Mus_A	ANCESTRAL SPECIES	9	ENSGT00390000003715 #8	ENSGT00940000156903 #9	ENSGT01030000234571.a.a #10	ENSGT00860000136157 #11	ENSGT00940000160283 #12	ENSGT01030000234621.B #13	ENSGT00950000182897.B.a.a #14	ENSGT01030000234621.A #15	ENSGT00940000155975 #16	ENSGT00940000161405 #17	ENSGT00940000163586.b.a.b.c.a #18	ENSGT00940000163586.b.b ##18	ENSGT00940000163586.b.a.a.a ##18	ENSGT00940000158290 #20	ENSGT01060000248592.E #21	ENSGT01060000248592.B #22	ENSGT01060000248592.D #23	ENSGT01060000248592.C #24	ENSGT01060000248589.B #25	ENSGT00440000037505.a #26	ENSGT00850000132319.a.a.a #27	ENSGT00940000162644	ENSGT00940000159812 #28	ENSGT00940000153655.A.b #29	ENSGT00390000011725.d #30	ENSGT00730000111053 #31	ENSGT00940000161729 #32	ENSGT00940000160465 #33	ENSGT00940000153664.B #34	ENSGT00940000154942.h #35	ENSGT00390000007965 #36
Mus_B	ANCESTRAL SPECIES	8	ENSGT00390000003715 #8	ENSGT00940000156903 #9	ENSGT01030000234571.a.a #10	ENSGT00860000136157 #11	ENSGT00940000160283 #12	ENSGT01030000234621.B #13	ENSGT00950000182897.B.a.a #14	ENSGT01030000234621.A #15	ENSGT00940000155975 #16	ENSGT00940000161405 #17	ENSGT00940000163586.b.a.b.c.a #18	ENSGT00940000163586.b.b ##18	ENSGT00940000163586.b.a.a.a ##18	ENSGT00940000158290 #20	ENSGT01060000248592.E #21	ENSGT01060000248592.B #22	ENSGT01060000248592.D #23	ENSGT01060000248592.C #24	ENSGT01060000248589.B #25	ENSGT00440000037505.a #26	ENSGT00850000132319.a.a.a #27	ENSGT00940000162644	ENSGT00940000159812 #28	ENSGT00940000153655.A.b #29	ENSGT00390000011725.d #30	ENSGT00730000111053 #31	ENSGT00940000161729 #32	ENSGT00940000160465 #33	ENSGT00940000153664.B #34	ENSGT00940000154942.h #35	ENSGT00390000007965 #36
Mus_C	ANCESTRAL SPECIES	6	ENSGT00940000156903 #9	ENSGT01030000234571.a.a #10	ENSGT00860000136157 #11	ENSGT00940000160283 #12	ENSGT01030000234621.B #13	ENSGT00950000182897.B.a.a #14	ENSGT01030000234621.A #15	ENSGT00940000155975 #16	ENSGT00940000161405 #17	ENSGT00940000163586.b.a.b.c.a #18	ENSGT00940000163586.b.b ##18	ENSGT00940000163586.b.a.a.b ##18	ENSGT00940000163586.a #19	ENSGT00940000158290 #20	ENSGT01060000248592.E #21	ENSGT01060000248592.B #22	ENSGT01060000248592.D #23	ENSGT01060000248592.C #24	ENSGT01060000248589.B #25	ENSGT00440000037505.a #26	ENSGT00850000132319.a.a.a #27	ENSGT00940000162644	ENSGT00940000159812 #28	ENSGT00940000153655.A.b #29	ENSGT00390000011725.d #30	ENSGT00730000111053 #31	ENSGT00940000161729 #32	ENSGT00940000160465 #33	ENSGT00940000153664.B #34	ENSGT00940000154942.h #35	ENSGT00390000007965 #36
spretus	MODERN SPECIES	12	Mme (MGP_SPRETEiJ_G0025974) #7	Gpr149 (MGP_SPRETEiJ_G0025973) #8	Dhx36 (MGP_SPRETEiJ_G0025972) #9	Arhgef26 (MGP_SPRETEiJ_G0025971) #10	MGP_SPRETEiJ_G0025970 #11	Rap2b (MGP_SPRETEiJ_G0025969) #12	P2ry1 (MGP_SPRETEiJ_G0025968) #13	Mbnl1 (MGP_SPRETEiJ_G0025967) #14	Sucnr1 (MGP_SPRETEiJ_G0025966) #15	Aadac (MGP_SPRETEiJ_G0025965) #16	Aadacl2 (MGP_SPRETEiJ_G0025964) #17	Aadacl2fm1 (MGP_SPRETEiJ_G0025963) #18	MGP_SPRETEiJ_G0025961 #19	MGP_SPRETEiJ_G0025960 #20	P2ry12 (MGP_SPRETEiJ_G0025959) #21	P2ry13 (MGP_SPRETEiJ_G0025958) #22	Gpr87 (MGP_SPRETEiJ_G0025957) #23	P2ry14 (MGP_SPRETEiJ_G0025956) #24	Gpr171 (MGP_SPRETEiJ_G0025955) #25	Med12l (MGP_SPRETEiJ_G0025954) #26	Clrn1 (MGP_SPRETEiJ_G0025953) #27	Siah2 (MGP_SPRETEiJ_G0025952) #28	Erich6 (MGP_SPRETEiJ_G0025951) #29	MGP_SPRETEiJ_G0025950 #30	Eif2a (MGP_SPRETEiJ_G0025949) #31	Serp1 (MGP_SPRETEiJ_G0025948) #32	Tsc22d2 (MGP_SPRETEiJ_G0025947) #33	Pfn2 (MGP_SPRETEiJ_G0025946) #34	Rnf13 (MGP_SPRETEiJ_G0025945) #35	Ankub1 (MGP_SPRETEiJ_G0025944) #36	Commd2 (MGP_SPRETEiJ_G0025943) #37
Steppe mouse	MODERN SPECIES	2700									ENSMSIG00000026274	Aadacl2fm2 (ENSMSIG00000026286) ##18	ENSMSIG00000026297 ##18	ENSMSIG00000026304	Igsf10 (ENSMSIG00000026317) #20	Med12l (ENSMSIG00000026353) #26	P2ry12 (ENSMSIG00000026846) #21	P2ry13 (ENSMSIG00000026850) #22	Gpr87 (ENSMSIG00000026852) #23	P2ry14 (ENSMSIG00000026863) #24	Gpr171 (ENSMSIG00000026880) #25	Clrn1 (ENSMSIG00000026893) #27	Mindy4b-ps (ENSMSIG00000026911)
Mouse	MODERN SPECIES	12	Mme (ENSMUSG00000027820) #7	Gpr149 (ENSMUSG00000043441) #8	Dhx36 (ENSMUSG00000027770) #9	Arhgef26 (ENSMUSG00000036885) #10	Rap2b (ENSMUSG00000036894) #12	P2ry1 (ENSMUSG00000027765) #13	Mbnl1 (ENSMUSG00000027763) #14	Sucnr1 (ENSMUSG00000027762) #15	Aadac (ENSMUSG00000027761) #16	Aadacl2 (ENSMUSG00000091376) #17	Aadacl2fm1 (ENSMUSG00000036951) #18	Aadacl2fm3 (ENSMUSG00000095522) ##18	Aadacl2fm2 (ENSMUSG00000090527) ##18	Igsf10 (ENSMUSG00000036334) #20	P2ry12 (ENSMUSG00000036353) #21	P2ry13 (ENSMUSG00000036362) #22	Gpr87 (ENSMUSG00000051431) #23	P2ry14 (ENSMUSG00000036381) #24	Gpr171 (ENSMUSG00000050075) #25	Med12l (ENSMUSG00000056476) #26	Clrn1 (ENSMUSG00000043850) #27	Mindy4b-ps (ENSMUSG00000101860)	Siah2 (ENSMUSG00000036432) #28	Erich6 (ENSMUSG00000070471) #29	Selenot (ENSMUSG00000075700) #30	Eif2a (ENSMUSG00000027810) #31	Serp1 (ENSMUSG00000027808) #32	Tsc22d2 (ENSMUSG00000027806) #33	Pfn2 (ENSMUSG00000027805) #34	Rnf13 (ENSMUSG00000036503) #35	Ankub1 (ENSMUSG00000074591) #36
Ryukyu mouse	MODERN SPECIES	12	Mme (MGP_CAROLIEiJ_G0025034) #7	Gpr149 (MGP_CAROLIEiJ_G0025033) #8	Dhx36 (MGP_CAROLIEiJ_G0025032) #9	Arhgef26 (MGP_CAROLIEiJ_G0025031) #10	MGP_CAROLIEiJ_G0025030 #11	Rap2b (MGP_CAROLIEiJ_G0025029) #12	P2ry1 (MGP_CAROLIEiJ_G0025028) #13	Mbnl1 (MGP_CAROLIEiJ_G0025027) #14	Sucnr1 (MGP_CAROLIEiJ_G0025026) #15	Aadac (MGP_CAROLIEiJ_G0025025) #16	Aadacl2 (MGP_CAROLIEiJ_G0025024) #17	Aadacl2fm1 (MGP_CAROLIEiJ_G0025023) #18	Aadacl2fm2 (MGP_CAROLIEiJ_G0025021) ##18	Igsf10 (MGP_CAROLIEiJ_G0025020) #20	P2ry12 (MGP_CAROLIEiJ_G0025019) #21	P2ry13 (MGP_CAROLIEiJ_G0025018) #22	Gpr87 (MGP_CAROLIEiJ_G0025017) #23	P2ry14 (MGP_CAROLIEiJ_G0025016) #24	Gpr171 (MGP_CAROLIEiJ_G0025015) #25	Med12l (MGP_CAROLIEiJ_G0025014) #26	Clrn1 (MGP_CAROLIEiJ_G0025013) #27	Siah2 (MGP_CAROLIEiJ_G0025012) #28	MGP_CAROLIEiJ_G0025011 #29	Selenot (MGP_CAROLIEiJ_G0025010) #30	Eif2a (MGP_CAROLIEiJ_G0025009) #31	Serp1 (MGP_CAROLIEiJ_G0025008) #32	Tsc22d2 (MGP_CAROLIEiJ_G0025007) #33	Wwtr1 (MGP_CAROLIEiJ_G0025006)	Tm4sf4 (MGP_CAROLIEiJ_G0025005)	Tm4sf1 (MGP_CAROLIEiJ_G0025004)	Mab21l1 (MGP_CAROLIEiJ_G0025003)