Sarcopterygii ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b #22 Tetrapoda ANCESTRAL SPECIES 4 ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000173435 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00390000001793 ENSGT00940000159468 Amniota ANCESTRAL SPECIES 1 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT01050000247847 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000173435 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Mammalia ANCESTRAL SPECIES 38 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT01050000247847 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000173435 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Theria ANCESTRAL SPECIES 35 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT01050000247847 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000173435 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Eutheria DUPLICATION Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES 2 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT01050000247847 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000173435 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Boreoeutheria ANCESTRAL SPECIES 15 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000173435 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Euarchontoglires ANCESTRAL SPECIES 15 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000173435 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Euarchontoglires_A ANCESTRAL SPECIES 14 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Glires ANCESTRAL SPECIES 13 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Rodentia ANCESTRAL SPECIES 15 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.v #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Rodentia_B ANCESTRAL SPECIES 14 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.v #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Myomorpha ANCESTRAL SPECIES 24 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.v #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Muroidea ANCESTRAL SPECIES 21 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.v #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Muroidea_A ANCESTRAL SPECIES 24 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.v #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Murinae ANCESTRAL SPECIES 8 ENSGT00940000159468 ENSGT00390000001793 ENSGT00940000162396 ENSGT00940000161652 #8 ENSGT00940000154030.a.b #9 ENSGT00390000013670 #10 ENSGT00940000157701 #11 ENSGT00940000156464 #12 ENSGT00940000156714 #14 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00390000013305.a.a.v #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01060000248676 ENSGT00940000154645.A #28 ENSGT00950000182995.e.a.a.a #30 ENSGT00390000007900 #32 ENSGT00390000004263.b #33 ENSGT00940000155646 #34 ENSGT00940000160213 #35 ENSGT00940000154459.B #36 ENSGT00940000153916.B #37 ENSGT01030000234517.D Rat MODERN SPECIES 16 ENSRNOG00000068283 #7 Sox11 (ENSRNOG00000030034) #8 Cmpk2 (ENSRNOG00000007690) #9 Rsad2 (ENSRNOG00000007539) #10 Rnf144a (ENSRNOG00000007370) #11 Id2 (ENSRNOG00000007237) #12 LOC120093241 (ENSRNOG00000062523) #13 Kidins220 (ENSRNOG00000023176) #14 Mboat2 (ENSRNOG00000061050) #15 Rrm2 (ENSRNOG00000054286) #16 Cys1 (ENSRNOG00000058891) #17 Klf11 (ENSRNOG00000054259) #18 Grhl1 (ENSRNOG00000054989) #19 Rbm34-ps1 (ENSRNOG00000065550) #20 Taf1b (ENSRNOG00000061415) #21 Ywhaq (ENSRNOG00000051650) #22 Adam17 (ENSRNOG00000060694) #23 Iah1 (ENSRNOG00000060853) #24 Cpsf3 (ENSRNOG00000052418) #25 Itgb1bp1 (ENSRNOG00000059402) #26 Asap2 (ENSRNOG00000061519) #27 Hpcal1 (ENSRNOG00000005492) #28 LOC120093238 (ENSRNOG00000032523) #29 Odc1 (ENSRNOG00000005424) #30 AABR07063703.1 (ENSRNOG00000046279) #31 Nol10 (ENSRNOG00000005344) #32 Atp6v1c2 (ENSRNOG00000050553) #33 Pdia6 (ENSRNOG00000050197) #34 Kcnf1 (ENSRNOG00000024310) #35 C6h2orf50 (ENSRNOG00000024338) #36 Slc66a3 (ENSRNOG00000005126) #37 Mus ANCESTRAL SPECIES 10 ENSGT00940000159468 ENSGT00390000001793 ENSGT00940000162396 ENSGT00940000161652 #8 ENSGT00940000154030.a.b #9 ENSGT00390000013670 #10 ENSGT00940000157701 #11 ENSGT00940000156464 #12 ENSGT00940000156714 #14 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00390000013305.a.a.v #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01060000248676 ENSGT00950000182995.e.a.a.a #30 ENSGT00390000007900 #32 ENSGT00390000004263.b #33 ENSGT00940000155646 #34 ENSGT00940000160213 #35 ENSGT00940000154459.B #36 ENSGT00940000153916.B #37 ENSGT01030000234517.D ENSGT00940000155734 Shrew mouse MODERN SPECIES 20 Colec11 (MGP_PahariEiJ_G0029416) Allc (MGP_PahariEiJ_G0029415) MGP_PahariEiJ_G0029414 Sox11 (MGP_PahariEiJ_G0029413) #8 Cmpk2 (MGP_PahariEiJ_G0029412) #9 Rsad2 (MGP_PahariEiJ_G0029411) #10 Rnf144a (MGP_PahariEiJ_G0029410) #11 MGP_PahariEiJ_G0029409 #12 Kidins220 (MGP_PahariEiJ_G0029408) #14 Mboat2 (MGP_PahariEiJ_G0029407) #15 MGP_PahariEiJ_G0029405 #16 Cys1 (MGP_PahariEiJ_G0029404) #17 Klf11 (MGP_PahariEiJ_G0029403) #18 MGP_PahariEiJ_G0029402 #19 MGP_PahariEiJ_G0029401 #21 MGP_PahariEiJ_G0029400 #22 Adam17 (MGP_PahariEiJ_G0029399) #23 Iah1 (MGP_PahariEiJ_G0029398) #24 Cpsf3 (MGP_PahariEiJ_G0029397) #25 Itgb1bp1 (MGP_PahariEiJ_G0029396) #26 Asap2 (MGP_PahariEiJ_G0029395) #27 Odc1 (MGP_PahariEiJ_G0029394) #30 Nol10 (MGP_PahariEiJ_G0029393) #32 Atp6v1c2 (MGP_PahariEiJ_G0029392) #33 Pdia6 (MGP_PahariEiJ_G0029391) #34 Kcnf1 (MGP_PahariEiJ_G0029390) #35 MGP_PahariEiJ_G0029389 #36 Pqlc3 (MGP_PahariEiJ_G0029388) #37 Rock2 (MGP_PahariEiJ_G0029387) MGP_PahariEiJ_G0029386 E2f6 (MGP_PahariEiJ_G0029385) Mus_A ANCESTRAL SPECIES 17 ENSGT00940000159468 ENSGT00390000001793 ENSGT00940000162396 ENSGT00940000161652 #8 ENSGT00940000154030.a.b #9 ENSGT00390000013670 #10 ENSGT00940000157701 #11 ENSGT00940000156464 #12 ENSGT00940000156714 #14 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00390000013305.a.a.v #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01060000248676 ENSGT00950000182995.e.a.a.a.e #30 ENSGT00390000007900 #32 ENSGT00390000004263.b #33 ENSGT00940000155646 #34 ENSGT00940000160213 #35 ENSGT00940000154459.B #36 ENSGT00940000153916.B.c #37 ENSGT01030000234517.D ENSGT00940000155734 Ryukyu mouse MODERN SPECIES 3 Colec11 (MGP_CAROLIEiJ_G0017658) Allc (MGP_CAROLIEiJ_G0017657) MGP_CAROLIEiJ_G0017656 Sox11 (MGP_CAROLIEiJ_G0017655) #8 Cmpk2 (MGP_CAROLIEiJ_G0017654) #9 Rsad2 (MGP_CAROLIEiJ_G0017653) #10 Rnf144a (MGP_CAROLIEiJ_G0017652) #11 MGP_CAROLIEiJ_G0017651 #12 Kidins220 (MGP_CAROLIEiJ_G0017650) #14 Mboat2 (MGP_CAROLIEiJ_G0017649) #15 Rrm2 (MGP_CAROLIEiJ_G0017648) #16 Cys1 (MGP_CAROLIEiJ_G0017647) #17 Klf11 (MGP_CAROLIEiJ_G0017646) #18 Grhl1 (MGP_CAROLIEiJ_G0017645) #19 Taf1b (MGP_CAROLIEiJ_G0017644) #21 Ywhaq (MGP_CAROLIEiJ_G0017643) #22 Adam17 (MGP_CAROLIEiJ_G0017642) #23 Iah1 (MGP_CAROLIEiJ_G0017641) #24 Cpsf3 (MGP_CAROLIEiJ_G0017640) #25 Itgb1bp1 (MGP_CAROLIEiJ_G0017639) #26 Asap2 (MGP_CAROLIEiJ_G0017638) #27 Odc1 (MGP_CAROLIEiJ_G0017637) #30 Nol10 (MGP_CAROLIEiJ_G0017636) #32 Atp6v1c2 (MGP_CAROLIEiJ_G0017635) #33 Pdia6 (MGP_CAROLIEiJ_G0017634) #34 Kcnf1 (MGP_CAROLIEiJ_G0017633) #35 MGP_CAROLIEiJ_G0017632 #36 MGP_CAROLIEiJ_G0017631 #37 Rock2 (MGP_CAROLIEiJ_G0017630) MGP_CAROLIEiJ_G0017629 Greb1 (MGP_CAROLIEiJ_G0017628) Mus_B ANCESTRAL SPECIES 17 ENSGT00940000159468 ENSGT00390000001793 ENSGT00940000162396 ENSGT00940000161652 #8 ENSGT00940000154030.a.b #9 ENSGT00390000013670 #10 ENSGT00940000157701 #11 ENSGT00940000156464 #12 ENSGT00940000156714 #14 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00390000013305.a.a.v #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01060000248676 ENSGT00940000154645.A #28 ENSGT00950000182995.e.a.a.a.e #30 ENSGT00390000007900 #32 ENSGT00390000004263.b #33 ENSGT00940000155646 #34 ENSGT00940000160213 #35 ENSGT00940000154459.B #36 ENSGT00940000153916.B.c #37 ENSGT01030000234517.D Mouse MODERN SPECIES 3 Allc (ENSMUSG00000020636) Dcdc2c (ENSMUSG00000020633) Sox11 (ENSMUSG00000063632) #8 Cmpk2 (ENSMUSG00000020638) #9 Rsad2 (ENSMUSG00000020641) #10 Rnf144a (ENSMUSG00000020642) #11 Id2 (ENSMUSG00000020644) #12 Kidins220 (ENSMUSG00000036333) #14 Mboat2 (ENSMUSG00000020646) #15 Rrm2 (ENSMUSG00000020649) #16 Cys1 (ENSMUSG00000062563) #17 Klf11 (ENSMUSG00000020653) #18 Grhl1 (ENSMUSG00000020656) #19 Taf1b (ENSMUSG00000059669) #21 9030624G23Rik (ENSMUSG00000073158) Ywhaq (ENSMUSG00000076432) #22 Adam17 (ENSMUSG00000052593) #23 Iah1 (ENSMUSG00000062054) #24 Cpsf3 (ENSMUSG00000054309) #25 Itgb1bp1 (ENSMUSG00000062352) #26 Asap2 (ENSMUSG00000052632) #27 Gm21863 (ENSMUSG00000095470) 5730507C01Rik (ENSMUSG00000073197) Hpcal1 (ENSMUSG00000071379) #28 Odc1 (ENSMUSG00000011179) #30 Nol10 (ENSMUSG00000061458) #32 Atp6v1c2 (ENSMUSG00000020566) #33 Pdia6 (ENSMUSG00000020571) #34 Kcnf1 (ENSMUSG00000051726) #35 2410004P03Rik (ENSMUSG00000071398) Pqlc3 (ENSMUSG00000045679) #37 Mus_C ANCESTRAL SPECIES 11 ENSGT00940000159468 ENSGT00390000001793 ENSGT00940000162396 ENSGT00940000161652 #8 ENSGT00940000154030.a.b #9 ENSGT00390000013670 #10 ENSGT00940000157701 #11 ENSGT00940000156464 #12 ENSGT00940000156714 #14 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00390000013305.a.a.v #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00940000154645.A #28 ENSGT00950000182995.e.a.a.a.e #30 ENSGT00390000007900 #32 ENSGT00390000004263.b #33 ENSGT00940000155646 #34 ENSGT00940000160213 #35 ENSGT00940000154459.B #36 ENSGT00940000153916.B.c #37 ENSGT01030000234517.D ENSGT00940000155734 spretus MODERN SPECIES 3 Allc (MGP_SPRETEiJ_G0018499) MGP_SPRETEiJ_G0018498 Sox11 (MGP_SPRETEiJ_G0018497) #8 Cmpk2 (MGP_SPRETEiJ_G0018496) #9 Rsad2 (MGP_SPRETEiJ_G0018495) #10 Rnf144a (MGP_SPRETEiJ_G0018494) #11 MGP_SPRETEiJ_G0018493 #12 Kidins220 (MGP_SPRETEiJ_G0018492) #14 Mboat2 (MGP_SPRETEiJ_G0018491) #15 Rrm2 (MGP_SPRETEiJ_G0018490) #16 Cys1 (MGP_SPRETEiJ_G0018489) #17 Klf11 (MGP_SPRETEiJ_G0018488) #18 Grhl1 (MGP_SPRETEiJ_G0018487) #19 MGP_SPRETEiJ_G0018486 Taf1b (MGP_SPRETEiJ_G0018485) #21 Ywhaq (MGP_SPRETEiJ_G0018484) #22 Adam17 (MGP_SPRETEiJ_G0018483) #23 Iah1 (MGP_SPRETEiJ_G0018482) #24 Cpsf3 (MGP_SPRETEiJ_G0018481) #25 Itgb1bp1 (MGP_SPRETEiJ_G0018480) #26 Asap2 (MGP_SPRETEiJ_G0018479) #27 Nol10 (MGP_SPRETEiJ_G0018478) #32 Atp6v1c2 (MGP_SPRETEiJ_G0018477) #33 Pdia6 (MGP_SPRETEiJ_G0018476) #34 Kcnf1 (MGP_SPRETEiJ_G0018475) #35 2410004P03Rik (MGP_SPRETEiJ_G0018474) MGP_SPRETEiJ_G0018473 #37 Rock2 (MGP_SPRETEiJ_G0018472) E2f6 (MGP_SPRETEiJ_G0018471) Greb1 (MGP_SPRETEiJ_G0018470) Ntsr2 (MGP_SPRETEiJ_G0018469) Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 1019 ENSMSIG00000000706 #22 Steppe mouse MODERN SPECIES 2460 Ywhaq (ENSMSIG00000022246) #22 Adam17 (ENSMSIG00000022289) #23 Iah1 (ENSMSIG00000022381) #24 Cpsf3 (ENSMSIG00000022405) #25 Itgb1bp1 (ENSMSIG00000022470) #26 Asap2 (ENSMSIG00000022503) #27 Cricetidae ANCESTRAL SPECIES 24 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.v #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Cricetidae_B ANCESTRAL SPECIES 43 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.v #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Prairie vole MODERN SPECIES 93 Pqlc3 (ENSMOCG00000020689) #37 2410004P03Rik (ENSMOCG00000005186) Kcnf1 (ENSMOCG00000002002) #35 Pdia6 (ENSMOCG00000014991) #34 Atp6v1c2 (ENSMOCG00000019580) #33 Nol10 (ENSMOCG00000021564) #32 ENSMOCG00000010314 #30 Hpcal1 (ENSMOCG00000014411) #28 ENSMOCG00000010909 #16 ENSMOCG00000018114 #16 Cys1 (ENSMOCG00000017656) #17 ENSMOCG00000014995 #18 ENSMOCG00000003070 Grhl1 (ENSMOCG00000019210) #19 Taf1b (ENSMOCG00000005916) #21 Ywhaq (ENSMOCG00000020316) #22 Adam17 (ENSMOCG00000010700) #23 Iah1 (ENSMOCG00000017872) #24 Cpsf3 (ENSMOCG00000020067) #25 Itgb1bp1 (ENSMOCG00000017072) #26 Asap2 (ENSMOCG00000019749) #27 Mboat2 (ENSMOCG00000021674) #15 Kidins220 (ENSMOCG00000011232) #14 Id2 (ENSMOCG00000002908) #12 ENSMOCG00000012398 Rnf144a (ENSMOCG00000000314) #11 ENSMOCG00000020673 #10 Cmpk2 (ENSMOCG00000000423) #9 Cricetinae ANCESTRAL SPECIES ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.g #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.v #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 701 Rrad (ENSMAUG00000007171) Cdh16 (ENSMAUG00000000808) Pdp2 (ENSMAUG00000013617) Car7 (ENSMAUG00000012285) Nae1 (ENSMAUG00000013882) Terb1 (ENSMAUG00000010324) Dync1li2 (ENSMAUG00000011837) Cmtm4 (ENSMAUG00000011070) Cmtm3 (ENSMAUG00000010935) ENSMAUG00000010482 Cklf (ENSMAUG00000019904) Tk2 (ENSMAUG00000014656) Bean1 (ENSMAUG00000018813) Cdh5 (ENSMAUG00000016489) Cdh11 (ENSMAUG00000015471) ENSMAUG00000017111 #22 ENSMAUG00000015943 ENSMAUG00000014350 ENSMAUG00000013353 Cdh8 (ENSMAUG00000000265) ENSMAUG00000012456 Got2 (ENSMAUG00000018221) Slc38a7 (ENSMAUG00000016252) ENSMAUG00000014000 ENSMAUG00000009731 Setd6 (ENSMAUG00000004853) Ndrg4 (ENSMAUG00000016805) Gins3 (ENSMAUG00000008574) Prss54 (ENSMAUG00000000894) Ccdc113 (ENSMAUG00000000235) Csnk2a2 (ENSMAUG00000008176) Golden Hamster MODERN SPECIES 775 Crot (ENSMAUG00000005063) Abcb4 (ENSMAUG00000009073) Abcb1b (ENSMAUG00000010546) Abcb1a (ENSMAUG00000012772) Rundc3b (ENSMAUG00000015112) Slc25a40 (ENSMAUG00000017261) Dbf4 (ENSMAUG00000017766) ENSMAUG00000000136 ENSMAUG00000000587 Sri (ENSMAUG00000009814) Steap4 (ENSMAUG00000011607) ENSMAUG00000009234 #22 Zfp804b (ENSMAUG00000013056) Tex47 (ENSMAUG00000016230) Steap1 (ENSMAUG00000015469) Steap2 (ENSMAUG00000001256) Cfap69 (ENSMAUG00000008916) Gtpbp10 (ENSMAUG00000012555) Cldn12 (ENSMAUG00000012515) Pttg1ip2 (ENSMAUG00000015458) ENSMAUG00000014113 Cdk14 (ENSMAUG00000012227) Fzd1 (ENSMAUG00000000455) ENSMAUG00000006025 Chinese hamster chok1gshd MODERN SPECIES 229 E2f6 (ENSCGRG00001013963) Rock2 (ENSCGRG00001016725) Pqlc3 (ENSCGRG00001018327) #37 2410004P03Rik (ENSCGRG00001003389) Kcnf1 (ENSCGRG00001014274) #35 Pdia6 (ENSCGRG00001017472) #34 Atp6v1c2 (ENSCGRG00001021615) #33 Nol10 (ENSCGRG00001009928) #32 ENSCGRG00001015979 #30 Hpcal1 (ENSCGRG00001023170) #28 Rrm2 (ENSCGRG00001007841) #16 Cys1 (ENSCGRG00001013951) #17 Klf11 (ENSCGRG00001018478) #18 Grhl1 (ENSCGRG00001024970) #19 ENSCGRG00001018516 #21 Ywhaq (ENSCGRG00001024724) #22 Adam17 (ENSCGRG00001024922) #23 Iah1 (ENSCGRG00001019624) #24 Cpsf3 (ENSCGRG00001013134) #25 Itgb1bp1 (ENSCGRG00001000664) #26 Asap2 (ENSCGRG00001022680) #27 Mboat2 (ENSCGRG00001015841) #15 Kidins220 (ENSCGRG00001016681) #14 Id2 (ENSCGRG00001023029) #12 ENSCGRG00001023880 Rnf144a (ENSCGRG00001007035) #11 Rsad2 (ENSCGRG00001014337) #10 Cmpk2 (ENSCGRG00001018716) #9 Sox11 (ENSCGRG00001007958) #8 ENSCGRG00001022074 Allc (ENSCGRG00001009626) Upper Galilee mountains blind mole rat MODERN SPECIES 1517 Pqlc3 (ENSNGAG00000009941) #37 ENSNGAG00000011266 #36 Kcnf1 (ENSNGAG00000017575) #35 Pdia6 (ENSNGAG00000014585) #34 Atp6v1c2 (ENSNGAG00000000867) #33 Nol10 (ENSNGAG00000015506) #32 ENSNGAG00000019061 ENSNGAG00000001599 #30 Hpcal1 (ENSNGAG00000012465) #28 Rrm2 (ENSNGAG00000013008) ##16 Cys1 (ENSNGAG00000015080) #17 Klf11 (ENSNGAG00000018758) #18 Grhl1 (ENSNGAG00000004562) #19 Taf1b (ENSNGAG00000010048) #21 ENSNGAG00000015636 Ywhaq (ENSNGAG00000012388) #22 Adam17 (ENSNGAG00000016571) #23 Iah1 (ENSNGAG00000017153) #24 Cpsf3 (ENSNGAG00000019836) #25 Itgb1bp1 (ENSNGAG00000015478) #26 Asap2 (ENSNGAG00000020450) #27 Mboat2 (ENSNGAG00000004975) #15 Kidins220 (ENSNGAG00000012753) #14 Id2 (ENSNGAG00000018053) #12 Rnf144a (ENSNGAG00000018727) #11 Rsad2 (ENSNGAG00000020530) #10 Cmpk2 (ENSNGAG00000020998) #9 Sox11 (ENSNGAG00000016772) #8 ENSNGAG00000017946 ENSNGAG00000002422 Allc (ENSNGAG00000004596) Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 94 ENSJJAG00000020212 Nek6 (ENSJJAG00000015974) Lhx2 (ENSJJAG00000015440) ENSJJAG00000018640 Crb2 (ENSJJAG00000019604) Strbp (ENSJJAG00000008449) Gpr21 (ENSJJAG00000010982) Rabgap1 (ENSJJAG00000014056) ENSJJAG00000002859 Zbtb6 (ENSJJAG00000007276) Rc3h2 (ENSJJAG00000022376) Pdcl (ENSJJAG00000011208) ENSJJAG00000024210 ENSJJAG00000011225 Or1q1 (ENSJJAG00000007797) ENSJJAG00000002221 #22 Or1l8 (ENSJJAG00000009930) Or1j1 (ENSJJAG00000004843) Or1j4 (ENSJJAG00000016748) Or1j21 (ENSJJAG00000007756) Or1j19 (ENSJJAG00000004355) ENSJJAG00000005426 Ptgs1 (ENSJJAG00000019097) Mrrf (ENSJJAG00000012872) ENSJJAG00000009581 Lhx6 (ENSJJAG00000020849) Morn5 (ENSJJAG00000016063) Ndufa8 (ENSJJAG00000010110) ENSJJAG00000002583 Dab2ip (ENSJJAG00000002531) ENSJJAG00000019498 Lesser Egyptian jerboa MODERN SPECIES 44 Pkib (ENSJJAG00000001584) Fabp7 (ENSJJAG00000004827) Smpdl3a (ENSJJAG00000006023) Clvs2 (ENSJJAG00000024228) ENSJJAG00000018586 ENSJJAG00000004400 Nkain2 (ENSJJAG00000010837) Rnf217 (ENSJJAG00000006629) Tpd52l1 (ENSJJAG00000023918) Hddc2 (ENSJJAG00000002843) Hey2 (ENSJJAG00000003822) ENSJJAG00000023842 ENSJJAG00000014075 ENSJJAG00000017244 ENSJJAG00000021916 ENSJJAG00000017240 #22 ENSJJAG00000014021 Cenpw (ENSJJAG00000018449) ENSJJAG00000003701 Rspo3 (ENSJJAG00000012622) ENSJJAG00000012090 Echdc1 (ENSJJAG00000016176) 9330159F19Rik (ENSJJAG00000023852) Soga3 (ENSJJAG00000021364) 2310057J18Rik (ENSJJAG00000010685) ENSJJAG00000021911 Ptprk (ENSJJAG00000023465) ENSJJAG00000023671 Lama2 (ENSJJAG00000022172) Arhgap18 (ENSJJAG00000021567) ENSJJAG00000004475 Lesser Egyptian jerboa MODERN SPECIES 74 Slc1a4 (ENSJJAG00000002418) Cep68 (ENSJJAG00000016421) Rab1a (ENSJJAG00000014396) Actr2 (ENSJJAG00000008642) Spred2 (ENSJJAG00000020977) Meis1 (ENSJJAG00000015459) ENSJJAG00000011226 ENSJJAG00000021064 ENSJJAG00000023186 Dnaaf10 (ENSJJAG00000019935) Pno1 (ENSJJAG00000022862) Ppp3r1 (ENSJJAG00000016869) Cnrip1 (ENSJJAG00000016204) Plek (ENSJJAG00000005757) ENSJJAG00000011210 Ywhaq (ENSJJAG00000008194) #22 Adam17 (ENSJJAG00000020057) #23 Iah1 (ENSJJAG00000015466) #24 Cpsf3 (ENSJJAG00000023415) #25 Itgb1bp1 (ENSJJAG00000022716) #26 Asap2 (ENSJJAG00000001039) #27 Mboat2 (ENSJJAG00000011516) #15 Kidins220 (ENSJJAG00000015011) #14 Hnrnpll (ENSJJAG00000024192) Galm (ENSJJAG00000023585) ENSJJAG00000023079 Ttc39d (ENSJJAG00000012034) Gemin6 (ENSJJAG00000021310) ENSJJAG00000024348 Dhx57 (ENSJJAG00000023202) ENSJJAG00000018800 Kangaroo rat MODERN SPECIES 455 Cyyr1 (ENSDORG00000006295) App (ENSDORG00000015018) Gabpa (ENSDORG00000014904) Atp5j (ENSDORG00000024915) Jam2 (ENSDORG00000014902) Mrpl39 (ENSDORG00000014900) ENSDORG00000029479 Ncam2 (ENSDORG00000010760) Tmprss15 (ENSDORG00000006666) Chodl (ENSDORG00000030183) D16Ertd472e (ENSDORG00000006465) ENSDORG00000029013 #22 Btg3 (ENSDORG00000001828) Cxadr (ENSDORG00000000790) Usp25 (ENSDORG00000010279) Nrip1 (ENSDORG00000025527) Rodentia_A ANCESTRAL SPECIES 14 ENSGT00940000155734.q ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.v #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Sciuridae ANCESTRAL SPECIES 16 ENSGT00940000155734.q ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.v.b #16 ENSGT00390000016845 #17 ENSGT00940000155982.b #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Eurasian red squirrel MODERN SPECIES 5 SLC66A3 (ENSSVLG00005018165) #37 C2orf50 (ENSSVLG00005018240) #36 KCNF1 (ENSSVLG00005018274) #35 PDIA6 (ENSSVLG00005018305) #34 ATP6V1C2 (ENSSVLG00005018543) #33 ENSSVLG00005018931 NOL10 (ENSSVLG00005018977) #32 ENSSVLG00005019056 #30 HPCAL1 (ENSSVLG00005019176) #28 ENSSVLG00005019233 #16 CYS1 (ENSSVLG00005019295) #17 KLF11 (ENSSVLG00005019337) #18 ENSSVLG00005019438 #19 ENSSVLG00005019695 #21 ENSSVLG00005019881 YWHAQ (ENSSVLG00005019899) #22 ADAM17 (ENSSVLG00005019936) #23 IAH1 (ENSSVLG00005019997) #24 CPSF3 (ENSSVLG00005020098) #25 ITGB1BP1 (ENSSVLG00005020179) #26 ASAP2 (ENSSVLG00005020310) #27 MBOAT2 (ENSSVLG00005020748) #15 KIDINS220 (ENSSVLG00005020790) #14 ID2 (ENSSVLG00005020830) #12 RNF144A (ENSSVLG00005020868) #11 RSAD2 (ENSSVLG00005020911) #10 CMPK2 (ENSSVLG00005020981) #9 SOX11 (ENSSVLG00005021089) #8 DCDC2C (ENSSVLG00005021143) ALLC (ENSSVLG00005021266) COLEC11 (ENSSVLG00005021395) Marmotini ANCESTRAL SPECIES 14 ENSGT00940000155734.q ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.v.b #16 ENSGT00390000016845 #17 ENSGT00940000155982.b #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069.k.a #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Marmotini_b ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.a #22 Squirrel MODERN SPECIES 71 OIP5 (ENSSTOG00000008306) NUSAP1 (ENSSTOG00000008314) ENSSTOG00000022272 NDUFAF1 (ENSSTOG00000008333) RTF1 (ENSSTOG00000008346) ITPKA (ENSSTOG00000008378) LTK (ENSSTOG00000008387) RPAP1 (ENSSTOG00000015342) TYRO3 (ENSSTOG00000015360) MGA (ENSSTOG00000000653) MAPKBP1 (ENSSTOG00000000672) JMJD7 (ENSSTOG00000027236) PLA2G4B (ENSSTOG00000000680) ENSSTOG00000000686 EHD4 (ENSSTOG00000000719) ENSSTOG00000031314 #22 PLA2G4E (ENSSTOG00000014164) PLA2G4D (ENSSTOG00000014347) PLA2G4F (ENSSTOG00000014358) VPS39 (ENSSTOG00000014367) TMEM87A (ENSSTOG00000000767) GANC (ENSSTOG00000000774) CAPN3 (ENSSTOG00000021092) ENSSTOG00000029337 SNAP23 (ENSSTOG00000006183) LRRC57 (ENSSTOG00000006192) HAUS2 (ENSSTOG00000006207) ENSSTOG00000024994 ENSSTOG00000034368 CDAN1 (ENSSTOG00000006305) TTBK2 (ENSSTOG00000027361) Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 7 EXD1 (ENSMMMG00000020624) CHP1 (ENSMMMG00000020600) OIP5 (ENSMMMG00000020593) NUSAP1 (ENSMMMG00000020560) NDUFAF1 (ENSMMMG00000020553) ENSMMMG00000020547 RTF1 (ENSMMMG00000020534) ITPKA (ENSMMMG00000020517) ENSMMMG00000020501 RPAP1 (ENSMMMG00000020214) TYRO3 (ENSMMMG00000020188) MGA (ENSMMMG00000020048) MAPKBP1 (ENSMMMG00000019985) JMJD7 (ENSMMMG00000019970) PLA2G4B (ENSMMMG00000019946) ENSMMMG00000019865 #22 ENSMMMG00000019859 EHD4 (ENSMMMG00000019857) PLA2G4E (ENSMMMG00000019838) PLA2G4D (ENSMMMG00000019810) ENSMMMG00000019808 PLA2G4F (ENSMMMG00000019798) VPS39 (ENSMMMG00000019741) TMEM87A (ENSMMMG00000019693) GANC (ENSMMMG00000019671) CAPN3 (ENSMMMG00000019416) ZNF106 (ENSMMMG00000019332) ENSMMMG00000019319 SNAP23 (ENSMMMG00000019308) LRRC57 (ENSMMMG00000019283) HAUS2 (ENSMMMG00000019271) Alpin marmot MODERN SPECIES 6 E2F6 (ENSMMMG00000022544) ROCK2 (ENSMMMG00000022550) SLC66A3 (ENSMMMG00000022562) #37 C2orf50 (ENSMMMG00000022565) #36 KCNF1 (ENSMMMG00000022573) #35 PDIA6 (ENSMMMG00000022575) #34 ATP6V1C2 (ENSMMMG00000022583) #33 NOL10 (ENSMMMG00000022607) #32 ODC1 (ENSMMMG00000022615) #30 HPCAL1 (ENSMMMG00000022618) #28 ENSMMMG00000022624 #16 ENSMMMG00000022625 #17 KLF11 (ENSMMMG00000022629) #18 GRHL1 (ENSMMMG00000022631) #19 TAF1B (ENSMMMG00000022638) #21 YWHAQ (ENSMMMG00000022652) #22 ADAM17 (ENSMMMG00000022654) #23 IAH1 (ENSMMMG00000022658) #24 CPSF3 (ENSMMMG00000022663) #25 ITGB1BP1 (ENSMMMG00000022669) #26 ASAP2 (ENSMMMG00000022671) #27 MBOAT2 (ENSMMMG00000022735) #15 KIDINS220 (ENSMMMG00000022748) #14 ID2 (ENSMMMG00000022803) #12 RNF144A (ENSMMMG00000022809) #11 RSAD2 (ENSMMMG00000022810) #10 CMPK2 (ENSMMMG00000022812) #9 SOX11 (ENSMMMG00000022819) #8 ENSMMMG00000022822 DCDC2C (ENSMMMG00000022831) ALLC (ENSMMMG00000022836) Hystricomorpha ANCESTRAL SPECIES 64 ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.v #16 ENSGT00390000016845 #17 ENSGT00390000013305.a.a.u.a ##16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.b ##22 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 Naked mole-rat female MODERN SPECIES 19 SLC66A3 (ENSHGLG00000001582) #37 ENSHGLG00000046079 ENSHGLG00000004114 ENSHGLG00000000910 NTSR2 (ENSHGLG00000048775) LPIN1 (ENSHGLG00000000436) TRIB2 (ENSHGLG00000050246) ENSHGLG00000001922 ENSHGLG00000005931 LRATD1 (ENSHGLG00000004468) ENSHGLG00000047840 NBAS (ENSHGLG00000000885) ENSHGLG00000049886 ENSHGLG00000049295 ENSHGLG00000000328 ENSHGLG00000000473 #22 ADAM17 (ENSHGLG00000000502) #23 ENSHGLG00000000512 #24 CPSF3 (ENSHGLG00000000666) #25 ITGB1BP1 (ENSHGLG00000000877) #26 ENSHGLG00000000974 #27 ENSHGLG00000040434 ENSHGLG00000033649 ENSHGLG00000044591 ENSHGLG00000049015 ENSHGLG00000042745 ENSHGLG00000032848 ENSHGLG00000036700 ENSHGLG00000040838 ENSHGLG00000040330 ENSHGLG00000043794 Hystricomorpha_a ANCESTRAL SPECIES 70 ENSGT00940000155734.q ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.v #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.b ##22 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00940000157666 ENSGT00940000155671 ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000003466 ENSGT00390000014122.i.b.a.b ENSGT00940000159468 ENSGT00390000001793 ENSGT00940000162396 Hystricomorpha_b ANCESTRAL SPECIES 91 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000170593 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.u.a ##16 ENSGT00390000013305.a.a.v #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.b ##22 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00940000157666 ENSGT00940000155671 ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000003466 ENSGT00390000014122.i.b.a.b ENSGT00940000159468 ENSGT00390000001793 ENSGT00940000162396 Degu MODERN SPECIES 192 ENSODEG00000001238 ENSODEG00000001198 ENSODEG00000001162 ENSODEG00000000987 #37 ENSODEG00000000975 ENSODEG00000000842 #34 ATP6V1C2 (ENSODEG00000000754) #33 NOL10 (ENSODEG00000000508) #32 ODC1 (ENSODEG00000000437) #30 ENSODEG00000002415 #28 RRM2 (ENSODEG00000002317) ##16 ENSODEG00000002288 #18 GRHL1 (ENSODEG00000002151) #19 TAF1B (ENSODEG00000002052) #21 ENSODEG00000001535 YWHAQ (ENSODEG00000001504) #22 ADAM17 (ENSODEG00000003472) #23 IAH1 (ENSODEG00000003362) #24 CPSF3 (ENSODEG00000003129) #25 ENSODEG00000003101 #26 ENSODEG00000018909 ASAP2 (ENSODEG00000001497) #27 PXDN (ENSODEG00000001228) ENSODEG00000018668 MYT1L (ENSODEG00000001544) Guinea pig MODERN SPECIES 75 MYCN (ENSCPOG00000020263) ENSCPOG00000012839 YWHAQ (ENSCPOG00000011321) #22 ADAM17 (ENSCPOG00000011313) #23 IAH1 (ENSCPOG00000011308) #24 CPSF3 (ENSCPOG00000011299) #25 ITGB1BP1 (ENSCPOG00000010293) #26 ASAP2 (ENSCPOG00000010278) #27 PXDN (ENSCPOG00000011199) MYT1L (ENSCPOG00000013246) EIPR1 (ENSCPOG00000005737) TRAPPC12 (ENSCPOG00000005749) ADI1 (ENSCPOG00000027219) RNASEH1 (ENSCPOG00000022278) RPS7 (ENSCPOG00000009795) COLEC11 (ENSCPOG00000032858) ALLC (ENSCPOG00000014255) ENSCPOG00000022309 Lagomorpha ANCESTRAL SPECIES 233 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.b ##22 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 Rabbit MODERN SPECIES 536 KLF11 (ENSOCUG00000003809) #18 GRHL1 (ENSOCUG00000017717) #19 TAF1B (ENSOCUG00000005643) #21 ENSOCUG00000028159 CPSF3 (ENSOCUG00000003728) #25 YWHAQ (ENSOCUG00000010482) #22 ADAM17 (ENSOCUG00000010474) #23 IAH1 (ENSOCUG00000026669) #24 ENSOCUG00000003726 #26 ASAP2 (ENSOCUG00000003719) #27 MBOAT2 (ENSOCUG00000016985) #15 KIDINS220 (ENSOCUG00000003996) #14 Tree shrew MODERN SPECIES 4154 ENSTBEG00000010161 #22 DST (ENSTBEG00000010231) Primates ANCESTRAL SPECIES 14 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000173435 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Haplorrhini ANCESTRAL SPECIES 15 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Tarsier MODERN SPECIES 6758 YWHAQ (ENSTSYG00000031132) #22 ADAM17 (ENSTSYG00000008904) #23 IAH1 (ENSTSYG00000026191) #24 CPSF3 (ENSTSYG00000002967) #25 ITGB1BP1 (ENSTSYG00000014537) #26 ASAP2 (ENSTSYG00000014529) #27 ENSTSYG00000028357 Simiiformes ANCESTRAL SPECIES 14 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Catarrhini DUPLICATION Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 2 ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT00390000010687.a.a ENSGT00940000162334 ENSGT00940000157649 ENSGT01060000248594.f ENSGT00950000183097.a.b ENSGT00940000155714 ENSGT00670000098080 ENSGT01000000214434.A ENSGT00940000157909 ENSGT01030000234579.A.b.x ENSGT00940000160511 ENSGT00940000155481.u.b ENSGT01090000260040.b.b.b.b.a.a.a.a #22 ENSGT00940000155481.v ENSGT00940000158201 ENSGT00940000161449 ENSGT00390000016324 ENSGT01030000234629.C ENSGT00940000154369.d ENSGT00530000064220 ENSGT00950000183086.a.a.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00910000147082 ENSGT00910000147180 Hominoidea ANCESTRAL SPECIES 2 ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT00390000010687.a.a ENSGT00940000162334 ENSGT00940000157649 ENSGT01060000248594.f ENSGT00950000183097.a.b ENSGT00940000155714 ENSGT00670000098080 ENSGT01000000214434.A ENSGT00940000157909 ENSGT01030000234579.A.b.x ENSGT00940000160511 ENSGT00940000155481.u.b ENSGT01090000260040.b.b.b.b.a.a.a.a #22 ENSGT00940000155481.v ENSGT00940000158201 ENSGT00940000161449 ENSGT00390000016324 ENSGT01030000234629.C ENSGT00940000154369.d ENSGT00530000064220 ENSGT00950000183086.a.a.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00910000147082 ENSGT00910000147180 Hominidae ANCESTRAL SPECIES 2 ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT00390000010687.a.a ENSGT00940000162334 ENSGT00940000157649 ENSGT01060000248594.f ENSGT00950000183097.a.b ENSGT00940000155714 ENSGT00670000098080 ENSGT01000000214434.A ENSGT00940000157909 ENSGT01030000234579.A.b.x.a ENSGT00940000160511 ENSGT00940000155481.u.b ENSGT01090000260040.b.b.b.b.a.a.a.a #22 ENSGT00940000155481.v ENSGT00940000158201 ENSGT00940000161449 ENSGT00390000016324 ENSGT01030000234629.C ENSGT00940000154369.d ENSGT00530000064220 ENSGT00950000183086.a.a.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00910000147082 ENSGT00910000147180 Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT00390000010687.a.a ENSGT00940000162334 ENSGT00940000157649 ENSGT01060000248594.f ENSGT00950000183097.a.b ENSGT00940000155714 ENSGT00670000098080 ENSGT01000000214434.A ENSGT00940000157909 ENSGT01030000234579.A.b.x.a.a ENSGT00940000160511 ENSGT00940000155481.u.b ENSGT01090000260040.b.b.b.b.a.a.a.a #22 ENSGT00940000158201 ENSGT00940000161449 ENSGT00390000016324 ENSGT01030000234629.C ENSGT00940000154369.d ENSGT00530000064220 ENSGT00950000183086.a.a.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00910000147082 ENSGT00910000147180 ENSGT00390000007772.a.d Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT00390000010687.a.a ENSGT00940000162334 ENSGT00940000157649 ENSGT01060000248594.f ENSGT00950000183097.a.b ENSGT00940000155714 ENSGT00670000098080 ENSGT01000000214434.A ENSGT00940000157909 ENSGT01030000234579.A.b.x.a.a ENSGT00940000160511 ENSGT00940000155481.u.b ENSGT01090000260040.b.b.b.b.a.a.a.a #22 ENSGT00940000158201 ENSGT00940000161449 ENSGT00390000016324 ENSGT01030000234629.C ENSGT00940000154369.d ENSGT00530000064220 ENSGT00950000183086.a.a.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00910000147082 ENSGT00910000147180 ENSGT00390000007772.a.d Pan ANCESTRAL SPECIES 2 ENSGT00390000001347.vb.a.b.a.c.b ENSGT00940000160094 ENSGT00940000161292 ENSGT00390000010687.a.a ENSGT00940000162334 ENSGT00940000157649 ENSGT01060000248594.f ENSGT00950000183097.a.b ENSGT00940000155714 ENSGT00670000098080 ENSGT01000000214434.A ENSGT00940000157909 ENSGT01030000234579.A.b.x.a.a ENSGT00940000160511 ENSGT00940000155481.u.b ENSGT01090000260040.b.b.b.b.a.a.a.a #22 ENSGT00940000158201 ENSGT00940000161449 ENSGT00390000016324 ENSGT01030000234629.C ENSGT00940000154369.d ENSGT00530000064220 ENSGT00910000147512 ENSGT00950000183086.a.a.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095 ENSGT00910000147082 ENSGT00910000147180 Bonobo MODERN SPECIES 16 DIPK2A (ENSPPAG00000032010) ENSPPAG00000029017 SLC9A9 (ENSPPAG00000040325) ENSPPAG00000027945 PAQR9 (ENSPPAG00000009521) PCOLCE2 (ENSPPAG00000029354) TRPC1 (ENSPPAG00000004252) PLS1 (ENSPPAG00000042289) ATR (ENSPPAG00000042807) XRN1 (ENSPPAG00000010180) GK5 (ENSPPAG00000041760) TFDP2 (ENSPPAG00000031311) ENSPPAG00000038971 GRK7 (ENSPPAG00000037494) RNF7 (ENSPPAG00000036147) ENSPPAG00000042586 #22 RASA2 (ENSPPAG00000036725) PXYLP1 (ENSPPAG00000030848) SPSB4 (ENSPPAG00000029910) SLC25A36 (ENSPPAG00000030739) TRIM42 (ENSPPAG00000028240) ENSPPAG00000041953 CLSTN2 (ENSPPAG00000036614) ENSPPAG00000044006 ENSPPAG00000038038 RBP1 (ENSPPAG00000027809) RBP2 (ENSPPAG00000031530) COPB2 (ENSPPAG00000035821) MRPS22 (ENSPPAG00000025143) ENSPPAG00000027270 ENSPPAG00000003060 Chimpanzee MODERN SPECIES 16 ENSPTRG00000046723 SLC9A9 (ENSPTRG00000015491) CHST2 (ENSPTRG00000043559) U2SURP (ENSPTRG00000015489) PAQR9 (ENSPTRG00000015488) PCOLCE2 (ENSPTRG00000015486) TRPC1 (ENSPTRG00000015485) PLS1 (ENSPTRG00000015484) ATR (ENSPTRG00000015483) XRN1 (ENSPTRG00000015482) GK5 (ENSPTRG00000015480) TFDP2 (ENSPTRG00000015479) ATP1B3 (ENSPTRG00000015476) GRK7 (ENSPTRG00000052431) RNF7 (ENSPTRG00000039248) ENSPTRG00000046551 #22 RASA2 (ENSPTRG00000015472) ZBTB38 (ENSPTRG00000030108) PXYLP1 (ENSPTRG00000015469) SPSB4 (ENSPTRG00000015468) SLC25A36 (ENSPTRG00000015467) TRIM42 (ENSPTRG00000015465) ENSPTRG00000044651 CLSTN2 (ENSPTRG00000015463) ENSPTRG00000045045 NMNAT3 (ENSPTRG00000015462) RBP1 (ENSPTRG00000015461) RBP2 (ENSPTRG00000015460) COPB2 (ENSPTRG00000015459) MRPS22 (ENSPTRG00000015458) ENSPTRG00000045823 Gorilla MODERN SPECIES 16 DIPK2A (ENSGGOG00000015140) ENSGGOG00000042026 SLC9A9 (ENSGGOG00000034866) CHST2 (ENSGGOG00000010984) U2SURP (ENSGGOG00000005563) PCOLCE2 (ENSGGOG00000007872) TRPC1 (ENSGGOG00000026926) PLS1 (ENSGGOG00000002849) ATR (ENSGGOG00000008083) XRN1 (ENSGGOG00000008047) GK5 (ENSGGOG00000003657) TFDP2 (ENSGGOG00000007878) ATP1B3 (ENSGGOG00000027111) GRK7 (ENSGGOG00000013256) RNF7 (ENSGGOG00000001829) ENSGGOG00000037216 #22 RASA2 (ENSGGOG00000023738) PXYLP1 (ENSGGOG00000001732) SPSB4 (ENSGGOG00000011522) SLC25A36 (ENSGGOG00000024554) TRIM42 (ENSGGOG00000010587) CLSTN2 (ENSGGOG00000007929) ENSGGOG00000014226 NMNAT3 (ENSGGOG00000012306) RBP1 (ENSGGOG00000012301) RBP2 (ENSGGOG00000010274) ENSGGOG00000005780 ENSGGOG00000039588 MRPS22 (ENSGGOG00000014871) PRR23C (ENSGGOG00000043485) PRR23B (ENSGGOG00000036512) Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00940000161292 ENSGT00390000010687.a.a ENSGT00940000162334 ENSGT00940000157649 ENSGT01060000248594.f ENSGT00950000183097.a.b ENSGT00940000155714 ENSGT00670000098080 ENSGT00940000156225.d ENSGT01000000214434.A ENSGT00510000046985.i ENSGT00940000157909 ENSGT01030000234579.A.b.x ENSGT00940000160511 ENSGT00940000155481.u.b ENSGT01090000260040.b.b.b.b.a.a.a.a #22 ENSGT00940000158201 ENSGT00940000161449 ENSGT00390000016324 ENSGT01030000234629.C ENSGT00940000154369.d ENSGT00530000064220 ENSGT00950000183086.a.a.b ENSGT00950000183179.b.b ENSGT00940000159675 ENSGT00940000160165 ENSGT00900000141083.d ENSGT00390000006095.s ENSGT00910000147082 ENSGT00910000147180 ENSGT00390000007772.a.d Rhinopithecus ANCESTRAL SPECIES 1046 ENSGT00940000155481.u.b.a.b ENSGT01090000260040.b.b.b.b.a.a.a.a #22 Golden snub-nosed monkey MODERN SPECIES 2072 ENSRROG00000044183 ENSRROG00000043111 GK5 (ENSRROG00000029129) ENSRROG00000034265 TFDP2 (ENSRROG00000033835) ATP1B3 (ENSRROG00000030567) GRK7 (ENSRROG00000038885) ENSRROG00000030523 ENSRROG00000038402 #22 RASA2 (ENSRROG00000039486) ZBTB38 (ENSRROG00000009960) PXYLP1 (ENSRROG00000022663) SPSB4 (ENSRROG00000043824) ENSRROG00000028830 SLC25A36 (ENSRROG00000037476) TRIM42 (ENSRROG00000033793) Catarrhini ANCESTRAL SPECIES 141 ENSGT01090000260040.b.b.b.b.a.a.a.b #22 ENSGT00950000182907.a.b.b.b.tb Hominoidea ANCESTRAL SPECIES 10 ENSGT00390000012574 ENSGT00940000158241 ENSGT00390000003125.i.a ENSGT00390000010773 ENSGT00940000154672 ENSGT00390000009391.a ENSGT00390000012736 ENSGT00940000156418 ENSGT00940000156495 ENSGT00390000004697 ENSGT00940000160268 ENSGT00940000161766 ENSGT00940000161969 ENSGT00390000004179 ENSGT00940000159346 ENSGT01090000260040.b.b.b.b.a.a.a.b #22 ENSGT00950000182907.a.b.b.b.tb ENSGT00770000121728 ENSGT00950000183347 ENSGT00940000155329.b.a.a ENSGT00940000155329.b.a.b ENSGT00940000162839.b ENSGT00390000013749 ENSGT00940000156434 ENSGT01000000214434.B.b.e.a.o.b ENSGT00940000158012 ENSGT00940000157158.d ENSGT00940000154677.h ENSGT00390000004860.ab ENSGT00940000157225 ENSGT00940000157828 Hominidae ANCESTRAL SPECIES 12 ENSGT00390000012574 ENSGT00940000158241 ENSGT00390000003125.i.a ENSGT00390000010773 ENSGT00940000154672 ENSGT00390000009391.a ENSGT00390000012736 ENSGT00940000156418 ENSGT00940000156495 ENSGT00390000004697 ENSGT00940000160268 ENSGT00940000161766 ENSGT00940000161969 ENSGT00390000004179 ENSGT00940000159346 ENSGT01090000260040.b.b.b.b.a.a.a.b #22 ENSGT00950000182907.a.b.b.b.tb ENSGT00770000121728 ENSGT00950000183347 ENSGT00940000155329.b.a.a ENSGT00940000155329.b.a.b ENSGT00940000162839.b ENSGT00390000013749 ENSGT00940000156434 ENSGT01000000214434.B.b.e.a.o.b ENSGT00940000158012 ENSGT00940000157158.d ENSGT00940000154677.h ENSGT00390000004860.ab ENSGT00940000157225 ENSGT00940000157828 Homo/Pan/Gorilla group ANCESTRAL SPECIES 11 ENSGT00390000012574 ENSGT00940000158241 ENSGT00390000003125.i.a ENSGT00390000010773 ENSGT00940000154672 ENSGT00390000009391.a ENSGT00390000012736 ENSGT00940000156418 ENSGT00940000156495 ENSGT00390000004697 ENSGT00940000160268 ENSGT00940000161766 ENSGT00940000161969 ENSGT00390000004179 ENSGT00940000159346 ENSGT01090000260040.b.b.b.b.a.a.a.b #22 ENSGT00950000182907.a.b.b.b.tb.a ENSGT00770000121728 ENSGT00950000183347 ENSGT00940000155329.b.a.a ENSGT00940000155329.b.a.b ENSGT00940000162839.b ENSGT00390000013749 ENSGT00940000156434 ENSGT01000000214434.B.b.e.a.o.b.a ENSGT00940000158012 ENSGT00940000157158.d ENSGT00940000154677.h ENSGT00390000004860.ab ENSGT00940000157225 ENSGT00940000157828 Homo/Pan group ANCESTRAL SPECIES 10 ENSGT00390000012574 ENSGT00940000158241 ENSGT00390000003125.i.a ENSGT00390000010773 ENSGT00940000154672 ENSGT00390000009391.a ENSGT00390000012736 ENSGT00940000156418 ENSGT00940000156495 ENSGT00390000004697 ENSGT00940000160268 ENSGT00940000161766 ENSGT00940000161969 ENSGT00390000004179 ENSGT00940000159346 ENSGT01090000260040.b.b.b.b.a.a.a.b #22 ENSGT00950000182907.a.b.b.b.tb.a ENSGT00770000121728 ENSGT00950000183347 ENSGT00940000155329.b.a.a ENSGT00940000155329.b.a.b ENSGT00940000162839.b ENSGT00390000013749 ENSGT00940000156434 ENSGT01000000214434.B.b.e.a.o.b.a ENSGT00940000158012 ENSGT00940000157158.d ENSGT00940000154677.h ENSGT00390000004860.ab ENSGT00940000157225 ENSGT00940000157828 Pan ANCESTRAL SPECIES 7 ENSGT00390000012574 ENSGT00940000158241 ENSGT00390000003125.i.a ENSGT00390000010773 ENSGT00940000154672 ENSGT00390000009391.a ENSGT00390000012736 ENSGT00940000156418 ENSGT00940000156495 ENSGT00390000004697 ENSGT00940000160268 ENSGT00940000161766 ENSGT00940000161969 ENSGT00390000004179 ENSGT00940000159346 ENSGT01090000260040.b.b.b.b.a.a.a.b #22 ENSGT00950000182907.a.b.b.b.tb.a ENSGT00770000121728 ENSGT00950000183347 ENSGT00940000155329.b.a.a ENSGT00940000155329.b.a.b ENSGT00940000162839.b ENSGT00390000013749 ENSGT00940000156434 ENSGT01000000214434.B.b.e.a.o.b.a ENSGT00940000158012 ENSGT00940000157158.d ENSGT00940000154677.h ENSGT00390000004860.ab ENSGT00940000157225 ENSGT00940000157828 Bonobo MODERN SPECIES 17 GASK1B (ENSPPAG00000034391) TMEM144 (ENSPPAG00000030600) RXFP1 (ENSPPAG00000042348) C4orf46 (ENSPPAG00000026897) ETFDH (ENSPPAG00000033940) PPID (ENSPPAG00000029875) FNIP2 (ENSPPAG00000029816) C4orf45 (ENSPPAG00000029906) RAPGEF2 (ENSPPAG00000030225) FSTL5 (ENSPPAG00000033491) NAF1 (ENSPPAG00000034674) NPY1R (ENSPPAG00000044130) TKTL2 (ENSPPAG00000024062) TMA16 (ENSPPAG00000000177) MARCHF1 (ENSPPAG00000044145) ENSPPAG00000044141 #22 ENSPPAG00000028110 SMIM31 (ENSPPAG00000028428) APELA (ENSPPAG00000040006) ENSPPAG00000026877 TRIM60 (ENSPPAG00000009774) TRIM75 (ENSPPAG00000000495) TMEM192 (ENSPPAG00000030031) ENSPPAG00000020375 GK3 (ENSPPAG00000038634) MSMO1 (ENSPPAG00000037413) CPE (ENSPPAG00000030038) ENSPPAG00000005749 ENSPPAG00000038330 ENSPPAG00000032897 TLL1 (ENSPPAG00000038906) Chimpanzee MODERN SPECIES 17 ANXA10 (ENSPTRG00000016580) SPOCK3 (ENSPTRG00000016579) TLL1 (ENSPTRG00000016577) ENSPTRG00000044749 ENSPTRG00000048332 CPE (ENSPTRG00000016575) MSMO1 (ENSPTRG00000016574) GK3 (ENSPTRG00000042842) KLHL2 (ENSPTRG00000016572) TMEM192 (ENSPTRG00000047471) TRIM75 (ENSPTRG00000044938) TRIM60 (ENSPTRG00000016568) APELA (ENSPTRG00000044082) SMIM31 (ENSPTRG00000046070) ENSPTRG00000047384 ENSPTRG00000044373 #22 MARCHF1 (ENSPTRG00000016564) TMA16 (ENSPTRG00000023618) TKTL2 (ENSPTRG00000016563) NPY5R (ENSPTRG00000016562) NPY1R (ENSPTRG00000016561) NAF1 (ENSPTRG00000016560) FSTL5 (ENSPTRG00000016559) RAPGEF2 (ENSPTRG00000016558) C4H4orf45 (ENSPTRG00000016556) FNIP2 (ENSPTRG00000016555) PPID (ENSPTRG00000016554) ETFDH (ENSPTRG00000016553) C4H4orf46 (ENSPTRG00000031072) RXFP1 (ENSPTRG00000016551) TMEM144 (ENSPTRG00000016550) Cercopithecidae ANCESTRAL SPECIES 186 ENSGT01090000260040.b.b.b.b.a.a.a.b #22 ENSGT00950000182907.a.b.b.b.tb Cercopithecinae ANCESTRAL SPECIES 176 ENSGT01090000260040.b.b.b.b.a.a.a.b #22 ENSGT00950000182907.a.b.b.b.tb Cercopithecinae_a ANCESTRAL SPECIES 150 ENSGT01090000260040.b.b.b.b.a.a.a.b #22 ENSGT00950000182907.a.b.b.b.tb Macaca ANCESTRAL SPECIES 144 ENSGT01090000260040.b.b.b.b.a.a.a.b #22 ENSGT00950000182907.a.b.b.b.tb Pig-tailed macaque MODERN SPECIES 148 RXFP1 (ENSMNEG00000036056) ENSMNEG00000036942 ETFDH (ENSMNEG00000034153) ENSMNEG00000042456 FNIP2 (ENSMNEG00000040295) C4orf45 (ENSMNEG00000038719) RAPGEF2 (ENSMNEG00000004868) ENSMNEG00000035292 ENSMNEG00000016165 FSTL5 (ENSMNEG00000001053) NAF1 (ENSMNEG00000032677) NPY1R (ENSMNEG00000034371) TKTL2 (ENSMNEG00000020720) ENSMNEG00000044436 MARCHF1 (ENSMNEG00000041210) ENSMNEG00000035932 #22 ENSMNEG00000045385 Cercopithecinae_b ANCESTRAL SPECIES 194 ENSGT01090000260040.b.b.b.b.a.a.a.b #22 ENSGT00950000182907.a.b.b.b.tb Cercopithecinae_d ANCESTRAL SPECIES 323 ENSGT01090000260040.b.b.b.b.a.a.a.b #22 ENSGT00950000182907.a.b.b.b.tb Drill MODERN SPECIES 882 FSTL5 (ENSMLEG00000033477) NAF1 (ENSMLEG00000035330) NPY1R (ENSMLEG00000028204) NPY5R (ENSMLEG00000020301) TKTL2 (ENSMLEG00000022478) TMA16 (ENSMLEG00000041414) MARCHF1 (ENSMLEG00000030720) ENSMLEG00000033048 #22 ENSMLEG00000038007 Catarrhini ANCESTRAL SPECIES 17 ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00390000003682.ib.b.c.a.a ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.w.a #16 ENSGT00390000016845 #17 ENSGT00860000136202 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a.b #22 ENSGT00940000155443 #23 ENSGT00910000147368 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 Cercopithecidae ANCESTRAL SPECIES 18 ENSGT00940000154459.B #36 ENSGT00390000003682.ib.b.c.a.a ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00910000147526 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.bb.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.w.a #16 ENSGT00390000016845 #17 ENSGT00860000136202 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a.b #22 ENSGT00940000155443 #23 ENSGT00910000147368 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00910000146975 ENSGT00940000161652 #8 Rhinopithecus ANCESTRAL SPECIES 174 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00390000003682.ib.b.c.a.a ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00910000147526 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.bb.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.w.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a.b #22 ENSGT00940000155443 #23 ENSGT00910000147368 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.a #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 1640 RAP2B (ENSRROG00000037732) P2RY1 (ENSRROG00000038082) ENSRROG00000036768 #22 MBNL1 (ENSRROG00000000867) SUCNR1 (ENSRROG00000032573) AADAC (ENSRROG00000041640) AADACL2 (ENSRROG00000033064) Golden snub-nosed monkey MODERN SPECIES 2175 ROCK2 (ENSRROG00000034982) SLC66A3 (ENSRROG00000037932) #37 C2orf50 (ENSRROG00000036464) #36 ENSRROG00000039195 KCNF1 (ENSRROG00000034842) #35 PDIA6 (ENSRROG00000040359) #34 ATP6V1C2 (ENSRROG00000039206) #33 ENSRROG00000029320 NOL10 (ENSRROG00000043208) #32 ENSRROG00000045795 #30 HPCAL1 (ENSRROG00000033182) #28 RRM2 (ENSRROG00000041328) #16 KLF11 (ENSRROG00000041608) #18 GRHL1 (ENSRROG00000028348) #19 TAF1B (ENSRROG00000024712) #21 YWHAQ (ENSRROG00000044691) #22 ENSRROG00000025134 ADAM17 (ENSRROG00000038460) #23 ENSRROG00000036140 IAH1 (ENSRROG00000034099) #24 CPSF3 (ENSRROG00000033792) #25 ENSRROG00000044107 #26 ASAP2 (ENSRROG00000042260) #27 ENSRROG00000035274 ENSRROG00000033889 MBOAT2 (ENSRROG00000045314) #15 KIDINS220 (ENSRROG00000036660) #14 ID2 (ENSRROG00000004887) #12 Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 1416 P2RY1 (ENSRBIG00000025972) ENSRBIG00000027605 ENSRBIG00000038423 #22 ENSRBIG00000011887 MBNL1 (ENSRBIG00000030443) SUCNR1 (ENSRBIG00000034337) Black snub-nosed monkey MODERN SPECIES 147 E2F6 (ENSRBIG00000039075) ROCK2 (ENSRBIG00000044675) SLC66A3 (ENSRBIG00000030849) #37 C2orf50 (ENSRBIG00000034453) #36 KCNF1 (ENSRBIG00000044334) #35 PDIA6 (ENSRBIG00000031454) #34 ENSRBIG00000035043 ATP6V1C2 (ENSRBIG00000031961) #33 NOL10 (ENSRBIG00000043507) #32 ENSRBIG00000000544 #30 HPCAL1 (ENSRBIG00000034017) #28 RRM2 (ENSRBIG00000033258) #16 KLF11 (ENSRBIG00000037952) #18 GRHL1 (ENSRBIG00000024539) #19 TAF1B (ENSRBIG00000028101) #21 YWHAQ (ENSRBIG00000023381) #22 ENSRBIG00000023329 ADAM17 (ENSRBIG00000031143) #23 IAH1 (ENSRBIG00000029112) #24 CPSF3 (ENSRBIG00000041615) #25 ENSRBIG00000039204 #26 ENSRBIG00000034346 ASAP2 (ENSRBIG00000035134) #27 MBOAT2 (ENSRBIG00000035711) #15 KIDINS220 (ENSRBIG00000035069) #14 ID2 (ENSRBIG00000044689) #12 Cercopithecinae ANCESTRAL SPECIES 17 ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00910000147526 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.bb.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.w.a #16 ENSGT00390000016845 #17 ENSGT00860000136202 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a.b #22 ENSGT00940000155443 #23 ENSGT00910000147368 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00910000146975 ENSGT00940000161652 #8 Cercopithecinae_a ANCESTRAL SPECIES 17 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00910000147526 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.bb.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.x #16 ENSGT00940000163505.b.b.b.b.b ENSGT00390000013305.a.a.w.a #16 ENSGT00390000016845 #17 ENSGT00860000136202 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a.b #22 ENSGT00940000155443 #23 ENSGT00910000147368 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00910000146975 ENSGT00940000161652 #8 Cercopithecinae_b ANCESTRAL SPECIES 15 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00910000147526 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.bb.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.x #16 ENSGT00940000163505.b.b.b.b.b ENSGT00390000013305.a.a.w.a #16 ENSGT00390000016845 #17 ENSGT00860000136202 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00910000146975 ENSGT00940000161652 #8 ENSGT00940000162396 Olive baboon MODERN SPECIES 5 ROCK2 (ENSPANG00000016385) SLC66A3 (ENSPANG00000024078) #37 C2orf50 (ENSPANG00000005249) #36 KCNF1 (ENSPANG00000015920) #35 PDIA6 (ENSPANG00000006258) #34 ATP6V1C2 (ENSPANG00000017189) #33 NOL10 (ENSPANG00000006259) #32 ENSPANG00000011223 #30 HPCAL1 (ENSPANG00000042769) #28 ENSPANG00000044848 RRM2 (ENSPANG00000018767) #16 CYS1 (ENSPANG00000005251) #17 ENSPANG00000031829 GRHL1 (ENSPANG00000020814) #19 TAF1B (ENSPANG00000013803) #21 YWHAQ (ENSPANG00000037411) #22 ADAM17 (ENSPANG00000000727) #23 IAH1 (ENSPANG00000009398) #24 CPSF3 (ENSPANG00000016798) #25 ITGB1BP1 (ENSPANG00000016797) #26 ASAP2 (ENSPANG00000023973) #27 MBOAT2 (ENSPANG00000022343) #15 KIDINS220 (ENSPANG00000021602) #14 ID2 (ENSPANG00000039736) #12 RNF144A (ENSPANG00000023570) #11 RSAD2 (ENSPANG00000026240) #10 CMPK2 (ENSPANG00000026237) #9 ENSPANG00000051199 SOX11 (ENSPANG00000041661) #8 DCDC2C (ENSPANG00000007153) ALLC (ENSPANG00000017775) Cercopithecinae_d ANCESTRAL SPECIES 23 ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00910000147526 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.bb.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.x #16 ENSGT00390000016845 #17 ENSGT00860000136202 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00910000146975 ENSGT00940000161652 #8 ENSGT00940000162396 Drill DUPLICATION Drill MODERN SPECIES 1438 ARMCX1 (ENSMLEG00000019309) ARMCX4 (ENSMLEG00000037823) GLA (ENSMLEG00000038421) ENSMLEG00000041433 BTK (ENSMLEG00000041562) ENSMLEG00000034977 TAF7L (ENSMLEG00000036706) DRP2 (ENSMLEG00000035379) ENSMLEG00000016312 ENSMLEG00000036465 #22 CENPI (ENSMLEG00000034737) TMEM35A (ENSMLEG00000041720) TRMT2B (ENSMLEG00000041170) ARL13A (ENSMLEG00000044347) XKRX (ENSMLEG00000033129) ENSMLEG00000033439 NOX1 (ENSMLEG00000037294) CSTF2 (ENSMLEG00000036870) ENSMLEG00000034411 ENSMLEG00000002642 SYTL4 (ENSMLEG00000039405) SRPX2 (ENSMLEG00000039631) TSPAN6 (ENSMLEG00000028878) TNMD (ENSMLEG00000043007) Drill MODERN SPECIES 1452 E2F6 (ENSMLEG00000031126) ROCK2 (ENSMLEG00000029001) SLC66A3 (ENSMLEG00000003286) #37 C2orf50 (ENSMLEG00000038536) #36 PDIA6 (ENSMLEG00000033930) #34 ATP6V1C2 (ENSMLEG00000028199) #33 ENSMLEG00000033772 NOL10 (ENSMLEG00000011854) #32 ODC1 (ENSMLEG00000039068) #30 HPCAL1 (ENSMLEG00000039247) #28 ENSMLEG00000035635 #16 ENSMLEG00000042927 KLF11 (ENSMLEG00000036570) #18 GRHL1 (ENSMLEG00000036453) #19 TAF1B (ENSMLEG00000043999) #21 YWHAQ (ENSMLEG00000030005) #22 ADAM17 (ENSMLEG00000042175) #23 IAH1 (ENSMLEG00000044290) #24 CPSF3 (ENSMLEG00000026825) #25 ITGB1BP1 (ENSMLEG00000031967) #26 ASAP2 (ENSMLEG00000033183) #27 ENSMLEG00000040215 MBOAT2 (ENSMLEG00000037301) #15 KIDINS220 (ENSMLEG00000035601) #14 ID2 (ENSMLEG00000040695) #12 Sooty mangabey DUPLICATION Sooty mangabey MODERN SPECIES 181 ENSCATG00000029903 ENSCATG00000021788 ZMAT1 (ENSCATG00000000551) ARMCX3 (ENSCATG00000036750) ARMCX6 (ENSCATG00000015784) ARMCX1 (ENSCATG00000022441) ARMCX4 (ENSCATG00000043156) GLA (ENSCATG00000037297) ENSCATG00000010793 BTK (ENSCATG00000033966) TIMM8A (ENSCATG00000020206) TAF7L (ENSCATG00000037171) DRP2 (ENSCATG00000022212) ENSCATG00000035715 ENSCATG00000030561 #22 CENPI (ENSCATG00000017865) TMEM35A (ENSCATG00000039413) TRMT2B (ENSCATG00000001665) ARL13A (ENSCATG00000002456) XKRX (ENSCATG00000035962) ENSCATG00000038584 NOX1 (ENSCATG00000031320) CSTF2 (ENSCATG00000022835) ENSCATG00000033662 ENSCATG00000042265 ENSCATG00000022377 SYTL4 (ENSCATG00000037801) SRPX2 (ENSCATG00000000283) TSPAN6 (ENSCATG00000035573) TNMD (ENSCATG00000030175) Sooty mangabey MODERN SPECIES 121 ENSCATG00000031151 #16 CYS1 (ENSCATG00000014723) #17 ENSCATG00000033874 KLF11 (ENSCATG00000037396) #18 GRHL1 (ENSCATG00000027324) #19 TAF1B (ENSCATG00000039789) #21 ENSCATG00000023335 #22 ADAM17 (ENSCATG00000037482) #23 IAH1 (ENSCATG00000029613) #24 CPSF3 (ENSCATG00000014770) #25 ITGB1BP1 (ENSCATG00000036040) #26 ASAP2 (ENSCATG00000035990) #27 ENSCATG00000011380 MBOAT2 (ENSCATG00000040596) #15 KIDINS220 (ENSCATG00000041275) #14 ID2 (ENSCATG00000030248) #12 RNF144A (ENSCATG00000033975) #11 RSAD2 (ENSCATG00000030147) #10 CMPK2 (ENSCATG00000040689) #9 ENSCATG00000018474 SOX11 (ENSCATG00000020144) #8 DCDC2C (ENSCATG00000025057) Macaca ANCESTRAL SPECIES 17 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00910000147526 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.bb.a #30 ENSGT00940000154645.A #28 ENSGT00940000163505.b.b.b.b.b ENSGT00390000013305.a.a.w.a #16 ENSGT00390000016845 #17 ENSGT00860000136202 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a.b #22 ENSGT00940000155443 #23 ENSGT00910000147368 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00910000146975 ENSGT00940000161652 #8 Macaca_a ANCESTRAL SPECIES 15 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.bb.a #30 ENSGT00940000154645.A #28 ENSGT00940000163505.b.b.b.b.b ENSGT00390000013305.a.a.w.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a.b #22 ENSGT01090000260040.b.b.b.b.b ##22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00910000148182 ENSGT00940000154030.a.b #9 ENSGT01100000263493.a.b.b.a.b.a.a.a.b.a.a ENSGT00940000170471.A.b.b.a.b.b Rhesus DUPLICATION Rhesus MODERN SPECIES 15 ENSMMUG00000053509 ENSMMUG00000040183 FAM241A (ENSMMUG00000050382) AP1AR (ENSMMUG00000065026) TIFA (ENSMMUG00000015589) ALPK1 (ENSMMUG00000014073) NEUROG2 (ENSMMUG00000014078) ZGRF1 (ENSMMUG00000023591) LARP7 (ENSMMUG00000017911) ANK2 (ENSMMUG00000008633) ENSMMUG00000062879 CAMK2D (ENSMMUG00000008587) ARSJ (ENSMMUG00000023597) UGT8 (ENSMMUG00000014456) NDST4 (ENSMMUG00000002883) ENSMMUG00000006015 #22 TRAM1L1 (ENSMMUG00000011778) NDST3 (ENSMMUG00000015259) PRSS12 (ENSMMUG00000015260) METTL14 (ENSMMUG00000007292) SEC24D (ENSMMUG00000007294) SYNPO2 (ENSMMUG00000008702) MYOZ2 (ENSMMUG00000008703) ENSMMUG00000054494 USP53 (ENSMMUG00000008705) FABP2 (ENSMMUG00000061216) PDE5A (ENSMMUG00000007305) MAD2L1 (ENSMMUG00000054168) ENSMMUG00000062519 PRDM5 (ENSMMUG00000003249) NDNF (ENSMMUG00000013989) Rhesus MODERN SPECIES 4 ROCK2 (ENSMMUG00000016678) SLC66A3 (ENSMMUG00000022785) #37 C13H2orf50 (ENSMMUG00000064867) #36 ENSMMUG00000059454 PDIA6 (ENSMMUG00000012864) #34 ATP6V1C2 (ENSMMUG00000010320) #33 NOL10 (ENSMMUG00000010671) #32 ODC1 (ENSMMUG00000020441) #30 HPCAL1 (ENSMMUG00000020440) #28 ENSMMUG00000053871 RRM2 (ENSMMUG00000002057) #16 CYS1 (ENSMMUG00000030941) #17 KLF11 (ENSMMUG00000002054) #18 GRHL1 (ENSMMUG00000001535) #19 TAF1B (ENSMMUG00000001530) #21 YWHAQ (ENSMMUG00000006965) #22 ENSMMUG00000062403 ADAM17 (ENSMMUG00000012921) #23 IAH1 (ENSMMUG00000018045) #24 CPSF3 (ENSMMUG00000018038) #25 ITGB1BP1 (ENSMMUG00000018036) ASAP2 (ENSMMUG00000018033) #27 MBOAT2 (ENSMMUG00000021037) #15 KIDINS220 (ENSMMUG00000021036) #14 ID2 (ENSMMUG00000003237) #12 RNF144A (ENSMMUG00000045908) #11 RSAD2 (ENSMMUG00000015969) #10 ENSMMUG00000050777 CMPK2 (ENSMMUG00000015968) #9 ENSMMUG00000058497 SOX11 (ENSMMUG00000038367) #8 Pig-tailed macaque DUPLICATION Pig-tailed macaque MODERN SPECIES 282 ENSMNEG00000040899 ZMAT1 (ENSMNEG00000036310) ARMCX1 (ENSMNEG00000038239) ARMCX4 (ENSMNEG00000028996) GLA (ENSMNEG00000039278) RPL36A (ENSMNEG00000041457) BTK (ENSMNEG00000037093) TIMM8A (ENSMNEG00000036806) TAF7L (ENSMNEG00000028576) DRP2 (ENSMNEG00000039243) ENSMNEG00000035989 ENSMNEG00000034104 #22 CENPI (ENSMNEG00000005531) TMEM35A (ENSMNEG00000034536) TRMT2B (ENSMNEG00000045257) ARL13A (ENSMNEG00000026016) XKRX (ENSMNEG00000041665) ENSMNEG00000038356 NOX1 (ENSMNEG00000002185) CSTF2 (ENSMNEG00000041824) SYTL4 (ENSMNEG00000038314) SRPX2 (ENSMNEG00000008534) TSPAN6 (ENSMNEG00000044238) TNMD (ENSMNEG00000030016) PCDH19 (ENSMNEG00000037156) ENSMNEG00000037685 Pig-tailed macaque MODERN SPECIES 127 SLC66A3 (ENSMNEG00000044841) #37 C2orf50 (ENSMNEG00000037338) #36 KCNF1 (ENSMNEG00000039841) #35 PDIA6 (ENSMNEG00000030894) #34 ATP6V1C2 (ENSMNEG00000037515) #33 ENSMNEG00000038801 NOL10 (ENSMNEG00000039685) #32 ODC1 (ENSMNEG00000043400) #30 HPCAL1 (ENSMNEG00000033423) #28 RRM2 (ENSMNEG00000028272) #16 CYS1 (ENSMNEG00000030186) #17 ENSMNEG00000018854 KLF11 (ENSMNEG00000034723) #18 GRHL1 (ENSMNEG00000030598) #19 TAF1B (ENSMNEG00000007382) #21 YWHAQ (ENSMNEG00000035884) #22 ADAM17 (ENSMNEG00000031025) #23 ENSMNEG00000039629 IAH1 (ENSMNEG00000038428) #24 CPSF3 (ENSMNEG00000039447) #25 ITGB1BP1 (ENSMNEG00000043390) #26 ASAP2 (ENSMNEG00000020414) #27 ENSMNEG00000042727 MBOAT2 (ENSMNEG00000036853) #15 KIDINS220 (ENSMNEG00000044570) #14 ID2 (ENSMNEG00000039277) #12 RNF144A (ENSMNEG00000030505) #11 RSAD2 (ENSMNEG00000040478) #10 CMPK2 (ENSMNEG00000018646) #9 ENSMNEG00000032217 SOX11 (ENSMNEG00000008816) #8 Hominoidea ANCESTRAL SPECIES 18 ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00390000003682.ib.b.c.a.a.b ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.w.a #16 ENSGT00390000016845 #17 ENSGT00860000136202 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a.b #22 ENSGT00940000155443 #23 ENSGT00910000147368 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 Hominidae ANCESTRAL SPECIES 19 ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00390000003682.ib.b.c.a.a.b ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.w.a #16 ENSGT00390000016845 #17 ENSGT00860000136202 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a.b #22 ENSGT00940000155443 #23 ENSGT00910000147368 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 Orangutan MODERN SPECIES 14 E2F6 (ENSPPYG00000036394) ROCK2 (ENSPPYG00000012647) SLC66A3 (ENSPPYG00000012648) #37 C2orf50 (ENSPPYG00000012710) #36 KCNF1 (ENSPPYG00000041457) #35 PDIA6 (ENSPPYG00000012651) #34 ATP6V1C2 (ENSPPYG00000012652) #33 NOL10 (ENSPPYG00000012653) #32 ODC1 (ENSPPYG00000012654) #30 HPCAL1 (ENSPPYG00000012655) #28 RRM2 (ENSPPYG00000012656) #16 CYS1 (ENSPPYG00000012657) #17 KLF11 (ENSPPYG00000012659) #18 GRHL1 (ENSPPYG00000012661) #19 TAF1B (ENSPPYG00000012662) #21 YWHAQ (ENSPPYG00000012663) #22 ADAM17 (ENSPPYG00000012664) #23 IAH1 (ENSPPYG00000012665) #24 CPSF3 (ENSPPYG00000012666) #25 ITGB1BP1 (ENSPPYG00000031588) #26 ASAP2 (ENSPPYG00000012668) #27 ENSPPYG00000037864 MBOAT2 (ENSPPYG00000012669) #15 KIDINS220 (ENSPPYG00000012670) #14 ID2 (ENSPPYG00000012719) #12 ENSPPYG00000030180 RNF144A (ENSPPYG00000012673) #11 RSAD2 (ENSPPYG00000012674) #10 CMPK2 (ENSPPYG00000012675) #9 SOX11 (ENSPPYG00000036338) #8 ENSPPYG00000012680 Homo/Pan/Gorilla group ANCESTRAL SPECIES 18 ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00390000003682.ib.b.c.a.a.b ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.w.a #16 ENSGT00390000016845 #17 ENSGT00860000136202 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a.b #22 ENSGT00940000155443 #23 ENSGT00910000147368 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464.o #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 Gorilla MODERN SPECIES 14 ENSGGOG00000004964 SLC66A3 (ENSGGOG00000001548) #37 C2orf50 (ENSGGOG00000043829) #36 ENSGGOG00000039303 KCNF1 (ENSGGOG00000009528) #35 PDIA6 (ENSGGOG00000002278) #34 ATP6V1C2 (ENSGGOG00000002273) #33 NOL10 (ENSGGOG00000034826) #32 ODC1 (ENSGGOG00000007991) #30 HPCAL1 (ENSGGOG00000007141) #28 RRM2 (ENSGGOG00000040108) #16 ENSGGOG00000027524 KLF11 (ENSGGOG00000012494) #18 GRHL1 (ENSGGOG00000002692) #19 TAF1B (ENSGGOG00000002685) #21 ENSGGOG00000001569 #22 ADAM17 (ENSGGOG00000013128) #23 ENSGGOG00000039328 IAH1 (ENSGGOG00000001760) #24 CPSF3 (ENSGGOG00000001757) #25 ITGB1BP1 (ENSGGOG00000001754) #26 ASAP2 (ENSGGOG00000001744) #27 MBOAT2 (ENSGGOG00000040459) #15 KIDINS220 (ENSGGOG00000009822) #14 ENSGGOG00000042851 ENSGGOG00000042490 RNF144A (ENSGGOG00000039753) #11 RSAD2 (ENSGGOG00000010720) #10 ENSGGOG00000036393 ENSGGOG00000004066 SOX11 (ENSGGOG00000037622) #8 Homo/Pan group ANCESTRAL SPECIES 14 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.w.a #16 ENSGT00390000016845 #17 ENSGT00860000136202 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464.o #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Pan ANCESTRAL SPECIES 17 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.w.a #16 ENSGT00390000016845 #17 ENSGT00860000136202 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464.o #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Chimpanzee MODERN SPECIES 14 ROCK2 (ENSPTRG00000011658) SLC66A3 (ENSPTRG00000011657) #37 C2AH2orf50 (ENSPTRG00000011656) #36 KCNF1 (ENSPTRG00000030563) #35 PDIA6 (ENSPTRG00000011653) #34 ATP6V1C2 (ENSPTRG00000011652) #33 NOL10 (ENSPTRG00000011651) #32 ODC1 (ENSPTRG00000011650) #30 HPCAL1 (ENSPTRG00000011649) #28 RRM2 (ENSPTRG00000042985) #16 CYS1 (ENSPTRG00000030565) #17 ENSPTRG00000046195 KLF11 (ENSPTRG00000011645) #18 GRHL1 (ENSPTRG00000011643) #19 TAF1B (ENSPTRG00000011642) #21 YWHAQ (ENSPTRG00000011641) #22 ADAM17 (ENSPTRG00000011640) #23 IAH1 (ENSPTRG00000011639) #24 CPSF3 (ENSPTRG00000011638) #25 ITGB1BP1 (ENSPTRG00000011637) #26 ENSPTRG00000043418 ASAP2 (ENSPTRG00000011636) #27 MBOAT2 (ENSPTRG00000011634) #15 KIDINS220 (ENSPTRG00000011633) #14 ID2 (ENSPTRG00000011632) #12 RNF144A (ENSPTRG00000011630) #11 RSAD2 (ENSPTRG00000011629) #10 CMPK2 (ENSPTRG00000011627) #9 SOX11 (ENSPTRG00000045174) #8 DCDC2C (ENSPTRG00000033961) ALLC (ENSPTRG00000011618) Human MODERN SPECIES 11 E2F6 (ENSG00000169016) ROCK2 (ENSG00000134318) SLC66A3 (ENSG00000162976) #37 C2orf50 (ENSG00000150873) #36 KCNF1 (ENSG00000162975) #35 PDIA6 (ENSG00000143870) #34 ATP6V1C2 (ENSG00000143882) #33 NOL10 (ENSG00000115761) #32 ODC1 (ENSG00000115758) #30 HPCAL1 (ENSG00000115756) #28 RRM2 (ENSG00000171848) #16 CYS1 (ENSG00000205795) #17 KLF11 (ENSG00000172059) #18 GRHL1 (ENSG00000134317) #19 TAF1B (ENSG00000115750) #21 YWHAQ (ENSG00000134308) #22 ADAM17 (ENSG00000151694) #23 IAH1 (ENSG00000134330) #24 CPSF3 (ENSG00000119203) #25 ITGB1BP1 (ENSG00000119185) #26 ASAP2 (ENSG00000151693) #27 MBOAT2 (ENSG00000143797) #15 KIDINS220 (ENSG00000134313) #14 ID2 (ENSG00000115738) #12 RNF144A (ENSG00000151692) #11 RSAD2 (ENSG00000134321) #10 CMPK2 (ENSG00000134326) #9 SOX11 (ENSG00000176887) #8 DCDC2C (ENSG00000214866) ALLC (ENSG00000151360) COLEC11 (ENSG00000118004) Gibbon DUPLICATION Gibbon MODERN SPECIES 21 IL7R (ENSNLEG00000015949) ENSNLEG00000015937 PRLR (ENSNLEG00000032379) ENSNLEG00000014471 DNAJC21 (ENSNLEG00000014463) BRIX1 (ENSNLEG00000032149) RAD1 (ENSNLEG00000014437) TTC23L (ENSNLEG00000014433) RAI14 (ENSNLEG00000014363) C1QTNF3 (ENSNLEG00000014340) AMACR (ENSNLEG00000014313) SLC45A2 (ENSNLEG00000014299) ADAMTS12 (ENSNLEG00000014257) TARS1 (ENSNLEG00000014187) NPR3 (ENSNLEG00000014164) ENSNLEG00000019201 #22 SUB1 (ENSNLEG00000036068) ENSNLEG00000031879 ZFR (ENSNLEG00000014098) MTMR12 (ENSNLEG00000014059) ENSNLEG00000033362 GOLPH3 (ENSNLEG00000028554) PDZD2 (ENSNLEG00000014024) C5orf22 (ENSNLEG00000014007) DROSHA (ENSNLEG00000013963) CDH6 (ENSNLEG00000013944) ENSNLEG00000029200 ENSNLEG00000033215 CDH9 (ENSNLEG00000012011) CDH10 (ENSNLEG00000012000) ENSNLEG00000031321 Gibbon MODERN SPECIES 9 ROCK2 (ENSNLEG00000014043) SLC66A3 (ENSNLEG00000014031) #37 C2orf50 (ENSNLEG00000014028) #36 KCNF1 (ENSNLEG00000019349) #35 PDIA6 (ENSNLEG00000013916) #34 ATP6V1C2 (ENSNLEG00000013902) #33 NOL10 (ENSNLEG00000013851) #32 ODC1 (ENSNLEG00000013820) #30 HPCAL1 (ENSNLEG00000013802) #28 RRM2 (ENSNLEG00000035605) #16 ENSNLEG00000031728 #17 ENSNLEG00000031300 KLF11 (ENSNLEG00000013701) #18 GRHL1 (ENSNLEG00000013634) #19 TAF1B (ENSNLEG00000013577) #21 YWHAQ (ENSNLEG00000013534) #22 ENSNLEG00000034153 ADAM17 (ENSNLEG00000013455) #23 IAH1 (ENSNLEG00000013435) #24 CPSF3 (ENSNLEG00000013359) #25 ITGB1BP1 (ENSNLEG00000013322) #26 ENSNLEG00000032390 ASAP2 (ENSNLEG00000013248) #27 MBOAT2 (ENSNLEG00000013229) #15 KIDINS220 (ENSNLEG00000013206) #14 ID2 (ENSNLEG00000013192) #12 ENSNLEG00000035496 RNF144A (ENSNLEG00000015431) #11 RSAD2 (ENSNLEG00000015429) #10 ENSNLEG00000031381 #9 DCDC2C (ENSNLEG00000015424) Platyrrhini ANCESTRAL SPECIES 45 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B.e #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.y.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT01090000260040.b.b.b.b.a.b.b ##22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.c #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 Cebidae ANCESTRAL SPECIES 40 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B.f #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.y.a.b #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT01090000260040.b.b.b.b.a.b.b ##22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.c #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 Cebidae_a ANCESTRAL SPECIES 46 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B.f #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.y.a.b #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT01090000260040.b.b.b.b.a.b.b ##22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.c #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 Capuchin DUPLICATION Capuchin MODERN SPECIES 42 PARP1 (ENSCCAG00000033484) LIN9 (ENSCCAG00000024893) MIXL1 (ENSCCAG00000030603) ACBD3 (ENSCCAG00000029038) ENSCCAG00000021678 SDE2 (ENSCCAG00000033106) ENSCCAG00000024966 PYCR2 (ENSCCAG00000029202) ENSCCAG00000030395 TMEM63A (ENSCCAG00000022581) EPHX1 (ENSCCAG00000024699) SRP9 (ENSCCAG00000034464) ENSCCAG00000025068 ENAH (ENSCCAG00000026712) LBR (ENSCCAG00000018433) ENSCCAG00000017821 #22 DNAH14 (ENSCCAG00000023187) ENSCCAG00000023109 CNIH3 (ENSCCAG00000018443) WDR26 (ENSCCAG00000035904) CNIH4 (ENSCCAG00000037449) NVL (ENSCCAG00000037416) DEGS1 (ENSCCAG00000037018) FBXO28 (ENSCCAG00000019791) TP53BP2 (ENSCCAG00000029817) CAPN2 (ENSCCAG00000021862) CAPN8 (ENSCCAG00000030926) SUSD4 (ENSCCAG00000002755) TLR5 (ENSCCAG00000034906) DISP1 (ENSCCAG00000035391) FAM177B (ENSCCAG00000031878) Capuchin MODERN SPECIES 1 E2F6 (ENSCCAG00000023406) ROCK2 (ENSCCAG00000024293) SLC66A3 (ENSCCAG00000023484) #37 C2orf50 (ENSCCAG00000027477) #36 KCNF1 (ENSCCAG00000022210) #35 PDIA6 (ENSCCAG00000028275) #34 ATP6V1C2 (ENSCCAG00000034767) #33 NOL10 (ENSCCAG00000027373) #32 ODC1 (ENSCCAG00000021928) #30 HPCAL1 (ENSCCAG00000020323) #28 ENSCCAG00000009364 #16 CYS1 (ENSCCAG00000028829) #17 KLF11 (ENSCCAG00000026312) #18 GRHL1 (ENSCCAG00000022259) #19 TAF1B (ENSCCAG00000031135) #21 YWHAQ (ENSCCAG00000031746) #22 ENSCCAG00000001935 ADAM17 (ENSCCAG00000035481) #23 IAH1 (ENSCCAG00000034153) #24 ENSCCAG00000010701 CPSF3 (ENSCCAG00000036730) #25 ITGB1BP1 (ENSCCAG00000036127) #26 ASAP2 (ENSCCAG00000033861) #27 MBOAT2 (ENSCCAG00000028053) #15 KIDINS220 (ENSCCAG00000035619) #14 ID2 (ENSCCAG00000034943) #12 Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 79 LIN9 (ENSSBOG00000034500) MIXL1 (ENSSBOG00000030522) ACBD3 (ENSSBOG00000033136) ENSSBOG00000034792 SDE2 (ENSSBOG00000023524) ENSSBOG00000024940 PYCR2 (ENSSBOG00000030067) ENSSBOG00000025223 TMEM63A (ENSSBOG00000034751) EPHX1 (ENSSBOG00000019277) SRP9 (ENSSBOG00000034573) ENAH (ENSSBOG00000032372) LBR (ENSSBOG00000032928) DNAH14 (ENSSBOG00000027125) ENSSBOG00000028635 ENSSBOG00000030414 #22 ENSSBOG00000026740 CNIH3 (ENSSBOG00000028177) WDR26 (ENSSBOG00000031377) CNIH4 (ENSSBOG00000031048) NVL (ENSSBOG00000034666) ENSSBOG00000019803 DEGS1 (ENSSBOG00000031189) ENSSBOG00000036116 TP53BP2 (ENSSBOG00000023321) CAPN2 (ENSSBOG00000035305) CAPN8 (ENSSBOG00000020907) SUSD4 (ENSSBOG00000033888) DISP1 (ENSSBOG00000031918) FAM177B (ENSSBOG00000024230) BROX (ENSSBOG00000025185) Bolivian squirrel monkey MODERN SPECIES 59 GFRAL (ENSSBOG00000035990) HMGCLL1 (ENSSBOG00000035484) BMP5 (ENSSBOG00000026475) COL21A1 (ENSSBOG00000026503) DST (ENSSBOG00000027054) ENSSBOG00000022537 ENSSBOG00000023362 ENSSBOG00000034355 BAG2 (ENSSBOG00000033323) RAB23 (ENSSBOG00000033237) PRIM2 (ENSSBOG00000033256) KHDRBS2 (ENSSBOG00000019779) ENSSBOG00000021435 LGSN (ENSSBOG00000031920) ENSSBOG00000020230 ENSSBOG00000028663 #22 PHF3 (ENSSBOG00000032463) ENSSBOG00000031359 ENSSBOG00000028568 ENSSBOG00000004169 ADGRB3 (ENSSBOG00000024707) ENSSBOG00000019508 LMBRD1 (ENSSBOG00000030173) COL19A1 (ENSSBOG00000022687) COL9A1 (ENSSBOG00000029347) FAM135A (ENSSBOG00000035417) SDHAF4 (ENSSBOG00000033365) SMAP1 (ENSSBOG00000035623) B3GAT2 (ENSSBOG00000035945) ENSSBOG00000019180 OGFRL1 (ENSSBOG00000035704) Strepsirrhini ANCESTRAL SPECIES 13 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000173435 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Bushbaby MODERN SPECIES 137 SLC66A3 (ENSOGAG00000009765) #37 C2orf50 (ENSOGAG00000009762) #36 KCNF1 (ENSOGAG00000026918) #35 ENSOGAG00000033741 PDIA6 (ENSOGAG00000009751) #34 ATP6V1C2 (ENSOGAG00000009748) #33 NOL10 (ENSOGAG00000010494) #32 ENSOGAG00000033625 ENSOGAG00000001558 #30 HPCAL1 (ENSOGAG00000001557) #28 RRM2 (ENSOGAG00000007075) #16 ENSOGAG00000028490 KLF11 (ENSOGAG00000026035) #18 GRHL1 (ENSOGAG00000014342) #19 TAF1B (ENSOGAG00000014337) #21 YWHAQ (ENSOGAG00000000547) #22 ADAM17 (ENSOGAG00000000546) #23 IAH1 (ENSOGAG00000000544) #24 CPSF3 (ENSOGAG00000001680) #25 ITGB1BP1 (ENSOGAG00000001679) #26 ASAP2 (ENSOGAG00000001677) #27 ENSOGAG00000034773 ENSOGAG00000034565 MBOAT2 (ENSOGAG00000034475) #15 KIDINS220 (ENSOGAG00000012566) #14 ID2 (ENSOGAG00000012565) #12 Lemuriformes ANCESTRAL SPECIES 23 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.e.a #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000173435 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Mouse lemur MODERN SPECIES 30 ENSMICG00000028029 ROCK2 (ENSMICG00000037673) KCNF1 (ENSMICG00000017370) #35 ENSMICG00000017368 #34 ATP6V1C2 (ENSMICG00000017366) #33 NOL10 (ENSMICG00000004805) #32 ENSMICG00000012511 #30 HPCAL1 (ENSMICG00000029256) #28 ENSMICG00000012789 #16 CYS1 (ENSMICG00000027772) #17 KLF11 (ENSMICG00000012761) #18 GRHL1 (ENSMICG00000012737) #19 TAF1B (ENSMICG00000012714) #21 SLC66A3 (ENSMICG00000043387) #37 ENSMICG00000045104 #36 YWHAQ (ENSMICG00000000973) #22 ADAM17 (ENSMICG00000002380) #23 IAH1 (ENSMICG00000002377) #24 CPSF3 (ENSMICG00000002363) #25 ITGB1BP1 (ENSMICG00000002359) #26 ASAP2 (ENSMICG00000002345) #27 MBOAT2 (ENSMICG00000010098) #15 KIDINS220 (ENSMICG00000010065) #14 ID2 (ENSMICG00000033026) #12 RNF144A (ENSMICG00000006187) #11 RSAD2 (ENSMICG00000000161) #10 CMPK2 (ENSMICG00000035731) #9 ENSMICG00000038260 SOX11 (ENSMICG00000026777) #8 ENSMICG00000041516 ENSMICG00000032327 Lemuriformes_a ANCESTRAL SPECIES 10 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.e.a #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000173435 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Greater bamboo lemur MODERN SPECIES 430 ENSPSMG00000019726 ENSPSMG00000019736 ODC1 (ENSPSMG00000019773) #30 HPCAL1 (ENSPSMG00000019803) #28 RRM2 (ENSPSMG00000019823) #16 CYS1 (ENSPSMG00000019836) #17 KLF11 (ENSPSMG00000019846) #18 GRHL1 (ENSPSMG00000019897) #19 TAF1B (ENSPSMG00000019984) #21 YWHAQ (ENSPSMG00000020036) #22 ADAM17 (ENSPSMG00000020083) #23 IAH1 (ENSPSMG00000020104) #24 CPSF3 (ENSPSMG00000020174) #25 ENSPSMG00000020223 #26 ASAP2 (ENSPSMG00000020266) #27 MBOAT2 (ENSPSMG00000020319) #15 KIDINS220 (ENSPSMG00000020495) #14 ID2 (ENSPSMG00000020546) #12 ENSPSMG00000020553 RNF144A (ENSPSMG00000020570) #11 CMPK2 (ENSPSMG00000020579) #9 SOX11 (ENSPSMG00000020583) #8 DCDC2C (ENSPSMG00000020594) ALLC (ENSPSMG00000020625) Coquerels sifaka MODERN SPECIES 178 YWHAQ (ENSPCOG00000027184) #22 ENSPCOG00000023761 ADAM17 (ENSPCOG00000027775) #23 IAH1 (ENSPCOG00000023355) #24 CPSF3 (ENSPCOG00000023016) #25 ENSPCOG00000023364 #26 ASAP2 (ENSPCOG00000019755) #27 MBOAT2 (ENSPCOG00000009724) #15 ENSPCOG00000021299 KIDINS220 (ENSPCOG00000004733) #14 ID2 (ENSPCOG00000027288) #12 RNF144A (ENSPCOG00000022449) #11 RSAD2 (ENSPCOG00000009941) #10 CMPK2 (ENSPCOG00000026777) #9 SOX11 (ENSPCOG00000027861) #8 Laurasiatheria ANCESTRAL SPECIES 13 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Eulipotyphla ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.a #22 Common shrew MODERN SPECIES 10985 YWHAQ (ENSSARG00000012476) #22 Laurasiatheria_a ANCESTRAL SPECIES 17 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Artiodactyla ANCESTRAL SPECIES 16 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Suina ANCESTRAL SPECIES 13 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00940000159468 ENSGT00390000014122.i.b.a.b Chacoan peccary MODERN SPECIES 775 ROCK2 (ENSCWAG00000013496) SLC66A3 (ENSCWAG00000013371) #37 C2orf50 (ENSCWAG00000013327) #36 KCNF1 (ENSCWAG00000013309) #35 PDIA6 (ENSCWAG00000013173) #34 ATP6V1C2 (ENSCWAG00000012466) #33 NOL10 (ENSCWAG00000012218) #32 ODC1 (ENSCWAG00000012155) #30 HPCAL1 (ENSCWAG00000012123) #28 RRM2 (ENSCWAG00000012081) #16 CYS1 (ENSCWAG00000012002) #17 KLF11 (ENSCWAG00000011855) #18 GRHL1 (ENSCWAG00000011623) #19 TAF1B (ENSCWAG00000011471) #21 YWHAQ (ENSCWAG00000011406) #22 ADAM17 (ENSCWAG00000011306) #23 IAH1 (ENSCWAG00000011129) #24 CPSF3 (ENSCWAG00000011057) #25 ITGB1BP1 (ENSCWAG00000010974) #26 ASAP2 (ENSCWAG00000010606) #27 MBOAT2 (ENSCWAG00000010541) #15 KIDINS220 (ENSCWAG00000010112) #14 ID2 (ENSCWAG00000010057) #12 RNF144A (ENSCWAG00000010020) #11 RSAD2 (ENSCWAG00000009959) #10 CMPK2 (ENSCWAG00000009912) #9 SOX11 (ENSCWAG00000009865) #8 DCDC2C (ENSCWAG00000009777) COLEC11 (ENSCWAG00000009361) RPS7 (ENSCWAG00000009286) Artiodactyla_a ANCESTRAL SPECIES 15 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.k #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Camelidae ANCESTRAL SPECIES 12 ENSGT01100000263518.A.a.a.b ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.k #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00390000001793 ENSGT00940000159468 ENSGT00390000014122.i.b.a.b ENSGT00390000003466 Arabian camel MODERN SPECIES 6 GREB1 (ENSCDRG00005003633) E2F6 (ENSCDRG00005003569) ROCK2 (ENSCDRG00005003503) SLC66A3 (ENSCDRG00005003399) #37 C2orf50 (ENSCDRG00005003354) #36 PDIA6 (ENSCDRG00005021479) #34 ATP6V1C2 (ENSCDRG00005021467) #33 NOL10 (ENSCDRG00005021454) #32 ODC1 (ENSCDRG00005021445) #30 HPCAL1 (ENSCDRG00005021441) #28 RRM2 (ENSCDRG00005021436) #16 KLF11 (ENSCDRG00005021426) #18 GRHL1 (ENSCDRG00005021421) #19 TAF1B (ENSCDRG00005021414) #21 ENSCDRG00005021412 YWHAQ (ENSCDRG00005021407) #22 ADAM17 (ENSCDRG00005021400) #23 IAH1 (ENSCDRG00005021394) #24 CPSF3 (ENSCDRG00005021386) #25 ITGB1BP1 (ENSCDRG00005021375) #26 ASAP2 (ENSCDRG00005016761) #27 MBOAT2 (ENSCDRG00005016283) #15 KIDINS220 (ENSCDRG00005015440) #14 ID2 (ENSCDRG00005015367) #12 RNF144A (ENSCDRG00005015339) #11 RSAD2 (ENSCDRG00005015263) #10 CMPK2 (ENSCDRG00005015247) #9 ALLC (ENSCDRG00005014851) COLEC11 (ENSCDRG00005014714) ENSCDRG00005014654 ADI1 (ENSCDRG00005014498) Alpaca MODERN SPECIES 64 YWHAQ (ENSVPAG00000008047) #22 ADAM17 (ENSVPAG00000008045) #23 IAH1 (ENSVPAG00000008044) #24 CPSF3 (ENSVPAG00000008041) #25 Artiodactyla_b ANCESTRAL SPECIES 14 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.k #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Pecora ANCESTRAL SPECIES 5 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.fb.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.k #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00950000182858.B.a.d ENSGT00950000182858.B.b.b ENSGT00950000182858.B.b.a Percora_a ANCESTRAL SPECIES 13 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.fb.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.k #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00990000204082 ENSGT00950000182858.B.a.d ENSGT00950000182858.B.b.b ENSGT00950000182858.B.b.a ENSGT00940000155853 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 64 GLRA1 (ENSMMSG00000003073) NMUR2 (ENSMMSG00000003100) GRIA1 (ENSMMSG00000003129) FAM114A2 (ENSMMSG00000003214) ENSMMSG00000003251 GALNT10 (ENSMMSG00000003282) SAP30L (ENSMMSG00000003388) HAND1 (ENSMMSG00000003405) LARP1 (ENSMMSG00000003430) FAXDC2 (ENSMMSG00000003482) CNOT8 (ENSMMSG00000003528) ENSMMSG00000003559 GEMIN5 (ENSMMSG00000003579) MRPL22 (ENSMMSG00000003627) ENSMMSG00000003656 ENSMMSG00000003676 #22 ENSMMSG00000003690 ENSMMSG00000003707 SGCD (ENSMMSG00000003727) TIMD4 (ENSMMSG00000003764) ENSMMSG00000003791 ENSMMSG00000003800 ENSMMSG00000003817 HAVCR2 (ENSMMSG00000003829) MED7 (ENSMMSG00000003843) GARIN3 (ENSMMSG00000003849) ITK (ENSMMSG00000003869) CYFIP2 (ENSMMSG00000003916) FNDC9 (ENSMMSG00000003985) NIPAL4 (ENSMMSG00000003992) ADAM19 (ENSMMSG00000004015) Siberian musk deer MODERN SPECIES 238 ROCK2 (ENSMMSG00000001542) SLC66A3 (ENSMMSG00000001508) #37 C2orf50 (ENSMMSG00000001487) #36 KCNF1 (ENSMMSG00000001477) #35 PDIA6 (ENSMMSG00000001421) #34 ENSMMSG00000001405 ATP6V1C2 (ENSMMSG00000001335) #33 NOL10 (ENSMMSG00000001168) #32 ENSMMSG00000001108 #30 HPCAL1 (ENSMMSG00000001078) #28 ENSMMSG00000001037 #16 CYS1 (ENSMMSG00000001021) #17 KLF11 (ENSMMSG00000001004) #18 GRHL1 (ENSMMSG00000000910) #19 TAF1B (ENSMMSG00000000824) #21 YWHAQ (ENSMMSG00000000770) #22 ADAM17 (ENSMMSG00000000759) #23 ENSMMSG00000000723 #24 CPSF3 (ENSMMSG00000000621) #25 ENSMMSG00000000578 #26 ASAP2 (ENSMMSG00000000274) #27 MBOAT2 (ENSMMSG00000003927) #15 KIDINS220 (ENSMMSG00000003882) #14 ID2 (ENSMMSG00000003856) #12 RNF144A (ENSMMSG00000003832) #11 RSAD2 (ENSMMSG00000003822) #10 CMPK2 (ENSMMSG00000003809) #9 ENSMMSG00000003776 ENSMMSG00000003765 ENSMMSG00000003739 ENSMMSG00000003726 Bovidae ANCESTRAL SPECIES 5 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.fb.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.k #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00950000182858.B.a.d ENSGT00950000182858.B.b.b ENSGT00950000182858.B.b.a Caprinae ANCESTRAL SPECIES 9 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.fb.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699.d #25 ENSGT00390000003990.k #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464.a #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000154706.ib ENSGT00950000182858.B.a.d ENSGT00950000182858.B.b.b Rambouillet Sheep MODERN SPECIES 19 E2F6 (ENSOARG00020011096) ROCK2 (ENSOARG00020010271) SLC66A3 (ENSOARG00020010159) #37 C2orf50 (ENSOARG00020010067) #36 KCNF1 (ENSOARG00020010045) #35 PDIA6 (ENSOARG00020009823) #34 ATP6V1C2 (ENSOARG00020009600) #33 NOL10 (ENSOARG00020009305) #32 ODC1 (ENSOARG00020009225) #30 HPCAL1 (ENSOARG00020009151) #28 ENSOARG00020009097 #16 CYS1 (ENSOARG00020009035) #17 KLF11 (ENSOARG00020008965) #18 GRHL1 (ENSOARG00020008773) #19 TAF1B (ENSOARG00020008727) #21 YWHAQ (ENSOARG00020008682) #22 ADAM17 (ENSOARG00020008512) #23 IAH1 (ENSOARG00020008401) #24 CPSF3 (ENSOARG00020008301) #25 ITGB1BP1 (ENSOARG00020008178) #26 ASAP2 (ENSOARG00020007758) #27 MBOAT2 (ENSOARG00020007653) #15 KIDINS220 (ENSOARG00020007030) #14 ID2 (ENSOARG00020006940) #12 RNF144A (ENSOARG00020006856) #11 ENSOARG00020006787 #10 CMPK2 (ENSOARG00020006720) #9 ENSOARG00020006589 #10 ENSOARG00020006554 ENSOARG00020016131 ENSOARG00020016051 Goat DUPLICATION Goat MODERN SPECIES 2 SLC66A3 (ENSCHIG00000016355) #37 C2orf50 (ENSCHIG00000019292) #36 KCNF1 (ENSCHIG00000012739) #35 PDIA6 (ENSCHIG00000007838) #34 ATP6V1C2 (ENSCHIG00000017272) #33 NOL10 (ENSCHIG00000012935) #32 ENSCHIG00000027003 #30 HPCAL1 (ENSCHIG00000019475) #28 RRM2 (ENSCHIG00000009694) #16 ENSCHIG00000004531 CYS1 (ENSCHIG00000018115) #17 KLF11 (ENSCHIG00000011294) #18 ENSCHIG00000026755 #19 TAF1B (ENSCHIG00000013783) #21 ENSCHIG00000012158 YWHAQ (ENSCHIG00000012589) #22 ADAM17 (ENSCHIG00000013595) #23 IAH1 (ENSCHIG00000016467) #24 CPSF3 (ENSCHIG00000013973) #25 ENSCHIG00000020028 #26 ASAP2 (ENSCHIG00000022796) #27 ENSCHIG00000012410 MBOAT2 (ENSCHIG00000026251) #15 KIDINS220 (ENSCHIG00000026710) #14 ENSCHIG00000018361 #12 RNF144A (ENSCHIG00000016336) #11 RSAD2 (ENSCHIG00000021832) #10 CMPK2 (ENSCHIG00000012790) #9 SOX11 (ENSCHIG00000024868) #8 ENSCHIG00000014881 ENSCHIG00000021333 Goat MODERN SPECIES 14 NISCH (ENSCHIG00000017539) ENSCHIG00000023133 NT5DC2 (ENSCHIG00000023928) UQCC5 (ENSCHIG00000010104) ENSCHIG00000006551 PBRM1 (ENSCHIG00000018542) GNL3 (ENSCHIG00000022181) GLT8D1 (ENSCHIG00000014311) SPCS1 (ENSCHIG00000000545) NEK4 (ENSCHIG00000017522) ITIH1 (ENSCHIG00000022850) ITIH3 (ENSCHIG00000024683) ITIH4 (ENSCHIG00000013634) MUSTN1 (ENSCHIG00000020792) STIMATE (ENSCHIG00000014968) ENSCHIG00000023126 #22 SFMBT1 (ENSCHIG00000010563) RFT1 (ENSCHIG00000015387) PRKCD (ENSCHIG00000015193) TKT (ENSCHIG00000021864) DCP1A (ENSCHIG00000023880) CACNA1D (ENSCHIG00000019488) CHDH (ENSCHIG00000010045) IL17RB (ENSCHIG00000024237) ACTR8 (ENSCHIG00000015327) SELENOK (ENSCHIG00000023798) LRTM1 (ENSCHIG00000018537) CACNA2D3 (ENSCHIG00000023040) WNT5A (ENSCHIG00000016131) ERC2 (ENSCHIG00000001877) CCDC66 (ENSCHIG00000025264) Bovinae ANCESTRAL SPECIES 4 ENSGT00990000203553.c.b.o.b ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.fb.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.k #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00990000204082 ENSGT00950000182858.B.a.d ENSGT00950000182858.B.b.b ENSGT00950000182858.B.b.a.e ENSGT00940000155853 American bison MODERN SPECIES 3221 ENSBBBG00000011612 ROCK2 (ENSBBBG00000011669) SLC66A3 (ENSBBBG00000011693) #37 C2orf50 (ENSBBBG00000011703) #36 KCNF1 (ENSBBBG00000002161) #35 ENSBBBG00000011712 ENSBBBG00000011729 #34 ATP6V1C2 (ENSBBBG00000011779) #33 NOL10 (ENSBBBG00000002209) #32 ODC1 (ENSBBBG00000011893) #30 HPCAL1 (ENSBBBG00000007122) #28 RRM2 (ENSBBBG00000011911) #16 KLF11 (ENSBBBG00000011923) #18 GRHL1 (ENSBBBG00000011949) #19 TAF1B (ENSBBBG00000011961) #21 YWHAQ (ENSBBBG00000011974) #22 ADAM17 (ENSBBBG00000002244) #23 IAH1 (ENSBBBG00000008101) #24 CPSF3 (ENSBBBG00000012019) #25 ITGB1BP1 (ENSBBBG00000012050) #26 ENSBBBG00000012059 ASAP2 (ENSBBBG00000012138) #27 MBOAT2 (ENSBBBG00000012157) #15 ENSBBBG00000012162 KIDINS220 (ENSBBBG00000012237) #14 ID2 (ENSBBBG00000012256) #12 RNF144A (ENSBBBG00000007447) #11 RSAD2 (ENSBBBG00000012264) #10 ENSBBBG00000012270 ENSBBBG00000012273 ENSBBBG00000002313 Bos ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.a #22 Bos_b ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.a #22 Hybrid Bos Indicus MODERN SPECIES 2 SLC66A3 (ENSBIXG00005022531) #37 C2orf50 (ENSBIXG00005022500) #36 KCNF1 (ENSBIXG00005022457) #35 ENSBIXG00005007689 #34 ENSBIXG00005007375 #33 ENSBIXG00005022288 NOL10 (ENSBIXG00005022242) #32 ENSBIXG00005022099 #30 HPCAL1 (ENSBIXG00005006887) #28 RRM2 (ENSBIXG00005022029) #16 ENSBIXG00005003712 #17 KLF11 (ENSBIXG00005021989) #18 GRHL1 (ENSBIXG00005003698) #19 TAF1B (ENSBIXG00005021864) #21 ENSBIXG00005021842 YWHAQ (ENSBIXG00005021830) #22 ADAM17 (ENSBIXG00005002613) #23 IAH1 (ENSBIXG00005021763) #24 CPSF3 (ENSBIXG00005003653) #25 ITGB1BP1 (ENSBIXG00005021598) #26 ASAP2 (ENSBIXG00005021521) #27 MBOAT2 (ENSBIXG00005021383) #15 KIDINS220 (ENSBIXG00005021201) #14 ID2 (ENSBIXG00005020723) #12 RNF144A (ENSBIXG00005020588) #11 RSAD2 (ENSBIXG00005020552) #10 CMPK2 (ENSBIXG00005003470) #9 SOX11 (ENSBIXG00005020448) #8 ENSBIXG00005020418 ENSBIXG00005020391 ENSBIXG00005020351 Bos_a ANCESTRAL SPECIES 6 ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646.c #34 ENSGT00390000004263.b #33 ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.a.a.a.a.a.a ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.fb.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.k #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 Wild yak MODERN SPECIES 1783 YWHAQ (ENSBMUG00000003324) #22 ADAM17 (ENSBMUG00000003344) #23 IAH1 (ENSBMUG00000003367) #24 CPSF3 (ENSBMUG00000003413) #25 ITGB1BP1 (ENSBMUG00000003480) #26 ASAP2 (ENSBMUG00000003572) #27 ENSBMUG00000003596 MBOAT2 (ENSBMUG00000003625) #15 KIDINS220 (ENSBMUG00000003783) #14 ID2 (ENSBMUG00000003840) #12 Domestic yak MODERN SPECIES 28 ENSBGRG00000024734 #34 ENSBGRG00000024848 #33 ENSBGRG00000024916 NOL10 (ENSBGRG00000024949) #32 ENSBGRG00000010565 ENSBGRG00000010591 #30 HPCAL1 (ENSBGRG00000010770) #28 RRM2 (ENSBGRG00000010858) #16 CYS1 (ENSBGRG00000011167) #17 KLF11 (ENSBGRG00000011215) #18 ENSBGRG00000011303 GRHL1 (ENSBGRG00000011381) #19 TAF1B (ENSBGRG00000012581) #21 ENSBGRG00000012787 ENSBGRG00000012819 ##22 YWHAQ (ENSBGRG00000012872) #22 ADAM17 (ENSBGRG00000012923) #23 IAH1 (ENSBGRG00000013251) #24 CPSF3 (ENSBGRG00000013338) #25 ITGB1BP1 (ENSBGRG00000013746) #26 ASAP2 (ENSBGRG00000013865) #27 MBOAT2 (ENSBGRG00000014129) #15 KIDINS220 (ENSBGRG00000014341) #14 ENSBGRG00000015325 ID2 (ENSBGRG00000015396) #12 RNF144A (ENSBGRG00000015479) #11 RSAD2 (ENSBGRG00000015611) #10 CMPK2 (ENSBGRG00000015652) #9 SOX11 (ENSBGRG00000015914) #8 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 19 NETO1 (ENSCHYG00000024335) FBXO15 (ENSCHYG00000024414) TIMM21 (ENSCHYG00000024465) ENSCHYG00000024552 C18orf63 (ENSCHYG00000024641) ENSCHYG00000024713 CNDP2 (ENSCHYG00000024751) ZNF407 (ENSCHYG00000024817) PTGR3 (ENSCHYG00000024859) TSHZ1 (ENSCHYG00000024880) ZNF516 (ENSCHYG00000024900) ZNF236 (ENSCHYG00000024966) ENSCHYG00000025218 MBP (ENSCHYG00000025251) GALR1 (ENSCHYG00000025374) ENSCHYG00000025397 #22 SALL3 (ENSCHYG00000025411) ATP9B (ENSCHYG00000025490) NFATC1 (ENSCHYG00000025717) ENSCHYG00000025845 CTDP1 (ENSCHYG00000025858) KCNG2 (ENSCHYG00000025901) SLC66A2 (ENSCHYG00000025926) HSBP1L1 (ENSCHYG00000025985) TXNL4A (ENSCHYG00000026004) ENSCHYG00000026029 RBFA (ENSCHYG00000026035) ADNP2 (ENSCHYG00000014078) PARD6G (ENSCHYG00000014295) ENSCHYG00000014347 ENSCHYG00000014407 Yarkand deer MODERN SPECIES 2 ENSCHYG00000009170 SLC66A3 (ENSCHYG00000009293) #37 C2orf50 (ENSCHYG00000009330) #36 KCNF1 (ENSCHYG00000009374) #35 PDIA6 (ENSCHYG00000009406) #34 ATP6V1C2 (ENSCHYG00000009711) #33 NOL10 (ENSCHYG00000010137) #32 ENSCHYG00000011027 #30 HPCAL1 (ENSCHYG00000011179) #28 ENSCHYG00000011216 ENSCHYG00000011258 #16 KLF11 (ENSCHYG00000011297) #18 GRHL1 (ENSCHYG00000011321) #19 TAF1B (ENSCHYG00000011467) #21 ENSCHYG00000011680 YWHAQ (ENSCHYG00000011701) #22 ADAM17 (ENSCHYG00000011771) #23 IAH1 (ENSCHYG00000012019) #24 CPSF3 (ENSCHYG00000012112) #25 ENSCHYG00000012310 #26 ASAP2 (ENSCHYG00000012499) #27 ENSCHYG00000013479 MBOAT2 (ENSCHYG00000013496) #15 KIDINS220 (ENSCHYG00000013747) #14 ID2 (ENSCHYG00000015082) #12 RNF144A (ENSCHYG00000015190) #11 RSAD2 (ENSCHYG00000015364) #10 CMPK2 (ENSCHYG00000015445) #9 ENSCHYG00000015614 ENSCHYG00000015664 ENSCHYG00000016003 Yarkand deer MODERN SPECIES 10 ENSCHYG00000024429 ENSCHYG00000024409 TFDP2 (ENSCHYG00000024201) GK5 (ENSCHYG00000024077) XRN1 (ENSCHYG00000023362) ATR (ENSCHYG00000022692) PLS1 (ENSCHYG00000022526) TRPC1 (ENSCHYG00000022264) PCOLCE2 (ENSCHYG00000022135) PAQR9 (ENSCHYG00000022114) U2SURP (ENSCHYG00000021811) CHST2 (ENSCHYG00000021770) SLC9A9 (ENSCHYG00000021601) DIPK2A (ENSCHYG00000021529) ENSCHYG00000021484 ENSCHYG00000021457 #22 PLOD2 (ENSCHYG00000020638) ENSCHYG00000020380 ENSCHYG00000020311 Cetacea ANCESTRAL SPECIES 16 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.db.b #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.k #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00940000159468 ENSGT00390000014122.i.b.a.b Blue whale DUPLICATION Blue whale MODERN SPECIES HHIPL2 (ENSBMSG00010003643) TAF1A (ENSBMSG00010003619) MIA3 (ENSBMSG00010003604) ENSBMSG00010003582 BROX (ENSBMSG00010003525) FAM177B (ENSBMSG00010003511) DISP1 (ENSBMSG00010003492) TLR5 (ENSBMSG00010003485) SUSD4 (ENSBMSG00010003469) ENSBMSG00010003457 ENSBMSG00010003450 CAPN8 (ENSBMSG00010003404) CAPN2 (ENSBMSG00010003346) TP53BP2 (ENSBMSG00010003281) FBXO28 (ENSBMSG00010003253) ENSBMSG00010003239 #22 DEGS1 (ENSBMSG00010003230) NVL (ENSBMSG00010003127) CNIH4 (ENSBMSG00010003094) WDR26 (ENSBMSG00010003042) CNIH3 (ENSBMSG00010003002) ENSBMSG00010002975 ENSBMSG00010002972 ENSBMSG00010002963 LBR (ENSBMSG00010002944) ENSBMSG00010002887 ENSBMSG00010002862 ENSBMSG00010002850 EPHX1 (ENSBMSG00010002828) TMEM63A (ENSBMSG00010002709) ENSBMSG00010002682 Blue whale MODERN SPECIES 4 C2orf50 (ENSBMSG00010017406) #36 KCNF1 (ENSBMSG00010017441) #35 PDIA6 (ENSBMSG00010017505) #34 ATP6V1C2 (ENSBMSG00010017714) #33 NOL10 (ENSBMSG00010018130) #32 ENSBMSG00010018302 #30 HPCAL1 (ENSBMSG00010018376) #28 ENSBMSG00010018397 RRM2 (ENSBMSG00010018407) #16 CYS1 (ENSBMSG00010018428) #17 KLF11 (ENSBMSG00010018472) #18 ENSBMSG00010018599 #19 ENSBMSG00010018631 #19 TAF1B (ENSBMSG00010018671) #21 ENSBMSG00010018704 YWHAQ (ENSBMSG00010018734) #22 ADAM17 (ENSBMSG00010018804) #23 ENSBMSG00010018884 #24 CPSF3 (ENSBMSG00010018925) #25 ENSBMSG00010019013 #26 ASAP2 (ENSBMSG00010019066) #27 MBOAT2 (ENSBMSG00010019136) #15 KIDINS220 (ENSBMSG00010019274) #14 ID2 (ENSBMSG00010019337) #12 RNF144A (ENSBMSG00010019394) #11 RSAD2 (ENSBMSG00010019426) #10 CMPK2 (ENSBMSG00010019458) #9 DCDC2C (ENSBMSG00010019611) COLEC11 (ENSBMSG00010019717) RPS7 (ENSBMSG00010019975) RNASEH1 (ENSBMSG00010013874) Odontoceti ANCESTRAL SPECIES 15 ENSGT00940000168548 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.db.b #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.k #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00940000159468 ENSGT00390000014122.i.b.a.b Sperm whale MODERN SPECIES 3 LRATD1 (ENSPCTG00005014256) ENSPCTG00005014216 ENSPCTG00005014135 ENSPCTG00005014060 ROCK2 (ENSPCTG00005014000) PQLC3 (ENSPCTG00005013870) #37 KCNF1 (ENSPCTG00005013707) #35 PDIA6 (ENSPCTG00005013450) #34 ATP6V1C2 (ENSPCTG00005013317) #33 NOL10 (ENSPCTG00005013060) #32 ODC1 (ENSPCTG00005012986) #30 HPCAL1 (ENSPCTG00005012942) #28 RRM2 (ENSPCTG00005012888) #16 ENSPCTG00005012849 #19 TAF1B (ENSPCTG00005012791) #21 YWHAQ (ENSPCTG00005012710) #22 ENSPCTG00005012664 ADAM17 (ENSPCTG00005012570) #23 IAH1 (ENSPCTG00005012450) #24 CPSF3 (ENSPCTG00005011872) #25 ENSPCTG00005011637 #26 ENSPCTG00005011590 ASAP2 (ENSPCTG00005011387) #27 MBOAT2 (ENSPCTG00005011265) #15 KIDINS220 (ENSPCTG00005011195) #14 RNF144A (ENSPCTG00005011143) #11 RSAD2 (ENSPCTG00005011072) #10 CMPK2 (ENSPCTG00005011012) #9 ENSPCTG00005010966 COLEC11 (ENSPCTG00005010632) RPS7 (ENSPCTG00005010552) Odontoceti_a ANCESTRAL SPECIES 12 ENSGT00940000168548 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.db.b #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.k #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00940000159468 ENSGT00390000014122.i.b.a.b Dolphin MODERN SPECIES 1074 YWHAQ (ENSTTRG00000000871) #22 ADAM17 (ENSTTRG00000000868) #23 IAH1 (ENSTTRG00000000865) #24 CPSF3 (ENSTTRG00000000861) #25 ITGB1BP1 (ENSTTRG00000000859) #26 ASAP2 (ENSTTRG00000000856) #27 Odontoceti_b ANCESTRAL SPECIES 15 ENSGT00940000168548 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.db.b #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.k #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00940000159468 ENSGT00390000014122.i.b.a.b Monodontidae ANCESTRAL SPECIES 13 ENSGT00940000168548 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.db.b #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.k #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00940000159468 ENSGT00390000014122.i.b.a.b ENSGT00390000003466 ENSGT00390000008195.d.b Narwhal MODERN SPECIES 305 E2F6 (ENSMMNG00015006595) ROCK2 (ENSMMNG00015006633) ENSMMNG00015006662 SLC66A3 (ENSMMNG00015006697) #37 KCNF1 (ENSMMNG00015006742) #35 PDIA6 (ENSMMNG00015006773) #34 ATP6V1C2 (ENSMMNG00015006876) #33 NOL10 (ENSMMNG00015006937) #32 ENSMMNG00015006983 #30 HPCAL1 (ENSMMNG00015007009) #28 ENSMMNG00015007031 #16 CYS1 (ENSMMNG00015007058) #17 KLF11 (ENSMMNG00015007075) #18 GRHL1 (ENSMMNG00015007097) #19 TAF1B (ENSMMNG00015007142) #21 YWHAQ (ENSMMNG00015007193) #22 ADAM17 (ENSMMNG00015007247) #23 IAH1 (ENSMMNG00015007332) #24 CPSF3 (ENSMMNG00015007400) #25 ITGB1BP1 (ENSMMNG00015007476) #26 ASAP2 (ENSMMNG00015007585) #27 MBOAT2 (ENSMMNG00015007697) #15 KIDINS220 (ENSMMNG00015007796) #14 ID2 (ENSMMNG00015007903) #12 RNF144A (ENSMMNG00015007925) #11 SOX11 (ENSMMNG00015007940) #8 ENSMMNG00015007954 COLEC11 (ENSMMNG00015007976) ENSMMNG00015008005 RNASEH1 (ENSMMNG00015008036) ADI1 (ENSMMNG00015008063) Beluga whale MODERN SPECIES 37 ENSDLEG00000004536 ENSDLEG00000004551 ENSDLEG00000004566 PQLC3 (ENSDLEG00000004589) #37 KCNF1 (ENSDLEG00000004602) #35 PDIA6 (ENSDLEG00000004606) #34 ATP6V1C2 (ENSDLEG00000004632) #33 NOL10 (ENSDLEG00000004668) #32 ODC1 (ENSDLEG00000004685) #30 HPCAL1 (ENSDLEG00000004713) #28 ENSDLEG00000004724 #16 CYS1 (ENSDLEG00000004756) #17 KLF11 (ENSDLEG00000004778) #18 GRHL1 (ENSDLEG00000004790) #19 TAF1B (ENSDLEG00000004806) #21 YWHAQ (ENSDLEG00000004846) #22 ADAM17 (ENSDLEG00000004858) #23 ENSDLEG00000004471 IAH1 (ENSDLEG00000004484) #24 CPSF3 (ENSDLEG00000004493) #25 ITGB1BP1 (ENSDLEG00000004511) #26 ASAP2 (ENSDLEG00000004523) #27 MBOAT2 (ENSDLEG00000004585) #15 KIDINS220 (ENSDLEG00000004637) #14 ID2 (ENSDLEG00000004751) #12 RNF144A (ENSDLEG00000004760) #11 ENSDLEG00000004773 Vaquita MODERN SPECIES 4 ENSPSNG00000004435 E2F6 (ENSPSNG00000004405) ROCK2 (ENSPSNG00000004347) SLC66A3 (ENSPSNG00000004284) #37 KCNF1 (ENSPSNG00000022584) #35 PDIA6 (ENSPSNG00000022580) #34 ATP6V1C2 (ENSPSNG00000022577) #33 NOL10 (ENSPSNG00000022572) #32 ENSPSNG00000022567 #30 HPCAL1 (ENSPSNG00000022565) #28 ENSPSNG00000022562 #16 CYS1 (ENSPSNG00000022560) #17 KLF11 (ENSPSNG00000022558) #18 GRHL1 (ENSPSNG00000022556) #19 TAF1B (ENSPSNG00000022554) #21 YWHAQ (ENSPSNG00000022551) #22 ADAM17 (ENSPSNG00000022548) #23 IAH1 (ENSPSNG00000022542) #24 CPSF3 (ENSPSNG00000022538) #25 ENSPSNG00000022534 #26 ASAP2 (ENSPSNG00000022513) #27 MBOAT2 (ENSPSNG00000022501) #15 KIDINS220 (ENSPSNG00000022485) #14 ID2 (ENSPSNG00000022474) #12 RNF144A (ENSPSNG00000022468) #11 RSAD2 (ENSPSNG00000022461) #10 CMPK2 (ENSPSNG00000022458) #9 SOX11 (ENSPSNG00000022450) #8 DCDC2C (ENSPSNG00000022437) COLEC11 (ENSPSNG00000022428) ENSPSNG00000022424 Laurasiatheria_b ANCESTRAL SPECIES 17 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Carnivora ANCESTRAL SPECIES 19 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Felidae ANCESTRAL SPECIES 3 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Panthera ANCESTRAL SPECIES 2 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 ENSGT00390000014122.i.b.a.b Tiger MODERN SPECIES 581 ODC1 (ENSPTIG00000007491) #30 RRM2 (ENSPTIG00000007390) #16 KLF11 (ENSPTIG00000007061) #18 GRHL1 (ENSPTIG00000007003) #19 TAF1B (ENSPTIG00000006228) #21 YWHAQ (ENSPTIG00000006178) #22 ADAM17 (ENSPTIG00000005404) #23 IAH1 (ENSPTIG00000005299) #24 CPSF3 (ENSPTIG00000003920) #25 ITGB1BP1 (ENSPTIG00000002156) #26 ASAP2 (ENSPTIG00000000985) #27 MBOAT2 (ENSPTIG00000020033) #15 KIDINS220 (ENSPTIG00000019843) #14 ID2 (ENSPTIG00000019724) #12 RNF144A (ENSPTIG00000019714) #11 RSAD2 (ENSPTIG00000019625) #10 ENSPTIG00000019591 DCDC2C (ENSPTIG00000019551) ALLC (ENSPTIG00000019525) RPS7 (ENSPTIG00000019474) RNASEH1 (ENSPTIG00000019034) Panthera_a ANCESTRAL SPECIES 1 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 ENSGT00390000014122.i.b.a.b lion MODERN SPECIES 3 ROCK2 (ENSPLOG00000003439) SLC66A3 (ENSPLOG00000003412) #37 C2orf50 (ENSPLOG00000003392) #36 KCNF1 (ENSPLOG00000003383) #35 PDIA6 (ENSPLOG00000003350) #34 ATP6V1C2 (ENSPLOG00000003251) #33 NOL10 (ENSPLOG00000003174) #32 ODC1 (ENSPLOG00000003104) #30 HPCAL1 (ENSPLOG00000003090) #28 RRM2 (ENSPLOG00000003069) #16 CYS1 (ENSPLOG00000003056) #17 KLF11 (ENSPLOG00000003042) #18 GRHL1 (ENSPLOG00000002984) #19 TAF1B (ENSPLOG00000002921) #21 ENSPLOG00000002895 YWHAQ (ENSPLOG00000002873) #22 ADAM17 (ENSPLOG00000002823) #23 IAH1 (ENSPLOG00000002790) #24 CPSF3 (ENSPLOG00000002732) #25 ITGB1BP1 (ENSPLOG00000002692) #26 ASAP2 (ENSPLOG00000002531) #27 MBOAT2 (ENSPLOG00000002421) #15 KIDINS220 (ENSPLOG00000002235) #14 ID2 (ENSPLOG00000002192) #12 RNF144A (ENSPLOG00000002146) #11 RSAD2 (ENSPLOG00000002128) #10 CMPK2 (ENSPLOG00000002115) #9 ALLC (ENSPLOG00000002071) COLEC11 (ENSPLOG00000002030) RPS7 (ENSPLOG00000001995) RNASEH1 (ENSPLOG00000001905) leopard MODERN SPECIES E2F6 (ENSPPRG00000018702) ROCK2 (ENSPPRG00000018610) SLC66A3 (ENSPPRG00000018314) #37 C2orf50 (ENSPPRG00000018217) #36 KCNF1 (ENSPPRG00000020006) #35 PDIA6 (ENSPPRG00000018159) #34 ATP6V1C2 (ENSPPRG00000018018) #33 NOL10 (ENSPPRG00000017868) #32 ODC1 (ENSPPRG00000017534) #30 HPCAL1 (ENSPPRG00000017486) #28 ENSPPRG00000017433 #28 RRM2 (ENSPPRG00000017387) #16 KLF11 (ENSPPRG00000017354) #18 GRHL1 (ENSPPRG00000017279) #19 TAF1B (ENSPPRG00000017125) #21 YWHAQ (ENSPPRG00000017069) #22 ENSPPRG00000017043 ADAM17 (ENSPPRG00000016991) #23 IAH1 (ENSPPRG00000016876) #24 CPSF3 (ENSPPRG00000016790) #25 ITGB1BP1 (ENSPPRG00000016726) #26 ASAP2 (ENSPPRG00000016539) #27 MBOAT2 (ENSPPRG00000016261) #15 KIDINS220 (ENSPPRG00000016171) #14 ID2 (ENSPPRG00000015804) #12 ENSPPRG00000015776 #12 RNF144A (ENSPPRG00000015759) #11 RSAD2 (ENSPPRG00000015738) #10 CMPK2 (ENSPPRG00000015716) #9 DCDC2C (ENSPPRG00000015663) ALLC (ENSPPRG00000015621) Caniformia ANCESTRAL SPECIES 18 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Canidae ANCESTRAL SPECIES 46 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Red fox MODERN SPECIES 76 E2F6 (ENSVVUG00000001169) ROCK2 (ENSVVUG00000001206) PQLC3 (ENSVVUG00000001281) #37 CUNH2orf50 (ENSVVUG00000001296) #36 KCNF1 (ENSVVUG00000001317) #35 PDIA6 (ENSVVUG00000001332) #34 ATP6V1C2 (ENSVVUG00000001351) #33 NOL10 (ENSVVUG00000001394) #32 ENSVVUG00000001420 ODC1 (ENSVVUG00000001437) #30 HPCAL1 (ENSVVUG00000001457) #28 RRM2 (ENSVVUG00000001484) #16 KLF11 (ENSVVUG00000001585) #18 GRHL1 (ENSVVUG00000001610) #19 TAF1B (ENSVVUG00000001641) #21 YWHAQ (ENSVVUG00000002125) #22 ADAM17 (ENSVVUG00000002136) #23 IAH1 (ENSVVUG00000002169) #24 CPSF3 (ENSVVUG00000002194) #25 ITGB1BP1 (ENSVVUG00000002216) #26 ASAP2 (ENSVVUG00000002403) #27 MBOAT2 (ENSVVUG00000002534) #15 KIDINS220 (ENSVVUG00000003457) #14 ID2 (ENSVVUG00000008464) #12 RNF144A (ENSVVUG00000008507) #11 RSAD2 (ENSVVUG00000008530) #10 ENSVVUG00000008545 ENSVVUG00000008555 ENSVVUG00000008582 ALLC (ENSVVUG00000008603) COLEC11 (ENSVVUG00000008618) Canis_lupus ANCESTRAL SPECIES 10 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Dingo MODERN SPECIES 223 E2F6 (ENSCAFG00020026554) ROCK2 (ENSCAFG00020026578) SLC66A3 (ENSCAFG00020026709) #37 C2orf50 (ENSCAFG00020026711) #36 KCNF1 (ENSCAFG00020026713) #35 PDIA6 (ENSCAFG00020026714) #34 ATP6V1C2 (ENSCAFG00020026718) #33 NOL10 (ENSCAFG00020026722) #32 ODC1 (ENSCAFG00020026728) #30 HPCAL1 (ENSCAFG00020026737) #28 RRM2 (ENSCAFG00020026744) #16 CYS1 (ENSCAFG00020026758) #17 KLF11 (ENSCAFG00020026763) #18 GRHL1 (ENSCAFG00020026767) #19 TAF1B (ENSCAFG00020026787) #21 YWHAQ (ENSCAFG00020026795) #22 ENSCAFG00020026796 #23 IAH1 (ENSCAFG00020026797) #24 CPSF3 (ENSCAFG00020026799) #25 ITGB1BP1 (ENSCAFG00020000149) #26 ASAP2 (ENSCAFG00020000377) #27 MBOAT2 (ENSCAFG00020001936) #15 KIDINS220 (ENSCAFG00020002173) #14 ID2 (ENSCAFG00020004823) #12 RNF144A (ENSCAFG00020004868) #11 RSAD2 (ENSCAFG00020004883) #10 ENSCAFG00020004906 SOX11 (ENSCAFG00020004918) #8 DCDC2C (ENSCAFG00020004927) ALLC (ENSCAFG00020004959) COLEC11 (ENSCAFG00020004967) Dog DUPLICATION Dog MODERN SPECIES 33 SLC35F2 (ENSCAFG00845003658) ENSCAFG00845003675 SLN (ENSCAFG00845003683) ELMOD1 (ENSCAFG00845003730) ALKBH8 (ENSCAFG00845003777) CWF19L2 (ENSCAFG00845003823) GUCY1A2 (ENSCAFG00845003912) ENSCAFG00845003965 AASDHPPT (ENSCAFG00845004003) KBTBD3 (ENSCAFG00845004053) MSANTD4 (ENSCAFG00845000215) GRIA4 (ENSCAFG00845000279) ENSCAFG00845000322 CASP4 (ENSCAFG00845000375) CASP12 (ENSCAFG00845000482) ENSCAFG00845000587 #22 ENSCAFG00845000601 PDGFD (ENSCAFG00845000627) DDI1 (ENSCAFG00845000650) ENSCAFG00845000669 ENSCAFG00845000695 ENSCAFG00845000714 DCUN1D5 (ENSCAFG00845000732) MMP13 (ENSCAFG00845000761) MMP12 (ENSCAFG00845000798) MMP3 (ENSCAFG00845000842) MMP1 (ENSCAFG00845000871) MMP8 (ENSCAFG00845000899) MMP27 (ENSCAFG00845000933) MMP20 (ENSCAFG00845000974) MMP7 (ENSCAFG00845000992) Dog MODERN SPECIES 8 E2F6 (ENSCAFG00845028092) ROCK2 (ENSCAFG00845027461) SLC66A3 (ENSCAFG00845027286) #37 C2orf50 (ENSCAFG00845027230) #36 KCNF1 (ENSCAFG00845027200) #35 PDIA6 (ENSCAFG00845026954) #34 ATP6V1C2 (ENSCAFG00845026644) #33 NOL10 (ENSCAFG00845026340) #32 ODC1 (ENSCAFG00845026175) #30 HPCAL1 (ENSCAFG00845026130) #28 RRM2 (ENSCAFG00845025952) #16 CYS1 (ENSCAFG00845025907) #17 KLF11 (ENSCAFG00845025845) #18 GRHL1 (ENSCAFG00845025614) #19 TAF1B (ENSCAFG00845025510) #21 YWHAQ (ENSCAFG00845025457) #22 ADAM17 (ENSCAFG00845024728) #23 IAH1 (ENSCAFG00845024429) #24 CPSF3 (ENSCAFG00845024218) #25 ITGB1BP1 (ENSCAFG00845024064) #26 ASAP2 (ENSCAFG00845023702) #27 MBOAT2 (ENSCAFG00845023611) #15 KIDINS220 (ENSCAFG00845023013) #14 ID2 (ENSCAFG00845022749) #12 RNF144A (ENSCAFG00845022407) #11 RSAD2 (ENSCAFG00845022316) #10 CMPK2 (ENSCAFG00845022277) #9 SOX11 (ENSCAFG00845022195) #8 DCDC2C (ENSCAFG00845022069) ALLC (ENSCAFG00845021988) COLEC11 (ENSCAFG00845021783) Caniformia_b ANCESTRAL SPECIES 11 ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Ursidae ANCESTRAL SPECIES 9 ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00390000012138.a.a.j.s ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Giant Panda MODERN SPECIES 14 E2F6 (ENSAMEG00000011667) ROCK2 (ENSAMEG00000011596) ENSAMEG00000026567 SLC66A3 (ENSAMEG00000011583) #37 C2orf50 (ENSAMEG00000011580) #36 KCNF1 (ENSAMEG00000019267) #35 ENSAMEG00000011555 #34 ATP6V1C2 (ENSAMEG00000011506) #33 NOL10 (ENSAMEG00000011438) #32 ODC1 (ENSAMEG00000011415) #30 HPCAL1 (ENSAMEG00000029791) #28 RRM2 (ENSAMEG00000011372) #16 KLF11 (ENSAMEG00000011355) #18 GRHL1 (ENSAMEG00000011320) #19 TAF1B (ENSAMEG00000011301) #21 YWHAQ (ENSAMEG00000008618) #22 ADAM17 (ENSAMEG00000008569) #23 IAH1 (ENSAMEG00000008545) #24 CPSF3 (ENSAMEG00000008493) #25 ITGB1BP1 (ENSAMEG00000008478) #26 ASAP2 (ENSAMEG00000008406) #27 ENSAMEG00000024246 MBOAT2 (ENSAMEG00000008373) #15 KIDINS220 (ENSAMEG00000008328) #14 ID2 (ENSAMEG00000026711) #12 RNF144A (ENSAMEG00000013324) #11 RSAD2 (ENSAMEG00000013333) #10 CMPK2 (ENSAMEG00000013345) #9 SOX11 (ENSAMEG00000013354) #8 ENSAMEG00000026778 ALLC (ENSAMEG00000018438) Ursus ANCESTRAL SPECIES 125 ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00390000012138.a.a.j.s.a ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00390000001793 ENSGT00940000159468 ENSGT00390000014122.i.b.a.b Polar bear MODERN SPECIES 89 GREB1 (ENSUMAG00000002360) E2F6 (ENSUMAG00000002414) ROCK2 (ENSUMAG00000002537) SLC66A3 (ENSUMAG00000003286) #37 C2orf50 (ENSUMAG00000003297) #36 KCNF1 (ENSUMAG00000003301) #35 PDIA6 (ENSUMAG00000003308) #34 ATP6V1C2 (ENSUMAG00000003318) #33 NOL10 (ENSUMAG00000003385) #32 ODC1 (ENSUMAG00000003406) #30 HPCAL1 (ENSUMAG00000003415) #28 RRM2 (ENSUMAG00000003431) #16 KLF11 (ENSUMAG00000003481) #18 GRHL1 (ENSUMAG00000003494) #19 TAF1B (ENSUMAG00000003559) #21 YWHAQ (ENSUMAG00000003646) #22 ADAM17 (ENSUMAG00000003653) #23 ENSUMAG00000003662 #24 ENSUMAG00000003666 #24 CPSF3 (ENSUMAG00000003676) #25 ITGB1BP1 (ENSUMAG00000003689) #26 ASAP2 (ENSUMAG00000003695) #27 ENSUMAG00000003713 MBOAT2 (ENSUMAG00000003744) #15 KIDINS220 (ENSUMAG00000003833) #14 ID2 (ENSUMAG00000003840) #12 RNF144A (ENSUMAG00000003876) #11 RSAD2 (ENSUMAG00000003893) #10 ENSUMAG00000003902 ENSUMAG00000003909 ENSUMAG00000003916 Mustelinae ANCESTRAL SPECIES 55 ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00990000204082 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Ferret MODERN SPECIES 178 C2orf50 (ENSMPUG00000013541) #36 ENSMPUG00000013537 KCNF1 (ENSMPUG00000019481) #35 PDIA6 (ENSMPUG00000013530) #34 ENSMPUG00000019480 ATP6V1C2 (ENSMPUG00000013450) #33 NOL10 (ENSMPUG00000013325) #32 ODC1 (ENSMPUG00000013321) #30 HPCAL1 (ENSMPUG00000013302) #28 RRM2 (ENSMPUG00000013295) #16 KLF11 (ENSMPUG00000013287) #18 ENSMPUG00000013281 ENSMPUG00000013277 GRHL1 (ENSMPUG00000013263) #19 TAF1B (ENSMPUG00000013256) #21 YWHAQ (ENSMPUG00000013252) #22 ENSMPUG00000013249 ADAM17 (ENSMPUG00000013236) #23 IAH1 (ENSMPUG00000013218) #24 CPSF3 (ENSMPUG00000013213) #25 ITGB1BP1 (ENSMPUG00000013210) #26 ASAP2 (ENSMPUG00000013197) #27 MBOAT2 (ENSMPUG00000013191) #15 KIDINS220 (ENSMPUG00000013181) #14 ID2 (ENSMPUG00000013178) #12 ENSMPUG00000013173 ENSMPUG00000013172 RNF144A (ENSMPUG00000013154) #11 RSAD2 (ENSMPUG00000013146) #10 CMPK2 (ENSMPUG00000013134) #9 ENSMPUG00000019479 American mink MODERN SPECIES 7 GREB1 (ENSNVIG00000014163) E2F6 (ENSNVIG00000014248) ROCK2 (ENSNVIG00000014361) SLC66A3 (ENSNVIG00000014450) #37 C2orf50 (ENSNVIG00000014464) #36 KCNF1 (ENSNVIG00000014487) #35 PDIA6 (ENSNVIG00000014505) #34 ATP6V1C2 (ENSNVIG00000014715) #33 NOL10 (ENSNVIG00000014778) #32 DCOR (ENSNVIG00000014941) #30 ENSNVIG00000014964 RRM2 (ENSNVIG00000014985) #16 KLF11 (ENSNVIG00000015016) #18 GRHL1 (ENSNVIG00000015046) #19 TAF1B (ENSNVIG00000015127) #21 YWHAQ (ENSNVIG00000015162) #22 ADAM17 (ENSNVIG00000015197) #23 IAH1 (ENSNVIG00000015262) #24 CPSF3 (ENSNVIG00000015301) #25 ITGB1BP1 (ENSNVIG00000015345) #26 ASAP2 (ENSNVIG00000015416) #27 MBOAT2 (ENSNVIG00000015525) #15 KIDINS220 (ENSNVIG00000015535) #14 ID2 (ENSNVIG00000015663) #12 R144A (ENSNVIG00000015685) #11 RSAD2 (ENSNVIG00000015718) #10 ENSNVIG00000015750 SOX11 (ENSNVIG00000015756) #8 DCDC2C (ENSNVIG00000015778) ALLC (ENSNVIG00000015809) COLEC11 (ENSNVIG00000015826) Laurasiatheria_c ANCESTRAL SPECIES 14 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Equus ANCESTRAL SPECIES 7 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Donkey MODERN SPECIES 26 E2F6 (ENSEASG00005008212) ROCK2 (ENSEASG00005005236) ENSEASG00005034683 #37 C2orf50 (ENSEASG00005004947) #36 KCNF1 (ENSEASG00005027361) #35 PDIA6 (ENSEASG00005004942) #34 ATP6V1C2 (ENSEASG00005004932) #33 NOL10 (ENSEASG00005004919) #32 ENSEASG00005004910 #30 HPCAL1 (ENSEASG00005004903) #28 RRM2 (ENSEASG00005004892) #16 CYS1 (ENSEASG00005025190) #17 KLF11 (ENSEASG00005004881) #18 GRHL1 (ENSEASG00005028173) #19 TAF1B (ENSEASG00005004803) #21 YWHAQ (ENSEASG00005004792) #22 ADAM17 (ENSEASG00005004001) #23 ENSEASG00005026278 #24 CPSF3 (ENSEASG00005003970) #25 ITGB1BP1 (ENSEASG00005003969) #26 ASAP2 (ENSEASG00005000562) #27 MBOAT2 (ENSEASG00005000101) #15 KIDINS220 (ENSEASG00005000060) #14 ID2 (ENSEASG00005000025) #12 RNF144A (ENSEASG00005022228) #11 RSAD2 (ENSEASG00005022224) #10 CMPK2 (ENSEASG00005022223) #9 ENSEASG00005035871 #8 ENSEASG00005022219 ALLC (ENSEASG00005022214) COLEC11 (ENSEASG00005037869) Chiroptera ANCESTRAL SPECIES 10 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Microchiroptera ANCESTRAL SPECIES 14 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Greater horseshoe bat MODERN SPECIES 4 ROCK2 (ENSRFEG00010007837) SLC66A3 (ENSRFEG00010008070) #37 C2orf50 (ENSRFEG00010008148) #36 KCNF1 (ENSRFEG00010008182) #35 PDIA6 (ENSRFEG00010008218) #34 ATP6V1C2 (ENSRFEG00010008402) #33 NOL10 (ENSRFEG00010008527) #32 ODC1 (ENSRFEG00010008653) #30 HPCAL1 (ENSRFEG00010008686) #28 ENSRFEG00010008723 #16 CYS1 (ENSRFEG00010008838) #17 KLF11 (ENSRFEG00010008867) #18 GRHL1 (ENSRFEG00010008922) #19 ENSRFEG00010009191 TAF1B (ENSRFEG00010009242) #21 YWHAQ (ENSRFEG00010009419) #22 ADAM17 (ENSRFEG00010009462) #23 IAH1 (ENSRFEG00010009506) #24 CPSF3 (ENSRFEG00010009573) #25 ITGB1BP1 (ENSRFEG00010009640) #26 ASAP2 (ENSRFEG00010009716) #27 ENSRFEG00010009824 ENSRFEG00010009833 MBOAT2 (ENSRFEG00010009854) #15 KIDINS220 (ENSRFEG00010009917) #14 ENSRFEG00010010062 #12 RNF144A (ENSRFEG00010010097) #11 RSAD2 (ENSRFEG00010010140) #10 CMPK2 (ENSRFEG00010010183) #9 ENSRFEG00010010195 SOX11 (ENSRFEG00010010241) #8 Microbat MODERN SPECIES 1345 GREB1 (ENSMLUG00000000221) ENSMLUG00000003384 ROCK2 (ENSMLUG00000015664) SLC66A3 (ENSMLUG00000015653) #37 PDIA6 (ENSMLUG00000012215) #34 ATP6V1C2 (ENSMLUG00000012207) #33 NOL10 (ENSMLUG00000012309) #32 ENSMLUG00000010423 #30 RRM2 (ENSMLUG00000010596) #16 KLF11 (ENSMLUG00000002295) #18 GRHL1 (ENSMLUG00000002290) #19 TAF1B (ENSMLUG00000002273) #21 YWHAQ (ENSMLUG00000005383) #22 ADAM17 (ENSMLUG00000010676) #23 IAH1 (ENSMLUG00000010667) #24 CPSF3 (ENSMLUG00000010636) #25 ITGB1BP1 (ENSMLUG00000010629) #26 Atlantogenata ANCESTRAL SPECIES 14 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT01050000247847 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Afrotheria ANCESTRAL SPECIES 26 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT01050000247847 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Afrotheria_a ANCESTRAL SPECIES 26 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT01050000247847 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00390000001793 ENSGT00940000159468 ENSGT00390000014122.i.b.a.b Elephant MODERN SPECIES 197 ROCK2 (ENSLAFG00000007153) SLC66A3 (ENSLAFG00000025769) #37 C2orf50 (ENSLAFG00000026090) #36 ENSLAFG00000026811 KCNF1 (ENSLAFG00000008774) #35 PDIA6 (ENSLAFG00000012281) #34 ATP6V1C2 (ENSLAFG00000022630) #33 NOL10 (ENSLAFG00000010489) #32 ODC1 (ENSLAFG00000005330) #30 HPCAL1 (ENSLAFG00000004069) #28 RRM2 (ENSLAFG00000003627) #16 ENSLAFG00000026037 KLF11 (ENSLAFG00000032182) #18 GRHL1 (ENSLAFG00000009330) #19 TAF1B (ENSLAFG00000000782) #21 YWHAQ (ENSLAFG00000009482) #22 ADAM17 (ENSLAFG00000009473) #23 IAH1 (ENSLAFG00000009469) #24 CPSF3 (ENSLAFG00000009467) #25 ITGB1BP1 (ENSLAFG00000009036) #26 ASAP2 (ENSLAFG00000009029) #27 MBOAT2 (ENSLAFG00000008586) #15 KIDINS220 (ENSLAFG00000014141) #14 ID2 (ENSLAFG00000006910) #12 RNF144A (ENSLAFG00000001936) #11 RSAD2 (ENSLAFG00000017097) #10 CMPK2 (ENSLAFG00000031856) #9 SOX11 (ENSLAFG00000006327) #8 ENSLAFG00000026156 ENSLAFG00000027245 ALLC (ENSLAFG00000013751) Xenarthra ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.a #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 1154 CCNL1 (ENSDNOG00000009325) ENSDNOG00000039650 ENSDNOG00000031446 ENSDNOG00000046381 TIPARP (ENSDNOG00000006676) ENSDNOG00000048811 ENSDNOG00000000752 KCNAB1 (ENSDNOG00000000745) ENSDNOG00000038913 ENSDNOG00000019348 GMPS (ENSDNOG00000017772) ENSDNOG00000040652 SLC33A1 (ENSDNOG00000045008) C3orf33 (ENSDNOG00000031969) PLCH1 (ENSDNOG00000008919) ENSDNOG00000041013 #22 Armadillo MODERN SPECIES 4115 ENSDNOG00000049371 CDKL4 (ENSDNOG00000017497) ENSDNOG00000032679 #22 ENSDNOG00000037246 MAP4K3 (ENSDNOG00000007464) ENSDNOG00000036443 TMEM178A (ENSDNOG00000039682) THUMPD2 (ENSDNOG00000019834) ENSDNOG00000010490 Eutheria ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Atlantogenata ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Afrotheria ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Afrotheria_a ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Hyrax MODERN SPECIES 2436 ENSPCAG00000003037 ##22 Xenarthra ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Armadillo MODERN SPECIES 1501 TBKBP1 (ENSDNOG00000040744) KPNB1 (ENSDNOG00000014546) NPEPPS (ENSDNOG00000031577) ENSDNOG00000036102 ##22 MRPL45 (ENSDNOG00000010131) GPR179 (ENSDNOG00000049094) SOCS7 (ENSDNOG00000006042) ARHGAP23 (ENSDNOG00000031001) SRCIN1 (ENSDNOG00000032047) Sloth MODERN SPECIES 2683 ENSCHOG00000004661 ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Primates DUPLICATION Primates ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.a ##22 Platyrrhini ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.a ##22 Cebidae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.a ##22 Cebidae_a ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.a ##22 Bolivian squirrel monkey MODERN SPECIES 112 ENSSBOG00000010479 ABCB5 (ENSSBOG00000033428) ENSSBOG00000031119 ENSSBOG00000022288 SP4 (ENSSBOG00000026933) ENSSBOG00000028226 ENSSBOG00000017440 DNAH11 (ENSSBOG00000025701) CDCA7L (ENSSBOG00000019253) RAPGEF5 (ENSSBOG00000031232) IL6 (ENSSBOG00000023961) ENSSBOG00000003308 HYCC1 (ENSSBOG00000033769) ENSSBOG00000028644 ##22 KLHL7 (ENSSBOG00000030300) NUP42 (ENSSBOG00000030576) GPNMB (ENSSBOG00000021795) MALSU1 (ENSSBOG00000018985) IGF2BP3 (ENSSBOG00000019579) ENSSBOG00000036184 TRA2A (ENSSBOG00000031562) CCDC126 (ENSSBOG00000018628) ENSSBOG00000032133 FAM221A (ENSSBOG00000021284) STK31 (ENSSBOG00000033536) ENSSBOG00000006781 NPY (ENSSBOG00000023880) PALS2 (ENSSBOG00000020815) GSDME (ENSSBOG00000023554) Catarrhini ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.a ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.a ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.a ##22 Vervet Monkey MODERN SPECIES 5 ROCK2 (ENSCSAG00000007439) SLC66A3 (ENSCSAG00000007311) #37 C2orf50 (ENSCSAG00000007293) #36 KCNF1 (ENSCSAG00000000374) #35 PDIA6 (ENSCSAG00000007282) #34 ATP6V1C2 (ENSCSAG00000007259) #33 NOL10 (ENSCSAG00000007229) #32 ENSCSAG00000007220 #30 HPCAL1 (ENSCSAG00000007213) #28 RRM2 (ENSCSAG00000007201) #16 ENSCSAG00000007172 CYS1 (ENSCSAG00000007167) #17 KLF11 (ENSCSAG00000007163) #18 GRHL1 (ENSCSAG00000007158) #19 TAF1B (ENSCSAG00000007150) #21 ENSCSAG00000007145 ##22 ADAM17 (ENSCSAG00000007138) #23 IAH1 (ENSCSAG00000007130) #24 CPSF3 (ENSCSAG00000007125) #25 ITGB1BP1 (ENSCSAG00000007115) #26 ASAP2 (ENSCSAG00000007108) #27 MBOAT2 (ENSCSAG00000007093) #15 KIDINS220 (ENSCSAG00000007084) #14 ID2 (ENSCSAG00000007060) #12 RNF144A (ENSCSAG00000007058) #11 RSAD2 (ENSCSAG00000007051) #10 CMPK2 (ENSCSAG00000007040) #9 ENSCSAG00000007025 SOX11 (ENSCSAG00000000373) #8 DCDC2C (ENSCSAG00000007016) ALLC (ENSCSAG00000006987) Hominoidea ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.a ##22 Gibbon MODERN SPECIES 2 FMO4 (ENSNLEG00000015167) PRRC2C (ENSNLEG00000015178) ENSNLEG00000032220 MYOC (ENSNLEG00000015190) ENSNLEG00000031746 VAMP4 (ENSNLEG00000015204) ENSNLEG00000031601 METTL13 (ENSNLEG00000015209) DNM3 (ENSNLEG00000015220) PIGC (ENSNLEG00000015248) C1orf105 (ENSNLEG00000015241) SUCO (ENSNLEG00000015249) FASLG (ENSNLEG00000015271) ENSNLEG00000035559 TNFSF18 (ENSNLEG00000015274) ENSNLEG00000005189 ##22 ENSNLEG00000028459 ENSNLEG00000030473 TNFSF4 (ENSNLEG00000015276) PRDX6 (ENSNLEG00000034494) ENSNLEG00000033412 SLC9C2 (ENSNLEG00000015286) TEX50 (ENSNLEG00000015295) ANKRD45 (ENSNLEG00000015292) KLHL20 (ENSNLEG00000015296) CENPL (ENSNLEG00000015305) DARS2 (ENSNLEG00000015309) ZBTB37 (ENSNLEG00000015319) SERPINC1 (ENSNLEG00000015323) RC3H1 (ENSNLEG00000015327) ENSNLEG00000015342 Tarsier DUPLICATION Tarsier MODERN SPECIES 6833 ENSTSYG00000030569 ##22 Tarsier MODERN SPECIES 546 ENSTSYG00000032139 ##22 Strepsirrhini ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.a ##22 Lemuriformes ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.a ##22 Mouse lemur MODERN SPECIES 11 ENSMICG00000046505 PRPF3 (ENSMICG00000015386) RPRD2 (ENSMICG00000007991) TARS2 (ENSMICG00000008016) ECM1 (ENSMICG00000044220) ADAMTSL4 (ENSMICG00000008061) MCL1 (ENSMICG00000034250) ENSMICG00000029534 ENSA (ENSMICG00000004996) GOLPH3L (ENSMICG00000027785) HORMAD1 (ENSMICG00000036889) ENSMICG00000027297 CTSS (ENSMICG00000032451) CTSK (ENSMICG00000005853) ARNT (ENSMICG00000005872) ENSMICG00000034737 ##22 CTXND2 (ENSMICG00000044474) SETDB1 (ENSMICG00000000425) CERS2 (ENSMICG00000000441) ANXA9 (ENSMICG00000000445) MINDY1 (ENSMICG00000000449) PRUNE1 (ENSMICG00000000451) BNIPL (ENSMICG00000000460) C1orf56 (ENSMICG00000000470) CDC42SE1 (ENSMICG00000045944) GABPB2 (ENSMICG00000006802) SEMA6C (ENSMICG00000006866) LYSMD1 (ENSMICG00000026636) SCNM1 (ENSMICG00000047233) TMOD4 (ENSMICG00000006822) VPS72 (ENSMICG00000006827) Primates ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b ##22 Haplorrhini ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b ##22 Simiiformes ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b ##22 Catarrhini ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b ##22 Macaca DUPLICATION Macaca ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b.a ##22 Pig-tailed macaque MODERN SPECIES 274 MME (ENSMNEG00000044087) GPR149 (ENSMNEG00000036775) ENSMNEG00000034754 DHX36 (ENSMNEG00000039762) ARHGEF26 (ENSMNEG00000021008) RAP2B (ENSMNEG00000027958) P2RY1 (ENSMNEG00000021059) ENSMNEG00000041435 ##22 MBNL1 (ENSMNEG00000031295) SUCNR1 (ENSMNEG00000029118) Macaca_a ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b.a ##22 Crab-eating macaque MODERN SPECIES 11 SSR3 (ENSMFAG00000065033) KCNAB1 (ENSMFAG00000032077) ENSMFAG00000035446 GMPS (ENSMFAG00000039350) SLC33A1 (ENSMFAG00000057969) C3orf33 (ENSMFAG00000004239) ENSMFAG00000039668 PLCH1 (ENSMFAG00000042166) STRIT1 (ENSMFAG00000039645) MME (ENSMFAG00000039633) GPR149 (ENSMFAG00000030860) DHX36 (ENSMFAG00000032288) ARHGEF26 (ENSMFAG00000031011) RAP2B (ENSMFAG00000006078) P2RY1 (ENSMFAG00000005982) ENSMFAG00000039510 ##22 ENSMFAG00000064185 MBNL1 (ENSMFAG00000001066) SUCNR1 (ENSMFAG00000064553) AADACL2 (ENSMFAG00000042922) ENSMFAG00000058559 ENSMFAG00000040086 AADAC (ENSMFAG00000031479) IGSF10 (ENSMFAG00000002055) ENSMFAG00000053187 P2RY12 (ENSMFAG00000036474) P2RY13 (ENSMFAG00000043480) GPR87 (ENSMFAG00000003685) P2RY14 (ENSMFAG00000030384) GPR171 (ENSMFAG00000030882) MED12L (ENSMFAG00000044786) Macaca ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b.b ##22 Pig-tailed macaque MODERN SPECIES 126 TIFA (ENSMNEG00000018769) ENSMNEG00000037689 ALPK1 (ENSMNEG00000035578) ENSMNEG00000036856 NEUROG2 (ENSMNEG00000006870) ZGRF1 (ENSMNEG00000031300) LARP7 (ENSMNEG00000034758) ENSMNEG00000032481 ANK2 (ENSMNEG00000039312) CAMK2D (ENSMNEG00000045488) ARSJ (ENSMNEG00000032901) ENSMNEG00000022132 UGT8 (ENSMNEG00000036824) NDST4 (ENSMNEG00000035599) ENSMNEG00000042964 ENSMNEG00000033966 ##22 TRAM1L1 (ENSMNEG00000025342) NDST3 (ENSMNEG00000033435) PRSS12 (ENSMNEG00000043650) ENSMNEG00000043767 METTL14 (ENSMNEG00000032737) SEC24D (ENSMNEG00000035401) SYNPO2 (ENSMNEG00000030337) MYOZ2 (ENSMNEG00000021579) USP53 (ENSMNEG00000035179) ENSMNEG00000030057 FABP2 (ENSMNEG00000036803) PDE5A (ENSMNEG00000016569) MAD2L1 (ENSMNEG00000040691) ENSMNEG00000025951 PRDM5 (ENSMNEG00000019018) Hominoidea ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b ##22 Hominidae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b ##22 Pan ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b ##22 Bonobo MODERN SPECIES 14 ENSPPAG00000036122 ROCK2 (ENSPPAG00000038618) SLC66A3 (ENSPPAG00000026752) #37 C2orf50 (ENSPPAG00000042216) #36 KCNF1 (ENSPPAG00000042656) #35 PDIA6 (ENSPPAG00000028754) #34 ATP6V1C2 (ENSPPAG00000028894) #33 NOL10 (ENSPPAG00000010631) #32 ODC1 (ENSPPAG00000004476) #30 HPCAL1 (ENSPPAG00000032513) #28 RRM2 (ENSPPAG00000040070) #16 ENSPPAG00000010181 KLF11 (ENSPPAG00000030099) #18 GRHL1 (ENSPPAG00000030977) #19 TAF1B (ENSPPAG00000031684) #21 ENSPPAG00000043019 ##22 ADAM17 (ENSPPAG00000038185) #23 IAH1 (ENSPPAG00000033783) #24 CPSF3 (ENSPPAG00000042457) #25 ITGB1BP1 (ENSPPAG00000039328) #26 ASAP2 (ENSPPAG00000008883) #27 ENSPPAG00000043888 MBOAT2 (ENSPPAG00000043445) #15 KIDINS220 (ENSPPAG00000041858) #14 ID2 (ENSPPAG00000034410) #12 RNF144A (ENSPPAG00000037389) #11 RSAD2 (ENSPPAG00000039493) #10 ENSPPAG00000037362 ENSPPAG00000036968 ENSPPAG00000031455 DCDC2C (ENSPPAG00000035755) Platyrrhini ANCESTRAL SPECIES 45 ENSGT01030000234517.D ENSGT00940000153916.B.e #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.y.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT01090000260040.b.b.b.b.a.b.b ##22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.c #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Cebidae ANCESTRAL SPECIES 40 ENSGT01030000234517.D ENSGT00940000153916.B.f #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.y.a.b #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT01090000260040.b.b.b.b.a.b.b ##22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.c #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Cebidae_a ANCESTRAL SPECIES 46 ENSGT01030000234517.D ENSGT00940000153916.B.f #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.y.a.b #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT01090000260040.b.b.b.b.a.b.b ##22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.c #26 ENSGT00940000155623 #27 ENSGT00390000015789.c.b ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 Bolivian squirrel monkey MODERN SPECIES 63 GREB1 (ENSSBOG00000026787) E2F6 (ENSSBOG00000032095) ROCK2 (ENSSBOG00000026163) SLC66A3 (ENSSBOG00000021893) #37 C2orf50 (ENSSBOG00000027050) #36 KCNF1 (ENSSBOG00000032364) #35 PDIA6 (ENSSBOG00000016573) #34 ATP6V1C2 (ENSSBOG00000020727) #33 NOL10 (ENSSBOG00000025651) #32 ODC1 (ENSSBOG00000034688) #30 HPCAL1 (ENSSBOG00000026513) #28 ENSSBOG00000022360 #16 KLF11 (ENSSBOG00000018899) #18 GRHL1 (ENSSBOG00000011486) #19 TAF1B (ENSSBOG00000028943) #21 ENSSBOG00000033831 ##22 ADAM17 (ENSSBOG00000035331) #23 IAH1 (ENSSBOG00000019617) #24 CPSF3 (ENSSBOG00000027263) #25 ENSSBOG00000031545 #26 ASAP2 (ENSSBOG00000021237) #27 ENSSBOG00000029937 MBOAT2 (ENSSBOG00000034820) #15 KIDINS220 (ENSSBOG00000026153) #14 ID2 (ENSSBOG00000033610) #12 RNF144A (ENSSBOG00000019246) #11 RSAD2 (ENSSBOG00000024280) #10 ENSSBOG00000028588 #9 ENSSBOG00000029283 Strepsirrhini ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b ##22 Lemuriformes ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.b ##22 Mouse lemur MODERN SPECIES 26 CYP26B1 (ENSMICG00000016464) DYSF (ENSMICG00000010232) ZNF638 (ENSMICG00000005419) PAIP2B (ENSMICG00000030507) NAGK (ENSMICG00000007070) TEX261 (ENSMICG00000031861) ANKRD53 (ENSMICG00000007049) ATP6V1B1 (ENSMICG00000005270) VAX2 (ENSMICG00000046942) CD207 (ENSMICG00000000713) FIGLA (ENSMICG00000011826) ADD2 (ENSMICG00000014589) TGFA (ENSMICG00000030189) ENSMICG00000034467 ENSMICG00000045047 ENSMICG00000030362 ##22 FAM136A (ENSMICG00000042469) ENSMICG00000015369 ENSMICG00000000328 ENSMICG00000027526 TIA1 (ENSMICG00000002434) C2orf42 (ENSMICG00000030784) PCBP1 (ENSMICG00000038221) ASPRV1 (ENSMICG00000004975) MXD1 (ENSMICG00000004973) ENSMICG00000038189 ENSMICG00000012008 ANXA4 (ENSMICG00000012000) AAK1 (ENSMICG00000003788) ENSMICG00000044702 GFPT1 (ENSMICG00000035387) Euarchontoglires_A ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Tree shrew MODERN SPECIES 2529 KLF11 (ENSTBEG00000008268) #18 GRHL1 (ENSTBEG00000007777) #19 TAF1B (ENSTBEG00000006430) #21 ENSTBEG00000006122 ##22 ADAM17 (ENSTBEG00000004343) #23 CPSF3 (ENSTBEG00000002707) #25 ITGB1BP1 (ENSTBEG00000001622) #26 ENSTBEG00000008035 #27 Glires ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Lagomorpha ANCESTRAL SPECIES 233 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.b ##22 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 Pika MODERN SPECIES 2207 ENSOPRG00000009027 #19 TAF1B (ENSOPRG00000008998) #21 ENSOPRG00000008991 ##22 ADAM17 (ENSOPRG00000008960) #23 IAH1 (ENSOPRG00000008947) #24 CPSF3 (ENSOPRG00000008902) #25 ITGB1BP1 (ENSOPRG00000008887) #26 ENSOPRG00000008852 #27 Rodentia ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Rodentia_A ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Sciuridae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Marmotini ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Marmotini_b ANCESTRAL SPECIES 17 ENSGT00390000008041.C ENSGT00940000155734.q ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.v.b #16 ENSGT00940000155982.b #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.b ##22 ENSGT00940000155443 #23 ENSGT00390000008069.k.a #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Squirrel MODERN SPECIES 132 NTSR2 (ENSSTOG00000010000) GREB1 (ENSSTOG00000026032) E2F6 (ENSSTOG00000003316) ROCK2 (ENSSTOG00000002624) SLC66A3 (ENSSTOG00000027023) #37 C2orf50 (ENSSTOG00000002600) #36 PDIA6 (ENSSTOG00000005550) #34 ATP6V1C2 (ENSSTOG00000005527) #33 NOL10 (ENSSTOG00000005485) #32 ENSSTOG00000000386 #30 HPCAL1 (ENSSTOG00000001514) #28 ENSSTOG00000033669 #16 ENSSTOG00000030936 #18 GRHL1 (ENSSTOG00000019842) #19 TAF1B (ENSSTOG00000002419) #21 ENSSTOG00000024378 ##22 ADAM17 (ENSSTOG00000004510) #23 ENSSTOG00000004500 #24 CPSF3 (ENSSTOG00000004476) #25 ITGB1BP1 (ENSSTOG00000004464) #26 ASAP2 (ENSSTOG00000004398) #27 MBOAT2 (ENSSTOG00000020147) #15 KIDINS220 (ENSSTOG00000013232) #14 ID2 (ENSSTOG00000019401) #12 RNF144A (ENSSTOG00000027570) #11 RSAD2 (ENSSTOG00000006147) #10 CMPK2 (ENSSTOG00000019402) #9 DCDC2C (ENSSTOG00000020234) ALLC (ENSSTOG00000002136) COLEC11 (ENSSTOG00000020387) RPS7 (ENSSTOG00000024830) Rodentia_B ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Kangaroo rat MODERN SPECIES 339 E2f6 (ENSDORG00000013213) Rock2 (ENSDORG00000008054) Pqlc3 (ENSDORG00000025612) #37 ENSDORG00000027660 #36 Kcnf1 (ENSDORG00000026132) #35 Pdia6 (ENSDORG00000003594) #34 Atp6v1c2 (ENSDORG00000003593) #33 Nol10 (ENSDORG00000001331) #32 Odc1 (ENSDORG00000002669) #30 Hpcal1 (ENSDORG00000007055) #28 Rrm2 (ENSDORG00000002514) #16 ENSDORG00000024620 #18 ENSDORG00000024766 #19 ENSDORG00000028599 #19 Taf1b (ENSDORG00000010154) #21 ENSDORG00000028741 ##22 Adam17 (ENSDORG00000014267) #23 Cpsf3 (ENSDORG00000014263) #25 Itgb1bp1 (ENSDORG00000014262) #26 Asap2 (ENSDORG00000014261) #27 Mboat2 (ENSDORG00000007348) #15 Kidins220 (ENSDORG00000014817) #14 Id2 (ENSDORG00000014815) #12 Rnf144a (ENSDORG00000010145) #11 Rsad2 (ENSDORG00000008537) #10 Myomorpha ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Muroidea ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Muroidea_A ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Cricetidae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Cricetidae_B ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Prairie vole MODERN SPECIES Dnaaf2 (ENSMOCG00000005708) Mgat2 (ENSMOCG00000007181) ENSMOCG00000021414 Lrr1 (ENSMOCG00000018456) Rps29 (ENSMOCG00000017681) Mdga2 (ENSMOCG00000022499) ENSMOCG00000005109 Rpl10l (ENSMOCG00000009910) Mis18bp1 (ENSMOCG00000017171) Fancm (ENSMOCG00000008775) Fkbp3 (ENSMOCG00000011130) Prpf39 (ENSMOCG00000009148) Togaram1 (ENSMOCG00000021755) Klhl28 (ENSMOCG00000006562) Gm527 (ENSMOCG00000005543) ENSMOCG00000015843 ##22 Lrfn5 (ENSMOCG00000021045) ENSMOCG00000014206 ENSMOCG00000013030 Northern American deer mouse MODERN SPECIES 14 Greb1 (ENSPEMG00000020144) E2f6 (ENSPEMG00000020192) Rock2 (ENSPEMG00000020257) Pqlc3 (ENSPEMG00000020282) #37 ENSPEMG00000025861 #36 Kcnf1 (ENSPEMG00000013250) #35 Pdia6 (ENSPEMG00000002821) #34 Atp6v1c2 (ENSPEMG00000007660) #33 Nol10 (ENSPEMG00000008676) #32 Hpcal1 (ENSPEMG00000025119) #28 Rrm2 (ENSPEMG00000010359) #16 Cys1 (ENSPEMG00000025881) #17 Klf11 (ENSPEMG00000011311) #18 Grhl1 (ENSPEMG00000012157) #19 Taf1b (ENSPEMG00000013642) #21 ENSPEMG00000027877 ##22 Adam17 (ENSPEMG00000015840) #23 Iah1 (ENSPEMG00000016641) #24 Cpsf3 (ENSPEMG00000017668) #25 Itgb1bp1 (ENSPEMG00000012447) #26 Asap2 (ENSPEMG00000016930) #27 Mboat2 (ENSPEMG00000000110) #15 Kidins220 (ENSPEMG00000002148) #14 Id2 (ENSPEMG00000006926) #12 Rnf144a (ENSPEMG00000008311) #11 Rsad2 (ENSPEMG00000008928) #10 Cmpk2 (ENSPEMG00000009342) #9 Sox11 (ENSPEMG00000014211) #8 ENSPEMG00000022353 Allc (ENSPEMG00000022050) Colec11 (ENSPEMG00000021365) Cricetinae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Golden Hamster MODERN SPECIES 737 ENSMAUG00000016595 #16 Grhl1 (ENSMAUG00000013649) #19 Taf1b (ENSMAUG00000013477) #21 ENSMAUG00000017035 ##22 Adam17 (ENSMAUG00000015291) #23 Iah1 (ENSMAUG00000018865) #24 Cpsf3 (ENSMAUG00000000166) #25 Itgb1bp1 (ENSMAUG00000017998) #26 Asap2 (ENSMAUG00000001240) #27 Mboat2 (ENSMAUG00000005505) #15 Kidins220 (ENSMAUG00000011599) #14 Id2 (ENSMAUG00000012468) #12 Rnf144a (ENSMAUG00000014880) #11 Rsad2 (ENSMAUG00000008669) #10 Cmpk2 (ENSMAUG00000017501) #9 Sox11 (ENSMAUG00000016656) #8 ENSMAUG00000010849 Allc (ENSMAUG00000015102) Colec11 (ENSMAUG00000012547) Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 399 ENSCGRG00001010458 ENSCGRG00001010016 ENSCGRG00001013001 ENSCGRG00001009339 ENSCGRG00001008310 ENSCGRG00001007877 ##22 ENSCGRG00001012735 ENSCGRG00001007163 ENSCGRG00001006166 ENSCGRG00001005467 ENSCGRG00001001720 ENSCGRG00001001601 ENSCGRG00001001436 Zfp229 (ENSCGRG00001001278) ENSCGRG00001001163 ENSCGRG00001000947 ENSCGRG00001000854 ENSCGRG00001012523 Chinese hamster chok1gshd MODERN SPECIES 33 Hexim2 (ENSCGRG00001014831) Hexim1 (ENSCGRG00001002270) Acbd4 (ENSCGRG00001021379) Plcd3 (ENSCGRG00001017565) Nmt1 (ENSCGRG00001020185) Dcakd (ENSCGRG00001022814) C1ql1 (ENSCGRG00001005042) Kif18b (ENSCGRG00001009629) Gfap (ENSCGRG00001017134) Fam187a (ENSCGRG00001010685) Ccdc103 (ENSCGRG00001000145) Eftud2 (ENSCGRG00001009904) Higd1b (ENSCGRG00001000778) Gjc1 (ENSCGRG00001008773) Adam11 (ENSCGRG00001013003) ENSCGRG00001017817 ##22 Ccdc43 (ENSCGRG00001019235) Meioc (ENSCGRG00001021925) Fzd2 (ENSCGRG00001000140) Gpatch8 (ENSCGRG00001020210) Itga2b (ENSCGRG00001022417) Fam171a2 (ENSCGRG00001000671) Grn (ENSCGRG00001009446) Slc25a39 (ENSCGRG00001012093) Rundc3a (ENSCGRG00001005014) Slc4a1 (ENSCGRG00001024402) ENSCGRG00001012586 Ubtf (ENSCGRG00001014549) Atxn7l3 (ENSCGRG00001003041) ENSCGRG00001011323 Tmub2 (ENSCGRG00001019475) Murinae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Rat MODERN SPECIES 15 ENSRNOG00000071172 Cct6a-ps3 (ENSRNOG00000065568) ENSRNOG00000065369 ##22 Crispld1 (ENSRNOG00000017773) Pi15 (ENSRNOG00000017686) AABR07046657.1 (ENSRNOG00000022709) Gdap1 (ENSRNOG00000005850) Jph1 (ENSRNOG00000006110) Ly96 (ENSRNOG00000067966) Tmem70 (ENSRNOG00000006608) Eloc (ENSRNOG00000031730) Ube2w (ENSRNOG00000062415) AABR07046707.1 (ENSRNOG00000042458) ENSRNOG00000069669 Rdh10 (ENSRNOG00000006681) LOC100912291 (ENSRNOG00000047310) LOC297756 (ENSRNOG00000007238) Sbspon (ENSRNOG00000007258) Mus ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Mus_A ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Mus_B ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Mus_C ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Steppe mouse MODERN SPECIES 3380 Tgfbr2 (ENSMSIG00000006266) Rbms3 (ENSMSIG00000005814) Zcwpw2 (ENSMSIG00000005768) Azi2 (ENSMSIG00000005716) ENSMSIG00000005700 Cmc1 (ENSMSIG00000005679) Eomes (ENSMSIG00000005631) Golga4 (ENSMSIG00000005243) ENSMSIG00000005208 Itga9 (ENSMSIG00000005091) Ctdspl (ENSMSIG00000005025) Vill (ENSMSIG00000004803) Plcd1 (ENSMSIG00000004701) Dlec1 (ENSMSIG00000004438) ENSMSIG00000004415 ENSMSIG00000004409 ##22 Slc22a14 (ENSMSIG00000004351) Slc22a13 (ENSMSIG00000004275) Oxsr1 (ENSMSIG00000004125) Myd88 (ENSMSIG00000004085) ENSMSIG00000004022 Xylb (ENSMSIG00000003927) Acvr2b (ENSMSIG00000003871) Exog (ENSMSIG00000003811) ENSMSIG00000003784 Scn5a (ENSMSIG00000003219) Scn10a (ENSMSIG00000002952) ENSMSIG00000002920 Scn11a (ENSMSIG00000002716) Wdr48 (ENSMSIG00000002592) Gorasp1 (ENSMSIG00000002538) Laurasiatheria ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Eulipotyphla ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Hedgehog MODERN SPECIES 3094 ENSEEUG00000011222 ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Laurasiatheria_c ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Chiroptera ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Megabat MODERN SPECIES 1372 ENSPVAG00000005334 ##22 ADAM17 (ENSPVAG00000005332) #23 IAH1 (ENSPVAG00000005329) #24 CPSF3 (ENSPVAG00000005324) #25 ITGB1BP1 (ENSPVAG00000005320) #26 ASAP2 (ENSPVAG00000005303) #27 Carnivora ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Caniformia ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Caniformia_b ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Ursidae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Ursus ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 American black bear MODERN SPECIES 1136 ENSUAMG00000007526 ##22 ADAM17 (ENSUAMG00000007528) #23 IAH1 (ENSUAMG00000007531) #24 CPSF3 (ENSUAMG00000007535) #25 ITGB1BP1 (ENSUAMG00000007538) #26 ASAP2 (ENSUAMG00000007571) #27 ENSUAMG00000007716 Canidae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Red fox MODERN SPECIES 61 ELMOD1 (ENSVVUG00000014009) ALKBH8 (ENSVVUG00000013994) ENSVVUG00000013987 ENSVVUG00000013985 GUCY1A2 (ENSVVUG00000013971) ENSVVUG00000013969 ENSVVUG00000013968 AASDHPPT (ENSVVUG00000013961) KBTBD3 (ENSVVUG00000013959) MSANTD4 (ENSVVUG00000013957) ENSVVUG00000013955 GRIA4 (ENSVVUG00000013946) ENSVVUG00000013932 ENSVVUG00000013918 CASP12 (ENSVVUG00000013915) ENSVVUG00000013912 ##22 ENSVVUG00000013893 DDI1 (ENSVVUG00000013892) PDGFD (ENSVVUG00000013885) DYNC2H1 (ENSVVUG00000012126) ENSVVUG00000012007 MMP13 (ENSVVUG00000011996) MMP12 (ENSVVUG00000011970) MMP3 (ENSVVUG00000011962) MMP1 (ENSVVUG00000011949) MMP8 (ENSVVUG00000010844) MMP27 (ENSVVUG00000010759) MMP20 (ENSVVUG00000010743) MMP7 (ENSVVUG00000010731) ENSVVUG00000010725 ENSVVUG00000010721 Artiodactyla ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Suina ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Chacoan peccary MODERN SPECIES 98 PAIP1 (ENSCWAG00000001763) NNT (ENSCWAG00000001681) FGF10 (ENSCWAG00000001661) MRPS30 (ENSCWAG00000001645) HCN1 (ENSCWAG00000001630) EMB (ENSCWAG00000001588) PARP8 (ENSCWAG00000001454) ISL1 (ENSCWAG00000001402) PELO (ENSCWAG00000001384) ITGA1 (ENSCWAG00000001336) ITGA2 (ENSCWAG00000001260) MOCS2 (ENSCWAG00000001218) FST (ENSCWAG00000001191) ENSCWAG00000001173 ENSCWAG00000001155 ENSCWAG00000001138 ##22 ARL15 (ENSCWAG00000001125) HSPB3 (ENSCWAG00000001117) SNX18 (ENSCWAG00000001101) ENSCWAG00000001089 ESM1 (ENSCWAG00000001069) GZMK (ENSCWAG00000001047) ENSCWAG00000001020 GZMA (ENSCWAG00000001001) ENSCWAG00000000992 GPX8 (ENSCWAG00000000975) CDC20B (ENSCWAG00000000806) MCIDAS (ENSCWAG00000000761) CCNO (ENSCWAG00000000746) DHX29 (ENSCWAG00000000659) MTREX (ENSCWAG00000000555) Artiodactyla_a ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Cetacea ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Blue whale MODERN SPECIES 15 ENSBMSG00010014149 CADM2 (ENSBMSG00010013918) VGLL3 (ENSBMSG00010013835) CHMP2B (ENSBMSG00010013802) POU1F1 (ENSBMSG00010013769) HTR1F (ENSBMSG00010013753) CGGBP1 (ENSBMSG00010013748) ZNF654 (ENSBMSG00010013729) C3orf38 (ENSBMSG00010013712) ENSBMSG00010013699 EPHA3 (ENSBMSG00010013640) PROS1 (ENSBMSG00010013545) STX19 (ENSBMSG00010013516) ARL13B (ENSBMSG00010013489) NSUN3 (ENSBMSG00010013473) ENSBMSG00010013454 ##22 EPHA6 (ENSBMSG00010013383) ARL6 (ENSBMSG00010013360) CRYBG3 (ENSBMSG00010013311) RIOX2 (ENSBMSG00010013267) GABRR3 (ENSBMSG00010013229) OR5AC2 (ENSBMSG00010013206) ENSBMSG00010013178 ENSBMSG00010013162 ENSBMSG00010013151 ENSBMSG00010013142 ENSBMSG00010013130 ENSBMSG00010013098 GPR15 (ENSBMSG00010013083) CPOX (ENSBMSG00010013060) ST3GAL6 (ENSBMSG00010013016) Pecora ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Yarkand deer MODERN SPECIES 1305 ENSCHYG00000020913 ##22 Percora_a ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Siberian musk deer MODERN SPECIES 498 ENSMMSG00000005218 ##22 Bovidae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Caprinae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b ##22 Rambouillet Sheep MODERN SPECIES GPBP1L1 (ENSOARG00020000433) CCDC17 (ENSOARG00020000364) ENSOARG00020000265 AKR1A1 (ENSOARG00020000189) PRDX1 (ENSOARG00020000156) MMACHC (ENSOARG00020000138) ENSOARG00020000128 TESK2 (ENSOARG00020000085) TOE1 (ENSOARG00020000052) MUTYH (ENSOARG00020000051) HPDL (ENSOARG00020000043) ENSOARG00020000037 ZSWIM5 (ENSOARG00020003848) HECTD3 (ENSOARG00020003787) UROD (ENSOARG00020003627) ENSOARG00020003567 ##22 EIF2B3 (ENSOARG00020003516) PTCH2 (ENSOARG00020003214) BTBD19 (ENSOARG00020003142) DYNLT4 (ENSOARG00020003125) PLK3 (ENSOARG00020003053) BEST4 (ENSOARG00020003023) KIF2C (ENSOARG00020002926) RPS8 (ENSOARG00020002902) ARMH1 (ENSOARG00020002881) TMEM53 (ENSOARG00020002864) RNF220 (ENSOARG00020002839) ERI3 (ENSOARG00020002820) DMAP1 (ENSOARG00020002805) ENSOARG00020002795 KLF17 (ENSOARG00020002787) Bovinae DUPLICATION Bovinae DUPLICATION Bovinae ANCESTRAL SPECIES 27 ENSGT00940000163088 ENSGT00940000157114 ENSGT00940000158436 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00390000006114 ENSGT00510000048428 ENSGT00390000003924 ENSGT00940000158893 ENSGT00940000157126 ENSGT00960000189795 ENSGT00940000159519 ENSGT00940000158261 ENSGT00990000203615.b.b ENSGT01080000257365.b.a.b.a.b ENSGT01090000260040.b.b.b.b.a.b.e.a ##22 ENSGT00940000154313.d ENSGT00940000159663 ENSGT00940000156937 ENSGT00390000003710.d.c.b.a ENSGT00940000155900 ENSGT00390000002749 ENSGT00940000160304.e.b ENSGT00940000158679 ENSGT01010000222806 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000158740 ENSGT00530000063252.a.a ENSGT00940000155418.b ENSGT00940000153306.A.b Bos ANCESTRAL SPECIES 11 ENSGT00940000163088 ENSGT00940000157114 ENSGT00940000158436 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00390000006114 ENSGT00510000048428 ENSGT00390000003924 ENSGT00940000158893 ENSGT00940000157126 ENSGT00960000189795 ENSGT00940000159519 ENSGT00940000158261 ENSGT00990000203615.b.b ENSGT01080000257365.b.a.b.a.b ENSGT01090000260040.b.b.b.b.a.b.e.a ##22 ENSGT00940000154313.d ENSGT00940000159663 ENSGT00940000156937 ENSGT00390000003710.d.c.b.a ENSGT00940000155900 ENSGT00390000002749 ENSGT00940000160304.e.b ENSGT00940000158679 ENSGT01010000222806 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000158740 ENSGT00940000159609.h.a ENSGT00530000063252.a.a ENSGT00940000155418.b Bos_b ANCESTRAL SPECIES 10 ENSGT00940000163088 ENSGT00940000157114 ENSGT00940000158436 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00390000006114 ENSGT00510000048428 ENSGT00390000003924 ENSGT00940000158893 ENSGT00940000157126 ENSGT00960000189795 ENSGT00940000159519 ENSGT00940000158261 ENSGT00990000203615.b.b ENSGT01080000257365.b.a.b.a.b ENSGT01090000260040.b.b.b.b.a.b.e.a ##22 ENSGT00940000154313.d ENSGT00940000159663 ENSGT00940000156937 ENSGT00940000155900 ENSGT00390000002749 ENSGT00940000160304.e.b ENSGT00940000158679 ENSGT01010000222806 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000158740 ENSGT00940000159609.h.a ENSGT00530000063252.a.a ENSGT00940000155418.b ENSGT00940000153306.A.b Cow MODERN SPECIES 21 CDON (ENSBTAG00000009315) RPUSD4 (ENSBTAG00000020900) FAM118B (ENSBTAG00000012169) SRPRA (ENSBTAG00000014105) FOXRED1 (ENSBTAG00000014122) TIRAP (ENSBTAG00000021504) DCPS (ENSBTAG00000002879) ST3GAL4 (ENSBTAG00000016506) KIRREL3 (ENSBTAG00000006804) ENSBTAG00000050013 ENSBTAG00000052770 ETS1 (ENSBTAG00000002341) FLI1 (ENSBTAG00000008283) KCNJ1 (ENSBTAG00000000008) KCNJ5 (ENSBTAG00000006902) ENSBTAG00000024731 ##22 ARHGAP32 (ENSBTAG00000015905) BARX2 (ENSBTAG00000020643) ENSBTAG00000055310 JAM3 (ENSBTAG00000003176) IGSF9B (ENSBTAG00000014224) SPATA19 (ENSBTAG00000014651) OPCML (ENSBTAG00000020769) ENSBTAG00000033030 NTM (ENSBTAG00000010032) TMEM45B (ENSBTAG00000017602) NFRKB (ENSBTAG00000017610) PRDM10 (ENSBTAG00000019001) ENSBTAG00000016502 APLP2 (ENSBTAG00000016168) ENSBTAG00000050127 Hybrid Bos Indicus MODERN SPECIES 21 VSIG10L2 (ENSBIXG00005027178) CDON (ENSBIXG00005027248) RPUSD4 (ENSBIXG00005005612) FAM118B (ENSBIXG00005027365) SRPRA (ENSBIXG00005007778) FOXRED1 (ENSBIXG00005027555) TIRAP (ENSBIXG00005027602) ENSBIXG00005004780 KIRREL3 (ENSBIXG00005028061) ENSBIXG00005028111 ETS1 (ENSBIXG00005028250) ENSBIXG00005028285 FLI1 (ENSBIXG00005007790) KCNJ1 (ENSBIXG00005028469) KCNJ5 (ENSBIXG00005028495) ENSBIXG00005028504 ##22 ARHGAP32 (ENSBIXG00005002401) BARX2 (ENSBIXG00005002360) ENSBIXG00005028725 JAM3 (ENSBIXG00005028793) IGSF9B (ENSBIXG00005005050) SPATA19 (ENSBIXG00005028954) ENSBIXG00005005093 OPCML (ENSBIXG00005002077) NTM (ENSBIXG00005001973) ENSBIXG00005029103 TMEM45B (ENSBIXG00005008143) NFRKB (ENSBIXG00005008188) PRDM10 (ENSBIXG00005008246) ENSBIXG00005008278 ENSBIXG00005008284 Bos_a ANCESTRAL SPECIES 45 ENSGT00940000163088 ENSGT00940000157114 ENSGT00940000158436 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00390000006114 ENSGT00510000048428 ENSGT00390000003924 ENSGT00940000158893 ENSGT00940000157126 ENSGT00390000012351 ENSGT00940000159519 ENSGT00940000158261 ENSGT00990000203615.b.b ENSGT01080000257365.b.a.b.a.b ENSGT01090000260040.b.b.b.b.a.b.e.a ##22 ENSGT00940000154313.d ENSGT00940000159663 ENSGT00940000156937 ENSGT00390000003710.d.c.b.a ENSGT00940000155900 ENSGT00390000002749 ENSGT00940000160304.e.b ENSGT00940000158679 ENSGT00940000157181 ENSGT00390000016213 ENSGT00940000158740 ENSGT00940000159609.h.a ENSGT00530000063252.a.a ENSGT00940000155418.b ENSGT00940000153306.A.b Domestic yak MODERN SPECIES 21 VSIG10L2 (ENSBGRG00000019463) CDON (ENSBGRG00000019029) RPUSD4 (ENSBGRG00000018879) FAM118B (ENSBGRG00000018799) SRPRA (ENSBGRG00000018404) FOXRED1 (ENSBGRG00000018192) TIRAP (ENSBGRG00000018128) DCPS (ENSBGRG00000018077) ST3GAL4 (ENSBGRG00000017901) KIRREL3 (ENSBGRG00000017244) KATNBL1 (ENSBGRG00000024952) ETS1 (ENSBGRG00000024615) FLI1 (ENSBGRG00000024331) KCNJ1 (ENSBGRG00000024284) KCNJ5 (ENSBGRG00000024265) ENSBGRG00000024252 ##22 ENSBGRG00000024192 BARX2 (ENSBGRG00000024159) JAM3 (ENSBGRG00000024118) ENSBGRG00000024104 IGSF9B (ENSBGRG00000023743) SPATA19 (ENSBGRG00000023692) OPCML (ENSBGRG00000023514) NTM (ENSBGRG00000023281) TMEM45B (ENSBGRG00000023184) NFRKB (ENSBGRG00000022970) PRDM10 (ENSBGRG00000022866) ENSBGRG00000022843 ENSBGRG00000022831 APLP2 (ENSBGRG00000022006) ENSBGRG00000021958 American bison MODERN SPECIES 3123 ENSBBBG00000016342 ETS1 (ENSBBBG00000016330) FLI1 (ENSBBBG00000016217) KCNJ1 (ENSBBBG00000016162) KCNJ5 (ENSBBBG00000016151) ENSBBBG00000016139 ##22 ENSBBBG00000016128 BARX2 (ENSBBBG00000016109) JAM3 (ENSBBBG00000003999) ENSBBBG00000003995 IGSF9B (ENSBBBG00000016065) SPATA19 (ENSBBBG00000015962) ENSBBBG00000015940 ENSBBBG00000015905 NTM (ENSBBBG00000000776) ENSBBBG00000015871 TMEM45B (ENSBBBG00000015851) NFRKB (ENSBBBG00000002611) PRDM10 (ENSBBBG00000015742) APLP2 (ENSBBBG00000015615) ENSBBBG00000003848 Bovinae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.e.b ##22 American bison MODERN SPECIES 627 ENSBBBG00000008700 ##22 Bovinae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.f ##22 Bos ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.f ##22 Bos_a ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.a.b.f ##22 Wild yak MODERN SPECIES 872 ENSBMUG00000005395 ENSBMUG00000005393 ETS1 (ENSBMUG00000005346) FLI1 (ENSBMUG00000005250) KCNJ1 (ENSBMUG00000005157) KCNJ5 (ENSBMUG00000005143) ENSBMUG00000005128 ##22 ENSBMUG00000005108 BARX2 (ENSBMUG00000005092) Domestic yak MODERN SPECIES 69 ENSBGRG00000023421 ENSBGRG00000023464 CNGA2 (ENSBGRG00000023476) ENSBGRG00000023506 PRRG3 (ENSBGRG00000023519) ENSBGRG00000023537 ENSBGRG00000023594 GPR50 (ENSBGRG00000023639) ENSBGRG00000023671 CD99L2 (ENSBGRG00000023715) MTMR1 (ENSBGRG00000023860) MTM1 (ENSBGRG00000024246) ENSBGRG00000024396 ENSBGRG00000024428 ENSBGRG00000024444 ENSBGRG00000024460 ##22 ENSBGRG00000024481 ENSBGRG00000024491 VAMP7 (ENSBGRG00000024507) SPRY3 (ENSBGRG00000024611) TMLHE (ENSBGRG00000024645) CLIC2 (ENSBGRG00000024695) ENSBGRG00000024735 RAB39B (ENSBGRG00000024738) ENSBGRG00000024744 VBP1 (ENSBGRG00000024762) ENSBGRG00000024794 ENSBGRG00000024824 BRCC3 (ENSBGRG00000024843) MTCP1 (ENSBGRG00000024911) ENSBGRG00000024933 Eutheria ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Artiodactyla ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Suina ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Pig MODERN SPECIES 11 GREB1 (ENSSSCG00000025483) E2F6 (ENSSSCG00000026161) ROCK2 (ENSSSCG00000008629) SLC66A3 (ENSSSCG00000008631) #37 KCNF1 (ENSSSCG00000033463) #35 PDIA6 (ENSSSCG00000008633) #34 ATP6V1C2 (ENSSSCG00000008634) #33 NOL10 (ENSSSCG00000008635) #32 ODC1 (ENSSSCG00000027121) #30 HPCAL1 (ENSSSCG00000003663) #28 ENSSSCG00000031741 #16 CYS1 (ENSSSCG00000040267) #17 KLF11 (ENSSSCG00000038643) #18 GRHL1 (ENSSSCG00000026068) #19 TAF1B (ENSSSCG00000008637) #21 YWHAQ (ENSSSCG00000008638) ##22 ADAM17 (ENSSSCG00000008641) #23 IAH1 (ENSSSCG00000008640) #24 CPSF3 (ENSSSCG00000020799) #25 ITGB1BP1 (ENSSSCG00000029313) #26 ASAP2 (ENSSSCG00000008642) #27 MBOAT2 (ENSSSCG00000023539) #15 KIDINS220 (ENSSSCG00000008644) #14 ID2 (ENSSSCG00000008645) #12 RNF144A (ENSSSCG00000008646) #11 RSAD2 (ENSSSCG00000008648) #10 CMPK2 (ENSSSCG00000008647) #9 ENSSSCG00000047407 SOX11 (ENSSSCG00000008649) #8 DCDC2C (ENSSSCG00000008651) COLEC11 (ENSSSCG00000025629) Artiodactyla_a ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Cetacea ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Odontoceti ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Odontoceti_a ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Odontoceti_b ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Monodontidae ANCESTRAL SPECIES 29 ENSGT00940000158604 ENSGT00390000006555 ENSGT00390000006009.a.a.a ENSGT00940000159856 ENSGT00960000193237 ENSGT00940000154322.A ENSGT00940000156843 ENSGT00980000198588 ENSGT00940000157428 ENSGT00940000156555.d ENSGT00390000002226 ENSGT00390000007512 ENSGT00940000160240.e.a ENSGT00390000004049.q.a ENSGT00940000163180 ENSGT01090000260040.b.b.b.b.b ##22 Beluga whale MODERN SPECIES 40 TRIM25 (ENSDLEG00000006532) DGKE (ENSDLEG00000006524) C17orf67 (ENSDLEG00000006521) NOG (ENSDLEG00000006518) ENSDLEG00000006513 ENSDLEG00000006507 TMEM100 (ENSDLEG00000006500) PCTP (ENSDLEG00000006492) MMD (ENSDLEG00000006480) HLF (ENSDLEG00000006466) STXBP4 (ENSDLEG00000006450) COX11 (ENSDLEG00000006431) TOM1L1 (ENSDLEG00000006392) ENSDLEG00000006953 ENSDLEG00000006951 ENSDLEG00000006944 ##22 Narwhal MODERN SPECIES 316 C17orf67 (ENSMMNG00015015494) NOG (ENSMMNG00015015489) ANKFN1 (ENSMMNG00015015459) ENSMMNG00015015440 TMEM100 (ENSMMNG00015015428) PCTP (ENSMMNG00015015420) SMIM36 (ENSMMNG00015015407) MMD (ENSMMNG00015015397) HLF (ENSMMNG00015015384) STXBP4 (ENSMMNG00015015340) COX11 (ENSMMNG00015015313) TOM1L1 (ENSMMNG00015015274) ENSMMNG00015015250 ENSMMNG00015015242 ENSMMNG00015015231 ENSMMNG00015015222 ##22 ENSMMNG00015015214 ENSMMNG00015015202 CA10 (ENSMMNG00015015181) ENSMMNG00015015136 ENSMMNG00015015094 Vaquita MODERN SPECIES 12 TRIM25 (ENSPSNG00000013582) DGKE (ENSPSNG00000013515) C17orf67 (ENSPSNG00000013457) NOG (ENSPSNG00000013424) ANKFN1 (ENSPSNG00000012781) ENSPSNG00000012632 PCTP (ENSPSNG00000012604) TMEM100 (ENSPSNG00000012566) SMIM36 (ENSPSNG00000012521) MMD (ENSPSNG00000012484) HLF (ENSPSNG00000012389) STXBP4 (ENSPSNG00000012300) ENSPSNG00000012227 ENSPSNG00000012124 GPS2 (ENSPSNG00000012090) ENSPSNG00000012037 ##22 ENSPSNG00000011980 CA10 (ENSPSNG00000011791) ENSPSNG00000011630 TMEM132E (ENSPSNG00000011353) ENSPSNG00000011280 ENSPSNG00000011250 ENSPSNG00000011220 ZNF830 (ENSPSNG00000011195) LIG3 (ENSPSNG00000011102) RFFL (ENSPSNG00000010922) RAD51D (ENSPSNG00000010752) FNDC8 (ENSPSNG00000010677) NLE1 (ENSPSNG00000010570) UNC45B (ENSPSNG00000010204) ENSPSNG00000010100 Pecora ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Percora_a ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Bovidae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Bovinae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Bos ANCESTRAL SPECIES 5 ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646.c #34 ENSGT00390000004263.b #33 ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.a.a.a.a.a.a ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.fb.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b ENSGT01090000260040.b.b.b.b.b ##22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.k #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00990000204082 ENSGT00950000182858.B.a.d ENSGT00950000182858.B.b.b ENSGT00950000182858.B.b.a.e ENSGT00940000155853 Bos_b ANCESTRAL SPECIES 16 ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646.c #34 ENSGT00390000004263.b #33 ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.a.a.a.a.a.a ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.fb.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01100000263481.n.a.a.a.a.a.a.a.a.a.a.a.b ENSGT01090000260040.b.b.b.b.b ##22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990.k #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00950000182858.B.a.d ENSGT00950000182858.B.b.b ENSGT00950000182858.B.b.a.e Cow MODERN SPECIES 2 ENSBTAG00000048065 SLC66A3 (ENSBTAG00000020297) #37 C11H2orf50 (ENSBTAG00000001903) #36 KCNF1 (ENSBTAG00000021283) #35 PDIA6 (ENSBTAG00000001928) #34 ATP6V1C2 (ENSBTAG00000001927) #33 NOL10 (ENSBTAG00000002716) #32 ODC1 (ENSBTAG00000004256) #30 HPCAL1 (ENSBTAG00000004259) #28 RRM2 (ENSBTAG00000008216) #16 CYS1 (ENSBTAG00000052669) #17 KLF11 (ENSBTAG00000046218) #18 GRHL1 (ENSBTAG00000007485) #19 TAF1B (ENSBTAG00000007543) #21 ENSBTAG00000048394 YWHAQ (ENSBTAG00000002108) ##22 ADAM17 (ENSBTAG00000001141) #23 IAH1 (ENSBTAG00000001140) #24 CPSF3 (ENSBTAG00000019735) #25 ITGB1BP1 (ENSBTAG00000013063) #26 ASAP2 (ENSBTAG00000002329) #27 MBOAT2 (ENSBTAG00000008160) #15 KIDINS220 (ENSBTAG00000007963) #14 ID2 (ENSBTAG00000021187) #12 ENSBTAG00000037793 RNF144A (ENSBTAG00000044064) #11 RSAD2 (ENSBTAG00000016061) #10 CMPK2 (ENSBTAG00000019979) #9 ENSBTAG00000051441 SOX11 (ENSBTAG00000050114) #8 ENSBTAG00000039201 Caprinae DUPLICATION Caprinae ANCESTRAL SPECIES 6 ENSGT00940000160226 ENSGT00940000159837 ENSGT00390000017249 ENSGT00940000157667 ENSGT00940000158481 ENSGT00940000159662 ENSGT00940000156620 ENSGT00940000161101 ENSGT00940000162841 ENSGT00910000148817 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT01090000260040.b.b.b.b.b.a ##22 ENSGT00940000157405 ENSGT00390000013149 ENSGT00390000012559 ENSGT00390000008679 ENSGT00940000155426 ENSGT00530000063981.b ENSGT00390000006218 ENSGT00940000160574 ENSGT00440000034605 ENSGT00390000016768 ENSGT00940000154234.a ENSGT00940000155379 ENSGT00530000063822.a.a ENSGT00940000156046 ENSGT00390000001680 Goat DUPLICATION Goat MODERN SPECIES 6 CHST1 (ENSCHIG00000008696) SYT13 (ENSCHIG00000027048) PRDM11 (ENSCHIG00000003161) TP53I11 (ENSCHIG00000017884) TSPAN18 (ENSCHIG00000024681) CD82 (ENSCHIG00000015537) ALX4 (ENSCHIG00000010305) EXT2 (ENSCHIG00000026007) ACCS (ENSCHIG00000026253) ACCSL (ENSCHIG00000010057) ENSCHIG00000016194 ALKBH3 (ENSCHIG00000017579) HSD17B12 (ENSCHIG00000011795) TTC17 (ENSCHIG00000011579) API5 (ENSCHIG00000015343) ENSCHIG00000008612 ##22 LRRC4C (ENSCHIG00000005885) ENSCHIG00000010847 RAG2 (ENSCHIG00000009200) RAG1 (ENSCHIG00000013265) TRAF6 (ENSCHIG00000015888) PRR5L (ENSCHIG00000001684) COMMD9 (ENSCHIG00000020550) LDLRAD3 (ENSCHIG00000023229) TRIM44 (ENSCHIG00000013533) FJX1 (ENSCHIG00000001972) PAMR1 (ENSCHIG00000018319) SLC1A2 (ENSCHIG00000026938) CD44 (ENSCHIG00000021491) PDHX (ENSCHIG00000013247) APIP (ENSCHIG00000025799) Goat MODERN SPECIES 21 HYLS1 (ENSCHIG00000024898) ENSCHIG00000014324 CDON (ENSCHIG00000006678) RPUSD4 (ENSCHIG00000009975) FAM118B (ENSCHIG00000016177) SRPRA (ENSCHIG00000012423) FOXRED1 (ENSCHIG00000017154) TIRAP (ENSCHIG00000025937) DCPS (ENSCHIG00000023271) ST3GAL4 (ENSCHIG00000012632) KIRREL3 (ENSCHIG00000003900) ETS1 (ENSCHIG00000015805) FLI1 (ENSCHIG00000015640) KCNJ1 (ENSCHIG00000016247) KCNJ5 (ENSCHIG00000012884) ENSCHIG00000021366 ##22 ARHGAP32 (ENSCHIG00000018341) BARX2 (ENSCHIG00000021956) JAM3 (ENSCHIG00000010160) IGSF9B (ENSCHIG00000020701) SPATA19 (ENSCHIG00000022538) ENSCHIG00000010903 OPCML (ENSCHIG00000014525) NTM (ENSCHIG00000012273) TMEM45B (ENSCHIG00000020404) NFRKB (ENSCHIG00000020816) PRDM10 (ENSCHIG00000026530) APLP2 (ENSCHIG00000011105) ST14 (ENSCHIG00000026619) ZBTB44 (ENSCHIG00000026404) ENSCHIG00000010113 Rambouillet Sheep MODERN SPECIES 6 SLC35C1 (ENSOARG00020020655) SYT13 (ENSOARG00020020545) PRDM11 (ENSOARG00020020437) TP53I11 (ENSOARG00020020367) TSPAN18 (ENSOARG00020020280) CD82 (ENSOARG00020020176) ALX4 (ENSOARG00020020142) EXT2 (ENSOARG00020019927) ACCS (ENSOARG00020019774) ENSOARG00020019654 ENSOARG00020019621 C11orf96 (ENSOARG00020019596) ALKBH3 (ENSOARG00020019554) ENSOARG00020019476 TTC17 (ENSOARG00020017912) ENSOARG00020017753 ##22 LRRC4C (ENSOARG00020017737) ENSOARG00020017700 ENSOARG00020017646 ENSOARG00020017606 RAG2 (ENSOARG00020017591) RAG1 (ENSOARG00020017552) TRAF6 (ENSOARG00020017492) PRR5L (ENSOARG00020017314) ENSOARG00020017291 COMMD9 (ENSOARG00020017119) LDLRAD3 (ENSOARG00020016954) TRIM44 (ENSOARG00020016896) FJX1 (ENSOARG00020016861) PAMR1 (ENSOARG00020016385) SLC1A2 (ENSOARG00020014083) Caprinae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b.b ##22 Goat MODERN SPECIES 22 OLFML2B (ENSCHIG00000027176) ENSCHIG00000014253 SPATA46 (ENSCHIG00000022724) SH2D1B (ENSCHIG00000012228) ENSCHIG00000018779 UHMK1 (ENSCHIG00000019078) UAP1 (ENSCHIG00000015675) DDR2 (ENSCHIG00000022077) HSD17B7 (ENSCHIG00000006708) CCDC190 (ENSCHIG00000016871) RGS4 (ENSCHIG00000025217) RGS5 (ENSCHIG00000022623) NUF2 (ENSCHIG00000021734) ENSCHIG00000010502 ENSCHIG00000027006 ENSCHIG00000000654 ##22 ENSCHIG00000024885 ENSCHIG00000019761 LMX1A (ENSCHIG00000022333) RXRG (ENSCHIG00000026695) LRRC52 (ENSCHIG00000022157) ENSCHIG00000010668 MGST3 (ENSCHIG00000011626) ENSCHIG00000021660 TMCO1 (ENSCHIG00000026421) UCK2 (ENSCHIG00000023693) FAM78B (ENSCHIG00000015653) ENSCHIG00000006658 POGK (ENSCHIG00000022352) TADA1 (ENSCHIG00000014712) ILDR2 (ENSCHIG00000014960) Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 182 NSG2 (ENSMMSG00000016007) ENSMMSG00000015984 FAM169A (ENSMMSG00000015906) ENSMMSG00000015871 GFM2 (ENSMMSG00000015843) ENSMMSG00000015830 ENC1 (ENSMMSG00000015823) ENSMMSG00000015814 ARHGEF28 (ENSMMSG00000015336) ENSMMSG00000015240 UTP15 (ENSMMSG00000015177) ENSMMSG00000015103 ENSMMSG00000015081 TMEM174 (ENSMMSG00000015062) TMEM171 (ENSMMSG00000015047) ENSMMSG00000015028 ##22 FCHO2 (ENSMMSG00000014984) TNPO1 (ENSMMSG00000014901) ENSMMSG00000014876 ZNF366 (ENSMMSG00000014861) PTCD2 (ENSMMSG00000014786) MRPS27 (ENSMMSG00000014750) MAP1B (ENSMMSG00000014729) ENSMMSG00000014717 CARTPT (ENSMMSG00000014699) MCCC2 (ENSMMSG00000014670) ENSMMSG00000014652 ENSMMSG00000014640 ENSMMSG00000023211 ENSMMSG00000023205 ENSMMSG00000023130 Siberian musk deer MODERN SPECIES 1197 SFMBT2 (ENSMMSG00000016534) ENSMMSG00000016502 ##22 ITIH5 (ENSMMSG00000016468) ITIH2 (ENSMMSG00000016253) KIN (ENSMMSG00000016115) ENSMMSG00000016056 TAF3 (ENSMMSG00000016016) GATA3 (ENSMMSG00000015981) ENSMMSG00000015955 Laurasiatheria_b ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Laurasiatheria_c ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Equus ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Horse MODERN SPECIES 6 ROCK2 (ENSECAG00000009872) ENSECAG00000053488 SLC66A3 (ENSECAG00000020784) #37 C15H2orf50 (ENSECAG00000022456) #36 KCNF1 (ENSECAG00000002935) #35 PDIA6 (ENSECAG00000022717) #34 ATP6V1C2 (ENSECAG00000010555) #33 NOL10 (ENSECAG00000015177) #32 ODC1 (ENSECAG00000022690) #30 HPCAL1 (ENSECAG00000040270) #28 RRM2 (ENSECAG00000007464) #16 CYS1 (ENSECAG00000039359) #17 KLF11 (ENSECAG00000015820) #18 GRHL1 (ENSECAG00000015969) #19 TAF1B (ENSECAG00000023244) #21 YWHAQ (ENSECAG00000004925) ##22 ENSECAG00000050309 ADAM17 (ENSECAG00000005760) #23 IAH1 (ENSECAG00000018250) #24 CPSF3 (ENSECAG00000019911) #25 ITGB1BP1 (ENSECAG00000024193) #26 ASAP2 (ENSECAG00000024278) #27 ENSECAG00000054846 MBOAT2 (ENSECAG00000015922) #15 KIDINS220 (ENSECAG00000019263) #14 ID2 (ENSECAG00000008738) #12 RNF144A (ENSECAG00000009610) #11 RSAD2 (ENSECAG00000010055) #10 CMPK2 (ENSECAG00000012773) #9 SOX11 (ENSECAG00000037831) #8 ENSECAG00000053393 Carnivora ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Felidae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Cat MODERN SPECIES 2 E2F6 (ENSFCAG00000011952) ROCK2 (ENSFCAG00000024216) SLC66A3 (ENSFCAG00000014335) #37 CA3H2orf50 (ENSFCAG00000044685) #36 KCNF1 (ENSFCAG00000031035) #35 PDIA6 (ENSFCAG00000009258) #34 ATP6V1C2 (ENSFCAG00000009257) #33 NOL10 (ENSFCAG00000009255) #32 ODC1 (ENSFCAG00000027500) #30 HPCAL1 (ENSFCAG00000009252) #28 RRM2 (ENSFCAG00000003942) #16 CYS1 (ENSFCAG00000045113) #17 KLF11 (ENSFCAG00000030965) #18 GRHL1 (ENSFCAG00000007856) #19 TAF1B (ENSFCAG00000007855) #21 YWHAQ (ENSFCAG00000007854) ##22 ADAM17 (ENSFCAG00000007853) #23 IAH1 (ENSFCAG00000023291) #24 CPSF3 (ENSFCAG00000007852) #25 ITGB1BP1 (ENSFCAG00000034320) #26 ASAP2 (ENSFCAG00000007850) #27 MBOAT2 (ENSFCAG00000027684) #15 KIDINS220 (ENSFCAG00000029422) #14 ID2 (ENSFCAG00000026937) #12 RNF144A (ENSFCAG00000000709) #11 RSAD2 (ENSFCAG00000035139) #10 CMPK2 (ENSFCAG00000022513) #9 SOX11 (ENSFCAG00000039092) #8 DCDC2C (ENSFCAG00000044946) ALLC (ENSFCAG00000007504) COLEC11 (ENSFCAG00000031800) Caniformia ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Canidae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Canis_lupus DUPLICATION Canis_lupus ANCESTRAL SPECIES 30 ENSGT00940000154340.A ENSGT00390000002219 ENSGT00940000154589.b ENSGT00940000159753 ENSGT00940000162895 ENSGT00940000162335 ENSGT00940000162642 ENSGT00940000154949.b ENSGT00940000155279.C ENSGT00940000155150.a ENSGT00940000159954 ENSGT00940000156545 ENSGT00950000183178.a.q.b.a.b.a.a ENSGT00940000157168 ENSGT00390000018086.z.j.b.a.b.b ENSGT01090000260040.b.b.b.b.b.e ##22 ENSGT01070000254361 ENSGT00940000172584.c.b.a.a ENSGT00510000046470.a.a.a.d.b ENSGT00940000160665 ENSGT00940000158131 ENSGT00940000154451.k.b.b ENSGT00550000075003 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a ENSGT00950000183027.b ENSGT00940000169764 ENSGT00940000156337 ENSGT00530000064570.q ENSGT00800000124172 ENSGT00940000155475 Dog MODERN SPECIES 25 AP1AR (ENSCAFG00845016400) TIFA (ENSCAFG00845016552) ALPK1 (ENSCAFG00845016654) ENSCAFG00845016756 NEUROG2 (ENSCAFG00845016784) ZGRF1 (ENSCAFG00845017018) LARP7 (ENSCAFG00845017248) ANK2 (ENSCAFG00845020611) CAMK2D (ENSCAFG00845028435) ARSJ (ENSCAFG00845028819) ENSCAFG00845028859 UGT8 (ENSCAFG00845028928) ENSCAFG00845029073 NDST4 (ENSCAFG00845029101) ENSCAFG00845029150 ENSCAFG00845029165 ##22 ENSCAFG00845029266 ENSCAFG00845029324 ENSCAFG00845029353 TRAM1L1 (ENSCAFG00845029459) NDST3 (ENSCAFG00845029512) PRSS12 (ENSCAFG00845029625) ENSCAFG00845029655 METTL14 (ENSCAFG00845029674) SEC24D (ENSCAFG00845029774) SYNPO2 (ENSCAFG00845029946) MYOZ2 (ENSCAFG00845030005) USP53 (ENSCAFG00845030047) ENSCAFG00845030125 FABP2 (ENSCAFG00845030144) PDE5A (ENSCAFG00845030199) Dingo MODERN SPECIES 308 NEUROG2 (ENSCAFG00020017205) ENSCAFG00020017208 ENSCAFG00020017220 LARP7 (ENSCAFG00020017225) ENSCAFG00020017243 ENSCAFG00020017278 ENSCAFG00020017332 ARSJ (ENSCAFG00020017341) ENSCAFG00020017345 ENSCAFG00020017349 UGT8 (ENSCAFG00020017350) ENSCAFG00020017353 NDST4 (ENSCAFG00020017358) ENSCAFG00020017368 ENSCAFG00020017373 ENSCAFG00020017378 ##22 ENSCAFG00020017382 ENSCAFG00020017392 TRAM1L1 (ENSCAFG00020017395) NDST3 (ENSCAFG00020017398) PRSS12 (ENSCAFG00020017432) ENSCAFG00020017446 METTL14 (ENSCAFG00020017450) SEC24D (ENSCAFG00020017464) ENSCAFG00020017478 SYNPO2 (ENSCAFG00020017481) MYOZ2 (ENSCAFG00020017484) ENSCAFG00020017490 USP53 (ENSCAFG00020017496) ENSCAFG00020017515 FABP2 (ENSCAFG00020017519) Canis_lupus ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b.f ##22 Dingo MODERN SPECIES 214 RAB39A (ENSCAFG00020008828) SLC35F2 (ENSCAFG00020008833) ELMOD1 (ENSCAFG00020008836) ENSCAFG00020008866 ALKBH8 (ENSCAFG00020008876) CWF19L2 (ENSCAFG00020008885) GUCY1A2 (ENSCAFG00020008933) ENSCAFG00020008979 AASDHPPT (ENSCAFG00020008990) KBTBD3 (ENSCAFG00020008995) MSANTD4 (ENSCAFG00020009005) GRIA4 (ENSCAFG00020009023) ENSCAFG00020009148 ENSCAFG00020009158 CASP12 (ENSCAFG00020009167) ENSCAFG00020009172 ##22 ENSCAFG00020009183 PDGFD (ENSCAFG00020009202) DDI1 (ENSCAFG00020009203) ENSCAFG00020009224 ENSCAFG00020009235 ENSCAFG00020009260 VDAC1 (ENSCAFG00020009285) ENSCAFG00020009289 MMP13 (ENSCAFG00020009304) MMP12 (ENSCAFG00020009354) MMP3 (ENSCAFG00020009376) MMP1 (ENSCAFG00020009380) MMP8 (ENSCAFG00020009478) MMP27 (ENSCAFG00020009747) MMP20 (ENSCAFG00020009756) Caniformia_b ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Ursidae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Giant Panda DUPLICATION Giant Panda MODERN SPECIES 1090 ENSAMEG00000027577 ##22 Giant Panda MODERN SPECIES 15 HR (ENSAMEG00000003382) NUDT18 (ENSAMEG00000003416) FHIP2B (ENSAMEG00000003424) DMTN (ENSAMEG00000003459) FGF17 (ENSAMEG00000003531) NPM2 (ENSAMEG00000003542) XPO7 (ENSAMEG00000003555) DOK2 (ENSAMEG00000003671) GFRA2 (ENSAMEG00000003691) LZTS1 (ENSAMEG00000012664) ATP6V1B2 (ENSAMEG00000012668) SLC18A1 (ENSAMEG00000012721) ENSAMEG00000000943 ENSAMEG00000005638 ENSAMEG00000031090 ENSAMEG00000026433 ##22 ENSAMEG00000000209 ENSAMEG00000000207 PTK2B (ENSAMEG00000000174) CHRNA2 (ENSAMEG00000000168) EPHX2 (ENSAMEG00000000158) ENSAMEG00000000147 CLU (ENSAMEG00000000141) SCARA3 (ENSAMEG00000000140) CCDC25 (ENSAMEG00000000139) ESCO2 (ENSAMEG00000000137) PBK (ENSAMEG00000000135) SCARA5 (ENSAMEG00000000133) NUGGC (ENSAMEG00000000131) ELP3 (ENSAMEG00000000124) PNOC (ENSAMEG00000003325) Giant Panda MODERN SPECIES 837 ENSAMEG00000025793 ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Tree shrew MODERN SPECIES 9362 ENSTBEG00000004724 ##22 Glires ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Rodentia ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Rodentia_B ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Myomorpha ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Muroidea ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Upper Galilee mountains blind mole rat MODERN SPECIES 1807 ENSNGAG00000000201 Cntn6 (ENSNGAG00000015729) ENSNGAG00000011995 ##22 Chl1 (ENSNGAG00000006637) Muroidea_A ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Cricetidae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Cricetidae_B ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 8 ENSPEMG00000025201 Tll1 (ENSPEMG00000012383) ENSPEMG00000024368 ENSPEMG00000031225 Spock3 (ENSPEMG00000014397) ENSPEMG00000030382 Anxa10 (ENSPEMG00000020433) Ddx60 (ENSPEMG00000023735) Palld (ENSPEMG00000023321) Cbr4 (ENSPEMG00000022822) Sh3rf1 (ENSPEMG00000015623) Nek1 (ENSPEMG00000012961) Clcn3 (ENSPEMG00000008384) Hpf1 (ENSPEMG00000016055) Mfap3l (ENSPEMG00000025834) ENSPEMG00000021022 ##22 Aadat (ENSPEMG00000018250) ENSPEMG00000030181 ENSPEMG00000013604 Galntl6 (ENSPEMG00000011290) Galnt7 (ENSPEMG00000003586) Hmgb2 (ENSPEMG00000013378) Sap30 (ENSPEMG00000029866) Scrg1 (ENSPEMG00000010744) ENSPEMG00000014184 Hand2 (ENSPEMG00000010233) ENSPEMG00000029214 Fbxo8 (ENSPEMG00000009379) Cep44 (ENSPEMG00000002959) Hpgd (ENSPEMG00000000284) Glra3 (ENSPEMG00000028664) Northern American deer mouse MODERN SPECIES 5 Tdp1 (ENSPEMG00000021415) ENSPEMG00000021294 Kcnk13 (ENSPEMG00000001940) Psmc1 (ENSPEMG00000009856) Nrde2 (ENSPEMG00000023707) Calm1 (ENSPEMG00000021298) Ttc7b (ENSPEMG00000021206) Rps6ka5 (ENSPEMG00000023079) Dglucy (ENSPEMG00000016463) Gpr68 (ENSPEMG00000030593) Ccdc88c (ENSPEMG00000030742) Ppp4r3a (ENSPEMG00000015313) ENSPEMG00000008098 ENSPEMG00000020943 ENSPEMG00000026162 ENSPEMG00000026478 ##22 ENSPEMG00000029806 Tc2n (ENSPEMG00000011804) Fbln5 (ENSPEMG00000018015) Trip11 (ENSPEMG00000010830) Atxn3 (ENSPEMG00000017729) Ndufb1 (ENSPEMG00000024757) Cpsf2 (ENSPEMG00000007917) Slc24a4 (ENSPEMG00000004559) Rin3 (ENSPEMG00000024982) Lgmn (ENSPEMG00000017356) Golga5 (ENSPEMG00000012325) Chga (ENSPEMG00000018135) Itpk1 (ENSPEMG00000009205) Moap1 (ENSPEMG00000016991) Tmem251 (ENSPEMG00000026973) Cricetinae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Chinese hamster chok1gshd MODERN SPECIES 2 Tmem37 (ENSCGRG00001002385) Sctr (ENSCGRG00001005944) Cfap221 (ENSCGRG00001022638) Tmem177 (ENSCGRG00001004033) Ptpn4 (ENSCGRG00001004410) Epb41l5 (ENSCGRG00001018059) Tmem185b (ENSCGRG00001005950) Ralb (ENSCGRG00001018860) Inhbb (ENSCGRG00001021419) Gli2 (ENSCGRG00001023112) ENSCGRG00001003252 Tfcp2l1 (ENSCGRG00001009789) Clasp1 (ENSCGRG00001010650) Nifk (ENSCGRG00001016466) TSN (ENSCGRG00001018233) ENSCGRG00001007738 ##22 ENSCGRG00001022226 ENSCGRG00001007230 ENSCGRG00001021112 Cdh20 (ENSCGRG00001022413) Rnf152 (ENSCGRG00001008692) Pign (ENSCGRG00001013700) Relch (ENSCGRG00001016605) Tnfrsf11a (ENSCGRG00001018680) Zcchc2 (ENSCGRG00001022059) Phlpp1 (ENSCGRG00001019420) BCL2 (ENSCGRG00001024362) Kdsr (ENSCGRG00001003536) ENSCGRG00001017700 Serpinb5 (ENSCGRG00001022199) Serpinb12 (ENSCGRG00001024353) Golden Hamster MODERN SPECIES 764 Polrmt (ENSMAUG00000019392) Hcn2 (ENSMAUG00000010521) Bsg (ENSMAUG00000010323) ENSMAUG00000020560 Tpgs1 (ENSMAUG00000001840) Madcam1 (ENSMAUG00000021497) Odf3l2 (ENSMAUG00000010358) Shc2 (ENSMAUG00000007720) C2cd4c (ENSMAUG00000015978) ENSMAUG00000013218 Theg (ENSMAUG00000005159) ENSMAUG00000008189 ENSMAUG00000005384 Plpp2 (ENSMAUG00000009359) ENSMAUG00000013541 ENSMAUG00000009575 ##22 ENSMAUG00000020592 ENSMAUG00000008319 2610008E11Rik (ENSMAUG00000007597) ENSMAUG00000011922 Or7a37 (ENSMAUG00000018329) Slc1a6 (ENSMAUG00000010823) Ccdc105 (ENSMAUG00000015800) Casp14 (ENSMAUG00000015211) Syde1 (ENSMAUG00000010021) Ilvbl (ENSMAUG00000015514) Notch3 (ENSMAUG00000021946) Ephx3 (ENSMAUG00000010068) Brd4 (ENSMAUG00000019036) Akap8 (ENSMAUG00000021975) Akap8l (ENSMAUG00000021519) Murinae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Rat MODERN SPECIES 19 Or9s27 (ENSRNOG00000066727) Or9s15 (ENSRNOG00000066764) Or9s27 (ENSRNOG00000062550) Or9s23 (ENSRNOG00000068571) Or9s23b (ENSRNOG00000070407) Or6b3 (ENSRNOG00000064010) Or6b2b (ENSRNOG00000070837) Or6b2 (ENSRNOG00000063133) Ndufa10 (ENSRNOG00000016470) AABR07068327.1 (ENSRNOG00000030045) ENSRNOG00000068729 Hdac4 (ENSRNOG00000020372) Twist2 (ENSRNOG00000020355) Asb1 (ENSRNOG00000020322) Traf3ip1 (ENSRNOG00000024468) AC141966.1 (ENSRNOG00000021435) ##22 Per2 (ENSRNOG00000020254) Hes6 (ENSRNOG00000020194) Ilkap (ENSRNOG00000020115) Erfe (ENSRNOG00000024688) Klhl30 (ENSRNOG00000020105) Espnl (ENSRNOG00000024717) Scly (ENSRNOG00000020083) Ube2f (ENSRNOG00000019953) Ramp1 (ENSRNOG00000019926) ENSRNOG00000066608 Rbm44 (ENSRNOG00000024878) Lrrfip1 (ENSRNOG00000019892) Rab17 (ENSRNOG00000052979) Prlh (ENSRNOG00000019871) Mlph (ENSRNOG00000019763) Mus ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Mus_A ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Mus_B ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Mus_C ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Steppe mouse MODERN SPECIES 3375 Alg10b (ENSMSIG00000022962) Syt10 (ENSMSIG00000022932) ENSMSIG00000022915 ##22 Rabl2 (ENSMSIG00000022891) Acr (ENSMSIG00000022877) Shank3 (ENSMSIG00000022725) Arsa (ENSMSIG00000022691) Mapk8ip2 (ENSMSIG00000022642) ENSMSIG00000022637 Chkb (ENSMSIG00000022596) Cpt1b (ENSMSIG00000022570) Syce3 (ENSMSIG00000022563) ENSMSIG00000022560 Odf3b (ENSMSIG00000022554) Tymp (ENSMSIG00000022545) Sco2 (ENSMSIG00000022541) Ncaph2 (ENSMSIG00000022410) Lmf2 (ENSMSIG00000022386) Rodentia_A ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Sciuridae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Eurasian red squirrel MODERN SPECIES 12 MAP2K3 (ENSSVLG00005005697) NATD1 (ENSSVLG00005005732) TMEM11 (ENSSVLG00005005759) DHRS7B (ENSSVLG00005005782) USP22 (ENSSVLG00005005846) TNFRSF13B (ENSSVLG00005005879) ENSSVLG00005005949 PLD6 (ENSSVLG00005005993) ENSSVLG00005006020 COPS3 (ENSSVLG00005006098) ENSSVLG00005006151 NT5M (ENSSVLG00005006183) MED9 (ENSSVLG00005006210) RASD1 (ENSSVLG00005006224) PEMT (ENSSVLG00005006253) ENSSVLG00005006290 ##22 RAI1 (ENSSVLG00005006326) SREBF1 (ENSSVLG00005006353) TOM1L2 (ENSSVLG00005006547) ENSSVLG00005006754 ENSSVLG00005006790 ENSSVLG00005006840 DRC3 (ENSSVLG00005006866) ATPAF2 (ENSSVLG00005007025) GID4 (ENSSVLG00005007090) DRG2 (ENSSVLG00005007141) ENSSVLG00005007191 ALKBH5 (ENSSVLG00005007411) LLGL1 (ENSSVLG00005007447) FLII (ENSSVLG00005007540) MIEF2 (ENSSVLG00005007902) Marmotini ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Marmotini_b ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Arctic ground squirrel MODERN SPECIES E2F6 (ENSUPAG00010011151) ENSUPAG00010011160 ROCK2 (ENSUPAG00010011170) SLC66A3 (ENSUPAG00010011204) #37 C2orf50 (ENSUPAG00010011218) #36 KCNF1 (ENSUPAG00010011227) #35 PDIA6 (ENSUPAG00010011237) #34 ATP6V1C2 (ENSUPAG00010011265) #33 NOL10 (ENSUPAG00010011386) #32 ODC1 (ENSUPAG00010011416) #30 HPCAL1 (ENSUPAG00010011428) #28 CYS1 (ENSUPAG00010011444) #17 KLF11 (ENSUPAG00010011457) #18 GRHL1 (ENSUPAG00010011483) #19 TAF1B (ENSUPAG00010011508) #21 YWHAQ (ENSUPAG00010011534) ##22 ADAM17 (ENSUPAG00010011539) #23 ENSUPAG00010011577 #24 CPSF3 (ENSUPAG00010011610) #25 ITGB1BP1 (ENSUPAG00010011629) #26 ASAP2 (ENSUPAG00010011650) #27 MBOAT2 (ENSUPAG00010011957) #15 KIDINS220 (ENSUPAG00010012028) #14 ID2 (ENSUPAG00010012253) #12 RNF144A (ENSUPAG00010012263) #11 RSAD2 (ENSUPAG00010012305) #10 CMPK2 (ENSUPAG00010012310) #9 SOX11 (ENSUPAG00010012315) #8 Alpin marmot MODERN SPECIES 71 ENSMMMG00000024093 ENSMMMG00000024094 RAP1GAP2 (ENSMMMG00000024095) CLUH (ENSMMMG00000024096) PAFAH1B1 (ENSMMMG00000024097) METTL16 (ENSMMMG00000024098) MNT (ENSMMMG00000024100) SGSM2 (ENSMMMG00000024101) TSR1 (ENSMMMG00000024102) SRR (ENSMMMG00000024105) SMG6 (ENSMMMG00000024106) OVCA2 (ENSMMMG00000024111) DPH1 (ENSMMMG00000024112) RTN4RL1 (ENSMMMG00000024113) RPA1 (ENSMMMG00000024114) ENSMMMG00000024115 ##22 SMYD4 (ENSMMMG00000024116) SERPINF1 (ENSMMMG00000024117) SERPINF2 (ENSMMMG00000024119) WDR81 (ENSMMMG00000024120) PRPF8 (ENSMMMG00000024122) ENSMMMG00000024123 RILP (ENSMMMG00000024124) SCARF1 (ENSMMMG00000024125) SLC43A2 (ENSMMMG00000024126) PITPNA (ENSMMMG00000024127) INPP5K (ENSMMMG00000024128) MYO1C (ENSMMMG00000024129) CRK (ENSMMMG00000024130) ENSMMMG00000024131 ENSMMMG00000024132 Hystricomorpha ANCESTRAL SPECIES 64 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.v #16 ENSGT00390000016845 #17 ENSGT00390000013305.a.a.u.a ##16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.b ##22 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 Hystricomorpha_a ANCESTRAL SPECIES 70 ENSGT00390000008041.C ENSGT00940000155734.q ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.v #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.b ##22 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00940000157666 ENSGT00940000155671 ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000003466 ENSGT00390000014122.i.b.a.b ENSGT00940000159468 ENSGT00390000001793 Guinea pig MODERN SPECIES 22 NIP7 (ENSCPOG00000003712) COG8 (ENSCPOG00000003706) PDF (ENSCPOG00000003745) VPS4A (ENSCPOG00000003700) SNTB2 (ENSCPOG00000003697) UTP4 (ENSCPOG00000005982) DERPC (ENSCPOG00000022495) HAS3 (ENSCPOG00000005980) TANGO6 (ENSCPOG00000020066) CDH1 (ENSCPOG00000012100) ENSCPOG00000032847 CDH3 (ENSCPOG00000009166) ZFP90 (ENSCPOG00000032310) SMPD3 (ENSCPOG00000015388) PRMT7 (ENSCPOG00000015386) ENSCPOG00000009063 ##22 SLC7A6OS (ENSCPOG00000038508) SLC7A6 (ENSCPOG00000011297) PLA2G15 (ENSCPOG00000019979) ESRP2 (ENSCPOG00000003360) NFATC3 (ENSCPOG00000031124) DUS2 (ENSCPOG00000013747) DDX28 (ENSCPOG00000013746) DPEP3 (ENSCPOG00000005908) SLC12A4 (ENSCPOG00000011721) LCAT (ENSCPOG00000024823) PSMB10 (ENSCPOG00000021270) PSKH1 (ENSCPOG00000013930) NRN1L (ENSCPOG00000005356) EDC4 (ENSCPOG00000019484) NUTF2 (ENSCPOG00000037906) Hystricomorpha_b ANCESTRAL SPECIES 91 ENSGT00940000155734.q ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000170593 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a.u.a ##16 ENSGT00390000013305.a.a.v #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.b ##22 ENSGT01090000260040.b.b.b.b.a.a #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT00940000157666 ENSGT00940000155671 ENSGT00730000111137 ENSGT00390000002448 ENSGT00390000008195 ENSGT00390000003466 ENSGT00390000014122.i.b.a.b ENSGT00940000159468 ENSGT00390000001793 Long-tailed chinchilla MODERN SPECIES 194 E2F6 (ENSCLAG00000004863) ROCK2 (ENSCLAG00000009471) SLC66A3 (ENSCLAG00000008584) #37 ENSCLAG00000007661 KCNF1 (ENSCLAG00000017968) #35 PDIA6 (ENSCLAG00000006956) #34 ATP6V1C2 (ENSCLAG00000006612) #33 NOL10 (ENSCLAG00000002234) #32 ODC1 (ENSCLAG00000002140) #30 HPCAL1 (ENSCLAG00000002037) #28 ENSCLAG00000002025 RRM2 (ENSCLAG00000001926) #16 ENSCLAG00000004146 #18 GRHL1 (ENSCLAG00000004000) #19 TAF1B (ENSCLAG00000003776) #21 YWHAQ (ENSCLAG00000003576) ##22 ADAM17 (ENSCLAG00000003055) #23 IAH1 (ENSCLAG00000002879) #24 CPSF3 (ENSCLAG00000002727) #25 ITGB1BP1 (ENSCLAG00000002388) #26 ASAP2 (ENSCLAG00000001989) #27 PXDN (ENSCLAG00000001727) MYT1L (ENSCLAG00000001644) ENSCLAG00000001592 EIPR1 (ENSCLAG00000002535) TRAPPC12 (ENSCLAG00000002486) ADI1 (ENSCLAG00000002464) RNASEH1 (ENSCLAG00000002440) RPS7 (ENSCLAG00000002424) COLEC11 (ENSCLAG00000002289) ALLC (ENSCLAG00000002247) Degu MODERN SPECIES 380 ENSODEG00000000758 ##22 ENSODEG00000000897 ENSODEG00000000951 ENSODEG00000001053 ENSODEG00000001144 ENSODEG00000001222 ENSODEG00000001261 ENSODEG00000000221 ENSODEG00000000299 ENSODEG00000000326 ODAM (ENSODEG00000000386) ENSODEG00000018554 AMTN (ENSODEG00000000478) Primates ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Haplorrhini ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Simiiformes ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Platyrrhini ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 442 HOXA7 (ENSANAG00000033107) HOXA6 (ENSANAG00000021101) HOXA5 (ENSANAG00000034612) HOXA4 (ENSANAG00000036216) HOXA3 (ENSANAG00000021432) HOXA2 (ENSANAG00000025238) HOXA1 (ENSANAG00000037615) ENSANAG00000025984 SKAP2 (ENSANAG00000029886) SNX10 (ENSANAG00000021914) CBX3 (ENSANAG00000022611) ENSANAG00000033016 NFE2L3 (ENSANAG00000027774) NPVF (ENSANAG00000035252) C7orf31 (ENSANAG00000027077) ENSANAG00000033583 ##22 ENSANAG00000028593 ENSANAG00000033111 OSBPL3 (ENSANAG00000028296) ENSANAG00000021188 ENSANAG00000026482 GSDME (ENSANAG00000035451) PALS2 (ENSANAG00000022814) NPY (ENSANAG00000024297) STK31 (ENSANAG00000029927) FAM221A (ENSANAG00000025669) ENSANAG00000030837 CCDC126 (ENSANAG00000021445) ENSANAG00000029761 TRA2A (ENSANAG00000035184) ENSANAG00000022407 Mas night monkey MODERN SPECIES 1339 GREB1 (ENSANAG00000024688) E2F6 (ENSANAG00000036636) ROCK2 (ENSANAG00000028355) ENSANAG00000021692 #37 C2orf50 (ENSANAG00000036655) #36 KCNF1 (ENSANAG00000036777) #35 PDIA6 (ENSANAG00000012637) #34 ENSANAG00000027269 #33 NOL10 (ENSANAG00000024937) #32 ODC1 (ENSANAG00000036668) #30 HPCAL1 (ENSANAG00000033383) #28 ENSANAG00000025761 #16 KLF11 (ENSANAG00000028728) #18 GRHL1 (ENSANAG00000025191) #19 TAF1B (ENSANAG00000031526) #21 YWHAQ (ENSANAG00000026145) ##22 ADAM17 (ENSANAG00000037496) #23 ENSANAG00000022015 IAH1 (ENSANAG00000033141) #24 CPSF3 (ENSANAG00000031254) #25 ENSANAG00000034926 #26 ASAP2 (ENSANAG00000023907) #27 ENSANAG00000030828 MBOAT2 (ENSANAG00000037506) #15 KIDINS220 (ENSANAG00000038069) #14 ID2 (ENSANAG00000035588) #12 Cebidae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Marmoset MODERN SPECIES 5 GREB1 (ENSCJAG00000006946) E2F6 (ENSCJAG00000006910) ROCK2 (ENSCJAG00000006805) SLC66A3 (ENSCJAG00000044173) #37 C2orf50 (ENSCJAG00000079383) #36 KCNF1 (ENSCJAG00000022930) #35 PDIA6 (ENSCJAG00000006694) #34 ATP6V1C2 (ENSCJAG00000006660) #33 NOL10 (ENSCJAG00000006602) #32 ODC1 (ENSCJAG00000006576) #30 HPCAL1 (ENSCJAG00000041528) #28 ENSCJAG00000006533 #16 KLF11 (ENSCJAG00000046813) #18 GRHL1 (ENSCJAG00000006431) #19 TAF1B (ENSCJAG00000006420) #21 YWHAQ (ENSCJAG00000040849) ##22 ENSCJAG00000062528 ADAM17 (ENSCJAG00000006369) #23 IAH1 (ENSCJAG00000006360) #24 CPSF3 (ENSCJAG00000006276) #25 ENSCJAG00000006250 #26 ASAP2 (ENSCJAG00000006233) #27 MBOAT2 (ENSCJAG00000006207) #15 ENSCJAG00000053616 KIDINS220 (ENSCJAG00000006054) #14 ENSCJAG00000006037 #12 RNF144A (ENSCJAG00000010225) #11 RSAD2 (ENSCJAG00000010219) #10 CMPK2 (ENSCJAG00000085281) #9 SOX11 (ENSCJAG00000038240) #8 DCDC2C (ENSCJAG00000083758) Cebidae_a ANCESTRAL SPECIES 7 ENSGT00940000162440 ENSGT00940000161864 ENSGT00940000161013 ENSGT00940000161585 ENSGT00940000159894 ENSGT00940000158988.a.a ENSGT00940000159522 ENSGT00940000162533 ENSGT00940000157315 ENSGT00390000017856.a ENSGT00940000156007 ENSGT00940000153305.c.e.b ENSGT00940000154431.e.b ENSGT00950000182892.a.b.b ENSGT00390000003271 ENSGT01090000260040.b.b.b.b.b ##22 ENSGT00390000015236 ENSGT00390000009405.b.a ENSGT00940000155957 ENSGT00940000155880 ENSGT00940000158500 ENSGT00940000156475 ENSGT00390000007287 ENSGT00770000120611.B ENSGT00910000146860.b ENSGT00940000153470.a.a.a.b ENSGT00940000157167 ENSGT00940000153566.a.h ENSGT00940000154957.B ENSGT00390000015035 ENSGT00950000183188.B Bolivian squirrel monkey MODERN SPECIES 112 HOXA6 (ENSSBOG00000026859) HOXA5 (ENSSBOG00000027127) ENSSBOG00000026625 HOXA3 (ENSSBOG00000031444) HOXA2 (ENSSBOG00000024057) HOXA1 (ENSSBOG00000022017) ENSSBOG00000035175 SKAP2 (ENSSBOG00000022367) SNX10 (ENSSBOG00000026009) ENSSBOG00000029159 HNRNPA2B1 (ENSSBOG00000005245) NFE2L3 (ENSSBOG00000028975) ENSSBOG00000028454 ENSSBOG00000027366 NPVF (ENSSBOG00000020608) ENSSBOG00000027136 ##22 C7orf31 (ENSSBOG00000030318) OSBPL3 (ENSSBOG00000031298) GSDME (ENSSBOG00000023554) PALS2 (ENSSBOG00000020815) NPY (ENSSBOG00000023880) ENSSBOG00000006781 STK31 (ENSSBOG00000033536) FAM221A (ENSSBOG00000021284) ENSSBOG00000032133 CCDC126 (ENSSBOG00000018628) TRA2A (ENSSBOG00000031562) ENSSBOG00000036184 IGF2BP3 (ENSSBOG00000019579) MALSU1 (ENSSBOG00000018985) GPNMB (ENSSBOG00000021795) Capuchin DUPLICATION Capuchin MODERN SPECIES 45 HOXA9 (ENSCCAG00000029541) HOXA7 (ENSCCAG00000024332) HOXA6 (ENSCCAG00000010092) HOXA5 (ENSCCAG00000029402) HOXA4 (ENSCCAG00000027072) HOXA3 (ENSCCAG00000023332) HOXA2 (ENSCCAG00000027236) HOXA1 (ENSCCAG00000023769) SKAP2 (ENSCCAG00000034754) SNX10 (ENSCCAG00000029733) CBX3 (ENSCCAG00000027804) HNRNPA2B1 (ENSCCAG00000029074) NFE2L3 (ENSCCAG00000031243) ENSCCAG00000022491 NPVF (ENSCCAG00000030493) ENSCCAG00000020933 ##22 C7orf31 (ENSCCAG00000003818) ENSCCAG00000026670 OSBPL3 (ENSCCAG00000037568) GSDME (ENSCCAG00000026650) PALS2 (ENSCCAG00000037294) NPY (ENSCCAG00000031249) STK31 (ENSCCAG00000027635) FAM221A (ENSCCAG00000037127) ENSCCAG00000026868 CCDC126 (ENSCCAG00000034455) ENSCCAG00000023919 TRA2A (ENSCCAG00000019576) ENSCCAG00000035874 IGF2BP3 (ENSCCAG00000027687) MALSU1 (ENSCCAG00000036592) Capuchin MODERN SPECIES 343 ENSCCAG00000019727 ARMCX1 (ENSCCAG00000031971) ARMCX4 (ENSCCAG00000008121) ENSCCAG00000023552 GLA (ENSCCAG00000034547) RPL36A (ENSCCAG00000018021) BTK (ENSCCAG00000011872) TIMM8A (ENSCCAG00000037399) TAF7L (ENSCCAG00000036511) DRP2 (ENSCCAG00000029586) ENSCCAG00000022060 ##22 CENPI (ENSCCAG00000025620) TMEM35A (ENSCCAG00000033390) ENSCCAG00000027748 TRMT2B (ENSCCAG00000024003) ARL13A (ENSCCAG00000028464) XKRX (ENSCCAG00000029081) NOX1 (ENSCCAG00000032816) CSTF2 (ENSCCAG00000032975) ENSCCAG00000022516 SYTL4 (ENSCCAG00000023571) SRPX2 (ENSCCAG00000036716) TSPAN6 (ENSCCAG00000017293) TNMD (ENSCCAG00000028821) PCDH19 (ENSCCAG00000021332) Catarrhini ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Macaca ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Macaca_a ANCESTRAL SPECIES 15 ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a.bb.a #30 ENSGT00940000154645.A #28 ENSGT00940000163505.b.b.b.b.b ENSGT00390000013305.a.a.w.a #16 ENSGT00390000016845 #17 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b.a.a.b #22 ENSGT01090000260040.b.b.b.b.b ##22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00910000148182 ENSGT00940000154030.a.b #9 ENSGT01100000263493.a.b.b.a.b.a.a.a.b.a.a ENSGT00940000170471.A.b.b.a.b.b ENSGT00940000162396 Crab-eating macaque MODERN SPECIES 4 E2F6 (ENSMFAG00000044687) ROCK2 (ENSMFAG00000043366) SLC66A3 (ENSMFAG00000034193) #37 C2orf50 (ENSMFAG00000032471) #36 KCNF1 (ENSMFAG00000041973) #35 PDIA6 (ENSMFAG00000037618) #34 ATP6V1C2 (ENSMFAG00000032936) #33 NOL10 (ENSMFAG00000041289) #32 ENSMFAG00000038147 #30 HPCAL1 (ENSMFAG00000044146) #28 RRM2 (ENSMFAG00000040783) #16 ENSMFAG00000052007 KLF11 (ENSMFAG00000039490) #18 GRHL1 (ENSMFAG00000032356) #19 TAF1B (ENSMFAG00000041401) #21 ENSMFAG00000004741 ##22 ADAM17 (ENSMFAG00000039177) #23 IAH1 (ENSMFAG00000039055) #24 CPSF3 (ENSMFAG00000001339) #25 ITGB1BP1 (ENSMFAG00000045554) #26 ASAP2 (ENSMFAG00000037845) #27 MBOAT2 (ENSMFAG00000003741) #15 KIDINS220 (ENSMFAG00000031830) #14 ID2 (ENSMFAG00000000039) #12 ENSMFAG00000057704 RNF144A (ENSMFAG00000040034) #11 RSAD2 (ENSMFAG00000055130) #10 ENSMFAG00000049943 ENSMFAG00000048573 ENSMFAG00000060203 ENSMFAG00000049271 Pig-tailed macaque MODERN SPECIES 443 SLC9A9 (ENSMNEG00000039490) CHST2 (ENSMNEG00000027882) U2SURP (ENSMNEG00000034553) PAQR9 (ENSMNEG00000001542) PCOLCE2 (ENSMNEG00000039023) TRPC1 (ENSMNEG00000030705) PLS1 (ENSMNEG00000015383) ATR (ENSMNEG00000006874) XRN1 (ENSMNEG00000034217) GK5 (ENSMNEG00000038743) ENSMNEG00000045190 TFDP2 (ENSMNEG00000039976) ATP1B3 (ENSMNEG00000035434) GRK7 (ENSMNEG00000032651) RNF7 (ENSMNEG00000027808) ENSMNEG00000039256 ##22 RASA2 (ENSMNEG00000034452) PXYLP1 (ENSMNEG00000041720) SPSB4 (ENSMNEG00000028739) ENSMNEG00000042747 SLC25A36 (ENSMNEG00000040083) TRIM42 (ENSMNEG00000045001) ENSMNEG00000022589 ENSMNEG00000010088 CLSTN2 (ENSMNEG00000038192) NMNAT3 (ENSMNEG00000034277) RBP1 (ENSMNEG00000042493) ENSMNEG00000039456 RBP2 (ENSMNEG00000040865) COPB2 (ENSMNEG00000039119) MRPS22 (ENSMNEG00000034447) Atlantogenata ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Xenarthra ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Armadillo MODERN SPECIES 1960 ENSDNOG00000036942 FAM135B (ENSDNOG00000009538) ENSDNOG00000047842 ENSDNOG00000047946 ##22 Afrotheria ANCESTRAL SPECIES ENSGT01090000260040.b.b.b.b.b ##22 Tenrec DUPLICATION Tenrec MODERN SPECIES 4532 ENSETEG00000015362 YWHAQ (ENSETEG00000015359) ##22 Tenrec MODERN SPECIES 11624 ENSETEG00000000647 ##22 Marsupialia ANCESTRAL SPECIES 15 ENSGT00390000005410 ENSGT01090000260024.A.a.b.a.b.a.a.a.b.b ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.b ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.a.a ENSGT01090000260045.C.e.a.a.a.b.b.b.a ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b.n #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Marsupialia_b ANCESTRAL SPECIES 9 ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.b ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.a.a ENSGT01090000260045.C.e.a.a.a.b.b.b.a ENSGT01090000259995.a.b.c.b ENSGT01090000259995.a.b.c.a ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b.n #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 ENSGT00390000014122.i.b.a.b Diprotodontia ANCESTRAL SPECIES 2 ENSGT00390000005410 ENSGT01090000260024.A.a.b.a.b.a.a.a.b.b ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.b ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.a.a ENSGT01090000260045.C.e.a.a.a.b.b.b.a ENSGT01090000259995.a.b.c.b ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b.n #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 ENSGT00390000014122.i.b.a.a Diprotodontia_a ANCESTRAL SPECIES 2 ENSGT00390000006293.y ENSGT01090000260024.A.a.b.a.b.a.a.a.b.b ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.b ENSGT01090000260024.A.a.b.a.b.a.a.a.b.a.a.a ENSGT01090000260045.C.e.a.a.a.b.b.b.a ENSGT01090000259995.a.b.c.b ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b.n #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 ENSGT00390000014122.i.b.a.a koala MODERN SPECIES 47 ENSPCIG00000022636 ENSPCIG00000022638 ENSPCIG00000022654 ENSPCIG00000031028 ENSPCIG00000037026 KCNF1 (ENSPCIG00000022717) #35 PDIA6 (ENSPCIG00000022719) #34 ENSPCIG00000022723 #33 NOL10 (ENSPCIG00000022730) #32 ODC1 (ENSPCIG00000028406) #30 HPCAL1 (ENSPCIG00000028410) #28 RRM2 (ENSPCIG00000009801) #16 KLF11 (ENSPCIG00000009805) #18 ENSPCIG00000009814 GRHL1 (ENSPCIG00000009811) #19 YWHAQ (ENSPCIG00000022985) #22 ADAM17 (ENSPCIG00000009820) #23 IAH1 (ENSPCIG00000009821) #24 CPSF3 (ENSPCIG00000009823) #25 ITGB1BP1 (ENSPCIG00000031637) #26 ASAP2 (ENSPCIG00000014642) #27 MBOAT2 (ENSPCIG00000014636) #15 KIDINS220 (ENSPCIG00000014624) #14 ID2 (ENSPCIG00000014613) #12 ENSPCIG00000014608 ENSPCIG00000014602 RNF144A (ENSPCIG00000009611) #11 RSAD2 (ENSPCIG00000014960) #10 CMPK2 (ENSPCIG00000014961) #9 ENSPCIG00000001705 SOX11 (ENSPCIG00000033221) #8 Common wonbat MODERN SPECIES 574 ENSVURG00010016181 ENSVURG00010016175 ENSVURG00010016174 ENSVURG00010016160 ENSVURG00010016148 ENSVURG00010016144 KCNF1 (ENSVURG00010016135) #35 PDIA6 (ENSVURG00010016129) #34 ENSVURG00010016104 #33 NOL10 (ENSVURG00010016087) #32 ODC1 (ENSVURG00010016071) #30 HPCAL1 (ENSVURG00010016057) #28 RRM2 (ENSVURG00010016049) #16 KLF11 (ENSVURG00010016043) #18 GRHL1 (ENSVURG00010016002) #19 YWHAQ (ENSVURG00010015992) #22 ADAM17 (ENSVURG00010015976) #23 IAH1 (ENSVURG00010015962) #24 CPSF3 (ENSVURG00010015934) #25 Wallaby MODERN SPECIES 3986 ENSMEUG00000014442 #22 Tasmanian devil MODERN SPECIES 1 YIPF4 (ENSSHAG00000000345) SLC30A6 (ENSSHAG00000002690) SPAST (ENSSHAG00000006946) MEMO1 (ENSSHAG00000028323) SRD5A2 (ENSSHAG00000030408) ENSSHAG00000028280 ENSSHAG00000020888 XDH (ENSSHAG00000013713) EHD3 (ENSSHAG00000025583) CAPN14 (ENSSHAG00000012346) ENSSHAG00000009991 ENSSHAG00000026867 ENSSHAG00000005846 #18 GRHL1 (ENSSHAG00000002291) #19 TAF1B (ENSSHAG00000001155) #21 YWHAQ (ENSSHAG00000027258) #22 ADAM17 (ENSSHAG00000006354) #23 IAH1 (ENSSHAG00000006790) #24 CPSF3 (ENSSHAG00000007024) #25 ITGB1BP1 (ENSSHAG00000007675) #26 ASAP2 (ENSSHAG00000008132) #27 MBOAT2 (ENSSHAG00000012144) #15 KIDINS220 (ENSSHAG00000013088) #14 ID2 (ENSSHAG00000024722) #12 RNF144A (ENSSHAG00000007808) #11 RSAD2 (ENSSHAG00000028215) #10 CMPK2 (ENSSHAG00000020558) #9 ENSSHAG00000011050 ALLC (ENSSHAG00000012095) COLEC11 (ENSSHAG00000012488) RPS7 (ENSSHAG00000026004) Opossum DUPLICATION Opossum DUPLICATION Opossum MODERN SPECIES 7 ENSMODG00000000862 ENSMODG00000000847 ENSMODG00000000694 ENSMODG00000037470 ENSMODG00000025462 ENSMODG00000049774 ENSMODG00000025463 ENSMODG00000025465 ENSMODG00000029758 ENSMODG00000039644 ENSMODG00000041489 ENSMODG00000046226 ENSMODG00000042884 ENSMODG00000000810 ENSMODG00000000887 ENSMODG00000042807 #22 TRBV30 (ENSMODG00000000869) ENSMODG00000000845 ENSMODG00000000899 EPHB6 (ENSMODG00000000983) TRPV6 (ENSMODG00000001018) TRPV5 (ENSMODG00000001049) KEL (ENSMODG00000001067) ENSMODG00000024346 ENSMODG00000043337 ENSMODG00000041811 ENSMODG00000001073 ENSMODG00000024345 ENSMODG00000001147 ENSMODG00000024334 ENSMODG00000001181 Opossum MODERN SPECIES 4 PRDM11 (ENSMODG00000019874) TP53I11 (ENSMODG00000019873) TSPAN18 (ENSMODG00000019871) CD82 (ENSMODG00000040483) ALX4 (ENSMODG00000019869) EXT2 (ENSMODG00000019868) ENSMODG00000019867 ENSMODG00000019865 ENSMODG00000019866 C11orf96 (ENSMODG00000040262) ALKBH3 (ENSMODG00000019863) HSD17B12 (ENSMODG00000019862) TTC17 (ENSMODG00000019858) API5 (ENSMODG00000019854) ENSMODG00000050454 ENSMODG00000048963 #22 LRRC4C (ENSMODG00000024461) ENSMODG00000044338 ENSMODG00000024462 ENSMODG00000029605 ENSMODG00000027830 ENSMODG00000051556 ENSMODG00000046146 ENSMODG00000046213 ENSMODG00000019838 RAG2 (ENSMODG00000024469) RAG1 (ENSMODG00000024470) TRAF6 (ENSMODG00000019837) PRR5L (ENSMODG00000019835) COMMD9 (ENSMODG00000019834) LDLRAD3 (ENSMODG00000019832) Opossum MODERN SPECIES ENSMODG00000041844 ENSMODG00000042906 ENSMODG00000039931 KCNF1 (ENSMODG00000014817) #35 ENSMODG00000044983 PDIA6 (ENSMODG00000014811) #34 ENSMODG00000014803 #33 NOL10 (ENSMODG00000014784) #32 ENSMODG00000014779 #30 HPCAL1 (ENSMODG00000014770) #28 ENSMODG00000040102 ENSMODG00000014763 #16 KLF11 (ENSMODG00000014758) #18 GRHL1 (ENSMODG00000014753) #19 TAF1B (ENSMODG00000014747) #21 ENSMODG00000014740 #22 ADAM17 (ENSMODG00000014726) #23 IAH1 (ENSMODG00000045560) #24 CPSF3 (ENSMODG00000014703) #25 ENSMODG00000038673 ITGB1BP1 (ENSMODG00000014691) #26 ASAP2 (ENSMODG00000014685) #27 MBOAT2 (ENSMODG00000014667) #15 KIDINS220 (ENSMODG00000014660) #14 ENSMODG00000048947 ID2 (ENSMODG00000014618) #12 ENSMODG00000017695 RNF144A (ENSMODG00000014586) #11 RSAD2 (ENSMODG00000042627) #10 CMPK2 (ENSMODG00000014578) #9 SOX11 (ENSMODG00000036476) #8 Platypus MODERN SPECIES 84 FOXI1 (ENSOANG00000047041) ENSOANG00000007802 KCNMB1 (ENSOANG00000007801) KCNIP1 (ENSOANG00000007800) GABRP (ENSOANG00000007799) ENSOANG00000007798 RANBP17 (ENSOANG00000007795) TLX3 (ENSOANG00000044828) NPM1 (ENSOANG00000007792) FGF18 (ENSOANG00000037529) FBXW11 (ENSOANG00000007791) MRPS16 (ENSOANG00000042831) KLF11 (ENSOANG00000007790) #18 GRHL1 (ENSOANG00000007788) #19 ENSOANG00000007787 #21 YWHAQ (ENSOANG00000007786) #22 TCERG1 (ENSOANG00000006849) GPR151 (ENSOANG00000006850) PPP2R2B (ENSOANG00000021421) ENSOANG00000037332 ENSOANG00000021422 FBXO38 (ENSOANG00000009363) HTR4 (ENSOANG00000009365) SLC26A2 (ENSOANG00000037790) PDE6A (ENSOANG00000009367) PPARGC1B (ENSOANG00000009368) ARHGEF37 (ENSOANG00000039639) CSNK1A1 (ENSOANG00000002863) ENSOANG00000013479 PCYOX1L (ENSOANG00000013478) GRPEL2 (ENSOANG00000011040) Sauria ANCESTRAL SPECIES 1 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT01050000247847 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Archelosauria ANCESTRAL SPECIES 1 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT01050000247847 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Cryptodira ANCESTRAL SPECIES 1 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT01050000247847 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Testudinoidea ANCESTRAL SPECIES 12 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT01050000247847 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Testudinidae ANCESTRAL SPECIES 10 ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Abingdon island giant tortoise MODERN SPECIES 542 YWHAQ (ENSCABG00000008258) #22 ADAM17 (ENSCABG00000008257) #23 IAH1 (ENSCABG00000008256) #24 Goode s thornscrub tortoise MODERN SPECIES 17 GREB1 (ENSGEVG00005007324) E2F6 (ENSGEVG00005007439) ROCK2 (ENSGEVG00005007467) SLC66A3 (ENSGEVG00005007519) #37 C2orf50 (ENSGEVG00005007561) #36 KCNF1 (ENSGEVG00005007578) #35 PDIA6 (ENSGEVG00005007586) #34 ATP6V1C2 (ENSGEVG00005007637) #33 NOL10 (ENSGEVG00005007769) #32 ODC1 (ENSGEVG00005007862) #30 HPCAL1 (ENSGEVG00005007881) #28 RRM2 (ENSGEVG00005007899) #16 KLF11 (ENSGEVG00005007934) #18 GRHL1 (ENSGEVG00005008039) #19 TAF1B (ENSGEVG00005008345) #21 YWHAQ (ENSGEVG00005008366) #22 ADAM17 (ENSGEVG00005008380) #23 IAH1 (ENSGEVG00005008414) #24 CPSF3 (ENSGEVG00005008438) #25 ITGB1BP1 (ENSGEVG00005008492) #26 ASAP2 (ENSGEVG00005008532) #27 MBOAT2 (ENSGEVG00005008645) #15 KIDINS220 (ENSGEVG00005008688) #14 ID2 (ENSGEVG00005008728) #12 RNF144A (ENSGEVG00005008742) #11 RSAD2 (ENSGEVG00005008769) #10 CMPK2 (ENSGEVG00005008784) #9 ENSGEVG00005008806 SOX11 (ENSGEVG00005008815) #8 ENSGEVG00005008842 DCDC2C (ENSGEVG00005008873) Emydidae ANCESTRAL SPECIES 8 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT01050000247847 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 painted turtle MODERN SPECIES 2390 TRIB2 (ENSCPBG00000013994) LPIN1 (ENSCPBG00000014000) GREB1 (ENSCPBG00000014004) E2F6 (ENSCPBG00000014007) ROCK2 (ENSCPBG00000014009) SLC66A3 (ENSCPBG00000014025) #37 C2orf50 (ENSCPBG00000014027) #36 KCNF1 (ENSCPBG00000014030) #35 PDIA6 (ENSCPBG00000014031) #34 ATP6V1C2 (ENSCPBG00000014032) #33 RRM2 (ENSCPBG00000014047) #16 ENSCPBG00000014048 KLF11 (ENSCPBG00000014051) #18 GRHL1 (ENSCPBG00000014054) #19 TAF1B (ENSCPBG00000014058) #21 YWHAQ (ENSCPBG00000014061) #22 ADAM17 (ENSCPBG00000014063) #23 IAH1 (ENSCPBG00000014070) #24 CPSF3 (ENSCPBG00000014074) #25 ITGB1BP1 (ENSCPBG00000014075) #26 ASAP2 (ENSCPBG00000014081) #27 MBOAT2 (ENSCPBG00000014088) #15 KIDINS220 (ENSCPBG00000014107) #14 ID2 (ENSCPBG00000014130) #12 RNF144A (ENSCPBG00000014144) #11 RSAD2 (ENSCPBG00000014146) #10 CMPK2 (ENSCPBG00000014149) #9 SOX11 (ENSCPBG00000014153) #8 Three-toed box turtle MODERN SPECIES 15 GREB1 (ENSTMTG00000002344) E2F6 (ENSTMTG00000002335) ROCK2 (ENSTMTG00000002325) C2orf50 (ENSTMTG00000002318) #36 KCNF1 (ENSTMTG00000002317) #35 PDIA6 (ENSTMTG00000002306) #34 ATP6V1C2 (ENSTMTG00000002250) #33 NOL10 (ENSTMTG00000002231) #32 ODC1 (ENSTMTG00000002221) #30 HPCAL1 (ENSTMTG00000002212) #28 RRM2 (ENSTMTG00000002199) #16 KLF11 (ENSTMTG00000002194) #18 ENSTMTG00000002187 #19 ENSTMTG00000002182 #19 TAF1B (ENSTMTG00000002170) #21 YWHAQ (ENSTMTG00000002159) #22 ADAM17 (ENSTMTG00000002145) #23 IAH1 (ENSTMTG00000002139) #24 CPSF3 (ENSTMTG00000002118) #25 ITGB1BP1 (ENSTMTG00000002109) #26 ASAP2 (ENSTMTG00000001754) #27 MBOAT2 (ENSTMTG00000001696) #15 KIDINS220 (ENSTMTG00000001670) #14 ID2 (ENSTMTG00000001659) #12 RNF144A (ENSTMTG00000001652) #11 RSAD2 (ENSTMTG00000001639) #10 CMPK2 (ENSTMTG00000001631) #9 SOX11 (ENSTMTG00000001626) #8 ENSTMTG00000001613 DCDC2C (ENSTMTG00000001593) ALLC (ENSTMTG00000001582) Chinese turtle MODERN SPECIES 1137 RRM2 (ENSPSIG00000009363) #16 KLF11 (ENSPSIG00000010816) #18 GRHL1 (ENSPSIG00000010930) #19 TAF1B (ENSPSIG00000012081) #21 YWHAQ (ENSPSIG00000012692) #22 ADAM17 (ENSPSIG00000013693) #23 IAH1 (ENSPSIG00000015583) #24 CPSF3 (ENSPSIG00000016144) #25 ITGB1BP1 (ENSPSIG00000016662) #26 ASAP2 (ENSPSIG00000017299) #27 MBOAT2 (ENSPSIG00000017486) #15 KIDINS220 (ENSPSIG00000017562) #14 ID2 (ENSPSIG00000004438) #12 RNF144A (ENSPSIG00000004494) #11 Archosauria ANCESTRAL SPECIES 3 ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Australian saltwater crocodile MODERN SPECIES 38 ENSCPRG00005006100 ROCK2 (ENSCPRG00005006216) ENSCPRG00005006542 SLC66A3 (ENSCPRG00005006550) #37 C2orf50 (ENSCPRG00005006553) #36 KCNF1 (ENSCPRG00005006569) #35 PDIA6 (ENSCPRG00005006586) #34 ATP6V1C2 (ENSCPRG00005006593) #33 NOL10 (ENSCPRG00005006615) #32 ODC1 (ENSCPRG00005006625) #30 HPCAL1 (ENSCPRG00005006636) #28 RRM2 (ENSCPRG00005006653) #16 KLF11 (ENSCPRG00005006661) #18 GRHL1 (ENSCPRG00005006677) #19 TAF1B (ENSCPRG00005006808) #21 YWHAQ (ENSCPRG00005006856) #22 ENSCPRG00005006866 ##22 ADAM17 (ENSCPRG00005006916) #23 IAH1 (ENSCPRG00005007037) #24 CPSF3 (ENSCPRG00005007046) #25 ITGB1BP1 (ENSCPRG00005007062) #26 ASAP2 (ENSCPRG00005007065) #27 MBOAT2 (ENSCPRG00005007103) #15 KIDINS220 (ENSCPRG00005007277) #14 ID2 (ENSCPRG00005008324) #12 UBE2F (ENSCPRG00005008370) RNF144A (ENSCPRG00005008430) #11 RSAD2 (ENSCPRG00005008433) #10 CMPK2 (ENSCPRG00005008440) #9 SOX11 (ENSCPRG00005008466) #8 DCDC2C (ENSCPRG00005008489) Aves ANCESTRAL SPECIES 10 ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00990000204270 ENSGT00940000161652 #8 ENSGT00940000159468 ENSGT00390000014122 African ostrich MODERN SPECIES 790 ENSSCUG00000012072 RRM2 (ENSSCUG00000012069) #16 YWHAQ (ENSSCUG00000012068) #22 ADAM17 (ENSSCUG00000012064) #23 IAH1 (ENSSCUG00000012062) #24 CPSF3 (ENSSCUG00000012059) #25 ITGB1BP1 (ENSSCUG00000012054) #26 ASAP2 (ENSSCUG00000012052) #27 MBOAT2 (ENSSCUG00000012046) #15 KIDINS220 (ENSSCUG00000012039) #14 Neognathae ANCESTRAL SPECIES 2 ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00990000204270 ENSGT00940000161652 #8 ENSGT00940000159468 ENSGT00390000014122 Galloanserae ANCESTRAL SPECIES 2 ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000159468 ENSGT00390000014122 ENSGT00390000003466 Anatidae ANCESTRAL SPECIES ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT01000000216411 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699.h #25 ENSGT00390000003990 #26 ENSGT00940000155623.a #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000159468 ENSGT00390000014122 ENSGT00390000003466 Pink-footed goose MODERN SPECIES 48 E2F6 (ENSABRG00000000297) ROCK2 (ENSABRG00000000240) SLC66A3 (ENSABRG00000000216) #37 C2orf50 (ENSABRG00000010843) #36 ENSABRG00000010830 KCNF1 (ENSABRG00000010814) #35 PDIA6 (ENSABRG00000010799) #34 ATP6V1C2 (ENSABRG00000010781) #33 NOL10 (ENSABRG00000010777) #32 ODC1 (ENSABRG00000010758) #30 HPCAL1 (ENSABRG00000010754) #28 RRM2 (ENSABRG00000010731) #16 KLF11 (ENSABRG00000010724) #18 GRHL1 (ENSABRG00000010717) #19 TAF1B (ENSABRG00000010705) #21 YWHAQ (ENSABRG00000010695) #22 ADAM17 (ENSABRG00000010665) #23 IAH1 (ENSABRG00000010649) #24 CPSF3 (ENSABRG00000009595) #25 ITGB1BP1 (ENSABRG00000009505) #26 ASAP2 (ENSABRG00000009432) #27 MBOAT2 (ENSABRG00000009397) #15 KIDINS220 (ENSABRG00000009278) #14 ID2 (ENSABRG00000009225) #12 ENSABRG00000009198 ENSABRG00000009192 RNF144A (ENSABRG00000009186) #11 RSAD2 (ENSABRG00000009173) #10 CMPK2 (ENSABRG00000009165) #9 SOX11 (ENSABRG00000009128) #8 COLEC11 (ENSABRG00000009065) Duck MODERN SPECIES 21 E2F6 (ENSAPLG00000012476) ROCK2 (ENSAPLG00000011393) SLC66A3 (ENSAPLG00000030742) #37 C2orf50 (ENSAPLG00000011213) #36 ENSAPLG00000001506 ENSAPLG00000027989 PDIA6 (ENSAPLG00000010864) #34 ATP6V1C2 (ENSAPLG00000010549) #33 NOL10 (ENSAPLG00000009885) #32 ODC1 (ENSAPLG00000009531) #30 RRM2 (ENSAPLG00000009301) #16 ENSAPLG00000030281 KLF11 (ENSAPLG00000009146) #18 GRHL1 (ENSAPLG00000008667) #19 TAF1B (ENSAPLG00000008537) #21 YWHAQ (ENSAPLG00000023697) #22 ADAM17 (ENSAPLG00000007716) #23 IAH1 (ENSAPLG00000007422) #24 CPSF3 (ENSAPLG00000006941) #25 ITGB1BP1 (ENSAPLG00000006929) #26 ASAP2 (ENSAPLG00000006573) #27 MBOAT2 (ENSAPLG00000015705) #15 KIDINS220 (ENSAPLG00000015856) #14 ID2 (ENSAPLG00000020880) #12 RNF144A (ENSAPLG00000006187) #11 RSAD2 (ENSAPLG00000006016) #10 ENSAPLG00000022011 ENSAPLG00000017954 SOX11 (ENSAPLG00000025127) #8 COLEC11 (ENSAPLG00000025748) RPS7 (ENSAPLG00000002438) Phasianidae ANCESTRAL SPECIES 3 ENSGT00390000008041.C ENSGT00940000155734.ab ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000159468 ENSGT00390000014122 ENSGT00390000003466 Japanese quail MODERN SPECIES 21 E2F6 (ENSCJPG00005011055) ROCK2 (ENSCJPG00005011054) SLC66A3 (ENSCJPG00005011053) #37 C2orf50 (ENSCJPG00005011052) #36 KCNF1 (ENSCJPG00005011049) #35 PDIA6 (ENSCJPG00005011047) #34 ATP6V1C2 (ENSCJPG00005011046) #33 NOL10 (ENSCJPG00005011045) #32 ODC1 (ENSCJPG00005011044) #30 HPCAL1 (ENSCJPG00005011043) #28 RRM2 (ENSCJPG00005011038) #16 ENSCJPG00005011037 KLF11 (ENSCJPG00005011036) #18 GRHL1 (ENSCJPG00005011034) #19 TAF1B (ENSCJPG00005011032) #21 YWHAQ (ENSCJPG00005011031) #22 ADAM17 (ENSCJPG00005011030) #23 IAH1 (ENSCJPG00005011028) #24 CPSF3 (ENSCJPG00005011027) #25 ITGB1BP1 (ENSCJPG00005011017) #26 ASAP2 (ENSCJPG00005011015) #27 MBOAT2 (ENSCJPG00005011009) #15 KIDINS220 (ENSCJPG00005008683) #14 Id2 (ENSCJPG00005008665) #12 RNF144A (ENSCJPG00005008634) #11 RSAD2 (ENSCJPG00005008615) #10 CMPK2 (ENSCJPG00005008614) #9 SOX11 (ENSCJPG00005008603) #8 COLEC11 (ENSCJPG00005008571) RPS7 (ENSCJPG00005008570) RNASEH1 (ENSCJPG00005008569) Phasianidae_b ANCESTRAL SPECIES 2 ENSGT00390000008041.C ENSGT00940000155734.ab ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000159468 ENSGT00390000014122 ENSGT00390000003466 Chicken MODERN SPECIES 22 GREB1 (ENSGALG00010002758) E2F6 (ENSGALG00010002730) ROCK2 (ENSGALG00010002706) SLC66A3 (ENSGALG00010002673) #37 C2orf50 (ENSGALG00010002657) #36 KCNF1 (ENSGALG00010002644) #35 PDIA6 (ENSGALG00010002609) #34 ATP6V1C2 (ENSGALG00010002590) #33 NOL10 (ENSGALG00010003525) #32 ODC (ENSGALG00010003604) #30 HPCAL1 (ENSGALG00010002474) #28 RRM2 (ENSGALG00010002462) #16 KLF11 (ENSGALG00010002444) #18 GRHL1 (ENSGALG00010002433) #19 TAF1B (ENSGALG00010004230) #21 YWHAQ (ENSGALG00010003375) #22 ADAM17 (ENSGALG00010003348) #23 IAH1 (ENSGALG00010003295) #24 CPSF3 (ENSGALG00010003272) #25 ITGB1BP1 (ENSGALG00010003253) #26 ENSGALG00010003244 ASAP2 (ENSGALG00010003242) #27 MBOAT2 (ENSGALG00010003201) #15 KIDINS220 (ENSGALG00010003160) #14 ID2 (ENSGALG00010003117) #12 ENSGALG00010003853 RNF144A (ENSGALG00010003597) #11 RSAD2 (ENSGALG00010003583) #10 CMPK2 (ENSGALG00010002380) #9 SOX11 (ENSGALG00010003543) #8 COLEC11 (ENSGALG00010003478) Turkey MODERN SPECIES 11 ENSMGAG00000013974 ENSMGAG00000013975 ENSMGAG00000013977 ENSMGAG00000013979 RPS7 (ENSMGAG00000013978) ENSMGAG00000013980 ENSMGAG00000019338 #8 ENSMGAG00000013982 #9 ENSMGAG00000019604 #10 ENSMGAG00000013984 #11 ID2 (ENSMGAG00000013985) #12 ENSMGAG00000017593 ENSMGAG00000013993 #26 ENSMGAG00000013988 #27 CPSF3 (ENSMGAG00000013995) #25 ENSMGAG00000014004 #22 ENSMGAG00000014000 #23 ENSMGAG00000018898 ##22 TAF1B (ENSMGAG00000014006) #21 ENSMGAG00000014007 #19 ENSMGAG00000017891 #19 ENSMGAG00000014008 #18 ENSMGAG00000014009 #16 ENSMGAG00000014010 #28 ENSMGAG00000014011 #30 ENSMGAG00000020117 #32 ENSMGAG00000014012 #32 ENSMGAG00000014014 #34 ENSMGAG00000014013 #33 ENSMGAG00000015960 #35 ENSMGAG00000018364 #36 Neognathae_b ANCESTRAL SPECIES 1 ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00990000204270 ENSGT00940000161652 #8 ENSGT00940000159468 ENSGT00390000014122 Neognathae_c ANCESTRAL SPECIES 10 ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000159468 ENSGT00390000014122 ENSGT00390000003466 Golden eagle MODERN SPECIES 6 GREB1 (ENSACCG00020011499) E2F6 (ENSACCG00020011591) ROCK2 (ENSACCG00020011682) SLC66A3 (ENSACCG00020011809) #37 C2orf50 (ENSACCG00020011859) #36 KCNF1 (ENSACCG00020011878) #35 PDIA6 (ENSACCG00020011924) #34 ATP6V1C2 (ENSACCG00020012041) #33 NOL10 (ENSACCG00020012136) #32 ODC1 (ENSACCG00020012187) #30 HPCAL1 (ENSACCG00020012207) #28 RRM2 (ENSACCG00020012338) #16 KLF11 (ENSACCG00020012500) #18 ENSACCG00020012519 #19 TAF1B (ENSACCG00020012536) #21 YWHAQ (ENSACCG00020012565) #22 ADAM17 (ENSACCG00020012584) #23 IAH1 (ENSACCG00020012620) #24 CPSF3 (ENSACCG00020012650) #25 ITGB1BP1 (ENSACCG00020012708) #26 ASAP2 (ENSACCG00020013669) #27 MBOAT2 (ENSACCG00020014234) #15 KIDINS220 (ENSACCG00020014291) #14 ID2 (ENSACCG00020004736) #12 ENSACCG00020004746 RNF144A (ENSACCG00020004762) #11 RSAD2 (ENSACCG00020004774) #10 CMPK2 (ENSACCG00020004778) #9 SOX11 (ENSACCG00020004781) #8 COLEC11 (ENSACCG00020004791) RPS7 (ENSACCG00020004797) Kakapo MODERN SPECIES 23 ENSSHBG00005007333 ENSSHBG00005007299 SLC66A3 (ENSSHBG00005007268) #37 C2orf50 (ENSSHBG00005007249) #36 KCNF1 (ENSSHBG00005007231) #35 PDIA6 (ENSSHBG00005007211) #34 ATP6V1C2 (ENSSHBG00005007157) #33 NOL10 (ENSSHBG00005007121) #32 ODC1 (ENSSHBG00005007026) #30 HPCAL1 (ENSSHBG00005007002) #28 RRM2 (ENSSHBG00005006975) #16 KLF11 (ENSSHBG00005006947) #18 ENSSHBG00005006922 #19 ENSSHBG00005006892 #19 TAF1B (ENSSHBG00005006841) #21 YWHAQ (ENSSHBG00005006806) #22 ADAM17 (ENSSHBG00005006619) #23 IAH1 (ENSSHBG00005006527) #24 CPSF3 (ENSSHBG00005006481) #25 ITGB1BP1 (ENSSHBG00005006432) #26 ASAP2 (ENSSHBG00005006393) #27 MBOAT2 (ENSSHBG00005006345) #15 KIDINS220 (ENSSHBG00005006291) #14 ID2 (ENSSHBG00005006245) #12 RNF144A (ENSSHBG00005006232) #11 RSAD2 (ENSSHBG00005006118) #10 ENSSHBG00005006101 COLEC11 (ENSSHBG00005006078) RPS7 (ENSSHBG00005006046) RNASEH1 (ENSSHBG00005006018) ADI1 (ENSSHBG00005006001) Passeriformes ANCESTRAL SPECIES 2 ENSGT00940000157219 ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00990000204270 ENSGT00940000161652 #8 ENSGT00940000159468 ENSGT00390000014122 Great tit MODERN SPECIES 22 TRIB2 (ENSPMJG00000012455) LPIN1 (ENSPMJG00000012453) GREB1 (ENSPMJG00000012451) E2F6 (ENSPMJG00000012450) ROCK2 (ENSPMJG00000012447) SLC66A3 (ENSPMJG00000012442) #37 PDIA6 (ENSPMJG00000012436) #34 ATP6V1C2 (ENSPMJG00000012432) #33 NOL10 (ENSPMJG00000012429) #32 ODC1 (ENSPMJG00000012426) #30 HPCAL1 (ENSPMJG00000012424) #28 RRM2 (ENSPMJG00000012420) #16 KLF11 (ENSPMJG00000012416) #18 GRHL1 (ENSPMJG00000012412) #19 TAF1B (ENSPMJG00000012405) #21 YWHAQ (ENSPMJG00000012403) #22 ADAM17 (ENSPMJG00000012400) #23 IAH1 (ENSPMJG00000012394) #24 CPSF3 (ENSPMJG00000012393) #25 ITGB1BP1 (ENSPMJG00000012392) #26 ASAP2 (ENSPMJG00000010679) #27 MBOAT2 (ENSPMJG00000010666) #15 KIDINS220 (ENSPMJG00000010635) #14 ID2 (ENSPMJG00000010632) #12 RNF144A (ENSPMJG00000010564) #11 RSAD2 (ENSPMJG00000010563) #10 CMPK2 (ENSPMJG00000010562) #9 SOX11 (ENSPMJG00000010517) #8 COLEC11 (ENSPMJG00000010415) RPS7 (ENSPMJG00000010413) RNASEH1 (ENSPMJG00000010412) Passeriformes_d ANCESTRAL SPECIES 2 ENSGT00940000157219 ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612.p #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00990000204270 ENSGT00940000161652 #8 ENSGT00940000159468 ENSGT00390000014122 Flycatcher MODERN SPECIES 21 ENSFALG00000026316 ENSFALG00000027375 ROCK2 (ENSFALG00000006707) SLC66A3 (ENSFALG00000024817) #37 KCNF1 (ENSFALG00000014627) #35 PDIA6 (ENSFALG00000006683) #34 ATP6V1C2 (ENSFALG00000006666) #33 NOL10 (ENSFALG00000006658) #32 ODC1 (ENSFALG00000006656) #30 HPCAL1 (ENSFALG00000006653) #28 RRM2 (ENSFALG00000022902) #16 ENSFALG00000027922 KLF11 (ENSFALG00000006648) #18 GRHL1 (ENSFALG00000006639) #19 TAF1B (ENSFALG00000006636) #21 YWHAQ (ENSFALG00000023362) #22 ADAM17 (ENSFALG00000006611) #23 IAH1 (ENSFALG00000006579) #24 CPSF3 (ENSFALG00000006572) #25 ITGB1BP1 (ENSFALG00000026175) #26 ASAP2 (ENSFALG00000006556) #27 MBOAT2 (ENSFALG00000006544) #15 KIDINS220 (ENSFALG00000006522) #14 ID2 (ENSFALG00000006518) #12 RNF144A (ENSFALG00000027037) #11 RSAD2 (ENSFALG00000006483) #10 CMPK2 (ENSFALG00000023392) #9 ENSFALG00000025049 SOX11 (ENSFALG00000014554) #8 ENSFALG00000024355 COLEC11 (ENSFALG00000002076) Passeriformes_g ANCESTRAL SPECIES 1 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00990000205825 ENSGT00940000153916.B #37 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612.o #19 ENSGT00940000157612.p #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00990000204270 ENSGT00940000161652 #8 ENSGT00940000159468 ENSGT00390000014122 ENSGT00390000003466 Medium ground finch MODERN SPECIES 21 ENSGFOG00000007490 ROCK2 (ENSGFOG00000007498) ENSGFOG00000007525 SLC66A3 (ENSGFOG00000007534) #37 KCNF1 (ENSGFOG00000007549) #35 PDIA6 (ENSGFOG00000007553) #34 ATP6V1C2 (ENSGFOG00000007570) #33 NOL10 (ENSGFOG00000007627) #32 ODC1 (ENSGFOG00000007655) #30 HPCAL1 (ENSGFOG00000007664) #28 RRM2 (ENSGFOG00000007690) #16 KLF11 (ENSGFOG00000007951) #18 ENSGFOG00000007956 #19 ENSGFOG00000007959 #19 TAF1B (ENSGFOG00000007971) #21 YWHAQ (ENSGFOG00000007990) #22 ADAM17 (ENSGFOG00000008025) #23 IAH1 (ENSGFOG00000008321) #24 ENSGFOG00000008332 #25 ENSGFOG00000008345 #25 ITGB1BP1 (ENSGFOG00000008352) #26 ASAP2 (ENSGFOG00000008371) #27 MBOAT2 (ENSGFOG00000008417) #15 KIDINS220 (ENSGFOG00000008427) #14 ID2 (ENSGFOG00000008458) #12 RNF144A (ENSGFOG00000008461) #11 RSAD2 (ENSGFOG00000008473) #10 ENSGFOG00000008493 Passeroidea ANCESTRAL SPECIES ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00990000205825 ENSGT00940000153916.B #37 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612.o #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00990000204270 ENSGT00940000161652 #8 ENSGT00940000159468 ENSGT00390000014122 ENSGT00390000003466 Common canary MODERN SPECIES 1 TRIB2 (ENSSCAG00000012687) LPIN1 (ENSSCAG00000012667) GREB1 (ENSSCAG00000012639) E2F6 (ENSSCAG00000012631) ROCK2 (ENSSCAG00000012610) SLC66A3 (ENSSCAG00000012565) #37 KCNF1 (ENSSCAG00000012548) #35 PDIA6 (ENSSCAG00000012514) #34 ATP6V1C2 (ENSSCAG00000012422) #33 NOL10 (ENSSCAG00000012402) #32 ODC1 (ENSSCAG00000012395) #30 HPCAL1 (ENSSCAG00000012381) #28 RRM2 (ENSSCAG00000012371) #16 KLF11 (ENSSCAG00000012362) #18 GRHL1 (ENSSCAG00000012341) #19 YWHAQ (ENSSCAG00000012308) #22 ADAM17 (ENSSCAG00000012301) #23 IAH1 (ENSSCAG00000012295) #24 CPSF3 (ENSSCAG00000012290) #25 ITGB1BP1 (ENSSCAG00000012285) #26 ASAP2 (ENSSCAG00000012272) #27 MBOAT2 (ENSSCAG00000012256) #15 KIDINS220 (ENSSCAG00000012242) #14 ID2 (ENSSCAG00000012234) #12 RNF144A (ENSSCAG00000012205) #11 RSAD2 (ENSSCAG00000012190) #10 ENSSCAG00000012187 COLEC11 (ENSSCAG00000012167) RPS7 (ENSSCAG00000012160) RNASEH1 (ENSSCAG00000012122) ADI1 (ENSSCAG00000012116) Zebra finch MODERN SPECIES 23 LPIN1 (ENSTGUG00000013085) GREB1 (ENSTGUG00000013081) ENSTGUG00000013076 ROCK2 (ENSTGUG00000013067) ENSTGUG00000023758 SLC66A3 (ENSTGUG00000026462) #37 PDIA6 (ENSTGUG00000013056) #34 ATP6V1C2 (ENSTGUG00000013053) #33 NOL10 (ENSTGUG00000013047) #32 ODC1 (ENSTGUG00000013045) #30 HPCAL1 (ENSTGUG00000013044) #28 RRM2 (ENSTGUG00000013042) #16 KLF11 (ENSTGUG00000013041) #18 GRHL1 (ENSTGUG00000013038) #19 TAF1B (ENSTGUG00000013037) #21 YWHAQ (ENSTGUG00000013035) #22 ADAM17 (ENSTGUG00000013028) #23 IAH1 (ENSTGUG00000013025) #24 CPSF3 (ENSTGUG00000013016) #25 ITGB1BP1 (ENSTGUG00000013015) #26 ASAP2 (ENSTGUG00000013006) #27 MBOAT2 (ENSTGUG00000013004) #15 KIDINS220 (ENSTGUG00000012999) #14 ID2 (ENSTGUG00000012998) #12 RNF144A (ENSTGUG00000022180) #11 RSAD2 (ENSTGUG00000012992) #10 ENSTGUG00000022230 SOX11 (ENSTGUG00000012987) #8 COLEC11 (ENSTGUG00000022930) RPS7 (ENSTGUG00000012983) RNASEH1 (ENSTGUG00000012980) Lepidosauria ANCESTRAL SPECIES ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 tuatara MODERN SPECIES 1059 PDIA6 (ENSSPUG00000015876) #34 ENSSPUG00000015855 #33 NOL10 (ENSSPUG00000015811) #32 ODC1 (ENSSPUG00000015782) #30 HPCAL1 (ENSSPUG00000015772) #28 KLF11 (ENSSPUG00000015734) #18 GRHL1 (ENSSPUG00000015713) #19 TAF1B (ENSSPUG00000015685) #21 YWHAQ (ENSSPUG00000015663) #22 ADAM17 (ENSSPUG00000015632) #23 IAH1 (ENSSPUG00000015596) #24 CPSF3 (ENSSPUG00000015525) #25 ITGB1BP1 (ENSSPUG00000015506) #26 ASAP2 (ENSSPUG00000015478) #27 MBOAT2 (ENSSPUG00000015454) #15 KIDINS220 (ENSSPUG00000015402) #14 ID2 (ENSSPUG00000015382) #12 ENSSPUG00000015377 PTPRU (ENSSPUG00000015342) MECR (ENSSPUG00000015330) SRSF4 (ENSSPUG00000015318) ENSSPUG00000015261 Episquamata ANCESTRAL SPECIES ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Toxicofera ANCESTRAL SPECIES ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Elapidae ANCESTRAL SPECIES ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000011297 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827.c #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00940000159468 ENSGT00390000014122 Elapidae_a ANCESTRAL SPECIES 6 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000011297 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827.c #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00940000159468 ENSGT00390000014122 Acanthophiinae ANCESTRAL SPECIES 8 ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00390000011297 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827.c #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00940000159468 ENSGT00390000014122 Mainland tiger snake MODERN SPECIES 61 ENSNSUG00000020374 ROCK2 (ENSNSUG00000020375) ENSNSUG00000020405 C2orf50 (ENSNSUG00000020406) #36 KCNF1 (ENSNSUG00000020407) #35 PDIA6 (ENSNSUG00000020408) #34 ATP6V1C2 (ENSNSUG00000020409) #33 NOL10 (ENSNSUG00000020410) #32 ODC1 (ENSNSUG00000020411) #30 HPCAL1 (ENSNSUG00000020412) #28 RRM2 (ENSNSUG00000020414) #16 MTO1 (ENSNSUG00000020415) KLF11 (ENSNSUG00000020416) #18 GRHL1 (ENSNSUG00000020417) #19 TAF1B (ENSNSUG00000020418) #21 YWHAQ (ENSNSUG00000020419) #22 ADAM17 (ENSNSUG00000020420) #23 IAH1 (ENSNSUG00000020427) #24 CPSF3 (ENSNSUG00000020429) #25 ITGB1BP1 (ENSNSUG00000020455) #26 ASAP2 (ENSNSUG00000020456) #27 ENSNSUG00000020457 MBOAT2 (ENSNSUG00000020458) #15 KIDINS220 (ENSNSUG00000020459) #14 ID2 (ENSNSUG00000020460) #12 RNF144A (ENSNSUG00000020462) #11 RSAD2 (ENSNSUG00000020463) #10 CMPK2 (ENSNSUG00000020464) #9 SOX11 (ENSNSUG00000020465) #8 Eastern brown snake MODERN SPECIES 4 ROCK2 (ENSPTXG00000012863) SLC66A3 (ENSPTXG00000012846) #37 C2orf50 (ENSPTXG00000012845) #36 KCNF1 (ENSPTXG00000012843) #35 PDIA6 (ENSPTXG00000012842) #34 ATP6V1C2 (ENSPTXG00000012840) #33 NOL10 (ENSPTXG00000012838) #32 ODC1 (ENSPTXG00000012836) #30 HPCAL1 (ENSPTXG00000012834) #28 RRM2 (ENSPTXG00000012071) #16 MTO1 (ENSPTXG00000012060) KLF11 (ENSPTXG00000012059) #18 GRHL1 (ENSPTXG00000012057) #19 ENSPTXG00000012055 #21 ENSPTXG00000012054 #21 YWHAQ (ENSPTXG00000012051) #22 ADAM17 (ENSPTXG00000010969) #23 IAH1 (ENSPTXG00000010961) #24 CPSF3 (ENSPTXG00000010959) #25 ITGB1BP1 (ENSPTXG00000010957) #26 ASAP2 (ENSPTXG00000010952) #27 MBOAT2 (ENSPTXG00000010950) #15 KIDINS220 (ENSPTXG00000010945) #14 ID2 (ENSPTXG00000010944) #12 RNF144A (ENSPTXG00000010943) #11 RSAD2 (ENSPTXG00000010934) #10 CMPK2 (ENSPTXG00000010928) #9 SOX11 (ENSPTXG00000010926) #8 DCDC2C (ENSPTXG00000010924) COLEC11 (ENSPTXG00000010922) ENSPTXG00000010920 Blue-lipped sea krait MODERN SPECIES 7316 YWHAQ (ENSLLTG00000005662) #22 Indian cobra MODERN SPECIES C2orf50 (ENSNNAG00000012650) #36 KCNF1 (ENSNNAG00000012626) #35 PDIA6 (ENSNNAG00000012553) #34 ATP6V1C2 (ENSNNAG00000012518) #33 NOL10 (ENSNNAG00000012445) #32 ODC1 (ENSNNAG00000012411) #30 HPCAL1 (ENSNNAG00000012397) #28 RRM2 (ENSNNAG00000012363) #16 ENSNNAG00000012348 ENSNNAG00000012340 ENSNNAG00000012297 ENSNNAG00000012268 KLF11 (ENSNNAG00000012239) #18 GRHL1 (ENSNNAG00000012148) #19 TAF1B (ENSNNAG00000012041) #21 YWHAQ (ENSNNAG00000012018) #22 ADAM17 (ENSNNAG00000011958) #23 IAH1 (ENSNNAG00000011930) #24 CPSF3 (ENSNNAG00000011872) #25 ENSNNAG00000011863 ITGB1BP1 (ENSNNAG00000011812) #26 ASAP2 (ENSNNAG00000011592) #27 MBOAT2 (ENSNNAG00000011525) #15 KIDINS220 (ENSNNAG00000011277) #14 ENSNNAG00000011258 ID2 (ENSNNAG00000011245) #12 RNF144A (ENSNNAG00000011228) #11 RSAD2 (ENSNNAG00000011105) #10 CMPK2 (ENSNNAG00000011083) #9 SOX11 (ENSNNAG00000011078) #8 DCDC2C (ENSNNAG00000011041) Lizard MODERN SPECIES SLC66A3 (ENSACAG00000039706) #37 C2orf50 (ENSACAG00000000194) #36 PDIA6 (ENSACAG00000012985) #34 ATP6V1C2 (ENSACAG00000012893) #33 NOL10 (ENSACAG00000012738) #32 ODC1 (ENSACAG00000012600) #30 HPCAL1 (ENSACAG00000012561) #28 RRM2 (ENSACAG00000000112) #16 KLF11 (ENSACAG00000000128) #18 GRHL1 (ENSACAG00000000132) #19 ENSACAG00000040408 TAF1B (ENSACAG00000000152) #21 ENSACAG00000040523 ENSACAG00000040391 ENSACAG00000039990 YWHAQ (ENSACAG00000001306) #22 ADAM17 (ENSACAG00000001356) #23 IAH1 (ENSACAG00000001615) #24 ENSACAG00000021110 CPSF3 (ENSACAG00000001759) #25 ITGB1BP1 (ENSACAG00000001993) #26 ASAP2 (ENSACAG00000002004) #27 ENSACAG00000041154 MBOAT2 (ENSACAG00000002267) #15 ENSACAG00000037631 KIDINS220 (ENSACAG00000002386) #14 ID2 (ENSACAG00000042556) #12 ENSACAG00000040261 ENSACAG00000039383 RNF144A (ENSACAG00000007048) #11 RSAD2 (ENSACAG00000039042) #10 Laterata ANCESTRAL SPECIES 13 ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00940000162396 ENSGT00390000001793 ENSGT00940000159468 Argentine black and white tegu MODERN SPECIES 9 ZC3H13 (ENSSMRG00000005959) CPB2 (ENSSMRG00000005966) ROCK2 (ENSSMRG00000005998) SLC66A3 (ENSSMRG00000006003) #37 KCNF1 (ENSSMRG00000006005) #35 PDIA6 (ENSSMRG00000006032) #34 ATP6V1C2 (ENSSMRG00000006042) #33 NOL10 (ENSSMRG00000006057) #32 ODC1 (ENSSMRG00000006061) #30 HPCAL1 (ENSSMRG00000006133) #28 RRM2 (ENSSMRG00000006152) #16 KLF11 (ENSSMRG00000006180) #18 ENSSMRG00000006187 #19 ENSSMRG00000006208 #19 TAF1B (ENSSMRG00000006214) #21 YWHAQ (ENSSMRG00000006227) #22 ADAM17 (ENSSMRG00000006231) #23 IAH1 (ENSSMRG00000006268) #24 CPSF3 (ENSSMRG00000006269) #25 ITGB1BP1 (ENSSMRG00000006271) #26 ASAP2 (ENSSMRG00000006275) #27 MBOAT2 (ENSSMRG00000006296) #15 KIDINS220 (ENSSMRG00000006306) #14 ID2 (ENSSMRG00000006348) #12 ENSSMRG00000006368 RNF144A (ENSSMRG00000006394) #11 RSAD2 (ENSSMRG00000006397) #10 CMPK2 (ENSSMRG00000006467) #9 ENSSMRG00000006470 ENSSMRG00000006484 ENSSMRG00000006489 Common wall lizard DUPLICATION Common wall lizard DUPLICATION Common wall lizard DUPLICATION Common wall lizard DUPLICATION Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 128 ENSPMRG00000019526 #22 Common wall lizard MODERN SPECIES 4 AARSD1 (ENSPMRG00000011300) PTGES3L (ENSPMRG00000011317) RUNDC1 (ENSPMRG00000011321) RPL27 (ENSPMRG00000011326) IFI35 (ENSPMRG00000011331) ENSPMRG00000011337 RND2 (ENSPMRG00000011341) ENSPMRG00000011351 NBR1 (ENSPMRG00000011365) TMEM106A (ENSPMRG00000011369) ENSPMRG00000011372 ENSPMRG00000011375 #22 ENSPMRG00000011379 ENSPMRG00000011382 #22 ENSPMRG00000011386 #22 ENSPMRG00000011390 #22 ENSPMRG00000011393 PLEKHH3 (ENSPMRG00000011398) TUBG1 (ENSPMRG00000011407) RETREG3 (ENSPMRG00000011412) PSMC3IP (ENSPMRG00000011416) MLX (ENSPMRG00000011421) DHX8 (ENSPMRG00000011428) MRC2 (ENSPMRG00000011552) MARCHF10 (ENSPMRG00000012177) TANC2 (ENSPMRG00000012240) ENSPMRG00000012721 KCNH6 (ENSPMRG00000012739) DCAF7 (ENSPMRG00000012748) MAP3K3 (ENSPMRG00000012772) LIMD2 (ENSPMRG00000012857) Common wall lizard MODERN SPECIES 4 G6PC1 (ENSPMRG00000011283) ENSPMRG00000011289 AARSD1 (ENSPMRG00000011300) PTGES3L (ENSPMRG00000011317) RUNDC1 (ENSPMRG00000011321) RPL27 (ENSPMRG00000011326) IFI35 (ENSPMRG00000011331) ENSPMRG00000011337 RND2 (ENSPMRG00000011341) ENSPMRG00000011351 NBR1 (ENSPMRG00000011365) TMEM106A (ENSPMRG00000011369) ENSPMRG00000011372 ENSPMRG00000011375 #22 ENSPMRG00000011379 ENSPMRG00000011382 #22 ENSPMRG00000011386 #22 ENSPMRG00000011390 #22 ENSPMRG00000011393 PLEKHH3 (ENSPMRG00000011398) TUBG1 (ENSPMRG00000011407) RETREG3 (ENSPMRG00000011412) PSMC3IP (ENSPMRG00000011416) MLX (ENSPMRG00000011421) DHX8 (ENSPMRG00000011428) MRC2 (ENSPMRG00000011552) MARCHF10 (ENSPMRG00000012177) TANC2 (ENSPMRG00000012240) ENSPMRG00000012721 KCNH6 (ENSPMRG00000012739) DCAF7 (ENSPMRG00000012748) Common wall lizard MODERN SPECIES 4 ENSPMRG00000011274 ENSPMRG00000011278 G6PC1 (ENSPMRG00000011283) ENSPMRG00000011289 AARSD1 (ENSPMRG00000011300) PTGES3L (ENSPMRG00000011317) RUNDC1 (ENSPMRG00000011321) RPL27 (ENSPMRG00000011326) IFI35 (ENSPMRG00000011331) ENSPMRG00000011337 RND2 (ENSPMRG00000011341) ENSPMRG00000011351 NBR1 (ENSPMRG00000011365) TMEM106A (ENSPMRG00000011369) ENSPMRG00000011372 ENSPMRG00000011375 #22 ENSPMRG00000011379 ENSPMRG00000011382 #22 ENSPMRG00000011386 #22 ENSPMRG00000011390 #22 ENSPMRG00000011393 PLEKHH3 (ENSPMRG00000011398) TUBG1 (ENSPMRG00000011407) RETREG3 (ENSPMRG00000011412) PSMC3IP (ENSPMRG00000011416) MLX (ENSPMRG00000011421) DHX8 (ENSPMRG00000011428) MRC2 (ENSPMRG00000011552) MARCHF10 (ENSPMRG00000012177) TANC2 (ENSPMRG00000012240) ENSPMRG00000012721 Common wall lizard MODERN SPECIES 4 MAP3K3 (ENSPMRG00000012772) DCAF7 (ENSPMRG00000012748) KCNH6 (ENSPMRG00000012739) ENSPMRG00000012721 TANC2 (ENSPMRG00000012240) MARCHF10 (ENSPMRG00000012177) MRC2 (ENSPMRG00000011552) DHX8 (ENSPMRG00000011428) MLX (ENSPMRG00000011421) PSMC3IP (ENSPMRG00000011416) RETREG3 (ENSPMRG00000011412) TUBG1 (ENSPMRG00000011407) PLEKHH3 (ENSPMRG00000011398) ENSPMRG00000011393 ENSPMRG00000011390 #22 ENSPMRG00000011386 #22 ENSPMRG00000011382 #22 ENSPMRG00000011379 ENSPMRG00000011375 #22 ENSPMRG00000011372 TMEM106A (ENSPMRG00000011369) NBR1 (ENSPMRG00000011365) ENSPMRG00000011351 RND2 (ENSPMRG00000011341) ENSPMRG00000011337 IFI35 (ENSPMRG00000011331) RPL27 (ENSPMRG00000011326) RUNDC1 (ENSPMRG00000011321) PTGES3L (ENSPMRG00000011317) AARSD1 (ENSPMRG00000011300) ENSPMRG00000011289 Common wall lizard MODERN SPECIES 11 E2F6 (ENSPMRG00000002524) ROCK2 (ENSPMRG00000002407) SLC66A3 (ENSPMRG00000002376) #37 C2orf50 (ENSPMRG00000002369) #36 KCNF1 (ENSPMRG00000011788) #35 PDIA6 (ENSPMRG00000011782) #34 ATP6V1C2 (ENSPMRG00000011774) #33 ODC1 (ENSPMRG00000011766) #30 HPCAL1 (ENSPMRG00000011758) #28 NOL10 (ENSPMRG00000011740) #32 RRM2 (ENSPMRG00000011731) #16 KLF11 (ENSPMRG00000011727) #18 GRHL1 (ENSPMRG00000011712) #19 TAF1B (ENSPMRG00000011702) #21 ENSPMRG00000011699 ENSPMRG00000011696 #22 ADAM17 (ENSPMRG00000011682) #23 IAH1 (ENSPMRG00000011668) #24 CPSF3 (ENSPMRG00000011656) #25 ITGB1BP1 (ENSPMRG00000011647) #26 ASAP2 (ENSPMRG00000011623) #27 MBOAT2 (ENSPMRG00000011615) #15 KIDINS220 (ENSPMRG00000011602) #14 ID2 (ENSPMRG00000011594) #12 RNF144A (ENSPMRG00000011590) #11 RSAD2 (ENSPMRG00000011584) #10 CMPK2 (ENSPMRG00000011581) #9 SOX11 (ENSPMRG00000011579) #8 ENSPMRG00000011574 ENSPMRG00000011572 ENSPMRG00000011567 Anura ANCESTRAL SPECIES 32 ENSGT00390000008041.C ENSGT00940000155734 ENSGT01030000234517.D ENSGT00940000153916.B #37 ENSGT00940000154459.B #36 ENSGT00940000160213 #35 ENSGT00940000155646 #34 ENSGT00390000004263.b #33 ENSGT00390000007900 #32 ENSGT00950000182995.e.a.a.a #30 ENSGT00940000154645.A #28 ENSGT00390000013305.a.a #16 ENSGT00940000155982 #18 ENSGT00940000157612 #19 ENSGT00440000033827 #21 ENSGT01090000260040.b.b.b.b #22 ENSGT00940000155443 #23 ENSGT00390000008069 #24 ENSGT00940000155699 #25 ENSGT00390000003990 #26 ENSGT00940000155623 #27 ENSGT01030000234564.a.a.a.a.b #15 ENSGT00940000156714 #14 ENSGT00940000156464 #12 ENSGT00940000157701 #11 ENSGT00390000013670 #10 ENSGT00940000154030.a.b #9 ENSGT00940000161652 #8 ENSGT00390000001793 ENSGT00940000159468 ENSGT00390000014122 Leishan spiny toad MODERN SPECIES 7 ENSLLEG00000015392 ENSLLEG00000015410 ENSLLEG00000015438 ENSLLEG00000015508 ENSLLEG00000015548 ENSLLEG00000015564 ENSLLEG00000015595 COPS9 (ENSLLEG00000015618) RRM2 (ENSLLEG00000015723) #16 KLF11 (ENSLLEG00000016184) #18 GRHL1 (ENSLLEG00000016275) #19 TAF1B (ENSLLEG00000016913) #21 ENSLLEG00000017339 YWHAQ (ENSLLEG00000017369) #22 ADAM17 (ENSLLEG00000017494) #23 ENSLLEG00000018485 IAH1 (ENSLLEG00000018504) #24 CPSF3 (ENSLLEG00000018593) #25 ITGB1BP1 (ENSLLEG00000019225) #26 ENSLLEG00000019276 ASAP2 (ENSLLEG00000019352) #27 MBOAT2 (ENSLLEG00000021230) #15 KIDINS220 (ENSLLEG00000021372) #14 ENSLLEG00000021889 ENSLLEG00000021946 ID2 (ENSLLEG00000021970) #12 ENSLLEG00000022091 ENSLLEG00000022123 ENSLLEG00000022143 #9 Frog MODERN SPECIES 5 c2orf50 (ENSXETG00000023781) #36 ENSXETG00000041636 pgat (ENSXETG00000039468) KCNF1 (ENSXETG00000003508) #35 pdia6 (ENSXETG00000003512) #34 atp6v1c2 (ENSXETG00000003516) #33 nol10 (ENSXETG00000003518) #32 odc1 (ENSXETG00000003519) #30 hpcal1 (ENSXETG00000003521) #28 ENSXETG00000043226 rrm2.2 (ENSXETG00000036052) #16 MGC147302 (ENSXETG00000031276) klf11 (ENSXETG00000007013) #18 grhl1 (ENSXETG00000007012) #19 taf1b (ENSXETG00000007011) #21 ywhaq (ENSXETG00000007010) #22 adam17 (ENSXETG00000008262) #23 iah1 (ENSXETG00000026506) #24 cpsf3 (ENSXETG00000008263) #25 itgb1bp1 (ENSXETG00000008264) #26 asap2 (ENSXETG00000008265) #27 mboat2 (ENSXETG00000036035) #15 kidins220 (ENSXETG00000008271) #14 id2 (ENSXETG00000040416) #12 rnf144a (ENSXETG00000023433) #11 rsad2 (ENSXETG00000023435) #10 ENSXETG00000046085 cmpk2 (ENSXETG00000023437) #9 ENSXETG00000042607 sox11 (ENSXETG00000038964) #8 ENSXETG00000042475