Amniota	ANCESTRAL SPECIES	35	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b	ENSGT00940000157740
Mammalia	ANCESTRAL SPECIES	19	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b	ENSGT00940000157260
Theria	ANCESTRAL SPECIES	16	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Eutheria	ANCESTRAL SPECIES		ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Glires	ANCESTRAL SPECIES		ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Rodentia	ANCESTRAL SPECIES		ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT01080000259389	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Muroidea	ANCESTRAL SPECIES	3	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Murinae	ANCESTRAL SPECIES	2	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Mus	ANCESTRAL SPECIES	3	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Mus_A	ANCESTRAL SPECIES	3	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Mus_B	ANCESTRAL SPECIES	5	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Mouse	MODERN SPECIES	13	Stpg1 (ENSMUSG00000028801) #7	Nipal3 (ENSMUSG00000028803) #8	Rcan3 (ENSMUSG00000059713) #9	Ncmap (ENSMUSG00000043924) #10	Srrm1 (ENSMUSG00000028809) #11	Clic4 (ENSMUSG00000037242) #12	Runx3 (ENSMUSG00000070691) #13	Syf2 (ENSMUSG00000028821) #14	Rsrp1 (ENSMUSG00000037266) #15	Tmem50a (ENSMUSG00000028822) #16	Rhd (ENSMUSG00000028825) #17	Maco1 (ENSMUSG00000028826) #18	Ldlrap1 (ENSMUSG00000037295) #19	Man1c1 (ENSMUSG00000037306) #20	Selenon (ENSMUSG00000050989) #21	Mtfr1l (ENSMUSG00000046671) #22	Aunip (ENSMUSG00000078521) #23	Paqr7 (ENSMUSG00000037348) #24	Stmn1 (ENSMUSG00000028832) #25	Pafah2 (ENSMUSG00000037366) #26	Extl1 (ENSMUSG00000028838) #27	Slc30a2 (ENSMUSG00000028836) #28	Trim63 (ENSMUSG00000028834) #29	Pdik1l (ENSMUSG00000050890) #30	Fam110d (ENSMUSG00000050105) #31	Gm30191 (ENSMUSG00000108398) #32	E130218I03Rik (ENSMUSG00000086322) #33	Zfp593 (ENSMUSG00000028840) #34	Cnksr1 (ENSMUSG00000028841) #35	Catsper4 (ENSMUSG00000048003) #36	Zpld2 (ENSMUSG00000073747) #37
Mus_C	ANCESTRAL SPECIES	2	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Steppe mouse	MODERN SPECIES	3343	Grhl3 (ENSMSIG00000003754)	Stpg1 (ENSMSIG00000003729) #7	Nipal3 (ENSMSIG00000003656) #8	ENSMSIG00000003535 #9	Srrm1 (ENSMSIG00000003321) #11	Clic4 (ENSMSIG00000003290) #12	Runx3 (ENSMSIG00000003230) #13	Syf2 (ENSMSIG00000003195) #14	Rsrp1 (ENSMSIG00000003163) #15	Tmem50a (ENSMSIG00000003128) #16	Rhd (ENSMSIG00000003109) #17	Maco1 (ENSMSIG00000003059) #18	Ldlrap1 (ENSMSIG00000003038) #19	Man1c1 (ENSMSIG00000002960) #20	Selenon (ENSMSIG00000002898) #21	Mtfr1l (ENSMSIG00000002873) #22	Aunip (ENSMSIG00000002831) #23	Paqr7 (ENSMSIG00000002813) #24	Stmn1 (ENSMSIG00000002759) #25	Pafah2 (ENSMSIG00000002623) #26	Extl1 (ENSMSIG00000002528) #27	Slc30a2 (ENSMSIG00000002431) #28	Trim63 (ENSMSIG00000002380) #29	Pdik1l (ENSMSIG00000002326) #30	Fam110d (ENSMSIG00000002311) #31	Gm30191 (ENSMSIG00000002277) #32	Zfp593 (ENSMSIG00000002253) #34	E130218I03Rik (ENSMSIG00000002204) #33	Cnksr1 (ENSMSIG00000002083) #35	Catsper4 (ENSMSIG00000001922) #36	Zpld2 (ENSMSIG00000001888) #37
spretus	MODERN SPECIES	13	Stpg1 (MGP_SPRETEiJ_G0027620) #7	Nipal3 (MGP_SPRETEiJ_G0027619) #8	Rcan3 (MGP_SPRETEiJ_G0027618) #9	Ncmap (MGP_SPRETEiJ_G0027617) #10	Srrm1 (MGP_SPRETEiJ_G0027616) #11	Clic4 (MGP_SPRETEiJ_G0027615) #12	Runx3 (MGP_SPRETEiJ_G0027614) #13	Syf2 (MGP_SPRETEiJ_G0027613) #14	Rsrp1 (MGP_SPRETEiJ_G0027612) #15	Tmem50a (MGP_SPRETEiJ_G0027611) #16	Rhd (MGP_SPRETEiJ_G0027610) #17	Maco1 (MGP_SPRETEiJ_G0027609) #18	Ldlrap1 (MGP_SPRETEiJ_G0027608) #19	Man1c1 (MGP_SPRETEiJ_G0027607) #20	MGP_SPRETEiJ_G0027606 #21	Mtfr1l (MGP_SPRETEiJ_G0027605) #22	Aunip (MGP_SPRETEiJ_G0027604) #23	Paqr7 (MGP_SPRETEiJ_G0027603) #24	Stmn1 (MGP_SPRETEiJ_G0027602) #25	Pafah2 (MGP_SPRETEiJ_G0027601) #26	Extl1 (MGP_SPRETEiJ_G0027600) #27	Slc30a2 (MGP_SPRETEiJ_G0027599) #28	Trim63 (MGP_SPRETEiJ_G0027598) #29	Pdik1l (MGP_SPRETEiJ_G0027597) #30	Fam110d (MGP_SPRETEiJ_G0027596) #31	Gm30191 (MGP_SPRETEiJ_G0027595) #32	E130218I03Rik (MGP_SPRETEiJ_G0027594) #33	Zfp593 (MGP_SPRETEiJ_G0027593) #34	Cnksr1 (MGP_SPRETEiJ_G0027592) #35	Catsper4 (MGP_SPRETEiJ_G0027591) #36	Zpld2 (MGP_SPRETEiJ_G0027590) #37
Ryukyu mouse	MODERN SPECIES	13	Stpg1 (MGP_CAROLIEiJ_G0026640) #7	Nipal3 (MGP_CAROLIEiJ_G0026639) #8	Rcan3 (MGP_CAROLIEiJ_G0026638) #9	Ncmap (MGP_CAROLIEiJ_G0026637) #10	Srrm1 (MGP_CAROLIEiJ_G0026636) #11	Clic4 (MGP_CAROLIEiJ_G0026635) #12	Runx3 (MGP_CAROLIEiJ_G0026634) #13	Syf2 (MGP_CAROLIEiJ_G0026633) #14	Rsrp1 (MGP_CAROLIEiJ_G0026632) #15	Tmem50a (MGP_CAROLIEiJ_G0026631) #16	Rhd (MGP_CAROLIEiJ_G0026630) #17	Maco1 (MGP_CAROLIEiJ_G0026629) #18	Ldlrap1 (MGP_CAROLIEiJ_G0026628) #19	Man1c1 (MGP_CAROLIEiJ_G0026627) #20	MGP_CAROLIEiJ_G0026626 #21	Mtfr1l (MGP_CAROLIEiJ_G0026625) #22	Aunip (MGP_CAROLIEiJ_G0026624) #23	Paqr7 (MGP_CAROLIEiJ_G0026623) #24	Stmn1 (MGP_CAROLIEiJ_G0026622) #25	Pafah2 (MGP_CAROLIEiJ_G0026621) #26	Extl1 (MGP_CAROLIEiJ_G0026620) #27	Slc30a2 (MGP_CAROLIEiJ_G0026619) #28	Trim63 (MGP_CAROLIEiJ_G0026618) #29	Pdik1l (MGP_CAROLIEiJ_G0026617) #30	Fam110d (MGP_CAROLIEiJ_G0026616) #31	Gm30191 (MGP_CAROLIEiJ_G0026615) #32	E130218I03Rik (MGP_CAROLIEiJ_G0026614) #33	Zfp593 (MGP_CAROLIEiJ_G0026613) #34	Cnksr1 (MGP_CAROLIEiJ_G0026612) #35	Catsper4 (MGP_CAROLIEiJ_G0026611) #36	MGP_CAROLIEiJ_G0026610 #37
Shrew mouse	MODERN SPECIES	19	Stpg1 (MGP_PahariEiJ_G0028973) #7	Nipal3 (MGP_PahariEiJ_G0028972) #8	Rcan3 (MGP_PahariEiJ_G0028971) #9	Ncmap (MGP_PahariEiJ_G0028970) #10	Srrm1 (MGP_PahariEiJ_G0028969) #11	Clic4 (MGP_PahariEiJ_G0028968) #12	Runx3 (MGP_PahariEiJ_G0028967) #13	Syf2 (MGP_PahariEiJ_G0028966) #14	Rsrp1 (MGP_PahariEiJ_G0028965) #15	Tmem50a (MGP_PahariEiJ_G0028964) #16	Rhd (MGP_PahariEiJ_G0028963) #17	Maco1 (MGP_PahariEiJ_G0028962) #18	Ldlrap1 (MGP_PahariEiJ_G0028961) #19	Man1c1 (MGP_PahariEiJ_G0028960) #20	MGP_PahariEiJ_G0028959 #21	Mtfr1l (MGP_PahariEiJ_G0028958) #22	Aunip (MGP_PahariEiJ_G0028957) #23	Paqr7 (MGP_PahariEiJ_G0028956) #24	Stmn1 (MGP_PahariEiJ_G0028955) #25	Pafah2 (MGP_PahariEiJ_G0028954) #26	Extl1 (MGP_PahariEiJ_G0028953) #27	Slc30a2 (MGP_PahariEiJ_G0028952) #28	Trim63 (MGP_PahariEiJ_G0028951) #29	Pdik1l (MGP_PahariEiJ_G0028950) #30	Fam110d (MGP_PahariEiJ_G0028949) #31	Gm30191 (MGP_PahariEiJ_G0028948) #32	E130218I03Rik (MGP_PahariEiJ_G0028947) #33	Zfp593 (MGP_PahariEiJ_G0028946) #34	Cnksr1 (MGP_PahariEiJ_G0028945) #35	Catsper4 (MGP_PahariEiJ_G0028944) #36	MGP_PahariEiJ_G0028943 #37
Rat	MODERN SPECIES	15	Nipal3 (ENSRNOG00000037165) #8	Rcan3 (ENSRNOG00000018576) #9	Ncmap (ENSRNOG00000048139) #10	Srrm1 (ENSRNOG00000018194) #11	Clic4 (ENSRNOG00000018109) #12	Runx3 (ENSRNOG00000054217) #13	Syf2 (ENSRNOG00000060597) #14	Rsrp1 (ENSRNOG00000017309)	Tmem50a (ENSRNOG00000017279) #16	Rhd (ENSRNOG00000017130) #17	Maco1 (ENSRNOG00000056156) #18	ENSRNOG00000067890	Ldlrap1 (ENSRNOG00000000151) #19	Man1c1 (ENSRNOG00000017087) #20	Selenon (ENSRNOG00000017078) #21	Mtfr1l (ENSRNOG00000016937) #22	Aunip (ENSRNOG00000022030) #23	Paqr7 (ENSRNOG00000022054) #24	Stmn1 (ENSRNOG00000016810) #25	Pafah2 (ENSRNOG00000022288) #26	Extl1 (ENSRNOG00000016776) #27	Slc30a2 (ENSRNOG00000054142) #28	Trim63 (ENSRNOG00000016543) #29	Pdik1l (ENSRNOG00000016536) #30	Fam110d (ENSRNOG00000016491) #31	LOC108351043 (ENSRNOG00000054734) #32	E130218I03Rik (ENSRNOG00000065422) #33	Zfp593 (ENSRNOG00000016392) #34	Cnksr1 (ENSRNOG00000022838) #35	Catsper4 (ENSRNOG00000016312) #36	Umodl (ENSRNOG00000037191) #37
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017.t #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017.t #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Golden Hamster	MODERN SPECIES	709	Grhl3 (ENSMAUG00000000979)	Stpg1 (ENSMAUG00000012732) #7	Nipal3 (ENSMAUG00000021437) #8	Rcan3 (ENSMAUG00000002939) #9	Ncmap (ENSMAUG00000014750) #10	Srrm1 (ENSMAUG00000015705) #11	Clic4 (ENSMAUG00000016358) #12	Runx3 (ENSMAUG00000010386) #13	Syf2 (ENSMAUG00000018974) #14	Rsrp1 (ENSMAUG00000021410) #15	Tmem50a (ENSMAUG00000018026) #16	Rhd (ENSMAUG00000010533) #17	Maco1 (ENSMAUG00000014109) #18	Ldlrap1 (ENSMAUG00000018853) #19	Man1c1 (ENSMAUG00000018414) #20	Mtfr1l (ENSMAUG00000006161) #22	Aunip (ENSMAUG00000015763) #23	Paqr7 (ENSMAUG00000009753) #24	Stmn1 (ENSMAUG00000011932) #25	Pafah2 (ENSMAUG00000009805) #26	Extl1 (ENSMAUG00000012590) #27	Slc30a2 (ENSMAUG00000014390) #28	Trim63 (ENSMAUG00000020145) #29	Pdik1l (ENSMAUG00000017570) #30	Fam110d (ENSMAUG00000015556) #31	Gm30191 (ENSMAUG00000015307) #32	Zfp593 (ENSMAUG00000022183) #34	E130218I03Rik (ENSMAUG00000015371) #33	Cnksr1 (ENSMAUG00000015929) #35	Catsper4 (ENSMAUG00000022207) #36	Zpld2 (ENSMAUG00000018467) #37
Chinese hamster chok1gshd	MODERN SPECIES	111	Stpg1 (ENSCGRG00001019578) #7	Nipal3 (ENSCGRG00001009567) #8	Rcan3 (ENSCGRG00001021122) #9	Ncmap (ENSCGRG00001023666) #10	ENSCGRG00001014174 #11	Clic4 (ENSCGRG00001015756) #12	Runx3 (ENSCGRG00001017975) #13	Syf2 (ENSCGRG00001020733) #14	Rsrp1 (ENSCGRG00001024049) #15	ENSCGRG00001024623 #16	Rhd (ENSCGRG00001014832) #17	Maco1 (ENSCGRG00001024942) #18	Ldlrap1 (ENSCGRG00001003725) #19	Man1c1 (ENSCGRG00001009664) #20	Selenon (ENSCGRG00001024285) #21	Mtfr1l (ENSCGRG00001011875) #22	Aunip (ENSCGRG00001017106) #23	Paqr7 (ENSCGRG00001002911) #24	Stmn1 (ENSCGRG00001019131) #25	Pafah2 (ENSCGRG00001024932) #26	Extl1 (ENSCGRG00001000575) #27	Slc30a2 (ENSCGRG00001021430) #28	Trim63 (ENSCGRG00001011657) #29	ENSCGRG00001011749	Pdik1l (ENSCGRG00001019407) #30	Fam110d (ENSCGRG00001002609) #31	Gm30191 (ENSCGRG00001023133) #32	Zfp593 (ENSCGRG00001010679) #34	E130218I03Rik (ENSCGRG00001011451) #33	Cnksr1 (ENSCGRG00001024045) #35	Catsper4 (ENSCGRG00001006536) #36
Cricetidae_B	ANCESTRAL SPECIES	2	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017.t #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Prairie vole	MODERN SPECIES	1	Myom3 (ENSMOCG00000020835)	Grhl3 (ENSMOCG00000001299)	Stpg1 (ENSMOCG00000011459) #7	ENSMOCG00000008870 #8	Rcan3 (ENSMOCG00000014967) #9	Ncmap (ENSMOCG00000015788) #10	Clic4 (ENSMOCG00000016683) #12	Runx3 (ENSMOCG00000017426) #13	Syf2 (ENSMOCG00000022938) #14	Rsrp1 (ENSMOCG00000000654) #15	Tmem50a (ENSMOCG00000004610) #16	Maco1 (ENSMOCG00000016786) #18	Ldlrap1 (ENSMOCG00000003197) #19	Man1c1 (ENSMOCG00000005622) #20	Selenon (ENSMOCG00000016304) #21	Mtfr1l (ENSMOCG00000012791) #22	Aunip (ENSMOCG00000013289) #23	Paqr7 (ENSMOCG00000020174) #24	Stmn1 (ENSMOCG00000021114) #25	Pafah2 (ENSMOCG00000008119) #26	Extl1 (ENSMOCG00000020884) #27	Slc30a2 (ENSMOCG00000013301) #28	Trim63 (ENSMOCG00000002254) #29	Pdik1l (ENSMOCG00000005467) #30	Fam110d (ENSMOCG00000006661) #31	Gm30191 (ENSMOCG00000016150) #32	Zfp593 (ENSMOCG00000013349) #34	E130218I03Rik (ENSMOCG00000013744) #33	Cnksr1 (ENSMOCG00000021432) #35	Catsper4 (ENSMOCG00000018811) #36	Zpld2 (ENSMOCG00000010562) #37
Northern American deer mouse	MODERN SPECIES	11	Stpg1 (ENSPEMG00000009528) #7	Nipal3 (ENSPEMG00000018226) #8	Rcan3 (ENSPEMG00000004682) #9	Ncmap (ENSPEMG00000018334) #10	ENSPEMG00000006254 #11	Clic4 (ENSPEMG00000020345) #12	Runx3 (ENSPEMG00000010606) #13	Syf2 (ENSPEMG00000008283) #14	Rsrp1 (ENSPEMG00000001612) #15	Tmem50a (ENSPEMG00000000635) #16	Rhd (ENSPEMG00000017512) #17	Maco1 (ENSPEMG00000018069) #18	Ldlrap1 (ENSPEMG00000016859) #19	Man1c1 (ENSPEMG00000011993) #20	Selenon (ENSPEMG00000021064) #21	Mtfr1l (ENSPEMG00000020917) #22	Aunip (ENSPEMG00000020908) #23	Paqr7 (ENSPEMG00000031192) #24	ENSPEMG00000020535 #25	Pafah2 (ENSPEMG00000012512) #26	Extl1 (ENSPEMG00000018307) #27	Slc30a2 (ENSPEMG00000004843) #28	Trim63 (ENSPEMG00000006818) #29	Pdik1l (ENSPEMG00000026039) #30	Fam110d (ENSPEMG00000016313) #31	Gm30191 (ENSPEMG00000012736) #32	Zfp593 (ENSPEMG00000011884) #34	E130218I03Rik (ENSPEMG00000012827) #33	Cnksr1 (ENSPEMG00000008995) #35	Catsper4 (ENSPEMG00000006617) #36	ENSPEMG00000014772 #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	968															Selenon (ENSNGAG00000004919) #21	Mtfr1l (ENSNGAG00000011816) #22	Aunip (ENSNGAG00000012383) #23	Paqr7 (ENSNGAG00000012530) #24	Stmn1 (ENSNGAG00000017358) #25	ENSNGAG00000010377	Pafah2 (ENSNGAG00000012971) #26	Extl1 (ENSNGAG00000019216) #27	Slc30a2 (ENSNGAG00000020014) #28	Trim63 (ENSNGAG00000019889) #29	ENSNGAG00000021181	Pdik1l (ENSNGAG00000004860) #30	Fam110d (ENSNGAG00000006834) #31	Gm30191 (ENSNGAG00000009964) #32	Zfp593 (ENSNGAG00000011656) #34	ENSNGAG00000012993	Cnksr1 (ENSNGAG00000021886) #35
Lesser Egyptian jerboa	MODERN SPECIES	63	Il22ra1 (ENSJJAG00000017430)	Ifnlr1 (ENSJJAG00000011888)	ENSJJAG00000016170	Stpg1 (ENSJJAG00000007414) #7	Nipal3 (ENSJJAG00000015416) #8	Rcan3 (ENSJJAG00000011623) #9	Srrm1 (ENSJJAG00000018643) #11	Clic4 (ENSJJAG00000023938) #12	Runx3 (ENSJJAG00000003722) #13	Syf2 (ENSJJAG00000013301) #14	Rsrp1 (ENSJJAG00000001101) #15	Maco1 (ENSJJAG00000002912) #18	Ldlrap1 (ENSJJAG00000009407) #19	Man1c1 (ENSJJAG00000011381) #20	Selenon (ENSJJAG00000007206) #21	Mtfr1l (ENSJJAG00000005254) #22	Paqr7 (ENSJJAG00000004766) #24	Stmn1 (ENSJJAG00000023623) #25	Pafah2 (ENSJJAG00000008153) #26	Slc30a2 (ENSJJAG00000012135) #28	Trim63 (ENSJJAG00000002973) #29	Pdik1l (ENSJJAG00000008196) #30	Zfp593 (ENSJJAG00000006095) #34	Cep85 (ENSJJAG00000000739)	Sh3bgrl3 (ENSJJAG00000023653)	Fabp6 (ENSJJAG00000012423)	Pwwp2a (ENSJJAG00000003162)	Ttc1 (ENSJJAG00000002255)	Adra1b (ENSJJAG00000001311)	ENSJJAG00000000479	ENSJJAG00000004203
Kangaroo rat	MODERN SPECIES	325	Stpg1 (ENSDORG00000012246) #7	Nipal3 (ENSDORG00000015286) #8	Rcan3 (ENSDORG00000007662) #9	ENSDORG00000002716	ENSDORG00000028601 #11	Clic4 (ENSDORG00000008730) #12	Runx3 (ENSDORG00000024774) #13	Syf2 (ENSDORG00000001274) #14	Rsrp1 (ENSDORG00000025796) #15	Tmem50a (ENSDORG00000013839) #16	Rhd (ENSDORG00000013842) #17	Maco1 (ENSDORG00000000638) #18	Ldlrap1 (ENSDORG00000000640) #19	Man1c1 (ENSDORG00000013005) #20	Selenon (ENSDORG00000004349) #21	Mtfr1l (ENSDORG00000010828) #22	Aunip (ENSDORG00000010829) #23	Paqr7 (ENSDORG00000004272) #24	ENSDORG00000001797 #25	Pafah2 (ENSDORG00000003820) #26	Extl1 (ENSDORG00000003821) #27	Slc30a2 (ENSDORG00000003823) #28	Trim63 (ENSDORG00000003824) #29	Pdik1l (ENSDORG00000028227) #30	Gm30191 (ENSDORG00000026074) #32	Zfp593 (ENSDORG00000028366) #34	E130218I03Rik (ENSDORG00000026750) #33	Cnksr1 (ENSDORG00000003511) #35	Catsper4 (ENSDORG00000003510) #36	Cep85 (ENSDORG00000011337)	Sh3bgrl3 (ENSDORG00000028188)
Rodentia_A	ANCESTRAL SPECIES		ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.m.a #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412.j #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260
Naked mole-rat female	MODERN SPECIES	26	NIPAL3 (ENSHGLG00000047881) #8	RCAN3 (ENSHGLG00000010305) #9	ENSHGLG00000045032 #10	ENSHGLG00000037226	ENSHGLG00000017105 #11	ENSHGLG00000050374 #12	RUNX3 (ENSHGLG00000043838) #13	ENSHGLG00000045581	SYF2 (ENSHGLG00000044606) #14	TMEM50A (ENSHGLG00000017064) #16	ENSHGLG00000010472 #17	MACO1 (ENSHGLG00000010882) #18	LDLRAP1 (ENSHGLG00000012177) #19	MAN1C1 (ENSHGLG00000043962) #20	SELENON (ENSHGLG00000010947) #21	MTFR1L (ENSHGLG00000017097) #22	AUNIP (ENSHGLG00000035083) #23	PAQR7 (ENSHGLG00000012421) #24	ENSHGLG00000012564 #25	ENSHGLG00000014002	PAFAH2 (ENSHGLG00000039339) #26	EXTL1 (ENSHGLG00000037665) #27	SLC30A2 (ENSHGLG00000011416) #28	ENSHGLG00000010242	TRIM63 (ENSHGLG00000011642) #29	PDIK1L (ENSHGLG00000046131) #30	FAM110D (ENSHGLG00000011546) #31	C1orf232 (ENSHGLG00000013042) #32	ZNF593 (ENSHGLG00000011938) #34	ENSHGLG00000012204	CNKSR1 (ENSHGLG00000012930) #35
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.m.a #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412.j #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260
Guinea pig	MODERN SPECIES	25	STPG1 (ENSCPOG00000008857) #7	NIPAL3 (ENSCPOG00000032188) #8	RCAN3 (ENSCPOG00000003363) #9	NCMAP (ENSCPOG00000037048) #10	SRRM1 (ENSCPOG00000015594) #11	CLIC4 (ENSCPOG00000038478) #12	RUNX3 (ENSCPOG00000038589) #13	SYF2 (ENSCPOG00000005326) #14	RSRP1 (ENSCPOG00000014651) #15	TMEM50A (ENSCPOG00000033045) #16	ENSCPOG00000020328 #17	MACO1 (ENSCPOG00000012618) #18	LDLRAP1 (ENSCPOG00000038658) #19	MAN1C1 (ENSCPOG00000012627) #20	SELENON (ENSCPOG00000030792) #21	MTFR1L (ENSCPOG00000030432) #22	AUNIP (ENSCPOG00000026702) #23	PAQR7 (ENSCPOG00000038910) #24	STMN1 (ENSCPOG00000035267) #25	PAFAH2 (ENSCPOG00000003472) #26	EXTL1 (ENSCPOG00000000922) #27	SLC30A2 (ENSCPOG00000003475) #28	TRIM63 (ENSCPOG00000022922) #29	PDIK1L (ENSCPOG00000011692) #30	FAM110D (ENSCPOG00000039832) #31	C1orf232 (ENSCPOG00000030787) #32	ZNF593OS (ENSCPOG00000031348) #33	ZNF593 (ENSCPOG00000035949) #34	CNKSR1 (ENSCPOG00000007056) #35	CEP85 (ENSCPOG00000007069)	SH3BGRL3 (ENSCPOG00000007077)
Hystricomorpha_b	ANCESTRAL SPECIES	7	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.m.a #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412.j #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260
Long-tailed chinchilla	MODERN SPECIES	159	STPG1 (ENSCLAG00000010905) #7	NIPAL3 (ENSCLAG00000008287) #8	RCAN3 (ENSCLAG00000008751) #9	NCMAP (ENSCLAG00000009955) #10	SRRM1 (ENSCLAG00000014592) #11	CLIC4 (ENSCLAG00000007919) #12	RUNX3 (ENSCLAG00000010119) #13	SYF2 (ENSCLAG00000008474) #14	ENSCLAG00000008988 #15	ENSCLAG00000009626 #16	ENSCLAG00000010154 #17	MACO1 (ENSCLAG00000010148) #18	LDLRAP1 (ENSCLAG00000013635) #19	MAN1C1 (ENSCLAG00000013310) #20	SELENON (ENSCLAG00000009093) #21	MTFR1L (ENSCLAG00000012749) #22	AUNIP (ENSCLAG00000014153) #23	PAQR7 (ENSCLAG00000017977) #24	STMN1 (ENSCLAG00000014558) #25	PAFAH2 (ENSCLAG00000010400) #26	EXTL1 (ENSCLAG00000009216) #27	SLC30A2 (ENSCLAG00000010472) #28	TRIM63 (ENSCLAG00000009429) #29	PDIK1L (ENSCLAG00000010649) #30	FAM110D (ENSCLAG00000010682) #31	C1orf232 (ENSCLAG00000011904) #32	ZNF593 (ENSCLAG00000011066) #34	ZNF593OS (ENSCLAG00000010913) #33	CNKSR1 (ENSCLAG00000006569) #35	CEP85 (ENSCLAG00000008438)	UBXN11 (ENSCLAG00000009843)
Degu	MODERN SPECIES	133	RCAN3 (ENSODEG00000014403) #9	NCMAP (ENSODEG00000014196) #10	ENSODEG00000013381 #11	ENSODEG00000014994	CLIC4 (ENSODEG00000015014) #12	RUNX3 (ENSODEG00000013557) #13	ENSODEG00000020175	ENSODEG00000014338 #14	RSRP1 (ENSODEG00000014609) #15	ENSODEG00000014039 #16	ENSODEG00000013632 #17	MACO1 (ENSODEG00000014747) #18	LDLRAP1 (ENSODEG00000013216) #19	MAN1C1 (ENSODEG00000013579) #20	SELENON (ENSODEG00000014831) #21	MTFR1L (ENSODEG00000013501) #22	AUNIP (ENSODEG00000013714) #23	PAQR7 (ENSODEG00000020104) #24	ENSODEG00000014041 #25	ENSODEG00000014157	PAFAH2 (ENSODEG00000015383) #26	EXTL1 (ENSODEG00000013752) #27	SLC30A2 (ENSODEG00000014072) #28	TRIM63 (ENSODEG00000014129) #29
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017.w.a #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Marmotini	ANCESTRAL SPECIES		ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017.w.a.a #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.v #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Alpin marmot	MODERN SPECIES	15	RCAN3 (ENSMMMG00000018455) #9	NCMAP (ENSMMMG00000018395) #10	SRRM1 (ENSMMMG00000018360) #11	CLIC4 (ENSMMMG00000018318) #12	ENSMMMG00000018312	ENSMMMG00000018294 #13	SYF2 (ENSMMMG00000018261) #14	RSRP1 (ENSMMMG00000018254) #15	TMEM50A (ENSMMMG00000018240) #16	ENSMMMG00000015263 #17	MACO1 (ENSMMMG00000015231) #18	LDLRAP1 (ENSMMMG00000015218) #19	MAN1C1 (ENSMMMG00000014472) #20	ENSMMMG00000014449 #21	ENSMMMG00000014442 #21	MTFR1L (ENSMMMG00000014427) #22	AUNIP (ENSMMMG00000014413) #23	PAQR7 (ENSMMMG00000014408) #24	ENSMMMG00000014400 #25	PAFAH2 (ENSMMMG00000014388) #26	EXTL1 (ENSMMMG00000014376) #27	SLC30A2 (ENSMMMG00000014272) #28	TRIM63 (ENSMMMG00000014259) #29	FAM110D (ENSMMMG00000014243) #31	C1orf232 (ENSMMMG00000014234) #32	ZNF593 (ENSMMMG00000014229) #34	ZNF593OS (ENSMMMG00000014217) #33	ENSMMMG00000014210 #35	ENSMMMG00000014199 #35	CATSPER4 (ENSMMMG00000014170) #36	CEP85 (ENSMMMG00000014143)
Marmotini_b	ANCESTRAL SPECIES		ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017.w.a.a #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.v #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Arctic ground squirrel	MODERN SPECIES	92						SRRM1 (ENSUPAG00010021790) #11	ENSUPAG00010021786 #12	RUNX3 (ENSUPAG00010021783) #13	SYF2 (ENSUPAG00010021777) #14	RSRP1 (ENSUPAG00010021775) #15	TMEM50A (ENSUPAG00010021773) #16	ENSUPAG00010021772 #17	MACO1 (ENSUPAG00010021769) #18	MAN1C1 (ENSUPAG00010021756) #20	SELENON (ENSUPAG00010021750) #21	MTFR1L (ENSUPAG00010021746) #22	AUNIP (ENSUPAG00010021743) #23	PAQR7 (ENSUPAG00010021741) #24	ENSUPAG00010021739 #25	PAFAH2 (ENSUPAG00010021733) #26	EXTL1 (ENSUPAG00010021721) #27	SLC30A2 (ENSUPAG00010021717) #28	TRIM63 (ENSUPAG00010021713) #29	PDIK1L (ENSUPAG00010021712) #30	FAM110D (ENSUPAG00010021710) #31	ZNF593 (ENSUPAG00010021709) #34	C1orf232 (ENSUPAG00010021707) #32	ENSUPAG00010021706 #33	CNKSR1 (ENSUPAG00010021586) #35	CATSPER4 (ENSUPAG00010021560) #36	ENSUPAG00010021555 #37
Squirrel	MODERN SPECIES	74	GRHL3 (ENSSTOG00000023529)	STPG1 (ENSSTOG00000020596) #7	NIPAL3 (ENSSTOG00000002868) #8	RCAN3 (ENSSTOG00000002884) #9	NCMAP (ENSSTOG00000014647) #10	SRRM1 (ENSSTOG00000014640) #11	ENSSTOG00000002184 #12	RUNX3 (ENSSTOG00000022471) #13	SYF2 (ENSSTOG00000023984) #14	TMEM50A (ENSSTOG00000022246) #16	ENSSTOG00000013643 #17	MACO1 (ENSSTOG00000013650) #18	LDLRAP1 (ENSSTOG00000019764) #19	ENSSTOG00000034000 #20	SELENON (ENSSTOG00000032252) #21	MTFR1L (ENSSTOG00000023300) #22	AUNIP (ENSSTOG00000003781) #23	PAQR7 (ENSSTOG00000003791) #24	ENSSTOG00000021708 #25	PAFAH2 (ENSSTOG00000002899) #26	EXTL1 (ENSSTOG00000022136) #27	SLC30A2 (ENSSTOG00000004955) #28	TRIM63 (ENSSTOG00000004982) #29	PDIK1L (ENSSTOG00000004995) #30	FAM110D (ENSSTOG00000023295) #31	C1orf232 (ENSSTOG00000030099) #32	ZNF593 (ENSSTOG00000022153) #34	ZNF593OS (ENSSTOG00000032687) #33	CNKSR1 (ENSSTOG00000020206) #35	CATSPER4 (ENSSTOG00000028150) #36	ENSSTOG00000033310
Eurasian red squirrel	MODERN SPECIES		STPG1 (ENSSVLG00005001000) #7	NIPAL3 (ENSSVLG00005001037) #8	RCAN3 (ENSSVLG00005001080) #9	NCMAP (ENSSVLG00005001114) #10	SRRM1 (ENSSVLG00005001180) #11	ENSSVLG00005001230 #12	RUNX3 (ENSSVLG00005001263) #13	SYF2 (ENSSVLG00005001292) #14	RSRP1 (ENSSVLG00005001313) #15	TMEM50A (ENSSVLG00005001335) #16	ENSSVLG00005001369 #17	MACO1 (ENSSVLG00005001436) #18	LDLRAP1 (ENSSVLG00005001468) #19	MAN1C1 (ENSSVLG00005001513) #20	ENSSVLG00005001587 #21	MTFR1L (ENSSVLG00005001597) #22	AUNIP (ENSSVLG00005001627) #23	PAQR7 (ENSSVLG00005001646) #24	STMN1 (ENSSVLG00005001664) #25	PAFAH2 (ENSSVLG00005001686) #26	EXTL1 (ENSSVLG00005001705) #27	SLC30A2 (ENSSVLG00005001743) #28	TRIM63 (ENSSVLG00005001801) #29	PDIK1L (ENSSVLG00005001816) #30	FAM110D (ENSSVLG00005001832) #31	C1orf232 (ENSSVLG00005001854) #32	ZNF593 (ENSSVLG00005001892) #34	ZNF593OS (ENSSVLG00005001931) #33	ENSSVLG00005001947 #35	ENSSVLG00005001967 #35	CATSPER4 (ENSSVLG00005002009) #36
Lagomorpha	ANCESTRAL SPECIES	21	ENSGT00940000157970	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.a.b ##11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312.k #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Rabbit	MODERN SPECIES	4	TMEM201 (ENSOCUG00000004170)	PIK3CD (ENSOCUG00000011054)	CLSTN1 (ENSOCUG00000011064)	CTNNBIP1 (ENSOCUG00000030596)	LZIC (ENSOCUG00000025623)	ENSOCUG00000023212	UBE4B (ENSOCUG00000016997)	KIF1B (ENSOCUG00000002763)	PGD (ENSOCUG00000014719)	CENPS (ENSOCUG00000017682)	CORT (ENSOCUG00000021685)	ENSOCUG00000036902	PEX14 (ENSOCUG00000015036)	CASZ1 (ENSOCUG00000026310)	ENSOCUG00000030659 #21	MTFR1L (ENSOCUG00000002456) #22	ENSOCUG00000039454	AUNIP (ENSOCUG00000002458) #23	PAQR7 (ENSOCUG00000037257) #24	ENSOCUG00000006493 #25	PAFAH2 (ENSOCUG00000012696) #26	EXTL1 (ENSOCUG00000006878) #27	SLC30A2 (ENSOCUG00000006885) #28	TRIM63 (ENSOCUG00000013564) #29	PDIK1L (ENSOCUG00000010956) #30	FAM110D (ENSOCUG00000039461) #31	ENSOCUG00000033604 #32	ZNF593 (ENSOCUG00000013999) #34	ZNF593OS (ENSOCUG00000038218) #33	CNKSR1 (ENSOCUG00000023717) #35	CATSPER4 (ENSOCUG00000002929) #36
Pika	MODERN SPECIES	3967										TMEM50A (ENSOPRG00000001182) #16	ENSOPRG00000001188 #17	MACO1 (ENSOPRG00000001211) #18	LDLRAP1 (ENSOPRG00000001235) #19	ENSOPRG00000001261 #20	SELENON (ENSOPRG00000001287) #21	MTFR1L (ENSOPRG00000001328) #22	AUNIP (ENSOPRG00000001340) #23	PAQR7 (ENSOPRG00000001345) #24	STMN1 (ENSOPRG00000001346) #25	PAFAH2 (ENSOPRG00000001355) #26	EXTL1 (ENSOPRG00000001366) #27	SLC30A2 (ENSOPRG00000001390) #28	TRIM63 (ENSOPRG00000001404) #29	PDIK1L (ENSOPRG00000001429) #30	FAM110D (ENSOPRG00000001433) #31	ZNF593 (ENSOPRG00000001439) #34	CNKSR1 (ENSOPRG00000001452) #35	ENSOPRG00000001487	CEP85 (ENSOPRG00000001515)	SH3BGRL3 (ENSOPRG00000001538)	ENSOPRG00000001544
Tree shrew	MODERN SPECIES	742																MTFR1L (ENSTBEG00000010931) #22	AUNIP (ENSTBEG00000011043) #23
Primates	ANCESTRAL SPECIES	4	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00940000158233 #8	ENSGT01100000267028	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Platyrrhini	ANCESTRAL SPECIES		ENSGT01100000267028	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.a #12	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Cebidae	ANCESTRAL SPECIES	1	ENSGT00940000158233 #8	ENSGT01100000267028	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Marmoset	MODERN SPECIES	19	NIPAL3 (ENSCJAG00000020848) #8	RCAN3 (ENSCJAG00000020838) #9	NCMAP (ENSCJAG00000042100) #10	SRRM1 (ENSCJAG00000020822) #11	ENSCJAG00000039482 #12	ENSCJAG00000079913	RUNX3 (ENSCJAG00000077193) #13	SYF2 (ENSCJAG00000046570) #14	RSRP1 (ENSCJAG00000018568) #15	TMEM50A (ENSCJAG00000044784) #16	ENSCJAG00000018582 #17	MACO1 (ENSCJAG00000018625) #18	LDLRAP1 (ENSCJAG00000009366) #19	MAN1C1 (ENSCJAG00000009386) #20	SELENON (ENSCJAG00000040406) #21	MTFR1L (ENSCJAG00000055837) #22	AUNIP (ENSCJAG00000009447) #23	PAQR7 (ENSCJAG00000021977) #24	ENSCJAG00000009462 #25	PAFAH2 (ENSCJAG00000009489) #26	EXTL1 (ENSCJAG00000009501) #27	SLC30A2 (ENSCJAG00000009522) #28	TRIM63 (ENSCJAG00000009571) #29	PDIK1L (ENSCJAG00000064544) #30	FAM110D (ENSCJAG00000039371) #31	C1orf232 (ENSCJAG00000040746) #32	CNKSR1 (ENSCJAG00000009629) #35	ZNF593OS (ENSCJAG00000045933) #33	CATSPER4 (ENSCJAG00000009681) #36	CEP85 (ENSCJAG00000009698)	SH3BGRL3 (ENSCJAG00000040511)
Cebidae_a	ANCESTRAL SPECIES		ENSGT00940000158233 #8	ENSGT01100000267028	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390.a #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b	ENSGT00940000157260
Capuchin	MODERN SPECIES	87	ENSCCAG00000034415	RCAN3 (ENSCCAG00000026460) #9	NCMAP (ENSCCAG00000018432) #10	SRRM1 (ENSCCAG00000029474) #11	CLIC4 (ENSCCAG00000022797) #12	ENSCCAG00000020399	RUNX3 (ENSCCAG00000020981) #13	SYF2 (ENSCCAG00000022459) #14	RSRP1 (ENSCCAG00000033350) #15	TMEM50A (ENSCCAG00000028013) #16	ENSCCAG00000020865 #17	MACO1 (ENSCCAG00000030283) #18	LDLRAP1 (ENSCCAG00000026769) #19	MAN1C1 (ENSCCAG00000024764) #20	ENSCCAG00000031215 #21	MTFR1L (ENSCCAG00000012327) #22	AUNIP (ENSCCAG00000030698) #23	ENSCCAG00000028161 #25	PAFAH2 (ENSCCAG00000024562) #26	EXTL1 (ENSCCAG00000033300) #27	SLC30A2 (ENSCCAG00000021276) #28	TRIM63 (ENSCCAG00000034250) #29	ENSCCAG00000019830	PDIK1L (ENSCCAG00000033260) #30	ENSCCAG00000026100	FAM110D (ENSCCAG00000018942) #31	C1orf232 (ENSCCAG00000025437) #32	ZNF593 (ENSCCAG00000030595) #34	ZNF593OS (ENSCCAG00000033003) #33	CNKSR1 (ENSCCAG00000020078) #35	CATSPER4 (ENSCCAG00000031230) #36
Bolivian squirrel monkey	MODERN SPECIES	110	NIPAL3 (ENSSBOG00000002152) #8	RCAN3 (ENSSBOG00000007870) #9	NCMAP (ENSSBOG00000031499) #10	SRRM1 (ENSSBOG00000019884) #11	CLIC4 (ENSSBOG00000021456) #12	RUNX3 (ENSSBOG00000019630) #13	SYF2 (ENSSBOG00000020184) #14	ENSSBOG00000024990 #15	TMEM50A (ENSSBOG00000034646) #16	ENSSBOG00000031589	ENSSBOG00000029967 #17	MACO1 (ENSSBOG00000034570) #18	LDLRAP1 (ENSSBOG00000035348) #19	MAN1C1 (ENSSBOG00000020850) #20	SELENON (ENSSBOG00000019034) #21	MTFR1L (ENSSBOG00000031796) #22	AUNIP (ENSSBOG00000032673) #23	STMN1 (ENSSBOG00000029102) #25	PAFAH2 (ENSSBOG00000024807) #26	EXTL1 (ENSSBOG00000025053) #27	SLC30A2 (ENSSBOG00000022653) #28	TRIM63 (ENSSBOG00000025687) #29	PDIK1L (ENSSBOG00000032991) #30	ENSSBOG00000022390	FAM110D (ENSSBOG00000022708) #31	C1orf232 (ENSSBOG00000028377) #32	ZNF593 (ENSSBOG00000030845) #34	ZNF593OS (ENSSBOG00000022838) #33	CNKSR1 (ENSSBOG00000025367) #35	CATSPER4 (ENSSBOG00000032368) #36	CEP85 (ENSSBOG00000021910)
Mas night monkey	MODERN SPECIES	1281	NCMAP (ENSANAG00000026874) #10	SRRM1 (ENSANAG00000035606) #11	ENSANAG00000036667 #12	ENSANAG00000036988	ENSANAG00000032169	RUNX3 (ENSANAG00000030013) #13	ENSANAG00000031918	SYF2 (ENSANAG00000032473) #14	RSRP1 (ENSANAG00000028529) #15	ENSANAG00000032582 #16	ENSANAG00000031924 #17	MACO1 (ENSANAG00000024751) #18	LDLRAP1 (ENSANAG00000023810) #19	MAN1C1 (ENSANAG00000030308) #20	SELENON (ENSANAG00000020436) #21	MTFR1L (ENSANAG00000026966) #22	PAQR7 (ENSANAG00000037034) #24	STMN1 (ENSANAG00000030242) #25	ENSANAG00000029824	PAFAH2 (ENSANAG00000028517) #26	EXTL1 (ENSANAG00000023474) #27	SLC30A2 (ENSANAG00000037238) #28	TRIM63 (ENSANAG00000017899) #29	ENSANAG00000037010	PDIK1L (ENSANAG00000026093) #30	FAM110D (ENSANAG00000027564) #31	C1orf232 (ENSANAG00000034940) #32	ZNF593 (ENSANAG00000034118) #34	ZNF593OS (ENSANAG00000020867) #33	CNKSR1 (ENSANAG00000021033) #35	CATSPER4 (ENSANAG00000037805) #36
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00940000158233 #8	ENSGT01100000267028	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Hominidae	ANCESTRAL SPECIES	3	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b.c #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b.c #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Pan	ANCESTRAL SPECIES		ENSGT00910000147438	ENSGT00940000157970	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Chimpanzee	MODERN SPECIES		ENSPTRG00000049446	GRHL3 (ENSPTRG00000000344)	STPG1 (ENSPTRG00000000345) #7	NIPAL3 (ENSPTRG00000000346) #8	RCAN3 (ENSPTRG00000045149) #9	NCMAP (ENSPTRG00000000348) #10	SRRM1 (ENSPTRG00000000349) #11	CLIC4 (ENSPTRG00000000350) #12	RUNX3 (ENSPTRG00000000351) #13	SYF2 (ENSPTRG00000000352) #14	RSRP1 (ENSPTRG00000000353) #15	MACO1 (ENSPTRG00000029594) #18	LDLRAP1 (ENSPTRG00000000362) #19	MAN1C1 (ENSPTRG00000000363) #20	SELENON (ENSPTRG00000022721) #21	MTFR1L (ENSPTRG00000000365) #22	AUNIP (ENSPTRG00000040706) #23	PAQR7 (ENSPTRG00000046691) #24	STMN1 (ENSPTRG00000000369) #25	PAFAH2 (ENSPTRG00000000370) #26	EXTL1 (ENSPTRG00000000371) #27	SLC30A2 (ENSPTRG00000000372) #28	TRIM63 (ENSPTRG00000000373) #29	PDIK1L (ENSPTRG00000000374) #30	FAM110D (ENSPTRG00000022777) #31	C1H1orf232 (ENSPTRG00000050100) #32	ZNF593 (ENSPTRG00000000375) #34	ENSPTRG00000050455	CNKSR1 (ENSPTRG00000048000) #35	CATSPER4 (ENSPTRG00000000377) #36	CEP85 (ENSPTRG00000000378)
Bonobo	MODERN SPECIES		ENSPPAG00000040945	GRHL3 (ENSPPAG00000027717)	STPG1 (ENSPPAG00000013443) #7	NIPAL3 (ENSPPAG00000034282) #8	RCAN3 (ENSPPAG00000030742) #9	NCMAP (ENSPPAG00000042429) #10	SRRM1 (ENSPPAG00000043918) #11	CLIC4 (ENSPPAG00000035372) #12	RUNX3 (ENSPPAG00000034809) #13	SYF2 (ENSPPAG00000036579) #14	ENSPPAG00000030483 #15	MACO1 (ENSPPAG00000042632) #18	LDLRAP1 (ENSPPAG00000026018) #19	MAN1C1 (ENSPPAG00000038533) #20	SELENON (ENSPPAG00000032038) #21	MTFR1L (ENSPPAG00000030443) #22	AUNIP (ENSPPAG00000031994) #23	PAQR7 (ENSPPAG00000011586) #24	ENSPPAG00000038785 #25	PAFAH2 (ENSPPAG00000033860) #26	EXTL1 (ENSPPAG00000018172) #27	SLC30A2 (ENSPPAG00000036676) #28	TRIM63 (ENSPPAG00000042727) #29	PDIK1L (ENSPPAG00000019009) #30	C1orf232 (ENSPPAG00000031691) #32	ZNF593 (ENSPPAG00000030063) #34	ZNF593OS (ENSPPAG00000038226) #33	CNKSR1 (ENSPPAG00000042812) #35	CATSPER4 (ENSPPAG00000001651) #36	CEP85 (ENSPPAG00000035844)	UBXN11 (ENSPPAG00000031858)
Human	MODERN SPECIES		NIPAL3 (ENSG00000001461) #8	RCAN3 (ENSG00000117602) #9	NCMAP (ENSG00000184454) #10	SRRM1 (ENSG00000133226) #11	CLIC4 (ENSG00000169504) #12	RUNX3 (ENSG00000020633) #13	SYF2 (ENSG00000117614) #14	RSRP1 (ENSG00000117616) #15	RHD (ENSG00000187010) #17	TMEM50A (ENSG00000183726) #16	RHCE (ENSG00000188672) #17	MACO1 (ENSG00000204178) #18	LDLRAP1 (ENSG00000157978) #19	MAN1C1 (ENSG00000117643) #20	SELENON (ENSG00000162430) #21	MTFR1L (ENSG00000117640) #22	AUNIP (ENSG00000127423) #23	PAQR7 (ENSG00000182749) #24	STMN1 (ENSG00000117632) #25	PAFAH2 (ENSG00000158006) #26	EXTL1 (ENSG00000158008) #27	SLC30A2 (ENSG00000158014) #28	TRIM63 (ENSG00000158022) #29	PDIK1L (ENSG00000175087) #30	FAM110D (ENSG00000197245) #31	C1orf232 (ENSG00000282872) #32	ZNF593OS (ENSG00000236782) #33	ZNF593 (ENSG00000142684) #34	CNKSR1 (ENSG00000142675) #35	CATSPER4 (ENSG00000188782) #36	CEP85 (ENSG00000130695)
Gorilla	MODERN SPECIES		NCMAP (ENSGGOG00000012056) #10	SRRM1 (ENSGGOG00000005209) #11	CLIC4 (ENSGGOG00000005586) #12	RUNX3 (ENSGGOG00000004848) #13	SYF2 (ENSGGOG00000012796) #14	RSRP1 (ENSGGOG00000005343) #15	ENSGGOG00000017174 #17	TMEM50A (ENSGGOG00000012216) #16	ENSGGOG00000039842 #17	ENSGGOG00000024581	ENSGGOG00000043956	MACO1 (ENSGGOG00000007844) #18	LDLRAP1 (ENSGGOG00000007769) #19	MAN1C1 (ENSGGOG00000011458) #20	SELENON (ENSGGOG00000011465) #21	MTFR1L (ENSGGOG00000011477) #22	AUNIP (ENSGGOG00000022255) #23	PAQR7 (ENSGGOG00000036561) #24	ENSGGOG00000026648 #25	PAFAH2 (ENSGGOG00000014258) #26	EXTL1 (ENSGGOG00000016393) #27	SLC30A2 (ENSGGOG00000016407) #28	TRIM63 (ENSGGOG00000016421) #29	PDIK1L (ENSGGOG00000003927) #30	FAM110D (ENSGGOG00000006570) #31	C1orf232 (ENSGGOG00000038054) #32	ZNF593 (ENSGGOG00000006573) #34	ZNF593OS (ENSGGOG00000040551) #33	CNKSR1 (ENSGGOG00000006575) #35	CATSPER4 (ENSGGOG00000006584) #36	CEP85 (ENSGGOG00000000605)
Orangutan	MODERN SPECIES		STPG1 (ENSPPYG00000001720) #7	NIPAL3 (ENSPPYG00000001719) #8	RCAN3 (ENSPPYG00000001718) #9	NCMAP (ENSPPYG00000001717) #10	SRRM1 (ENSPPYG00000001716) #11	CLIC4 (ENSPPYG00000001715) #12	RUNX3 (ENSPPYG00000001714) #13	SYF2 (ENSPPYG00000001713) #14	RSRP1 (ENSPPYG00000001712) #15	TMEM50A (ENSPPYG00000001711) #16	ENSPPYG00000001710 #17	MACO1 (ENSPPYG00000001709) #18	LDLRAP1 (ENSPPYG00000001708) #19	MAN1C1 (ENSPPYG00000001707) #20	SELENON (ENSPPYG00000001706) #21	MTFR1L (ENSPPYG00000001704) #22	ENSPPYG00000001703 #23	PAQR7 (ENSPPYG00000001702) #24	ENSPPYG00000001700 #25	PAFAH2 (ENSPPYG00000001699) #26	EXTL1 (ENSPPYG00000001698) #27	SLC30A2 (ENSPPYG00000001697) #28	TRIM63 (ENSPPYG00000001696) #29	PDIK1L (ENSPPYG00000035248) #30	FAM110D (ENSPPYG00000001694) #31	C1orf232 (ENSPPYG00000031495) #32	ZNF593 (ENSPPYG00000001693) #34	ZNF593OS (ENSPPYG00000031753) #33	CNKSR1 (ENSPPYG00000001692) #35	CATSPER4 (ENSPPYG00000001691) #36	ENSPPYG00000008742
Gibbon	MODERN SPECIES	16	STPG1 (ENSNLEG00000008905) #7	NIPAL3 (ENSNLEG00000008932) #8	RCAN3 (ENSNLEG00000008954) #9	NCMAP (ENSNLEG00000029897) #10	SRRM1 (ENSNLEG00000008966) #11	CLIC4 (ENSNLEG00000008997) #12	ENSNLEG00000027779 #13	SYF2 (ENSNLEG00000035185) #14	RSRP1 (ENSNLEG00000009046) #15	TMEM50A (ENSNLEG00000009061) #16	ENSNLEG00000009072 #17	MACO1 (ENSNLEG00000009076) #18	ENSNLEG00000009087 #19	MAN1C1 (ENSNLEG00000009094) #20	ENSNLEG00000032231 #21	MTFR1L (ENSNLEG00000009129) #22	AUNIP (ENSNLEG00000009148) #23	ENSNLEG00000009154 #25	PAFAH2 (ENSNLEG00000009179) #26	EXTL1 (ENSNLEG00000009153) #27	SLC30A2 (ENSNLEG00000009172) #28	TRIM63 (ENSNLEG00000009190) #29	PDIK1L (ENSNLEG00000009194) #30	FAM110D (ENSNLEG00000018581) #31	C1orf232 (ENSNLEG00000028850) #32	ENSNLEG00000009197 #34	ZNF593OS (ENSNLEG00000036031) #33	ENSNLEG00000009212 #35	CATSPER4 (ENSNLEG00000009219) #36	CEP85 (ENSNLEG00000009229)	ENSNLEG00000035804
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00940000158233 #8	ENSGT01100000267028	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00550000074801.h.c.a.a.a	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000153877.h.b.e.a	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00940000158233 #8	ENSGT01100000267028	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00550000074801.h.c.a.a.a	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000153877.h.b.e.a	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35
Vervet Monkey	MODERN SPECIES	12	RCAN3 (ENSCSAG00000000943) #9	NCMAP (ENSCSAG00000000944) #10	SRRM1 (ENSCSAG00000000945) #11	CLIC4 (ENSCSAG00000000946) #12	RUNX3 (ENSCSAG00000000947) #13	ENSCSAG00000000645	SYF2 (ENSCSAG00000000948) #14	RSRP1 (ENSCSAG00000000949) #15	TMEM50A (ENSCSAG00000000950) #16	ENSCSAG00000000951 #17	MACO1 (ENSCSAG00000000952) #18	LDLRAP1 (ENSCSAG00000000953) #19	MAN1C1 (ENSCSAG00000000954) #20	ENSCSAG00000000955 #21	ENSCSAG00000000956 #21	MTFR1L (ENSCSAG00000000958) #22	AUNIP (ENSCSAG00000000959) #23	PAQR7 (ENSCSAG00000000646) #24	STMN1 (ENSCSAG00000000960) #25	PAFAH2 (ENSCSAG00000000961) #26	EXTL1 (ENSCSAG00000000962) #27	SLC30A2 (ENSCSAG00000000963) #28	TRIM63 (ENSCSAG00000000964) #29	ENSCSAG00000000647	PDIK1L (ENSCSAG00000000965) #30	FAM110D (ENSCSAG00000000648) #31	ZNF593 (ENSCSAG00000000966) #34	CNKSR1 (ENSCSAG00000000967) #35	CATSPER4 (ENSCSAG00000000968) #36	CEP85 (ENSCSAG00000000969)	SH3BGRL3 (ENSCSAG00000000970)
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000158233 #8	ENSGT01100000267028	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00550000074801.h.c.a.a.a	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000153877.h.b.e.a	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173.e #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35
Macaca	ANCESTRAL SPECIES		ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00550000074801.h.c.a.a.a	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173.e #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000161621.A.a.b.b.b.a.a.a.a	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173.e #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Rhesus	MODERN SPECIES		NCMAP (ENSMMUG00000057675) #10	SRRM1 (ENSMMUG00000006645) #11	CLIC4 (ENSMMUG00000002416) #12	RUNX3 (ENSMMUG00000002420) #13	ENSMMUG00000057953	SYF2 (ENSMMUG00000002968) #14	RSRP1 (ENSMMUG00000002970) #15	TMEM50A (ENSMMUG00000032217) #16	RHCE (ENSMMUG00000011156) #17	MACO1 (ENSMMUG00000018014) #18	LDLRAP1 (ENSMMUG00000051142) #19	ENSMMUG00000063601	ENSMMUG00000050620	ENSMMUG00000057092	MAN1C1 (ENSMMUG00000004788) #20	MTFR1L (ENSMMUG00000007854) #22	AUNIP (ENSMMUG00000007856) #23	PAQR7 (ENSMMUG00000007857) #24	STMN1 (ENSMMUG00000000653) #25	PAFAH2 (ENSMMUG00000000655) #26	EXTL1 (ENSMMUG00000061744) #27	SLC30A2 (ENSMMUG00000012328) #28	TRIM63 (ENSMMUG00000009452) #29	PDIK1L (ENSMMUG00000016874) #30	FAM110D (ENSMMUG00000045223) #31	C1H1orf232 (ENSMMUG00000039194) #32	ZNF593 (ENSMMUG00000004682) #34	ZNF593OS (ENSMMUG00000040742) #33	CNKSR1 (ENSMMUG00000032214) #35	CATSPER4 (ENSMMUG00000032213) #36	CEP85 (ENSMMUG00000000644)
Crab-eating macaque	MODERN SPECIES		NCMAP (ENSMFAG00000060484) #10	SRRM1 (ENSMFAG00000025726) #11	CLIC4 (ENSMFAG00000038789) #12	RUNX3 (ENSMFAG00000031725) #13	ENSMFAG00000052857	ENSMFAG00000062275	SYF2 (ENSMFAG00000041831) #14	RSRP1 (ENSMFAG00000003728) #15	TMEM50A (ENSMFAG00000033857) #16	ENSMFAG00000042317 #17	MACO1 (ENSMFAG00000035460) #18	LDLRAP1 (ENSMFAG00000065124) #19	ENSMFAG00000051195	MAN1C1 (ENSMFAG00000034191) #20	SELENON (ENSMFAG00000036435) #21	MTFR1L (ENSMFAG00000037554) #22	AUNIP (ENSMFAG00000041647) #23	PAQR7 (ENSMFAG00000029286) #24	STMN1 (ENSMFAG00000041588) #25	PAFAH2 (ENSMFAG00000037812) #26	EXTL1 (ENSMFAG00000031631) #27	SLC30A2 (ENSMFAG00000003156) #28	TRIM63 (ENSMFAG00000031920) #29	ENSMFAG00000047711	ENSMFAG00000045055	PDIK1L (ENSMFAG00000056115) #30	FAM110D (ENSMFAG00000053623) #31	C1orf232 (ENSMFAG00000023073) #32	ZNF593OS (ENSMFAG00000036124) #33	CATSPER4 (ENSMFAG00000037726) #36	CEP85 (ENSMFAG00000045288)
Pig-tailed macaque	MODERN SPECIES	217	STPG1 (ENSMNEG00000028123) #7	NIPAL3 (ENSMNEG00000043454) #8	RCAN3 (ENSMNEG00000045388) #9	NCMAP (ENSMNEG00000020288) #10	SRRM1 (ENSMNEG00000039415) #11	CLIC4 (ENSMNEG00000032964) #12	RUNX3 (ENSMNEG00000038114) #13	SYF2 (ENSMNEG00000030180) #14	RSRP1 (ENSMNEG00000031088) #15	TMEM50A (ENSMNEG00000028657) #16	ENSMNEG00000039154 #17	MACO1 (ENSMNEG00000031369) #18	LDLRAP1 (ENSMNEG00000027678) #19	MAN1C1 (ENSMNEG00000042958) #20	SELENON (ENSMNEG00000042835) #21	MTFR1L (ENSMNEG00000033505) #22	AUNIP (ENSMNEG00000029426) #23	STMN1 (ENSMNEG00000044643) #25	ENSMNEG00000027940	PAFAH2 (ENSMNEG00000023207) #26	ENSMNEG00000033165	EXTL1 (ENSMNEG00000040210) #27	SLC30A2 (ENSMNEG00000034096) #28	TRIM63 (ENSMNEG00000031015) #29	PDIK1L (ENSMNEG00000027529) #30	FAM110D (ENSMNEG00000021863) #31	C1orf232 (ENSMNEG00000035214) #32	ZNF593 (ENSMNEG00000028267) #34	ZNF593OS (ENSMNEG00000028433) #33	CNKSR1 (ENSMNEG00000030464) #35	CATSPER4 (ENSMNEG00000031338) #36
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00940000158233 #8	ENSGT01100000267028	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00550000074801.h.c.a.a.a	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000153877.h.b.e.a	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173.e #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35
Olive baboon	MODERN SPECIES		NCMAP (ENSPANG00000033614) #10	SRRM1 (ENSPANG00000010194) #11	CLIC4 (ENSPANG00000023168) #12	ENSPANG00000040050	RUNX3 (ENSPANG00000008140) #13	ENSPANG00000044753	SYF2 (ENSPANG00000008139) #14	RSRP1 (ENSPANG00000008896) #15	TMEM50A (ENSPANG00000005864) #16	ENSPANG00000010026 #17	MACO1 (ENSPANG00000000594) #18	LDLRAP1 (ENSPANG00000012319) #19	MAN1C1 (ENSPANG00000009808) #20	ENSPANG00000020847 #21	ENSPANG00000038573 #21	MTFR1L (ENSPANG00000005970) #22	AUNIP (ENSPANG00000008189) #23	PAQR7 (ENSPANG00000001704) #24	ENSPANG00000010315 #25	PAFAH2 (ENSPANG00000005746) #26	EXTL1 (ENSPANG00000001282) #27	SLC30A2 (ENSPANG00000020224) #28	TRIM63 (ENSPANG00000005628) #29	ENSPANG00000037235	PDIK1L (ENSPANG00000038583) #30	FAM110D (ENSPANG00000011846) #31	C1orf232 (ENSPANG00000034733) #32	CNKSR1 (ENSPANG00000020223) #35	ZNF593OS (ENSPANG00000035590) #33	CATSPER4 (ENSPANG00000012398) #36	CEP85 (ENSPANG00000008187)
Cercopithecinae_d	ANCESTRAL SPECIES	1	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00550000074801.h.c.a.a.a	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000153877.h.b.e.a	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173.e #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35
Drill	MODERN SPECIES	832														ENSMLEG00000032579 #20	SELENON (ENSMLEG00000034234) #21	MTFR1L (ENSMLEG00000034120) #22	AUNIP (ENSMLEG00000012674) #23	PAQR7 (ENSMLEG00000007552) #24	STMN1 (ENSMLEG00000037590) #25	PAFAH2 (ENSMLEG00000031312) #26	ENSMLEG00000035525	EXTL1 (ENSMLEG00000033341) #27	SLC30A2 (ENSMLEG00000043962) #28	TRIM63 (ENSMLEG00000015573) #29	ENSMLEG00000015659	PDIK1L (ENSMLEG00000026898) #30	FAM110D (ENSMLEG00000001627) #31	C1orf232 (ENSMLEG00000000238) #32	ZNF593 (ENSMLEG00000035715) #34	ZNF593OS (ENSMLEG00000031396) #33	CNKSR1 (ENSMLEG00000044411) #35
Sooty mangabey	MODERN SPECIES	227	STPG1 (ENSCATG00000030007) #7	NIPAL3 (ENSCATG00000019829) #8	RCAN3 (ENSCATG00000033944) #9	NCMAP (ENSCATG00000017154) #10	SRRM1 (ENSCATG00000031303) #11	CLIC4 (ENSCATG00000033748) #12	RUNX3 (ENSCATG00000016885) #13	SYF2 (ENSCATG00000026917) #14	RSRP1 (ENSCATG00000033666) #15	TMEM50A (ENSCATG00000016342) #16	ENSCATG00000021309 #17	MACO1 (ENSCATG00000033846) #18	LDLRAP1 (ENSCATG00000029730) #19	MAN1C1 (ENSCATG00000031483) #20	SELENON (ENSCATG00000015472) #21	MTFR1L (ENSCATG00000020697) #22	AUNIP (ENSCATG00000019786) #23	PAQR7 (ENSCATG00000005096) #24	ENSCATG00000006529	STMN1 (ENSCATG00000016402) #25	ENSCATG00000021682	PAFAH2 (ENSCATG00000044651) #26	EXTL1 (ENSCATG00000020905) #27	SLC30A2 (ENSCATG00000029914) #28	TRIM63 (ENSCATG00000033673) #29	ENSCATG00000005627	PDIK1L (ENSCATG00000021131) #30	FAM110D (ENSCATG00000004972) #31	C1orf232 (ENSCATG00000031422) #32	ZNF593OS (ENSCATG00000044572) #33	ENSCATG00000015417 #34
Rhinopithecus	ANCESTRAL SPECIES	80	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.k #11	ENSGT00940000155017.y.b #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.cb #25	ENSGT00390000005233.a #26	ENSGT00550000074801.h.c.a.a.a	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000153877.h.b.e.a	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35
Black snub-nosed monkey	MODERN SPECIES	1838		ENSRBIG00000037418	ENSRBIG00000026158	AKIRIN1 (ENSRBIG00000044113)	RHBDL2 (ENSRBIG00000042643)	GJA9 (ENSRBIG00000033240)	ENSRBIG00000034270	RRAGC (ENSRBIG00000019580)	ENSRBIG00000002054	TMEM50A (ENSRBIG00000031357) #16	ENSRBIG00000037336 #17	MACO1 (ENSRBIG00000040448) #18	LDLRAP1 (ENSRBIG00000031475) #19	MAN1C1 (ENSRBIG00000040110) #20	SELENON (ENSRBIG00000031791) #21	MTFR1L (ENSRBIG00000033890) #22	AUNIP (ENSRBIG00000042883) #23	PAQR7 (ENSRBIG00000013869) #24	STMN1 (ENSRBIG00000033291) #25	PAFAH2 (ENSRBIG00000043154) #26	ENSRBIG00000044988	EXTL1 (ENSRBIG00000035630) #27	SLC30A2 (ENSRBIG00000031643) #28	TRIM63 (ENSRBIG00000033288) #29	PDIK1L (ENSRBIG00000042161) #30	ENSRBIG00000040168	FAM110D (ENSRBIG00000017230) #31	C1orf232 (ENSRBIG00000043678) #32	ZNF593 (ENSRBIG00000042051) #34	ZNF593OS (ENSRBIG00000039724) #33	CNKSR1 (ENSRBIG00000031952) #35
Golden snub-nosed monkey	MODERN SPECIES	3019	STPG1 (ENSRROG00000038964) #7	NIPAL3 (ENSRROG00000041947) #8	RCAN3 (ENSRROG00000032065) #9	NCMAP (ENSRROG00000045275) #10	SRRM1 (ENSRROG00000035151) #11	CLIC4 (ENSRROG00000013652) #12	RUNX3 (ENSRROG00000039320) #13	SYF2 (ENSRROG00000001347) #14	RSRP1 (ENSRROG00000037704) #15	TMEM50A (ENSRROG00000037442) #16	ENSRROG00000036964 #17	MACO1 (ENSRROG00000044580) #18	LDLRAP1 (ENSRROG00000041057) #19	MAN1C1 (ENSRROG00000033568) #20	SELENON (ENSRROG00000045479) #21	MTFR1L (ENSRROG00000034190) #22	AUNIP (ENSRROG00000040327) #23	PAQR7 (ENSRROG00000016432) #24	ENSRROG00000041015 #25	ENSRROG00000028419	PAFAH2 (ENSRROG00000044148) #26	EXTL1 (ENSRROG00000041355) #27	SLC30A2 (ENSRROG00000036207) #28	TRIM63 (ENSRROG00000041155) #29	ENSRROG00000039756	PDIK1L (ENSRROG00000029448) #30	FAM110D (ENSRROG00000018774) #31	C1orf232 (ENSRROG00000045362) #32	ZNF593 (ENSRROG00000042522) #34	ZNF593OS (ENSRROG00000044096) #33	CNKSR1 (ENSRROG00000029711) #35
Tarsier	MODERN SPECIES	7079						SYF2 (ENSTSYG00000005114) #14	ENSTSYG00000000127	ENSTSYG00000035341	RSRP1 (ENSTSYG00000027816) #15	TMEM50A (ENSTSYG00000013180) #16	RHCE (ENSTSYG00000032101) #17	MACO1 (ENSTSYG00000006941) #18	LDLRAP1 (ENSTSYG00000029173) #19	MAN1C1 (ENSTSYG00000003612) #20	SELENON (ENSTSYG00000034832) #21	MTFR1L (ENSTSYG00000010567) #22	AUNIP (ENSTSYG00000010522) #23	ENSTSYG00000033334 #25
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Lemuriformes	ANCESTRAL SPECIES		ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Lemuriformes_a	ANCESTRAL SPECIES	7	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Coquerels sifaka	MODERN SPECIES	344								SYF2 (ENSPCOG00000027011) #14	RSRP1 (ENSPCOG00000027589) #15	TMEM50A (ENSPCOG00000014672) #16	ENSPCOG00000020041 #17	ENSPCOG00000025096 #18	LDLRAP1 (ENSPCOG00000021963) #19	MAN1C1 (ENSPCOG00000007948) #20	SELENON (ENSPCOG00000018876) #21	MTFR1L (ENSPCOG00000028193) #22	AUNIP (ENSPCOG00000028669) #23	STMN1 (ENSPCOG00000028510) #25	PAFAH2 (ENSPCOG00000020440) #26	EXTL1 (ENSPCOG00000015388) #27	SLC30A2 (ENSPCOG00000004640) #28	TRIM63 (ENSPCOG00000014576) #29	PDIK1L (ENSPCOG00000023798) #30	C1orf232 (ENSPCOG00000023815) #32	ZNF593 (ENSPCOG00000016991) #34	ZNF593OS (ENSPCOG00000015503) #33	CNKSR1 (ENSPCOG00000017432) #35	CATSPER4 (ENSPCOG00000014567) #36	CEP85 (ENSPCOG00000024406)	SH3BGRL3 (ENSPCOG00000028848)	UBXN11 (ENSPCOG00000027060)
Greater bamboo lemur	MODERN SPECIES	278	STPG1 (ENSPSMG00000013046) #7	NIPAL3 (ENSPSMG00000013021) #8	RCAN3 (ENSPSMG00000012990) #9	NCMAP (ENSPSMG00000012955) #10	SRRM1 (ENSPSMG00000012843) #11	CLIC4 (ENSPSMG00000012750) #12	RUNX3 (ENSPSMG00000012742) #13	SYF2 (ENSPSMG00000012731) #14	RSRP1 (ENSPSMG00000012723) #15	TMEM50A (ENSPSMG00000012713) #16	ENSPSMG00000012560 #17	MACO1 (ENSPSMG00000012398) #18	LDLRAP1 (ENSPSMG00000012341) #19	MAN1C1 (ENSPSMG00000012288) #20	SELENON (ENSPSMG00000012249) #21	MTFR1L (ENSPSMG00000012241) #22	AUNIP (ENSPSMG00000012224) #23	PAQR7 (ENSPSMG00000012218) #24	STMN1 (ENSPSMG00000012209) #25	PAFAH2 (ENSPSMG00000012192) #26	EXTL1 (ENSPSMG00000012157) #27	SLC30A2 (ENSPSMG00000012106) #28	TRIM63 (ENSPSMG00000012090) #29	PDIK1L (ENSPSMG00000012069) #30	FAM110D (ENSPSMG00000012062) #31	C1orf232 (ENSPSMG00000012059) #32	ZNF593 (ENSPSMG00000012054) #34	ZNF593OS (ENSPSMG00000012045) #33	CNKSR1 (ENSPSMG00000012038) #35	CATSPER4 (ENSPSMG00000012015) #36	CEP85 (ENSPSMG00000012003)
Mouse lemur	MODERN SPECIES	11	NIPAL3 (ENSMICG00000034277) #8	RCAN3 (ENSMICG00000038019) #9	ENSMICG00000006550	SRRM1 (ENSMICG00000006553) #11	CLIC4 (ENSMICG00000038442) #12	RUNX3 (ENSMICG00000035257) #13	SYF2 (ENSMICG00000016191) #14	RSRP1 (ENSMICG00000016214) #15	TMEM50A (ENSMICG00000016225) #16	ENSMICG00000016235 #17	MACO1 (ENSMICG00000016248) #18	LDLRAP1 (ENSMICG00000047758) #19	MAN1C1 (ENSMICG00000012135) #20	ENSMICG00000012147 #21	ENSMICG00000035407 #21	MTFR1L (ENSMICG00000012175) #22	ENSMICG00000001965	AUNIP (ENSMICG00000028919) #23	STMN1 (ENSMICG00000010225) #25	PAFAH2 (ENSMICG00000042351) #26	EXTL1 (ENSMICG00000046663) #27	SLC30A2 (ENSMICG00000000185) #28	TRIM63 (ENSMICG00000000187) #29	ENSMICG00000033845 #30	C1orf232 (ENSMICG00000034667) #32	ZNF593 (ENSMICG00000017472) #34	ZNF593OS (ENSMICG00000034234) #33	CNKSR1 (ENSMICG00000017473) #35	CATSPER4 (ENSMICG00000030540) #36	CEP85 (ENSMICG00000010799)	SH3BGRL3 (ENSMICG00000028911)
Bushbaby	MODERN SPECIES	271	RCAN3 (ENSOGAG00000015460) #9	NCMAP (ENSOGAG00000008361) #10	SRRM1 (ENSOGAG00000010210) #11	ENSOGAG00000030641	ENSOGAG00000025062	CLIC4 (ENSOGAG00000014620) #12	RUNX3 (ENSOGAG00000025633) #13	SYF2 (ENSOGAG00000009962) #14	RSRP1 (ENSOGAG00000011942) #15	TMEM50A (ENSOGAG00000028512) #16	ENSOGAG00000011983 #17	MACO1 (ENSOGAG00000033230) #18	LDLRAP1 (ENSOGAG00000002101) #19	MAN1C1 (ENSOGAG00000002102) #20	ENSOGAG00000024972 #21	MTFR1L (ENSOGAG00000002104) #22	AUNIP (ENSOGAG00000034108) #23	PAQR7 (ENSOGAG00000024814) #24	STMN1 (ENSOGAG00000002109) #25	PAFAH2 (ENSOGAG00000000574) #26	EXTL1 (ENSOGAG00000000575) #27	SLC30A2 (ENSOGAG00000000578) #28	TRIM63 (ENSOGAG00000000579) #29	PDIK1L (ENSOGAG00000000581) #30	FAM110D (ENSOGAG00000025998) #31	ZNF593 (ENSOGAG00000016334) #34	ENSOGAG00000016335 #35	CATSPER4 (ENSOGAG00000025849) #36	ENSOGAG00000028233 #37	CEP85 (ENSOGAG00000016340)	ENSOGAG00000027036
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Carnivora	ANCESTRAL SPECIES	1	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.i.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Caniformia	ANCESTRAL SPECIES	2	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.i.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.i.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Mustelinae	ANCESTRAL SPECIES		ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.i.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Ferret	MODERN SPECIES	167	NIPAL3 (ENSMPUG00000015837) #8	RCAN3 (ENSMPUG00000015835) #9	NCMAP (ENSMPUG00000015833) #10	ENSMPUG00000015831 #11	ENSMPUG00000015830 #11	CLIC4 (ENSMPUG00000015829) #12	RUNX3 (ENSMPUG00000015804) #13	ENSMPUG00000015802 #14	ENSMPUG00000015801 #14	RSRP1 (ENSMPUG00000015796) #15	ENSMPUG00000015794 #16	ENSMPUG00000015793 #17	MACO1 (ENSMPUG00000015792) #18	LDLRAP1 (ENSMPUG00000015779) #19	MAN1C1 (ENSMPUG00000015777) #20	MTFR1L (ENSMPUG00000015776) #22	AUNIP (ENSMPUG00000015775) #23	PAQR7 (ENSMPUG00000018819) #24	STMN1 (ENSMPUG00000015774) #25	PAFAH2 (ENSMPUG00000015773) #26	EXTL1 (ENSMPUG00000015772) #27	SLC30A2 (ENSMPUG00000015771) #28	TRIM63 (ENSMPUG00000015770) #29	PDIK1L (ENSMPUG00000015769) #30	FAM110D (ENSMPUG00000015764) #31	CNKSR1 (ENSMPUG00000015762) #35	CATSPER4 (ENSMPUG00000015760) #36	CEP85 (ENSMPUG00000015744)	SH3BGRL3 (ENSMPUG00000015740)	UBXN11 (ENSMPUG00000015736)	CRYBG2 (ENSMPUG00000015728)
American mink	MODERN SPECIES	9	NIPAL3 (ENSNVIG00000023120) #8	RCAN3 (ENSNVIG00000023123) #9	CA130 (ENSNVIG00000023144) #10	SRRM1 (ENSNVIG00000023151) #11	CLIC4 (ENSNVIG00000023177) #12	RUNX3 (ENSNVIG00000023179) #13	ENSNVIG00000023193 #14	ENSNVIG00000023198 #14	ENSNVIG00000023204	ENSNVIG00000023207 #16	ENSNVIG00000023223 #17	MACO1 (ENSNVIG00000023540) #18	LDLRAP1 (ENSNVIG00000023545) #19	MAN1C1 (ENSNVIG00000023546) #20	SELENON (ENSNVIG00000023550) #21	FA54B (ENSNVIG00000023557) #22	AUNIP (ENSNVIG00000023565) #23	PAQR7 (ENSNVIG00000023568) #24	STMN1 (ENSNVIG00000023571) #25	PAFA2 (ENSNVIG00000023575) #26	EXTL1 (ENSNVIG00000023579) #27	SLC30A2 (ENSNVIG00000023582) #28	TRIM63 (ENSNVIG00000023587) #29	PDK1L (ENSNVIG00000023591) #30	FAM110D (ENSNVIG00000023596) #31	C1orf232 (ENSNVIG00000023599) #32	ZNF593 (ENSNVIG00000023603) #34	ZNF593OS (ENSNVIG00000023604) #33	CNKSR1 (ENSNVIG00000023607) #35	CATSPER4 (ENSNVIG00000023629) #36	CEP85 (ENSNVIG00000023633)
Ursidae	ANCESTRAL SPECIES		ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.i.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Ursus	ANCESTRAL SPECIES		ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.i.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b	ENSGT00940000157260.f	ENSGT00520000055567.b
Polar bear	MODERN SPECIES	189	GRHL3 (ENSUMAG00000013146)	STPG1 (ENSUMAG00000013144) #7	NIPAL3 (ENSUMAG00000013130) #8	RCAN3 (ENSUMAG00000013127) #9	NCMAP (ENSUMAG00000013124) #10	SRRM1 (ENSUMAG00000013121) #11	CLIC4 (ENSUMAG00000013116) #12	ENSUMAG00000013115 #13	SYF2 (ENSUMAG00000013108) #14	TMEM50A (ENSUMAG00000013098) #16	ENSUMAG00000013091 #17	MACO1 (ENSUMAG00000013072) #18	LDLRAP1 (ENSUMAG00000013068) #19	MAN1C1 (ENSUMAG00000012846) #20	ENSUMAG00000012822 #21	MTFR1L (ENSUMAG00000012819) #22	AUNIP (ENSUMAG00000012816) #23	PAQR7 (ENSUMAG00000012813) #24	STMN1 (ENSUMAG00000012809) #25	PAFAH2 (ENSUMAG00000012805) #26	EXTL1 (ENSUMAG00000012796) #27	SLC30A2 (ENSUMAG00000012772) #28	TRIM63 (ENSUMAG00000012762) #29	PDIK1L (ENSUMAG00000012756) #30	ZNF593 (ENSUMAG00000012751) #34	ZNF593OS (ENSUMAG00000012749) #33	CNKSR1 (ENSUMAG00000012697) #35	CATSPER4 (ENSUMAG00000012684) #36	CEP85 (ENSUMAG00000012677)	ENSUMAG00000012675	UBXN11 (ENSUMAG00000012668)
American black bear	MODERN SPECIES	448								RSRP1 (ENSUAMG00000025691) #15	TMEM50A (ENSUAMG00000025692) #16	ENSUAMG00000025694 #17	MACO1 (ENSUAMG00000025696) #18	LDLRAP1 (ENSUAMG00000025699) #19	MAN1C1 (ENSUAMG00000025702) #20	ENSUAMG00000025706 #21	ENSUAMG00000025707 #21	MTFR1L (ENSUAMG00000025710) #22	AUNIP (ENSUAMG00000025717) #23	PAQR7 (ENSUAMG00000025719) #24	STMN1 (ENSUAMG00000025721) #25	PAFAH2 (ENSUAMG00000025725) #26
Giant Panda	MODERN SPECIES	11	NIPAL3 (ENSAMEG00000010038) #8	RCAN3 (ENSAMEG00000010061) #9	NCMAP (ENSAMEG00000030328) #10	SRRM1 (ENSAMEG00000010075) #11	CLIC4 (ENSAMEG00000010080) #12	RUNX3 (ENSAMEG00000024625) #13	ENSAMEG00000010115 #14	ENSAMEG00000030094 #14	RSRP1 (ENSAMEG00000030675) #15	TMEM50A (ENSAMEG00000010163) #16	ENSAMEG00000010178 #17	MACO1 (ENSAMEG00000010212) #18	LDLRAP1 (ENSAMEG00000010238) #19	MAN1C1 (ENSAMEG00000010263) #20	SELENON (ENSAMEG00000010280) #21	MTFR1L (ENSAMEG00000010285) #22	AUNIP (ENSAMEG00000010293) #23	PAQR7 (ENSAMEG00000020206) #24	STMN1 (ENSAMEG00000010298) #25	PAFAH2 (ENSAMEG00000010303) #26	EXTL1 (ENSAMEG00000010336) #27	SLC30A2 (ENSAMEG00000010366) #28	TRIM63 (ENSAMEG00000010380) #29	PDIK1L (ENSAMEG00000010409) #30	FAM110D (ENSAMEG00000029607) #31	C1orf232 (ENSAMEG00000025712) #32	ZNF593 (ENSAMEG00000010410) #34	ZNF593OS (ENSAMEG00000030099) #33	CNKSR1 (ENSAMEG00000010424) #35	CATSPER4 (ENSAMEG00000010495) #36	CEP85 (ENSAMEG00000010512)
Canidae	ANCESTRAL SPECIES	14	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.i.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.i.b.c #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Dog	MODERN SPECIES	11	STPG1 (ENSCAFG00845014384) #7	NIPAL3 (ENSCAFG00845014315) #8	RCAN3 (ENSCAFG00845014238) #9	SRRM1 (ENSCAFG00845014121) #11	CLIC4 (ENSCAFG00845014085) #12	RUNX3 (ENSCAFG00845014056) #13	ENSCAFG00845014028 #14	ENSCAFG00845014016 #14	RSRP1 (ENSCAFG00845013985) #15	TMEM50A (ENSCAFG00845013963) #16	RHCE (ENSCAFG00845013884) #17	MACO1 (ENSCAFG00845013803) #18	LDLRAP1 (ENSCAFG00845013761) #19	MAN1C1 (ENSCAFG00845013691) #20	SELENON (ENSCAFG00845013639) #21	MTFR1L (ENSCAFG00845013602) #22	AUNIP (ENSCAFG00845013577) #23	PAQR7 (ENSCAFG00845013560) #24	STMN1 (ENSCAFG00845013518) #25	PAFAH2 (ENSCAFG00845013358) #26	EXTL1 (ENSCAFG00845013300) #27	SLC30A2 (ENSCAFG00845013235) #28	TRIM63 (ENSCAFG00845013202) #29	PDIK1L (ENSCAFG00845013186) #30	FAM110D (ENSCAFG00845013168) #31	C1orf232 (ENSCAFG00845013142) #32	ZNF593OS (ENSCAFG00845013128) #33	CNKSR1 (ENSCAFG00845012989) #35	CATSPER4 (ENSCAFG00845012907) #36	CEP85 (ENSCAFG00845012766)	SH3BGRL3 (ENSCAFG00845012705)
Dingo	MODERN SPECIES	41	NIPAL3 (ENSCAFG00020020911) #8	RCAN3 (ENSCAFG00020020917) #9	NCMAP (ENSCAFG00020020923) #10	ENSCAFG00020020948 #11	CLIC4 (ENSCAFG00020021078) #12	RUNX3 (ENSCAFG00020021086) #13	ENSCAFG00020021091 #14	ENSCAFG00020021094 #14	RSRP1 (ENSCAFG00020021098) #15	TMEM50A (ENSCAFG00020021099) #16	ENSCAFG00020021106 #17	MACO1 (ENSCAFG00020021111) #18	LDLRAP1 (ENSCAFG00020021133) #19	MAN1C1 (ENSCAFG00020021157) #20	SELENON (ENSCAFG00020021164) #21	MTFR1L (ENSCAFG00020021179) #22	AUNIP (ENSCAFG00020021184) #23	PAQR7 (ENSCAFG00020021189) #24	STMN1 (ENSCAFG00020021191) #25	PAFAH2 (ENSCAFG00020021194) #26	EXTL1 (ENSCAFG00020021198) #27	SLC30A2 (ENSCAFG00020021202) #28	TRIM63 (ENSCAFG00020021209) #29	PDIK1L (ENSCAFG00020021219) #30	FAM110D (ENSCAFG00020021221) #31	ZNF593 (ENSCAFG00020021225) #34	ZNF593OS (ENSCAFG00020021229) #33	CNKSR1 (ENSCAFG00020021246) #35	CATSPER4 (ENSCAFG00020021333) #36	CEP85 (ENSCAFG00020021347)	UBXN11 (ENSCAFG00020021369)
Red fox	MODERN SPECIES	103													LDLRAP1 (ENSVVUG00000011450) #19	MAN1C1 (ENSVVUG00000011470) #20	SELENON (ENSVVUG00000011581) #21	MTFR1L (ENSVVUG00000011593) #22	AUNIP (ENSVVUG00000011600) #23	PAQR7 (ENSVVUG00000011609) #24	STMN1 (ENSVVUG00000011613) #25	PAFAH2 (ENSVVUG00000011617) #26	EXTL1 (ENSVVUG00000011633) #27	SLC30A2 (ENSVVUG00000011645) #28	TRIM63 (ENSVVUG00000011677) #29	PDIK1L (ENSVVUG00000011688) #30	FAM110D (ENSVVUG00000011692) #31	ZNF593 (ENSVVUG00000011698) #34	ZNF593OS (ENSVVUG00000011703) #33	CNKSR1 (ENSVVUG00000011710) #35	UBXN11 (ENSVVUG00000011721)	CATSPER4 (ENSVVUG00000011736) #36	CEP85 (ENSVVUG00000011746)
Felidae	ANCESTRAL SPECIES	18	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.i.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Panthera	ANCESTRAL SPECIES	4	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.i.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Panthera_a	ANCESTRAL SPECIES	14	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.i.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
leopard	MODERN SPECIES	37	NIPAL3 (ENSPPRG00000003415) #8	RCAN3 (ENSPPRG00000003225) #9	NCMAP (ENSPPRG00000002624) #10	SRRM1 (ENSPPRG00000002509) #11	CLIC4 (ENSPPRG00000002006) #12	RUNX3 (ENSPPRG00000001924) #13	ENSPPRG00000001651 #14	ENSPPRG00000001638 #14	RSRP1 (ENSPPRG00000001204) #15	TMEM50A (ENSPPRG00000000857) #16	ENSPPRG00000000586 #17	MACO1 (ENSPPRG00000000258) #18	LDLRAP1 (ENSPPRG00000000074) #19	MAN1C1 (ENSPPRG00000022702) #20	SELENON (ENSPPRG00000022102) #21	MTFR1L (ENSPPRG00000019260) #22	AUNIP (ENSPPRG00000017004) #23	PAQR7 (ENSPPRG00000021047) #24	STMN1 (ENSPPRG00000016135) #25	PAFAH2 (ENSPPRG00000014671) #26	ENSPPRG00000021008
lion	MODERN SPECIES	8	RCAN3 (ENSPLOG00000013806) #9	NCMAP (ENSPLOG00000013758) #10	ENSPLOG00000013665 #11	CLIC4 (ENSPLOG00000013602) #12	RUNX3 (ENSPLOG00000013543) #13	ENSPLOG00000013477 #14	ENSPLOG00000013438 #14	RSRP1 (ENSPLOG00000013415) #15	TMEM50A (ENSPLOG00000013372) #16	ENSPLOG00000013211 #17	MACO1 (ENSPLOG00000013097) #18	LDLRAP1 (ENSPLOG00000013029) #19	MAN1C1 (ENSPLOG00000012845) #20	SELENON (ENSPLOG00000012695) #21	AUNIP (ENSPLOG00000012594) #23	MTFR1L (ENSPLOG00000012537) #22	PAQR7 (ENSPLOG00000012514) #24	STMN1 (ENSPLOG00000012470) #25	PAFAH2 (ENSPLOG00000012425) #26	ENSPLOG00000012401	EXTL1 (ENSPLOG00000012288) #27	SLC30A2 (ENSPLOG00000012129) #28	TRIM63 (ENSPLOG00000012034) #29	PDIK1L (ENSPLOG00000011991) #30	FAM110D (ENSPLOG00000011975) #31	ENSPLOG00000011913 #32	ZNF593 (ENSPLOG00000011868) #34	ZNF593OS (ENSPLOG00000011833) #33	CNKSR1 (ENSPLOG00000011375) #35	CATSPER4 (ENSPLOG00000011265) #36	CEP85 (ENSPLOG00000011133)
Tiger	MODERN SPECIES	187	GRHL3 (ENSPTIG00000018353)	STPG1 (ENSPTIG00000016802) #7	NIPAL3 (ENSPTIG00000014687) #8	RCAN3 (ENSPTIG00000012025) #9	NCMAP (ENSPTIG00000011435) #10	ENSPTIG00000008778 #11	CLIC4 (ENSPTIG00000008083) #12	ENSPTIG00000007036 #14	ENSPTIG00000005711 #14	TMEM50A (ENSPTIG00000004884) #16	ENSPTIG00000015194 #17	MACO1 (ENSPTIG00000011078) #18	LDLRAP1 (ENSPTIG00000010439) #19	MAN1C1 (ENSPTIG00000005865) #20	SELENON (ENSPTIG00000022104) #21	MTFR1L (ENSPTIG00000021874) #22	AUNIP (ENSPTIG00000021670) #23	STMN1 (ENSPTIG00000020918) #25	ENSPTIG00000001971	PAFAH2 (ENSPTIG00000020048) #26
Cat	MODERN SPECIES	239	STPG1 (ENSFCAG00000002066) #7	NIPAL3 (ENSFCAG00000002067) #8	RCAN3 (ENSFCAG00000041570) #9	SRRM1 (ENSFCAG00000000678) #11	CLIC4 (ENSFCAG00000044507) #12	RUNX3 (ENSFCAG00000036616) #13	ENSFCAG00000043095 #14	ENSFCAG00000010324 #14	RSRP1 (ENSFCAG00000029142) #15	TMEM50A (ENSFCAG00000012788) #16	ENSFCAG00000012789 #17	MACO1 (ENSFCAG00000012790) #18	LDLRAP1 (ENSFCAG00000036460) #19	MAN1C1 (ENSFCAG00000012792) #20	SELENON (ENSFCAG00000012793) #21	MTFR1L (ENSFCAG00000012794) #22	PAQR7 (ENSFCAG00000026046) #24	ENSFCAG00000040721 #25	PAFAH2 (ENSFCAG00000012798) #26	ENSFCAG00000037910	EXTL1 (ENSFCAG00000012799) #27	SLC30A2 (ENSFCAG00000045714) #28	TRIM63 (ENSFCAG00000012801) #29	PDIK1L (ENSFCAG00000025403) #30	FAM110D (ENSFCAG00000024467) #31	C1orf232 (ENSFCAG00000040939) #32	ZNF593 (ENSFCAG00000023239) #34	ZNF593OS (ENSFCAG00000032124) #33	CNKSR1 (ENSFCAG00000012803) #35	CATSPER4 (ENSFCAG00000012804) #36	CEP85 (ENSFCAG00000012805)
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00390000017845.h #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Equus	ANCESTRAL SPECIES	2	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT01070000253847 #33	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Horse	MODERN SPECIES	11	NIPAL3 (ENSECAG00000022826) #8	RCAN3 (ENSECAG00000020134) #9	NCMAP (ENSECAG00000042902) #10	SRRM1 (ENSECAG00000026981) #11	CLIC4 (ENSECAG00000016168) #12	RUNX3 (ENSECAG00000014360) #13	ENSECAG00000012023 #14	ENSECAG00000010440 #14	RSRP1 (ENSECAG00000007744) #15	TMEM50A (ENSECAG00000022212) #16	ENSECAG00000013140 #17	MACO1 (ENSECAG00000002018) #18	LDLRAP1 (ENSECAG00000019441) #19	MAN1C1 (ENSECAG00000014244) #20	SELENON (ENSECAG00000011412) #21	MTFR1L (ENSECAG00000008719) #22	ENSECAG00000051034	ENSECAG00000050748	AUNIP (ENSECAG00000007562) #23	PAQR7 (ENSECAG00000005649) #24	STMN1 (ENSECAG00000045613) #25	PAFAH2 (ENSECAG00000015859) #26	EXTL1 (ENSECAG00000013612) #27	SLC30A2 (ENSECAG00000010399) #28	TRIM63 (ENSECAG00000024448) #29	PDIK1L (ENSECAG00000024441) #30	FAM110D (ENSECAG00000005628) #31	ZNF593 (ENSECAG00000023934) #34	CNKSR1 (ENSECAG00000019108) #35	C1orf232 (ENSECAG00000028695) #32	CATSPER4 (ENSECAG00000017214) #36
Donkey	MODERN SPECIES	25	RCAN3 (ENSEASG00005004277) #9	ENSEASG00005031143 #10	SRRM1 (ENSEASG00005004270) #11	CLIC4 (ENSEASG00005004261) #12	RUNX3 (ENSEASG00005034237) #13	ENSEASG00005032869 #14	ENSEASG00005004224 #14	RSRP1 (ENSEASG00005004216) #15	TMEM50A (ENSEASG00005038339) #16	ENSEASG00005004204 #17	MACO1 (ENSEASG00005004196) #18	ENSEASG00005004192	LDLRAP1 (ENSEASG00005004188) #19	MAN1C1 (ENSEASG00005004181) #20	SELENON (ENSEASG00005004172) #21	MTFR1L (ENSEASG00005004168) #22	AUNIP (ENSEASG00005004165) #23	PAQR7 (ENSEASG00005037634) #24	STMN1 (ENSEASG00005024544) #25	PAFAH2 (ENSEASG00005004072) #26	EXTL1 (ENSEASG00005004055) #27	SLC30A2 (ENSEASG00005004044) #28	TRIM63 (ENSEASG00005004036) #29	PDIK1L (ENSEASG00005027803) #30	FAM110D (ENSEASG00005004033) #31	C1orf232 (ENSEASG00005031359) #32	CNKSR1 (ENSEASG00005003974) #35	ZNF593OS (ENSEASG00005004026) #33	CATSPER4 (ENSEASG00005003966) #36	CEP85 (ENSEASG00005003964)	ENSEASG00005038458
Chiroptera	ANCESTRAL SPECIES		ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.h #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Megabat	MODERN SPECIES	2722										TMEM50A (ENSPVAG00000006331) #16	ENSPVAG00000006333 #17	MACO1 (ENSPVAG00000006335) #18	LDLRAP1 (ENSPVAG00000006336) #19	MAN1C1 (ENSPVAG00000006337) #20	SELENON (ENSPVAG00000006338) #21	MTFR1L (ENSPVAG00000006340) #22	AUNIP (ENSPVAG00000006341) #23	PAQR7 (ENSPVAG00000006343) #24	STMN1 (ENSPVAG00000006344) #25	PAFAH2 (ENSPVAG00000006346) #26	EXTL1 (ENSPVAG00000006348) #27	SLC30A2 (ENSPVAG00000006350) #28	TRIM63 (ENSPVAG00000006352) #29	PDIK1L (ENSPVAG00000006355) #30
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.h #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1904															ENSMLUG00000027051	ENSMLUG00000030477 #22	ENSMLUG00000026279
Microbat	MODERN SPECIES	1326								SYF2 (ENSMLUG00000001885) #14	RSRP1 (ENSMLUG00000001891) #15	TMEM50A (ENSMLUG00000001612) #16	ENSMLUG00000001615 #17	MACO1 (ENSMLUG00000006389) #18	LDLRAP1 (ENSMLUG00000005070) #19	ENSMLUG00000005078 #20	SELENON (ENSMLUG00000005084) #21	ENSMLUG00000010738 #22	AUNIP (ENSMLUG00000013548) #23	PAQR7 (ENSMLUG00000012498) #24	STMN1 (ENSMLUG00000010762) #25	PAFAH2 (ENSMLUG00000010782) #26	EXTL1 (ENSMLUG00000015619) #27	SLC30A2 (ENSMLUG00000015637) #28	TRIM63 (ENSMLUG00000015646) #29	PDIK1L (ENSMLUG00000015663) #30	ZNF593 (ENSMLUG00000010172) #34	CNKSR1 (ENSMLUG00000010184) #35	CATSPER4 (ENSMLUG00000010225) #36	CEP85 (ENSMLUG00000010255)	SH3BGRL3 (ENSMLUG00000010282)	UBXN11 (ENSMLUG00000010299)	ENSMLUG00000015243
Greater horseshoe bat	MODERN SPECIES	27	STPG1 (ENSRFEG00010002240) #7	NIPAL3 (ENSRFEG00010002269) #8	RCAN3 (ENSRFEG00010002325) #9	NCMAP (ENSRFEG00010002384) #10	SRRM1 (ENSRFEG00010002423) #11	CLIC4 (ENSRFEG00010002473) #12	RUNX3 (ENSRFEG00010002500) #13	SYF2 (ENSRFEG00010002536) #14	RSRP1 (ENSRFEG00010002559) #15	TMEM50A (ENSRFEG00010002579) #16	ENSRFEG00010002597 #17	MACO1 (ENSRFEG00010002636) #18	LDLRAP1 (ENSRFEG00010002681) #19	MAN1C1 (ENSRFEG00010002833) #20	SELENON (ENSRFEG00010003076) #21	MTFR1L (ENSRFEG00010003144) #22	AUNIP (ENSRFEG00010003162) #23	PAQR7 (ENSRFEG00010003176) #24	STMN1 (ENSRFEG00010003199) #25	PAFAH2 (ENSRFEG00010003219) #26	EXTL1 (ENSRFEG00010003257) #27	SLC30A2 (ENSRFEG00010003327) #28	TRIM63 (ENSRFEG00010003384) #29	PDIK1L (ENSRFEG00010003406) #30	FAM110D (ENSRFEG00010003414) #31	C1orf232 (ENSRFEG00010003437) #32	ZNF593 (ENSRFEG00010003466) #34	ZNF593OS (ENSRFEG00010003482) #33	CNKSR1 (ENSRFEG00010003505) #35	CATSPER4 (ENSRFEG00010003546) #36	CEP85 (ENSRFEG00010003602)
Artiodactyla	ANCESTRAL SPECIES		ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Suina	ANCESTRAL SPECIES	10	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Pig	MODERN SPECIES	14	STPG1 (ENSSSCG00000003541) #7	NIPAL3 (ENSSSCG00000003543) #8	RCAN3 (ENSSSCG00000024818) #9	SRRM1 (ENSSSCG00000032947) #11	ENSSSCG00000042897	CLIC4 (ENSSSCG00000038994) #12	RUNX3 (ENSSSCG00000032686) #13	SYF2 (ENSSSCG00000037481) #14	RSRP1 (ENSSSCG00000034449) #15	TMEM50A (ENSSSCG00000024267) #16	RHCE (ENSSSCG00000026791) #17	MACO1 (ENSSSCG00000030682) #18	LDLRAP1 (ENSSSCG00000003549) #19	MAN1C1 (ENSSSCG00000023235) #20	SELENON (ENSSSCG00000003554) #21	MTFR1L (ENSSSCG00000003553) #22	AUNIP (ENSSSCG00000003552) #23	PAQR7 (ENSSSCG00000003551) #24	STMN1 (ENSSSCG00000026257) #25	PAFAH2 (ENSSSCG00000038619) #26	EXTL1 (ENSSSCG00000029558) #27	SLC30A2 (ENSSSCG00000026386) #28	TRIM63 (ENSSSCG00000027684) #29	PDIK1L (ENSSSCG00000030660) #30	FAM110D (ENSSSCG00000031074) #31	C1orf232 (ENSSSCG00000041671) #32	ZNF593 (ENSSSCG00000045776) #34	ZNF593OS (ENSSSCG00000059106) #33	CNKSR1 (ENSSSCG00000028387) #35	CATSPER4 (ENSSSCG00000026526) #36	ENSSSCG00000045528 #37
Chacoan peccary	MODERN SPECIES	808	STPG1 (ENSCWAG00000004830) #7	NIPAL3 (ENSCWAG00000004914) #8	RCAN3 (ENSCWAG00000004967) #9	NCMAP (ENSCWAG00000005045) #10	SRRM1 (ENSCWAG00000005079) #11	CLIC4 (ENSCWAG00000005232) #12	RUNX3 (ENSCWAG00000005265) #13	SYF2 (ENSCWAG00000005335) #14	RSRP1 (ENSCWAG00000005360) #15	TMEM50A (ENSCWAG00000005387) #16	ENSCWAG00000005468 #17	MACO1 (ENSCWAG00000005993) #18	LDLRAP1 (ENSCWAG00000006041) #19	MAN1C1 (ENSCWAG00000006068) #20	SELENON (ENSCWAG00000006177) #21	MTFR1L (ENSCWAG00000006278) #22	AUNIP (ENSCWAG00000006323) #23	PAQR7 (ENSCWAG00000006353) #24	STMN1 (ENSCWAG00000006366) #25	PAFAH2 (ENSCWAG00000006390) #26	EXTL1 (ENSCWAG00000006453) #27	SLC30A2 (ENSCWAG00000006520) #28	TRIM63 (ENSCWAG00000006563) #29	PDIK1L (ENSCWAG00000006604) #30	FAM110D (ENSCWAG00000006619) #31	C1orf232 (ENSCWAG00000006633) #32	ZNF593 (ENSCWAG00000006675) #34	ZNF593OS (ENSCWAG00000006702) #33	CNKSR1 (ENSCWAG00000006730) #35	CATSPER4 (ENSCWAG00000006950) #36	ENSCWAG00000007017 #37
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Camelidae	ANCESTRAL SPECIES	3	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b	ENSGT00940000157260
Arabian camel	MODERN SPECIES	4	RCAN3 (ENSCDRG00005004258) #9	NCMAP (ENSCDRG00005004364) #10	SRRM1 (ENSCDRG00005004402) #11	CLIC4 (ENSCDRG00005004479) #12	RUNX3 (ENSCDRG00005004492) #13	ENSCDRG00005004517	SYF2 (ENSCDRG00005004530) #14	ENSCDRG00005004554 #15	TMEM50A (ENSCDRG00005004599) #16	ENSCDRG00005004654 #17	MACO1 (ENSCDRG00005004933) #18	LDLRAP1 (ENSCDRG00005005069) #19	MAN1C1 (ENSCDRG00005005111) #20	ENSCDRG00005005197 #21	ENSCDRG00005005250 #21	MTFR1L (ENSCDRG00005005263) #22	AUNIP (ENSCDRG00005005301) #23	PAQR7 (ENSCDRG00005005321) #24	STMN1 (ENSCDRG00005005334) #25	PAFAH2 (ENSCDRG00005005371) #26	EXTL1 (ENSCDRG00005005432) #27	SLC30A2 (ENSCDRG00005005475) #28	TRIM63 (ENSCDRG00005005541) #29	ENSCDRG00005005570	PDIK1L (ENSCDRG00005005581) #30	FAM110D (ENSCDRG00005005595) #31	C1orf232 (ENSCDRG00005005611) #32	ZNF593 (ENSCDRG00005005654) #34	ZNF593OS (ENSCDRG00005005667) #33	CNKSR1 (ENSCDRG00005005684) #35	CATSPER4 (ENSCDRG00005005716) #36
Alpaca	MODERN SPECIES	5678																MTFR1L (ENSVPAG00000004314) #22	ENSVPAG00000004313 #23
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Pecora	ANCESTRAL SPECIES	16	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00960000188436	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.b #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Percora_a	ANCESTRAL SPECIES	5	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00960000188436	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.b #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Bovidae	ANCESTRAL SPECIES	8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00960000188537	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00960000188436	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.b #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Bovinae	ANCESTRAL SPECIES	5	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.e #11	ENSGT00960000188537	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00960000188436	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.b #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Bos	ANCESTRAL SPECIES	6	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.e #11	ENSGT00960000188537	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00960000188436	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.b #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Bos_a	ANCESTRAL SPECIES	4	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.e #11	ENSGT00960000188537	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00960000188436	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.b #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Wild yak	MODERN SPECIES	762							SYF2 (ENSBMUG00000015745) #14	RSRP1 (ENSBMUG00000015768) #15	TMEM50A (ENSBMUG00000015782) #16	ENSBMUG00000015789 #17	MACO1 (ENSBMUG00000015821) #18	LDLRAP1 (ENSBMUG00000015859) #19	MAN1C1 (ENSBMUG00000015901) #20	ENSBMUG00000015914	SELENON (ENSBMUG00000015941) #21	MTFR1L (ENSBMUG00000015960) #22	AUNIP (ENSBMUG00000015975) #23	PAQR7 (ENSBMUG00000015979) #24	ENSBMUG00000016006 #25	PAFAH2 (ENSBMUG00000016029) #26	EXTL1 (ENSBMUG00000016039) #27	SLC30A2 (ENSBMUG00000016075) #28	TRIM63 (ENSBMUG00000016092) #29	PDIK1L (ENSBMUG00000016103) #30	FAM110D (ENSBMUG00000016121) #31	ZNF593 (ENSBMUG00000016147) #34	ZNF593OS (ENSBMUG00000016158) #33	CNKSR1 (ENSBMUG00000016212) #35	CATSPER4 (ENSBMUG00000016237) #36	ENSBMUG00000016246 #37	CEP85 (ENSBMUG00000016281)
Domestic yak	MODERN SPECIES	11	ENSBGRG00000006848 #10	ENSBGRG00000006897 #11	NOP10 (ENSBGRG00000007282)	CLIC4 (ENSBGRG00000007301) #12	RUNX3 (ENSBGRG00000007394) #13	ENSBGRG00000007540 #14	ENSBGRG00000007651	TMEM50A (ENSBGRG00000007668) #16	ENSBGRG00000007832 #17	MACO1 (ENSBGRG00000007916) #18	LDLRAP1 (ENSBGRG00000008061) #19	MAN1C1 (ENSBGRG00000008298) #20	ENSBGRG00000008465	ENSBGRG00000008512 #21	ENSBGRG00000008545 #21	MTFR1L (ENSBGRG00000008577) #22	ENSBGRG00000008672 #24	ENSBGRG00000008716	ENSBGRG00000008727 #25	PAFAH2 (ENSBGRG00000008769) #26	EXTL1 (ENSBGRG00000008937) #27	SLC30A2 (ENSBGRG00000009039) #28	TRIM63 (ENSBGRG00000005620) #29	PDIK1L (ENSBGRG00000005649) #30	FAM110D (ENSBGRG00000005660) #31	C1orf232 (ENSBGRG00000005674) #32	ZNF593 (ENSBGRG00000005708) #34	ZNF593OS (ENSBGRG00000005739) #33	CNKSR1 (ENSBGRG00000005760) #35	CATSPER4 (ENSBGRG00000005907) #36	ENSBGRG00000005983 #37
Bos_b	ANCESTRAL SPECIES	20	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.e #11	ENSGT00960000188537	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00960000188436	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.b #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Hybrid Bos Indicus	MODERN SPECIES	11	ENSBIXG00005030007	RCAN3 (ENSBIXG00005029979) #9	SRRM1 (ENSBIXG00005029914) #11	CLIC4 (ENSBIXG00005029891) #12	RUNX3 (ENSBIXG00005029882) #13	ENSBIXG00005029871	SYF2 (ENSBIXG00005029859) #14	RSRP1 (ENSBIXG00005029845) #15	TMEM50A (ENSBIXG00005029829) #16	ENSBIXG00005029791 #17	MACO1 (ENSBIXG00005029757) #18	LDLRAP1 (ENSBIXG00005029721) #19	MAN1C1 (ENSBIXG00005029692) #20	ENSBIXG00005029678	SELENON (ENSBIXG00005029596) #21	MTFR1L (ENSBIXG00005029521) #22	AUNIP (ENSBIXG00005029499) #23	PAQR7 (ENSBIXG00005029478) #24	ENSBIXG00005029436 #25	PAFAH2 (ENSBIXG00005029414) #26	EXTL1 (ENSBIXG00005029379) #27	SLC30A2 (ENSBIXG00005029346) #28	TRIM63 (ENSBIXG00005029329) #29	PDIK1L (ENSBIXG00005029304) #30	FAM110D (ENSBIXG00005029291) #31	C1orf232 (ENSBIXG00005029279) #32	ZNF593 (ENSBIXG00005000017) #34	ZNF593OS (ENSBIXG00005007867) #33	CNKSR1 (ENSBIXG00005007881) #35	CATSPER4 (ENSBIXG00005007890) #36	ENSBIXG00005007899 #37
Cow	MODERN SPECIES	11	RCAN3 (ENSBTAG00000017452) #9	NCMAP (ENSBTAG00000012604) #10	SRRM1 (ENSBTAG00000013772) #11	ENSBTAG00000054129	CLIC4 (ENSBTAG00000009470) #12	RUNX3 (ENSBTAG00000050474) #13	SYF2 (ENSBTAG00000001651) #14	RSRP1 (ENSBTAG00000015222) #15	TMEM50A (ENSBTAG00000001296) #16	ENSBTAG00000001297 #17	MACO1 (ENSBTAG00000002988) #18	LDLRAP1 (ENSBTAG00000001050) #19	MAN1C1 (ENSBTAG00000003069) #20	ENSBTAG00000052666	SELENON (ENSBTAG00000021778) #21	MTFR1L (ENSBTAG00000021781) #22	AUNIP (ENSBTAG00000021786) #23	PAQR7 (ENSBTAG00000021787) #24	STMN1 (ENSBTAG00000013761) #25	PAFAH2 (ENSBTAG00000005105) #26	EXTL1 (ENSBTAG00000006349) #27	SLC30A2 (ENSBTAG00000006355) #28	TRIM63 (ENSBTAG00000005085) #29	PDIK1L (ENSBTAG00000001513) #30	FAM110D (ENSBTAG00000013131) #31	ZNF593 (ENSBTAG00000009562) #34	ZNF593OS (ENSBTAG00000050680) #33	CNKSR1 (ENSBTAG00000019399) #35	CATSPER4 (ENSBTAG00000026638) #36	CEP85 (ENSBTAG00000009579)	SH3BGRL3 (ENSBTAG00000009580)
American bison	MODERN SPECIES	3363	RCAN3 (ENSBBBG00000014529) #9	NCMAP (ENSBBBG00000014506) #10	SRRM1 (ENSBBBG00000014498) #11	ENSBBBG00000008150	CLIC4 (ENSBBBG00000003335) #12	ENSBBBG00000007127 #13	SYF2 (ENSBBBG00000003323) #14	RSRP1 (ENSBBBG00000006948) #15	TMEM50A (ENSBBBG00000014406) #16	ENSBBBG00000001411 #17	MACO1 (ENSBBBG00000003299) #18	LDLRAP1 (ENSBBBG00000014379) #19	MAN1C1 (ENSBBBG00000001416) #20	ENSBBBG00000014327	SELENON (ENSBBBG00000009117) #21	MTFR1L (ENSBBBG00000014312) #22	AUNIP (ENSBBBG00000003252) #23	PAQR7 (ENSBBBG00000014305) #24	ENSBBBG00000014301 #25	PAFAH2 (ENSBBBG00000014290) #26	EXTL1 (ENSBBBG00000014277) #27	SLC30A2 (ENSBBBG00000014261) #28	TRIM63 (ENSBBBG00000014242) #29	PDIK1L (ENSBBBG00000006879) #30	C1orf232 (ENSBBBG00000014227) #32	ZNF593 (ENSBBBG00000014219) #34	ZNF593OS (ENSBBBG00000003222) #33	ENSBBBG00000003221 #35	ENSBBBG00000014206 #35	CATSPER4 (ENSBBBG00000014191) #36	ENSBBBG00000001444 #37
Caprinae	ANCESTRAL SPECIES	5	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00960000188537	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.b #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Goat	MODERN SPECIES	11	NIPAL3 (ENSCHIG00000021129) #8	RCAN3 (ENSCHIG00000021890) #9	NCMAP (ENSCHIG00000019328) #10	SRRM1 (ENSCHIG00000014656) #11	ENSCHIG00000007783	CLIC4 (ENSCHIG00000011710) #12	RUNX3 (ENSCHIG00000024379) #13	SYF2 (ENSCHIG00000020874) #14	RSRP1 (ENSCHIG00000015600) #15	TMEM50A (ENSCHIG00000025877) #16	ENSCHIG00000026132 #17	MACO1 (ENSCHIG00000026786) #18	LDLRAP1 (ENSCHIG00000003548) #19	MAN1C1 (ENSCHIG00000017004) #20	SELENON (ENSCHIG00000021642) #21	MTFR1L (ENSCHIG00000021935) #22	AUNIP (ENSCHIG00000014935) #23	ENSCHIG00000023552 #25	PAFAH2 (ENSCHIG00000020000) #26	EXTL1 (ENSCHIG00000013043) #27	SLC30A2 (ENSCHIG00000026864) #28	TRIM63 (ENSCHIG00000017800) #29	PDIK1L (ENSCHIG00000019234) #30	FAM110D (ENSCHIG00000012947) #31	ZNF593 (ENSCHIG00000011277) #34	ZNF593OS (ENSCHIG00000020316) #33	CNKSR1 (ENSCHIG00000019843) #35	CATSPER4 (ENSCHIG00000013699) #36	CEP85 (ENSCHIG00000008590)	SH3BGRL3 (ENSCHIG00000023533)	UBXN11 (ENSCHIG00000019788)
Rambouillet Sheep	MODERN SPECIES	11	NIPAL3 (ENSOARG00020010878) #8	RCAN3 (ENSOARG00020010543) #9	NCMAP (ENSOARG00020010447) #10	SRRM1 (ENSOARG00020010009) #11	ENSOARG00020009955	CLIC4 (ENSOARG00020009910) #12	RUNX3 (ENSOARG00020009815) #13	SYF2 (ENSOARG00020009730) #14	RSRP1 (ENSOARG00020009704) #15	TMEM50A (ENSOARG00020009675) #16	ENSOARG00020009279 #17	MACO1 (ENSOARG00020009165) #18	LDLRAP1 (ENSOARG00020009117) #19	MAN1C1 (ENSOARG00020008879) #20	SELENON (ENSOARG00020008602) #21	MTFR1L (ENSOARG00020008503) #22	AUNIP (ENSOARG00020008461) #23	PAQR7 (ENSOARG00020008442) #24	STMN1 (ENSOARG00020008402) #25	PAFAH2 (ENSOARG00020008352) #26	EXTL1 (ENSOARG00020008196) #27	SLC30A2 (ENSOARG00020008017) #28	ENSOARG00020007999	TRIM63 (ENSOARG00020007955) #29	ENSOARG00020007917 #30	FAM110D (ENSOARG00020007900) #31	C1orf232 (ENSOARG00020007857) #32	ZNF593 (ENSOARG00020007802) #34	ZNF593OS (ENSOARG00020007765) #33	CATSPER4 (ENSOARG00020007573) #36	ENSOARG00020007525 #37
Siberian musk deer	MODERN SPECIES	354	NIPAL3 (ENSMMSG00000007511) #8	RCAN3 (ENSMMSG00000007436) #9	NCMAP (ENSMMSG00000007423) #10	SRRM1 (ENSMMSG00000007331) #11	ENSMMSG00000007285 #12	RUNX3 (ENSMMSG00000007223) #13	SYF2 (ENSMMSG00000007178) #14	RSRP1 (ENSMMSG00000007148) #15	ENSMMSG00000007119	TMEM50A (ENSMMSG00000007075) #16	ENSMMSG00000006479 #17	MACO1 (ENSMMSG00000006393) #18	LDLRAP1 (ENSMMSG00000006364) #19	MAN1C1 (ENSMMSG00000006256) #20	SELENON (ENSMMSG00000006176) #21	MTFR1L (ENSMMSG00000006135) #22	AUNIP (ENSMMSG00000006121) #23	PAQR7 (ENSMMSG00000006113) #24	STMN1 (ENSMMSG00000006084) #25	PAFAH2 (ENSMMSG00000006055) #26	EXTL1 (ENSMMSG00000006026) #27	SLC30A2 (ENSMMSG00000005989) #28	TRIM63 (ENSMMSG00000005949) #29	PDIK1L (ENSMMSG00000005925) #30	FAM110D (ENSMMSG00000005911) #31	C1orf232 (ENSMMSG00000005886) #32	ZNF593 (ENSMMSG00000005859) #34	ZNF593OS (ENSMMSG00000005838) #33	CNKSR1 (ENSMMSG00000005791) #35	CATSPER4 (ENSMMSG00000005745) #36	ENSMMSG00000005704 #37
Yarkand deer	MODERN SPECIES	31	RCAN3 (ENSCHYG00000010444) #9	SRRM1 (ENSCHYG00000000242) #11	ENSCHYG00000000334	ENSCHYG00000000352 #12	RUNX3 (ENSCHYG00000000382) #13	SYF2 (ENSCHYG00000000406) #14	RSRP1 (ENSCHYG00000000419) #15	TMEM50A (ENSCHYG00000000448) #16	ENSCHYG00000000474 #17	MACO1 (ENSCHYG00000000511) #18	LDLRAP1 (ENSCHYG00000000571) #19	MAN1C1 (ENSCHYG00000000620) #20	ENSCHYG00000000668	ENSCHYG00000000679 #21	ENSCHYG00000000694 #21	MTFR1L (ENSCHYG00000000710) #22	ENSCHYG00000000762 #24	ENSCHYG00000000794 #25	PAFAH2 (ENSCHYG00000000831) #26	EXTL1 (ENSCHYG00000000885) #27	SLC30A2 (ENSCHYG00000000940) #28	TRIM63 (ENSCHYG00000000982) #29	PDIK1L (ENSCHYG00000001005) #30	FAM110D (ENSCHYG00000001019) #31	C1orf232 (ENSCHYG00000001033) #32	ZNF593 (ENSCHYG00000001057) #34	ZNF593OS (ENSCHYG00000001078) #33	CNKSR1 (ENSCHYG00000001105) #35	CATSPER4 (ENSCHYG00000001149) #36	ENSCHYG00000001180 #37	CEP85 (ENSCHYG00000001222)
Cetacea	DUPLICATION
Cetacea	ANCESTRAL SPECIES		ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b.c #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Odontoceti	ANCESTRAL SPECIES		ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b.c #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b.c #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.a #25	ENSGT01030000234597.a.a.j #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00390000003738.a.a.b.d	ENSGT00390000004116 #10	ENSGT00940000164805	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b.c #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.j #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Monodontidae	ANCESTRAL SPECIES		ENSGT00390000003738.a.a.b.d	ENSGT00390000004116 #10	ENSGT00940000164805	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.g.a #14	ENSGT00390000017845.g.b #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b.c #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a.i.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Beluga whale	MODERN SPECIES	51	ENSDLEG00000010368	NCMAP (ENSDLEG00000010346) #10	ENSDLEG00000010333	SRRM1 (ENSDLEG00000010258) #11	CLIC4 (ENSDLEG00000010219) #12	RUNX3 (ENSDLEG00000010192) #13	ENSDLEG00000010163 #14	ENSDLEG00000010060 #14	RSRP1 (ENSDLEG00000010009) #15	TMEM50A (ENSDLEG00000009961) #16	ENSDLEG00000009903 #17	TMEM57 (ENSDLEG00000009846) #18	LDLRAP1 (ENSDLEG00000009815) #19	MAN1C1 (ENSDLEG00000009789) #20	SELENON (ENSDLEG00000009770) #21	MTFR1L (ENSDLEG00000009746) #22	AUNIP (ENSDLEG00000009735) #23	PAQR7 (ENSDLEG00000009730) #24	STMN1 (ENSDLEG00000009712) #25	PAFAH2 (ENSDLEG00000009690) #26	EXTL1 (ENSDLEG00000009646) #27	SLC30A2 (ENSDLEG00000009613) #28	TRIM63 (ENSDLEG00000009577) #29	PDIK1L (ENSDLEG00000009560) #30	FAM110D (ENSDLEG00000009553) #31	ENSDLEG00000009542 #34	CNKSR1 (ENSDLEG00000009366) #35	CATSPER4 (ENSDLEG00000009267) #36	CEP85 (ENSDLEG00000009215)	SH3BGRL3 (ENSDLEG00000009177)	UBXN11 (ENSDLEG00000009141)
Narwhal	MODERN SPECIES	304	ENSMMNG00015007308	NCMAP (ENSMMNG00015007295) #10	SRRM1 (ENSMMNG00015007227) #11	CLIC4 (ENSMMNG00015007165) #12	RUNX3 (ENSMMNG00015007131) #13	ENSMMNG00015007093 #14	ENSMMNG00015007068 #14	RSRP1 (ENSMMNG00015007041) #15	TMEM50A (ENSMMNG00015007015) #16	ENSMMNG00015006957 #17	MACO1 (ENSMMNG00015006910) #18	LDLRAP1 (ENSMMNG00015006880) #19	MAN1C1 (ENSMMNG00015006828) #20	ENSMMNG00015006784 #21	ENSMMNG00015006766 #21	ENSMMNG00015006725 #22	AUNIP (ENSMMNG00015006698) #23	PAQR7 (ENSMMNG00015006680) #24	STMN1 (ENSMMNG00015006656) #25	PAFAH2 (ENSMMNG00015006626) #26	EXTL1 (ENSMMNG00015006601) #27	SLC30A2 (ENSMMNG00015006563) #28	TRIM63 (ENSMMNG00015006530) #29	PDIK1L (ENSMMNG00015006513) #30	FAM110D (ENSMMNG00015006501) #31	C1orf232 (ENSMMNG00015006467) #32	ZNF593 (ENSMMNG00015006375) #34	ZNF593OS (ENSMMNG00015006362) #33	CNKSR1 (ENSMMNG00015006346) #35	CATSPER4 (ENSMMNG00015006313) #36	CEP85 (ENSMMNG00015006269)
Vaquita	MODERN SPECIES		ENSPSNG00000001293	NCMAP (ENSPSNG00000001307) #10	ENSPSNG00000001318	SRRM1 (ENSPSNG00000001348) #11	CLIC4 (ENSPSNG00000001405) #12	RUNX3 (ENSPSNG00000001431) #13	ENSPSNG00000001460 #14	ENSPSNG00000001485 #14	RSRP1 (ENSPSNG00000001513) #15	TMEM50A (ENSPSNG00000001538) #16	ENSPSNG00000001626 #17	MACO1 (ENSPSNG00000001819) #18	LDLRAP1 (ENSPSNG00000001864) #19	MAN1C1 (ENSPSNG00000001893) #20	SELENON (ENSPSNG00000001946) #21	MTFR1L (ENSPSNG00000001982) #22	AUNIP (ENSPSNG00000002010) #23	PAQR7 (ENSPSNG00000002029) #24	STMN1 (ENSPSNG00000002046) #25	PAFAH2 (ENSPSNG00000002068) #26	EXTL1 (ENSPSNG00000002094) #27	SLC30A2 (ENSPSNG00000002140) #28	TRIM63 (ENSPSNG00000002176) #29	PDIK1L (ENSPSNG00000002204) #30	FAM110D (ENSPSNG00000002222) #31	ENSPSNG00000002233 #32	ZNF593 (ENSPSNG00000002250) #34	ZNF593OS (ENSPSNG00000002265) #33	CNKSR1 (ENSPSNG00000002297) #35	CATSPER4 (ENSPSNG00000002399) #36	CEP85 (ENSPSNG00000002441)
Dolphin	MODERN SPECIES	1267													LDLRAP1 (ENSTTRG00000012427) #19	MAN1C1 (ENSTTRG00000012448) #20	SELENON (ENSTTRG00000012465) #21	MTFR1L (ENSTTRG00000012479) #22	AUNIP (ENSTTRG00000012485) #23	PAQR7 (ENSTTRG00000012491) #24	STMN1 (ENSTTRG00000012495) #25
Sperm whale	MODERN SPECIES	14	NCMAP (ENSPCTG00005007165) #10	ENSPCTG00005007147	ENSPCTG00005007125	SRRM1 (ENSPCTG00005006969) #11	CLIC4 (ENSPCTG00005006926) #12	RUNX3 (ENSPCTG00005006898) #13	ENSPCTG00005006850 #14	ENSPCTG00005006738 #14	RSRP1 (ENSPCTG00005006694) #15	TMEM50A (ENSPCTG00005006647) #16	ENSPCTG00005005488 #17	MACO1 (ENSPCTG00005005347) #18	LDLRAP1 (ENSPCTG00005005304) #19	MAN1C1 (ENSPCTG00005005276) #20	SELENON (ENSPCTG00005005120) #21	MTFR1L (ENSPCTG00005005037) #22	AUNIP (ENSPCTG00005005872) #23	PAQR7 (ENSPCTG00005005864) #24	EXTL1 (ENSPCTG00005005827) #27	SLC30A2 (ENSPCTG00005005708) #28	TRIM63 (ENSPCTG00005005658) #29	PDIK1L (ENSPCTG00005005630) #30	CEP85 (ENSPCTG00005005549)	SH3BGRL3 (ENSPCTG00005005515)	UBXN11 (ENSPCTG00005005263)	ENSPCTG00005005213	CRYBG2 (ENSPCTG00005005148)	ZNF683 (ENSPCTG00005005094)	LIN28A (ENSPCTG00005005060)	DHDDS (ENSPCTG00005004941)	ENSPCTG00005004910
Blue whale	MODERN SPECIES		ENSBMSG00010005393 #10	ENSBMSG00010005404	ENSBMSG00010005412	SRRM1 (ENSBMSG00010005436) #11	CLIC4 (ENSBMSG00010005464) #12	RUNX3 (ENSBMSG00010005477) #13	ENSBMSG00010005490 #14	ENSBMSG00010005498 #14	RSRP1 (ENSBMSG00010005505) #15	TMEM50A (ENSBMSG00010005519) #16	ENSBMSG00010005597 #17	MACO1 (ENSBMSG00010005847) #18	LDLRAP1 (ENSBMSG00010005875) #19	MAN1C1 (ENSBMSG00010005899) #20	SELENON (ENSBMSG00010005935) #21	ENSBMSG00010005965 #22	AUNIP (ENSBMSG00010005981) #23	PAQR7 (ENSBMSG00010006003) #24	ENSBMSG00010006015 #25	PAFAH2 (ENSBMSG00010006026) #26	EXTL1 (ENSBMSG00010006040) #27	SLC30A2 (ENSBMSG00010006074) #28	TRIM63 (ENSBMSG00010006119) #29	PDIK1L (ENSBMSG00010006131) #30	FAM110D (ENSBMSG00010006138) #31	C1orf232 (ENSBMSG00010006145) #32	ZNF593 (ENSBMSG00010006155) #34	ZNF593OS (ENSBMSG00010006167) #33	CNKSR1 (ENSBMSG00010006179) #35	CATSPER4 (ENSBMSG00010006207) #36	CEP85 (ENSBMSG00010006227)
Cetacea	ANCESTRAL SPECIES																	ENSGT00950000183215.c.b.d #22
Odontoceti	ANCESTRAL SPECIES																	ENSGT00950000183215.c.b.d #22
Odontoceti_a	ANCESTRAL SPECIES																	ENSGT00950000183215.c.b.d #22
Odontoceti_b	ANCESTRAL SPECIES																	ENSGT00950000183215.c.b.d #22
Monodontidae	ANCESTRAL SPECIES																	ENSGT00950000183215.c.b.d #22
Beluga whale	MODERN SPECIES	19	RABEPK (ENSDLEG00000015453)	PPP6C (ENSDLEG00000015466)	SCAI (ENSDLEG00000015503)	GOLGA1 (ENSDLEG00000015625)	ARPC5L (ENSDLEG00000015658)	RPL35 (ENSDLEG00000015667)	OLFML2A (ENSDLEG00000015685)	NR6A1 (ENSDLEG00000015711)	ENSDLEG00000015771	NR5A1 (ENSDLEG00000015804)	PSMB7 (ENSDLEG00000000050)	NEK6 (ENSDLEG00000000066)	LHX2 (ENSDLEG00000000097)	DENND1A (ENSDLEG00000000198)	ENSDLEG00000000331	ENSDLEG00000000352 #22	CRB2 (ENSDLEG00000000376)	STRBP (ENSDLEG00000000427)	RABGAP1 (ENSDLEG00000000486)	ZBTB26 (ENSDLEG00000000549)	RC3H2 (ENSDLEG00000000584)	PDCL (ENSDLEG00000000624)	ENSDLEG00000000638	OR5C1 (ENSDLEG00000000653)	PTGS1 (ENSDLEG00000000675)	MRRF (ENSDLEG00000000707)	RBM18 (ENSDLEG00000000722)	LHX6 (ENSDLEG00000000734)	MORN5 (ENSDLEG00000000753)	NDUFA8 (ENSDLEG00000000764)	TTLL11 (ENSDLEG00000000788)
Narwhal	MODERN SPECIES	312	HSPA5 (ENSMMNG00015019608)	RABEPK (ENSMMNG00015019570)	PPP6C (ENSMMNG00015019538)	SCAI (ENSMMNG00015019495)	GOLGA1 (ENSMMNG00015019440)	ARPC5L (ENSMMNG00015019410)	RPL35 (ENSMMNG00015019387)	OLFML2A (ENSMMNG00015019345)	NR6A1 (ENSMMNG00015019302)	NR5A1 (ENSMMNG00015019244)	ADGRD2 (ENSMMNG00015019194)	PSMB7 (ENSMMNG00015019159)	NEK6 (ENSMMNG00015019045)	ENSMMNG00015018990	ENSMMNG00015018977	ENSMMNG00015018954 #22	DENND1A (ENSMMNG00015018918)	CRB2 (ENSMMNG00015018867)	STRBP (ENSMMNG00015018777)	RABGAP1 (ENSMMNG00015018694)	ZBTB26 (ENSMMNG00015018669)	ZBTB6 (ENSMMNG00015018659)	RC3H2 (ENSMMNG00015018607)	PDCL (ENSMMNG00015018554)	PTGS1 (ENSMMNG00015018448)	MRRF (ENSMMNG00015018364)	RBM18 (ENSMMNG00015018256)	LHX6 (ENSMMNG00015018081)	MORN5 (ENSMMNG00015017987)	NDUFA8 (ENSMMNG00015017957)	TTLL11 (ENSMMNG00015017872)
Sperm whale	MODERN SPECIES	20	HSPA5 (ENSPCTG00005011897)	RABEPK (ENSPCTG00005011943)	PPP6C (ENSPCTG00005012010)	SCAI (ENSPCTG00005012153)	GOLGA1 (ENSPCTG00005012337)	ARPC5L (ENSPCTG00005012408)	RPL35 (ENSPCTG00005012446)	OLFML2A (ENSPCTG00005012507)	NR6A1 (ENSPCTG00005012676)	NR5A1 (ENSPCTG00005013087)	ENSPCTG00005013273	PSMB7 (ENSPCTG00005013513)	LHX2 (ENSPCTG00005013579)	DENND1A (ENSPCTG00005013710)	ENSPCTG00005014157	ENSPCTG00005014200 #22	CRB2 (ENSPCTG00005014259)	STRBP (ENSPCTG00005014427)	RABGAP1 (ENSPCTG00005014497)	ZBTB26 (ENSPCTG00005014658)	ZBTB6 (ENSPCTG00005014671)	RC3H2 (ENSPCTG00005014694)	PDCL (ENSPCTG00005014807)	PTGS1 (ENSPCTG00005015161)	MRRF (ENSPCTG00005015426)	ENSPCTG00005015616	RBM18 (ENSPCTG00005015688)	NDUFA8 (ENSPCTG00005015736)	ENSPCTG00005015821	ENSPCTG00005015853	ENSPCTG00005015883
Blue whale	MODERN SPECIES	17	HSPA5 (ENSBMSG00010002905)	RABEPK (ENSBMSG00010002878)	PPP6C (ENSBMSG00010002860)	SCAI (ENSBMSG00010002823)	GOLGA1 (ENSBMSG00010002753)	ARPC5L (ENSBMSG00010002727)	RPL35 (ENSBMSG00010002712)	WDR38 (ENSBMSG00010002692)	OLFML2A (ENSBMSG00010002654)	NR6A1 (ENSBMSG00010002572)	NR5A1 (ENSBMSG00010002525)	PSMB7 (ENSBMSG00010002486)	NEK6 (ENSBMSG00010002464)	ENSBMSG00010002438	ENSBMSG00010002423	ENSBMSG00010002405 #22	DENND1A (ENSBMSG00010002298)	CRB2 (ENSBMSG00010002237)	STRBP (ENSBMSG00010002189)	RABGAP1 (ENSBMSG00010002113)	ZBTB26 (ENSBMSG00010002083)	ZBTB6 (ENSBMSG00010002076)	RC3H2 (ENSBMSG00010002002)	PDCL (ENSBMSG00010001965)	OR1K1 (ENSBMSG00010001958)	ENSBMSG00010001936	ENSBMSG00010001927	ENSBMSG00010001916	PTGS1 (ENSBMSG00010001760)	MRRF (ENSBMSG00010001690)	RBM18 (ENSBMSG00010001663)
Eulipotyphla	ANCESTRAL SPECIES	33																ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29
Common shrew	MODERN SPECIES	1364																MTFR1L (ENSSARG00000011026) #22	AUNIP (ENSSARG00000011043) #23	ENSSARG00000011053 #24	STMN1 (ENSSARG00000011057) #25	PAFAH2 (ENSSARG00000011062) #26	EXTL1 (ENSSARG00000011101) #27	ENSSARG00000011120 #28	TRIM63 (ENSSARG00000011127) #29
Hedgehog	MODERN SPECIES	1933																MTFR1L (ENSEEUG00000007728) #22
Atlantogenata	ANCESTRAL SPECIES	4	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.c #14	ENSGT00390000017845.d #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37	ENSGT00620000087993.a.b
Xenarthra	ANCESTRAL SPECIES	27	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.c #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23
Sloth	MODERN SPECIES	9631																MTFR1L (ENSCHOG00000004413) #22	AUNIP (ENSCHOG00000004411) #23
Armadillo	MODERN SPECIES	2239	STPG1 (ENSDNOG00000032430) #7	NIPAL3 (ENSDNOG00000014003) #8	RCAN3 (ENSDNOG00000011357) #9	NCMAP (ENSDNOG00000000914) #10	SRRM1 (ENSDNOG00000049141) #11	ENSDNOG00000042215 #12	RUNX3 (ENSDNOG00000043493) #13	SYF2 (ENSDNOG00000047605) #14	ENSDNOG00000035528 #15	TMEM50A (ENSDNOG00000036245) #16	ENSDNOG00000017485 #17	MACO1 (ENSDNOG00000005372) #18	LDLRAP1 (ENSDNOG00000025498) #19	MAN1C1 (ENSDNOG00000046261) #20	SELENON (ENSDNOG00000015062) #21	MTFR1L (ENSDNOG00000015087) #22	AUNIP (ENSDNOG00000044053) #23
Afrotheria	ANCESTRAL SPECIES	15	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.c #14	ENSGT00390000017845.d #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b
Afrotheria_a	ANCESTRAL SPECIES	15	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845.c #14	ENSGT00390000017845.d #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b
Elephant	MODERN SPECIES	332	NIPAL3 (ENSLAFG00000012374) #8	RCAN3 (ENSLAFG00000017638) #9	NCMAP (ENSLAFG00000014893) #10	SRRM1 (ENSLAFG00000013830) #11	CLIC4 (ENSLAFG00000017470) #12	RUNX3 (ENSLAFG00000008382) #13	ENSLAFG00000023150 #14	ENSLAFG00000030814 #14	RSRP1 (ENSLAFG00000022865) #15	TMEM50A (ENSLAFG00000014756) #16	ENSLAFG00000014759 #17	MACO1 (ENSLAFG00000001213) #18	LDLRAP1 (ENSLAFG00000001214) #19	MAN1C1 (ENSLAFG00000004643) #20	SELENON (ENSLAFG00000021561) #21	MTFR1L (ENSLAFG00000002306) #22	AUNIP (ENSLAFG00000022386) #23	PAQR7 (ENSLAFG00000000368) #24	ENSLAFG00000006089 #25	PAFAH2 (ENSLAFG00000008618) #26	EXTL1 (ENSLAFG00000002438) #27	SLC30A2 (ENSLAFG00000002439) #28	TRIM63 (ENSLAFG00000002440) #29	PDIK1L (ENSLAFG00000002444) #30	ZNF593 (ENSLAFG00000022048) #34	CNKSR1 (ENSLAFG00000002445) #35	CATSPER4 (ENSLAFG00000008447) #36	ENSLAFG00000027598 #37	CEP85 (ENSLAFG00000010456)	SH3BGRL3 (ENSLAFG00000012283)	UBXN11 (ENSLAFG00000032458)
Hyrax	MODERN SPECIES	4469															SELENON (ENSPCAG00000013771) #21	MTFR1L (ENSPCAG00000013886) #22	ENSPCAG00000013930 #23
Marsupialia	ANCESTRAL SPECIES	10	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027.a.b	ENSGT00940000164027.a.a	ENSGT00940000164027.b	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599 #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Marsupialia_b	ANCESTRAL SPECIES	4	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027.a.b	ENSGT00940000164027.a.a	ENSGT00940000164027.b	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599.p #35	ENSGT00940000161879 #36	ENSGT00720000109135 #37
Diprotodontia	DUPLICATION
Diprotodontia	ANCESTRAL SPECIES	3	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027.a.b	ENSGT00940000164027.a.a	ENSGT00940000164027.b	ENSGT00390000005972 #21	ENSGT00950000183215.c.b.f #22	ENSGT00950000183215.c.b.e #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599.p #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
Diprotodontia_a	ANCESTRAL SPECIES	4	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027.a.b	ENSGT00940000164027.a.a	ENSGT00940000164027.b	ENSGT00390000005972 #21	ENSGT00950000183215.c.b.e #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599.p #35	ENSGT00940000161879 #36	ENSGT00620000087993.a.b
koala	DUPLICATION
koala	MODERN SPECIES	14	ENSPCIG00000014248 #10	SRRM1 (ENSPCIG00000009214) #11	CLIC4 (ENSPCIG00000014243) #12	RUNX3 (ENSPCIG00000008587) #13	SYF2 (ENSPCIG00000014235) #14	ENSPCIG00000014234 #15	TMEM50A (ENSPCIG00000014232) #16	ENSPCIG00000014231 #17	MACO1 (ENSPCIG00000006939) #18	LDLRAP1 (ENSPCIG00000006938) #19	MAN1C1 (ENSPCIG00000002306) #20	ENSPCIG00000002146	ENSPCIG00000002109	ENSPCIG00000002010	ENSPCIG00000025582 #21	ENSPCIG00000025581 #22	ENSPCIG00000025580 #23	PAQR7 (ENSPCIG00000036363) #24	ENSPCIG00000011888 #25	PAFAH2 (ENSPCIG00000011893) #26	ENSPCIG00000011897 #27	SLC30A2 (ENSPCIG00000011900) #28	TRIM63 (ENSPCIG00000011903) #29	PDIK1L (ENSPCIG00000011906) #30	FAM110D (ENSPCIG00000011907) #31	C1orf232 (ENSPCIG00000033361) #32	ENSPCIG00000017957	ZNF593 (ENSPCIG00000011911) #34	ZNF593OS (ENSPCIG00000011913) #33	ENSPCIG00000031457 #35	ENSPCIG00000010337
koala	MODERN SPECIES	150	ENSPCIG00000025829	ENSPCIG00000025831	ENSPCIG00000025834	ENSPCIG00000032747	CUZD1 (ENSPCIG00000025837)	C10orf88 (ENSPCIG00000025838)	PSTK (ENSPCIG00000025839)	IKZF5 (ENSPCIG00000025840)	ENSPCIG00000025841	HMX3 (ENSPCIG00000025842)	HMX2 (ENSPCIG00000025843)	ENSPCIG00000025845	ENSPCIG00000026830	GPR26 (ENSPCIG00000026831)	CPXM2 (ENSPCIG00000026833)	ENSPCIG00000028203 #22	CHST15 (ENSPCIG00000014522)	ENSPCIG00000009126	ENSPCIG00000009123	ENSPCIG00000009121	ENSPCIG00000009119	SLC16A12 (ENSPCIG00000009112)	ENSPCIG00000002392	ENSPCIG00000034252	KIF20B (ENSPCIG00000000668)	ENSPCIG00000015744	HTR7 (ENSPCIG00000015740)	RPP30 (ENSPCIG00000015730)	ANKRD1 (ENSPCIG00000015723)	PCGF5 (ENSPCIG00000009625)	HECTD2 (ENSPCIG00000016760)
Common wonbat	MODERN SPECIES	1016					SYF2 (ENSVURG00010005081) #14	RSRP1 (ENSVURG00010005092) #15	TMEM50A (ENSVURG00010005114) #16	ENSVURG00010005179 #17	MACO1 (ENSVURG00010006488) #18	ENSVURG00010006509 #19	MAN1C1 (ENSVURG00010006526) #20	ENSVURG00010006541	ENSVURG00010006565	ENSVURG00010006582	ENSVURG00010006587 #21	ENSVURG00010006595 #22	ENSVURG00010006635 #23	PAQR7 (ENSVURG00010006639) #24	ENSVURG00010006642 #25	PAFAH2 (ENSVURG00010006650) #26	EXTL1 (ENSVURG00010006668) #27	SLC30A2 (ENSVURG00010006685) #28	TRIM63 (ENSVURG00010006698) #29	PDIK1L (ENSVURG00010006701) #30	FAM110D (ENSVURG00010006708) #31	ENSVURG00010006717 #34	ZNF593OS (ENSVURG00010006719) #33	ENSVURG00010006726 #35	ENSVURG00010006731 #35	CEP85 (ENSVURG00010006742)	SH3BGRL3 (ENSVURG00010006773)
Diprotodontia	ANCESTRAL SPECIES	3	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598 #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027.a.b	ENSGT00940000164027.a.a	ENSGT00940000164027.b	ENSGT00390000005972 #21	ENSGT00950000183215.c.b.f #22	ENSGT00950000183215.c.b.e #22	ENSGT00390000003280 #23	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT01070000253847 #33	ENSGT00940000159599.p #35	ENSGT00940000161879 #36
Wallaby	MODERN SPECIES	2665																MTFR1L (ENSMEUG00000016175) #22	ENSMEUG00000016185 #23
Diprotodontia_a	ANCESTRAL SPECIES																	ENSGT00950000183215.c.b.f #22
koala	MODERN SPECIES	63	ENSPCIG00000034270	CCDC85A (ENSPCIG00000010231)	EFEMP1 (ENSPCIG00000010235)	PNPT1 (ENSPCIG00000010236)	ENSPCIG00000010238	CFAP36 (ENSPCIG00000010245)	CCDC88A (ENSPCIG00000010379)	ENSPCIG00000036178	ENSPCIG00000010404	MTIF2 (ENSPCIG00000010405)	ENSPCIG00000010408	ENSPCIG00000010410	CLHC1 (ENSPCIG00000010411)	RTN4 (ENSPCIG00000010419)	EML6 (ENSPCIG00000010427)	ENSPCIG00000010431 #22	ENSPCIG00000010434	SPTBN1 (ENSPCIG00000018457)	ENSPCIG00000026925	ENSPCIG00000026924	ENSPCIG00000026923	PSME4 (ENSPCIG00000008643)	GPR75 (ENSPCIG00000008642)	ERLEC1 (ENSPCIG00000007406)	CHAC2 (ENSPCIG00000007404)	ASB3 (ENSPCIG00000007187)	ENSPCIG00000024152	ENSPCIG00000016001	ENSPCIG00000008827	ENSPCIG00000035154	ENSPCIG00000012044
Common wonbat	MODERN SPECIES	695		HS6ST3 (ENSVURG00010023837)	UGGT2 (ENSVURG00010023840)	ENSVURG00010023846	DNAJC3 (ENSVURG00010023847)	DZIP1 (ENSVURG00010023850)	CLDN10 (ENSVURG00010023858)	ENSVURG00010023861	ABCC4 (ENSVURG00010023864)	SOX21 (ENSVURG00010023875)	GPR180 (ENSVURG00010023877)	DCT (ENSVURG00010023878)	GPC6 (ENSVURG00010023883)	ENSVURG00010023888	ENSVURG00010023899	ENSVURG00010023901 #22	ENSVURG00010023902	SLITRK5 (ENSVURG00010023907)	ENSVURG00010023908	ENSVURG00010023910	ENSVURG00010023911	SLITRK6 (ENSVURG00010023913)	ENSVURG00010023917	ENSVURG00010023918	ENSVURG00010023919	SLITRK1 (ENSVURG00010023921)
Tasmanian devil	MODERN SPECIES	2	NIPAL3 (ENSSHAG00000022187) #8	RCAN3 (ENSSHAG00000027558) #9	SRRM1 (ENSSHAG00000011061) #11	CLIC4 (ENSSHAG00000023819) #12	ENSSHAG00000007152 #14	RSRP1 (ENSSHAG00000027987) #15	TMEM50A (ENSSHAG00000027571) #16	ENSSHAG00000007644 #17	MACO1 (ENSSHAG00000008209) #18	LDLRAP1 (ENSSHAG00000009345) #19	MAN1C1 (ENSSHAG00000030914) #20	ENSSHAG00000030486	ENSSHAG00000023982	ENSSHAG00000020846	ENSSHAG00000026081	MTFR1L (ENSSHAG00000008885) #22	ENSSHAG00000021774 #23	PAQR7 (ENSSHAG00000023909) #24	PAFAH2 (ENSSHAG00000006981) #26	EXTL1 (ENSSHAG00000007694) #27	SLC30A2 (ENSSHAG00000008009) #28	ENSSHAG00000027011	TRIM63 (ENSSHAG00000008274) #29	PDIK1L (ENSSHAG00000008792) #30	FAM110D (ENSSHAG00000009170) #31	ZNF593OS (ENSSHAG00000025551) #33	ENSSHAG00000022271 #35	ENSSHAG00000026727 #35	CATSPER4 (ENSSHAG00000009566) #36	ENSSHAG00000009858 #37	CEP85 (ENSSHAG00000010115)
Opossum	MODERN SPECIES	3	NCMAP (ENSMODG00000051523) #10	SRRM1 (ENSMODG00000013861) #11	CLIC4 (ENSMODG00000013939) #12	ENSMODG00000046366	ENSMODG00000013951 #14	RSRP1 (ENSMODG00000013955) #15	TMEM50A (ENSMODG00000038632) #16	ENSMODG00000013982 #17	MACO1 (ENSMODG00000013985) #18	LDLRAP1 (ENSMODG00000013990) #19	ENSMODG00000049139	MAN1C1 (ENSMODG00000013999) #20	ENSMODG00000025591	ENSMODG00000014009	ENSMODG00000037388 #21	MTFR1L (ENSMODG00000014017) #22	ENSMODG00000014020 #23	PAQR7 (ENSMODG00000023911) #24	STMN1 (ENSMODG00000014027) #25	ENSMODG00000028594	PAFAH2 (ENSMODG00000014033) #26	EXTL1 (ENSMODG00000014040) #27	ENSMODG00000040765 #28	TRIM63 (ENSMODG00000014098) #29	ENSMODG00000014091 #28	PDIK1L (ENSMODG00000050352) #30	ENSMODG00000031429	ENSMODG00000014135 #35	CATSPER4 (ENSMODG00000014151) #36	ENSMODG00000048616 #37	CEP85 (ENSMODG00000014186)
Platypus	MODERN SPECIES	7	GRHL3 (ENSOANG00000002207)	ENSOANG00000043369 #7	NIPAL3 (ENSOANG00000036461) #8	RCAN3 (ENSOANG00000002204) #9	SRRM1 (ENSOANG00000002202) #11	ENSOANG00000048682 #11	CLIC4 (ENSOANG00000042082) #12	RUNX3 (ENSOANG00000038359) #13	SYF2 (ENSOANG00000043250) #14	ENSOANG00000009553 #16	ENSOANG00000038655 #17	MACO1 (ENSOANG00000000420) #18	LDLRAP1 (ENSOANG00000040256) #19	MAN1C1 (ENSOANG00000015845) #20	SELENON (ENSOANG00000050433) #21	MTFR1L (ENSOANG00000047049) #22	PAQR7 (ENSOANG00000048248) #24	STMN1 (ENSOANG00000001728) #25	PAFAH2 (ENSOANG00000014900) #26	SLC30A2 (ENSOANG00000014899) #28	TRIM63 (ENSOANG00000014898) #29	ENSOANG00000037789 #31	PDIK1L (ENSOANG00000045542) #30	ENSOANG00000039297 #34	ZNF593OS (ENSOANG00000041281) #33	ENSOANG00000029377 #35	ENSOANG00000001696 #36	CEP85 (ENSOANG00000049594)	SH3BGRL3 (ENSOANG00000046176)	ENSOANG00000007084	ENSOANG00000040174
Sauria	ANCESTRAL SPECIES	23	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b	ENSGT00940000157740
Archelosauria	ANCESTRAL SPECIES	25	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00960000189517	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b
Archosauria	ANCESTRAL SPECIES	22	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00950000183215.c.b #22	ENSGT00960000189517	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b
Aves	ANCESTRAL SPECIES	28	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00950000183215.c.b #22	ENSGT00960000189517	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b
African ostrich	MODERN SPECIES	162								SYF2 (ENSSCUG00000000389) #14	RSRP1 (ENSSCUG00000000392) #15	TMEM50A (ENSSCUG00000000395) #16	ENSSCUG00000000400 #17	MACO1 (ENSSCUG00000000403) #18	LDLRAP1 (ENSSCUG00000000410) #19	MAN1C1 (ENSSCUG00000000415) #20	ENSSCUG00000000418	MTFR1L (ENSSCUG00000000422) #22	ENSSCUG00000000423	PAQR7 (ENSSCUG00000000424) #24	STMN1 (ENSSCUG00000000427) #25	PDIK1L (ENSSCUG00000000430) #30	ENSSCUG00000000432 #35	CEP85 (ENSSCUG00000000434)	SH3BGRL3 (ENSSCUG00000000435)	UBXN11 (ENSSCUG00000000438)
Neognathae	ANCESTRAL SPECIES	26	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00950000183215.c.b #22	ENSGT00960000189517	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b
Galloanserae	ANCESTRAL SPECIES	25	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00950000183215.c.b #22
Anatidae	ANCESTRAL SPECIES	21	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00960000188019	ENSGT00950000183215.c.b #22
Pink-footed goose	MODERN SPECIES	73	RCAN3 (ENSABRG00000012217) #9	NCMAP (ENSABRG00000012194) #10	SRRM1 (ENSABRG00000012156) #11	CLIC4 (ENSABRG00000012147) #12	RUNX3 (ENSABRG00000012142) #13	SYF2 (ENSABRG00000012134) #14	RSRP1 (ENSABRG00000012129) #15	TMEM50A (ENSABRG00000012117) #16	ENSABRG00000012095 #17	MACO1 (ENSABRG00000012082) #18	LDLRAP1 (ENSABRG00000012068) #19	ENSABRG00000012066	MAN1C1 (ENSABRG00000012053) #20	ENSABRG00000012040	ENSABRG00000012037	MTFR1L (ENSABRG00000012032) #22
Duck	MODERN SPECIES	15	STPG1 (ENSAPLG00000003159) #7	NIPAL3 (ENSAPLG00000002628) #8	RCAN3 (ENSAPLG00000002545) #9	NCMAP (ENSAPLG00000002541) #10	SRRM1 (ENSAPLG00000002066) #11	CLIC4 (ENSAPLG00000019742) #12	RUNX3 (ENSAPLG00000016439) #13	SYF2 (ENSAPLG00000016435) #14	RSRP1 (ENSAPLG00000023561) #15	TMEM50A (ENSAPLG00000016434) #16	ENSAPLG00000016375 #17	MACO1 (ENSAPLG00000016308) #18	LDLRAP1 (ENSAPLG00000016262) #19	MAN1C1 (ENSAPLG00000016115) #20	ENSAPLG00000025313	MTFR1L (ENSAPLG00000016018) #22
Phasianidae	ANCESTRAL SPECIES	24	ENSGT00940000157833	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00950000183215.c.b #22	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504	ENSGT00940000160992	ENSGT00940000161085	ENSGT00940000157034	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.e
Phasianidae_b	ANCESTRAL SPECIES	23	ENSGT00940000157833	ENSGT00940000155019.a.a	ENSGT00940000156139.ab	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00950000183215.c.b #22	ENSGT00940000164873	ENSGT00390000002144	ENSGT00410000025596.a.b	ENSGT00940000156761	ENSGT00940000160504	ENSGT00940000160992	ENSGT00940000161085	ENSGT00940000157034	ENSGT00940000157669	ENSGT00940000155543	ENSGT00940000157582	ENSGT00950000183168.B.a	ENSGT00940000160073	ENSGT00940000163923.e	ENSGT00940000163923.f
Turkey	MODERN SPECIES	17	ENSMGAG00000005107	ENSMGAG00000005063	FNDC5 (ENSMGAG00000005049)	ENSMGAG00000005030	ENSMGAG00000005513	AK2 (ENSMGAG00000005006)	AZIN2 (ENSMGAG00000004993)	ENSMGAG00000019031	ENSMGAG00000001477	ENSMGAG00000001550	E2F2 (ENSMGAG00000021602)	ENSMGAG00000001580	ENSMGAG00000001610	ENSMGAG00000001716	ENSMGAG00000001725	ENSMGAG00000001743 #22	ENSMGAG00000018530	ENSMGAG00000001731	ENSMGAG00000001778	ENSMGAG00000001802 #20	ENSMGAG00000021137 #19	MACO1 (ENSMGAG00000001845) #18	ENSMGAG00000001964 #16	ENSMGAG00000001880 #17	ENSMGAG00000002019 #14	ENSMGAG00000002017 #15	ENSMGAG00000017137	ENSMGAG00000020433	ENSMGAG00000002035 #13	ENSMGAG00000019314	ENSMGAG00000002041 #12
Chicken	MODERN SPECIES	15	EPB41 (ENSGALG00010016111)	ENSGALG00010015979	TRNAU1AP (ENSGALG00010015959)	ENSGALG00010015937 #10	SRRM1 (ENSGALG00010015914) #11	CLIC4 (ENSGALG00010015874) #12	RUNX3 (ENSGALG00010015825) #13	SYF2 (ENSGALG00010015803) #14	RSRP1 (ENSGALG00010015793) #15	TMEM50A (ENSGALG00010015769) #16	RHCE (ENSGALG00010015729) #17	TMEM57 (ENSGALG00010015645) #18	LDLRAP1 (ENSGALG00010015605) #19	MAN1C1 (ENSGALG00010015573) #20	SELENON (ENSGALG00010015516)	MTFR1L (ENSGALG00010015486) #22	ENSGALG00010015440	TAF12 (ENSGALG00010015384)	GMEB1 (ENSGALG00010015314)	ENSGALG00010015248	YTHDF2 (ENSGALG00010015166)	ENSGALG00010015185	ID3 (ENSGALG00010016447)	E2F2 (ENSGALG00010016567)	ASAP3 (ENSGALG00010016556)	TCEA3 (ENSGALG00010016543)	OPRD1 (ENSGALG00010016944)	RCC1 (ENSGALG00010016936)	PHACTR4 (ENSGALG00010016925)	SESN2 (ENSGALG00010016875)	FAM76A (ENSGALG00010018339)
Japanese quail	MODERN SPECIES	15	ENSCJPG00005016339	EPB41 (ENSCJPG00005016336)	ENSCJPG00005016335	TRNAU1AP (ENSCJPG00005016311)	SRRM1 (ENSCJPG00005016306) #11	CLIC4 (ENSCJPG00005016305) #12	RUNX3 (ENSCJPG00005016304) #13	SYF2 (ENSCJPG00005016303) #14	RSRP1 (ENSCJPG00005016302) #15	TMEM50A (ENSCJPG00005016301) #16	ENSCJPG00005016300 #17	MACO1 (ENSCJPG00005016299) #18	LDLRAP1 (ENSCJPG00005016298) #19	MAN1C1 (ENSCJPG00005016273) #20	ENSCJPG00005016272	MTFR1L (ENSCJPG00005016271) #22	ENSCJPG00005016270	TAF12 (ENSCJPG00005016269)	ENSCJPG00005016267	GMEB1 (ENSCJPG00005016263)	YTHDF2 (ENSCJPG00005016262)	ENSCJPG00005016261	ID3 (ENSCJPG00005016260)	E2F2 (ENSCJPG00005016258)	ASAP3 (ENSCJPG00005016116)	TCEA3 (ENSCJPG00005016106)	OPRD1 (ENSCJPG00005016105)	RCC1 (ENSCJPG00005016103)	PHACTR4 (ENSCJPG00005016101)	SESN2 (ENSCJPG00005016100)	FAM76A (ENSCJPG00005016099)
Neognathae_b	ANCESTRAL SPECIES	26	ENSGT00940000157970	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00950000183215.c.b #22	ENSGT00960000189517	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00390000004173 #34	ENSGT00990000210621	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260
Passeriformes	ANCESTRAL SPECIES	23	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00390000004173 #34	ENSGT00990000210621	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b
Great tit	MODERN SPECIES	15														MAN1C1 (ENSPMJG00000017982) #20	ENSPMJG00000017983	MTFR1L (ENSPMJG00000017984) #22	PAQR7 (ENSPMJG00000017986) #24	STMN1 (ENSPMJG00000017987) #25	PAFAH2 (ENSPMJG00000017988) #26	ENSPMJG00000017989	SLC30A2 (ENSPMJG00000017990) #28	TRIM63 (ENSPMJG00000017991) #29	PDIK1L (ENSPMJG00000017992) #30	ZNF593 (ENSPMJG00000017994) #34	CNKSR1 (ENSPMJG00000017995) #35	CEP85 (ENSPMJG00000017996)	SH3BGRL3 (ENSPMJG00000017997)	ENSPMJG00000017998	CRYBG2 (ENSPMJG00000017999)	LIN28A (ENSPMJG00000018000)	DHDDS (ENSPMJG00000018001)
Passeriformes_d	ANCESTRAL SPECIES	23	ENSGT00940000157970	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.s #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00390000004173 #34	ENSGT00990000210621	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b	ENSGT00940000157740
Passeriformes_g	ANCESTRAL SPECIES	22	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.s #11	ENSGT00730000111080.b.t #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000161960 #27	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00390000004173 #34	ENSGT00990000210621	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b	ENSGT00940000157740
Passeroidea	ANCESTRAL SPECIES	22	ENSGT00940000157970	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b.s #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00950000183215.c.b #22	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00390000004173 #34	ENSGT00990000210621	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b	ENSGT00940000157740	ENSGT00960000189661
Zebra finch	MODERN SPECIES	16	ENSTGUG00000001157	NIPAL3 (ENSTGUG00000001149) #8	RCAN3 (ENSTGUG00000001146) #9	ENSTGUG00000022746 #10	ENSTGUG00000022132 #11	CLIC4 (ENSTGUG00000026827) #12	RUNX3 (ENSTGUG00000001130) #13	SYF2 (ENSTGUG00000001126) #14	RSRP1 (ENSTGUG00000001124) #15	TMEM50A (ENSTGUG00000001117) #16	ENSTGUG00000001107 #17	MACO1 (ENSTGUG00000001102) #18	LDLRAP1 (ENSTGUG00000001098) #19	MAN1C1 (ENSTGUG00000001087) #20	SELENON (ENSTGUG00000001083)	MTFR1L (ENSTGUG00000001075) #22	STMN1 (ENSTGUG00000017327) #25	ENSTGUG00000025337	SLC30A2 (ENSTGUG00000001069) #28	TRIM63 (ENSTGUG00000001060) #29	PDIK1L (ENSTGUG00000026676) #30	FAM110D (ENSTGUG00000018788) #31	ZNF593 (ENSTGUG00000001050) #34	CNKSR1 (ENSTGUG00000020656) #35	CEP85 (ENSTGUG00000001041)	ENSTGUG00000001040	UBXN11 (ENSTGUG00000001039)	CRYBG2 (ENSTGUG00000001038)	LIN28A (ENSTGUG00000021101)	DHDDS (ENSTGUG00000001032)	RPS6KA1 (ENSTGUG00000001002)
Common canary	MODERN SPECIES	65	NIPAL3 (ENSSCAG00000006921) #8	RCAN3 (ENSSCAG00000006926) #9	NCMAP (ENSSCAG00000006928) #10	ENSSCAG00000006931 #11	ENSSCAG00000006941 #11	CLIC4 (ENSSCAG00000006957) #12	RUNX3 (ENSSCAG00000006962) #13	SYF2 (ENSSCAG00000006965) #14	RSRP1 (ENSSCAG00000006970) #15	ENSSCAG00000006971	ENSSCAG00000006975 #17	MACO1 (ENSSCAG00000006983) #18	LDLRAP1 (ENSSCAG00000007039) #19	MAN1C1 (ENSSCAG00000007042) #20	ENSSCAG00000007047	MTFR1L (ENSSCAG00000007053) #22	STMN1 (ENSSCAG00000007058) #25	PAFAH2 (ENSSCAG00000007063) #26	ENSSCAG00000007069	SLC30A2 (ENSSCAG00000007078) #28	TRIM63 (ENSSCAG00000007098) #29	PDIK1L (ENSSCAG00000007101) #30	ZNF593 (ENSSCAG00000007103) #34	ENSSCAG00000007105	CNKSR1 (ENSSCAG00000007106) #35	CEP85 (ENSSCAG00000007111)	ENSSCAG00000007116	SH3BGRL3 (ENSSCAG00000007120)	CRYBG2 (ENSSCAG00000007125)	ENSSCAG00000007132	LIN28A (ENSSCAG00000007133)
Medium ground finch	MODERN SPECIES	139	GRHL3 (ENSGFOG00000007814)	NIPAL3 (ENSGFOG00000007801) #8	RCAN3 (ENSGFOG00000007794) #9	NCMAP (ENSGFOG00000007786) #10	SRRM1 (ENSGFOG00000007771) #11	CLIC4 (ENSGFOG00000007758) #12	RUNX3 (ENSGFOG00000007751) #13	ENSGFOG00000007742 #13	SYF2 (ENSGFOG00000007737) #14	TMEM50A (ENSGFOG00000007733) #16	ENSGFOG00000007723 #17	MACO1 (ENSGFOG00000007710) #18	LDLRAP1 (ENSGFOG00000007702) #19	MAN1C1 (ENSGFOG00000007691) #20	SELENON (ENSGFOG00000007663) #21	MTFR1L (ENSGFOG00000007652) #22	PAQR7 (ENSGFOG00000007647) #24	STMN1 (ENSGFOG00000007634) #25	PAFAH2 (ENSGFOG00000007625) #26	EXTL1 (ENSGFOG00000007438) #27	SLC30A2 (ENSGFOG00000007412) #28	TRIM63 (ENSGFOG00000007402) #29	PDIK1L (ENSGFOG00000007398) #30	CEP85 (ENSGFOG00000007372)	SH3BGRL3 (ENSGFOG00000007392)	ENSGFOG00000007363	LIN28A (ENSGFOG00000007352)	DHDDS (ENSGFOG00000007344)	ENSGFOG00000007336	RPS6KA1 (ENSGFOG00000006433)	ARID1A (ENSGFOG00000006335)
Flycatcher	MODERN SPECIES	15	NIPAL3 (ENSFALG00000000487) #8	RCAN3 (ENSFALG00000000481) #9	ENSFALG00000027539 #10	ENSFALG00000027500 #11	CLIC4 (ENSFALG00000000472) #12	RUNX3 (ENSFALG00000000470) #13	SYF2 (ENSFALG00000024367) #14	ENSFALG00000000465 #15	TMEM50A (ENSFALG00000000455) #16	ENSFALG00000000454 #17	MACO1 (ENSFALG00000000444) #18	ENSFALG00000000419 #25	ENSFALG00000025362 ##19	MAN1C1 (ENSFALG00000000434) #20	ENSFALG00000000425	MTFR1L (ENSFALG00000025744) #22	PAQR7 (ENSFALG00000000421) #24	PAFAH2 (ENSFALG00000000417) #26	ENSFALG00000000414	SLC30A2 (ENSFALG00000000410) #28	TRIM63 (ENSFALG00000000405) #29	PDIK1L (ENSFALG00000023797) #30	FAM110D (ENSFALG00000026288) #31	ZNF593 (ENSFALG00000000396) #34	CEP85 (ENSFALG00000000387)	SH3BGRL3 (ENSFALG00000000385)	UBXN11 (ENSFALG00000000383)	LIN28A (ENSFALG00000028642)	DHDDS (ENSFALG00000025419)	ENSFALG00000027293	RPS6KA1 (ENSFALG00000000347)
Neognathae_c	ANCESTRAL SPECIES	31	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00990000212016	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00950000183215.c.b #22	ENSGT00960000189517	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00390000004173 #34	ENSGT00990000210621	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b
Kakapo	MODERN SPECIES	6	NIPAL3 (ENSSHBG00005005852) #8	RCAN3 (ENSSHBG00005005886) #9	NCMAP (ENSSHBG00005005900) #10	SRRM1 (ENSSHBG00005005936) #11	CLIC4 (ENSSHBG00005005956) #12	RUNX3 (ENSSHBG00005005970) #13	ENSSHBG00005005984	SYF2 (ENSSHBG00005005999) #14	RSRP1 (ENSSHBG00005006017) #15	TMEM50A (ENSSHBG00005006030) #16	ENSSHBG00005006053 #17	MACO1 (ENSSHBG00005006097) #18	LDLRAP1 (ENSSHBG00005006122) #19	MAN1C1 (ENSSHBG00005006149) #20	ENSSHBG00005006191	MTFR1L (ENSSHBG00005006204) #22	STMN1 (ENSSHBG00005006218) #25	PAQR7 (ENSSHBG00005006235) #24	ENSSHBG00005006251	SLC30A2 (ENSSHBG00005006276) #28	TRIM63 (ENSSHBG00005006297) #29	PDIK1L (ENSSHBG00005006321) #30	FAM110D (ENSSHBG00005006339) #31	ZNF593 (ENSSHBG00005006370) #34	ENSSHBG00005006381	CNKSR1 (ENSSHBG00005006401) #35	RLF (ENSSHBG00005006421)	ZMPSTE24 (ENSSHBG00005006439)	ENSSHBG00005006470	RNF19B (ENSSHBG00005006496)	AK2 (ENSSHBG00005006521)
Golden eagle	MODERN SPECIES	7	NIPAL3 (ENSACCG00020008846) #8	RCAN3 (ENSACCG00020008867) #9	NCMAP (ENSACCG00020008894) #10	SRRM1 (ENSACCG00020008955) #11	CLIC4 (ENSACCG00020008992) #12	RUNX3 (ENSACCG00020009015) #13	ENSACCG00020009025	SYF2 (ENSACCG00020009036) #14	RSRP1 (ENSACCG00020009050) #15	TMEM50A (ENSACCG00020009075) #16	ENSACCG00020009090 #17	MACO1 (ENSACCG00020009110) #18	LDLRAP1 (ENSACCG00020009133) #19	MAN1C1 (ENSACCG00020009149) #20	ENSACCG00020009173	MTFR1L (ENSACCG00020009202) #22	ENSACCG00020009212	PAQR7 (ENSACCG00020009220) #24	STMN1 (ENSACCG00020009230) #25	PAFAH2 (ENSACCG00020009240) #26	ENSACCG00020009266	SLC30A2 (ENSACCG00020009298) #28	TRIM63 (ENSACCG00020009313) #29	PDIK1L (ENSACCG00020009329) #30	FAM110D (ENSACCG00020009331) #31	ZNF593 (ENSACCG00020009347) #34	CNKSR1 (ENSACCG00020009382) #35	CEP85 (ENSACCG00020009410)	SH3BGRL3 (ENSACCG00020009422)	UBXN11 (ENSACCG00020009440)	ENSACCG00020009465
Australian saltwater crocodile	MODERN SPECIES	57	NCMAP (ENSCPRG00005016669) #10	SRRM1 (ENSCPRG00005016672) #11	ENSCPRG00005016682	CLIC4 (ENSCPRG00005016689) #12	ENSCPRG00005016698	RUNX3 (ENSCPRG00005016703) #13	ENSCPRG00005016707	SYF2 (ENSCPRG00005016709) #14	RSRP1 (ENSCPRG00005016713) #15	TMEM50A (ENSCPRG00005016717) #16	ENSCPRG00005016721 #17	MACO1 (ENSCPRG00005016725) #18	LDLRAP1 (ENSCPRG00005016731) #19	MAN1C1 (ENSCPRG00005016746) #20	ENSCPRG00005016779	MTFR1L (ENSCPRG00005016787) #22	PAQR7 (ENSCPRG00005016793) #24	ENSCPRG00005016796 #25	PAFAH2 (ENSCPRG00005016800) #26	PTPRU (ENSCPRG00005016817)	MECR (ENSCPRG00005016880)	SRSF4 (ENSCPRG00005016886)	ENSCPRG00005016892	TMEM200B (ENSCPRG00005016909)	EPB41 (ENSCPRG00005017040)	ENSCPRG00005017414	TRNAU1AP (ENSCPRG00005017458)	TAF12 (ENSCPRG00005017465)	RAB42 (ENSCPRG00005017467)	ENSCPRG00005017470	ENSCPRG00005017479
Cryptodira	ANCESTRAL SPECIES	31	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00960000189517	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b	ENSGT00940000157740
Testudinoidea	ANCESTRAL SPECIES	27	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00960000189517	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00390000004173 #34	ENSGT00940000159599.e #35	ENSGT00390000006975.b	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b
Emydidae	ANCESTRAL SPECIES	39	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00960000189517	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00390000004173 #34	ENSGT00940000159599.e #35	ENSGT00390000006975.b	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b
Three-toed box turtle	MODERN SPECIES	111	STPG1 (ENSTMTG00000013540) #7	NIPAL3 (ENSTMTG00000013519) #8	RCAN3 (ENSTMTG00000013505) #9	NCMAP (ENSTMTG00000013496) #10	CLIC4 (ENSTMTG00000013478) #12	RUNX3 (ENSTMTG00000013465) #13	SYF2 (ENSTMTG00000013454) #14	RSRP1 (ENSTMTG00000013446) #15	TMEM50A (ENSTMTG00000013423) #16	ENSTMTG00000013406 #17	MACO1 (ENSTMTG00000013398) #18	LDLRAP1 (ENSTMTG00000013386) #19	MAN1C1 (ENSTMTG00000013350) #20	ENSTMTG00000013338	ENSTMTG00000013326 #21	MTFR1L (ENSTMTG00000013313) #22	ENSTMTG00000013303	PAQR7 (ENSTMTG00000013299) #24	STMN1 (ENSTMTG00000013293) #25	PAFAH2 (ENSTMTG00000013270) #26	ENSTMTG00000013218	SLC30A2 (ENSTMTG00000012854) #28	TRIM63 (ENSTMTG00000012784) #29	PDIK1L (ENSTMTG00000012778) #30	FAM110D (ENSTMTG00000012763) #31	ZNF593 (ENSTMTG00000012756) #34	CNKSR1 (ENSTMTG00000012725) #35	ENSTMTG00000012713	CEP85 (ENSTMTG00000012688)	SH3BGRL3 (ENSTMTG00000012684)	UBXN11 (ENSTMTG00000012576)
painted turtle	MODERN SPECIES	757	GRHL3 (ENSCPBG00000025098)	STPG1 (ENSCPBG00000025093) #7	NIPAL3 (ENSCPBG00000025090) #8	RCAN3 (ENSCPBG00000025089) #9	NCMAP (ENSCPBG00000025086) #10	SRRM1 (ENSCPBG00000025083) #11	CLIC4 (ENSCPBG00000025078) #12	RUNX3 (ENSCPBG00000025074) #13	SYF2 (ENSCPBG00000025073) #14	RSRP1 (ENSCPBG00000025072) #15	TMEM50A (ENSCPBG00000025071) #16	ENSCPBG00000025069 #17	MACO1 (ENSCPBG00000025064) #18	LDLRAP1 (ENSCPBG00000025060) #19	MAN1C1 (ENSCPBG00000025055) #20	MTFR1L (ENSCPBG00000025052) #22	ENSCPBG00000025050	STMN1 (ENSCPBG00000025048) #25	PAFAH2 (ENSCPBG00000025044) #26	ENSCPBG00000025041	SLC30A2 (ENSCPBG00000025040) #28	TRIM63 (ENSCPBG00000025038) #29	PDIK1L (ENSCPBG00000025037) #30	FAM110D (ENSCPBG00000025036) #31	ZNF593 (ENSCPBG00000025034) #34	ENSCPBG00000025033	ENSCPBG00000025025 #35	CEP85 (ENSCPBG00000025023)	SH3BGRL3 (ENSCPBG00000025022)	UBXN11 (ENSCPBG00000025020)	CRYBG2 (ENSCPBG00000025018)
Testudinidae	ANCESTRAL SPECIES	4	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00960000189517	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00390000004173 #34	ENSGT00940000159599.e #35	ENSGT00940000159599.f #35	ENSGT00390000006975.b	ENSGT00620000087993.a.b	ENSGT00940000157260
Goode s thornscrub tortoise	MODERN SPECIES	12	STPG1 (ENSGEVG00005021179) #7	NIPAL3 (ENSGEVG00005021180) #8	RCAN3 (ENSGEVG00005021183) #9	ENSGEVG00005021184	SRRM1 (ENSGEVG00005021189) #11	CLIC4 (ENSGEVG00005021192) #12	RUNX3 (ENSGEVG00005021193) #13	SYF2 (ENSGEVG00005021196) #14	RSRP1 (ENSGEVG00005021197) #15	TMEM50A (ENSGEVG00005021200) #16	ENSGEVG00005021204 #17	MACO1 (ENSGEVG00005021206) #18	LDLRAP1 (ENSGEVG00005021210) #19	MAN1C1 (ENSGEVG00005021213) #20	ENSGEVG00005021214	MTFR1L (ENSGEVG00005021216) #22	ENSGEVG00005021217	PAQR7 (ENSGEVG00005021219) #24	STMN1 (ENSGEVG00005021220) #25	PAFAH2 (ENSGEVG00005021222) #26	ENSGEVG00005021225	SLC30A2 (ENSGEVG00005021228) #28	TRIM63 (ENSGEVG00005021229) #29	PDIK1L (ENSGEVG00005021230) #30	FAM110D (ENSGEVG00005021232) #31	ZNF593 (ENSGEVG00005021233) #34	ENSGEVG00005021234 #35	ENSGEVG00005021235 #35	ENSGEVG00005021236	CEP85 (ENSGEVG00005021237)	SH3BGRL3 (ENSGEVG00005021239)
Abingdon island giant tortoise	MODERN SPECIES	2225															ENSCABG00000010605 #21	MTFR1L (ENSCABG00000010603) #22	PAQR7 (ENSCABG00000010602) #24	STMN1 (ENSCABG00000010601) #25	PAFAH2 (ENSCABG00000010600) #26	ENSCABG00000010599	SLC30A2 (ENSCABG00000010597) #28	TRIM63 (ENSCABG00000010592) #29	PDIK1L (ENSCABG00000010590) #30	FAM110D (ENSCABG00000010587) #31	ZNF593 (ENSCABG00000010585) #34	ENSCABG00000010580 #35	ENSCABG00000010576 #35	CEP85 (ENSCABG00000010561)	SH3BGRL3 (ENSCABG00000010556)	ENSCABG00000010555	CRYBG2 (ENSCABG00000010552)
Chinese turtle	MODERN SPECIES	870													LDLRAP1 (ENSPSIG00000008078) #19	MAN1C1 (ENSPSIG00000008316) #20	ENSPSIG00000008701	MTFR1L (ENSPSIG00000008979) #22	PAQR7 (ENSPSIG00000000483) #24	STMN1 (ENSPSIG00000009455) #25	PAFAH2 (ENSPSIG00000009612) #26	ENSPSIG00000009880	SLC30A2 (ENSPSIG00000010087) #28	TRIM63 (ENSPSIG00000010170) #29	PDIK1L (ENSPSIG00000010652) #30	ZNF593 (ENSPSIG00000010659) #34
Lepidosauria	ANCESTRAL SPECIES	18	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b	ENSGT00940000157740
Episquamata	ANCESTRAL SPECIES	7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b	ENSGT00940000157740
Toxicofera	ANCESTRAL SPECIES	24	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b	ENSGT00940000157740
Elapidae	ANCESTRAL SPECIES	9	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b	ENSGT00940000157740	ENSGT00940000153295.a
Elapidae_a	ANCESTRAL SPECIES	15	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b	ENSGT00940000157740	ENSGT00940000153295.a
Acanthophiinae	ANCESTRAL SPECIES	22	ENSGT00390000011598 #7	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT00390000017845 #14	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00390000005972 #21	ENSGT00950000183215.c.b #22	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b	ENSGT00940000157740	ENSGT00940000153295.a
Eastern brown snake	MODERN SPECIES	19	NIPAL3 (ENSPTXG00000005620) #8	RCAN3 (ENSPTXG00000005619) #9	NCMAP (ENSPTXG00000005618) #10	SRRM1 (ENSPTXG00000005617) #11	CLIC4 (ENSPTXG00000005616) #12	RUNX3 (ENSPTXG00000005594) #13	SYF2 (ENSPTXG00000005593) #14	ENSPTXG00000005592	TMEM50A (ENSPTXG00000005591) #16	ENSPTXG00000005590 #17	MACO1 (ENSPTXG00000005589) #18	LDLRAP1 (ENSPTXG00000005587) #19	MAN1C1 (ENSPTXG00000005585) #20	ENSPTXG00000005584	ENSPTXG00000005583 #21	MTFR1L (ENSPTXG00000005582) #22	PAQR7 (ENSPTXG00000005581) #24	STMN1 (ENSPTXG00000005580) #25	PAFAH2 (ENSPTXG00000005577) #26	ENSPTXG00000005576	SLC30A2 (ENSPTXG00000005575) #28	TRIM63 (ENSPTXG00000005573) #29	PDIK1L (ENSPTXG00000005572) #30	FAM110D (ENSPTXG00000005570) #31	ZNF593 (ENSPTXG00000005569) #34	ENSPTXG00000005567 #35	CEP85 (ENSPTXG00000005565)	SH3BGRL3 (ENSPTXG00000005564)	ENSPTXG00000005561	CRYBG2 (ENSPTXG00000005512)	LIN28A (ENSPTXG00000005511)
Mainland tiger snake	MODERN SPECIES	80				GRHL3 (ENSNSUG00000013000)	NIPAL3 (ENSNSUG00000013018) #8	RCAN3 (ENSNSUG00000013019) #9	SRRM1 (ENSNSUG00000013021) #11	CLIC4 (ENSNSUG00000013023) #12	RUNX3 (ENSNSUG00000013025) #13	TMEM50A (ENSNSUG00000013038) #16	ENSNSUG00000013040 #17	MACO1 (ENSNSUG00000013810) #18	LDLRAP1 (ENSNSUG00000013812) #19	MAN1C1 (ENSNSUG00000013814) #20	ENSNSUG00000013816 #21	MTFR1L (ENSNSUG00000013818) #22	PAQR7 (ENSNSUG00000013820) #24	STMN1 (ENSNSUG00000013821) #25	PAFAH2 (ENSNSUG00000013822) #26	ENSNSUG00000013823	SLC30A2 (ENSNSUG00000013824) #28	TRIM63 (ENSNSUG00000013825) #29	PDIK1L (ENSNSUG00000013826) #30	FAM110D (ENSNSUG00000013827) #31	ZNF593 (ENSNSUG00000013828) #34	CNKSR1 (ENSNSUG00000013829) #35	ENSNSUG00000013830	SH3BGRL3 (ENSNSUG00000013831)	ENSNSUG00000013832	CRYBG2 (ENSNSUG00000013834)	LIN28A (ENSNSUG00000013847)
Blue-lipped sea krait	MODERN SPECIES	8935																MTFR1L (ENSLLTG00000008259) #22
Indian cobra	MODERN SPECIES	11	NIPAL3 (ENSNNAG00000007183) #8	RCAN3 (ENSNNAG00000007243) #9	NCMAP (ENSNNAG00000007263) #10	ENSNNAG00000007281 #11	ENSNNAG00000007299	CLIC4 (ENSNNAG00000007318) #12	RUNX3 (ENSNNAG00000007339) #13	SYF2 (ENSNNAG00000007366) #14	TMEM50A (ENSNNAG00000007409) #16	ENSNNAG00000007432 #17	MACO1 (ENSNNAG00000007460) #18	LDLRAP1 (ENSNNAG00000007488) #19	MAN1C1 (ENSNNAG00000007503) #20	ENSNNAG00000007566	ENSNNAG00000007629 #21	MTFR1L (ENSNNAG00000007649) #22	PAQR7 (ENSNNAG00000007699) #24	STMN1 (ENSNNAG00000007722) #25	PAFAH2 (ENSNNAG00000007761) #26	ENSNNAG00000007820	SLC30A2 (ENSNNAG00000007864) #28	TRIM63 (ENSNNAG00000007925) #29	PDIK1L (ENSNNAG00000007983) #30	FAM110D (ENSNNAG00000007999) #31	ZNF593 (ENSNNAG00000008007) #34	CNKSR1 (ENSNNAG00000008029) #35	CEP85 (ENSNNAG00000008095)	SH3BGRL3 (ENSNNAG00000008164)	ENSNNAG00000008206	LIN28A (ENSNNAG00000008410)	DHDDS (ENSNNAG00000008433)
Lizard	MODERN SPECIES	1092														MAN1C1 (ENSACAG00000017826) #20	ENSACAG00000029958	MTFR1L (ENSACAG00000017821) #22	PAQR7 (ENSACAG00000017818) #24	STMN1 (ENSACAG00000040024) #25	PAFAH2 (ENSACAG00000017809) #26	ENSACAG00000017804	SLC30A2 (ENSACAG00000017801) #28	TRIM63 (ENSACAG00000017791) #29	PDIK1L (ENSACAG00000044651) #30	FAM110D (ENSACAG00000017788) #31	C1orf232 (ENSACAG00000040513) #32	ZNF593 (ENSACAG00000017787) #34	CNKSR1 (ENSACAG00000017781) #35	CEP85 (ENSACAG00000017774)	SH3BGRL3 (ENSACAG00000017773)	ENSACAG00000040159	ENSACAG00000017767
Laterata	ANCESTRAL SPECIES	27	ENSGT00940000158233 #8	ENSGT00940000159501 #9	ENSGT00390000004116 #10	ENSGT00730000111080.b #11	ENSGT00940000155017 #12	ENSGT00940000156598.l #13	ENSGT01040000244696	ENSGT00390000017845 #14	ENSGT00730000111390 #15	ENSGT00940000157715 #16	ENSGT00950000182844.a.b #17	ENSGT00390000016613.c #18	ENSGT00940000157118.c.a #19	ENSGT00940000159312 #20	ENSGT00940000164027	ENSGT00950000183215.c.b #22	ENSGT00940000161438 #24	ENSGT01030000234597.a.a #25	ENSGT00390000005233.a #26	ENSGT00940000163960	ENSGT00940000156072 #28	ENSGT00940000156529 #29	ENSGT00940000158412 #30	ENSGT00950000183056.A.a #31	ENSGT00530000067301 #32	ENSGT00390000004173 #34	ENSGT00940000159599 #35	ENSGT00620000087993.a.b	ENSGT00940000157260	ENSGT00520000055567.b	ENSGT00940000157740
Common wall lizard	MODERN SPECIES	16	RCAN3 (ENSPMRG00000008462) #9	ENSPMRG00000008456	SRRM1 (ENSPMRG00000008427) #11	CLIC4 (ENSPMRG00000008403) #12	ENSPMRG00000008397	RUNX3 (ENSPMRG00000008387) #13	ENSPMRG00000008380	SYF2 (ENSPMRG00000008369) #14	RSRP1 (ENSPMRG00000008360) #15	TMEM50A (ENSPMRG00000008331) #16	ENSPMRG00000008283 #17	MACO1 (ENSPMRG00000008268) #18	LDLRAP1 (ENSPMRG00000008249) #19	MAN1C1 (ENSPMRG00000008227) #20	ENSPMRG00000008220	MTFR1L (ENSPMRG00000008209) #22	ENSPMRG00000008206	PAQR7 (ENSPMRG00000008201) #24	STMN1 (ENSPMRG00000008189) #25	PAFAH2 (ENSPMRG00000008169) #26	ENSPMRG00000008148	SLC30A2 (ENSPMRG00000008136) #28	TRIM63 (ENSPMRG00000008129) #29	PDIK1L (ENSPMRG00000008122) #30	FAM110D (ENSPMRG00000009795) #31	C1orf232 (ENSPMRG00000009786) #32	ZNF593 (ENSPMRG00000009781) #34	CNKSR1 (ENSPMRG00000009769) #35	CEP85 (ENSPMRG00000009750)	SH3BGRL3 (ENSPMRG00000009739)	ENSPMRG00000009727
Argentine black and white tegu	MODERN SPECIES	53	NIPAL3 (ENSSMRG00000001351) #8	RCAN3 (ENSSMRG00000001350) #9	NCMAP (ENSSMRG00000001348) #10	SRRM1 (ENSSMRG00000001330) #11	CLIC4 (ENSSMRG00000001327) #12	RUNX3 (ENSSMRG00000001311) #13	ENSSMRG00000001293	SYF2 (ENSSMRG00000001291) #14	RSRP1 (ENSSMRG00000001267) #15	TMEM50A (ENSSMRG00000001263) #16	ENSSMRG00000001254 #17	MACO1 (ENSSMRG00000001227) #18	LDLRAP1 (ENSSMRG00000001220) #19	MAN1C1 (ENSSMRG00000001206) #20	ENSSMRG00000001114	MTFR1L (ENSSMRG00000001098) #22	STMN1 (ENSSMRG00000001094) #25	PAFAH2 (ENSSMRG00000001086) #26	ENSSMRG00000001080	SLC30A2 (ENSSMRG00000001073) #28	TRIM63 (ENSSMRG00000001069) #29	PDIK1L (ENSSMRG00000001065) #30	FAM110D (ENSSMRG00000001062) #31	C1orf232 (ENSSMRG00000001060) #32	ZNF593 (ENSSMRG00000001058) #34	HMGCL (ENSSMRG00000001053)	FUCA1 (ENSSMRG00000001045)	CNR2 (ENSSMRG00000001041)	PNRC2 (ENSSMRG00000001028)	SRSF10 (ENSSMRG00000001023)
tuatara	MODERN SPECIES	366						SYF2 (ENSSPUG00000005251) #14	ENSSPUG00000005242	ENSSPUG00000005222 #16	ENSSPUG00000005213 #17	MACO1 (ENSSPUG00000005201) #18	LDLRAP1 (ENSSPUG00000005185) #19	ENSSPUG00000005176	MAN1C1 (ENSSPUG00000005150) #20	ENSSPUG00000005141	ENSSPUG00000005131 #21	MTFR1L (ENSSPUG00000005121) #22	PAQR7 (ENSSPUG00000005113) #24	STMN1 (ENSSPUG00000005094) #25	PAFAH2 (ENSSPUG00000005046) #26	ENSSPUG00000005023	ENSSPUG00000004991 #28	ENSSPUG00000004985 #28	TRIM63 (ENSSPUG00000004970) #29