Gnathostomata DUPLICATION Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES 88 ENSGT00940000154533.b ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00940000165390 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521 #26 Euteleostomi ANCESTRAL SPECIES 31 ENSGT00940000154533.b ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00940000165390 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000158887 ENSGT00940000166747 Sarcopterygii ANCESTRAL SPECIES 14 ENSGT00940000154533.b.d ENSGT00940000154533.b.c.a ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000181625 ENSGT00940000157521.b #26 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000166747 Tetrapoda ANCESTRAL SPECIES 6 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000170936 Amniota ANCESTRAL SPECIES 6 ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT01000000220430 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000166747 Mammalia ANCESTRAL SPECIES 6 ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT01000000220430 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000166747 ENSGT00940000155324 #35 Theria ANCESTRAL SPECIES 5 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000166747 ENSGT00940000155324 #35 Eutheria ANCESTRAL SPECIES 10 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 Boreoeutheria ANCESTRAL SPECIES 14 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT01050000244986.b.b ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Euarchontoglires ANCESTRAL SPECIES 14 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT01050000244986.b.b ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Primates ANCESTRAL SPECIES 13 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT01050000244986.b.b ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 Haplorrhini ANCESTRAL SPECIES 10 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT01050000244986.b.b ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 Simiiformes ANCESTRAL SPECIES 15 ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000154530.r.b.b ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000008527.k.a.d ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 16 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00910000147393 ENSGT00530000063686.a.b #10 ENSGT00940000154530.r.b.b ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00910000146654 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 ENSGT00910000147897 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000008527.k.a.d ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Cercopithecidae ANCESTRAL SPECIES 13 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00910000147393 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00940000153201.j.k.b ##12 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00910000146654 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 ENSGT00910000147897 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00940000159262 #31 ENSGT00940000163355 ENSGT00940000153434.a.b.b ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Cercopithecinae ANCESTRAL SPECIES 11 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00910000147393 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00940000153201.j.k.a.a.b.a.b #12 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00910000146654 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 ENSGT00910000147897 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862.i.a #29 ENSGT00940000159262 #31 ENSGT00940000163355 ENSGT00940000153434.a.b.b ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Vervet Monkey MODERN SPECIES 1 RIF1 (ENSCSAG00000016089) #7 TNFAIP6 (ENSCSAG00000016095) #8 NMI (ENSCSAG00000016102) #9 RBM43 (ENSCSAG00000016105) #10 RND3 (ENSCSAG00000016117) #11 ENSCSAG00000016123 #12 MMADHC (ENSCSAG00000016144) #13 LYPD6 (ENSCSAG00000016149) #14 LYPD6B (ENSCSAG00000016151) #15 KIF5C (ENSCSAG00000016159) #16 ENSCSAG00000018645 #17 EPC2 (ENSCSAG00000016167) #18 MBD5 (ENSCSAG00000016175) #19 ORC4 (ENSCSAG00000016183) #20 ACVR2A (ENSCSAG00000016192) #21 ZEB2 (ENSCSAG00000016197) #22 GTDC1 (ENSCSAG00000016202) #23 ARHGAP15 (ENSCSAG00000016210) #24 KYNU (ENSCSAG00000016218) #25 LRP1B (ENSCSAG00000016246) #26 NXPH2 (ENSCSAG00000016269) #27 SPOPL (ENSCSAG00000016280) #28 HNMT (ENSCSAG00000016288) #29 ENSCSAG00000018644 #30 ENSCSAG00000016290 #31 CXCR4 (ENSCSAG00000016296) #32 DARS1 (ENSCSAG00000016303) #33 MCM6 (ENSCSAG00000016311) #34 LCT (ENSCSAG00000016321) #35 UBXN4 (ENSCSAG00000016344) #36 R3HDM1 (ENSCSAG00000016356) #37 Cercopithecinae_a ANCESTRAL SPECIES 16 ENSGT00530000063686.a.a #9 ENSGT00910000147393 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00940000153201.j.k.a.a.b.a.b #12 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00910000146654 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 ENSGT00910000147897 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00910000147617 ENSGT00390000015060.m.d ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862.i.a #29 ENSGT00940000159262 #31 ENSGT00940000163355 ENSGT00940000153434.a.b.b ENSGT01050000244848.C.a #32 Macaca ANCESTRAL SPECIES 15 ENSGT00530000063686.a.a #9 ENSGT00910000147393 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00940000153201.j.k.a.a.b.a.b #12 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00390000010822.p #17 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00910000147617 ENSGT00390000015060.m.d ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862.i.a #29 ENSGT00940000154507.g.b ENSGT00390000008527.k.a.d ENSGT00390000002862.i.b ##29 ENSGT00390000008859.b.d.k.b.f #30 ENSGT00940000159262 #31 Macaca_a ANCESTRAL SPECIES 17 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00390000010822.p #17 ENSGT00940000158526 #18 ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.b.a.a.a.a.b.a.a.b.a.a.a ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00390000015224.c.a.a.a.k.e.a ENSGT00950000183208.A.c.a.e #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00390000015060.m.d ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862.i.a #29 ENSGT00390000002862.i.b ##29 ENSGT00390000008859.b.d.k.b.f #30 ENSGT00940000159262 #31 ENSGT01100000263493.a.b.a.a.a.a.a.a.a.a.a.a.a.a.b ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Rhesus MODERN SPECIES 3 LYPD6 (ENSMMUG00000038492) #14 ENSMMUG00000056996 LYPD6B (ENSMMUG00000009475) #15 KIF5C (ENSMMUG00000009268) #16 ENSMMUG00000031468 #17 EPC2 (ENSMMUG00000023176) #18 ENSMMUG00000054591 ENSMMUG00000049941 MBD5 (ENSMMUG00000014921) #19 ORC4 (ENSMMUG00000000043) #20 ACVR2A (ENSMMUG00000000042) #21 ENSMMUG00000006925 ENSMMUG00000055627 ENSMMUG00000052142 ENSMMUG00000065347 ZEB2 (ENSMMUG00000016845) #22 GTDC1 (ENSMMUG00000011922) #23 ARHGAP15 (ENSMMUG00000006528) #24 KYNU (ENSMMUG00000021330) #25 LRP1B (ENSMMUG00000009885) #26 ENSMMUG00000013925 NXPH2 (ENSMMUG00000005176) #27 SPOPL (ENSMMUG00000002560) #28 HNMT (ENSMMUG00000006918) ##29 ENSMMUG00000042063 #30 THSD7B (ENSMMUG00000017081) #31 ENSMMUG00000061465 CXCR4 (ENSMMUG00000011918) #32 ENSMMUG00000063101 DARS1 (ENSMMUG00000040854) #33 MCM6 (ENSMMUG00000017486) #34 Crab-eating macaque MODERN SPECIES 3 RND3 (ENSMFAG00000045221) #11 ENSMFAG00000037633 ##12 ENSMFAG00000060272 MMADHC (ENSMFAG00000001801) #13 LYPD6 (ENSMFAG00000002977) #14 LYPD6B (ENSMFAG00000046204) #15 KIF5C (ENSMFAG00000038774) #16 ENSMFAG00000052887 EPC2 (ENSMFAG00000002751) #18 ENSMFAG00000058250 MBD5 (ENSMFAG00000035493) #19 ORC4 (ENSMFAG00000031595) #20 ACVR2A (ENSMFAG00000003464) #21 ENSMFAG00000019961 ENSMFAG00000052786 ZEB2 (ENSMFAG00000030381) #22 GTDC1 (ENSMFAG00000032520) #23 ARHGAP15 (ENSMFAG00000016740) #24 KYNU (ENSMFAG00000041160) #25 ENSMFAG00000049588 ENSMFAG00000064685 LRP1B (ENSMFAG00000036929) #26 NXPH2 (ENSMFAG00000039309) #27 SPOPL (ENSMFAG00000033909) #28 ENSMFAG00000040453 #29 ENSMFAG00000035962 ##29 ENSMFAG00000049120 #30 THSD7B (ENSMFAG00000031342) #31 ENSMFAG00000058697 ENSMFAG00000042200 CXCR4 (ENSMFAG00000037063) #32 Pig-tailed macaque MODERN SPECIES 192 ENSMNEG00000015507 ENSMNEG00000007919 ZEB2 (ENSMNEG00000039161) #22 GTDC1 (ENSMNEG00000045082) #23 ENSMNEG00000031658 ARHGAP15 (ENSMNEG00000032082) #24 KYNU (ENSMNEG00000028278) #25 ENSMNEG00000000025 LRP1B (ENSMNEG00000044502) #26 ENSMNEG00000019241 ENSMNEG00000007981 NXPH2 (ENSMNEG00000042710) #27 SPOPL (ENSMNEG00000039162) #28 ENSMNEG00000037114 ENSMNEG00000043854 ENSMNEG00000043214 ##29 ENSMNEG00000045373 #30 THSD7B (ENSMNEG00000030691) #31 Cercopithecinae_b ANCESTRAL SPECIES 10 ENSGT00910000147393 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00940000153201.j.k.a.a.b.a.b #12 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00910000146654 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01040000240515.h ENSGT01020000230615 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 ENSGT00910000147897 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00910000147617 ENSGT00390000015060.m.d ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00940000159262 #31 ENSGT00940000163355 ENSGT00940000153434.a.b.b ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 Olive baboon MODERN SPECIES 1 LYPD6 (ENSPANG00000019895) #14 LYPD6B (ENSPANG00000022096) #15 KIF5C (ENSPANG00000018689) #16 ENSPANG00000042526 EPC2 (ENSPANG00000009534) #18 MBD5 (ENSPANG00000015848) #19 ORC4 (ENSPANG00000009846) #20 ACVR2A (ENSPANG00000012445) #21 ENSPANG00000035057 CLIC1 (ENSPANG00000019928) ENSPANG00000015679 ENSPANG00000003757 ENSPANG00000043648 ENSPANG00000045723 ENSPANG00000040201 ZEB2 (ENSPANG00000008399) #22 GTDC1 (ENSPANG00000021875) #23 ARHGAP15 (ENSPANG00000009773) #24 KYNU (ENSPANG00000019763) #25 ENSPANG00000050765 ENSPANG00000039415 ENSPANG00000046031 LRP1B (ENSPANG00000007101) #26 ENSPANG00000018859 ENSPANG00000038498 NXPH2 (ENSPANG00000015734) #27 SPOPL (ENSPANG00000019764) #28 THSD7B (ENSPANG00000018339) #31 ENSPANG00000046987 CXCR4 (ENSPANG00000005008) #32 DARS1 (ENSPANG00000008858) #33 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00530000063686.a.a #9 ENSGT00910000147393 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00940000153201.j.k.a.a.b.a.b #12 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01040000240515.h ENSGT01020000230615 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 ENSGT00910000147897 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00910000147617 ENSGT00390000015060.m.d ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00940000154507.g.b ENSGT00390000008527.k.a.d ENSGT00390000002862.i.a #29 Sooty mangabey MODERN SPECIES 480 ENSCATG00000038471 RBM43 (ENSCATG00000029617) #10 RND3 (ENSCATG00000042453) #11 ENSCATG00000036472 #12 MMADHC (ENSCATG00000043511) #13 LYPD6 (ENSCATG00000030657) #14 LYPD6B (ENSCATG00000033638) #15 KIF5C (ENSCATG00000045100) #16 EPC2 (ENSCATG00000045291) #18 MBD5 (ENSCATG00000040834) #19 ORC4 (ENSCATG00000045066) #20 ACVR2A (ENSCATG00000033685) #21 ENSCATG00000039190 ENSCATG00000012613 ENSCATG00000012956 ZEB2 (ENSCATG00000038567) #22 ENSCATG00000017157 GTDC1 (ENSCATG00000040626) #23 ENSCATG00000042700 ARHGAP15 (ENSCATG00000036437) #24 KYNU (ENSCATG00000038620) #25 ENSCATG00000013264 LRP1B (ENSCATG00000014557) #26 ENSCATG00000007439 ENSCATG00000004097 NXPH2 (ENSCATG00000006119) #27 SPOPL (ENSCATG00000045289) #28 ENSCATG00000042403 Drill MODERN SPECIES 987 ENSMLEG00000013965 ZEB2 (ENSMLEG00000003652) #22 ENSMLEG00000040312 ENSMLEG00000001942 GTDC1 (ENSMLEG00000035705) #23 ENSMLEG00000041074 ARHGAP15 (ENSMLEG00000039979) #24 KYNU (ENSMLEG00000043940) #25 Rhinopithecus ANCESTRAL SPECIES 19 ENSGT01020000230615 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 ENSGT00910000147897 ENSGT00390000006631 #23 ENSGT00390000004690.a.a.v.jb ENSGT00390000004450 ENSGT00440000039055 ENSGT00940000159874 ENSGT00550000074820.h.bb.a ENSGT00940000159730 ENSGT00390000004574 ENSGT00550000076427 ENSGT00940000158572 ENSGT00940000153451.a.a.a ENSGT00940000157961.C ENSGT00860000135964 Black snub-nosed monkey MODERN SPECIES 1223 ENSRBIG00000030909 ZEB2 (ENSRBIG00000032824) #22 GTDC1 (ENSRBIG00000009657) #23 ENSRBIG00000034891 Golden snub-nosed monkey MODERN SPECIES 2889 ENSRROG00000038359 ENSRROG00000030532 ZEB2 (ENSRROG00000036815) #22 ENSRROG00000040342 GTDC1 (ENSRROG00000032211) #23 ENSRROG00000032262 ARHGAP15 (ENSRROG00000035864) #24 KYNU (ENSRROG00000014406) #25 Hominoidea ANCESTRAL SPECIES 15 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00910000147393 ENSGT00530000063686.a.b #10 ENSGT00940000154530.r.b.b ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00910000146654 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 ENSGT00910000147897 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT00940000163355 ENSGT00940000153434.a.b.a.b.l ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Hominidae ANCESTRAL SPECIES 17 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00910000147393 ENSGT00530000063686.a.b #10 ENSGT00940000154530.r.b.b ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00910000146654 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a.e #22 ENSGT00910000147897 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT00940000163355 ENSGT00940000153434.a.b.a.b.l ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 14 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00910000147393 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a.e #22 ENSGT00910000147897 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT00940000163355 ENSGT00940000153434.a.b.a.b.l ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Gorilla MODERN SPECIES 15 ENSGGOG00000002066 NEB (ENSGGOG00000016489) RIF1 (ENSGGOG00000040178) #7 TNFAIP6 (ENSGGOG00000022498) #8 NMI (ENSGGOG00000013518) #9 RBM43 (ENSGGOG00000041294) #10 RND3 (ENSGGOG00000036127) #11 MMADHC (ENSGGOG00000027348) #13 LYPD6 (ENSGGOG00000007400) #14 LYPD6B (ENSGGOG00000000801) #15 KIF5C (ENSGGOG00000016596) #16 EPC2 (ENSGGOG00000011299) #18 MBD5 (ENSGGOG00000003833) #19 ORC4 (ENSGGOG00000022258) #20 ACVR2A (ENSGGOG00000015713) #21 ZEB2 (ENSGGOG00000003186) #22 ENSGGOG00000039783 GTDC1 (ENSGGOG00000015776) #23 ARHGAP15 (ENSGGOG00000034982) #24 KYNU (ENSGGOG00000007406) #25 LRP1B (ENSGGOG00000040868) #26 ENSGGOG00000026916 NXPH2 (ENSGGOG00000008363) #27 SPOPL (ENSGGOG00000016285) #28 HNMT (ENSGGOG00000011567) #29 THSD7B (ENSGGOG00000009703) #31 ENSGGOG00000040151 ENSGGOG00000037201 CXCR4 (ENSGGOG00000016862) #32 DARS1 (ENSGGOG00000007482) #33 MCM6 (ENSGGOG00000010911) #34 Homo/Pan group ANCESTRAL SPECIES 13 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00910000147393 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a.e #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT00940000163355 ENSGT00940000153434.a.b.a.b.l ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 Pan ANCESTRAL SPECIES 12 ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00910000147393 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00960000190927 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a.e #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00390000007384.c.b ENSGT00940000157521.b #26 ENSGT00910000147617 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT01090000260061.c.b.lg.b.b.b ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT00940000153434.a.b.a.b.l ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Bonobo MODERN SPECIES 15 RIF1 (ENSPPAG00000023754) #7 TNFAIP6 (ENSPPAG00000029874) #8 NMI (ENSPPAG00000034174) #9 ENSPPAG00000028605 RBM43 (ENSPPAG00000035042) #10 RND3 (ENSPPAG00000042575) #11 MMADHC (ENSPPAG00000029746) #13 LYPD6 (ENSPPAG00000043249) #14 LYPD6B (ENSPPAG00000039900) #15 KIF5C (ENSPPAG00000031052) #16 ENSPPAG00000001157 EPC2 (ENSPPAG00000040114) #18 MBD5 (ENSPPAG00000037170) #19 ORC4 (ENSPPAG00000043794) #20 ACVR2A (ENSPPAG00000043981) #21 ZEB2 (ENSPPAG00000025839) #22 GTDC1 (ENSPPAG00000033824) #23 ARHGAP15 (ENSPPAG00000031056) #24 KYNU (ENSPPAG00000008434) #25 ENSPPAG00000039032 LRP1B (ENSPPAG00000003706) #26 ENSPPAG00000041987 ENSPPAG00000040658 NXPH2 (ENSPPAG00000039555) #27 SPOPL (ENSPPAG00000001924) #28 ENSPPAG00000038546 HNMT (ENSPPAG00000030141) #29 THSD7B (ENSPPAG00000036421) #31 ENSPPAG00000009775 ENSPPAG00000032080 CXCR4 (ENSPPAG00000041523) #32 Chimpanzee MODERN SPECIES 15 NEB (ENSPTRG00000012536) RIF1 (ENSPTRG00000012534) #7 TNFAIP6 (ENSPTRG00000012533) #8 NMI (ENSPTRG00000012531) #9 RBM43 (ENSPTRG00000046668) #10 RND3 (ENSPTRG00000012527) #11 MMADHC (ENSPTRG00000012525) #13 LYPD6 (ENSPTRG00000012524) #14 LYPD6B (ENSPTRG00000012523) #15 KIF5C (ENSPTRG00000012521) #16 ENSPTRG00000051205 EPC2 (ENSPTRG00000012518) #18 MBD5 (ENSPTRG00000029184) #19 ORC4 (ENSPTRG00000012515) #20 ACVR2A (ENSPTRG00000012514) #21 ZEB2 (ENSPTRG00000012513) #22 GTDC1 (ENSPTRG00000012511) #23 ARHGAP15 (ENSPTRG00000012510) #24 KYNU (ENSPTRG00000012509) #25 ENSPTRG00000048004 LRP1B (ENSPTRG00000012508) #26 ENSPTRG00000042896 ENSPTRG00000052120 NXPH2 (ENSPTRG00000012505) #27 SPOPL (ENSPTRG00000012504) #28 ENSPTRG00000042850 HNMT (ENSPTRG00000012503) #29 THSD7B (ENSPTRG00000012502) #31 ENSPTRG00000042775 CXCR4 (ENSPTRG00000012501) #32 DARS1 (ENSPTRG00000012500) #33 Human MODERN SPECIES 11 ARL5A (ENSG00000162980) NEB (ENSG00000183091) RIF1 (ENSG00000080345) #7 TNFAIP6 (ENSG00000123610) #8 NMI (ENSG00000123609) #9 RBM43 (ENSG00000184898) #10 RND3 (ENSG00000115963) #11 MMADHC (ENSG00000168288) #13 LYPD6 (ENSG00000187123) #14 LYPD6B (ENSG00000150556) #15 KIF5C (ENSG00000168280) #16 EPC2 (ENSG00000135999) #18 MBD5 (ENSG00000204406) #19 ORC4 (ENSG00000115947) #20 ACVR2A (ENSG00000121989) #21 ZEB2 (ENSG00000169554) #22 GTDC1 (ENSG00000121964) #23 ARHGAP15 (ENSG00000075884) #24 KYNU (ENSG00000115919) #25 LRP1B (ENSG00000168702) #26 NXPH2 (ENSG00000144227) #27 SPOPL (ENSG00000144228) #28 HNMT (ENSG00000150540) #29 THSD7B (ENSG00000144229) #31 CXCR4 (ENSG00000121966) #32 DARS1 (ENSG00000115866) #33 MCM6 (ENSG00000076003) #34 LCT (ENSG00000115850) #35 UBXN4 (ENSG00000144224) #36 R3HDM1 (ENSG00000048991) #37 ZRANB3 (ENSG00000121988) Orangutan MODERN SPECIES 15 TNFAIP6 (ENSPPYG00000012845) #8 ENSPPYG00000012844 #9 RBM43 (ENSPPYG00000037248) #10 ENSPPYG00000036365 RND3 (ENSPPYG00000012842) #11 MMADHC (ENSPPYG00000012840) #13 LYPD6 (ENSPPYG00000012839) #14 ENSPPYG00000029593 #15 KIF5C (ENSPPYG00000012838) #16 ENSPPYG00000032644 EPC2 (ENSPPYG00000012837) #18 ENSPPYG00000036116 MBD5 (ENSPPYG00000012836) #19 ORC4 (ENSPPYG00000012835) #20 ACVR2A (ENSPPYG00000012834) #21 ZEB2 (ENSPPYG00000012831) #22 ENSPPYG00000031095 #23 GTDC1 (ENSPPYG00000034543) #23 ARHGAP15 (ENSPPYG00000012828) #24 KYNU (ENSPPYG00000012827) #25 LRP1B (ENSPPYG00000012826) #26 NXPH2 (ENSPPYG00000031440) #27 SPOPL (ENSPPYG00000039370) #28 ENSPPYG00000018028 HNMT (ENSPPYG00000012824) #29 THSD7B (ENSPPYG00000036773) #31 CXCR4 (ENSPPYG00000012823) #32 DARS1 (ENSPPYG00000012822) #33 MCM6 (ENSPPYG00000012821) #34 LCT (ENSPPYG00000012820) #35 UBXN4 (ENSPPYG00000012819) #36 Gibbon MODERN SPECIES 12 SNX8 (ENSNLEG00000008623) EIF3B (ENSNLEG00000008647) CHST12 (ENSNLEG00000018713) ENSNLEG00000027995 LFNG (ENSNLEG00000008670) LYPD6 (ENSNLEG00000008684) #14 LYPD6B (ENSNLEG00000031677) #15 KIF5C (ENSNLEG00000008723) #16 ENSNLEG00000035194 EPC2 (ENSNLEG00000009134) #18 MBD5 (ENSNLEG00000009103) #19 ORC4 (ENSNLEG00000009077) #20 ACVR2A (ENSNLEG00000009051) #21 ENSNLEG00000034154 ENSNLEG00000029139 ZEB2 (ENSNLEG00000009020) #22 ENSNLEG00000033258 ENSNLEG00000031423 GTDC1 (ENSNLEG00000009003) #23 ARHGAP15 (ENSNLEG00000008984) #24 KYNU (ENSNLEG00000008970) #25 LRP1B (ENSNLEG00000008924) #26 ENSNLEG00000030102 ENSNLEG00000028194 NXPH2 (ENSNLEG00000008920) #27 ENSNLEG00000030338 ENSNLEG00000033628 HNMT (ENSNLEG00000008899) #29 THSD7B (ENSNLEG00000008876) #31 ENSNLEG00000028168 ENSNLEG00000031448 Catarrhini ANCESTRAL SPECIES 14 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 ENSGT00940000161833 ENSGT01020000230401.a.a.a.i.a.b Hominoidea ANCESTRAL SPECIES 10 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT01100000263819 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 ENSGT00940000161833 ENSGT01020000230401.a.a.a.i.a.b Hominidae ANCESTRAL SPECIES 81 ENSGT00950000183208.A.c.a.f ##22 ENSGT00900000143214 Homo/Pan/Gorilla group ANCESTRAL SPECIES 11 ENSGT00940000157235 ENSGT00940000158985.b ENSGT00940000159756 ENSGT00940000158402 ENSGT01030000234946.d.a.b.b ENSGT00940000154965.B ENSGT00390000001577 ENSGT01100000263819 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00900000143214 ENSGT00390000017515.o.b ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 Homo/Pan group ANCESTRAL SPECIES 10 ENSGT00940000157235 ENSGT00940000158985.b ENSGT00940000159756 ENSGT00940000158402 ENSGT01030000234946.d.a.b.b ENSGT00940000154965.B ENSGT00390000001577 ENSGT01100000263819 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00900000143214 ENSGT00390000017515.o.b ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 Pan ANCESTRAL SPECIES 7 ENSGT00940000157235 ENSGT00940000158985.b ENSGT00940000159756 ENSGT00940000158402 ENSGT01030000234946.d.a.b.b ENSGT00940000154965.B ENSGT00390000001577 ENSGT01100000263819 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00900000143214 ENSGT00390000017515.o.b ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 Chimpanzee MODERN SPECIES 17 PACRGL (ENSPTRG00000015945) SLIT2 (ENSPTRG00000024331) ENSPTRG00000050513 LCORL (ENSPTRG00000052306) NCAPG (ENSPTRG00000015942) ENSPTRG00000045108 DCAF16 (ENSPTRG00000051571) FAM184B (ENSPTRG00000015940) MED28 (ENSPTRG00000045116) LAP3 (ENSPTRG00000015938) CLRN2 (ENSPTRG00000050671) QDPR (ENSPTRG00000015936) ENSPTRG00000009418 ENSPTRG00000039221 LDB2 (ENSPTRG00000015935) ENSPTRG00000049469 ##22 ENSPTRG00000045915 ENSPTRG00000049952 TAPT1 (ENSPTRG00000015933) PROM1 (ENSPTRG00000015932) FGFBP2 (ENSPTRG00000031250) FGFBP1 (ENSPTRG00000015931) CD38 (ENSPTRG00000015930) BST1 (ENSPTRG00000015929) FAM200B (ENSPTRG00000044690) FBXL5 (ENSPTRG00000015927) CC2D2A (ENSPTRG00000015926) C1QTNF7 (ENSPTRG00000015925) CPEB2 (ENSPTRG00000015924) BOD1L1 (ENSPTRG00000015922) NKX3-2 (ENSPTRG00000048496) Bonobo MODERN SPECIES 17 ENSPPAG00000011801 ADGRA3 (ENSPPAG00000035849) KCNIP4 (ENSPPAG00000033844) PACRGL (ENSPPAG00000027879) SLIT2 (ENSPPAG00000043820) LCORL (ENSPPAG00000039308) NCAPG (ENSPPAG00000028077) ENSPPAG00000023045 DCAF16 (ENSPPAG00000021334) FAM184B (ENSPPAG00000038055) MED28 (ENSPPAG00000034569) LAP3 (ENSPPAG00000029619) CLRN2 (ENSPPAG00000027659) QDPR (ENSPPAG00000036323) LDB2 (ENSPPAG00000033538) ENSPPAG00000033372 ##22 ENSPPAG00000033323 TAPT1 (ENSPPAG00000027508) PROM1 (ENSPPAG00000032761) FGFBP2 (ENSPPAG00000012344) FGFBP1 (ENSPPAG00000023092) ENSPPAG00000035131 CD38 (ENSPPAG00000036378) BST1 (ENSPPAG00000034960) FAM200B (ENSPPAG00000012482) FBXL5 (ENSPPAG00000007317) CC2D2A (ENSPPAG00000039745) C1QTNF7 (ENSPPAG00000000881) ENSPPAG00000009844 BOD1L1 (ENSPPAG00000014926) NKX3-2 (ENSPPAG00000039595) Gorilla MODERN SPECIES 17 ENSGGOG00000026378 ADGRA3 (ENSGGOG00000026666) ENSGGOG00000038375 PACRGL (ENSGGOG00000012603) SLIT2 (ENSGGOG00000006151) ENSGGOG00000037439 LCORL (ENSGGOG00000014894) NCAPG (ENSGGOG00000015019) ENSGGOG00000038365 FAM184B (ENSGGOG00000007263) MED28 (ENSGGOG00000001114) LAP3 (ENSGGOG00000001110) CLRN2 (ENSGGOG00000004114) QDPR (ENSGGOG00000004110) LDB2 (ENSGGOG00000000354) ENSGGOG00000039877 ##22 ENSGGOG00000039503 TAPT1 (ENSGGOG00000011812) PROM1 (ENSGGOG00000016139) FGFBP2 (ENSGGOG00000028579) FGFBP1 (ENSGGOG00000016135) CD38 (ENSGGOG00000006165) BST1 (ENSGGOG00000008845) FAM200B (ENSGGOG00000027844) FBXL5 (ENSGGOG00000010962) CC2D2A (ENSGGOG00000002758) C1QTNF7 (ENSGGOG00000005890) CPEB2 (ENSGGOG00000004449) BOD1L1 (ENSGGOG00000027616) NKX3-2 (ENSGGOG00000008589) RAB28 (ENSGGOG00000024190) Gibbon MODERN SPECIES 12 ADGRA3 (ENSNLEG00000016741) KCNIP4 (ENSNLEG00000016720) PACRGL (ENSNLEG00000016706) SLIT2 (ENSNLEG00000016689) ENSNLEG00000031015 LCORL (ENSNLEG00000016684) NCAPG (ENSNLEG00000016632) ENSNLEG00000036017 FAM184B (ENSNLEG00000031656) ENSNLEG00000016620 LAP3 (ENSNLEG00000016606) CLRN2 (ENSNLEG00000016604) QDPR (ENSNLEG00000016583) LDB2 (ENSNLEG00000016557) ENSNLEG00000031825 ENSNLEG00000029526 ##22 TAPT1 (ENSNLEG00000016541) PROM1 (ENSNLEG00000016422) ENSNLEG00000027474 CD38 (ENSNLEG00000032175) BST1 (ENSNLEG00000016391) FAM200B (ENSNLEG00000018958) FBXL5 (ENSNLEG00000016352) CC2D2A (ENSNLEG00000016292) C1QTNF7 (ENSNLEG00000016288) ENSNLEG00000016275 ENSNLEG00000030451 BOD1L1 (ENSNLEG00000016260) NKX3-2 (ENSNLEG00000016256) RAB28 (ENSNLEG00000016243) ENSNLEG00000030301 Cercopithecidae ANCESTRAL SPECIES 10 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000003682.ib.a.b.f.b.a.b ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00940000153675.a.a.b.e.a.g.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 ENSGT00940000161833 Rhinopithecus ANCESTRAL SPECIES 397 ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00940000153675.a.a.b.e.a.g.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 Black snub-nosed monkey MODERN SPECIES 515 ENSRBIG00000040694 LDB2 (ENSRBIG00000036476) ENSRBIG00000031383 ##22 ENSRBIG00000028214 TAPT1 (ENSRBIG00000001303) PROM1 (ENSRBIG00000035435) FGFBP1 (ENSRBIG00000029998) CD38 (ENSRBIG00000033782) ENSRBIG00000031766 BST1 (ENSRBIG00000038163) FAM200B (ENSRBIG00000030919) FBXL5 (ENSRBIG00000033592) CC2D2A (ENSRBIG00000028040) C1QTNF7 (ENSRBIG00000017615) CPEB2 (ENSRBIG00000028478) Golden snub-nosed monkey MODERN SPECIES 1401 ENSRROG00000030574 LDB2 (ENSRROG00000031191) ENSRROG00000031165 ##22 Cercopithecinae ANCESTRAL SPECIES 14 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000003682.ib.a.b.f.b.a.b ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00940000153675.a.a.b.e.a.g.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 ENSGT00940000161833 Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000003682.ib.a.b.f.b.a.b ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00940000153675.a.a.b.e.a.g.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 ENSGT00940000161833 Cercopithecinae_b ANCESTRAL SPECIES 6 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000003682.ib.a.b.f.b.a.b ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00940000153675.a.a.b.e.a.g.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 ENSGT00940000161833 Cercopithecinae_d ANCESTRAL SPECIES 91 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00390000017291.a ENSGT00940000153675.a.a.b.e.a.g.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 ENSGT00940000161833 ENSGT01020000230401.a.a.a.i.a.b Sooty mangabey MODERN SPECIES 551 GBA3 (ENSCATG00000042364) ADGRA3 (ENSCATG00000042545) KCNIP4 (ENSCATG00000031858) PACRGL (ENSCATG00000043616) SLIT2 (ENSCATG00000044093) LCORL (ENSCATG00000032265) NCAPG (ENSCATG00000032636) DCAF16 (ENSCATG00000014975) ENSCATG00000016096 FAM184B (ENSCATG00000040065) MED28 (ENSCATG00000030546) LAP3 (ENSCATG00000040965) CLRN2 (ENSCATG00000032386) QDPR (ENSCATG00000029669) LDB2 (ENSCATG00000019886) ENSCATG00000040373 ##22 TAPT1 (ENSCATG00000042001) PROM1 (ENSCATG00000035341) CD38 (ENSCATG00000045367) ENSCATG00000030711 BST1 (ENSCATG00000003303) FAM200B (ENSCATG00000020983) FBXL5 (ENSCATG00000041236) CC2D2A (ENSCATG00000037758) C1QTNF7 (ENSCATG00000014989) CPEB2 (ENSCATG00000040126) ENSCATG00000019681 BOD1L1 (ENSCATG00000040508) NKX3-2 (ENSCATG00000042215) RAB28 (ENSCATG00000038542) ENSCATG00000013123 Platyrrhini ANCESTRAL SPECIES 9 ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000154530.r.b.b ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00390000002748.j ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000008527.k.a.d ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Cebidae ANCESTRAL SPECIES 11 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00390000002748.j ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000008527.k.a.d ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Marmoset MODERN SPECIES 18 ENSCJAG00000083510 RND3 (ENSCJAG00000045984) #11 ENSCJAG00000071388 ENSCJAG00000075779 ENSCJAG00000070079 ENSCJAG00000003086 #13 LYPD6 (ENSCJAG00000055489) #14 LYPD6B (ENSCJAG00000003077) #15 KIF5C (ENSCJAG00000003053) #16 ENSCJAG00000076357 EPC2 (ENSCJAG00000012637) #18 MBD5 (ENSCJAG00000012594) #19 ORC4 (ENSCJAG00000012561) #20 ACVR2A (ENSCJAG00000012496) #21 ENSCJAG00000065177 ZEB2 (ENSCJAG00000012457) #22 ENSCJAG00000070871 GTDC1 (ENSCJAG00000012421) #23 ENSCJAG00000079909 ARHGAP15 (ENSCJAG00000012381) #24 KYNU (ENSCJAG00000012322) #25 ENSCJAG00000087216 ENSCJAG00000012316 ENSCJAG00000052641 LRP1B (ENSCJAG00000012158) #26 ENSCJAG00000071088 NXPH2 (ENSCJAG00000012152) #27 SPOPL (ENSCJAG00000041394) #28 ENSCJAG00000086160 HNMT (ENSCJAG00000012109) #29 ENSCJAG00000063660 Cebidae_a ANCESTRAL SPECIES 27 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00390000002748.j ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000008527.k.a.d ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Bolivian squirrel monkey MODERN SPECIES 46 NEB (ENSSBOG00000031622) RIF1 (ENSSBOG00000029530) #7 TNFAIP6 (ENSSBOG00000034644) #8 NMI (ENSSBOG00000035067) #9 RBM43 (ENSSBOG00000022371) #10 RND3 (ENSSBOG00000025108) #11 ENSSBOG00000035889 #13 LYPD6 (ENSSBOG00000019011) #14 LYPD6B (ENSSBOG00000017701) #15 KIF5C (ENSSBOG00000013675) #16 EPC2 (ENSSBOG00000035940) #18 MBD5 (ENSSBOG00000024663) #19 ORC4 (ENSSBOG00000028104) #20 ACVR2A (ENSSBOG00000025103) #21 ENSSBOG00000018747 ZEB2 (ENSSBOG00000026124) #22 ENSSBOG00000025406 GTDC1 (ENSSBOG00000030737) #23 ENSSBOG00000023369 ARHGAP15 (ENSSBOG00000027845) #24 KYNU (ENSSBOG00000029002) #25 ENSSBOG00000021516 LRP1B (ENSSBOG00000032751) #26 NXPH2 (ENSSBOG00000035598) #27 SPOPL (ENSSBOG00000021667) #28 ENSSBOG00000028590 HNMT (ENSSBOG00000022759) #29 ENSSBOG00000013560 THSD7B (ENSSBOG00000020495) #31 CXCR4 (ENSSBOG00000004406) #32 DARS1 (ENSSBOG00000009265) #33 Capuchin MODERN SPECIES 27 NEB (ENSCCAG00000026566) RIF1 (ENSCCAG00000024760) #7 TNFAIP6 (ENSCCAG00000022288) #8 NMI (ENSCCAG00000022500) #9 RBM43 (ENSCCAG00000020911) #10 RND3 (ENSCCAG00000030386) #11 MMADHC (ENSCCAG00000036477) #13 LYPD6 (ENSCCAG00000028399) #14 LYPD6B (ENSCCAG00000030062) #15 KIF5C (ENSCCAG00000031241) #16 EPC2 (ENSCCAG00000037425) #18 MBD5 (ENSCCAG00000030324) #19 ORC4 (ENSCCAG00000008932) #20 ACVR2A (ENSCCAG00000034862) #21 ENSCCAG00000019840 ZEB2 (ENSCCAG00000036823) #22 GTDC1 (ENSCCAG00000001331) #23 ARHGAP15 (ENSCCAG00000034364) #24 KYNU (ENSCCAG00000028624) #25 LRP1B (ENSCCAG00000026411) #26 ENSCCAG00000028899 ENSCCAG00000030027 NXPH2 (ENSCCAG00000030575) #27 ENSCCAG00000029320 ENSCCAG00000030134 SPOPL (ENSCCAG00000025193) #28 ENSCCAG00000028597 HNMT (ENSCCAG00000020581) #29 Mas night monkey MODERN SPECIES 1327 ENSANAG00000031452 ZEB2 (ENSANAG00000029252) #22 ENSANAG00000020250 GTDC1 (ENSANAG00000028072) #23 ENSANAG00000030213 ARHGAP15 (ENSANAG00000032949) #24 KYNU (ENSANAG00000035940) #25 Tarsier MODERN SPECIES 4528 ZEB2 (ENSTSYG00000009434) #22 ENSTSYG00000025627 Strepsirrhini ANCESTRAL SPECIES 10 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 Lemuriformes ANCESTRAL SPECIES 5 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 Mouse lemur MODERN SPECIES 30 NEB (ENSMICG00000007063) RIF1 (ENSMICG00000046127) #7 TNFAIP6 (ENSMICG00000045439) #8 NMI (ENSMICG00000046560) #9 RBM43 (ENSMICG00000002078) #10 ENSMICG00000033304 RND3 (ENSMICG00000035694) #11 MMADHC (ENSMICG00000005952) #13 LYPD6 (ENSMICG00000041550) #14 LYPD6B (ENSMICG00000016688) #15 KIF5C (ENSMICG00000016670) #16 EPC2 (ENSMICG00000016659) #18 MBD5 (ENSMICG00000017046) #19 ORC4 (ENSMICG00000004578) #20 ACVR2A (ENSMICG00000004565) #21 ZEB2 (ENSMICG00000017462) #22 GTDC1 (ENSMICG00000007473) #23 ARHGAP15 (ENSMICG00000043939) #24 SCN3A (ENSMICG00000001132) ENSMICG00000002843 CSRNP3 (ENSMICG00000015267) GALNT3 (ENSMICG00000015295) TTC21B (ENSMICG00000015487) ENSMICG00000031358 SCN1A (ENSMICG00000004920) SCN9A (ENSMICG00000004943) SCN7A (ENSMICG00000014439) XIRP2 (ENSMICG00000033404) B3GALT1 (ENSMICG00000042176) STK39 (ENSMICG00000012416) ENSMICG00000034404 Lemuriformes_a ANCESTRAL SPECIES 265 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 Greater bamboo lemur MODERN SPECIES 497 ENSPSMG00000002747 ZEB2 (ENSPSMG00000002937) #22 GTDC1 (ENSPSMG00000003397) #23 ARHGAP15 (ENSPSMG00000003530) #24 KYNU (ENSPSMG00000003553) #25 Coquerels sifaka MODERN SPECIES 235 ENSPCOG00000017463 ZEB2 (ENSPCOG00000022388) #22 ENSPCOG00000018425 GTDC1 (ENSPCOG00000020298) #23 ARHGAP15 (ENSPCOG00000020719) #24 KYNU (ENSPCOG00000020945) #25 Bushbaby MODERN SPECIES 179 TNFAIP6 (ENSOGAG00000011099) #8 NMI (ENSOGAG00000002762) #9 RBM43 (ENSOGAG00000002761) #10 RND3 (ENSOGAG00000006980) #11 MMADHC (ENSOGAG00000034385) #13 LYPD6 (ENSOGAG00000009025) #14 LYPD6B (ENSOGAG00000009022) #15 KIF5C (ENSOGAG00000009021) #16 ENSOGAG00000027538 EPC2 (ENSOGAG00000009018) #18 MBD5 (ENSOGAG00000005182) #19 ENSOGAG00000007606 ORC4 (ENSOGAG00000004022) #20 ACVR2A (ENSOGAG00000004021) #21 ENSOGAG00000025795 ZEB2 (ENSOGAG00000010020) #22 GTDC1 (ENSOGAG00000001984) #23 ARHGAP15 (ENSOGAG00000001981) #24 KYNU (ENSOGAG00000001979) #25 ENSOGAG00000033357 ENSOGAG00000031179 ENSOGAG00000027412 #26 Euarchontoglires_A ANCESTRAL SPECIES 13 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Tree shrew MODERN SPECIES 3650 ZEB2 (ENSTBEG00000013983) #22 Glires ANCESTRAL SPECIES 14 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Lagomorpha ANCESTRAL SPECIES 12 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 ENSGT00940000158559 Rabbit MODERN SPECIES 18 ENSOCUG00000025786 ENSOCUG00000036417 RND3 (ENSOCUG00000001751) #11 MMADHC (ENSOCUG00000008124) #13 LYPD6 (ENSOCUG00000008118) #14 ENSOCUG00000030777 LYPD6B (ENSOCUG00000008346) #15 KIF5C (ENSOCUG00000009699) #16 EPC2 (ENSOCUG00000012712) #18 ENSOCUG00000034178 ENSOCUG00000033587 MBD5 (ENSOCUG00000010432) #19 ORC4 (ENSOCUG00000016412) #20 ACVR2A (ENSOCUG00000016398) #21 ENSOCUG00000030462 ZEB2 (ENSOCUG00000027880) #22 ENSOCUG00000038697 GTDC1 (ENSOCUG00000002102) #23 ARHGAP15 (ENSOCUG00000000471) #24 KYNU (ENSOCUG00000006194) #25 ENSOCUG00000024326 ENSOCUG00000032003 LRP1B (ENSOCUG00000017165) #26 ENSOCUG00000038204 ENSOCUG00000032587 ENSOCUG00000032512 ENSOCUG00000021532 ENSOCUG00000025059 NXPH2 (ENSOCUG00000026297) #27 SPOPL (ENSOCUG00000006944) #28 ENSOCUG00000034988 Pika MODERN SPECIES 3244 ZEB2 (ENSOPRG00000006205) #22 Rodentia ANCESTRAL SPECIES 14 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Rodentia_A ANCESTRAL SPECIES 13 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 Hystricomorpha ANCESTRAL SPECIES 20 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b.d #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 Hystricomorpha_a ANCESTRAL SPECIES 17 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b.d #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 Hystricomorpha_b ANCESTRAL SPECIES 67 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b.d #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 ENSGT00940000158559 Long-tailed chinchilla MODERN SPECIES 147 NEB (ENSCLAG00000002157) RIF1 (ENSCLAG00000001517) #7 TNFAIP6 (ENSCLAG00000002857) #8 NMI (ENSCLAG00000002759) #9 RBM43 (ENSCLAG00000002635) #10 ENSCLAG00000002555 #11 ENSCLAG00000002537 MMADHC (ENSCLAG00000002129) #13 LYPD6 (ENSCLAG00000001952) #14 LYPD6B (ENSCLAG00000002017) #15 KIF5C (ENSCLAG00000001868) #16 EPC2 (ENSCLAG00000001768) #18 MBD5 (ENSCLAG00000001690) #19 ORC4 (ENSCLAG00000002811) #20 ACVR2A (ENSCLAG00000002708) #21 ZEB2 (ENSCLAG00000002230) #22 GTDC1 (ENSCLAG00000007819) #23 ARHGAP15 (ENSCLAG00000006756) #24 KYNU (ENSCLAG00000005935) #25 LRP1B (ENSCLAG00000002036) #26 NXPH2 (ENSCLAG00000017455) #27 SPOPL (ENSCLAG00000001710) #28 HNMT (ENSCLAG00000001523) #29 THSD7B (ENSCLAG00000001388) #31 CXCR4 (ENSCLAG00000002279) #32 DARS1 (ENSCLAG00000006355) #33 MCM6 (ENSCLAG00000005315) #34 LCT (ENSCLAG00000005005) #35 UBXN4 (ENSCLAG00000004332) #36 R3HDM1 (ENSCLAG00000007962) #37 ZRANB3 (ENSCLAG00000006849) Degu MODERN SPECIES 123 RND3 (ENSODEG00000003549) #11 ENSODEG00000003457 ENSODEG00000003416 #13 LYPD6 (ENSODEG00000003357) #14 LYPD6B (ENSODEG00000003306) #15 ENSODEG00000018967 KIF5C (ENSODEG00000003161) #16 EPC2 (ENSODEG00000003123) #18 ENSODEG00000003098 ENSODEG00000003076 #19 ENSODEG00000018860 ENSODEG00000002909 ENSODEG00000002882 ORC4 (ENSODEG00000007273) #20 ACVR2A (ENSODEG00000007139) #21 ZEB2 (ENSODEG00000006916) #22 ENSODEG00000006826 ENSODEG00000006741 #23 ARHGAP15 (ENSODEG00000006679) #24 ENSODEG00000006607 #24 KYNU (ENSODEG00000003172) #25 Guinea pig MODERN SPECIES 3 RIF1 (ENSCPOG00000037898) #7 ENSCPOG00000038795 TNFAIP6 (ENSCPOG00000007974) #8 NMI (ENSCPOG00000013053) #9 RBM43 (ENSCPOG00000037758) #10 ENSCPOG00000033292 RND3 (ENSCPOG00000035751) #11 MMADHC (ENSCPOG00000007690) #13 LYPD6 (ENSCPOG00000007686) #14 LYPD6B (ENSCPOG00000034526) #15 KIF5C (ENSCPOG00000026278) #16 EPC2 (ENSCPOG00000008502) #18 MBD5 (ENSCPOG00000006236) #19 ORC4 (ENSCPOG00000008580) #20 ACVR2A (ENSCPOG00000008575) #21 ZEB2 (ENSCPOG00000004182) #22 ENSCPOG00000035797 GTDC1 (ENSCPOG00000007030) #23 ARHGAP15 (ENSCPOG00000007467) #24 KYNU (ENSCPOG00000011220) #25 ENSCPOG00000021859 ENSCPOG00000038865 LRP1B (ENSCPOG00000014122) #26 NXPH2 (ENSCPOG00000003323) #27 SPOPL (ENSCPOG00000006344) #28 HNMT (ENSCPOG00000002449) #29 THSD7B (ENSCPOG00000001976) #31 CXCR4 (ENSCPOG00000014249) #32 DARS1 (ENSCPOG00000004614) #33 MCM6 (ENSCPOG00000004609) #34 ENSCPOG00000037215 #35 Naked mole-rat female MODERN SPECIES 22 ENSHGLG00000020241 ENSHGLG00000003241 KIF5C (ENSHGLG00000002894) #16 EPC2 (ENSHGLG00000001526) #18 ENSHGLG00000042407 ENSHGLG00000045749 MBD5 (ENSHGLG00000000588) #19 ENSHGLG00000012065 ENSHGLG00000042968 ORC4 (ENSHGLG00000035874) #20 ACVR2A (ENSHGLG00000046847) #21 ENSHGLG00000036243 ENSHGLG00000043585 ENSHGLG00000033112 ENSHGLG00000007625 ZEB2 (ENSHGLG00000018878) #22 GTDC1 (ENSHGLG00000012745) #23 ARHGAP15 (ENSHGLG00000018323) #24 ENSHGLG00000005612 KYNU (ENSHGLG00000014874) #25 ENSHGLG00000009393 #26 ENSHGLG00000042261 ENSHGLG00000045830 ENSHGLG00000047841 ENSHGLG00000015109 #27 ENSHGLG00000015539 #28 ENSHGLG00000035617 ENSHGLG00000039209 #29 ENSHGLG00000009497 ENSHGLG00000046944 ENSHGLG00000038812 Sciuridae ANCESTRAL SPECIES 10 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00490000043329.a.a.a.k.a ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526.c.b #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 ENSGT00940000158559 Eurasian red squirrel MODERN SPECIES 12 RBM43 (ENSSVLG00005003593) #10 ENSSVLG00005003570 RND3 (ENSSVLG00005003560) #11 ENSSVLG00005003548 MMADHC (ENSSVLG00005003507) #13 LYPD6 (ENSSVLG00005003472) #14 LYPD6B (ENSSVLG00005003456) #15 KIF5C (ENSSVLG00005003411) #16 EPC2 (ENSSVLG00005003372) #18 MBD5 (ENSSVLG00005003333) #19 ORC4 (ENSSVLG00005003298) #20 ACVR2A (ENSSVLG00005003270) #21 ENSSVLG00005003233 ENSSVLG00005003222 ENSSVLG00005003208 ENSSVLG00005003174 #22 GTDC1 (ENSSVLG00005003107) #23 ARHGAP15 (ENSSVLG00005003035) #24 KYNU (ENSSVLG00005002948) #25 ENSSVLG00005002904 LRP1B (ENSSVLG00005002708) #26 NXPH2 (ENSSVLG00005002646) #27 SPOPL (ENSSVLG00005002616) #28 HNMT (ENSSVLG00005002599) #29 THSD7B (ENSSVLG00005002439) #31 CXCR4 (ENSSVLG00005002352) #32 DARS1 (ENSSVLG00005002326) #33 MCM6 (ENSSVLG00005002280) #34 LCT (ENSSVLG00005002233) #35 UBXN4 (ENSSVLG00005002201) #36 ENSSVLG00005002116 #37 Marmotini ANCESTRAL SPECIES 2 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00490000043329.a.a.a.k.a ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526.c.b #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT00390000016988.a.a.a.b.a.b ENSGT01050000244848.C.a #32 ENSGT00950000182891.a.a.b.b ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 Marmotini_b ANCESTRAL SPECIES 10 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00490000043329.a.a.a.k.a ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526.c.b #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT00390000016988.a.a.a.b.a.b ENSGT01050000244848.C.a #32 ENSGT00950000182891.a.a.b.b ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 Arctic ground squirrel MODERN SPECIES 3 RBM43 (ENSUPAG00010004382) #10 ENSUPAG00010004388 ENSUPAG00010004396 RND3 (ENSUPAG00010004413) #11 MMADHC (ENSUPAG00010004432) #13 LYPD6 (ENSUPAG00010004464) #14 LYPD6B (ENSUPAG00010004479) #15 KIF5C (ENSUPAG00010004496) #16 EPC2 (ENSUPAG00010004529) #18 ENSUPAG00010004532 ENSUPAG00010004533 MBD5 (ENSUPAG00010004537) #19 ORC4 (ENSUPAG00010004557) #20 ACVR2A (ENSUPAG00010004582) #21 ENSUPAG00010004608 ZEB2 (ENSUPAG00010004644) #22 GTDC1 (ENSUPAG00010004826) #23 ARHGAP15 (ENSUPAG00010004846) #24 KYNU (ENSUPAG00010004892) #25 LRP1B (ENSUPAG00010004938) #26 ENSUPAG00010005063 ENSUPAG00010005074 NXPH2 (ENSUPAG00010005088) #27 SPOPL (ENSUPAG00010005093) #28 HNMT (ENSUPAG00010005103) #29 THSD7B (ENSUPAG00010005115) #31 ENSUPAG00010005155 CXCR4 (ENSUPAG00010005161) #32 ENSUPAG00010005164 DARS1 (ENSUPAG00010005170) #33 LCT (ENSUPAG00010005203) #35 Squirrel MODERN SPECIES 69 RIF1 (ENSSTOG00000020712) #7 TNFAIP6 (ENSSTOG00000016314) #8 NMI (ENSSTOG00000028659) #9 RBM43 (ENSSTOG00000016311) #10 ENSSTOG00000021862 RND3 (ENSSTOG00000009798) #11 MMADHC (ENSSTOG00000021576) #13 LYPD6 (ENSSTOG00000029572) #14 LYPD6B (ENSSTOG00000021300) #15 KIF5C (ENSSTOG00000008408) #16 EPC2 (ENSSTOG00000010468) #18 MBD5 (ENSSTOG00000024028) #19 ORC4 (ENSSTOG00000026092) #20 ACVR2A (ENSSTOG00000025105) #21 ENSSTOG00000032731 ZEB2 (ENSSTOG00000003811) #22 GTDC1 (ENSSTOG00000016373) #23 ARHGAP15 (ENSSTOG00000009312) #24 KYNU (ENSSTOG00000009286) #25 LRP1B (ENSSTOG00000002686) #26 ENSSTOG00000031059 NXPH2 (ENSSTOG00000001587) #27 SPOPL (ENSSTOG00000022722) #28 HNMT (ENSSTOG00000010780) #29 THSD7B (ENSSTOG00000002491) #31 CXCR4 (ENSSTOG00000006334) #32 ENSSTOG00000034891 DARS1 (ENSSTOG00000006292) #33 MCM6 (ENSSTOG00000013639) #34 LCT (ENSSTOG00000013618) #35 UBXN4 (ENSSTOG00000007625) #36 Alpin marmot MODERN SPECIES 5 ENSMMMG00000021776 ENSMMMG00000021771 ENSMMMG00000021752 RND3 (ENSMMMG00000021746) #11 MMADHC (ENSMMMG00000021733) #13 LYPD6 (ENSMMMG00000021723) #14 LYPD6B (ENSMMMG00000021702) #15 KIF5C (ENSMMMG00000021654) #16 ENSMMMG00000021646 EPC2 (ENSMMMG00000021637) #18 ENSMMMG00000021627 ENSMMMG00000021626 #19 ENSMMMG00000021615 #20 ENSMMMG00000021598 ACVR2A (ENSMMMG00000021587) #21 ZEB2 (ENSMMMG00000021492) #22 GTDC1 (ENSMMMG00000021476) #23 ENSMMMG00000021461 ARHGAP15 (ENSMMMG00000021442) #24 KYNU (ENSMMMG00000021410) #25 LRP1B (ENSMMMG00000021313) #26 NXPH2 (ENSMMMG00000021251) #27 SPOPL (ENSMMMG00000021248) #28 HNMT (ENSMMMG00000021232) #29 THSD7B (ENSMMMG00000021210) #31 ENSMMMG00000021196 CXCR4 (ENSMMMG00000021192) #32 ENSMMMG00000021188 DARS1 (ENSMMMG00000021177) #33 MCM6 (ENSMMMG00000021164) #34 LCT (ENSMMMG00000021153) #35 Rodentia_B ANCESTRAL SPECIES 12 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 Kangaroo rat MODERN SPECIES 445 Zeb2 (ENSDORG00000023390) #22 Gtdc1 (ENSDORG00000005149) #23 Arhgap15 (ENSDORG00000006610) #24 Kynu (ENSDORG00000015633) #25 ENSDORG00000025577 ENSDORG00000027686 Lrp1b (ENSDORG00000015070) #26 ENSDORG00000029267 Nxph2 (ENSDORG00000027837) #27 Spopl (ENSDORG00000028165) #28 Hnmt (ENSDORG00000029599) #29 Myomorpha ANCESTRAL SPECIES 10 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 Muroidea ANCESTRAL SPECIES 34 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT01100000263477.B.d.a.b ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT01100000263477.B.d.a.b ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159561 ENSGT00950000182943.kb.b.b.a.a.b ENSGT00950000182943.kb.b.b.a.a.a ENSGT00950000182943.kb.b.b.a.b ENSGT00950000182943.kb.b.a.b.a Cricetidae ANCESTRAL SPECIES 12 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT01100000263477.B.d.a.b ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159561 ENSGT00950000182943.kb.b.b.a.a.b ENSGT00950000182943.kb.b.b.a.a.a ENSGT00950000182943.kb.b.b.a.b ENSGT00950000182943.kb.b.a.b.a Cricetinae ANCESTRAL SPECIES 1 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159561 ENSGT00950000182943.kb.b.b.a.a.b ENSGT00950000182943.kb.b.b.a.a.a ENSGT00550000075010.i.a ENSGT00950000182943.kb.b.b.a.b Chinese hamster chok1gshd MODERN SPECIES 188 Tnfaip6 (ENSCGRG00001024845) #8 Nmi (ENSCGRG00001000480) #9 Rbm43 (ENSCGRG00001011129) #10 ENSCGRG00001014515 Tas2r134 (ENSCGRG00001008402) Rnd3 (ENSCGRG00001018416) #11 Mmadhc (ENSCGRG00001008423) #13 Lypd6 (ENSCGRG00001009801) #14 Lypd6b (ENSCGRG00001008503) #15 Kif5c (ENSCGRG00001021373) #16 Epc2 (ENSCGRG00001024568) #18 Mbd5 (ENSCGRG00001001266) #19 Orc4 (ENSCGRG00001001352) #20 Acvr2a (ENSCGRG00001024754) #21 ENSCGRG00001000890 Zeb2 (ENSCGRG00001003812) #22 ENSCGRG00001006690 Gtdc1 (ENSCGRG00001014426) #23 ENSCGRG00001008381 Arhgap15 (ENSCGRG00001011371) #24 Kynu (ENSCGRG00001005556) #25 ENSCGRG00001012428 ENSCGRG00001009004 #26 ENSCGRG00001024491 Nxph2 (ENSCGRG00001024840) #27 Spopl (ENSCGRG00001010346) #28 ENSCGRG00001008614 ENSCGRG00001024843 #29 ENSCGRG00001001542 ENSCGRG00001009248 Tbpl2 (ENSCGRG00001015310) Golden Hamster MODERN SPECIES 633 Neb (ENSMAUG00000004953) Rif1 (ENSMAUG00000013158) #7 Nmi (ENSMAUG00000011421) #9 Rbm43 (ENSMAUG00000012908) #10 Rnd3 (ENSMAUG00000011617) #11 Mmadhc (ENSMAUG00000011028) #13 Lypd6 (ENSMAUG00000009256) #14 Lypd6b (ENSMAUG00000013712) #15 Kif5c (ENSMAUG00000009793) #16 ENSMAUG00000001219 #18 ENSMAUG00000000214 #19 Orc4 (ENSMAUG00000013801) #20 Acvr2a (ENSMAUG00000018729) #21 ENSMAUG00000017030 ENSMAUG00000016231 Zeb2 (ENSMAUG00000015393) #22 Gtdc1 (ENSMAUG00000001170) #23 Arhgap15 (ENSMAUG00000012165) #24 Kynu (ENSMAUG00000013067) #25 ENSMAUG00000009235 Lrp1b (ENSMAUG00000019371) #26 ENSMAUG00000014547 Cricetidae_B ANCESTRAL SPECIES 7 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT01100000263477.B.d.a.b ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159561 ENSGT00950000182943.kb.b.b.a.a.b ENSGT00950000182943.kb.b.b.a.a.a ENSGT00950000182943.kb.b.b.a.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.b.a Northern American deer mouse MODERN SPECIES 17 Tas2r134 (ENSPEMG00000026859) Rnd3 (ENSPEMG00000030018) #11 ENSPEMG00000028309 Mmadhc (ENSPEMG00000015462) #13 Lypd6 (ENSPEMG00000030454) #14 Lypd6b (ENSPEMG00000030753) #15 Kif5c (ENSPEMG00000013456) #16 Epc2 (ENSPEMG00000008844) #18 Mbd5 (ENSPEMG00000012335) #19 Orc4 (ENSPEMG00000013503) #20 Acvr2a (ENSPEMG00000025982) #21 ENSPEMG00000030197 ENSPEMG00000008317 ENSPEMG00000029306 ENSPEMG00000009353 Zeb2 (ENSPEMG00000004029) #22 Gtdc1 (ENSPEMG00000006747) #23 Arhgap15 (ENSPEMG00000008557) #24 Kynu (ENSPEMG00000011128) #25 ENSPEMG00000028178 ENSPEMG00000029273 ENSPEMG00000019536 Lrp1b (ENSPEMG00000019442) #26 ENSPEMG00000030960 ENSPEMG00000027862 Nxph2 (ENSPEMG00000014216) #27 Spopl (ENSPEMG00000024413) #28 ENSPEMG00000029398 Hnmt (ENSPEMG00000016185) #29 ENSPEMG00000030551 Tbpl2 (ENSPEMG00000018472) Prairie vole MODERN SPECIES 12 Neb (ENSMOCG00000022729) Rif1 (ENSMOCG00000009381) #7 Tnfaip6 (ENSMOCG00000003915) #8 ENSMOCG00000011562 Rbm43 (ENSMOCG00000007686) #10 Rnd3 (ENSMOCG00000019178) #11 Mmadhc (ENSMOCG00000012955) #13 Lypd6 (ENSMOCG00000006453) #14 Lypd6b (ENSMOCG00000020650) #15 Kif5c (ENSMOCG00000001353) #16 Epc2 (ENSMOCG00000003346) #18 Mbd5 (ENSMOCG00000019347) #19 Orc4 (ENSMOCG00000008587) #20 Acvr2a (ENSMOCG00000001323) #21 ENSMOCG00000007379 Zeb2 (ENSMOCG00000016943) #22 Gtdc1 (ENSMOCG00000022059) #23 Arhgap15 (ENSMOCG00000022212) #24 Kynu (ENSMOCG00000018120) #25 ENSMOCG00000021528 ENSMOCG00000020186 ENSMOCG00000001529 Lrp1b (ENSMOCG00000007280) #26 ENSMOCG00000008295 ENSMOCG00000007029 Nxph2 (ENSMOCG00000003297) #27 Spopl (ENSMOCG00000018403) #28 Hnmt (ENSMOCG00000004456) #29 Tbpl2 (ENSMOCG00000012483) Il36g (ENSMOCG00000018096) Il36a (ENSMOCG00000007131) Murinae ANCESTRAL SPECIES 1 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT01100000263477.B.d.a.b ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00550000074961 ENSGT00390000009566 ENSGT00940000153772.B ENSGT00940000158501 ENSGT00390000016384.f.f.e.a ENSGT00940000162358 ENSGT00940000157194 ENSGT00940000157936 ENSGT00940000153391.c.b.a ENSGT00940000157419 ENSGT00940000159990 Mus ANCESTRAL SPECIES 1 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT01100000263477.B.d.a.b ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00550000074961 ENSGT00390000009566 ENSGT00940000153772.B ENSGT00940000158501 ENSGT00390000016384.f.f.e.a ENSGT00940000162358 ENSGT00940000157194 ENSGT00940000157936 ENSGT00940000153391.c.b.a ENSGT00940000157419 ENSGT00940000159990 Mus_A ANCESTRAL SPECIES ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT01100000263477.B.d.a.b ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00550000074961 ENSGT00390000009566 ENSGT00940000153772.B ENSGT00940000158501 ENSGT00390000016384.f.f.e.a ENSGT00940000162358 ENSGT00940000157194 ENSGT00940000157936 ENSGT00940000153391.c.b.a ENSGT00940000157419 ENSGT00940000159990 Mus_B ANCESTRAL SPECIES 1 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT01100000263477.B.d.a.b ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00550000074961 ENSGT00390000009566 ENSGT00940000153772.B ENSGT00940000158501 ENSGT00390000016384.f.f.e.a ENSGT00940000162358 ENSGT00940000157194 ENSGT00940000157936 ENSGT00940000153391.c.b.a ENSGT00940000157419 ENSGT00940000159990 Mus_C ANCESTRAL SPECIES ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT01100000263477.B.d.a.b ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00390000012037.x ENSGT00550000074961 ENSGT00390000009566 ENSGT00940000153772.B ENSGT00940000158501 ENSGT00390000016384.f.f.e.a ENSGT00940000162358 ENSGT00940000157194 ENSGT00940000157936 ENSGT00940000153391.c.b.a ENSGT00940000157419 Steppe mouse MODERN SPECIES 3197 Zeb2 (ENSMSIG00000020240) #22 ENSMSIG00000020426 ENSMSIG00000020429 Gtdc1 (ENSMSIG00000020444) #23 ENSMSIG00000020501 ENSMSIG00000020513 #24 spretus MODERN SPECIES 11 Rif1 (MGP_SPRETEiJ_G0024476) #7 Tnfaip6 (MGP_SPRETEiJ_G0024475) #8 Nmi (MGP_SPRETEiJ_G0024474) #9 Rbm43 (MGP_SPRETEiJ_G0024473) #10 Tas2r134 (MGP_SPRETEiJ_G0024472) Rnd3 (MGP_SPRETEiJ_G0024471) #11 Mmadhc (MGP_SPRETEiJ_G0024470) #13 Lypd6 (MGP_SPRETEiJ_G0024469) #14 Lypd6b (MGP_SPRETEiJ_G0024468) #15 Kif5c (MGP_SPRETEiJ_G0024467) #16 Epc2 (MGP_SPRETEiJ_G0024466) #18 MGP_SPRETEiJ_G0024465 Mbd5 (MGP_SPRETEiJ_G0024464) #19 Orc4 (MGP_SPRETEiJ_G0024463) #20 Acvr2a (MGP_SPRETEiJ_G0024462) #21 Zeb2 (MGP_SPRETEiJ_G0024461) #22 Gtdc1 (MGP_SPRETEiJ_G0024460) #23 Arhgap15 (MGP_SPRETEiJ_G0024459) #24 Kynu (MGP_SPRETEiJ_G0024458) #25 Lrp1b (MGP_SPRETEiJ_G0024457) #26 MGP_SPRETEiJ_G0024456 Ppp6c (MGP_SPRETEiJ_G0024455) Scai (MGP_SPRETEiJ_G0024454) Golga1 (MGP_SPRETEiJ_G0024453) Arpc5l (MGP_SPRETEiJ_G0024452) MGP_SPRETEiJ_G0024451 Wdr38 (MGP_SPRETEiJ_G0024450) Olfml2a (MGP_SPRETEiJ_G0024449) Nr6a1 (MGP_SPRETEiJ_G0024448) Nr5a1 (MGP_SPRETEiJ_G0024447) Psmb7 (MGP_SPRETEiJ_G0024446) Mouse MODERN SPECIES 11 Neb (ENSMUSG00000026950) Rif1 (ENSMUSG00000036202) #7 Tnfaip6 (ENSMUSG00000053475) #8 Nmi (ENSMUSG00000026946) #9 Rbm43 (ENSMUSG00000036249) #10 Tas2r134 (ENSMUSG00000056115) Rnd3 (ENSMUSG00000017144) #11 Mmadhc (ENSMUSG00000026766) #13 Lypd6 (ENSMUSG00000050447) #14 Lypd6b (ENSMUSG00000026765) #15 Kif5c (ENSMUSG00000026764) #16 Epc2 (ENSMUSG00000069495) #18 Mbd5 (ENSMUSG00000036792) #19 Orc4 (ENSMUSG00000026761) #20 Acvr2a (ENSMUSG00000052155) #21 Zeb2 (ENSMUSG00000026872) #22 Gtdc1 (ENSMUSG00000036890) #23 Arhgap15 (ENSMUSG00000049744) #24 Kynu (ENSMUSG00000026866) #25 Lrp1b (ENSMUSG00000049252) #26 Ppp6c (ENSMUSG00000026753) Scai (ENSMUSG00000035236) Golga1 (ENSMUSG00000026754) Arpc5l (ENSMUSG00000026755) Rpl35 (ENSMUSG00000062997) Wdr38 (ENSMUSG00000035295) Olfml2a (ENSMUSG00000046618) Nr6a1 (ENSMUSG00000063972) Nr5a1 (ENSMUSG00000026751) Psmb7 (ENSMUSG00000026750) Nek6 (ENSMUSG00000026749) Ryukyu mouse MODERN SPECIES 11 MGP_CAROLIEiJ_G0023556 Rif1 (MGP_CAROLIEiJ_G0023555) #7 Tnfaip6 (MGP_CAROLIEiJ_G0023554) #8 Nmi (MGP_CAROLIEiJ_G0023553) #9 Rbm43 (MGP_CAROLIEiJ_G0023552) #10 Tas2r134 (MGP_CAROLIEiJ_G0023551) Rnd3 (MGP_CAROLIEiJ_G0023550) #11 Mmadhc (MGP_CAROLIEiJ_G0023549) #13 Lypd6 (MGP_CAROLIEiJ_G0023548) #14 Lypd6b (MGP_CAROLIEiJ_G0023547) #15 Kif5c (MGP_CAROLIEiJ_G0023546) #16 Epc2 (MGP_CAROLIEiJ_G0023545) #18 Mbd5 (MGP_CAROLIEiJ_G0023544) #19 Orc4 (MGP_CAROLIEiJ_G0023543) #20 Acvr2a (MGP_CAROLIEiJ_G0023542) #21 Zeb2 (MGP_CAROLIEiJ_G0023541) #22 Gtdc1 (MGP_CAROLIEiJ_G0023540) #23 Arhgap15 (MGP_CAROLIEiJ_G0023539) #24 MGP_CAROLIEiJ_G0023538 #25 Lrp1b (MGP_CAROLIEiJ_G0023537) #26 MGP_CAROLIEiJ_G0023536 Ppp6c (MGP_CAROLIEiJ_G0023535) Scai (MGP_CAROLIEiJ_G0023534) Golga1 (MGP_CAROLIEiJ_G0023533) Arpc5l (MGP_CAROLIEiJ_G0023532) MGP_CAROLIEiJ_G0023531 Wdr38 (MGP_CAROLIEiJ_G0023530) Olfml2a (MGP_CAROLIEiJ_G0023529) Nr6a1 (MGP_CAROLIEiJ_G0023528) Nr5a1 (MGP_CAROLIEiJ_G0023527) Psmb7 (MGP_CAROLIEiJ_G0023526) Shrew mouse MODERN SPECIES 16 MGP_PahariEiJ_G0025007 Rif1 (MGP_PahariEiJ_G0025006) #7 Tnfaip6 (MGP_PahariEiJ_G0025005) #8 Nmi (MGP_PahariEiJ_G0025004) #9 Rbm43 (MGP_PahariEiJ_G0025003) #10 Tas2r134 (MGP_PahariEiJ_G0025002) Rnd3 (MGP_PahariEiJ_G0025001) #11 Mmadhc (MGP_PahariEiJ_G0025000) #13 Lypd6 (MGP_PahariEiJ_G0024999) #14 Lypd6b (MGP_PahariEiJ_G0024998) #15 Kif5c (MGP_PahariEiJ_G0024997) #16 Epc2 (MGP_PahariEiJ_G0024996) #18 Mbd5 (MGP_PahariEiJ_G0024995) #19 Orc4 (MGP_PahariEiJ_G0024994) #20 Acvr2a (MGP_PahariEiJ_G0024993) #21 Zeb2 (MGP_PahariEiJ_G0024992) #22 Gtdc1 (MGP_PahariEiJ_G0024991) #23 Arhgap15 (MGP_PahariEiJ_G0024990) #24 Kynu (MGP_PahariEiJ_G0024989) #25 Lrp1b (MGP_PahariEiJ_G0024988) #26 Ppp6c (MGP_PahariEiJ_G0024987) Scai (MGP_PahariEiJ_G0024986) Golga1 (MGP_PahariEiJ_G0024985) Arpc5l (MGP_PahariEiJ_G0024984) MGP_PahariEiJ_G0024983 Olfml2a (MGP_PahariEiJ_G0024982) Nr6a1 (MGP_PahariEiJ_G0024981) Nr5a1 (MGP_PahariEiJ_G0024980) Psmb7 (MGP_PahariEiJ_G0024979) Nek6 (MGP_PahariEiJ_G0024978) Lhx2 (MGP_PahariEiJ_G0024977) Rat MODERN SPECIES 13 Rnd3 (ENSRNOG00000004624) #11 LOC499796 (ENSRNOG00000028112) Mmadhc (ENSRNOG00000004740) #13 Hnrnpa1-ps20 (ENSRNOG00000005951) LOC120101547 (ENSRNOG00000048601) Lypd6 (ENSRNOG00000068044) #14 Ns5atp4-ps3 (ENSRNOG00000027533) Lypd6b (ENSRNOG00000004614) #15 Kif5c (ENSRNOG00000004680) #16 Epc2 (ENSRNOG00000029447) #18 Mbd5 (ENSRNOG00000027596) #19 Orc4 (ENSRNOG00000005021) #20 Acvr2a (ENSRNOG00000005334) #21 ENSRNOG00000062624 ENSRNOG00000067798 Zeb2 (ENSRNOG00000004677) #22 Gtdc1 (ENSRNOG00000031038) #23 Arhgap15 (ENSRNOG00000031168) #24 Kynu (ENSRNOG00000029993) #25 Lrp1b (ENSRNOG00000030243) #26 LOC100362366 (ENSRNOG00000028690) AABR07051831.1 (ENSRNOG00000015854) Ppp6c (ENSRNOG00000015145) Scai (ENSRNOG00000025278) Golga1 (ENSRNOG00000014493) Arpc5l (ENSRNOG00000014317) Rpl35 (ENSRNOG00000014272) Wdr38 (ENSRNOG00000014102) Olfml2a (ENSRNOG00000014034) Nr6a1 (ENSRNOG00000013232) Nr5a1 (ENSRNOG00000012682) Upper Galilee mountains blind mole rat MODERN SPECIES 1881 Tnfaip6 (ENSNGAG00000007671) #8 ENSNGAG00000013509 Rbm43 (ENSNGAG00000016028) #10 Tas2r134 (ENSNGAG00000015380) Rnd3 (ENSNGAG00000001477) #11 ENSNGAG00000000384 ENSNGAG00000014803 Mmadhc (ENSNGAG00000008470) #13 Lypd6 (ENSNGAG00000010779) #14 Lypd6b (ENSNGAG00000012606) #15 Kif5c (ENSNGAG00000020904) #16 Epc2 (ENSNGAG00000015488) #18 Mbd5 (ENSNGAG00000018784) #19 Orc4 (ENSNGAG00000012001) #20 Acvr2a (ENSNGAG00000020006) #21 Zeb2 (ENSNGAG00000016618) #22 ENSNGAG00000000981 Gtdc1 (ENSNGAG00000011627) #23 Arhgap15 (ENSNGAG00000003717) #24 Kynu (ENSNGAG00000015519) #25 ENSNGAG00000005556 Lrp1b (ENSNGAG00000000689) #26 ENSNGAG00000009773 Lesser Egyptian jerboa MODERN SPECIES 46 Rbm43 (ENSJJAG00000000368) #10 ENSJJAG00000011149 Rnd3 (ENSJJAG00000015179) #11 ENSJJAG00000011930 ENSJJAG00000012494 #13 Lypd6 (ENSJJAG00000020503) #14 Lypd6b (ENSJJAG00000011004) #15 ENSJJAG00000021666 #16 Epc2 (ENSJJAG00000023818) #18 Mbd5 (ENSJJAG00000023609) #19 Orc4 (ENSJJAG00000011085) #20 Acvr2a (ENSJJAG00000014798) #21 ENSJJAG00000017205 ENSJJAG00000000614 ENSJJAG00000011334 Zeb2 (ENSJJAG00000015138) #22 ENSJJAG00000012093 Gtdc1 (ENSJJAG00000022232) #23 Arhgap15 (ENSJJAG00000002439) #24 Kynu (ENSJJAG00000011644) #25 ENSJJAG00000020358 Lrp1b (ENSJJAG00000022916) #26 Nxph2 (ENSJJAG00000024187) #27 Spopl (ENSJJAG00000008673) #28 ENSJJAG00000019196 ENSJJAG00000017206 Hnmt (ENSJJAG00000021221) #29 Sowahc (ENSJJAG00000016974) Septin10 (ENSJJAG00000013785) Sh3rf3 (ENSJJAG00000016244) Edar (ENSJJAG00000023368) Laurasiatheria ANCESTRAL SPECIES 12 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT01050000244986.b.b ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183208.A.c.a #22 Common shrew MODERN SPECIES 5031 ZEB2 (ENSSARG00000006858) #22 Hedgehog MODERN SPECIES 6466 ZEB2 (ENSEEUG00000005764) #22 Laurasiatheria_a ANCESTRAL SPECIES 16 ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT01090000260806 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Laurasiatheria_b ANCESTRAL SPECIES 16 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT01090000260806 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00910000147617 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Laurasiatheria_c ANCESTRAL SPECIES 18 ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00910000147897 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 Equus ANCESTRAL SPECIES 18 ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01030000234916 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00390000000805.h ENSGT00940000155324 #35 ENSGT00940000160205 #36 Horse MODERN SPECIES 9 NMI (ENSECAG00000006801) #9 RBM43 (ENSECAG00000000566) #10 RND3 (ENSECAG00000021310) #11 MMADHC (ENSECAG00000014503) #13 LYPD6 (ENSECAG00000014321) #14 LYPD6B (ENSECAG00000013932) #15 KIF5C (ENSECAG00000013822) #16 EPC2 (ENSECAG00000010930) #18 ENSECAG00000008805 ENSECAG00000056446 ENSECAG00000055420 MBD5 (ENSECAG00000024839) #19 ORC4 (ENSECAG00000013910) #20 ACVR2A (ENSECAG00000000138) #21 ENSECAG00000039452 ZEB2 (ENSECAG00000019355) #22 GTDC1 (ENSECAG00000014136) #23 ARHGAP15 (ENSECAG00000012312) #24 KYNU (ENSECAG00000018188) #25 ENSECAG00000052918 LRP1B (ENSECAG00000012212) #26 NXPH2 (ENSECAG00000023822) #27 SPOPL (ENSECAG00000013631) #28 ENSECAG00000031440 HNMT (ENSECAG00000011592) #29 THSD7B (ENSECAG00000007595) #31 CXCR4 (ENSECAG00000003837) #32 DARS1 (ENSECAG00000024197) #33 MCM6 (ENSECAG00000008840) #34 ENSECAG00000007662 LCT (ENSECAG00000018594) #35 Donkey MODERN SPECIES 24 NMI (ENSEASG00005023440) #9 RBM43 (ENSEASG00005033269) #10 RND3 (ENSEASG00005038021) #11 MMADHC (ENSEASG00005023444) #13 LYPD6 (ENSEASG00005023445) #14 LYPD6B (ENSEASG00005032417) #15 KIF5C (ENSEASG00005023448) #16 EPC2 (ENSEASG00005023449) #18 MBD5 (ENSEASG00005023450) #19 ORC4 (ENSEASG00005023452) #20 ACVR2A (ENSEASG00005023453) #21 ENSEASG00005033216 ENSEASG00005023460 ENSEASG00005023463 ENSEASG00005024596 ZEB2 (ENSEASG00005030252) #22 GTDC1 (ENSEASG00005023470) #23 ARHGAP15 (ENSEASG00005023473) #24 KYNU (ENSEASG00005023479) #25 LRP1B (ENSEASG00005023483) #26 NXPH2 (ENSEASG00005034518) #27 SPOPL (ENSEASG00005007329) #28 ENSEASG00005026069 HNMT (ENSEASG00005007333) #29 THSD7B (ENSEASG00005007338) #31 CXCR4 (ENSEASG00005007346) #32 DARS1 (ENSEASG00005007349) #33 ENSEASG00005034643 MCM6 (ENSEASG00005007355) #34 ENSEASG00005007359 LCT (ENSEASG00005007363) #35 Chiroptera ANCESTRAL SPECIES 11 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00910000147897 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 Microchiroptera ANCESTRAL SPECIES 15 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00910000147897 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 Greater horseshoe bat MODERN SPECIES 26 NMI (ENSRFEG00010004983) #9 RBM43 (ENSRFEG00010004990) #10 RND3 (ENSRFEG00010005000) #11 ENSRFEG00010005006 MMADHC (ENSRFEG00010005008) #13 LYPD6 (ENSRFEG00010005018) #14 ENSRFEG00010005025 LYPD6B (ENSRFEG00010005029) #15 KIF5C (ENSRFEG00010005056) #16 EPC2 (ENSRFEG00010005117) #18 MBD5 (ENSRFEG00010005157) #19 ORC4 (ENSRFEG00010005186) #20 ACVR2A (ENSRFEG00010005214) #21 ENSRFEG00010005235 ENSRFEG00010005242 ZEB2 (ENSRFEG00010005264) #22 ENSRFEG00010005283 GTDC1 (ENSRFEG00010005310) #23 ARHGAP15 (ENSRFEG00010005362) #24 KYNU (ENSRFEG00010005399) #25 LRP1B (ENSRFEG00010005535) #26 ENSRFEG00010005820 ENSRFEG00010005852 NXPH2 (ENSRFEG00010005863) #27 SPOPL (ENSRFEG00010005880) #28 ENSRFEG00010005902 HNMT (ENSRFEG00010005923) #29 THSD7B (ENSRFEG00010005956) #31 ENSRFEG00010005984 CXCR4 (ENSRFEG00010006005) #32 ENSRFEG00010006026 Microbat MODERN SPECIES 969 LYPD6B (ENSMLUG00000008315) #15 ENSMLUG00000026022 KIF5C (ENSMLUG00000010012) #16 EPC2 (ENSMLUG00000009992) #18 MBD5 (ENSMLUG00000000267) #19 ORC4 (ENSMLUG00000006494) #20 ACVR2A (ENSMLUG00000006484) #21 ENSMLUG00000026714 ZEB2 (ENSMLUG00000002019) #22 GTDC1 (ENSMLUG00000014148) #23 ARHGAP15 (ENSMLUG00000014137) #24 KYNU (ENSMLUG00000003786) #25 ENSMLUG00000029515 ENSMLUG00000029943 ENSMLUG00000024376 LRP1B (ENSMLUG00000015421) #26 ENSMLUG00000022624 ENSMLUG00000030705 ENSMLUG00000022752 ENSMLUG00000028361 ENSMLUG00000030235 NXPH2 (ENSMLUG00000000318) #27 SPOPL (ENSMLUG00000000315) #28 Megabat MODERN SPECIES 2953 ZEB2 (ENSPVAG00000015557) #22 GTDC1 (ENSPVAG00000015556) #23 ARHGAP15 (ENSPVAG00000015555) #24 Carnivora ANCESTRAL SPECIES 17 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT01090000260806 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00910000147617 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Felidae ANCESTRAL SPECIES 15 ENSGT00910000144227.s.b ENSGT00940000157201 #8 ENSGT01090000260806 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 Panthera ANCESTRAL SPECIES 9 ENSGT01050000246169 ENSGT00910000144227.s.b ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00910000147617 ENSGT00390000008903.m.a.a.b ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Panthera_a ANCESTRAL SPECIES 6 ENSGT00910000144227.s.b ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00940000159225.f ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00910000147617 ENSGT00390000008903.m.a.a.b ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 leopard MODERN SPECIES 1 RND3 (ENSPPRG00000007409) #11 ENSPPRG00000007620 ENSPPRG00000008539 #13 LYPD6 (ENSPPRG00000008921) #14 LYPD6B (ENSPPRG00000009609) #15 ENSPPRG00000009816 KIF5C (ENSPPRG00000009950) #16 EPC2 (ENSPPRG00000010357) #18 ENSPPRG00000016642 #18 MBD5 (ENSPPRG00000011397) #19 ORC4 (ENSPPRG00000012919) #20 ACVR2A (ENSPPRG00000013771) #21 ENSPPRG00000016836 ENSPPRG00000016855 ENSPPRG00000016894 ZEB2 (ENSPPRG00000023971) #22 GTDC1 (ENSPPRG00000002408) #23 ARHGAP15 (ENSPPRG00000003769) #24 KYNU (ENSPPRG00000004587) #25 LRP1B (ENSPPRG00000009154) #26 ENSPPRG00000017355 ENSPPRG00000017377 ENSPPRG00000012169 NXPH2 (ENSPPRG00000012365) #27 SPOPL (ENSPPRG00000013080) #28 HNMT (ENSPPRG00000013385) #29 THSD7B (ENSPPRG00000024481) #31 CXCR4 (ENSPPRG00000024427) #32 DARS1 (ENSPPRG00000024294) #33 MCM6 (ENSPPRG00000023335) #34 LCT (ENSPPRG00000022850) #35 lion MODERN SPECIES 8 NMI (ENSPLOG00000022481) #9 RBM43 (ENSPLOG00000022483) #10 RND3 (ENSPLOG00000022487) #11 ENSPLOG00000022492 #13 LYPD6 (ENSPLOG00000022514) #14 LYPD6B (ENSPLOG00000022518) #15 KIF5C (ENSPLOG00000022528) #16 EPC2 (ENSPLOG00000022534) #18 MBD5 (ENSPLOG00000022542) #19 ENSPLOG00000022549 ORC4 (ENSPLOG00000022553) #20 ACVR2A (ENSPLOG00000004697) #21 ENSPLOG00000004702 ENSPLOG00000004716 ENSPLOG00000004721 ZEB2 (ENSPLOG00000004758) #22 GTDC1 (ENSPLOG00000004848) #23 ARHGAP15 (ENSPLOG00000004919) #24 KYNU (ENSPLOG00000004977) #25 ENSPLOG00000005011 LRP1B (ENSPLOG00000005161) #26 ENSPLOG00000005421 NXPH2 (ENSPLOG00000005437) #27 SPOPL (ENSPLOG00000005460) #28 HNMT (ENSPLOG00000005608) #29 THSD7B (ENSPLOG00000005685) #31 ENSPLOG00000005928 ENSPLOG00000005948 ENSPLOG00000005961 CXCR4 (ENSPLOG00000005971) #32 DARS1 (ENSPLOG00000006015) #33 Tiger MODERN SPECIES 243 ENSPTIG00000015310 ENSPTIG00000009533 ZEB2 (ENSPTIG00000015892) #22 GTDC1 (ENSPTIG00000017004) #23 ARHGAP15 (ENSPTIG00000018060) #24 KYNU (ENSPTIG00000018174) #25 LRP1B (ENSPTIG00000018986) #26 ENSPTIG00000009550 ENSPTIG00000009554 NXPH2 (ENSPTIG00000009560) #27 SPOPL (ENSPTIG00000020249) #28 HNMT (ENSPTIG00000020321) #29 THSD7B (ENSPTIG00000020413) #31 CXCR4 (ENSPTIG00000021235) #32 Cat MODERN SPECIES 239 TNFAIP6 (ENSFCAG00000027956) #8 ENSFCAG00000053166 NMI (ENSFCAG00000008426) #9 RBM43 (ENSFCAG00000046232) #10 RND3 (ENSFCAG00000023508) #11 MMADHC (ENSFCAG00000005210) #13 LYPD6 (ENSFCAG00000038369) #14 LYPD6B (ENSFCAG00000013261) #15 KIF5C (ENSFCAG00000025089) #16 EPC2 (ENSFCAG00000023979) #18 MBD5 (ENSFCAG00000028925) #19 ORC4 (ENSFCAG00000029890) #20 ACVR2A (ENSFCAG00000023845) #21 ENSFCAG00000037177 ENSFCAG00000022964 ZEB2 (ENSFCAG00000015532) #22 GTDC1 (ENSFCAG00000012314) #23 ARHGAP15 (ENSFCAG00000011613) #24 KYNU (ENSFCAG00000018501) #25 LRP1B (ENSFCAG00000026584) #26 NXPH2 (ENSFCAG00000039021) #27 SPOPL (ENSFCAG00000040800) #28 HNMT (ENSFCAG00000022918) #29 THSD7B (ENSFCAG00000013556) #31 CXCR4 (ENSFCAG00000015575) #32 DARS1 (ENSFCAG00000014295) #33 MCM6 (ENSFCAG00000013595) #34 LCT (ENSFCAG00000009430) #35 UBXN4 (ENSFCAG00000031029) #36 R3HDM1 (ENSFCAG00000027113) #37 ZRANB3 (ENSFCAG00000024830) Caniformia ANCESTRAL SPECIES 14 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Canidae ANCESTRAL SPECIES 56 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00390000007539.i.b.a.db.b.b ENSGT00940000157541 #11 ENSGT00390000009819.a.b.b ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Canis_lupus ANCESTRAL SPECIES 46 ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00390000007539.i.b.a.db.b.b ENSGT00940000157541 #11 ENSGT00390000009819.a.b.b ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00940000153430.a.b.m.b ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 Dog MODERN SPECIES 10 NMI (ENSCAFG00845008371) #9 ENSCAFG00845008302 RND3 (ENSCAFG00845008171) #11 ENSCAFG00845008096 MMADHC (ENSCAFG00845007815) #13 LYPD6 (ENSCAFG00845007742) #14 LYPD6B (ENSCAFG00845007654) #15 KIF5C (ENSCAFG00845007529) #16 ENSCAFG00845007463 EPC2 (ENSCAFG00845007263) #18 ENSCAFG00845007155 MBD5 (ENSCAFG00845006841) #19 ENSCAFG00845006609 ORC4 (ENSCAFG00845006436) #20 ACVR2A (ENSCAFG00845006266) #21 ZEB2 (ENSCAFG00845006084) #22 GTDC1 (ENSCAFG00845013883) #23 ARHGAP15 (ENSCAFG00845013638) #24 KYNU (ENSCAFG00845013520) #25 ENSCAFG00845013470 ENSCAFG00845013421 ENSCAFG00845013405 LRP1B (ENSCAFG00845011094) #26 NXPH2 (ENSCAFG00845010560) #27 SPOPL (ENSCAFG00845010518) #28 HNMT (ENSCAFG00845010412) #29 THSD7B (ENSCAFG00845010239) #31 ENSCAFG00845010172 #32 DARS1 (ENSCAFG00845010085) #33 MCM6 (ENSCAFG00845009951) #34 LCT (ENSCAFG00845009807) #35 Dingo MODERN SPECIES 101 ENSCAFG00020016388 RND3 (ENSCAFG00020016386) #11 ENSCAFG00020016382 MMADHC (ENSCAFG00020016380) #13 LYPD6 (ENSCAFG00020016377) #14 ENSCAFG00020016375 ENSCAFG00020016369 #15 KIF5C (ENSCAFG00020016358) #16 ENSCAFG00020016356 EPC2 (ENSCAFG00020016353) #18 MBD5 (ENSCAFG00020016351) #19 ENSCAFG00020016350 ENSCAFG00020016348 ORC4 (ENSCAFG00020016340) #20 ACVR2A (ENSCAFG00020016337) #21 ZEB2 (ENSCAFG00020016311) #22 ENSCAFG00020016307 GTDC1 (ENSCAFG00020016302) #23 ARHGAP15 (ENSCAFG00020016269) #24 KYNU (ENSCAFG00020016256) #25 ENSCAFG00020016252 LRP1B (ENSCAFG00020016211) #26 ENSCAFG00020016205 NXPH2 (ENSCAFG00020016197) #27 SPOPL (ENSCAFG00020016186) #28 HNMT (ENSCAFG00020016185) #29 THSD7B (ENSCAFG00020016172) #31 CXCR4 (ENSCAFG00020016170) #32 DARS1 (ENSCAFG00020016165) #33 MCM6 (ENSCAFG00020016161) #34 LCT (ENSCAFG00020016158) #35 Red fox MODERN SPECIES 68 RIF1 (ENSVVUG00000011293) #7 TNFAIP6 (ENSVVUG00000011234) #8 NMI (ENSVVUG00000011210) #9 ENSVVUG00000011201 ENSVVUG00000011159 RND3 (ENSVVUG00000011125) #11 ENSVVUG00000011106 MMADHC (ENSVVUG00000011072) #13 LYPD6 (ENSVVUG00000011061) #14 LYPD6B (ENSVVUG00000011026) #15 KIF5C (ENSVVUG00000010993) #16 EPC2 (ENSVVUG00000010983) #18 MBD5 (ENSVVUG00000010972) #19 ORC4 (ENSVVUG00000010947) #20 ACVR2A (ENSVVUG00000010940) #21 ZEB2 (ENSVVUG00000010869) #22 ENSVVUG00000010866 GTDC1 (ENSVVUG00000010792) #23 ARHGAP15 (ENSVVUG00000010769) #24 KYNU (ENSVVUG00000010732) #25 ENSVVUG00000010703 Caniformia_b ANCESTRAL SPECIES 13 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 Ursidae ANCESTRAL SPECIES 7 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000008783.ab.b ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 Ursus ANCESTRAL SPECIES 162 ENSGT00390000008783.ab.b ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 American black bear MODERN SPECIES 585 ZEB2 (ENSUAMG00000026838) #22 Polar bear MODERN SPECIES 196 ENSUMAG00000006470 ORC4 (ENSUMAG00000006461) #20 ACVR2A (ENSUMAG00000006456) #21 ENSUMAG00000006441 ZEB2 (ENSUMAG00000006420) #22 GTDC1 (ENSUMAG00000006399) #23 ARHGAP15 (ENSUMAG00000006377) #24 KYNU (ENSUMAG00000006355) #25 ENSUMAG00000006341 ENSUMAG00000006335 LRP1B (ENSUMAG00000006142) #26 NXPH2 (ENSUMAG00000006056) #27 SPOPL (ENSUMAG00000006049) #28 HNMT (ENSUMAG00000006034) #29 THSD7B (ENSUMAG00000005964) #31 CXCR4 (ENSUMAG00000005945) #32 DARS1 (ENSUMAG00000005942) #33 MCM6 (ENSUMAG00000005636) #34 LCT (ENSUMAG00000005573) #35 UBXN4 (ENSUMAG00000005565) #36 Giant Panda MODERN SPECIES 11 NEB (ENSAMEG00000008502) RIF1 (ENSAMEG00000008461) #7 TNFAIP6 (ENSAMEG00000013023) #8 NMI (ENSAMEG00000013032) #9 ENSAMEG00000028408 #10 RND3 (ENSAMEG00000025053) #11 ENSAMEG00000006500 #13 LYPD6 (ENSAMEG00000027368) #14 LYPD6B (ENSAMEG00000004593) #15 KIF5C (ENSAMEG00000004598) #16 EPC2 (ENSAMEG00000004689) #18 ENSAMEG00000019708 MBD5 (ENSAMEG00000004750) #19 ORC4 (ENSAMEG00000013398) #20 ACVR2A (ENSAMEG00000013434) #21 ZEB2 (ENSAMEG00000009337) #22 ENSAMEG00000028035 GTDC1 (ENSAMEG00000013100) #23 ARHGAP15 (ENSAMEG00000013114) #24 KYNU (ENSAMEG00000013126) #25 ENSAMEG00000012519 #12 LRP1B (ENSAMEG00000012450) #26 NXPH2 (ENSAMEG00000015387) #27 SPOPL (ENSAMEG00000002595) #28 THSD7B (ENSAMEG00000014390) #31 CXCR4 (ENSAMEG00000019163) #32 DARS1 (ENSAMEG00000005881) #33 MCM6 (ENSAMEG00000005841) #34 LCT (ENSAMEG00000005800) #35 UBXN4 (ENSAMEG00000003672) #36 R3HDM1 (ENSAMEG00000014886) #37 Mustelinae ANCESTRAL SPECIES 21 ENSGT00390000016619.a ENSGT00940000156472 ENSGT00940000155163.b ENSGT00390000005923 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 Ferret MODERN SPECIES 222 ZNF804A (ENSMPUG00000018429) FSIP2 (ENSMPUG00000003504) ZC3H15 (ENSMPUG00000003521) ITGAV (ENSMPUG00000003529) LYPD6 (ENSMPUG00000003548) #14 ENSMPUG00000018430 LYPD6B (ENSMPUG00000003554) #15 KIF5C (ENSMPUG00000003561) #16 EPC2 (ENSMPUG00000003574) #18 MBD5 (ENSMPUG00000003584) #19 ORC4 (ENSMPUG00000003591) #20 ACVR2A (ENSMPUG00000003611) #21 ZEB2 (ENSMPUG00000003620) #22 GTDC1 (ENSMPUG00000003633) #23 ENSMPUG00000003639 ENSMPUG00000003641 ENSMPUG00000003644 ARHGAP15 (ENSMPUG00000003680) #24 KYNU (ENSMPUG00000003685) #25 ENSMPUG00000003691 ENSMPUG00000003699 American mink MODERN SPECIES 39 FSIP2 (ENSNVIG00000004537) ZC3H15 (ENSNVIG00000004514) ITGAV (ENSNVIG00000004279) LYPD6 (ENSNVIG00000004251) #14 LYPD6B (ENSNVIG00000004225) #15 KIF5C (ENSNVIG00000004193) #16 EPC2 (ENSNVIG00000004154) #18 MBD5 (ENSNVIG00000004103) #19 ORC4 (ENSNVIG00000004006) #20 ACVR2A (ENSNVIG00000003978) #21 ZEB2 (ENSNVIG00000003880) #22 GTDC1 (ENSNVIG00000003831) #23 RHG15 (ENSNVIG00000003755) #24 KYNU (ENSNVIG00000003686) #25 ENSNVIG00000003668 Artiodactyla ANCESTRAL SPECIES 13 ENSGT00940000157201 #8 ENSGT01090000260806 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00960000193288 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 Suina ANCESTRAL SPECIES 48 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT01090000260806 ENSGT00530000063686.a.a #9 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000170936 ENSGT00940000160205 #36 Pig MODERN SPECIES 6 TNFAIP6 (ENSSSCG00000023716) #8 NMI (ENSSSCG00000022011) #9 ENSSSCG00000060497 ENSSSCG00000047930 RND3 (ENSSSCG00000040445) #11 ENSSSCG00000050050 MMADHC (ENSSSCG00000028646) #13 LYPD6 (ENSSSCG00000023627) #14 LYPD6B (ENSSSCG00000015677) #15 KIF5C (ENSSSCG00000022919) #16 EPC2 (ENSSSCG00000027211) #18 MBD5 (ENSSSCG00000015667) #19 ORC4 (ENSSSCG00000015668) #20 ACVR2A (ENSSSCG00000015669) #21 ENSSSCG00000053606 ENSSSCG00000021343 #22 GTDC1 (ENSSSCG00000015670) #23 ARHGAP15 (ENSSSCG00000015671) #24 ENSSSCG00000043635 ENSSSCG00000052768 ENSSSCG00000045622 KYNU (ENSSSCG00000015673) #25 ENSSSCG00000050181 LRP1B (ENSSSCG00000023746) #26 ENSSSCG00000043342 NXPH2 (ENSSSCG00000040715) #27 SPOPL (ENSSSCG00000032198) #28 ENSSSCG00000041316 ENSSSCG00000046078 HNMT (ENSSSCG00000035195) #29 THSD7B (ENSSSCG00000040172) #31 Chacoan peccary MODERN SPECIES 130 NEB (ENSCWAG00000015808) RIF1 (ENSCWAG00000017662) #7 TNFAIP6 (ENSCWAG00000017746) #8 ENSCWAG00000017775 NMI (ENSCWAG00000017794) #9 RND3 (ENSCWAG00000017833) #11 MMADHC (ENSCWAG00000017904) #13 LYPD6 (ENSCWAG00000017934) #14 LYPD6B (ENSCWAG00000017971) #15 KIF5C (ENSCWAG00000018100) #16 EPC2 (ENSCWAG00000018158) #18 MBD5 (ENSCWAG00000018269) #19 ORC4 (ENSCWAG00000018425) #20 ACVR2A (ENSCWAG00000018473) #21 ENSCWAG00000018510 ZEB2 (ENSCWAG00000018538) #22 ENSCWAG00000018682 GTDC1 (ENSCWAG00000018711) #23 ARHGAP15 (ENSCWAG00000018864) #24 KYNU (ENSCWAG00000018949) #25 LRP1B (ENSCWAG00000019047) #26 NXPH2 (ENSCWAG00000019401) #27 SPOPL (ENSCWAG00000019425) #28 HNMT (ENSCWAG00000019443) #29 THSD7B (ENSCWAG00000019475) #31 ENSCWAG00000019657 CXCR4 (ENSCWAG00000019662) #32 DARS1 (ENSCWAG00000019676) #33 MCM6 (ENSCWAG00000019730) #34 ENSCWAG00000019773 #35 ENSCWAG00000019811 #35 Artiodactyla_a ANCESTRAL SPECIES 13 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 Camelidae ANCESTRAL SPECIES 16 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 ENSGT00940000158559 Arabian camel MODERN SPECIES 31 ENSCDRG00005021387 NMI (ENSCDRG00005021380) #9 RBM43 (ENSCDRG00005021377) #10 RND3 (ENSCDRG00005021370) #11 ENSCDRG00005021367 MMADHC (ENSCDRG00005021361) #13 LYPD6 (ENSCDRG00005021357) #14 LYPD6B (ENSCDRG00005021351) #15 KIF5C (ENSCDRG00005021347) #16 EPC2 (ENSCDRG00005021337) #18 MBD5 (ENSCDRG00005021329) #19 ORC4 (ENSCDRG00005021323) #20 ACVR2A (ENSCDRG00005021318) #21 ENSCDRG00005021315 ENSCDRG00005021311 ZEB2 (ENSCDRG00005021107) #22 GTDC1 (ENSCDRG00005021037) #23 ARHGAP15 (ENSCDRG00005021017) #24 KYNU (ENSCDRG00005021006) #25 LRP1B (ENSCDRG00005019331) #26 NXPH2 (ENSCDRG00005019171) #27 ENSCDRG00005019157 SPOPL (ENSCDRG00005019127) #28 HNMT (ENSCDRG00005019111) #29 THSD7B (ENSCDRG00005018936) #31 CXCR4 (ENSCDRG00005018891) #32 DARS1 (ENSCDRG00005018847) #33 MCM6 (ENSCDRG00005018797) #34 LCT (ENSCDRG00005018741) #35 UBXN4 (ENSCDRG00005018623) #36 R3HDM1 (ENSCDRG00005018316) #37 Alpaca MODERN SPECIES 1864 ZEB2 (ENSVPAG00000002128) #22 Artiodactyla_b ANCESTRAL SPECIES 12 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 Pecora ANCESTRAL SPECIES 24 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Yarkand deer MODERN SPECIES 26 RIF1 (ENSCHYG00000025435) #7 TNFAIP6 (ENSCHYG00000025495) #8 NMI (ENSCHYG00000025513) #9 RBM43 (ENSCHYG00000025543) #10 ENSCHYG00000025571 RND3 (ENSCHYG00000025578) #11 MMADHC (ENSCHYG00000025604) #13 ENSCHYG00000025627 #14 LYPD6B (ENSCHYG00000025655) #15 KIF5C (ENSCHYG00000008710) #16 EPC2 (ENSCHYG00000008812) #18 MBD5 (ENSCHYG00000009045) #19 ORC4 (ENSCHYG00000009235) #20 ACVR2A (ENSCHYG00000009478) #21 ENSCHYG00000009591 ZEB2 (ENSCHYG00000009791) #22 GTDC1 (ENSCHYG00000010152) #23 ARHGAP15 (ENSCHYG00000010616) #24 KYNU (ENSCHYG00000010703) #25 LRP1B (ENSCHYG00000010870) #26 ENSCHYG00000011576 NXPH2 (ENSCHYG00000011648) #27 SPOPL (ENSCHYG00000011681) #28 ENSCHYG00000011854 HNMT (ENSCHYG00000011885) #29 THSD7B (ENSCHYG00000011983) #31 ENSCHYG00000012320 ENSCHYG00000012343 CXCR4 (ENSCHYG00000012367) #32 DARS1 (ENSCHYG00000012423) #33 MCM6 (ENSCHYG00000012811) #34 Percora_a ANCESTRAL SPECIES 5 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00390000017443.k.a ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Siberian musk deer MODERN SPECIES 346 ENSMMSG00000018486 RND3 (ENSMMSG00000018506) #11 MMADHC (ENSMMSG00000018547) #13 LYPD6 (ENSMMSG00000018611) #14 LYPD6B (ENSMMSG00000018636) #15 KIF5C (ENSMMSG00000018662) #16 EPC2 (ENSMMSG00000018790) #18 ENSMMSG00000018886 MBD5 (ENSMMSG00000019026) #19 ENSMMSG00000019093 ORC4 (ENSMMSG00000019167) #20 ACVR2A (ENSMMSG00000019227) #21 ENSMMSG00000019266 ENSMMSG00000019276 ENSMMSG00000019314 ZEB2 (ENSMMSG00000019357) #22 ENSMMSG00000019525 GTDC1 (ENSMMSG00000019550) #23 ARHGAP15 (ENSMMSG00000019673) #24 KYNU (ENSMMSG00000019754) #25 ENSMMSG00000019836 LRP1B (ENSMMSG00000019882) #26 ENSMMSG00000020194 ENSMMSG00000020212 ENSMMSG00000020234 ENSMMSG00000020252 NXPH2 (ENSMMSG00000020261) #27 SPOPL (ENSMMSG00000020288) #28 HNMT (ENSMMSG00000020352) #29 ENSMMSG00000020372 THSD7B (ENSMMSG00000020400) #31 Bovidae ANCESTRAL SPECIES 8 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00940000153272.a.b.z.a.a.a.b ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00390000017443.k.a ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Caprinae ANCESTRAL SPECIES 5 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541.c #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00940000153272.a.b.z.a.a.a.b ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00390000017443.k.a ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Goat MODERN SPECIES 11 RBM43 (ENSCHIG00000019526) #10 RND3 (ENSCHIG00000022258) #11 ENSCHIG00000010348 ENSCHIG00000020042 MMADHC (ENSCHIG00000026029) #13 LYPD6 (ENSCHIG00000018947) #14 ENSCHIG00000026876 LYPD6B (ENSCHIG00000014675) #15 KIF5C (ENSCHIG00000012226) #16 EPC2 (ENSCHIG00000024313) #18 MBD5 (ENSCHIG00000008638) #19 ORC4 (ENSCHIG00000023781) #20 ACVR2A (ENSCHIG00000013353) #21 ENSCHIG00000026414 ENSCHIG00000012606 ZEB2 (ENSCHIG00000020961) #22 GTDC1 (ENSCHIG00000022649) #23 ARHGAP15 (ENSCHIG00000014079) #24 ENSCHIG00000024301 #24 KYNU (ENSCHIG00000025717) #25 ENSCHIG00000024840 LRP1B (ENSCHIG00000012788) #26 ENSCHIG00000015461 ENSCHIG00000024934 NXPH2 (ENSCHIG00000014059) #27 SPOPL (ENSCHIG00000020853) #28 HNMT (ENSCHIG00000010212) #29 ENSCHIG00000004822 THSD7B (ENSCHIG00000014355) #31 CXCR4 (ENSCHIG00000013798) #32 DARS1 (ENSCHIG00000011050) #33 Rambouillet Sheep MODERN SPECIES 11 RIF1 (ENSOARG00020024396) #7 TNFAIP6 (ENSOARG00020024645) #8 NMI (ENSOARG00020024663) #9 RBM43 (ENSOARG00020024693) #10 ENSOARG00020024716 #11 ENSOARG00020024723 RND3 (ENSOARG00020024731) #11 MMADHC (ENSOARG00020024756) #13 LYPD6 (ENSOARG00020024772) #14 LYPD6B (ENSOARG00020024784) #15 KIF5C (ENSOARG00020024809) #16 EPC2 (ENSOARG00020024888) #18 MBD5 (ENSOARG00020024911) #19 ORC4 (ENSOARG00020024976) #20 ACVR2A (ENSOARG00020025027) #21 ZEB2 (ENSOARG00020025087) #22 ARHGAP15 (ENSOARG00020025262) #24 KYNU (ENSOARG00020005939) #25 LRP1B (ENSOARG00020006148) #26 ENSOARG00020011176 NXPH2 (ENSOARG00020011226) #27 SPOPL (ENSOARG00020011256) #28 ENSOARG00020011354 HNMT (ENSOARG00020011495) #29 ENSOARG00020011562 THSD7B (ENSOARG00020011585) #31 ENSOARG00020012007 CXCR4 (ENSOARG00020012040) #32 DARS1 (ENSOARG00020012080) #33 MCM6 (ENSOARG00020012369) #34 LCT (ENSOARG00020012566) #35 Bovinae ANCESTRAL SPECIES 5 ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT01100000264677 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00510000047245.w.a.b ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00940000153272.a.b.z.a.a.a.b ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00950000183123.g.a.a.b.fb.b ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 American bison MODERN SPECIES 3244 ZEB2 (ENSBBBG00000012207) #22 GTDC1 (ENSBBBG00000001921) #23 ARHGAP15 (ENSBBBG00000012328) #24 KYNU (ENSBBBG00000012350) #25 ENSBBBG00000002337 LRP1B (ENSBBBG00000012403) #26 ENSBBBG00000012412 NXPH2 (ENSBBBG00000012418) #27 SPOPL (ENSBBBG00000012429) #28 ENSBBBG00000002376 HNMT (ENSBBBG00000002381) #29 HNRNPA1L2 (ENSBBBG00000002385) THSD7B (ENSBBBG00000012491) #31 CXCR4 (ENSBBBG00000012508) #32 DARS1 (ENSBBBG00000002399) #33 ENSBBBG00000012538 #34 Bos ANCESTRAL SPECIES 6 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT01100000264677 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00510000047245.w.a.b ENSGT00940000154940.fb.b ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00940000153272.a.b.z.a.a.a.b ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00950000183123.g.a.a.b.fb.b ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Bos_a ANCESTRAL SPECIES 4 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00940000154940.fb.b ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00940000153272.a.b.z.a.a.a.b ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00950000183123.g.a.a.b.fb.b ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Domestic yak MODERN SPECIES 11 ENSBGRG00000005845 RBM43 (ENSBGRG00000005796) #10 FAM98B (ENSBGRG00000005761) RND3 (ENSBGRG00000005710) #11 MMADHC (ENSBGRG00000005641) #13 LYPD6 (ENSBGRG00000005614) #14 LYPD6B (ENSBGRG00000005574) #15 ENSBGRG00000005565 KIF5C (ENSBGRG00000005336) #16 EPC2 (ENSBGRG00000005242) #18 MBD5 (ENSBGRG00000005195) #19 ENSBGRG00000005171 ORC4 (ENSBGRG00000005070) #20 ACVR2A (ENSBGRG00000004989) #21 ENSBGRG00000004949 ZEB2 (ENSBGRG00000004703) #22 GTDC1 (ENSBGRG00000004374) #23 ENSBGRG00000004340 ARHGAP15 (ENSBGRG00000004300) #24 KYNU (ENSBGRG00000004206) #25 ENSBGRG00000004192 LRP1B (ENSBGRG00000001782) #26 ENSBGRG00000001517 NXPH2 (ENSBGRG00000001512) #27 SPOPL (ENSBGRG00000001482) #28 ENSBGRG00000001471 ENSBGRG00000001465 ENSBGRG00000001460 HNMT (ENSBGRG00000001443) #29 ENSBGRG00000001431 THSD7B (ENSBGRG00000001374) #31 Wild yak MODERN SPECIES 343 ENSBMUG00000025323 ZEB2 (ENSBMUG00000025345) #22 Bos_b ANCESTRAL SPECIES 3 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT01100000264677 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00510000047245.w.a.b ENSGT00940000154940.fb.b ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000154276.jb.a.a.a.a.a.a.b.a.a.b.b ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00940000158921.f.a ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00510000047559.d.a ENSGT00940000159262 #31 ENSGT00950000183123.g.a.a.b.fb.b ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 Hybrid Bos Indicus MODERN SPECIES 11 RBM43 (ENSBIXG00005017876) #10 RND3 (ENSBIXG00005017847) #11 MMADHC (ENSBIXG00005017782) #13 LYPD6 (ENSBIXG00005017744) #14 LYPD6B (ENSBIXG00005017688) #15 KIF5C (ENSBIXG00005017619) #16 EPC2 (ENSBIXG00005017562) #18 MBD5 (ENSBIXG00005017469) #19 ENSBIXG00005017400 ENSBIXG00005017396 ENSBIXG00005005733 ORC4 (ENSBIXG00005017338) #20 ACVR2A (ENSBIXG00005002803) #21 ENSBIXG00005017172 ENSBIXG00005002793 ZEB2 (ENSBIXG00005017016) #22 GTDC1 (ENSBIXG00005016592) #23 ARHGAP15 (ENSBIXG00005016328) #24 KYNU (ENSBIXG00005002592) #25 ENSBIXG00005016245 LRP1B (ENSBIXG00005015953) #26 ENSBIXG00005015364 ENSBIXG00005015329 NXPH2 (ENSBIXG00005015323) #27 ENSBIXG00005015307 SPOPL (ENSBIXG00005015294) #28 HNMT (ENSBIXG00005015241) #29 ENSBIXG00005015215 THSD7B (ENSBIXG00005015144) #31 ENSBIXG00005015049 CXCR4 (ENSBIXG00005015020) #32 Cow DUPLICATION Cow MODERN SPECIES 11 TNFAIP6 (ENSBTAG00000007239) #8 NMI (ENSBTAG00000032369) #9 RBM43 (ENSBTAG00000016217) #10 RND3 (ENSBTAG00000039731) #11 MMADHC (ENSBTAG00000015962) #13 LYPD6 (ENSBTAG00000047426) #14 LYPD6B (ENSBTAG00000019683) #15 KIF5C (ENSBTAG00000018125) #16 EPC2 (ENSBTAG00000018581) #18 MBD5 (ENSBTAG00000019592) #19 PTMA (ENSBTAG00000051947) ORC4 (ENSBTAG00000015291) #20 ACVR2A (ENSBTAG00000018114) #21 ENSBTAG00000012376 ENSBTAG00000054108 ZEB2 (ENSBTAG00000048810) #22 ZEB2 (ENSBTAG00000012615) #22 GTDC1 (ENSBTAG00000001132) #23 ENSBTAG00000050589 #23 ARHGAP15 (ENSBTAG00000032289) #24 KYNU (ENSBTAG00000032277) #25 ENSBTAG00000054433 ENSBTAG00000050185 LRP1B (ENSBTAG00000024632) #26 ENSBTAG00000017629 NXPH2 (ENSBTAG00000018147) #27 SPOPL (ENSBTAG00000013455) #28 ENSBTAG00000001627 ENSBTAG00000050067 HNMT (ENSBTAG00000014432) #29 ENSBTAG00000039437 Cow MODERN SPECIES 11 NMI (ENSBTAG00000032369) #9 RBM43 (ENSBTAG00000016217) #10 RND3 (ENSBTAG00000039731) #11 MMADHC (ENSBTAG00000015962) #13 LYPD6 (ENSBTAG00000047426) #14 LYPD6B (ENSBTAG00000019683) #15 KIF5C (ENSBTAG00000018125) #16 EPC2 (ENSBTAG00000018581) #18 MBD5 (ENSBTAG00000019592) #19 PTMA (ENSBTAG00000051947) ORC4 (ENSBTAG00000015291) #20 ACVR2A (ENSBTAG00000018114) #21 ENSBTAG00000012376 ENSBTAG00000054108 ZEB2 (ENSBTAG00000048810) #22 ZEB2 (ENSBTAG00000012615) #22 GTDC1 (ENSBTAG00000001132) #23 ENSBTAG00000050589 #23 ARHGAP15 (ENSBTAG00000032289) #24 KYNU (ENSBTAG00000032277) #25 ENSBTAG00000054433 ENSBTAG00000050185 LRP1B (ENSBTAG00000024632) #26 ENSBTAG00000017629 NXPH2 (ENSBTAG00000018147) #27 SPOPL (ENSBTAG00000013455) #28 ENSBTAG00000001627 ENSBTAG00000050067 HNMT (ENSBTAG00000014432) #29 ENSBTAG00000039437 THSD7B (ENSBTAG00000044055) #31 Cetacea ANCESTRAL SPECIES 14 ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542.a #20 ENSGT00940000157233 #21 ENSGT00390000011401.ib ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 Blue whale DUPLICATION Blue whale MODERN SPECIES 18 RIF1 (ENSBMSG00010002436) #7 ENSBMSG00010002399 TNFAIP6 (ENSBMSG00010002386) #8 NMI (ENSBMSG00010002366) #9 RBM43 (ENSBMSG00010002353) #10 RND3 (ENSBMSG00010002335) #11 MMADHC (ENSBMSG00010002313) #13 LYPD6 (ENSBMSG00010002294) #14 ENSBMSG00010002277 #16 EPC2 (ENSBMSG00010002250) #18 MBD5 (ENSBMSG00010002215) #19 ENSBMSG00010002178 #20 ACVR2A (ENSBMSG00010002163) #21 ENSBMSG00010002138 ENSBMSG00010002128 ENSBMSG00010002117 #22 ENSBMSG00010002099 #22 ENSBMSG00010002077 GTDC1 (ENSBMSG00010001738) #23 ARHGAP15 (ENSBMSG00010001671) #24 KYNU (ENSBMSG00010001637) #25 LRP1B (ENSBMSG00010001555) #26 ENSBMSG00010001515 ENSBMSG00010001508 NXPH2 (ENSBMSG00010001502) #27 SPOPL (ENSBMSG00010001484) #28 HNMT (ENSBMSG00010001464) #29 ENSBMSG00010001454 THSD7B (ENSBMSG00010001387) #31 CXCR4 (ENSBMSG00010001344) #32 DARS1 (ENSBMSG00010001326) #33 Blue whale MODERN SPECIES 18 ENSBMSG00010002399 TNFAIP6 (ENSBMSG00010002386) #8 NMI (ENSBMSG00010002366) #9 RBM43 (ENSBMSG00010002353) #10 RND3 (ENSBMSG00010002335) #11 MMADHC (ENSBMSG00010002313) #13 LYPD6 (ENSBMSG00010002294) #14 ENSBMSG00010002277 #16 EPC2 (ENSBMSG00010002250) #18 MBD5 (ENSBMSG00010002215) #19 ENSBMSG00010002178 #20 ACVR2A (ENSBMSG00010002163) #21 ENSBMSG00010002138 ENSBMSG00010002128 ENSBMSG00010002117 #22 ENSBMSG00010002099 #22 ENSBMSG00010002077 GTDC1 (ENSBMSG00010001738) #23 ARHGAP15 (ENSBMSG00010001671) #24 KYNU (ENSBMSG00010001637) #25 LRP1B (ENSBMSG00010001555) #26 ENSBMSG00010001515 ENSBMSG00010001508 NXPH2 (ENSBMSG00010001502) #27 SPOPL (ENSBMSG00010001484) #28 HNMT (ENSBMSG00010001464) #29 ENSBMSG00010001454 THSD7B (ENSBMSG00010001387) #31 CXCR4 (ENSBMSG00010001344) #32 DARS1 (ENSBMSG00010001326) #33 MCM6 (ENSBMSG00010001285) #34 Odontoceti ANCESTRAL SPECIES 13 ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542.a #20 ENSGT00940000157233 #21 ENSGT00390000011401.ib ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 Odontoceti_a ANCESTRAL SPECIES 10 ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542.a #20 ENSGT00940000157233 #21 ENSGT00390000011401.ib ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 Odontoceti_b ANCESTRAL SPECIES 12 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542.a #20 ENSGT00940000157233 #21 ENSGT00900000143820 ENSGT00390000011401.ib ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 Monodontidae ANCESTRAL SPECIES 10 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542.a #20 ENSGT00940000157233 #21 ENSGT00900000143820 ENSGT00390000011401.ib ENSGT01020000230615 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 Narwhal MODERN SPECIES 302 ENSMMNG00015010594 RND3 (ENSMMNG00015010616) #11 MMADHC (ENSMMNG00015010638) #13 LYPD6 (ENSMMNG00015010654) #14 LYPD6B (ENSMMNG00015010676) #15 KIF5C (ENSMMNG00015010710) #16 EPC2 (ENSMMNG00015010756) #18 MBD5 (ENSMMNG00015010806) #19 ENSMMNG00015010860 ENSMMNG00015010890 #20 ACVR2A (ENSMMNG00015005198) #21 ENSMMNG00015005211 ENSMMNG00015005217 ENSMMNG00015005234 ENSMMNG00015005241 ZEB2 (ENSMMNG00015005275) #22 ENSMMNG00015005304 GTDC1 (ENSMMNG00015005348) #23 ARHGAP15 (ENSMMNG00015005410) #24 KYNU (ENSMMNG00015005428) #25 LRP1B (ENSMMNG00015005526) #26 NXPH2 (ENSMMNG00015005810) #27 SPOPL (ENSMMNG00015005825) #28 HNMT (ENSMMNG00015005844) #29 THSD7B (ENSMMNG00015005865) #31 CXCR4 (ENSMMNG00015005885) #32 DARS1 (ENSMMNG00015005898) #33 MCM6 (ENSMMNG00015005976) #34 LCT (ENSMMNG00015006012) #35 UBXN4 (ENSMMNG00015006041) #36 R3HDM1 (ENSMMNG00015006127) #37 Beluga whale MODERN SPECIES 84 RBM43 (ENSDLEG00000018283) #10 RND3 (ENSDLEG00000018265) #11 MMADHC (ENSDLEG00000018246) #13 LYPD6 (ENSDLEG00000018237) #14 ENSDLEG00000018220 LYPD6B (ENSDLEG00000018208) #15 KIF5C (ENSDLEG00000018081) #16 EPC2 (ENSDLEG00000018060) #18 MBD5 (ENSDLEG00000018041) #19 ORC4 (ENSDLEG00000017980) #20 ACVR2A (ENSDLEG00000017968) #21 ENSDLEG00000017961 ENSDLEG00000017945 ENSDLEG00000017936 ENSDLEG00000017923 ZEB2 (ENSDLEG00000017853) #22 ENSDLEG00000017836 GTDC1 (ENSDLEG00000017703) #23 ARHGAP15 (ENSDLEG00000017655) #24 KYNU (ENSDLEG00000017616) #25 LRP1B (ENSDLEG00000017215) #26 NXPH2 (ENSDLEG00000017199) #27 SPOPL (ENSDLEG00000017165) #28 HNMT (ENSDLEG00000017149) #29 THSD7B (ENSDLEG00000017083) #31 ENSDLEG00000017079 CXCR4 (ENSDLEG00000017074) #32 DARS (ENSDLEG00000017015) #33 MCM6 (ENSDLEG00000016985) #34 LCT (ENSDLEG00000016911) #35 UBXN4 (ENSDLEG00000016890) #36 Vaquita MODERN SPECIES 18 RND3 (ENSPSNG00000022239) #11 ENSPSNG00000022249 MMADHC (ENSPSNG00000022255) #13 LYPD6 (ENSPSNG00000022268) #14 ENSPSNG00000022273 LYPD6B (ENSPSNG00000022285) #15 KIF5C (ENSPSNG00000022304) #16 EPC2 (ENSPSNG00000022315) #18 MBD5 (ENSPSNG00000022326) #19 ENSPSNG00000022333 ENSPSNG00000009867 #20 ACVR2A (ENSPSNG00000010003) #21 ENSPSNG00000010077 ENSPSNG00000010130 ENSPSNG00000010148 ZEB2 (ENSPSNG00000010233) #22 GTDC1 (ENSPSNG00000010572) #23 ARHGAP15 (ENSPSNG00000010851) #24 KYNU (ENSPSNG00000011089) #25 LRP1B (ENSPSNG00000011597) #26 NXPH2 (ENSPSNG00000014280) #27 SPOPL (ENSPSNG00000014332) #28 HNMT (ENSPSNG00000014404) #29 THSD7B (ENSPSNG00000014532) #31 CXCR4 (ENSPSNG00000015228) #32 DARS1 (ENSPSNG00000015285) #33 MCM6 (ENSPSNG00000015366) #34 LCT (ENSPSNG00000015477) #35 UBXN4 (ENSPSNG00000015726) #36 R3HDM1 (ENSPSNG00000015949) #37 ZRANB3 (ENSPSNG00000016864) Dolphin MODERN SPECIES 4992 ZEB2 (ENSTTRG00000006478) #22 Sperm whale MODERN SPECIES 11 NMI (ENSPCTG00005001633) #9 RBM43 (ENSPCTG00005001620) #10 ENSPCTG00005001612 RND3 (ENSPCTG00005001596) #11 MMADHC (ENSPCTG00005001565) #13 LYPD6 (ENSPCTG00005001545) #14 LYPD6B (ENSPCTG00005001526) #15 KIF5C (ENSPCTG00005001462) #16 EPC2 (ENSPCTG00005001424) #18 MBD5 (ENSPCTG00005001400) #19 ORC4 (ENSPCTG00005001367) #20 ACVR2A (ENSPCTG00005001345) #21 ENSPCTG00005001332 ENSPCTG00005001317 ENSPCTG00005001311 ZEB2 (ENSPCTG00005001256) #22 ENSPCTG00005001214 GTDC1 (ENSPCTG00005001099) #23 ARHGAP15 (ENSPCTG00005001030) #24 KYNU (ENSPCTG00005000984) #25 ENSPCTG00005000956 LRP1B (ENSPCTG00005000809) #26 ENSPCTG00005000761 NXPH2 (ENSPCTG00005000755) #27 SPOPL (ENSPCTG00005000729) #28 HNMT (ENSPCTG00005000712) #29 ENSPCTG00005000701 THSD7B (ENSPCTG00005000463) #31 ENSPCTG00005000398 CXCR4 (ENSPCTG00005000384) #32 DARS1 (ENSPCTG00005000347) #33 Atlantogenata ANCESTRAL SPECIES 9 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 Xenarthra ANCESTRAL SPECIES 826 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 Sloth MODERN SPECIES 5753 ZEB2 (ENSCHOG00000001435) #22 Armadillo MODERN SPECIES 4151 MBD5 (ENSDNOG00000017491) #19 ENSDNOG00000040740 ORC4 (ENSDNOG00000009805) #20 ACVR2A (ENSDNOG00000009781) #21 ZEB2 (ENSDNOG00000039558) #22 GTDC1 (ENSDNOG00000033624) #23 ARHGAP15 (ENSDNOG00000014973) #24 KYNU (ENSDNOG00000037199) #25 Afrotheria ANCESTRAL SPECIES 1 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 Tenrec MODERN SPECIES 6285 ZEB2 (ENSETEG00000003283) #22 Afrotheria_a ANCESTRAL SPECIES 1 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 ENSGT00940000156095 #37 Elephant MODERN SPECIES 301 RIF1 (ENSLAFG00000009796) #7 TNFAIP6 (ENSLAFG00000009790) #8 NMI (ENSLAFG00000012842) #9 RBM43 (ENSLAFG00000010512) #10 RND3 (ENSLAFG00000010712) #11 MMADHC (ENSLAFG00000016977) #13 LYPD6 (ENSLAFG00000014710) #14 LYPD6B (ENSLAFG00000007340) #15 KIF5C (ENSLAFG00000005632) #16 EPC2 (ENSLAFG00000014312) #18 ENSLAFG00000001900 #19 ENSLAFG00000030020 #19 ORC4 (ENSLAFG00000002631) #20 ACVR2A (ENSLAFG00000002628) #21 ENSLAFG00000032780 ZEB2 (ENSLAFG00000008960) #22 GTDC1 (ENSLAFG00000010261) #23 ARHGAP15 (ENSLAFG00000006748) #24 KYNU (ENSLAFG00000002172) #25 ENSLAFG00000029177 LRP1B (ENSLAFG00000014282) #26 NXPH2 (ENSLAFG00000011361) #27 SPOPL (ENSLAFG00000001640) #28 HNMT (ENSLAFG00000010262) #29 THSD7B (ENSLAFG00000010588) #31 CXCR4 (ENSLAFG00000006285) #32 DARS1 (ENSLAFG00000015092) #33 MCM6 (ENSLAFG00000009089) #34 LCT (ENSLAFG00000009081) #35 UBXN4 (ENSLAFG00000009074) #36 R3HDM1 (ENSLAFG00000009065) #37 Hyrax MODERN SPECIES 10071 ZEB2 (ENSPCAG00000014674) #22 Marsupialia ANCESTRAL SPECIES 5 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00390000017405.j ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000166747 Opossum MODERN SPECIES 3 ENSMODG00000003594 #9 ENSMODG00000003581 #10 RND3 (ENSMODG00000003575) #11 ENSMODG00000043542 MMADHC (ENSMODG00000003566) #13 ENSMODG00000003546 LYPD6 (ENSMODG00000003553) #14 LYPD6B (ENSMODG00000048295) #15 ENSMODG00000039281 KIF5C (ENSMODG00000003526) #16 EPC2 (ENSMODG00000003447) #18 MBD5 (ENSMODG00000003415) #19 ORC4 (ENSMODG00000003327) #20 ACVR2A (ENSMODG00000003295) #21 ENSMODG00000038179 ZEB2 (ENSMODG00000003112) #22 ENSMODG00000039463 GTDC1 (ENSMODG00000003084) #23 ARHGAP15 (ENSMODG00000003016) #24 KYNU (ENSMODG00000002997) #25 ENSMODG00000042134 LRP1B (ENSMODG00000002847) #26 ENSMODG00000050463 ENSMODG00000043501 NXPH2 (ENSMODG00000001201) #27 SPOPL (ENSMODG00000001195) #28 ENSMODG00000027661 ENSMODG00000036842 #29 THSD7B (ENSMODG00000001131) #31 ENSMODG00000047561 ENSMODG00000042094 Marsupialia_b ANCESTRAL SPECIES 3 ENSGT00440000034341 ENSGT01030000234556.b.a ENSGT01030000234556.b.b.c ENSGT01020000230389.a.a.a ENSGT00670000099483 ENSGT00510000048847 ENSGT00940000159197 ENSGT00940000153062.B ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00390000017405.j ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000166747 ENSGT00940000155324 #35 Diprotodontia ANCESTRAL SPECIES 40 ENSGT01030000234556.b.a ENSGT01030000234556.b.b.c ENSGT00940000176135 ENSGT01020000230389.a.a.a ENSGT00670000099483 ENSGT00510000048847 ENSGT00940000159197 ENSGT00940000153062.B ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00390000017405.j ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000166747 ENSGT00940000155324 #35 ENSGT00940000160205 #36 Diprotodontia_a ANCESTRAL SPECIES 39 ENSGT00440000034341 ENSGT01030000234556.b.a ENSGT01030000234556.b.b.c ENSGT01020000230389.a.a.a ENSGT00670000099483 ENSGT00510000048847 ENSGT00940000159197 ENSGT00940000153062.B ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00390000017405.j ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000166747 ENSGT00940000155324 #35 ENSGT00940000160205 #36 koala MODERN SPECIES 18 ENSPCIG00000011982 ENSPCIG00000011980 FXYD6 (ENSPCIG00000033414) LYPD6 (ENSPCIG00000000199) #14 LYPD6B (ENSPCIG00000028557) #15 KIF5C (ENSPCIG00000028554) #16 ENSPCIG00000028553 EPC2 (ENSPCIG00000028543) #18 ENSPCIG00000033245 ENSPCIG00000028541 MBD5 (ENSPCIG00000028539) #19 ENSPCIG00000028537 ORC4 (ENSPCIG00000006936) #20 ACVR2A (ENSPCIG00000006937) #21 ENSPCIG00000037150 ZEB2 (ENSPCIG00000011418) #22 GTDC1 (ENSPCIG00000011412) #23 ENSPCIG00000011411 ARHGAP15 (ENSPCIG00000011353) #24 KYNU (ENSPCIG00000007256) #25 LRP1B (ENSPCIG00000021710) #26 ENSPCIG00000007650 ENSPCIG00000007655 Common wonbat MODERN SPECIES 1052 SCN2B (ENSVURG00010005116) SCN4B (ENSVURG00010005122) ENSVURG00010005130 SMIM35 (ENSVURG00010005136) ENSVURG00010005143 TMPRSS13 (ENSVURG00010005161) ENSVURG00010005180 LYPD6 (ENSVURG00010005208) #14 LYPD6B (ENSVURG00010005227) #15 KIF5C (ENSVURG00010005247) #16 EPC2 (ENSVURG00010005272) #18 ENSVURG00010005301 MBD5 (ENSVURG00010005310) #19 ORC4 (ENSVURG00010005361) #20 ACVR2A (ENSVURG00010005383) #21 ZEB2 (ENSVURG00010005459) #22 GTDC1 (ENSVURG00010005548) #23 ARHGAP15 (ENSVURG00010005719) #24 KYNU (ENSVURG00010005735) #25 LRP1B (ENSVURG00010005875) #26 ENSVURG00010006058 ENSVURG00010006068 NXPH2 (ENSVURG00010006116) #27 SPOPL (ENSVURG00010006130) #28 HNMT (ENSVURG00010006155) #29 THSD7B (ENSVURG00010006259) #31 CXCR4 (ENSVURG00010006950) #32 DARS1 (ENSVURG00010006955) #33 MCM6 (ENSVURG00010006973) #34 ENSVURG00010006984 #35 UBXN4 (ENSVURG00010006987) #36 Wallaby MODERN SPECIES 7798 ZEB2 (ENSMEUG00000008997) #22 Tasmanian devil MODERN SPECIES 2 ENSSHAG00000014063 SCN2B (ENSSHAG00000030462) SCN4B (ENSSHAG00000022045) TMPRSS4 (ENSSHAG00000014461) SMIM35 (ENSSHAG00000032237) ENSSHAG00000029297 ENSSHAG00000004622 ENSSHAG00000029800 ENSSHAG00000028690 #14 LYPD6B (ENSSHAG00000012307) #15 KIF5C (ENSSHAG00000010332) #16 EPC2 (ENSSHAG00000008294) #18 MBD5 (ENSSHAG00000002961) #19 ORC4 (ENSSHAG00000010772) #20 ACVR2A (ENSSHAG00000010152) #21 ZEB2 (ENSSHAG00000016692) #22 GTDC1 (ENSSHAG00000015344) #23 ARHGAP15 (ENSSHAG00000010666) #24 KYNU (ENSSHAG00000009141) #25 LRP1B (ENSSHAG00000004225) #26 ENSSHAG00000025518 ENSSHAG00000031146 NXPH2 (ENSSHAG00000024763) #27 SPOPL (ENSSHAG00000014908) #28 HNMT (ENSSHAG00000030767) #29 THSD7B (ENSSHAG00000026453) #31 CXCR4 (ENSSHAG00000008142) #32 DARS1 (ENSSHAG00000001175) #33 MCM6 (ENSSHAG00000000346) #34 LCT (ENSSHAG00000017319) #35 ENSSHAG00000017244 Platypus MODERN SPECIES 20 NEB (ENSOANG00000006081) RIF1 (ENSOANG00000006078) #7 TNFAIP6 (ENSOANG00000037517) #8 ENSOANG00000006075 #9 RND3 (ENSOANG00000038274) #11 MMADHC (ENSOANG00000006072) #13 LYPD6 (ENSOANG00000043367) #14 LYPD6B (ENSOANG00000042916) #15 KIF5C (ENSOANG00000011829) #16 EPC2 (ENSOANG00000006066) #18 ENSOANG00000044970 #19 ENSOANG00000040740 #19 ENSOANG00000050510 ORC4 (ENSOANG00000008383) #20 ACVR2A (ENSOANG00000008384) #21 ZEB2 (ENSOANG00000011947) #22 GTDC1 (ENSOANG00000011982) #23 ARHGAP15 (ENSOANG00000011983) #24 KYNU (ENSOANG00000045440) #25 LRP1B (ENSOANG00000007998) #26 NXPH2 (ENSOANG00000007997) #27 SPOPL (ENSOANG00000050049) #28 HNMT (ENSOANG00000007995) #29 ENSOANG00000048355 #29 THSD7B (ENSOANG00000007994) #31 ENSOANG00000041192 CXCR4 (ENSOANG00000007993) #32 DARS1 (ENSOANG00000007989) #33 MCM6 (ENSOANG00000007988) #34 LCT (ENSOANG00000007555) #35 ENSOANG00000007554 Sauria ANCESTRAL SPECIES ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT01000000220430 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Lepidosauria ANCESTRAL SPECIES 7 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT01000000220430 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631.j #23 ENSGT00950000182860.a.b.b #24 ENSGT00940000181338 ENSGT00390000008033 #25 ENSGT00900000142862 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Episquamata ANCESTRAL SPECIES ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631.j #23 ENSGT00950000182860.a.b.b #24 ENSGT00940000181338 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000166747 Laterata ANCESTRAL SPECIES 2 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631.j #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000166747 ENSGT00940000155324 #35 Common wall lizard MODERN SPECIES RBM43 (ENSPMRG00000001735) #10 RND3 (ENSPMRG00000001723) #11 ENSPMRG00000001719 ENSPMRG00000001715 ENSPMRG00000001698 MMADHC (ENSPMRG00000001693) #13 LYPD6 (ENSPMRG00000001684) #14 LYPD6B (ENSPMRG00000001678) #15 ENSPMRG00000001673 KIF5C (ENSPMRG00000000646) #16 EPC2 (ENSPMRG00000000137) #18 MBD5 (ENSPMRG00000000124) #19 ORC4 (ENSPMRG00000000110) #20 ACVR2A (ENSPMRG00000000096) #21 ENSPMRG00000007491 ZEB2 (ENSPMRG00000007466) #22 GTDC1 (ENSPMRG00000007431) #23 ARHGAP15 (ENSPMRG00000007392) #24 ENSPMRG00000007371 #25 ENSPMRG00000007325 #25 ENSPMRG00000007298 LRP1B (ENSPMRG00000007211) #26 ENSPMRG00000007042 ENSPMRG00000006988 SPOPL (ENSPMRG00000006977) #28 ENSPMRG00000006970 HNMT (ENSPMRG00000006961) #29 ENSPMRG00000006948 #29 THSD7B (ENSPMRG00000006906) #31 CXCR4 (ENSPMRG00000006895) #32 DARS1 (ENSPMRG00000006884) #33 Argentine black and white tegu MODERN SPECIES 20 NEB (ENSSMRG00000023318) RIF1 (ENSSMRG00000023454) #7 TNFAIP6 (ENSSMRG00000023455) #8 ENSSMRG00000023456 #9 RBM43 (ENSSMRG00000023457) #10 RND3 (ENSSMRG00000023459) #11 MMADHC (ENSSMRG00000023460) #13 LYPD6 (ENSSMRG00000023461) #14 LYPD6B (ENSSMRG00000023462) #15 ENSSMRG00000023463 KIF5C (ENSSMRG00000023464) #16 EPC2 (ENSSMRG00000023465) #18 MBD5 (ENSSMRG00000023466) #19 ORC4 (ENSSMRG00000023467) #20 ACVR2A (ENSSMRG00000023468) #21 ZEB2 (ENSSMRG00000023477) #22 GTDC1 (ENSSMRG00000023478) #23 ARHGAP15 (ENSSMRG00000023481) #24 KYNU (ENSSMRG00000023482) #25 LRP1B (ENSSMRG00000023483) #26 ENSSMRG00000023485 ENSSMRG00000023486 NXPH2 (ENSSMRG00000023487) #27 ENSSMRG00000023489 SPOPL (ENSSMRG00000023490) #28 HNMT (ENSSMRG00000023491) #29 ENSSMRG00000023492 #29 THSD7B (ENSSMRG00000023493) #31 ENSSMRG00000023495 POLR3F (ENSSMRG00000023496) ENSSMRG00000023497 Toxicofera ANCESTRAL SPECIES 10 ENSGT00940000154714 ENSGT00940000154533.b.d.q ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631.j #23 ENSGT00950000182860.a.b.b #24 ENSGT00940000181338 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00940000160835 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Elapidae DUPLICATION Elapidae DUPLICATION Elapidae ANCESTRAL SPECIES 156 ENSGT00950000183208.A.c.a.g.a #22 ENSGT00390000006631.i #23 Elapidae_a ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.g.a #22 Blue-lipped sea krait MODERN SPECIES 3520 ENSLLTG00000002281 #22 Indian cobra MODERN SPECIES ARL5A (ENSNNAG00000018385) NEB (ENSNNAG00000018647) TNFAIP6 (ENSNNAG00000019067) #8 NMI (ENSNNAG00000019069) #9 RND3 (ENSNNAG00000019074) #11 ENSNNAG00000019076 MMADHC (ENSNNAG00000019078) #13 LYPD6 (ENSNNAG00000006713) #14 LYPD6B (ENSNNAG00000006750) #15 ENSNNAG00000006910 KIF5C (ENSNNAG00000007202) #16 EPC2 (ENSNNAG00000012958) #18 MBD5 (ENSNNAG00000013008) #19 ORC4 (ENSNNAG00000013093) #20 ACVR2A (ENSNNAG00000013129) #21 ZEB2 (ENSNNAG00000013202) #22 ENSNNAG00000013247 #23 GTDC1 (ENSNNAG00000013283) #23 ARHGAP15 (ENSNNAG00000013349) #24 ENSNNAG00000013365 KYNU (ENSNNAG00000013382) #25 LRP1B (ENSNNAG00000013416) #26 ENSNNAG00000013673 ENSNNAG00000013733 NXPH2 (ENSNNAG00000013743) #27 SPOPL (ENSNNAG00000013754) #28 HNMT (ENSNNAG00000013815) #29 THSD7B (ENSNNAG00000013843) #31 CXCR4 (ENSNNAG00000014170) #32 DARS1 (ENSNNAG00000014185) #33 MCM6 (ENSNNAG00000014241) #34 Elapidae ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.g.b #22 Elapidae_a ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.g.b #22 Blue-lipped sea krait MODERN SPECIES 6887 ENSLLTG00000015571 #22 Elapidae ANCESTRAL SPECIES ENSGT00940000154714 ENSGT00940000154533.b.d.q ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00940000157541 #11 ENSGT00940000164219.a.a.a.c.b ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a.h #22 ENSGT00390000006631.j #23 ENSGT00950000182860.a.b.b #24 ENSGT00940000181338 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00940000160835 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Elapidae_a ANCESTRAL SPECIES 5 ENSGT00940000154714 ENSGT00940000154533.b.d.q ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00940000157541 #11 ENSGT00940000164219.a.a.a.c.b ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542.f #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a.h #22 ENSGT00390000006631.j #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00940000160835 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000166747 Acanthophiinae ANCESTRAL SPECIES 7 ENSGT00940000154714 ENSGT00940000154533.b.d.q ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00940000157541 #11 ENSGT00940000164219.a.a.a.c.b ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542.f #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a.h #22 ENSGT00390000006631.j #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00940000160835 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000166747 Mainland tiger snake MODERN SPECIES 54 LYPD6B (ENSNSUG00000010077) #15 KIF5C (ENSNSUG00000010078) #16 ENSNSUG00000010080 EPC2 (ENSNSUG00000010082) #18 MBD5 (ENSNSUG00000010160) #19 ORC4 (ENSNSUG00000010166) #20 ACVR2A (ENSNSUG00000010179) #21 ZEB2 (ENSNSUG00000010193) #22 GTDC1 (ENSNSUG00000010356) #23 ARHGAP15 (ENSNSUG00000010357) #24 KYNU (ENSNSUG00000010362) #25 LRP1B (ENSNSUG00000010366) #26 ENSNSUG00000010371 ENSNSUG00000010372 ENSNSUG00000010373 NXPH2 (ENSNSUG00000010374) #27 SPOPL (ENSNSUG00000010377) #28 HNMT (ENSNSUG00000010378) #29 THSD7B (ENSNSUG00000010381) #31 Eastern brown snake MODERN SPECIES 98 ZEB2 (ENSPTXG00000012562) #22 GTDC1 (ENSPTXG00000012561) #23 ARHGAP15 (ENSPTXG00000012527) #24 KYNU (ENSPTXG00000012526) #25 ENSPTXG00000012525 ENSPTXG00000012524 LRP1B (ENSPTXG00000012523) #26 Lizard MODERN SPECIES ENSACAG00000044585 MAT2B (ENSACAG00000028511) HMMR (ENSACAG00000029328) NUDCD2 (ENSACAG00000028809) CCNG1 (ENSACAG00000014615) ENSACAG00000040089 ENSACAG00000044587 ENSACAG00000014657 GABRG2 (ENSACAG00000014692) GABRA1 (ENSACAG00000014898) GABRA6 (ENSACAG00000015043) GABRB2 (ENSACAG00000015134) ENSACAG00000002540 ENSACAG00000042245 ENSACAG00000037056 ZEB2 (ENSACAG00000023811) #22 GTDC1 (ENSACAG00000003082) #23 ARHGAP15 (ENSACAG00000003110) #24 KYNU (ENSACAG00000003164) #25 ENSACAG00000038880 LRP1B (ENSACAG00000003221) #26 ENSACAG00000041166 ENSACAG00000003521 ENSACAG00000042491 NXPH2 (ENSACAG00000000334) #27 SPOPL (ENSACAG00000000338) #28 HNMT (ENSACAG00000037643) #29 ENSACAG00000029670 #29 THSD7B (ENSACAG00000000545) #31 ENSACAG00000039047 CXCR4 (ENSACAG00000000795) #32 tuatara DUPLICATION tuatara MODERN SPECIES 823 ENSSPUG00000007767 #22 ENSSPUG00000008037 #22 GTDC1 (ENSSPUG00000008049) #23 ARHGAP15 (ENSSPUG00000008099) #24 ENSSPUG00000008209 KYNU (ENSSPUG00000008214) #25 ENSSPUG00000008227 LRP1B (ENSSPUG00000008249) #26 tuatara MODERN SPECIES 823 ENSSPUG00000007767 #22 ENSSPUG00000008037 #22 GTDC1 (ENSSPUG00000008049) #23 ARHGAP15 (ENSSPUG00000008099) #24 ENSSPUG00000008209 KYNU (ENSSPUG00000008214) #25 ENSSPUG00000008227 LRP1B (ENSSPUG00000008249) #26 Archelosauria ANCESTRAL SPECIES 8 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Cryptodira ANCESTRAL SPECIES 5 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000166747 ENSGT00940000155324 #35 Testudinoidea ANCESTRAL SPECIES 11 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542.j #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000166747 ENSGT00940000155324 #35 Testudinidae ANCESTRAL SPECIES 8 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542.j #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631.g #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000166747 ENSGT00940000155324 #35 Goode s thornscrub tortoise MODERN SPECIES 2 NEB (ENSGEVG00005020817) RIF1 (ENSGEVG00005020864) #7 TNFAIP6 (ENSGEVG00005020884) #8 NMI (ENSGEVG00005020889) #9 RBM43 (ENSGEVG00005020902) #10 RND3 (ENSGEVG00005020917) #11 ENSGEVG00005020925 MMADHC (ENSGEVG00005020928) #13 LYPD6 (ENSGEVG00005020933) #14 LYPD6B (ENSGEVG00005020935) #15 KIF5C (ENSGEVG00005020950) #16 EPC2 (ENSGEVG00005020958) #18 MBD5 (ENSGEVG00005020959) #19 ORC4 (ENSGEVG00005020967) #20 ACVR2A (ENSGEVG00005020977) #21 ZEB2 (ENSGEVG00005020983) #22 GTDC1 (ENSGEVG00005020989) #23 ARHGAP15 (ENSGEVG00005020993) #24 KYNU (ENSGEVG00005021006) #25 LRP1B (ENSGEVG00005021016) #26 ENSGEVG00005021033 ENSGEVG00005021039 ENSGEVG00005021042 NXPH2 (ENSGEVG00005021046) #27 SPOPL (ENSGEVG00005021047) #28 HNMT (ENSGEVG00005021050) #29 THSD7B (ENSGEVG00005021056) #31 CXCR4 (ENSGEVG00005021063) #32 DARS1 (ENSGEVG00005021065) #33 MCM6 (ENSGEVG00005021067) #34 ENSGEVG00005021068 Abingdon island giant tortoise MODERN SPECIES 365 ZEB2 (ENSCABG00000011719) #22 ENSCABG00000011730 #23 Emydidae ANCESTRAL SPECIES 4 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542.j #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000166747 ENSGT00940000155324 #35 painted turtle MODERN SPECIES 796 TBC1D15 (ENSCPBG00000005426) TPH2 (ENSCPBG00000000994) TRHDE (ENSCPBG00000000715) ZEB2 (ENSCPBG00000000598) #22 GTDC1 (ENSCPBG00000000510) #23 ARHGAP15 (ENSCPBG00000000440) #24 KYNU (ENSCPBG00000000379) #25 Three-toed box turtle MODERN SPECIES 25 ARL5A (ENSTMTG00000022372) NEB (ENSTMTG00000016118) RIF1 (ENSTMTG00000013981) #7 NMI (ENSTMTG00000013868) #9 RBM43 (ENSTMTG00000013865) #10 RND3 (ENSTMTG00000013856) #11 MMADHC (ENSTMTG00000013842) #13 LYPD6 (ENSTMTG00000013835) #14 LYPD6B (ENSTMTG00000013809) #15 KIF5C (ENSTMTG00000013757) #16 EPC2 (ENSTMTG00000013718) #18 MBD5 (ENSTMTG00000013709) #19 ORC4 (ENSTMTG00000013683) #20 ACVR2A (ENSTMTG00000013661) #21 ENSTMTG00000013650 ZEB2 (ENSTMTG00000013632) #22 GTDC1 (ENSTMTG00000013582) #23 ARHGAP15 (ENSTMTG00000013531) #24 KYNU (ENSTMTG00000013497) #25 LRP1B (ENSTMTG00000013281) #26 ENSTMTG00000013165 ENSTMTG00000013143 NXPH2 (ENSTMTG00000013135) #27 SPOPL (ENSTMTG00000013108) #28 HNMT (ENSTMTG00000013096) #29 THSD7B (ENSTMTG00000012697) #31 CXCR4 (ENSTMTG00000012638) #32 DARS1 (ENSTMTG00000012624) #33 MCM6 (ENSTMTG00000014960) #34 ENSTMTG00000014910 ENSTMTG00000014903 #35 Chinese turtle MODERN SPECIES 2062 KIF5C (ENSPSIG00000008103) #16 EPC2 (ENSPSIG00000007324) #18 MBD5 (ENSPSIG00000007316) #19 ENSPSIG00000007307 ENSPSIG00000007291 ORC4 (ENSPSIG00000006933) #20 ENSPSIG00000006916 ACVR2A (ENSPSIG00000017364) #21 ENSPSIG00000001099 ZEB2 (ENSPSIG00000016788) #22 GTDC1 (ENSPSIG00000016771) #23 ARHGAP15 (ENSPSIG00000016658) #24 ENSPSIG00000016520 #25 ENSPSIG00000016260 #25 Archosauria ANCESTRAL SPECIES 6 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Australian saltwater crocodile MODERN SPECIES 66 ENSCPRG00005008458 RIF1 (ENSCPRG00005008380) #7 TNFAIP6 (ENSCPRG00005008363) #8 NMI (ENSCPRG00005008353) #9 RBM43 (ENSCPRG00005008350) #10 RND3 (ENSCPRG00005008330) #11 MMADHC (ENSCPRG00005008285) #13 LYPD6 (ENSCPRG00005008268) #14 LYPD6B (ENSCPRG00005008266) #15 KIF5C (ENSCPRG00005007708) #16 EPC2 (ENSCPRG00005007668) #18 MBD5 (ENSCPRG00005007665) #19 ORC4 (ENSCPRG00005007654) #20 ACVR2A (ENSCPRG00005007643) #21 ENSCPRG00005007629 ZEB2 (ENSCPRG00005007598) #22 GTDC1 (ENSCPRG00005007582) #23 ENSCPRG00005007562 ARHGAP15 (ENSCPRG00005007510) #24 ENSCPRG00005007469 KYNU (ENSCPRG00005007454) #25 LRP1B (ENSCPRG00005005815) #26 ENSCPRG00005005002 NXPH2 (ENSCPRG00005004987) #27 SPOPL (ENSCPRG00005004973) #28 ENSCPRG00005004971 HNMT (ENSCPRG00005004963) #29 ENSCPRG00005004950 #29 ENSCPRG00005004946 THSD7B (ENSCPRG00005004920) #31 CXCR4 (ENSCPRG00005004904) #32 Aves ANCESTRAL SPECIES 8 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 African ostrich MODERN SPECIES 695 ORC4 (ENSSCUG00000013987) #20 ACVR2A (ENSSCUG00000013989) #21 ZEB2 (ENSSCUG00000014041) #22 GTDC1 (ENSSCUG00000014063) #23 ARHGAP15 (ENSSCUG00000014071) #24 KYNU (ENSSCUG00000014075) #25 ENSSCUG00000014086 LRP1B (ENSSCUG00000014116) #26 ENSSCUG00000014175 NXPH2 (ENSSCUG00000014198) #27 SPOPL (ENSSCUG00000014202) #28 HNMT (ENSSCUG00000014206) #29 ENSSCUG00000014208 #29 THSD7B (ENSSCUG00000014244) #31 CXCR4 (ENSSCUG00000014286) #32 DARS1 (ENSSCUG00000014287) #33 MCM6 (ENSSCUG00000014301) #34 LCT (ENSSCUG00000014317) #35 Neognathae ANCESTRAL SPECIES 6 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Neognathae_b ANCESTRAL SPECIES 7 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00960000189410 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Passeriformes ANCESTRAL SPECIES 6 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00960000189410 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Passeriformes_d ANCESTRAL SPECIES 8 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00960000189410 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324.ab.b #35 Passeriformes_g ANCESTRAL SPECIES 9 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542.h #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00960000189410 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324.ab.b #35 Medium ground finch MODERN SPECIES 1 NMI (ENSGFOG00000005782) #9 RBM43 (ENSGFOG00000005798) #10 RND3 (ENSGFOG00000005858) #11 ENSGFOG00000005861 MMADHC (ENSGFOG00000005864) #13 LYPD6 (ENSGFOG00000005872) #14 LYPD6B (ENSGFOG00000005878) #15 KIF5C (ENSGFOG00000005880) #16 EPC2 (ENSGFOG00000005891) #18 ENSGFOG00000005897 ENSGFOG00000005904 #20 ENSGFOG00000005920 #20 ACVR2A (ENSGFOG00000005925) #21 ZEB2 (ENSGFOG00000000020) #22 GTDC1 (ENSGFOG00000000024) #23 ARHGAP15 (ENSGFOG00000000095) #24 KYNU (ENSGFOG00000000105) #25 LRP1B (ENSGFOG00000000311) #26 ENSGFOG00000002046 NXPH2 (ENSGFOG00000002058) #27 SPOPL (ENSGFOG00000002067) #28 HNMT (ENSGFOG00000002079) #29 ENSGFOG00000002088 #29 THSD7B (ENSGFOG00000002128) #31 CXCR4 (ENSGFOG00000002308) #32 DARS1 (ENSGFOG00000002321) #33 MCM6 (ENSGFOG00000002438) #34 LCT (ENSGFOG00000003565) #35 UBXN4 (ENSGFOG00000003676) #36 Passeroidea ANCESTRAL SPECIES 8 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542.h #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00960000189410 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324.ab.b #35 Zebra finch MODERN SPECIES 29 RBM43 (ENSTGUG00000011995) #10 ENSTGUG00000021053 ENSTGUG00000028378 RND3 (ENSTGUG00000011991) #11 MMADHC (ENSTGUG00000011984) #13 ENSTGUG00000028714 LYPD6 (ENSTGUG00000011981) #14 ENSTGUG00000019485 LYPD6B (ENSTGUG00000020162) #15 KIF5C (ENSTGUG00000011950) #16 EPC2 (ENSTGUG00000011944) #18 MBD5 (ENSTGUG00000011939) #19 ENSTGUG00000021808 ORC4 (ENSTGUG00000011929) #20 ACVR2A (ENSTGUG00000011916) #21 ZEB2 (ENSTGUG00000011904) #22 GTDC1 (ENSTGUG00000011902) #23 ARHGAP15 (ENSTGUG00000011883) #24 KYNU (ENSTGUG00000011872) #25 LRP1B (ENSTGUG00000011849) #26 ENSTGUG00000019269 ENSTGUG00000011843 NXPH2 (ENSTGUG00000011842) #27 SPOPL (ENSTGUG00000011840) #28 HNMT (ENSTGUG00000011836) #29 ENSTGUG00000011829 #29 THSD7B (ENSTGUG00000011824) #31 CXCR4 (ENSTGUG00000011822) #32 DARS1 (ENSTGUG00000011810) #33 MCM6 (ENSTGUG00000011790) #34 ENSTGUG00000019584 #35 Common canary MODERN SPECIES 8 TNFAIP6 (ENSSCAG00000008054) #8 NMI (ENSSCAG00000008060) #9 RBM43 (ENSSCAG00000008064) #10 ENSSCAG00000008066 RND3 (ENSSCAG00000008070) #11 ENSSCAG00000008077 MMADHC (ENSSCAG00000008081) #13 LYPD6 (ENSSCAG00000008089) #14 ENSSCAG00000008098 LYPD6B (ENSSCAG00000008103) #15 KIF5C (ENSSCAG00000008117) #16 EPC2 (ENSSCAG00000008145) #18 MBD5 (ENSSCAG00000008168) #19 ORC4 (ENSSCAG00000008247) #20 ACVR2A (ENSSCAG00000008262) #21 ZEB2 (ENSSCAG00000008306) #22 ENSSCAG00000008312 GTDC1 (ENSSCAG00000008330) #23 ARHGAP15 (ENSSCAG00000008352) #24 KYNU (ENSSCAG00000008360) #25 LRP1B (ENSSCAG00000008544) #26 ENSSCAG00000009974 ENSSCAG00000009989 NXPH2 (ENSSCAG00000009997) #27 SPOPL (ENSSCAG00000010004) #28 HNMT (ENSSCAG00000010007) #29 ENSSCAG00000010011 #29 THSD7B (ENSSCAG00000010047) #31 CXCR4 (ENSSCAG00000010153) #32 DARS1 (ENSSCAG00000010155) #33 MCM6 (ENSSCAG00000010162) #34 Flycatcher MODERN SPECIES 26 ARL5A (ENSFALG00000023620) NEB (ENSFALG00000013894) RIF1 (ENSFALG00000013874) #7 TNFAIP6 (ENSFALG00000013873) #8 NMI (ENSFALG00000013870) #9 RBM43 (ENSFALG00000013867) #10 RND3 (ENSFALG00000013866) #11 MMADHC (ENSFALG00000023718) #13 LYPD6 (ENSFALG00000027300) #14 LYPD6B (ENSFALG00000013863) #15 KIF5C (ENSFALG00000024506) #16 ENSFALG00000028125 #19 ENSFALG00000013858 #19 ORC4 (ENSFALG00000013856) #20 ACVR2A (ENSFALG00000013851) #21 ZEB2 (ENSFALG00000013846) #22 GTDC1 (ENSFALG00000013845) #23 ARHGAP15 (ENSFALG00000013843) #24 KYNU (ENSFALG00000013835) #25 ENSFALG00000027773 LRP1B (ENSFALG00000013809) #26 ENSFALG00000027337 ENSFALG00000025359 ENSFALG00000026459 NXPH2 (ENSFALG00000014098) #27 SPOPL (ENSFALG00000025445) #28 HNMT (ENSFALG00000013782) #29 ENSFALG00000013777 #29 THSD7B (ENSFALG00000013768) #31 CXCR4 (ENSFALG00000013763) #32 DARS1 (ENSFALG00000013752) #33 Great tit MODERN SPECIES 27 ARL5A (ENSPMJG00000000061) NEB (ENSPMJG00000020007) RIF1 (ENSPMJG00000020006) #7 TNFAIP6 (ENSPMJG00000020005) #8 NMI (ENSPMJG00000020004) #9 RBM43 (ENSPMJG00000020003) #10 RND3 (ENSPMJG00000020001) #11 MMADHC (ENSPMJG00000020000) #13 LYPD6 (ENSPMJG00000019999) #14 LYPD6B (ENSPMJG00000019998) #15 KIF5C (ENSPMJG00000019997) #16 EPC2 (ENSPMJG00000019996) #18 MBD5 (ENSPMJG00000019995) #19 ORC4 (ENSPMJG00000019994) #20 ACVR2A (ENSPMJG00000019993) #21 ZEB2 (ENSPMJG00000019972) #22 GTDC1 (ENSPMJG00000019971) #23 ARHGAP15 (ENSPMJG00000019970) #24 KYNU (ENSPMJG00000019969) #25 ENSPMJG00000019968 LRP1B (ENSPMJG00000019966) #26 ENSPMJG00000019964 ENSPMJG00000019963 NXPH2 (ENSPMJG00000019960) #27 SPOPL (ENSPMJG00000019959) #28 HNMT (ENSPMJG00000019956) #29 ENSPMJG00000019955 #29 THSD7B (ENSPMJG00000019954) #31 CXCR4 (ENSPMJG00000019953) #32 DARS1 (ENSPMJG00000019952) #33 MCM6 (ENSPMJG00000019951) #34 Neognathae_c ANCESTRAL SPECIES 9 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00960000189410 ENSGT00940000160835 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 Golden eagle MODERN SPECIES 22 NEB (ENSACCG00020008753) RIF1 (ENSACCG00020004834) #7 TNFAIP6 (ENSACCG00020004742) #8 NMI (ENSACCG00020004728) #9 RBM43 (ENSACCG00020004722) #10 RND3 (ENSACCG00020004714) #11 MMADHC (ENSACCG00020004705) #13 LYPD6 (ENSACCG00020004700) #14 LYPD6B (ENSACCG00020004692) #15 KIF5C (ENSACCG00020004682) #16 EPC2 (ENSACCG00020004673) #18 MBD5 (ENSACCG00020004667) #19 ORC4 (ENSACCG00020004654) #20 ACVR2A (ENSACCG00020004639) #21 ENSACCG00020004620 ZEB2 (ENSACCG00020004610) #22 GTDC1 (ENSACCG00020004583) #23 ARHGAP15 (ENSACCG00020004554) #24 KYNU (ENSACCG00020004543) #25 LRP1B (ENSACCG00020003781) #26 ENSACCG00020002322 ENSACCG00020002307 ENSACCG00020002285 NXPH2 (ENSACCG00020002266) #27 SPOPL (ENSACCG00020002242) #28 HNMT (ENSACCG00020002230) #29 ENSACCG00020002205 #29 THSD7B (ENSACCG00020002181) #31 CXCR4 (ENSACCG00020002142) #32 DARS1 (ENSACCG00020002123) #33 MCM6 (ENSACCG00020002049) #34 Kakapo MODERN SPECIES 22 ARL5A (ENSSHBG00005017513) NEB (ENSSHBG00005017527) RIF1 (ENSSHBG00005017612) #7 TNFAIP6 (ENSSHBG00005017775) #8 NMI (ENSSHBG00005017783) #9 RBM43 (ENSSHBG00005017793) #10 RND3 (ENSSHBG00005017805) #11 MMADHC (ENSSHBG00005017816) #13 LYPD6 (ENSSHBG00005017825) #14 LYPD6B (ENSSHBG00005017884) #15 KIF5C (ENSSHBG00005017894) #16 EPC2 (ENSSHBG00005017902) #18 MBD5 (ENSSHBG00005017919) #19 ORC4 (ENSSHBG00005017938) #20 ACVR2A (ENSSHBG00005017945) #21 ZEB2 (ENSSHBG00005017953) #22 GTDC1 (ENSSHBG00005017963) #23 ARHGAP15 (ENSSHBG00005017968) #24 KYNU (ENSSHBG00005017982) #25 LRP1B (ENSSHBG00005018190) #26 ENSSHBG00005019612 ENSSHBG00005019617 ENSSHBG00005019621 NXPH2 (ENSSHBG00005019625) #27 SPOPL (ENSSHBG00005019629) #28 ENSSHBG00005019633 #29 ENSSHBG00005019634 #29 ENSSHBG00005019637 #29 THSD7B (ENSSHBG00005019648) #31 ENSSHBG00005019669 CXCR4 (ENSSHBG00005019670) #32 Galloanserae ANCESTRAL SPECIES 7 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Anatidae ANCESTRAL SPECIES 37 ENSGT00940000154533.b.d.s ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000170936 Duck MODERN SPECIES 25 ENSAPLG00000007227 ENSAPLG00000029124 ENSAPLG00000021162 RIF1 (ENSAPLG00000007092) #7 TNFAIP6 (ENSAPLG00000006901) #8 ENSAPLG00000006787 #10 RND3 (ENSAPLG00000006777) #11 MMADHC (ENSAPLG00000006746) #13 LYPD6 (ENSAPLG00000006742) #14 LYPD6B (ENSAPLG00000006734) #15 KIF5C (ENSAPLG00000005832) #16 EPC2 (ENSAPLG00000010318) #18 MBD5 (ENSAPLG00000010489) #19 ORC4 (ENSAPLG00000010668) #20 ACVR2A (ENSAPLG00000011198) #21 ZEB2 (ENSAPLG00000007687) #22 GTDC1 (ENSAPLG00000007900) #23 ARHGAP15 (ENSAPLG00000008021) #24 KYNU (ENSAPLG00000008142) #25 LRP1B (ENSAPLG00000023161) #26 ENSAPLG00000018223 ENSAPLG00000025771 ENSAPLG00000008881 ENSAPLG00000027181 NXPH2 (ENSAPLG00000001877) #27 SPOPL (ENSAPLG00000008966) #28 HNMT (ENSAPLG00000022720) #29 MAP3K2 (ENSAPLG00000012930) PECR (ENSAPLG00000012862) TMEM169 (ENSAPLG00000012858) XRCC5 (ENSAPLG00000012767) Pink-footed goose MODERN SPECIES 25 ENSABRG00000010176 RIF1 (ENSABRG00000010041) #7 TNFAIP6 (ENSABRG00000010014) #8 ENSABRG00000010005 #9 RBM43 (ENSABRG00000010000) #10 RND3 (ENSABRG00000009986) #11 MMADHC (ENSABRG00000009981) #13 LYPD6 (ENSABRG00000009936) #14 LYPD6B (ENSABRG00000009917) #15 KIF5C (ENSABRG00000008750) #16 EPC2 (ENSABRG00000008493) #18 MBD5 (ENSABRG00000008432) #19 ORC4 (ENSABRG00000008400) #20 ACVR2A (ENSABRG00000008383) #21 ENSABRG00000008258 ZEB2 (ENSABRG00000008234) #22 GTDC1 (ENSABRG00000008212) #23 ARHGAP15 (ENSABRG00000008179) #24 KYNU (ENSABRG00000008161) #25 LRP1B (ENSABRG00000007918) #26 ENSABRG00000007871 ENSABRG00000007865 ENSABRG00000007851 NXPH2 (ENSABRG00000007844) #27 SPOPL (ENSABRG00000007833) #28 HNMT (ENSABRG00000007808) #29 ENSABRG00000007790 #29 THSD7B (ENSABRG00000007388) #31 CXCR4 (ENSABRG00000007346) #32 DARS1 (ENSABRG00000006410) #33 MCM6 (ENSABRG00000006023) #34 Phasianidae DUPLICATION Phasianidae ANCESTRAL SPECIES 8 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a.k #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00900000141555 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 Japanese quail MODERN SPECIES 25 ARL5A (ENSCJPG00005020514) ENSCJPG00005020515 RIF1 (ENSCJPG00005020659) #7 TNFAIP6 (ENSCJPG00005020664) #8 NMI (ENSCJPG00005020666) #9 RBM43 (ENSCJPG00005020668) #10 RND3 (ENSCJPG00005020670) #11 MMADHC (ENSCJPG00005020675) #13 LYPD6 (ENSCJPG00005020681) #14 LYPD6B (ENSCJPG00005020687) #15 KIF5C (ENSCJPG00005020706) #16 EPC2 (ENSCJPG00005020765) #18 MBD5 (ENSCJPG00005020766) #19 ORC4 (ENSCJPG00005020767) #20 ACVR2A (ENSCJPG00005020768) #21 ZEB2 (ENSCJPG00005020782) #22 GTDC1 (ENSCJPG00005020785) #23 ARHGAP15 (ENSCJPG00005020786) #24 UPP2 (ENSCJPG00005020788) CCDC148 (ENSCJPG00005020789) PKP4 (ENSCJPG00005020790) ENSCJPG00005020791 TANC1 (ENSCJPG00005020796) WDSUB1 (ENSCJPG00005020808) BAZ2B (ENSCJPG00005020810) ENSCJPG00005020946 Phasianidae_b ANCESTRAL SPECIES 8 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00530000063686.a.a #9 ENSGT00530000063686.a.b #10 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a.k #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000160205 #36 Chicken MODERN SPECIES 36 ENSGALG00010010115 RIF1 (ENSGALG00010009850) #7 TNFAIP6 (ENSGALG00010009793) #8 NMI (ENSGALG00010009731) #9 RBM43 (ENSGALG00010009690) #10 ENSGALG00010009641 RND3 (ENSGALG00010009638) #11 MMADHC (ENSGALG00010009609) #13 LYPD6 (ENSGALG00010009591) #14 LYPD6B (ENSGALG00010009583) #15 KIF5C (ENSGALG00010009578) #16 EPC2 (ENSGALG00010009555) #18 MBD5 (ENSGALG00010009515) #19 ORC4 (ENSGALG00010009498) #20 ACVR2A (ENSGALG00010009474) #21 ZEB2 (ENSGALG00010009461) #22 GTDC1 (ENSGALG00010009435) #23 ARHGAP15 (ENSGALG00010009373) #24 KYNU (ENSGALG00010009338) #25 ENSGALG00010009269 #26 ENSGALG00010011353 #26 ENSGALG00010009257 ENSGALG00010009224 NXPH2 (ENSGALG00010009212) #27 SPOPL (ENSGALG00010009172) #28 HNMT (ENSGALG00010009147) #29 ENSGALG00010009112 #29 THSD7B (ENSGALG00010009106) #31 CXCR4 (ENSGALG00010009099) #32 DARS (ENSGALG00010009094) #33 MCM6 (ENSGALG00010019843) #34 Turkey MODERN SPECIES 27 ENSMGAG00000015970 #32 HNMT (ENSMGAG00000012535) #29 ENSMGAG00000019800 #29 ENSMGAG00000012549 #27 ENSMGAG00000012543 #28 ENSMGAG00000012558 ENSMGAG00000017911 ENSMGAG00000018144 ENSMGAG00000020828 #26 ENSMGAG00000022989 #26 ENSMGAG00000022357 ENSMGAG00000012615 #25 ENSMGAG00000020185 ENSMGAG00000012624 #23 ENSMGAG00000019606 #23 ENSMGAG00000012628 #22 ENSMGAG00000018373 #22 ENSMGAG00000012670 #20 ENSMGAG00000012656 #21 MBD5 (ENSMGAG00000012693) #19 ENSMGAG00000012689 #18 ENSMGAG00000012694 #16 LYPD6B (ENSMGAG00000012711) #15 ENSMGAG00000012714 #13 ENSMGAG00000012713 #14 RND3 (ENSMGAG00000019988) #11 ENSMGAG00000012721 #10 ENSMGAG00000012727 #8 ENSMGAG00000012732 #7 ENSMGAG00000017715 ENSMGAG00000022891 Phasianidae ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.l #22 Phasianidae_b ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.l #22 Turkey MODERN SPECIES 27 HNMT (ENSMGAG00000012535) #29 ENSMGAG00000019800 #29 ENSMGAG00000012549 #27 ENSMGAG00000012543 #28 ENSMGAG00000012558 ENSMGAG00000017911 ENSMGAG00000018144 ENSMGAG00000020828 #26 ENSMGAG00000022989 #26 ENSMGAG00000022357 ENSMGAG00000012615 #25 ENSMGAG00000020185 ENSMGAG00000012624 #23 ENSMGAG00000019606 #23 ENSMGAG00000012628 #22 ENSMGAG00000018373 #22 ENSMGAG00000012670 #20 ENSMGAG00000012656 #21 MBD5 (ENSMGAG00000012693) #19 ENSMGAG00000012689 #18 ENSMGAG00000012694 #16 LYPD6B (ENSMGAG00000012711) #15 ENSMGAG00000012714 #13 ENSMGAG00000012713 #14 RND3 (ENSMGAG00000019988) #11 ENSMGAG00000012721 #10 ENSMGAG00000012727 #8 ENSMGAG00000012732 #7 ENSMGAG00000017715 ENSMGAG00000022891 ENSMGAG00000019364 Anura ANCESTRAL SPECIES 7 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 #7 ENSGT00940000157201 #8 ENSGT00940000154311.a.b.o.a ENSGT00530000063686.a.a #9 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.b #26 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 ENSGT01050000244824.D.b #34 ENSGT00940000155324 #35 ENSGT00940000170936 ENSGT00940000172822 ENSGT00940000160205 #36 Frog MODERN SPECIES 9 ENSXETG00000042237 ENSXETG00000004526 ENSXETG00000031130 nmi (ENSXETG00000004525) #9 rnd3 (ENSXETG00000047421) #11 mmadhc (ENSXETG00000004524) #13 lypd6 (ENSXETG00000004522) #14 lypd6b (ENSXETG00000030529) #15 kif5c (ENSXETG00000004486) #16 epc2 (ENSXETG00000024611) #18 mbd5 (ENSXETG00000018214) #19 orc4 (ENSXETG00000021718) #20 acvr2a (ENSXETG00000021720) #21 ENSXETG00000048550 ENSXETG00000047564 zeb2 (ENSXETG00000000237) #22 gtdc1 (ENSXETG00000000254) #23 arhgap15 (ENSXETG00000037989) #24 kynu (ENSXETG00000032399) #25 ENSXETG00000039635 ENSXETG00000040881 LRP1B (ENSXETG00000035383) #26 ENSXETG00000043969 rbm38 (ENSXETG00000001304) #27 spopl (ENSXETG00000001305) #28 hnmt (ENSXETG00000014875) #29 thsd7b (ENSXETG00000014878) #31 cxcr4 (ENSXETG00000041940) #32 dars1 (ENSXETG00000025033) #33 mcm6 (ENSXETG00000014891) #34 ENSXETG00000034493 Leishan spiny toad MODERN SPECIES 10 ENSLLEG00000011911 ENSLLEG00000011678 #9 ENSLLEG00000011640 RND3 (ENSLLEG00000011580) #11 ENSLLEG00000011561 MMADHC (ENSLLEG00000011447) #13 LYPD6 (ENSLLEG00000011401) #14 LYPD6B (ENSLLEG00000011339) #15 KIF5C (ENSLLEG00000010575) #16 EPC2 (ENSLLEG00000010232) #18 MBD5 (ENSLLEG00000010115) #19 ORC4 (ENSLLEG00000009923) #20 ACVR2A (ENSLLEG00000009386) #21 ENSLLEG00000009324 ENSLLEG00000009305 ZEB2 (ENSLLEG00000009045) #22 GTDC1 (ENSLLEG00000008844) #23 ENSLLEG00000008819 ENSLLEG00000008799 ARHGAP15 (ENSLLEG00000008547) #24 KYNU (ENSLLEG00000008448) #25 ENSLLEG00000008412 ENSLLEG00000008392 ENSLLEG00000008363 LRP1B (ENSLLEG00000007429) #26 ENSLLEG00000007340 NXPH2 (ENSLLEG00000007302) #27 SPOPL (ENSLLEG00000007173) #28 ENSLLEG00000007135 ENSLLEG00000006745 #29 ENSLLEG00000006667 Coelacanth MODERN SPECIES 1326 ZEB2 (ENSLACG00000009946) #22 Actinopterygii ANCESTRAL SPECIES ENSGT00390000006705 ENSGT00940000158559 ENSGT00940000156095 #37 ENSGT00940000160205 #36 ENSGT00940000165390 ENSGT00530000063686.a.a #9 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.a.a ##26 ENSGT00940000181625 ENSGT00940000157521.b #26 ENSGT00940000167103 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862 #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 Reedfish MODERN SPECIES 16 R3HDM1 (ENSECRG00000010368) #37 UBXN4 (ENSECRG00000010348) #36 ENSECRG00000010333 NMI (ENSECRG00000010319) #9 rnd3b (ENSECRG00000010309) #11 ENSECRG00000010302 mmadhca (ENSECRG00000010291) #13 lypd6 (ENSECRG00000010280) #14 lypd6b (ENSECRG00000010269) #15 KIF5C (ENSECRG00000010243) #16 epc2 (ENSECRG00000010226) #18 MBD5 (ENSECRG00000010210) #19 orc4 (ENSECRG00000010192) #20 acvr2aa (ENSECRG00000010157) #21 ENSECRG00000010123 zeb2b (ENSECRG00000010088) #22 gtdc1 (ENSECRG00000010049) #23 ENSECRG00000010038 arhgap15 (ENSECRG00000010022) #24 KYNU (ENSECRG00000009999) #25 ENSECRG00000009992 ENSECRG00000009987 ENSECRG00000009984 LRP1B (ENSECRG00000009175) #26 ENSECRG00000008792 ENSECRG00000008780 NXPH2 (ENSECRG00000008777) #27 spopla (ENSECRG00000008694) #28 hnmt (ENSECRG00000008654) #29 THSD7B (ENSECRG00000008604) #31 cxcr4a (ENSECRG00000008578) #32 Neopterygii ANCESTRAL SPECIES 1 ENSGT00940000158559 ENSGT00940000156095 #37 ENSGT00940000160205 #36 ENSGT00940000165390 ENSGT00530000063686.a.a #9 ENSGT01100000263596 ENSGT00940000157541 #11 ENSGT00390000015050 #13 ENSGT00390000000220.B #14 ENSGT00390000000220.A #15 ENSGT00940000158539 #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.a.a ##26 ENSGT00940000157521.b #26 ENSGT00940000167103 ENSGT00940000166136 ENSGT00950000182883.b.a.a #27 ENSGT00940000155953 #28 ENSGT00390000002862.ub #29 ENSGT00390000002862.tb #29 ENSGT00940000159262 #31 ENSGT01050000244848.C.a #32 ENSGT01030000234618.F #33 Osteoglossocephalai ANCESTRAL SPECIES 18 ENSGT00940000157541.f #11 ENSGT01100000263596 ENSGT00940000157541.e #11 ENSGT00390000015050.`b.a #13 ENSGT00390000000220.B.c.a #14 ENSGT00940000158539.b #16 ENSGT00390000015050.`b.b #13 ENSGT00390000000220.B.d #14 ENSGT00390000000220.B.c.b #14 ENSGT00390000000220.A #15 ENSGT00940000158539.a #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.a.a ##26 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b ENSGT00950000183114.a.b.b ENSGT00940000160639.b.b ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000160532.g ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b Clupeocephala ANCESTRAL SPECIES 110 ENSGT01100000263596 ENSGT00940000157541.e #11 ENSGT00390000015050.`b.b #13 ENSGT00390000000220.B.d #14 ENSGT00940000158539.b #16 ENSGT00390000000220.B.c.a #14 ENSGT00940000157541.f #11 ENSGT00390000015050.`b.a #13 ENSGT00390000000220.B.c.b #14 ENSGT00390000000220.A #15 ENSGT00940000158539.a #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000157521.a.b ##26 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.b.a.b.b.a ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000160532.g ENSGT00940000154486.b.a.a.b.e.a.b ENSGT00940000154486.b.b.b ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a Otomorpha ANCESTRAL SPECIES 151 ENSGT01070000254828 ENSGT00940000154801.n ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000157521.a.b ##26 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.b.a.b.b.a ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000160532.g ENSGT00940000154486.b.a.a.b.e.a.b ENSGT00940000154486.b.b.b ENSGT00940000155311.B Clupeiformes ANCESTRAL SPECIES 46 ENSGT00940000158239.a.a.d ENSGT00940000159606 ENSGT00940000155861.C.e ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00940000163253.b.c.a.e ENSGT00500000044939 ENSGT00940000156180.e ENSGT00390000001225 ENSGT00390000005581.a ENSGT00940000167649 ENSGT00940000158526 #18 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000157521.a.b ##26 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.b.a.b.b.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000160532.g ENSGT00940000154486.b.a.a.b.e.a.b ENSGT00940000154486.b.b.b ENSGT00940000155311.B ENSGT00530000063599.B.g ENSGT00390000006330.a.a.b Atlantic herring MODERN SPECIES 13 ALS2 (ENSCHAG00000007884) MPP4 (ENSCHAG00000008043) tmem237b (ENSCHAG00000009153) zp2l2 (ENSCHAG00000009198) cyp20a1 (ENSCHAG00000009217) ENSCHAG00000009301 cnot9 (ENSCHAG00000011642) ftcd (ENSCHAG00000011671) ENSCHAG00000011727 mstna (ENSCHAG00000011741) ENSCHAG00000011749 ENSCHAG00000011763 ENSCHAG00000011781 #19 orc4 (ENSCHAG00000011816) #20 ACVR2A (ENSCHAG00000012241) #21 zeb2b (ENSCHAG00000012603) #22 KYNU (ENSCHAG00000012715) #25 ENSCHAG00000012946 ##26 ENSCHAG00000013076 ENSCHAG00000013112 ##26 ENSCHAG00000015514 ENSCHAG00000015535 ENSCHAG00000015680 bzw1a (ENSCHAG00000015687) aox5 (ENSCHAG00000015811) ENSCHAG00000017795 ARL4C (ENSCHAG00000019417) sh3bp4a (ENSCHAG00000019425) s100b (ENSCHAG00000019461) ENSCHAG00000019566 ahr1b (ENSCHAG00000022603) Denticle herring MODERN SPECIES 15 sumo1 (ENSDCDG00000002518) fzd7b (ENSDCDG00000002516) cdk15 (ENSDCDG00000002501) ALS2 (ENSDCDG00000002468) MPP4 (ENSDCDG00000002418) zp2l2 (ENSDCDG00000002409) tmem237b (ENSDCDG00000002406) cyp20a1 (ENSDCDG00000002398) ENSDCDG00000001319 cnot9 (ENSDCDG00000001090) ftcd (ENSDCDG00000001081) mstna (ENSDCDG00000001073) MBD5 (ENSDCDG00000001067) #19 orc4 (ENSDCDG00000001038) #20 ACVR2A (ENSDCDG00000000525) #21 zeb2b (ENSDCDG00000000270) #22 ENSDCDG00000000205 KYNU (ENSDCDG00000026942) #25 LRP1B (ENSDCDG00000026680) ##26 ENSDCDG00000026623 ENSDCDG00000026619 bzw1a (ENSDCDG00000026614) AOX1 (ENSDCDG00000026445) ENSDCDG00000026431 sh3bp4a (ENSDCDG00000026424) s100b (ENSDCDG00000026423) ENSDCDG00000025184 ENSDCDG00000025127 ENSDCDG00000025123 ahr2 (ENSDCDG00000025118) ahr1b (ENSDCDG00000024571) Otophysi ANCESTRAL SPECIES 8 ENSGT00390000000220.B.d #14 ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000155025.B.i ENSGT00940000157017.a.b.b ENSGT00940000156498.h ENSGT00940000155698.A ENSGT00940000157307.g.b ENSGT00940000164021.B.a ENSGT00940000165011.a ENSGT00940000160265.g ENSGT00390000017030.b.b ENSGT01050000244893.c.a.b.h ENSGT00870000136549 ENSGT00950000182935.B.b.c ENSGT00510000048276 ENSGT00390000008221.a Characiphysae ANCESTRAL SPECIES 18 ENSGT00940000161625.m ENSGT00390000014995 ENSGT00390000003896 ENSGT00530000063480.a ENSGT01050000244956.b.w.b ENSGT00940000163148.a.a ENSGT00940000163322.a.a.b ENSGT00940000163494.a.a.c.a.b ENSGT00950000183003.a.a.b.c.a ENSGT00940000155238.y.a ENSGT00390000000220.B.d #14 ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000155025.B.i.l ENSGT00940000155025.B.i.k ENSGT00940000157017.a.b.b ENSGT00940000155698.A ENSGT00940000158594.od ENSGT00940000157307.g.b ENSGT00940000164021.B.a ENSGT00940000165011.a ENSGT00940000160265.g ENSGT00390000017030.b.b ENSGT00390000002667 ENSGT01050000244893.c.a.b.h ENSGT00870000136549 ENSGT00950000182935.B.b.c Channel catfish MODERN SPECIES 3 ENSIPUG00000018211 ENSIPUG00000018199 ENSIPUG00000018196 ENSIPUG00000018185 gulp1b (ENSIPUG00000018114) nmnat1 (ENSIPUG00000018100) calcrl (ENSIPUG00000018077) zswim2 (ENSIPUG00000018064) fam171b (ENSIPUG00000018056) march7 (ENSIPUG00000018025) ENSIPUG00000017957 ENSIPUG00000017871 wdsub1 (ENSIPUG00000017850) BAZ2B (ENSIPUG00000017681) ENSIPUG00000017663 zeb2b (ENSIPUG00000017622) #22 ENSIPUG00000017602 ENSIPUG00000017596 Kynu (ENSIPUG00000017535) #25 ENSIPUG00000017528 gal1b (ENSIPUG00000017485) ENSIPUG00000017478 ADAP1 (ENSIPUG00000017448) ENSIPUG00000017427 grap2b (ENSIPUG00000017405) fam83fb (ENSIPUG00000017393) CYTH2 (ENSIPUG00000017336) ENSIPUG00000017329 CUTA (ENSIPUG00000017318) eif3d (ENSIPUG00000017267) ENSIPUG00000017252 Characiphysae_b ANCESTRAL SPECIES 46 ENSGT00940000161625.m ENSGT00390000014995 ENSGT00390000003896 ENSGT00530000063480.a ENSGT01050000244956.b.w.b ENSGT00940000163148.a.a ENSGT00940000163322.a.a.b ENSGT00940000163494.a.a.c.a.b ENSGT00950000183003.a.a.b.c.a ENSGT00940000155238.y.a ENSGT00390000000220.B.d #14 ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000155025.B.i.l ENSGT00940000155025.B.i.k ENSGT00940000157017.a.b.b ENSGT00940000155698.A ENSGT00940000158594.od ENSGT00940000157307.g.b ENSGT00940000164021.B.a ENSGT00940000165011.a ENSGT00940000160265.g ENSGT00390000017030.b.b ENSGT00390000002667 ENSGT01050000244893.c.a.b.h ENSGT00870000136549 ENSGT00950000182935.B.b.c Characoidei ANCESTRAL SPECIES 23 ENSGT00940000163322.b ENSGT00940000164501.b ENSGT00940000163148.a.a.c.b ENSGT00940000163148.a.b.a ENSGT00940000163148.a.a.d ENSGT00940000163148.a.a.c.a ENSGT00940000163322.a.a.b ENSGT00940000163494.a.a.c.a.b ENSGT00950000183003.a.a.b.c.a ENSGT00940000155238.y.a ENSGT00390000000220.B.d #14 ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000155025.B.i.l ENSGT00940000155025.B.i.k ENSGT00940000157017.a.b.b ENSGT00940000155698.A ENSGT00940000158594.od ENSGT00940000157307.g.b ENSGT00940000164021.B.a ENSGT00940000165011.a ENSGT00940000160265.g ENSGT00390000017030.b.b ENSGT00390000002667 ENSGT01050000244893.c.a.b.h ENSGT00870000136549 ENSGT00950000182935.B.b.c Red-bellied piranha MODERN SPECIES 81 ENSPNAG00000023232 crygm7 (ENSPNAG00000023361) ENSPNAG00000023381 ENSPNAG00000023465 ENSPNAG00000023484 ENSPNAG00000023504 ENSPNAG00000023511 ENSPNAG00000023516 sowahcb (ENSPNAG00000003772) SEPTIN10 (ENSPNAG00000023575) ENSPNAG00000005251 #14 KIF5C (ENSPNAG00000023684) #16 MBD5 (ENSPNAG00000023697) #19 orc4 (ENSPNAG00000023741) #20 ACVR2A (ENSPNAG00000023798) #21 zeb2b (ENSPNAG00000023882) #22 KYNU (ENSPNAG00000023936) #25 lgals2b (ENSPNAG00000023976) lgals2b (ENSPNAG00000023985) ENSPNAG00000023994 ADAP1 (ENSPNAG00000005589) ENSPNAG00000024090 ENSPNAG00000024100 ENSPNAG00000024140 grap2b (ENSPNAG00000024181) fam83fb (ENSPNAG00000024206) cyth4b (ENSPNAG00000024229) Mexicana tetra MODERN SPECIES 50 pop4 (ENSAMXG00000002899) PLEKHF1 (ENSAMXG00000024970) C19orf12 (ENSAMXG00000035732) C19orf12 (ENSAMXG00000037694) si:ch211-260e23.9 (ENSAMXG00000002904) zgc:162297 (ENSAMXG00000002912) ccne1 (ENSAMXG00000002929) nae1 (ENSAMXG00000002934) ENSAMXG00000042116 dync1li2 (ENSAMXG00000002954) cmtm4 (ENSAMXG00000002966) cmtm3 (ENSAMXG00000002968) CKLF (ENSAMXG00000036918) tk2 (ENSAMXG00000033168) ENSAMXG00000043784 zeb2b (ENSAMXG00000008022) #22 ENSAMXG00000033676 ENSAMXG00000039075 Electric eel MODERN SPECIES 330 zeb2b (ENSEEEG00000024618) #22 AP3B1 (ENSEEEG00000024617) ENSEEEG00000024616 tbca (ENSEEEG00000024615) otpa (ENSEEEG00000024614) wdr41 (ENSEEEG00000024613) PDE8B (ENSEEEG00000024611) aggf1 (ENSEEEG00000024610) crhbp (ENSEEEG00000024609) s100z (ENSEEEG00000024607) ch25hl2 (ENSEEEG00000024606) Cyprinoidei ANCESTRAL SPECIES 103 ENSGT00940000162556.E.a.h.a ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000155025.B.i ENSGT00940000157017.a.b.b ENSGT00940000156498.h ENSGT00940000157307.g.b ENSGT00940000164021.B.a ENSGT00940000165011.a ENSGT00940000160265.g ENSGT00390000017030.b.b ENSGT01050000244893.c.a.b.h ENSGT00870000136549 ENSGT00990000210186 ENSGT00950000183184.b.b ENSGT00950000182935.B.b.c ENSGT00510000048276 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.m #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.m #22 Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 558 zeb2b (ENSSGRG00000043752) #22 ENSSGRG00000043750 #25 ENSSGRG00000043746 ENSSGRG00000043745 zgc:92360 (ENSSGRG00000043743) Golden-line barbel MODERN SPECIES 645 zeb2b (ENSSGRG00000044721) #22 lgals2b (ENSSGRG00000044713) zgc:92360 (ENSSGRG00000044712) ENSSGRG00000044703 grap2b (ENSSGRG00000044699) fam83fb (ENSSGRG00000044697) ENSSGRG00000044695 cacng2b (ENSSGRG00000044694) ENSSGRG00000044679 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.n.a #22 Cyprininae_a ANCESTRAL SPECIES 889 ENSGT00950000183208.A.c.a.n.a #22 ENSGT00390000008033.l #25 ENSGT00940000155025.B.i.m.a Common carp reference MODERN SPECIES 10 ENSCCRG00000078607 ENSCCRG00000024092 txnrd3 (ENSCCRG00000017758) ENSCCRG00000018844 zgc:158417 (ENSCCRG00000055994) ORC4 (ENSCCRG00000064660) #20 ENSCCRG00000069063 #21 ENSCCRG00000054956 ENSCCRG00000010987 ENSCCRG00000054977 ENSCCRG00000067830 ENSCCRG00000073094 ENSCCRG00000066772 ENSCCRG00000011928 ENSCCRG00000000215 zeb2b (ENSCCRG00000000445) #22 ENSCCRG00000057337 ENSCCRG00000064238 #25 zgc:92360 (ENSCCRG00000071459) lgals2b (ENSCCRG00000064629) ENSCCRG00000072249 ENSCCRG00000009380 ENSCCRG00000075754 grap2b (ENSCCRG00000064710) fam83fb (ENSCCRG00000059993) cyth4b (ENSCCRG00000071297) ENSCCRG00000071544 ENSCCRG00000055358 ENSCCRG00000073361 ENSCCRG00000001823 ENSCCRG00000075800 Goldfish MODERN SPECIES 46 ENSCARG00000026328 ENSCARG00000026425 tpra1 (ENSCARG00000026440) chchd6b (ENSCARG00000026746) PLXNA1 (ENSCARG00000026874) txnrd3 (ENSCARG00000028520) ENSCARG00000028753 orc4 (ENSCARG00000028779) #20 ENSCARG00000028913 #21 ube3a (ENSCARG00000029227) ENSCARG00000029788 ENSCARG00000029798 ENSCARG00000029816 ENSCARG00000029825 ENSCARG00000029840 zeb2b (ENSCARG00000029862) #22 lgals2b (ENSCARG00000030117) ENSCARG00000030143 zgc:92360 (ENSCARG00000030164) ENSCARG00000030409 ENSCARG00000031314 ENSCARG00000031365 ENSCARG00000031488 ENSCARG00000031504 ENSCARG00000031509 grap2b (ENSCARG00000031512) fam83fb (ENSCARG00000031522) cyth4b (ENSCARG00000031531) ENSCARG00000031540 ENSCARG00000031547 cacng2b (ENSCARG00000031562) Cyprininae ANCESTRAL SPECIES 526 ENSGT00950000183208.A.c.a.n.b #22 ENSGT00390000008033 #25 ENSGT00940000155025.B.i.m.b ENSGT00940000156498.h.a.b ENSGT00940000158594.kd.b ENSGT00940000155025.B.i.m.a ENSGT00940000157017.a.b.b ENSGT00940000156498.h.a.a ENSGT00940000158594.kd.a ENSGT00940000157307.g.b ENSGT00940000164021.B.a.a.a ENSGT00940000165011.a.b ENSGT00940000164021.B.a.a.b ENSGT00940000165011.a.a ENSGT00940000160265.g ENSGT00390000017030.b.b Cyprininae_a ANCESTRAL SPECIES 544 ENSGT00950000183208.A.c.a.n.b #22 ENSGT00390000008033.k #25 ENSGT00940000155025.B.i.m.b ENSGT00940000156498.h.a.b ENSGT00940000158594.kd.b ENSGT00940000164021.B.a.a.b ENSGT00940000165011.a.a ENSGT00940000160265.g ENSGT00390000017030.b.b ENSGT01050000244893.c.a.b.h.b.a ENSGT00870000136549 ENSGT00510000048276 ENSGT00390000008221.a.b Common carp reference MODERN SPECIES 16 ENSCCRG00000022809 tpra1 (ENSCCRG00000026158) ENSCCRG00000041984 ENSCCRG00000051875 ENSCCRG00000077951 ENSCCRG00000062474 ENSCCRG00000022925 txnrd3 (ENSCCRG00000070776) zgc:158417 (ENSCCRG00000017741) ORC4 (ENSCCRG00000016857) #20 ENSCCRG00000062267 #21 ENSCCRG00000070168 ENSCCRG00000061762 ENSCCRG00000075175 ENSCCRG00000074611 zeb2b (ENSCCRG00000019659) #22 ENSCCRG00000028800 #25 lgals2b (ENSCCRG00000048643) zgc:92360 (ENSCCRG00000048640) ENSCCRG00000026634 fam83fb (ENSCCRG00000069866) cyth4b (ENSCCRG00000005850) ENSCCRG00000023775 ENSCCRG00000041272 ENSCCRG00000034847 ENSCCRG00000031227 ENSCCRG00000072481 ENSCCRG00000045152 ENSCCRG00000063366 ENSCCRG00000071368 pde6ha (ENSCCRG00000063430) Goldfish MODERN SPECIES 2566 ENSCARG00000042284 zeb2b (ENSCARG00000041910) #22 Zebrafish MODERN SPECIES 21 DLGAP4 (ENSDARG00000012823) ENSDARG00000112895 myl9b (ENSDARG00000008030) ENSDARG00000105182 zgc:113442 (ENSDARG00000101906) zgc:158417 (ENSDARG00000101671) orc4 (ENSDARG00000101161) #20 ENSDARG00000104700 #21 ENSDARG00000015563 ENSDARG00000079884 tpra1 (ENSDARG00000054930) chchd6b (ENSDARG00000045978) PLXNA1 (ENSDARG00000114823) ENSDARG00000114386 txnrd3 (ENSDARG00000100374) zeb2b (ENSDARG00000078416) #22 ENSDARG00000099546 #25 lgals2b (ENSDARG00000038153) ENSDARG00000096322 zgc:92360 (ENSDARG00000038151) ENSDARG00000096307 ENSDARG00000115741 grap2b (ENSDARG00000101169) fam83fb (ENSDARG00000104188) cyth4b (ENSDARG00000103984) ENSDARG00000103662 ENSDARG00000099309 pde6ha (ENSDARG00000102558) rbfox2 (ENSDARG00000052182) atf4a (ENSDARG00000111939) ENSDARG00000091124 Euteleosteomorpha ANCESTRAL SPECIES 140 ENSGT00940000153470.a.a.a.a ENSGT00390000001170.a.b ENSGT00940000155759.e.b ENSGT00940000168614 ENSGT00940000158559 ENSGT00940000156095.m.a #37 ENSGT01100000263596 ENSGT00940000157541.e #11 ENSGT00390000015050.`b.b #13 ENSGT00390000000220.B.d #14 ENSGT00390000000220.B.c.a #14 ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000157521.a.b ##26 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.b.a.b.b.a ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000160532.g ENSGT00940000154486.b.a.a.b.e.a.b ENSGT00940000154486.b.b.b ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a Protacanthopterygii ANCESTRAL SPECIES 27 ENSGT00950000183030.d ENSGT00940000157128 ENSGT00730000111163 ENSGT00940000155759.e.b ENSGT00940000168614 ENSGT00940000158559 ENSGT00940000156095.m.a #37 ENSGT01100000263596 ENSGT00940000157541.e #11 ENSGT00390000015050.`b.b #13 ENSGT00390000000220.B.c.a #14 ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000157521.a.b ##26 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.b.a.b.b.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000160532.g ENSGT00940000154486.b.a.a.b.e.a.b ENSGT00940000154486.b.b.b.a ENSGT00940000155311.B ENSGT00530000063599.B.m ENSGT00390000006330.a.a.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 110 ENSGT00940000159505.v.a ENSGT00940000157065.y.b ENSGT00990000205068.b ENSGT00940000157065.y.a.a ENSGT00390000013113.u ENSGT00940000153577.A ENSGT00510000046499.r.a ENSGT00730000110915.b.c.a ENSGT01050000244864.C.f.a ENSGT01050000244864.D.t ENSGT00940000157784.c.d ENSGT00940000156556.h.d ENSGT00520000055635.c.a.a.b.e.b ENSGT00390000003873.n.b ENSGT00940000157233.c.b #21 ENSGT00950000183208.A.c.a.o #22 ENSGT00390000008033.s.a #25 ENSGT00940000157521.a.b.b ##26 ENSGT00940000160835.e.a ENSGT00990000204278 ENSGT00940000156556.h.c ENSGT00520000055635.c.a.a.b.e.a ENSGT00390000003873.n.a ENSGT00940000157233.c.a #21 ENSGT00950000183208.A.c.a.p #22 ENSGT00390000008033.s.b #25 ENSGT00940000160835.e.b ENSGT00940000166136.c ENSGT00390000012561.b.pb.b.c.a.a ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b.d Salmoninae_a ANCESTRAL SPECIES 66 ENSGT00950000182836.b.b.b.a.l.a ENSGT00390000003874.a.b.b ENSGT00940000158589.b.b.d.a.b ENSGT00940000159505.v.b ENSGT00940000157065.z ENSGT00390000013113.v ENSGT00730000110915.b.c.b ENSGT01050000244864.C.f.b ENSGT01050000244864.D.t.a ENSGT00940000157784.c.d.f.a ENSGT00940000156556.h.d ENSGT00520000055635.c.a.a.b.e.b ENSGT00390000003873.n.b ENSGT00390000010372.o.a ENSGT00940000157233.c.b #21 ENSGT00950000183208.A.c.a.o #22 ENSGT00390000008033.s.a #25 ENSGT00940000157521.a.b.a ##26 ENSGT00940000167103.c ENSGT00940000166136.d ENSGT00390000012561.b.pb.b.d ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b.c.a.a ENSGT00940000166136.c ENSGT00940000167103.d ENSGT00940000157521.a.b.b ##26 ENSGT00390000008033.s.b #25 ENSGT00950000183208.A.c.a.p #22 ENSGT00940000157233.c.a #21 ENSGT00390000003873.n.a ENSGT00520000055635.c.a.a.b.e.a Salmo ANCESTRAL SPECIES 48 ENSGT00390000003874.a.b.b ENSGT00940000159505.v.b ENSGT00940000157065.y.a.b ENSGT00390000013113.v ENSGT00730000110915.b.c.b ENSGT01050000244864.C.f.b ENSGT01050000244864.D.t.a ENSGT00940000157784.c.d.e ENSGT00940000157784.c.d.f.a ENSGT00940000156556.h.d ENSGT00520000055635.c.a.a.a ENSGT00390000010372.o.a.b ENSGT00390000003873.n.b ENSGT00390000010372.o.a.a ENSGT00940000157233.c.b #21 ENSGT00950000183208.A.c.a.o #22 ENSGT00390000008033.s.b #25 ENSGT00940000157521.a.b.a ##26 ENSGT00940000167103.c ENSGT00940000166136.d ENSGT00390000012561.b.pb.b.d ENSGT00940000160639.b.a.b.b.a.a ENSGT00390000013151.a.a.a.c ENSGT00940000161997.a.i ENSGT00940000160532.g.g ENSGT00940000154486.b.a.a.b.e.a.b.f ENSGT00940000154486.b.b.b.a.a ENSGT00530000063599.B.m.b ENSGT00390000006330.a.a.b.d ENSGT00390000010463.a.b.c.a.e ENSGT01050000244905.A.a.m Atlantic salmon MODERN SPECIES 7 pknx1 (ENSSSAG00000009247) ENSSSAG00000009270 ENSSSAG00000009516 cryzl1 (ENSSSAG00000042514) bcl9 (ENSSSAG00000042658) gja5b (ENSSSAG00000042741) gja8b (ENSSSAG00000101148) fstl1a (ENSSSAG00000042764) lrrc58a (ENSSSAG00000042935) GSK3B (ENSSSAG00000095698) ENSSSAG00000089311 ENSSSAG00000007805 ENSSSAG00000111645 ENSSSAG00000119084 ENSSSAG00000044402 #21 ENSSSAG00000050763 #22 ENSSSAG00000118719 ENSSSAG00000050936 #25 ENSSSAG00000051656 ##26 ENSSSAG00000058438 ENSSSAG00000104403 bzw1a (ENSSSAG00000108291) aox5 (ENSSSAG00000058981) ENSSSAG00000087803 sh3bp4a (ENSSSAG00000069340) ENSSSAG00000069404 ahr2d (ENSSSAG00000071319) ahr1b (ENSSSAG00000071494) ENSSSAG00000071938 mfsd6a (ENSSSAG00000071941) nab1a (ENSSSAG00000087426) River trout MODERN SPECIES 36 ENSSTUG00000015335 ENSSTUG00000015341 ITSN1 (ENSSTUG00000015611) cryzl1 (ENSSTUG00000017394) bcl9 (ENSSTUG00000017500) gja5b (ENSSTUG00000017522) ENSSTUG00000017526 gja8b (ENSSTUG00000017529) fstl1a (ENSSTUG00000017559) lrrc58a (ENSSTUG00000017989) gsk3ba (ENSSTUG00000018010) ENSSTUG00000018115 TRAPPC10 (ENSSTUG00000018176) ENSSTUG00000019153 ENSSTUG00000019214 #21 zeb2b (ENSSTUG00000020219) #22 ENSSTUG00000020296 #25 ENSSTUG00000020404 ##26 ENSSTUG00000021533 ENSSTUG00000021539 ENSSTUG00000021621 bzw1a (ENSSTUG00000021656) aox5 (ENSSTUG00000023990) ARL4C (ENSSTUG00000050415) sh3bp4a (ENSSTUG00000050422) s100b (ENSSTUG00000050427) ENSSTUG00000050431 ahr2 (ENSSTUG00000050438) ENSSTUG00000050442 ahr1b (ENSSTUG00000050452) ENSSTUG00000050473 Oncorhynchus ANCESTRAL SPECIES 43 ENSGT00950000182836.b.b.b.a.l.a ENSGT00390000003874.a.b.b ENSGT00940000158589.b.b.d.a.b ENSGT00940000159505.v.b ENSGT00940000157065.z ENSGT00390000013113.v ENSGT00730000110915.b.c.b ENSGT01050000244864.C.f.b ENSGT01050000244864.D.t.a ENSGT00940000157784.c.d.f.a ENSGT00940000156556.h.d ENSGT00520000055635.c.a.a.b.e.b ENSGT00390000003873.n.b ENSGT00390000010372.o.a ENSGT00940000157233.c.b #21 ENSGT00950000183208.A.c.a.o #22 ENSGT00390000008033.s.a #25 ENSGT00940000157521.a.b.a ##26 ENSGT00940000167103.c ENSGT00940000166136.d ENSGT00390000012561.b.pb.b.d ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b.c.a.a ENSGT00940000166136.c ENSGT00940000167103.d ENSGT00940000157521.a.b.b ##26 ENSGT00390000008033.s.b #25 ENSGT00950000183208.A.c.a.p #22 ENSGT00940000157233.c.a #21 ENSGT00390000003873.n.a ENSGT01000000220200 Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00950000182836.b.b.b.a.l.a ENSGT00390000003874.a.b.b ENSGT00940000158589.b.b.d.a.b ENSGT00940000159505.v.b ENSGT00940000157065.z ENSGT00390000013113.v ENSGT00730000110915.b.c.b ENSGT01050000244864.C.f.b ENSGT01050000244864.D.t.a ENSGT00940000157784.c.d.f.b ENSGT00940000156556.h.d ENSGT00520000055635.c.a.a.b.e.b ENSGT00390000003873.n.b ENSGT00390000010372.o.a ENSGT00940000157233.c.b #21 ENSGT00950000183208.A.c.a.o #22 ENSGT00390000008033.s.a #25 ENSGT00940000157521.a.b.a ##26 ENSGT00940000167103.c ENSGT00940000166136.d ENSGT00390000012561.b.pb.b.d ENSGT00950000183114.a.b.b ENSGT00940000160639.b.a.b.b.a.a ENSGT00390000013151.a.a.a.c ENSGT00940000161997.a.i ENSGT00940000160532.g.g ENSGT00940000154486.b.a.a.b.e.a.b.f ENSGT00940000154486.b.b.b.a.a ENSGT00530000063599.B.m.b ENSGT00530000063599.B.m.a.b ENSGT00390000006330.a.a.b.d Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 31 pdxkb (ENSOTSG00005022300) ENSOTSG00005022305 ENSOTSG00005022306 ITSN1 (ENSOTSG00005022307) cryzl1 (ENSOTSG00005022413) bcl9 (ENSOTSG00005022419) gja5b (ENSOTSG00005022422) gja8b (ENSOTSG00005022423) fstl1a (ENSOTSG00005022427) lrrc58a (ENSOTSG00005022430) gsk3ba (ENSOTSG00005022442) TRAPPC10 (ENSOTSG00005023480) zgc:194242 (ENSOTSG00005023527) ENSOTSG00005023534 #21 ENSOTSG00005024671 zeb2b (ENSOTSG00005024672) #22 ENSOTSG00005024717 #25 ENSOTSG00005024722 ##26 ENSOTSG00005024732 ENSOTSG00005024733 ENSOTSG00005024735 bzw1a (ENSOTSG00005024737) aox5 (ENSOTSG00005024759) ARL4C (ENSOTSG00005027585) sh3bp4a (ENSOTSG00005027586) s100b (ENSOTSG00005027588) ENSOTSG00005027591 ahr2 (ENSOTSG00005027595) ahr1b (ENSOTSG00005027603) ENSOTSG00005027606 mfsd6a (ENSOTSG00005027610) Chinook salmon MODERN SPECIES 5 pdxkb (ENSOTSG00005044714) ENSOTSG00005044709 ENSOTSG00005044707 ENSOTSG00005044504 cryzl1 (ENSOTSG00005044501) bcl9 (ENSOTSG00005044498) gja5b (ENSOTSG00005044497) gja8b (ENSOTSG00005044496) fstl1a (ENSOTSG00005044471) lrrc58a (ENSOTSG00005044465) gsk3ba (ENSOTSG00005044041) TRAPPC10 (ENSOTSG00005044030) zgc:194242 (ENSOTSG00005044029) ENSOTSG00005043690 #21 ENSOTSG00005043687 zeb2b (ENSOTSG00005043615) #22 ENSOTSG00005043609 #25 ENSOTSG00005043605 ENSOTSG00005043591 ##26 ENSOTSG00005043573 ENSOTSG00005043572 bzw1a (ENSOTSG00005043571) aox5 (ENSOTSG00005042834) ARL4C (ENSOTSG00005042816) sh3bp4a (ENSOTSG00005042815) s100b (ENSOTSG00005042814) ENSOTSG00005042813 ahr2 (ENSOTSG00005042811) ENSOTSG00005042810 ahr1b (ENSOTSG00005042808) mfsd6a (ENSOTSG00005042807) Coho salmon MODERN SPECIES 7 agpat3 (ENSOKIG00005030992) pdxkb (ENSOKIG00005031043) PKNOX1 (ENSOKIG00005031285) ENSOKIG00005031299 ITSN1 (ENSOKIG00005031417) cryzl1 (ENSOKIG00005032013) bcl9 (ENSOKIG00005032136) gja5b (ENSOKIG00005032228) gja8b (ENSOKIG00005032234) fstl1a (ENSOKIG00005032248) lrrc58a (ENSOKIG00005032318) GSK3B (ENSOKIG00005032382) TRAPPC10 (ENSOKIG00005032949) ENSOKIG00005033373 ENSOKIG00005033422 #21 ZEB2 (ENSOKIG00005034051) #22 ENSOKIG00005034109 KYNU (ENSOKIG00005034121) #25 ENSOKIG00005034234 ##26 ENSOKIG00005035002 ENSOKIG00005035046 bzw1a (ENSOKIG00005035073) aox5 (ENSOKIG00005037375) ENSOKIG00005050768 S100B (ENSOKIG00005050770) ARL4C (ENSOKIG00005050771) sh3bp4a (ENSOKIG00005050774) ENSOKIG00005050777 ahr2 (ENSOKIG00005050781) ahr1b (ENSOKIG00005050793) mfsd6a (ENSOKIG00005050799) Rainbow trout MODERN SPECIES 9 agpat3 (ENSOMYG00000026986) ENSOMYG00000026885 ENSOMYG00000026780 ENSOMYG00000025910 cryzl1 (ENSOMYG00000025324) bcl9 (ENSOMYG00000025199) gja5b (ENSOMYG00000025151) gja8b (ENSOMYG00000025145) fstl1a (ENSOMYG00000068136) lrrc58a (ENSOMYG00000024988) GSK3B (ENSOMYG00000024692) ENSOMYG00000024550 ENSOMYG00000023464 ENSOMYG00000022909 #21 ENSOMYG00000049283 ENSOMYG00000022771 #22 ENSOMYG00000022709 #25 ENSOMYG00000059790 ENSOMYG00000066520 ENSOMYG00000022553 ENSOMYG00000022532 bzw1a (ENSOMYG00000022459) aox5 (ENSOMYG00000021465) ENSOMYG00000020913 sh3bp4a (ENSOMYG00000020902) s100b (ENSOMYG00000020886) ENSOMYG00000020864 ahr2 (ENSOMYG00000020725) ENSOMYG00000020677 ahr1b (ENSOMYG00000020656) mfsd6a (ENSOMYG00000020644) Huchen MODERN SPECIES 1398 zeb2b (ENSHHUG00000043170) #22 KYNU (ENSHHUG00000043161) #25 Salmoninae ANCESTRAL SPECIES 110 ENSGT01050000244864.D.t ENSGT00940000157784.c.d ENSGT00940000156556.h.d ENSGT00520000055635.c.a.a.b.e.b ENSGT00390000003873.n.b ENSGT00940000157233.c.b #21 ENSGT00950000183208.A.c.a.o #22 ENSGT00390000008033.s.a #25 ENSGT00940000157521.a.b.b ##26 ENSGT00940000160835.e.a ENSGT00990000204278 ENSGT00940000156556.h.c ENSGT00520000055635.c.a.a.b.e.a ENSGT00390000003873.n.a ENSGT00940000157233.c.a #21 ENSGT00950000183208.A.c.a.p #22 ENSGT00390000008033.s.b #25 ENSGT00940000160835.e.b ENSGT00940000166136.c ENSGT00390000012561.b.pb.b.c.a.a ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b.d ENSGT00940000166136.d ENSGT00940000167103 ENSGT00940000157521.a.b.a ##26 ENSGT00940000160639.b.a.b.b.a.b ENSGT00390000013151.a.a.a.d ENSGT00940000161997.a.j ENSGT00940000160532.g.h ENSGT00940000160532.h.d.b ENSGT00530000065251.m.a Salmoninae_a ANCESTRAL SPECIES 66 ENSGT00940000159505.v.a ENSGT00990000205068.b ENSGT00940000157065.y.a.a ENSGT00940000157065.y.b ENSGT00390000013113.u ENSGT00940000153577.A ENSGT00510000046499.r.a ENSGT00730000110915.b.c.a ENSGT01050000244864.C.f.a ENSGT01050000244864.D.t.b ENSGT00940000157784.c.d.f.b ENSGT00940000156556.h.c ENSGT00520000055635.c.a.a.b.e.a ENSGT00390000003873.n.a ENSGT00940000157233.c.a #21 ENSGT00950000183208.A.c.a.p #22 ENSGT00390000008033.s.b #25 ENSGT00940000157521.a.b.b ##26 ENSGT00940000167103.d ENSGT00940000166136.c ENSGT00390000012561.b.pb.b.c.a.a ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b.d ENSGT00940000166136.d ENSGT00940000167103.c ENSGT00940000157521.a.b.a ##26 ENSGT00390000008033.s.a #25 ENSGT00950000183208.A.c.a.o #22 ENSGT00940000157233.c.b #21 ENSGT00390000010372.o.a ENSGT00390000003873.n.b Salmo ANCESTRAL SPECIES 41 ENSGT00940000159505.v.a ENSGT00990000205068.b ENSGT00940000157065.y.a.a ENSGT00390000013113.u ENSGT00940000153577.A ENSGT00510000046499.r.a ENSGT00730000110915.b.c.a ENSGT01050000244864.C.f.a ENSGT01050000244864.D.t.b ENSGT00940000157784.c.d.f.b ENSGT00940000156556.h.c ENSGT00520000055635.c.a.a.b.e.a ENSGT00390000010372.o.b.a ENSGT00390000003873.n.a ENSGT00940000157233.c.a #21 ENSGT00950000183208.A.c.a.p #22 ENSGT00390000008033.s.a #25 ENSGT00940000157521.a.b.b ##26 ENSGT00940000167103.d ENSGT00940000166136.c ENSGT00390000012561.b.pb.b.c.b ENSGT00950000183114.a.b.b ENSGT00940000160639.b.a.b.b.a.b ENSGT00390000013151.a.a.a.d ENSGT00940000161997.a.j ENSGT00940000160532.g.h ENSGT00940000154486.b.a.a.b.e.a.b.e ENSGT00940000169027.c.a ENSGT00940000153773.a.b ENSGT00940000154486.b.b.b.a.b ENSGT00940000155311.B Atlantic salmon MODERN SPECIES 8 bcl9 (ENSSSAG00000007293) gja5b (ENSSSAG00000120725) gja8b (ENSSSAG00000007356) fstl1a (ENSSSAG00000007369) LRC58 (ENSSSAG00000007504) GSK3B (ENSSSAG00000082990) ENSSSAG00000113930 ENSSSAG00000084610 ENSSSAG00000082370 ENSSSAG00000119875 ENSSSAG00000101072 ENSSSAG00000109868 ENSSSAG00000083284 ENSSSAG00000044053 ENSSSAG00000007982 #21 ENSSSAG00000015043 #22 ENSSSAG00000016689 #25 ENSSSAG00000023548 ##26 ENSSSAG00000039284 ENSSSAG00000114401 bzw1a (ENSSSAG00000058485) ENSSSAG00000039600 ENSSSAG00000112062 sh3bp4a (ENSSSAG00000040750) S100B (ENSSSAG00000040846) ENSSSAG00000040976 ahr2g (ENSSSAG00000045517) ENSSSAG00000122068 ahr1b (ENSSSAG00000088295) ENSSSAG00000045960 ENSSSAG00000045973 River trout MODERN SPECIES 32 ENSSTUG00000040236 ITSN1 (ENSSTUG00000039403) cryzl1 (ENSSTUG00000039269) setd4 (ENSSTUG00000039243) cbr1 (ENSSTUG00000039226) bcl9 (ENSSTUG00000039167) gja5b (ENSSTUG00000039159) gja8b (ENSSTUG00000039157) fstl1a (ENSSTUG00000038946) lrrc58a (ENSSTUG00000038928) gsk3ba (ENSSTUG00000038559) ENSSTUG00000038537 TRAPPC10 (ENSSTUG00000038469) ENSSTUG00000037681 #21 ENSSTUG00000037652 zeb2b (ENSSTUG00000037599) #22 ENSSTUG00000037562 #25 ENSSTUG00000037512 ##26 ENSSTUG00000037507 bzw1a (ENSSTUG00000037155) ENSSTUG00000037114 ENSSTUG00000032807 ARL4C (ENSSTUG00000032669) sh3bp4a (ENSSTUG00000032651) s100b (ENSSTUG00000032637) ENSSTUG00000032602 ahr2 (ENSSTUG00000032386) ENSSTUG00000032363 ENSSTUG00000032334 ahr1b (ENSSTUG00000032193) ENSSTUG00000032145 Oncorhynchus ANCESTRAL SPECIES 43 ENSGT00940000159505.v.a ENSGT00940000157065.y.b ENSGT00390000013113.u ENSGT00940000153577.A ENSGT00510000046499.r.a ENSGT00730000110915.b.c.a ENSGT01050000244864.C.f.a ENSGT01050000244864.D.t.b ENSGT00940000157784.c.d.e ENSGT00940000157784.c.d.f.b ENSGT00940000156556.h.c ENSGT00520000055635.c.a.a.b.e.a ENSGT01000000220200 ENSGT00390000003873.n.a ENSGT00940000157233.c.a #21 ENSGT00950000183208.A.c.a.p #22 ENSGT00390000008033.s.b #25 ENSGT00940000157521.a.b.b ##26 ENSGT00940000167103.d ENSGT00940000166136.c ENSGT00390000012561.b.pb.b.c.a.a ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b.d ENSGT00940000166136.d ENSGT00940000167103.c ENSGT00940000157521.a.b.a ##26 ENSGT00390000008033.s.a #25 ENSGT00950000183208.A.c.a.o #22 ENSGT00940000157233.c.b #21 ENSGT00390000010372.o.a ENSGT00390000003873.n.b Oncorhynchus_a ANCESTRAL SPECIES 77 ENSGT00940000158589.b.b.d.a.a ENSGT00940000159505.v.a ENSGT00940000157065.y.b ENSGT00390000013113.u ENSGT00940000153577.A ENSGT00510000046499.r.a ENSGT00730000110915.b.c.a ENSGT01050000244864.C.f.a ENSGT01050000244864.D.t.b ENSGT00940000157784.c.d.e.a ENSGT00940000156556.h.c ENSGT00520000055635.c.a.a.b.e.a ENSGT01000000220200 ENSGT00390000003873.n.a ENSGT00940000157233.c.a #21 ENSGT00950000183208.A.c.a.p #22 ENSGT00390000008033.s.b #25 ENSGT00940000157521.a.b.b ##26 ENSGT00940000167103.d ENSGT00940000166136.c ENSGT00390000012561.b.pb.b.c.a.a ENSGT00940000160639.b.a.b.b.a.b ENSGT00390000013151.a.a.a.d ENSGT00940000161997.a.j ENSGT00940000160532.g.h ENSGT00940000154486.b.a.a.b.e.a.b.e Chinook salmon MODERN SPECIES 31 TMPRSS3 (ENSOTSG00005033433) PKNOX1 (ENSOTSG00005033432) ITSN1 (ENSOTSG00005033171) cryzl1 (ENSOTSG00005033160) setd4 (ENSOTSG00005033159) cbr1 (ENSOTSG00005033158) bcl9 (ENSOTSG00005033157) gja5b (ENSOTSG00005033155) gja8b (ENSOTSG00005033154) fstl1a (ENSOTSG00005033119) lrrc58a (ENSOTSG00005033118) gsk3ba (ENSOTSG00005029996) ENSOTSG00005029995 TRAPPC10 (ENSOTSG00005029982) ENSOTSG00005029964 #21 zeb2b (ENSOTSG00005029959) #22 ENSOTSG00005029951 #25 ENSOTSG00005029947 ##26 ENSOTSG00005029946 ENSOTSG00005029944 bzw1a (ENSOTSG00005029943) ENSOTSG00005024999 ARL4C (ENSOTSG00005024981) sh3bp4a (ENSOTSG00005024975) s100b (ENSOTSG00005024974) ENSOTSG00005024972 ahr2 (ENSOTSG00005024967) nlgn4xa (ENSOTSG00005024424) ENSOTSG00005024423 PRKX (ENSOTSG00005024421) MXRA5 (ENSOTSG00005024419) Coho salmon MODERN SPECIES 25 TMPRSS3 (ENSOKIG00005014428) PKNOX1 (ENSOKIG00005014399) ENSOKIG00005014388 ITSN1 (ENSOKIG00005013142) cryzl1 (ENSOKIG00005012963) setd4 (ENSOKIG00005012951) cbr1 (ENSOKIG00005012945) bcl9 (ENSOKIG00005012919) gja5b (ENSOKIG00005012914) gja8b (ENSOKIG00005012911) fstl1a (ENSOKIG00005012758) ENSOKIG00005012416 ENSOKIG00005012386 TRAPPC10 (ENSOKIG00005012193) ENSOKIG00005012096 #21 zeb2b (ENSOKIG00005012049) #22 ENSOKIG00005011993 #25 ENSOKIG00005011581 ##26 ENSOKIG00005011520 ENSOKIG00005011506 bzw1a (ENSOKIG00005011297) AOX1 (ENSOKIG00005005651) ENSOKIG00005005392 ARL4C (ENSOKIG00005005387) sh3bp4a (ENSOKIG00005005374) s100b (ENSOKIG00005005357) ENSOKIG00005005295 ENSOKIG00005005269 ahr2 (ENSOKIG00005005263) ENSOKIG00005005251 ENSOKIG00005049356 Rainbow trout MODERN SPECIES 28 cryzl1 (ENSOMYG00000003093) ENSOMYG00000063705 setd4 (ENSOMYG00000002969) cbr1 (ENSOMYG00000002963) ENSOMYG00000075174 bcl9 (ENSOMYG00000002910) gja5b (ENSOMYG00000002839) gja8b (ENSOMYG00000002837) fstl1a (ENSOMYG00000002771) lrrc58a (ENSOMYG00000002587) GSK3B (ENSOMYG00000002509) ENSOMYG00000051554 ENSOMYG00000057814 ENSOMYG00000002015 ENSOMYG00000001608 #21 ENSOMYG00000001557 #22 ENSOMYG00000001495 #25 ENSOMYG00000001416 ##26 ENSOMYG00000001309 ENSOMYG00000074904 ENSOMYG00000045751 bzw1a (ENSOMYG00000045735) ENSOMYG00000074775 ENSOMYG00000043426 ENSOMYG00000052594 ENSOMYG00000043038 sh3bp4a (ENSOMYG00000043018) ENSOMYG00000054897 s100b (ENSOMYG00000043015) ENSOMYG00000042998 ahr2 (ENSOMYG00000042973) Huchen MODERN SPECIES 1038 zeb2b (ENSHHUG00000043573) #22 KYNU (ENSHHUG00000043670) #25 ENSHHUG00000043696 ##26 Northern pike MODERN SPECIES 21 chst10 (ENSELUG00000013861) zc3h13 (ENSELUG00000013945) ccnt2b (ENSELUG00000014286) ZRANB3 (ENSELUG00000014333) ENSELUG00000014359 ENSELUG00000014373 R3HDM1 (ENSELUG00000014413) #37 RND3 (ENSELUG00000014441) #11 mmadhca (ENSELUG00000014508) #13 LYPD6 (ENSELUG00000026726) #14 KIF5C (ENSELUG00000014707) #16 MBD5 (ENSELUG00000014723) #19 orc4 (ENSELUG00000014828) #20 ACVR2A (ENSELUG00000014935) #21 ENSELUG00000030788 zeb2b (ENSELUG00000014998) #22 ENSELUG00000029431 KYNU (ENSELUG00000015091) #25 LRP1B (ENSELUG00000015279) ##26 ENSELUG00000015484 ENSELUG00000015531 bzw1a (ENSELUG00000015556) AOX1 (ENSELUG00000015666) ARL4C (ENSELUG00000015699) sh3bp4a (ENSELUG00000015726) s100b (ENSELUG00000015744) ENSELUG00000031760 RHCG (ENSELUG00000015813) ENSELUG00000015840 ahr2 (ENSELUG00000015884) ahr1b (ENSELUG00000015980) Acanthomorphata ANCESTRAL SPECIES 112 ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000158714.c ENSGT01100000263502.A.a.a.a.b.a.b ENSGT00940000157728.a.a ENSGT00390000007225 ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a ENSGT01050000244905.A.a Euacanthomorphacea ANCESTRAL SPECIES 26 ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000158714.c ENSGT01100000263502.A.a.a.a.b.a.b ENSGT00940000157728.a.a ENSGT00390000007225 ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a ENSGT01050000244905.A.a ENSGT00940000167649 Percomorphaceae ANCESTRAL SPECIES 22 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089.e.a ENSGT00940000165423.a.b ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a ENSGT01050000244905.A.a Percomorphaceae_B ANCESTRAL SPECIES 22 ENSGT00940000176171 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Percomorphaceae_C ANCESTRAL SPECIES 23 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b Eupercaria ANCESTRAL SPECIES 23 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b Tetraodontidae ANCESTRAL SPECIES 26 ENSGT00940000167649 ENSGT01050000244905.A.a ENSGT00390000010463.a.b.c.a ENSGT00390000006330.a.a.b ENSGT00530000063599.B ENSGT00940000155311.B ENSGT00940000154486.b.b.a.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000177277 ENSGT00390000013151.a.a.a ENSGT00940000160639.a ENSGT00940000155773.a ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT01030000235131 ENSGT00950000183028.a.a.a.g.b ENSGT00940000161625.m ENSGT00940000165423.a.b ENSGT00940000156089.e.a ENSGT00500000044939 ENSGT00390000005159.j ENSGT00940000156444.c ENSGT00940000155861.C.e Fugu MODERN SPECIES 20 glsa (ENSTRUG00000000086) nab1a (ENSTRUG00000000082) mfsd6a (ENSTRUG00000000080) ENSTRUG00000021239 ahr1b (ENSTRUG00000027973) ENSTRUG00000000070 ENSTRUG00000023591 sh3bp4a (ENSTRUG00000002780) ENSTRUG00000003183 ENSTRUG00000030551 MBD5 (ENSTRUG00000003915) #19 orc4 (ENSTRUG00000004031) #20 ACVR2A (ENSTRUG00000004589) #21 ENSTRUG00000020772 ENSTRUG00000030280 zeb2b (ENSTRUG00000005095) #22 KYNU (ENSTRUG00000005436) #25 ENSTRUG00000026999 ENSTRUG00000027028 ENSTRUG00000005875 PLCXD1 (ENSTRUG00000008571) bzw1a (ENSTRUG00000005902) AOX1 (ENSTRUG00000006144) ENSTRUG00000019616 ENSTRUG00000008468 ENSTRUG00000029019 abi2b (ENSTRUG00000009423) cyp20a1 (ENSTRUG00000009561) tmem237b (ENSTRUG00000009812) MPP4 (ENSTRUG00000009863) ALS2 (ENSTRUG00000009974) Tetraodon MODERN SPECIES 18 ENSTNIG00000000517 MAP3K2 (ENSTNIG00000017156) sumo1 (ENSTNIG00000017157) SHROOM2 (ENSTNIG00000017158) aatf (ENSTNIG00000017159) mstna (ENSTNIG00000017160) stat1a (ENSTNIG00000017161) glsa (ENSTNIG00000017162) nab1a (ENSTNIG00000017163) mfsd6a (ENSTNIG00000017164) ENSTNIG00000000189 ENSTNIG00000017165 ACVR2A (ENSTNIG00000017166) #21 hoxc10a (ENSTNIG00000015049) hoxc10a (ENSTNIG00000017167) zeb2b (ENSTNIG00000017169) #22 ENSTNIG00000017170 ENSTNIG00000017171 #25 ENSTNIG00000000092 ENSTNIG00000017172 ENSTNIG00000000131 bzw1a (ENSTNIG00000017173) AOX1 (ENSTNIG00000017174) fhl2b (ENSTNIG00000017175) ENSTNIG00000017176 ENSTNIG00000017177 abi2b (ENSTNIG00000005932) cyp20a1 (ENSTNIG00000000941) ENSTNIG00000017179 cyp20a1 (ENSTNIG00000017178) ENSTNIG00000000361 Eupecaria_A ANCESTRAL SPECIES 23 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b Ballan wrasse MODERN SPECIES 65 MPP4 (ENSLBEG00000005345) ALS2 (ENSLBEG00000005235) CHRNA2 (ENSLBEG00000005188) zgc:113142 (ENSLBEG00000005165) inpp4ab (ENSLBEG00000005082) ENSLBEG00000005042 ENSLBEG00000005023 ENSLBEG00000005006 ENSLBEG00000004915 KIF5C (ENSLBEG00000004832) #16 ENSLBEG00000004796 #19 MBD5 (ENSLBEG00000004755) #19 ACVR2A (ENSLBEG00000004722) #21 orc4 (ENSLBEG00000004692) #20 ENSLBEG00000004669 zeb2b (ENSLBEG00000004635) #22 ENSLBEG00000004585 Eupecaria_B ANCESTRAL SPECIES 23 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Eupecaria_C ANCESTRAL SPECIES 30 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 62 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b Large yellow croaker MODERN SPECIES 486 ALS2 (ENSLCRG00005016821) MPP4 (ENSLCRG00005016829) tmem237b (ENSLCRG00005016841) cyp20a1 (ENSLCRG00005016846) abi2b (ENSLCRG00005016857) ENSLCRG00005017103 ENSLCRG00005017108 zgc:112023 (ENSLCRG00005017112) ENSLCRG00005017113 si:dkey-276j7.1 (ENSLCRG00005017114) ENSLCRG00005017145 KIF5C (ENSLCRG00005019928) #16 MBD5 (ENSLCRG00005020022) #19 orc4 (ENSLCRG00005020026) #20 ACVR2A (ENSLCRG00005020035) #21 zeb2b (ENSLCRG00005020091) #22 ENSLCRG00005020092 KYNU (ENSLCRG00005020095) #25 ENSLCRG00005020117 bzw1a (ENSLCRG00005020120) ENSLCRG00005020126 AOX1 (ENSLCRG00005020138) ENSLCRG00005020635 ENSLCRG00005020643 pwp2h (ENSLCRG00005020649) eed (ENSLCRG00005020653) ATP7B (ENSLCRG00005020672) ENSLCRG00005021202 ENSLCRG00005021205 ENSLCRG00005021230 gpd2 (ENSLCRG00005021231) European seabass MODERN SPECIES 15 ALS2 (ENSDLAG00005003900) ENSDLAG00005004272 MPP4 (ENSDLAG00005004698) tmem237b (ENSDLAG00005004792) cyp20a1 (ENSDLAG00005004839) ENSDLAG00005005020 ENSDLAG00005005092 ENSDLAG00005005117 ENSDLAG00005005133 ENSDLAG00005005138 ENSDLAG00005005185 KIF5C (ENSDLAG00005028840) #16 MBD5 (ENSDLAG00005007803) #19 ORC4 (ENSDLAG00005007813) #20 ACVR2A (ENSDLAG00005034750) #21 ZEB2 (ENSDLAG00005008176) #22 ENSDLAG00005008220 ENSDLAG00005008233 #25 ENSDLAG00005028082 ENSDLAG00005008382 ENSDLAG00005034195 ENSDLAG00005009168 ENSDLAG00005025101 ENSDLAG00005025769 ENSDLAG00005025771 ENSDLAG00005025783 ENSDLAG00005025813 ENSDLAG00005025884 ENSDLAG00005025985 ENSDLAG00005025989 ENSDLAG00005025994 Gilthead seabream MODERN SPECIES 16 ENSSAUG00010008970 ENSSAUG00010009365 ENSSAUG00010009368 zgc:65895 (ENSSAUG00010009367) ENSSAUG00010009370 ENSSAUG00010009378 ENSSAUG00010009384 ENSSAUG00010009397 ENSSAUG00010009401 ENSSAUG00010009403 ENSSAUG00010009417 KIF5C (ENSSAUG00010012040) #16 MBD5 (ENSSAUG00010016533) #19 orc4 (ENSSAUG00010016547) #20 ACVR2A (ENSSAUG00010016790) #21 zeb2b (ENSSAUG00010017032) #22 ENSSAUG00010017040 ENSSAUG00010017043 ENSSAUG00010017046 ENSSAUG00010017049 ENSSAUG00010017058 ENSSAUG00010017068 arl4cb (ENSSAUG00010017069) sh3bp4a (ENSSAUG00010017071) s100b (ENSSAUG00010017074) ENSSAUG00010017077 ENSSAUG00010017085 ahr1b (ENSSAUG00010017109) ENSSAUG00010017118 mfsd6a (ENSSAUG00010017120) nab1a (ENSSAUG00010017125) Perciformes ANCESTRAL SPECIES 27 ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b Cottioidei ANCESTRAL SPECIES 48 ENSGT00940000155861.C.e ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00390000008033 #25 Stickleback MODERN SPECIES zeb2b (ENSGACG00000015660) #22 ENSGACG00000015659 ENSGACG00000015657 ENSGACG00000015656 bzw1a (ENSGACG00000015646) AOX1 (ENSGACG00000015642) KYNU (ENSGACG00000015629) #25 ENSGACG00000015628 s100b (ENSGACG00000015622) sh3bp4a (ENSGACG00000015619) ENSGACG00000015617 ahr1b (ENSGACG00000015615) mfsd6a (ENSGACG00000015610) nab1a (ENSGACG00000015609) glsa (ENSGACG00000015599) stat1a (ENSGACG00000015589) Lumpfish MODERN SPECIES 11 ENSCLMG00005011044 NXPE3 (ENSCLMG00005011043) ENSCLMG00005011041 NXPE3 (ENSCLMG00005011040) ENSCLMG00005011039 ENSCLMG00005011036 zgc:112023 (ENSCLMG00005011034) ENSCLMG00005011027 ENSCLMG00005011025 ENSCLMG00005011024 KIF5C (ENSCLMG00005011023) #16 MBD5 (ENSCLMG00005011019) #19 orc4 (ENSCLMG00005010871) #20 ACVR2A (ENSCLMG00005010757) #21 ENSCLMG00005010755 zeb2b (ENSCLMG00005010704) #22 ENSCLMG00005010702 ENSCLMG00005010699 bzw1a (ENSCLMG00005010696) ENSCLMG00005010684 AOX1 (ENSCLMG00005010586) KYNU (ENSCLMG00005010583) #25 ephx2 (ENSCLMG00005010466) plaat1l (ENSCLMG00005010459) ENSCLMG00005010457 ENSCLMG00005010456 dusp27 (ENSCLMG00005010417) ENSCLMG00005010415 cybb (ENSCLMG00005010347) dynlt3 (ENSCLMG00005010346) TDP2 (ENSCLMG00005010345) Perciformes_a ANCESTRAL SPECIES 29 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b Pike perch MODERN SPECIES 141 ENSSLUG00000025310 ENSSLUG00000025296 ENSSLUG00000025287 ENSSLUG00000025284 si:dkey-276j7.1 (ENSSLUG00000025280) ENSSLUG00000025219 KIF5C (ENSSLUG00000025159) #16 MBD5 (ENSSLUG00000025136) #19 orc4 (ENSSLUG00000025128) #20 ACVR2A (ENSSLUG00000025094) #21 zeb2b (ENSSLUG00000025080) #22 KYNU (ENSSLUG00000025070) #25 ENSSLUG00000025063 ENSSLUG00000025059 ENSSLUG00000025055 bzw1a (ENSSLUG00000025021) AOX1 (ENSSLUG00000010458) anos1a (ENSSLUG00000009499) STS (ENSSLUG00000009477) ENSSLUG00000009470 ENSSLUG00000009467 pudp (ENSSLUG00000009463) Channel bull blenny MODERN SPECIES 11 abi2b (ENSCGOG00000020352) ENSCGOG00000020468 ENSCGOG00000020469 zgc:112023 (ENSCGOG00000020471) FHL2 (ENSCGOG00000020473) ENSCGOG00000020475 ENSCGOG00000020514 KIF5C (ENSCGOG00000021510) #16 ENSCGOG00000021684 ENSCGOG00000021686 ENSCGOG00000021687 #19 MBD5 (ENSCGOG00000002636) #19 orc4 (ENSCGOG00000002670) #20 orc4 (ENSCGOG00000002776) #20 ACVR2A (ENSCGOG00000002801) #21 zeb2b (ENSCGOG00000002864) #22 KYNU (ENSCGOG00000003107) #25 ENSCGOG00000003128 bzw1a (ENSCGOG00000003166) ENSCGOG00000004010 AOX1 (ENSCGOG00000004031) ENSCGOG00000005824 ENSCGOG00000005840 sh3bp4a (ENSCGOG00000005842) s100b (ENSCGOG00000005909) ENSCGOG00000005915 ENSCGOG00000005921 ahr1b (ENSCGOG00000005961) ENSCGOG00000006210 mfsd6a (ENSCGOG00000006212) nab1a (ENSCGOG00000006217) Percomorphaceae_D ANCESTRAL SPECIES 23 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000160835.k ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b Anabantaria ANCESTRAL SPECIES 32 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Anabantoidei ANCESTRAL SPECIES 28 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000167649 ENSGT01050000244905.A.a ENSGT00390000010463.a.b.c.a ENSGT00390000006330.a.a.b ENSGT00530000063599.B ENSGT00940000155311.B Climbing perch MODERN SPECIES 11 tmem237b (ENSATEG00000013987) cyp20a1 (ENSATEG00000013941) abi2b (ENSATEG00000013899) ENSATEG00000026816 ENSATEG00000013793 ENSATEG00000013736 ENSATEG00000013651 ENSATEG00000013592 ENSATEG00000013576 ENSATEG00000013561 ENSATEG00000013509 KIF5C (ENSATEG00000013424) #16 MBD5 (ENSATEG00000013403) #19 ORC4 (ENSATEG00000013353) #20 ACVR2A (ENSATEG00000013308) #21 ZEB2 (ENSATEG00000013248) #22 ENSATEG00000013173 #25 ENSATEG00000029211 ENSATEG00000013105 bzw1a (ENSATEG00000013087) ENSATEG00000013045 ENSATEG00000013007 sh3bp4a (ENSATEG00000012985) s100b (ENSATEG00000012971) ENSATEG00000012959 mstna (ENSATEG00000012946) stat1a (ENSATEG00000012909) glsa (ENSATEG00000012895) nab1a (ENSATEG00000012852) ENSATEG00000029503 mfsd6a (ENSATEG00000012822) Siamese fighting fish MODERN SPECIES 10 dnpep (ENSBSLG00000002951) PTPRN (ENSBSLG00000003064) ENSBSLG00000003076 bin1b (ENSBSLG00000003108) ihhb (ENSBSLG00000003648) nhej1 (ENSBSLG00000003692) ENSBSLG00000003716 ENSBSLG00000003742 ENSBSLG00000003756 si:dkey-276j7.1 (ENSBSLG00000003778) ENSBSLG00000003858 KIF5C (ENSBSLG00000004215) #16 MBD5 (ENSBSLG00000004621) #19 orc4 (ENSBSLG00000004625) #20 ACVR2A (ENSBSLG00000004863) #21 zeb2b (ENSBSLG00000005505) #22 ENSBSLG00000005554 KYNU (ENSBSLG00000005626) #25 ENSBSLG00000005795 ENSBSLG00000005865 bzw1a (ENSBSLG00000005879) AOX1 (ENSBSLG00000006075) ENSBSLG00000010522 sh3bp4a (ENSBSLG00000010523) s100b (ENSBSLG00000010525) mstna (ENSBSLG00000010533) stat1a (ENSBSLG00000010548) glsa (ENSBSLG00000011120) nab1a (ENSBSLG00000011389) mfsd6a (ENSBSLG00000011394) ENSBSLG00000011399 Zig-zag eel MODERN SPECIES 11 ENSMAMG00000022393 ENSMAMG00000022391 ENSMAMG00000022394 abi2b (ENSMAMG00000022395) cyp20a1 (ENSMAMG00000022396) tmem237b (ENSMAMG00000022398) ENSMAMG00000022400 ALS2 (ENSMAMG00000022402) ENSMAMG00000022411 ENSMAMG00000022423 ENSMAMG00000022416 KIF5C (ENSMAMG00000022432) #16 MBD5 (ENSMAMG00000022463) #19 ORC4 (ENSMAMG00000022465) #20 ACVR2A (ENSMAMG00000022472) #21 ZEB2 (ENSMAMG00000022475) #22 ENSMAMG00000022477 ENSMAMG00000022479 ENSMAMG00000022484 bzw1a (ENSMAMG00000022490) ENSMAMG00000022504 ENSMAMG00000022508 ENSMAMG00000022510 #25 s100b (ENSMAMG00000022511) ENSMAMG00000022513 ENSMAMG00000022514 ahr1b (ENSMAMG00000022515) ENSMAMG00000022516 mfsd6a (ENSMAMG00000022518) nab1a (ENSMAMG00000022520) glsa (ENSMAMG00000022523) Carangaria ANCESTRAL SPECIES 23 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000160835.k ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b Carangaria_A ANCESTRAL SPECIES 38 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000160835.k ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Seriola ANCESTRAL SPECIES 47 ENSGT00940000155861.C.e ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000160835.k ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00530000063484.b.b.d.b ENSGT00940000154342.C ENSGT01030000234555.a.b.f.b ENSGT00390000016929 Greater amberjack MODERN SPECIES 7 cyp20a1 (ENSSDUG00000012751) ENSSDUG00000012774 abi2b (ENSSDUG00000012792) ENSSDUG00000012818 ENSSDUG00000012835 ENSSDUG00000012846 ENSSDUG00000012859 ENSSDUG00000012903 ENSSDUG00000012914 ENSSDUG00000012932 ENSSDUG00000012979 KIF5C (ENSSDUG00000013005) #16 MBD5 (ENSSDUG00000013099) #19 orc4 (ENSSDUG00000013148) #20 ACVR2A (ENSSDUG00000013241) #21 zeb2b (ENSSDUG00000013274) #22 KYNU (ENSSDUG00000013315) #25 ENSSDUG00000013341 ENSSDUG00000013357 ENSSDUG00000013396 bzw1a (ENSSDUG00000013408) aox5 (ENSSDUG00000013452) AOX1 (ENSSDUG00000013779) sh3bp4a (ENSSDUG00000015477) s100b (ENSSDUG00000015497) ENSSDUG00000015503 ahr1b (ENSSDUG00000015515) tmem47 (ENSSDUG00000015528) DMD (ENSSDUG00000015736) ENSSDUG00000018370 gtf3c3 (ENSSDUG00000018401) Yellowtail amberjack MODERN SPECIES 3147 ENSSLDG00000009607 ENSSLDG00000009626 ENSSLDG00000009703 ENSSLDG00000009979 abi2b (ENSSLDG00000010004) cyp20a1 (ENSSLDG00000010047) tmem237b (ENSSLDG00000010122) ENSSLDG00000010157 ALS2 (ENSSLDG00000010212) CHRNA2 (ENSSLDG00000010291) zgc:113142 (ENSSLDG00000010348) inpp4ab (ENSSLDG00000010371) MBD5 (ENSSLDG00000010440) #19 orc4 (ENSSLDG00000010515) #20 ACVR2A (ENSSLDG00000010622) #21 zeb2b (ENSSLDG00000010668) #22 KYNU (ENSSLDG00000010706) #25 ENSSLDG00000010753 ENSSLDG00000010788 bzw1a (ENSSLDG00000010836) AOX1 (ENSSLDG00000011123) ENSSLDG00000012103 ENSSLDG00000012138 sh3bp4a (ENSSLDG00000012152) s100b (ENSSLDG00000012175) ENSSLDG00000012183 ahr1b (ENSSLDG00000012205) tmem47 (ENSSLDG00000012245) ENSSLDG00000012286 dmd (ENSSLDG00000012633) ENSSLDG00000013385 Barramundi perch MODERN SPECIES 115 cyp20a1 (ENSLCAG00010012080) abi2b (ENSLCAG00010012124) ENSLCAG00010012155 ENSLCAG00010012176 ENSLCAG00010012182 ENSLCAG00010012187 zgc:112023 (ENSLCAG00010012190) ENSLCAG00010012199 si:dkey-276j7.1 (ENSLCAG00010012224) ENSLCAG00010012428 ENSLCAG00010013139 KIF5C (ENSLCAG00010013218) #16 MBD5 (ENSLCAG00010013634) #19 orc4 (ENSLCAG00010013653) #20 ACVR2A (ENSLCAG00010013704) #21 zeb2b (ENSLCAG00010013729) #22 ENSLCAG00010013734 ENSLCAG00010013749 glsa (ENSLCAG00010013844) nab1a (ENSLCAG00010013993) mfsd6a (ENSLCAG00010013995) ENSLCAG00010013996 ahr1b (ENSLCAG00010013999) ENSLCAG00010014006 s100b (ENSLCAG00010014012) sh3bp4a (ENSLCAG00010014015) ENSLCAG00010014017 AOX1 (ENSLCAG00010014794) bzw1a (ENSLCAG00010019339) ENSLCAG00010019359 ENSLCAG00010019360 Pleuronectoidei ANCESTRAL SPECIES 47 ENSGT00940000155861.C.e ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Turbot MODERN SPECIES ENSSMAG00000001269 ALS2 (ENSSMAG00000001294) ENSSMAG00000001424 tmem237b (ENSSMAG00000001881) cyp20a1 (ENSSMAG00000001937) abi2b (ENSSMAG00000001987) ENSSMAG00000033782 ENSSMAG00000002095 ENSSMAG00000002121 ENSSMAG00000024252 ENSSMAG00000002383 KIF5C (ENSSMAG00000002413) #16 MBD5 (ENSSMAG00000002494) #19 ORC4 (ENSSMAG00000002536) #20 ACVR2A (ENSSMAG00000002580) #21 ZEB2 (ENSSMAG00000002657) #22 ENSSMAG00000036749 ENSSMAG00000013344 #25 ENSSMAG00000013302 ENSSMAG00000013288 bzw1a (ENSSMAG00000013262) aox5 (ENSSMAG00000013142) ENSSMAG00000013102 ENSSMAG00000013072 sh3bp4a (ENSSMAG00000013057) s100b (ENSSMAG00000029219) ENSSMAG00000013034 ahr1b (ENSSMAG00000013002) ENSSMAG00000029041 mfsd6a (ENSSMAG00000012979) nab1a (ENSSMAG00000012947) Tongue sole MODERN SPECIES 5 MPP4 (ENSCSEG00000006563) tmem237b (ENSCSEG00000006585) cyp20a1 (ENSCSEG00000006600) abi2b (ENSCSEG00000006631) ENSCSEG00000006678 ENSCSEG00000006741 ENSCSEG00000006768 FHL2 (ENSCSEG00000006775) ENSCSEG00000006780 ENSCSEG00000006793 ENSCSEG00000006806 KIF5C (ENSCSEG00000006817) #16 MBD5 (ENSCSEG00000006850) #19 orc4 (ENSCSEG00000006874) #20 ACVR2A (ENSCSEG00000006914) #21 zeb2b (ENSCSEG00000006933) #22 ENSCSEG00000006940 ENSCSEG00000006960 ENSCSEG00000006979 ENSCSEG00000006987 ENSCSEG00000006993 HAPLN1 (ENSCSEG00000007007) ENSCSEG00000007035 zcchc9 (ENSCSEG00000007145) ENSCSEG00000007159 slc12a2 (ENSCSEG00000007172) GAL3ST3 (ENSCSEG00000007242) ENSCSEG00000007245 ENSCSEG00000007256 MAPKAP1 (ENSCSEG00000007263) ENSCSEG00000007320 Ovalentaria ANCESTRAL SPECIES 23 ENSGT00940000176171 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Ovalentaria_B ANCESTRAL SPECIES 22 ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00530000063599.B.i.a ENSGT00390000006330.a.a.b Pomacentridae ANCESTRAL SPECIES 187 ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263476.E.b.a.a.b.a.b.c.a ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00940000178558 ENSGT00940000177855 Pomacentridae_A ANCESTRAL SPECIES 139 ENSGT00940000156444.c ENSGT00940000155861.C.e ENSGT00940000158299.b ENSGT00940000164908 ENSGT00940000157360.c ENSGT00940000165423.a.b ENSGT00610000086518.b.a ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00940000178558 ENSGT00940000177855 Amphiprion ANCESTRAL SPECIES 166 ENSGT00940000155861.C.e ENSGT00940000158299.b ENSGT00940000164908 ENSGT00940000157360.c ENSGT00940000165423.a.b ENSGT00610000086518.b.a ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT01090000262788 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00940000178558 ENSGT00940000177855 Clown anemonefish MODERN SPECIES 3332 ENSAOCG00000009035 zeb2b (ENSAOCG00000009065) #22 ENSAOCG00000009078 Orange clownfish MODERN SPECIES 16 CHRNA2 (ENSAPEG00000019366) zgc:113142 (ENSAPEG00000019392) inpp4ab (ENSAPEG00000019412) ENSAPEG00000019552 ENSAPEG00000019608 ENSAPEG00000019745 ENSAPEG00000019789 ENSAPEG00000019836 si:dkey-276j7.1 (ENSAPEG00000020173) ENSAPEG00000020204 KIF5C (ENSAPEG00000020317) #16 ENSAPEG00000020851 MBD5 (ENSAPEG00000020872) #19 orc4 (ENSAPEG00000020943) #20 ACVR2A (ENSAPEG00000020976) #21 zeb2b (ENSAPEG00000021041) #22 ENSAPEG00000021071 ENSAPEG00000021092 caskb (ENSAPEG00000021118) abcc4 (ENSAPEG00000021170) caskb (ENSAPEG00000021331) GPR34 (ENSAPEG00000003013) cenpl (ENSAPEG00000003021) FUNDC1 (ENSAPEG00000003073) kdm6al (ENSAPEG00000003112) ENSAPEG00000003263 ADAMTS5 (ENSAPEG00000003387) ADAMTS1 (ENSAPEG00000003424) cyyr1 (ENSAPEG00000003448) APP (ENSAPEG00000003479) atp5pf (ENSAPEG00000003584) Spiny chromis MODERN SPECIES 60 MBD5 (ENSAPOG00000000708) #19 orc4 (ENSAPOG00000016434) #20 ACVR2A (ENSAPOG00000016358) #21 zeb2b (ENSAPOG00000016286) #22 ENSAPOG00000016223 ENSAPOG00000016219 ENSAPOG00000016205 ENSAPOG00000016196 sgms2b (ENSAPOG00000016147) ENSAPOG00000016137 ENSAPOG00000016132 ENSAPOG00000016125 ENSAPOG00000016099 ENSAPOG00000016085 ENSAPOG00000016073 cyp17a2 (ENSAPOG00000016068) ENSAPOG00000016013 prelid1b (ENSAPOG00000016006) ENSAPOG00000015973 Bicolor damselfish MODERN SPECIES 411 zeb2b (ENSSPAG00000016513) #22 ENSSPAG00000016552 ENSSPAG00000016568 Cichlidae ANCESTRAL SPECIES 27 ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.i.a ENSGT00390000006330.a.a.b Pseudocrenilabrinae ANCESTRAL SPECIES 10 ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089.e.a ENSGT00610000086518.b.a.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.i.a ENSGT00390000006330.a.a.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 16 ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089.e.a ENSGT00610000086518.b.a.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.i.a ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Haplochromini ANCESTRAL SPECIES 38 ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a.a.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b.q #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00940000177855 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.i.a ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Haplochromini_A ANCESTRAL SPECIES 42 ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a.a.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000154395.a.a.b.b.g.b.m.a ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b.q #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00940000177855 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.i.a ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a P. nyererei MODERN SPECIES 380 ENSPNYG00000022444 ENSPNYG00000022424 ENSPNYG00000022405 ENSPNYG00000022392 ENSPNYG00000022379 ENSPNYG00000022374 si:dkey-276j7.1 (ENSPNYG00000022362) ENSPNYG00000022347 KIF5C (ENSPNYG00000022326) #16 ENSPNYG00000022317 #19 orc4 (ENSPNYG00000022306) #20 ACVR2A (ENSPNYG00000022291) #21 ENSPNYG00000022254 ENSPNYG00000022247 ENSPNYG00000022234 zeb2b (ENSPNYG00000022218) #22 KYNU (ENSPNYG00000022184) #25 ENSPNYG00000022175 ENSPNYG00000022153 ENSPNYG00000022140 bzw1a (ENSPNYG00000022122) AOX1 (ENSPNYG00000021820) ENSPNYG00000021646 ENSPNYG00000021637 sh3bp4a (ENSPNYG00000021626) s100b (ENSPNYG00000021618) ENSPNYG00000021607 ENSPNYG00000021546 ENSPNYG00000021443 ENSPNYG00000021394 mfsd6a (ENSPNYG00000021356) Haplochromini_B ANCESTRAL SPECIES 48 ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a.a.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000154395.a.a.b.b.g.b.m.a ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b.q #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.i.a ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Zebra mbuna MODERN SPECIES 1105 mfsd6a (ENSMZEG00005015608) ENSMZEG00005015623 ahr1b (ENSMZEG00005015628) ENSMZEG00005015646 ENSMZEG00005015665 ENSMZEG00005015678 s100b (ENSMZEG00005015684) sh3bp4a (ENSMZEG00005015690) ENSMZEG00005015698 AOX1 (ENSMZEG00005015711) bzw1a (ENSMZEG00005015758) ENSMZEG00005015788 ENSMZEG00005015796 ENSMZEG00005015807 KYNU (ENSMZEG00005015818) #25 zeb2b (ENSMZEG00005015857) #22 ENSMZEG00005015865 ACVR2A (ENSMZEG00005015870) #21 orc4 (ENSMZEG00005015887) #20 MBD5 (ENSMZEG00005015907) #19 KIF5C (ENSMZEG00005015999) #16 ENSMZEG00005017356 si:dkey-276j7.1 (ENSMZEG00005017363) ENSMZEG00005017369 ENSMZEG00005017371 ENSMZEG00005017375 ENSMZEG00005017377 ENSMZEG00005017382 ENSMZEG00005017391 ENSMZEG00005017403 ENSMZEG00005017418 Eastern happy MODERN SPECIES 14 ENSACLG00000015448 ENSACLG00000015398 ENSACLG00000015120 ENSACLG00000015074 ENSACLG00000015053 ENSACLG00000015039 ENSACLG00000015007 si:dkey-276j7.1 (ENSACLG00000014993) ENSACLG00000014949 KIF5C (ENSACLG00000014904) #16 MBD5 (ENSACLG00000014821) #19 orc4 (ENSACLG00000014765) #20 ACVR2A (ENSACLG00000014722) #21 ENSACLG00000014633 ENSACLG00000014619 zeb2b (ENSACLG00000014590) #22 KYNU (ENSACLG00000014420) #25 ENSACLG00000014354 ENSACLG00000014340 bzw1a (ENSACLG00000014272) AOX1 (ENSACLG00000014214) ENSACLG00000014159 sh3bp4a (ENSACLG00000014087) s100b (ENSACLG00000014052) ENSACLG00000014025 ENSACLG00000013968 ahr1b (ENSACLG00000013927) ENSACLG00000013870 ENSACLG00000013861 mfsd6a (ENSACLG00000013804) nab1a (ENSACLG00000013744) Burton s mouthbrooder MODERN SPECIES 302 ENSHBUG00000008913 ENSHBUG00000000222 ENSHBUG00000008954 si:dkey-276j7.1 (ENSHBUG00000000225) ENSHBUG00000008986 KIF5C (ENSHBUG00000009110) #16 MBD5 (ENSHBUG00000009128) #19 orc4 (ENSHBUG00000009159) #20 ACVR2A (ENSHBUG00000009246) #21 ENSHBUG00000009275 zeb2b (ENSHBUG00000009312) #22 KYNU (ENSHBUG00000009358) #25 ENSHBUG00000009397 ENSHBUG00000009415 bzw1a (ENSHBUG00000009482) AOX1 (ENSHBUG00000009527) ENSHBUG00000009561 sh3bp4a (ENSHBUG00000009590) s100b (ENSHBUG00000009598) ENSHBUG00000009612 ENSHBUG00000000246 ENSHBUG00000000248 ENSHBUG00000009653 mfsd6a (ENSHBUG00000009699) nab1a (ENSHBUG00000009745) glsa (ENSHBUG00000009819) Lyretail cichlid MODERN SPECIES 315 ENSNBRG00000014302 ENSNBRG00000014333 ENSNBRG00000014498 ENSNBRG00000014506 ENSNBRG00000014521 ENSNBRG00000014531 ENSNBRG00000014545 ENSNBRG00000014556 ENSNBRG00000014599 ENSNBRG00000014767 KIF5C (ENSNBRG00000014799) #16 ENSNBRG00000014843 #19 MBD5 (ENSNBRG00000014857) #19 orc4 (ENSNBRG00000014881) #20 ACVR2A (ENSNBRG00000014918) #21 zeb2b (ENSNBRG00000014957) #22 ENSNBRG00000014980 KYNU (ENSNBRG00000014995) #25 ENSNBRG00000015042 ENSNBRG00000015054 ENSNBRG00000015091 bzw1a (ENSNBRG00000015102) AOX1 (ENSNBRG00000015139) ENSNBRG00000015182 sh3bp4a (ENSNBRG00000015226) s100b (ENSNBRG00000015237) ENSNBRG00000015244 ENSNBRG00000015256 ahr1b (ENSNBRG00000015283) ENSNBRG00000015423 mfsd6a (ENSNBRG00000015467) Nile tilapia MODERN SPECIES 14 ENSONIG00000012316 ENSONIG00000034786 ENSONIG00000012315 ENSONIG00000027291 ENSONIG00000031669 ENSONIG00000028870 ENSONIG00000012312 ENSONIG00000012311 ENSONIG00000014220 si:dkey-276j7.1 (ENSONIG00000043039) ENSONIG00000012299 KIF5C (ENSONIG00000012293) #16 orc4 (ENSONIG00000012282) #20 MBD5 (ENSONIG00000012287) #19 ACVR2A (ENSONIG00000012275) #21 zeb2b (ENSONIG00000012271) #22 ENSONIG00000027312 KYNU (ENSONIG00000012265) #25 ENSONIG00000041655 ENSONIG00000012262 ENSONIG00000034740 ENSONIG00000012261 bzw1a (ENSONIG00000042050) AOX1 (ENSONIG00000012222) ENSONIG00000027545 ENSONIG00000021039 sh3bp4a (ENSONIG00000012221) s100b (ENSONIG00000012218) ENSONIG00000039895 ENSONIG00000012216 ahr1b (ENSONIG00000041277) Midas cichlid MODERN SPECIES 371 ENSACIG00000010616 ENSACIG00000010655 ENSACIG00000010698 ENSACIG00000010716 ENSACIG00000010730 KIF5C (ENSACIG00000010772) #16 ENSACIG00000010821 #19 MBD5 (ENSACIG00000010834) #19 orc4 (ENSACIG00000010856) #20 ACVR2A (ENSACIG00000010889) #21 zeb2b (ENSACIG00000010911) #22 ENSACIG00000010941 Atherinomorphae ANCESTRAL SPECIES 24 ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Cyprinodontiformes ANCESTRAL SPECIES 26 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a ENSGT01050000244905.A.a Aplocheiloidei ANCESTRAL SPECIES 226 ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b Mangrove rivulus MODERN SPECIES 160 KIF5C (ENSKMAG00000004300) #16 MBD5 (ENSKMAG00000004289) #19 orc4 (ENSKMAG00000004218) #20 ACVR2A (ENSKMAG00000004157) #21 zeb2b (ENSKMAG00000004104) #22 KYNU (ENSKMAG00000004049) #25 ENSKMAG00000004037 ENSKMAG00000003990 ENSKMAG00000003975 bzw1a (ENSKMAG00000003931) Turquoise killifish MODERN SPECIES 1619 ache (ENSNFUG00015012736) znf16l (ENSNFUG00015012724) ENSNFUG00015012691 NR4A2 (ENSNFUG00015012524) gpd2 (ENSNFUG00015012357) ENSNFUG00015012335 ENSNFUG00015012237 eed (ENSNFUG00015012208) ENSNFUG00015012170 ENSNFUG00015011470 FAM171B (ENSNFUG00015011440) MBD5 (ENSNFUG00015011296) #19 ACVR2A (ENSNFUG00015011205) #21 ENSNFUG00015011167 ENSNFUG00015011163 zeb2b (ENSNFUG00015011080) #22 ENSNFUG00015011047 ENSNFUG00015011037 AOX1 (ENSNFUG00015008831) bzw1a (ENSNFUG00015008762) ENSNFUG00015008757 ENSNFUG00015008729 ENSNFUG00015008412 ENSNFUG00015008373 SH3BP4A (ENSNFUG00015008370) ARL4C (ENSNFUG00015008367) s100b (ENSNFUG00015008365) OLA.329 (ENSNFUG00015008356) ENSNFUG00015008347 mfsd6a (ENSNFUG00015008344) ENSNFUG00015008341 Cyprinodontoidei ANCESTRAL SPECIES 67 ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000168817 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a NAME_4 ANCESTRAL SPECIES 184 ENSGT00940000165423.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000168817 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Mummichog MODERN SPECIES 2437 zeb2b (ENSFHEG00000020874) #22 KYNU (ENSFHEG00000020917) #25 Sheepshead minnow MODERN SPECIES 175 ENSCVAG00000022558 ENSCVAG00000022584 ENSCVAG00000022586 ENSCVAG00000022593 ENSCVAG00000022605 KIF5C (ENSCVAG00000022674) #16 MBD5 (ENSCVAG00000022692) #19 orc4 (ENSCVAG00000022702) #20 ACVR2A (ENSCVAG00000022775) #21 ENSCVAG00000022787 zeb2b (ENSCVAG00000022820) #22 KYNU (ENSCVAG00000022823) #25 ENSCVAG00000022843 ENSCVAG00000022855 bzw1a (ENSCVAG00000022879) AOX1 (ENSCVAG00000023083) ENSCVAG00000023139 sh3bp4a (ENSCVAG00000023146) s100b (ENSCVAG00000023198) Poeciliinae ANCESTRAL SPECIES 23 ENSGT00940000155318.b.b ENSGT00390000010543.v ENSGT01030000234635.a.b.a.b.a ENSGT00610000086518.b.a.h.a ENSGT00610000086518.b.a.h.b ENSGT00940000165423.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000168817.l.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Poecilia DUPLICATION Poecilia ANCESTRAL SPECIES 30 ENSGT00390000010543.v ENSGT00940000155318.b.b ENSGT01030000234635.a.b.a.b.a ENSGT00610000086518.b.a.h.a ENSGT00610000086518.b.a.h.b ENSGT00940000165423.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT00940000155773.a ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a.q #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000168817.l.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a NAME_6 ANCESTRAL SPECIES 151 ENSGT00940000155992.c.a ENSGT00530000063273.b.a.a ENSGT00720000108822 ENSGT00940000153969.b ENSGT00940000165503 ENSGT00940000166532 ENSGT00940000157440.m.a ENSGT00940000155324.g.a.b.a.a #35 ENSGT00940000155324.g.a.b.a.b #35 ENSGT00940000155324.g.a.a #35 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT00950000183208.A.c.a.q #22 ENSGT00390000008033 #25 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000168817.l.a ENSGT00730000111912.A.b ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Sailfin molly MODERN SPECIES 2053 zeb2b (ENSPLAG00000012661) #22 Amazon molly MODERN SPECIES 479 MBD5 (ENSPFOG00000004180) #19 orc4 (ENSPFOG00000004221) #20 ACVR2A (ENSPFOG00000004465) #21 zeb2b (ENSPFOG00000004757) #22 KYNU (ENSPFOG00000004972) #25 ENSPFOG00000005403 ENSPFOG00000005929 bzw1a (ENSPFOG00000004908) AOX1 (ENSPFOG00000005969) sh3bp4a (ENSPFOG00000007010) s100b (ENSPFOG00000007041) Guppy MODERN SPECIES 264 zeb2b (ENSPREG00000004470) #22 Poecilia ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.r #22 NAME_6 ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.r #22 Sailfin molly MODERN SPECIES 2133 ENSPLAG00000019039 #22 Guppy MODERN SPECIES 450 ENSPREG00000022296 ENSPREG00000022286 ENSPREG00000022274 ENSPREG00000022228 ENSPREG00000022203 ENSPREG00000022176 ENSPREG00000022159 ENSPREG00000022150 ENSPREG00000022144 ENSPREG00000022137 ENSPREG00000022126 KIF5C (ENSPREG00000022100) #16 MBD5 (ENSPREG00000022088) #19 orc4 (ENSPREG00000022075) #20 ACVR2A (ENSPREG00000022059) #21 ENSPREG00000022031 #22 KYNU (ENSPREG00000022003) #25 ENSPREG00000021979 ENSPREG00000021966 bzw1a (ENSPREG00000021850) aox1 (ENSPREG00000021723) ENSPREG00000021699 sh3bp4a (ENSPREG00000021689) s100b (ENSPREG00000021673) ENSPREG00000021664 ENSPREG00000021575 ENSPREG00000021486 ahr1b (ENSPREG00000021437) ENSPREG00000021411 mfsd6a (ENSPREG00000021378) nab1a (ENSPREG00000021362) Platyfish MODERN SPECIES 16 ENSXMAG00000002142 ENSXMAG00000026901 ENSXMAG00000020912 ENSXMAG00000002166 si:dkey-276j7.1 (ENSXMAG00000029107) ENSXMAG00000002174 ENSXMAG00000029440 ENSXMAG00000005175 ENSXMAG00000029571 ENSXMAG00000025243 KIF5C (ENSXMAG00000010638) #16 kif5c (ENSXMAG00000027692) MBD5 (ENSXMAG00000010633) #19 orc4 (ENSXMAG00000010615) #20 ACVR2A (ENSXMAG00000010594) #21 zeb2b (ENSXMAG00000010581) #22 ENSXMAG00000021934 KYNU (ENSXMAG00000010565) #25 ENSXMAG00000010550 ENSXMAG00000029902 bzw1a (ENSXMAG00000026117) aox1 (ENSXMAG00000010446) ENSXMAG00000000086 sh3bp4a (ENSXMAG00000010440) s100b (ENSXMAG00000010438) ENSXMAG00000027895 ENSXMAG00000026509 ahr1b (ENSXMAG00000010418) ENSXMAG00000010417 mfsd6a (ENSXMAG00000010414) ENSXMAG00000024985 Oryzias ANCESTRAL SPECIES 40 ENSGT00940000154486.b.b.a.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000177277 ENSGT00940000161997.a ENSGT00390000013151.a.a.a ENSGT00940000160639.a ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b ENSGT00940000166136 ENSGT00940000167103 ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT01040000240400.c.a.b.b ENSGT00950000183208.A.c.a #22 ENSGT00950000183184.a.a.b ENSGT00390000006826 ENSGT00940000165235.a.a ENSGT00940000155675.p.b ENSGT00950000183140.a.a ENSGT00550000074981 ENSGT00510000047334 ENSGT00940000155749.d ENSGT00940000154360.A.b.b ENSGT00940000162768.B.b ENSGT00390000004923.C ENSGT00390000001718.b ENSGT00950000183038.a.b.b.b.r ENSGT00950000183165.a.a.a ENSGT00940000154657.A.d Oryzias_b ANCESTRAL SPECIES 50 ENSGT00940000177277 ENSGT00940000161997.a ENSGT00390000013151.a.a.a ENSGT00940000160639.a ENSGT01100000263998 ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b ENSGT00940000166136 ENSGT00940000160835 ENSGT00940000167103 ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT01040000240400.c.a.b.b ENSGT00950000183208.A.c.a #22 ENSGT00950000183184.a.a.b ENSGT00390000006826 ENSGT00940000165235.a.a ENSGT00940000155675.p.b ENSGT00950000183140.a.a ENSGT00550000074981 ENSGT00510000047334 ENSGT00940000155749.d ENSGT00940000154360.A.b.b ENSGT00940000162768.B.b ENSGT00390000004923.C ENSGT00390000001718.b ENSGT00950000183038.a.b.b.b.r ENSGT00950000183165.a.a.a ENSGT00940000154657.A.d Indian medaka MODERN SPECIES 20 sh3bp4a (ENSOMEG00000019774) ENSOMEG00000019798 ENSOMEG00000019814 AOX1 (ENSOMEG00000019941) bzw1a (ENSOMEG00000019988) ENSOMEG00000020006 ENSOMEG00000020038 ENSOMEG00000020053 ENSOMEG00000020061 KIF5C (ENSOMEG00000020228) #16 MBD5 (ENSOMEG00000020281) #19 orc4 (ENSOMEG00000020335) #20 ACVR2A (ENSOMEG00000020423) #21 ENSOMEG00000020445 ENSOMEG00000020453 zeb2b (ENSOMEG00000020511) #22 FAM171B (ENSOMEG00000020541) ENSOMEG00000020567 ENSOMEG00000020589 ENSOMEG00000020601 ENSOMEG00000020623 pwp2h (ENSOMEG00000020671) eed (ENSOMEG00000020708) ENSOMEG00000020746 ENSOMEG00000020760 LRRC3 (ENSOMEG00000020765) ENSOMEG00000020811 ENSOMEG00000020831 gpd2 (ENSOMEG00000020845) NR4A2 (ENSOMEG00000020865) TUBA4A (ENSOMEG00000020878) Javanese ricefish MODERN SPECIES 11 sh3bp4a (ENSOJAG00000002935) ENSOJAG00000002924 ENSOJAG00000002919 ENSOJAG00000002914 bzw1a (ENSOJAG00000000657) ENSOJAG00000000650 ENSOJAG00000000641 ENSOJAG00000000634 KIF5C (ENSOJAG00000000574) #16 ENSOJAG00000000556 #19 MBD5 (ENSOJAG00000000554) #19 orc4 (ENSOJAG00000000527) #20 ACVR2A (ENSOJAG00000000471) #21 ENSOJAG00000000428 ENSOJAG00000000414 zeb2b (ENSOJAG00000000338) #22 ENSOJAG00000000086 ENSOJAG00000000067 ENSOJAG00000022984 ENSOJAG00000022978 ENSOJAG00000022951 eed (ENSOJAG00000022814) ATP7B (ENSOJAG00000022389) LRRC3 (ENSOJAG00000022345) ENSOJAG00000022299 ENSOJAG00000022286 gpd2 (ENSOJAG00000021848) TUBA4A (ENSOJAG00000021745) ENSOJAG00000021533 ENSOJAG00000021491 inpp4ab (ENSOJAG00000020924) Oryzias_a ANCESTRAL SPECIES 56 ENSGT00940000155311.B ENSGT00940000154486.b.b.a.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000161997.a ENSGT00390000013151.a.a.a ENSGT00940000160639.a ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b ENSGT00940000167103 ENSGT00940000158539.b #16 ENSGT00530000064137.a.b #19 ENSGT00390000016542 #20 ENSGT00940000157233.c #21 ENSGT01040000240400.c.a.b.b ENSGT01100000264591 ENSGT00950000183208.A.c.a #22 ENSGT00950000183184.a.a.b ENSGT00940000165235.a.a ENSGT00950000183140.a.a ENSGT00550000074981 ENSGT00510000047334 ENSGT00940000155749.d ENSGT00940000154360.A.b.b ENSGT00940000162768.B.b ENSGT00390000004923.C ENSGT00390000001718.b ENSGT00950000183038.a.b.b.b.r ENSGT00950000183165.a.a.a ENSGT00940000154657.A.d ENSGT00940000157360.c ENSGT00940000164908 Japanese Medaka HdrR MODERN SPECIES 11 ahr1b (ENSORLG00000000137) ENSORLG00000000135 s100b (ENSORLG00000028907) sh3bp4a (ENSORLG00000000133) ENSORLG00000026726 aox6 (ENSORLG00000000125) bzw1a (ENSORLG00000000117) ENSORLG00000000115 ENSORLG00000000112 KIF5C (ENSORLG00000000108) #16 MBD5 (ENSORLG00000000104) #19 orc4 (ENSORLG00000000103) #20 ACVR2A (ENSORLG00000000099) #21 ENSORLG00000027108 ENSORLG00000024724 zeb2b (ENSORLG00000000098) #22 ENSORLG00000000095 ENSORLG00000000091 ENSORLG00000023624 ENSORLG00000000079 ENSORLG00000029677 ENSORLG00000000068 pwp2h (ENSORLG00000000066) eed (ENSORLG00000030215) ENSORLG00000000063 LRRC3 (ENSORLG00000000061) ENSORLG00000000059 ENSORLG00000027750 gpd2 (ENSORLG00000000052) ENSORLG00000000050 ENSORLG00000000046 Chinese medaka MODERN SPECIES 381 ENSOSIG00000015293 zeb2b (ENSOSIG00000015256) #22 Tiger tail seahorse MODERN SPECIES 404 ENSHCOG00000017484 SLC9A2 (ENSHCOG00000017234) inpp4ab (ENSHCOG00000016979) zgc:113142 (ENSHCOG00000016820) ALS2 (ENSHCOG00000016773) MPP4 (ENSHCOG00000016686) tmem237b (ENSHCOG00000015966) cyp20a1 (ENSHCOG00000015947) abi2b (ENSHCOG00000015448) ENSHCOG00000015424 ENSHCOG00000015273 ENSHCOG00000015259 MBD5 (ENSHCOG00000015223) #19 orc4 (ENSHCOG00000015200) #20 ACVR2A (ENSHCOG00000015188) #21 zeb2b (ENSHCOG00000015167) #22 ENSHCOG00000000763 MAGI3 (ENSHCOG00000015141) ENSHCOG00000015106 rca2.1 (ENSHCOG00000015077) ENSHCOG00000015058 kif3b (ENSHCOG00000015045) ENSHCOG00000015015 kif3b (ENSHCOG00000014998) PCMTD2 (ENSHCOG00000000727) MYT1 (ENSHCOG00000014939) TBC1D22B (ENSHCOG00000014913) snrpg (ENSHCOG00000014878) ENSHCOG00000014866 plpbp (ENSHCOG00000014847) tmed4 (ENSHCOG00000014723) Pinecone sodierfish MODERN SPECIES 11 ENSMMDG00005022217 KLHL10 (ENSMMDG00005022219) st6gal2b (ENSMMDG00005022221) ENSMMDG00005022223 nck2b (ENSMMDG00005022226) dph3 (ENSMMDG00005022230) ENSMMDG00005022235 ENSMMDG00005022237 fhl2b (ENSMMDG00005022240) ENSMMDG00005022243 ENSMMDG00005022250 KIF5C (ENSMMDG00005022336) #16 MBD5 (ENSMMDG00005022339) #19 orc4 (ENSMMDG00005022341) #20 ACVR2A (ENSMMDG00005022347) #21 zeb2b (ENSMMDG00005022363) #22 ENSMMDG00005022368 KYNU (ENSMMDG00005022372) #25 ENSMMDG00005022381 ENSMMDG00005022385 bzw1a (ENSMMDG00005022388) AOX1 (ENSMMDG00005022409) ENSMMDG00005022414 sh3bp4a (ENSMMDG00005022415) s100b (ENSMMDG00005022417) ENSMMDG00005022419 ENSMMDG00005022420 ENSMMDG00005022423 ftcd (ENSMMDG00005002661) mstna (ENSMMDG00005002688) stat1a (ENSMMDG00005002760) Cod MODERN SPECIES 56 ENSGMOG00000014388 #22 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 277 ENSGT00940000153470.a.a.a.a.h ENSGT00390000001170.a.b ENSGT00940000155759.c ENSGT00940000160383 ENSGT00940000171141 ENSGT00940000154311.b ENSGT00530000063686.a.a #9 ENSGT00940000157541.e #11 ENSGT00390000015050.`b.b #13 ENSGT00390000000220.B.c.a #14 ENSGT00390000000220.B.c.b #14 ENSGT00940000158539.a.l #16 ENSGT00940000158526 #18 ENSGT00530000064137.a.b.c #19 ENSGT00940000157233.b #21 ENSGT00950000183208.A.c.a.s #22 ENSGT00900000143214 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00390000008033 #25 ENSGT00940000157521.a.a.a.a ##26 Asian bonytongue MODERN SPECIES 13 tmem163a (ENSSFOG00015013757) acmsd (ENSSFOG00015013796) CCNT2 (ENSSFOG00015013826) rab3gap1 (ENSSFOG00015013870) ZRANB3 (ENSSFOG00015014001) R3HDM1 (ENSSFOG00015014134) #37 UBXN4 (ENSSFOG00015014378) #36 rnd3a (ENSSFOG00015030279) #11 mmadhca (ENSSFOG00015014453) #13 LYPD6 (ENSSFOG00015014472) #14 KIF5C (ENSSFOG00015014505) #16 epc2 (ENSSFOG00015014568) #18 MBD5 (ENSSFOG00015006495) #19 ACVR2A (ENSSFOG00015006516) #21 ENSSFOG00015028999 zeb2b (ENSSFOG00015006557) #22 ENSSFOG00015024415 gtdc1 (ENSSFOG00015006586) #23 arhgap15 (ENSSFOG00015006616) #24 KYNU (ENSSFOG00015006641) #25 LRP1B (ENSSFOG00015006789) ##26 bzw1a (ENSSFOG00015007027) ARL4C (ENSSFOG00015024371) sh3bp4a (ENSSFOG00015007127) ENSSFOG00015007141 s100b (ENSSFOG00015029983) ENSSFOG00015029802 ENSSFOG00015029155 ENSSFOG00015007166 ndufa10 (ENSSFOG00015007190) ENSSFOG00015007210 P. kingsleyae MODERN SPECIES 151 rnd3a (ENSPKIG00000011603) #11 MMADHC (ENSPKIG00000011626) #13 lypd6 (ENSPKIG00000011656) #14 KIF5C (ENSPKIG00000011708) #16 ENSPKIG00000011799 ENSPKIG00000011811 #18 MBD5 (ENSPKIG00000011828) #19 ACVR2A (ENSPKIG00000011845) #21 ENSPKIG00000011877 zeb2b (ENSPKIG00000011898) #22 ENSPKIG00000011922 gtdc1 (ENSPKIG00000011945) #23 arhgap15 (ENSPKIG00000012000) #24 KYNU (ENSPKIG00000012039) #25 ENSPKIG00000012059 LRP1B (ENSPKIG00000012105) ##26 TMEM256 (ENSPKIG00000012256) ENSPKIG00000012266 bzw1a (ENSPKIG00000012285) ENSPKIG00000012315 Osteoglossiformes ANCESTRAL SPECIES 345 ENSGT00390000015050.`b.a #13 ENSGT00390000000220.B.d #14 ENSGT00390000000220.A #15 ENSGT00940000158539.a.k #16 ENSGT00530000064137.a.b.d #19 ENSGT00390000016542 #20 ENSGT00940000157233.a #21 ENSGT00950000183208.A.c.a.t #22 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.nb ENSGT00950000183114.a.b.b ENSGT00940000160639.b.b ENSGT00390000013151.a.a.a.f Asian bonytongue MODERN SPECIES 3 TMEM163 (ENSSFOG00015020195) CCNT2 (ENSSFOG00015020175) ENSSFOG00015020163 ENSSFOG00015019851 #37 ENSSFOG00015030318 ENSSFOG00015019700 #9 rnd3a (ENSSFOG00015028705) #11 mmadhcb (ENSSFOG00015019602) #13 ENSSFOG00015026236 #14 lypd6b (ENSSFOG00015024714) #15 KIF5C (ENSSFOG00015019517) #16 EPC2 (ENSSFOG00015019449) #18 MBD5 (ENSSFOG00015019421) #19 orc4 (ENSSFOG00015019383) #20 ACVR2A (ENSSFOG00015026082) #21 zeb2b (ENSSFOG00015019297) #22 ENSSFOG00015019155 ##26 ENSSFOG00015019073 ENSSFOG00015030562 bzw1a (ENSSFOG00015019024) aox5 (ENSSFOG00015018805) ADPRH (ENSSFOG00015018749) ENSSFOG00015018683 ARL4C (ENSSFOG00015025876) sh3bp4a (ENSSFOG00015018596) ENSSFOG00015018575 ENSSFOG00015028806 ENSSFOG00015017761 ENSSFOG00015027148 ENSSFOG00015017617 ENSSFOG00015017574 P. kingsleyae MODERN SPECIES 192 CCNT2 (ENSPKIG00000004631) ENSPKIG00000004594 ENSPKIG00000004579 R3HDM1 (ENSPKIG00000004328) #37 ENSPKIG00000004064 rnd3a (ENSPKIG00000003968) #11 mmadhcb (ENSPKIG00000003948) #13 ENSPKIG00000003918 #14 lypd6b (ENSPKIG00000003883) #15 KIF5C (ENSPKIG00000003824) #16 EPC2 (ENSPKIG00000003738) #18 ENSPKIG00000003700 #19 MBD5 (ENSPKIG00000003673) #19 orc4 (ENSPKIG00000003619) #20 ACVR2A (ENSPKIG00000003523) #21 zeb2b (ENSPKIG00000003462) #22 Spotted gar MODERN SPECIES 650 ZRANB3 (ENSLOCG00000001673) R3HDM1 (ENSLOCG00000001641) #37 UBXN4 (ENSLOCG00000001630) #36 ENSLOCG00000001612 NMI (ENSLOCG00000001598) #9 ENSLOCG00000001583 rnd3b (ENSLOCG00000001573) #11 mmadhca (ENSLOCG00000001561) #13 lypd6 (ENSLOCG00000001546) #14 lypd6b (ENSLOCG00000001536) #15 KIF5C (ENSLOCG00000001468) #16 epc2 (ENSLOCG00000001437) #18 MBD5 (ENSLOCG00000001417) #19 orc4 (ENSLOCG00000001369) #20 acvr2aa (ENSLOCG00000001336) #21 zeb2b (ENSLOCG00000001301) #22 gtdc1 (ENSLOCG00000001286) #23 arhgap15 (ENSLOCG00000001273) #24 KYNU (ENSLOCG00000001250) #25 ENSLOCG00000017825 LRP1B (ENSLOCG00000001123) #26 ENSLOCG00000001087 ENSLOCG00000001058 NXPH2 (ENSLOCG00000001038) #27 spopla (ENSLOCG00000001012) #28 HNMT (ENSLOCG00000000995) #29 hnmt (ENSLOCG00000000982) #29 THSD7B (ENSLOCG00000000959) #31 cxcr4a (ENSLOCG00000000937) #32 dars1 (ENSLOCG00000000902) #33 mcm6 (ENSLOCG00000000872) #34 Elephant shark MODERN SPECIES 1531 ENSCMIG00000010264 ENSCMIG00000010279 ENSCMIG00000010283 nmi (ENSCMIG00000010291) #9 ENSCMIG00000010299 #10 rnd3b (ENSCMIG00000010307) #11 SPATA24 (ENSCMIG00000010319) mmadhca (ENSCMIG00000010322) #13 lypd6 (ENSCMIG00000010328) #14 lypd6b (ENSCMIG00000010332) #15 KIF5C (ENSCMIG00000010334) #16 epc2 (ENSCMIG00000010341) #18 MBD5 (ENSCMIG00000010349) #19 orc4 (ENSCMIG00000010361) #20 acvr2aa (ENSCMIG00000010399) #21 zeb2b (ENSCMIG00000010466) #22 gtdc1 (ENSCMIG00000010473) #23 ARHGAP15 (ENSCMIG00000010475) #24 KYNU (ENSCMIG00000010480) #25 ENSCMIG00000010485 LRP1B (ENSCMIG00000010555) #26 ENSCMIG00000010783 Gnathostomata ANCESTRAL SPECIES ENSGT00950000183208.A.c.b ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00950000183208.A.c.b ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00950000183208.A.c.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT00950000183208.A.c.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000183208.A.c.b ##22 Clupeocephala ANCESTRAL SPECIES 129 ENSGT00950000182905.a.a.a.a.b ENSGT00940000167133 ENSGT00940000160544 ENSGT01090000259987.a.a.a ENSGT00940000155992.c.a ENSGT00530000063273.b.a.a ENSGT00940000178952 ENSGT00720000108822 ENSGT00940000153969.b ENSGT00940000165503 ENSGT00940000166532 ENSGT00940000157440.m.a ENSGT00940000155324 #35 ENSGT00940000166747 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00940000181338 ENSGT00940000160639.b.a.b.a ENSGT00390000013151.a.a.b ENSGT00940000160532.h ENSGT00510000049102 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.e.a.a.a ENSGT00940000154486.b.b.a.b ENSGT00940000162556.A.b Otomorpha ANCESTRAL SPECIES 249 ENSGT00940000160205 #36 ENSGT00940000165390.a ENSGT00940000154311.b ENSGT00530000063686.a.a #9 ENSGT00940000157541.f.b #11 ENSGT00940000157541.f.a #11 ENSGT00390000015050.`b.a #13 ENSGT00390000000220.B.c.a #14 ENSGT00390000000220.A #15 ENSGT00940000158539.a #16 ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00940000160639.b.a.b.b.b ENSGT00390000013151.a.a.b ENSGT00940000160532.h.b ENSGT00510000049102 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.e.a.a.a ENSGT00940000154486.b.b.a.b ENSGT00940000162556.A.b ENSGT00390000007364.i ENSGT00940000158837 ENSGT00940000154311.a.b ENSGT00940000165191 ENSGT00940000155282 Clupeiformes ANCESTRAL SPECIES 318 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00940000160639.b.b ENSGT00390000013151.a.a.b ENSGT00940000160532.h.b ENSGT00530000065251.b ENSGT00510000049102 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.e.a.a.a ENSGT00940000154486.b.b.a.b ENSGT00940000162556.A.b ENSGT00390000007364.i ENSGT00940000158837 ENSGT00940000154311.a.b ENSGT00940000165191 Atlantic herring MODERN SPECIES 11 uxs1 (ENSCHAG00000020918) ecrg4a (ENSCHAG00000020910) ENSCHAG00000020898 ENSCHAG00000020891 ENSCHAG00000020875 FHL2 (ENSCHAG00000020834) si:dkeyp-118h3.6 (ENSCHAG00000020826) mmadhcb (ENSCHAG00000020810) #13 LYPD6 (ENSCHAG00000020799) #14 lypd6b (ENSCHAG00000020782) #15 KIF5C (ENSCHAG00000020504) #16 ENSCHAG00000020483 epc2 (ENSCHAG00000020427) #18 ENSCHAG00000020409 #19 acvr2aa (ENSCHAG00000019235) #21 zeb2a (ENSCHAG00000019144) ##22 gtdc1 (ENSCHAG00000019106) #23 arhgap15 (ENSCHAG00000019010) #24 ADPRH (ENSCHAG00000018999) ARL4C (ENSCHAG00000018993) sh3bp4 (ENSCHAG00000018981) ENSCHAG00000018949 ENSCHAG00000016312 ENSCHAG00000016249 gypc (ENSCHAG00000016222) ndufa10 (ENSCHAG00000016156) ENSCHAG00000015809 ahr1b (ENSCHAG00000015641) ENSCHAG00000015628 faima (ENSCHAG00000015598) ENSCHAG00000015546 Denticle herring MODERN SPECIES 19 ENSDCDG00000022998 ENSDCDG00000022999 ENSDCDG00000023000 ccnb3 (ENSDCDG00000023001) ENSDCDG00000023002 ENSDCDG00000023005 ENSDCDG00000023008 rif1 (ENSDCDG00000014194) #7 PTGFRN (ENSDCDG00000014740) igsf3l (ENSDCDG00000014764) ENSDCDG00000014774 igsf3 (ENSDCDG00000014788) ENSDCDG00000014814 tnfaip6 (ENSDCDG00000014855) #8 acvr2aa (ENSDCDG00000014876) #21 zeb2a (ENSDCDG00000015413) ##22 gtdc1 (ENSDCDG00000015415) #23 arhgap15 (ENSDCDG00000015421) #24 arl4cb (ENSDCDG00000016126) sh3bp4 (ENSDCDG00000016129) ENSDCDG00000016132 ENSDCDG00000016135 ENSDCDG00000016255 ENSDCDG00000017006 ENSDCDG00000017010 ENSDCDG00000017013 ENSDCDG00000017021 ndufa10 (ENSDCDG00000017034) ENSDCDG00000017141 ENSDCDG00000017142 faima (ENSDCDG00000017144) Otophysi ANCESTRAL SPECIES 98 ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00730000111249.f ENSGT00940000155868.f ENSGT00390000001083 ENSGT00950000182808.a.a.a.a.a ENSGT00390000007644 ENSGT00940000163874 ENSGT00940000158318 ENSGT00980000203459 ENSGT00950000182906.b.b ENSGT00390000016696 ENSGT00940000162599 ENSGT00940000160342.e ENSGT00470000042284 Characiphysae ANCESTRAL SPECIES 107 ENSGT00940000155759.e.a ENSGT00940000160383.e ENSGT00940000158539.a #16 ENSGT00390000000220.A #15 ENSGT00390000000220.B.c.a #14 ENSGT00390000015050.`b.a #13 ENSGT00940000157541.f.a #11 ENSGT00940000157541.f.b #11 ENSGT00530000063686.a.a #9 ENSGT00940000165390.a ENSGT00940000160205 #36 ENSGT00390000006705 ENSGT00940000156095.m.b #37 ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00730000111249.f ENSGT00940000155868.f Channel catfish MODERN SPECIES 25 ccnt2a (ENSIPUG00000002060) ENSIPUG00000002052 KIF5C (ENSIPUG00000002020) #16 lypd6b (ENSIPUG00000002010) #15 Lypd6 (ENSIPUG00000001987) #14 mmadhcb (ENSIPUG00000001943) #13 rnd3b (ENSIPUG00000001926) #11 RND3 (ENSIPUG00000001902) #11 nmi (ENSIPUG00000001883) #9 ENSIPUG00000001876 UBXN4 (ENSIPUG00000001849) #36 rab3gap1 (ENSIPUG00000001801) R3HDM1 (ENSIPUG00000001676) #37 epc2 (ENSIPUG00000001653) #18 acvr2aa (ENSIPUG00000001630) #21 zeb2a (ENSIPUG00000001605) ##22 gtdc1 (ENSIPUG00000001575) #23 arhgap15 (ENSIPUG00000001559) #24 arglu1 (ENSIPUG00000001542) efnb2a (ENSIPUG00000001518) sec22a (ENSIPUG00000001444) adcy5 (ENSIPUG00000001390) PTPLB (ENSIPUG00000001338) stam2 (ENSIPUG00000001294) cacnb4a (ENSIPUG00000001244) ENSIPUG00000001224 zgc:162396 (ENSIPUG00000001213) ENSIPUG00000001199 ENSIPUG00000001178 zgc:162396 (ENSIPUG00000001171) zgc:162396 (ENSIPUG00000001159) Characiphysae_b ANCESTRAL SPECIES 98 ENSGT00940000160383.e ENSGT00940000160383.f ENSGT00940000158539.a #16 ENSGT00390000000220.A #15 ENSGT00390000000220.B.c.a #14 ENSGT00390000015050.`b.a #13 ENSGT00940000157541.f.a #11 ENSGT00940000157541.f.b #11 ENSGT00530000063686.a.a #9 ENSGT00940000165390.a ENSGT00940000160205 #36 ENSGT00390000006705 ENSGT00940000156095.m.b #37 ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00730000111249.f ENSGT00940000155868.f Characoidei ANCESTRAL SPECIES 396 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00730000111249.f ENSGT00940000155868.f Red-bellied piranha MODERN SPECIES 255 epc2 (ENSPNAG00000002277) #18 zeb2a (ENSPNAG00000012558) ##22 gtdc1 (ENSPNAG00000012598) #23 arhgap15 (ENSPNAG00000012644) #24 arglu1a (ENSPNAG00000012659) efnb2a (ENSPNAG00000012693) Mexicana tetra MODERN SPECIES 10 ENSAMXG00000039670 ENSAMXG00000037377 ENSAMXG00000041942 ENSAMXG00000043262 ENSAMXG00000029736 ENSAMXG00000035655 ENSAMXG00000015097 ENSAMXG00000039355 ENSAMXG00000041983 ENSAMXG00000033010 ENSAMXG00000029102 ENSAMXG00000030310 ENSAMXG00000030445 ENSAMXG00000041529 ENSAMXG00000036236 zeb2a (ENSAMXG00000012825) ##22 gtdc1 (ENSAMXG00000012801) #23 arhgap15 (ENSAMXG00000012771) #24 ENSAMXG00000030974 arglu1a (ENSAMXG00000040993) efnb2a (ENSAMXG00000012739) ENSAMXG00000038504 ENSAMXG00000030710 ENSAMXG00000038472 ENSAMXG00000011058 MCF2L (ENSAMXG00000011036) ENSAMXG00000011020 ENSAMXG00000011002 ENSAMXG00000030358 ENSAMXG00000030023 dnajc3a (ENSAMXG00000034027) Electric eel MODERN SPECIES 270 epc2 (ENSEEEG00000010378) #18 acvr2aa (ENSEEEG00000010382) #21 zeb2a (ENSEEEG00000010429) ##22 gtdc1 (ENSEEEG00000010431) #23 arhgap15 (ENSEEEG00000010433) #24 arglu1a (ENSEEEG00000010436) efnb2a (ENSEEEG00000010437) Cyprinoidei ANCESTRAL SPECIES 71 ENSGT00940000165788 ENSGT00940000160335 ENSGT00940000155282 ENSGT00940000160585 ENSGT00940000159528 ENSGT01040000240539.b ENSGT00390000011864 ENSGT01050000244937.a.a.r ENSGT00390000012063 ENSGT00950000183115.b.a.m.a ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00730000111249.f ENSGT00940000155868.f ENSGT00390000001083 ENSGT00950000182808.a.a.a.a.a ENSGT00940000166466.e.a ENSGT00390000007644 ENSGT00940000163874 ENSGT00940000158318 ENSGT00980000203459 ENSGT00950000182906.b.b ENSGT00390000016696 ENSGT00940000162599 ENSGT00940000160342.e Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 900 ENSGT00950000183208.A.c.b.a ##22 ENSGT00390000006631.b #23 ENSGT00950000182860.a.b.b.b #24 ENSGT00730000111249.f.b ENSGT00940000155868.f.a ENSGT00990000210091 Goldfish MODERN SPECIES 49 ENSCARG00000002181 chaf1b (ENSCARG00000002155) ENSCARG00000001848 srpx (ENSCARG00000001802) ENSCARG00000001782 OTC (ENSCARG00000001765) mid1ip1a (ENSCARG00000001758) ENSCARG00000001754 acvr2aa (ENSCARG00000001724) #21 epc2 (ENSCARG00000001715) #18 itm2bb (ENSCARG00000069406) med4 (ENSCARG00000069386) HTR2A (ENSCARG00000069378) esd (ENSCARG00000069364) LRCH1 (ENSCARG00000069280) zeb2a (ENSCARG00000069258) ##22 gtdc1 (ENSCARG00000069251) #23 arhgap15 (ENSCARG00000069237) #24 crygs2 (ENSCARG00000069223) lcmt2 (ENSCARG00000069199) tbccd1 (ENSCARG00000069185) rab5b (ENSCARG00000069179) dbr1 (ENSCARG00000069177) ENSCARG00000069172 armc8 (ENSCARG00000068631) ENSCARG00000068508 efnb2a (ENSCARG00000068498) arglu1a (ENSCARG00000068488) SYTL5 (ENSCARG00000068455) asb11 (ENSCARG00000068436) piga (ENSCARG00000068391) Cyprininae_a ANCESTRAL SPECIES 564 ENSGT00390000011864.lb ENSGT01050000244937.a.a.r.a ENSGT00390000012063.r ENSGT00950000183115.b.a.m.a.g ENSGT00940000158526.q #18 ENSGT00940000157233.d.b #21 ENSGT00950000183208.A.c.b.a ##22 ENSGT00390000006631.b #23 ENSGT00950000182860.a.b.b.b #24 ENSGT00730000111249.f.b ENSGT00940000155868.f.a ENSGT00990000210091 Common carp reference MODERN SPECIES 46 ENSCCRG00000080642 cavin2a (ENSCCRG00000078445) tmeff2a (ENSCCRG00000028574) ENSCCRG00000062919 ENSCCRG00000071997 slc39a10 (ENSCCRG00000059358) DNAH7 (ENSCCRG00000032206) RUBCNL (ENSCCRG00000048959) LRCH1 (ENSCCRG00000065088) esd (ENSCCRG00000045893) HTR2A (ENSCCRG00000045888) med4 (ENSCCRG00000071131) itm2bb (ENSCCRG00000072380) epc2 (ENSCCRG00000036485) #18 acvr2aa (ENSCCRG00000030240) #21 zeb2a (ENSCCRG00000028151) ##22 gtdc1 (ENSCCRG00000071619) #23 arglu1a (ENSCCRG00000008160) arhgap15 (ENSCCRG00000020455) #24 efnb2a (ENSCCRG00000068680) ENSCCRG00000080738 slc10a2 (ENSCCRG00000014101) nepro (ENSCCRG00000014097) ENSCCRG00000014090 poglut2 (ENSCCRG00000055120) ENSCCRG00000078112 stxbp5l (ENSCCRG00000028134) gtf2e1 (ENSCCRG00000006759) lcmt2 (ENSCCRG00000006763) crygs2 (ENSCCRG00000006767) tbccd1 (ENSCCRG00000023688) Golden-line barbel MODERN SPECIES 546 cavin2a (ENSSGRG00000050964) tmeff2a (ENSSGRG00000050966) slc39a10 (ENSSGRG00000050968) ENSSGRG00000050969 ENSSGRG00000050970 ENSSGRG00000050971 ENSSGRG00000050972 RUBCNL (ENSSGRG00000050973) LRCH1 (ENSSGRG00000050979) esd (ENSSGRG00000050982) HTR2A (ENSSGRG00000051010) med4 (ENSSGRG00000051012) itm2bb (ENSSGRG00000051033) epc2 (ENSSGRG00000051043) #18 acvr2aa (ENSSGRG00000051044) #21 zeb2a (ENSSGRG00000051068) ##22 gtdc1 (ENSSGRG00000051071) #23 arhgap15 (ENSSGRG00000051073) #24 arglu1a (ENSSGRG00000051074) efnb2a (ENSSGRG00000051075) Cyprininae ANCESTRAL SPECIES 16 ENSGT00940000160585 ENSGT00940000159528.f.a.a ENSGT00390000011864.lb ENSGT01050000244937.a.a.r.a ENSGT00390000012063.r ENSGT00950000183115.b.a.m.a.g ENSGT00940000158526.q #18 ENSGT00940000157233.d.b #21 ENSGT00940000159528.e ENSGT00390000011864.mb ENSGT01050000244937.a.a.r.b ENSGT00390000012063.q ENSGT00950000183115.b.a.m.a.h ENSGT00940000158526.r #18 ENSGT00940000157233.d.a #21 ENSGT00950000183208.A.c.b.b ##22 ENSGT00390000006631.a #23 ENSGT00950000182860.a.b.b.a #24 ENSGT00730000111249.f.a ENSGT00940000155868.f.b.b ENSGT00390000001083 ENSGT00950000182808.a.a.a.a.a.h ENSGT00390000007644.c ENSGT00940000163874 ENSGT00940000158318 ENSGT00950000182906.b.b.j ENSGT00950000182906.b.b.i ENSGT00390000016696.g ENSGT00940000160342.e.b ENSGT00470000042284.b ENSGT00940000166096.d Goldfish MODERN SPECIES 27 maip1 (ENSCARG00000007267) ENSCARG00000007206 HECW2 (ENSCARG00000007119) stk17b (ENSCARG00000007085) zgc:153521 (ENSCARG00000007072) cavin2a (ENSCARG00000007030) tmeff2a (ENSCARG00000006981) slc39a10 (ENSCARG00000006918) LRCH1 (ENSCARG00000006535) esd (ENSCARG00000006417) HTR2A (ENSCARG00000006400) med4 (ENSCARG00000006375) itm2bb (ENSCARG00000006366) epc2 (ENSCARG00000005979) #18 acvr2aa (ENSCARG00000005885) #21 zeb2a (ENSCARG00000046791) ##22 gtdc1 (ENSCARG00000046778) #23 arhgap15 (ENSCARG00000046746) #24 arglu1a (ENSCARG00000046730) efnb2a (ENSCARG00000046715) ENSCARG00000046707 gtpbp8 (ENSCARG00000046699) slc10a2 (ENSCARG00000046667) tlr20.2 (ENSCARG00000046638) ENSCARG00000046628 ENSCARG00000046617 stxbp5l (ENSCARG00000046351) gtf2e1 (ENSCARG00000046283) crygs2 (ENSCARG00000046258) tbccd1 (ENSCARG00000046247) rab5b (ENSCARG00000046225) Cyprininae_a ANCESTRAL SPECIES 205 ENSGT00940000155812 ENSGT00950000182910.a.a.c.c ENSGT00940000156056.A.b.a.a ENSGT00940000156056.A.a ENSGT00940000160335.h ENSGT00940000155282.f ENSGT00940000160585 ENSGT00940000159528.f.a.a ENSGT00940000159528.e ENSGT00390000011864.mb ENSGT01050000244937.a.a.r.b ENSGT00390000012063.q ENSGT00950000183115.b.a.m.a.h ENSGT00940000158526.r #18 ENSGT00940000157233.d.a #21 ENSGT00950000183208.A.c.b.b ##22 ENSGT00390000006631.a #23 ENSGT00950000182860.a.b.b.a #24 ENSGT00730000111249.f.a ENSGT00940000155868.f.b.b ENSGT00390000001083 ENSGT00950000182808.a.a.a.a.a.g ENSGT00940000166466.e.a ENSGT00390000007644.d Common carp reference MODERN SPECIES 41 ENSCCRG00000008012 nabp1a (ENSCCRG00000079565) cavin2a (ENSCCRG00000006447) ENSCCRG00000055466 tmeff2a (ENSCCRG00000026162) ENSCCRG00000054412 ENSCCRG00000054189 slc39a10 (ENSCCRG00000031869) LRCH1 (ENSCCRG00000068869) esd (ENSCCRG00000078861) HTR2A (ENSCCRG00000058961) med4 (ENSCCRG00000036593) itm2bb (ENSCCRG00000036536) epc2 (ENSCCRG00000072265) #18 acvr2aa (ENSCCRG00000066448) #21 zeb2a (ENSCCRG00000061380) ##22 arhgap15 (ENSCCRG00000028170) #24 gtdc1 (ENSCCRG00000028168) #23 arglu1a (ENSCCRG00000060356) efnb2a (ENSCCRG00000074165) ENSCCRG00000062032 gtpbp8 (ENSCCRG00000055105) slc10a2 (ENSCCRG00000006965) tlr20.2 (ENSCCRG00000081428) stxbp5l (ENSCCRG00000006964) gtf2e1 (ENSCCRG00000028740) crygs2 (ENSCCRG00000028289) tbccd1 (ENSCCRG00000023575) rab5b (ENSCCRG00000067152) dbr1 (ENSCCRG00000023585) armc8 (ENSCCRG00000031008) Golden-line barbel MODERN SPECIES 858 zeb2a (ENSSGRG00000030189) ##22 gtdc1 (ENSSGRG00000030179) #23 arhgap15 (ENSSGRG00000030178) #24 efnb2a (ENSSGRG00000030172) Zebrafish MODERN SPECIES 24 ftcdnl1 (ENSDARG00000062423) nabp1a (ENSDARG00000004692) cavin2a (ENSDARG00000027611) tmeff2a (ENSDARG00000051824) ENSDARG00000044355 slc39a10 (ENSDARG00000005823) DNAH7 (ENSDARG00000060165) ENSDARG00000088402 LRCH1 (ENSDARG00000078778) esd (ENSDARG00000019496) HTR2A (ENSDARG00000057029) med4 (ENSDARG00000041503) itm2bb (ENSDARG00000041505) epc2 (ENSDARG00000007485) #18 acvr2aa (ENSDARG00000011188) #21 zeb2a (ENSDARG00000062338) ##22 gtdc1 (ENSDARG00000020642) #23 arhgap15 (ENSDARG00000062349) #24 arglu1a (ENSDARG00000019223) efnb2a (ENSDARG00000020164) ENSDARG00000094811 gtpbp8 (ENSDARG00000075033) slc10a2 (ENSDARG00000014916) ENSDARG00000115923 tlr20.2 (ENSDARG00000088701) ENSDARG00000114057 ENSDARG00000092668 nepro (ENSDARG00000043566) ENSDARG00000030636 poglut2 (ENSDARG00000031971) ENSDARG00000094791 Euteleosteomorpha ANCESTRAL SPECIES 29 ENSGT01030000234607.A.a.a.a.d ENSGT00390000006705 ENSGT00940000156095.m.b #37 ENSGT00940000160205 #36 ENSGT00940000165390.a ENSGT00940000154311.b ENSGT00530000063686.a.a #9 ENSGT00940000157541.f.c #11 ENSGT00940000157541.f.d #11 ENSGT00390000015050.`b.a #13 ENSGT00390000000220.B.c.b #14 ENSGT00390000000220.A #15 ENSGT00940000158539.a #16 ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00940000181338 ENSGT00940000160639.b.a.b.a ENSGT00390000013151.a.a.b ENSGT00940000160532.h ENSGT00510000049102 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.e.a.a.a ENSGT00940000154486.b.b.a.b ENSGT00940000162556.A.b ENSGT00950000182836.b.b.b.a ENSGT00390000003874.a.a ENSGT00940000173884 ENSGT00940000158589.b.a Acanthomorphata ANCESTRAL SPECIES 51 ENSGT00390000006705 ENSGT00940000156095.m.b #37 ENSGT00940000160205 #36 ENSGT00940000165390.a ENSGT00940000154311.b ENSGT00530000063686.a.a #9 ENSGT00940000157541.f.c #11 ENSGT00940000157541.f.d #11 ENSGT00390000015050.`b.a #13 ENSGT00390000000220.B.c.b #14 ENSGT00390000000220.A #15 ENSGT00940000158539.a #16 ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00940000181338 ENSGT00940000160639.b.a.b.a ENSGT00390000013151.a.a.b ENSGT00940000160532.h ENSGT00510000049102 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.e.a.a.a ENSGT00940000154486.b.b.a.b ENSGT00940000162556.A.b ENSGT00950000182836.b.b.b.a ENSGT00390000003874.a.a ENSGT01050000244857.B.b ENSGT00940000159052 Euacanthomorphacea ANCESTRAL SPECIES 113 ENSGT00390000006705 ENSGT00940000156095.m.b #37 ENSGT00940000160205 #36 ENSGT00940000165390.a ENSGT00530000063686.a.a #9 ENSGT00940000157541.f.c #11 ENSGT00940000157541.f.d #11 ENSGT00390000015050.`b.a #13 ENSGT00390000000220.B.c.b #14 ENSGT00390000000220.A #15 ENSGT00940000158539.a #16 ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00940000181338 Percomorphaceae ANCESTRAL SPECIES 136 ENSGT00940000158539.a #16 ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00940000181338 Percomorphaceae_B ANCESTRAL SPECIES 45 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00940000157233.d #21 ENSGT00940000158526 #18 ENSGT00940000158539.a #16 ENSGT00950000182860.a.b.b #24 ENSGT00940000181338 Ovalentaria ANCESTRAL SPECIES 27 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158539.a #16 ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT01100000263523.A.z.d.h ENSGT01100000263523.G.a.b.b ENSGT01100000263523.H.a ENSGT01100000263532.C.d.b.b ENSGT01100000263523.J ENSGT01100000263523.I.b ENSGT01100000263523.I.a.a.b ENSGT01100000263523.F ENSGT01100000263523.E ENSGT01100000263532.C.c.b ENSGT00940000156449.b.b ENSGT01000000215047 ENSGT00940000157879 ENSGT01030000234640.a.b.a.b Atherinomorphae ANCESTRAL SPECIES 60 ENSGT00950000182860.a.b.b #24 ENSGT00940000158539.a #16 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00940000154551.b.h.b ENSGT00940000157879 ENSGT01030000234640.a.b.a.b ENSGT00940000158193 ENSGT00510000047718.d ENSGT00940000164964.b ENSGT00940000164697.a ENSGT01100000263523.A.z.d.g.b ENSGT01100000263532.B.a.b ENSGT00940000177542 ENSGT01100000263532.A.b.d ENSGT01100000263532.A.a.b.h.a ENSGT00940000171516 ENSGT01100000263532.A.a.a.b.b.a.a.a Cyprinodontiformes ANCESTRAL SPECIES 57 ENSGT00950000182860.a.b.b #24 ENSGT00940000158539.a #16 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00940000154551.b.h.a.a.a ENSGT00940000154551.b.h.a.a.b.a ENSGT00940000157879 ENSGT01030000234640.a.b.a.b ENSGT00940000158193 ENSGT00510000047718.d ENSGT00940000164964.b ENSGT00940000164697.a ENSGT01100000263523.A.z.d.g.b ENSGT01100000263532.B.a.b.b ENSGT00940000177542 ENSGT01100000263532.A.b.d ENSGT01100000263532.A.a.b.i ENSGT00940000171516 Aplocheiloidei ANCESTRAL SPECIES ENSGT00950000183208.A.c.b ##22 Mangrove rivulus MODERN SPECIES 767 CDK16 (ENSKMAG00000014627) abt1 (ENSKMAG00000014675) rad51c (ENSKMAG00000014692) zeb2a (ENSKMAG00000014703) ##22 Turquoise killifish MODERN SPECIES 1617 ENSNFUG00015007634 ENSNFUG00015007644 ENSNFUG00015007651 ENSNFUG00015007657 ENSNFUG00015007660 ENSNFUG00015007667 ENSNFUG00015007672 ENSNFUG00015007679 ENSNFUG00015007691 ENSNFUG00015007720 ENSNFUG00015007721 ENSNFUG00015007726 ENSNFUG00015007728 ENSNFUG00015007735 ENSNFUG00015007739 zeb2a (ENSNFUG00015007743) ##22 ENSNFUG00015007851 ENSNFUG00015009003 aoc1 (ENSNFUG00015009046) ENSNFUG00015009069 ENSNFUG00015009082 ENSNFUG00015009095 BAMBIA (ENSNFUG00015009648) ENSNFUG00015009663 lancl2 (ENSNFUG00015009679) VOPP1 (ENSNFUG00015009725) ENSNFUG00015009729 HECW1 (ENSNFUG00015009820) ENSNFUG00015010481 ENSNFUG00015010484 U2SURP (ENSNFUG00015010506) Cyprinodontoidei ANCESTRAL SPECIES 13 ENSGT00940000155992.c.a ENSGT00530000063273.b.a.a ENSGT00720000108822 ENSGT00940000153969.b ENSGT00940000165503 ENSGT00940000166532 ENSGT00940000157440.m.a ENSGT00940000166747 ENSGT00940000155324.g.a.b #35 ENSGT00940000155324.g.a.a #35 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000160560.b.f.b.b.b ENSGT00940000160560.b.f.b.b.a ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00940000154551.b.h.a.a.a ENSGT00940000154551.b.h.b.b.b.a NAME_4 ANCESTRAL SPECIES 81 ENSGT00940000155992.c.a ENSGT00530000063273.b.a.a ENSGT00720000108822 ENSGT00940000153969.b ENSGT00940000165503 ENSGT00940000166532 ENSGT00940000157440.m.a ENSGT00940000166747 ENSGT00940000155324.g.a.b #35 ENSGT00940000155324.g.a.a #35 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000160560.b.f.b.b.b ENSGT00940000160560.b.f.b.b.a ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00940000154551.b.h.b.b.a ENSGT00940000154551.b.h.b.b.b.a ENSGT01100000263523.A.z.d.g.a ENSGT01100000263532.B.a.a ENSGT01100000263532.B.a.b.b ENSGT01100000263532.B.b ENSGT00940000171516 ENSGT01100000263532.A.a.a.b.b.a.a.a ENSGT01100000263532.A.a.a.a.a.b ENSGT01100000263523.G.a.b.b ENSGT01100000263523.A.z.d.h ENSGT01100000263523.J Mummichog MODERN SPECIES 362 ENSFHEG00000002993 ENSFHEG00000002997 acvr2aa (ENSFHEG00000003022) #21 zeb2a (ENSFHEG00000003043) ##22 gtdc1 (ENSFHEG00000003057) #23 ENSFHEG00000000090 ENSFHEG00000003087 ENSFHEG00000003107 ENSFHEG00000003117 ENSFHEG00000003153 ENSFHEG00000003178 ENSFHEG00000003188 ENSFHEG00000003218 ENSFHEG00000003250 ENSFHEG00000003278 ENSFHEG00000003316 ENSFHEG00000003332 ENSFHEG00000003351 ENSFHEG00000003372 Sheepshead minnow MODERN SPECIES 433 agr1 (ENSCVAG00000006174) traf3ip1 (ENSCVAG00000006250) asb1 (ENSCVAG00000000181) ENSCVAG00000006292 twist2 (ENSCVAG00000006332) hdac4 (ENSCVAG00000006486) LCT (ENSCVAG00000007000) #35 ENSCVAG00000007057 #35 ENSCVAG00000007068 #35 arhgap15 (ENSCVAG00000007082) #24 kif5c (ENSCVAG00000007118) ENSCVAG00000007184 ENSCVAG00000007214 ENSCVAG00000007239 acvr2aa (ENSCVAG00000007298) #21 zeb2a (ENSCVAG00000007330) ##22 gtdc1 (ENSCVAG00000007416) #23 ENSCVAG00000007432 ENSCVAG00000007454 ENSCVAG00000007463 Poeciliinae ANCESTRAL SPECIES 25 ENSGT00940000155992.c.a ENSGT00530000063273.b.a.a ENSGT00720000108822 ENSGT00940000153969.b ENSGT00940000165503 ENSGT00940000166532 ENSGT00940000157440.m.a ENSGT00940000166747 ENSGT00940000155324.g.a.b.a #35 ENSGT00940000155324.g.a.a #35 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000160560.b.f.b.b.b ENSGT00940000160560.b.f.b.b.a ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00940000154551.b.h.a.a.a ENSGT01030000235294 ENSGT00940000154551.b.h.a.a.b.b ENSGT00940000154551.b.h.b.b.b.a ENSGT01100000263523.A.z.d.g.a ENSGT01100000263532.B.b ENSGT01100000263532.A.a.a.a.b.a.a.a ENSGT01100000263532.A.a.a.b.b.b.a.b ENSGT01100000263532.B.a.b.a ENSGT00940000177542 ENSGT01100000263532.A.b.d ENSGT01100000263532.A.a.b.i ENSGT01100000263532.A.a.a.a.b.a.a.b ENSGT00940000164964.b Poecilia ANCESTRAL SPECIES 13 ENSGT00940000155992.c.a ENSGT00530000063273.b.a.a ENSGT00720000108822 ENSGT00940000153969.b ENSGT00940000165503 ENSGT00940000166532 ENSGT00940000157440.m.a ENSGT00940000155324.g.a.b.a #35 ENSGT00940000155324.g.a.a #35 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000160560.b.f.b.b.b ENSGT00940000160560.b.f.b.b.a.a.b ENSGT00940000160560.b.f.b.b.a.b ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00940000154551.b.h.a.a.a.d.a ENSGT01030000235294 ENSGT00940000154551.b.h.a.a.b.b ENSGT00940000154551.b.h.b.b.b.a ENSGT01100000263523.A.z.d.g.a ENSGT01100000263532.C.c.b.w.a ENSGT01100000263523.A.z.d.g.b ENSGT01100000263532.B.a.b.a ENSGT00940000177542 ENSGT01100000263532.A.b.d ENSGT01100000263532.A.a.b.i ENSGT01100000263532.A.a.a.a.b.a.a.b ENSGT01100000263532.A.a.a.b.b.a.a.a ENSGT01100000263532.A.a.a.b.b.a.b NAME_6 ANCESTRAL SPECIES 298 ENSGT00940000160560.b.f.b.b.a.b ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00940000154551.b.h.b.b.b.a ENSGT01100000263523.A.z.d.g.a ENSGT01100000263532.C.c.b.w.a ENSGT01100000263532.A.a.a.b.b.a.a.a ENSGT01100000263532.A.a.a.b.b.a.b ENSGT01100000263532.A.a.a.b.b.b.a.a ENSGT01100000263523.D ENSGT01100000263532.C.c.b.x ENSGT00940000156449.b.b ENSGT00940000154551.b.h.a.a.a.d.a.a.b ENSGT01030000235294 ENSGT00940000154551.b.h.a.a.b.b Sailfin molly MODERN SPECIES 1522 ENSPLAG00000017992 acvr2aa (ENSPLAG00000018047) #21 zeb2a (ENSPLAG00000018082) ##22 gtdc1 (ENSPLAG00000018114) #23 Amazon molly MODERN SPECIES 550 tmem163a (ENSPFOG00000016885) ENSPFOG00000016839 ENSPFOG00000016685 LCT (ENSPFOG00000016611) #35 arhgap15 (ENSPFOG00000016569) #24 kif5c (ENSPFOG00000016455) ENSPFOG00000021938 ENSPFOG00000016413 ENSPFOG00000022446 ENSPFOG00000016367 ENSPFOG00000016364 acvr2aa (ENSPFOG00000016327) #21 zeb2a (ENSPFOG00000016296) ##22 gtdc1 (ENSPFOG00000016267) #23 ENSPFOG00000022620 ENSPFOG00000016255 ENSPFOG00000020861 TTN (ENSPFOG00000016019) BMPR2 (ENSPFOG00000015893) ENSPFOG00000015884 ENSPFOG00000023800 ENSPFOG00000024223 Guppy MODERN SPECIES 450 traf3ip1 (ENSPREG00000016667) asb1 (ENSPREG00000016757) ENSPREG00000016778 twist2 (ENSPREG00000016807) hdac4 (ENSPREG00000016847) ENSPREG00000016875 #35 LCT (ENSPREG00000016914) #35 arhgap15 (ENSPREG00000017096) #24 kif5c (ENSPREG00000017123) ENSPREG00000017208 ENSPREG00000017224 ENSPREG00000017243 ENSPREG00000017268 ENSPREG00000017281 acvr2aa (ENSPREG00000017310) #21 zeb2a (ENSPREG00000017347) ##22 gtdc1 (ENSPREG00000017361) #23 ENSPREG00000017379 ENSPREG00000017390 ENSPREG00000017422 ENSPREG00000017458 ENSPREG00000017529 ENSPREG00000017546 ENSPREG00000017579 ENSPREG00000017735 ENSPREG00000017758 ENSPREG00000017822 ENSPREG00000017835 ENSPREG00000017853 ENSPREG00000017866 ENSPREG00000017926 Platyfish MODERN SPECIES 21 traf3ip1 (ENSXMAG00000025470) agr1 (ENSXMAG00000027156) asb1 (ENSXMAG00000002068) ENSXMAG00000027897 twist2 (ENSXMAG00000020062) hdac4 (ENSXMAG00000002072) ENSXMAG00000028159 LCT (ENSXMAG00000002096) #35 LCT (ENSXMAG00000000123) #35 arhgap15 (ENSXMAG00000023083) #24 ENSXMAG00000023444 ENSXMAG00000000083 #16 ENSXMAG00000029117 ENSXMAG00000014360 acvr2aa (ENSXMAG00000002106) #21 zeb2a (ENSXMAG00000002123) ##22 gtdc1 (ENSXMAG00000002131) #23 ENSXMAG00000019771 ENSXMAG00000027550 ENSXMAG00000026684 ENSXMAG00000027574 ENSXMAG00000024927 ENSXMAG00000027704 ENSXMAG00000023600 ENSXMAG00000028664 ENSXMAG00000022825 ENSXMAG00000028616 ENSXMAG00000027903 ENSXMAG00000028731 ENSXMAG00000023366 ENSXMAG00000025163 Oryzias ANCESTRAL SPECIES 75 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00940000157879 ENSGT00390000012914 ENSGT00940000165301.a ENSGT01100000263523.A.z.d.h.w.a ENSGT01100000263532.A.b.c.b ENSGT01100000263532.A.a.a.a.a.a ENSGT01100000263523.I.b ENSGT01100000263523.I.a.a.a.b ENSGT01100000263523.E ENSGT00940000156449.b.b ENSGT01000000214434.B.a.a ENSGT00680000100037 ENSGT00940000155065.xb.a ENSGT00940000154657.A.c Oryzias_b ANCESTRAL SPECIES 118 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00940000157879 ENSGT00390000012914 ENSGT00940000165301.a ENSGT01100000263523.A.z.d.h.w.a ENSGT01100000263532.A.b.c.b ENSGT01100000263532.A.a.a.a.a.a ENSGT01100000263523.I.b ENSGT01100000263523.I.a.a.b ENSGT01100000263523.L.d Javanese ricefish MODERN SPECIES 8 ENSOJAG00000004685 PLCL1 (ENSOJAG00000004658) satb2 (ENSOJAG00000004485) tbccd1 (ENSOJAG00000004328) crygs1 (ENSOJAG00000004187) lcmt2 (ENSOJAG00000004082) rab5b (ENSOJAG00000004045) armc8 (ENSOJAG00000003372) ENSOJAG00000003231 idh1 (ENSOJAG00000003097) ENSOJAG00000003073 AKAP11 (ENSOJAG00000003063) kif5c (ENSOJAG00000002875) ENSOJAG00000002855 ENSOJAG00000002809 zeb2a (ENSOJAG00000002773) ##22 gtdc1 (ENSOJAG00000002753) #23 ENSOJAG00000002656 tp53rk (ENSOJAG00000002627) ENSOJAG00000002617 ENSOJAG00000002610 ENSOJAG00000002596 ENSOJAG00000002527 ENSOJAG00000002482 ACO1 (ENSOJAG00000002137) ENSOJAG00000002008 ENSOJAG00000001985 RAPH1 (ENSOJAG00000019489) crygm3 (ENSOJAG00000019468) ENSOJAG00000019437 ENSOJAG00000019372 Indian medaka MODERN SPECIES 48 zgc:77929 (ENSOMEG00000014405) MRPL21 (ENSOMEG00000014420) ENSOMEG00000014441 cdc6 (ENSOMEG00000014493) CCSAP (ENSOMEG00000014519) ACTA1 (ENSOMEG00000014560) nup133 (ENSOMEG00000014612) taf5l (ENSOMEG00000014627) capn9 (ENSOMEG00000014725) ENSOMEG00000014751 ENSOMEG00000014762 ENSOMEG00000014776 ENSOMEG00000014788 ENSOMEG00000014803 ENSOMEG00000014815 zeb2a (ENSOMEG00000014917) ##22 gtdc1 (ENSOMEG00000014991) #23 ENSOMEG00000015032 ENSOMEG00000015111 tp53rk (ENSOMEG00000015137) ENSOMEG00000015162 Oryzias_a ANCESTRAL SPECIES 97 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00940000157879 ENSGT00390000012914 ENSGT00940000165301.a ENSGT01100000263523.A.z.d.h.w.a ENSGT01100000263532.B.b ENSGT01100000263532.A.a.b.i ENSGT01100000263523.K ENSGT01100000263523.G.a.b.b ENSGT01100000263523.H.a ENSGT01100000263523.I.a.a.a.b ENSGT01100000263523.E ENSGT00940000156449.b.b ENSGT01000000214434.B.a.a ENSGT00680000100037 Japanese Medaka HdrR MODERN SPECIES 13 ENSORLG00000024162 ENSORLG00000024267 ENSORLG00000029063 ENSORLG00000026896 ENSORLG00000022769 ENSORLG00000023577 ENSORLG00000019359 crygm3 (ENSORLG00000019353) ENSORLG00000025010 ENSORLG00000024821 etv5a (ENSORLG00000020852) itgb5 (ENSORLG00000020862) ENSORLG00000022262 ENSORLG00000020867 #7 tnfaip6 (ENSORLG00000018870) #8 ENSORLG00000020157 ##22 gtdc1 (ENSORLG00000020145) #23 ENSORLG00000022014 MYLK (ENSORLG00000020132) tp53rk (ENSORLG00000027986) ENSORLG00000022481 ENSORLG00000023694 ENSORLG00000030355 ENSORLG00000025583 ENSORLG00000025823 ENSORLG00000024835 ENSORLG00000026975 ENSORLG00000029121 ENSORLG00000025067 ENSORLG00000024269 ENSORLG00000028350 Chinese medaka MODERN SPECIES 1128 zeb2a (ENSOSIG00000010015) ##22 MYLK (ENSOSIG00000009990) tp53rk (ENSOSIG00000009989) ENSOSIG00000009987 ENSOSIG00000009986 ENSOSIG00000009984 ENSOSIG00000009983 ENSOSIG00000009982 ENSOSIG00000009980 ENSOSIG00000022392 ENSOSIG00000022388 ENSOSIG00000022381 ENSOSIG00000022369 zgc:172295 (ENSOSIG00000022357) ddx18 (ENSOSIG00000022345) actr3 (ENSOSIG00000022324) Ovalentaria_B ANCESTRAL SPECIES 64 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158539.a #16 ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00940000154551.b.h.b ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.b ENSGT00940000177386 ENSGT01100000263523.G.a.a.d.e.a ENSGT01100000263523.G.a.b.b ENSGT01100000263523.H.a ENSGT01100000263523.J ENSGT01100000263523.I.a.a.b ENSGT01100000263523.E ENSGT01100000263532.C.c.a.a.b Cichlidae ANCESTRAL SPECIES 49 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00940000154551.b.h.b.e.a ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.a.a ENSGT01100000263532.B.a.b ENSGT00940000177542 ENSGT01100000263532.A.b.d ENSGT00940000171516 ENSGT01100000263532.A.b.c.a ENSGT01100000263532.A.a.a.b.b.a.a.a ENSGT01100000263523.B ENSGT01100000263523.G.b ENSGT01100000263523.F ENSGT01100000263532.B.b ENSGT00940000177386 Pseudocrenilabrinae ANCESTRAL SPECIES 15 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00940000154551.b.h.b.e.a ENSGT00940000156449.b.b ENSGT00940000154551.b.h.a.c.b ENSGT01000000215047 ENSGT00940000157879 ENSGT01030000234640.a.b.a.b ENSGT00940000158193 ENSGT00510000047718.d ENSGT00390000011821 ENSGT00940000155131 ENSGT00510000051617 ENSGT00940000158406 ENSGT00970000196894 ENSGT00910000144271.C.a.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 14 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00940000154551.b.h.b.e.a ENSGT01100000263523.I.b ENSGT01100000263523.A.z.d.h ENSGT01100000263523.G.b ENSGT01100000263523.I.a.a.b ENSGT01100000263523.I.a.b ENSGT01100000263532.C.c.a.a.a.e.a ENSGT01100000263532.A.a.b.i ENSGT01000000215574 ENSGT01100000263532.A.a.a.b.b.a.b ENSGT01100000263532.A.a.a.a.b.a.b ENSGT01100000263523.L.d.a ENSGT01100000263523.F ENSGT01100000263532.B.b Haplochromini ANCESTRAL SPECIES 19 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.b ENSGT00940000177386 ENSGT01100000263523.G.b ENSGT01100000263523.I.a.a.b ENSGT01100000263523.I.a.b ENSGT01100000263532.C.c.a.a.a.e.a ENSGT01100000263532.A.a.b.i ENSGT01000000215574 ENSGT01100000263532.A.a.a.b.b.a.b ENSGT01100000263532.A.a.a.a.b.a.b ENSGT01100000263523.L.d.a ENSGT01100000263523.F ENSGT00940000156449.b.b Haplochromini_A ANCESTRAL SPECIES 19 ENSGT00940000158539.a #16 ENSGT00950000182860.a.b.b.h #24 ENSGT00940000154801.p ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT01100000263532.A.a.a.a.b.b ENSGT01100000263532.A.a.a.b.b.a.a.b ENSGT01100000263532.A.a.a.a.a.a ENSGT01100000263532.A.a.a.a.a.b ENSGT00940000156449.b.b ENSGT00940000154551.b.h.a.c.b ENSGT01100000264348.a ENSGT01020000231334.b ENSGT01000000215047 ENSGT00940000157879 ENSGT01030000234640.a.b.a.b ENSGT00940000158193 ENSGT00510000047718.d ENSGT00390000011821 Haplochromini_B DUPLICATION Haplochromini_B ANCESTRAL SPECIES 122 ENSGT00940000158539.a #16 ENSGT00950000182860.a.b.b.h #24 ENSGT00940000154801.p ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b.c ##22 ENSGT00390000006631 #23 ENSGT01100000263532.A.b.c.b ENSGT01100000263532.A.a.a.a.a.a ENSGT01100000263532.A.a.a.a.a.b ENSGT00990000205261 Zebra mbuna MODERN SPECIES 1098 arhgap15 (ENSMZEG00005006552) #24 ENSMZEG00005006543 kif5c (ENSMZEG00005006494) acvr2aa (ENSMZEG00005006462) #21 ENSMZEG00005006441 zeb2a (ENSMZEG00005006424) ##22 gtdc1 (ENSMZEG00005006406) #23 ENSMZEG00005006391 ENSMZEG00005006366 ENSMZEG00005006347 ENSMZEG00005006335 ENSMZEG00005006313 ENSMZEG00005006296 ENSMZEG00005006288 ENSMZEG00005006241 ENSMZEG00005006213 ENSMZEG00005006187 ENSMZEG00005006133 ENSMZEG00005006111 ENSMZEG00005006016 ENSMZEG00005005983 Eastern happy MODERN SPECIES 7 ENSACLG00000010605 ENSACLG00000010622 ENSACLG00000010632 ENSACLG00000010641 ENSACLG00000010685 ENSACLG00000010701 ENSACLG00000010706 ENSACLG00000010717 ENSACLG00000010727 ENSACLG00000010744 ENSACLG00000010746 ENSACLG00000010803 ENSACLG00000010816 gtdc1 (ENSACLG00000010846) #23 zeb2a (ENSACLG00000010854) ##22 zeb2a (ENSACLG00000010904) ##22 ENSACLG00000010958 acvr2aa (ENSACLG00000010961) #21 ENSACLG00000011003 arhgap15 (ENSACLG00000011050) #24 ENSACLG00000011101 #16 Haplochromini_B ANCESTRAL SPECIES ENSGT00950000183208.A.c.b.d ##22 Eastern happy MODERN SPECIES 7 ENSACLG00000011101 #16 arhgap15 (ENSACLG00000011050) #24 ENSACLG00000011003 acvr2aa (ENSACLG00000010961) #21 ENSACLG00000010958 zeb2a (ENSACLG00000010904) ##22 zeb2a (ENSACLG00000010854) ##22 gtdc1 (ENSACLG00000010846) #23 ENSACLG00000010816 ENSACLG00000010803 ENSACLG00000010746 ENSACLG00000010744 ENSACLG00000010727 ENSACLG00000010717 ENSACLG00000010706 ENSACLG00000010701 ENSACLG00000010685 ENSACLG00000010641 ENSACLG00000010632 ENSACLG00000010622 ENSACLG00000010605 ENSACLG00000010485 P. nyererei MODERN SPECIES 564 zeb2a (ENSPNYG00000023289) ##22 gtdc1 (ENSPNYG00000023296) #23 ENSPNYG00000023299 ENSPNYG00000023302 ENSPNYG00000023306 ENSPNYG00000023309 ENSPNYG00000023317 ENSPNYG00000023324 ENSPNYG00000023329 ENSPNYG00000023334 ENSPNYG00000023338 ENSPNYG00000023344 ENSPNYG00000023347 ENSPNYG00000023348 ENSPNYG00000023349 ENSPNYG00000023351 Burton s mouthbrooder MODERN SPECIES 740 zeb2a (ENSHBUG00000021872) ##22 ENSHBUG00000021891 #23 ENSHBUG00000021913 ENSHBUG00000021928 ENSHBUG00000021936 ENSHBUG00000021951 ENSHBUG00000021961 ENSHBUG00000021974 ENSHBUG00000022030 ENSHBUG00000022055 ENSHBUG00000022072 ENSHBUG00000022085 ENSHBUG00000022098 ENSHBUG00000022115 ENSHBUG00000000680 ENSHBUG00000022224 Lyretail cichlid MODERN SPECIES 350 spoplb (ENSNBRG00000020337) #28 NXPH2 (ENSNBRG00000020368) #27 ugt1b1 (ENSNBRG00000020375) ENSNBRG00000020432 ENSNBRG00000020701 clasp1a (ENSNBRG00000020720) tfcp2l1 (ENSNBRG00000020822) ENSNBRG00000020889 ENSNBRG00000020892 ENSNBRG00000020903 inhbb (ENSNBRG00000020940) slc10a2 (ENSNBRG00000021006) arhgap15 (ENSNBRG00000021025) #24 kif5c (ENSNBRG00000021082) acvr2aa (ENSNBRG00000021123) #21 zeb2a (ENSNBRG00000021148) ##22 gtdc1 (ENSNBRG00000021171) #23 ENSNBRG00000021191 ENSNBRG00000021202 ENSNBRG00000021220 ENSNBRG00000021228 ENSNBRG00000021245 ENSNBRG00000021259 ENSNBRG00000021295 ENSNBRG00000021306 ENSNBRG00000021318 ENSNBRG00000021338 ENSNBRG00000021367 ENSNBRG00000021380 ENSNBRG00000021400 ENSNBRG00000021412 Nile tilapia MODERN SPECIES 7 kif5c (ENSONIG00000005818) ENSONIG00000030111 ENSONIG00000030947 acvr2aa (ENSONIG00000005816) #21 ENSONIG00000035020 zeb2a (ENSONIG00000005810) ##22 gtdc1 (ENSONIG00000005809) #23 ENSONIG00000027193 ENSONIG00000039716 ENSONIG00000031335 ENSONIG00000034619 ENSONIG00000040663 ENSONIG00000035248 ENSONIG00000037741 ENSONIG00000028261 ENSONIG00000029514 ENSONIG00000029278 MYLK (ENSONIG00000005779) BMPR2 (ENSONIG00000005789) ENSONIG00000027862 ENSONIG00000028994 Midas cichlid MODERN SPECIES 53 acvr2aa (ENSACIG00000018108) #21 ENSACIG00000018139 zeb2a (ENSACIG00000018149) ##22 gtdc1 (ENSACIG00000018181) #23 ENSACIG00000018206 ENSACIG00000018219 ENSACIG00000018233 ENSACIG00000018252 ENSACIG00000018313 ENSACIG00000018338 ENSACIG00000018349 ENSACIG00000018360 ENSACIG00000018386 ENSACIG00000018643 ENSACIG00000018690 ENSACIG00000018705 ENSACIG00000018861 ENSACIG00000018898 Pomacentridae ANCESTRAL SPECIES 52 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.e.a.a.a ENSGT00940000154486.b.b.a.b ENSGT00940000155248.wb ENSGT00940000166969.a ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00940000172395 ENSGT01050000244823.d.b.b.a.a.b.b.b ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158539.a #16 ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00390000008158.a ENSGT00940000156523.a ENSGT00940000164584 ENSGT00390000002563.b.a.b ENSGT00940000159279 ENSGT00940000155444 ENSGT00940000166829 ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00940000164443.a.a.a ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 Pomacentridae_A ANCESTRAL SPECIES 108 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.e.a.a.a ENSGT00940000154486.b.b.a.b ENSGT00940000155248.wb ENSGT00940000166969.a ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00940000172395 ENSGT01050000244823.d.b.b.a.a.b.b.b ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158539.a #16 ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00390000008158.a ENSGT00940000156523.a ENSGT00940000164584 ENSGT00390000002563.b.a.b ENSGT00940000159279 ENSGT00940000155444 ENSGT00940000166829 ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00940000164443.a.a.a ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 Amphiprion ANCESTRAL SPECIES 61 ENSGT01050000244823.d.b.b.a.a.b.b.b.d ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158539.a #16 ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00390000008158.a ENSGT00940000156523.a ENSGT00940000164584 ENSGT00390000002563.b.a.b ENSGT00940000159279 ENSGT00940000155444 ENSGT00940000166829 ENSGT00390000018717.b.a.b ENSGT01090000260059.a.b.b.b.b.f.a.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00940000164443.a.a.a ENSGT00940000153859.a ENSGT00940000156336 Clown anemonefish MODERN SPECIES 2095 arhgap15 (ENSAOCG00000011852) #24 kif5c (ENSAOCG00000011944) epc2 (ENSAOCG00000011968) #18 acvr2aa (ENSAOCG00000012026) #21 zeb2a (ENSAOCG00000012099) ##22 gtdc1 (ENSAOCG00000012125) #23 Orange clownfish MODERN SPECIES 3 ndufa10 (ENSAPEG00000015951) ahr2 (ENSAPEG00000016009) ahr1b (ENSAPEG00000016065) ENSAPEG00000016639 ENSAPEG00000016757 ENSAPEG00000016811 TTLL4 (ENSAPEG00000016835) ENSAPEG00000016866 FER1L6 (ENSAPEG00000016918) ENSAPEG00000017109 ENSAPEG00000017160 arhgap15 (ENSAPEG00000017177) #24 ENSAPEG00000017221 #16 epc2 (ENSAPEG00000017295) #18 acvr2aa (ENSAPEG00000017321) #21 zeb2a (ENSAPEG00000017463) ##22 gtdc1 (ENSAPEG00000017531) #23 ENSAPEG00000017574 ENSAPEG00000017597 ENSAPEG00000017606 cox17 (ENSAPEG00000017672) popdc2 (ENSAPEG00000017697) pla1a (ENSAPEG00000017718) hsd3b2 (ENSAPEG00000017764) ENSAPEG00000017926 hao2 (ENSAPEG00000017957) wars2 (ENSAPEG00000018028) ENSAPEG00000018063 tbx15 (ENSAPEG00000018092) ENSAPEG00000018203 wdr3 (ENSAPEG00000018223) Spiny chromis MODERN SPECIES 912 ENSAPOG00000011302 arhgap15 (ENSAPOG00000011313) #24 kif5c (ENSAPOG00000011406) epc2 (ENSAPOG00000011428) #18 acvr2aa (ENSAPOG00000011460) #21 zeb2a (ENSAPOG00000011540) ##22 gtdc1 (ENSAPOG00000011597) #23 Bicolor damselfish MODERN SPECIES 660 wdr33 (ENSSPAG00000022727) sft2d3 (ENSSPAG00000022722) ENSSPAG00000022720 rpp40 (ENSSPAG00000022716) riok1 (ENSSPAG00000022710) IMPA1 (ENSSPAG00000022705) impa1 (ENSSPAG00000022671) ENSSPAG00000022664 ENSSPAG00000022661 arhgap15 (ENSSPAG00000022659) #24 ENSSPAG00000022656 #18 kif5c (ENSSPAG00000022645) ENSSPAG00000022641 #18 acvr2aa (ENSSPAG00000022631) #21 zeb2a (ENSSPAG00000022606) ##22 gtdc1 (ENSSPAG00000022590) #23 ENSSPAG00000022582 cox17 (ENSSPAG00000022579) popdc2 (ENSSPAG00000022574) Percomorphaceae_C ANCESTRAL SPECIES 13 ENSGT00940000181338 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158539.a #16 ENSGT00940000158526 #18 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.b ENSGT01100000263532.A.a.a.b.b.a.a.a ENSGT01100000263532.A.a.a.b.b.a.b ENSGT01100000263532.A.a.a.a.b.a.b ENSGT01100000263523.K ENSGT01100000263523.B ENSGT01100000263532.A.a.a.b.b.b ENSGT01100000263532.A.a.a.a.b.b ENSGT01100000263523.G.a.a.d ENSGT01100000263523.G.a.b.b ENSGT01100000263523.H.a ENSGT01100000263523.J ENSGT01100000263523.I.b Percomorphaceae_D ANCESTRAL SPECIES 12 ENSGT00940000181338 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158539.a #16 ENSGT00940000158526 #18 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.a.a ENSGT01100000263532.A.a.b.h.a ENSGT01100000263523.A.y.b ENSGT01100000263532.B.b ENSGT00940000171516 ENSGT01100000263532.A.b.c.b ENSGT01100000263532.A.a.a.b.b.a.a.a ENSGT01100000263532.A.a.a.b.b.a.a.b ENSGT01100000263532.A.a.a.b.b.a.b ENSGT01100000263532.A.a.a.b.b.b ENSGT01100000263523.G.a.a.d ENSGT01100000263523.G.a.b.b ENSGT01100000263523.H.a Anabantaria ANCESTRAL SPECIES 26 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00940000156449.b.b ENSGT00940000157879 ENSGT00940000158193 ENSGT00510000047718.d ENSGT00940000164964.b ENSGT00940000164697.a ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.a.a ENSGT01100000263532.A.a.b.h.a ENSGT00390000006788.a.b ENSGT00390000000693 ENSGT00390000008796 ENSGT00940000164835 ENSGT00390000017619 Anabantoidei ANCESTRAL SPECIES 13 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT01100000263523.A.y.b ENSGT01100000263532.B.b ENSGT01100000263532.A.a.a.b.b.b ENSGT01100000263523.G.a.b.b ENSGT01100000263523.H.a ENSGT01100000263523.J ENSGT01100000263523.I.a.a.b ENSGT00940000156449.b.b ENSGT00940000157879 ENSGT00940000158193 ENSGT00510000047718.d ENSGT00940000164964.b ENSGT00390000006788.a.b ENSGT00390000000693 Climbing perch MODERN SPECIES 12 ENSATEG00000010887 #24 ENSATEG00000011018 ENSATEG00000011118 epc2 (ENSATEG00000011123) #18 acvr2aa (ENSATEG00000011135) #21 ENSATEG00000027131 zeb2a (ENSATEG00000011183) ##22 gtdc1 (ENSATEG00000011230) #23 ENSATEG00000011291 ENSATEG00000011347 ENSATEG00000028836 ENSATEG00000026768 ENSATEG00000011651 ENSATEG00000029529 ENSATEG00000026206 ENSATEG00000027866 ENSATEG00000029828 ENSATEG00000012111 ENSATEG00000012041 ENSATEG00000012295 ENSATEG00000012322 ENSATEG00000012401 Siamese fighting fish MODERN SPECIES 11 ENSBSLG00000024939 #24 kif5c (ENSBSLG00000024974) ENSBSLG00000025058 #18 ENSBSLG00000025060 ENSBSLG00000025063 acvr2aa (ENSBSLG00000025423) #21 zeb2a (ENSBSLG00000025482) ##22 gtdc1 (ENSBSLG00000025496) #23 ENSBSLG00000025506 ENSBSLG00000025512 ENSBSLG00000025517 ENSBSLG00000025520 ENSBSLG00000004874 ENSBSLG00000004905 ENSBSLG00000004999 ENSBSLG00000005029 ENSBSLG00000005170 ube2g2 (ENSBSLG00000005802) TSPEAR (ENSBSLG00000006302) ENSBSLG00000006335 ENSBSLG00000006438 ENSBSLG00000006583 Zig-zag eel MODERN SPECIES 13 ENSMAMG00000016310 ENSMAMG00000016559 ENSMAMG00000016592 ENSMAMG00000016624 ENSMAMG00000016639 ENSMAMG00000016649 ENSMAMG00000016686 ENSMAMG00000016697 ENSMAMG00000016715 ENSMAMG00000016748 ENSMAMG00000025950 ENSMAMG00000016778 #24 ENSMAMG00000016803 epc2 (ENSMAMG00000016848) #18 acvr2aa (ENSMAMG00000016853) #21 zeb2a (ENSMAMG00000016877) ##22 gtdc1 (ENSMAMG00000016907) #23 ENSMAMG00000016929 ENSMAMG00000016941 ENSMAMG00000028563 ENSMAMG00000025644 ENSMAMG00000016980 ENSMAMG00000025167 ENSMAMG00000024925 ENSMAMG00000017041 ENSMAMG00000017068 ENSMAMG00000025864 ENSMAMG00000026810 ENSMAMG00000027011 ENSMAMG00000027362 ENSMAMG00000017367 Carangaria ANCESTRAL SPECIES 12 ENSGT00940000181338 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158539.a #16 ENSGT00940000158526 #18 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00390000013916 ENSGT00940000156449.b.b ENSGT00940000157879 ENSGT01030000234640.a.b.a.b ENSGT00940000158193 ENSGT00510000047718.d ENSGT00980000199010 ENSGT00940000177504 ENSGT01100000263523.J ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.b ENSGT00940000171516 ENSGT01100000263532.A.b.c.b ENSGT01100000263532.A.a.a.b.b.a.a.a Carangaria_A ANCESTRAL SPECIES 99 ENSGT00940000181338 ENSGT00950000182860.a.b.b.f #24 ENSGT00940000154801.p ENSGT00940000158539.a #16 ENSGT00940000158526 #18 ENSGT00940000160560.b.f.b.b.c ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00980000199321 ENSGT01100000263532.A.a.a.a.a.a ENSGT01100000263523.I.a.a.a.a.a ENSGT01100000263523.G.a.a.c.b ENSGT01100000263523.F ENSGT01100000263523.I.a.a.b ENSGT01100000263532.C.c.a.a.a Seriola ANCESTRAL SPECIES 188 ENSGT00950000182860.a.b.b.f #24 ENSGT00940000154801.p ENSGT00940000158526 #18 ENSGT00940000160560.b.f.b.b.c ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 Yellowtail amberjack MODERN SPECIES 2795 arhgap15 (ENSSLDG00000004250) #24 kif5c (ENSSLDG00000004366) ENSSLDG00000004488 #18 ENSSLDG00000004514 acvr2aa (ENSSLDG00000004553) #21 ENSSLDG00000004603 zeb2a (ENSSLDG00000004632) ##22 gtdc1 (ENSSLDG00000004677) #23 ENSSLDG00000004713 Greater amberjack MODERN SPECIES 92 zgc:163073 (ENSSDUG00000004911) arhgap15 (ENSSDUG00000004831) #24 kif5c (ENSSDUG00000004771) epc2 (ENSSDUG00000004728) #18 ENSSDUG00000004704 acvr2aa (ENSSDUG00000004662) #21 zeb2a (ENSSDUG00000004593) ##22 gtdc1 (ENSSDUG00000004537) #23 ENSSDUG00000004518 ENSSDUG00000004491 ENSSDUG00000004457 ENSSDUG00000004444 ENSSDUG00000004413 ENSSDUG00000004395 ENSSDUG00000004335 ENSSDUG00000004291 ENSSDUG00000004203 ENSSDUG00000004140 ENSSDUG00000004122 ENSSDUG00000004110 ENSSDUG00000004071 ENSSDUG00000004028 Barramundi perch MODERN SPECIES 357 acvr2aa (ENSLCAG00010003568) #21 zeb2a (ENSLCAG00010003563) ##22 gtdc1 (ENSLCAG00010003559) #23 ENSLCAG00010003556 ENSLCAG00010003555 ENSLCAG00010003522 ENSLCAG00010003514 ENSLCAG00010003509 ENSLCAG00010003506 ENSLCAG00010003503 ENSLCAG00010003483 ENSLCAG00010003416 ENSLCAG00010003409 ENSLCAG00010003381 ENSLCAG00010003365 ENSLCAG00010003350 ENSLCAG00010003347 Pleuronectoidei ANCESTRAL SPECIES 9 ENSGT00940000159862.a ENSGT00940000165735 ENSGT00950000182808.a.a.a.a.a ENSGT00390000001083 ENSGT00940000155868.f ENSGT00730000111249 ENSGT00390000015050.`b.a #13 ENSGT00940000157541.f.d #11 ENSGT00530000063686.a.a #9 ENSGT00940000160205 #36 ENSGT01090000259987.a.a.a.p ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT01040000241217 ENSGT01100000263523.G.a.b.b ENSGT01100000263523.I.a.a.a.b Turbot MODERN SPECIES 5 ENSSMAG00000015651 dnajc10 (ENSSMAG00000015551) frzb (ENSSMAG00000015533) dusp19a (ENSSMAG00000016328) ENSSMAG00000016339 ENSSMAG00000016374 ENSSMAG00000016399 ENSSMAG00000016424 ENSSMAG00000016457 ENSSMAG00000036960 ENSSMAG00000016584 ENSSMAG00000016626 #24 ENSSMAG00000016646 epc2 (ENSSMAG00000016721) #18 acvr2aa (ENSSMAG00000016733) #21 zeb2a (ENSSMAG00000014179) ##22 gtdc1 (ENSSMAG00000014199) #23 ENSSMAG00000014212 ENSSMAG00000026492 ENSSMAG00000014298 ENSSMAG00000014333 ENSSMAG00000029446 ENSSMAG00000014368 ENSSMAG00000014512 ENSSMAG00000021769 ENSSMAG00000014714 ENSSMAG00000014731 ENSSMAG00000014802 ENSSMAG00000014826 ENSSMAG00000014840 ENSSMAG00000014866 Eupercaria ANCESTRAL SPECIES 18 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158526 #18 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631.d #23 ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.a.a ENSGT00940000177542 ENSGT01100000263532.A.b.d ENSGT01100000263532.A.a.a.b.b.a.a.b ENSGT00980000199321 ENSGT01100000263532.A.a.a.a.a.a ENSGT01100000263523.G.a.b.b ENSGT01100000263523.H.a ENSGT01100000263523.J ENSGT01100000263523.I.b ENSGT01100000263523.I.a.a.b ENSGT01100000263523.E ENSGT01100000263532.B.b Tetraodontidae ANCESTRAL SPECIES 292 ENSGT00940000154801.p ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 Fugu MODERN SPECIES ENSTRUG00000002843 ENSTRUG00000002486 plekhb1 (ENSTRUG00000016952) ENSTRUG00000016948 ENSTRUG00000016942 MPP4 (ENSTRUG00000031911) cnot11 (ENSTRUG00000016939) lcp1 (ENSTRUG00000013955) itm2bb (ENSTRUG00000013964) med4 (ENSTRUG00000014013) sucla2 (ENSTRUG00000014063) ENSTRUG00000032211 esd (ENSTRUG00000029518) kif5c (ENSTRUG00000029212) ENSTRUG00000001801 #21 zeb2a (ENSTRUG00000027167) ##22 Tetraodon MODERN SPECIES 26 ENSTNIG00000005753 ENSTNIG00000005754 sult5a1 (ENSTNIG00000005755) dpep1 (ENSTNIG00000005756) SLC22A31 (ENSTNIG00000005757) ENSTNIG00000005758 ENSTNIG00000005762 kcnk5a (ENSTNIG00000000311) ENSTNIG00000005763 ENSTNIG00000005767 PHB2 (ENSTNIG00000005768) ENSTNIG00000005769 ENSTNIG00000005789 ddx19b (ENSTNIG00000005790) ENSTNIG00000005792 zeb2a (ENSTNIG00000005793) ##22 zgc:153896 (ENSTNIG00000000376) cmtm7 (ENSTNIG00000000085) ENSTNIG00000005794 ENSTNIG00000005795 ENSTNIG00000005796 ENSTNIG00000000975 ENSTNIG00000005799 fars2 (ENSTNIG00000005800) cyb5a (ENSTNIG00000005801) ENSTNIG00000005802 dipk1c (ENSTNIG00000013516) cpt2 (ENSTNIG00000010804) ENSTNIG00000005805 TBC1D22B (ENSTNIG00000005806) COG1 (ENSTNIG00000005808) Eupecaria_A ANCESTRAL SPECIES 18 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158526 #18 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d.d.b #21 ENSGT00940000157233.d.d.a #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631.d #23 ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.a.a ENSGT00940000177542 ENSGT01100000263532.A.b.d ENSGT01100000263532.A.a.a.b.b.a.a.b ENSGT00980000199321 ENSGT01100000263532.A.a.a.b.b.a.a.a ENSGT01100000263532.A.a.a.a.a.b ENSGT01100000263532.A.a.a.a.a.a ENSGT01100000263523.G.a.b.b ENSGT01100000263523.H.a ENSGT01100000263523.J ENSGT01100000263523.C.a.b ENSGT01100000263523.I.b Ballan wrasse MODERN SPECIES 157 zeb2a (ENSLBEG00000001366) ##22 gtdc1 (ENSLBEG00000001335) #23 acvr2aa (ENSLBEG00000001277) #21 ENSLBEG00000001241 kif5c (ENSLBEG00000001127) arhgap15 (ENSLBEG00000001058) #24 ENSLBEG00000001033 gmppaa (ENSLBEG00000001003) pnkd (ENSLBEG00000000985) ENSLBEG00000000971 dars1 (ENSLBEG00000000879) #33 cxcr4a (ENSLBEG00000000869) #32 asic4a (ENSLBEG00000000829) CHPF (ENSLBEG00000000783) pdxka (ENSLBEG00000000742) agpat3 (ENSLBEG00000000684) Eupecaria_B ANCESTRAL SPECIES 18 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158526 #18 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d.d.b.b #21 ENSGT00940000157233.d.d.a #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631.d #23 ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.a.a ENSGT00940000177542 ENSGT01100000263532.A.b.d ENSGT01100000263532.A.a.a.b.b.a.a.b ENSGT00980000199321 ENSGT00940000169215 ENSGT01100000263532.A.b.c.a ENSGT01000000215574 ENSGT01100000263532.A.a.a.b.b.a.b ENSGT01100000263532.A.a.a.b.b.b ENSGT01100000263532.A.a.a.a.b.a.b ENSGT01100000263532.A.a.a.a.b.b ENSGT01100000263523.G.a.a.d Perciformes ANCESTRAL SPECIES 20 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158526.u.a #18 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d.d.a #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631.d #23 ENSGT00940000164697.a ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.b ENSGT01100000263532.A.a.a.b.b.a.a.a ENSGT01100000263532.A.a.a.a.a.b ENSGT01100000263532.A.a.a.a.a.a ENSGT01100000263532.C.c.b ENSGT00940000156449.b.b ENSGT00940000157879 ENSGT00940000158193 ENSGT00510000047718.d ENSGT00980000199010 ENSGT01100000263532.A.a.a.a.b.b ENSGT01100000263532.C.c.a.a.a Perciformes_a ANCESTRAL SPECIES 132 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631.d #23 ENSGT01100000263523.I.b ENSGT01100000263523.I.a.a.b ENSGT00940000156449.b.b Channel bull blenny MODERN SPECIES 77 zeb2a (ENSCGOG00000018680) ##22 gtdc1 (ENSCGOG00000018685) #23 ENSCGOG00000018709 ENSCGOG00000018710 ENSCGOG00000018724 ENSCGOG00000018729 ENSCGOG00000018734 ENSCGOG00000018738 ENSCGOG00000018743 BMPR2 (ENSCGOG00000018745) ENSCGOG00000018747 #18 ENSCGOG00000018749 #18 kif5c (ENSCGOG00000018786) arhgap15 (ENSCGOG00000019888) #24 Pike perch MODERN SPECIES 407 zeb2a (ENSSLUG00000004368) ##22 gtdc1 (ENSSLUG00000004351) #23 Cottioidei ANCESTRAL SPECIES 14 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158526.u.a #18 ENSGT00940000157233.d.d.a #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631.d #23 ENSGT01100000263523.I.a.a.b ENSGT00940000156449.b.b ENSGT00940000157879 ENSGT00940000158193 ENSGT00510000047718.d ENSGT00980000199010 ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.b ENSGT01100000263532.B.a.a ENSGT00940000169215 ENSGT01100000263532.A.a.b.i ENSGT01100000263523.G.b ENSGT01100000263523.F ENSGT00390000006788.a.b Lumpfish MODERN SPECIES 13 popdc2 (ENSCLMG00005015284) cox17 (ENSCLMG00005015281) ENSCLMG00005015280 ENSCLMG00005015278 ENSCLMG00005015277 ENSCLMG00005015276 lats2 (ENSCLMG00005015266) xpo4 (ENSCLMG00005015250) eef1akmt1 (ENSCLMG00005015249) ENSCLMG00005015248 arhgap15 (ENSCLMG00005015246) #24 ENSCLMG00005015030 ENSCLMG00005015014 #18 ENSCLMG00005015010 #18 acvr2aa (ENSCLMG00005014788) #21 zeb2a (ENSCLMG00005014673) ##22 gtdc1 (ENSCLMG00005014668) #23 ENSCLMG00005014666 ENSCLMG00005014664 ENSCLMG00005014661 ENSCLMG00005014653 ENSCLMG00005014647 ENSCLMG00005014642 ENSCLMG00005014641 ENSCLMG00005014640 ENSCLMG00005014636 MYLK (ENSCLMG00005014428) ube2g2 (ENSCLMG00005014423) TSPEAR (ENSCLMG00005014415) ENSCLMG00005014413 ENSCLMG00005014410 Stickleback MODERN SPECIES 517 kif5c (ENSGACG00000000317) epc2 (ENSGACG00000000311) #18 zeb2a (ENSGACG00000000310) ##22 gtdc1 (ENSGACG00000000306) #23 ENSGACG00000000305 ENSGACG00000000301 ENSGACG00000000300 ENSGACG00000000299 ENSGACG00000000294 ube2g2 (ENSGACG00000000291) TSPEAR (ENSGACG00000000289) TTN (ENSGACG00000000274) ENSGACG00000000272 ENSGACG00000000271 ENSGACG00000000269 LMLN (ENSGACG00000000265) ENSGACG00000000264 itgav (ENSGACG00000000260) Eupecaria_C ANCESTRAL SPECIES 61 ENSGT00950000182860.a.b.b #24 ENSGT00940000154801.p ENSGT00940000158526 #18 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d.d.b.b #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631.d #23 ENSGT00390000013916 ENSGT00940000156449.b.b ENSGT00940000157879 ENSGT01030000234640.a.b.a.b ENSGT00940000158193 ENSGT00510000047718.d Gilthead seabream MODERN SPECIES 23 ENSSAUG00010002554 ENSSAUG00010002563 ENSSAUG00010002599 ENSSAUG00010002611 ENSSAUG00010002615 arhgap15 (ENSSAUG00010002635) #24 kif5c (ENSSAUG00010002744) epc2 (ENSSAUG00010003933) #18 ENSSAUG00010003935 ENSSAUG00010003937 ENSSAUG00010003941 acvr2aa (ENSSAUG00010003953) #21 ENSSAUG00010004066 ENSSAUG00010004099 acvr2aa (ENSSAUG00010004257) #21 zeb2a (ENSSAUG00010005690) ##22 ENSSAUG00010006099 gtdc1 (ENSSAUG00010006102) #23 ENSSAUG00010006105 ENSSAUG00010006106 MYLK (ENSSAUG00010006112) BMPR2 (ENSSAUG00010006127) ENSSAUG00010006129 ENSSAUG00010006136 ENSSAUG00010006145 ENSSAUG00010006153 ENSSAUG00010006161 ENSSAUG00010006167 ENSSAUG00010001299 ENSSAUG00010001300 ENSSAUG00010001312 Eupercaria_incertae_sedis ANCESTRAL SPECIES 100 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631.d #23 ENSGT00390000013916 ENSGT00940000156449.b.b ENSGT00940000157879 ENSGT01030000234640.a.b.a.b ENSGT00940000158193 ENSGT00510000047718.d Large yellow croaker MODERN SPECIES 35 ENSLCRG00005001649 zeb2a (ENSLCRG00005001572) ##22 gtdc1 (ENSLCRG00005001527) #23 ENSLCRG00005001512 ENSLCRG00005001458 ENSLCRG00005001437 ENSLCRG00005001425 ENSLCRG00005019812 ENSLCRG00005019803 ENSLCRG00005019796 ENSLCRG00005019782 ENSLCRG00005019765 ENSLCRG00005019463 esd (ENSLCRG00005019361) ENSLCRG00005019352 ENSLCRG00005019344 ENSLCRG00005019321 European seabass MODERN SPECIES 5 ENSDLAG00005033256 ENSDLAG00005034528 ENSDLAG00005034461 ENSDLAG00005032473 ENSDLAG00005028770 ENSDLAG00005033751 ENSDLAG00005027393 ENSDLAG00005002660 ENSDLAG00005012879 ENSDLAG00005010021 acvr2aa (ENSDLAG00005035127) #21 ENSDLAG00005032804 ENSDLAG00005027247 ENSDLAG00005030116 ENSDLAG00005027861 ENSDLAG00005030900 ##22 gtdc1 (ENSDLAG00005034668) #23 ENSDLAG00005033132 #24 ENSDLAG00005030504 ENSDLAG00005006373 ENSDLAG00005031233 #18 ENSDLAG00005031424 ENSDLAG00005026364 ENSDLAG00005026539 ENSDLAG00005003426 ENSDLAG00005003151 ENSDLAG00005026523 ENSDLAG00005031736 ENSDLAG00005027852 ENSDLAG00005010928 ENSDLAG00005033694 Pinecone sodierfish MODERN SPECIES 13 R3HDM1 (ENSMMDG00005011316) #37 UBXN4 (ENSMMDG00005011306) #36 ENSMMDG00005011302 ENSMMDG00005011298 #9 rnd3b (ENSMMDG00005011291) #11 rnd3b (ENSMMDG00005011278) #11 mmadhcb (ENSMMDG00005011275) #13 LYPD6 (ENSMMDG00005011272) #14 lypd6b (ENSMMDG00005011268) #15 ENSMMDG00005011265 ENSMMDG00005011260 ENSMMDG00005011255 KIF5C (ENSMMDG00005011244) #16 epc2 (ENSMMDG00005011233) #18 acvr2aa (ENSMMDG00005011102) #21 zeb2a (ENSMMDG00005011016) ##22 gtdc1 (ENSMMDG00005011009) #23 ENSMMDG00005011004 arhgap15 (ENSMMDG00005010999) #24 ENSMMDG00005010997 Cod MODERN SPECIES 12 ENSGMOG00000023772 ENSGMOG00000028916 ENSGMOG00000034621 ENSGMOG00000011217 ENSGMOG00000011231 ENSGMOG00000011207 #9 RND3 (ENSGMOG00000011197) #11 rnd3b (ENSGMOG00000026348) #11 MMADHC (ENSGMOG00000011181) #13 LYPD6 (ENSGMOG00000034422) #14 LYPD6B (ENSGMOG00000025667) #15 KIF5C (ENSGMOG00000011375) #16 epc2 (ENSGMOG00000013936) #18 ENSGMOG00000013896 #19 acvr2aa (ENSGMOG00000036028) #21 zeb2a (ENSGMOG00000028351) ##22 gtdc1 (ENSGMOG00000010251) #23 arhgap15 (ENSGMOG00000012779) #24 ENSGMOG00000025469 ENSGMOG00000001873 ENSGMOG00000027698 ENSGMOG00000001883 ENSGMOG00000004804 ENSGMOG00000036567 ENSGMOG00000035329 ENSGMOG00000027009 ENSGMOG00000034119 ENSGMOG00000033606 ENSGMOG00000002328 ENSGMOG00000002379 ENSGMOG00000002399 Protacanthopterygii ANCESTRAL SPECIES 18 ENSGT01030000234607.A.a.a.a.d ENSGT00390000006705 ENSGT00940000156095.m.b #37 ENSGT00940000160205 #36 ENSGT00940000165390.a ENSGT00940000154311.b ENSGT00530000063686.a.a #9 ENSGT00940000157541.f.c #11 ENSGT00940000157541.f.d #11 ENSGT00390000015050.`b.a #13 ENSGT00390000000220.B.c.b #14 ENSGT00390000000220.A #15 ENSGT00940000158539.a.e #16 ENSGT00940000158526 #18 ENSGT00940000157233.d #21 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b #24 ENSGT00940000160639.b.a.b.b.b ENSGT00390000013151.a.a.b ENSGT00940000160532.h ENSGT00510000049102 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.e.a.a.a ENSGT00940000154486.b.b.a.b ENSGT00940000162556.A.b ENSGT00390000003874.a.a ENSGT00940000158589.b.a ENSGT01050000244897.a.b.b.a.a ENSGT00940000156856.c ENSGT00940000162795 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 7 ENSGT00940000160383 ENSGT01030000234607.A.a.a.a.d ENSGT00390000006705.g ENSGT00940000156095.m.b.a #37 ENSGT00940000160205.c #36 ENSGT00940000165390.a.k ENSGT00940000157541.f.c.b #11 ENSGT00940000157541.f.d.c #11 ENSGT00390000015050.`b.a.e #13 ENSGT00390000000220.B.c.b.a #14 ENSGT00390000000220.A.c #15 ENSGT00940000158539.a.e #16 ENSGT00940000158526.s #18 ENSGT00530000064137.a.b.u.a #19 ENSGT00940000157233.d.g #21 ENSGT00950000183208.A.c.b.e ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b.c #24 ENSGT00940000160639.b.a.b.b.b.a ENSGT00390000013151.a.a.b.c ENSGT00940000160532.h.c.b ENSGT00940000160532.h.c.a ENSGT00390000016151.g ENSGT00940000154486.b.a.a.b.e.a.a.a.d ENSGT00940000154486.b.b.a.b.b ENSGT00940000162556.A.b ENSGT01090000259985.b.a.a.a ENSGT00950000182836.b.b.b.a.k.a ENSGT00390000003874.a.a.b ENSGT00940000158449.f ENSGT00940000158589.b.a Salmoninae_a ANCESTRAL SPECIES ENSGT00940000160383 ENSGT01030000234607.A.a.a.a.d ENSGT00390000006705.g ENSGT00940000156095.m.b.a #37 ENSGT00940000160205.c #36 ENSGT00940000165390.a.k ENSGT00940000157541.f.c.b #11 ENSGT00940000157541.f.d.c #11 ENSGT00390000015050.`b.a.e #13 ENSGT00390000000220.B.c.b.a #14 ENSGT00390000000220.A.c #15 ENSGT00940000158539.a.e #16 ENSGT00940000158526.s #18 ENSGT00530000064137.a.b.u.a #19 ENSGT00940000157233.d.g #21 ENSGT00950000183208.A.c.b.e ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b.c #24 ENSGT00940000160639.b.a.b.b.b.a ENSGT00390000013151.a.a.b.c ENSGT00940000160532.h.c.b ENSGT00940000160532.h.c.a ENSGT00390000016151.g ENSGT00940000154486.b.a.a.b.e.a.a.a.d ENSGT00940000154486.b.b.a.b.b ENSGT00940000162556.A.b ENSGT01090000259985.b.a.a.a ENSGT00950000182836.b.b.b.a.k.a ENSGT00390000003874.a.a.b ENSGT00940000158449.f ENSGT00940000158589.b.a Salmo ANCESTRAL SPECIES 15 ENSGT00940000160383 ENSGT01030000234607.A.a.a.a.d ENSGT00390000006705.g ENSGT00940000156095.m.b.a #37 ENSGT00940000160205.c #36 ENSGT00940000165390.a.k ENSGT00940000157541.f.c.b #11 ENSGT00940000157541.f.d.c #11 ENSGT00390000015050.`b.a.e #13 ENSGT00390000000220.B.c.b.a #14 ENSGT00390000000220.A.c #15 ENSGT00940000158539.a.e #16 ENSGT00940000158526.s #18 ENSGT00530000064137.a.b.u.a #19 ENSGT00940000157233.d.g #21 ENSGT00950000183208.A.c.b.e ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b.c #24 ENSGT00940000160639.b.a.b.b.b.a ENSGT00390000013151.a.a.b.c ENSGT00940000160532.h.c.b ENSGT00940000160532.h.c.a ENSGT00390000016151.g ENSGT00940000154486.b.a.a.b.e.a.a.a.d ENSGT00940000154486.b.b.a.b.b ENSGT00940000162556.A.b ENSGT01090000259985.b.a.a.a.i ENSGT00950000182836.b.b.b.a.k.a ENSGT00390000003874.a.a.b ENSGT00940000158449.f ENSGT00940000158589.b.a Atlantic salmon MODERN SPECIES 17 ENSSSAG00000046447 ccnt2a (ENSSSAG00000046498) ENSSSAG00000046434 RAB3GAP1 (ENSSSAG00000046103) R3HDM1 (ENSSSAG00000045633) #37 UBXN4 (ENSSSAG00000113024) #36 ENSSSAG00000081672 RND3 (ENSSSAG00000120060) #11 ENSSSAG00000113399 #11 CB025 (ENSSSAG00000081667) #13 LYPD6 (ENSSSAG00000106558) #14 KIF5C (ENSSSAG00000081647) #16 epc2 (ENSSSAG00000081641) #18 MBD5 (ENSSSAG00000081639) #19 acvr2aa (ENSSSAG00000081630) #21 zeb2a (ENSSSAG00000081619) ##22 gtdc1 (ENSSSAG00000081613) #23 RHG15 (ENSSSAG00000081610) #24 adprh (ENSSSAG00000081606) ENSSSAG00000102975 ENSSSAG00000109819 sh3bp4 (ENSSSAG00000081600) ENSSSAG00000069294 ENSSSAG00000081555 ENSSSAG00000081497 ndufa10 (ENSSSAG00000081486) ENSSSAG00000081485 ENSSSAG00000081482 ENSSSAG00000081481 ENSSSAG00000081479 ENSSSAG00000081480 River trout MODERN SPECIES 16 ENSSTUG00000009678 ENSSTUG00000009662 rab3gap1 (ENSSTUG00000007748) R3HDM1 (ENSSTUG00000007546) #37 UBXN4 (ENSSTUG00000007495) #36 ENSSTUG00000007463 RND3 (ENSSTUG00000007449) #11 rnd3b (ENSSTUG00000007411) #11 mmadhcb (ENSSTUG00000007371) #13 LYPD6 (ENSSTUG00000007362) #14 lypd6b (ENSSTUG00000007354) #15 KIF5C (ENSSTUG00000006973) #16 epc2 (ENSSTUG00000006897) #18 MBD5 (ENSSTUG00000006873) #19 acvr2aa (ENSSTUG00000006425) #21 zeb2a (ENSSTUG00000006336) ##22 gtdc1 (ENSSTUG00000006293) #23 arhgap15 (ENSSTUG00000006192) #24 ADPRH (ENSSTUG00000006167) ARL4C (ENSSTUG00000006163) sh3bp4 (ENSSTUG00000006143) ENSSTUG00000003287 ENSSTUG00000050934 ndufa10 (ENSSTUG00000050924) ENSSTUG00000050919 ENSSTUG00000050869 ENSSTUG00000050863 ENSSTUG00000050861 ENSSTUG00000050858 ENSSTUG00000050857 ENSSTUG00000050856 Oncorhynchus ANCESTRAL SPECIES 3 ENSGT01030000234607.A.a.a.a.d ENSGT00390000006705.g ENSGT00940000156095.m.b.a #37 ENSGT00940000160205.c #36 ENSGT00940000165390.a.k ENSGT01010000222294.c.b.b.b.c.a.a.b.a.a ENSGT00940000157541.f.c.b #11 ENSGT00940000157541.f.d.c #11 ENSGT00390000015050.`b.a.e #13 ENSGT00390000000220.B.c.b.a #14 ENSGT00390000000220.A.c #15 ENSGT00940000158539.a.e #16 ENSGT00940000158526.s #18 ENSGT00530000064137.a.b.u.a #19 ENSGT00940000157233.d.g #21 ENSGT00950000183208.A.c.b.e ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b.c #24 ENSGT00940000160639.b.a.b.b.b.a ENSGT00390000013151.a.a.b.c ENSGT00940000160532.h.c.b ENSGT00940000160532.h.c.a ENSGT00390000016151.g ENSGT00940000154486.b.a.a.b.e.a.a.a.d ENSGT00940000154486.b.b.a.b.b ENSGT00940000162556.A.b ENSGT01090000259985.b.a.a.a ENSGT00950000182836.b.b.b.a.k.a ENSGT00390000003874.a.a.b ENSGT00940000158449.f ENSGT00940000158589.b.a Oncorhynchus_a ANCESTRAL SPECIES 8 ENSGT01030000234607.A.a.a.a.d.a ENSGT00390000006705.g ENSGT00940000156095.m.b.a #37 ENSGT00940000160205.c #36 ENSGT00940000165390.a.k ENSGT01010000222294.c.b.b.b.c.a.a.b.a.a ENSGT00940000157541.f.c.b #11 ENSGT00940000157541.f.d.c #11 ENSGT00390000015050.`b.a.e #13 ENSGT00390000000220.B.c.b.a #14 ENSGT00390000000220.A.c #15 ENSGT00940000158539.a.e #16 ENSGT00940000158526.s #18 ENSGT00530000064137.a.b.u.a #19 ENSGT00940000157233.d.g #21 ENSGT00950000183208.A.c.b.e ##22 ENSGT00390000006631 #23 ENSGT00950000182860.a.b.b.c #24 ENSGT00940000160639.b.a.b.b.b.a ENSGT00390000013151.a.a.b.c ENSGT00940000160532.h.c.b ENSGT00940000160532.h.c.a ENSGT00390000016151.g ENSGT00940000154486.b.a.a.b.e.a.a.a.d ENSGT00940000154486.b.b.a.b.b ENSGT00940000162556.A.b ENSGT01090000259985.b.a.a.a.g ENSGT01090000259985.b.a.a.a.h ENSGT00950000182836.b.b.b.a.k.a ENSGT00390000003874.a.a.b ENSGT00940000158449.f Coho salmon MODERN SPECIES 11 ENSOKIG00005048220 rab3gap1 (ENSOKIG00005047115) R3HDM1 (ENSOKIG00005047043) #37 UBXN4 (ENSOKIG00005047036) #36 ENSOKIG00005047027 ENSOKIG00005047017 rnd3b (ENSOKIG00005047005) #11 rnd3b (ENSOKIG00005046975) #11 mmadhcb (ENSOKIG00005046956) #13 LYPD6 (ENSOKIG00005046950) #14 lypd6b (ENSOKIG00005046945) #15 KIF5C (ENSOKIG00005046928) #16 epc2 (ENSOKIG00005046899) #18 MBD5 (ENSOKIG00005046883) #19 acvr2aa (ENSOKIG00005046477) #21 zeb2a (ENSOKIG00005046434) ##22 gtdc1 (ENSOKIG00005046420) #23 arhgap15 (ENSOKIG00005046394) #24 ADPRH (ENSOKIG00005046379) ARL4C (ENSOKIG00005046372) ENSOKIG00005046369 sh3bp4 (ENSOKIG00005046356) ENSOKIG00005043752 ENSOKIG00005041362 ndufa10 (ENSOKIG00005041173) ENSOKIG00005040875 ENSOKIG00005040376 ENSOKIG00005040348 ENSOKIG00005040287 ENSOKIG00005040088 agpat3 (ENSOKIG00005040043) Chinook salmon MODERN SPECIES 22 tmem163a (ENSOTSG00005014699) ccnt2a (ENSOTSG00005014680) ENSOTSG00005014676 ENSOTSG00005014674 rab3gap1 (ENSOTSG00005011394) R3HDM1 (ENSOTSG00005011386) #37 ubxn4 (ENSOTSG00005011381) RND3 (ENSOTSG00005011379) #11 rnd3b (ENSOTSG00005011378) #11 mmadhcb (ENSOTSG00005011375) #13 LYPD6 (ENSOTSG00005011371) #14 lypd6b (ENSOTSG00005011368) #15 KIF5C (ENSOTSG00005011365) #16 ENSOTSG00005011347 #18 acvr2aa (ENSOTSG00005010288) #21 zeb2a (ENSOTSG00005010263) ##22 gtdc1 (ENSOTSG00005010262) #23 arhgap15 (ENSOTSG00005010259) #24 ADPRH (ENSOTSG00005010248) ARL4C (ENSOTSG00005010246) sh3bp4 (ENSOTSG00005010245) ENSOTSG00005009276 ENSOTSG00005001354 ndufa10 (ENSOTSG00005026790) ENSOTSG00005026789 ENSOTSG00005026787 ENSOTSG00005026786 ENSOTSG00005026785 ENSOTSG00005026784 ENSOTSG00005026783 agpat3 (ENSOTSG00005026782) Rainbow trout MODERN SPECIES 21 RAB3GAP1 (ENSOMYG00000010724) R3HDM1 (ENSOMYG00000006736) #37 UBXN4 (ENSOMYG00000006585) #36 ENSOMYG00000006412 ENSOMYG00000006220 RND3 (ENSOMYG00000006168) #11 rnd3b (ENSOMYG00000006108) #11 MMADHC (ENSOMYG00000006042) #13 LYPD6 (ENSOMYG00000005970) #14 lypd6b (ENSOMYG00000005960) #15 KIF5C (ENSOMYG00000005533) #16 epc2 (ENSOMYG00000004870) #18 MBD5 (ENSOMYG00000004808) #19 acvr2aa (ENSOMYG00000004736) #21 ENSOMYG00000030635 zeb2a (ENSOMYG00000004579) ##22 gtdc1 (ENSOMYG00000004521) #23 arhgap15 (ENSOMYG00000004463) #24 ENSOMYG00000077737 ENSOMYG00000004346 ENSOMYG00000062109 ENSOMYG00000073609 ENSOMYG00000004236 sh3bp4 (ENSOMYG00000004214) ENSOMYG00000002718 ENSOMYG00000000840 ndufa10 (ENSOMYG00000000339) ENSOMYG00000000270 ENSOMYG00000060709 ENSOMYG00000042842 ENSOMYG00000068390 Huchen MODERN SPECIES 87 zeb2a (ENSHHUG00000038427) ##22 gtdc1 (ENSHHUG00000038465) #23 arhgap15 (ENSHHUG00000038482) #24 ADPRH (ENSHHUG00000038499) ARL4C (ENSHHUG00000038510) sh3bp4 (ENSHHUG00000038514) ENSHHUG00000038539 ENSHHUG00000038813 gypc (ENSHHUG00000039177) ENSHHUG00000039200 ndufa10 (ENSHHUG00000039202) ENSHHUG00000039225 ENSHHUG00000039350 ENSHHUG00000039354 Salmoninae ANCESTRAL SPECIES 823 ENSGT00940000157541.f.d.d #11 ENSGT00390000015050.`b.a.f #13 ENSGT00390000000220.B.c.b.b #14 ENSGT00390000000220.A.d #15 ENSGT00940000158539.a.f #16 ENSGT00940000158526.t #18 ENSGT00530000064137.a.b.u.b #19 ENSGT00940000157233.d.h #21 ENSGT00950000183208.A.c.b.f ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000155759.e.a.a ENSGT00390000006705.h ENSGT00940000156095.m.b.b #37 ENSGT00940000160205.d #36 ENSGT00940000165390.a.l ENSGT00940000154311.b ENSGT00530000063686.a.a #9 ENSGT00940000157541.f.c.a #11 ENSGT00940000157541.f.d.d #11 ENSGT00390000015050.`b.a.f #13 ENSGT00390000000220.B.c.b.b #14 ENSGT00390000000220.A.d #15 ENSGT00940000158526.t #18 ENSGT00530000064137.a.b.u.b #19 ENSGT00940000157233.d.h #21 ENSGT00950000183208.A.c.b.f ##22 ENSGT00950000182860.a.b.b.d #24 ENSGT00940000166921.a ENSGT00940000160639.b.a.b.b.b.b ENSGT00390000013151.a.a.b.d ENSGT00530000065251.m.a ENSGT00940000160532.h.d.b ENSGT00950000182977.B.b.b.d ENSGT00940000160532.h.d.a ENSGT00510000049102.c ENSGT00390000016151.h ENSGT00940000154486.b.a.a.b.e.a.a.a.c ENSGT00940000154486.b.b.a.b.a ENSGT01100000263531.G.n ENSGT00950000182836.b.b.b.a.k.b ENSGT00390000003874.a.a.a Salmo ANCESTRAL SPECIES 10 ENSGT00940000155759.e.a.a ENSGT00390000006705.h ENSGT00940000156095.m.b.b #37 ENSGT00940000160205.d #36 ENSGT00940000165390.a.l ENSGT00940000154311.b ENSGT00530000063686.a.a #9 ENSGT00940000157541.f.c.a #11 ENSGT00940000157541.f.d.d #11 ENSGT00390000015050.`b.a.f #13 ENSGT00390000000220.B.c.b.b #14 ENSGT00390000000220.A.d #15 ENSGT00940000158526.t #18 ENSGT00530000064137.a.b.u.b #19 ENSGT00940000157233.d.h #21 ENSGT00950000183208.A.c.b.f ##22 ENSGT00950000182860.a.b.b.d #24 ENSGT00940000166921.a ENSGT00940000160639.b.a.b.b.b.b ENSGT00390000013151.a.a.b.d ENSGT00530000065251.m.a ENSGT00940000160532.h.d.b ENSGT00950000182977.B.b.b.d ENSGT00940000160532.h.d.a ENSGT00390000016151.h ENSGT00940000154486.b.b.a.a ENSGT00990000212594 ENSGT01100000263531.G.n ENSGT00950000182836.b.b.b.a.k.b ENSGT00390000003874.a.a.a ENSGT01050000244897.a.b.b.a.a.e Atlantic salmon MODERN SPECIES 13 RAB3GAP1 (ENSSSAG00000057384) ENSSSAG00000086017 r3hdm1 (ENSSSAG00000057435) #37 ubxn4 (ENSSSAG00000081673) #36 ENSSSAG00000057802 ENSSSAG00000057832 #9 RND3 (ENSSSAG00000057846) #11 rnd3b (ENSSSAG00000057861) #11 MMADHC (ENSSSAG00000057873) #13 LYPD6 (ENSSSAG00000057885) #14 LYPD6B (ENSSSAG00000117020) #15 epc2 (ENSSSAG00000057918) #18 ENSSSAG00000058136 #19 ACVR2A (ENSSSAG00000058221) #21 ENSSSAG00000116492 zeb2a (ENSSSAG00000063282) ##22 ENSSSAG00000104017 ENSSSAG00000121595 ENSSSAG00000097835 rhg15 (ENSSSAG00000063302) #24 ENSSSAG00000063341 ENSSSAG00000114450 ENSSSAG00000063499 ENSSSAG00000114515 ENSSSAG00000063519 ENSSSAG00000063572 clm8 (ENSSSAG00000064734) ENSSSAG00000064864 ENSSSAG00000113592 ENSSSAG00000109411 NDUAA (ENSSSAG00000067928) River trout MODERN SPECIES 12 ENSSTUG00000008815 rab3gap1 (ENSSTUG00000008774) R3HDM1 (ENSSTUG00000008585) #37 UBXN4 (ENSSTUG00000008518) #36 ENSSTUG00000008509 ENSSTUG00000008483 ENSSTUG00000008475 #9 rnd3b (ENSSTUG00000008458) #11 rnd3b (ENSSTUG00000008422) #11 mmadhcb (ENSSTUG00000008410) #13 LYPD6 (ENSSTUG00000008403) #14 lypd6b (ENSSTUG00000008381) #15 epc2 (ENSSTUG00000008327) #18 ENSSTUG00000008313 #19 acvr2aa (ENSSTUG00000007939) #21 zeb2a (ENSSTUG00000007798) ##22 arhgap15 (ENSSTUG00000007723) #24 ENSSTUG00000007661 ARL4C (ENSSTUG00000007658) ENSSTUG00000007651 sh3bp4 (ENSSTUG00000007637) ENSSTUG00000007626 ENSSTUG00000007613 ENSSTUG00000005465 ENSSTUG00000005317 ENSSTUG00000005306 ENSSTUG00000004869 ndufa10 (ENSSTUG00000004793) ENSSTUG00000004780 ENSSTUG00000004201 ENSSTUG00000004131 Oncorhynchus ANCESTRAL SPECIES 13 ENSGT00490000043417.f ENSGT00940000155759.e.a.a ENSGT00390000006705.h ENSGT00940000156095.m.b.b #37 ENSGT00940000160205.d #36 ENSGT00940000165390.a.l ENSGT00530000063686.a.a #9 ENSGT00940000157541.f.c.a #11 ENSGT00940000157541.f.d.d #11 ENSGT00390000015050.`b.a.f #13 ENSGT00390000000220.B.c.b.b #14 ENSGT00390000000220.A.d #15 ENSGT00940000158526.t #18 ENSGT00530000064137.a.b.u.b #19 ENSGT00940000157233.d.h #21 ENSGT00950000183208.A.c.b.f ##22 ENSGT00950000182860.a.b.b.d #24 ENSGT00940000166921.a ENSGT00940000160639.b.a.b.b.b.b.c ENSGT00940000160639.b.a.b.b.b.b.d ENSGT00390000013151.a.a.b.d ENSGT00530000065251.m.a ENSGT00940000160532.h.d.b ENSGT00950000182977.B.b.b.d ENSGT00940000160532.h.d.a ENSGT00510000049102.c ENSGT00390000016151.h ENSGT00940000153510.a.a.b ENSGT00940000154486.b.a.a.b.e.a.a.a.c ENSGT00940000154486.b.b.a.b.a ENSGT01100000263531.G.n Oncorhynchus_a ANCESTRAL SPECIES 11 ENSGT00390000001170.a.a.d.b.a ENSGT00490000043417.f ENSGT00940000155759.e.a.a ENSGT00940000156095.m.b.b #37 ENSGT00940000160205.d #36 ENSGT00940000165390.a.l ENSGT00530000063686.a.a #9 ENSGT00940000157541.f.c.a #11 ENSGT00940000157541.f.d.d #11 ENSGT00390000015050.`b.a.f #13 ENSGT00390000000220.B.c.b.b #14 ENSGT00390000000220.A.d #15 ENSGT00940000158526.t #18 ENSGT00530000064137.a.b.u.b #19 ENSGT00940000157233.d.h #21 ENSGT00950000183208.A.c.b.f ##22 ENSGT00950000182860.a.b.b.d #24 ENSGT00940000166921.a ENSGT00940000160639.b.a.b.b.b.b.c ENSGT00940000160639.b.a.b.b.b.b.d ENSGT00390000013151.a.a.b.d ENSGT00390000015709.c ENSGT00940000156180.e.f ENSGT00390000001225.t.b ENSGT00390000005581.a.f ENSGT01050000244905.A.a.n.a.a ENSGT00940000167649.a ENSGT01050000244905.A.a.n.b ENSGT00390000010463.a.b.c.a.f ENSGT00940000165672.r ENSGT00390000006330.a.a.b.c Chinook salmon MODERN SPECIES 18 R3HDM1 (ENSOTSG00005016395) #37 UBXN4 (ENSOTSG00005016473) #36 ENSOTSG00005016515 NMI (ENSOTSG00005016516) #9 RND3 (ENSOTSG00005016521) #11 rnd3b (ENSOTSG00005016522) #11 mmadhcb (ENSOTSG00005016523) #13 LYPD6 (ENSOTSG00005016524) #14 lypd6b (ENSOTSG00005016525) #15 ENSOTSG00005016567 epc2 (ENSOTSG00005016572) #18 ENSOTSG00005016802 #19 acvr2aa (ENSOTSG00005016807) #21 ENSOTSG00005016852 ENSOTSG00005016853 zeb2a (ENSOTSG00005016854) ##22 arhgap15 (ENSOTSG00005016855) #24 ENSOTSG00005016858 ARL4C (ENSOTSG00005017066) ARL4C (ENSOTSG00005017067) SH3BP4 (ENSOTSG00005017069) ENSOTSG00005017071 ENSOTSG00005017072 ENSOTSG00005017073 CNTNAP5 (ENSOTSG00005017074) ENSOTSG00005017085 ENSOTSG00005017086 ENSOTSG00005017089 ENSOTSG00005017091 ENSOTSG00005017093 ENSOTSG00005017094 Coho salmon MODERN SPECIES 18 acmsd (ENSOKIG00005026186) ccnt2a (ENSOKIG00005026326) R3HDM1 (ENSOKIG00005027587) #37 UBXN4 (ENSOKIG00005027938) #36 ENSOKIG00005028009 NMI (ENSOKIG00005028048) #9 RND3 (ENSOKIG00005028077) #11 rnd3b (ENSOKIG00005028093) #11 MMADHC (ENSOKIG00005028095) #13 LYPD6 (ENSOKIG00005028106) #14 lypd6b (ENSOKIG00005028112) #15 epc2 (ENSOKIG00005028162) #18 ENSOKIG00005029006 #19 acvr2aa (ENSOKIG00005029043) #21 ENSOKIG00005029214 zeb2a (ENSOKIG00005029225) ##22 ENSOKIG00005029292 ENSOKIG00005029303 arhgap15 (ENSOKIG00005029335) #24 ENSOKIG00005029400 ENSOKIG00005029416 ARL4C (ENSOKIG00005029427) ENSOKIG00005029435 SH3BP4 (ENSOKIG00005029441) ENSOKIG00005006226 ENSOKIG00005006239 CNTNAP5 (ENSOKIG00005006419) ENSOKIG00005009080 ENSOKIG00005009095 CNTNAP5 (ENSOKIG00005009128) gypc (ENSOKIG00005009358) Rainbow trout MODERN SPECIES 14 ENSOMYG00000024209 ENSOMYG00000024282 NMI (ENSOMYG00000024338) #9 RND3 (ENSOMYG00000024351) #11 rnd3b (ENSOMYG00000024432) #11 MMADHC (ENSOMYG00000024468) #13 LYPD6 (ENSOMYG00000024481) #14 LYPD6B (ENSOMYG00000024505) #15 ENSOMYG00000048707 epc2 (ENSOMYG00000024755) #18 ENSOMYG00000025244 ENSOMYG00000025274 #19 acvr2aa (ENSOMYG00000025406) #21 ENSOMYG00000072394 ENSOMYG00000060224 zeb2a (ENSOMYG00000025728) ##22 arhgap15 (ENSOMYG00000025805) #24 ENSOMYG00000068933 ENSOMYG00000025873 ENSOMYG00000068371 ENSOMYG00000025966 ENSOMYG00000025984 ENSOMYG00000026003 ENSOMYG00000026010 ENSOMYG00000026237 ENSOMYG00000069785 ENSOMYG00000051381 ENSOMYG00000027150 ENSOMYG00000069429 ENSOMYG00000017512 ENSOMYG00000049274 Huchen MODERN SPECIES 2021 zeb2a (ENSHHUG00000026143) ##22 Northern pike MODERN SPECIES 15 ENSELUG00000004966 rab3gap1 (ENSELUG00000004956) R3HDM1 (ENSELUG00000004909) #37 UBXN4 (ENSELUG00000004855) #36 ENSELUG00000004826 ENSELUG00000004778 #9 rnd3b (ENSELUG00000004762) #11 rnd3b (ENSELUG00000004752) #11 mmadhcb (ENSELUG00000004743) #13 LYPD6 (ENSELUG00000025460) #14 lypd6b (ENSELUG00000004706) #15 KIF5C (ENSELUG00000004683) #16 epc2 (ENSELUG00000004633) #18 MBD5 (ENSELUG00000004605) #19 acvr2aa (ENSELUG00000004570) #21 zeb2a (ENSELUG00000004545) ##22 ENSELUG00000027327 gtdc1 (ENSELUG00000004515) #23 arhgap15 (ENSELUG00000004474) #24 ADPRH (ENSELUG00000004422) ARL4C (ENSELUG00000004400) sh3bp4 (ENSELUG00000004382) ENSELUG00000004356 ENSELUG00000004224 CNTNAP5 (ENSELUG00000003908) ndufa10 (ENSELUG00000003853) ENSELUG00000003796 agpat3 (ENSELUG00000003749) pdxka (ENSELUG00000003730) ENSELUG00000028423 TMPRSS3 (ENSELUG00000003710) Gnathostomata ANCESTRAL SPECIES 1028 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 Elephant shark MODERN SPECIES 1733 ENSCMIG00000018612 shmt2 (ENSCMIG00000018662) NXPH4 (ENSCMIG00000018759) ##27 LRP1 (ENSCMIG00000018861) ENSCMIG00000018975 ##22 ENSCMIG00000018979 ##24 mars1 (ENSCMIG00000018983) ENSCMIG00000018987 ENSCMIG00000018988 #19 ENSCMIG00000018989 dctn2 (ENSCMIG00000019008) ENSCMIG00000019072 pip4k2ca (ENSCMIG00000019079) Euteleostomi ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Amniota ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Sauria ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Archelosauria ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Cryptodira ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Testudinoidea ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Emydidae ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Three-toed box turtle MODERN SPECIES 2425 ENSTMTG00000015492 ##22 Coelacanth MODERN SPECIES 224 naca (ENSLACG00000018689) PRIM1 (ENSLACG00000018692) PAN2 (ENSLACG00000018694) INPP1 (ENSLACG00000018703) DNAJC14 (ENSLACG00000018708) ORMDL2 (ENSLACG00000018715) SARNP (ENSLACG00000018719) gdf11 (ENSLACG00000018739) RDH16 (ENSLACG00000018767) gpr182 (ENSLACG00000018770) GPR182 (ENSLACG00000018771) ZBTB39 (ENSLACG00000018773) ENSLACG00000018787 NEMP1 (ENSLACG00000022538) NAB2 (ENSLACG00000018800) ENSLACG00000018829 ##22 ARHGAP9 (ENSLACG00000018841) ##24 MARS1 (ENSLACG00000018854) DDIT3 (ENSLACG00000018860) ATF1 (ENSLACG00000018861) ENSLACG00000018868 METTL7A (ENSLACG00000018882) SCN8A (ENSLACG00000018890) FIGNL2 (ENSLACG00000018930) SLC4A8 (ENSLACG00000018933) GALNT6 (ENSLACG00000018944) ENSLACG00000018947 CELA1 (ENSLACG00000018953) BIN2 (ENSLACG00000018956) PMEL (ENSLACG00000018957) CDK2 (ENSLACG00000018959) Actinopterygii ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Neopterygii ANCESTRAL SPECIES 117 ENSGT00390000012629 ENSGT01050000244890.a.b.b ENSGT00940000155489.b ENSGT00940000155250 ENSGT01090000260051.b.a.a.a ENSGT00940000155460 ENSGT00940000157899.b ENSGT00950000182883.b.a.b ##27 ENSGT00390000002762.a.a ENSGT00940000161040 ENSGT00950000183092.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00530000064137.a.a ##19 ENSGT00390000003427 ENSGT00940000159439 ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000160763 ENSGT00940000157748 ENSGT00940000155850 ENSGT00940000161293 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 Spotted gar MODERN SPECIES 670 rarga (ENSLOCG00000006240) nr1d4b (ENSLOCG00000006223) mfsd5 (ENSLOCG00000018206) FAIM2 (ENSLOCG00000006201) ENSLOCG00000006182 rbms2b (ENSLOCG00000006148) ENSLOCG00000006126 LRP1 (ENSLOCG00000006089) NXPH4 (ENSLOCG00000006080) ##27 shmt2 (ENSLOCG00000006059) NDUFA4L2 (ENSLOCG00000006035) stac3 (ENSLOCG00000005998) R3HDM2 (ENSLOCG00000005976) INHBC (ENSLOCG00000005963) gli1 (ENSLOCG00000005938) ENSLOCG00000005919 ##22 ARHGAP9 (ENSLOCG00000005905) ##24 ENSLOCG00000005882 ddit3 (ENSLOCG00000005864) ENSLOCG00000005853 dctn2 (ENSLOCG00000005825) kif5aa (ENSLOCG00000005807) soat2 (ENSLOCG00000005783) igsf8 (ENSLOCG00000005749) ENSLOCG00000005735 tarbp2 (ENSLOCG00000005711) ENSLOCG00000005691 sp7 (ENSLOCG00000005679) ENSLOCG00000018204 sp1 (ENSLOCG00000005658) ENSLOCG00000005638 Osteoglossocephalai ANCESTRAL SPECIES 1 ENSGT00940000159809 ENSGT00940000167348 ENSGT00950000182810.A.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000171242 ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00530000064137.a.a ##19 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT01060000252161 Clupeocephala ANCESTRAL SPECIES 7 ENSGT00950000182810.A.a.a.b ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00530000064137.a.a ##19 ENSGT00390000003427 ENSGT00940000159439.b ENSGT01030000234815 ENSGT01090000259987.a.b.c ENSGT00940000155003.e.a ENSGT00940000154801 ENSGT00950000182860.a.a.b.a.b ##24 ENSGT00950000183208.B.f.a ##22 ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 Otomorpha ANCESTRAL SPECIES 89 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.c ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00530000064137.a.a ##19 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000160885 ENSGT01060000252161 ENSGT00940000154129.gd Clupeiformes ANCESTRAL SPECIES 72 ENSGT00390000014429.a ENSGT00940000156378.a.a ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.c ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00530000064137.a.a ##19 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000160885 ENSGT00940000154129.gd ENSGT00940000159006.c.a Atlantic herring MODERN SPECIES 21 FAM107A (ENSCHAG00000009493) ccdc3b (ENSCHAG00000009526) CAMK1 (ENSCHAG00000009558) prelid3b (ENSCHAG00000009883) aurka (ENSCHAG00000009943) slc32a1 (ENSCHAG00000010318) ARHGAP40 (ENSCHAG00000010341) PPP1R16B (ENSCHAG00000010420) fam210b (ENSCHAG00000010506) ENSCHAG00000010521 shmt2 (ENSCHAG00000010569) STAC3 (ENSCHAG00000012579) R3HDM2 (ENSCHAG00000012793) INHBC (ENSCHAG00000014032) gli1 (ENSCHAG00000014040) ENSCHAG00000014050 ##22 ARHGAP9 (ENSCHAG00000014062) ##24 mars1 (ENSCHAG00000014303) ddit3 (ENSCHAG00000017490) ENSCHAG00000017499 ##19 dctn2 (ENSCHAG00000017516) KIF5A (ENSCHAG00000017864) ENSCHAG00000021053 soat2 (ENSCHAG00000021074) igsf8 (ENSCHAG00000021302) sp7 (ENSCHAG00000021305) tarbp2 (ENSCHAG00000021309) LRP1 (ENSCHAG00000021367) ENSCHAG00000022356 nuf2 (ENSCHAG00000022403) rab43 (ENSCHAG00000022422) Denticle herring MODERN SPECIES 3 CAMK1 (ENSDCDG00000034765) prelid3b (ENSDCDG00000034757) aurka (ENSDCDG00000034756) slc32a1 (ENSDCDG00000034755) ARHGAP40 (ENSDCDG00000034753) PPP1R16B (ENSDCDG00000034751) fam210b (ENSDCDG00000034750) NDUFA4L2 (ENSDCDG00000034749) shmt2 (ENSDCDG00000034339) NXPH4 (ENSDCDG00000034291) ##27 STAC3 (ENSDCDG00000034285) R3HDM2 (ENSDCDG00000034227) INHBC (ENSDCDG00000034210) gli1 (ENSDCDG00000034209) ENSDCDG00000034205 ENSDCDG00000034204 ##22 ARHGAP9 (ENSDCDG00000034201) ##24 mars1 (ENSDCDG00000034102) ddit3 (ENSDCDG00000034074) ENSDCDG00000034072 ##19 dctn2 (ENSDCDG00000034020) ENSDCDG00000034007 KIF5A (ENSDCDG00000032977) soat2 (ENSDCDG00000032935) igsf8 (ENSDCDG00000032932) sp7 (ENSDCDG00000032929) tarbp2 (ENSDCDG00000032927) ENSDCDG00000032921 sp1 (ENSDCDG00000032919) AMHR2 (ENSDCDG00000032912) PCBP2 (ENSDCDG00000032895) Euteleosteomorpha ANCESTRAL SPECIES 5 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00940000154129.gd ENSGT00940000159006.c.a Protacanthopterygii ANCESTRAL SPECIES 98 ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00970000198185 ENSGT00940000154129.gd.a.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 202 ENSGT00940000155325.a.b.a.c.a ENSGT00940000155851.c.b ENSGT00390000000911.h.b.i ENSGT01050000244971.A.d.a.a ENSGT00390000004940.a.b.o.b ENSGT00940000154417.d.g ENSGT00490000043380.a.i ENSGT00940000162174.d ENSGT00940000154090.b.f.a ENSGT00940000156134.p ENSGT00390000002762.a.a.b.a.d ENSGT00950000182883.b.a.b.a.g ##27 ENSGT00940000155609.k.a.a ENSGT00940000160065.g ENSGT00940000160235.g.a ENSGT00950000183208.A.d.a ##22 ENSGT00950000182860.a.b.a.e ##24 ENSGT00390000006305.m ENSGT00390000003427.a.a ENSGT00940000159439.b.a ENSGT00940000161293.c ENSGT00940000160763.g ENSGT00940000154129.gd.a.a ENSGT00940000159006.c.a.a Huchen MODERN SPECIES 3506 ENSHHUG00000020094 ENSHHUG00000020104 ENSHHUG00000020108 ##22 Salmoninae_a ANCESTRAL SPECIES 25 ENSGT00940000155851.c.b ENSGT00390000000911.h.b.i ENSGT01050000244971.A.d.a.a ENSGT01010000223025.b ENSGT00390000004940.a.b.o.b ENSGT00940000154417.d.g ENSGT00490000043380.a.i ENSGT00940000162174.d ENSGT00940000154090.b.f.a ENSGT00940000156134.p ENSGT00390000002762.a.a.b.a.d ENSGT00950000182883.b.a.b.a.g ##27 ENSGT00940000155609.k.a.a ENSGT00940000160065.g ENSGT00940000160235.g.a ENSGT00950000183208.A.d.a ##22 ENSGT00950000182860.a.b.a.e ##24 ENSGT00390000006305.m ENSGT00390000003427.a.a ENSGT00940000159439.b.a ENSGT00940000161293.c ENSGT00940000160763.g ENSGT00940000154129.gd.a.a ENSGT00940000159006.c.a.a ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.z.b ENSGT00940000154697.a.b.xb ENSGT00940000165514.g ENSGT00940000154984.B ENSGT00940000160096 Oncorhynchus ANCESTRAL SPECIES 5 ENSGT00940000155851.c.b ENSGT00390000000911.h.b.i ENSGT01050000244971.A.d.a.a.a ENSGT00390000004940.a.b.o.b ENSGT01010000223025.b ENSGT00940000154417.d.g ENSGT00490000043380.a.i ENSGT00940000162174.d ENSGT00940000154090.b.f.a ENSGT00940000156134.p ENSGT01010000229889 ENSGT00950000182883.b.a.b.a.g ##27 ENSGT00940000155609.k.a.a ENSGT00940000160065.g ENSGT00940000160235.g.a ENSGT00950000183208.A.d.a ##22 ENSGT00950000182860.a.b.a.e ##24 ENSGT00390000006305.m ENSGT00390000003427.a.a ENSGT00940000159439.b.a ENSGT00940000161293.c ENSGT00940000160763.g ENSGT00940000157804.p ENSGT00940000154129.gd.a.a ENSGT00940000159006.c.a.a ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.z.b ENSGT00940000154697.a.b.xb ENSGT00940000165514.g ENSGT00940000154984.B Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT00940000155851.c.b ENSGT00390000000911.h.b.i ENSGT01050000244971.A.d.a.a.a ENSGT00390000004940.a.b.o.b ENSGT01010000223025.b ENSGT00940000154417.d.g ENSGT00490000043380.a.i ENSGT00940000162174.d ENSGT00940000154090.b.f.a ENSGT00940000156134.p ENSGT01010000229889 ENSGT00950000182883.b.a.b.a.g ##27 ENSGT00940000155609.k.a.a ENSGT00940000160065.g ENSGT00940000160235.g.a ENSGT00950000183208.A.d.a ##22 ENSGT00950000182860.a.b.a.e ##24 ENSGT00390000006305.m ENSGT00390000003427.a.a ENSGT00940000159439.b.a ENSGT00940000161293.c ENSGT00940000160763.g ENSGT00940000157804.p ENSGT00940000154129.gd.a.a ENSGT00940000159006.c.a.a ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.z.b ENSGT00940000154697.a.b.xb ENSGT00940000165514.g ENSGT00940000154984.B Coho salmon MODERN SPECIES 25 ENSOKIG00005000231 camk2n1 (ENSOKIG00005000210) ENSOKIG00005000205 ENSOKIG00005000200 ddx19b (ENSOKIG00005000187) SLC32A1 (ENSOKIG00005000179) ENSOKIG00005000159 PPP1R16B (ENSOKIG00005000113) ENSOKIG00005000056 ENSOKIG00005000043 NXPH4 (ENSOKIG00005000023) ##27 ENSOKIG00005000010 R3HDM2 (ENSOKIG00005032208) INHBC (ENSOKIG00005032179) gli1 (ENSOKIG00005032090) ENSOKIG00005032066 ##22 ARHGAP9 (ENSOKIG00005031927) ##24 ddit3 (ENSOKIG00005031895) dctn2 (ENSOKIG00005031094) ENSOKIG00005031017 KIF5A (ENSOKIG00005030690) SP7 (ENSOKIG00005030626) ENSOKIG00005030583 ENSOKIG00005030565 PCBP2 (ENSOKIG00005030528) MAP3K12 (ENSOKIG00005029888) ENSOKIG00005029851 RIMS4 (ENSOKIG00005029828) YWHAB (ENSOKIG00005029741) tomm34 (ENSOKIG00005029718) cox6c (ENSOKIG00005029702) Chinook salmon MODERN SPECIES 31 mapk14b (ENSOTSG00005029649) DNAJC16 (ENSOTSG00005029528) cdab (ENSOTSG00005029527) ENSOTSG00005029525 camk2n1 (ENSOTSG00005029524) ENSOTSG00005029522 ddx19b (ENSOTSG00005029464) slc32a1 (ENSOTSG00005029457) ARHGAP40 (ENSOTSG00005029456) PPP1R16B (ENSOTSG00005029443) ENSOTSG00005029440 NXPH4 (ENSOTSG00005029437) ##27 R3HDM2 (ENSOTSG00005028531) INHBC (ENSOTSG00005028520) gli1 (ENSOTSG00005028515) ENSOTSG00005028513 ##22 ARHGAP9 (ENSOTSG00005028424) ##24 ddit3 (ENSOTSG00005028420) dctn2 (ENSOTSG00005028365) KIF5A (ENSOTSG00005028355) sp7 (ENSOTSG00005028351) ENSOTSG00005028350 PCBP2 (ENSOTSG00005028349) MAP3K12 (ENSOTSG00005028346) ENSOTSG00005028345 RIMS4 (ENSOTSG00005028344) YWHAB (ENSOTSG00005028342) tomm34 (ENSOTSG00005028341) cox6c (ENSOTSG00005028340) ENSOTSG00005026299 KCNS1 (ENSOTSG00005026293) Rainbow trout MODERN SPECIES 28 ENSOMYG00000023376 camk2n1 (ENSOMYG00000023367) ENSOMYG00000023352 ddx19b (ENSOMYG00000023284) ENSOMYG00000069626 ENSOMYG00000023234 ENSOMYG00000023176 ENSOMYG00000022989 ENSOMYG00000022867 ENSOMYG00000022828 ENSOMYG00000022797 ##27 ENSOMYG00000051093 R3HDM2 (ENSOMYG00000021429) INHBC (ENSOMYG00000021098) gli1 (ENSOMYG00000021075) ENSOMYG00000021048 ##22 ENSOMYG00000021038 ARHGAP9 (ENSOMYG00000021030) ##24 ddit3 (ENSOMYG00000066053) dctn2 (ENSOMYG00000020113) ENSOMYG00000020033 KIF5A (ENSOMYG00000019804) ENSOMYG00000061411 ENSOMYG00000019713 ENSOMYG00000019703 ENSOMYG00000019672 ENSOMYG00000010474 ENSOMYG00000034159 ENSOMYG00000069204 ENSOMYG00000055788 ENSOMYG00000066236 Salmo ANCESTRAL SPECIES 6 ENSGT00940000155851.c.b ENSGT00390000000911.h.b.i ENSGT01050000244971.A.d.a.a ENSGT01010000223025.b ENSGT00390000004940.a.b.o.b ENSGT00940000154417.d.g ENSGT00490000043380.a.i ENSGT00940000162174.d ENSGT00940000154090.b.f.a ENSGT00940000156134.p ENSGT00390000002762.a.a.b.a.d ENSGT00950000182883.b.a.b.a.g ##27 ENSGT00940000155609.k.a.a ENSGT00940000160065.g ENSGT00940000160235.g.a ENSGT00950000183208.A.d.a ##22 ENSGT00950000182860.a.b.a.e ##24 ENSGT00390000006305.m ENSGT00390000003427.a.a ENSGT00940000159439.b.a ENSGT00940000161293.c ENSGT00940000160763.g ENSGT00940000154129.gd.a.a ENSGT00940000159006.c.a.a ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.z.b ENSGT00940000154697.a.b.xb ENSGT00940000165514.g ENSGT00940000154984.B ENSGT00940000160096 Atlantic salmon MODERN SPECIES 14 ENSSSAG00000066858 cdd (ENSSSAG00000066839) ENSSSAG00000066837 ENSSSAG00000066832 ENSSSAG00000066715 ENSSSAG00000100803 ENSSSAG00000066689 ENSSSAG00000094656 ppp1r16b (ENSSSAG00000066102) fam210b (ENSSSAG00000066096) shmt2 (ENSSSAG00000066094) ENSSSAG00000082070 ##27 R3HDM2 (ENSSSAG00000064420) INHBC (ENSSSAG00000090732) gli1 (ENSSSAG00000064356) ENSSSAG00000064348 ##22 RHG15 (ENSSSAG00000064319) ##24 ENSSSAG00000109066 ENSSSAG00000122184 ENSSSAG00000093872 ddit3 (ENSSSAG00000103408) DCTN2 (ENSSSAG00000063429) KIF5A (ENSSSAG00000053327) ENSSSAG00000053099 ENSSSAG00000053096 ENSSSAG00000053031 ENSSSAG00000050832 ENSSSAG00000050804 ENSSSAG00000089084 ENSSSAG00000050790 tomm34 (ENSSSAG00000050785) Salmoninae ANCESTRAL SPECIES 101 ENSGT01010000223025 ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a.j ENSGT00940000162174.c ENSGT00940000154090.b.f.b ENSGT00940000156134.o ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.c ENSGT00950000182883.b.a.b.a.h ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k.a.b ENSGT00940000160065.h ENSGT00940000160235.g.b ENSGT00950000183208.A.d.b ##22 ENSGT00950000182860.a.b.a.f ##24 ENSGT00550000075017.f ENSGT00550000075017.e.a ENSGT00390000006305.n ENSGT00390000003427.a.b ENSGT00940000159439.b.b ENSGT00950000183081.a.a.b ENSGT00990000205462.b ENSGT00940000161314 ENSGT00940000161293.d ENSGT00940000157748 ENSGT00940000160763.h ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 Salmoninae_a ANCESTRAL SPECIES 29 ENSGT00940000154417.d.h ENSGT01010000223025.a ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a.j ENSGT00940000162174.c ENSGT00940000154090.b.f.b ENSGT00940000156134.o ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.c ENSGT00950000182883.b.a.b.a.h ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k.a.b ENSGT00940000160065.h ENSGT00940000160235.g.b ENSGT00950000183208.A.d.b ##22 ENSGT00950000182860.a.b.a.f ##24 ENSGT00550000075017.f ENSGT00390000006305.n ENSGT00390000003427.a.b ENSGT00940000159439.b.b ENSGT00950000183081.a.a.b ENSGT00990000205462.b ENSGT00940000161314 ENSGT00940000161293.d ENSGT00940000157748 ENSGT00940000160763.h ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00970000198185 Salmo DUPLICATION Salmo ANCESTRAL SPECIES 33 ENSGT00940000154417.d.h ENSGT01010000223025.a ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a.j ENSGT00940000162174.c ENSGT00940000154090.b.f.b ENSGT00940000156134.o ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.c ENSGT00950000182883.b.a.b.a.h ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k.a.b ENSGT00940000160065.h ENSGT00940000160235.g.b ENSGT00950000183208.A.d.b.a ##22 ENSGT00950000182860.a.b.a.f ##24 ENSGT00550000075017.e.a ENSGT00390000006305.n ENSGT00390000003427.a.b ENSGT00940000159439.b.b ENSGT00950000183081.a.a.b ENSGT00990000205462.b ENSGT00940000161314 ENSGT00940000161293.d ENSGT00940000157748 ENSGT00940000160763.h ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00970000198185 River trout MODERN SPECIES 5 ENSSTUG00000009909 ENSSTUG00000009899 ddx19b (ENSSTUG00000009179) prelid3b (ENSSTUG00000009088) aurka (ENSSTUG00000009070) slc32a1 (ENSSTUG00000009050) ARHGAP40 (ENSSTUG00000009023) PPP1R16B (ENSSTUG00000008935) fam210b (ENSSTUG00000008899) ENSSTUG00000008885 shmt2 (ENSSTUG00000008201) STAC3 (ENSSTUG00000008055) R3HDM2 (ENSSTUG00000006166) INHBC (ENSSTUG00000006022) gli1 (ENSSTUG00000006004) ENSSTUG00000005974 ##22 ARHGAP9 (ENSSTUG00000005929) ##24 ENSSTUG00000005898 ENSSTUG00000005888 ENSSTUG00000005882 ENSSTUG00000005876 ENSSTUG00000005874 ENSSTUG00000005869 KIF5A (ENSSTUG00000005729) soat2 (ENSSTUG00000005685) sp7 (ENSSTUG00000005662) tarbp2 (ENSSTUG00000005649) ENSSTUG00000005625 sp1 (ENSSTUG00000005612) ENSSTUG00000005605 ENSSTUG00000005588 Atlantic salmon MODERN SPECIES 3 ENSSSAG00000031016 ENSSSAG00000090594 ENSSSAG00000031237 ENSSSAG00000092320 ENSSSAG00000094059 ENSSSAG00000031772 fam210b (ENSSSAG00000093027) NDUFA4L2 (ENSSSAG00000120770) GLYM (ENSSSAG00000040078) NXPH4 (ENSSSAG00000045938) ##27 STAC3 (ENSSSAG00000045942) R3HDM2 (ENSSSAG00000045994) INHBC (ENSSSAG00000104549) gli1 (ENSSSAG00000046547) ENSSSAG00000046521 ENSSSAG00000046598 ##22 ARHGAP9 (ENSSSAG00000046609) ##24 mars1 (ENSSSAG00000046703) ENSSSAG00000101325 ddit3 (ENSSSAG00000106324) DCTN2 (ENSSSAG00000046757) KIF5A (ENSSSAG00000046870) ENSSSAG00000105805 soat2 (ENSSSAG00000054974) ENSSSAG00000091458 igsf8 (ENSSSAG00000090217) sp7 (ENSSSAG00000005832) tarbp2 (ENSSSAG00000005813) ENSSSAG00000005801 sp1 (ENSSSAG00000005792) ENSSSAG00000005784 Salmo ANCESTRAL SPECIES ENSGT00950000183208.A.d.b.b ##22 River trout MODERN SPECIES 7 DNAJC16 (ENSSTUG00000030079) cdab (ENSSTUG00000030408) ENSSTUG00000030414 camk2n1 (ENSSTUG00000030424) ddx19b (ENSSTUG00000030430) ENSSTUG00000030692 slc32a1 (ENSSTUG00000030703) ENSSTUG00000030723 PPP1R16B (ENSSTUG00000030736) ENSSTUG00000030798 ENSSTUG00000030803 NXPH4 (ENSSTUG00000030818) ##27 R3HDM2 (ENSSTUG00000029974) INHBC (ENSSTUG00000030462) gli1 (ENSSTUG00000030470) ENSSTUG00000030511 ##22 ARHGAP9 (ENSSTUG00000030522) ##24 ddit3 (ENSSTUG00000030619) dctn2 (ENSSTUG00000030644) KIF5A (ENSSTUG00000030857) ENSSTUG00000032354 sp7 (ENSSTUG00000032370) ENSSTUG00000032374 PCBP2 (ENSSTUG00000032405) MAP3K12 (ENSSTUG00000032545) ENSSTUG00000033463 RIMS4 (ENSSTUG00000033491) YWHAB (ENSSTUG00000033516) tomm34 (ENSSTUG00000033567) cox6c (ENSSTUG00000033586) ENSSTUG00000033646 Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00390000004940.a.b.o.a ENSGT00940000154417.d.h ENSGT01010000223025.a ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a.j ENSGT00940000162174.c ENSGT00940000154090.b.f.b ENSGT00940000156134.o ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.c ENSGT00950000182883.b.a.b.a.h ##27 ENSGT00940000160065.h ENSGT00940000155609.k.a.b ENSGT00940000160235.g.b ENSGT00950000183208.A.d.b ##22 ENSGT00950000182860.a.b.a.f ##24 ENSGT00550000075017.f ENSGT00390000006305.n ENSGT00390000003427.a.b ENSGT00940000159439.b.b ENSGT00950000183081.a.a.b ENSGT00990000205462.b ENSGT00940000161314 ENSGT00940000161293.d ENSGT00940000157748 ENSGT00940000160763.h ENSGT00940000157804.o ENSGT00940000167008 ENSGT00940000160885 ENSGT00970000198185 Oncorhynchus_a ANCESTRAL SPECIES 54 ENSGT00390000004940.a.b.o.a ENSGT00940000154417.d.h ENSGT01010000223025.a ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a.j ENSGT00940000162174.c ENSGT00940000154090.b.f.b ENSGT00940000156134.o ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.c ENSGT00950000182883.b.a.b.a.h ##27 ENSGT00940000160065.h ENSGT00940000155609.k.a.b ENSGT00940000160235.g.b ENSGT00950000183208.A.d.b ##22 ENSGT00950000182860.a.b.a.f ##24 ENSGT00550000075017.f ENSGT00390000006305.n ENSGT00390000003427.a.b ENSGT00940000159439.b.b ENSGT00950000183081.a.a.b ENSGT00990000205462.b ENSGT00940000161314 ENSGT00940000161293.d ENSGT00940000157748 ENSGT00940000160763.h ENSGT00940000157804.o ENSGT00940000167008 ENSGT00940000160885 ENSGT00970000198185 Coho salmon MODERN SPECIES prelid3b (ENSOKIG00005026798) aurka (ENSOKIG00005026781) slc32a1 (ENSOKIG00005026758) ARHGAP40 (ENSOKIG00005026743) ENSOKIG00005026729 PPP1R16B (ENSOKIG00005026717) fam210b (ENSOKIG00005026712) NDUFA4L2 (ENSOKIG00005026708) shmt2 (ENSOKIG00005026554) NXPH4 (ENSOKIG00005026535) ##27 ENSOKIG00005026530 ENSOKIG00005026523 R3HDM2 (ENSOKIG00005025940) ENSOKIG00005025861 gli1 (ENSOKIG00005025774) ENSOKIG00005025741 ##22 ARHGAP9 (ENSOKIG00005025693) ##24 mars1 (ENSOKIG00005025087) ENSOKIG00005025047 ddit3 (ENSOKIG00005025033) dctn2 (ENSOKIG00005024922) ENSOKIG00005024898 KIF5A (ENSOKIG00005023596) ENSOKIG00005023522 soat2 (ENSOKIG00005023472) sp7 (ENSOKIG00005023466) ENSOKIG00005023457 tarbp2 (ENSOKIG00005023447) ENSOKIG00005023433 SP1 (ENSOKIG00005023422) ENSOKIG00005023404 Chinook salmon MODERN SPECIES 1059 ENSOTSG00005041304 ##22 Rainbow trout MODERN SPECIES 8 ddx19b (ENSOMYG00000009954) ENSOMYG00000011277 ENSOMYG00000011297 ENSOMYG00000011329 ENSOMYG00000066952 ENSOMYG00000055935 fam210b (ENSOMYG00000011356) NDUFA4L2 (ENSOMYG00000074259) shmt2 (ENSOMYG00000011457) NXPH4 (ENSOMYG00000013213) ##27 ENSOMYG00000013220 ENSOMYG00000069248 ENSOMYG00000067800 ENSOMYG00000073355 GLI1 (ENSOMYG00000013255) ENSOMYG00000013334 ##22 ARHGAP9 (ENSOMYG00000013346) ##24 mars1 (ENSOMYG00000013360) ddit3 (ENSOMYG00000013405) dctn2 (ENSOMYG00000013443) KIF5A (ENSOMYG00000055988) ENSOMYG00000058930 soat2 (ENSOMYG00000013534) igsf8 (ENSOMYG00000030392) sp7 (ENSOMYG00000030402) ENSOMYG00000030432 ENSOMYG00000075823 SP1 (ENSOMYG00000030362) ENSOMYG00000030352 AMHR2 (ENSOMYG00000030326) ENSOMYG00000030312 Huchen MODERN SPECIES 4873 ENSHHUG00000013935 ENSHHUG00000013875 ##22 ENSHHUG00000013869 ##24 Northern pike MODERN SPECIES 16 ENSELUG00000028856 ENSELUG00000034488 aurka (ENSELUG00000019389) ENSELUG00000032646 slc32a1 (ENSELUG00000032744) ENSELUG00000019348 PPP1R16B (ENSELUG00000019307) fam210b (ENSELUG00000019248) NDUFA4L2 (ENSELUG00000019234) shmt2 (ENSELUG00000019224) NXPH4 (ENSELUG00000019200) ##27 STAC3 (ENSELUG00000015859) R3HDM2 (ENSELUG00000015969) INHBC (ENSELUG00000026593) gli1 (ENSELUG00000010164) ENSELUG00000010204 ##22 ARHGAP9 (ENSELUG00000010297) ##24 mars1 (ENSELUG00000010453) ddit3 (ENSELUG00000010496) dctn2 (ENSELUG00000010533) KIF5A (ENSELUG00000034150) soat2 (ENSELUG00000010574) igsf8 (ENSELUG00000010602) sp7 (ENSELUG00000025531) ENSELUG00000010623 tarbp2 (ENSELUG00000010642) ENSELUG00000010666 sp1 (ENSELUG00000010685) ENSELUG00000010697 AMHR2 (ENSELUG00000010715) ENSELUG00000026683 Acanthomorphata ANCESTRAL SPECIES 26 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00940000154129.gd ENSGT00940000159006.c.a Euacanthomorphacea ANCESTRAL SPECIES 1 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Percomorphaceae ANCESTRAL SPECIES 1 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Percomorphaceae_C ANCESTRAL SPECIES 1 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Percomorphaceae_D ANCESTRAL SPECIES 3 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Anabantaria ANCESTRAL SPECIES ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Anabantoidei ANCESTRAL SPECIES 1 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00940000154129.gd ENSGT00940000159006.c.a Climbing perch MODERN SPECIES 18 ENSATEG00000025036 prelid3b (ENSATEG00000025035) ENSATEG00000025034 slc32a1 (ENSATEG00000027089) ENSATEG00000025032 ENSATEG00000025030 fam210b (ENSATEG00000025029) NDUFA4L2 (ENSATEG00000025028) shmt2 (ENSATEG00000025027) NXPH4 (ENSATEG00000025026) ##27 STAC3 (ENSATEG00000025025) R3HDM2 (ENSATEG00000025024) ENSATEG00000028260 INHBC (ENSATEG00000025023) gli1 (ENSATEG00000025022) ENSATEG00000025021 ##22 ARHGAP9 (ENSATEG00000025020) ##24 ddit3 (ENSATEG00000029330) mars1 (ENSATEG00000025019) dctn2 (ENSATEG00000025017) ENSATEG00000025016 ENSATEG00000025015 igsf8 (ENSATEG00000025014) ENSATEG00000025013 ENSATEG00000025012 ENSATEG00000026871 SP1 (ENSATEG00000025010) ENSATEG00000025009 AMHR2 (ENSATEG00000025008) PCBP2 (ENSATEG00000025007) MAP3K12 (ENSATEG00000025006) Zig-zag eel MODERN SPECIES 19 ipo9 (ENSMAMG00000008798) ENSMAMG00000009479 prelid3b (ENSMAMG00000009500) ENSMAMG00000009517 slc32a1 (ENSMAMG00000009549) ENSMAMG00000009558 ENSMAMG00000009581 fam210b (ENSMAMG00000028164) NDUFA4L2 (ENSMAMG00000009667) shmt2 (ENSMAMG00000009686) NXPH4 (ENSMAMG00000009730) ##27 STAC3 (ENSMAMG00000009748) R3HDM2 (ENSMAMG00000009793) INHBC (ENSMAMG00000009832) gli1 (ENSMAMG00000009841) ENSMAMG00000009904 ##22 ARHGAP9 (ENSMAMG00000009917) ##24 mars1 (ENSMAMG00000010012) ddit3 (ENSMAMG00000028715) dctn2 (ENSMAMG00000010138) KIF5A (ENSMAMG00000010203) soat2 (ENSMAMG00000010240) igsf8 (ENSMAMG00000010247) ENSMAMG00000010257 ENSMAMG00000010272 ENSMAMG00000010311 SP1 (ENSMAMG00000010349) AMHR2 (ENSMAMG00000010373) ENSMAMG00000010397 PCBP2 (ENSMAMG00000010416) MAP3K12 (ENSMAMG00000010441) Carangaria ANCESTRAL SPECIES 3 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Pleuronectoidei ANCESTRAL SPECIES 4 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293.f ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Turbot MODERN SPECIES 18 ENSSMAG00000011773 ENSSMAG00000011813 prelid3b (ENSSMAG00000011815) ENSSMAG00000011833 slc32a1 (ENSSMAG00000031105) ENSSMAG00000011867 ENSSMAG00000011937 fam210b (ENSSMAG00000024290) NDUFA4L2 (ENSSMAG00000011983) shmt2 (ENSSMAG00000012014) NXPH4 (ENSSMAG00000012048) ##27 STAC3 (ENSSMAG00000012053) R3HDM2 (ENSSMAG00000012073) INHBC (ENSSMAG00000024860) gli1 (ENSSMAG00000012216) ENSSMAG00000028151 ##22 ARHGAP9 (ENSSMAG00000012272) ##24 mars1 (ENSSMAG00000012409) ddit3 (ENSSMAG00000012530) dctn2 (ENSSMAG00000012547) KIF5A (ENSSMAG00000012588) soat2 (ENSSMAG00000012714) igsf8 (ENSSMAG00000012735) ENSSMAG00000022200 TARBP2 (ENSSMAG00000012769) ENSSMAG00000027302 SP1 (ENSSMAG00000012813) ENSSMAG00000012830 AMHR2 (ENSSMAG00000012859) ENSSMAG00000012872 PCBP2 (ENSSMAG00000012889) Tongue sole MODERN SPECIES 2 ubap1 (ENSCSEG00000012455) dcaf12 (ENSCSEG00000012439) opn1lw1 (ENSCSEG00000011345) gnl3l (ENSCSEG00000011209) dido1 (ENSCSEG00000011175) ubap2a (ENSCSEG00000011158) KCNK15 (ENSCSEG00000011149) opn1sw2 (ENSCSEG00000011138) hcfc1a (ENSCSEG00000011118) shmt2 (ENSCSEG00000011047) NXPH4 (ENSCSEG00000011029) ##27 STAC3 (ENSCSEG00000011014) R3HDM2 (ENSCSEG00000010925) INHBC (ENSCSEG00000010908) gli1 (ENSCSEG00000010901) ENSCSEG00000010889 ##22 ARHGAP9 (ENSCSEG00000010868) ##24 mars1 (ENSCSEG00000010816) ddit3 (ENSCSEG00000010799) dctn2 (ENSCSEG00000010766) KIF5A (ENSCSEG00000010724) soat2 (ENSCSEG00000010682) igsf8 (ENSCSEG00000010672) sp7 (ENSCSEG00000010658) tarbp2 (ENSCSEG00000010631) ENSCSEG00000010620 ENSCSEG00000010614 sp1 (ENSCSEG00000010606) ENSCSEG00000010596 AMHR2 (ENSCSEG00000010574) PCBP2 (ENSCSEG00000010540) Eupercaria ANCESTRAL SPECIES ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Eupecaria_A ANCESTRAL SPECIES ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Eupecaria_B ANCESTRAL SPECIES 2 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Eupecaria_C ANCESTRAL SPECIES ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008.b ENSGT00940000160885 ENSGT00940000154129.gd ENSGT00940000159006.c.a Gilthead seabream MODERN SPECIES 20 GNAS (ENSSAUG00010020708) ENSSAUG00010021276 prelid3b (ENSSAUG00010021278) aurka (ENSSAUG00010021279) slc32a1 (ENSSAUG00010021281) ENSSAUG00010021285 PPP1R16B (ENSSAUG00010021293) fam210b (ENSSAUG00010021307) NDUFA4L2 (ENSSAUG00010021308) shmt2 (ENSSAUG00010021330) NXPH4 (ENSSAUG00010022698) ##27 STAC3 (ENSSAUG00010022700) R3HDM2 (ENSSAUG00010022718) INHBC (ENSSAUG00010023578) gli1 (ENSSAUG00010023582) ENSSAUG00010023585 ##22 ARHGAP9 (ENSSAUG00010023588) ##24 mars1 (ENSSAUG00010023606) ddit3 (ENSSAUG00010024012) dctn2 (ENSSAUG00010024017) KIF5A (ENSSAUG00010024019) soat2 (ENSSAUG00010024021) igsf8 (ENSSAUG00010024022) sp7 (ENSSAUG00010024024) tarbp2 (ENSSAUG00010024026) ENSSAUG00010024028 sp1 (ENSSAUG00010024032) ENSSAUG00010024034 AMHR2 (ENSSAUG00010024036) PCBP2 (ENSSAUG00010024041) MAP3K12 (ENSSAUG00010024058) Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008.b ENSGT00940000160885 ENSGT00940000154129.gd ENSGT00940000159006.c.a Large yellow croaker MODERN SPECIES 478 ENSLCRG00005021193 aurka (ENSLCRG00005021191) slc32a1 (ENSLCRG00005021190) ENSLCRG00005021187 ENSLCRG00005021179 ENSLCRG00005021174 PPP1R16B (ENSLCRG00005021158) ENSLCRG00005021143 NDUFA4L2 (ENSLCRG00005021136) shmt2 (ENSLCRG00005020491) NXPH4 (ENSLCRG00005020437) ##27 STAC3 (ENSLCRG00005020432) R3HDM2 (ENSLCRG00005020340) INHBC (ENSLCRG00005020329) gli1 (ENSLCRG00005020328) ENSLCRG00005020321 ##22 ARHGAP9 (ENSLCRG00005020314) ##24 mars1 (ENSLCRG00005018229) ddit3 (ENSLCRG00005018077) dctn2 (ENSLCRG00005018057) KIF5A (ENSLCRG00005017381) soat2 (ENSLCRG00005017358) igsf8 (ENSLCRG00005017357) sp7 (ENSLCRG00005017355) tarbp2 (ENSLCRG00005017354) ENSLCRG00005017346 sp1 (ENSLCRG00005017344) ENSLCRG00005017342 AMHR2 (ENSLCRG00005017338) PCBP2 (ENSLCRG00005017322) MAP3K12 (ENSLCRG00005016991) European seabass MODERN SPECIES 10 ENSDLAG00005031086 TUB (ENSDLAG00005009663) prelid3b (ENSDLAG00005009646) STK6 (ENSDLAG00005009640) slc32a1 (ENSDLAG00005009631) ENSDLAG00005009549 ENSDLAG00005009500 NDUFA4L2 (ENSDLAG00005026923) fam210b (ENSDLAG00005033260) ENSDLAG00005008419 NXPH4 (ENSDLAG00005008386) ##27 STAC3 (ENSDLAG00005034079) R3HDM2 (ENSDLAG00005007143) INHBC (ENSDLAG00005007075) gli1 (ENSDLAG00005007028) ENSDLAG00005030897 ##22 ARHGAP9 (ENSDLAG00005006921) ##24 mars1 (ENSDLAG00005004499) ddit3 (ENSDLAG00005013732) dctn2 (ENSDLAG00005013696) KIF5A (ENSDLAG00005012989) soat2 (ENSDLAG00005012634) igsf8 (ENSDLAG00005012622) ENSDLAG00005012618 ENSDLAG00005012584 ENSDLAG00005012558 SP1 (ENSDLAG00005028905) ENSDLAG00005012532 AMHR2 (ENSDLAG00005012420) PCBP2 (ENSDLAG00005012212) MAP3K12 (ENSDLAG00005011757) Perciformes ANCESTRAL SPECIES ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Perciformes_a ANCESTRAL SPECIES 5 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00940000154129.gd ENSGT00940000159006.c.a Channel bull blenny MODERN SPECIES 19 ENSCGOG00000013273 ENSCGOG00000013226 prelid3b (ENSCGOG00000013223) aurka (ENSCGOG00000013220) slc32a1 (ENSCGOG00000013219) ARHGAP40 (ENSCGOG00000013199) PPP1R16B (ENSCGOG00000013096) fam210b (ENSCGOG00000013094) NDUFA4L2 (ENSCGOG00000013093) shmt2 (ENSCGOG00000012216) NXPH4 (ENSCGOG00000012188) ##27 ENSCGOG00000012169 R3HDM2 (ENSCGOG00000010804) INHBC (ENSCGOG00000010778) gli1 (ENSCGOG00000010770) ENSCGOG00000010767 ##22 ARHGAP9 (ENSCGOG00000010754) ##24 mars1 (ENSCGOG00000008998) ddit3 (ENSCGOG00000010752) dctn2 (ENSCGOG00000008000) KIF5A (ENSCGOG00000003603) SOAT2 (ENSCGOG00000003521) igsf8 (ENSCGOG00000003517) sp7 (ENSCGOG00000003516) tarbp2 (ENSCGOG00000003490) ENSCGOG00000003488 sp1 (ENSCGOG00000003476) ENSCGOG00000003470 AMHR2 (ENSCGOG00000003462) PCBP2 (ENSCGOG00000003231) MAP3K12 (ENSCGOG00000003159) Pike perch MODERN SPECIES 17 tubb1 (ENSSLUG00000022418) prelid3b (ENSSLUG00000022398) aurka (ENSSLUG00000022392) slc32a1 (ENSSLUG00000022388) ENSSLUG00000022378 ENSSLUG00000022366 PPP1R16B (ENSSLUG00000022333) fam210b (ENSSLUG00000022322) NDUFA4L2 (ENSSLUG00000022317) shmt2 (ENSSLUG00000021526) NXPH4 (ENSSLUG00000021491) ##27 STAC3 (ENSSLUG00000021477) R3HDM2 (ENSSLUG00000020831) INHBC (ENSSLUG00000020798) gli1 (ENSSLUG00000020778) ENSSLUG00000020773 ##22 ARHGAP9 (ENSSLUG00000020770) ##24 mars1 (ENSSLUG00000020616) ddit3 (ENSSLUG00000020599) dctn2 (ENSSLUG00000020568) KIF5A (ENSSLUG00000019081) soat2 (ENSSLUG00000018992) igsf8 (ENSSLUG00000018986) sp7 (ENSSLUG00000018984) tarbp2 (ENSSLUG00000018974) ENSSLUG00000018967 sp1 (ENSSLUG00000018958) ENSSLUG00000018949 ENSSLUG00000018933 PCBP2 (ENSSLUG00000018910) MAP3K12 (ENSSLUG00000018620) Ovalentaria ANCESTRAL SPECIES 2 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Atherinomorphae ANCESTRAL SPECIES 2 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Oryzias ANCESTRAL SPECIES 1 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Oryzias_a ANCESTRAL SPECIES 5 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Japanese Medaka HdrR MODERN SPECIES 19 ENSORLG00000027123 prelid3b (ENSORLG00000005656) aurka (ENSORLG00000005631) slc32a1 (ENSORLG00000005623) ENSORLG00000005618 PPP1R16B (ENSORLG00000005566) ENSORLG00000026622 fam210b (ENSORLG00000026881) NDUFA4L2 (ENSORLG00000005542) shmt2 (ENSORLG00000005536) NXPH4 (ENSORLG00000028376) ##27 ENSORLG00000026255 R3HDM2 (ENSORLG00000005502) INHBC (ENSORLG00000005461) gli1 (ENSORLG00000005455) ENSORLG00000024860 ##22 ARHGAP9 (ENSORLG00000005431) ##24 mars1 (ENSORLG00000005405) ddit3 (ENSORLG00000022325) dctn2 (ENSORLG00000005353) KIF5A (ENSORLG00000005301) soat2 (ENSORLG00000005226) igsf8 (ENSORLG00000005224) sp7 (ENSORLG00000005215) TARBP2 (ENSORLG00000005209) ENSORLG00000005202 sp1 (ENSORLG00000005195) ENSORLG00000029598 PCBP2 (ENSORLG00000005176) MAP3K12 (ENSORLG00000005144) myg1 (ENSORLG00000005118) Cyprinodontiformes ANCESTRAL SPECIES 2 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Aplocheiloidei ANCESTRAL SPECIES 10 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Mangrove rivulus MODERN SPECIES 11 ipo9 (ENSKMAG00000013352) GNAS (ENSKMAG00000013306) ENSKMAG00000013126 prelid3b (ENSKMAG00000013055) aurka (ENSKMAG00000013017) slc32a1 (ENSKMAG00000012998) ENSKMAG00000012927 PPP1R16B (ENSKMAG00000012884) fam210b (ENSKMAG00000012861) NDUFA4L2 (ENSKMAG00000012841) shmt2 (ENSKMAG00000012809) NXPH4 (ENSKMAG00000012792) ##27 R3HDM2 (ENSKMAG00000012695) INHBC (ENSKMAG00000012645) gli1 (ENSKMAG00000012625) ENSKMAG00000012606 ##22 ARHGAP9 (ENSKMAG00000012550) ##24 ddit3 (ENSKMAG00000012519) mars1 (ENSKMAG00000012408) dctn2 (ENSKMAG00000012341) KIF5A (ENSKMAG00000012239) soat2 (ENSKMAG00000012185) igsf8 (ENSKMAG00000012166) sp7 (ENSKMAG00000012155) tarbp2 (ENSKMAG00000012142) ENSKMAG00000012119 sp1 (ENSKMAG00000012103) PCBP2 (ENSKMAG00000012031) MAP3K12 (ENSKMAG00000011955) myg1 (ENSKMAG00000011915) ENSKMAG00000011879 Cyprinodontoidei ANCESTRAL SPECIES 4 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Poeciliinae ANCESTRAL SPECIES 4 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Poecilia ANCESTRAL SPECIES 23 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 NAME_6 ANCESTRAL SPECIES 7 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Amazon molly MODERN SPECIES 254 ipo9 (ENSPFOG00000004346) GNAS (ENSPFOG00000004527) tubb1 (ENSPFOG00000004579) prelid3b (ENSPFOG00000004673) aurka (ENSPFOG00000004761) slc32a1 (ENSPFOG00000004785) ARHGAP40 (ENSPFOG00000005022) PPP1R16B (ENSPFOG00000005228) fam210b (ENSPFOG00000005251) NDUFA4L2 (ENSPFOG00000005259) shmt2 (ENSPFOG00000005424) NXPH4 (ENSPFOG00000005433) ##27 R3HDM2 (ENSPFOG00000006077) INHBC (ENSPFOG00000006113) gli1 (ENSPFOG00000006269) ENSPFOG00000006375 ##22 ARHGAP9 (ENSPFOG00000006700) ##24 mars1 (ENSPFOG00000006998) ddit3 (ENSPFOG00000007011) dctn2 (ENSPFOG00000007143) KIF5A (ENSPFOG00000007419) soat2 (ENSPFOG00000007442) igsf8 (ENSPFOG00000007483) sp7 (ENSPFOG00000007503) tarbp2 (ENSPFOG00000007586) ENSPFOG00000007616 sp1 (ENSPFOG00000007682) ENSPFOG00000007792 ENSPFOG00000007801 ENSPFOG00000007805 PCBP2 (ENSPFOG00000008011) Guppy MODERN SPECIES 457 GNAS (ENSPREG00000008899) ENSPREG00000008885 ENSPREG00000008878 prelid3b (ENSPREG00000008857) aurka (ENSPREG00000008806) slc32a1 (ENSPREG00000008781) ARHGAP40 (ENSPREG00000008695) PPP1R16B (ENSPREG00000008673) fam210b (ENSPREG00000008662) NDUFA4L2 (ENSPREG00000008652) shmt2 (ENSPREG00000008598) NXPH4 (ENSPREG00000008585) ##27 R3HDM2 (ENSPREG00000008424) INHBC (ENSPREG00000008347) gli1 (ENSPREG00000008295) ENSPREG00000008270 ##22 ARHGAP9 (ENSPREG00000008228) ##24 ddit3 (ENSPREG00000008197) mars1 (ENSPREG00000008123) dctn2 (ENSPREG00000008030) KIF5A (ENSPREG00000007937) SOAT2 (ENSPREG00000007854) igsf8 (ENSPREG00000007839) sp7 (ENSPREG00000007827) tarbp2 (ENSPREG00000007815) sp1 (ENSPREG00000007799) ENSPREG00000007784 PCBP2 (ENSPREG00000007742) MAP3K12 (ENSPREG00000007677) myg1 (ENSPREG00000007647) ENSPREG00000007608 Platyfish MODERN SPECIES 12 prelid3b (ENSXMAG00000006052) aurka (ENSXMAG00000006069) slc32a1 (ENSXMAG00000029858) ENSXMAG00000006086 ENSXMAG00000022069 ENSXMAG00000027745 PPP1R16B (ENSXMAG00000006109) fam210b (ENSXMAG00000006119) NDUFA4L2 (ENSXMAG00000023926) ENSXMAG00000021132 shmt2 (ENSXMAG00000006123) NXPH4 (ENSXMAG00000006151) ##27 R3HDM2 (ENSXMAG00000017978) INHBC (ENSXMAG00000023740) gli1 (ENSXMAG00000026676) ENSXMAG00000017955 ##22 ARHGAP9 (ENSXMAG00000017939) ##24 mars1 (ENSXMAG00000017920) ddit3 (ENSXMAG00000017918) dctn2 (ENSXMAG00000017906) KIF5A (ENSXMAG00000017874) soat2 (ENSXMAG00000017849) igsf8 (ENSXMAG00000017842) sp7 (ENSXMAG00000017840) tarbp2 (ENSXMAG00000017836) ENSXMAG00000028667 sp1 (ENSXMAG00000017829) ENSXMAG00000017826 PCBP2 (ENSXMAG00000023803) MAP3K12 (ENSXMAG00000017771) myg1 (ENSXMAG00000017759) NAME_4 ANCESTRAL SPECIES 14 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Sheepshead minnow MODERN SPECIES 146 ipo9 (ENSCVAG00000008811) GNAS (ENSCVAG00000008844) ENSCVAG00000008856 prelid3b (ENSCVAG00000008866) aurka (ENSCVAG00000008888) slc32a1 (ENSCVAG00000008898) ARHGAP40 (ENSCVAG00000008907) PPP1R16B (ENSCVAG00000008916) fam210b (ENSCVAG00000008921) NDUFA4L2 (ENSCVAG00000008937) shmt2 (ENSCVAG00000008971) NXPH4 (ENSCVAG00000008977) ##27 R3HDM2 (ENSCVAG00000009058) INHBC (ENSCVAG00000009072) gli1 (ENSCVAG00000009092) ENSCVAG00000009111 ##22 ARHGAP9 (ENSCVAG00000009264) ##24 mars1 (ENSCVAG00000009314) ddit3 (ENSCVAG00000009326) dctn2 (ENSCVAG00000009660) KIF5A (ENSCVAG00000009711) soat2 (ENSCVAG00000009750) igsf8 (ENSCVAG00000009801) sp7 (ENSCVAG00000009812) tarbp2 (ENSCVAG00000009832) ENSCVAG00000009843 sp1 (ENSCVAG00000009861) ENSCVAG00000009873 PCBP2 (ENSCVAG00000009913) MAP3K12 (ENSCVAG00000010006) myg1 (ENSCVAG00000010043) Mummichog MODERN SPECIES 2262 NXPH4 (ENSFHEG00000016500) ##27 R3HDM2 (ENSFHEG00000016484) INHBC (ENSFHEG00000016441) gli1 (ENSFHEG00000016436) ENSFHEG00000016429 ##22 ARHGAP9 (ENSFHEG00000016423) ##24 mars1 (ENSFHEG00000016374) ddit3 (ENSFHEG00000016339) dctn2 (ENSFHEG00000016325) ENSFHEG00000016257 KIF5A (ENSFHEG00000016245) ENSFHEG00000016159 igsf8 (ENSFHEG00000016131) sp7 (ENSFHEG00000016121) tarbp2 (ENSFHEG00000016118) ENSFHEG00000016108 sp1 (ENSFHEG00000016071) ENSFHEG00000016043 PCBP2 (ENSFHEG00000016024) MAP3K12 (ENSFHEG00000015967) Ovalentaria_B ANCESTRAL SPECIES 5 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Cichlidae ANCESTRAL SPECIES 1 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00730000112701 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.a.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00940000178807 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Pseudocrenilabrinae_A ANCESTRAL SPECIES 2 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.a.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00940000178807 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Haplochromini ANCESTRAL SPECIES 1 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.a.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00940000178807 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00390000002762.a.a.b.a.a.b ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a Burton s mouthbrooder MODERN SPECIES 379 ipo9 (ENSHBUG00000008849) ENSHBUG00000008870 prelid3b (ENSHBUG00000008888) GNAS (ENSHBUG00000008915) aurka (ENSHBUG00000008994) slc32a1 (ENSHBUG00000009015) ENSHBUG00000009062 PPP1R16B (ENSHBUG00000009098) fam210b (ENSHBUG00000009104) ENSHBUG00000009127 shmt2 (ENSHBUG00000009182) NXPH4 (ENSHBUG00000009189) ##27 R3HDM2 (ENSHBUG00000009227) INHBC (ENSHBUG00000009251) gli1 (ENSHBUG00000009262) ENSHBUG00000009297 ##22 ARHGAP9 (ENSHBUG00000009337) ##24 mars1 (ENSHBUG00000009575) ddit3 (ENSHBUG00000009592) dctn2 (ENSHBUG00000009631) Haplochromini_A ANCESTRAL SPECIES ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.a.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00940000178807 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00390000002762.a.a.b.a.a.b ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a Haplochromini_B ANCESTRAL SPECIES ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.a.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00940000178807 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00390000002762.a.a.b.a.a.b ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a Eastern happy MODERN SPECIES 17 ENSACLG00000019638 prelid3b (ENSACLG00000019614) aurka (ENSACLG00000019599) ENSACLG00000019588 slc32a1 (ENSACLG00000019578) ENSACLG00000019415 PPP1R16B (ENSACLG00000019384) fam210b (ENSACLG00000019366) NDUFA4L2 (ENSACLG00000019341) shmt2 (ENSACLG00000019281) NXPH4 (ENSACLG00000019253) ##27 ENSACLG00000019220 R3HDM2 (ENSACLG00000019106) INHBC (ENSACLG00000019096) gli1 (ENSACLG00000019087) ENSACLG00000019042 ##22 ARHGAP9 (ENSACLG00000018988) ##24 mars1 (ENSACLG00000018937) ddit3 (ENSACLG00000018924) dctn2 (ENSACLG00000018818) KIF5A (ENSACLG00000018664) soat2 (ENSACLG00000018633) igsf8 (ENSACLG00000018604) sp7 (ENSACLG00000018596) tarbp2 (ENSACLG00000018569) ENSACLG00000018522 sp1 (ENSACLG00000018496) shmt2 (ENSACLG00000018445) ENSACLG00000018364 PCBP2 (ENSACLG00000018264) MAP3K12 (ENSACLG00000018145) P. nyererei MODERN SPECIES 391 LMOD1 (ENSPNYG00000013146) shisa4 (ENSPNYG00000013155) ipo9 (ENSPNYG00000013180) GNAS (ENSPNYG00000013223) slc32a1 (ENSPNYG00000013253) ENSPNYG00000013267 PPP1R16B (ENSPNYG00000013296) fam210b (ENSPNYG00000013310) NDUFA4L2 (ENSPNYG00000013325) shmt2 (ENSPNYG00000013372) NXPH4 (ENSPNYG00000013423) ##27 ENSPNYG00000013442 R3HDM2 (ENSPNYG00000013479) INHBC (ENSPNYG00000013538) gli1 (ENSPNYG00000013573) ENSPNYG00000013672 ##22 ARHGAP9 (ENSPNYG00000013692) ##24 mars1 (ENSPNYG00000013809) ddit3 (ENSPNYG00000013950) dctn2 (ENSPNYG00000013974) KIF5A (ENSPNYG00000014033) soat2 (ENSPNYG00000014076) igsf8 (ENSPNYG00000014093) sp7 (ENSPNYG00000014107) tarbp2 (ENSPNYG00000014125) ENSPNYG00000014134 sp1 (ENSPNYG00000014149) shmt2 (ENSPNYG00000014175) PCBP2 (ENSPNYG00000014206) MAP3K12 (ENSPNYG00000014244) myg1 (ENSPNYG00000014288) Nile tilapia MODERN SPECIES 17 GNAS (ENSONIG00000011493) ENSONIG00000011492 prelid3b (ENSONIG00000007211) aurka (ENSONIG00000011487) slc32a1 (ENSONIG00000035212) ENSONIG00000011482 PPP1R16B (ENSONIG00000029036) fam210b (ENSONIG00000039924) NDUFA4L2 (ENSONIG00000042525) shmt2 (ENSONIG00000005066) NXPH4 (ENSONIG00000038466) ##27 ENSONIG00000039606 R3HDM2 (ENSONIG00000005075) INHBC (ENSONIG00000043033) gli1 (ENSONIG00000005084) ENSONIG00000005086 ##22 ARHGAP9 (ENSONIG00000005088) ##24 mars1 (ENSONIG00000005090) ddit3 (ENSONIG00000041620) dctn2 (ENSONIG00000005094) KIF5A (ENSONIG00000005097) soat2 (ENSONIG00000005106) igsf8 (ENSONIG00000005111) sp7 (ENSONIG00000041473) tarbp2 (ENSONIG00000005115) ENSONIG00000039640 sp1 (ENSONIG00000005121) shmt2 (ENSONIG00000005123) ENSONIG00000005133 PCBP2 (ENSONIG00000005135) MAP3K12 (ENSONIG00000005141) Pomacentridae ANCESTRAL SPECIES 3 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Bicolor damselfish MODERN SPECIES 444 STAC3 (ENSSPAG00000022569) R3HDM2 (ENSSPAG00000022594) INHBC (ENSSPAG00000022630) gli1 (ENSSPAG00000022634) ENSSPAG00000022652 ##22 ARHGAP9 (ENSSPAG00000022667) ##24 mars1 (ENSSPAG00000022691) ddit3 (ENSSPAG00000022721) dctn2 (ENSSPAG00000022735) KIF5A (ENSSPAG00000022770) ENSSPAG00000022781 ENSSPAG00000022784 ENSSPAG00000022788 igsf8 (ENSSPAG00000022792) sp7 (ENSSPAG00000022795) tarbp2 (ENSSPAG00000022797) ENSSPAG00000022815 sp1 (ENSSPAG00000022826) PCBP2 (ENSSPAG00000022833) MAP3K12 (ENSSPAG00000022850) Pomacentridae_A ANCESTRAL SPECIES 38 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ##27 ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##24 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Spiny chromis MODERN SPECIES 2 ENSAPOG00000020733 prelid3b (ENSAPOG00000020710) aurka (ENSAPOG00000020667) slc32a1 (ENSAPOG00000020624) ENSAPOG00000020607 PPP1R16B (ENSAPOG00000020597) ENSAPOG00000020559 ENSAPOG00000020522 NDUFA4L2 (ENSAPOG00000020508) shmt2 (ENSAPOG00000020482) NXPH4 (ENSAPOG00000020416) ##27 STAC3 (ENSAPOG00000020406) R3HDM2 (ENSAPOG00000020341) INHBC (ENSAPOG00000020292) gli1 (ENSAPOG00000020275) ENSAPOG00000020264 ##22 ARHGAP9 (ENSAPOG00000020261) ##24 mars1 (ENSAPOG00000020238) ddit3 (ENSAPOG00000000573) dctn2 (ENSAPOG00000020120) KIF5A (ENSAPOG00000000570) soat2 (ENSAPOG00000019929) igsf8 (ENSAPOG00000019915) sp7 (ENSAPOG00000019907) tarbp2 (ENSAPOG00000019892) ENSAPOG00000019871 sp1 (ENSAPOG00000019854) ENSAPOG00000019841 PCBP2 (ENSAPOG00000019824) MAP3K12 (ENSAPOG00000019737) myg1 (ENSAPOG00000019681) Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 16 ENSHCOG00000015745 ENSHCOG00000015753 ENSHCOG00000015766 ENSHCOG00000015772 ENSHCOG00000015823 ENSHCOG00000015839 ENSHCOG00000015852 ENSHCOG00000015859 ENSHCOG00000015871 ENSHCOG00000015874 ENSHCOG00000015880 ENSHCOG00000015886 ENSHCOG00000015893 ENSHCOG00000015904 ENSHCOG00000015926 ENSHCOG00000015928 ##22 gtdc1 (ENSHCOG00000015942) #23 itgav (ENSHCOG00000000447) ENSHCOG00000000456 ENSHCOG00000016033 ENSHCOG00000016040 ENSHCOG00000016058 ENSHCOG00000016067 ENSHCOG00000016081 ENSHCOG00000016112 ENSHCOG00000016124 ENSHCOG00000016149 ENSHCOG00000016174 ENSHCOG00000016194 ENSHCOG00000016201 ENSHCOG00000016207 Tiger tail seahorse MODERN SPECIES 516 cish (ENSHCOG00000001216) twf2a (ENSHCOG00000001210) wdr82 (ENSHCOG00000001204) aurka (ENSHCOG00000001197) slc32a1 (ENSHCOG00000001194) slc32a1 (ENSHCOG00000001191) ARHGAP40 (ENSHCOG00000001187) PPP1R16B (ENSHCOG00000001179) ENSHCOG00000001172 shmt2 (ENSHCOG00000001169) NXPH4 (ENSHCOG00000001158) ##27 STAC3 (ENSHCOG00000001152) R3HDM2 (ENSHCOG00000001142) INHBC (ENSHCOG00000001128) gli1 (ENSHCOG00000001116) ENSHCOG00000001104 ##22 ARHGAP9 (ENSHCOG00000001098) ##24 mars1 (ENSHCOG00000001090) ddit3 (ENSHCOG00000001079) dctn2 (ENSHCOG00000001072) KIF5A (ENSHCOG00000001057) soat2 (ENSHCOG00000001042) igsf8 (ENSHCOG00000001034) sp7 (ENSHCOG00000001032) tarbp2 (ENSHCOG00000001027) ENSHCOG00000001023 sp1 (ENSHCOG00000001021) ENSHCOG00000001013 cbfa2t2 (ENSHCOG00000001009) ENSHCOG00000001005 SNTA1 (ENSHCOG00000001001)