Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00950000183208.A #22 Gnathostomata DUPLICATION Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES 88 ENSGT00940000154533.b ENSGT00390000012204 ENSGT00940000157201 ENSGT00940000165390 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521 Euteleostomi ANCESTRAL SPECIES 31 ENSGT00940000154533.b ENSGT00390000012204 ENSGT00940000157201 ENSGT00940000165390 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000158887 ENSGT00940000166747 Sarcopterygii ANCESTRAL SPECIES 14 ENSGT00940000154533.b.d ENSGT00940000154533.b.c.a ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000181625 ENSGT00940000157521.b ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000166747 Tetrapoda ANCESTRAL SPECIES 6 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000170936 Amniota ANCESTRAL SPECIES 6 ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT01000000220430 ENSGT00390000016542 ENSGT00940000157233 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000166747 Mammalia ANCESTRAL SPECIES 6 ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT01000000220430 ENSGT00390000016542 ENSGT00940000157233 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000166747 ENSGT00940000155324 Theria ANCESTRAL SPECIES 5 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000166747 ENSGT00940000155324 Eutheria ANCESTRAL SPECIES 10 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 Boreoeutheria ANCESTRAL SPECIES 14 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT01050000244986.b.b ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Euarchontoglires ANCESTRAL SPECIES 14 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT01050000244986.b.b ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Primates ANCESTRAL SPECIES 13 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT01050000244986.b.b ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 Haplorrhini ANCESTRAL SPECIES 10 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT01050000244986.b.b ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 Simiiformes ANCESTRAL SPECIES 15 ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000154530.r.b.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000008527.k.a.d ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 16 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00910000147393 ENSGT00530000063686.a.b ENSGT00940000154530.r.b.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00910000146654 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 #23 ENSGT00910000147897 #24 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000008527.k.a.d ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Cercopithecidae ANCESTRAL SPECIES 13 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00910000147393 ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00940000153201.j.k.b ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00910000146654 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 #23 ENSGT00910000147897 #24 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00940000159262 ENSGT00940000163355 ENSGT00940000153434.a.b.b ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Cercopithecinae ANCESTRAL SPECIES 11 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00910000147393 ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00940000153201.j.k.a.a.b.a.b ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00910000146654 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 #23 ENSGT00910000147897 #24 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862.i.a ENSGT00940000159262 ENSGT00940000163355 ENSGT00940000153434.a.b.b ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Cercopithecinae_a ANCESTRAL SPECIES 16 ENSGT00530000063686.a.a ENSGT00910000147393 ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00940000153201.j.k.a.a.b.a.b ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00910000146654 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 #23 ENSGT00910000147897 #24 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00910000147617 ENSGT00390000015060.m.d ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862.i.a ENSGT00940000159262 ENSGT00940000163355 ENSGT00940000153434.a.b.b ENSGT01050000244848.C.a Cercopithecinae_b ANCESTRAL SPECIES 10 ENSGT00910000147393 ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00940000153201.j.k.a.a.b.a.b ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00910000146654 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01040000240515.h ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 #23 ENSGT00910000147897 #24 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00910000147617 ENSGT00390000015060.m.d ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00940000159262 ENSGT00940000163355 ENSGT00940000153434.a.b.b ENSGT01050000244848.C.a ENSGT01030000234618.F Cercopithecinae_d ANCESTRAL SPECIES ENSGT00530000063686.a.a ENSGT00910000147393 ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00940000153201.j.k.a.a.b.a.b ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01040000240515.h ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 #23 ENSGT00910000147897 #24 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00910000147617 ENSGT00390000015060.m.d ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00940000154507.g.b ENSGT00390000008527.k.a.d ENSGT00390000002862.i.a Drill MODERN SPECIES 987 ENSMLEG00000013965 #21 ZEB2 (ENSMLEG00000003652) #22 ENSMLEG00000040312 #23 ENSMLEG00000001942 #24 GTDC1 (ENSMLEG00000035705) #25 ENSMLEG00000041074 #26 ARHGAP15 (ENSMLEG00000039979) #27 KYNU (ENSMLEG00000043940) #28 Sooty mangabey MODERN SPECIES 480 ENSCATG00000038471 RBM43 (ENSCATG00000029617) RND3 (ENSCATG00000042453) ENSCATG00000036472 MMADHC (ENSCATG00000043511) LYPD6 (ENSCATG00000030657) LYPD6B (ENSCATG00000033638) KIF5C (ENSCATG00000045100) EPC2 (ENSCATG00000045291) MBD5 (ENSCATG00000040834) ORC4 (ENSCATG00000045066) ACVR2A (ENSCATG00000033685) ENSCATG00000039190 ENSCATG00000012613 ENSCATG00000012956 #21 ZEB2 (ENSCATG00000038567) #22 ENSCATG00000017157 #23 GTDC1 (ENSCATG00000040626) #25 ENSCATG00000042700 #26 ARHGAP15 (ENSCATG00000036437) #27 KYNU (ENSCATG00000038620) #28 ENSCATG00000013264 LRP1B (ENSCATG00000014557) ENSCATG00000007439 ENSCATG00000004097 NXPH2 (ENSCATG00000006119) SPOPL (ENSCATG00000045289) ENSCATG00000042403 Olive baboon MODERN SPECIES 1 LYPD6 (ENSPANG00000019895) LYPD6B (ENSPANG00000022096) KIF5C (ENSPANG00000018689) ENSPANG00000042526 EPC2 (ENSPANG00000009534) MBD5 (ENSPANG00000015848) ORC4 (ENSPANG00000009846) ACVR2A (ENSPANG00000012445) ENSPANG00000035057 CLIC1 (ENSPANG00000019928) ENSPANG00000015679 ENSPANG00000003757 ENSPANG00000043648 ENSPANG00000045723 ENSPANG00000040201 ZEB2 (ENSPANG00000008399) #22 GTDC1 (ENSPANG00000021875) #25 ARHGAP15 (ENSPANG00000009773) #27 KYNU (ENSPANG00000019763) #28 ENSPANG00000050765 ENSPANG00000039415 ENSPANG00000046031 LRP1B (ENSPANG00000007101) ENSPANG00000018859 ENSPANG00000038498 NXPH2 (ENSPANG00000015734) SPOPL (ENSPANG00000019764) THSD7B (ENSPANG00000018339) ENSPANG00000046987 CXCR4 (ENSPANG00000005008) DARS1 (ENSPANG00000008858) Macaca ANCESTRAL SPECIES 15 ENSGT00530000063686.a.a ENSGT00910000147393 ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00940000153201.j.k.a.a.b.a.b ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00390000010822.p ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00910000147617 ENSGT00390000015060.m.d ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862.i.a ENSGT00940000154507.g.b ENSGT00390000008527.k.a.d ENSGT00390000002862.i.b ENSGT00390000008859.b.d.k.b.f ENSGT00940000159262 Macaca_a ANCESTRAL SPECIES 17 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00390000010822.p ENSGT00940000158526 ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.b.a.a.a.a.b.a.a.b.a.a.a ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00390000015224.c.a.a.a.k.e.a ENSGT00950000183208.A.c.a.e #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00390000015060.m.d ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862.i.a ENSGT00390000002862.i.b ENSGT00390000008859.b.d.k.b.f ENSGT00940000159262 ENSGT01100000263493.a.b.a.a.a.a.a.a.a.a.a.a.a.a.b ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Rhesus MODERN SPECIES 3 LYPD6 (ENSMMUG00000038492) ENSMMUG00000056996 LYPD6B (ENSMMUG00000009475) KIF5C (ENSMMUG00000009268) ENSMMUG00000031468 EPC2 (ENSMMUG00000023176) ENSMMUG00000054591 ENSMMUG00000049941 MBD5 (ENSMMUG00000014921) ORC4 (ENSMMUG00000000043) ACVR2A (ENSMMUG00000000042) ENSMMUG00000006925 ENSMMUG00000055627 ENSMMUG00000052142 ENSMMUG00000065347 ZEB2 (ENSMMUG00000016845) #22 GTDC1 (ENSMMUG00000011922) #25 ARHGAP15 (ENSMMUG00000006528) #27 KYNU (ENSMMUG00000021330) #28 LRP1B (ENSMMUG00000009885) ENSMMUG00000013925 NXPH2 (ENSMMUG00000005176) SPOPL (ENSMMUG00000002560) HNMT (ENSMMUG00000006918) ENSMMUG00000042063 THSD7B (ENSMMUG00000017081) ENSMMUG00000061465 CXCR4 (ENSMMUG00000011918) ENSMMUG00000063101 DARS1 (ENSMMUG00000040854) MCM6 (ENSMMUG00000017486) Crab-eating macaque MODERN SPECIES 3 RND3 (ENSMFAG00000045221) ENSMFAG00000037633 ENSMFAG00000060272 MMADHC (ENSMFAG00000001801) LYPD6 (ENSMFAG00000002977) LYPD6B (ENSMFAG00000046204) KIF5C (ENSMFAG00000038774) ENSMFAG00000052887 EPC2 (ENSMFAG00000002751) ENSMFAG00000058250 MBD5 (ENSMFAG00000035493) ORC4 (ENSMFAG00000031595) ACVR2A (ENSMFAG00000003464) ENSMFAG00000019961 ENSMFAG00000052786 ZEB2 (ENSMFAG00000030381) #22 GTDC1 (ENSMFAG00000032520) #25 ARHGAP15 (ENSMFAG00000016740) #27 KYNU (ENSMFAG00000041160) #28 ENSMFAG00000049588 ENSMFAG00000064685 LRP1B (ENSMFAG00000036929) NXPH2 (ENSMFAG00000039309) SPOPL (ENSMFAG00000033909) ENSMFAG00000040453 ENSMFAG00000035962 ENSMFAG00000049120 THSD7B (ENSMFAG00000031342) ENSMFAG00000058697 ENSMFAG00000042200 CXCR4 (ENSMFAG00000037063) Pig-tailed macaque MODERN SPECIES 192 ENSMNEG00000015507 #21 ENSMNEG00000007919 #23 ZEB2 (ENSMNEG00000039161) #22 GTDC1 (ENSMNEG00000045082) #25 ENSMNEG00000031658 #26 ARHGAP15 (ENSMNEG00000032082) #27 KYNU (ENSMNEG00000028278) #28 ENSMNEG00000000025 LRP1B (ENSMNEG00000044502) ENSMNEG00000019241 ENSMNEG00000007981 NXPH2 (ENSMNEG00000042710) SPOPL (ENSMNEG00000039162) ENSMNEG00000037114 ENSMNEG00000043854 ENSMNEG00000043214 ENSMNEG00000045373 THSD7B (ENSMNEG00000030691) Vervet Monkey MODERN SPECIES 1 RIF1 (ENSCSAG00000016089) TNFAIP6 (ENSCSAG00000016095) NMI (ENSCSAG00000016102) RBM43 (ENSCSAG00000016105) RND3 (ENSCSAG00000016117) ENSCSAG00000016123 MMADHC (ENSCSAG00000016144) LYPD6 (ENSCSAG00000016149) LYPD6B (ENSCSAG00000016151) KIF5C (ENSCSAG00000016159) ENSCSAG00000018645 EPC2 (ENSCSAG00000016167) MBD5 (ENSCSAG00000016175) ORC4 (ENSCSAG00000016183) ACVR2A (ENSCSAG00000016192) ZEB2 (ENSCSAG00000016197) #22 GTDC1 (ENSCSAG00000016202) #25 ARHGAP15 (ENSCSAG00000016210) #27 KYNU (ENSCSAG00000016218) #28 LRP1B (ENSCSAG00000016246) NXPH2 (ENSCSAG00000016269) SPOPL (ENSCSAG00000016280) HNMT (ENSCSAG00000016288) ENSCSAG00000018644 ENSCSAG00000016290 CXCR4 (ENSCSAG00000016296) DARS1 (ENSCSAG00000016303) MCM6 (ENSCSAG00000016311) LCT (ENSCSAG00000016321) UBXN4 (ENSCSAG00000016344) R3HDM1 (ENSCSAG00000016356) Rhinopithecus ANCESTRAL SPECIES 19 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 #23 ENSGT00910000147897 #24 ENSGT00390000006631 #25 ENSGT00390000004690.a.a.v.jb #26 ENSGT00390000004450 ENSGT00440000039055 ENSGT00940000159874 ENSGT00550000074820.h.bb.a ENSGT00940000159730 ENSGT00390000004574 ENSGT00550000076427 ENSGT00940000158572 ENSGT00940000153451.a.a.a ENSGT00940000157961.C ENSGT00860000135964 Black snub-nosed monkey MODERN SPECIES 1223 ENSRBIG00000030909 #21 ZEB2 (ENSRBIG00000032824) #22 GTDC1 (ENSRBIG00000009657) #25 ENSRBIG00000034891 #26 Golden snub-nosed monkey MODERN SPECIES 2889 ENSRROG00000038359 #21 ENSRROG00000030532 #23 ZEB2 (ENSRROG00000036815) #22 ENSRROG00000040342 #24 GTDC1 (ENSRROG00000032211) #25 ENSRROG00000032262 #26 ARHGAP15 (ENSRROG00000035864) #27 KYNU (ENSRROG00000014406) #28 Hominoidea ANCESTRAL SPECIES 15 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00910000147393 ENSGT00530000063686.a.b ENSGT00940000154530.r.b.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00910000146654 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a.e #22 ENSGT00900000143214 #23 ENSGT00910000147897 #24 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT00940000163355 ENSGT00940000153434.a.b.a.b.l ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Hominidae ANCESTRAL SPECIES 17 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00910000147393 ENSGT00530000063686.a.b ENSGT00940000154530.r.b.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00910000146654 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a.e #22 ENSGT00910000147897 #24 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT00940000163355 ENSGT00940000153434.a.b.a.b.l ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Homo/Pan/Gorilla group ANCESTRAL SPECIES 14 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00910000147393 ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a.e #22 ENSGT00910000147897 #24 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT00940000163355 ENSGT00940000153434.a.b.a.b.l ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Gorilla MODERN SPECIES 15 ENSGGOG00000002066 NEB (ENSGGOG00000016489) RIF1 (ENSGGOG00000040178) TNFAIP6 (ENSGGOG00000022498) NMI (ENSGGOG00000013518) RBM43 (ENSGGOG00000041294) RND3 (ENSGGOG00000036127) MMADHC (ENSGGOG00000027348) LYPD6 (ENSGGOG00000007400) LYPD6B (ENSGGOG00000000801) KIF5C (ENSGGOG00000016596) EPC2 (ENSGGOG00000011299) MBD5 (ENSGGOG00000003833) ORC4 (ENSGGOG00000022258) ACVR2A (ENSGGOG00000015713) ZEB2 (ENSGGOG00000003186) #22 ENSGGOG00000039783 #24 GTDC1 (ENSGGOG00000015776) #25 ARHGAP15 (ENSGGOG00000034982) #27 KYNU (ENSGGOG00000007406) #28 LRP1B (ENSGGOG00000040868) ENSGGOG00000026916 NXPH2 (ENSGGOG00000008363) SPOPL (ENSGGOG00000016285) HNMT (ENSGGOG00000011567) THSD7B (ENSGGOG00000009703) ENSGGOG00000040151 ENSGGOG00000037201 CXCR4 (ENSGGOG00000016862) DARS1 (ENSGGOG00000007482) MCM6 (ENSGGOG00000010911) Homo/Pan group ANCESTRAL SPECIES 13 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00910000147393 ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a.e #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT00940000163355 ENSGT00940000153434.a.b.a.b.l ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 Pan ANCESTRAL SPECIES 12 ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00910000147393 ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00960000190927 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a.e #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00390000007384.c.b ENSGT00940000157521.b ENSGT00910000147617 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT01090000260061.c.b.lg.b.b.b ENSGT00390000002862 ENSGT00940000159262 ENSGT00940000153434.a.b.a.b.l ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Bonobo MODERN SPECIES 15 RIF1 (ENSPPAG00000023754) TNFAIP6 (ENSPPAG00000029874) NMI (ENSPPAG00000034174) ENSPPAG00000028605 RBM43 (ENSPPAG00000035042) RND3 (ENSPPAG00000042575) MMADHC (ENSPPAG00000029746) LYPD6 (ENSPPAG00000043249) LYPD6B (ENSPPAG00000039900) KIF5C (ENSPPAG00000031052) ENSPPAG00000001157 EPC2 (ENSPPAG00000040114) MBD5 (ENSPPAG00000037170) ORC4 (ENSPPAG00000043794) ACVR2A (ENSPPAG00000043981) ZEB2 (ENSPPAG00000025839) #22 GTDC1 (ENSPPAG00000033824) #25 ARHGAP15 (ENSPPAG00000031056) #27 KYNU (ENSPPAG00000008434) #28 ENSPPAG00000039032 LRP1B (ENSPPAG00000003706) ENSPPAG00000041987 ENSPPAG00000040658 NXPH2 (ENSPPAG00000039555) SPOPL (ENSPPAG00000001924) ENSPPAG00000038546 HNMT (ENSPPAG00000030141) THSD7B (ENSPPAG00000036421) ENSPPAG00000009775 ENSPPAG00000032080 CXCR4 (ENSPPAG00000041523) Chimpanzee MODERN SPECIES 15 NEB (ENSPTRG00000012536) RIF1 (ENSPTRG00000012534) TNFAIP6 (ENSPTRG00000012533) NMI (ENSPTRG00000012531) RBM43 (ENSPTRG00000046668) RND3 (ENSPTRG00000012527) MMADHC (ENSPTRG00000012525) LYPD6 (ENSPTRG00000012524) LYPD6B (ENSPTRG00000012523) KIF5C (ENSPTRG00000012521) ENSPTRG00000051205 EPC2 (ENSPTRG00000012518) MBD5 (ENSPTRG00000029184) ORC4 (ENSPTRG00000012515) ACVR2A (ENSPTRG00000012514) ZEB2 (ENSPTRG00000012513) #22 GTDC1 (ENSPTRG00000012511) #25 ARHGAP15 (ENSPTRG00000012510) #27 KYNU (ENSPTRG00000012509) #28 ENSPTRG00000048004 LRP1B (ENSPTRG00000012508) ENSPTRG00000042896 ENSPTRG00000052120 NXPH2 (ENSPTRG00000012505) SPOPL (ENSPTRG00000012504) ENSPTRG00000042850 HNMT (ENSPTRG00000012503) THSD7B (ENSPTRG00000012502) ENSPTRG00000042775 CXCR4 (ENSPTRG00000012501) DARS1 (ENSPTRG00000012500) Human MODERN SPECIES 11 ARL5A (ENSG00000162980) NEB (ENSG00000183091) RIF1 (ENSG00000080345) TNFAIP6 (ENSG00000123610) NMI (ENSG00000123609) RBM43 (ENSG00000184898) RND3 (ENSG00000115963) MMADHC (ENSG00000168288) LYPD6 (ENSG00000187123) LYPD6B (ENSG00000150556) KIF5C (ENSG00000168280) EPC2 (ENSG00000135999) MBD5 (ENSG00000204406) ORC4 (ENSG00000115947) ACVR2A (ENSG00000121989) ZEB2 (ENSG00000169554) #22 GTDC1 (ENSG00000121964) #25 ARHGAP15 (ENSG00000075884) #27 KYNU (ENSG00000115919) #28 LRP1B (ENSG00000168702) NXPH2 (ENSG00000144227) SPOPL (ENSG00000144228) HNMT (ENSG00000150540) THSD7B (ENSG00000144229) CXCR4 (ENSG00000121966) DARS1 (ENSG00000115866) MCM6 (ENSG00000076003) LCT (ENSG00000115850) UBXN4 (ENSG00000144224) R3HDM1 (ENSG00000048991) ZRANB3 (ENSG00000121988) Orangutan MODERN SPECIES 15 TNFAIP6 (ENSPPYG00000012845) ENSPPYG00000012844 RBM43 (ENSPPYG00000037248) ENSPPYG00000036365 RND3 (ENSPPYG00000012842) MMADHC (ENSPPYG00000012840) LYPD6 (ENSPPYG00000012839) ENSPPYG00000029593 KIF5C (ENSPPYG00000012838) ENSPPYG00000032644 EPC2 (ENSPPYG00000012837) ENSPPYG00000036116 MBD5 (ENSPPYG00000012836) ORC4 (ENSPPYG00000012835) ACVR2A (ENSPPYG00000012834) ZEB2 (ENSPPYG00000012831) #22 ENSPPYG00000031095 #25 GTDC1 (ENSPPYG00000034543) #25 ARHGAP15 (ENSPPYG00000012828) #27 KYNU (ENSPPYG00000012827) #28 LRP1B (ENSPPYG00000012826) NXPH2 (ENSPPYG00000031440) SPOPL (ENSPPYG00000039370) ENSPPYG00000018028 HNMT (ENSPPYG00000012824) THSD7B (ENSPPYG00000036773) CXCR4 (ENSPPYG00000012823) DARS1 (ENSPPYG00000012822) MCM6 (ENSPPYG00000012821) LCT (ENSPPYG00000012820) UBXN4 (ENSPPYG00000012819) Gibbon MODERN SPECIES 12 SNX8 (ENSNLEG00000008623) EIF3B (ENSNLEG00000008647) CHST12 (ENSNLEG00000018713) ENSNLEG00000027995 LFNG (ENSNLEG00000008670) LYPD6 (ENSNLEG00000008684) LYPD6B (ENSNLEG00000031677) KIF5C (ENSNLEG00000008723) ENSNLEG00000035194 EPC2 (ENSNLEG00000009134) MBD5 (ENSNLEG00000009103) ORC4 (ENSNLEG00000009077) ACVR2A (ENSNLEG00000009051) ENSNLEG00000034154 ENSNLEG00000029139 #21 ZEB2 (ENSNLEG00000009020) #22 ENSNLEG00000033258 #23 ENSNLEG00000031423 #24 GTDC1 (ENSNLEG00000009003) #25 ARHGAP15 (ENSNLEG00000008984) #27 KYNU (ENSNLEG00000008970) #28 LRP1B (ENSNLEG00000008924) ENSNLEG00000030102 ENSNLEG00000028194 NXPH2 (ENSNLEG00000008920) ENSNLEG00000030338 ENSNLEG00000033628 HNMT (ENSNLEG00000008899) THSD7B (ENSNLEG00000008876) ENSNLEG00000028168 ENSNLEG00000031448 Catarrhini ANCESTRAL SPECIES 14 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 ENSGT00940000161833 ENSGT01020000230401.a.a.a.i.a.b Hominoidea ANCESTRAL SPECIES 10 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT01100000263819 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 ENSGT00940000161833 ENSGT01020000230401.a.a.a.i.a.b Hominidae ANCESTRAL SPECIES 81 ENSGT00950000183208.A.c.a.f ##22 ENSGT00900000143214 #23 Homo/Pan/Gorilla group ANCESTRAL SPECIES 11 ENSGT00940000157235 ENSGT00940000158985.b ENSGT00940000159756 ENSGT00940000158402 ENSGT01030000234946.d.a.b.b ENSGT00940000154965.B ENSGT00390000001577 ENSGT01100000263819 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00900000143214 #23 ENSGT00390000017515.o.b ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 Homo/Pan group ANCESTRAL SPECIES 10 ENSGT00940000157235 ENSGT00940000158985.b ENSGT00940000159756 ENSGT00940000158402 ENSGT01030000234946.d.a.b.b ENSGT00940000154965.B ENSGT00390000001577 ENSGT01100000263819 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00900000143214 #23 ENSGT00390000017515.o.b ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 Pan ANCESTRAL SPECIES 7 ENSGT00940000157235 ENSGT00940000158985.b ENSGT00940000159756 ENSGT00940000158402 ENSGT01030000234946.d.a.b.b ENSGT00940000154965.B ENSGT00390000001577 ENSGT01100000263819 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00900000143214 #23 ENSGT00390000017515.o.b ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 Chimpanzee MODERN SPECIES 17 PACRGL (ENSPTRG00000015945) SLIT2 (ENSPTRG00000024331) ENSPTRG00000050513 LCORL (ENSPTRG00000052306) NCAPG (ENSPTRG00000015942) ENSPTRG00000045108 DCAF16 (ENSPTRG00000051571) FAM184B (ENSPTRG00000015940) MED28 (ENSPTRG00000045116) LAP3 (ENSPTRG00000015938) CLRN2 (ENSPTRG00000050671) QDPR (ENSPTRG00000015936) ENSPTRG00000009418 ENSPTRG00000039221 LDB2 (ENSPTRG00000015935) ENSPTRG00000049469 ##22 ENSPTRG00000045915 #23 ENSPTRG00000049952 TAPT1 (ENSPTRG00000015933) PROM1 (ENSPTRG00000015932) FGFBP2 (ENSPTRG00000031250) FGFBP1 (ENSPTRG00000015931) CD38 (ENSPTRG00000015930) BST1 (ENSPTRG00000015929) FAM200B (ENSPTRG00000044690) FBXL5 (ENSPTRG00000015927) CC2D2A (ENSPTRG00000015926) C1QTNF7 (ENSPTRG00000015925) CPEB2 (ENSPTRG00000015924) BOD1L1 (ENSPTRG00000015922) NKX3-2 (ENSPTRG00000048496) Bonobo MODERN SPECIES 17 ENSPPAG00000011801 ADGRA3 (ENSPPAG00000035849) KCNIP4 (ENSPPAG00000033844) PACRGL (ENSPPAG00000027879) SLIT2 (ENSPPAG00000043820) LCORL (ENSPPAG00000039308) NCAPG (ENSPPAG00000028077) ENSPPAG00000023045 DCAF16 (ENSPPAG00000021334) FAM184B (ENSPPAG00000038055) MED28 (ENSPPAG00000034569) LAP3 (ENSPPAG00000029619) CLRN2 (ENSPPAG00000027659) QDPR (ENSPPAG00000036323) LDB2 (ENSPPAG00000033538) ENSPPAG00000033372 ##22 ENSPPAG00000033323 TAPT1 (ENSPPAG00000027508) PROM1 (ENSPPAG00000032761) FGFBP2 (ENSPPAG00000012344) FGFBP1 (ENSPPAG00000023092) ENSPPAG00000035131 CD38 (ENSPPAG00000036378) BST1 (ENSPPAG00000034960) FAM200B (ENSPPAG00000012482) FBXL5 (ENSPPAG00000007317) CC2D2A (ENSPPAG00000039745) C1QTNF7 (ENSPPAG00000000881) ENSPPAG00000009844 BOD1L1 (ENSPPAG00000014926) NKX3-2 (ENSPPAG00000039595) Gorilla MODERN SPECIES 17 ENSGGOG00000026378 ADGRA3 (ENSGGOG00000026666) ENSGGOG00000038375 PACRGL (ENSGGOG00000012603) SLIT2 (ENSGGOG00000006151) ENSGGOG00000037439 LCORL (ENSGGOG00000014894) NCAPG (ENSGGOG00000015019) ENSGGOG00000038365 FAM184B (ENSGGOG00000007263) MED28 (ENSGGOG00000001114) LAP3 (ENSGGOG00000001110) CLRN2 (ENSGGOG00000004114) QDPR (ENSGGOG00000004110) LDB2 (ENSGGOG00000000354) ENSGGOG00000039877 ##22 ENSGGOG00000039503 TAPT1 (ENSGGOG00000011812) PROM1 (ENSGGOG00000016139) FGFBP2 (ENSGGOG00000028579) FGFBP1 (ENSGGOG00000016135) CD38 (ENSGGOG00000006165) BST1 (ENSGGOG00000008845) FAM200B (ENSGGOG00000027844) FBXL5 (ENSGGOG00000010962) CC2D2A (ENSGGOG00000002758) C1QTNF7 (ENSGGOG00000005890) CPEB2 (ENSGGOG00000004449) BOD1L1 (ENSGGOG00000027616) NKX3-2 (ENSGGOG00000008589) RAB28 (ENSGGOG00000024190) Gibbon MODERN SPECIES 12 ADGRA3 (ENSNLEG00000016741) KCNIP4 (ENSNLEG00000016720) PACRGL (ENSNLEG00000016706) SLIT2 (ENSNLEG00000016689) ENSNLEG00000031015 LCORL (ENSNLEG00000016684) NCAPG (ENSNLEG00000016632) ENSNLEG00000036017 FAM184B (ENSNLEG00000031656) ENSNLEG00000016620 LAP3 (ENSNLEG00000016606) CLRN2 (ENSNLEG00000016604) QDPR (ENSNLEG00000016583) LDB2 (ENSNLEG00000016557) ENSNLEG00000031825 ENSNLEG00000029526 ##22 TAPT1 (ENSNLEG00000016541) PROM1 (ENSNLEG00000016422) ENSNLEG00000027474 CD38 (ENSNLEG00000032175) BST1 (ENSNLEG00000016391) FAM200B (ENSNLEG00000018958) FBXL5 (ENSNLEG00000016352) CC2D2A (ENSNLEG00000016292) C1QTNF7 (ENSNLEG00000016288) ENSNLEG00000016275 ENSNLEG00000030451 BOD1L1 (ENSNLEG00000016260) NKX3-2 (ENSNLEG00000016256) RAB28 (ENSNLEG00000016243) ENSNLEG00000030301 Cercopithecidae ANCESTRAL SPECIES 10 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000003682.ib.a.b.f.b.a.b ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00940000153675.a.a.b.e.a.g.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 ENSGT00940000161833 Rhinopithecus ANCESTRAL SPECIES 397 ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00940000153675.a.a.b.e.a.g.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 Black snub-nosed monkey MODERN SPECIES 515 ENSRBIG00000040694 LDB2 (ENSRBIG00000036476) ENSRBIG00000031383 ##22 ENSRBIG00000028214 TAPT1 (ENSRBIG00000001303) PROM1 (ENSRBIG00000035435) FGFBP1 (ENSRBIG00000029998) CD38 (ENSRBIG00000033782) ENSRBIG00000031766 BST1 (ENSRBIG00000038163) FAM200B (ENSRBIG00000030919) FBXL5 (ENSRBIG00000033592) CC2D2A (ENSRBIG00000028040) C1QTNF7 (ENSRBIG00000017615) CPEB2 (ENSRBIG00000028478) Golden snub-nosed monkey MODERN SPECIES 1401 ENSRROG00000030574 LDB2 (ENSRROG00000031191) ENSRROG00000031165 ##22 Cercopithecinae ANCESTRAL SPECIES 14 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000003682.ib.a.b.f.b.a.b ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00940000153675.a.a.b.e.a.g.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 ENSGT00940000161833 Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000003682.ib.a.b.f.b.a.b ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00940000153675.a.a.b.e.a.g.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 ENSGT00940000161833 Cercopithecinae_b ANCESTRAL SPECIES 6 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000003682.ib.a.b.f.b.a.b ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00940000154372.a.b ENSGT00390000017291.a ENSGT00940000153675.a.a.b.e.a.g.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 ENSGT00940000161833 Cercopithecinae_d ANCESTRAL SPECIES 91 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00950000183208.A.c.a.f ##22 ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a ENSGT00390000017291.a ENSGT00940000153675.a.a.b.e.a.g.a ENSGT00390000017291.b ENSGT00940000164387 ENSGT00390000006172 ENSGT00940000155482 ENSGT00940000159588 ENSGT00940000160357 ENSGT00940000156198.c.a ENSGT00940000161843 ENSGT00940000161833 ENSGT01020000230401.a.a.a.i.a.b Sooty mangabey MODERN SPECIES 551 GBA3 (ENSCATG00000042364) ADGRA3 (ENSCATG00000042545) KCNIP4 (ENSCATG00000031858) PACRGL (ENSCATG00000043616) SLIT2 (ENSCATG00000044093) LCORL (ENSCATG00000032265) NCAPG (ENSCATG00000032636) DCAF16 (ENSCATG00000014975) ENSCATG00000016096 FAM184B (ENSCATG00000040065) MED28 (ENSCATG00000030546) LAP3 (ENSCATG00000040965) CLRN2 (ENSCATG00000032386) QDPR (ENSCATG00000029669) LDB2 (ENSCATG00000019886) ENSCATG00000040373 ##22 TAPT1 (ENSCATG00000042001) PROM1 (ENSCATG00000035341) CD38 (ENSCATG00000045367) ENSCATG00000030711 BST1 (ENSCATG00000003303) FAM200B (ENSCATG00000020983) FBXL5 (ENSCATG00000041236) CC2D2A (ENSCATG00000037758) C1QTNF7 (ENSCATG00000014989) CPEB2 (ENSCATG00000040126) ENSCATG00000019681 BOD1L1 (ENSCATG00000040508) NKX3-2 (ENSCATG00000042215) RAB28 (ENSCATG00000038542) ENSCATG00000013123 Platyrrhini ANCESTRAL SPECIES 9 ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000154530.r.b.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00390000002748.j ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000008527.k.a.d ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Cebidae ANCESTRAL SPECIES 11 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00390000002748.j ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000008527.k.a.d ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Marmoset MODERN SPECIES 18 ENSCJAG00000083510 RND3 (ENSCJAG00000045984) ENSCJAG00000071388 ENSCJAG00000075779 ENSCJAG00000070079 ENSCJAG00000003086 LYPD6 (ENSCJAG00000055489) LYPD6B (ENSCJAG00000003077) KIF5C (ENSCJAG00000003053) ENSCJAG00000076357 EPC2 (ENSCJAG00000012637) MBD5 (ENSCJAG00000012594) ORC4 (ENSCJAG00000012561) ACVR2A (ENSCJAG00000012496) ENSCJAG00000065177 ZEB2 (ENSCJAG00000012457) #22 ENSCJAG00000070871 GTDC1 (ENSCJAG00000012421) #25 ENSCJAG00000079909 ARHGAP15 (ENSCJAG00000012381) #27 KYNU (ENSCJAG00000012322) #28 ENSCJAG00000087216 ENSCJAG00000012316 ENSCJAG00000052641 LRP1B (ENSCJAG00000012158) ENSCJAG00000071088 NXPH2 (ENSCJAG00000012152) SPOPL (ENSCJAG00000041394) ENSCJAG00000086160 HNMT (ENSCJAG00000012109) ENSCJAG00000063660 Cebidae_a ANCESTRAL SPECIES 27 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00390000002748.j ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000008527.k.a.d ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Bolivian squirrel monkey MODERN SPECIES 46 NEB (ENSSBOG00000031622) RIF1 (ENSSBOG00000029530) TNFAIP6 (ENSSBOG00000034644) NMI (ENSSBOG00000035067) RBM43 (ENSSBOG00000022371) RND3 (ENSSBOG00000025108) ENSSBOG00000035889 LYPD6 (ENSSBOG00000019011) LYPD6B (ENSSBOG00000017701) KIF5C (ENSSBOG00000013675) EPC2 (ENSSBOG00000035940) MBD5 (ENSSBOG00000024663) ORC4 (ENSSBOG00000028104) ACVR2A (ENSSBOG00000025103) ENSSBOG00000018747 #21 ZEB2 (ENSSBOG00000026124) #22 ENSSBOG00000025406 #23 GTDC1 (ENSSBOG00000030737) #25 ENSSBOG00000023369 ARHGAP15 (ENSSBOG00000027845) #27 KYNU (ENSSBOG00000029002) #28 ENSSBOG00000021516 LRP1B (ENSSBOG00000032751) NXPH2 (ENSSBOG00000035598) SPOPL (ENSSBOG00000021667) ENSSBOG00000028590 HNMT (ENSSBOG00000022759) ENSSBOG00000013560 THSD7B (ENSSBOG00000020495) CXCR4 (ENSSBOG00000004406) DARS1 (ENSSBOG00000009265) Capuchin MODERN SPECIES 27 NEB (ENSCCAG00000026566) RIF1 (ENSCCAG00000024760) TNFAIP6 (ENSCCAG00000022288) NMI (ENSCCAG00000022500) RBM43 (ENSCCAG00000020911) RND3 (ENSCCAG00000030386) MMADHC (ENSCCAG00000036477) LYPD6 (ENSCCAG00000028399) LYPD6B (ENSCCAG00000030062) KIF5C (ENSCCAG00000031241) EPC2 (ENSCCAG00000037425) MBD5 (ENSCCAG00000030324) ORC4 (ENSCCAG00000008932) ACVR2A (ENSCCAG00000034862) ENSCCAG00000019840 #21 ZEB2 (ENSCCAG00000036823) #22 GTDC1 (ENSCCAG00000001331) #25 ARHGAP15 (ENSCCAG00000034364) #27 KYNU (ENSCCAG00000028624) #28 LRP1B (ENSCCAG00000026411) ENSCCAG00000028899 ENSCCAG00000030027 NXPH2 (ENSCCAG00000030575) ENSCCAG00000029320 ENSCCAG00000030134 SPOPL (ENSCCAG00000025193) ENSCCAG00000028597 HNMT (ENSCCAG00000020581) Mas night monkey MODERN SPECIES 1327 ENSANAG00000031452 #21 ZEB2 (ENSANAG00000029252) #22 ENSANAG00000020250 #23 GTDC1 (ENSANAG00000028072) #25 ENSANAG00000030213 ARHGAP15 (ENSANAG00000032949) #27 KYNU (ENSANAG00000035940) #28 Tarsier MODERN SPECIES 4528 ZEB2 (ENSTSYG00000009434) #22 ENSTSYG00000025627 #23 Strepsirrhini ANCESTRAL SPECIES 10 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 Lemuriformes ANCESTRAL SPECIES 5 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 Mouse lemur MODERN SPECIES 30 NEB (ENSMICG00000007063) RIF1 (ENSMICG00000046127) TNFAIP6 (ENSMICG00000045439) NMI (ENSMICG00000046560) RBM43 (ENSMICG00000002078) ENSMICG00000033304 RND3 (ENSMICG00000035694) MMADHC (ENSMICG00000005952) LYPD6 (ENSMICG00000041550) LYPD6B (ENSMICG00000016688) KIF5C (ENSMICG00000016670) EPC2 (ENSMICG00000016659) MBD5 (ENSMICG00000017046) ORC4 (ENSMICG00000004578) ACVR2A (ENSMICG00000004565) ZEB2 (ENSMICG00000017462) #22 GTDC1 (ENSMICG00000007473) #25 ARHGAP15 (ENSMICG00000043939) #27 SCN3A (ENSMICG00000001132) ENSMICG00000002843 CSRNP3 (ENSMICG00000015267) GALNT3 (ENSMICG00000015295) TTC21B (ENSMICG00000015487) ENSMICG00000031358 SCN1A (ENSMICG00000004920) SCN9A (ENSMICG00000004943) SCN7A (ENSMICG00000014439) XIRP2 (ENSMICG00000033404) B3GALT1 (ENSMICG00000042176) STK39 (ENSMICG00000012416) ENSMICG00000034404 Lemuriformes_a ANCESTRAL SPECIES 265 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 Greater bamboo lemur MODERN SPECIES 497 ENSPSMG00000002747 #21 ZEB2 (ENSPSMG00000002937) #22 GTDC1 (ENSPSMG00000003397) #25 ARHGAP15 (ENSPSMG00000003530) #27 KYNU (ENSPSMG00000003553) #28 Coquerels sifaka MODERN SPECIES 235 ENSPCOG00000017463 #21 ZEB2 (ENSPCOG00000022388) #22 ENSPCOG00000018425 #23 GTDC1 (ENSPCOG00000020298) #25 ARHGAP15 (ENSPCOG00000020719) #27 KYNU (ENSPCOG00000020945) #28 Bushbaby MODERN SPECIES 179 TNFAIP6 (ENSOGAG00000011099) NMI (ENSOGAG00000002762) RBM43 (ENSOGAG00000002761) RND3 (ENSOGAG00000006980) MMADHC (ENSOGAG00000034385) LYPD6 (ENSOGAG00000009025) LYPD6B (ENSOGAG00000009022) KIF5C (ENSOGAG00000009021) ENSOGAG00000027538 EPC2 (ENSOGAG00000009018) MBD5 (ENSOGAG00000005182) ENSOGAG00000007606 ORC4 (ENSOGAG00000004022) ACVR2A (ENSOGAG00000004021) ENSOGAG00000025795 ZEB2 (ENSOGAG00000010020) #22 GTDC1 (ENSOGAG00000001984) #25 ARHGAP15 (ENSOGAG00000001981) #27 KYNU (ENSOGAG00000001979) #28 ENSOGAG00000033357 ENSOGAG00000031179 ENSOGAG00000027412 Euarchontoglires_A ANCESTRAL SPECIES 13 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Tree shrew MODERN SPECIES 3650 ZEB2 (ENSTBEG00000013983) #22 Glires ANCESTRAL SPECIES 14 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Lagomorpha ANCESTRAL SPECIES 12 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 ENSGT00940000158559 Rabbit MODERN SPECIES 18 ENSOCUG00000025786 ENSOCUG00000036417 RND3 (ENSOCUG00000001751) MMADHC (ENSOCUG00000008124) LYPD6 (ENSOCUG00000008118) ENSOCUG00000030777 LYPD6B (ENSOCUG00000008346) KIF5C (ENSOCUG00000009699) EPC2 (ENSOCUG00000012712) ENSOCUG00000034178 ENSOCUG00000033587 MBD5 (ENSOCUG00000010432) ORC4 (ENSOCUG00000016412) ACVR2A (ENSOCUG00000016398) ENSOCUG00000030462 ZEB2 (ENSOCUG00000027880) #22 ENSOCUG00000038697 #23 GTDC1 (ENSOCUG00000002102) #25 ARHGAP15 (ENSOCUG00000000471) #27 KYNU (ENSOCUG00000006194) #28 ENSOCUG00000024326 ENSOCUG00000032003 LRP1B (ENSOCUG00000017165) ENSOCUG00000038204 ENSOCUG00000032587 ENSOCUG00000032512 ENSOCUG00000021532 ENSOCUG00000025059 NXPH2 (ENSOCUG00000026297) SPOPL (ENSOCUG00000006944) ENSOCUG00000034988 Pika MODERN SPECIES 3244 ZEB2 (ENSOPRG00000006205) #22 Rodentia ANCESTRAL SPECIES 14 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Rodentia_A ANCESTRAL SPECIES 13 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 Hystricomorpha ANCESTRAL SPECIES 20 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b.d ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 Hystricomorpha_a ANCESTRAL SPECIES 17 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b.d ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 Hystricomorpha_b ANCESTRAL SPECIES 67 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b.d ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 ENSGT00940000158559 Long-tailed chinchilla MODERN SPECIES 147 NEB (ENSCLAG00000002157) RIF1 (ENSCLAG00000001517) TNFAIP6 (ENSCLAG00000002857) NMI (ENSCLAG00000002759) RBM43 (ENSCLAG00000002635) ENSCLAG00000002555 ENSCLAG00000002537 MMADHC (ENSCLAG00000002129) LYPD6 (ENSCLAG00000001952) LYPD6B (ENSCLAG00000002017) KIF5C (ENSCLAG00000001868) EPC2 (ENSCLAG00000001768) MBD5 (ENSCLAG00000001690) ORC4 (ENSCLAG00000002811) ACVR2A (ENSCLAG00000002708) ZEB2 (ENSCLAG00000002230) #22 GTDC1 (ENSCLAG00000007819) #25 ARHGAP15 (ENSCLAG00000006756) #27 KYNU (ENSCLAG00000005935) #28 LRP1B (ENSCLAG00000002036) NXPH2 (ENSCLAG00000017455) SPOPL (ENSCLAG00000001710) HNMT (ENSCLAG00000001523) THSD7B (ENSCLAG00000001388) CXCR4 (ENSCLAG00000002279) DARS1 (ENSCLAG00000006355) MCM6 (ENSCLAG00000005315) LCT (ENSCLAG00000005005) UBXN4 (ENSCLAG00000004332) R3HDM1 (ENSCLAG00000007962) ZRANB3 (ENSCLAG00000006849) Degu MODERN SPECIES 123 RND3 (ENSODEG00000003549) ENSODEG00000003457 ENSODEG00000003416 LYPD6 (ENSODEG00000003357) LYPD6B (ENSODEG00000003306) ENSODEG00000018967 KIF5C (ENSODEG00000003161) EPC2 (ENSODEG00000003123) ENSODEG00000003098 ENSODEG00000003076 ENSODEG00000018860 ENSODEG00000002909 ENSODEG00000002882 ORC4 (ENSODEG00000007273) ACVR2A (ENSODEG00000007139) ZEB2 (ENSODEG00000006916) #22 ENSODEG00000006826 ENSODEG00000006741 #25 ARHGAP15 (ENSODEG00000006679) #27 ENSODEG00000006607 #27 KYNU (ENSODEG00000003172) #28 Guinea pig MODERN SPECIES 3 RIF1 (ENSCPOG00000037898) ENSCPOG00000038795 TNFAIP6 (ENSCPOG00000007974) NMI (ENSCPOG00000013053) RBM43 (ENSCPOG00000037758) ENSCPOG00000033292 RND3 (ENSCPOG00000035751) MMADHC (ENSCPOG00000007690) LYPD6 (ENSCPOG00000007686) LYPD6B (ENSCPOG00000034526) KIF5C (ENSCPOG00000026278) EPC2 (ENSCPOG00000008502) MBD5 (ENSCPOG00000006236) ORC4 (ENSCPOG00000008580) ACVR2A (ENSCPOG00000008575) ZEB2 (ENSCPOG00000004182) #22 ENSCPOG00000035797 #23 GTDC1 (ENSCPOG00000007030) #25 ARHGAP15 (ENSCPOG00000007467) #27 KYNU (ENSCPOG00000011220) #28 ENSCPOG00000021859 ENSCPOG00000038865 LRP1B (ENSCPOG00000014122) NXPH2 (ENSCPOG00000003323) SPOPL (ENSCPOG00000006344) HNMT (ENSCPOG00000002449) THSD7B (ENSCPOG00000001976) CXCR4 (ENSCPOG00000014249) DARS1 (ENSCPOG00000004614) MCM6 (ENSCPOG00000004609) ENSCPOG00000037215 Naked mole-rat female MODERN SPECIES 22 ENSHGLG00000020241 ENSHGLG00000003241 KIF5C (ENSHGLG00000002894) EPC2 (ENSHGLG00000001526) ENSHGLG00000042407 ENSHGLG00000045749 MBD5 (ENSHGLG00000000588) ENSHGLG00000012065 ENSHGLG00000042968 ORC4 (ENSHGLG00000035874) ACVR2A (ENSHGLG00000046847) ENSHGLG00000036243 ENSHGLG00000043585 ENSHGLG00000033112 ENSHGLG00000007625 ZEB2 (ENSHGLG00000018878) #22 GTDC1 (ENSHGLG00000012745) #25 ARHGAP15 (ENSHGLG00000018323) #27 ENSHGLG00000005612 KYNU (ENSHGLG00000014874) #28 ENSHGLG00000009393 ENSHGLG00000042261 ENSHGLG00000045830 ENSHGLG00000047841 ENSHGLG00000015109 ENSHGLG00000015539 ENSHGLG00000035617 ENSHGLG00000039209 ENSHGLG00000009497 ENSHGLG00000046944 ENSHGLG00000038812 Sciuridae ANCESTRAL SPECIES 10 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00490000043329.a.a.a.k.a ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526.c.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 ENSGT00940000158559 Eurasian red squirrel MODERN SPECIES 12 RBM43 (ENSSVLG00005003593) ENSSVLG00005003570 RND3 (ENSSVLG00005003560) ENSSVLG00005003548 MMADHC (ENSSVLG00005003507) LYPD6 (ENSSVLG00005003472) LYPD6B (ENSSVLG00005003456) KIF5C (ENSSVLG00005003411) EPC2 (ENSSVLG00005003372) MBD5 (ENSSVLG00005003333) ORC4 (ENSSVLG00005003298) ACVR2A (ENSSVLG00005003270) ENSSVLG00005003233 ENSSVLG00005003222 ENSSVLG00005003208 #21 ENSSVLG00005003174 #22 GTDC1 (ENSSVLG00005003107) #25 ARHGAP15 (ENSSVLG00005003035) #27 KYNU (ENSSVLG00005002948) #28 ENSSVLG00005002904 LRP1B (ENSSVLG00005002708) NXPH2 (ENSSVLG00005002646) SPOPL (ENSSVLG00005002616) HNMT (ENSSVLG00005002599) THSD7B (ENSSVLG00005002439) CXCR4 (ENSSVLG00005002352) DARS1 (ENSSVLG00005002326) MCM6 (ENSSVLG00005002280) LCT (ENSSVLG00005002233) UBXN4 (ENSSVLG00005002201) ENSSVLG00005002116 Marmotini ANCESTRAL SPECIES 2 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00490000043329.a.a.a.k.a ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526.c.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT00390000016988.a.a.a.b.a.b ENSGT01050000244848.C.a ENSGT00950000182891.a.a.b.b ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 Marmotini_b ANCESTRAL SPECIES 10 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00490000043329.a.a.a.k.a ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526.c.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT00390000016988.a.a.a.b.a.b ENSGT01050000244848.C.a ENSGT00950000182891.a.a.b.b ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 Arctic ground squirrel MODERN SPECIES 3 RBM43 (ENSUPAG00010004382) ENSUPAG00010004388 ENSUPAG00010004396 RND3 (ENSUPAG00010004413) MMADHC (ENSUPAG00010004432) LYPD6 (ENSUPAG00010004464) LYPD6B (ENSUPAG00010004479) KIF5C (ENSUPAG00010004496) EPC2 (ENSUPAG00010004529) ENSUPAG00010004532 ENSUPAG00010004533 MBD5 (ENSUPAG00010004537) ORC4 (ENSUPAG00010004557) ACVR2A (ENSUPAG00010004582) ENSUPAG00010004608 ZEB2 (ENSUPAG00010004644) #22 GTDC1 (ENSUPAG00010004826) #25 ARHGAP15 (ENSUPAG00010004846) #27 KYNU (ENSUPAG00010004892) #28 LRP1B (ENSUPAG00010004938) ENSUPAG00010005063 ENSUPAG00010005074 NXPH2 (ENSUPAG00010005088) SPOPL (ENSUPAG00010005093) HNMT (ENSUPAG00010005103) THSD7B (ENSUPAG00010005115) ENSUPAG00010005155 CXCR4 (ENSUPAG00010005161) ENSUPAG00010005164 DARS1 (ENSUPAG00010005170) LCT (ENSUPAG00010005203) Squirrel MODERN SPECIES 69 RIF1 (ENSSTOG00000020712) TNFAIP6 (ENSSTOG00000016314) NMI (ENSSTOG00000028659) RBM43 (ENSSTOG00000016311) ENSSTOG00000021862 RND3 (ENSSTOG00000009798) MMADHC (ENSSTOG00000021576) LYPD6 (ENSSTOG00000029572) LYPD6B (ENSSTOG00000021300) KIF5C (ENSSTOG00000008408) EPC2 (ENSSTOG00000010468) MBD5 (ENSSTOG00000024028) ORC4 (ENSSTOG00000026092) ACVR2A (ENSSTOG00000025105) ENSSTOG00000032731 ZEB2 (ENSSTOG00000003811) #22 GTDC1 (ENSSTOG00000016373) #25 ARHGAP15 (ENSSTOG00000009312) #27 KYNU (ENSSTOG00000009286) #28 LRP1B (ENSSTOG00000002686) ENSSTOG00000031059 NXPH2 (ENSSTOG00000001587) SPOPL (ENSSTOG00000022722) HNMT (ENSSTOG00000010780) THSD7B (ENSSTOG00000002491) CXCR4 (ENSSTOG00000006334) ENSSTOG00000034891 DARS1 (ENSSTOG00000006292) MCM6 (ENSSTOG00000013639) LCT (ENSSTOG00000013618) UBXN4 (ENSSTOG00000007625) Alpin marmot MODERN SPECIES 5 ENSMMMG00000021776 ENSMMMG00000021771 ENSMMMG00000021752 RND3 (ENSMMMG00000021746) MMADHC (ENSMMMG00000021733) LYPD6 (ENSMMMG00000021723) LYPD6B (ENSMMMG00000021702) KIF5C (ENSMMMG00000021654) ENSMMMG00000021646 EPC2 (ENSMMMG00000021637) ENSMMMG00000021627 ENSMMMG00000021626 ENSMMMG00000021615 ENSMMMG00000021598 ACVR2A (ENSMMMG00000021587) ZEB2 (ENSMMMG00000021492) #22 GTDC1 (ENSMMMG00000021476) #25 ENSMMMG00000021461 ARHGAP15 (ENSMMMG00000021442) #27 KYNU (ENSMMMG00000021410) #28 LRP1B (ENSMMMG00000021313) NXPH2 (ENSMMMG00000021251) SPOPL (ENSMMMG00000021248) HNMT (ENSMMMG00000021232) THSD7B (ENSMMMG00000021210) ENSMMMG00000021196 CXCR4 (ENSMMMG00000021192) ENSMMMG00000021188 DARS1 (ENSMMMG00000021177) MCM6 (ENSMMMG00000021164) LCT (ENSMMMG00000021153) Rodentia_B ANCESTRAL SPECIES 12 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 Kangaroo rat MODERN SPECIES 445 Zeb2 (ENSDORG00000023390) #22 Gtdc1 (ENSDORG00000005149) #25 Arhgap15 (ENSDORG00000006610) #27 Kynu (ENSDORG00000015633) #28 ENSDORG00000025577 ENSDORG00000027686 Lrp1b (ENSDORG00000015070) ENSDORG00000029267 Nxph2 (ENSDORG00000027837) Spopl (ENSDORG00000028165) Hnmt (ENSDORG00000029599) Myomorpha ANCESTRAL SPECIES 10 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 Muroidea ANCESTRAL SPECIES 34 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT01100000263477.B.d.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT01100000263477.B.d.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159561 ENSGT00950000182943.kb.b.b.a.a.b ENSGT00950000182943.kb.b.b.a.a.a ENSGT00950000182943.kb.b.b.a.b ENSGT00950000182943.kb.b.a.b.a Cricetidae ANCESTRAL SPECIES 12 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT01100000263477.B.d.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159561 ENSGT00950000182943.kb.b.b.a.a.b ENSGT00950000182943.kb.b.b.a.a.a ENSGT00950000182943.kb.b.b.a.b ENSGT00950000182943.kb.b.a.b.a Cricetinae ANCESTRAL SPECIES 1 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159561 ENSGT00950000182943.kb.b.b.a.a.b ENSGT00950000182943.kb.b.b.a.a.a ENSGT00550000075010.i.a ENSGT00950000182943.kb.b.b.a.b Chinese hamster chok1gshd MODERN SPECIES 188 Tnfaip6 (ENSCGRG00001024845) Nmi (ENSCGRG00001000480) Rbm43 (ENSCGRG00001011129) ENSCGRG00001014515 Tas2r134 (ENSCGRG00001008402) Rnd3 (ENSCGRG00001018416) Mmadhc (ENSCGRG00001008423) Lypd6 (ENSCGRG00001009801) Lypd6b (ENSCGRG00001008503) Kif5c (ENSCGRG00001021373) Epc2 (ENSCGRG00001024568) Mbd5 (ENSCGRG00001001266) Orc4 (ENSCGRG00001001352) Acvr2a (ENSCGRG00001024754) ENSCGRG00001000890 Zeb2 (ENSCGRG00001003812) #22 ENSCGRG00001006690 #23 Gtdc1 (ENSCGRG00001014426) #25 ENSCGRG00001008381 Arhgap15 (ENSCGRG00001011371) #27 Kynu (ENSCGRG00001005556) #28 ENSCGRG00001012428 ENSCGRG00001009004 ENSCGRG00001024491 Nxph2 (ENSCGRG00001024840) Spopl (ENSCGRG00001010346) ENSCGRG00001008614 ENSCGRG00001024843 ENSCGRG00001001542 ENSCGRG00001009248 Tbpl2 (ENSCGRG00001015310) Golden Hamster MODERN SPECIES 633 Neb (ENSMAUG00000004953) Rif1 (ENSMAUG00000013158) Nmi (ENSMAUG00000011421) Rbm43 (ENSMAUG00000012908) Rnd3 (ENSMAUG00000011617) Mmadhc (ENSMAUG00000011028) Lypd6 (ENSMAUG00000009256) Lypd6b (ENSMAUG00000013712) Kif5c (ENSMAUG00000009793) ENSMAUG00000001219 ENSMAUG00000000214 Orc4 (ENSMAUG00000013801) Acvr2a (ENSMAUG00000018729) ENSMAUG00000017030 ENSMAUG00000016231 Zeb2 (ENSMAUG00000015393) #22 Gtdc1 (ENSMAUG00000001170) #25 Arhgap15 (ENSMAUG00000012165) #27 Kynu (ENSMAUG00000013067) #28 ENSMAUG00000009235 Lrp1b (ENSMAUG00000019371) ENSMAUG00000014547 Cricetidae_B ANCESTRAL SPECIES 7 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT01100000263477.B.d.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159561 ENSGT00950000182943.kb.b.b.a.a.b ENSGT00950000182943.kb.b.b.a.a.a ENSGT00950000182943.kb.b.b.a.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.b.a Northern American deer mouse MODERN SPECIES 17 Tas2r134 (ENSPEMG00000026859) Rnd3 (ENSPEMG00000030018) ENSPEMG00000028309 Mmadhc (ENSPEMG00000015462) Lypd6 (ENSPEMG00000030454) Lypd6b (ENSPEMG00000030753) Kif5c (ENSPEMG00000013456) Epc2 (ENSPEMG00000008844) Mbd5 (ENSPEMG00000012335) Orc4 (ENSPEMG00000013503) Acvr2a (ENSPEMG00000025982) ENSPEMG00000030197 ENSPEMG00000008317 ENSPEMG00000029306 ENSPEMG00000009353 Zeb2 (ENSPEMG00000004029) #22 Gtdc1 (ENSPEMG00000006747) #25 Arhgap15 (ENSPEMG00000008557) #27 Kynu (ENSPEMG00000011128) #28 ENSPEMG00000028178 ENSPEMG00000029273 ENSPEMG00000019536 Lrp1b (ENSPEMG00000019442) ENSPEMG00000030960 ENSPEMG00000027862 Nxph2 (ENSPEMG00000014216) Spopl (ENSPEMG00000024413) ENSPEMG00000029398 Hnmt (ENSPEMG00000016185) ENSPEMG00000030551 Tbpl2 (ENSPEMG00000018472) Prairie vole MODERN SPECIES 12 Neb (ENSMOCG00000022729) Rif1 (ENSMOCG00000009381) Tnfaip6 (ENSMOCG00000003915) ENSMOCG00000011562 Rbm43 (ENSMOCG00000007686) Rnd3 (ENSMOCG00000019178) Mmadhc (ENSMOCG00000012955) Lypd6 (ENSMOCG00000006453) Lypd6b (ENSMOCG00000020650) Kif5c (ENSMOCG00000001353) Epc2 (ENSMOCG00000003346) Mbd5 (ENSMOCG00000019347) Orc4 (ENSMOCG00000008587) Acvr2a (ENSMOCG00000001323) ENSMOCG00000007379 Zeb2 (ENSMOCG00000016943) #22 Gtdc1 (ENSMOCG00000022059) #25 Arhgap15 (ENSMOCG00000022212) #27 Kynu (ENSMOCG00000018120) #28 ENSMOCG00000021528 ENSMOCG00000020186 ENSMOCG00000001529 Lrp1b (ENSMOCG00000007280) ENSMOCG00000008295 ENSMOCG00000007029 Nxph2 (ENSMOCG00000003297) Spopl (ENSMOCG00000018403) Hnmt (ENSMOCG00000004456) Tbpl2 (ENSMOCG00000012483) Il36g (ENSMOCG00000018096) Il36a (ENSMOCG00000007131) Murinae ANCESTRAL SPECIES 1 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT01100000263477.B.d.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00550000074961 ENSGT00390000009566 ENSGT00940000153772.B ENSGT00940000158501 ENSGT00390000016384.f.f.e.a ENSGT00940000162358 ENSGT00940000157194 ENSGT00940000157936 ENSGT00940000153391.c.b.a ENSGT00940000157419 ENSGT00940000159990 Mus ANCESTRAL SPECIES 1 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT01100000263477.B.d.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00550000074961 ENSGT00390000009566 ENSGT00940000153772.B ENSGT00940000158501 ENSGT00390000016384.f.f.e.a ENSGT00940000162358 ENSGT00940000157194 ENSGT00940000157936 ENSGT00940000153391.c.b.a ENSGT00940000157419 ENSGT00940000159990 Mus_A ANCESTRAL SPECIES ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT01100000263477.B.d.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00550000074961 ENSGT00390000009566 ENSGT00940000153772.B ENSGT00940000158501 ENSGT00390000016384.f.f.e.a ENSGT00940000162358 ENSGT00940000157194 ENSGT00940000157936 ENSGT00940000153391.c.b.a ENSGT00940000157419 ENSGT00940000159990 Mus_B ANCESTRAL SPECIES 1 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT01100000263477.B.d.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00550000074961 ENSGT00390000009566 ENSGT00940000153772.B ENSGT00940000158501 ENSGT00390000016384.f.f.e.a ENSGT00940000162358 ENSGT00940000157194 ENSGT00940000157936 ENSGT00940000153391.c.b.a ENSGT00940000157419 ENSGT00940000159990 Mus_C ANCESTRAL SPECIES ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT01100000263477.B.d.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00390000012037.x ENSGT00550000074961 ENSGT00390000009566 ENSGT00940000153772.B ENSGT00940000158501 ENSGT00390000016384.f.f.e.a ENSGT00940000162358 ENSGT00940000157194 ENSGT00940000157936 ENSGT00940000153391.c.b.a ENSGT00940000157419 Steppe mouse MODERN SPECIES 3197 Zeb2 (ENSMSIG00000020240) #22 ENSMSIG00000020426 #23 ENSMSIG00000020429 Gtdc1 (ENSMSIG00000020444) #25 ENSMSIG00000020501 ENSMSIG00000020513 #27 spretus MODERN SPECIES 11 Rif1 (MGP_SPRETEiJ_G0024476) Tnfaip6 (MGP_SPRETEiJ_G0024475) Nmi (MGP_SPRETEiJ_G0024474) Rbm43 (MGP_SPRETEiJ_G0024473) Tas2r134 (MGP_SPRETEiJ_G0024472) Rnd3 (MGP_SPRETEiJ_G0024471) Mmadhc (MGP_SPRETEiJ_G0024470) Lypd6 (MGP_SPRETEiJ_G0024469) Lypd6b (MGP_SPRETEiJ_G0024468) Kif5c (MGP_SPRETEiJ_G0024467) Epc2 (MGP_SPRETEiJ_G0024466) MGP_SPRETEiJ_G0024465 Mbd5 (MGP_SPRETEiJ_G0024464) Orc4 (MGP_SPRETEiJ_G0024463) Acvr2a (MGP_SPRETEiJ_G0024462) Zeb2 (MGP_SPRETEiJ_G0024461) #22 Gtdc1 (MGP_SPRETEiJ_G0024460) #25 Arhgap15 (MGP_SPRETEiJ_G0024459) #27 Kynu (MGP_SPRETEiJ_G0024458) #28 Lrp1b (MGP_SPRETEiJ_G0024457) MGP_SPRETEiJ_G0024456 Ppp6c (MGP_SPRETEiJ_G0024455) Scai (MGP_SPRETEiJ_G0024454) Golga1 (MGP_SPRETEiJ_G0024453) Arpc5l (MGP_SPRETEiJ_G0024452) MGP_SPRETEiJ_G0024451 Wdr38 (MGP_SPRETEiJ_G0024450) Olfml2a (MGP_SPRETEiJ_G0024449) Nr6a1 (MGP_SPRETEiJ_G0024448) Nr5a1 (MGP_SPRETEiJ_G0024447) Psmb7 (MGP_SPRETEiJ_G0024446) Mouse MODERN SPECIES 11 Neb (ENSMUSG00000026950) Rif1 (ENSMUSG00000036202) Tnfaip6 (ENSMUSG00000053475) Nmi (ENSMUSG00000026946) Rbm43 (ENSMUSG00000036249) Tas2r134 (ENSMUSG00000056115) Rnd3 (ENSMUSG00000017144) Mmadhc (ENSMUSG00000026766) Lypd6 (ENSMUSG00000050447) Lypd6b (ENSMUSG00000026765) Kif5c (ENSMUSG00000026764) Epc2 (ENSMUSG00000069495) Mbd5 (ENSMUSG00000036792) Orc4 (ENSMUSG00000026761) Acvr2a (ENSMUSG00000052155) Zeb2 (ENSMUSG00000026872) #22 Gtdc1 (ENSMUSG00000036890) #25 Arhgap15 (ENSMUSG00000049744) #27 Kynu (ENSMUSG00000026866) #28 Lrp1b (ENSMUSG00000049252) Ppp6c (ENSMUSG00000026753) Scai (ENSMUSG00000035236) Golga1 (ENSMUSG00000026754) Arpc5l (ENSMUSG00000026755) Rpl35 (ENSMUSG00000062997) Wdr38 (ENSMUSG00000035295) Olfml2a (ENSMUSG00000046618) Nr6a1 (ENSMUSG00000063972) Nr5a1 (ENSMUSG00000026751) Psmb7 (ENSMUSG00000026750) Nek6 (ENSMUSG00000026749) Ryukyu mouse MODERN SPECIES 11 MGP_CAROLIEiJ_G0023556 Rif1 (MGP_CAROLIEiJ_G0023555) Tnfaip6 (MGP_CAROLIEiJ_G0023554) Nmi (MGP_CAROLIEiJ_G0023553) Rbm43 (MGP_CAROLIEiJ_G0023552) Tas2r134 (MGP_CAROLIEiJ_G0023551) Rnd3 (MGP_CAROLIEiJ_G0023550) Mmadhc (MGP_CAROLIEiJ_G0023549) Lypd6 (MGP_CAROLIEiJ_G0023548) Lypd6b (MGP_CAROLIEiJ_G0023547) Kif5c (MGP_CAROLIEiJ_G0023546) Epc2 (MGP_CAROLIEiJ_G0023545) Mbd5 (MGP_CAROLIEiJ_G0023544) Orc4 (MGP_CAROLIEiJ_G0023543) Acvr2a (MGP_CAROLIEiJ_G0023542) Zeb2 (MGP_CAROLIEiJ_G0023541) #22 Gtdc1 (MGP_CAROLIEiJ_G0023540) #25 Arhgap15 (MGP_CAROLIEiJ_G0023539) #27 MGP_CAROLIEiJ_G0023538 #28 Lrp1b (MGP_CAROLIEiJ_G0023537) MGP_CAROLIEiJ_G0023536 Ppp6c (MGP_CAROLIEiJ_G0023535) Scai (MGP_CAROLIEiJ_G0023534) Golga1 (MGP_CAROLIEiJ_G0023533) Arpc5l (MGP_CAROLIEiJ_G0023532) MGP_CAROLIEiJ_G0023531 Wdr38 (MGP_CAROLIEiJ_G0023530) Olfml2a (MGP_CAROLIEiJ_G0023529) Nr6a1 (MGP_CAROLIEiJ_G0023528) Nr5a1 (MGP_CAROLIEiJ_G0023527) Psmb7 (MGP_CAROLIEiJ_G0023526) Shrew mouse MODERN SPECIES 16 MGP_PahariEiJ_G0025007 Rif1 (MGP_PahariEiJ_G0025006) Tnfaip6 (MGP_PahariEiJ_G0025005) Nmi (MGP_PahariEiJ_G0025004) Rbm43 (MGP_PahariEiJ_G0025003) Tas2r134 (MGP_PahariEiJ_G0025002) Rnd3 (MGP_PahariEiJ_G0025001) Mmadhc (MGP_PahariEiJ_G0025000) Lypd6 (MGP_PahariEiJ_G0024999) Lypd6b (MGP_PahariEiJ_G0024998) Kif5c (MGP_PahariEiJ_G0024997) Epc2 (MGP_PahariEiJ_G0024996) Mbd5 (MGP_PahariEiJ_G0024995) Orc4 (MGP_PahariEiJ_G0024994) Acvr2a (MGP_PahariEiJ_G0024993) Zeb2 (MGP_PahariEiJ_G0024992) #22 Gtdc1 (MGP_PahariEiJ_G0024991) #25 Arhgap15 (MGP_PahariEiJ_G0024990) #27 Kynu (MGP_PahariEiJ_G0024989) #28 Lrp1b (MGP_PahariEiJ_G0024988) Ppp6c (MGP_PahariEiJ_G0024987) Scai (MGP_PahariEiJ_G0024986) Golga1 (MGP_PahariEiJ_G0024985) Arpc5l (MGP_PahariEiJ_G0024984) MGP_PahariEiJ_G0024983 Olfml2a (MGP_PahariEiJ_G0024982) Nr6a1 (MGP_PahariEiJ_G0024981) Nr5a1 (MGP_PahariEiJ_G0024980) Psmb7 (MGP_PahariEiJ_G0024979) Nek6 (MGP_PahariEiJ_G0024978) Lhx2 (MGP_PahariEiJ_G0024977) Rat MODERN SPECIES 13 Rnd3 (ENSRNOG00000004624) LOC499796 (ENSRNOG00000028112) Mmadhc (ENSRNOG00000004740) Hnrnpa1-ps20 (ENSRNOG00000005951) LOC120101547 (ENSRNOG00000048601) Lypd6 (ENSRNOG00000068044) Ns5atp4-ps3 (ENSRNOG00000027533) Lypd6b (ENSRNOG00000004614) Kif5c (ENSRNOG00000004680) Epc2 (ENSRNOG00000029447) Mbd5 (ENSRNOG00000027596) Orc4 (ENSRNOG00000005021) Acvr2a (ENSRNOG00000005334) ENSRNOG00000062624 ENSRNOG00000067798 Zeb2 (ENSRNOG00000004677) #22 Gtdc1 (ENSRNOG00000031038) #25 Arhgap15 (ENSRNOG00000031168) #27 Kynu (ENSRNOG00000029993) #28 Lrp1b (ENSRNOG00000030243) LOC100362366 (ENSRNOG00000028690) AABR07051831.1 (ENSRNOG00000015854) Ppp6c (ENSRNOG00000015145) Scai (ENSRNOG00000025278) Golga1 (ENSRNOG00000014493) Arpc5l (ENSRNOG00000014317) Rpl35 (ENSRNOG00000014272) Wdr38 (ENSRNOG00000014102) Olfml2a (ENSRNOG00000014034) Nr6a1 (ENSRNOG00000013232) Nr5a1 (ENSRNOG00000012682) Upper Galilee mountains blind mole rat MODERN SPECIES 1881 Tnfaip6 (ENSNGAG00000007671) ENSNGAG00000013509 Rbm43 (ENSNGAG00000016028) Tas2r134 (ENSNGAG00000015380) Rnd3 (ENSNGAG00000001477) ENSNGAG00000000384 ENSNGAG00000014803 Mmadhc (ENSNGAG00000008470) Lypd6 (ENSNGAG00000010779) Lypd6b (ENSNGAG00000012606) Kif5c (ENSNGAG00000020904) Epc2 (ENSNGAG00000015488) Mbd5 (ENSNGAG00000018784) Orc4 (ENSNGAG00000012001) Acvr2a (ENSNGAG00000020006) Zeb2 (ENSNGAG00000016618) #22 ENSNGAG00000000981 #23 Gtdc1 (ENSNGAG00000011627) #25 Arhgap15 (ENSNGAG00000003717) #27 Kynu (ENSNGAG00000015519) #28 ENSNGAG00000005556 Lrp1b (ENSNGAG00000000689) ENSNGAG00000009773 Lesser Egyptian jerboa MODERN SPECIES 46 Rbm43 (ENSJJAG00000000368) ENSJJAG00000011149 Rnd3 (ENSJJAG00000015179) ENSJJAG00000011930 ENSJJAG00000012494 Lypd6 (ENSJJAG00000020503) Lypd6b (ENSJJAG00000011004) ENSJJAG00000021666 Epc2 (ENSJJAG00000023818) Mbd5 (ENSJJAG00000023609) Orc4 (ENSJJAG00000011085) Acvr2a (ENSJJAG00000014798) ENSJJAG00000017205 ENSJJAG00000000614 ENSJJAG00000011334 Zeb2 (ENSJJAG00000015138) #22 ENSJJAG00000012093 Gtdc1 (ENSJJAG00000022232) #25 Arhgap15 (ENSJJAG00000002439) #27 Kynu (ENSJJAG00000011644) #28 ENSJJAG00000020358 Lrp1b (ENSJJAG00000022916) Nxph2 (ENSJJAG00000024187) Spopl (ENSJJAG00000008673) ENSJJAG00000019196 ENSJJAG00000017206 Hnmt (ENSJJAG00000021221) Sowahc (ENSJJAG00000016974) Septin10 (ENSJJAG00000013785) Sh3rf3 (ENSJJAG00000016244) Edar (ENSJJAG00000023368) Laurasiatheria ANCESTRAL SPECIES 12 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT01050000244986.b.b ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183208.A.c.a #22 Common shrew MODERN SPECIES 5031 ZEB2 (ENSSARG00000006858) #22 Hedgehog MODERN SPECIES 6466 ZEB2 (ENSEEUG00000005764) #22 Laurasiatheria_a ANCESTRAL SPECIES 16 ENSGT00390000012204 ENSGT00940000157201 ENSGT01090000260806 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Laurasiatheria_b ANCESTRAL SPECIES 16 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT01090000260806 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00910000147617 ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Laurasiatheria_c ANCESTRAL SPECIES 18 ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00910000147897 #24 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 Equus ANCESTRAL SPECIES 18 ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01030000234916 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00390000000805.h ENSGT00940000155324 ENSGT00940000160205 Horse MODERN SPECIES 9 NMI (ENSECAG00000006801) RBM43 (ENSECAG00000000566) RND3 (ENSECAG00000021310) MMADHC (ENSECAG00000014503) LYPD6 (ENSECAG00000014321) LYPD6B (ENSECAG00000013932) KIF5C (ENSECAG00000013822) EPC2 (ENSECAG00000010930) ENSECAG00000008805 ENSECAG00000056446 ENSECAG00000055420 MBD5 (ENSECAG00000024839) ORC4 (ENSECAG00000013910) ACVR2A (ENSECAG00000000138) ENSECAG00000039452 ZEB2 (ENSECAG00000019355) #22 GTDC1 (ENSECAG00000014136) #25 ARHGAP15 (ENSECAG00000012312) #27 KYNU (ENSECAG00000018188) #28 ENSECAG00000052918 LRP1B (ENSECAG00000012212) NXPH2 (ENSECAG00000023822) SPOPL (ENSECAG00000013631) ENSECAG00000031440 HNMT (ENSECAG00000011592) THSD7B (ENSECAG00000007595) CXCR4 (ENSECAG00000003837) DARS1 (ENSECAG00000024197) MCM6 (ENSECAG00000008840) ENSECAG00000007662 LCT (ENSECAG00000018594) Donkey MODERN SPECIES 24 NMI (ENSEASG00005023440) RBM43 (ENSEASG00005033269) RND3 (ENSEASG00005038021) MMADHC (ENSEASG00005023444) LYPD6 (ENSEASG00005023445) LYPD6B (ENSEASG00005032417) KIF5C (ENSEASG00005023448) EPC2 (ENSEASG00005023449) MBD5 (ENSEASG00005023450) ORC4 (ENSEASG00005023452) ACVR2A (ENSEASG00005023453) ENSEASG00005033216 ENSEASG00005023460 #21 ENSEASG00005023463 ENSEASG00005024596 ZEB2 (ENSEASG00005030252) #22 GTDC1 (ENSEASG00005023470) #25 ARHGAP15 (ENSEASG00005023473) #27 KYNU (ENSEASG00005023479) #28 LRP1B (ENSEASG00005023483) NXPH2 (ENSEASG00005034518) SPOPL (ENSEASG00005007329) ENSEASG00005026069 HNMT (ENSEASG00005007333) THSD7B (ENSEASG00005007338) CXCR4 (ENSEASG00005007346) DARS1 (ENSEASG00005007349) ENSEASG00005034643 MCM6 (ENSEASG00005007355) ENSEASG00005007359 LCT (ENSEASG00005007363) Chiroptera ANCESTRAL SPECIES 11 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00910000147897 #24 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 Microchiroptera ANCESTRAL SPECIES 15 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00910000147897 #24 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 Greater horseshoe bat MODERN SPECIES 26 NMI (ENSRFEG00010004983) RBM43 (ENSRFEG00010004990) RND3 (ENSRFEG00010005000) ENSRFEG00010005006 MMADHC (ENSRFEG00010005008) LYPD6 (ENSRFEG00010005018) ENSRFEG00010005025 LYPD6B (ENSRFEG00010005029) KIF5C (ENSRFEG00010005056) EPC2 (ENSRFEG00010005117) MBD5 (ENSRFEG00010005157) ORC4 (ENSRFEG00010005186) ACVR2A (ENSRFEG00010005214) ENSRFEG00010005235 #21 ENSRFEG00010005242 ZEB2 (ENSRFEG00010005264) #22 ENSRFEG00010005283 #24 GTDC1 (ENSRFEG00010005310) #25 ARHGAP15 (ENSRFEG00010005362) #27 KYNU (ENSRFEG00010005399) #28 LRP1B (ENSRFEG00010005535) ENSRFEG00010005820 ENSRFEG00010005852 NXPH2 (ENSRFEG00010005863) SPOPL (ENSRFEG00010005880) ENSRFEG00010005902 HNMT (ENSRFEG00010005923) THSD7B (ENSRFEG00010005956) ENSRFEG00010005984 CXCR4 (ENSRFEG00010006005) ENSRFEG00010006026 Microbat MODERN SPECIES 969 LYPD6B (ENSMLUG00000008315) ENSMLUG00000026022 KIF5C (ENSMLUG00000010012) EPC2 (ENSMLUG00000009992) MBD5 (ENSMLUG00000000267) ORC4 (ENSMLUG00000006494) ACVR2A (ENSMLUG00000006484) ENSMLUG00000026714 ZEB2 (ENSMLUG00000002019) #22 GTDC1 (ENSMLUG00000014148) #25 ARHGAP15 (ENSMLUG00000014137) #27 KYNU (ENSMLUG00000003786) #28 ENSMLUG00000029515 ENSMLUG00000029943 ENSMLUG00000024376 LRP1B (ENSMLUG00000015421) ENSMLUG00000022624 ENSMLUG00000030705 ENSMLUG00000022752 ENSMLUG00000028361 ENSMLUG00000030235 NXPH2 (ENSMLUG00000000318) SPOPL (ENSMLUG00000000315) Megabat MODERN SPECIES 2953 ZEB2 (ENSPVAG00000015557) #22 GTDC1 (ENSPVAG00000015556) #25 ARHGAP15 (ENSPVAG00000015555) #27 Carnivora ANCESTRAL SPECIES 17 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT01090000260806 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00910000147617 ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Felidae ANCESTRAL SPECIES 15 ENSGT00910000144227.s.b ENSGT00940000157201 ENSGT01090000260806 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 Panthera ANCESTRAL SPECIES 9 ENSGT01050000246169 ENSGT00910000144227.s.b ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00910000147617 ENSGT00390000008903.m.a.a.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Panthera_a ANCESTRAL SPECIES 6 ENSGT00910000144227.s.b ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00940000159225.f ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00910000147617 ENSGT00390000008903.m.a.a.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 leopard MODERN SPECIES 1 RND3 (ENSPPRG00000007409) ENSPPRG00000007620 ENSPPRG00000008539 LYPD6 (ENSPPRG00000008921) LYPD6B (ENSPPRG00000009609) ENSPPRG00000009816 KIF5C (ENSPPRG00000009950) EPC2 (ENSPPRG00000010357) ENSPPRG00000016642 MBD5 (ENSPPRG00000011397) ORC4 (ENSPPRG00000012919) ACVR2A (ENSPPRG00000013771) ENSPPRG00000016836 ENSPPRG00000016855 #21 ENSPPRG00000016894 ZEB2 (ENSPPRG00000023971) #22 GTDC1 (ENSPPRG00000002408) #25 ARHGAP15 (ENSPPRG00000003769) #27 KYNU (ENSPPRG00000004587) #28 LRP1B (ENSPPRG00000009154) ENSPPRG00000017355 ENSPPRG00000017377 ENSPPRG00000012169 NXPH2 (ENSPPRG00000012365) SPOPL (ENSPPRG00000013080) HNMT (ENSPPRG00000013385) THSD7B (ENSPPRG00000024481) CXCR4 (ENSPPRG00000024427) DARS1 (ENSPPRG00000024294) MCM6 (ENSPPRG00000023335) LCT (ENSPPRG00000022850) lion MODERN SPECIES 8 NMI (ENSPLOG00000022481) RBM43 (ENSPLOG00000022483) RND3 (ENSPLOG00000022487) ENSPLOG00000022492 LYPD6 (ENSPLOG00000022514) LYPD6B (ENSPLOG00000022518) KIF5C (ENSPLOG00000022528) EPC2 (ENSPLOG00000022534) MBD5 (ENSPLOG00000022542) ENSPLOG00000022549 ORC4 (ENSPLOG00000022553) ACVR2A (ENSPLOG00000004697) ENSPLOG00000004702 ENSPLOG00000004716 #21 ENSPLOG00000004721 ZEB2 (ENSPLOG00000004758) #22 GTDC1 (ENSPLOG00000004848) #25 ARHGAP15 (ENSPLOG00000004919) #27 KYNU (ENSPLOG00000004977) #28 ENSPLOG00000005011 LRP1B (ENSPLOG00000005161) ENSPLOG00000005421 NXPH2 (ENSPLOG00000005437) SPOPL (ENSPLOG00000005460) HNMT (ENSPLOG00000005608) THSD7B (ENSPLOG00000005685) ENSPLOG00000005928 ENSPLOG00000005948 ENSPLOG00000005961 CXCR4 (ENSPLOG00000005971) DARS1 (ENSPLOG00000006015) Tiger MODERN SPECIES 243 ENSPTIG00000015310 #21 ENSPTIG00000009533 ZEB2 (ENSPTIG00000015892) #22 GTDC1 (ENSPTIG00000017004) #25 ARHGAP15 (ENSPTIG00000018060) #27 KYNU (ENSPTIG00000018174) #28 LRP1B (ENSPTIG00000018986) ENSPTIG00000009550 ENSPTIG00000009554 NXPH2 (ENSPTIG00000009560) SPOPL (ENSPTIG00000020249) HNMT (ENSPTIG00000020321) THSD7B (ENSPTIG00000020413) CXCR4 (ENSPTIG00000021235) Cat MODERN SPECIES 239 TNFAIP6 (ENSFCAG00000027956) ENSFCAG00000053166 NMI (ENSFCAG00000008426) RBM43 (ENSFCAG00000046232) RND3 (ENSFCAG00000023508) MMADHC (ENSFCAG00000005210) LYPD6 (ENSFCAG00000038369) LYPD6B (ENSFCAG00000013261) KIF5C (ENSFCAG00000025089) EPC2 (ENSFCAG00000023979) MBD5 (ENSFCAG00000028925) ORC4 (ENSFCAG00000029890) ACVR2A (ENSFCAG00000023845) ENSFCAG00000037177 #21 ENSFCAG00000022964 ZEB2 (ENSFCAG00000015532) #22 GTDC1 (ENSFCAG00000012314) #25 ARHGAP15 (ENSFCAG00000011613) #27 KYNU (ENSFCAG00000018501) #28 LRP1B (ENSFCAG00000026584) NXPH2 (ENSFCAG00000039021) SPOPL (ENSFCAG00000040800) HNMT (ENSFCAG00000022918) THSD7B (ENSFCAG00000013556) CXCR4 (ENSFCAG00000015575) DARS1 (ENSFCAG00000014295) MCM6 (ENSFCAG00000013595) LCT (ENSFCAG00000009430) UBXN4 (ENSFCAG00000031029) R3HDM1 (ENSFCAG00000027113) ZRANB3 (ENSFCAG00000024830) Caniformia ANCESTRAL SPECIES 14 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Canidae ANCESTRAL SPECIES 56 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00390000007539.i.b.a.db.b.b ENSGT00940000157541 ENSGT00390000009819.a.b.b ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Canis_lupus ANCESTRAL SPECIES 46 ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00390000007539.i.b.a.db.b.b ENSGT00940000157541 ENSGT00390000009819.a.b.b ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00940000153430.a.b.m.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 Dog MODERN SPECIES 10 NMI (ENSCAFG00845008371) ENSCAFG00845008302 RND3 (ENSCAFG00845008171) ENSCAFG00845008096 MMADHC (ENSCAFG00845007815) LYPD6 (ENSCAFG00845007742) LYPD6B (ENSCAFG00845007654) KIF5C (ENSCAFG00845007529) ENSCAFG00845007463 EPC2 (ENSCAFG00845007263) ENSCAFG00845007155 MBD5 (ENSCAFG00845006841) ENSCAFG00845006609 ORC4 (ENSCAFG00845006436) ACVR2A (ENSCAFG00845006266) ZEB2 (ENSCAFG00845006084) #22 GTDC1 (ENSCAFG00845013883) #25 ARHGAP15 (ENSCAFG00845013638) #27 KYNU (ENSCAFG00845013520) #28 ENSCAFG00845013470 ENSCAFG00845013421 ENSCAFG00845013405 LRP1B (ENSCAFG00845011094) NXPH2 (ENSCAFG00845010560) SPOPL (ENSCAFG00845010518) HNMT (ENSCAFG00845010412) THSD7B (ENSCAFG00845010239) ENSCAFG00845010172 DARS1 (ENSCAFG00845010085) MCM6 (ENSCAFG00845009951) LCT (ENSCAFG00845009807) Dingo MODERN SPECIES 101 ENSCAFG00020016388 RND3 (ENSCAFG00020016386) ENSCAFG00020016382 MMADHC (ENSCAFG00020016380) LYPD6 (ENSCAFG00020016377) ENSCAFG00020016375 ENSCAFG00020016369 KIF5C (ENSCAFG00020016358) ENSCAFG00020016356 EPC2 (ENSCAFG00020016353) MBD5 (ENSCAFG00020016351) ENSCAFG00020016350 ENSCAFG00020016348 ORC4 (ENSCAFG00020016340) ACVR2A (ENSCAFG00020016337) ZEB2 (ENSCAFG00020016311) #22 ENSCAFG00020016307 #23 GTDC1 (ENSCAFG00020016302) #25 ARHGAP15 (ENSCAFG00020016269) #27 KYNU (ENSCAFG00020016256) #28 ENSCAFG00020016252 LRP1B (ENSCAFG00020016211) ENSCAFG00020016205 NXPH2 (ENSCAFG00020016197) SPOPL (ENSCAFG00020016186) HNMT (ENSCAFG00020016185) THSD7B (ENSCAFG00020016172) CXCR4 (ENSCAFG00020016170) DARS1 (ENSCAFG00020016165) MCM6 (ENSCAFG00020016161) LCT (ENSCAFG00020016158) Red fox MODERN SPECIES 68 RIF1 (ENSVVUG00000011293) TNFAIP6 (ENSVVUG00000011234) NMI (ENSVVUG00000011210) ENSVVUG00000011201 ENSVVUG00000011159 RND3 (ENSVVUG00000011125) ENSVVUG00000011106 MMADHC (ENSVVUG00000011072) LYPD6 (ENSVVUG00000011061) LYPD6B (ENSVVUG00000011026) KIF5C (ENSVVUG00000010993) EPC2 (ENSVVUG00000010983) MBD5 (ENSVVUG00000010972) ORC4 (ENSVVUG00000010947) ACVR2A (ENSVVUG00000010940) ZEB2 (ENSVVUG00000010869) #22 ENSVVUG00000010866 #23 GTDC1 (ENSVVUG00000010792) #25 ARHGAP15 (ENSVVUG00000010769) #27 KYNU (ENSVVUG00000010732) #28 ENSVVUG00000010703 Caniformia_b ANCESTRAL SPECIES 13 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 Ursidae ANCESTRAL SPECIES 7 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000008783.ab.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 Ursus ANCESTRAL SPECIES 162 ENSGT00390000008783.ab.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 American black bear MODERN SPECIES 585 ZEB2 (ENSUAMG00000026838) #22 Polar bear MODERN SPECIES 196 ENSUMAG00000006470 ORC4 (ENSUMAG00000006461) ACVR2A (ENSUMAG00000006456) ENSUMAG00000006441 ZEB2 (ENSUMAG00000006420) #22 GTDC1 (ENSUMAG00000006399) #25 ARHGAP15 (ENSUMAG00000006377) #27 KYNU (ENSUMAG00000006355) #28 ENSUMAG00000006341 ENSUMAG00000006335 LRP1B (ENSUMAG00000006142) NXPH2 (ENSUMAG00000006056) SPOPL (ENSUMAG00000006049) HNMT (ENSUMAG00000006034) THSD7B (ENSUMAG00000005964) CXCR4 (ENSUMAG00000005945) DARS1 (ENSUMAG00000005942) MCM6 (ENSUMAG00000005636) LCT (ENSUMAG00000005573) UBXN4 (ENSUMAG00000005565) Giant Panda MODERN SPECIES 11 NEB (ENSAMEG00000008502) RIF1 (ENSAMEG00000008461) TNFAIP6 (ENSAMEG00000013023) NMI (ENSAMEG00000013032) ENSAMEG00000028408 RND3 (ENSAMEG00000025053) ENSAMEG00000006500 LYPD6 (ENSAMEG00000027368) LYPD6B (ENSAMEG00000004593) KIF5C (ENSAMEG00000004598) EPC2 (ENSAMEG00000004689) ENSAMEG00000019708 MBD5 (ENSAMEG00000004750) ORC4 (ENSAMEG00000013398) ACVR2A (ENSAMEG00000013434) ZEB2 (ENSAMEG00000009337) #22 ENSAMEG00000028035 #23 GTDC1 (ENSAMEG00000013100) #25 ARHGAP15 (ENSAMEG00000013114) #27 KYNU (ENSAMEG00000013126) #28 ENSAMEG00000012519 LRP1B (ENSAMEG00000012450) NXPH2 (ENSAMEG00000015387) SPOPL (ENSAMEG00000002595) THSD7B (ENSAMEG00000014390) CXCR4 (ENSAMEG00000019163) DARS1 (ENSAMEG00000005881) MCM6 (ENSAMEG00000005841) LCT (ENSAMEG00000005800) UBXN4 (ENSAMEG00000003672) R3HDM1 (ENSAMEG00000014886) Mustelinae ANCESTRAL SPECIES 21 ENSGT00390000016619.a ENSGT00940000156472 ENSGT00940000155163.b ENSGT00390000005923 ENSGT00940000160909 ENSGT00680000100018.a.a.a ENSGT00390000015818.f ENSGT00940000158361 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 Ferret MODERN SPECIES 222 ZNF804A (ENSMPUG00000018429) FSIP2 (ENSMPUG00000003504) ZC3H15 (ENSMPUG00000003521) ITGAV (ENSMPUG00000003529) LYPD6 (ENSMPUG00000003548) ENSMPUG00000018430 LYPD6B (ENSMPUG00000003554) KIF5C (ENSMPUG00000003561) EPC2 (ENSMPUG00000003574) MBD5 (ENSMPUG00000003584) ORC4 (ENSMPUG00000003591) ACVR2A (ENSMPUG00000003611) ZEB2 (ENSMPUG00000003620) #22 GTDC1 (ENSMPUG00000003633) #25 ENSMPUG00000003639 ENSMPUG00000003641 ENSMPUG00000003644 ARHGAP15 (ENSMPUG00000003680) #27 KYNU (ENSMPUG00000003685) #28 ENSMPUG00000003691 ENSMPUG00000003699 American mink MODERN SPECIES 39 FSIP2 (ENSNVIG00000004537) ZC3H15 (ENSNVIG00000004514) ITGAV (ENSNVIG00000004279) LYPD6 (ENSNVIG00000004251) LYPD6B (ENSNVIG00000004225) KIF5C (ENSNVIG00000004193) EPC2 (ENSNVIG00000004154) MBD5 (ENSNVIG00000004103) ORC4 (ENSNVIG00000004006) ACVR2A (ENSNVIG00000003978) ZEB2 (ENSNVIG00000003880) #22 GTDC1 (ENSNVIG00000003831) #25 RHG15 (ENSNVIG00000003755) #27 KYNU (ENSNVIG00000003686) #28 ENSNVIG00000003668 Artiodactyla ANCESTRAL SPECIES 13 ENSGT00940000157201 ENSGT01090000260806 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00960000193288 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 Suina ANCESTRAL SPECIES 48 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT01090000260806 ENSGT00530000063686.a.a ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000170936 ENSGT00940000160205 Pig MODERN SPECIES 6 TNFAIP6 (ENSSSCG00000023716) NMI (ENSSSCG00000022011) ENSSSCG00000060497 ENSSSCG00000047930 RND3 (ENSSSCG00000040445) ENSSSCG00000050050 MMADHC (ENSSSCG00000028646) LYPD6 (ENSSSCG00000023627) LYPD6B (ENSSSCG00000015677) KIF5C (ENSSSCG00000022919) EPC2 (ENSSSCG00000027211) MBD5 (ENSSSCG00000015667) ORC4 (ENSSSCG00000015668) ACVR2A (ENSSSCG00000015669) ENSSSCG00000053606 ENSSSCG00000021343 #22 GTDC1 (ENSSSCG00000015670) #25 ARHGAP15 (ENSSSCG00000015671) #27 ENSSSCG00000043635 ENSSSCG00000052768 ENSSSCG00000045622 KYNU (ENSSSCG00000015673) #28 ENSSSCG00000050181 LRP1B (ENSSSCG00000023746) ENSSSCG00000043342 NXPH2 (ENSSSCG00000040715) SPOPL (ENSSSCG00000032198) ENSSSCG00000041316 ENSSSCG00000046078 HNMT (ENSSSCG00000035195) THSD7B (ENSSSCG00000040172) Chacoan peccary MODERN SPECIES 130 NEB (ENSCWAG00000015808) RIF1 (ENSCWAG00000017662) TNFAIP6 (ENSCWAG00000017746) ENSCWAG00000017775 NMI (ENSCWAG00000017794) RND3 (ENSCWAG00000017833) MMADHC (ENSCWAG00000017904) LYPD6 (ENSCWAG00000017934) LYPD6B (ENSCWAG00000017971) KIF5C (ENSCWAG00000018100) EPC2 (ENSCWAG00000018158) MBD5 (ENSCWAG00000018269) ORC4 (ENSCWAG00000018425) ACVR2A (ENSCWAG00000018473) ENSCWAG00000018510 ZEB2 (ENSCWAG00000018538) #22 ENSCWAG00000018682 #23 GTDC1 (ENSCWAG00000018711) #25 ARHGAP15 (ENSCWAG00000018864) #27 KYNU (ENSCWAG00000018949) #28 LRP1B (ENSCWAG00000019047) NXPH2 (ENSCWAG00000019401) SPOPL (ENSCWAG00000019425) HNMT (ENSCWAG00000019443) THSD7B (ENSCWAG00000019475) ENSCWAG00000019657 CXCR4 (ENSCWAG00000019662) DARS1 (ENSCWAG00000019676) MCM6 (ENSCWAG00000019730) ENSCWAG00000019773 ENSCWAG00000019811 Artiodactyla_a ANCESTRAL SPECIES 13 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 Camelidae ANCESTRAL SPECIES 16 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 ENSGT00940000158559 Arabian camel MODERN SPECIES 31 ENSCDRG00005021387 NMI (ENSCDRG00005021380) RBM43 (ENSCDRG00005021377) RND3 (ENSCDRG00005021370) ENSCDRG00005021367 MMADHC (ENSCDRG00005021361) LYPD6 (ENSCDRG00005021357) LYPD6B (ENSCDRG00005021351) KIF5C (ENSCDRG00005021347) EPC2 (ENSCDRG00005021337) MBD5 (ENSCDRG00005021329) ORC4 (ENSCDRG00005021323) ACVR2A (ENSCDRG00005021318) ENSCDRG00005021315 ENSCDRG00005021311 #21 ZEB2 (ENSCDRG00005021107) #22 GTDC1 (ENSCDRG00005021037) #25 ARHGAP15 (ENSCDRG00005021017) #27 KYNU (ENSCDRG00005021006) #28 LRP1B (ENSCDRG00005019331) NXPH2 (ENSCDRG00005019171) ENSCDRG00005019157 SPOPL (ENSCDRG00005019127) HNMT (ENSCDRG00005019111) THSD7B (ENSCDRG00005018936) CXCR4 (ENSCDRG00005018891) DARS1 (ENSCDRG00005018847) MCM6 (ENSCDRG00005018797) LCT (ENSCDRG00005018741) UBXN4 (ENSCDRG00005018623) R3HDM1 (ENSCDRG00005018316) Alpaca MODERN SPECIES 1864 ZEB2 (ENSVPAG00000002128) #22 Artiodactyla_b ANCESTRAL SPECIES 12 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 Pecora ANCESTRAL SPECIES 24 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Yarkand deer MODERN SPECIES 26 RIF1 (ENSCHYG00000025435) TNFAIP6 (ENSCHYG00000025495) NMI (ENSCHYG00000025513) RBM43 (ENSCHYG00000025543) ENSCHYG00000025571 RND3 (ENSCHYG00000025578) MMADHC (ENSCHYG00000025604) ENSCHYG00000025627 LYPD6B (ENSCHYG00000025655) KIF5C (ENSCHYG00000008710) EPC2 (ENSCHYG00000008812) MBD5 (ENSCHYG00000009045) ORC4 (ENSCHYG00000009235) ACVR2A (ENSCHYG00000009478) ENSCHYG00000009591 ZEB2 (ENSCHYG00000009791) #22 GTDC1 (ENSCHYG00000010152) #25 ARHGAP15 (ENSCHYG00000010616) #27 KYNU (ENSCHYG00000010703) #28 LRP1B (ENSCHYG00000010870) ENSCHYG00000011576 NXPH2 (ENSCHYG00000011648) SPOPL (ENSCHYG00000011681) ENSCHYG00000011854 HNMT (ENSCHYG00000011885) THSD7B (ENSCHYG00000011983) ENSCHYG00000012320 ENSCHYG00000012343 CXCR4 (ENSCHYG00000012367) DARS1 (ENSCHYG00000012423) MCM6 (ENSCHYG00000012811) Percora_a ANCESTRAL SPECIES 5 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00390000017443.k.a ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Siberian musk deer MODERN SPECIES 346 ENSMMSG00000018486 RND3 (ENSMMSG00000018506) MMADHC (ENSMMSG00000018547) LYPD6 (ENSMMSG00000018611) LYPD6B (ENSMMSG00000018636) KIF5C (ENSMMSG00000018662) EPC2 (ENSMMSG00000018790) ENSMMSG00000018886 MBD5 (ENSMMSG00000019026) ENSMMSG00000019093 ORC4 (ENSMMSG00000019167) ACVR2A (ENSMMSG00000019227) ENSMMSG00000019266 ENSMMSG00000019276 ENSMMSG00000019314 ZEB2 (ENSMMSG00000019357) #22 ENSMMSG00000019525 #23 GTDC1 (ENSMMSG00000019550) #25 ARHGAP15 (ENSMMSG00000019673) #27 KYNU (ENSMMSG00000019754) #28 ENSMMSG00000019836 LRP1B (ENSMMSG00000019882) ENSMMSG00000020194 ENSMMSG00000020212 ENSMMSG00000020234 ENSMMSG00000020252 NXPH2 (ENSMMSG00000020261) SPOPL (ENSMMSG00000020288) HNMT (ENSMMSG00000020352) ENSMMSG00000020372 THSD7B (ENSMMSG00000020400) Bovidae ANCESTRAL SPECIES 8 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00940000153272.a.b.z.a.a.a.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00390000017443.k.a ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Caprinae ANCESTRAL SPECIES 5 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541.c ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00940000153272.a.b.z.a.a.a.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00390000017443.k.a ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Goat MODERN SPECIES 11 RBM43 (ENSCHIG00000019526) RND3 (ENSCHIG00000022258) ENSCHIG00000010348 ENSCHIG00000020042 MMADHC (ENSCHIG00000026029) LYPD6 (ENSCHIG00000018947) ENSCHIG00000026876 LYPD6B (ENSCHIG00000014675) KIF5C (ENSCHIG00000012226) EPC2 (ENSCHIG00000024313) MBD5 (ENSCHIG00000008638) ORC4 (ENSCHIG00000023781) ACVR2A (ENSCHIG00000013353) ENSCHIG00000026414 ENSCHIG00000012606 #21 ZEB2 (ENSCHIG00000020961) #22 GTDC1 (ENSCHIG00000022649) #25 ARHGAP15 (ENSCHIG00000014079) #27 ENSCHIG00000024301 #27 KYNU (ENSCHIG00000025717) #28 ENSCHIG00000024840 LRP1B (ENSCHIG00000012788) ENSCHIG00000015461 ENSCHIG00000024934 NXPH2 (ENSCHIG00000014059) SPOPL (ENSCHIG00000020853) HNMT (ENSCHIG00000010212) ENSCHIG00000004822 THSD7B (ENSCHIG00000014355) CXCR4 (ENSCHIG00000013798) DARS1 (ENSCHIG00000011050) Rambouillet Sheep MODERN SPECIES 11 RIF1 (ENSOARG00020024396) TNFAIP6 (ENSOARG00020024645) NMI (ENSOARG00020024663) RBM43 (ENSOARG00020024693) ENSOARG00020024716 ENSOARG00020024723 RND3 (ENSOARG00020024731) MMADHC (ENSOARG00020024756) LYPD6 (ENSOARG00020024772) LYPD6B (ENSOARG00020024784) KIF5C (ENSOARG00020024809) EPC2 (ENSOARG00020024888) MBD5 (ENSOARG00020024911) ORC4 (ENSOARG00020024976) ACVR2A (ENSOARG00020025027) ZEB2 (ENSOARG00020025087) #22 ARHGAP15 (ENSOARG00020025262) #27 KYNU (ENSOARG00020005939) #28 LRP1B (ENSOARG00020006148) ENSOARG00020011176 NXPH2 (ENSOARG00020011226) SPOPL (ENSOARG00020011256) ENSOARG00020011354 HNMT (ENSOARG00020011495) ENSOARG00020011562 THSD7B (ENSOARG00020011585) ENSOARG00020012007 CXCR4 (ENSOARG00020012040) DARS1 (ENSOARG00020012080) MCM6 (ENSOARG00020012369) LCT (ENSOARG00020012566) Bovinae ANCESTRAL SPECIES 5 ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT01100000264677 ENSGT00390000016542 ENSGT00940000157233 ENSGT00510000047245.w.a.b ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00940000153272.a.b.z.a.a.a.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00950000183123.g.a.a.b.fb.b ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 American bison MODERN SPECIES 3244 ZEB2 (ENSBBBG00000012207) #22 GTDC1 (ENSBBBG00000001921) #25 ARHGAP15 (ENSBBBG00000012328) #27 KYNU (ENSBBBG00000012350) #28 ENSBBBG00000002337 LRP1B (ENSBBBG00000012403) ENSBBBG00000012412 NXPH2 (ENSBBBG00000012418) SPOPL (ENSBBBG00000012429) ENSBBBG00000002376 HNMT (ENSBBBG00000002381) HNRNPA1L2 (ENSBBBG00000002385) THSD7B (ENSBBBG00000012491) CXCR4 (ENSBBBG00000012508) DARS1 (ENSBBBG00000002399) ENSBBBG00000012538 Bos ANCESTRAL SPECIES 6 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT01100000264677 ENSGT00390000016542 ENSGT00940000157233 ENSGT00510000047245.w.a.b ENSGT00940000154940.fb.b ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00940000153272.a.b.z.a.a.a.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00950000183123.g.a.a.b.fb.b ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Bos_a ANCESTRAL SPECIES 4 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00940000154940.fb.b ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00940000153272.a.b.z.a.a.a.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00950000183123.g.a.a.b.fb.b ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Domestic yak MODERN SPECIES 11 ENSBGRG00000005845 RBM43 (ENSBGRG00000005796) FAM98B (ENSBGRG00000005761) RND3 (ENSBGRG00000005710) MMADHC (ENSBGRG00000005641) LYPD6 (ENSBGRG00000005614) LYPD6B (ENSBGRG00000005574) ENSBGRG00000005565 KIF5C (ENSBGRG00000005336) EPC2 (ENSBGRG00000005242) MBD5 (ENSBGRG00000005195) ENSBGRG00000005171 ORC4 (ENSBGRG00000005070) ACVR2A (ENSBGRG00000004989) ENSBGRG00000004949 ZEB2 (ENSBGRG00000004703) #22 GTDC1 (ENSBGRG00000004374) #25 ENSBGRG00000004340 ARHGAP15 (ENSBGRG00000004300) #27 KYNU (ENSBGRG00000004206) #28 ENSBGRG00000004192 LRP1B (ENSBGRG00000001782) ENSBGRG00000001517 NXPH2 (ENSBGRG00000001512) SPOPL (ENSBGRG00000001482) ENSBGRG00000001471 ENSBGRG00000001465 ENSBGRG00000001460 HNMT (ENSBGRG00000001443) ENSBGRG00000001431 THSD7B (ENSBGRG00000001374) Wild yak MODERN SPECIES 343 ENSBMUG00000025323 ZEB2 (ENSBMUG00000025345) #22 Bos_b ANCESTRAL SPECIES 3 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT01100000264677 ENSGT00390000016542 ENSGT00940000157233 ENSGT00510000047245.w.a.b ENSGT00940000154940.fb.b ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000154276.jb.a.a.a.a.a.a.b.a.a.b.b ENSGT00900000142862 ENSGT00940000157521.b ENSGT00940000158921.f.a ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00510000047559.d.a ENSGT00940000159262 ENSGT00950000183123.g.a.a.b.fb.b ENSGT01050000244848.C.a ENSGT01030000234618.F Hybrid Bos Indicus MODERN SPECIES 11 RBM43 (ENSBIXG00005017876) RND3 (ENSBIXG00005017847) MMADHC (ENSBIXG00005017782) LYPD6 (ENSBIXG00005017744) LYPD6B (ENSBIXG00005017688) KIF5C (ENSBIXG00005017619) EPC2 (ENSBIXG00005017562) MBD5 (ENSBIXG00005017469) ENSBIXG00005017400 ENSBIXG00005017396 ENSBIXG00005005733 ORC4 (ENSBIXG00005017338) ACVR2A (ENSBIXG00005002803) ENSBIXG00005017172 ENSBIXG00005002793 ZEB2 (ENSBIXG00005017016) #22 GTDC1 (ENSBIXG00005016592) #25 ARHGAP15 (ENSBIXG00005016328) #27 KYNU (ENSBIXG00005002592) #28 ENSBIXG00005016245 LRP1B (ENSBIXG00005015953) ENSBIXG00005015364 ENSBIXG00005015329 NXPH2 (ENSBIXG00005015323) ENSBIXG00005015307 SPOPL (ENSBIXG00005015294) HNMT (ENSBIXG00005015241) ENSBIXG00005015215 THSD7B (ENSBIXG00005015144) ENSBIXG00005015049 CXCR4 (ENSBIXG00005015020) Cow DUPLICATION Cow MODERN SPECIES 11 TNFAIP6 (ENSBTAG00000007239) NMI (ENSBTAG00000032369) RBM43 (ENSBTAG00000016217) RND3 (ENSBTAG00000039731) MMADHC (ENSBTAG00000015962) LYPD6 (ENSBTAG00000047426) LYPD6B (ENSBTAG00000019683) KIF5C (ENSBTAG00000018125) EPC2 (ENSBTAG00000018581) MBD5 (ENSBTAG00000019592) PTMA (ENSBTAG00000051947) ORC4 (ENSBTAG00000015291) ACVR2A (ENSBTAG00000018114) ENSBTAG00000012376 ENSBTAG00000054108 ZEB2 (ENSBTAG00000048810) #22 ZEB2 (ENSBTAG00000012615) #22 GTDC1 (ENSBTAG00000001132) #25 ENSBTAG00000050589 #25 ARHGAP15 (ENSBTAG00000032289) #27 KYNU (ENSBTAG00000032277) #28 ENSBTAG00000054433 ENSBTAG00000050185 LRP1B (ENSBTAG00000024632) ENSBTAG00000017629 NXPH2 (ENSBTAG00000018147) SPOPL (ENSBTAG00000013455) ENSBTAG00000001627 ENSBTAG00000050067 HNMT (ENSBTAG00000014432) ENSBTAG00000039437 Cow MODERN SPECIES 11 NMI (ENSBTAG00000032369) RBM43 (ENSBTAG00000016217) RND3 (ENSBTAG00000039731) MMADHC (ENSBTAG00000015962) LYPD6 (ENSBTAG00000047426) LYPD6B (ENSBTAG00000019683) KIF5C (ENSBTAG00000018125) EPC2 (ENSBTAG00000018581) MBD5 (ENSBTAG00000019592) PTMA (ENSBTAG00000051947) ORC4 (ENSBTAG00000015291) ACVR2A (ENSBTAG00000018114) ENSBTAG00000012376 ENSBTAG00000054108 ZEB2 (ENSBTAG00000048810) #22 ZEB2 (ENSBTAG00000012615) #22 GTDC1 (ENSBTAG00000001132) #25 ENSBTAG00000050589 #25 ARHGAP15 (ENSBTAG00000032289) #27 KYNU (ENSBTAG00000032277) #28 ENSBTAG00000054433 ENSBTAG00000050185 LRP1B (ENSBTAG00000024632) ENSBTAG00000017629 NXPH2 (ENSBTAG00000018147) SPOPL (ENSBTAG00000013455) ENSBTAG00000001627 ENSBTAG00000050067 HNMT (ENSBTAG00000014432) ENSBTAG00000039437 THSD7B (ENSBTAG00000044055) Cetacea ANCESTRAL SPECIES 14 ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542.a ENSGT00940000157233 ENSGT00390000011401.ib ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 Blue whale DUPLICATION Blue whale MODERN SPECIES 18 RIF1 (ENSBMSG00010002436) ENSBMSG00010002399 TNFAIP6 (ENSBMSG00010002386) NMI (ENSBMSG00010002366) RBM43 (ENSBMSG00010002353) RND3 (ENSBMSG00010002335) MMADHC (ENSBMSG00010002313) LYPD6 (ENSBMSG00010002294) ENSBMSG00010002277 EPC2 (ENSBMSG00010002250) MBD5 (ENSBMSG00010002215) ENSBMSG00010002178 ACVR2A (ENSBMSG00010002163) ENSBMSG00010002138 ENSBMSG00010002128 #21 ENSBMSG00010002117 #22 ENSBMSG00010002099 #22 ENSBMSG00010002077 #23 GTDC1 (ENSBMSG00010001738) #25 ARHGAP15 (ENSBMSG00010001671) #27 KYNU (ENSBMSG00010001637) #28 LRP1B (ENSBMSG00010001555) ENSBMSG00010001515 ENSBMSG00010001508 NXPH2 (ENSBMSG00010001502) SPOPL (ENSBMSG00010001484) HNMT (ENSBMSG00010001464) ENSBMSG00010001454 THSD7B (ENSBMSG00010001387) CXCR4 (ENSBMSG00010001344) DARS1 (ENSBMSG00010001326) Blue whale MODERN SPECIES 18 ENSBMSG00010002399 TNFAIP6 (ENSBMSG00010002386) NMI (ENSBMSG00010002366) RBM43 (ENSBMSG00010002353) RND3 (ENSBMSG00010002335) MMADHC (ENSBMSG00010002313) LYPD6 (ENSBMSG00010002294) ENSBMSG00010002277 EPC2 (ENSBMSG00010002250) MBD5 (ENSBMSG00010002215) ENSBMSG00010002178 ACVR2A (ENSBMSG00010002163) ENSBMSG00010002138 ENSBMSG00010002128 #21 ENSBMSG00010002117 #22 ENSBMSG00010002099 #22 ENSBMSG00010002077 #23 GTDC1 (ENSBMSG00010001738) #25 ARHGAP15 (ENSBMSG00010001671) #27 KYNU (ENSBMSG00010001637) #28 LRP1B (ENSBMSG00010001555) ENSBMSG00010001515 ENSBMSG00010001508 NXPH2 (ENSBMSG00010001502) SPOPL (ENSBMSG00010001484) HNMT (ENSBMSG00010001464) ENSBMSG00010001454 THSD7B (ENSBMSG00010001387) CXCR4 (ENSBMSG00010001344) DARS1 (ENSBMSG00010001326) MCM6 (ENSBMSG00010001285) Odontoceti ANCESTRAL SPECIES 13 ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542.a ENSGT00940000157233 ENSGT00390000011401.ib ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 Odontoceti_a ANCESTRAL SPECIES 10 ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542.a ENSGT00940000157233 ENSGT00390000011401.ib ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 Odontoceti_b ANCESTRAL SPECIES 12 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542.a ENSGT00940000157233 ENSGT00900000143820 ENSGT00390000011401.ib ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 Monodontidae ANCESTRAL SPECIES 10 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542.a ENSGT00940000157233 ENSGT00900000143820 ENSGT00390000011401.ib ENSGT01020000230615 #21 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 Narwhal MODERN SPECIES 302 ENSMMNG00015010594 RND3 (ENSMMNG00015010616) MMADHC (ENSMMNG00015010638) LYPD6 (ENSMMNG00015010654) LYPD6B (ENSMMNG00015010676) KIF5C (ENSMMNG00015010710) EPC2 (ENSMMNG00015010756) MBD5 (ENSMMNG00015010806) ENSMMNG00015010860 ENSMMNG00015010890 ACVR2A (ENSMMNG00015005198) ENSMMNG00015005211 ENSMMNG00015005217 ENSMMNG00015005234 ENSMMNG00015005241 #21 ZEB2 (ENSMMNG00015005275) #22 ENSMMNG00015005304 #23 GTDC1 (ENSMMNG00015005348) #25 ARHGAP15 (ENSMMNG00015005410) #27 KYNU (ENSMMNG00015005428) #28 LRP1B (ENSMMNG00015005526) NXPH2 (ENSMMNG00015005810) SPOPL (ENSMMNG00015005825) HNMT (ENSMMNG00015005844) THSD7B (ENSMMNG00015005865) CXCR4 (ENSMMNG00015005885) DARS1 (ENSMMNG00015005898) MCM6 (ENSMMNG00015005976) LCT (ENSMMNG00015006012) UBXN4 (ENSMMNG00015006041) R3HDM1 (ENSMMNG00015006127) Beluga whale MODERN SPECIES 84 RBM43 (ENSDLEG00000018283) RND3 (ENSDLEG00000018265) MMADHC (ENSDLEG00000018246) LYPD6 (ENSDLEG00000018237) ENSDLEG00000018220 LYPD6B (ENSDLEG00000018208) KIF5C (ENSDLEG00000018081) EPC2 (ENSDLEG00000018060) MBD5 (ENSDLEG00000018041) ORC4 (ENSDLEG00000017980) ACVR2A (ENSDLEG00000017968) ENSDLEG00000017961 ENSDLEG00000017945 ENSDLEG00000017936 #21 ENSDLEG00000017923 ZEB2 (ENSDLEG00000017853) #22 ENSDLEG00000017836 #23 GTDC1 (ENSDLEG00000017703) #25 ARHGAP15 (ENSDLEG00000017655) #27 KYNU (ENSDLEG00000017616) #28 LRP1B (ENSDLEG00000017215) NXPH2 (ENSDLEG00000017199) SPOPL (ENSDLEG00000017165) HNMT (ENSDLEG00000017149) THSD7B (ENSDLEG00000017083) ENSDLEG00000017079 CXCR4 (ENSDLEG00000017074) DARS (ENSDLEG00000017015) MCM6 (ENSDLEG00000016985) LCT (ENSDLEG00000016911) UBXN4 (ENSDLEG00000016890) Vaquita MODERN SPECIES 18 RND3 (ENSPSNG00000022239) ENSPSNG00000022249 MMADHC (ENSPSNG00000022255) LYPD6 (ENSPSNG00000022268) ENSPSNG00000022273 LYPD6B (ENSPSNG00000022285) KIF5C (ENSPSNG00000022304) EPC2 (ENSPSNG00000022315) MBD5 (ENSPSNG00000022326) ENSPSNG00000022333 ENSPSNG00000009867 ACVR2A (ENSPSNG00000010003) ENSPSNG00000010077 ENSPSNG00000010130 ENSPSNG00000010148 #21 ZEB2 (ENSPSNG00000010233) #22 GTDC1 (ENSPSNG00000010572) #25 ARHGAP15 (ENSPSNG00000010851) #27 KYNU (ENSPSNG00000011089) #28 LRP1B (ENSPSNG00000011597) NXPH2 (ENSPSNG00000014280) SPOPL (ENSPSNG00000014332) HNMT (ENSPSNG00000014404) THSD7B (ENSPSNG00000014532) CXCR4 (ENSPSNG00000015228) DARS1 (ENSPSNG00000015285) MCM6 (ENSPSNG00000015366) LCT (ENSPSNG00000015477) UBXN4 (ENSPSNG00000015726) R3HDM1 (ENSPSNG00000015949) ZRANB3 (ENSPSNG00000016864) Dolphin MODERN SPECIES 4992 ZEB2 (ENSTTRG00000006478) #22 Sperm whale MODERN SPECIES 11 NMI (ENSPCTG00005001633) RBM43 (ENSPCTG00005001620) ENSPCTG00005001612 RND3 (ENSPCTG00005001596) MMADHC (ENSPCTG00005001565) LYPD6 (ENSPCTG00005001545) LYPD6B (ENSPCTG00005001526) KIF5C (ENSPCTG00005001462) EPC2 (ENSPCTG00005001424) MBD5 (ENSPCTG00005001400) ORC4 (ENSPCTG00005001367) ACVR2A (ENSPCTG00005001345) ENSPCTG00005001332 ENSPCTG00005001317 ENSPCTG00005001311 #21 ZEB2 (ENSPCTG00005001256) #22 ENSPCTG00005001214 #23 GTDC1 (ENSPCTG00005001099) #25 ARHGAP15 (ENSPCTG00005001030) #27 KYNU (ENSPCTG00005000984) #28 ENSPCTG00005000956 LRP1B (ENSPCTG00005000809) ENSPCTG00005000761 NXPH2 (ENSPCTG00005000755) SPOPL (ENSPCTG00005000729) HNMT (ENSPCTG00005000712) ENSPCTG00005000701 THSD7B (ENSPCTG00005000463) ENSPCTG00005000398 CXCR4 (ENSPCTG00005000384) DARS1 (ENSPCTG00005000347) Atlantogenata ANCESTRAL SPECIES 9 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 Xenarthra ANCESTRAL SPECIES 826 ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 Sloth MODERN SPECIES 5753 ZEB2 (ENSCHOG00000001435) #22 Armadillo MODERN SPECIES 4151 MBD5 (ENSDNOG00000017491) ENSDNOG00000040740 ORC4 (ENSDNOG00000009805) ACVR2A (ENSDNOG00000009781) ZEB2 (ENSDNOG00000039558) #22 GTDC1 (ENSDNOG00000033624) #25 ARHGAP15 (ENSDNOG00000014973) #27 KYNU (ENSDNOG00000037199) #28 Afrotheria ANCESTRAL SPECIES 1 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 Tenrec MODERN SPECIES 6285 ZEB2 (ENSETEG00000003283) #22 Afrotheria_a ANCESTRAL SPECIES 1 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 ENSGT00940000156095 Elephant MODERN SPECIES 301 RIF1 (ENSLAFG00000009796) TNFAIP6 (ENSLAFG00000009790) NMI (ENSLAFG00000012842) RBM43 (ENSLAFG00000010512) RND3 (ENSLAFG00000010712) MMADHC (ENSLAFG00000016977) LYPD6 (ENSLAFG00000014710) LYPD6B (ENSLAFG00000007340) KIF5C (ENSLAFG00000005632) EPC2 (ENSLAFG00000014312) ENSLAFG00000001900 ENSLAFG00000030020 ORC4 (ENSLAFG00000002631) ACVR2A (ENSLAFG00000002628) ENSLAFG00000032780 ZEB2 (ENSLAFG00000008960) #22 GTDC1 (ENSLAFG00000010261) #25 ARHGAP15 (ENSLAFG00000006748) #27 KYNU (ENSLAFG00000002172) #28 ENSLAFG00000029177 LRP1B (ENSLAFG00000014282) NXPH2 (ENSLAFG00000011361) SPOPL (ENSLAFG00000001640) HNMT (ENSLAFG00000010262) THSD7B (ENSLAFG00000010588) CXCR4 (ENSLAFG00000006285) DARS1 (ENSLAFG00000015092) MCM6 (ENSLAFG00000009089) LCT (ENSLAFG00000009081) UBXN4 (ENSLAFG00000009074) R3HDM1 (ENSLAFG00000009065) Hyrax MODERN SPECIES 10071 ZEB2 (ENSPCAG00000014674) #22 Marsupialia ANCESTRAL SPECIES 5 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00390000017405.j ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000166747 Opossum MODERN SPECIES 3 ENSMODG00000003594 ENSMODG00000003581 RND3 (ENSMODG00000003575) ENSMODG00000043542 MMADHC (ENSMODG00000003566) ENSMODG00000003546 LYPD6 (ENSMODG00000003553) LYPD6B (ENSMODG00000048295) ENSMODG00000039281 KIF5C (ENSMODG00000003526) EPC2 (ENSMODG00000003447) MBD5 (ENSMODG00000003415) ORC4 (ENSMODG00000003327) ACVR2A (ENSMODG00000003295) ENSMODG00000038179 ZEB2 (ENSMODG00000003112) #22 ENSMODG00000039463 #23 GTDC1 (ENSMODG00000003084) #25 ARHGAP15 (ENSMODG00000003016) #27 KYNU (ENSMODG00000002997) #28 ENSMODG00000042134 LRP1B (ENSMODG00000002847) ENSMODG00000050463 ENSMODG00000043501 NXPH2 (ENSMODG00000001201) SPOPL (ENSMODG00000001195) ENSMODG00000027661 ENSMODG00000036842 THSD7B (ENSMODG00000001131) ENSMODG00000047561 ENSMODG00000042094 Marsupialia_b ANCESTRAL SPECIES 3 ENSGT00440000034341 ENSGT01030000234556.b.a ENSGT01030000234556.b.b.c ENSGT01020000230389.a.a.a ENSGT00670000099483 ENSGT00510000048847 ENSGT00940000159197 ENSGT00940000153062.B ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00390000017405.j ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000166747 ENSGT00940000155324 Diprotodontia ANCESTRAL SPECIES 40 ENSGT01030000234556.b.a ENSGT01030000234556.b.b.c ENSGT00940000176135 ENSGT01020000230389.a.a.a ENSGT00670000099483 ENSGT00510000048847 ENSGT00940000159197 ENSGT00940000153062.B ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00390000017405.j ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000166747 ENSGT00940000155324 ENSGT00940000160205 Diprotodontia_a ANCESTRAL SPECIES 39 ENSGT00440000034341 ENSGT01030000234556.b.a ENSGT01030000234556.b.b.c ENSGT01020000230389.a.a.a ENSGT00670000099483 ENSGT00510000048847 ENSGT00940000159197 ENSGT00940000153062.B ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00390000017405.j ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000166747 ENSGT00940000155324 ENSGT00940000160205 koala MODERN SPECIES 18 ENSPCIG00000011982 ENSPCIG00000011980 FXYD6 (ENSPCIG00000033414) LYPD6 (ENSPCIG00000000199) LYPD6B (ENSPCIG00000028557) KIF5C (ENSPCIG00000028554) ENSPCIG00000028553 EPC2 (ENSPCIG00000028543) ENSPCIG00000033245 ENSPCIG00000028541 MBD5 (ENSPCIG00000028539) ENSPCIG00000028537 ORC4 (ENSPCIG00000006936) ACVR2A (ENSPCIG00000006937) ENSPCIG00000037150 ZEB2 (ENSPCIG00000011418) #22 GTDC1 (ENSPCIG00000011412) #25 ENSPCIG00000011411 ARHGAP15 (ENSPCIG00000011353) #27 KYNU (ENSPCIG00000007256) #28 LRP1B (ENSPCIG00000021710) ENSPCIG00000007650 ENSPCIG00000007655 Common wonbat MODERN SPECIES 1052 SCN2B (ENSVURG00010005116) SCN4B (ENSVURG00010005122) ENSVURG00010005130 SMIM35 (ENSVURG00010005136) ENSVURG00010005143 TMPRSS13 (ENSVURG00010005161) ENSVURG00010005180 LYPD6 (ENSVURG00010005208) LYPD6B (ENSVURG00010005227) KIF5C (ENSVURG00010005247) EPC2 (ENSVURG00010005272) ENSVURG00010005301 MBD5 (ENSVURG00010005310) ORC4 (ENSVURG00010005361) ACVR2A (ENSVURG00010005383) ZEB2 (ENSVURG00010005459) #22 GTDC1 (ENSVURG00010005548) #25 ARHGAP15 (ENSVURG00010005719) #27 KYNU (ENSVURG00010005735) #28 LRP1B (ENSVURG00010005875) ENSVURG00010006058 ENSVURG00010006068 NXPH2 (ENSVURG00010006116) SPOPL (ENSVURG00010006130) HNMT (ENSVURG00010006155) THSD7B (ENSVURG00010006259) CXCR4 (ENSVURG00010006950) DARS1 (ENSVURG00010006955) MCM6 (ENSVURG00010006973) ENSVURG00010006984 UBXN4 (ENSVURG00010006987) Wallaby MODERN SPECIES 7798 ZEB2 (ENSMEUG00000008997) #22 Tasmanian devil MODERN SPECIES 2 ENSSHAG00000014063 SCN2B (ENSSHAG00000030462) SCN4B (ENSSHAG00000022045) TMPRSS4 (ENSSHAG00000014461) SMIM35 (ENSSHAG00000032237) ENSSHAG00000029297 ENSSHAG00000004622 ENSSHAG00000029800 ENSSHAG00000028690 LYPD6B (ENSSHAG00000012307) KIF5C (ENSSHAG00000010332) EPC2 (ENSSHAG00000008294) MBD5 (ENSSHAG00000002961) ORC4 (ENSSHAG00000010772) ACVR2A (ENSSHAG00000010152) ZEB2 (ENSSHAG00000016692) #22 GTDC1 (ENSSHAG00000015344) #25 ARHGAP15 (ENSSHAG00000010666) #27 KYNU (ENSSHAG00000009141) #28 LRP1B (ENSSHAG00000004225) ENSSHAG00000025518 ENSSHAG00000031146 NXPH2 (ENSSHAG00000024763) SPOPL (ENSSHAG00000014908) HNMT (ENSSHAG00000030767) THSD7B (ENSSHAG00000026453) CXCR4 (ENSSHAG00000008142) DARS1 (ENSSHAG00000001175) MCM6 (ENSSHAG00000000346) LCT (ENSSHAG00000017319) ENSSHAG00000017244 Platypus MODERN SPECIES 20 NEB (ENSOANG00000006081) RIF1 (ENSOANG00000006078) TNFAIP6 (ENSOANG00000037517) ENSOANG00000006075 RND3 (ENSOANG00000038274) MMADHC (ENSOANG00000006072) LYPD6 (ENSOANG00000043367) LYPD6B (ENSOANG00000042916) KIF5C (ENSOANG00000011829) EPC2 (ENSOANG00000006066) ENSOANG00000044970 ENSOANG00000040740 ENSOANG00000050510 ORC4 (ENSOANG00000008383) ACVR2A (ENSOANG00000008384) ZEB2 (ENSOANG00000011947) #22 GTDC1 (ENSOANG00000011982) #25 ARHGAP15 (ENSOANG00000011983) #27 KYNU (ENSOANG00000045440) #28 LRP1B (ENSOANG00000007998) NXPH2 (ENSOANG00000007997) SPOPL (ENSOANG00000050049) HNMT (ENSOANG00000007995) ENSOANG00000048355 THSD7B (ENSOANG00000007994) ENSOANG00000041192 CXCR4 (ENSOANG00000007993) DARS1 (ENSOANG00000007989) MCM6 (ENSOANG00000007988) LCT (ENSOANG00000007555) ENSOANG00000007554 Sauria ANCESTRAL SPECIES ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT01000000220430 ENSGT00390000016542 ENSGT00940000157233 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Lepidosauria ANCESTRAL SPECIES 7 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT01000000220430 ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631.j #25 ENSGT00950000182860.a.b.b #27 ENSGT00940000181338 ENSGT00390000008033 #28 ENSGT00900000142862 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Episquamata ANCESTRAL SPECIES ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631.j #25 ENSGT00950000182860.a.b.b #27 ENSGT00940000181338 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000166747 Laterata ANCESTRAL SPECIES 2 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631.j #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000166747 ENSGT00940000155324 Common wall lizard MODERN SPECIES RBM43 (ENSPMRG00000001735) RND3 (ENSPMRG00000001723) ENSPMRG00000001719 ENSPMRG00000001715 ENSPMRG00000001698 MMADHC (ENSPMRG00000001693) LYPD6 (ENSPMRG00000001684) LYPD6B (ENSPMRG00000001678) ENSPMRG00000001673 KIF5C (ENSPMRG00000000646) EPC2 (ENSPMRG00000000137) MBD5 (ENSPMRG00000000124) ORC4 (ENSPMRG00000000110) ACVR2A (ENSPMRG00000000096) ENSPMRG00000007491 ZEB2 (ENSPMRG00000007466) #22 GTDC1 (ENSPMRG00000007431) #25 ARHGAP15 (ENSPMRG00000007392) #27 ENSPMRG00000007371 #28 ENSPMRG00000007325 #28 ENSPMRG00000007298 LRP1B (ENSPMRG00000007211) ENSPMRG00000007042 ENSPMRG00000006988 SPOPL (ENSPMRG00000006977) ENSPMRG00000006970 HNMT (ENSPMRG00000006961) ENSPMRG00000006948 THSD7B (ENSPMRG00000006906) CXCR4 (ENSPMRG00000006895) DARS1 (ENSPMRG00000006884) Argentine black and white tegu MODERN SPECIES 20 NEB (ENSSMRG00000023318) RIF1 (ENSSMRG00000023454) TNFAIP6 (ENSSMRG00000023455) ENSSMRG00000023456 RBM43 (ENSSMRG00000023457) RND3 (ENSSMRG00000023459) MMADHC (ENSSMRG00000023460) LYPD6 (ENSSMRG00000023461) LYPD6B (ENSSMRG00000023462) ENSSMRG00000023463 KIF5C (ENSSMRG00000023464) EPC2 (ENSSMRG00000023465) MBD5 (ENSSMRG00000023466) ORC4 (ENSSMRG00000023467) ACVR2A (ENSSMRG00000023468) ZEB2 (ENSSMRG00000023477) #22 GTDC1 (ENSSMRG00000023478) #25 ARHGAP15 (ENSSMRG00000023481) #27 KYNU (ENSSMRG00000023482) #28 LRP1B (ENSSMRG00000023483) ENSSMRG00000023485 ENSSMRG00000023486 NXPH2 (ENSSMRG00000023487) ENSSMRG00000023489 SPOPL (ENSSMRG00000023490) HNMT (ENSSMRG00000023491) ENSSMRG00000023492 THSD7B (ENSSMRG00000023493) ENSSMRG00000023495 POLR3F (ENSSMRG00000023496) ENSSMRG00000023497 Toxicofera ANCESTRAL SPECIES 10 ENSGT00940000154714 ENSGT00940000154533.b.d.q ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631.j #25 ENSGT00950000182860.a.b.b #27 ENSGT00940000181338 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00940000160835 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Elapidae DUPLICATION Elapidae DUPLICATION Elapidae ANCESTRAL SPECIES 156 ENSGT00950000183208.A.c.a.g.a #22 ENSGT00390000006631.i #25 Elapidae_a ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.g.a #22 Blue-lipped sea krait MODERN SPECIES 3520 ENSLLTG00000002281 #22 Indian cobra MODERN SPECIES ARL5A (ENSNNAG00000018385) NEB (ENSNNAG00000018647) TNFAIP6 (ENSNNAG00000019067) NMI (ENSNNAG00000019069) RND3 (ENSNNAG00000019074) ENSNNAG00000019076 MMADHC (ENSNNAG00000019078) LYPD6 (ENSNNAG00000006713) LYPD6B (ENSNNAG00000006750) ENSNNAG00000006910 KIF5C (ENSNNAG00000007202) EPC2 (ENSNNAG00000012958) MBD5 (ENSNNAG00000013008) ORC4 (ENSNNAG00000013093) ACVR2A (ENSNNAG00000013129) ZEB2 (ENSNNAG00000013202) #22 ENSNNAG00000013247 #25 GTDC1 (ENSNNAG00000013283) #25 ARHGAP15 (ENSNNAG00000013349) #27 ENSNNAG00000013365 KYNU (ENSNNAG00000013382) #28 LRP1B (ENSNNAG00000013416) ENSNNAG00000013673 ENSNNAG00000013733 NXPH2 (ENSNNAG00000013743) SPOPL (ENSNNAG00000013754) HNMT (ENSNNAG00000013815) THSD7B (ENSNNAG00000013843) CXCR4 (ENSNNAG00000014170) DARS1 (ENSNNAG00000014185) MCM6 (ENSNNAG00000014241) Elapidae ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.g.b #22 Elapidae_a ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.g.b #22 Blue-lipped sea krait MODERN SPECIES 6887 ENSLLTG00000015571 #22 Elapidae ANCESTRAL SPECIES ENSGT00940000154714 ENSGT00940000154533.b.d.q ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00940000157541 ENSGT00940000164219.a.a.a.c.b ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a.h #22 ENSGT00390000006631.j #25 ENSGT00950000182860.a.b.b #27 ENSGT00940000181338 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00940000160835 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Elapidae_a ANCESTRAL SPECIES 5 ENSGT00940000154714 ENSGT00940000154533.b.d.q ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00940000157541 ENSGT00940000164219.a.a.a.c.b ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542.f ENSGT00940000157233 ENSGT00950000183208.A.c.a.h #22 ENSGT00390000006631.j #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00940000160835 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000166747 Acanthophiinae ANCESTRAL SPECIES 7 ENSGT00940000154714 ENSGT00940000154533.b.d.q ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00940000157541 ENSGT00940000164219.a.a.a.c.b ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542.f ENSGT00940000157233 ENSGT00950000183208.A.c.a.h #22 ENSGT00390000006631.j #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00940000160835 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000166747 Mainland tiger snake MODERN SPECIES 54 LYPD6B (ENSNSUG00000010077) KIF5C (ENSNSUG00000010078) ENSNSUG00000010080 EPC2 (ENSNSUG00000010082) MBD5 (ENSNSUG00000010160) ORC4 (ENSNSUG00000010166) ACVR2A (ENSNSUG00000010179) ZEB2 (ENSNSUG00000010193) #22 GTDC1 (ENSNSUG00000010356) #25 ARHGAP15 (ENSNSUG00000010357) #27 KYNU (ENSNSUG00000010362) #28 LRP1B (ENSNSUG00000010366) ENSNSUG00000010371 ENSNSUG00000010372 ENSNSUG00000010373 NXPH2 (ENSNSUG00000010374) SPOPL (ENSNSUG00000010377) HNMT (ENSNSUG00000010378) THSD7B (ENSNSUG00000010381) Eastern brown snake MODERN SPECIES 98 ZEB2 (ENSPTXG00000012562) #22 GTDC1 (ENSPTXG00000012561) #25 ARHGAP15 (ENSPTXG00000012527) #27 KYNU (ENSPTXG00000012526) #28 ENSPTXG00000012525 ENSPTXG00000012524 LRP1B (ENSPTXG00000012523) Lizard MODERN SPECIES ENSACAG00000044585 MAT2B (ENSACAG00000028511) HMMR (ENSACAG00000029328) NUDCD2 (ENSACAG00000028809) CCNG1 (ENSACAG00000014615) ENSACAG00000040089 ENSACAG00000044587 ENSACAG00000014657 GABRG2 (ENSACAG00000014692) GABRA1 (ENSACAG00000014898) GABRA6 (ENSACAG00000015043) GABRB2 (ENSACAG00000015134) ENSACAG00000002540 ENSACAG00000042245 ENSACAG00000037056 ZEB2 (ENSACAG00000023811) #22 GTDC1 (ENSACAG00000003082) #25 ARHGAP15 (ENSACAG00000003110) #27 KYNU (ENSACAG00000003164) #28 ENSACAG00000038880 LRP1B (ENSACAG00000003221) ENSACAG00000041166 ENSACAG00000003521 ENSACAG00000042491 NXPH2 (ENSACAG00000000334) SPOPL (ENSACAG00000000338) HNMT (ENSACAG00000037643) ENSACAG00000029670 THSD7B (ENSACAG00000000545) ENSACAG00000039047 CXCR4 (ENSACAG00000000795) tuatara DUPLICATION tuatara MODERN SPECIES 823 ENSSPUG00000007767 #22 ENSSPUG00000008037 #22 GTDC1 (ENSSPUG00000008049) #25 ARHGAP15 (ENSSPUG00000008099) #27 ENSSPUG00000008209 KYNU (ENSSPUG00000008214) #28 ENSSPUG00000008227 LRP1B (ENSSPUG00000008249) tuatara MODERN SPECIES 823 ENSSPUG00000007767 #22 ENSSPUG00000008037 #22 GTDC1 (ENSSPUG00000008049) #25 ARHGAP15 (ENSSPUG00000008099) #27 ENSSPUG00000008209 KYNU (ENSSPUG00000008214) #28 ENSSPUG00000008227 LRP1B (ENSSPUG00000008249) Archelosauria ANCESTRAL SPECIES 8 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Cryptodira ANCESTRAL SPECIES 5 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000166747 ENSGT00940000155324 Testudinoidea ANCESTRAL SPECIES 11 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542.j ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000166747 ENSGT00940000155324 Testudinidae ANCESTRAL SPECIES 8 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542.j ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631.g #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000166747 ENSGT00940000155324 Goode s thornscrub tortoise MODERN SPECIES 2 NEB (ENSGEVG00005020817) RIF1 (ENSGEVG00005020864) TNFAIP6 (ENSGEVG00005020884) NMI (ENSGEVG00005020889) RBM43 (ENSGEVG00005020902) RND3 (ENSGEVG00005020917) ENSGEVG00005020925 MMADHC (ENSGEVG00005020928) LYPD6 (ENSGEVG00005020933) LYPD6B (ENSGEVG00005020935) KIF5C (ENSGEVG00005020950) EPC2 (ENSGEVG00005020958) MBD5 (ENSGEVG00005020959) ORC4 (ENSGEVG00005020967) ACVR2A (ENSGEVG00005020977) ZEB2 (ENSGEVG00005020983) #22 GTDC1 (ENSGEVG00005020989) #25 ARHGAP15 (ENSGEVG00005020993) #27 KYNU (ENSGEVG00005021006) #28 LRP1B (ENSGEVG00005021016) ENSGEVG00005021033 ENSGEVG00005021039 ENSGEVG00005021042 NXPH2 (ENSGEVG00005021046) SPOPL (ENSGEVG00005021047) HNMT (ENSGEVG00005021050) THSD7B (ENSGEVG00005021056) CXCR4 (ENSGEVG00005021063) DARS1 (ENSGEVG00005021065) MCM6 (ENSGEVG00005021067) ENSGEVG00005021068 Abingdon island giant tortoise MODERN SPECIES 365 ZEB2 (ENSCABG00000011719) #22 ENSCABG00000011730 #25 Emydidae ANCESTRAL SPECIES 4 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542.j ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000166747 ENSGT00940000155324 painted turtle MODERN SPECIES 796 TBC1D15 (ENSCPBG00000005426) TPH2 (ENSCPBG00000000994) TRHDE (ENSCPBG00000000715) ZEB2 (ENSCPBG00000000598) #22 GTDC1 (ENSCPBG00000000510) #25 ARHGAP15 (ENSCPBG00000000440) #27 KYNU (ENSCPBG00000000379) #28 Three-toed box turtle MODERN SPECIES 25 ARL5A (ENSTMTG00000022372) NEB (ENSTMTG00000016118) RIF1 (ENSTMTG00000013981) NMI (ENSTMTG00000013868) RBM43 (ENSTMTG00000013865) RND3 (ENSTMTG00000013856) MMADHC (ENSTMTG00000013842) LYPD6 (ENSTMTG00000013835) LYPD6B (ENSTMTG00000013809) KIF5C (ENSTMTG00000013757) EPC2 (ENSTMTG00000013718) MBD5 (ENSTMTG00000013709) ORC4 (ENSTMTG00000013683) ACVR2A (ENSTMTG00000013661) ENSTMTG00000013650 ZEB2 (ENSTMTG00000013632) #22 GTDC1 (ENSTMTG00000013582) #25 ARHGAP15 (ENSTMTG00000013531) #27 KYNU (ENSTMTG00000013497) #28 LRP1B (ENSTMTG00000013281) ENSTMTG00000013165 ENSTMTG00000013143 NXPH2 (ENSTMTG00000013135) SPOPL (ENSTMTG00000013108) HNMT (ENSTMTG00000013096) THSD7B (ENSTMTG00000012697) CXCR4 (ENSTMTG00000012638) DARS1 (ENSTMTG00000012624) MCM6 (ENSTMTG00000014960) ENSTMTG00000014910 ENSTMTG00000014903 Chinese turtle MODERN SPECIES 2062 KIF5C (ENSPSIG00000008103) EPC2 (ENSPSIG00000007324) MBD5 (ENSPSIG00000007316) ENSPSIG00000007307 ENSPSIG00000007291 ORC4 (ENSPSIG00000006933) ENSPSIG00000006916 ACVR2A (ENSPSIG00000017364) ENSPSIG00000001099 ZEB2 (ENSPSIG00000016788) #22 GTDC1 (ENSPSIG00000016771) #25 ARHGAP15 (ENSPSIG00000016658) #27 ENSPSIG00000016520 #28 ENSPSIG00000016260 #28 Archosauria ANCESTRAL SPECIES 6 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Australian saltwater crocodile MODERN SPECIES 66 ENSCPRG00005008458 RIF1 (ENSCPRG00005008380) TNFAIP6 (ENSCPRG00005008363) NMI (ENSCPRG00005008353) RBM43 (ENSCPRG00005008350) RND3 (ENSCPRG00005008330) MMADHC (ENSCPRG00005008285) LYPD6 (ENSCPRG00005008268) LYPD6B (ENSCPRG00005008266) KIF5C (ENSCPRG00005007708) EPC2 (ENSCPRG00005007668) MBD5 (ENSCPRG00005007665) ORC4 (ENSCPRG00005007654) ACVR2A (ENSCPRG00005007643) ENSCPRG00005007629 ZEB2 (ENSCPRG00005007598) #22 GTDC1 (ENSCPRG00005007582) #25 ENSCPRG00005007562 ARHGAP15 (ENSCPRG00005007510) #27 ENSCPRG00005007469 KYNU (ENSCPRG00005007454) #28 LRP1B (ENSCPRG00005005815) ENSCPRG00005005002 NXPH2 (ENSCPRG00005004987) SPOPL (ENSCPRG00005004973) ENSCPRG00005004971 HNMT (ENSCPRG00005004963) ENSCPRG00005004950 ENSCPRG00005004946 THSD7B (ENSCPRG00005004920) CXCR4 (ENSCPRG00005004904) Aves ANCESTRAL SPECIES 8 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b African ostrich MODERN SPECIES 695 ORC4 (ENSSCUG00000013987) ACVR2A (ENSSCUG00000013989) ZEB2 (ENSSCUG00000014041) #22 GTDC1 (ENSSCUG00000014063) #25 ARHGAP15 (ENSSCUG00000014071) #27 KYNU (ENSSCUG00000014075) #28 ENSSCUG00000014086 LRP1B (ENSSCUG00000014116) ENSSCUG00000014175 NXPH2 (ENSSCUG00000014198) SPOPL (ENSSCUG00000014202) HNMT (ENSSCUG00000014206) ENSSCUG00000014208 THSD7B (ENSSCUG00000014244) CXCR4 (ENSSCUG00000014286) DARS1 (ENSSCUG00000014287) MCM6 (ENSSCUG00000014301) LCT (ENSSCUG00000014317) Neognathae ANCESTRAL SPECIES 6 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Neognathae_b ANCESTRAL SPECIES 7 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00960000189410 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Passeriformes ANCESTRAL SPECIES 6 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00960000189410 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Passeriformes_d ANCESTRAL SPECIES 8 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00960000189410 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324.ab.b Passeriformes_g ANCESTRAL SPECIES 9 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542.h ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00960000189410 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324.ab.b Medium ground finch MODERN SPECIES 1 NMI (ENSGFOG00000005782) RBM43 (ENSGFOG00000005798) RND3 (ENSGFOG00000005858) ENSGFOG00000005861 MMADHC (ENSGFOG00000005864) LYPD6 (ENSGFOG00000005872) LYPD6B (ENSGFOG00000005878) KIF5C (ENSGFOG00000005880) EPC2 (ENSGFOG00000005891) ENSGFOG00000005897 ENSGFOG00000005904 ENSGFOG00000005920 ACVR2A (ENSGFOG00000005925) ZEB2 (ENSGFOG00000000020) #22 GTDC1 (ENSGFOG00000000024) #25 ARHGAP15 (ENSGFOG00000000095) #27 KYNU (ENSGFOG00000000105) #28 LRP1B (ENSGFOG00000000311) ENSGFOG00000002046 NXPH2 (ENSGFOG00000002058) SPOPL (ENSGFOG00000002067) HNMT (ENSGFOG00000002079) ENSGFOG00000002088 THSD7B (ENSGFOG00000002128) CXCR4 (ENSGFOG00000002308) DARS1 (ENSGFOG00000002321) MCM6 (ENSGFOG00000002438) LCT (ENSGFOG00000003565) UBXN4 (ENSGFOG00000003676) Passeroidea ANCESTRAL SPECIES 8 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542.h ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00960000189410 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324.ab.b Zebra finch MODERN SPECIES 29 RBM43 (ENSTGUG00000011995) ENSTGUG00000021053 ENSTGUG00000028378 RND3 (ENSTGUG00000011991) MMADHC (ENSTGUG00000011984) ENSTGUG00000028714 LYPD6 (ENSTGUG00000011981) ENSTGUG00000019485 LYPD6B (ENSTGUG00000020162) KIF5C (ENSTGUG00000011950) EPC2 (ENSTGUG00000011944) MBD5 (ENSTGUG00000011939) ENSTGUG00000021808 ORC4 (ENSTGUG00000011929) ACVR2A (ENSTGUG00000011916) ZEB2 (ENSTGUG00000011904) #22 GTDC1 (ENSTGUG00000011902) #25 ARHGAP15 (ENSTGUG00000011883) #27 KYNU (ENSTGUG00000011872) #28 LRP1B (ENSTGUG00000011849) ENSTGUG00000019269 ENSTGUG00000011843 NXPH2 (ENSTGUG00000011842) SPOPL (ENSTGUG00000011840) HNMT (ENSTGUG00000011836) ENSTGUG00000011829 THSD7B (ENSTGUG00000011824) CXCR4 (ENSTGUG00000011822) DARS1 (ENSTGUG00000011810) MCM6 (ENSTGUG00000011790) ENSTGUG00000019584 Common canary MODERN SPECIES 8 TNFAIP6 (ENSSCAG00000008054) NMI (ENSSCAG00000008060) RBM43 (ENSSCAG00000008064) ENSSCAG00000008066 RND3 (ENSSCAG00000008070) ENSSCAG00000008077 MMADHC (ENSSCAG00000008081) LYPD6 (ENSSCAG00000008089) ENSSCAG00000008098 LYPD6B (ENSSCAG00000008103) KIF5C (ENSSCAG00000008117) EPC2 (ENSSCAG00000008145) MBD5 (ENSSCAG00000008168) ORC4 (ENSSCAG00000008247) ACVR2A (ENSSCAG00000008262) ZEB2 (ENSSCAG00000008306) #22 ENSSCAG00000008312 #23 GTDC1 (ENSSCAG00000008330) #25 ARHGAP15 (ENSSCAG00000008352) #27 KYNU (ENSSCAG00000008360) #28 LRP1B (ENSSCAG00000008544) ENSSCAG00000009974 ENSSCAG00000009989 NXPH2 (ENSSCAG00000009997) SPOPL (ENSSCAG00000010004) HNMT (ENSSCAG00000010007) ENSSCAG00000010011 THSD7B (ENSSCAG00000010047) CXCR4 (ENSSCAG00000010153) DARS1 (ENSSCAG00000010155) MCM6 (ENSSCAG00000010162) Flycatcher MODERN SPECIES 26 ARL5A (ENSFALG00000023620) NEB (ENSFALG00000013894) RIF1 (ENSFALG00000013874) TNFAIP6 (ENSFALG00000013873) NMI (ENSFALG00000013870) RBM43 (ENSFALG00000013867) RND3 (ENSFALG00000013866) MMADHC (ENSFALG00000023718) LYPD6 (ENSFALG00000027300) LYPD6B (ENSFALG00000013863) KIF5C (ENSFALG00000024506) ENSFALG00000028125 ENSFALG00000013858 ORC4 (ENSFALG00000013856) ACVR2A (ENSFALG00000013851) ZEB2 (ENSFALG00000013846) #22 GTDC1 (ENSFALG00000013845) #25 ARHGAP15 (ENSFALG00000013843) #27 KYNU (ENSFALG00000013835) #28 ENSFALG00000027773 LRP1B (ENSFALG00000013809) ENSFALG00000027337 ENSFALG00000025359 ENSFALG00000026459 NXPH2 (ENSFALG00000014098) SPOPL (ENSFALG00000025445) HNMT (ENSFALG00000013782) ENSFALG00000013777 THSD7B (ENSFALG00000013768) CXCR4 (ENSFALG00000013763) DARS1 (ENSFALG00000013752) Great tit MODERN SPECIES 27 ARL5A (ENSPMJG00000000061) NEB (ENSPMJG00000020007) RIF1 (ENSPMJG00000020006) TNFAIP6 (ENSPMJG00000020005) NMI (ENSPMJG00000020004) RBM43 (ENSPMJG00000020003) RND3 (ENSPMJG00000020001) MMADHC (ENSPMJG00000020000) LYPD6 (ENSPMJG00000019999) LYPD6B (ENSPMJG00000019998) KIF5C (ENSPMJG00000019997) EPC2 (ENSPMJG00000019996) MBD5 (ENSPMJG00000019995) ORC4 (ENSPMJG00000019994) ACVR2A (ENSPMJG00000019993) ZEB2 (ENSPMJG00000019972) #22 GTDC1 (ENSPMJG00000019971) #25 ARHGAP15 (ENSPMJG00000019970) #27 KYNU (ENSPMJG00000019969) #28 ENSPMJG00000019968 LRP1B (ENSPMJG00000019966) ENSPMJG00000019964 ENSPMJG00000019963 NXPH2 (ENSPMJG00000019960) SPOPL (ENSPMJG00000019959) HNMT (ENSPMJG00000019956) ENSPMJG00000019955 THSD7B (ENSPMJG00000019954) CXCR4 (ENSPMJG00000019953) DARS1 (ENSPMJG00000019952) MCM6 (ENSPMJG00000019951) Neognathae_c ANCESTRAL SPECIES 9 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00960000189410 ENSGT00940000160835 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b Golden eagle MODERN SPECIES 22 NEB (ENSACCG00020008753) RIF1 (ENSACCG00020004834) TNFAIP6 (ENSACCG00020004742) NMI (ENSACCG00020004728) RBM43 (ENSACCG00020004722) RND3 (ENSACCG00020004714) MMADHC (ENSACCG00020004705) LYPD6 (ENSACCG00020004700) LYPD6B (ENSACCG00020004692) KIF5C (ENSACCG00020004682) EPC2 (ENSACCG00020004673) MBD5 (ENSACCG00020004667) ORC4 (ENSACCG00020004654) ACVR2A (ENSACCG00020004639) ENSACCG00020004620 ZEB2 (ENSACCG00020004610) #22 GTDC1 (ENSACCG00020004583) #25 ARHGAP15 (ENSACCG00020004554) #27 KYNU (ENSACCG00020004543) #28 LRP1B (ENSACCG00020003781) ENSACCG00020002322 ENSACCG00020002307 ENSACCG00020002285 NXPH2 (ENSACCG00020002266) SPOPL (ENSACCG00020002242) HNMT (ENSACCG00020002230) ENSACCG00020002205 THSD7B (ENSACCG00020002181) CXCR4 (ENSACCG00020002142) DARS1 (ENSACCG00020002123) MCM6 (ENSACCG00020002049) Kakapo MODERN SPECIES 22 ARL5A (ENSSHBG00005017513) NEB (ENSSHBG00005017527) RIF1 (ENSSHBG00005017612) TNFAIP6 (ENSSHBG00005017775) NMI (ENSSHBG00005017783) RBM43 (ENSSHBG00005017793) RND3 (ENSSHBG00005017805) MMADHC (ENSSHBG00005017816) LYPD6 (ENSSHBG00005017825) LYPD6B (ENSSHBG00005017884) KIF5C (ENSSHBG00005017894) EPC2 (ENSSHBG00005017902) MBD5 (ENSSHBG00005017919) ORC4 (ENSSHBG00005017938) ACVR2A (ENSSHBG00005017945) ZEB2 (ENSSHBG00005017953) #22 GTDC1 (ENSSHBG00005017963) #25 ARHGAP15 (ENSSHBG00005017968) #27 KYNU (ENSSHBG00005017982) #28 LRP1B (ENSSHBG00005018190) ENSSHBG00005019612 ENSSHBG00005019617 ENSSHBG00005019621 NXPH2 (ENSSHBG00005019625) SPOPL (ENSSHBG00005019629) ENSSHBG00005019633 ENSSHBG00005019634 ENSSHBG00005019637 THSD7B (ENSSHBG00005019648) ENSSHBG00005019669 CXCR4 (ENSSHBG00005019670) Galloanserae ANCESTRAL SPECIES 7 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Anatidae ANCESTRAL SPECIES 37 ENSGT00940000154533.b.d.s ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00960000193288 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000170936 Duck MODERN SPECIES 25 ENSAPLG00000007227 ENSAPLG00000029124 ENSAPLG00000021162 RIF1 (ENSAPLG00000007092) TNFAIP6 (ENSAPLG00000006901) ENSAPLG00000006787 RND3 (ENSAPLG00000006777) MMADHC (ENSAPLG00000006746) LYPD6 (ENSAPLG00000006742) LYPD6B (ENSAPLG00000006734) KIF5C (ENSAPLG00000005832) EPC2 (ENSAPLG00000010318) MBD5 (ENSAPLG00000010489) ORC4 (ENSAPLG00000010668) ACVR2A (ENSAPLG00000011198) ZEB2 (ENSAPLG00000007687) #22 GTDC1 (ENSAPLG00000007900) #25 ARHGAP15 (ENSAPLG00000008021) #27 KYNU (ENSAPLG00000008142) #28 LRP1B (ENSAPLG00000023161) ENSAPLG00000018223 ENSAPLG00000025771 ENSAPLG00000008881 ENSAPLG00000027181 NXPH2 (ENSAPLG00000001877) SPOPL (ENSAPLG00000008966) HNMT (ENSAPLG00000022720) MAP3K2 (ENSAPLG00000012930) PECR (ENSAPLG00000012862) TMEM169 (ENSAPLG00000012858) XRCC5 (ENSAPLG00000012767) Pink-footed goose MODERN SPECIES 25 ENSABRG00000010176 RIF1 (ENSABRG00000010041) TNFAIP6 (ENSABRG00000010014) ENSABRG00000010005 RBM43 (ENSABRG00000010000) RND3 (ENSABRG00000009986) MMADHC (ENSABRG00000009981) LYPD6 (ENSABRG00000009936) LYPD6B (ENSABRG00000009917) KIF5C (ENSABRG00000008750) EPC2 (ENSABRG00000008493) MBD5 (ENSABRG00000008432) ORC4 (ENSABRG00000008400) ACVR2A (ENSABRG00000008383) ENSABRG00000008258 ZEB2 (ENSABRG00000008234) #22 GTDC1 (ENSABRG00000008212) #25 ARHGAP15 (ENSABRG00000008179) #27 KYNU (ENSABRG00000008161) #28 LRP1B (ENSABRG00000007918) ENSABRG00000007871 ENSABRG00000007865 ENSABRG00000007851 NXPH2 (ENSABRG00000007844) SPOPL (ENSABRG00000007833) HNMT (ENSABRG00000007808) ENSABRG00000007790 THSD7B (ENSABRG00000007388) CXCR4 (ENSABRG00000007346) DARS1 (ENSABRG00000006410) MCM6 (ENSABRG00000006023) Phasianidae DUPLICATION Phasianidae ANCESTRAL SPECIES 8 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a.k #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00900000141555 ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 Japanese quail MODERN SPECIES 25 ARL5A (ENSCJPG00005020514) ENSCJPG00005020515 RIF1 (ENSCJPG00005020659) TNFAIP6 (ENSCJPG00005020664) NMI (ENSCJPG00005020666) RBM43 (ENSCJPG00005020668) RND3 (ENSCJPG00005020670) MMADHC (ENSCJPG00005020675) LYPD6 (ENSCJPG00005020681) LYPD6B (ENSCJPG00005020687) KIF5C (ENSCJPG00005020706) EPC2 (ENSCJPG00005020765) MBD5 (ENSCJPG00005020766) ORC4 (ENSCJPG00005020767) ACVR2A (ENSCJPG00005020768) ZEB2 (ENSCJPG00005020782) #22 GTDC1 (ENSCJPG00005020785) #25 ARHGAP15 (ENSCJPG00005020786) #27 UPP2 (ENSCJPG00005020788) CCDC148 (ENSCJPG00005020789) PKP4 (ENSCJPG00005020790) ENSCJPG00005020791 TANC1 (ENSCJPG00005020796) WDSUB1 (ENSCJPG00005020808) BAZ2B (ENSCJPG00005020810) ENSCJPG00005020946 Phasianidae_b ANCESTRAL SPECIES 8 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a.k #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00940000166779 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000160205 Chicken MODERN SPECIES 36 ENSGALG00010010115 RIF1 (ENSGALG00010009850) TNFAIP6 (ENSGALG00010009793) NMI (ENSGALG00010009731) RBM43 (ENSGALG00010009690) ENSGALG00010009641 RND3 (ENSGALG00010009638) MMADHC (ENSGALG00010009609) LYPD6 (ENSGALG00010009591) LYPD6B (ENSGALG00010009583) KIF5C (ENSGALG00010009578) EPC2 (ENSGALG00010009555) MBD5 (ENSGALG00010009515) ORC4 (ENSGALG00010009498) ACVR2A (ENSGALG00010009474) ZEB2 (ENSGALG00010009461) #22 GTDC1 (ENSGALG00010009435) #25 ARHGAP15 (ENSGALG00010009373) #27 KYNU (ENSGALG00010009338) #28 ENSGALG00010009269 ENSGALG00010011353 ENSGALG00010009257 ENSGALG00010009224 NXPH2 (ENSGALG00010009212) SPOPL (ENSGALG00010009172) HNMT (ENSGALG00010009147) ENSGALG00010009112 THSD7B (ENSGALG00010009106) CXCR4 (ENSGALG00010009099) DARS (ENSGALG00010009094) MCM6 (ENSGALG00010019843) Turkey MODERN SPECIES 27 ENSMGAG00000015970 HNMT (ENSMGAG00000012535) ENSMGAG00000019800 ENSMGAG00000012549 ENSMGAG00000012543 ENSMGAG00000012558 ENSMGAG00000017911 ENSMGAG00000018144 ENSMGAG00000020828 ENSMGAG00000022989 ENSMGAG00000022357 ENSMGAG00000012615 #28 ENSMGAG00000020185 ENSMGAG00000012624 #25 ENSMGAG00000019606 #25 ENSMGAG00000012628 #22 ENSMGAG00000018373 #22 ENSMGAG00000012670 ENSMGAG00000012656 MBD5 (ENSMGAG00000012693) ENSMGAG00000012689 ENSMGAG00000012694 LYPD6B (ENSMGAG00000012711) ENSMGAG00000012714 ENSMGAG00000012713 RND3 (ENSMGAG00000019988) ENSMGAG00000012721 ENSMGAG00000012727 ENSMGAG00000012732 ENSMGAG00000017715 ENSMGAG00000022891 Phasianidae ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.l #22 Phasianidae_b ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.l #22 Turkey MODERN SPECIES 27 HNMT (ENSMGAG00000012535) ENSMGAG00000019800 ENSMGAG00000012549 ENSMGAG00000012543 ENSMGAG00000012558 ENSMGAG00000017911 ENSMGAG00000018144 ENSMGAG00000020828 ENSMGAG00000022989 ENSMGAG00000022357 ENSMGAG00000012615 #28 ENSMGAG00000020185 ENSMGAG00000012624 #25 ENSMGAG00000019606 #25 ENSMGAG00000012628 #22 ENSMGAG00000018373 #22 ENSMGAG00000012670 ENSMGAG00000012656 MBD5 (ENSMGAG00000012693) ENSMGAG00000012689 ENSMGAG00000012694 LYPD6B (ENSMGAG00000012711) ENSMGAG00000012714 ENSMGAG00000012713 RND3 (ENSMGAG00000019988) ENSMGAG00000012721 ENSMGAG00000012727 ENSMGAG00000012732 ENSMGAG00000017715 ENSMGAG00000022891 ENSMGAG00000019364 Anura ANCESTRAL SPECIES 7 ENSGT00940000154714 ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00940000154311.a.b.o.a ENSGT00530000063686.a.a ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.b ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000155324 ENSGT00940000170936 ENSGT00940000172822 ENSGT00940000160205 Frog MODERN SPECIES 9 ENSXETG00000042237 ENSXETG00000004526 ENSXETG00000031130 nmi (ENSXETG00000004525) rnd3 (ENSXETG00000047421) mmadhc (ENSXETG00000004524) lypd6 (ENSXETG00000004522) lypd6b (ENSXETG00000030529) kif5c (ENSXETG00000004486) epc2 (ENSXETG00000024611) mbd5 (ENSXETG00000018214) orc4 (ENSXETG00000021718) acvr2a (ENSXETG00000021720) ENSXETG00000048550 ENSXETG00000047564 zeb2 (ENSXETG00000000237) #22 gtdc1 (ENSXETG00000000254) #25 arhgap15 (ENSXETG00000037989) #27 kynu (ENSXETG00000032399) #28 ENSXETG00000039635 ENSXETG00000040881 LRP1B (ENSXETG00000035383) ENSXETG00000043969 rbm38 (ENSXETG00000001304) spopl (ENSXETG00000001305) hnmt (ENSXETG00000014875) thsd7b (ENSXETG00000014878) cxcr4 (ENSXETG00000041940) dars1 (ENSXETG00000025033) mcm6 (ENSXETG00000014891) ENSXETG00000034493 Leishan spiny toad MODERN SPECIES 10 ENSLLEG00000011911 ENSLLEG00000011678 ENSLLEG00000011640 RND3 (ENSLLEG00000011580) ENSLLEG00000011561 MMADHC (ENSLLEG00000011447) LYPD6 (ENSLLEG00000011401) LYPD6B (ENSLLEG00000011339) KIF5C (ENSLLEG00000010575) EPC2 (ENSLLEG00000010232) MBD5 (ENSLLEG00000010115) ORC4 (ENSLLEG00000009923) ACVR2A (ENSLLEG00000009386) ENSLLEG00000009324 ENSLLEG00000009305 ZEB2 (ENSLLEG00000009045) #22 GTDC1 (ENSLLEG00000008844) #25 ENSLLEG00000008819 ENSLLEG00000008799 ARHGAP15 (ENSLLEG00000008547) #27 KYNU (ENSLLEG00000008448) #28 ENSLLEG00000008412 ENSLLEG00000008392 ENSLLEG00000008363 LRP1B (ENSLLEG00000007429) ENSLLEG00000007340 NXPH2 (ENSLLEG00000007302) SPOPL (ENSLLEG00000007173) ENSLLEG00000007135 ENSLLEG00000006745 ENSLLEG00000006667 Coelacanth MODERN SPECIES 1326 ZEB2 (ENSLACG00000009946) #22 Actinopterygii ANCESTRAL SPECIES ENSGT00390000006705 ENSGT00940000158559 ENSGT00940000156095 ENSGT00940000160205 ENSGT00940000165390 ENSGT00530000063686.a.a ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.a.a ENSGT00940000181625 ENSGT00940000157521.b ENSGT00940000167103 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862 ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F Reedfish MODERN SPECIES 16 R3HDM1 (ENSECRG00000010368) UBXN4 (ENSECRG00000010348) ENSECRG00000010333 NMI (ENSECRG00000010319) rnd3b (ENSECRG00000010309) ENSECRG00000010302 mmadhca (ENSECRG00000010291) lypd6 (ENSECRG00000010280) lypd6b (ENSECRG00000010269) KIF5C (ENSECRG00000010243) epc2 (ENSECRG00000010226) MBD5 (ENSECRG00000010210) orc4 (ENSECRG00000010192) acvr2aa (ENSECRG00000010157) ENSECRG00000010123 zeb2b (ENSECRG00000010088) #22 gtdc1 (ENSECRG00000010049) #25 ENSECRG00000010038 arhgap15 (ENSECRG00000010022) #27 KYNU (ENSECRG00000009999) #28 ENSECRG00000009992 ENSECRG00000009987 ENSECRG00000009984 LRP1B (ENSECRG00000009175) ENSECRG00000008792 ENSECRG00000008780 NXPH2 (ENSECRG00000008777) spopla (ENSECRG00000008694) hnmt (ENSECRG00000008654) THSD7B (ENSECRG00000008604) cxcr4a (ENSECRG00000008578) Neopterygii ANCESTRAL SPECIES 1 ENSGT00940000158559 ENSGT00940000156095 ENSGT00940000160205 ENSGT00940000165390 ENSGT00530000063686.a.a ENSGT01100000263596 ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B ENSGT00390000000220.A ENSGT00940000158539 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.a.a ENSGT00940000157521.b ENSGT00940000167103 ENSGT00940000166136 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862.ub ENSGT00390000002862.tb ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F Osteoglossocephalai ANCESTRAL SPECIES 18 ENSGT00940000157541.f ENSGT01100000263596 ENSGT00940000157541.e ENSGT00390000015050.`b.a ENSGT00390000000220.B.c.a ENSGT00940000158539.b ENSGT00390000015050.`b.b ENSGT00390000000220.B.d ENSGT00390000000220.B.c.b ENSGT00390000000220.A ENSGT00940000158539.a ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233 ENSGT00950000183208.A.c.a #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.a.a ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b ENSGT00950000183114.a.b.b ENSGT00940000160639.b.b ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000160532.g ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b Clupeocephala ANCESTRAL SPECIES 110 ENSGT01100000263596 ENSGT00940000157541.e ENSGT00390000015050.`b.b ENSGT00390000000220.B.d ENSGT00940000158539.b ENSGT00390000000220.B.c.a ENSGT00940000157541.f ENSGT00390000015050.`b.a ENSGT00390000000220.B.c.b ENSGT00390000000220.A ENSGT00940000158539.a ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000157521.a.b ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.b.a.b.b.a ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000160532.g ENSGT00940000154486.b.a.a.b.e.a.b ENSGT00940000154486.b.b.b ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a Otomorpha ANCESTRAL SPECIES 151 ENSGT01070000254828 ENSGT00940000154801.n ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000157521.a.b ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.b.a.b.b.a ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000160532.g ENSGT00940000154486.b.a.a.b.e.a.b ENSGT00940000154486.b.b.b ENSGT00940000155311.B Clupeiformes ANCESTRAL SPECIES 46 ENSGT00940000158239.a.a.d ENSGT00940000159606 ENSGT00940000155861.C.e ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00940000163253.b.c.a.e ENSGT00500000044939 ENSGT00940000156180.e ENSGT00390000001225 ENSGT00390000005581.a ENSGT00940000167649 ENSGT00940000158526 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000157521.a.b ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.b.a.b.b.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000160532.g ENSGT00940000154486.b.a.a.b.e.a.b ENSGT00940000154486.b.b.b ENSGT00940000155311.B ENSGT00530000063599.B.g ENSGT00390000006330.a.a.b Atlantic herring MODERN SPECIES 13 ALS2 (ENSCHAG00000007884) MPP4 (ENSCHAG00000008043) tmem237b (ENSCHAG00000009153) zp2l2 (ENSCHAG00000009198) cyp20a1 (ENSCHAG00000009217) ENSCHAG00000009301 cnot9 (ENSCHAG00000011642) ftcd (ENSCHAG00000011671) ENSCHAG00000011727 mstna (ENSCHAG00000011741) ENSCHAG00000011749 ENSCHAG00000011763 ENSCHAG00000011781 orc4 (ENSCHAG00000011816) ACVR2A (ENSCHAG00000012241) zeb2b (ENSCHAG00000012603) #22 KYNU (ENSCHAG00000012715) #28 ENSCHAG00000012946 ENSCHAG00000013076 ENSCHAG00000013112 ENSCHAG00000015514 ENSCHAG00000015535 ENSCHAG00000015680 bzw1a (ENSCHAG00000015687) aox5 (ENSCHAG00000015811) ENSCHAG00000017795 ARL4C (ENSCHAG00000019417) sh3bp4a (ENSCHAG00000019425) s100b (ENSCHAG00000019461) ENSCHAG00000019566 ahr1b (ENSCHAG00000022603) Denticle herring MODERN SPECIES 15 sumo1 (ENSDCDG00000002518) fzd7b (ENSDCDG00000002516) cdk15 (ENSDCDG00000002501) ALS2 (ENSDCDG00000002468) MPP4 (ENSDCDG00000002418) zp2l2 (ENSDCDG00000002409) tmem237b (ENSDCDG00000002406) cyp20a1 (ENSDCDG00000002398) ENSDCDG00000001319 cnot9 (ENSDCDG00000001090) ftcd (ENSDCDG00000001081) mstna (ENSDCDG00000001073) MBD5 (ENSDCDG00000001067) orc4 (ENSDCDG00000001038) ACVR2A (ENSDCDG00000000525) zeb2b (ENSDCDG00000000270) #22 ENSDCDG00000000205 KYNU (ENSDCDG00000026942) #28 LRP1B (ENSDCDG00000026680) ENSDCDG00000026623 ENSDCDG00000026619 bzw1a (ENSDCDG00000026614) AOX1 (ENSDCDG00000026445) ENSDCDG00000026431 sh3bp4a (ENSDCDG00000026424) s100b (ENSDCDG00000026423) ENSDCDG00000025184 ENSDCDG00000025127 ENSDCDG00000025123 ahr2 (ENSDCDG00000025118) ahr1b (ENSDCDG00000024571) Otophysi ANCESTRAL SPECIES 8 ENSGT00390000000220.B.d ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000155025.B.i ENSGT00940000157017.a.b.b ENSGT00940000156498.h ENSGT00940000155698.A ENSGT00940000157307.g.b ENSGT00940000164021.B.a ENSGT00940000165011.a ENSGT00940000160265.g ENSGT00390000017030.b.b ENSGT01050000244893.c.a.b.h ENSGT00870000136549 ENSGT00950000182935.B.b.c ENSGT00510000048276 ENSGT00390000008221.a Characiphysae ANCESTRAL SPECIES 18 ENSGT00940000161625.m ENSGT00390000014995 ENSGT00390000003896 ENSGT00530000063480.a ENSGT01050000244956.b.w.b ENSGT00940000163148.a.a ENSGT00940000163322.a.a.b ENSGT00940000163494.a.a.c.a.b ENSGT00950000183003.a.a.b.c.a ENSGT00940000155238.y.a ENSGT00390000000220.B.d ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000155025.B.i.l ENSGT00940000155025.B.i.k ENSGT00940000157017.a.b.b ENSGT00940000155698.A ENSGT00940000158594.od ENSGT00940000157307.g.b ENSGT00940000164021.B.a ENSGT00940000165011.a ENSGT00940000160265.g ENSGT00390000017030.b.b ENSGT00390000002667 ENSGT01050000244893.c.a.b.h ENSGT00870000136549 ENSGT00950000182935.B.b.c Channel catfish MODERN SPECIES 3 ENSIPUG00000018211 ENSIPUG00000018199 ENSIPUG00000018196 ENSIPUG00000018185 gulp1b (ENSIPUG00000018114) nmnat1 (ENSIPUG00000018100) calcrl (ENSIPUG00000018077) zswim2 (ENSIPUG00000018064) fam171b (ENSIPUG00000018056) march7 (ENSIPUG00000018025) ENSIPUG00000017957 ENSIPUG00000017871 wdsub1 (ENSIPUG00000017850) BAZ2B (ENSIPUG00000017681) ENSIPUG00000017663 zeb2b (ENSIPUG00000017622) #22 ENSIPUG00000017602 #23 ENSIPUG00000017596 Kynu (ENSIPUG00000017535) #28 ENSIPUG00000017528 gal1b (ENSIPUG00000017485) ENSIPUG00000017478 ADAP1 (ENSIPUG00000017448) ENSIPUG00000017427 grap2b (ENSIPUG00000017405) fam83fb (ENSIPUG00000017393) CYTH2 (ENSIPUG00000017336) ENSIPUG00000017329 CUTA (ENSIPUG00000017318) eif3d (ENSIPUG00000017267) ENSIPUG00000017252 Characiphysae_b ANCESTRAL SPECIES 46 ENSGT00940000161625.m ENSGT00390000014995 ENSGT00390000003896 ENSGT00530000063480.a ENSGT01050000244956.b.w.b ENSGT00940000163148.a.a ENSGT00940000163322.a.a.b ENSGT00940000163494.a.a.c.a.b ENSGT00950000183003.a.a.b.c.a ENSGT00940000155238.y.a ENSGT00390000000220.B.d ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000155025.B.i.l ENSGT00940000155025.B.i.k ENSGT00940000157017.a.b.b ENSGT00940000155698.A ENSGT00940000158594.od ENSGT00940000157307.g.b ENSGT00940000164021.B.a ENSGT00940000165011.a ENSGT00940000160265.g ENSGT00390000017030.b.b ENSGT00390000002667 ENSGT01050000244893.c.a.b.h ENSGT00870000136549 ENSGT00950000182935.B.b.c Characoidei ANCESTRAL SPECIES 23 ENSGT00940000163322.b ENSGT00940000164501.b ENSGT00940000163148.a.a.c.b ENSGT00940000163148.a.b.a ENSGT00940000163148.a.a.d ENSGT00940000163148.a.a.c.a ENSGT00940000163322.a.a.b ENSGT00940000163494.a.a.c.a.b ENSGT00950000183003.a.a.b.c.a ENSGT00940000155238.y.a ENSGT00390000000220.B.d ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000155025.B.i.l ENSGT00940000155025.B.i.k ENSGT00940000157017.a.b.b ENSGT00940000155698.A ENSGT00940000158594.od ENSGT00940000157307.g.b ENSGT00940000164021.B.a ENSGT00940000165011.a ENSGT00940000160265.g ENSGT00390000017030.b.b ENSGT00390000002667 ENSGT01050000244893.c.a.b.h ENSGT00870000136549 ENSGT00950000182935.B.b.c Red-bellied piranha MODERN SPECIES 81 ENSPNAG00000023232 crygm7 (ENSPNAG00000023361) ENSPNAG00000023381 ENSPNAG00000023465 ENSPNAG00000023484 ENSPNAG00000023504 ENSPNAG00000023511 ENSPNAG00000023516 sowahcb (ENSPNAG00000003772) SEPTIN10 (ENSPNAG00000023575) ENSPNAG00000005251 KIF5C (ENSPNAG00000023684) MBD5 (ENSPNAG00000023697) orc4 (ENSPNAG00000023741) ACVR2A (ENSPNAG00000023798) zeb2b (ENSPNAG00000023882) #22 KYNU (ENSPNAG00000023936) #28 lgals2b (ENSPNAG00000023976) lgals2b (ENSPNAG00000023985) ENSPNAG00000023994 ADAP1 (ENSPNAG00000005589) ENSPNAG00000024090 ENSPNAG00000024100 ENSPNAG00000024140 grap2b (ENSPNAG00000024181) fam83fb (ENSPNAG00000024206) cyth4b (ENSPNAG00000024229) Mexicana tetra MODERN SPECIES 50 pop4 (ENSAMXG00000002899) PLEKHF1 (ENSAMXG00000024970) C19orf12 (ENSAMXG00000035732) C19orf12 (ENSAMXG00000037694) si:ch211-260e23.9 (ENSAMXG00000002904) zgc:162297 (ENSAMXG00000002912) ccne1 (ENSAMXG00000002929) nae1 (ENSAMXG00000002934) ENSAMXG00000042116 dync1li2 (ENSAMXG00000002954) cmtm4 (ENSAMXG00000002966) cmtm3 (ENSAMXG00000002968) CKLF (ENSAMXG00000036918) tk2 (ENSAMXG00000033168) ENSAMXG00000043784 zeb2b (ENSAMXG00000008022) #22 ENSAMXG00000033676 ENSAMXG00000039075 Electric eel MODERN SPECIES 330 zeb2b (ENSEEEG00000024618) #22 AP3B1 (ENSEEEG00000024617) ENSEEEG00000024616 tbca (ENSEEEG00000024615) otpa (ENSEEEG00000024614) wdr41 (ENSEEEG00000024613) PDE8B (ENSEEEG00000024611) aggf1 (ENSEEEG00000024610) crhbp (ENSEEEG00000024609) s100z (ENSEEEG00000024607) ch25hl2 (ENSEEEG00000024606) Cyprinoidei ANCESTRAL SPECIES 103 ENSGT00940000162556.E.a.h.a ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000155025.B.i ENSGT00940000157017.a.b.b ENSGT00940000156498.h ENSGT00940000157307.g.b ENSGT00940000164021.B.a ENSGT00940000165011.a ENSGT00940000160265.g ENSGT00390000017030.b.b ENSGT01050000244893.c.a.b.h ENSGT00870000136549 ENSGT00990000210186 ENSGT00950000183184.b.b ENSGT00950000182935.B.b.c ENSGT00510000048276 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.m #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.m #22 Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 558 zeb2b (ENSSGRG00000043752) #22 ENSSGRG00000043750 #28 ENSSGRG00000043746 ENSSGRG00000043745 zgc:92360 (ENSSGRG00000043743) Golden-line barbel MODERN SPECIES 645 zeb2b (ENSSGRG00000044721) #22 lgals2b (ENSSGRG00000044713) zgc:92360 (ENSSGRG00000044712) ENSSGRG00000044703 grap2b (ENSSGRG00000044699) fam83fb (ENSSGRG00000044697) ENSSGRG00000044695 cacng2b (ENSSGRG00000044694) ENSSGRG00000044679 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.n.a #22 Cyprininae_a ANCESTRAL SPECIES 889 ENSGT00950000183208.A.c.a.n.a #22 ENSGT00390000008033.l #28 ENSGT00940000155025.B.i.m.a Common carp reference MODERN SPECIES 10 ENSCCRG00000078607 ENSCCRG00000024092 txnrd3 (ENSCCRG00000017758) ENSCCRG00000018844 zgc:158417 (ENSCCRG00000055994) ORC4 (ENSCCRG00000064660) ENSCCRG00000069063 ENSCCRG00000054956 ENSCCRG00000010987 ENSCCRG00000054977 ENSCCRG00000067830 ENSCCRG00000073094 ENSCCRG00000066772 ENSCCRG00000011928 ENSCCRG00000000215 zeb2b (ENSCCRG00000000445) #22 ENSCCRG00000057337 ENSCCRG00000064238 #28 zgc:92360 (ENSCCRG00000071459) lgals2b (ENSCCRG00000064629) ENSCCRG00000072249 ENSCCRG00000009380 ENSCCRG00000075754 grap2b (ENSCCRG00000064710) fam83fb (ENSCCRG00000059993) cyth4b (ENSCCRG00000071297) ENSCCRG00000071544 ENSCCRG00000055358 ENSCCRG00000073361 ENSCCRG00000001823 ENSCCRG00000075800 Goldfish MODERN SPECIES 46 ENSCARG00000026328 ENSCARG00000026425 tpra1 (ENSCARG00000026440) chchd6b (ENSCARG00000026746) PLXNA1 (ENSCARG00000026874) txnrd3 (ENSCARG00000028520) ENSCARG00000028753 orc4 (ENSCARG00000028779) ENSCARG00000028913 ube3a (ENSCARG00000029227) ENSCARG00000029788 ENSCARG00000029798 ENSCARG00000029816 ENSCARG00000029825 ENSCARG00000029840 zeb2b (ENSCARG00000029862) #22 lgals2b (ENSCARG00000030117) ENSCARG00000030143 zgc:92360 (ENSCARG00000030164) ENSCARG00000030409 ENSCARG00000031314 ENSCARG00000031365 ENSCARG00000031488 ENSCARG00000031504 ENSCARG00000031509 grap2b (ENSCARG00000031512) fam83fb (ENSCARG00000031522) cyth4b (ENSCARG00000031531) ENSCARG00000031540 ENSCARG00000031547 cacng2b (ENSCARG00000031562) Cyprininae ANCESTRAL SPECIES 526 ENSGT00950000183208.A.c.a.n.b #22 ENSGT00390000008033 #28 ENSGT00940000155025.B.i.m.b ENSGT00940000156498.h.a.b ENSGT00940000158594.kd.b ENSGT00940000155025.B.i.m.a ENSGT00940000157017.a.b.b ENSGT00940000156498.h.a.a ENSGT00940000158594.kd.a ENSGT00940000157307.g.b ENSGT00940000164021.B.a.a.a ENSGT00940000165011.a.b ENSGT00940000164021.B.a.a.b ENSGT00940000165011.a.a ENSGT00940000160265.g ENSGT00390000017030.b.b Cyprininae_a ANCESTRAL SPECIES 544 ENSGT00950000183208.A.c.a.n.b #22 ENSGT00390000008033.k #28 ENSGT00940000155025.B.i.m.b ENSGT00940000156498.h.a.b ENSGT00940000158594.kd.b ENSGT00940000164021.B.a.a.b ENSGT00940000165011.a.a ENSGT00940000160265.g ENSGT00390000017030.b.b ENSGT01050000244893.c.a.b.h.b.a ENSGT00870000136549 ENSGT00510000048276 ENSGT00390000008221.a.b Common carp reference MODERN SPECIES 16 ENSCCRG00000022809 tpra1 (ENSCCRG00000026158) ENSCCRG00000041984 ENSCCRG00000051875 ENSCCRG00000077951 ENSCCRG00000062474 ENSCCRG00000022925 txnrd3 (ENSCCRG00000070776) zgc:158417 (ENSCCRG00000017741) ORC4 (ENSCCRG00000016857) ENSCCRG00000062267 ENSCCRG00000070168 ENSCCRG00000061762 ENSCCRG00000075175 ENSCCRG00000074611 zeb2b (ENSCCRG00000019659) #22 ENSCCRG00000028800 #28 lgals2b (ENSCCRG00000048643) zgc:92360 (ENSCCRG00000048640) ENSCCRG00000026634 fam83fb (ENSCCRG00000069866) cyth4b (ENSCCRG00000005850) ENSCCRG00000023775 ENSCCRG00000041272 ENSCCRG00000034847 ENSCCRG00000031227 ENSCCRG00000072481 ENSCCRG00000045152 ENSCCRG00000063366 ENSCCRG00000071368 pde6ha (ENSCCRG00000063430) Goldfish MODERN SPECIES 2566 ENSCARG00000042284 zeb2b (ENSCARG00000041910) #22 Zebrafish MODERN SPECIES 21 DLGAP4 (ENSDARG00000012823) ENSDARG00000112895 myl9b (ENSDARG00000008030) ENSDARG00000105182 zgc:113442 (ENSDARG00000101906) zgc:158417 (ENSDARG00000101671) orc4 (ENSDARG00000101161) ENSDARG00000104700 ENSDARG00000015563 ENSDARG00000079884 tpra1 (ENSDARG00000054930) chchd6b (ENSDARG00000045978) PLXNA1 (ENSDARG00000114823) ENSDARG00000114386 txnrd3 (ENSDARG00000100374) zeb2b (ENSDARG00000078416) #22 ENSDARG00000099546 #28 lgals2b (ENSDARG00000038153) ENSDARG00000096322 zgc:92360 (ENSDARG00000038151) ENSDARG00000096307 ENSDARG00000115741 grap2b (ENSDARG00000101169) fam83fb (ENSDARG00000104188) cyth4b (ENSDARG00000103984) ENSDARG00000103662 ENSDARG00000099309 pde6ha (ENSDARG00000102558) rbfox2 (ENSDARG00000052182) atf4a (ENSDARG00000111939) ENSDARG00000091124 Euteleosteomorpha ANCESTRAL SPECIES 140 ENSGT00940000153470.a.a.a.a ENSGT00390000001170.a.b ENSGT00940000155759.e.b ENSGT00940000168614 ENSGT00940000158559 ENSGT00940000156095.m.a ENSGT01100000263596 ENSGT00940000157541.e ENSGT00390000015050.`b.b ENSGT00390000000220.B.d ENSGT00390000000220.B.c.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000157521.a.b ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.b.a.b.b.a ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000160532.g ENSGT00940000154486.b.a.a.b.e.a.b ENSGT00940000154486.b.b.b ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a Protacanthopterygii ANCESTRAL SPECIES 27 ENSGT00950000183030.d ENSGT00940000157128 ENSGT00730000111163 ENSGT00940000155759.e.b ENSGT00940000168614 ENSGT00940000158559 ENSGT00940000156095.m.a ENSGT01100000263596 ENSGT00940000157541.e ENSGT00390000015050.`b.b ENSGT00390000000220.B.c.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000157521.a.b ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.b.a.b.b.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000160532.g ENSGT00940000154486.b.a.a.b.e.a.b ENSGT00940000154486.b.b.b.a ENSGT00940000155311.B ENSGT00530000063599.B.m ENSGT00390000006330.a.a.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 110 ENSGT00940000159505.v.a ENSGT00940000157065.y.b ENSGT00990000205068.b ENSGT00940000157065.y.a.a ENSGT00390000013113.u ENSGT00940000153577.A ENSGT00510000046499.r.a ENSGT00730000110915.b.c.a ENSGT01050000244864.C.f.a ENSGT01050000244864.D.t ENSGT00940000157784.c.d ENSGT00940000156556.h.d ENSGT00520000055635.c.a.a.b.e.b ENSGT00390000003873.n.b ENSGT00940000157233.c.b ENSGT00950000183208.A.c.a.o #22 ENSGT00390000008033.s.a #28 ENSGT00940000157521.a.b.b ENSGT00940000160835.e.a ENSGT00990000204278 ENSGT00940000156556.h.c ENSGT00520000055635.c.a.a.b.e.a ENSGT00390000003873.n.a ENSGT00940000157233.c.a ENSGT00950000183208.A.c.a.p #22 ENSGT00390000008033.s.b #28 ENSGT00940000160835.e.b ENSGT00940000166136.c ENSGT00390000012561.b.pb.b.c.a.a ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b.d Salmoninae_a ANCESTRAL SPECIES 66 ENSGT00950000182836.b.b.b.a.l.a ENSGT00390000003874.a.b.b ENSGT00940000158589.b.b.d.a.b ENSGT00940000159505.v.b ENSGT00940000157065.z ENSGT00390000013113.v ENSGT00730000110915.b.c.b ENSGT01050000244864.C.f.b ENSGT01050000244864.D.t.a ENSGT00940000157784.c.d.f.a ENSGT00940000156556.h.d ENSGT00520000055635.c.a.a.b.e.b ENSGT00390000003873.n.b ENSGT00390000010372.o.a ENSGT00940000157233.c.b ENSGT00950000183208.A.c.a.o #22 ENSGT00390000008033.s.a #28 ENSGT00940000157521.a.b.a ENSGT00940000167103.c ENSGT00940000166136.d ENSGT00390000012561.b.pb.b.d ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b.c.a.a ENSGT00940000166136.c ENSGT00940000167103.d ENSGT00940000157521.a.b.b ENSGT00390000008033.s.b #28 ENSGT00950000183208.A.c.a.p #22 ENSGT00940000157233.c.a ENSGT00390000003873.n.a ENSGT00520000055635.c.a.a.b.e.a Salmo ANCESTRAL SPECIES 48 ENSGT00390000003874.a.b.b ENSGT00940000159505.v.b ENSGT00940000157065.y.a.b ENSGT00390000013113.v ENSGT00730000110915.b.c.b ENSGT01050000244864.C.f.b ENSGT01050000244864.D.t.a ENSGT00940000157784.c.d.e ENSGT00940000157784.c.d.f.a ENSGT00940000156556.h.d ENSGT00520000055635.c.a.a.a ENSGT00390000010372.o.a.b ENSGT00390000003873.n.b ENSGT00390000010372.o.a.a ENSGT00940000157233.c.b ENSGT00950000183208.A.c.a.o #22 ENSGT00390000008033.s.b #28 ENSGT00940000157521.a.b.a ENSGT00940000167103.c ENSGT00940000166136.d ENSGT00390000012561.b.pb.b.d ENSGT00940000160639.b.a.b.b.a.a ENSGT00390000013151.a.a.a.c ENSGT00940000161997.a.i ENSGT00940000160532.g.g ENSGT00940000154486.b.a.a.b.e.a.b.f ENSGT00940000154486.b.b.b.a.a ENSGT00530000063599.B.m.b ENSGT00390000006330.a.a.b.d ENSGT00390000010463.a.b.c.a.e ENSGT01050000244905.A.a.m Atlantic salmon MODERN SPECIES 7 pknx1 (ENSSSAG00000009247) ENSSSAG00000009270 ENSSSAG00000009516 cryzl1 (ENSSSAG00000042514) bcl9 (ENSSSAG00000042658) gja5b (ENSSSAG00000042741) gja8b (ENSSSAG00000101148) fstl1a (ENSSSAG00000042764) lrrc58a (ENSSSAG00000042935) GSK3B (ENSSSAG00000095698) ENSSSAG00000089311 ENSSSAG00000007805 ENSSSAG00000111645 ENSSSAG00000119084 ENSSSAG00000044402 ENSSSAG00000050763 #22 ENSSSAG00000118719 ENSSSAG00000050936 #28 ENSSSAG00000051656 ENSSSAG00000058438 ENSSSAG00000104403 bzw1a (ENSSSAG00000108291) aox5 (ENSSSAG00000058981) ENSSSAG00000087803 sh3bp4a (ENSSSAG00000069340) ENSSSAG00000069404 ahr2d (ENSSSAG00000071319) ahr1b (ENSSSAG00000071494) ENSSSAG00000071938 mfsd6a (ENSSSAG00000071941) nab1a (ENSSSAG00000087426) River trout MODERN SPECIES 36 ENSSTUG00000015335 ENSSTUG00000015341 ITSN1 (ENSSTUG00000015611) cryzl1 (ENSSTUG00000017394) bcl9 (ENSSTUG00000017500) gja5b (ENSSTUG00000017522) ENSSTUG00000017526 gja8b (ENSSTUG00000017529) fstl1a (ENSSTUG00000017559) lrrc58a (ENSSTUG00000017989) gsk3ba (ENSSTUG00000018010) ENSSTUG00000018115 TRAPPC10 (ENSSTUG00000018176) ENSSTUG00000019153 ENSSTUG00000019214 zeb2b (ENSSTUG00000020219) #22 ENSSTUG00000020296 #28 ENSSTUG00000020404 ENSSTUG00000021533 ENSSTUG00000021539 ENSSTUG00000021621 bzw1a (ENSSTUG00000021656) aox5 (ENSSTUG00000023990) ARL4C (ENSSTUG00000050415) sh3bp4a (ENSSTUG00000050422) s100b (ENSSTUG00000050427) ENSSTUG00000050431 ahr2 (ENSSTUG00000050438) ENSSTUG00000050442 ahr1b (ENSSTUG00000050452) ENSSTUG00000050473 Oncorhynchus ANCESTRAL SPECIES 43 ENSGT00950000182836.b.b.b.a.l.a ENSGT00390000003874.a.b.b ENSGT00940000158589.b.b.d.a.b ENSGT00940000159505.v.b ENSGT00940000157065.z ENSGT00390000013113.v ENSGT00730000110915.b.c.b ENSGT01050000244864.C.f.b ENSGT01050000244864.D.t.a ENSGT00940000157784.c.d.f.a ENSGT00940000156556.h.d ENSGT00520000055635.c.a.a.b.e.b ENSGT00390000003873.n.b ENSGT00390000010372.o.a ENSGT00940000157233.c.b ENSGT00950000183208.A.c.a.o #22 ENSGT00390000008033.s.a #28 ENSGT00940000157521.a.b.a ENSGT00940000167103.c ENSGT00940000166136.d ENSGT00390000012561.b.pb.b.d ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b.c.a.a ENSGT00940000166136.c ENSGT00940000167103.d ENSGT00940000157521.a.b.b ENSGT00390000008033.s.b #28 ENSGT00950000183208.A.c.a.p #22 ENSGT00940000157233.c.a ENSGT00390000003873.n.a ENSGT01000000220200 Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00950000182836.b.b.b.a.l.a ENSGT00390000003874.a.b.b ENSGT00940000158589.b.b.d.a.b ENSGT00940000159505.v.b ENSGT00940000157065.z ENSGT00390000013113.v ENSGT00730000110915.b.c.b ENSGT01050000244864.C.f.b ENSGT01050000244864.D.t.a ENSGT00940000157784.c.d.f.b ENSGT00940000156556.h.d ENSGT00520000055635.c.a.a.b.e.b ENSGT00390000003873.n.b ENSGT00390000010372.o.a ENSGT00940000157233.c.b ENSGT00950000183208.A.c.a.o #22 ENSGT00390000008033.s.a #28 ENSGT00940000157521.a.b.a ENSGT00940000167103.c ENSGT00940000166136.d ENSGT00390000012561.b.pb.b.d ENSGT00950000183114.a.b.b ENSGT00940000160639.b.a.b.b.a.a ENSGT00390000013151.a.a.a.c ENSGT00940000161997.a.i ENSGT00940000160532.g.g ENSGT00940000154486.b.a.a.b.e.a.b.f ENSGT00940000154486.b.b.b.a.a ENSGT00530000063599.B.m.b ENSGT00530000063599.B.m.a.b ENSGT00390000006330.a.a.b.d Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 31 pdxkb (ENSOTSG00005022300) ENSOTSG00005022305 ENSOTSG00005022306 ITSN1 (ENSOTSG00005022307) cryzl1 (ENSOTSG00005022413) bcl9 (ENSOTSG00005022419) gja5b (ENSOTSG00005022422) gja8b (ENSOTSG00005022423) fstl1a (ENSOTSG00005022427) lrrc58a (ENSOTSG00005022430) gsk3ba (ENSOTSG00005022442) TRAPPC10 (ENSOTSG00005023480) zgc:194242 (ENSOTSG00005023527) ENSOTSG00005023534 ENSOTSG00005024671 zeb2b (ENSOTSG00005024672) #22 ENSOTSG00005024717 #28 ENSOTSG00005024722 ENSOTSG00005024732 ENSOTSG00005024733 ENSOTSG00005024735 bzw1a (ENSOTSG00005024737) aox5 (ENSOTSG00005024759) ARL4C (ENSOTSG00005027585) sh3bp4a (ENSOTSG00005027586) s100b (ENSOTSG00005027588) ENSOTSG00005027591 ahr2 (ENSOTSG00005027595) ahr1b (ENSOTSG00005027603) ENSOTSG00005027606 mfsd6a (ENSOTSG00005027610) Chinook salmon MODERN SPECIES 5 pdxkb (ENSOTSG00005044714) ENSOTSG00005044709 ENSOTSG00005044707 ENSOTSG00005044504 cryzl1 (ENSOTSG00005044501) bcl9 (ENSOTSG00005044498) gja5b (ENSOTSG00005044497) gja8b (ENSOTSG00005044496) fstl1a (ENSOTSG00005044471) lrrc58a (ENSOTSG00005044465) gsk3ba (ENSOTSG00005044041) TRAPPC10 (ENSOTSG00005044030) zgc:194242 (ENSOTSG00005044029) ENSOTSG00005043690 ENSOTSG00005043687 zeb2b (ENSOTSG00005043615) #22 ENSOTSG00005043609 #28 ENSOTSG00005043605 ENSOTSG00005043591 ENSOTSG00005043573 ENSOTSG00005043572 bzw1a (ENSOTSG00005043571) aox5 (ENSOTSG00005042834) ARL4C (ENSOTSG00005042816) sh3bp4a (ENSOTSG00005042815) s100b (ENSOTSG00005042814) ENSOTSG00005042813 ahr2 (ENSOTSG00005042811) ENSOTSG00005042810 ahr1b (ENSOTSG00005042808) mfsd6a (ENSOTSG00005042807) Coho salmon MODERN SPECIES 7 agpat3 (ENSOKIG00005030992) pdxkb (ENSOKIG00005031043) PKNOX1 (ENSOKIG00005031285) ENSOKIG00005031299 ITSN1 (ENSOKIG00005031417) cryzl1 (ENSOKIG00005032013) bcl9 (ENSOKIG00005032136) gja5b (ENSOKIG00005032228) gja8b (ENSOKIG00005032234) fstl1a (ENSOKIG00005032248) lrrc58a (ENSOKIG00005032318) GSK3B (ENSOKIG00005032382) TRAPPC10 (ENSOKIG00005032949) ENSOKIG00005033373 ENSOKIG00005033422 ZEB2 (ENSOKIG00005034051) #22 ENSOKIG00005034109 KYNU (ENSOKIG00005034121) #28 ENSOKIG00005034234 ENSOKIG00005035002 ENSOKIG00005035046 bzw1a (ENSOKIG00005035073) aox5 (ENSOKIG00005037375) ENSOKIG00005050768 S100B (ENSOKIG00005050770) ARL4C (ENSOKIG00005050771) sh3bp4a (ENSOKIG00005050774) ENSOKIG00005050777 ahr2 (ENSOKIG00005050781) ahr1b (ENSOKIG00005050793) mfsd6a (ENSOKIG00005050799) Rainbow trout MODERN SPECIES 9 agpat3 (ENSOMYG00000026986) ENSOMYG00000026885 ENSOMYG00000026780 ENSOMYG00000025910 cryzl1 (ENSOMYG00000025324) bcl9 (ENSOMYG00000025199) gja5b (ENSOMYG00000025151) gja8b (ENSOMYG00000025145) fstl1a (ENSOMYG00000068136) lrrc58a (ENSOMYG00000024988) GSK3B (ENSOMYG00000024692) ENSOMYG00000024550 ENSOMYG00000023464 ENSOMYG00000022909 ENSOMYG00000049283 ENSOMYG00000022771 #22 ENSOMYG00000022709 #28 ENSOMYG00000059790 ENSOMYG00000066520 ENSOMYG00000022553 ENSOMYG00000022532 bzw1a (ENSOMYG00000022459) aox5 (ENSOMYG00000021465) ENSOMYG00000020913 sh3bp4a (ENSOMYG00000020902) s100b (ENSOMYG00000020886) ENSOMYG00000020864 ahr2 (ENSOMYG00000020725) ENSOMYG00000020677 ahr1b (ENSOMYG00000020656) mfsd6a (ENSOMYG00000020644) Huchen MODERN SPECIES 1398 zeb2b (ENSHHUG00000043170) #22 KYNU (ENSHHUG00000043161) #28 Salmoninae ANCESTRAL SPECIES 110 ENSGT01050000244864.D.t ENSGT00940000157784.c.d ENSGT00940000156556.h.d ENSGT00520000055635.c.a.a.b.e.b ENSGT00390000003873.n.b ENSGT00940000157233.c.b ENSGT00950000183208.A.c.a.o #22 ENSGT00390000008033.s.a #28 ENSGT00940000157521.a.b.b ENSGT00940000160835.e.a ENSGT00990000204278 ENSGT00940000156556.h.c ENSGT00520000055635.c.a.a.b.e.a ENSGT00390000003873.n.a ENSGT00940000157233.c.a ENSGT00950000183208.A.c.a.p #22 ENSGT00390000008033.s.b #28 ENSGT00940000160835.e.b ENSGT00940000166136.c ENSGT00390000012561.b.pb.b.c.a.a ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b.d ENSGT00940000166136.d ENSGT00940000167103 ENSGT00940000157521.a.b.a ENSGT00940000160639.b.a.b.b.a.b ENSGT00390000013151.a.a.a.d ENSGT00940000161997.a.j ENSGT00940000160532.g.h ENSGT00940000160532.h.d.b ENSGT00530000065251.m.a Salmoninae_a ANCESTRAL SPECIES 66 ENSGT00940000159505.v.a ENSGT00990000205068.b ENSGT00940000157065.y.a.a ENSGT00940000157065.y.b ENSGT00390000013113.u ENSGT00940000153577.A ENSGT00510000046499.r.a ENSGT00730000110915.b.c.a ENSGT01050000244864.C.f.a ENSGT01050000244864.D.t.b ENSGT00940000157784.c.d.f.b ENSGT00940000156556.h.c ENSGT00520000055635.c.a.a.b.e.a ENSGT00390000003873.n.a ENSGT00940000157233.c.a ENSGT00950000183208.A.c.a.p #22 ENSGT00390000008033.s.b #28 ENSGT00940000157521.a.b.b ENSGT00940000167103.d ENSGT00940000166136.c ENSGT00390000012561.b.pb.b.c.a.a ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b.d ENSGT00940000166136.d ENSGT00940000167103.c ENSGT00940000157521.a.b.a ENSGT00390000008033.s.a #28 ENSGT00950000183208.A.c.a.o #22 ENSGT00940000157233.c.b ENSGT00390000010372.o.a ENSGT00390000003873.n.b Salmo ANCESTRAL SPECIES 41 ENSGT00940000159505.v.a ENSGT00990000205068.b ENSGT00940000157065.y.a.a ENSGT00390000013113.u ENSGT00940000153577.A ENSGT00510000046499.r.a ENSGT00730000110915.b.c.a ENSGT01050000244864.C.f.a ENSGT01050000244864.D.t.b ENSGT00940000157784.c.d.f.b ENSGT00940000156556.h.c ENSGT00520000055635.c.a.a.b.e.a ENSGT00390000010372.o.b.a ENSGT00390000003873.n.a ENSGT00940000157233.c.a ENSGT00950000183208.A.c.a.p #22 ENSGT00390000008033.s.a #28 ENSGT00940000157521.a.b.b ENSGT00940000167103.d ENSGT00940000166136.c ENSGT00390000012561.b.pb.b.c.b ENSGT00950000183114.a.b.b ENSGT00940000160639.b.a.b.b.a.b ENSGT00390000013151.a.a.a.d ENSGT00940000161997.a.j ENSGT00940000160532.g.h ENSGT00940000154486.b.a.a.b.e.a.b.e ENSGT00940000169027.c.a ENSGT00940000153773.a.b ENSGT00940000154486.b.b.b.a.b ENSGT00940000155311.B Atlantic salmon MODERN SPECIES 8 bcl9 (ENSSSAG00000007293) gja5b (ENSSSAG00000120725) gja8b (ENSSSAG00000007356) fstl1a (ENSSSAG00000007369) LRC58 (ENSSSAG00000007504) GSK3B (ENSSSAG00000082990) ENSSSAG00000113930 ENSSSAG00000084610 ENSSSAG00000082370 ENSSSAG00000119875 ENSSSAG00000101072 ENSSSAG00000109868 ENSSSAG00000083284 ENSSSAG00000044053 ENSSSAG00000007982 ENSSSAG00000015043 #22 ENSSSAG00000016689 #28 ENSSSAG00000023548 ENSSSAG00000039284 ENSSSAG00000114401 bzw1a (ENSSSAG00000058485) ENSSSAG00000039600 ENSSSAG00000112062 sh3bp4a (ENSSSAG00000040750) S100B (ENSSSAG00000040846) ENSSSAG00000040976 ahr2g (ENSSSAG00000045517) ENSSSAG00000122068 ahr1b (ENSSSAG00000088295) ENSSSAG00000045960 ENSSSAG00000045973 River trout MODERN SPECIES 32 ENSSTUG00000040236 ITSN1 (ENSSTUG00000039403) cryzl1 (ENSSTUG00000039269) setd4 (ENSSTUG00000039243) cbr1 (ENSSTUG00000039226) bcl9 (ENSSTUG00000039167) gja5b (ENSSTUG00000039159) gja8b (ENSSTUG00000039157) fstl1a (ENSSTUG00000038946) lrrc58a (ENSSTUG00000038928) gsk3ba (ENSSTUG00000038559) ENSSTUG00000038537 TRAPPC10 (ENSSTUG00000038469) ENSSTUG00000037681 ENSSTUG00000037652 zeb2b (ENSSTUG00000037599) #22 ENSSTUG00000037562 #28 ENSSTUG00000037512 ENSSTUG00000037507 bzw1a (ENSSTUG00000037155) ENSSTUG00000037114 ENSSTUG00000032807 ARL4C (ENSSTUG00000032669) sh3bp4a (ENSSTUG00000032651) s100b (ENSSTUG00000032637) ENSSTUG00000032602 ahr2 (ENSSTUG00000032386) ENSSTUG00000032363 ENSSTUG00000032334 ahr1b (ENSSTUG00000032193) ENSSTUG00000032145 Oncorhynchus ANCESTRAL SPECIES 43 ENSGT00940000159505.v.a ENSGT00940000157065.y.b ENSGT00390000013113.u ENSGT00940000153577.A ENSGT00510000046499.r.a ENSGT00730000110915.b.c.a ENSGT01050000244864.C.f.a ENSGT01050000244864.D.t.b ENSGT00940000157784.c.d.e ENSGT00940000157784.c.d.f.b ENSGT00940000156556.h.c ENSGT00520000055635.c.a.a.b.e.a ENSGT01000000220200 ENSGT00390000003873.n.a ENSGT00940000157233.c.a ENSGT00950000183208.A.c.a.p #22 ENSGT00390000008033.s.b #28 ENSGT00940000157521.a.b.b ENSGT00940000167103.d ENSGT00940000166136.c ENSGT00390000012561.b.pb.b.c.a.a ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b.d ENSGT00940000166136.d ENSGT00940000167103.c ENSGT00940000157521.a.b.a ENSGT00390000008033.s.a #28 ENSGT00950000183208.A.c.a.o #22 ENSGT00940000157233.c.b ENSGT00390000010372.o.a ENSGT00390000003873.n.b Oncorhynchus_a ANCESTRAL SPECIES 77 ENSGT00940000158589.b.b.d.a.a ENSGT00940000159505.v.a ENSGT00940000157065.y.b ENSGT00390000013113.u ENSGT00940000153577.A ENSGT00510000046499.r.a ENSGT00730000110915.b.c.a ENSGT01050000244864.C.f.a ENSGT01050000244864.D.t.b ENSGT00940000157784.c.d.e.a ENSGT00940000156556.h.c ENSGT00520000055635.c.a.a.b.e.a ENSGT01000000220200 ENSGT00390000003873.n.a ENSGT00940000157233.c.a ENSGT00950000183208.A.c.a.p #22 ENSGT00390000008033.s.b #28 ENSGT00940000157521.a.b.b ENSGT00940000167103.d ENSGT00940000166136.c ENSGT00390000012561.b.pb.b.c.a.a ENSGT00940000160639.b.a.b.b.a.b ENSGT00390000013151.a.a.a.d ENSGT00940000161997.a.j ENSGT00940000160532.g.h ENSGT00940000154486.b.a.a.b.e.a.b.e Chinook salmon MODERN SPECIES 31 TMPRSS3 (ENSOTSG00005033433) PKNOX1 (ENSOTSG00005033432) ITSN1 (ENSOTSG00005033171) cryzl1 (ENSOTSG00005033160) setd4 (ENSOTSG00005033159) cbr1 (ENSOTSG00005033158) bcl9 (ENSOTSG00005033157) gja5b (ENSOTSG00005033155) gja8b (ENSOTSG00005033154) fstl1a (ENSOTSG00005033119) lrrc58a (ENSOTSG00005033118) gsk3ba (ENSOTSG00005029996) ENSOTSG00005029995 TRAPPC10 (ENSOTSG00005029982) ENSOTSG00005029964 zeb2b (ENSOTSG00005029959) #22 ENSOTSG00005029951 #28 ENSOTSG00005029947 ENSOTSG00005029946 ENSOTSG00005029944 bzw1a (ENSOTSG00005029943) ENSOTSG00005024999 ARL4C (ENSOTSG00005024981) sh3bp4a (ENSOTSG00005024975) s100b (ENSOTSG00005024974) ENSOTSG00005024972 ahr2 (ENSOTSG00005024967) nlgn4xa (ENSOTSG00005024424) ENSOTSG00005024423 PRKX (ENSOTSG00005024421) MXRA5 (ENSOTSG00005024419) Coho salmon MODERN SPECIES 25 TMPRSS3 (ENSOKIG00005014428) PKNOX1 (ENSOKIG00005014399) ENSOKIG00005014388 ITSN1 (ENSOKIG00005013142) cryzl1 (ENSOKIG00005012963) setd4 (ENSOKIG00005012951) cbr1 (ENSOKIG00005012945) bcl9 (ENSOKIG00005012919) gja5b (ENSOKIG00005012914) gja8b (ENSOKIG00005012911) fstl1a (ENSOKIG00005012758) ENSOKIG00005012416 ENSOKIG00005012386 TRAPPC10 (ENSOKIG00005012193) ENSOKIG00005012096 zeb2b (ENSOKIG00005012049) #22 ENSOKIG00005011993 #28 ENSOKIG00005011581 ENSOKIG00005011520 ENSOKIG00005011506 bzw1a (ENSOKIG00005011297) AOX1 (ENSOKIG00005005651) ENSOKIG00005005392 ARL4C (ENSOKIG00005005387) sh3bp4a (ENSOKIG00005005374) s100b (ENSOKIG00005005357) ENSOKIG00005005295 ENSOKIG00005005269 ahr2 (ENSOKIG00005005263) ENSOKIG00005005251 ENSOKIG00005049356 Rainbow trout MODERN SPECIES 28 cryzl1 (ENSOMYG00000003093) ENSOMYG00000063705 setd4 (ENSOMYG00000002969) cbr1 (ENSOMYG00000002963) ENSOMYG00000075174 bcl9 (ENSOMYG00000002910) gja5b (ENSOMYG00000002839) gja8b (ENSOMYG00000002837) fstl1a (ENSOMYG00000002771) lrrc58a (ENSOMYG00000002587) GSK3B (ENSOMYG00000002509) ENSOMYG00000051554 ENSOMYG00000057814 ENSOMYG00000002015 ENSOMYG00000001608 ENSOMYG00000001557 #22 ENSOMYG00000001495 #28 ENSOMYG00000001416 ENSOMYG00000001309 ENSOMYG00000074904 ENSOMYG00000045751 bzw1a (ENSOMYG00000045735) ENSOMYG00000074775 ENSOMYG00000043426 ENSOMYG00000052594 ENSOMYG00000043038 sh3bp4a (ENSOMYG00000043018) ENSOMYG00000054897 s100b (ENSOMYG00000043015) ENSOMYG00000042998 ahr2 (ENSOMYG00000042973) Huchen MODERN SPECIES 1038 zeb2b (ENSHHUG00000043573) #22 KYNU (ENSHHUG00000043670) #28 ENSHHUG00000043696 Northern pike MODERN SPECIES 21 chst10 (ENSELUG00000013861) zc3h13 (ENSELUG00000013945) ccnt2b (ENSELUG00000014286) ZRANB3 (ENSELUG00000014333) ENSELUG00000014359 ENSELUG00000014373 R3HDM1 (ENSELUG00000014413) RND3 (ENSELUG00000014441) mmadhca (ENSELUG00000014508) LYPD6 (ENSELUG00000026726) KIF5C (ENSELUG00000014707) MBD5 (ENSELUG00000014723) orc4 (ENSELUG00000014828) ACVR2A (ENSELUG00000014935) ENSELUG00000030788 zeb2b (ENSELUG00000014998) #22 ENSELUG00000029431 KYNU (ENSELUG00000015091) #28 LRP1B (ENSELUG00000015279) ENSELUG00000015484 ENSELUG00000015531 bzw1a (ENSELUG00000015556) AOX1 (ENSELUG00000015666) ARL4C (ENSELUG00000015699) sh3bp4a (ENSELUG00000015726) s100b (ENSELUG00000015744) ENSELUG00000031760 RHCG (ENSELUG00000015813) ENSELUG00000015840 ahr2 (ENSELUG00000015884) ahr1b (ENSELUG00000015980) Acanthomorphata ANCESTRAL SPECIES 112 ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000158714.c ENSGT01100000263502.A.a.a.a.b.a.b ENSGT00940000157728.a.a ENSGT00390000007225 ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a ENSGT01050000244905.A.a Euacanthomorphacea ANCESTRAL SPECIES 26 ENSGT00530000063564.b.b.a ENSGT00530000063564.b.a.a ENSGT00940000158714.c ENSGT01100000263502.A.a.a.a.b.a.b ENSGT00940000157728.a.a ENSGT00390000007225 ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a ENSGT01050000244905.A.a ENSGT00940000167649 Percomorphaceae ANCESTRAL SPECIES 22 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089.e.a ENSGT00940000165423.a.b ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a ENSGT01050000244905.A.a Percomorphaceae_B ANCESTRAL SPECIES 22 ENSGT00940000176171 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Percomorphaceae_C ANCESTRAL SPECIES 23 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b Eupercaria ANCESTRAL SPECIES 23 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b Tetraodontidae ANCESTRAL SPECIES 26 ENSGT00940000167649 ENSGT01050000244905.A.a ENSGT00390000010463.a.b.c.a ENSGT00390000006330.a.a.b ENSGT00530000063599.B ENSGT00940000155311.B ENSGT00940000154486.b.b.a.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000177277 ENSGT00390000013151.a.a.a ENSGT00940000160639.a ENSGT00940000155773.a ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT01030000235131 ENSGT00950000183028.a.a.a.g.b ENSGT00940000161625.m ENSGT00940000165423.a.b ENSGT00940000156089.e.a ENSGT00500000044939 ENSGT00390000005159.j ENSGT00940000156444.c ENSGT00940000155861.C.e Fugu MODERN SPECIES 20 glsa (ENSTRUG00000000086) nab1a (ENSTRUG00000000082) mfsd6a (ENSTRUG00000000080) ENSTRUG00000021239 ahr1b (ENSTRUG00000027973) ENSTRUG00000000070 ENSTRUG00000023591 sh3bp4a (ENSTRUG00000002780) ENSTRUG00000003183 ENSTRUG00000030551 MBD5 (ENSTRUG00000003915) orc4 (ENSTRUG00000004031) ACVR2A (ENSTRUG00000004589) ENSTRUG00000020772 ENSTRUG00000030280 zeb2b (ENSTRUG00000005095) #22 KYNU (ENSTRUG00000005436) #28 ENSTRUG00000026999 ENSTRUG00000027028 ENSTRUG00000005875 PLCXD1 (ENSTRUG00000008571) bzw1a (ENSTRUG00000005902) AOX1 (ENSTRUG00000006144) ENSTRUG00000019616 ENSTRUG00000008468 ENSTRUG00000029019 abi2b (ENSTRUG00000009423) cyp20a1 (ENSTRUG00000009561) tmem237b (ENSTRUG00000009812) MPP4 (ENSTRUG00000009863) ALS2 (ENSTRUG00000009974) Tetraodon MODERN SPECIES 18 ENSTNIG00000000517 MAP3K2 (ENSTNIG00000017156) sumo1 (ENSTNIG00000017157) SHROOM2 (ENSTNIG00000017158) aatf (ENSTNIG00000017159) mstna (ENSTNIG00000017160) stat1a (ENSTNIG00000017161) glsa (ENSTNIG00000017162) nab1a (ENSTNIG00000017163) mfsd6a (ENSTNIG00000017164) ENSTNIG00000000189 ENSTNIG00000017165 ACVR2A (ENSTNIG00000017166) hoxc10a (ENSTNIG00000015049) hoxc10a (ENSTNIG00000017167) zeb2b (ENSTNIG00000017169) #22 ENSTNIG00000017170 ENSTNIG00000017171 #28 ENSTNIG00000000092 ENSTNIG00000017172 ENSTNIG00000000131 bzw1a (ENSTNIG00000017173) AOX1 (ENSTNIG00000017174) fhl2b (ENSTNIG00000017175) ENSTNIG00000017176 ENSTNIG00000017177 abi2b (ENSTNIG00000005932) cyp20a1 (ENSTNIG00000000941) ENSTNIG00000017179 cyp20a1 (ENSTNIG00000017178) ENSTNIG00000000361 Eupecaria_A ANCESTRAL SPECIES 23 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b Ballan wrasse MODERN SPECIES 65 MPP4 (ENSLBEG00000005345) ALS2 (ENSLBEG00000005235) CHRNA2 (ENSLBEG00000005188) zgc:113142 (ENSLBEG00000005165) inpp4ab (ENSLBEG00000005082) ENSLBEG00000005042 ENSLBEG00000005023 ENSLBEG00000005006 ENSLBEG00000004915 KIF5C (ENSLBEG00000004832) ENSLBEG00000004796 MBD5 (ENSLBEG00000004755) ACVR2A (ENSLBEG00000004722) orc4 (ENSLBEG00000004692) ENSLBEG00000004669 zeb2b (ENSLBEG00000004635) #22 ENSLBEG00000004585 Eupecaria_B ANCESTRAL SPECIES 23 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Eupecaria_C ANCESTRAL SPECIES 30 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 62 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b Large yellow croaker MODERN SPECIES 486 ALS2 (ENSLCRG00005016821) MPP4 (ENSLCRG00005016829) tmem237b (ENSLCRG00005016841) cyp20a1 (ENSLCRG00005016846) abi2b (ENSLCRG00005016857) ENSLCRG00005017103 ENSLCRG00005017108 zgc:112023 (ENSLCRG00005017112) ENSLCRG00005017113 si:dkey-276j7.1 (ENSLCRG00005017114) ENSLCRG00005017145 KIF5C (ENSLCRG00005019928) MBD5 (ENSLCRG00005020022) orc4 (ENSLCRG00005020026) ACVR2A (ENSLCRG00005020035) zeb2b (ENSLCRG00005020091) #22 ENSLCRG00005020092 KYNU (ENSLCRG00005020095) #28 ENSLCRG00005020117 bzw1a (ENSLCRG00005020120) ENSLCRG00005020126 AOX1 (ENSLCRG00005020138) ENSLCRG00005020635 ENSLCRG00005020643 pwp2h (ENSLCRG00005020649) eed (ENSLCRG00005020653) ATP7B (ENSLCRG00005020672) ENSLCRG00005021202 ENSLCRG00005021205 ENSLCRG00005021230 gpd2 (ENSLCRG00005021231) European seabass MODERN SPECIES 15 ALS2 (ENSDLAG00005003900) ENSDLAG00005004272 MPP4 (ENSDLAG00005004698) tmem237b (ENSDLAG00005004792) cyp20a1 (ENSDLAG00005004839) ENSDLAG00005005020 ENSDLAG00005005092 ENSDLAG00005005117 ENSDLAG00005005133 ENSDLAG00005005138 ENSDLAG00005005185 KIF5C (ENSDLAG00005028840) MBD5 (ENSDLAG00005007803) ORC4 (ENSDLAG00005007813) ACVR2A (ENSDLAG00005034750) ZEB2 (ENSDLAG00005008176) #22 ENSDLAG00005008220 ENSDLAG00005008233 #28 ENSDLAG00005028082 ENSDLAG00005008382 ENSDLAG00005034195 ENSDLAG00005009168 ENSDLAG00005025101 ENSDLAG00005025769 ENSDLAG00005025771 ENSDLAG00005025783 ENSDLAG00005025813 ENSDLAG00005025884 ENSDLAG00005025985 ENSDLAG00005025989 ENSDLAG00005025994 Gilthead seabream MODERN SPECIES 16 ENSSAUG00010008970 ENSSAUG00010009365 ENSSAUG00010009368 zgc:65895 (ENSSAUG00010009367) ENSSAUG00010009370 ENSSAUG00010009378 ENSSAUG00010009384 ENSSAUG00010009397 ENSSAUG00010009401 ENSSAUG00010009403 ENSSAUG00010009417 KIF5C (ENSSAUG00010012040) MBD5 (ENSSAUG00010016533) orc4 (ENSSAUG00010016547) ACVR2A (ENSSAUG00010016790) zeb2b (ENSSAUG00010017032) #22 ENSSAUG00010017040 ENSSAUG00010017043 ENSSAUG00010017046 ENSSAUG00010017049 ENSSAUG00010017058 ENSSAUG00010017068 arl4cb (ENSSAUG00010017069) sh3bp4a (ENSSAUG00010017071) s100b (ENSSAUG00010017074) ENSSAUG00010017077 ENSSAUG00010017085 ahr1b (ENSSAUG00010017109) ENSSAUG00010017118 mfsd6a (ENSSAUG00010017120) nab1a (ENSSAUG00010017125) Perciformes ANCESTRAL SPECIES 27 ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b Cottioidei ANCESTRAL SPECIES 48 ENSGT00940000155861.C.e ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00390000008033 #28 Stickleback MODERN SPECIES zeb2b (ENSGACG00000015660) #22 ENSGACG00000015659 ENSGACG00000015657 ENSGACG00000015656 bzw1a (ENSGACG00000015646) AOX1 (ENSGACG00000015642) KYNU (ENSGACG00000015629) #28 ENSGACG00000015628 s100b (ENSGACG00000015622) sh3bp4a (ENSGACG00000015619) ENSGACG00000015617 ahr1b (ENSGACG00000015615) mfsd6a (ENSGACG00000015610) nab1a (ENSGACG00000015609) glsa (ENSGACG00000015599) stat1a (ENSGACG00000015589) Lumpfish MODERN SPECIES 11 ENSCLMG00005011044 NXPE3 (ENSCLMG00005011043) ENSCLMG00005011041 NXPE3 (ENSCLMG00005011040) ENSCLMG00005011039 ENSCLMG00005011036 zgc:112023 (ENSCLMG00005011034) ENSCLMG00005011027 ENSCLMG00005011025 ENSCLMG00005011024 KIF5C (ENSCLMG00005011023) MBD5 (ENSCLMG00005011019) orc4 (ENSCLMG00005010871) ACVR2A (ENSCLMG00005010757) ENSCLMG00005010755 zeb2b (ENSCLMG00005010704) #22 ENSCLMG00005010702 ENSCLMG00005010699 bzw1a (ENSCLMG00005010696) ENSCLMG00005010684 AOX1 (ENSCLMG00005010586) KYNU (ENSCLMG00005010583) #28 ephx2 (ENSCLMG00005010466) plaat1l (ENSCLMG00005010459) ENSCLMG00005010457 ENSCLMG00005010456 dusp27 (ENSCLMG00005010417) ENSCLMG00005010415 cybb (ENSCLMG00005010347) dynlt3 (ENSCLMG00005010346) TDP2 (ENSCLMG00005010345) Perciformes_a ANCESTRAL SPECIES 29 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b Pike perch MODERN SPECIES 141 ENSSLUG00000025310 ENSSLUG00000025296 ENSSLUG00000025287 ENSSLUG00000025284 si:dkey-276j7.1 (ENSSLUG00000025280) ENSSLUG00000025219 KIF5C (ENSSLUG00000025159) MBD5 (ENSSLUG00000025136) orc4 (ENSSLUG00000025128) ACVR2A (ENSSLUG00000025094) zeb2b (ENSSLUG00000025080) #22 KYNU (ENSSLUG00000025070) #28 ENSSLUG00000025063 ENSSLUG00000025059 ENSSLUG00000025055 bzw1a (ENSSLUG00000025021) AOX1 (ENSSLUG00000010458) anos1a (ENSSLUG00000009499) STS (ENSSLUG00000009477) ENSSLUG00000009470 ENSSLUG00000009467 pudp (ENSSLUG00000009463) Channel bull blenny MODERN SPECIES 11 abi2b (ENSCGOG00000020352) ENSCGOG00000020468 ENSCGOG00000020469 zgc:112023 (ENSCGOG00000020471) FHL2 (ENSCGOG00000020473) ENSCGOG00000020475 ENSCGOG00000020514 KIF5C (ENSCGOG00000021510) ENSCGOG00000021684 ENSCGOG00000021686 ENSCGOG00000021687 MBD5 (ENSCGOG00000002636) orc4 (ENSCGOG00000002670) orc4 (ENSCGOG00000002776) ACVR2A (ENSCGOG00000002801) zeb2b (ENSCGOG00000002864) #22 KYNU (ENSCGOG00000003107) #28 ENSCGOG00000003128 bzw1a (ENSCGOG00000003166) ENSCGOG00000004010 AOX1 (ENSCGOG00000004031) ENSCGOG00000005824 ENSCGOG00000005840 sh3bp4a (ENSCGOG00000005842) s100b (ENSCGOG00000005909) ENSCGOG00000005915 ENSCGOG00000005921 ahr1b (ENSCGOG00000005961) ENSCGOG00000006210 mfsd6a (ENSCGOG00000006212) nab1a (ENSCGOG00000006217) Percomorphaceae_D ANCESTRAL SPECIES 23 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000160835.k ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b Anabantaria ANCESTRAL SPECIES 32 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Anabantoidei ANCESTRAL SPECIES 28 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000167649 ENSGT01050000244905.A.a ENSGT00390000010463.a.b.c.a ENSGT00390000006330.a.a.b ENSGT00530000063599.B ENSGT00940000155311.B Climbing perch MODERN SPECIES 11 tmem237b (ENSATEG00000013987) cyp20a1 (ENSATEG00000013941) abi2b (ENSATEG00000013899) ENSATEG00000026816 ENSATEG00000013793 ENSATEG00000013736 ENSATEG00000013651 ENSATEG00000013592 ENSATEG00000013576 ENSATEG00000013561 ENSATEG00000013509 KIF5C (ENSATEG00000013424) MBD5 (ENSATEG00000013403) ORC4 (ENSATEG00000013353) ACVR2A (ENSATEG00000013308) ZEB2 (ENSATEG00000013248) #22 ENSATEG00000013173 #28 ENSATEG00000029211 ENSATEG00000013105 bzw1a (ENSATEG00000013087) ENSATEG00000013045 ENSATEG00000013007 sh3bp4a (ENSATEG00000012985) s100b (ENSATEG00000012971) ENSATEG00000012959 mstna (ENSATEG00000012946) stat1a (ENSATEG00000012909) glsa (ENSATEG00000012895) nab1a (ENSATEG00000012852) ENSATEG00000029503 mfsd6a (ENSATEG00000012822) Siamese fighting fish MODERN SPECIES 10 dnpep (ENSBSLG00000002951) PTPRN (ENSBSLG00000003064) ENSBSLG00000003076 bin1b (ENSBSLG00000003108) ihhb (ENSBSLG00000003648) nhej1 (ENSBSLG00000003692) ENSBSLG00000003716 ENSBSLG00000003742 ENSBSLG00000003756 si:dkey-276j7.1 (ENSBSLG00000003778) ENSBSLG00000003858 KIF5C (ENSBSLG00000004215) MBD5 (ENSBSLG00000004621) orc4 (ENSBSLG00000004625) ACVR2A (ENSBSLG00000004863) zeb2b (ENSBSLG00000005505) #22 ENSBSLG00000005554 KYNU (ENSBSLG00000005626) #28 ENSBSLG00000005795 ENSBSLG00000005865 bzw1a (ENSBSLG00000005879) AOX1 (ENSBSLG00000006075) ENSBSLG00000010522 sh3bp4a (ENSBSLG00000010523) s100b (ENSBSLG00000010525) mstna (ENSBSLG00000010533) stat1a (ENSBSLG00000010548) glsa (ENSBSLG00000011120) nab1a (ENSBSLG00000011389) mfsd6a (ENSBSLG00000011394) ENSBSLG00000011399 Zig-zag eel MODERN SPECIES 11 ENSMAMG00000022393 ENSMAMG00000022391 ENSMAMG00000022394 abi2b (ENSMAMG00000022395) cyp20a1 (ENSMAMG00000022396) tmem237b (ENSMAMG00000022398) ENSMAMG00000022400 ALS2 (ENSMAMG00000022402) ENSMAMG00000022411 ENSMAMG00000022423 ENSMAMG00000022416 KIF5C (ENSMAMG00000022432) MBD5 (ENSMAMG00000022463) ORC4 (ENSMAMG00000022465) ACVR2A (ENSMAMG00000022472) ZEB2 (ENSMAMG00000022475) #22 ENSMAMG00000022477 ENSMAMG00000022479 ENSMAMG00000022484 bzw1a (ENSMAMG00000022490) ENSMAMG00000022504 ENSMAMG00000022508 ENSMAMG00000022510 #28 s100b (ENSMAMG00000022511) ENSMAMG00000022513 ENSMAMG00000022514 ahr1b (ENSMAMG00000022515) ENSMAMG00000022516 mfsd6a (ENSMAMG00000022518) nab1a (ENSMAMG00000022520) glsa (ENSMAMG00000022523) Carangaria ANCESTRAL SPECIES 23 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000160835.k ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b Carangaria_A ANCESTRAL SPECIES 38 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000160835.k ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Seriola ANCESTRAL SPECIES 47 ENSGT00940000155861.C.e ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000160835.k ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00530000063484.b.b.d.b ENSGT00940000154342.C ENSGT01030000234555.a.b.f.b ENSGT00390000016929 Greater amberjack MODERN SPECIES 7 cyp20a1 (ENSSDUG00000012751) ENSSDUG00000012774 abi2b (ENSSDUG00000012792) ENSSDUG00000012818 ENSSDUG00000012835 ENSSDUG00000012846 ENSSDUG00000012859 ENSSDUG00000012903 ENSSDUG00000012914 ENSSDUG00000012932 ENSSDUG00000012979 KIF5C (ENSSDUG00000013005) MBD5 (ENSSDUG00000013099) orc4 (ENSSDUG00000013148) ACVR2A (ENSSDUG00000013241) zeb2b (ENSSDUG00000013274) #22 KYNU (ENSSDUG00000013315) #28 ENSSDUG00000013341 ENSSDUG00000013357 ENSSDUG00000013396 bzw1a (ENSSDUG00000013408) aox5 (ENSSDUG00000013452) AOX1 (ENSSDUG00000013779) sh3bp4a (ENSSDUG00000015477) s100b (ENSSDUG00000015497) ENSSDUG00000015503 ahr1b (ENSSDUG00000015515) tmem47 (ENSSDUG00000015528) DMD (ENSSDUG00000015736) ENSSDUG00000018370 gtf3c3 (ENSSDUG00000018401) Yellowtail amberjack MODERN SPECIES 3147 ENSSLDG00000009607 ENSSLDG00000009626 ENSSLDG00000009703 ENSSLDG00000009979 abi2b (ENSSLDG00000010004) cyp20a1 (ENSSLDG00000010047) tmem237b (ENSSLDG00000010122) ENSSLDG00000010157 ALS2 (ENSSLDG00000010212) CHRNA2 (ENSSLDG00000010291) zgc:113142 (ENSSLDG00000010348) inpp4ab (ENSSLDG00000010371) MBD5 (ENSSLDG00000010440) orc4 (ENSSLDG00000010515) ACVR2A (ENSSLDG00000010622) zeb2b (ENSSLDG00000010668) #22 KYNU (ENSSLDG00000010706) #28 ENSSLDG00000010753 ENSSLDG00000010788 bzw1a (ENSSLDG00000010836) AOX1 (ENSSLDG00000011123) ENSSLDG00000012103 ENSSLDG00000012138 sh3bp4a (ENSSLDG00000012152) s100b (ENSSLDG00000012175) ENSSLDG00000012183 ahr1b (ENSSLDG00000012205) tmem47 (ENSSLDG00000012245) ENSSLDG00000012286 dmd (ENSSLDG00000012633) ENSSLDG00000013385 Barramundi perch MODERN SPECIES 115 cyp20a1 (ENSLCAG00010012080) abi2b (ENSLCAG00010012124) ENSLCAG00010012155 ENSLCAG00010012176 ENSLCAG00010012182 ENSLCAG00010012187 zgc:112023 (ENSLCAG00010012190) ENSLCAG00010012199 si:dkey-276j7.1 (ENSLCAG00010012224) ENSLCAG00010012428 ENSLCAG00010013139 KIF5C (ENSLCAG00010013218) MBD5 (ENSLCAG00010013634) orc4 (ENSLCAG00010013653) ACVR2A (ENSLCAG00010013704) zeb2b (ENSLCAG00010013729) #22 ENSLCAG00010013734 ENSLCAG00010013749 glsa (ENSLCAG00010013844) nab1a (ENSLCAG00010013993) mfsd6a (ENSLCAG00010013995) ENSLCAG00010013996 ahr1b (ENSLCAG00010013999) ENSLCAG00010014006 s100b (ENSLCAG00010014012) sh3bp4a (ENSLCAG00010014015) ENSLCAG00010014017 AOX1 (ENSLCAG00010014794) bzw1a (ENSLCAG00010019339) ENSLCAG00010019359 ENSLCAG00010019360 Pleuronectoidei ANCESTRAL SPECIES 47 ENSGT00940000155861.C.e ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Turbot MODERN SPECIES ENSSMAG00000001269 ALS2 (ENSSMAG00000001294) ENSSMAG00000001424 tmem237b (ENSSMAG00000001881) cyp20a1 (ENSSMAG00000001937) abi2b (ENSSMAG00000001987) ENSSMAG00000033782 ENSSMAG00000002095 ENSSMAG00000002121 ENSSMAG00000024252 ENSSMAG00000002383 KIF5C (ENSSMAG00000002413) MBD5 (ENSSMAG00000002494) ORC4 (ENSSMAG00000002536) ACVR2A (ENSSMAG00000002580) ZEB2 (ENSSMAG00000002657) #22 ENSSMAG00000036749 ENSSMAG00000013344 #28 ENSSMAG00000013302 ENSSMAG00000013288 bzw1a (ENSSMAG00000013262) aox5 (ENSSMAG00000013142) ENSSMAG00000013102 ENSSMAG00000013072 sh3bp4a (ENSSMAG00000013057) s100b (ENSSMAG00000029219) ENSSMAG00000013034 ahr1b (ENSSMAG00000013002) ENSSMAG00000029041 mfsd6a (ENSSMAG00000012979) nab1a (ENSSMAG00000012947) Tongue sole MODERN SPECIES 5 MPP4 (ENSCSEG00000006563) tmem237b (ENSCSEG00000006585) cyp20a1 (ENSCSEG00000006600) abi2b (ENSCSEG00000006631) ENSCSEG00000006678 ENSCSEG00000006741 ENSCSEG00000006768 FHL2 (ENSCSEG00000006775) ENSCSEG00000006780 ENSCSEG00000006793 ENSCSEG00000006806 KIF5C (ENSCSEG00000006817) MBD5 (ENSCSEG00000006850) orc4 (ENSCSEG00000006874) ACVR2A (ENSCSEG00000006914) zeb2b (ENSCSEG00000006933) #22 ENSCSEG00000006940 ENSCSEG00000006960 ENSCSEG00000006979 ENSCSEG00000006987 ENSCSEG00000006993 HAPLN1 (ENSCSEG00000007007) ENSCSEG00000007035 zcchc9 (ENSCSEG00000007145) ENSCSEG00000007159 slc12a2 (ENSCSEG00000007172) GAL3ST3 (ENSCSEG00000007242) ENSCSEG00000007245 ENSCSEG00000007256 MAPKAP1 (ENSCSEG00000007263) ENSCSEG00000007320 Ovalentaria ANCESTRAL SPECIES 23 ENSGT00940000176171 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Ovalentaria_B ANCESTRAL SPECIES 22 ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00530000063599.B.i.a ENSGT00390000006330.a.a.b Pomacentridae ANCESTRAL SPECIES 187 ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263476.E.b.a.a.b.a.b.c.a ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00940000178558 ENSGT00940000177855 Pomacentridae_A ANCESTRAL SPECIES 139 ENSGT00940000156444.c ENSGT00940000155861.C.e ENSGT00940000158299.b ENSGT00940000164908 ENSGT00940000157360.c ENSGT00940000165423.a.b ENSGT00610000086518.b.a ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00940000178558 ENSGT00940000177855 Amphiprion ANCESTRAL SPECIES 166 ENSGT00940000155861.C.e ENSGT00940000158299.b ENSGT00940000164908 ENSGT00940000157360.c ENSGT00940000165423.a.b ENSGT00610000086518.b.a ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT01090000262788 ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00940000178558 ENSGT00940000177855 Clown anemonefish MODERN SPECIES 3332 ENSAOCG00000009035 zeb2b (ENSAOCG00000009065) #22 ENSAOCG00000009078 Orange clownfish MODERN SPECIES 16 CHRNA2 (ENSAPEG00000019366) zgc:113142 (ENSAPEG00000019392) inpp4ab (ENSAPEG00000019412) ENSAPEG00000019552 ENSAPEG00000019608 ENSAPEG00000019745 ENSAPEG00000019789 ENSAPEG00000019836 si:dkey-276j7.1 (ENSAPEG00000020173) ENSAPEG00000020204 KIF5C (ENSAPEG00000020317) ENSAPEG00000020851 MBD5 (ENSAPEG00000020872) orc4 (ENSAPEG00000020943) ACVR2A (ENSAPEG00000020976) zeb2b (ENSAPEG00000021041) #22 ENSAPEG00000021071 ENSAPEG00000021092 caskb (ENSAPEG00000021118) abcc4 (ENSAPEG00000021170) caskb (ENSAPEG00000021331) GPR34 (ENSAPEG00000003013) cenpl (ENSAPEG00000003021) FUNDC1 (ENSAPEG00000003073) kdm6al (ENSAPEG00000003112) ENSAPEG00000003263 ADAMTS5 (ENSAPEG00000003387) ADAMTS1 (ENSAPEG00000003424) cyyr1 (ENSAPEG00000003448) APP (ENSAPEG00000003479) atp5pf (ENSAPEG00000003584) Spiny chromis MODERN SPECIES 60 MBD5 (ENSAPOG00000000708) orc4 (ENSAPOG00000016434) ACVR2A (ENSAPOG00000016358) zeb2b (ENSAPOG00000016286) #22 ENSAPOG00000016223 ENSAPOG00000016219 ENSAPOG00000016205 ENSAPOG00000016196 sgms2b (ENSAPOG00000016147) ENSAPOG00000016137 ENSAPOG00000016132 ENSAPOG00000016125 ENSAPOG00000016099 ENSAPOG00000016085 ENSAPOG00000016073 cyp17a2 (ENSAPOG00000016068) ENSAPOG00000016013 prelid1b (ENSAPOG00000016006) ENSAPOG00000015973 Bicolor damselfish MODERN SPECIES 411 zeb2b (ENSSPAG00000016513) #22 ENSSPAG00000016552 ENSSPAG00000016568 Cichlidae ANCESTRAL SPECIES 27 ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.i.a ENSGT00390000006330.a.a.b Pseudocrenilabrinae ANCESTRAL SPECIES 10 ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089.e.a ENSGT00610000086518.b.a.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000160835 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.i.a ENSGT00390000006330.a.a.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 16 ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000176171 ENSGT00940000156089.e.a ENSGT00610000086518.b.a.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.i.a ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Haplochromini ANCESTRAL SPECIES 38 ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a.a.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b.q ENSGT00390000016542 ENSGT00940000157233.c ENSGT00940000177855 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.i.a ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Haplochromini_A ANCESTRAL SPECIES 42 ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a.a.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000154395.a.a.b.b.g.b.m.a ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b.q ENSGT00390000016542 ENSGT00940000157233.c ENSGT00940000177855 ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.i.a ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a P. nyererei MODERN SPECIES 380 ENSPNYG00000022444 ENSPNYG00000022424 ENSPNYG00000022405 ENSPNYG00000022392 ENSPNYG00000022379 ENSPNYG00000022374 si:dkey-276j7.1 (ENSPNYG00000022362) ENSPNYG00000022347 KIF5C (ENSPNYG00000022326) ENSPNYG00000022317 orc4 (ENSPNYG00000022306) ACVR2A (ENSPNYG00000022291) ENSPNYG00000022254 ENSPNYG00000022247 ENSPNYG00000022234 zeb2b (ENSPNYG00000022218) #22 KYNU (ENSPNYG00000022184) #28 ENSPNYG00000022175 ENSPNYG00000022153 ENSPNYG00000022140 bzw1a (ENSPNYG00000022122) AOX1 (ENSPNYG00000021820) ENSPNYG00000021646 ENSPNYG00000021637 sh3bp4a (ENSPNYG00000021626) s100b (ENSPNYG00000021618) ENSPNYG00000021607 ENSPNYG00000021546 ENSPNYG00000021443 ENSPNYG00000021394 mfsd6a (ENSPNYG00000021356) Haplochromini_B ANCESTRAL SPECIES 48 ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a.a.a ENSGT00940000165423.a.b ENSGT01100000263513.a.b ENSGT00940000154395.a.a.b.b.g.b.m.a ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b.q ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.i.a ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Zebra mbuna MODERN SPECIES 1105 mfsd6a (ENSMZEG00005015608) ENSMZEG00005015623 ahr1b (ENSMZEG00005015628) ENSMZEG00005015646 ENSMZEG00005015665 ENSMZEG00005015678 s100b (ENSMZEG00005015684) sh3bp4a (ENSMZEG00005015690) ENSMZEG00005015698 AOX1 (ENSMZEG00005015711) bzw1a (ENSMZEG00005015758) ENSMZEG00005015788 ENSMZEG00005015796 ENSMZEG00005015807 KYNU (ENSMZEG00005015818) #28 zeb2b (ENSMZEG00005015857) #22 ENSMZEG00005015865 #23 ACVR2A (ENSMZEG00005015870) orc4 (ENSMZEG00005015887) MBD5 (ENSMZEG00005015907) KIF5C (ENSMZEG00005015999) ENSMZEG00005017356 si:dkey-276j7.1 (ENSMZEG00005017363) ENSMZEG00005017369 ENSMZEG00005017371 ENSMZEG00005017375 ENSMZEG00005017377 ENSMZEG00005017382 ENSMZEG00005017391 ENSMZEG00005017403 ENSMZEG00005017418 Eastern happy MODERN SPECIES 14 ENSACLG00000015448 ENSACLG00000015398 ENSACLG00000015120 ENSACLG00000015074 ENSACLG00000015053 ENSACLG00000015039 ENSACLG00000015007 si:dkey-276j7.1 (ENSACLG00000014993) ENSACLG00000014949 KIF5C (ENSACLG00000014904) MBD5 (ENSACLG00000014821) orc4 (ENSACLG00000014765) ACVR2A (ENSACLG00000014722) ENSACLG00000014633 ENSACLG00000014619 zeb2b (ENSACLG00000014590) #22 KYNU (ENSACLG00000014420) #28 ENSACLG00000014354 ENSACLG00000014340 bzw1a (ENSACLG00000014272) AOX1 (ENSACLG00000014214) ENSACLG00000014159 sh3bp4a (ENSACLG00000014087) s100b (ENSACLG00000014052) ENSACLG00000014025 ENSACLG00000013968 ahr1b (ENSACLG00000013927) ENSACLG00000013870 ENSACLG00000013861 mfsd6a (ENSACLG00000013804) nab1a (ENSACLG00000013744) Burton s mouthbrooder MODERN SPECIES 302 ENSHBUG00000008913 ENSHBUG00000000222 ENSHBUG00000008954 si:dkey-276j7.1 (ENSHBUG00000000225) ENSHBUG00000008986 KIF5C (ENSHBUG00000009110) MBD5 (ENSHBUG00000009128) orc4 (ENSHBUG00000009159) ACVR2A (ENSHBUG00000009246) ENSHBUG00000009275 zeb2b (ENSHBUG00000009312) #22 KYNU (ENSHBUG00000009358) #28 ENSHBUG00000009397 ENSHBUG00000009415 bzw1a (ENSHBUG00000009482) AOX1 (ENSHBUG00000009527) ENSHBUG00000009561 sh3bp4a (ENSHBUG00000009590) s100b (ENSHBUG00000009598) ENSHBUG00000009612 ENSHBUG00000000246 ENSHBUG00000000248 ENSHBUG00000009653 mfsd6a (ENSHBUG00000009699) nab1a (ENSHBUG00000009745) glsa (ENSHBUG00000009819) Lyretail cichlid MODERN SPECIES 315 ENSNBRG00000014302 ENSNBRG00000014333 ENSNBRG00000014498 ENSNBRG00000014506 ENSNBRG00000014521 ENSNBRG00000014531 ENSNBRG00000014545 ENSNBRG00000014556 ENSNBRG00000014599 ENSNBRG00000014767 KIF5C (ENSNBRG00000014799) ENSNBRG00000014843 MBD5 (ENSNBRG00000014857) orc4 (ENSNBRG00000014881) ACVR2A (ENSNBRG00000014918) zeb2b (ENSNBRG00000014957) #22 ENSNBRG00000014980 KYNU (ENSNBRG00000014995) #28 ENSNBRG00000015042 ENSNBRG00000015054 ENSNBRG00000015091 bzw1a (ENSNBRG00000015102) AOX1 (ENSNBRG00000015139) ENSNBRG00000015182 sh3bp4a (ENSNBRG00000015226) s100b (ENSNBRG00000015237) ENSNBRG00000015244 ENSNBRG00000015256 ahr1b (ENSNBRG00000015283) ENSNBRG00000015423 mfsd6a (ENSNBRG00000015467) Nile tilapia MODERN SPECIES 14 ENSONIG00000012316 ENSONIG00000034786 ENSONIG00000012315 ENSONIG00000027291 ENSONIG00000031669 ENSONIG00000028870 ENSONIG00000012312 ENSONIG00000012311 ENSONIG00000014220 si:dkey-276j7.1 (ENSONIG00000043039) ENSONIG00000012299 KIF5C (ENSONIG00000012293) orc4 (ENSONIG00000012282) MBD5 (ENSONIG00000012287) ACVR2A (ENSONIG00000012275) zeb2b (ENSONIG00000012271) #22 ENSONIG00000027312 KYNU (ENSONIG00000012265) #28 ENSONIG00000041655 ENSONIG00000012262 ENSONIG00000034740 ENSONIG00000012261 bzw1a (ENSONIG00000042050) AOX1 (ENSONIG00000012222) ENSONIG00000027545 ENSONIG00000021039 sh3bp4a (ENSONIG00000012221) s100b (ENSONIG00000012218) ENSONIG00000039895 ENSONIG00000012216 ahr1b (ENSONIG00000041277) Midas cichlid MODERN SPECIES 371 ENSACIG00000010616 ENSACIG00000010655 ENSACIG00000010698 ENSACIG00000010716 ENSACIG00000010730 KIF5C (ENSACIG00000010772) ENSACIG00000010821 MBD5 (ENSACIG00000010834) orc4 (ENSACIG00000010856) ACVR2A (ENSACIG00000010889) zeb2b (ENSACIG00000010911) #22 ENSACIG00000010941 Atherinomorphae ANCESTRAL SPECIES 24 ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT01030000235131 ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000177277 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Cyprinodontiformes ANCESTRAL SPECIES 26 ENSGT00940000156444.c ENSGT00390000005159.j ENSGT00500000044939 ENSGT00940000156089.e.a ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a ENSGT01050000244905.A.a Aplocheiloidei ANCESTRAL SPECIES 226 ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b Mangrove rivulus MODERN SPECIES 160 KIF5C (ENSKMAG00000004300) MBD5 (ENSKMAG00000004289) orc4 (ENSKMAG00000004218) ACVR2A (ENSKMAG00000004157) zeb2b (ENSKMAG00000004104) #22 KYNU (ENSKMAG00000004049) #28 ENSKMAG00000004037 ENSKMAG00000003990 ENSKMAG00000003975 bzw1a (ENSKMAG00000003931) Turquoise killifish MODERN SPECIES 1619 ache (ENSNFUG00015012736) znf16l (ENSNFUG00015012724) ENSNFUG00015012691 NR4A2 (ENSNFUG00015012524) gpd2 (ENSNFUG00015012357) ENSNFUG00015012335 ENSNFUG00015012237 eed (ENSNFUG00015012208) ENSNFUG00015012170 ENSNFUG00015011470 FAM171B (ENSNFUG00015011440) MBD5 (ENSNFUG00015011296) ACVR2A (ENSNFUG00015011205) ENSNFUG00015011167 ENSNFUG00015011163 zeb2b (ENSNFUG00015011080) #22 ENSNFUG00015011047 #23 ENSNFUG00015011037 AOX1 (ENSNFUG00015008831) bzw1a (ENSNFUG00015008762) ENSNFUG00015008757 ENSNFUG00015008729 ENSNFUG00015008412 ENSNFUG00015008373 SH3BP4A (ENSNFUG00015008370) ARL4C (ENSNFUG00015008367) s100b (ENSNFUG00015008365) OLA.329 (ENSNFUG00015008356) ENSNFUG00015008347 mfsd6a (ENSNFUG00015008344) ENSNFUG00015008341 Cyprinodontoidei ANCESTRAL SPECIES 67 ENSGT00610000086518.b.a ENSGT00940000165423.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000168817 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a NAME_4 ANCESTRAL SPECIES 184 ENSGT00940000165423.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000168817 ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Mummichog MODERN SPECIES 2437 zeb2b (ENSFHEG00000020874) #22 KYNU (ENSFHEG00000020917) #28 Sheepshead minnow MODERN SPECIES 175 ENSCVAG00000022558 ENSCVAG00000022584 ENSCVAG00000022586 ENSCVAG00000022593 ENSCVAG00000022605 KIF5C (ENSCVAG00000022674) MBD5 (ENSCVAG00000022692) orc4 (ENSCVAG00000022702) ACVR2A (ENSCVAG00000022775) ENSCVAG00000022787 zeb2b (ENSCVAG00000022820) #22 KYNU (ENSCVAG00000022823) #28 ENSCVAG00000022843 ENSCVAG00000022855 bzw1a (ENSCVAG00000022879) AOX1 (ENSCVAG00000023083) ENSCVAG00000023139 sh3bp4a (ENSCVAG00000023146) s100b (ENSCVAG00000023198) Poeciliinae ANCESTRAL SPECIES 23 ENSGT00940000155318.b.b ENSGT00390000010543.v ENSGT01030000234635.a.b.a.b.a ENSGT00610000086518.b.a.h.a ENSGT00610000086518.b.a.h.b ENSGT00940000165423.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000168817.l.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Poecilia DUPLICATION Poecilia ANCESTRAL SPECIES 30 ENSGT00390000010543.v ENSGT00940000155318.b.b ENSGT01030000234635.a.b.a.b.a ENSGT00610000086518.b.a.h.a ENSGT00610000086518.b.a.h.b ENSGT00940000165423.a.b ENSGT00940000161625.m ENSGT00950000183028.a.a.a.g.b ENSGT00390000014376.c.b ENSGT00940000178373 ENSGT00940000155773.a ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a.q #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00940000160639.a ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000168817.l.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a NAME_6 ANCESTRAL SPECIES 151 ENSGT00940000155992.c.a ENSGT00530000063273.b.a.a ENSGT00720000108822 ENSGT00940000153969.b ENSGT00940000165503 ENSGT00940000166532 ENSGT00940000157440.m.a ENSGT00940000155324.g.a.b.a.a ENSGT00940000155324.g.a.b.a.b ENSGT00940000155324.g.a.a ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT00950000183208.A.c.a.q #22 ENSGT00390000008033 #28 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.pb.b ENSGT00950000183114.a.b.b ENSGT00390000013151.a.a.a ENSGT00940000161997.a ENSGT00940000168817.l.a ENSGT00730000111912.A.b ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000154486.b.b.a.a ENSGT00940000155311.B ENSGT00530000063599.B.j ENSGT00390000006330.a.a.b ENSGT00390000010463.a.b.c.a Sailfin molly MODERN SPECIES 2053 zeb2b (ENSPLAG00000012661) #22 Amazon molly MODERN SPECIES 479 MBD5 (ENSPFOG00000004180) orc4 (ENSPFOG00000004221) ACVR2A (ENSPFOG00000004465) zeb2b (ENSPFOG00000004757) #22 KYNU (ENSPFOG00000004972) #28 ENSPFOG00000005403 ENSPFOG00000005929 bzw1a (ENSPFOG00000004908) AOX1 (ENSPFOG00000005969) sh3bp4a (ENSPFOG00000007010) s100b (ENSPFOG00000007041) Guppy MODERN SPECIES 264 zeb2b (ENSPREG00000004470) #22 Poecilia ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.r #22 NAME_6 ANCESTRAL SPECIES ENSGT00950000183208.A.c.a.r #22 Sailfin molly MODERN SPECIES 2133 ENSPLAG00000019039 #22 Guppy MODERN SPECIES 450 ENSPREG00000022296 ENSPREG00000022286 ENSPREG00000022274 ENSPREG00000022228 ENSPREG00000022203 ENSPREG00000022176 ENSPREG00000022159 ENSPREG00000022150 ENSPREG00000022144 ENSPREG00000022137 ENSPREG00000022126 KIF5C (ENSPREG00000022100) MBD5 (ENSPREG00000022088) orc4 (ENSPREG00000022075) ACVR2A (ENSPREG00000022059) ENSPREG00000022031 #22 KYNU (ENSPREG00000022003) #28 ENSPREG00000021979 ENSPREG00000021966 bzw1a (ENSPREG00000021850) aox1 (ENSPREG00000021723) ENSPREG00000021699 sh3bp4a (ENSPREG00000021689) s100b (ENSPREG00000021673) ENSPREG00000021664 ENSPREG00000021575 ENSPREG00000021486 ahr1b (ENSPREG00000021437) ENSPREG00000021411 mfsd6a (ENSPREG00000021378) nab1a (ENSPREG00000021362) Platyfish MODERN SPECIES 16 ENSXMAG00000002142 ENSXMAG00000026901 ENSXMAG00000020912 ENSXMAG00000002166 si:dkey-276j7.1 (ENSXMAG00000029107) ENSXMAG00000002174 ENSXMAG00000029440 ENSXMAG00000005175 ENSXMAG00000029571 ENSXMAG00000025243 KIF5C (ENSXMAG00000010638) kif5c (ENSXMAG00000027692) MBD5 (ENSXMAG00000010633) orc4 (ENSXMAG00000010615) ACVR2A (ENSXMAG00000010594) zeb2b (ENSXMAG00000010581) #22 ENSXMAG00000021934 KYNU (ENSXMAG00000010565) #28 ENSXMAG00000010550 ENSXMAG00000029902 bzw1a (ENSXMAG00000026117) aox1 (ENSXMAG00000010446) ENSXMAG00000000086 sh3bp4a (ENSXMAG00000010440) s100b (ENSXMAG00000010438) ENSXMAG00000027895 ENSXMAG00000026509 ahr1b (ENSXMAG00000010418) ENSXMAG00000010417 mfsd6a (ENSXMAG00000010414) ENSXMAG00000024985 Oryzias ANCESTRAL SPECIES 40 ENSGT00940000154486.b.b.a.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000177277 ENSGT00940000161997.a ENSGT00390000013151.a.a.a ENSGT00940000160639.a ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b ENSGT00940000166136 ENSGT00940000167103 ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT01040000240400.c.a.b.b ENSGT00950000183208.A.c.a #22 ENSGT00950000183184.a.a.b ENSGT00390000006826 ENSGT00940000165235.a.a ENSGT00940000155675.p.b ENSGT00950000183140.a.a ENSGT00550000074981 ENSGT00510000047334 ENSGT00940000155749.d ENSGT00940000154360.A.b.b ENSGT00940000162768.B.b ENSGT00390000004923.C ENSGT00390000001718.b ENSGT00950000183038.a.b.b.b.r ENSGT00950000183165.a.a.a ENSGT00940000154657.A.d Oryzias_b ANCESTRAL SPECIES 50 ENSGT00940000177277 ENSGT00940000161997.a ENSGT00390000013151.a.a.a ENSGT00940000160639.a ENSGT01100000263998 ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b ENSGT00940000166136 ENSGT00940000160835 ENSGT00940000167103 ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT01040000240400.c.a.b.b ENSGT00950000183208.A.c.a #22 ENSGT00950000183184.a.a.b ENSGT00390000006826 ENSGT00940000165235.a.a ENSGT00940000155675.p.b ENSGT00950000183140.a.a ENSGT00550000074981 ENSGT00510000047334 ENSGT00940000155749.d ENSGT00940000154360.A.b.b ENSGT00940000162768.B.b ENSGT00390000004923.C ENSGT00390000001718.b ENSGT00950000183038.a.b.b.b.r ENSGT00950000183165.a.a.a ENSGT00940000154657.A.d Indian medaka MODERN SPECIES 20 sh3bp4a (ENSOMEG00000019774) ENSOMEG00000019798 ENSOMEG00000019814 AOX1 (ENSOMEG00000019941) bzw1a (ENSOMEG00000019988) ENSOMEG00000020006 ENSOMEG00000020038 ENSOMEG00000020053 ENSOMEG00000020061 KIF5C (ENSOMEG00000020228) MBD5 (ENSOMEG00000020281) orc4 (ENSOMEG00000020335) ACVR2A (ENSOMEG00000020423) ENSOMEG00000020445 ENSOMEG00000020453 zeb2b (ENSOMEG00000020511) #22 FAM171B (ENSOMEG00000020541) ENSOMEG00000020567 ENSOMEG00000020589 ENSOMEG00000020601 ENSOMEG00000020623 pwp2h (ENSOMEG00000020671) eed (ENSOMEG00000020708) ENSOMEG00000020746 ENSOMEG00000020760 LRRC3 (ENSOMEG00000020765) ENSOMEG00000020811 ENSOMEG00000020831 gpd2 (ENSOMEG00000020845) NR4A2 (ENSOMEG00000020865) TUBA4A (ENSOMEG00000020878) Javanese ricefish MODERN SPECIES 11 sh3bp4a (ENSOJAG00000002935) ENSOJAG00000002924 ENSOJAG00000002919 ENSOJAG00000002914 bzw1a (ENSOJAG00000000657) ENSOJAG00000000650 ENSOJAG00000000641 ENSOJAG00000000634 KIF5C (ENSOJAG00000000574) ENSOJAG00000000556 MBD5 (ENSOJAG00000000554) orc4 (ENSOJAG00000000527) ACVR2A (ENSOJAG00000000471) ENSOJAG00000000428 ENSOJAG00000000414 zeb2b (ENSOJAG00000000338) #22 ENSOJAG00000000086 ENSOJAG00000000067 ENSOJAG00000022984 ENSOJAG00000022978 ENSOJAG00000022951 eed (ENSOJAG00000022814) ATP7B (ENSOJAG00000022389) LRRC3 (ENSOJAG00000022345) ENSOJAG00000022299 ENSOJAG00000022286 gpd2 (ENSOJAG00000021848) TUBA4A (ENSOJAG00000021745) ENSOJAG00000021533 ENSOJAG00000021491 inpp4ab (ENSOJAG00000020924) Oryzias_a ANCESTRAL SPECIES 56 ENSGT00940000155311.B ENSGT00940000154486.b.b.a.a ENSGT00940000154486.b.a.a.b.e.b ENSGT00940000161997.a ENSGT00390000013151.a.a.a ENSGT00940000160639.a ENSGT00950000183114.a.b.b ENSGT00390000012561.b.pb.b ENSGT00940000167103 ENSGT00940000158539.b ENSGT00530000064137.a.b ENSGT00390000016542 ENSGT00940000157233.c ENSGT01040000240400.c.a.b.b ENSGT01100000264591 ENSGT00950000183208.A.c.a #22 ENSGT00950000183184.a.a.b ENSGT00940000165235.a.a ENSGT00950000183140.a.a ENSGT00550000074981 ENSGT00510000047334 ENSGT00940000155749.d ENSGT00940000154360.A.b.b ENSGT00940000162768.B.b ENSGT00390000004923.C ENSGT00390000001718.b ENSGT00950000183038.a.b.b.b.r ENSGT00950000183165.a.a.a ENSGT00940000154657.A.d ENSGT00940000157360.c ENSGT00940000164908 Japanese Medaka HdrR MODERN SPECIES 11 ahr1b (ENSORLG00000000137) ENSORLG00000000135 s100b (ENSORLG00000028907) sh3bp4a (ENSORLG00000000133) ENSORLG00000026726 aox6 (ENSORLG00000000125) bzw1a (ENSORLG00000000117) ENSORLG00000000115 ENSORLG00000000112 KIF5C (ENSORLG00000000108) MBD5 (ENSORLG00000000104) orc4 (ENSORLG00000000103) ACVR2A (ENSORLG00000000099) ENSORLG00000027108 ENSORLG00000024724 zeb2b (ENSORLG00000000098) #22 ENSORLG00000000095 ENSORLG00000000091 ENSORLG00000023624 ENSORLG00000000079 ENSORLG00000029677 ENSORLG00000000068 pwp2h (ENSORLG00000000066) eed (ENSORLG00000030215) ENSORLG00000000063 LRRC3 (ENSORLG00000000061) ENSORLG00000000059 ENSORLG00000027750 gpd2 (ENSORLG00000000052) ENSORLG00000000050 ENSORLG00000000046 Chinese medaka MODERN SPECIES 381 ENSOSIG00000015293 zeb2b (ENSOSIG00000015256) #22 Tiger tail seahorse MODERN SPECIES 404 ENSHCOG00000017484 SLC9A2 (ENSHCOG00000017234) inpp4ab (ENSHCOG00000016979) zgc:113142 (ENSHCOG00000016820) ALS2 (ENSHCOG00000016773) MPP4 (ENSHCOG00000016686) tmem237b (ENSHCOG00000015966) cyp20a1 (ENSHCOG00000015947) abi2b (ENSHCOG00000015448) ENSHCOG00000015424 ENSHCOG00000015273 ENSHCOG00000015259 MBD5 (ENSHCOG00000015223) orc4 (ENSHCOG00000015200) ACVR2A (ENSHCOG00000015188) zeb2b (ENSHCOG00000015167) #22 ENSHCOG00000000763 MAGI3 (ENSHCOG00000015141) ENSHCOG00000015106 rca2.1 (ENSHCOG00000015077) ENSHCOG00000015058 kif3b (ENSHCOG00000015045) ENSHCOG00000015015 kif3b (ENSHCOG00000014998) PCMTD2 (ENSHCOG00000000727) MYT1 (ENSHCOG00000014939) TBC1D22B (ENSHCOG00000014913) snrpg (ENSHCOG00000014878) ENSHCOG00000014866 plpbp (ENSHCOG00000014847) tmed4 (ENSHCOG00000014723) Pinecone sodierfish MODERN SPECIES 11 ENSMMDG00005022217 KLHL10 (ENSMMDG00005022219) st6gal2b (ENSMMDG00005022221) ENSMMDG00005022223 nck2b (ENSMMDG00005022226) dph3 (ENSMMDG00005022230) ENSMMDG00005022235 ENSMMDG00005022237 fhl2b (ENSMMDG00005022240) ENSMMDG00005022243 ENSMMDG00005022250 KIF5C (ENSMMDG00005022336) MBD5 (ENSMMDG00005022339) orc4 (ENSMMDG00005022341) ACVR2A (ENSMMDG00005022347) zeb2b (ENSMMDG00005022363) #22 ENSMMDG00005022368 KYNU (ENSMMDG00005022372) #28 ENSMMDG00005022381 ENSMMDG00005022385 bzw1a (ENSMMDG00005022388) AOX1 (ENSMMDG00005022409) ENSMMDG00005022414 sh3bp4a (ENSMMDG00005022415) s100b (ENSMMDG00005022417) ENSMMDG00005022419 ENSMMDG00005022420 ENSMMDG00005022423 ftcd (ENSMMDG00005002661) mstna (ENSMMDG00005002688) stat1a (ENSMMDG00005002760) Cod MODERN SPECIES 56 ENSGMOG00000014388 #22 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 277 ENSGT00940000153470.a.a.a.a.h ENSGT00390000001170.a.b ENSGT00940000155759.c ENSGT00940000160383 ENSGT00940000171141 ENSGT00940000154311.b ENSGT00530000063686.a.a ENSGT00940000157541.e ENSGT00390000015050.`b.b ENSGT00390000000220.B.c.a ENSGT00390000000220.B.c.b ENSGT00940000158539.a.l ENSGT00940000158526 ENSGT00530000064137.a.b.c ENSGT00940000157233.b ENSGT00950000183208.A.c.a.s #22 ENSGT00900000143214 #23 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00390000008033 #28 ENSGT00940000157521.a.a.a.a Asian bonytongue MODERN SPECIES 13 tmem163a (ENSSFOG00015013757) acmsd (ENSSFOG00015013796) CCNT2 (ENSSFOG00015013826) rab3gap1 (ENSSFOG00015013870) ZRANB3 (ENSSFOG00015014001) R3HDM1 (ENSSFOG00015014134) UBXN4 (ENSSFOG00015014378) rnd3a (ENSSFOG00015030279) mmadhca (ENSSFOG00015014453) LYPD6 (ENSSFOG00015014472) KIF5C (ENSSFOG00015014505) epc2 (ENSSFOG00015014568) MBD5 (ENSSFOG00015006495) ACVR2A (ENSSFOG00015006516) ENSSFOG00015028999 zeb2b (ENSSFOG00015006557) #22 ENSSFOG00015024415 #23 gtdc1 (ENSSFOG00015006586) #25 arhgap15 (ENSSFOG00015006616) #27 KYNU (ENSSFOG00015006641) #28 LRP1B (ENSSFOG00015006789) bzw1a (ENSSFOG00015007027) ARL4C (ENSSFOG00015024371) sh3bp4a (ENSSFOG00015007127) ENSSFOG00015007141 s100b (ENSSFOG00015029983) ENSSFOG00015029802 ENSSFOG00015029155 ENSSFOG00015007166 ndufa10 (ENSSFOG00015007190) ENSSFOG00015007210 P. kingsleyae MODERN SPECIES 151 rnd3a (ENSPKIG00000011603) MMADHC (ENSPKIG00000011626) lypd6 (ENSPKIG00000011656) KIF5C (ENSPKIG00000011708) ENSPKIG00000011799 ENSPKIG00000011811 MBD5 (ENSPKIG00000011828) ACVR2A (ENSPKIG00000011845) ENSPKIG00000011877 zeb2b (ENSPKIG00000011898) #22 ENSPKIG00000011922 gtdc1 (ENSPKIG00000011945) #25 arhgap15 (ENSPKIG00000012000) #27 KYNU (ENSPKIG00000012039) #28 ENSPKIG00000012059 LRP1B (ENSPKIG00000012105) TMEM256 (ENSPKIG00000012256) ENSPKIG00000012266 bzw1a (ENSPKIG00000012285) ENSPKIG00000012315 Osteoglossiformes ANCESTRAL SPECIES 345 ENSGT00390000015050.`b.a ENSGT00390000000220.B.d ENSGT00390000000220.A ENSGT00940000158539.a.k ENSGT00530000064137.a.b.d ENSGT00390000016542 ENSGT00940000157233.a ENSGT00950000183208.A.c.a.t #22 ENSGT00940000167103 ENSGT00940000166136 ENSGT00390000012561.b.nb ENSGT00950000183114.a.b.b ENSGT00940000160639.b.b ENSGT00390000013151.a.a.a.f Asian bonytongue MODERN SPECIES 3 TMEM163 (ENSSFOG00015020195) CCNT2 (ENSSFOG00015020175) ENSSFOG00015020163 ENSSFOG00015019851 ENSSFOG00015030318 ENSSFOG00015019700 rnd3a (ENSSFOG00015028705) mmadhcb (ENSSFOG00015019602) ENSSFOG00015026236 lypd6b (ENSSFOG00015024714) KIF5C (ENSSFOG00015019517) EPC2 (ENSSFOG00015019449) MBD5 (ENSSFOG00015019421) orc4 (ENSSFOG00015019383) ACVR2A (ENSSFOG00015026082) zeb2b (ENSSFOG00015019297) #22 ENSSFOG00015019155 ENSSFOG00015019073 ENSSFOG00015030562 bzw1a (ENSSFOG00015019024) aox5 (ENSSFOG00015018805) ADPRH (ENSSFOG00015018749) ENSSFOG00015018683 ARL4C (ENSSFOG00015025876) sh3bp4a (ENSSFOG00015018596) ENSSFOG00015018575 ENSSFOG00015028806 ENSSFOG00015017761 ENSSFOG00015027148 ENSSFOG00015017617 ENSSFOG00015017574 P. kingsleyae MODERN SPECIES 192 CCNT2 (ENSPKIG00000004631) ENSPKIG00000004594 ENSPKIG00000004579 R3HDM1 (ENSPKIG00000004328) ENSPKIG00000004064 rnd3a (ENSPKIG00000003968) mmadhcb (ENSPKIG00000003948) ENSPKIG00000003918 lypd6b (ENSPKIG00000003883) KIF5C (ENSPKIG00000003824) EPC2 (ENSPKIG00000003738) ENSPKIG00000003700 MBD5 (ENSPKIG00000003673) orc4 (ENSPKIG00000003619) ACVR2A (ENSPKIG00000003523) zeb2b (ENSPKIG00000003462) #22 Spotted gar MODERN SPECIES 650 ZRANB3 (ENSLOCG00000001673) R3HDM1 (ENSLOCG00000001641) UBXN4 (ENSLOCG00000001630) ENSLOCG00000001612 NMI (ENSLOCG00000001598) ENSLOCG00000001583 rnd3b (ENSLOCG00000001573) mmadhca (ENSLOCG00000001561) lypd6 (ENSLOCG00000001546) lypd6b (ENSLOCG00000001536) KIF5C (ENSLOCG00000001468) epc2 (ENSLOCG00000001437) MBD5 (ENSLOCG00000001417) orc4 (ENSLOCG00000001369) acvr2aa (ENSLOCG00000001336) zeb2b (ENSLOCG00000001301) #22 gtdc1 (ENSLOCG00000001286) #25 arhgap15 (ENSLOCG00000001273) #27 KYNU (ENSLOCG00000001250) #28 ENSLOCG00000017825 LRP1B (ENSLOCG00000001123) ENSLOCG00000001087 ENSLOCG00000001058 NXPH2 (ENSLOCG00000001038) spopla (ENSLOCG00000001012) HNMT (ENSLOCG00000000995) hnmt (ENSLOCG00000000982) THSD7B (ENSLOCG00000000959) cxcr4a (ENSLOCG00000000937) dars1 (ENSLOCG00000000902) mcm6 (ENSLOCG00000000872) Elephant shark MODERN SPECIES 1531 ENSCMIG00000010264 ENSCMIG00000010279 ENSCMIG00000010283 nmi (ENSCMIG00000010291) ENSCMIG00000010299 rnd3b (ENSCMIG00000010307) SPATA24 (ENSCMIG00000010319) mmadhca (ENSCMIG00000010322) lypd6 (ENSCMIG00000010328) lypd6b (ENSCMIG00000010332) KIF5C (ENSCMIG00000010334) epc2 (ENSCMIG00000010341) MBD5 (ENSCMIG00000010349) orc4 (ENSCMIG00000010361) acvr2aa (ENSCMIG00000010399) zeb2b (ENSCMIG00000010466) #22 gtdc1 (ENSCMIG00000010473) #25 ARHGAP15 (ENSCMIG00000010475) #27 KYNU (ENSCMIG00000010480) #28 ENSCMIG00000010485 LRP1B (ENSCMIG00000010555) ENSCMIG00000010783 Gnathostomata ANCESTRAL SPECIES ENSGT00950000183208.A.c.b ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00950000183208.A.c.b ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00950000183208.A.c.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT00950000183208.A.c.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000183208.A.c.b ##22 Clupeocephala ANCESTRAL SPECIES 129 ENSGT00950000182905.a.a.a.a.b ENSGT00940000167133 ENSGT00940000160544 ENSGT01090000259987.a.a.a ENSGT00940000155992.c.a ENSGT00530000063273.b.a.a ENSGT00940000178952 ENSGT00720000108822 ENSGT00940000153969.b ENSGT00940000165503 ENSGT00940000166532 ENSGT00940000157440.m.a ENSGT00940000155324 ENSGT00940000166747 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00940000181338 ENSGT00940000160639.b.a.b.a ENSGT00390000013151.a.a.b ENSGT00940000160532.h ENSGT00510000049102 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.e.a.a.a ENSGT00940000154486.b.b.a.b ENSGT00940000162556.A.b Otomorpha ANCESTRAL SPECIES 249 ENSGT00940000160205 ENSGT00940000165390.a ENSGT00940000154311.b ENSGT00530000063686.a.a ENSGT00940000157541.f.b ENSGT00940000157541.f.a ENSGT00390000015050.`b.a ENSGT00390000000220.B.c.a ENSGT00390000000220.A ENSGT00940000158539.a ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00940000160639.b.a.b.b.b ENSGT00390000013151.a.a.b ENSGT00940000160532.h.b ENSGT00510000049102 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.e.a.a.a ENSGT00940000154486.b.b.a.b ENSGT00940000162556.A.b ENSGT00390000007364.i ENSGT00940000158837 ENSGT00940000154311.a.b ENSGT00940000165191 ENSGT00940000155282 Clupeiformes ANCESTRAL SPECIES 318 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00940000160639.b.b ENSGT00390000013151.a.a.b ENSGT00940000160532.h.b ENSGT00530000065251.b ENSGT00510000049102 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.e.a.a.a ENSGT00940000154486.b.b.a.b ENSGT00940000162556.A.b ENSGT00390000007364.i ENSGT00940000158837 ENSGT00940000154311.a.b ENSGT00940000165191 Atlantic herring MODERN SPECIES 11 uxs1 (ENSCHAG00000020918) ecrg4a (ENSCHAG00000020910) ENSCHAG00000020898 ENSCHAG00000020891 ENSCHAG00000020875 FHL2 (ENSCHAG00000020834) si:dkeyp-118h3.6 (ENSCHAG00000020826) mmadhcb (ENSCHAG00000020810) LYPD6 (ENSCHAG00000020799) lypd6b (ENSCHAG00000020782) KIF5C (ENSCHAG00000020504) ENSCHAG00000020483 epc2 (ENSCHAG00000020427) ENSCHAG00000020409 acvr2aa (ENSCHAG00000019235) zeb2a (ENSCHAG00000019144) ##22 gtdc1 (ENSCHAG00000019106) #25 arhgap15 (ENSCHAG00000019010) #27 ADPRH (ENSCHAG00000018999) ARL4C (ENSCHAG00000018993) sh3bp4 (ENSCHAG00000018981) ENSCHAG00000018949 ENSCHAG00000016312 ENSCHAG00000016249 gypc (ENSCHAG00000016222) ndufa10 (ENSCHAG00000016156) ENSCHAG00000015809 ahr1b (ENSCHAG00000015641) ENSCHAG00000015628 faima (ENSCHAG00000015598) ENSCHAG00000015546 Denticle herring MODERN SPECIES 19 ENSDCDG00000022998 ENSDCDG00000022999 ENSDCDG00000023000 ccnb3 (ENSDCDG00000023001) ENSDCDG00000023002 ENSDCDG00000023005 ENSDCDG00000023008 rif1 (ENSDCDG00000014194) PTGFRN (ENSDCDG00000014740) igsf3l (ENSDCDG00000014764) ENSDCDG00000014774 igsf3 (ENSDCDG00000014788) ENSDCDG00000014814 tnfaip6 (ENSDCDG00000014855) acvr2aa (ENSDCDG00000014876) zeb2a (ENSDCDG00000015413) ##22 gtdc1 (ENSDCDG00000015415) #25 arhgap15 (ENSDCDG00000015421) #27 arl4cb (ENSDCDG00000016126) sh3bp4 (ENSDCDG00000016129) ENSDCDG00000016132 ENSDCDG00000016135 ENSDCDG00000016255 ENSDCDG00000017006 ENSDCDG00000017010 ENSDCDG00000017013 ENSDCDG00000017021 ndufa10 (ENSDCDG00000017034) ENSDCDG00000017141 ENSDCDG00000017142 faima (ENSDCDG00000017144) Otophysi ANCESTRAL SPECIES 98 ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00730000111249.f ENSGT00940000155868.f ENSGT00390000001083 ENSGT00950000182808.a.a.a.a.a ENSGT00390000007644 ENSGT00940000163874 ENSGT00940000158318 ENSGT00980000203459 ENSGT00950000182906.b.b ENSGT00390000016696 ENSGT00940000162599 ENSGT00940000160342.e ENSGT00470000042284 Characiphysae ANCESTRAL SPECIES 107 ENSGT00940000155759.e.a ENSGT00940000160383.e ENSGT00940000158539.a ENSGT00390000000220.A ENSGT00390000000220.B.c.a ENSGT00390000015050.`b.a ENSGT00940000157541.f.a ENSGT00940000157541.f.b ENSGT00530000063686.a.a ENSGT00940000165390.a ENSGT00940000160205 ENSGT00390000006705 ENSGT00940000156095.m.b ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00730000111249.f ENSGT00940000155868.f Channel catfish MODERN SPECIES 25 ccnt2a (ENSIPUG00000002060) ENSIPUG00000002052 KIF5C (ENSIPUG00000002020) lypd6b (ENSIPUG00000002010) Lypd6 (ENSIPUG00000001987) mmadhcb (ENSIPUG00000001943) rnd3b (ENSIPUG00000001926) RND3 (ENSIPUG00000001902) nmi (ENSIPUG00000001883) ENSIPUG00000001876 UBXN4 (ENSIPUG00000001849) rab3gap1 (ENSIPUG00000001801) R3HDM1 (ENSIPUG00000001676) epc2 (ENSIPUG00000001653) acvr2aa (ENSIPUG00000001630) zeb2a (ENSIPUG00000001605) ##22 gtdc1 (ENSIPUG00000001575) #25 arhgap15 (ENSIPUG00000001559) #27 arglu1 (ENSIPUG00000001542) efnb2a (ENSIPUG00000001518) sec22a (ENSIPUG00000001444) adcy5 (ENSIPUG00000001390) PTPLB (ENSIPUG00000001338) stam2 (ENSIPUG00000001294) cacnb4a (ENSIPUG00000001244) ENSIPUG00000001224 zgc:162396 (ENSIPUG00000001213) ENSIPUG00000001199 ENSIPUG00000001178 zgc:162396 (ENSIPUG00000001171) zgc:162396 (ENSIPUG00000001159) Characiphysae_b ANCESTRAL SPECIES 98 ENSGT00940000160383.e ENSGT00940000160383.f ENSGT00940000158539.a ENSGT00390000000220.A ENSGT00390000000220.B.c.a ENSGT00390000015050.`b.a ENSGT00940000157541.f.a ENSGT00940000157541.f.b ENSGT00530000063686.a.a ENSGT00940000165390.a ENSGT00940000160205 ENSGT00390000006705 ENSGT00940000156095.m.b ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00730000111249.f ENSGT00940000155868.f Characoidei ANCESTRAL SPECIES 396 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00730000111249.f ENSGT00940000155868.f Red-bellied piranha MODERN SPECIES 255 epc2 (ENSPNAG00000002277) zeb2a (ENSPNAG00000012558) ##22 gtdc1 (ENSPNAG00000012598) #25 arhgap15 (ENSPNAG00000012644) #27 arglu1a (ENSPNAG00000012659) efnb2a (ENSPNAG00000012693) Mexicana tetra MODERN SPECIES 10 ENSAMXG00000039670 ENSAMXG00000037377 ENSAMXG00000041942 ENSAMXG00000043262 ENSAMXG00000029736 ENSAMXG00000035655 ENSAMXG00000015097 ENSAMXG00000039355 ENSAMXG00000041983 ENSAMXG00000033010 ENSAMXG00000029102 ENSAMXG00000030310 ENSAMXG00000030445 ENSAMXG00000041529 ENSAMXG00000036236 zeb2a (ENSAMXG00000012825) ##22 gtdc1 (ENSAMXG00000012801) #25 arhgap15 (ENSAMXG00000012771) #27 ENSAMXG00000030974 arglu1a (ENSAMXG00000040993) efnb2a (ENSAMXG00000012739) ENSAMXG00000038504 ENSAMXG00000030710 ENSAMXG00000038472 ENSAMXG00000011058 MCF2L (ENSAMXG00000011036) ENSAMXG00000011020 ENSAMXG00000011002 ENSAMXG00000030358 ENSAMXG00000030023 dnajc3a (ENSAMXG00000034027) Electric eel MODERN SPECIES 270 epc2 (ENSEEEG00000010378) acvr2aa (ENSEEEG00000010382) zeb2a (ENSEEEG00000010429) ##22 gtdc1 (ENSEEEG00000010431) #25 arhgap15 (ENSEEEG00000010433) #27 arglu1a (ENSEEEG00000010436) efnb2a (ENSEEEG00000010437) Cyprinoidei ANCESTRAL SPECIES 71 ENSGT00940000165788 ENSGT00940000160335 ENSGT00940000155282 ENSGT00940000160585 ENSGT00940000159528 ENSGT01040000240539.b ENSGT00390000011864 ENSGT01050000244937.a.a.r ENSGT00390000012063 ENSGT00950000183115.b.a.m.a ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00730000111249.f ENSGT00940000155868.f ENSGT00390000001083 ENSGT00950000182808.a.a.a.a.a ENSGT00940000166466.e.a ENSGT00390000007644 ENSGT00940000163874 ENSGT00940000158318 ENSGT00980000203459 ENSGT00950000182906.b.b ENSGT00390000016696 ENSGT00940000162599 ENSGT00940000160342.e Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 900 ENSGT00950000183208.A.c.b.a ##22 ENSGT00390000006631.b #25 ENSGT00950000182860.a.b.b.b #27 ENSGT00730000111249.f.b ENSGT00940000155868.f.a ENSGT00990000210091 Goldfish MODERN SPECIES 49 ENSCARG00000002181 chaf1b (ENSCARG00000002155) ENSCARG00000001848 srpx (ENSCARG00000001802) ENSCARG00000001782 OTC (ENSCARG00000001765) mid1ip1a (ENSCARG00000001758) ENSCARG00000001754 acvr2aa (ENSCARG00000001724) epc2 (ENSCARG00000001715) itm2bb (ENSCARG00000069406) med4 (ENSCARG00000069386) HTR2A (ENSCARG00000069378) esd (ENSCARG00000069364) LRCH1 (ENSCARG00000069280) zeb2a (ENSCARG00000069258) ##22 gtdc1 (ENSCARG00000069251) #25 arhgap15 (ENSCARG00000069237) #27 crygs2 (ENSCARG00000069223) lcmt2 (ENSCARG00000069199) tbccd1 (ENSCARG00000069185) rab5b (ENSCARG00000069179) dbr1 (ENSCARG00000069177) ENSCARG00000069172 armc8 (ENSCARG00000068631) ENSCARG00000068508 efnb2a (ENSCARG00000068498) arglu1a (ENSCARG00000068488) SYTL5 (ENSCARG00000068455) asb11 (ENSCARG00000068436) piga (ENSCARG00000068391) Cyprininae_a ANCESTRAL SPECIES 564 ENSGT00390000011864.lb ENSGT01050000244937.a.a.r.a ENSGT00390000012063.r ENSGT00950000183115.b.a.m.a.g ENSGT00940000158526.q ENSGT00940000157233.d.b ENSGT00950000183208.A.c.b.a ##22 ENSGT00390000006631.b #25 ENSGT00950000182860.a.b.b.b #27 ENSGT00730000111249.f.b ENSGT00940000155868.f.a ENSGT00990000210091 Common carp reference MODERN SPECIES 46 ENSCCRG00000080642 cavin2a (ENSCCRG00000078445) tmeff2a (ENSCCRG00000028574) ENSCCRG00000062919 ENSCCRG00000071997 slc39a10 (ENSCCRG00000059358) DNAH7 (ENSCCRG00000032206) RUBCNL (ENSCCRG00000048959) LRCH1 (ENSCCRG00000065088) esd (ENSCCRG00000045893) HTR2A (ENSCCRG00000045888) med4 (ENSCCRG00000071131) itm2bb (ENSCCRG00000072380) epc2 (ENSCCRG00000036485) acvr2aa (ENSCCRG00000030240) zeb2a (ENSCCRG00000028151) ##22 gtdc1 (ENSCCRG00000071619) #25 arglu1a (ENSCCRG00000008160) arhgap15 (ENSCCRG00000020455) #27 efnb2a (ENSCCRG00000068680) ENSCCRG00000080738 slc10a2 (ENSCCRG00000014101) nepro (ENSCCRG00000014097) ENSCCRG00000014090 poglut2 (ENSCCRG00000055120) ENSCCRG00000078112 stxbp5l (ENSCCRG00000028134) gtf2e1 (ENSCCRG00000006759) lcmt2 (ENSCCRG00000006763) crygs2 (ENSCCRG00000006767) tbccd1 (ENSCCRG00000023688) Golden-line barbel MODERN SPECIES 546 cavin2a (ENSSGRG00000050964) tmeff2a (ENSSGRG00000050966) slc39a10 (ENSSGRG00000050968) ENSSGRG00000050969 ENSSGRG00000050970 ENSSGRG00000050971 ENSSGRG00000050972 RUBCNL (ENSSGRG00000050973) LRCH1 (ENSSGRG00000050979) esd (ENSSGRG00000050982) HTR2A (ENSSGRG00000051010) med4 (ENSSGRG00000051012) itm2bb (ENSSGRG00000051033) epc2 (ENSSGRG00000051043) acvr2aa (ENSSGRG00000051044) zeb2a (ENSSGRG00000051068) ##22 gtdc1 (ENSSGRG00000051071) #25 arhgap15 (ENSSGRG00000051073) #27 arglu1a (ENSSGRG00000051074) efnb2a (ENSSGRG00000051075) Cyprininae ANCESTRAL SPECIES 16 ENSGT00940000160585 ENSGT00940000159528.f.a.a ENSGT00390000011864.lb ENSGT01050000244937.a.a.r.a ENSGT00390000012063.r ENSGT00950000183115.b.a.m.a.g ENSGT00940000158526.q ENSGT00940000157233.d.b ENSGT00940000159528.e ENSGT00390000011864.mb ENSGT01050000244937.a.a.r.b ENSGT00390000012063.q ENSGT00950000183115.b.a.m.a.h ENSGT00940000158526.r ENSGT00940000157233.d.a ENSGT00950000183208.A.c.b.b ##22 ENSGT00390000006631.a #25 ENSGT00950000182860.a.b.b.a #27 ENSGT00730000111249.f.a ENSGT00940000155868.f.b.b ENSGT00390000001083 ENSGT00950000182808.a.a.a.a.a.h ENSGT00390000007644.c ENSGT00940000163874 ENSGT00940000158318 ENSGT00950000182906.b.b.j ENSGT00950000182906.b.b.i ENSGT00390000016696.g ENSGT00940000160342.e.b ENSGT00470000042284.b ENSGT00940000166096.d Goldfish MODERN SPECIES 27 maip1 (ENSCARG00000007267) ENSCARG00000007206 HECW2 (ENSCARG00000007119) stk17b (ENSCARG00000007085) zgc:153521 (ENSCARG00000007072) cavin2a (ENSCARG00000007030) tmeff2a (ENSCARG00000006981) slc39a10 (ENSCARG00000006918) LRCH1 (ENSCARG00000006535) esd (ENSCARG00000006417) HTR2A (ENSCARG00000006400) med4 (ENSCARG00000006375) itm2bb (ENSCARG00000006366) epc2 (ENSCARG00000005979) acvr2aa (ENSCARG00000005885) zeb2a (ENSCARG00000046791) ##22 gtdc1 (ENSCARG00000046778) #25 arhgap15 (ENSCARG00000046746) #27 arglu1a (ENSCARG00000046730) efnb2a (ENSCARG00000046715) ENSCARG00000046707 gtpbp8 (ENSCARG00000046699) slc10a2 (ENSCARG00000046667) tlr20.2 (ENSCARG00000046638) ENSCARG00000046628 ENSCARG00000046617 stxbp5l (ENSCARG00000046351) gtf2e1 (ENSCARG00000046283) crygs2 (ENSCARG00000046258) tbccd1 (ENSCARG00000046247) rab5b (ENSCARG00000046225) Cyprininae_a ANCESTRAL SPECIES 205 ENSGT00940000155812 ENSGT00950000182910.a.a.c.c ENSGT00940000156056.A.b.a.a ENSGT00940000156056.A.a ENSGT00940000160335.h ENSGT00940000155282.f ENSGT00940000160585 ENSGT00940000159528.f.a.a ENSGT00940000159528.e ENSGT00390000011864.mb ENSGT01050000244937.a.a.r.b ENSGT00390000012063.q ENSGT00950000183115.b.a.m.a.h ENSGT00940000158526.r ENSGT00940000157233.d.a ENSGT00950000183208.A.c.b.b ##22 ENSGT00390000006631.a #25 ENSGT00950000182860.a.b.b.a #27 ENSGT00730000111249.f.a ENSGT00940000155868.f.b.b ENSGT00390000001083 ENSGT00950000182808.a.a.a.a.a.g ENSGT00940000166466.e.a ENSGT00390000007644.d Common carp reference MODERN SPECIES 41 ENSCCRG00000008012 nabp1a (ENSCCRG00000079565) cavin2a (ENSCCRG00000006447) ENSCCRG00000055466 tmeff2a (ENSCCRG00000026162) ENSCCRG00000054412 ENSCCRG00000054189 slc39a10 (ENSCCRG00000031869) LRCH1 (ENSCCRG00000068869) esd (ENSCCRG00000078861) HTR2A (ENSCCRG00000058961) med4 (ENSCCRG00000036593) itm2bb (ENSCCRG00000036536) epc2 (ENSCCRG00000072265) acvr2aa (ENSCCRG00000066448) zeb2a (ENSCCRG00000061380) ##22 arhgap15 (ENSCCRG00000028170) #27 gtdc1 (ENSCCRG00000028168) #25 arglu1a (ENSCCRG00000060356) efnb2a (ENSCCRG00000074165) ENSCCRG00000062032 gtpbp8 (ENSCCRG00000055105) slc10a2 (ENSCCRG00000006965) tlr20.2 (ENSCCRG00000081428) stxbp5l (ENSCCRG00000006964) gtf2e1 (ENSCCRG00000028740) crygs2 (ENSCCRG00000028289) tbccd1 (ENSCCRG00000023575) rab5b (ENSCCRG00000067152) dbr1 (ENSCCRG00000023585) armc8 (ENSCCRG00000031008) Golden-line barbel MODERN SPECIES 858 zeb2a (ENSSGRG00000030189) ##22 gtdc1 (ENSSGRG00000030179) #25 arhgap15 (ENSSGRG00000030178) #27 efnb2a (ENSSGRG00000030172) Zebrafish MODERN SPECIES 24 ftcdnl1 (ENSDARG00000062423) nabp1a (ENSDARG00000004692) cavin2a (ENSDARG00000027611) tmeff2a (ENSDARG00000051824) ENSDARG00000044355 slc39a10 (ENSDARG00000005823) DNAH7 (ENSDARG00000060165) ENSDARG00000088402 LRCH1 (ENSDARG00000078778) esd (ENSDARG00000019496) HTR2A (ENSDARG00000057029) med4 (ENSDARG00000041503) itm2bb (ENSDARG00000041505) epc2 (ENSDARG00000007485) acvr2aa (ENSDARG00000011188) zeb2a (ENSDARG00000062338) ##22 gtdc1 (ENSDARG00000020642) #25 arhgap15 (ENSDARG00000062349) #27 arglu1a (ENSDARG00000019223) efnb2a (ENSDARG00000020164) ENSDARG00000094811 gtpbp8 (ENSDARG00000075033) slc10a2 (ENSDARG00000014916) ENSDARG00000115923 tlr20.2 (ENSDARG00000088701) ENSDARG00000114057 ENSDARG00000092668 nepro (ENSDARG00000043566) ENSDARG00000030636 poglut2 (ENSDARG00000031971) ENSDARG00000094791 Euteleosteomorpha ANCESTRAL SPECIES 29 ENSGT01030000234607.A.a.a.a.d ENSGT00390000006705 ENSGT00940000156095.m.b ENSGT00940000160205 ENSGT00940000165390.a ENSGT00940000154311.b ENSGT00530000063686.a.a ENSGT00940000157541.f.c ENSGT00940000157541.f.d ENSGT00390000015050.`b.a ENSGT00390000000220.B.c.b ENSGT00390000000220.A ENSGT00940000158539.a ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00940000181338 ENSGT00940000160639.b.a.b.a ENSGT00390000013151.a.a.b ENSGT00940000160532.h ENSGT00510000049102 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.e.a.a.a ENSGT00940000154486.b.b.a.b ENSGT00940000162556.A.b ENSGT00950000182836.b.b.b.a ENSGT00390000003874.a.a ENSGT00940000173884 ENSGT00940000158589.b.a Acanthomorphata ANCESTRAL SPECIES 51 ENSGT00390000006705 ENSGT00940000156095.m.b ENSGT00940000160205 ENSGT00940000165390.a ENSGT00940000154311.b ENSGT00530000063686.a.a ENSGT00940000157541.f.c ENSGT00940000157541.f.d ENSGT00390000015050.`b.a ENSGT00390000000220.B.c.b ENSGT00390000000220.A ENSGT00940000158539.a ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00940000181338 ENSGT00940000160639.b.a.b.a ENSGT00390000013151.a.a.b ENSGT00940000160532.h ENSGT00510000049102 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.e.a.a.a ENSGT00940000154486.b.b.a.b ENSGT00940000162556.A.b ENSGT00950000182836.b.b.b.a ENSGT00390000003874.a.a ENSGT01050000244857.B.b ENSGT00940000159052 Euacanthomorphacea ANCESTRAL SPECIES 113 ENSGT00390000006705 ENSGT00940000156095.m.b ENSGT00940000160205 ENSGT00940000165390.a ENSGT00530000063686.a.a ENSGT00940000157541.f.c ENSGT00940000157541.f.d ENSGT00390000015050.`b.a ENSGT00390000000220.B.c.b ENSGT00390000000220.A ENSGT00940000158539.a ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00940000181338 Percomorphaceae ANCESTRAL SPECIES 136 ENSGT00940000158539.a ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00940000181338 Percomorphaceae_B ANCESTRAL SPECIES 45 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00940000157233.d ENSGT00940000158526 ENSGT00940000158539.a ENSGT00950000182860.a.b.b #27 ENSGT00940000181338 Ovalentaria ANCESTRAL SPECIES 27 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158539.a ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT01100000263523.A.z.d.h ENSGT01100000263523.G.a.b.b ENSGT01100000263523.H.a ENSGT01100000263532.C.d.b.b ENSGT01100000263523.J ENSGT01100000263523.I.b ENSGT01100000263523.I.a.a.b ENSGT01100000263523.F ENSGT01100000263523.E ENSGT01100000263532.C.c.b ENSGT00940000156449.b.b ENSGT01000000215047 ENSGT00940000157879 ENSGT01030000234640.a.b.a.b Atherinomorphae ANCESTRAL SPECIES 60 ENSGT00950000182860.a.b.b #27 ENSGT00940000158539.a ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00940000154551.b.h.b ENSGT00940000157879 ENSGT01030000234640.a.b.a.b ENSGT00940000158193 ENSGT00510000047718.d ENSGT00940000164964.b ENSGT00940000164697.a ENSGT01100000263523.A.z.d.g.b ENSGT01100000263532.B.a.b ENSGT00940000177542 ENSGT01100000263532.A.b.d ENSGT01100000263532.A.a.b.h.a ENSGT00940000171516 ENSGT01100000263532.A.a.a.b.b.a.a.a Cyprinodontiformes ANCESTRAL SPECIES 57 ENSGT00950000182860.a.b.b #27 ENSGT00940000158539.a ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00940000154551.b.h.a.a.a ENSGT00940000154551.b.h.a.a.b.a ENSGT00940000157879 ENSGT01030000234640.a.b.a.b ENSGT00940000158193 ENSGT00510000047718.d ENSGT00940000164964.b ENSGT00940000164697.a ENSGT01100000263523.A.z.d.g.b ENSGT01100000263532.B.a.b.b ENSGT00940000177542 ENSGT01100000263532.A.b.d ENSGT01100000263532.A.a.b.i ENSGT00940000171516 Aplocheiloidei ANCESTRAL SPECIES ENSGT00950000183208.A.c.b ##22 Mangrove rivulus MODERN SPECIES 767 CDK16 (ENSKMAG00000014627) abt1 (ENSKMAG00000014675) rad51c (ENSKMAG00000014692) zeb2a (ENSKMAG00000014703) ##22 Turquoise killifish MODERN SPECIES 1617 ENSNFUG00015007634 ENSNFUG00015007644 ENSNFUG00015007651 ENSNFUG00015007657 ENSNFUG00015007660 ENSNFUG00015007667 ENSNFUG00015007672 ENSNFUG00015007679 ENSNFUG00015007691 ENSNFUG00015007720 ENSNFUG00015007721 ENSNFUG00015007726 ENSNFUG00015007728 ENSNFUG00015007735 ENSNFUG00015007739 zeb2a (ENSNFUG00015007743) ##22 ENSNFUG00015007851 ENSNFUG00015009003 aoc1 (ENSNFUG00015009046) ENSNFUG00015009069 ENSNFUG00015009082 ENSNFUG00015009095 BAMBIA (ENSNFUG00015009648) ENSNFUG00015009663 lancl2 (ENSNFUG00015009679) VOPP1 (ENSNFUG00015009725) ENSNFUG00015009729 HECW1 (ENSNFUG00015009820) ENSNFUG00015010481 ENSNFUG00015010484 U2SURP (ENSNFUG00015010506) Cyprinodontoidei ANCESTRAL SPECIES 13 ENSGT00940000155992.c.a ENSGT00530000063273.b.a.a ENSGT00720000108822 ENSGT00940000153969.b ENSGT00940000165503 ENSGT00940000166532 ENSGT00940000157440.m.a ENSGT00940000166747 ENSGT00940000155324.g.a.b ENSGT00940000155324.g.a.a ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000160560.b.f.b.b.b ENSGT00940000160560.b.f.b.b.a ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00940000154551.b.h.a.a.a ENSGT00940000154551.b.h.b.b.b.a NAME_4 ANCESTRAL SPECIES 81 ENSGT00940000155992.c.a ENSGT00530000063273.b.a.a ENSGT00720000108822 ENSGT00940000153969.b ENSGT00940000165503 ENSGT00940000166532 ENSGT00940000157440.m.a ENSGT00940000166747 ENSGT00940000155324.g.a.b ENSGT00940000155324.g.a.a ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000160560.b.f.b.b.b ENSGT00940000160560.b.f.b.b.a ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00940000154551.b.h.b.b.a ENSGT00940000154551.b.h.b.b.b.a ENSGT01100000263523.A.z.d.g.a ENSGT01100000263532.B.a.a ENSGT01100000263532.B.a.b.b ENSGT01100000263532.B.b ENSGT00940000171516 ENSGT01100000263532.A.a.a.b.b.a.a.a ENSGT01100000263532.A.a.a.a.a.b ENSGT01100000263523.G.a.b.b ENSGT01100000263523.A.z.d.h ENSGT01100000263523.J Mummichog MODERN SPECIES 362 ENSFHEG00000002993 ENSFHEG00000002997 acvr2aa (ENSFHEG00000003022) zeb2a (ENSFHEG00000003043) ##22 gtdc1 (ENSFHEG00000003057) #25 ENSFHEG00000000090 ENSFHEG00000003087 ENSFHEG00000003107 ENSFHEG00000003117 ENSFHEG00000003153 ENSFHEG00000003178 ENSFHEG00000003188 ENSFHEG00000003218 ENSFHEG00000003250 ENSFHEG00000003278 ENSFHEG00000003316 ENSFHEG00000003332 ENSFHEG00000003351 ENSFHEG00000003372 Sheepshead minnow MODERN SPECIES 433 agr1 (ENSCVAG00000006174) traf3ip1 (ENSCVAG00000006250) asb1 (ENSCVAG00000000181) ENSCVAG00000006292 twist2 (ENSCVAG00000006332) hdac4 (ENSCVAG00000006486) LCT (ENSCVAG00000007000) ENSCVAG00000007057 ENSCVAG00000007068 arhgap15 (ENSCVAG00000007082) #27 kif5c (ENSCVAG00000007118) ENSCVAG00000007184 ENSCVAG00000007214 ENSCVAG00000007239 acvr2aa (ENSCVAG00000007298) zeb2a (ENSCVAG00000007330) ##22 gtdc1 (ENSCVAG00000007416) #25 ENSCVAG00000007432 ENSCVAG00000007454 ENSCVAG00000007463 Poeciliinae ANCESTRAL SPECIES 25 ENSGT00940000155992.c.a ENSGT00530000063273.b.a.a ENSGT00720000108822 ENSGT00940000153969.b ENSGT00940000165503 ENSGT00940000166532 ENSGT00940000157440.m.a ENSGT00940000166747 ENSGT00940000155324.g.a.b.a ENSGT00940000155324.g.a.a ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000160560.b.f.b.b.b ENSGT00940000160560.b.f.b.b.a ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00940000154551.b.h.a.a.a ENSGT01030000235294 ENSGT00940000154551.b.h.a.a.b.b ENSGT00940000154551.b.h.b.b.b.a ENSGT01100000263523.A.z.d.g.a ENSGT01100000263532.B.b ENSGT01100000263532.A.a.a.a.b.a.a.a ENSGT01100000263532.A.a.a.b.b.b.a.b ENSGT01100000263532.B.a.b.a ENSGT00940000177542 ENSGT01100000263532.A.b.d ENSGT01100000263532.A.a.b.i ENSGT01100000263532.A.a.a.a.b.a.a.b ENSGT00940000164964.b Poecilia ANCESTRAL SPECIES 13 ENSGT00940000155992.c.a ENSGT00530000063273.b.a.a ENSGT00720000108822 ENSGT00940000153969.b ENSGT00940000165503 ENSGT00940000166532 ENSGT00940000157440.m.a ENSGT00940000155324.g.a.b.a ENSGT00940000155324.g.a.a ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000160560.b.f.b.b.b ENSGT00940000160560.b.f.b.b.a.a.b ENSGT00940000160560.b.f.b.b.a.b ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00940000154551.b.h.a.a.a.d.a ENSGT01030000235294 ENSGT00940000154551.b.h.a.a.b.b ENSGT00940000154551.b.h.b.b.b.a ENSGT01100000263523.A.z.d.g.a ENSGT01100000263532.C.c.b.w.a ENSGT01100000263523.A.z.d.g.b ENSGT01100000263532.B.a.b.a ENSGT00940000177542 ENSGT01100000263532.A.b.d ENSGT01100000263532.A.a.b.i ENSGT01100000263532.A.a.a.a.b.a.a.b ENSGT01100000263532.A.a.a.b.b.a.a.a ENSGT01100000263532.A.a.a.b.b.a.b NAME_6 ANCESTRAL SPECIES 298 ENSGT00940000160560.b.f.b.b.a.b ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00940000154551.b.h.b.b.b.a ENSGT01100000263523.A.z.d.g.a ENSGT01100000263532.C.c.b.w.a ENSGT01100000263532.A.a.a.b.b.a.a.a ENSGT01100000263532.A.a.a.b.b.a.b ENSGT01100000263532.A.a.a.b.b.b.a.a ENSGT01100000263523.D ENSGT01100000263532.C.c.b.x ENSGT00940000156449.b.b ENSGT00940000154551.b.h.a.a.a.d.a.a.b ENSGT01030000235294 ENSGT00940000154551.b.h.a.a.b.b Sailfin molly MODERN SPECIES 1522 ENSPLAG00000017992 acvr2aa (ENSPLAG00000018047) zeb2a (ENSPLAG00000018082) ##22 gtdc1 (ENSPLAG00000018114) #25 Amazon molly MODERN SPECIES 550 tmem163a (ENSPFOG00000016885) ENSPFOG00000016839 ENSPFOG00000016685 LCT (ENSPFOG00000016611) arhgap15 (ENSPFOG00000016569) #27 kif5c (ENSPFOG00000016455) ENSPFOG00000021938 ENSPFOG00000016413 ENSPFOG00000022446 ENSPFOG00000016367 ENSPFOG00000016364 acvr2aa (ENSPFOG00000016327) zeb2a (ENSPFOG00000016296) ##22 gtdc1 (ENSPFOG00000016267) #25 ENSPFOG00000022620 ENSPFOG00000016255 ENSPFOG00000020861 TTN (ENSPFOG00000016019) BMPR2 (ENSPFOG00000015893) ENSPFOG00000015884 ENSPFOG00000023800 ENSPFOG00000024223 Guppy MODERN SPECIES 450 traf3ip1 (ENSPREG00000016667) asb1 (ENSPREG00000016757) ENSPREG00000016778 twist2 (ENSPREG00000016807) hdac4 (ENSPREG00000016847) ENSPREG00000016875 LCT (ENSPREG00000016914) arhgap15 (ENSPREG00000017096) #27 kif5c (ENSPREG00000017123) ENSPREG00000017208 ENSPREG00000017224 ENSPREG00000017243 ENSPREG00000017268 ENSPREG00000017281 acvr2aa (ENSPREG00000017310) zeb2a (ENSPREG00000017347) ##22 gtdc1 (ENSPREG00000017361) #25 ENSPREG00000017379 ENSPREG00000017390 ENSPREG00000017422 ENSPREG00000017458 ENSPREG00000017529 ENSPREG00000017546 ENSPREG00000017579 ENSPREG00000017735 ENSPREG00000017758 ENSPREG00000017822 ENSPREG00000017835 ENSPREG00000017853 ENSPREG00000017866 ENSPREG00000017926 Platyfish MODERN SPECIES 21 traf3ip1 (ENSXMAG00000025470) agr1 (ENSXMAG00000027156) asb1 (ENSXMAG00000002068) ENSXMAG00000027897 twist2 (ENSXMAG00000020062) hdac4 (ENSXMAG00000002072) ENSXMAG00000028159 LCT (ENSXMAG00000002096) LCT (ENSXMAG00000000123) arhgap15 (ENSXMAG00000023083) #27 ENSXMAG00000023444 ENSXMAG00000000083 ENSXMAG00000029117 ENSXMAG00000014360 acvr2aa (ENSXMAG00000002106) zeb2a (ENSXMAG00000002123) ##22 gtdc1 (ENSXMAG00000002131) #25 ENSXMAG00000019771 ENSXMAG00000027550 ENSXMAG00000026684 ENSXMAG00000027574 ENSXMAG00000024927 ENSXMAG00000027704 ENSXMAG00000023600 ENSXMAG00000028664 ENSXMAG00000022825 ENSXMAG00000028616 ENSXMAG00000027903 ENSXMAG00000028731 ENSXMAG00000023366 ENSXMAG00000025163 Oryzias ANCESTRAL SPECIES 75 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00940000157879 ENSGT00390000012914 ENSGT00940000165301.a ENSGT01100000263523.A.z.d.h.w.a ENSGT01100000263532.A.b.c.b ENSGT01100000263532.A.a.a.a.a.a ENSGT01100000263523.I.b ENSGT01100000263523.I.a.a.a.b ENSGT01100000263523.E ENSGT00940000156449.b.b ENSGT01000000214434.B.a.a ENSGT00680000100037 ENSGT00940000155065.xb.a ENSGT00940000154657.A.c Oryzias_b ANCESTRAL SPECIES 118 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00940000157879 ENSGT00390000012914 ENSGT00940000165301.a ENSGT01100000263523.A.z.d.h.w.a ENSGT01100000263532.A.b.c.b ENSGT01100000263532.A.a.a.a.a.a ENSGT01100000263523.I.b ENSGT01100000263523.I.a.a.b ENSGT01100000263523.L.d Javanese ricefish MODERN SPECIES 8 ENSOJAG00000004685 PLCL1 (ENSOJAG00000004658) satb2 (ENSOJAG00000004485) tbccd1 (ENSOJAG00000004328) crygs1 (ENSOJAG00000004187) lcmt2 (ENSOJAG00000004082) rab5b (ENSOJAG00000004045) armc8 (ENSOJAG00000003372) ENSOJAG00000003231 idh1 (ENSOJAG00000003097) ENSOJAG00000003073 AKAP11 (ENSOJAG00000003063) kif5c (ENSOJAG00000002875) ENSOJAG00000002855 ENSOJAG00000002809 zeb2a (ENSOJAG00000002773) ##22 gtdc1 (ENSOJAG00000002753) #25 ENSOJAG00000002656 tp53rk (ENSOJAG00000002627) ENSOJAG00000002617 ENSOJAG00000002610 ENSOJAG00000002596 ENSOJAG00000002527 ENSOJAG00000002482 ACO1 (ENSOJAG00000002137) ENSOJAG00000002008 ENSOJAG00000001985 RAPH1 (ENSOJAG00000019489) crygm3 (ENSOJAG00000019468) ENSOJAG00000019437 ENSOJAG00000019372 Indian medaka MODERN SPECIES 48 zgc:77929 (ENSOMEG00000014405) MRPL21 (ENSOMEG00000014420) ENSOMEG00000014441 cdc6 (ENSOMEG00000014493) CCSAP (ENSOMEG00000014519) ACTA1 (ENSOMEG00000014560) nup133 (ENSOMEG00000014612) taf5l (ENSOMEG00000014627) capn9 (ENSOMEG00000014725) ENSOMEG00000014751 ENSOMEG00000014762 ENSOMEG00000014776 ENSOMEG00000014788 ENSOMEG00000014803 ENSOMEG00000014815 zeb2a (ENSOMEG00000014917) ##22 gtdc1 (ENSOMEG00000014991) #25 ENSOMEG00000015032 ENSOMEG00000015111 tp53rk (ENSOMEG00000015137) ENSOMEG00000015162 Oryzias_a ANCESTRAL SPECIES 97 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00940000157879 ENSGT00390000012914 ENSGT00940000165301.a ENSGT01100000263523.A.z.d.h.w.a ENSGT01100000263532.B.b ENSGT01100000263532.A.a.b.i ENSGT01100000263523.K ENSGT01100000263523.G.a.b.b ENSGT01100000263523.H.a ENSGT01100000263523.I.a.a.a.b ENSGT01100000263523.E ENSGT00940000156449.b.b ENSGT01000000214434.B.a.a ENSGT00680000100037 Japanese Medaka HdrR MODERN SPECIES 13 ENSORLG00000024162 ENSORLG00000024267 ENSORLG00000029063 ENSORLG00000026896 ENSORLG00000022769 ENSORLG00000023577 ENSORLG00000019359 crygm3 (ENSORLG00000019353) ENSORLG00000025010 ENSORLG00000024821 etv5a (ENSORLG00000020852) itgb5 (ENSORLG00000020862) ENSORLG00000022262 ENSORLG00000020867 tnfaip6 (ENSORLG00000018870) ENSORLG00000020157 ##22 gtdc1 (ENSORLG00000020145) #25 ENSORLG00000022014 MYLK (ENSORLG00000020132) tp53rk (ENSORLG00000027986) ENSORLG00000022481 ENSORLG00000023694 ENSORLG00000030355 ENSORLG00000025583 ENSORLG00000025823 ENSORLG00000024835 ENSORLG00000026975 ENSORLG00000029121 ENSORLG00000025067 ENSORLG00000024269 ENSORLG00000028350 Chinese medaka MODERN SPECIES 1128 zeb2a (ENSOSIG00000010015) ##22 MYLK (ENSOSIG00000009990) tp53rk (ENSOSIG00000009989) ENSOSIG00000009987 ENSOSIG00000009986 ENSOSIG00000009984 ENSOSIG00000009983 ENSOSIG00000009982 ENSOSIG00000009980 ENSOSIG00000022392 ENSOSIG00000022388 ENSOSIG00000022381 ENSOSIG00000022369 zgc:172295 (ENSOSIG00000022357) ddx18 (ENSOSIG00000022345) actr3 (ENSOSIG00000022324) Ovalentaria_B ANCESTRAL SPECIES 64 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158539.a ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00940000154551.b.h.b ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.b ENSGT00940000177386 ENSGT01100000263523.G.a.a.d.e.a ENSGT01100000263523.G.a.b.b ENSGT01100000263523.H.a ENSGT01100000263523.J ENSGT01100000263523.I.a.a.b ENSGT01100000263523.E ENSGT01100000263532.C.c.a.a.b Cichlidae ANCESTRAL SPECIES 49 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00940000154551.b.h.b.e.a ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.a.a ENSGT01100000263532.B.a.b ENSGT00940000177542 ENSGT01100000263532.A.b.d ENSGT00940000171516 ENSGT01100000263532.A.b.c.a ENSGT01100000263532.A.a.a.b.b.a.a.a ENSGT01100000263523.B ENSGT01100000263523.G.b ENSGT01100000263523.F ENSGT01100000263532.B.b ENSGT00940000177386 Pseudocrenilabrinae ANCESTRAL SPECIES 15 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00940000154551.b.h.b.e.a ENSGT00940000156449.b.b ENSGT00940000154551.b.h.a.c.b ENSGT01000000215047 ENSGT00940000157879 ENSGT01030000234640.a.b.a.b ENSGT00940000158193 ENSGT00510000047718.d ENSGT00390000011821 ENSGT00940000155131 ENSGT00510000051617 ENSGT00940000158406 ENSGT00970000196894 ENSGT00910000144271.C.a.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 14 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00940000154551.b.h.b.e.a ENSGT01100000263523.I.b ENSGT01100000263523.A.z.d.h ENSGT01100000263523.G.b ENSGT01100000263523.I.a.a.b ENSGT01100000263523.I.a.b ENSGT01100000263532.C.c.a.a.a.e.a ENSGT01100000263532.A.a.b.i ENSGT01000000215574 ENSGT01100000263532.A.a.a.b.b.a.b ENSGT01100000263532.A.a.a.a.b.a.b ENSGT01100000263523.L.d.a ENSGT01100000263523.F ENSGT01100000263532.B.b Haplochromini ANCESTRAL SPECIES 19 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.b ENSGT00940000177386 ENSGT01100000263523.G.b ENSGT01100000263523.I.a.a.b ENSGT01100000263523.I.a.b ENSGT01100000263532.C.c.a.a.a.e.a ENSGT01100000263532.A.a.b.i ENSGT01000000215574 ENSGT01100000263532.A.a.a.b.b.a.b ENSGT01100000263532.A.a.a.a.b.a.b ENSGT01100000263523.L.d.a ENSGT01100000263523.F ENSGT00940000156449.b.b Haplochromini_A ANCESTRAL SPECIES 19 ENSGT00940000158539.a ENSGT00950000182860.a.b.b.h #27 ENSGT00940000154801.p ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT01100000263532.A.a.a.a.b.b ENSGT01100000263532.A.a.a.b.b.a.a.b ENSGT01100000263532.A.a.a.a.a.a ENSGT01100000263532.A.a.a.a.a.b ENSGT00940000156449.b.b ENSGT00940000154551.b.h.a.c.b ENSGT01100000264348.a ENSGT01020000231334.b ENSGT01000000215047 ENSGT00940000157879 ENSGT01030000234640.a.b.a.b ENSGT00940000158193 ENSGT00510000047718.d ENSGT00390000011821 Haplochromini_B DUPLICATION Haplochromini_B ANCESTRAL SPECIES 122 ENSGT00940000158539.a ENSGT00950000182860.a.b.b.h #27 ENSGT00940000154801.p ENSGT00940000157233.d ENSGT00950000183208.A.c.b.c ##22 ENSGT00390000006631 #25 ENSGT01100000263532.A.b.c.b ENSGT01100000263532.A.a.a.a.a.a ENSGT01100000263532.A.a.a.a.a.b ENSGT00990000205261 Zebra mbuna MODERN SPECIES 1098 arhgap15 (ENSMZEG00005006552) #27 ENSMZEG00005006543 kif5c (ENSMZEG00005006494) acvr2aa (ENSMZEG00005006462) ENSMZEG00005006441 zeb2a (ENSMZEG00005006424) ##22 gtdc1 (ENSMZEG00005006406) #25 ENSMZEG00005006391 ENSMZEG00005006366 ENSMZEG00005006347 ENSMZEG00005006335 ENSMZEG00005006313 ENSMZEG00005006296 ENSMZEG00005006288 ENSMZEG00005006241 ENSMZEG00005006213 ENSMZEG00005006187 ENSMZEG00005006133 ENSMZEG00005006111 ENSMZEG00005006016 ENSMZEG00005005983 Eastern happy MODERN SPECIES 7 ENSACLG00000010605 ENSACLG00000010622 ENSACLG00000010632 ENSACLG00000010641 ENSACLG00000010685 ENSACLG00000010701 ENSACLG00000010706 ENSACLG00000010717 ENSACLG00000010727 ENSACLG00000010744 ENSACLG00000010746 ENSACLG00000010803 ENSACLG00000010816 gtdc1 (ENSACLG00000010846) #25 zeb2a (ENSACLG00000010854) ##22 zeb2a (ENSACLG00000010904) ##22 ENSACLG00000010958 acvr2aa (ENSACLG00000010961) ENSACLG00000011003 arhgap15 (ENSACLG00000011050) #27 ENSACLG00000011101 Haplochromini_B ANCESTRAL SPECIES ENSGT00950000183208.A.c.b.d ##22 Eastern happy MODERN SPECIES 7 ENSACLG00000011101 arhgap15 (ENSACLG00000011050) #27 ENSACLG00000011003 acvr2aa (ENSACLG00000010961) ENSACLG00000010958 zeb2a (ENSACLG00000010904) ##22 zeb2a (ENSACLG00000010854) ##22 gtdc1 (ENSACLG00000010846) #25 ENSACLG00000010816 ENSACLG00000010803 ENSACLG00000010746 ENSACLG00000010744 ENSACLG00000010727 ENSACLG00000010717 ENSACLG00000010706 ENSACLG00000010701 ENSACLG00000010685 ENSACLG00000010641 ENSACLG00000010632 ENSACLG00000010622 ENSACLG00000010605 ENSACLG00000010485 P. nyererei MODERN SPECIES 564 zeb2a (ENSPNYG00000023289) ##22 gtdc1 (ENSPNYG00000023296) #25 ENSPNYG00000023299 ENSPNYG00000023302 ENSPNYG00000023306 ENSPNYG00000023309 ENSPNYG00000023317 ENSPNYG00000023324 ENSPNYG00000023329 ENSPNYG00000023334 ENSPNYG00000023338 ENSPNYG00000023344 ENSPNYG00000023347 ENSPNYG00000023348 ENSPNYG00000023349 ENSPNYG00000023351 Burton s mouthbrooder MODERN SPECIES 740 zeb2a (ENSHBUG00000021872) ##22 ENSHBUG00000021891 #25 ENSHBUG00000021913 ENSHBUG00000021928 ENSHBUG00000021936 ENSHBUG00000021951 ENSHBUG00000021961 ENSHBUG00000021974 ENSHBUG00000022030 ENSHBUG00000022055 ENSHBUG00000022072 ENSHBUG00000022085 ENSHBUG00000022098 ENSHBUG00000022115 ENSHBUG00000000680 ENSHBUG00000022224 Lyretail cichlid MODERN SPECIES 350 spoplb (ENSNBRG00000020337) NXPH2 (ENSNBRG00000020368) ugt1b1 (ENSNBRG00000020375) ENSNBRG00000020432 ENSNBRG00000020701 clasp1a (ENSNBRG00000020720) tfcp2l1 (ENSNBRG00000020822) ENSNBRG00000020889 ENSNBRG00000020892 ENSNBRG00000020903 inhbb (ENSNBRG00000020940) slc10a2 (ENSNBRG00000021006) arhgap15 (ENSNBRG00000021025) #27 kif5c (ENSNBRG00000021082) acvr2aa (ENSNBRG00000021123) zeb2a (ENSNBRG00000021148) ##22 gtdc1 (ENSNBRG00000021171) #25 ENSNBRG00000021191 ENSNBRG00000021202 ENSNBRG00000021220 ENSNBRG00000021228 ENSNBRG00000021245 ENSNBRG00000021259 ENSNBRG00000021295 ENSNBRG00000021306 ENSNBRG00000021318 ENSNBRG00000021338 ENSNBRG00000021367 ENSNBRG00000021380 ENSNBRG00000021400 ENSNBRG00000021412 Nile tilapia MODERN SPECIES 7 kif5c (ENSONIG00000005818) ENSONIG00000030111 ENSONIG00000030947 acvr2aa (ENSONIG00000005816) ENSONIG00000035020 zeb2a (ENSONIG00000005810) ##22 gtdc1 (ENSONIG00000005809) #25 ENSONIG00000027193 ENSONIG00000039716 ENSONIG00000031335 ENSONIG00000034619 ENSONIG00000040663 ENSONIG00000035248 ENSONIG00000037741 ENSONIG00000028261 ENSONIG00000029514 ENSONIG00000029278 MYLK (ENSONIG00000005779) BMPR2 (ENSONIG00000005789) ENSONIG00000027862 ENSONIG00000028994 Midas cichlid MODERN SPECIES 53 acvr2aa (ENSACIG00000018108) ENSACIG00000018139 zeb2a (ENSACIG00000018149) ##22 gtdc1 (ENSACIG00000018181) #25 ENSACIG00000018206 ENSACIG00000018219 ENSACIG00000018233 ENSACIG00000018252 ENSACIG00000018313 ENSACIG00000018338 ENSACIG00000018349 ENSACIG00000018360 ENSACIG00000018386 ENSACIG00000018643 ENSACIG00000018690 ENSACIG00000018705 ENSACIG00000018861 ENSACIG00000018898 Pomacentridae ANCESTRAL SPECIES 52 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.e.a.a.a ENSGT00940000154486.b.b.a.b ENSGT00940000155248.wb ENSGT00940000166969.a ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00940000172395 ENSGT01050000244823.d.b.b.a.a.b.b.b ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158539.a ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00390000008158.a ENSGT00940000156523.a ENSGT00940000164584 ENSGT00390000002563.b.a.b ENSGT00940000159279 ENSGT00940000155444 ENSGT00940000166829 ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00940000164443.a.a.a ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 Pomacentridae_A ANCESTRAL SPECIES 108 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.e.a.a.a ENSGT00940000154486.b.b.a.b ENSGT00940000155248.wb ENSGT00940000166969.a ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00940000172395 ENSGT01050000244823.d.b.b.a.a.b.b.b ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158539.a ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00390000008158.a ENSGT00940000156523.a ENSGT00940000164584 ENSGT00390000002563.b.a.b ENSGT00940000159279 ENSGT00940000155444 ENSGT00940000166829 ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00940000164443.a.a.a ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 Amphiprion ANCESTRAL SPECIES 61 ENSGT01050000244823.d.b.b.a.a.b.b.b.d ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158539.a ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00390000008158.a ENSGT00940000156523.a ENSGT00940000164584 ENSGT00390000002563.b.a.b ENSGT00940000159279 ENSGT00940000155444 ENSGT00940000166829 ENSGT00390000018717.b.a.b ENSGT01090000260059.a.b.b.b.b.f.a.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00940000164443.a.a.a ENSGT00940000153859.a ENSGT00940000156336 Clown anemonefish MODERN SPECIES 2095 arhgap15 (ENSAOCG00000011852) #27 kif5c (ENSAOCG00000011944) epc2 (ENSAOCG00000011968) acvr2aa (ENSAOCG00000012026) zeb2a (ENSAOCG00000012099) ##22 gtdc1 (ENSAOCG00000012125) #25 Orange clownfish MODERN SPECIES 3 ndufa10 (ENSAPEG00000015951) ahr2 (ENSAPEG00000016009) ahr1b (ENSAPEG00000016065) ENSAPEG00000016639 ENSAPEG00000016757 ENSAPEG00000016811 TTLL4 (ENSAPEG00000016835) ENSAPEG00000016866 FER1L6 (ENSAPEG00000016918) ENSAPEG00000017109 ENSAPEG00000017160 arhgap15 (ENSAPEG00000017177) #27 ENSAPEG00000017221 epc2 (ENSAPEG00000017295) acvr2aa (ENSAPEG00000017321) zeb2a (ENSAPEG00000017463) ##22 gtdc1 (ENSAPEG00000017531) #25 ENSAPEG00000017574 ENSAPEG00000017597 ENSAPEG00000017606 cox17 (ENSAPEG00000017672) popdc2 (ENSAPEG00000017697) pla1a (ENSAPEG00000017718) hsd3b2 (ENSAPEG00000017764) ENSAPEG00000017926 hao2 (ENSAPEG00000017957) wars2 (ENSAPEG00000018028) ENSAPEG00000018063 tbx15 (ENSAPEG00000018092) ENSAPEG00000018203 wdr3 (ENSAPEG00000018223) Spiny chromis MODERN SPECIES 912 ENSAPOG00000011302 arhgap15 (ENSAPOG00000011313) #27 kif5c (ENSAPOG00000011406) epc2 (ENSAPOG00000011428) acvr2aa (ENSAPOG00000011460) zeb2a (ENSAPOG00000011540) ##22 gtdc1 (ENSAPOG00000011597) #25 Bicolor damselfish MODERN SPECIES 660 wdr33 (ENSSPAG00000022727) sft2d3 (ENSSPAG00000022722) ENSSPAG00000022720 rpp40 (ENSSPAG00000022716) riok1 (ENSSPAG00000022710) IMPA1 (ENSSPAG00000022705) impa1 (ENSSPAG00000022671) ENSSPAG00000022664 ENSSPAG00000022661 arhgap15 (ENSSPAG00000022659) #27 ENSSPAG00000022656 kif5c (ENSSPAG00000022645) ENSSPAG00000022641 acvr2aa (ENSSPAG00000022631) zeb2a (ENSSPAG00000022606) ##22 gtdc1 (ENSSPAG00000022590) #25 ENSSPAG00000022582 cox17 (ENSSPAG00000022579) popdc2 (ENSSPAG00000022574) Percomorphaceae_C ANCESTRAL SPECIES 13 ENSGT00940000181338 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158539.a ENSGT00940000158526 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.b ENSGT01100000263532.A.a.a.b.b.a.a.a ENSGT01100000263532.A.a.a.b.b.a.b ENSGT01100000263532.A.a.a.a.b.a.b ENSGT01100000263523.K ENSGT01100000263523.B ENSGT01100000263532.A.a.a.b.b.b ENSGT01100000263532.A.a.a.a.b.b ENSGT01100000263523.G.a.a.d ENSGT01100000263523.G.a.b.b ENSGT01100000263523.H.a ENSGT01100000263523.J ENSGT01100000263523.I.b Percomorphaceae_D ANCESTRAL SPECIES 12 ENSGT00940000181338 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158539.a ENSGT00940000158526 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.a.a ENSGT01100000263532.A.a.b.h.a ENSGT01100000263523.A.y.b ENSGT01100000263532.B.b ENSGT00940000171516 ENSGT01100000263532.A.b.c.b ENSGT01100000263532.A.a.a.b.b.a.a.a ENSGT01100000263532.A.a.a.b.b.a.a.b ENSGT01100000263532.A.a.a.b.b.a.b ENSGT01100000263532.A.a.a.b.b.b ENSGT01100000263523.G.a.a.d ENSGT01100000263523.G.a.b.b ENSGT01100000263523.H.a Anabantaria ANCESTRAL SPECIES 26 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00940000156449.b.b ENSGT00940000157879 ENSGT00940000158193 ENSGT00510000047718.d ENSGT00940000164964.b ENSGT00940000164697.a ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.a.a ENSGT01100000263532.A.a.b.h.a ENSGT00390000006788.a.b ENSGT00390000000693 ENSGT00390000008796 ENSGT00940000164835 ENSGT00390000017619 Anabantoidei ANCESTRAL SPECIES 13 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT01100000263523.A.y.b ENSGT01100000263532.B.b ENSGT01100000263532.A.a.a.b.b.b ENSGT01100000263523.G.a.b.b ENSGT01100000263523.H.a ENSGT01100000263523.J ENSGT01100000263523.I.a.a.b ENSGT00940000156449.b.b ENSGT00940000157879 ENSGT00940000158193 ENSGT00510000047718.d ENSGT00940000164964.b ENSGT00390000006788.a.b ENSGT00390000000693 Climbing perch MODERN SPECIES 12 ENSATEG00000010887 #27 ENSATEG00000011018 ENSATEG00000011118 epc2 (ENSATEG00000011123) acvr2aa (ENSATEG00000011135) ENSATEG00000027131 zeb2a (ENSATEG00000011183) ##22 gtdc1 (ENSATEG00000011230) #25 ENSATEG00000011291 ENSATEG00000011347 ENSATEG00000028836 ENSATEG00000026768 ENSATEG00000011651 ENSATEG00000029529 ENSATEG00000026206 ENSATEG00000027866 ENSATEG00000029828 ENSATEG00000012111 ENSATEG00000012041 ENSATEG00000012295 ENSATEG00000012322 ENSATEG00000012401 Siamese fighting fish MODERN SPECIES 11 ENSBSLG00000024939 #27 kif5c (ENSBSLG00000024974) ENSBSLG00000025058 ENSBSLG00000025060 ENSBSLG00000025063 acvr2aa (ENSBSLG00000025423) zeb2a (ENSBSLG00000025482) ##22 gtdc1 (ENSBSLG00000025496) #25 ENSBSLG00000025506 ENSBSLG00000025512 ENSBSLG00000025517 ENSBSLG00000025520 ENSBSLG00000004874 ENSBSLG00000004905 ENSBSLG00000004999 ENSBSLG00000005029 ENSBSLG00000005170 ube2g2 (ENSBSLG00000005802) TSPEAR (ENSBSLG00000006302) ENSBSLG00000006335 ENSBSLG00000006438 ENSBSLG00000006583 Zig-zag eel MODERN SPECIES 13 ENSMAMG00000016310 ENSMAMG00000016559 ENSMAMG00000016592 ENSMAMG00000016624 ENSMAMG00000016639 ENSMAMG00000016649 ENSMAMG00000016686 ENSMAMG00000016697 ENSMAMG00000016715 ENSMAMG00000016748 ENSMAMG00000025950 ENSMAMG00000016778 #27 ENSMAMG00000016803 epc2 (ENSMAMG00000016848) acvr2aa (ENSMAMG00000016853) zeb2a (ENSMAMG00000016877) ##22 gtdc1 (ENSMAMG00000016907) #25 ENSMAMG00000016929 ENSMAMG00000016941 ENSMAMG00000028563 ENSMAMG00000025644 ENSMAMG00000016980 ENSMAMG00000025167 ENSMAMG00000024925 ENSMAMG00000017041 ENSMAMG00000017068 ENSMAMG00000025864 ENSMAMG00000026810 ENSMAMG00000027011 ENSMAMG00000027362 ENSMAMG00000017367 Carangaria ANCESTRAL SPECIES 12 ENSGT00940000181338 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158539.a ENSGT00940000158526 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00390000013916 ENSGT00940000156449.b.b ENSGT00940000157879 ENSGT01030000234640.a.b.a.b ENSGT00940000158193 ENSGT00510000047718.d ENSGT00980000199010 ENSGT00940000177504 ENSGT01100000263523.J ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.b ENSGT00940000171516 ENSGT01100000263532.A.b.c.b ENSGT01100000263532.A.a.a.b.b.a.a.a Carangaria_A ANCESTRAL SPECIES 99 ENSGT00940000181338 ENSGT00950000182860.a.b.b.f #27 ENSGT00940000154801.p ENSGT00940000158539.a ENSGT00940000158526 ENSGT00940000160560.b.f.b.b.c ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00980000199321 ENSGT01100000263532.A.a.a.a.a.a ENSGT01100000263523.I.a.a.a.a.a ENSGT01100000263523.G.a.a.c.b ENSGT01100000263523.F ENSGT01100000263523.I.a.a.b ENSGT01100000263532.C.c.a.a.a Seriola ANCESTRAL SPECIES 188 ENSGT00950000182860.a.b.b.f #27 ENSGT00940000154801.p ENSGT00940000158526 ENSGT00940000160560.b.f.b.b.c ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 Yellowtail amberjack MODERN SPECIES 2795 arhgap15 (ENSSLDG00000004250) #27 kif5c (ENSSLDG00000004366) ENSSLDG00000004488 ENSSLDG00000004514 acvr2aa (ENSSLDG00000004553) ENSSLDG00000004603 zeb2a (ENSSLDG00000004632) ##22 gtdc1 (ENSSLDG00000004677) #25 ENSSLDG00000004713 Greater amberjack MODERN SPECIES 92 zgc:163073 (ENSSDUG00000004911) arhgap15 (ENSSDUG00000004831) #27 kif5c (ENSSDUG00000004771) epc2 (ENSSDUG00000004728) ENSSDUG00000004704 acvr2aa (ENSSDUG00000004662) zeb2a (ENSSDUG00000004593) ##22 gtdc1 (ENSSDUG00000004537) #25 ENSSDUG00000004518 ENSSDUG00000004491 ENSSDUG00000004457 ENSSDUG00000004444 ENSSDUG00000004413 ENSSDUG00000004395 ENSSDUG00000004335 ENSSDUG00000004291 ENSSDUG00000004203 ENSSDUG00000004140 ENSSDUG00000004122 ENSSDUG00000004110 ENSSDUG00000004071 ENSSDUG00000004028 Barramundi perch MODERN SPECIES 357 acvr2aa (ENSLCAG00010003568) zeb2a (ENSLCAG00010003563) ##22 gtdc1 (ENSLCAG00010003559) #25 ENSLCAG00010003556 ENSLCAG00010003555 ENSLCAG00010003522 ENSLCAG00010003514 ENSLCAG00010003509 ENSLCAG00010003506 ENSLCAG00010003503 ENSLCAG00010003483 ENSLCAG00010003416 ENSLCAG00010003409 ENSLCAG00010003381 ENSLCAG00010003365 ENSLCAG00010003350 ENSLCAG00010003347 Pleuronectoidei ANCESTRAL SPECIES 9 ENSGT00940000159862.a ENSGT00940000165735 ENSGT00950000182808.a.a.a.a.a ENSGT00390000001083 ENSGT00940000155868.f ENSGT00730000111249 ENSGT00390000015050.`b.a ENSGT00940000157541.f.d ENSGT00530000063686.a.a ENSGT00940000160205 ENSGT01090000259987.a.a.a.p ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT01040000241217 ENSGT01100000263523.G.a.b.b ENSGT01100000263523.I.a.a.a.b Turbot MODERN SPECIES 5 ENSSMAG00000015651 dnajc10 (ENSSMAG00000015551) frzb (ENSSMAG00000015533) dusp19a (ENSSMAG00000016328) ENSSMAG00000016339 ENSSMAG00000016374 ENSSMAG00000016399 ENSSMAG00000016424 ENSSMAG00000016457 ENSSMAG00000036960 ENSSMAG00000016584 ENSSMAG00000016626 #27 ENSSMAG00000016646 epc2 (ENSSMAG00000016721) acvr2aa (ENSSMAG00000016733) zeb2a (ENSSMAG00000014179) ##22 gtdc1 (ENSSMAG00000014199) #25 ENSSMAG00000014212 ENSSMAG00000026492 ENSSMAG00000014298 ENSSMAG00000014333 ENSSMAG00000029446 ENSSMAG00000014368 ENSSMAG00000014512 ENSSMAG00000021769 ENSSMAG00000014714 ENSSMAG00000014731 ENSSMAG00000014802 ENSSMAG00000014826 ENSSMAG00000014840 ENSSMAG00000014866 Eupercaria ANCESTRAL SPECIES 18 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158526 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631.d #25 ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.a.a ENSGT00940000177542 ENSGT01100000263532.A.b.d ENSGT01100000263532.A.a.a.b.b.a.a.b ENSGT00980000199321 ENSGT01100000263532.A.a.a.a.a.a ENSGT01100000263523.G.a.b.b ENSGT01100000263523.H.a ENSGT01100000263523.J ENSGT01100000263523.I.b ENSGT01100000263523.I.a.a.b ENSGT01100000263523.E ENSGT01100000263532.B.b Tetraodontidae ANCESTRAL SPECIES 292 ENSGT00940000154801.p ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 Fugu MODERN SPECIES ENSTRUG00000002843 ENSTRUG00000002486 plekhb1 (ENSTRUG00000016952) ENSTRUG00000016948 ENSTRUG00000016942 MPP4 (ENSTRUG00000031911) cnot11 (ENSTRUG00000016939) lcp1 (ENSTRUG00000013955) itm2bb (ENSTRUG00000013964) med4 (ENSTRUG00000014013) sucla2 (ENSTRUG00000014063) ENSTRUG00000032211 esd (ENSTRUG00000029518) kif5c (ENSTRUG00000029212) ENSTRUG00000001801 zeb2a (ENSTRUG00000027167) ##22 Tetraodon MODERN SPECIES 26 ENSTNIG00000005753 ENSTNIG00000005754 sult5a1 (ENSTNIG00000005755) dpep1 (ENSTNIG00000005756) SLC22A31 (ENSTNIG00000005757) ENSTNIG00000005758 ENSTNIG00000005762 kcnk5a (ENSTNIG00000000311) ENSTNIG00000005763 ENSTNIG00000005767 PHB2 (ENSTNIG00000005768) ENSTNIG00000005769 ENSTNIG00000005789 ddx19b (ENSTNIG00000005790) ENSTNIG00000005792 zeb2a (ENSTNIG00000005793) ##22 zgc:153896 (ENSTNIG00000000376) cmtm7 (ENSTNIG00000000085) ENSTNIG00000005794 ENSTNIG00000005795 ENSTNIG00000005796 ENSTNIG00000000975 ENSTNIG00000005799 fars2 (ENSTNIG00000005800) cyb5a (ENSTNIG00000005801) ENSTNIG00000005802 dipk1c (ENSTNIG00000013516) cpt2 (ENSTNIG00000010804) ENSTNIG00000005805 TBC1D22B (ENSTNIG00000005806) COG1 (ENSTNIG00000005808) Eupecaria_A ANCESTRAL SPECIES 18 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158526 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d.d.b ENSGT00940000157233.d.d.a ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631.d #25 ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.a.a ENSGT00940000177542 ENSGT01100000263532.A.b.d ENSGT01100000263532.A.a.a.b.b.a.a.b ENSGT00980000199321 ENSGT01100000263532.A.a.a.b.b.a.a.a ENSGT01100000263532.A.a.a.a.a.b ENSGT01100000263532.A.a.a.a.a.a ENSGT01100000263523.G.a.b.b ENSGT01100000263523.H.a ENSGT01100000263523.J ENSGT01100000263523.C.a.b ENSGT01100000263523.I.b Ballan wrasse MODERN SPECIES 157 zeb2a (ENSLBEG00000001366) ##22 gtdc1 (ENSLBEG00000001335) #25 acvr2aa (ENSLBEG00000001277) ENSLBEG00000001241 kif5c (ENSLBEG00000001127) arhgap15 (ENSLBEG00000001058) #27 ENSLBEG00000001033 gmppaa (ENSLBEG00000001003) pnkd (ENSLBEG00000000985) ENSLBEG00000000971 dars1 (ENSLBEG00000000879) cxcr4a (ENSLBEG00000000869) asic4a (ENSLBEG00000000829) CHPF (ENSLBEG00000000783) pdxka (ENSLBEG00000000742) agpat3 (ENSLBEG00000000684) Eupecaria_B ANCESTRAL SPECIES 18 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158526 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d.d.b.b ENSGT00940000157233.d.d.a ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631.d #25 ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.a.a ENSGT00940000177542 ENSGT01100000263532.A.b.d ENSGT01100000263532.A.a.a.b.b.a.a.b ENSGT00980000199321 ENSGT00940000169215 ENSGT01100000263532.A.b.c.a ENSGT01000000215574 ENSGT01100000263532.A.a.a.b.b.a.b ENSGT01100000263532.A.a.a.b.b.b ENSGT01100000263532.A.a.a.a.b.a.b ENSGT01100000263532.A.a.a.a.b.b ENSGT01100000263523.G.a.a.d Perciformes ANCESTRAL SPECIES 20 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158526.u.a ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d.d.a ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631.d #25 ENSGT00940000164697.a ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.b ENSGT01100000263532.A.a.a.b.b.a.a.a ENSGT01100000263532.A.a.a.a.a.b ENSGT01100000263532.A.a.a.a.a.a ENSGT01100000263532.C.c.b ENSGT00940000156449.b.b ENSGT00940000157879 ENSGT00940000158193 ENSGT00510000047718.d ENSGT00980000199010 ENSGT01100000263532.A.a.a.a.b.b ENSGT01100000263532.C.c.a.a.a Perciformes_a ANCESTRAL SPECIES 132 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631.d #25 ENSGT01100000263523.I.b ENSGT01100000263523.I.a.a.b ENSGT00940000156449.b.b Channel bull blenny MODERN SPECIES 77 zeb2a (ENSCGOG00000018680) ##22 gtdc1 (ENSCGOG00000018685) #25 ENSCGOG00000018709 ENSCGOG00000018710 ENSCGOG00000018724 ENSCGOG00000018729 ENSCGOG00000018734 ENSCGOG00000018738 ENSCGOG00000018743 BMPR2 (ENSCGOG00000018745) ENSCGOG00000018747 ENSCGOG00000018749 kif5c (ENSCGOG00000018786) arhgap15 (ENSCGOG00000019888) #27 Pike perch MODERN SPECIES 407 zeb2a (ENSSLUG00000004368) ##22 gtdc1 (ENSSLUG00000004351) #25 Cottioidei ANCESTRAL SPECIES 14 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158526.u.a ENSGT00940000157233.d.d.a ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631.d #25 ENSGT01100000263523.I.a.a.b ENSGT00940000156449.b.b ENSGT00940000157879 ENSGT00940000158193 ENSGT00510000047718.d ENSGT00980000199010 ENSGT01100000263523.A.z.d.h ENSGT01100000263532.B.b ENSGT01100000263532.B.a.a ENSGT00940000169215 ENSGT01100000263532.A.a.b.i ENSGT01100000263523.G.b ENSGT01100000263523.F ENSGT00390000006788.a.b Lumpfish MODERN SPECIES 13 popdc2 (ENSCLMG00005015284) cox17 (ENSCLMG00005015281) ENSCLMG00005015280 ENSCLMG00005015278 ENSCLMG00005015277 ENSCLMG00005015276 lats2 (ENSCLMG00005015266) xpo4 (ENSCLMG00005015250) eef1akmt1 (ENSCLMG00005015249) ENSCLMG00005015248 arhgap15 (ENSCLMG00005015246) #27 ENSCLMG00005015030 ENSCLMG00005015014 ENSCLMG00005015010 acvr2aa (ENSCLMG00005014788) zeb2a (ENSCLMG00005014673) ##22 gtdc1 (ENSCLMG00005014668) #25 ENSCLMG00005014666 ENSCLMG00005014664 ENSCLMG00005014661 ENSCLMG00005014653 ENSCLMG00005014647 ENSCLMG00005014642 ENSCLMG00005014641 ENSCLMG00005014640 ENSCLMG00005014636 MYLK (ENSCLMG00005014428) ube2g2 (ENSCLMG00005014423) TSPEAR (ENSCLMG00005014415) ENSCLMG00005014413 ENSCLMG00005014410 Stickleback MODERN SPECIES 517 kif5c (ENSGACG00000000317) epc2 (ENSGACG00000000311) zeb2a (ENSGACG00000000310) ##22 gtdc1 (ENSGACG00000000306) #25 ENSGACG00000000305 ENSGACG00000000301 ENSGACG00000000300 ENSGACG00000000299 ENSGACG00000000294 ube2g2 (ENSGACG00000000291) TSPEAR (ENSGACG00000000289) TTN (ENSGACG00000000274) ENSGACG00000000272 ENSGACG00000000271 ENSGACG00000000269 LMLN (ENSGACG00000000265) ENSGACG00000000264 itgav (ENSGACG00000000260) Eupecaria_C ANCESTRAL SPECIES 61 ENSGT00950000182860.a.b.b #27 ENSGT00940000154801.p ENSGT00940000158526 ENSGT00940000160560.b.f.b.b ENSGT00940000157233.d.d.b.b ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631.d #25 ENSGT00390000013916 ENSGT00940000156449.b.b ENSGT00940000157879 ENSGT01030000234640.a.b.a.b ENSGT00940000158193 ENSGT00510000047718.d Gilthead seabream MODERN SPECIES 23 ENSSAUG00010002554 ENSSAUG00010002563 ENSSAUG00010002599 ENSSAUG00010002611 ENSSAUG00010002615 arhgap15 (ENSSAUG00010002635) #27 kif5c (ENSSAUG00010002744) epc2 (ENSSAUG00010003933) ENSSAUG00010003935 ENSSAUG00010003937 ENSSAUG00010003941 acvr2aa (ENSSAUG00010003953) ENSSAUG00010004066 ENSSAUG00010004099 acvr2aa (ENSSAUG00010004257) zeb2a (ENSSAUG00010005690) ##22 ENSSAUG00010006099 gtdc1 (ENSSAUG00010006102) #25 ENSSAUG00010006105 ENSSAUG00010006106 MYLK (ENSSAUG00010006112) BMPR2 (ENSSAUG00010006127) ENSSAUG00010006129 ENSSAUG00010006136 ENSSAUG00010006145 ENSSAUG00010006153 ENSSAUG00010006161 ENSSAUG00010006167 ENSSAUG00010001299 ENSSAUG00010001300 ENSSAUG00010001312 Eupercaria_incertae_sedis ANCESTRAL SPECIES 100 ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631.d #25 ENSGT00390000013916 ENSGT00940000156449.b.b ENSGT00940000157879 ENSGT01030000234640.a.b.a.b ENSGT00940000158193 ENSGT00510000047718.d Large yellow croaker MODERN SPECIES 35 ENSLCRG00005001649 zeb2a (ENSLCRG00005001572) ##22 gtdc1 (ENSLCRG00005001527) #25 ENSLCRG00005001512 ENSLCRG00005001458 ENSLCRG00005001437 ENSLCRG00005001425 ENSLCRG00005019812 ENSLCRG00005019803 ENSLCRG00005019796 ENSLCRG00005019782 ENSLCRG00005019765 ENSLCRG00005019463 esd (ENSLCRG00005019361) ENSLCRG00005019352 ENSLCRG00005019344 ENSLCRG00005019321 European seabass MODERN SPECIES 5 ENSDLAG00005033256 ENSDLAG00005034528 ENSDLAG00005034461 ENSDLAG00005032473 ENSDLAG00005028770 ENSDLAG00005033751 ENSDLAG00005027393 ENSDLAG00005002660 ENSDLAG00005012879 ENSDLAG00005010021 acvr2aa (ENSDLAG00005035127) ENSDLAG00005032804 ENSDLAG00005027247 ENSDLAG00005030116 ENSDLAG00005027861 ENSDLAG00005030900 ##22 gtdc1 (ENSDLAG00005034668) #25 ENSDLAG00005033132 #27 ENSDLAG00005030504 ENSDLAG00005006373 ENSDLAG00005031233 ENSDLAG00005031424 ENSDLAG00005026364 ENSDLAG00005026539 ENSDLAG00005003426 ENSDLAG00005003151 ENSDLAG00005026523 ENSDLAG00005031736 ENSDLAG00005027852 ENSDLAG00005010928 ENSDLAG00005033694 Pinecone sodierfish MODERN SPECIES 13 R3HDM1 (ENSMMDG00005011316) UBXN4 (ENSMMDG00005011306) ENSMMDG00005011302 ENSMMDG00005011298 rnd3b (ENSMMDG00005011291) rnd3b (ENSMMDG00005011278) mmadhcb (ENSMMDG00005011275) LYPD6 (ENSMMDG00005011272) lypd6b (ENSMMDG00005011268) ENSMMDG00005011265 ENSMMDG00005011260 ENSMMDG00005011255 KIF5C (ENSMMDG00005011244) epc2 (ENSMMDG00005011233) acvr2aa (ENSMMDG00005011102) zeb2a (ENSMMDG00005011016) ##22 gtdc1 (ENSMMDG00005011009) #25 ENSMMDG00005011004 arhgap15 (ENSMMDG00005010999) #27 ENSMMDG00005010997 Cod MODERN SPECIES 12 ENSGMOG00000023772 ENSGMOG00000028916 ENSGMOG00000034621 ENSGMOG00000011217 ENSGMOG00000011231 ENSGMOG00000011207 RND3 (ENSGMOG00000011197) rnd3b (ENSGMOG00000026348) MMADHC (ENSGMOG00000011181) LYPD6 (ENSGMOG00000034422) LYPD6B (ENSGMOG00000025667) KIF5C (ENSGMOG00000011375) epc2 (ENSGMOG00000013936) ENSGMOG00000013896 acvr2aa (ENSGMOG00000036028) zeb2a (ENSGMOG00000028351) ##22 gtdc1 (ENSGMOG00000010251) #25 arhgap15 (ENSGMOG00000012779) #27 ENSGMOG00000025469 ENSGMOG00000001873 ENSGMOG00000027698 ENSGMOG00000001883 ENSGMOG00000004804 ENSGMOG00000036567 ENSGMOG00000035329 ENSGMOG00000027009 ENSGMOG00000034119 ENSGMOG00000033606 ENSGMOG00000002328 ENSGMOG00000002379 ENSGMOG00000002399 Protacanthopterygii ANCESTRAL SPECIES 18 ENSGT01030000234607.A.a.a.a.d ENSGT00390000006705 ENSGT00940000156095.m.b ENSGT00940000160205 ENSGT00940000165390.a ENSGT00940000154311.b ENSGT00530000063686.a.a ENSGT00940000157541.f.c ENSGT00940000157541.f.d ENSGT00390000015050.`b.a ENSGT00390000000220.B.c.b ENSGT00390000000220.A ENSGT00940000158539.a.e ENSGT00940000158526 ENSGT00940000157233.d ENSGT00950000183208.A.c.b ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b #27 ENSGT00940000160639.b.a.b.b.b ENSGT00390000013151.a.a.b ENSGT00940000160532.h ENSGT00510000049102 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b.e.a.a.a ENSGT00940000154486.b.b.a.b ENSGT00940000162556.A.b ENSGT00390000003874.a.a ENSGT00940000158589.b.a ENSGT01050000244897.a.b.b.a.a ENSGT00940000156856.c ENSGT00940000162795 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 7 ENSGT00940000160383 ENSGT01030000234607.A.a.a.a.d ENSGT00390000006705.g ENSGT00940000156095.m.b.a ENSGT00940000160205.c ENSGT00940000165390.a.k ENSGT00940000157541.f.c.b ENSGT00940000157541.f.d.c ENSGT00390000015050.`b.a.e ENSGT00390000000220.B.c.b.a ENSGT00390000000220.A.c ENSGT00940000158539.a.e ENSGT00940000158526.s ENSGT00530000064137.a.b.u.a ENSGT00940000157233.d.g ENSGT00950000183208.A.c.b.e ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b.c #27 ENSGT00940000160639.b.a.b.b.b.a ENSGT00390000013151.a.a.b.c ENSGT00940000160532.h.c.b ENSGT00940000160532.h.c.a ENSGT00390000016151.g ENSGT00940000154486.b.a.a.b.e.a.a.a.d ENSGT00940000154486.b.b.a.b.b ENSGT00940000162556.A.b ENSGT01090000259985.b.a.a.a ENSGT00950000182836.b.b.b.a.k.a ENSGT00390000003874.a.a.b ENSGT00940000158449.f ENSGT00940000158589.b.a Salmoninae_a ANCESTRAL SPECIES ENSGT00940000160383 ENSGT01030000234607.A.a.a.a.d ENSGT00390000006705.g ENSGT00940000156095.m.b.a ENSGT00940000160205.c ENSGT00940000165390.a.k ENSGT00940000157541.f.c.b ENSGT00940000157541.f.d.c ENSGT00390000015050.`b.a.e ENSGT00390000000220.B.c.b.a ENSGT00390000000220.A.c ENSGT00940000158539.a.e ENSGT00940000158526.s ENSGT00530000064137.a.b.u.a ENSGT00940000157233.d.g ENSGT00950000183208.A.c.b.e ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b.c #27 ENSGT00940000160639.b.a.b.b.b.a ENSGT00390000013151.a.a.b.c ENSGT00940000160532.h.c.b ENSGT00940000160532.h.c.a ENSGT00390000016151.g ENSGT00940000154486.b.a.a.b.e.a.a.a.d ENSGT00940000154486.b.b.a.b.b ENSGT00940000162556.A.b ENSGT01090000259985.b.a.a.a ENSGT00950000182836.b.b.b.a.k.a ENSGT00390000003874.a.a.b ENSGT00940000158449.f ENSGT00940000158589.b.a Salmo ANCESTRAL SPECIES 15 ENSGT00940000160383 ENSGT01030000234607.A.a.a.a.d ENSGT00390000006705.g ENSGT00940000156095.m.b.a ENSGT00940000160205.c ENSGT00940000165390.a.k ENSGT00940000157541.f.c.b ENSGT00940000157541.f.d.c ENSGT00390000015050.`b.a.e ENSGT00390000000220.B.c.b.a ENSGT00390000000220.A.c ENSGT00940000158539.a.e ENSGT00940000158526.s ENSGT00530000064137.a.b.u.a ENSGT00940000157233.d.g ENSGT00950000183208.A.c.b.e ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b.c #27 ENSGT00940000160639.b.a.b.b.b.a ENSGT00390000013151.a.a.b.c ENSGT00940000160532.h.c.b ENSGT00940000160532.h.c.a ENSGT00390000016151.g ENSGT00940000154486.b.a.a.b.e.a.a.a.d ENSGT00940000154486.b.b.a.b.b ENSGT00940000162556.A.b ENSGT01090000259985.b.a.a.a.i ENSGT00950000182836.b.b.b.a.k.a ENSGT00390000003874.a.a.b ENSGT00940000158449.f ENSGT00940000158589.b.a Atlantic salmon MODERN SPECIES 17 ENSSSAG00000046447 ccnt2a (ENSSSAG00000046498) ENSSSAG00000046434 RAB3GAP1 (ENSSSAG00000046103) R3HDM1 (ENSSSAG00000045633) UBXN4 (ENSSSAG00000113024) ENSSSAG00000081672 RND3 (ENSSSAG00000120060) ENSSSAG00000113399 CB025 (ENSSSAG00000081667) LYPD6 (ENSSSAG00000106558) KIF5C (ENSSSAG00000081647) epc2 (ENSSSAG00000081641) MBD5 (ENSSSAG00000081639) acvr2aa (ENSSSAG00000081630) zeb2a (ENSSSAG00000081619) ##22 gtdc1 (ENSSSAG00000081613) #25 RHG15 (ENSSSAG00000081610) #27 adprh (ENSSSAG00000081606) ENSSSAG00000102975 ENSSSAG00000109819 sh3bp4 (ENSSSAG00000081600) ENSSSAG00000069294 ENSSSAG00000081555 ENSSSAG00000081497 ndufa10 (ENSSSAG00000081486) ENSSSAG00000081485 ENSSSAG00000081482 ENSSSAG00000081481 ENSSSAG00000081479 ENSSSAG00000081480 River trout MODERN SPECIES 16 ENSSTUG00000009678 ENSSTUG00000009662 rab3gap1 (ENSSTUG00000007748) R3HDM1 (ENSSTUG00000007546) UBXN4 (ENSSTUG00000007495) ENSSTUG00000007463 RND3 (ENSSTUG00000007449) rnd3b (ENSSTUG00000007411) mmadhcb (ENSSTUG00000007371) LYPD6 (ENSSTUG00000007362) lypd6b (ENSSTUG00000007354) KIF5C (ENSSTUG00000006973) epc2 (ENSSTUG00000006897) MBD5 (ENSSTUG00000006873) acvr2aa (ENSSTUG00000006425) zeb2a (ENSSTUG00000006336) ##22 gtdc1 (ENSSTUG00000006293) #25 arhgap15 (ENSSTUG00000006192) #27 ADPRH (ENSSTUG00000006167) ARL4C (ENSSTUG00000006163) sh3bp4 (ENSSTUG00000006143) ENSSTUG00000003287 ENSSTUG00000050934 ndufa10 (ENSSTUG00000050924) ENSSTUG00000050919 ENSSTUG00000050869 ENSSTUG00000050863 ENSSTUG00000050861 ENSSTUG00000050858 ENSSTUG00000050857 ENSSTUG00000050856 Oncorhynchus ANCESTRAL SPECIES 3 ENSGT01030000234607.A.a.a.a.d ENSGT00390000006705.g ENSGT00940000156095.m.b.a ENSGT00940000160205.c ENSGT00940000165390.a.k ENSGT01010000222294.c.b.b.b.c.a.a.b.a.a ENSGT00940000157541.f.c.b ENSGT00940000157541.f.d.c ENSGT00390000015050.`b.a.e ENSGT00390000000220.B.c.b.a ENSGT00390000000220.A.c ENSGT00940000158539.a.e ENSGT00940000158526.s ENSGT00530000064137.a.b.u.a ENSGT00940000157233.d.g ENSGT00950000183208.A.c.b.e ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b.c #27 ENSGT00940000160639.b.a.b.b.b.a ENSGT00390000013151.a.a.b.c ENSGT00940000160532.h.c.b ENSGT00940000160532.h.c.a ENSGT00390000016151.g ENSGT00940000154486.b.a.a.b.e.a.a.a.d ENSGT00940000154486.b.b.a.b.b ENSGT00940000162556.A.b ENSGT01090000259985.b.a.a.a ENSGT00950000182836.b.b.b.a.k.a ENSGT00390000003874.a.a.b ENSGT00940000158449.f ENSGT00940000158589.b.a Oncorhynchus_a ANCESTRAL SPECIES 8 ENSGT01030000234607.A.a.a.a.d.a ENSGT00390000006705.g ENSGT00940000156095.m.b.a ENSGT00940000160205.c ENSGT00940000165390.a.k ENSGT01010000222294.c.b.b.b.c.a.a.b.a.a ENSGT00940000157541.f.c.b ENSGT00940000157541.f.d.c ENSGT00390000015050.`b.a.e ENSGT00390000000220.B.c.b.a ENSGT00390000000220.A.c ENSGT00940000158539.a.e ENSGT00940000158526.s ENSGT00530000064137.a.b.u.a ENSGT00940000157233.d.g ENSGT00950000183208.A.c.b.e ##22 ENSGT00390000006631 #25 ENSGT00950000182860.a.b.b.c #27 ENSGT00940000160639.b.a.b.b.b.a ENSGT00390000013151.a.a.b.c ENSGT00940000160532.h.c.b ENSGT00940000160532.h.c.a ENSGT00390000016151.g ENSGT00940000154486.b.a.a.b.e.a.a.a.d ENSGT00940000154486.b.b.a.b.b ENSGT00940000162556.A.b ENSGT01090000259985.b.a.a.a.g ENSGT01090000259985.b.a.a.a.h ENSGT00950000182836.b.b.b.a.k.a ENSGT00390000003874.a.a.b ENSGT00940000158449.f Coho salmon MODERN SPECIES 11 ENSOKIG00005048220 rab3gap1 (ENSOKIG00005047115) R3HDM1 (ENSOKIG00005047043) UBXN4 (ENSOKIG00005047036) ENSOKIG00005047027 ENSOKIG00005047017 rnd3b (ENSOKIG00005047005) rnd3b (ENSOKIG00005046975) mmadhcb (ENSOKIG00005046956) LYPD6 (ENSOKIG00005046950) lypd6b (ENSOKIG00005046945) KIF5C (ENSOKIG00005046928) epc2 (ENSOKIG00005046899) MBD5 (ENSOKIG00005046883) acvr2aa (ENSOKIG00005046477) zeb2a (ENSOKIG00005046434) ##22 gtdc1 (ENSOKIG00005046420) #25 arhgap15 (ENSOKIG00005046394) #27 ADPRH (ENSOKIG00005046379) ARL4C (ENSOKIG00005046372) ENSOKIG00005046369 sh3bp4 (ENSOKIG00005046356) ENSOKIG00005043752 ENSOKIG00005041362 ndufa10 (ENSOKIG00005041173) ENSOKIG00005040875 ENSOKIG00005040376 ENSOKIG00005040348 ENSOKIG00005040287 ENSOKIG00005040088 agpat3 (ENSOKIG00005040043) Chinook salmon MODERN SPECIES 22 tmem163a (ENSOTSG00005014699) ccnt2a (ENSOTSG00005014680) ENSOTSG00005014676 ENSOTSG00005014674 rab3gap1 (ENSOTSG00005011394) R3HDM1 (ENSOTSG00005011386) ubxn4 (ENSOTSG00005011381) RND3 (ENSOTSG00005011379) rnd3b (ENSOTSG00005011378) mmadhcb (ENSOTSG00005011375) LYPD6 (ENSOTSG00005011371) lypd6b (ENSOTSG00005011368) KIF5C (ENSOTSG00005011365) ENSOTSG00005011347 acvr2aa (ENSOTSG00005010288) zeb2a (ENSOTSG00005010263) ##22 gtdc1 (ENSOTSG00005010262) #25 arhgap15 (ENSOTSG00005010259) #27 ADPRH (ENSOTSG00005010248) ARL4C (ENSOTSG00005010246) sh3bp4 (ENSOTSG00005010245) ENSOTSG00005009276 ENSOTSG00005001354 ndufa10 (ENSOTSG00005026790) ENSOTSG00005026789 ENSOTSG00005026787 ENSOTSG00005026786 ENSOTSG00005026785 ENSOTSG00005026784 ENSOTSG00005026783 agpat3 (ENSOTSG00005026782) Rainbow trout MODERN SPECIES 21 RAB3GAP1 (ENSOMYG00000010724) R3HDM1 (ENSOMYG00000006736) UBXN4 (ENSOMYG00000006585) ENSOMYG00000006412 ENSOMYG00000006220 RND3 (ENSOMYG00000006168) rnd3b (ENSOMYG00000006108) MMADHC (ENSOMYG00000006042) LYPD6 (ENSOMYG00000005970) lypd6b (ENSOMYG00000005960) KIF5C (ENSOMYG00000005533) epc2 (ENSOMYG00000004870) MBD5 (ENSOMYG00000004808) acvr2aa (ENSOMYG00000004736) ENSOMYG00000030635 zeb2a (ENSOMYG00000004579) ##22 gtdc1 (ENSOMYG00000004521) #25 arhgap15 (ENSOMYG00000004463) #27 ENSOMYG00000077737 ENSOMYG00000004346 ENSOMYG00000062109 ENSOMYG00000073609 ENSOMYG00000004236 sh3bp4 (ENSOMYG00000004214) ENSOMYG00000002718 ENSOMYG00000000840 ndufa10 (ENSOMYG00000000339) ENSOMYG00000000270 ENSOMYG00000060709 ENSOMYG00000042842 ENSOMYG00000068390 Huchen MODERN SPECIES 87 zeb2a (ENSHHUG00000038427) ##22 gtdc1 (ENSHHUG00000038465) #25 arhgap15 (ENSHHUG00000038482) #27 ADPRH (ENSHHUG00000038499) ARL4C (ENSHHUG00000038510) sh3bp4 (ENSHHUG00000038514) ENSHHUG00000038539 ENSHHUG00000038813 gypc (ENSHHUG00000039177) ENSHHUG00000039200 ndufa10 (ENSHHUG00000039202) ENSHHUG00000039225 ENSHHUG00000039350 ENSHHUG00000039354 Salmoninae ANCESTRAL SPECIES 823 ENSGT00940000157541.f.d.d ENSGT00390000015050.`b.a.f ENSGT00390000000220.B.c.b.b ENSGT00390000000220.A.d ENSGT00940000158539.a.f ENSGT00940000158526.t ENSGT00530000064137.a.b.u.b ENSGT00940000157233.d.h ENSGT00950000183208.A.c.b.f ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000155759.e.a.a ENSGT00390000006705.h ENSGT00940000156095.m.b.b ENSGT00940000160205.d ENSGT00940000165390.a.l ENSGT00940000154311.b ENSGT00530000063686.a.a ENSGT00940000157541.f.c.a ENSGT00940000157541.f.d.d ENSGT00390000015050.`b.a.f ENSGT00390000000220.B.c.b.b ENSGT00390000000220.A.d ENSGT00940000158526.t ENSGT00530000064137.a.b.u.b ENSGT00940000157233.d.h ENSGT00950000183208.A.c.b.f ##22 ENSGT00950000182860.a.b.b.d #27 ENSGT00940000166921.a ENSGT00940000160639.b.a.b.b.b.b ENSGT00390000013151.a.a.b.d ENSGT00530000065251.m.a ENSGT00940000160532.h.d.b ENSGT00950000182977.B.b.b.d ENSGT00940000160532.h.d.a ENSGT00510000049102.c ENSGT00390000016151.h ENSGT00940000154486.b.a.a.b.e.a.a.a.c ENSGT00940000154486.b.b.a.b.a ENSGT01100000263531.G.n ENSGT00950000182836.b.b.b.a.k.b ENSGT00390000003874.a.a.a Salmo ANCESTRAL SPECIES 10 ENSGT00940000155759.e.a.a ENSGT00390000006705.h ENSGT00940000156095.m.b.b ENSGT00940000160205.d ENSGT00940000165390.a.l ENSGT00940000154311.b ENSGT00530000063686.a.a ENSGT00940000157541.f.c.a ENSGT00940000157541.f.d.d ENSGT00390000015050.`b.a.f ENSGT00390000000220.B.c.b.b ENSGT00390000000220.A.d ENSGT00940000158526.t ENSGT00530000064137.a.b.u.b ENSGT00940000157233.d.h ENSGT00950000183208.A.c.b.f ##22 ENSGT00950000182860.a.b.b.d #27 ENSGT00940000166921.a ENSGT00940000160639.b.a.b.b.b.b ENSGT00390000013151.a.a.b.d ENSGT00530000065251.m.a ENSGT00940000160532.h.d.b ENSGT00950000182977.B.b.b.d ENSGT00940000160532.h.d.a ENSGT00390000016151.h ENSGT00940000154486.b.b.a.a ENSGT00990000212594 ENSGT01100000263531.G.n ENSGT00950000182836.b.b.b.a.k.b ENSGT00390000003874.a.a.a ENSGT01050000244897.a.b.b.a.a.e Atlantic salmon MODERN SPECIES 13 RAB3GAP1 (ENSSSAG00000057384) ENSSSAG00000086017 r3hdm1 (ENSSSAG00000057435) ubxn4 (ENSSSAG00000081673) ENSSSAG00000057802 ENSSSAG00000057832 RND3 (ENSSSAG00000057846) rnd3b (ENSSSAG00000057861) MMADHC (ENSSSAG00000057873) LYPD6 (ENSSSAG00000057885) LYPD6B (ENSSSAG00000117020) epc2 (ENSSSAG00000057918) ENSSSAG00000058136 ACVR2A (ENSSSAG00000058221) ENSSSAG00000116492 zeb2a (ENSSSAG00000063282) ##22 ENSSSAG00000104017 ENSSSAG00000121595 ENSSSAG00000097835 rhg15 (ENSSSAG00000063302) #27 ENSSSAG00000063341 ENSSSAG00000114450 ENSSSAG00000063499 ENSSSAG00000114515 ENSSSAG00000063519 ENSSSAG00000063572 clm8 (ENSSSAG00000064734) ENSSSAG00000064864 ENSSSAG00000113592 ENSSSAG00000109411 NDUAA (ENSSSAG00000067928) River trout MODERN SPECIES 12 ENSSTUG00000008815 rab3gap1 (ENSSTUG00000008774) R3HDM1 (ENSSTUG00000008585) UBXN4 (ENSSTUG00000008518) ENSSTUG00000008509 ENSSTUG00000008483 ENSSTUG00000008475 rnd3b (ENSSTUG00000008458) rnd3b (ENSSTUG00000008422) mmadhcb (ENSSTUG00000008410) LYPD6 (ENSSTUG00000008403) lypd6b (ENSSTUG00000008381) epc2 (ENSSTUG00000008327) ENSSTUG00000008313 acvr2aa (ENSSTUG00000007939) zeb2a (ENSSTUG00000007798) ##22 arhgap15 (ENSSTUG00000007723) #27 ENSSTUG00000007661 ARL4C (ENSSTUG00000007658) ENSSTUG00000007651 sh3bp4 (ENSSTUG00000007637) ENSSTUG00000007626 ENSSTUG00000007613 ENSSTUG00000005465 ENSSTUG00000005317 ENSSTUG00000005306 ENSSTUG00000004869 ndufa10 (ENSSTUG00000004793) ENSSTUG00000004780 ENSSTUG00000004201 ENSSTUG00000004131 Oncorhynchus ANCESTRAL SPECIES 13 ENSGT00490000043417.f ENSGT00940000155759.e.a.a ENSGT00390000006705.h ENSGT00940000156095.m.b.b ENSGT00940000160205.d ENSGT00940000165390.a.l ENSGT00530000063686.a.a ENSGT00940000157541.f.c.a ENSGT00940000157541.f.d.d ENSGT00390000015050.`b.a.f ENSGT00390000000220.B.c.b.b ENSGT00390000000220.A.d ENSGT00940000158526.t ENSGT00530000064137.a.b.u.b ENSGT00940000157233.d.h ENSGT00950000183208.A.c.b.f ##22 ENSGT00950000182860.a.b.b.d #27 ENSGT00940000166921.a ENSGT00940000160639.b.a.b.b.b.b.c ENSGT00940000160639.b.a.b.b.b.b.d ENSGT00390000013151.a.a.b.d ENSGT00530000065251.m.a ENSGT00940000160532.h.d.b ENSGT00950000182977.B.b.b.d ENSGT00940000160532.h.d.a ENSGT00510000049102.c ENSGT00390000016151.h ENSGT00940000153510.a.a.b ENSGT00940000154486.b.a.a.b.e.a.a.a.c ENSGT00940000154486.b.b.a.b.a ENSGT01100000263531.G.n Oncorhynchus_a ANCESTRAL SPECIES 11 ENSGT00390000001170.a.a.d.b.a ENSGT00490000043417.f ENSGT00940000155759.e.a.a ENSGT00940000156095.m.b.b ENSGT00940000160205.d ENSGT00940000165390.a.l ENSGT00530000063686.a.a ENSGT00940000157541.f.c.a ENSGT00940000157541.f.d.d ENSGT00390000015050.`b.a.f ENSGT00390000000220.B.c.b.b ENSGT00390000000220.A.d ENSGT00940000158526.t ENSGT00530000064137.a.b.u.b ENSGT00940000157233.d.h ENSGT00950000183208.A.c.b.f ##22 ENSGT00950000182860.a.b.b.d #27 ENSGT00940000166921.a ENSGT00940000160639.b.a.b.b.b.b.c ENSGT00940000160639.b.a.b.b.b.b.d ENSGT00390000013151.a.a.b.d ENSGT00390000015709.c ENSGT00940000156180.e.f ENSGT00390000001225.t.b ENSGT00390000005581.a.f ENSGT01050000244905.A.a.n.a.a ENSGT00940000167649.a ENSGT01050000244905.A.a.n.b ENSGT00390000010463.a.b.c.a.f ENSGT00940000165672.r ENSGT00390000006330.a.a.b.c Chinook salmon MODERN SPECIES 18 R3HDM1 (ENSOTSG00005016395) UBXN4 (ENSOTSG00005016473) ENSOTSG00005016515 NMI (ENSOTSG00005016516) RND3 (ENSOTSG00005016521) rnd3b (ENSOTSG00005016522) mmadhcb (ENSOTSG00005016523) LYPD6 (ENSOTSG00005016524) lypd6b (ENSOTSG00005016525) ENSOTSG00005016567 epc2 (ENSOTSG00005016572) ENSOTSG00005016802 acvr2aa (ENSOTSG00005016807) ENSOTSG00005016852 ENSOTSG00005016853 zeb2a (ENSOTSG00005016854) ##22 arhgap15 (ENSOTSG00005016855) #27 ENSOTSG00005016858 ARL4C (ENSOTSG00005017066) ARL4C (ENSOTSG00005017067) SH3BP4 (ENSOTSG00005017069) ENSOTSG00005017071 ENSOTSG00005017072 ENSOTSG00005017073 CNTNAP5 (ENSOTSG00005017074) ENSOTSG00005017085 ENSOTSG00005017086 ENSOTSG00005017089 ENSOTSG00005017091 ENSOTSG00005017093 ENSOTSG00005017094 Coho salmon MODERN SPECIES 18 acmsd (ENSOKIG00005026186) ccnt2a (ENSOKIG00005026326) R3HDM1 (ENSOKIG00005027587) UBXN4 (ENSOKIG00005027938) ENSOKIG00005028009 NMI (ENSOKIG00005028048) RND3 (ENSOKIG00005028077) rnd3b (ENSOKIG00005028093) MMADHC (ENSOKIG00005028095) LYPD6 (ENSOKIG00005028106) lypd6b (ENSOKIG00005028112) epc2 (ENSOKIG00005028162) ENSOKIG00005029006 acvr2aa (ENSOKIG00005029043) ENSOKIG00005029214 zeb2a (ENSOKIG00005029225) ##22 ENSOKIG00005029292 ENSOKIG00005029303 arhgap15 (ENSOKIG00005029335) #27 ENSOKIG00005029400 ENSOKIG00005029416 ARL4C (ENSOKIG00005029427) ENSOKIG00005029435 SH3BP4 (ENSOKIG00005029441) ENSOKIG00005006226 ENSOKIG00005006239 CNTNAP5 (ENSOKIG00005006419) ENSOKIG00005009080 ENSOKIG00005009095 CNTNAP5 (ENSOKIG00005009128) gypc (ENSOKIG00005009358) Rainbow trout MODERN SPECIES 14 ENSOMYG00000024209 ENSOMYG00000024282 NMI (ENSOMYG00000024338) RND3 (ENSOMYG00000024351) rnd3b (ENSOMYG00000024432) MMADHC (ENSOMYG00000024468) LYPD6 (ENSOMYG00000024481) LYPD6B (ENSOMYG00000024505) ENSOMYG00000048707 epc2 (ENSOMYG00000024755) ENSOMYG00000025244 ENSOMYG00000025274 acvr2aa (ENSOMYG00000025406) ENSOMYG00000072394 ENSOMYG00000060224 zeb2a (ENSOMYG00000025728) ##22 arhgap15 (ENSOMYG00000025805) #27 ENSOMYG00000068933 ENSOMYG00000025873 ENSOMYG00000068371 ENSOMYG00000025966 ENSOMYG00000025984 ENSOMYG00000026003 ENSOMYG00000026010 ENSOMYG00000026237 ENSOMYG00000069785 ENSOMYG00000051381 ENSOMYG00000027150 ENSOMYG00000069429 ENSOMYG00000017512 ENSOMYG00000049274 Huchen MODERN SPECIES 2021 zeb2a (ENSHHUG00000026143) ##22 Northern pike MODERN SPECIES 15 ENSELUG00000004966 rab3gap1 (ENSELUG00000004956) R3HDM1 (ENSELUG00000004909) UBXN4 (ENSELUG00000004855) ENSELUG00000004826 ENSELUG00000004778 rnd3b (ENSELUG00000004762) rnd3b (ENSELUG00000004752) mmadhcb (ENSELUG00000004743) LYPD6 (ENSELUG00000025460) lypd6b (ENSELUG00000004706) KIF5C (ENSELUG00000004683) epc2 (ENSELUG00000004633) MBD5 (ENSELUG00000004605) acvr2aa (ENSELUG00000004570) zeb2a (ENSELUG00000004545) ##22 ENSELUG00000027327 gtdc1 (ENSELUG00000004515) #25 arhgap15 (ENSELUG00000004474) #27 ADPRH (ENSELUG00000004422) ARL4C (ENSELUG00000004400) sh3bp4 (ENSELUG00000004382) ENSELUG00000004356 ENSELUG00000004224 CNTNAP5 (ENSELUG00000003908) ndufa10 (ENSELUG00000003853) ENSELUG00000003796 agpat3 (ENSELUG00000003749) pdxka (ENSELUG00000003730) ENSELUG00000028423 TMPRSS3 (ENSELUG00000003710) Gnathostomata ANCESTRAL SPECIES 1028 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 Elephant shark MODERN SPECIES 1733 ENSCMIG00000018612 shmt2 (ENSCMIG00000018662) NXPH4 (ENSCMIG00000018759) LRP1 (ENSCMIG00000018861) ENSCMIG00000018975 ##22 ENSCMIG00000018979 ##27 mars1 (ENSCMIG00000018983) ENSCMIG00000018987 ENSCMIG00000018988 ENSCMIG00000018989 dctn2 (ENSCMIG00000019008) ENSCMIG00000019072 pip4k2ca (ENSCMIG00000019079) Euteleostomi ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Amniota ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Sauria ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Archelosauria ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Cryptodira ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Testudinoidea ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Emydidae ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Three-toed box turtle MODERN SPECIES 2425 ENSTMTG00000015492 ##22 Coelacanth MODERN SPECIES 224 naca (ENSLACG00000018689) PRIM1 (ENSLACG00000018692) PAN2 (ENSLACG00000018694) INPP1 (ENSLACG00000018703) DNAJC14 (ENSLACG00000018708) ORMDL2 (ENSLACG00000018715) SARNP (ENSLACG00000018719) gdf11 (ENSLACG00000018739) RDH16 (ENSLACG00000018767) gpr182 (ENSLACG00000018770) GPR182 (ENSLACG00000018771) ZBTB39 (ENSLACG00000018773) ENSLACG00000018787 NEMP1 (ENSLACG00000022538) NAB2 (ENSLACG00000018800) ENSLACG00000018829 ##22 ARHGAP9 (ENSLACG00000018841) ##27 MARS1 (ENSLACG00000018854) DDIT3 (ENSLACG00000018860) ATF1 (ENSLACG00000018861) ENSLACG00000018868 METTL7A (ENSLACG00000018882) SCN8A (ENSLACG00000018890) FIGNL2 (ENSLACG00000018930) SLC4A8 (ENSLACG00000018933) GALNT6 (ENSLACG00000018944) ENSLACG00000018947 CELA1 (ENSLACG00000018953) BIN2 (ENSLACG00000018956) PMEL (ENSLACG00000018957) CDK2 (ENSLACG00000018959) Actinopterygii ANCESTRAL SPECIES ENSGT00950000183208.A.d ##22 Neopterygii ANCESTRAL SPECIES 117 ENSGT00390000012629 ENSGT01050000244890.a.b.b ENSGT00940000155489.b ENSGT00940000155250 ENSGT01090000260051.b.a.a.a ENSGT00940000155460 ENSGT00940000157899.b ENSGT00950000182883.b.a.b ENSGT00390000002762.a.a ENSGT00940000161040 ENSGT00950000183092.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00530000064137.a.a ENSGT00390000003427 ENSGT00940000159439 ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000160763 ENSGT00940000157748 ENSGT00940000155850 ENSGT00940000161293 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 Spotted gar MODERN SPECIES 670 rarga (ENSLOCG00000006240) nr1d4b (ENSLOCG00000006223) mfsd5 (ENSLOCG00000018206) FAIM2 (ENSLOCG00000006201) ENSLOCG00000006182 rbms2b (ENSLOCG00000006148) ENSLOCG00000006126 LRP1 (ENSLOCG00000006089) NXPH4 (ENSLOCG00000006080) shmt2 (ENSLOCG00000006059) NDUFA4L2 (ENSLOCG00000006035) stac3 (ENSLOCG00000005998) R3HDM2 (ENSLOCG00000005976) INHBC (ENSLOCG00000005963) gli1 (ENSLOCG00000005938) ENSLOCG00000005919 ##22 ARHGAP9 (ENSLOCG00000005905) ##27 ENSLOCG00000005882 ddit3 (ENSLOCG00000005864) ENSLOCG00000005853 dctn2 (ENSLOCG00000005825) kif5aa (ENSLOCG00000005807) soat2 (ENSLOCG00000005783) igsf8 (ENSLOCG00000005749) ENSLOCG00000005735 tarbp2 (ENSLOCG00000005711) ENSLOCG00000005691 sp7 (ENSLOCG00000005679) ENSLOCG00000018204 sp1 (ENSLOCG00000005658) ENSLOCG00000005638 Osteoglossocephalai ANCESTRAL SPECIES 1 ENSGT00940000159809 ENSGT00940000167348 ENSGT00950000182810.A.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000171242 ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00530000064137.a.a ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT01060000252161 Clupeocephala ANCESTRAL SPECIES 7 ENSGT00950000182810.A.a.a.b ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00530000064137.a.a ENSGT00390000003427 ENSGT00940000159439.b ENSGT01030000234815 ENSGT01090000259987.a.b.c ENSGT00940000155003.e.a ENSGT00940000154801 ENSGT00950000182860.a.a.b.a.b ##27 ENSGT00950000183208.B.f.a ##22 ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 Otomorpha ANCESTRAL SPECIES 89 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.c ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00530000064137.a.a ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000160885 ENSGT01060000252161 ENSGT00940000154129.gd Clupeiformes ANCESTRAL SPECIES 72 ENSGT00390000014429.a ENSGT00940000156378.a.a ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.c ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00530000064137.a.a ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000160885 ENSGT00940000154129.gd ENSGT00940000159006.c.a Atlantic herring MODERN SPECIES 21 FAM107A (ENSCHAG00000009493) ccdc3b (ENSCHAG00000009526) CAMK1 (ENSCHAG00000009558) prelid3b (ENSCHAG00000009883) aurka (ENSCHAG00000009943) slc32a1 (ENSCHAG00000010318) ARHGAP40 (ENSCHAG00000010341) PPP1R16B (ENSCHAG00000010420) fam210b (ENSCHAG00000010506) ENSCHAG00000010521 shmt2 (ENSCHAG00000010569) STAC3 (ENSCHAG00000012579) R3HDM2 (ENSCHAG00000012793) INHBC (ENSCHAG00000014032) gli1 (ENSCHAG00000014040) ENSCHAG00000014050 ##22 ARHGAP9 (ENSCHAG00000014062) ##27 mars1 (ENSCHAG00000014303) ddit3 (ENSCHAG00000017490) ENSCHAG00000017499 dctn2 (ENSCHAG00000017516) KIF5A (ENSCHAG00000017864) ENSCHAG00000021053 soat2 (ENSCHAG00000021074) igsf8 (ENSCHAG00000021302) sp7 (ENSCHAG00000021305) tarbp2 (ENSCHAG00000021309) LRP1 (ENSCHAG00000021367) ENSCHAG00000022356 nuf2 (ENSCHAG00000022403) rab43 (ENSCHAG00000022422) Denticle herring MODERN SPECIES 3 CAMK1 (ENSDCDG00000034765) prelid3b (ENSDCDG00000034757) aurka (ENSDCDG00000034756) slc32a1 (ENSDCDG00000034755) ARHGAP40 (ENSDCDG00000034753) PPP1R16B (ENSDCDG00000034751) fam210b (ENSDCDG00000034750) NDUFA4L2 (ENSDCDG00000034749) shmt2 (ENSDCDG00000034339) NXPH4 (ENSDCDG00000034291) STAC3 (ENSDCDG00000034285) R3HDM2 (ENSDCDG00000034227) INHBC (ENSDCDG00000034210) gli1 (ENSDCDG00000034209) ENSDCDG00000034205 ENSDCDG00000034204 ##22 ARHGAP9 (ENSDCDG00000034201) ##27 mars1 (ENSDCDG00000034102) ddit3 (ENSDCDG00000034074) ENSDCDG00000034072 dctn2 (ENSDCDG00000034020) ENSDCDG00000034007 KIF5A (ENSDCDG00000032977) soat2 (ENSDCDG00000032935) igsf8 (ENSDCDG00000032932) sp7 (ENSDCDG00000032929) tarbp2 (ENSDCDG00000032927) ENSDCDG00000032921 sp1 (ENSDCDG00000032919) AMHR2 (ENSDCDG00000032912) PCBP2 (ENSDCDG00000032895) Euteleosteomorpha ANCESTRAL SPECIES 5 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00940000154129.gd ENSGT00940000159006.c.a Protacanthopterygii ANCESTRAL SPECIES 98 ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00970000198185 ENSGT00940000154129.gd.a.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 202 ENSGT00940000155325.a.b.a.c.a ENSGT00940000155851.c.b ENSGT00390000000911.h.b.i ENSGT01050000244971.A.d.a.a ENSGT00390000004940.a.b.o.b ENSGT00940000154417.d.g ENSGT00490000043380.a.i ENSGT00940000162174.d ENSGT00940000154090.b.f.a ENSGT00940000156134.p ENSGT00390000002762.a.a.b.a.d ENSGT00950000182883.b.a.b.a.g ENSGT00940000155609.k.a.a ENSGT00940000160065.g ENSGT00940000160235.g.a ENSGT00950000183208.A.d.a ##22 ENSGT00950000182860.a.b.a.e ##27 ENSGT00390000006305.m ENSGT00390000003427.a.a ENSGT00940000159439.b.a ENSGT00940000161293.c ENSGT00940000160763.g ENSGT00940000154129.gd.a.a ENSGT00940000159006.c.a.a Huchen MODERN SPECIES 3506 ENSHHUG00000020094 ENSHHUG00000020104 ENSHHUG00000020108 ##22 Salmoninae_a ANCESTRAL SPECIES 25 ENSGT00940000155851.c.b ENSGT00390000000911.h.b.i ENSGT01050000244971.A.d.a.a ENSGT01010000223025.b ENSGT00390000004940.a.b.o.b ENSGT00940000154417.d.g ENSGT00490000043380.a.i ENSGT00940000162174.d ENSGT00940000154090.b.f.a ENSGT00940000156134.p ENSGT00390000002762.a.a.b.a.d ENSGT00950000182883.b.a.b.a.g ENSGT00940000155609.k.a.a ENSGT00940000160065.g ENSGT00940000160235.g.a ENSGT00950000183208.A.d.a ##22 ENSGT00950000182860.a.b.a.e ##27 ENSGT00390000006305.m ENSGT00390000003427.a.a ENSGT00940000159439.b.a ENSGT00940000161293.c ENSGT00940000160763.g ENSGT00940000154129.gd.a.a ENSGT00940000159006.c.a.a ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.z.b ENSGT00940000154697.a.b.xb ENSGT00940000165514.g ENSGT00940000154984.B ENSGT00940000160096 Oncorhynchus ANCESTRAL SPECIES 5 ENSGT00940000155851.c.b ENSGT00390000000911.h.b.i ENSGT01050000244971.A.d.a.a.a ENSGT00390000004940.a.b.o.b ENSGT01010000223025.b ENSGT00940000154417.d.g ENSGT00490000043380.a.i ENSGT00940000162174.d ENSGT00940000154090.b.f.a ENSGT00940000156134.p ENSGT01010000229889 ENSGT00950000182883.b.a.b.a.g ENSGT00940000155609.k.a.a ENSGT00940000160065.g ENSGT00940000160235.g.a ENSGT00950000183208.A.d.a ##22 ENSGT00950000182860.a.b.a.e ##27 ENSGT00390000006305.m ENSGT00390000003427.a.a ENSGT00940000159439.b.a ENSGT00940000161293.c ENSGT00940000160763.g ENSGT00940000157804.p ENSGT00940000154129.gd.a.a ENSGT00940000159006.c.a.a ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.z.b ENSGT00940000154697.a.b.xb ENSGT00940000165514.g ENSGT00940000154984.B Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT00940000155851.c.b ENSGT00390000000911.h.b.i ENSGT01050000244971.A.d.a.a.a ENSGT00390000004940.a.b.o.b ENSGT01010000223025.b ENSGT00940000154417.d.g ENSGT00490000043380.a.i ENSGT00940000162174.d ENSGT00940000154090.b.f.a ENSGT00940000156134.p ENSGT01010000229889 ENSGT00950000182883.b.a.b.a.g ENSGT00940000155609.k.a.a ENSGT00940000160065.g ENSGT00940000160235.g.a ENSGT00950000183208.A.d.a ##22 ENSGT00950000182860.a.b.a.e ##27 ENSGT00390000006305.m ENSGT00390000003427.a.a ENSGT00940000159439.b.a ENSGT00940000161293.c ENSGT00940000160763.g ENSGT00940000157804.p ENSGT00940000154129.gd.a.a ENSGT00940000159006.c.a.a ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.z.b ENSGT00940000154697.a.b.xb ENSGT00940000165514.g ENSGT00940000154984.B Coho salmon MODERN SPECIES 25 ENSOKIG00005000231 camk2n1 (ENSOKIG00005000210) ENSOKIG00005000205 ENSOKIG00005000200 ddx19b (ENSOKIG00005000187) SLC32A1 (ENSOKIG00005000179) ENSOKIG00005000159 PPP1R16B (ENSOKIG00005000113) ENSOKIG00005000056 ENSOKIG00005000043 NXPH4 (ENSOKIG00005000023) ENSOKIG00005000010 R3HDM2 (ENSOKIG00005032208) INHBC (ENSOKIG00005032179) gli1 (ENSOKIG00005032090) ENSOKIG00005032066 ##22 ARHGAP9 (ENSOKIG00005031927) ##27 ddit3 (ENSOKIG00005031895) dctn2 (ENSOKIG00005031094) ENSOKIG00005031017 KIF5A (ENSOKIG00005030690) SP7 (ENSOKIG00005030626) ENSOKIG00005030583 ENSOKIG00005030565 PCBP2 (ENSOKIG00005030528) MAP3K12 (ENSOKIG00005029888) ENSOKIG00005029851 RIMS4 (ENSOKIG00005029828) YWHAB (ENSOKIG00005029741) tomm34 (ENSOKIG00005029718) cox6c (ENSOKIG00005029702) Chinook salmon MODERN SPECIES 31 mapk14b (ENSOTSG00005029649) DNAJC16 (ENSOTSG00005029528) cdab (ENSOTSG00005029527) ENSOTSG00005029525 camk2n1 (ENSOTSG00005029524) ENSOTSG00005029522 ddx19b (ENSOTSG00005029464) slc32a1 (ENSOTSG00005029457) ARHGAP40 (ENSOTSG00005029456) PPP1R16B (ENSOTSG00005029443) ENSOTSG00005029440 NXPH4 (ENSOTSG00005029437) R3HDM2 (ENSOTSG00005028531) INHBC (ENSOTSG00005028520) gli1 (ENSOTSG00005028515) ENSOTSG00005028513 ##22 ARHGAP9 (ENSOTSG00005028424) ##27 ddit3 (ENSOTSG00005028420) dctn2 (ENSOTSG00005028365) KIF5A (ENSOTSG00005028355) sp7 (ENSOTSG00005028351) ENSOTSG00005028350 PCBP2 (ENSOTSG00005028349) MAP3K12 (ENSOTSG00005028346) ENSOTSG00005028345 RIMS4 (ENSOTSG00005028344) YWHAB (ENSOTSG00005028342) tomm34 (ENSOTSG00005028341) cox6c (ENSOTSG00005028340) ENSOTSG00005026299 KCNS1 (ENSOTSG00005026293) Rainbow trout MODERN SPECIES 28 ENSOMYG00000023376 camk2n1 (ENSOMYG00000023367) ENSOMYG00000023352 ddx19b (ENSOMYG00000023284) ENSOMYG00000069626 ENSOMYG00000023234 ENSOMYG00000023176 ENSOMYG00000022989 ENSOMYG00000022867 ENSOMYG00000022828 ENSOMYG00000022797 ENSOMYG00000051093 R3HDM2 (ENSOMYG00000021429) INHBC (ENSOMYG00000021098) gli1 (ENSOMYG00000021075) ENSOMYG00000021048 ##22 ENSOMYG00000021038 ARHGAP9 (ENSOMYG00000021030) ##27 ddit3 (ENSOMYG00000066053) dctn2 (ENSOMYG00000020113) ENSOMYG00000020033 KIF5A (ENSOMYG00000019804) ENSOMYG00000061411 ENSOMYG00000019713 ENSOMYG00000019703 ENSOMYG00000019672 ENSOMYG00000010474 ENSOMYG00000034159 ENSOMYG00000069204 ENSOMYG00000055788 ENSOMYG00000066236 Salmo ANCESTRAL SPECIES 6 ENSGT00940000155851.c.b ENSGT00390000000911.h.b.i ENSGT01050000244971.A.d.a.a ENSGT01010000223025.b ENSGT00390000004940.a.b.o.b ENSGT00940000154417.d.g ENSGT00490000043380.a.i ENSGT00940000162174.d ENSGT00940000154090.b.f.a ENSGT00940000156134.p ENSGT00390000002762.a.a.b.a.d ENSGT00950000182883.b.a.b.a.g ENSGT00940000155609.k.a.a ENSGT00940000160065.g ENSGT00940000160235.g.a ENSGT00950000183208.A.d.a ##22 ENSGT00950000182860.a.b.a.e ##27 ENSGT00390000006305.m ENSGT00390000003427.a.a ENSGT00940000159439.b.a ENSGT00940000161293.c ENSGT00940000160763.g ENSGT00940000154129.gd.a.a ENSGT00940000159006.c.a.a ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.z.b ENSGT00940000154697.a.b.xb ENSGT00940000165514.g ENSGT00940000154984.B ENSGT00940000160096 Atlantic salmon MODERN SPECIES 14 ENSSSAG00000066858 cdd (ENSSSAG00000066839) ENSSSAG00000066837 ENSSSAG00000066832 ENSSSAG00000066715 ENSSSAG00000100803 ENSSSAG00000066689 ENSSSAG00000094656 ppp1r16b (ENSSSAG00000066102) fam210b (ENSSSAG00000066096) shmt2 (ENSSSAG00000066094) ENSSSAG00000082070 R3HDM2 (ENSSSAG00000064420) INHBC (ENSSSAG00000090732) gli1 (ENSSSAG00000064356) ENSSSAG00000064348 ##22 RHG15 (ENSSSAG00000064319) ##27 ENSSSAG00000109066 ENSSSAG00000122184 ENSSSAG00000093872 ddit3 (ENSSSAG00000103408) DCTN2 (ENSSSAG00000063429) KIF5A (ENSSSAG00000053327) ENSSSAG00000053099 ENSSSAG00000053096 ENSSSAG00000053031 ENSSSAG00000050832 ENSSSAG00000050804 ENSSSAG00000089084 ENSSSAG00000050790 tomm34 (ENSSSAG00000050785) Salmoninae ANCESTRAL SPECIES 101 ENSGT01010000223025 ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a.j ENSGT00940000162174.c ENSGT00940000154090.b.f.b ENSGT00940000156134.o ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.c ENSGT00950000182883.b.a.b.a.h ENSGT00950000183092.a.d.a ENSGT00940000155609.k.a.b ENSGT00940000160065.h ENSGT00940000160235.g.b ENSGT00950000183208.A.d.b ##22 ENSGT00950000182860.a.b.a.f ##27 ENSGT00550000075017.f ENSGT00550000075017.e.a ENSGT00390000006305.n ENSGT00390000003427.a.b ENSGT00940000159439.b.b ENSGT00950000183081.a.a.b ENSGT00990000205462.b ENSGT00940000161314 ENSGT00940000161293.d ENSGT00940000157748 ENSGT00940000160763.h ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 Salmoninae_a ANCESTRAL SPECIES 29 ENSGT00940000154417.d.h ENSGT01010000223025.a ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a.j ENSGT00940000162174.c ENSGT00940000154090.b.f.b ENSGT00940000156134.o ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.c ENSGT00950000182883.b.a.b.a.h ENSGT00950000183092.a.d.a ENSGT00940000155609.k.a.b ENSGT00940000160065.h ENSGT00940000160235.g.b ENSGT00950000183208.A.d.b ##22 ENSGT00950000182860.a.b.a.f ##27 ENSGT00550000075017.f ENSGT00390000006305.n ENSGT00390000003427.a.b ENSGT00940000159439.b.b ENSGT00950000183081.a.a.b ENSGT00990000205462.b ENSGT00940000161314 ENSGT00940000161293.d ENSGT00940000157748 ENSGT00940000160763.h ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00970000198185 Salmo DUPLICATION Salmo ANCESTRAL SPECIES 33 ENSGT00940000154417.d.h ENSGT01010000223025.a ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a.j ENSGT00940000162174.c ENSGT00940000154090.b.f.b ENSGT00940000156134.o ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.c ENSGT00950000182883.b.a.b.a.h ENSGT00950000183092.a.d.a ENSGT00940000155609.k.a.b ENSGT00940000160065.h ENSGT00940000160235.g.b ENSGT00950000183208.A.d.b.a ##22 ENSGT00950000182860.a.b.a.f ##27 ENSGT00550000075017.e.a ENSGT00390000006305.n ENSGT00390000003427.a.b ENSGT00940000159439.b.b ENSGT00950000183081.a.a.b ENSGT00990000205462.b ENSGT00940000161314 ENSGT00940000161293.d ENSGT00940000157748 ENSGT00940000160763.h ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00970000198185 River trout MODERN SPECIES 5 ENSSTUG00000009909 ENSSTUG00000009899 ddx19b (ENSSTUG00000009179) prelid3b (ENSSTUG00000009088) aurka (ENSSTUG00000009070) slc32a1 (ENSSTUG00000009050) ARHGAP40 (ENSSTUG00000009023) PPP1R16B (ENSSTUG00000008935) fam210b (ENSSTUG00000008899) ENSSTUG00000008885 shmt2 (ENSSTUG00000008201) STAC3 (ENSSTUG00000008055) R3HDM2 (ENSSTUG00000006166) INHBC (ENSSTUG00000006022) gli1 (ENSSTUG00000006004) ENSSTUG00000005974 ##22 ARHGAP9 (ENSSTUG00000005929) ##27 ENSSTUG00000005898 ENSSTUG00000005888 ENSSTUG00000005882 ENSSTUG00000005876 ENSSTUG00000005874 ENSSTUG00000005869 KIF5A (ENSSTUG00000005729) soat2 (ENSSTUG00000005685) sp7 (ENSSTUG00000005662) tarbp2 (ENSSTUG00000005649) ENSSTUG00000005625 sp1 (ENSSTUG00000005612) ENSSTUG00000005605 ENSSTUG00000005588 Atlantic salmon MODERN SPECIES 3 ENSSSAG00000031016 ENSSSAG00000090594 ENSSSAG00000031237 ENSSSAG00000092320 ENSSSAG00000094059 ENSSSAG00000031772 fam210b (ENSSSAG00000093027) NDUFA4L2 (ENSSSAG00000120770) GLYM (ENSSSAG00000040078) NXPH4 (ENSSSAG00000045938) STAC3 (ENSSSAG00000045942) R3HDM2 (ENSSSAG00000045994) INHBC (ENSSSAG00000104549) gli1 (ENSSSAG00000046547) ENSSSAG00000046521 ENSSSAG00000046598 ##22 ARHGAP9 (ENSSSAG00000046609) ##27 mars1 (ENSSSAG00000046703) ENSSSAG00000101325 ddit3 (ENSSSAG00000106324) DCTN2 (ENSSSAG00000046757) KIF5A (ENSSSAG00000046870) ENSSSAG00000105805 soat2 (ENSSSAG00000054974) ENSSSAG00000091458 igsf8 (ENSSSAG00000090217) sp7 (ENSSSAG00000005832) tarbp2 (ENSSSAG00000005813) ENSSSAG00000005801 sp1 (ENSSSAG00000005792) ENSSSAG00000005784 Salmo ANCESTRAL SPECIES ENSGT00950000183208.A.d.b.b ##22 River trout MODERN SPECIES 7 DNAJC16 (ENSSTUG00000030079) cdab (ENSSTUG00000030408) ENSSTUG00000030414 camk2n1 (ENSSTUG00000030424) ddx19b (ENSSTUG00000030430) ENSSTUG00000030692 slc32a1 (ENSSTUG00000030703) ENSSTUG00000030723 PPP1R16B (ENSSTUG00000030736) ENSSTUG00000030798 ENSSTUG00000030803 NXPH4 (ENSSTUG00000030818) R3HDM2 (ENSSTUG00000029974) INHBC (ENSSTUG00000030462) gli1 (ENSSTUG00000030470) ENSSTUG00000030511 ##22 ARHGAP9 (ENSSTUG00000030522) ##27 ddit3 (ENSSTUG00000030619) dctn2 (ENSSTUG00000030644) KIF5A (ENSSTUG00000030857) ENSSTUG00000032354 sp7 (ENSSTUG00000032370) ENSSTUG00000032374 PCBP2 (ENSSTUG00000032405) MAP3K12 (ENSSTUG00000032545) ENSSTUG00000033463 RIMS4 (ENSSTUG00000033491) YWHAB (ENSSTUG00000033516) tomm34 (ENSSTUG00000033567) cox6c (ENSSTUG00000033586) ENSSTUG00000033646 Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00390000004940.a.b.o.a ENSGT00940000154417.d.h ENSGT01010000223025.a ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a.j ENSGT00940000162174.c ENSGT00940000154090.b.f.b ENSGT00940000156134.o ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.c ENSGT00950000182883.b.a.b.a.h ENSGT00940000160065.h ENSGT00940000155609.k.a.b ENSGT00940000160235.g.b ENSGT00950000183208.A.d.b ##22 ENSGT00950000182860.a.b.a.f ##27 ENSGT00550000075017.f ENSGT00390000006305.n ENSGT00390000003427.a.b ENSGT00940000159439.b.b ENSGT00950000183081.a.a.b ENSGT00990000205462.b ENSGT00940000161314 ENSGT00940000161293.d ENSGT00940000157748 ENSGT00940000160763.h ENSGT00940000157804.o ENSGT00940000167008 ENSGT00940000160885 ENSGT00970000198185 Oncorhynchus_a ANCESTRAL SPECIES 54 ENSGT00390000004940.a.b.o.a ENSGT00940000154417.d.h ENSGT01010000223025.a ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a.j ENSGT00940000162174.c ENSGT00940000154090.b.f.b ENSGT00940000156134.o ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.c ENSGT00950000182883.b.a.b.a.h ENSGT00940000160065.h ENSGT00940000155609.k.a.b ENSGT00940000160235.g.b ENSGT00950000183208.A.d.b ##22 ENSGT00950000182860.a.b.a.f ##27 ENSGT00550000075017.f ENSGT00390000006305.n ENSGT00390000003427.a.b ENSGT00940000159439.b.b ENSGT00950000183081.a.a.b ENSGT00990000205462.b ENSGT00940000161314 ENSGT00940000161293.d ENSGT00940000157748 ENSGT00940000160763.h ENSGT00940000157804.o ENSGT00940000167008 ENSGT00940000160885 ENSGT00970000198185 Coho salmon MODERN SPECIES prelid3b (ENSOKIG00005026798) aurka (ENSOKIG00005026781) slc32a1 (ENSOKIG00005026758) ARHGAP40 (ENSOKIG00005026743) ENSOKIG00005026729 PPP1R16B (ENSOKIG00005026717) fam210b (ENSOKIG00005026712) NDUFA4L2 (ENSOKIG00005026708) shmt2 (ENSOKIG00005026554) NXPH4 (ENSOKIG00005026535) ENSOKIG00005026530 ENSOKIG00005026523 R3HDM2 (ENSOKIG00005025940) ENSOKIG00005025861 gli1 (ENSOKIG00005025774) ENSOKIG00005025741 ##22 ARHGAP9 (ENSOKIG00005025693) ##27 mars1 (ENSOKIG00005025087) ENSOKIG00005025047 ddit3 (ENSOKIG00005025033) dctn2 (ENSOKIG00005024922) ENSOKIG00005024898 KIF5A (ENSOKIG00005023596) ENSOKIG00005023522 soat2 (ENSOKIG00005023472) sp7 (ENSOKIG00005023466) ENSOKIG00005023457 tarbp2 (ENSOKIG00005023447) ENSOKIG00005023433 SP1 (ENSOKIG00005023422) ENSOKIG00005023404 Chinook salmon MODERN SPECIES 1059 ENSOTSG00005041304 ##22 Rainbow trout MODERN SPECIES 8 ddx19b (ENSOMYG00000009954) ENSOMYG00000011277 ENSOMYG00000011297 ENSOMYG00000011329 ENSOMYG00000066952 ENSOMYG00000055935 fam210b (ENSOMYG00000011356) NDUFA4L2 (ENSOMYG00000074259) shmt2 (ENSOMYG00000011457) NXPH4 (ENSOMYG00000013213) ENSOMYG00000013220 ENSOMYG00000069248 ENSOMYG00000067800 ENSOMYG00000073355 GLI1 (ENSOMYG00000013255) ENSOMYG00000013334 ##22 ARHGAP9 (ENSOMYG00000013346) ##27 mars1 (ENSOMYG00000013360) ddit3 (ENSOMYG00000013405) dctn2 (ENSOMYG00000013443) KIF5A (ENSOMYG00000055988) ENSOMYG00000058930 soat2 (ENSOMYG00000013534) igsf8 (ENSOMYG00000030392) sp7 (ENSOMYG00000030402) ENSOMYG00000030432 ENSOMYG00000075823 SP1 (ENSOMYG00000030362) ENSOMYG00000030352 AMHR2 (ENSOMYG00000030326) ENSOMYG00000030312 Huchen MODERN SPECIES 4873 ENSHHUG00000013935 ENSHHUG00000013875 ##22 ENSHHUG00000013869 ##27 Northern pike MODERN SPECIES 16 ENSELUG00000028856 ENSELUG00000034488 aurka (ENSELUG00000019389) ENSELUG00000032646 slc32a1 (ENSELUG00000032744) ENSELUG00000019348 PPP1R16B (ENSELUG00000019307) fam210b (ENSELUG00000019248) NDUFA4L2 (ENSELUG00000019234) shmt2 (ENSELUG00000019224) NXPH4 (ENSELUG00000019200) STAC3 (ENSELUG00000015859) R3HDM2 (ENSELUG00000015969) INHBC (ENSELUG00000026593) gli1 (ENSELUG00000010164) ENSELUG00000010204 ##22 ARHGAP9 (ENSELUG00000010297) ##27 mars1 (ENSELUG00000010453) ddit3 (ENSELUG00000010496) dctn2 (ENSELUG00000010533) KIF5A (ENSELUG00000034150) soat2 (ENSELUG00000010574) igsf8 (ENSELUG00000010602) sp7 (ENSELUG00000025531) ENSELUG00000010623 tarbp2 (ENSELUG00000010642) ENSELUG00000010666 sp1 (ENSELUG00000010685) ENSELUG00000010697 AMHR2 (ENSELUG00000010715) ENSELUG00000026683 Acanthomorphata ANCESTRAL SPECIES 26 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00940000154129.gd ENSGT00940000159006.c.a Euacanthomorphacea ANCESTRAL SPECIES 1 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Percomorphaceae ANCESTRAL SPECIES 1 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Percomorphaceae_C ANCESTRAL SPECIES 1 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Percomorphaceae_D ANCESTRAL SPECIES 3 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Anabantaria ANCESTRAL SPECIES ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Anabantoidei ANCESTRAL SPECIES 1 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00940000154129.gd ENSGT00940000159006.c.a Climbing perch MODERN SPECIES 18 ENSATEG00000025036 prelid3b (ENSATEG00000025035) ENSATEG00000025034 slc32a1 (ENSATEG00000027089) ENSATEG00000025032 ENSATEG00000025030 fam210b (ENSATEG00000025029) NDUFA4L2 (ENSATEG00000025028) shmt2 (ENSATEG00000025027) NXPH4 (ENSATEG00000025026) STAC3 (ENSATEG00000025025) R3HDM2 (ENSATEG00000025024) ENSATEG00000028260 INHBC (ENSATEG00000025023) gli1 (ENSATEG00000025022) ENSATEG00000025021 ##22 ARHGAP9 (ENSATEG00000025020) ##27 ddit3 (ENSATEG00000029330) mars1 (ENSATEG00000025019) dctn2 (ENSATEG00000025017) ENSATEG00000025016 ENSATEG00000025015 igsf8 (ENSATEG00000025014) ENSATEG00000025013 ENSATEG00000025012 ENSATEG00000026871 SP1 (ENSATEG00000025010) ENSATEG00000025009 AMHR2 (ENSATEG00000025008) PCBP2 (ENSATEG00000025007) MAP3K12 (ENSATEG00000025006) Zig-zag eel MODERN SPECIES 19 ipo9 (ENSMAMG00000008798) ENSMAMG00000009479 prelid3b (ENSMAMG00000009500) ENSMAMG00000009517 slc32a1 (ENSMAMG00000009549) ENSMAMG00000009558 ENSMAMG00000009581 fam210b (ENSMAMG00000028164) NDUFA4L2 (ENSMAMG00000009667) shmt2 (ENSMAMG00000009686) NXPH4 (ENSMAMG00000009730) STAC3 (ENSMAMG00000009748) R3HDM2 (ENSMAMG00000009793) INHBC (ENSMAMG00000009832) gli1 (ENSMAMG00000009841) ENSMAMG00000009904 ##22 ARHGAP9 (ENSMAMG00000009917) ##27 mars1 (ENSMAMG00000010012) ddit3 (ENSMAMG00000028715) dctn2 (ENSMAMG00000010138) KIF5A (ENSMAMG00000010203) soat2 (ENSMAMG00000010240) igsf8 (ENSMAMG00000010247) ENSMAMG00000010257 ENSMAMG00000010272 ENSMAMG00000010311 SP1 (ENSMAMG00000010349) AMHR2 (ENSMAMG00000010373) ENSMAMG00000010397 PCBP2 (ENSMAMG00000010416) MAP3K12 (ENSMAMG00000010441) Carangaria ANCESTRAL SPECIES 3 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Pleuronectoidei ANCESTRAL SPECIES 4 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293.f ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Turbot MODERN SPECIES 18 ENSSMAG00000011773 ENSSMAG00000011813 prelid3b (ENSSMAG00000011815) ENSSMAG00000011833 slc32a1 (ENSSMAG00000031105) ENSSMAG00000011867 ENSSMAG00000011937 fam210b (ENSSMAG00000024290) NDUFA4L2 (ENSSMAG00000011983) shmt2 (ENSSMAG00000012014) NXPH4 (ENSSMAG00000012048) STAC3 (ENSSMAG00000012053) R3HDM2 (ENSSMAG00000012073) INHBC (ENSSMAG00000024860) gli1 (ENSSMAG00000012216) ENSSMAG00000028151 ##22 ARHGAP9 (ENSSMAG00000012272) ##27 mars1 (ENSSMAG00000012409) ddit3 (ENSSMAG00000012530) dctn2 (ENSSMAG00000012547) KIF5A (ENSSMAG00000012588) soat2 (ENSSMAG00000012714) igsf8 (ENSSMAG00000012735) ENSSMAG00000022200 TARBP2 (ENSSMAG00000012769) ENSSMAG00000027302 SP1 (ENSSMAG00000012813) ENSSMAG00000012830 AMHR2 (ENSSMAG00000012859) ENSSMAG00000012872 PCBP2 (ENSSMAG00000012889) Tongue sole MODERN SPECIES 2 ubap1 (ENSCSEG00000012455) dcaf12 (ENSCSEG00000012439) opn1lw1 (ENSCSEG00000011345) gnl3l (ENSCSEG00000011209) dido1 (ENSCSEG00000011175) ubap2a (ENSCSEG00000011158) KCNK15 (ENSCSEG00000011149) opn1sw2 (ENSCSEG00000011138) hcfc1a (ENSCSEG00000011118) shmt2 (ENSCSEG00000011047) NXPH4 (ENSCSEG00000011029) STAC3 (ENSCSEG00000011014) R3HDM2 (ENSCSEG00000010925) INHBC (ENSCSEG00000010908) gli1 (ENSCSEG00000010901) ENSCSEG00000010889 ##22 ARHGAP9 (ENSCSEG00000010868) ##27 mars1 (ENSCSEG00000010816) ddit3 (ENSCSEG00000010799) dctn2 (ENSCSEG00000010766) KIF5A (ENSCSEG00000010724) soat2 (ENSCSEG00000010682) igsf8 (ENSCSEG00000010672) sp7 (ENSCSEG00000010658) tarbp2 (ENSCSEG00000010631) ENSCSEG00000010620 ENSCSEG00000010614 sp1 (ENSCSEG00000010606) ENSCSEG00000010596 AMHR2 (ENSCSEG00000010574) PCBP2 (ENSCSEG00000010540) Eupercaria ANCESTRAL SPECIES ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Eupecaria_A ANCESTRAL SPECIES ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Eupecaria_B ANCESTRAL SPECIES 2 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Eupecaria_C ANCESTRAL SPECIES ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008.b ENSGT00940000160885 ENSGT00940000154129.gd ENSGT00940000159006.c.a Gilthead seabream MODERN SPECIES 20 GNAS (ENSSAUG00010020708) ENSSAUG00010021276 prelid3b (ENSSAUG00010021278) aurka (ENSSAUG00010021279) slc32a1 (ENSSAUG00010021281) ENSSAUG00010021285 PPP1R16B (ENSSAUG00010021293) fam210b (ENSSAUG00010021307) NDUFA4L2 (ENSSAUG00010021308) shmt2 (ENSSAUG00010021330) NXPH4 (ENSSAUG00010022698) STAC3 (ENSSAUG00010022700) R3HDM2 (ENSSAUG00010022718) INHBC (ENSSAUG00010023578) gli1 (ENSSAUG00010023582) ENSSAUG00010023585 ##22 ARHGAP9 (ENSSAUG00010023588) ##27 mars1 (ENSSAUG00010023606) ddit3 (ENSSAUG00010024012) dctn2 (ENSSAUG00010024017) KIF5A (ENSSAUG00010024019) soat2 (ENSSAUG00010024021) igsf8 (ENSSAUG00010024022) sp7 (ENSSAUG00010024024) tarbp2 (ENSSAUG00010024026) ENSSAUG00010024028 sp1 (ENSSAUG00010024032) ENSSAUG00010024034 AMHR2 (ENSSAUG00010024036) PCBP2 (ENSSAUG00010024041) MAP3K12 (ENSSAUG00010024058) Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008.b ENSGT00940000160885 ENSGT00940000154129.gd ENSGT00940000159006.c.a Large yellow croaker MODERN SPECIES 478 ENSLCRG00005021193 aurka (ENSLCRG00005021191) slc32a1 (ENSLCRG00005021190) ENSLCRG00005021187 ENSLCRG00005021179 ENSLCRG00005021174 PPP1R16B (ENSLCRG00005021158) ENSLCRG00005021143 NDUFA4L2 (ENSLCRG00005021136) shmt2 (ENSLCRG00005020491) NXPH4 (ENSLCRG00005020437) STAC3 (ENSLCRG00005020432) R3HDM2 (ENSLCRG00005020340) INHBC (ENSLCRG00005020329) gli1 (ENSLCRG00005020328) ENSLCRG00005020321 ##22 ARHGAP9 (ENSLCRG00005020314) ##27 mars1 (ENSLCRG00005018229) ddit3 (ENSLCRG00005018077) dctn2 (ENSLCRG00005018057) KIF5A (ENSLCRG00005017381) soat2 (ENSLCRG00005017358) igsf8 (ENSLCRG00005017357) sp7 (ENSLCRG00005017355) tarbp2 (ENSLCRG00005017354) ENSLCRG00005017346 sp1 (ENSLCRG00005017344) ENSLCRG00005017342 AMHR2 (ENSLCRG00005017338) PCBP2 (ENSLCRG00005017322) MAP3K12 (ENSLCRG00005016991) European seabass MODERN SPECIES 10 ENSDLAG00005031086 TUB (ENSDLAG00005009663) prelid3b (ENSDLAG00005009646) STK6 (ENSDLAG00005009640) slc32a1 (ENSDLAG00005009631) ENSDLAG00005009549 ENSDLAG00005009500 NDUFA4L2 (ENSDLAG00005026923) fam210b (ENSDLAG00005033260) ENSDLAG00005008419 NXPH4 (ENSDLAG00005008386) STAC3 (ENSDLAG00005034079) R3HDM2 (ENSDLAG00005007143) INHBC (ENSDLAG00005007075) gli1 (ENSDLAG00005007028) ENSDLAG00005030897 ##22 ARHGAP9 (ENSDLAG00005006921) ##27 mars1 (ENSDLAG00005004499) ddit3 (ENSDLAG00005013732) dctn2 (ENSDLAG00005013696) KIF5A (ENSDLAG00005012989) soat2 (ENSDLAG00005012634) igsf8 (ENSDLAG00005012622) ENSDLAG00005012618 ENSDLAG00005012584 ENSDLAG00005012558 SP1 (ENSDLAG00005028905) ENSDLAG00005012532 AMHR2 (ENSDLAG00005012420) PCBP2 (ENSDLAG00005012212) MAP3K12 (ENSDLAG00005011757) Perciformes ANCESTRAL SPECIES ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00730000112701 ENSGT00940000154129.gd Perciformes_a ANCESTRAL SPECIES 5 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000160885 ENSGT00940000154129.gd ENSGT00940000159006.c.a Channel bull blenny MODERN SPECIES 19 ENSCGOG00000013273 ENSCGOG00000013226 prelid3b (ENSCGOG00000013223) aurka (ENSCGOG00000013220) slc32a1 (ENSCGOG00000013219) ARHGAP40 (ENSCGOG00000013199) PPP1R16B (ENSCGOG00000013096) fam210b (ENSCGOG00000013094) NDUFA4L2 (ENSCGOG00000013093) shmt2 (ENSCGOG00000012216) NXPH4 (ENSCGOG00000012188) ENSCGOG00000012169 R3HDM2 (ENSCGOG00000010804) INHBC (ENSCGOG00000010778) gli1 (ENSCGOG00000010770) ENSCGOG00000010767 ##22 ARHGAP9 (ENSCGOG00000010754) ##27 mars1 (ENSCGOG00000008998) ddit3 (ENSCGOG00000010752) dctn2 (ENSCGOG00000008000) KIF5A (ENSCGOG00000003603) SOAT2 (ENSCGOG00000003521) igsf8 (ENSCGOG00000003517) sp7 (ENSCGOG00000003516) tarbp2 (ENSCGOG00000003490) ENSCGOG00000003488 sp1 (ENSCGOG00000003476) ENSCGOG00000003470 AMHR2 (ENSCGOG00000003462) PCBP2 (ENSCGOG00000003231) MAP3K12 (ENSCGOG00000003159) Pike perch MODERN SPECIES 17 tubb1 (ENSSLUG00000022418) prelid3b (ENSSLUG00000022398) aurka (ENSSLUG00000022392) slc32a1 (ENSSLUG00000022388) ENSSLUG00000022378 ENSSLUG00000022366 PPP1R16B (ENSSLUG00000022333) fam210b (ENSSLUG00000022322) NDUFA4L2 (ENSSLUG00000022317) shmt2 (ENSSLUG00000021526) NXPH4 (ENSSLUG00000021491) STAC3 (ENSSLUG00000021477) R3HDM2 (ENSSLUG00000020831) INHBC (ENSSLUG00000020798) gli1 (ENSSLUG00000020778) ENSSLUG00000020773 ##22 ARHGAP9 (ENSSLUG00000020770) ##27 mars1 (ENSSLUG00000020616) ddit3 (ENSSLUG00000020599) dctn2 (ENSSLUG00000020568) KIF5A (ENSSLUG00000019081) soat2 (ENSSLUG00000018992) igsf8 (ENSSLUG00000018986) sp7 (ENSSLUG00000018984) tarbp2 (ENSSLUG00000018974) ENSSLUG00000018967 sp1 (ENSSLUG00000018958) ENSSLUG00000018949 ENSSLUG00000018933 PCBP2 (ENSSLUG00000018910) MAP3K12 (ENSSLUG00000018620) Ovalentaria ANCESTRAL SPECIES 2 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Atherinomorphae ANCESTRAL SPECIES 2 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Oryzias ANCESTRAL SPECIES 1 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Oryzias_a ANCESTRAL SPECIES 5 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Japanese Medaka HdrR MODERN SPECIES 19 ENSORLG00000027123 prelid3b (ENSORLG00000005656) aurka (ENSORLG00000005631) slc32a1 (ENSORLG00000005623) ENSORLG00000005618 PPP1R16B (ENSORLG00000005566) ENSORLG00000026622 fam210b (ENSORLG00000026881) NDUFA4L2 (ENSORLG00000005542) shmt2 (ENSORLG00000005536) NXPH4 (ENSORLG00000028376) ENSORLG00000026255 R3HDM2 (ENSORLG00000005502) INHBC (ENSORLG00000005461) gli1 (ENSORLG00000005455) ENSORLG00000024860 ##22 ARHGAP9 (ENSORLG00000005431) ##27 mars1 (ENSORLG00000005405) ddit3 (ENSORLG00000022325) dctn2 (ENSORLG00000005353) KIF5A (ENSORLG00000005301) soat2 (ENSORLG00000005226) igsf8 (ENSORLG00000005224) sp7 (ENSORLG00000005215) TARBP2 (ENSORLG00000005209) ENSORLG00000005202 sp1 (ENSORLG00000005195) ENSORLG00000029598 PCBP2 (ENSORLG00000005176) MAP3K12 (ENSORLG00000005144) myg1 (ENSORLG00000005118) Cyprinodontiformes ANCESTRAL SPECIES 2 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Aplocheiloidei ANCESTRAL SPECIES 10 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Mangrove rivulus MODERN SPECIES 11 ipo9 (ENSKMAG00000013352) GNAS (ENSKMAG00000013306) ENSKMAG00000013126 prelid3b (ENSKMAG00000013055) aurka (ENSKMAG00000013017) slc32a1 (ENSKMAG00000012998) ENSKMAG00000012927 PPP1R16B (ENSKMAG00000012884) fam210b (ENSKMAG00000012861) NDUFA4L2 (ENSKMAG00000012841) shmt2 (ENSKMAG00000012809) NXPH4 (ENSKMAG00000012792) R3HDM2 (ENSKMAG00000012695) INHBC (ENSKMAG00000012645) gli1 (ENSKMAG00000012625) ENSKMAG00000012606 ##22 ARHGAP9 (ENSKMAG00000012550) ##27 ddit3 (ENSKMAG00000012519) mars1 (ENSKMAG00000012408) dctn2 (ENSKMAG00000012341) KIF5A (ENSKMAG00000012239) soat2 (ENSKMAG00000012185) igsf8 (ENSKMAG00000012166) sp7 (ENSKMAG00000012155) tarbp2 (ENSKMAG00000012142) ENSKMAG00000012119 sp1 (ENSKMAG00000012103) PCBP2 (ENSKMAG00000012031) MAP3K12 (ENSKMAG00000011955) myg1 (ENSKMAG00000011915) ENSKMAG00000011879 Cyprinodontoidei ANCESTRAL SPECIES 4 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Poeciliinae ANCESTRAL SPECIES 4 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Poecilia ANCESTRAL SPECIES 23 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 NAME_6 ANCESTRAL SPECIES 7 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Amazon molly MODERN SPECIES 254 ipo9 (ENSPFOG00000004346) GNAS (ENSPFOG00000004527) tubb1 (ENSPFOG00000004579) prelid3b (ENSPFOG00000004673) aurka (ENSPFOG00000004761) slc32a1 (ENSPFOG00000004785) ARHGAP40 (ENSPFOG00000005022) PPP1R16B (ENSPFOG00000005228) fam210b (ENSPFOG00000005251) NDUFA4L2 (ENSPFOG00000005259) shmt2 (ENSPFOG00000005424) NXPH4 (ENSPFOG00000005433) R3HDM2 (ENSPFOG00000006077) INHBC (ENSPFOG00000006113) gli1 (ENSPFOG00000006269) ENSPFOG00000006375 ##22 ARHGAP9 (ENSPFOG00000006700) ##27 mars1 (ENSPFOG00000006998) ddit3 (ENSPFOG00000007011) dctn2 (ENSPFOG00000007143) KIF5A (ENSPFOG00000007419) soat2 (ENSPFOG00000007442) igsf8 (ENSPFOG00000007483) sp7 (ENSPFOG00000007503) tarbp2 (ENSPFOG00000007586) ENSPFOG00000007616 sp1 (ENSPFOG00000007682) ENSPFOG00000007792 ENSPFOG00000007801 ENSPFOG00000007805 PCBP2 (ENSPFOG00000008011) Guppy MODERN SPECIES 457 GNAS (ENSPREG00000008899) ENSPREG00000008885 ENSPREG00000008878 prelid3b (ENSPREG00000008857) aurka (ENSPREG00000008806) slc32a1 (ENSPREG00000008781) ARHGAP40 (ENSPREG00000008695) PPP1R16B (ENSPREG00000008673) fam210b (ENSPREG00000008662) NDUFA4L2 (ENSPREG00000008652) shmt2 (ENSPREG00000008598) NXPH4 (ENSPREG00000008585) R3HDM2 (ENSPREG00000008424) INHBC (ENSPREG00000008347) gli1 (ENSPREG00000008295) ENSPREG00000008270 ##22 ARHGAP9 (ENSPREG00000008228) ##27 ddit3 (ENSPREG00000008197) mars1 (ENSPREG00000008123) dctn2 (ENSPREG00000008030) KIF5A (ENSPREG00000007937) SOAT2 (ENSPREG00000007854) igsf8 (ENSPREG00000007839) sp7 (ENSPREG00000007827) tarbp2 (ENSPREG00000007815) sp1 (ENSPREG00000007799) ENSPREG00000007784 PCBP2 (ENSPREG00000007742) MAP3K12 (ENSPREG00000007677) myg1 (ENSPREG00000007647) ENSPREG00000007608 Platyfish MODERN SPECIES 12 prelid3b (ENSXMAG00000006052) aurka (ENSXMAG00000006069) slc32a1 (ENSXMAG00000029858) ENSXMAG00000006086 ENSXMAG00000022069 ENSXMAG00000027745 PPP1R16B (ENSXMAG00000006109) fam210b (ENSXMAG00000006119) NDUFA4L2 (ENSXMAG00000023926) ENSXMAG00000021132 shmt2 (ENSXMAG00000006123) NXPH4 (ENSXMAG00000006151) R3HDM2 (ENSXMAG00000017978) INHBC (ENSXMAG00000023740) gli1 (ENSXMAG00000026676) ENSXMAG00000017955 ##22 ARHGAP9 (ENSXMAG00000017939) ##27 mars1 (ENSXMAG00000017920) ddit3 (ENSXMAG00000017918) dctn2 (ENSXMAG00000017906) KIF5A (ENSXMAG00000017874) soat2 (ENSXMAG00000017849) igsf8 (ENSXMAG00000017842) sp7 (ENSXMAG00000017840) tarbp2 (ENSXMAG00000017836) ENSXMAG00000028667 sp1 (ENSXMAG00000017829) ENSXMAG00000017826 PCBP2 (ENSXMAG00000023803) MAP3K12 (ENSXMAG00000017771) myg1 (ENSXMAG00000017759) NAME_4 ANCESTRAL SPECIES 14 ENSGT00390000008224 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Sheepshead minnow MODERN SPECIES 146 ipo9 (ENSCVAG00000008811) GNAS (ENSCVAG00000008844) ENSCVAG00000008856 prelid3b (ENSCVAG00000008866) aurka (ENSCVAG00000008888) slc32a1 (ENSCVAG00000008898) ARHGAP40 (ENSCVAG00000008907) PPP1R16B (ENSCVAG00000008916) fam210b (ENSCVAG00000008921) NDUFA4L2 (ENSCVAG00000008937) shmt2 (ENSCVAG00000008971) NXPH4 (ENSCVAG00000008977) R3HDM2 (ENSCVAG00000009058) INHBC (ENSCVAG00000009072) gli1 (ENSCVAG00000009092) ENSCVAG00000009111 ##22 ARHGAP9 (ENSCVAG00000009264) ##27 mars1 (ENSCVAG00000009314) ddit3 (ENSCVAG00000009326) dctn2 (ENSCVAG00000009660) KIF5A (ENSCVAG00000009711) soat2 (ENSCVAG00000009750) igsf8 (ENSCVAG00000009801) sp7 (ENSCVAG00000009812) tarbp2 (ENSCVAG00000009832) ENSCVAG00000009843 sp1 (ENSCVAG00000009861) ENSCVAG00000009873 PCBP2 (ENSCVAG00000009913) MAP3K12 (ENSCVAG00000010006) myg1 (ENSCVAG00000010043) Mummichog MODERN SPECIES 2262 NXPH4 (ENSFHEG00000016500) R3HDM2 (ENSFHEG00000016484) INHBC (ENSFHEG00000016441) gli1 (ENSFHEG00000016436) ENSFHEG00000016429 ##22 ARHGAP9 (ENSFHEG00000016423) ##27 mars1 (ENSFHEG00000016374) ddit3 (ENSFHEG00000016339) dctn2 (ENSFHEG00000016325) ENSFHEG00000016257 KIF5A (ENSFHEG00000016245) ENSFHEG00000016159 igsf8 (ENSFHEG00000016131) sp7 (ENSFHEG00000016121) tarbp2 (ENSFHEG00000016118) ENSFHEG00000016108 sp1 (ENSFHEG00000016071) ENSFHEG00000016043 PCBP2 (ENSFHEG00000016024) MAP3K12 (ENSFHEG00000015967) Ovalentaria_B ANCESTRAL SPECIES 5 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Cichlidae ANCESTRAL SPECIES 1 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00730000112701 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.a.a ENSGT00950000182883.b.a.b.a ENSGT00940000178807 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Pseudocrenilabrinae_A ANCESTRAL SPECIES 2 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.a.a ENSGT00950000182883.b.a.b.a ENSGT00940000178807 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Haplochromini ANCESTRAL SPECIES 1 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.a.a ENSGT00950000182883.b.a.b.a ENSGT00940000178807 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00390000002762.a.a.b.a.a.b ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a Burton s mouthbrooder MODERN SPECIES 379 ipo9 (ENSHBUG00000008849) ENSHBUG00000008870 prelid3b (ENSHBUG00000008888) GNAS (ENSHBUG00000008915) aurka (ENSHBUG00000008994) slc32a1 (ENSHBUG00000009015) ENSHBUG00000009062 PPP1R16B (ENSHBUG00000009098) fam210b (ENSHBUG00000009104) ENSHBUG00000009127 shmt2 (ENSHBUG00000009182) NXPH4 (ENSHBUG00000009189) R3HDM2 (ENSHBUG00000009227) INHBC (ENSHBUG00000009251) gli1 (ENSHBUG00000009262) ENSHBUG00000009297 ##22 ARHGAP9 (ENSHBUG00000009337) ##27 mars1 (ENSHBUG00000009575) ddit3 (ENSHBUG00000009592) dctn2 (ENSHBUG00000009631) Haplochromini_A ANCESTRAL SPECIES ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.a.a ENSGT00950000182883.b.a.b.a ENSGT00940000178807 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00390000002762.a.a.b.a.a.b ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a Haplochromini_B ANCESTRAL SPECIES ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a.a.a ENSGT00950000182883.b.a.b.a ENSGT00940000178807 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00390000002762.a.a.b.a.a.b ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a Eastern happy MODERN SPECIES 17 ENSACLG00000019638 prelid3b (ENSACLG00000019614) aurka (ENSACLG00000019599) ENSACLG00000019588 slc32a1 (ENSACLG00000019578) ENSACLG00000019415 PPP1R16B (ENSACLG00000019384) fam210b (ENSACLG00000019366) NDUFA4L2 (ENSACLG00000019341) shmt2 (ENSACLG00000019281) NXPH4 (ENSACLG00000019253) ENSACLG00000019220 R3HDM2 (ENSACLG00000019106) INHBC (ENSACLG00000019096) gli1 (ENSACLG00000019087) ENSACLG00000019042 ##22 ARHGAP9 (ENSACLG00000018988) ##27 mars1 (ENSACLG00000018937) ddit3 (ENSACLG00000018924) dctn2 (ENSACLG00000018818) KIF5A (ENSACLG00000018664) soat2 (ENSACLG00000018633) igsf8 (ENSACLG00000018604) sp7 (ENSACLG00000018596) tarbp2 (ENSACLG00000018569) ENSACLG00000018522 sp1 (ENSACLG00000018496) shmt2 (ENSACLG00000018445) ENSACLG00000018364 PCBP2 (ENSACLG00000018264) MAP3K12 (ENSACLG00000018145) P. nyererei MODERN SPECIES 391 LMOD1 (ENSPNYG00000013146) shisa4 (ENSPNYG00000013155) ipo9 (ENSPNYG00000013180) GNAS (ENSPNYG00000013223) slc32a1 (ENSPNYG00000013253) ENSPNYG00000013267 PPP1R16B (ENSPNYG00000013296) fam210b (ENSPNYG00000013310) NDUFA4L2 (ENSPNYG00000013325) shmt2 (ENSPNYG00000013372) NXPH4 (ENSPNYG00000013423) ENSPNYG00000013442 R3HDM2 (ENSPNYG00000013479) INHBC (ENSPNYG00000013538) gli1 (ENSPNYG00000013573) ENSPNYG00000013672 ##22 ARHGAP9 (ENSPNYG00000013692) ##27 mars1 (ENSPNYG00000013809) ddit3 (ENSPNYG00000013950) dctn2 (ENSPNYG00000013974) KIF5A (ENSPNYG00000014033) soat2 (ENSPNYG00000014076) igsf8 (ENSPNYG00000014093) sp7 (ENSPNYG00000014107) tarbp2 (ENSPNYG00000014125) ENSPNYG00000014134 sp1 (ENSPNYG00000014149) shmt2 (ENSPNYG00000014175) PCBP2 (ENSPNYG00000014206) MAP3K12 (ENSPNYG00000014244) myg1 (ENSPNYG00000014288) Nile tilapia MODERN SPECIES 17 GNAS (ENSONIG00000011493) ENSONIG00000011492 prelid3b (ENSONIG00000007211) aurka (ENSONIG00000011487) slc32a1 (ENSONIG00000035212) ENSONIG00000011482 PPP1R16B (ENSONIG00000029036) fam210b (ENSONIG00000039924) NDUFA4L2 (ENSONIG00000042525) shmt2 (ENSONIG00000005066) NXPH4 (ENSONIG00000038466) ENSONIG00000039606 R3HDM2 (ENSONIG00000005075) INHBC (ENSONIG00000043033) gli1 (ENSONIG00000005084) ENSONIG00000005086 ##22 ARHGAP9 (ENSONIG00000005088) ##27 mars1 (ENSONIG00000005090) ddit3 (ENSONIG00000041620) dctn2 (ENSONIG00000005094) KIF5A (ENSONIG00000005097) soat2 (ENSONIG00000005106) igsf8 (ENSONIG00000005111) sp7 (ENSONIG00000041473) tarbp2 (ENSONIG00000005115) ENSONIG00000039640 sp1 (ENSONIG00000005121) shmt2 (ENSONIG00000005123) ENSONIG00000005133 PCBP2 (ENSONIG00000005135) MAP3K12 (ENSONIG00000005141) Pomacentridae ANCESTRAL SPECIES 3 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Bicolor damselfish MODERN SPECIES 444 STAC3 (ENSSPAG00000022569) R3HDM2 (ENSSPAG00000022594) INHBC (ENSSPAG00000022630) gli1 (ENSSPAG00000022634) ENSSPAG00000022652 ##22 ARHGAP9 (ENSSPAG00000022667) ##27 mars1 (ENSSPAG00000022691) ddit3 (ENSSPAG00000022721) dctn2 (ENSSPAG00000022735) KIF5A (ENSSPAG00000022770) ENSSPAG00000022781 ENSSPAG00000022784 ENSSPAG00000022788 igsf8 (ENSSPAG00000022792) sp7 (ENSSPAG00000022795) tarbp2 (ENSSPAG00000022797) ENSSPAG00000022815 sp1 (ENSSPAG00000022826) PCBP2 (ENSSPAG00000022833) MAP3K12 (ENSSPAG00000022850) Pomacentridae_A ANCESTRAL SPECIES 38 ENSGT00940000156300.i ENSGT00940000159809 ENSGT00950000182810.A.a.a.a ENSGT00940000154900 ENSGT00490000043380.a ENSGT00940000162174 ENSGT00940000154090.b ENSGT00940000156134 ENSGT00940000161040.a ENSGT00390000002762.a.a.b.a ENSGT00950000182883.b.a.b.a ENSGT00950000183092.a.d.a ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.A.d ##22 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000157748 ENSGT00940000160763 ENSGT00940000157804 ENSGT00940000167008 ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 Spiny chromis MODERN SPECIES 2 ENSAPOG00000020733 prelid3b (ENSAPOG00000020710) aurka (ENSAPOG00000020667) slc32a1 (ENSAPOG00000020624) ENSAPOG00000020607 PPP1R16B (ENSAPOG00000020597) ENSAPOG00000020559 ENSAPOG00000020522 NDUFA4L2 (ENSAPOG00000020508) shmt2 (ENSAPOG00000020482) NXPH4 (ENSAPOG00000020416) STAC3 (ENSAPOG00000020406) R3HDM2 (ENSAPOG00000020341) INHBC (ENSAPOG00000020292) gli1 (ENSAPOG00000020275) ENSAPOG00000020264 ##22 ARHGAP9 (ENSAPOG00000020261) ##27 mars1 (ENSAPOG00000020238) ddit3 (ENSAPOG00000000573) dctn2 (ENSAPOG00000020120) KIF5A (ENSAPOG00000000570) soat2 (ENSAPOG00000019929) igsf8 (ENSAPOG00000019915) sp7 (ENSAPOG00000019907) tarbp2 (ENSAPOG00000019892) ENSAPOG00000019871 sp1 (ENSAPOG00000019854) ENSAPOG00000019841 PCBP2 (ENSAPOG00000019824) MAP3K12 (ENSAPOG00000019737) myg1 (ENSAPOG00000019681) Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 16 ENSHCOG00000015745 ENSHCOG00000015753 ENSHCOG00000015766 ENSHCOG00000015772 ENSHCOG00000015823 ENSHCOG00000015839 ENSHCOG00000015852 ENSHCOG00000015859 ENSHCOG00000015871 ENSHCOG00000015874 ENSHCOG00000015880 ENSHCOG00000015886 ENSHCOG00000015893 ENSHCOG00000015904 ENSHCOG00000015926 ENSHCOG00000015928 ##22 gtdc1 (ENSHCOG00000015942) #25 itgav (ENSHCOG00000000447) ENSHCOG00000000456 ENSHCOG00000016033 ENSHCOG00000016040 ENSHCOG00000016058 ENSHCOG00000016067 ENSHCOG00000016081 ENSHCOG00000016112 ENSHCOG00000016124 ENSHCOG00000016149 ENSHCOG00000016174 ENSHCOG00000016194 ENSHCOG00000016201 ENSHCOG00000016207 Tiger tail seahorse MODERN SPECIES 516 cish (ENSHCOG00000001216) twf2a (ENSHCOG00000001210) wdr82 (ENSHCOG00000001204) aurka (ENSHCOG00000001197) slc32a1 (ENSHCOG00000001194) slc32a1 (ENSHCOG00000001191) ARHGAP40 (ENSHCOG00000001187) PPP1R16B (ENSHCOG00000001179) ENSHCOG00000001172 shmt2 (ENSHCOG00000001169) NXPH4 (ENSHCOG00000001158) STAC3 (ENSHCOG00000001152) R3HDM2 (ENSHCOG00000001142) INHBC (ENSHCOG00000001128) gli1 (ENSHCOG00000001116) ENSHCOG00000001104 ##22 ARHGAP9 (ENSHCOG00000001098) ##27 mars1 (ENSHCOG00000001090) ddit3 (ENSHCOG00000001079) dctn2 (ENSHCOG00000001072) KIF5A (ENSHCOG00000001057) soat2 (ENSHCOG00000001042) igsf8 (ENSHCOG00000001034) sp7 (ENSHCOG00000001032) tarbp2 (ENSHCOG00000001027) ENSHCOG00000001023 sp1 (ENSHCOG00000001021) ENSHCOG00000001013 cbfa2t2 (ENSHCOG00000001009) ENSHCOG00000001005 SNTA1 (ENSHCOG00000001001) Cyclostomata DUPLICATION Cyclostomata ANCESTRAL SPECIES ENSGT00950000183208.A.a #22 Lamprey MODERN SPECIES 3074 ENSPMAG00000005009 #22 Hagfish MODERN SPECIES 784 ENSEBUG00000010823 ENSEBUG00000006093 ENSEBUG00000014563 ENSEBUG00000012354 abhd13 (ENSEBUG00000014577) ENSEBUG00000000441 ENSEBUG00000009098 KLHL10 (ENSEBUG00000004604) ENSEBUG00000007847 ENSEBUG00000015946 ENSEBUG00000014663 ENSEBUG00000010014 ENSEBUG00000016807 ENSEBUG00000007130 #22 Cyclostomata ANCESTRAL SPECIES ENSGT00950000183208.A.b #22 Hagfish MODERN SPECIES 390 ENSEBUG00000007485 ENSEBUG00000012738 ENSEBUG00000004701 GRB10 (ENSEBUG00000014223) fign (ENSEBUG00000000400) ENSEBUG00000011979 wdr12 (ENSEBUG00000013797) ENSEBUG00000004088 ENSEBUG00000013083 ENSEBUG00000017058 ENSEBUG00000005373 ZEB2 (ENSEBUG00000001421) #22 Lamprey DUPLICATION Lamprey MODERN SPECIES 2537 zeb2b (ENSPMAG00000003720) #22 Lamprey DUPLICATION Lamprey MODERN SPECIES 2985 ENSPMAG00000005091 #22 Lamprey MODERN SPECIES 2573 ENSPMAG00000008788 #22 ENSPMAG00000008792 ##27 Vertebrata ANCESTRAL SPECIES ENSGT00950000183208.B ##22 Gnathostomata ANCESTRAL SPECIES 450 ENSGT00940000156625 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 Elephant shark MODERN SPECIES 1627 ENSCMIG00000005850 ODAD2 (ENSCMIG00000005808) mpp7a (ENSCMIG00000005568) waca (ENSCMIG00000005308) bambia (ENSCMIG00000005260) ENSCMIG00000005259 MAP3K8 (ENSCMIG00000005225) MTPAP (ENSCMIG00000005214) JCAD (ENSCMIG00000005209) SVIL (ENSCMIG00000004390) ENSCMIG00000004130 zeb1b (ENSCMIG00000004120) ##22 arhgap12b (ENSCMIG00000004093) ##27 Euteleostomi ANCESTRAL SPECIES 2 ENSGT00550000074836 ENSGT00940000164060 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00940000177290 ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 ENSGT00940000155002.b ENSGT00940000157252 Sarcopterygii ANCESTRAL SPECIES ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000164060 ENSGT00940000158727 ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156232.b ENSGT00940000156625 ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00940000177290 ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00940000155002.b ENSGT00390000018381 ENSGT00940000157252 Tetrapoda ANCESTRAL SPECIES 7 ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000158727 ENSGT00940000164060 ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 ENSGT00940000155002.b ENSGT00940000157252 Amniota ANCESTRAL SPECIES 7 ENSGT00550000074836 ENSGT00940000164060 ENSGT00940000158727 ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000177290 ENSGT00940000154926 ENSGT00940000156952 ENSGT00980000202875 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 Sauria ANCESTRAL SPECIES 15 ENSGT00940000158727 ENSGT00940000157325.ab ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318 ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000177290 ENSGT00940000154926 ENSGT00970000198144 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 Archelosauria ANCESTRAL SPECIES 6 ENSGT00940000164060 ENSGT00940000158727 ENSGT00940000157325.ab ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00950000186242 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000177290 ENSGT00940000154926 ENSGT00940000156952.db.a ENSGT00970000198144 ENSGT00940000156952.eb ENSGT00940000156952.db.b ENSGT00940000154453.a.b.b ENSGT01090000260098.B Cryptodira ANCESTRAL SPECIES 4 ENSGT00940000158727 ENSGT00940000164060 ENSGT00940000164184.j ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000161810.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00950000186242 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000177290 ENSGT00940000154926 ENSGT00970000198144 ENSGT00940000156952.eb ENSGT00940000156952.db.b ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Testudinoidea ANCESTRAL SPECIES 8 ENSGT00940000158727 ENSGT00940000164060 ENSGT00940000164184.j ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000161810.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00950000186242 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000177290 ENSGT00940000154926 ENSGT00970000198144 ENSGT00940000156952.eb ENSGT00940000156952.db.b ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Emydidae ANCESTRAL SPECIES 35 ENSGT00940000158727 ENSGT00940000164184.j ENSGT00940000157325.ab ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000161810.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00950000186242 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00970000198144 ENSGT00940000156952.eb ENSGT00940000156952.db.b ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 painted turtle MODERN SPECIES 2396 ENSCPBG00000015836 ENSCPBG00000015837 ENSCPBG00000015839 MKX (ENSCPBG00000015841) ODAD2 (ENSCPBG00000015843) MPP7 (ENSCPBG00000015848) ENSCPBG00000015858 WAC (ENSCPBG00000015860) BAMBI (ENSCPBG00000015863) ENSCPBG00000015866 MAP3K8 (ENSCPBG00000015870) MTPAP (ENSCPBG00000015871) JCAD (ENSCPBG00000015875) SVIL (ENSCPBG00000015883) ZNF438 (ENSCPBG00000015900) ZEB1 (ENSCPBG00000015907) ##22 ARHGAP12 (ENSCPBG00000015937) ##27 KIF5B (ENSCPBG00000016997) EPC1 (ENSCPBG00000017001) ENSCPBG00000017004 ITGB1 (ENSCPBG00000017007) NRP1 (ENSCPBG00000017014) PARD3 (ENSCPBG00000017023) CUL2 (ENSCPBG00000017029) ENSCPBG00000017033 CREM (ENSCPBG00000017034) ENSCPBG00000017036 ENSCPBG00000017037 CCNY (ENSCPBG00000017038) GJD4 (ENSCPBG00000017039) FZD8 (ENSCPBG00000017040) Three-toed box turtle MODERN SPECIES 48 RAB18 (ENSTMTG00000002703) MKX (ENSTMTG00000002692) ODAD2 (ENSTMTG00000002683) MPP7 (ENSTMTG00000002433) ENSTMTG00000002400 WAC (ENSTMTG00000002392) BAMBI (ENSTMTG00000002388) ENSTMTG00000002383 ENSTMTG00000002380 MAP3K8 (ENSTMTG00000002371) MTPAP (ENSTMTG00000002363) JCAD (ENSTMTG00000002361) SVIL (ENSTMTG00000001985) ZNF438 (ENSTMTG00000001882) ZEB1 (ENSTMTG00000001875) ##22 ARHGAP12 (ENSTMTG00000001852) ##27 KIF5B (ENSTMTG00000001826) EPC1 (ENSTMTG00000001797) ENSTMTG00000001787 ITGB1 (ENSTMTG00000001774) ENSTMTG00000001762 NRP1 (ENSTMTG00000001646) PARD3 (ENSTMTG00000001509) CUL2 (ENSTMTG00000001447) CREM (ENSTMTG00000001417) CCNY (ENSTMTG00000001403) GJD4 (ENSTMTG00000001395) FZD8 (ENSTMTG00000001388) ENSTMTG00000001386 KLF6 (ENSTMTG00000001378) Testudinidae ANCESTRAL SPECIES 1 ENSGT00940000164060 ENSGT00940000158727 ENSGT00940000164184.j ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000161810.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00960000191563 ENSGT00950000183214.a.b.a.a ENSGT00940000177290 ENSGT00940000154926 ENSGT00940000156952.eb ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 Goode s thornscrub tortoise MODERN SPECIES 11 ENSGEVG00005019570 ENSGEVG00005019560 MKX (ENSGEVG00005019550) ODAD2 (ENSGEVG00005019530) MPP7 (ENSGEVG00005019479) ENSGEVG00005019469 WAC (ENSGEVG00005019454) BAMBI (ENSGEVG00005019449) ENSGEVG00005019444 ENSGEVG00005019436 MAP3K8 (ENSGEVG00005019426) MTPAP (ENSGEVG00005019418) JCAD (ENSGEVG00005019406) SVIL (ENSGEVG00005019004) ZNF438 (ENSGEVG00005018806) ZEB1 (ENSGEVG00005018786) ##22 ARHGAP12 (ENSGEVG00005018703) ##27 KIF5B (ENSGEVG00005018651) EPC1 (ENSGEVG00005018600) ITGB1 (ENSGEVG00005018507) NRP1 (ENSGEVG00005018435) ENSGEVG00005018402 ENSGEVG00005018372 PARD3 (ENSGEVG00005018273) ENSGEVG00005018242 CUL2 (ENSGEVG00005018149) CREM (ENSGEVG00005018082) CCNY (ENSGEVG00005018033) GJD4 (ENSGEVG00005018001) FZD8 (ENSGEVG00005017951) ENSGEVG00005017918 Abingdon island giant tortoise MODERN SPECIES 2078 ZEB1 (ENSCABG00000003816) ##22 ARHGAP12 (ENSCABG00000003517) ##27 KIF5B (ENSCABG00000003486) EPC1 (ENSCABG00000003476) ITGB1 (ENSCABG00000003108) Chinese turtle MODERN SPECIES 81 ENSPSIG00000014548 MAP3K8 (ENSPSIG00000015241) MTPAP (ENSPSIG00000015809) JCAD (ENSPSIG00000016161) SVIL (ENSPSIG00000016175) ZNF438 (ENSPSIG00000008838) ZEB1 (ENSPSIG00000009469) ##22 ENSPSIG00000010270 INO80C (ENSPSIG00000010372) Archosauria ANCESTRAL SPECIES ENSGT00940000164060 ENSGT00940000158727 ENSGT00940000157325.ab ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT01060000251629 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00950000186242 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952.db.a ENSGT00940000156952.eb ENSGT00940000156952.db.b ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Australian saltwater crocodile MODERN SPECIES MKX (ENSCPRG00005008242) ODAD2 (ENSCPRG00005008226) MPP7 (ENSCPRG00005008160) ENSCPRG00005008116 ENSCPRG00005008115 WAC (ENSCPRG00005008077) BAMBI (ENSCPRG00005008013) ENSCPRG00005007920 MAP3K8 (ENSCPRG00005007912) MTPAP (ENSCPRG00005007911) JCAD (ENSCPRG00005007878) SVIL (ENSCPRG00005007743) ENSCPRG00005007717 ZNF438 (ENSCPRG00005007706) ENSCPRG00005007679 ZEB1 (ENSCPRG00005007625) ##22 ARHGAP12 (ENSCPRG00005007600) ##27 ENSCPRG00005007571 KIF5B (ENSCPRG00005007550) EPC1 (ENSCPRG00005007478) ENSCPRG00005007472 ITGB1 (ENSCPRG00005007200) NRP1 (ENSCPRG00005007141) PARD3 (ENSCPRG00005007056) CUL2 (ENSCPRG00005006939) CREM (ENSCPRG00005006937) CCNY (ENSCPRG00005006903) GJD4 (ENSCPRG00005006901) KLF6 (ENSCPRG00005006874) PITRM1 (ENSCPRG00005006821) PFKP (ENSCPRG00005006774) Aves ANCESTRAL SPECIES 5 ENSGT00940000164060 ENSGT00940000164184.j ENSGT00940000157325.ab ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT01060000251629 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952.db.a ENSGT00940000156952.eb ENSGT00940000156952.db.b ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 African ostrich MODERN SPECIES 770 PTCHD3 (ENSSCUG00000014782) ENSSCUG00000014784 ENSSCUG00000014789 MKX (ENSSCUG00000014797) ODAD2 (ENSSCUG00000014809) MPP7 (ENSSCUG00000014819) SSNA1 (ENSSCUG00000014828) WAC (ENSSCUG00000014832) BAMBI (ENSSCUG00000014839) ENSSCUG00000014843 MAP3K8 (ENSSCUG00000014851) MTPAP (ENSSCUG00000014864) JCAD (ENSSCUG00000014872) SVIL (ENSSCUG00000014941) ZNF438 (ENSSCUG00000015040) ZEB1 (ENSSCUG00000015057) ##22 ARHGAP12 (ENSSCUG00000015067) ##27 KIF5B (ENSSCUG00000015078) EPC1 (ENSSCUG00000015085) EPDR1 (ENSSCUG00000015090) NME8 (ENSSCUG00000015096) ENSSCUG00000015122 ENSSCUG00000015129 ENSSCUG00000015130 ELMO1 (ENSSCUG00000015171) AOAH (ENSSCUG00000015223) ANLN (ENSSCUG00000015250) MATCAP2 (ENSSCUG00000015277) EEPD1 (ENSSCUG00000015294) SEPTIN7 (ENSSCUG00000015303) HERPUD2 (ENSSCUG00000015322) Neognathae ANCESTRAL SPECIES ENSGT00940000164060 ENSGT00940000164184.j ENSGT00940000157325.ab ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT01060000251629 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952.db.a ENSGT00940000156952.db.b ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 Neognathae_b ANCESTRAL SPECIES 9 ENSGT00940000158727 ENSGT00940000164060 ENSGT00940000157325.ab ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952.db.a ENSGT00940000156952.db.b ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 ENSGT00940000155002.b Neognathae_c ANCESTRAL SPECIES 12 ENSGT00940000158727 ENSGT00940000164060 ENSGT00940000157325.ab ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952.db.a ENSGT00940000156952.db.b ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 ENSGT00940000155002.b Golden eagle MODERN SPECIES 19 ENSACCG00020000712 RAB18 (ENSACCG00020000738) MKX (ENSACCG00020000791) ODAD2 (ENSACCG00020000822) MPP7 (ENSACCG00020000872) ENSACCG00020000899 ENSACCG00020000912 WAC (ENSACCG00020000927) BAMBI (ENSACCG00020000946) ENSACCG00020000964 MAP3K8 (ENSACCG00020000983) MTPAP (ENSACCG00020001006) JCAD (ENSACCG00020001038) SVIL (ENSACCG00020001120) ZNF438 (ENSACCG00020001272) ZEB1 (ENSACCG00020001292) ##22 ARHGAP12 (ENSACCG00020001342) ##27 KIF5B (ENSACCG00020001424) EPC1 (ENSACCG00020001467) ITGB1 (ENSACCG00020001510) NRP1 (ENSACCG00020001565) PARD3 (ENSACCG00020001653) CUL2 (ENSACCG00020001735) ENSACCG00020001772 ENSACCG00020001781 CCNY (ENSACCG00020001797) GJD4 (ENSACCG00020001820) FZD8 (ENSACCG00020001840) KLF6 (ENSACCG00020001863) PITRM1 (ENSACCG00020001886) PFKP (ENSACCG00020001932) Kakapo MODERN SPECIES YME1L1 (ENSSHBG00005000436) PTCHD3 (ENSSHBG00005000435) ENSSHBG00005000431 RAB18 (ENSSHBG00005019840) MKX (ENSSHBG00005019839) ODAD2 (ENSSHBG00005019838) MPP7 (ENSSHBG00005019837) ENSSHBG00005019835 WAC (ENSSHBG00005019834) BAMBI (ENSSHBG00005019833) MAP3K8 (ENSSHBG00005019830) MTPAP (ENSSHBG00005019826) JCAD (ENSSHBG00005019823) SVIL (ENSSHBG00005019779) ZNF438 (ENSSHBG00005019742) ZEB1 (ENSSHBG00005019729) ##22 ARHGAP12 (ENSSHBG00005019724) ##27 KIF5B (ENSSHBG00005019694) EPC1 (ENSSHBG00005019681) ITGB1 (ENSSHBG00005019673) NRP1 (ENSSHBG00005019666) PARD3 (ENSSHBG00005015070) CUL2 (ENSSHBG00005014670) ENSSHBG00005014661 ENSSHBG00005014651 CCNY (ENSSHBG00005014639) GJD4 (ENSSHBG00005014630) FZD8 (ENSSHBG00005014625) KLF6 (ENSSHBG00005014604) PITRM1 (ENSSHBG00005014591) PFKP (ENSSHBG00005014573) Passeriformes ANCESTRAL SPECIES ENSGT00550000074836 ENSGT00940000158727 ENSGT00940000164060 ENSGT00940000157325.ab ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952.eb ENSGT00940000156952.db.b ENSGT00940000156952.db.a ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 Passeriformes_d ANCESTRAL SPECIES ENSGT00550000074836 ENSGT00940000158727 ENSGT00940000164060 ENSGT00940000157325.ab ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926.n ENSGT00940000156952.eb ENSGT00940000156952.db.b ENSGT00940000154926.m ENSGT00940000156952.db.a ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 Flycatcher MODERN SPECIES 11 ENSFALG00000007183 YME1L1 (ENSFALG00000007172) PTCHD3 (ENSFALG00000007166) RAB18 (ENSFALG00000026033) MKX (ENSFALG00000007156) ODAD2 (ENSFALG00000007152) MPP7 (ENSFALG00000007147) ENSFALG00000027856 WAC (ENSFALG00000007145) BAMBI (ENSFALG00000007141) MAP3K8 (ENSFALG00000007135) MTPAP (ENSFALG00000007132) JCAD (ENSFALG00000007127) SVIL (ENSFALG00000007124) ZNF438 (ENSFALG00000007122) ZEB1 (ENSFALG00000007118) ##22 ENSFALG00000028512 ARHGAP12 (ENSFALG00000007115) ##27 KIF5B (ENSFALG00000007112) EPC1 (ENSFALG00000007109) ITGB1 (ENSFALG00000007106) NRP1 (ENSFALG00000007080) PARD3 (ENSFALG00000007053) CUL2 (ENSFALG00000007038) CREM (ENSFALG00000007036) ENSFALG00000024739 CCNY (ENSFALG00000026454) ENSFALG00000026439 FZD8 (ENSFALG00000007019) ENSFALG00000026450 KLF6 (ENSFALG00000025793) Passeriformes_g ANCESTRAL SPECIES 6 ENSGT00550000074836 ENSGT00940000158727 ENSGT00940000164060 ENSGT00940000157325.ab ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926.n ENSGT00940000156952.db.b ENSGT00940000154926.m ENSGT00940000156952.db.a ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 Medium ground finch MODERN SPECIES 63 YME1L1 (ENSGFOG00000014388) ENSGFOG00000014451 ENSGFOG00000014452 RAB18 (ENSGFOG00000014453) MKX (ENSGFOG00000014454) ODAD2 (ENSGFOG00000014457) MPP7 (ENSGFOG00000014461) ENSGFOG00000014465 WAC (ENSGFOG00000014467) BAMBI (ENSGFOG00000014468) MAP3K8 (ENSGFOG00000014470) MTPAP (ENSGFOG00000014474) JCAD (ENSGFOG00000014479) SVIL (ENSGFOG00000014483) ZNF438 (ENSGFOG00000014523) ZEB1 (ENSGFOG00000014526) ##22 ARHGAP12 (ENSGFOG00000014529) ##27 KIF5B (ENSGFOG00000014539) EPC1 (ENSGFOG00000014542) ITGB1 (ENSGFOG00000014545) NRP1 (ENSGFOG00000014549) PARD3 (ENSGFOG00000014566) ENSGFOG00000014593 Passeroidea ANCESTRAL SPECIES 6 ENSGT00550000074836 ENSGT00940000158727 ENSGT00940000164060 ENSGT00940000157325.ab ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926.n ENSGT00940000156952.eb ENSGT00940000156952.db.a ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 ENSGT00940000155002.b Zebra finch MODERN SPECIES 12 PTCHD3 (ENSTGUG00000001113) ENSTGUG00000001111 RAB18 (ENSTGUG00000024739) MKX (ENSTGUG00000001094) ODAD2 (ENSTGUG00000001101) MPP7 (ENSTGUG00000001078) ENSTGUG00000026624 WAC (ENSTGUG00000001068) BAMBI (ENSTGUG00000001062) MAP3K8 (ENSTGUG00000001055) MTPAP (ENSTGUG00000001048) JCAD (ENSTGUG00000001046) SVIL (ENSTGUG00000001028) ENSTGUG00000026897 ZNF438 (ENSTGUG00000001026) ZEB1 (ENSTGUG00000001020) ##22 ARHGAP12 (ENSTGUG00000001011) ##27 KIF5B (ENSTGUG00000000998) EPC1 (ENSTGUG00000000995) ITGB1 (ENSTGUG00000000968) ENSTGUG00000018801 NRP1 (ENSTGUG00000000947) PARD3 (ENSTGUG00000000932) CUL2 (ENSTGUG00000000924) ENSTGUG00000024025 ENSTGUG00000026283 ENSTGUG00000025735 CCNY (ENSTGUG00000000913) GJD4 (ENSTGUG00000000912) FZD8 (ENSTGUG00000000910) ENSTGUG00000028959 Common canary MODERN SPECIES 5 MASTL (ENSSCAG00000009550) YME1L1 (ENSSCAG00000009065) PTCHD3 (ENSSCAG00000008993) RAB18 (ENSSCAG00000008984) MKX (ENSSCAG00000008967) ODAD2 (ENSSCAG00000008955) MPP7 (ENSSCAG00000008935) ENSSCAG00000008921 WAC (ENSSCAG00000008917) BAMBI (ENSSCAG00000008914) MAP3K8 (ENSSCAG00000008907) MTPAP (ENSSCAG00000008898) JCAD (ENSSCAG00000008886) SVIL (ENSSCAG00000008834) ZNF438 (ENSSCAG00000008796) ZEB1 (ENSSCAG00000008774) ##22 ARHGAP12 (ENSSCAG00000008745) ##27 KIF5B (ENSSCAG00000008682) EPC1 (ENSSCAG00000008673) ITGB1 (ENSSCAG00000008593) NRP1 (ENSSCAG00000008562) PARD3 (ENSSCAG00000008497) CUL2 (ENSSCAG00000008479) CREM (ENSSCAG00000008465) ENSSCAG00000008453 CCNY (ENSSCAG00000008442) GJD4 (ENSSCAG00000008441) KLF6 (ENSSCAG00000008435) PITRM1 (ENSSCAG00000008430) PFKP (ENSSCAG00000008420) ADARB2 (ENSSCAG00000008403) Great tit MODERN SPECIES 11 YME1L1 (ENSPMJG00000006156) PTCHD3 (ENSPMJG00000006153) ENSPMJG00000006151 RAB18 (ENSPMJG00000006149) MKX (ENSPMJG00000006148) ODAD2 (ENSPMJG00000006117) MPP7 (ENSPMJG00000006103) ENSPMJG00000006011 WAC (ENSPMJG00000006002) BAMBI (ENSPMJG00000005997) MAP3K8 (ENSPMJG00000005969) MTPAP (ENSPMJG00000005965) JCAD (ENSPMJG00000005944) SVIL (ENSPMJG00000005935) ZNF438 (ENSPMJG00000005931) ZEB1 (ENSPMJG00000005929) ##22 ARHGAP12 (ENSPMJG00000005909) ##27 KIF5B (ENSPMJG00000005827) ENSPMJG00000005824 EPC1 (ENSPMJG00000005808) ITGB1 (ENSPMJG00000005793) NRP1 (ENSPMJG00000005742) PARD3 (ENSPMJG00000005687) CUL2 (ENSPMJG00000005644) CREM (ENSPMJG00000005641) ENSPMJG00000005640 CCNY (ENSPMJG00000005639) GJD4 (ENSPMJG00000005627) FZD8 (ENSPMJG00000005624) KLF6 (ENSPMJG00000005600) PITRM1 (ENSPMJG00000005589) Galloanserae ANCESTRAL SPECIES ENSGT00550000074836 ENSGT00940000158727 ENSGT00940000164060 ENSGT00940000164184.j ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT01060000251629 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952.db.b ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 ENSGT00940000155002.b Anatidae ANCESTRAL SPECIES 1 ENSGT00550000074836 ENSGT00940000158727 ENSGT00940000164060 ENSGT00940000164184.j ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT01060000251629 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952.db.b ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 ENSGT00940000155002.b Pink-footed goose MODERN SPECIES 30 YME1L1 (ENSABRG00000002314) PTCHD3 (ENSABRG00000002304) ENSABRG00000002281 ENSABRG00000002254 MKX (ENSABRG00000002222) ODAD2 (ENSABRG00000002137) MPP7 (ENSABRG00000001975) ENSABRG00000001930 WAC (ENSABRG00000001904) BAMBI (ENSABRG00000001894) MAP3K8 (ENSABRG00000001831) MTPAP (ENSABRG00000001804) JCAD (ENSABRG00000001776) SVIL (ENSABRG00000001474) ZNF438 (ENSABRG00000001445) ZEB1 (ENSABRG00000001400) ##22 ENSABRG00000001376 ARHGAP12 (ENSABRG00000001246) ##27 ENSABRG00000001166 KIF5B (ENSABRG00000001110) EPC1 (ENSABRG00000000910) ITGB1 (ENSABRG00000000866) NRP1 (ENSABRG00000000753) PARD3 (ENSABRG00000000612) CUL2 (ENSABRG00000000498) CREM (ENSABRG00000000405) CCNY (ENSABRG00000000363) GJD4 (ENSABRG00000000343) FZD8 (ENSABRG00000018469) Duck MODERN SPECIES 10 MASTL (ENSAPLG00000012632) YME1L1 (ENSAPLG00000012942) PTCHD3 (ENSAPLG00000013648) ENSAPLG00000029634 MKX (ENSAPLG00000010674) ODAD2 (ENSAPLG00000010322) MPP7 (ENSAPLG00000009795) ENSAPLG00000022680 WAC (ENSAPLG00000009527) BAMBI (ENSAPLG00000009484) MAP3K8 (ENSAPLG00000009205) MTPAP (ENSAPLG00000008962) JCAD (ENSAPLG00000006380) SVIL (ENSAPLG00000006418) ZNF438 (ENSAPLG00000007479) ZEB1 (ENSAPLG00000007482) ##22 ENSAPLG00000027011 ARHGAP12 (ENSAPLG00000007667) ##27 KIF5B (ENSAPLG00000008099) EPC1 (ENSAPLG00000008897) ITGB1 (ENSAPLG00000009293) NRP1 (ENSAPLG00000003623) PARD3 (ENSAPLG00000014767) CUL2 (ENSAPLG00000014251) CREM (ENSAPLG00000013843) CCNY (ENSAPLG00000013783) GJD4 (ENSAPLG00000013760) FZD8 (ENSAPLG00000017523) ENSAPLG00000022948 KLF6 (ENSAPLG00000029541) PITRM1 (ENSAPLG00000013443) Phasianidae DUPLICATION Phasianidae ANCESTRAL SPECIES 1 ENSGT00940000158727 ENSGT00940000164060.c ENSGT00940000164184.j ENSGT00940000157325.ab ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.a ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952.db.b ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 ENSGT00940000155002.b ENSGT00940000157252 Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00550000074836 ENSGT00940000158727 ENSGT00940000164060.c ENSGT00940000164184.j ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.a ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000155408.a ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 ENSGT00940000155002.b.y ENSGT00940000157252 Turkey MODERN SPECIES 26 ENSMGAG00000005821 ENSMGAG00000018074 ENSMGAG00000022060 ENSMGAG00000005858 ENSMGAG00000017787 ENSMGAG00000005873 ENSMGAG00000005916 ENSMGAG00000006001 ENSMGAG00000006119 ENSMGAG00000019268 ENSMGAG00000006246 ENSMGAG00000017804 ENSMGAG00000006301 ENSMGAG00000006267 ##27 ENSMGAG00000018858 ##22 ENSMGAG00000006355 ##22 ENSMGAG00000006408 ENSMGAG00000018711 ENSMGAG00000006415 ENSMGAG00000006517 ENSMGAG00000006533 ENSMGAG00000006563 ENSMGAG00000006573 ENSMGAG00000006606 ENSMGAG00000006609 ENSMGAG00000006643 ENSMGAG00000006668 ENSMGAG00000006673 ENSMGAG00000022744 ENSMGAG00000021839 ENSMGAG00000018816 Chicken MODERN SPECIES 11 ENSGALG00010005304 ENSGALG00010005301 ENSGALG00010005295 RAB18 (ENSGALG00010004673) MKX (ENSGALG00010005497) ODAD2 (ENSGALG00010005299) MPP7 (ENSGALG00010005285) SSNA1 (ENSGALG00010005208) WAC (ENSGALG00010005180) BAMBI (ENSGALG00010005176) MAP3K8 (ENSGALG00010004987) MTPAP (ENSGALG00010004974) JCAD (ENSGALG00010004965) SVIL (ENSGALG00010004935) ZNF438 (ENSGALG00010004342) ZEB1 (ENSGALG00010004855) ##22 ARHGAP12 (ENSGALG00010005757) ##27 KIF5B (ENSGALG00010005695) EPC1 (ENSGALG00010005681) ITGB1 (ENSGALG00010005632) NRP1 (ENSGALG00010005629) PARD3 (ENSGALG00010005596) CUL2 (ENSGALG00010004507) CREM (ENSGALG00010004425) CCNY (ENSGALG00010004394) GJD4 (ENSGALG00010004368) FZD8 (ENSGALG00010006285) KLF6 (ENSGALG00010005493) PITRM1 (ENSGALG00010005485) PFKP (ENSGALG00010005472) ADARB2 (ENSGALG00010004275) Japanese quail MODERN SPECIES 11 ENSCJPG00005003886 ENSCJPG00005003885 ENSCJPG00005003882 RAB18 (ENSCJPG00005003880) MKX (ENSCJPG00005003877) ODAD2 (ENSCJPG00005003873) MPP7 (ENSCJPG00005003790) ENSCJPG00005003788 WAC (ENSCJPG00005003784) BAMBI (ENSCJPG00005003754) MAP3K8 (ENSCJPG00005003713) MTPAP (ENSCJPG00005003710) JCAD (ENSCJPG00005003698) SVIL (ENSCJPG00005003642) ZNF438 (ENSCJPG00005003619) ZEB1 (ENSCJPG00005003613) ##22 ARHGAP12 (ENSCJPG00005003588) ##27 KIF5B (ENSCJPG00005003582) EPC1 (ENSCJPG00005003384) ITGB1 (ENSCJPG00005003352) NRP1 (ENSCJPG00005003347) PARD3 (ENSCJPG00005003341) ENSCJPG00005003339 CUL2 (ENSCJPG00005003335) CREM (ENSCJPG00005003332) CCNY (ENSCJPG00005003331) GJD4 (ENSCJPG00005003330) FZD8 (ENSCJPG00005003329) KLF6 (ENSCJPG00005003316) PITRM1 (ENSCJPG00005003312) PFKP (ENSCJPG00005003311) Phasianidae ANCESTRAL SPECIES ENSGT00950000183208.B.b ##22 Phasianidae_b ANCESTRAL SPECIES ENSGT00950000183208.B.b ##22 Turkey MODERN SPECIES 26 ENSMGAG00000005809 ENSMGAG00000005821 ENSMGAG00000018074 ENSMGAG00000022060 ENSMGAG00000005858 ENSMGAG00000017787 ENSMGAG00000005873 ENSMGAG00000005916 ENSMGAG00000006001 ENSMGAG00000006119 ENSMGAG00000019268 ENSMGAG00000006246 ENSMGAG00000017804 ENSMGAG00000006301 ENSMGAG00000006267 ##27 ENSMGAG00000018858 ##22 ENSMGAG00000006355 ##22 ENSMGAG00000006408 ENSMGAG00000018711 ENSMGAG00000006415 ENSMGAG00000006517 ENSMGAG00000006533 ENSMGAG00000006563 ENSMGAG00000006573 ENSMGAG00000006606 ENSMGAG00000006609 ENSMGAG00000006643 ENSMGAG00000006668 ENSMGAG00000006673 ENSMGAG00000022744 ENSMGAG00000021839 Lepidosauria ANCESTRAL SPECIES 5 ENSGT00550000074836 ENSGT00940000164060 ENSGT00940000158727 ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318 ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000177290 ENSGT00940000154926 ENSGT00970000198144 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 tuatara MODERN SPECIES 165 SVIL (ENSSPUG00000004890) ZNF438 (ENSSPUG00000004919) ZEB1 (ENSSPUG00000004934) ##22 ARHGAP12 (ENSSPUG00000005019) ##27 KIF5B (ENSSPUG00000005599) EPC1 (ENSSPUG00000005725) ITGB1 (ENSSPUG00000005772) NRP1 (ENSSPUG00000005847) Episquamata ANCESTRAL SPECIES 5 ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000164060.i ENSGT00940000158727.y.a.a ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318 ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926.k.a ENSGT00970000198144 ENSGT00940000154926.l ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B.f ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 Toxicofera ANCESTRAL SPECIES 4 ENSGT00940000156350 ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000158727.y.a.a ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318 ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926.k.a ENSGT00970000198144 ENSGT00940000154926.l ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B.f ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 Elapidae ANCESTRAL SPECIES 24 ENSGT00940000156350 ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000158727.y.a.a ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318 ENSGT00440000037780.a.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653.ie ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801.g ENSGT00940000155003.e.a.mb.a.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926.k.a ENSGT00970000198144 ENSGT00940000154926.l ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B.f ENSGT00940000161191.A ENSGT00940000158085.c ENSGT00390000018381 Indian cobra MODERN SPECIES 337 ACBD5 (ENSNNAG00000016997) MASTL (ENSNNAG00000016931) YME1L1 (ENSNNAG00000016893) PTCHD3 (ENSNNAG00000016883) ENSNNAG00000016872 MKX (ENSNNAG00000016851) ODAD2 (ENSNNAG00000016821) MPP7 (ENSNNAG00000016775) ENSNNAG00000016770 ENSNNAG00000016742 BAMBI (ENSNNAG00000016735) MAP3K8 (ENSNNAG00000016730) MTPAP (ENSNNAG00000016717) ENSNNAG00000016710 SVIL (ENSNNAG00000016549) ZEB1 (ENSNNAG00000016526) ##22 ARHGAP12 (ENSNNAG00000016107) ##27 KIF5B (ENSNNAG00000013928) ENSNNAG00000013692 ITGB1 (ENSNNAG00000013620) NRP1 (ENSNNAG00000013597) PARD3 (ENSNNAG00000012907) CUL2 (ENSNNAG00000012733) ENSNNAG00000012700 CREM (ENSNNAG00000012675) ENSNNAG00000012661 CCNY (ENSNNAG00000012611) GJD4 (ENSNNAG00000012585) ENSNNAG00000012544 KLF6 (ENSNNAG00000012527) PITRM1 (ENSNNAG00000008918) Elapidae_a ANCESTRAL SPECIES 80 ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000158727.y.a.a ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.h ENSGT00940000156232.b.g ENSGT00390000012318 ENSGT00440000037780.a.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653.ie ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801.g ENSGT00940000155003.e.a.mb.a.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926.k.a ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B.f ENSGT00940000161191.A ENSGT00940000158085.c ENSGT00390000018381 ENSGT00940000155002.b ENSGT00940000157252.k Acanthophiinae ANCESTRAL SPECIES 76 ENSGT00940000156350 ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000158727.y.a.a ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.h ENSGT00390000012318 ENSGT00440000037780.a.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653.ie ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801.g ENSGT00940000155003.e.a.mb.a.a ENSGT00960000189805.a.b ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926.k.a ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B.f ENSGT00940000161191.A ENSGT00940000158085.c ENSGT00390000018381 ENSGT00940000155002.b Mainland tiger snake MODERN SPECIES 42 ACBD5 (ENSNSUG00000000954) MASTL (ENSNSUG00000000974) YME1L1 (ENSNSUG00000001034) ENSNSUG00000001346 ENSNSUG00000001349 MKX (ENSNSUG00000001351) ODAD2 (ENSNSUG00000001359) MPP7 (ENSNSUG00000001365) ENSNSUG00000001391 ENSNSUG00000001400 BAMBI (ENSNSUG00000001834) MAP3K8 (ENSNSUG00000001835) MTPAP (ENSNSUG00000001838) JCAD (ENSNSUG00000001843) SVIL (ENSNSUG00000001846) ZEB1 (ENSNSUG00000001867) ##22 ARHGAP12 (ENSNSUG00000001873) ##27 ENSNSUG00000001878 ENSNSUG00000001886 ENSNSUG00000001946 ITGB1 (ENSNSUG00000001955) NRP1 (ENSNSUG00000002806) PARD3 (ENSNSUG00000002834) ENSNSUG00000006712 CREM (ENSNSUG00000007060) CCNY (ENSNSUG00000007061) GJD4 (ENSNSUG00000007062) FZD8 (ENSNSUG00000007064) KLF6 (ENSNSUG00000007065) PITRM1 (ENSNSUG00000007068) ENSNSUG00000007167 Eastern brown snake MODERN SPECIES 45 MASTL (ENSPTXG00000007176) YME1L1 (ENSPTXG00000007177) PTCHD3 (ENSPTXG00000007178) ENSPTXG00000007180 MKX (ENSPTXG00000007181) ODAD2 (ENSPTXG00000007182) MPP7 (ENSPTXG00000007183) ENSPTXG00000007184 ENSPTXG00000007186 BAMBI (ENSPTXG00000007189) MAP3K8 (ENSPTXG00000007191) MTPAP (ENSPTXG00000007193) ENSPTXG00000007195 JCAD (ENSPTXG00000007196) SVIL (ENSPTXG00000007208) ZEB1 (ENSPTXG00000007300) ##22 ARHGAP12 (ENSPTXG00000007301) ##27 KIF5B (ENSPTXG00000007303) ENSPTXG00000007308 ENSPTXG00000007311 ITGB1 (ENSPTXG00000007313) NRP1 (ENSPTXG00000007316) PARD3 (ENSPTXG00000007318) ENSPTXG00000007320 ENSPTXG00000007322 ENSPTXG00000007323 CCNY (ENSPTXG00000007324) GJD4 (ENSPTXG00000007325) FZD8 (ENSPTXG00000007326) ENSPTXG00000007327 ENSPTXG00000007328 Blue-lipped sea krait MODERN SPECIES 1962 ENSLLTG00000010032 ##22 Lizard MODERN SPECIES 5 ENSACAG00000043296 ENSACAG00000043629 MKX (ENSACAG00000007829) ODAD2 (ENSACAG00000007785) MPP7 (ENSACAG00000007649) ENSACAG00000007648 ENSACAG00000036651 WAC (ENSACAG00000007583) BAMBI (ENSACAG00000007580) MAP3K8 (ENSACAG00000007522) MTPAP (ENSACAG00000007513) ENSACAG00000036235 JCAD (ENSACAG00000007512) SVIL (ENSACAG00000007423) ENSACAG00000039306 ZEB1 (ENSACAG00000007353) ##22 ARHGAP12 (ENSACAG00000007253) ##27 KIF5B (ENSACAG00000007071) EPC1 (ENSACAG00000007015) ITGB1 (ENSACAG00000006788) ENSACAG00000036832 NRP1 (ENSACAG00000006518) ENSACAG00000042788 PARD3 (ENSACAG00000000686) CUL2 (ENSACAG00000000628) ENSACAG00000036748 CREM (ENSACAG00000000947) ENSACAG00000040462 CCNY (ENSACAG00000001075) GJD4 (ENSACAG00000042212) FZD8 (ENSACAG00000001137) Laterata ANCESTRAL SPECIES 10 ENSGT00940000164060.i ENSGT00940000158727.y.a.a ENSGT00940000158727.y.a.b.a ENSGT00940000158727.y.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00390000012318 ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926.k.a ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B.f ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 ENSGT00940000155002.b ENSGT00940000157252 Argentine black and white tegu MODERN SPECIES 5 ENSSMRG00000014229 ENSSMRG00000014230 ENSSMRG00000014231 ENSSMRG00000014232 ENSSMRG00000014233 MKX (ENSSMRG00000014234) ODAD2 (ENSSMRG00000014235) MPP7 (ENSSMRG00000014236) ENSSMRG00000014237 WAC (ENSSMRG00000014238) BAMBI (ENSSMRG00000014241) MAP3K8 (ENSSMRG00000014243) MTPAP (ENSSMRG00000014244) JCAD (ENSSMRG00000014245) SVIL (ENSSMRG00000014248) ZEB1 (ENSSMRG00000014251) ##22 ARHGAP12 (ENSSMRG00000014260) ##27 KIF5B (ENSSMRG00000014266) EPC1 (ENSSMRG00000014272) ITGB1 (ENSSMRG00000014274) NRP1 (ENSSMRG00000014277) PARD3 (ENSSMRG00000014284) CUL2 (ENSSMRG00000014286) CREM (ENSSMRG00000014288) ENSSMRG00000014289 CCNY (ENSSMRG00000014290) GJD4 (ENSSMRG00000014291) FZD8 (ENSSMRG00000014294) ENSSMRG00000014296 ENSSMRG00000014298 KLF6 (ENSSMRG00000014302) Common wall lizard MODERN SPECIES 3 ENSPMRG00000012626 ENSPMRG00000012622 ENSPMRG00000012620 MKX (ENSPMRG00000012617) ENSPMRG00000012613 ODAD2 (ENSPMRG00000012580) MPP7 (ENSPMRG00000012555) SSNA1 (ENSPMRG00000012547) WAC (ENSPMRG00000012515) ENSPMRG00000012500 BAMBI (ENSPMRG00000012495) MAP3K8 (ENSPMRG00000012486) ENSPMRG00000012476 JCAD (ENSPMRG00000012468) SVIL (ENSPMRG00000012214) ENSPMRG00000012141 ##22 ARHGAP12 (ENSPMRG00000012126) ##27 KIF5B (ENSPMRG00000012114) EPC1 (ENSPMRG00000012105) ENSPMRG00000012095 ENSPMRG00000012054 NRP1 (ENSPMRG00000012037) ENSPMRG00000012031 ENSPMRG00000012028 ENSPMRG00000012024 PARD3 (ENSPMRG00000011980) CUL2 (ENSPMRG00000011957) CREM (ENSPMRG00000011951) CCNY (ENSPMRG00000011946) GJD4 (ENSPMRG00000011945) FZD8 (ENSPMRG00000011943) Mammalia ANCESTRAL SPECIES 4 ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00980000202875 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 Platypus MODERN SPECIES 4 ACBD5 (ENSOANG00000006034) MASTL (ENSOANG00000006036) YME1L1 (ENSOANG00000006037) RAB18 (ENSOANG00000036374) MKX (ENSOANG00000045734) ODAD2 (ENSOANG00000006039) MPP7 (ENSOANG00000006040) WAC (ENSOANG00000006041) BAMBI (ENSOANG00000006042) ENSOANG00000006043 MAP3K8 (ENSOANG00000006044) MTPAP (ENSOANG00000006046) ENSOANG00000042849 SVIL (ENSOANG00000006048) ENSOANG00000006050 ZEB1 (ENSOANG00000006051) ##22 ARHGAP12 (ENSOANG00000006052) ##27 KIF5B (ENSOANG00000006056) EPC1 (ENSOANG00000006058) ENSOANG00000031625 ITGB1 (ENSOANG00000006060) NRP1 (ENSOANG00000006063) PARD3 (ENSOANG00000006064) CUL2 (ENSOANG00000006068) CREM (ENSOANG00000006077) CCNY (ENSOANG00000047992) ENSOANG00000046614 FZD8 (ENSOANG00000043371) KLF6 (ENSOANG00000006083) PITRM1 (ENSOANG00000006085) PFKP (ENSOANG00000006086) Theria ANCESTRAL SPECIES ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00980000202875 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 Marsupialia ANCESTRAL SPECIES 4 ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000164060 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00980000202875 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 Marsupialia_b ANCESTRAL SPECIES 10 ENSGT00550000074836 ENSGT00940000164060 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00390000004735.C.f ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 ENSGT00940000155002.b ENSGT00940000157252 Diprotodontia ANCESTRAL SPECIES 41 ENSGT00550000074836 ENSGT00940000164060 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00390000004735.C.f ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000177290 ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 ENSGT00940000155002.b Diprotodontia_a ANCESTRAL SPECIES 9 ENSGT00550000074836 ENSGT00940000164060 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00390000004735.C.f ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000177290 ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 ENSGT00940000155002.b Common wonbat MODERN SPECIES 1086 MASTL (ENSVURG00010024399) YME1L1 (ENSVURG00010024385) ENSVURG00010024378 ENSVURG00010024374 MKX (ENSVURG00010024370) ODAD2 (ENSVURG00010024367) MPP7 (ENSVURG00010024366) WAC (ENSVURG00010024358) BAMBI (ENSVURG00010024352) MAP3K8 (ENSVURG00010024347) MTPAP (ENSVURG00010024344) ENSVURG00010024343 ENSVURG00010024338 SVIL (ENSVURG00010024042) ENSVURG00010023999 ZEB1 (ENSVURG00010023993) ##22 ARHGAP12 (ENSVURG00010023985) ##27 KIF5B (ENSVURG00010023979) EPC1 (ENSVURG00010023973) ITGB1 (ENSVURG00010023964) NRP1 (ENSVURG00010023955) ENSVURG00010023942 ENSVURG00010023939 ENSVURG00010023934 ENSVURG00010023932 CUL2 (ENSVURG00010023920) CREM (ENSVURG00010023893) ENSVURG00010023882 ENSVURG00010023881 CCNY (ENSVURG00010023876) ENSVURG00010023871 koala MODERN SPECIES 38 YME1L1 (ENSPCIG00000029415) ENSPCIG00000036324 ENSPCIG00000005468 RAB18 (ENSPCIG00000028705) MKX (ENSPCIG00000028704) ODAD2 (ENSPCIG00000028701) MPP7 (ENSPCIG00000028698) WAC (ENSPCIG00000028691) BAMBI (ENSPCIG00000028689) MAP3K8 (ENSPCIG00000018262) MTPAP (ENSPCIG00000018263) ENSPCIG00000036832 ENSPCIG00000017033 SVIL (ENSPCIG00000017018) ENSPCIG00000032227 ZEB1 (ENSPCIG00000011050) ##22 ARHGAP12 (ENSPCIG00000020000) ##27 KIF5B (ENSPCIG00000020005) EPC1 (ENSPCIG00000020008) ENSPCIG00000025558 ENSPCIG00000036745 ITGB1 (ENSPCIG00000015501) NRP1 (ENSPCIG00000015535) ENSPCIG00000031890 PARD3 (ENSPCIG00000016072) ENSPCIG00000016086 ENSPCIG00000016087 CUL2 (ENSPCIG00000016089) CREM (ENSPCIG00000007139) ENSPCIG00000035090 CCNY (ENSPCIG00000007147) Wallaby MODERN SPECIES 5537 ENSMEUG00000008117 ##22 Tasmanian devil MODERN SPECIES 4 ENSSHAG00000029044 ENSSHAG00000009522 ENSSHAG00000008836 ENSSHAG00000027130 MKX (ENSSHAG00000032197) ODAD2 (ENSSHAG00000013953) MPP7 (ENSSHAG00000012597) WAC (ENSSHAG00000010908) ENSSHAG00000029399 ENSSHAG00000001973 MTPAP (ENSSHAG00000001222) ENSSHAG00000014509 ENSSHAG00000026642 ENSSHAG00000011750 ENSSHAG00000010691 ZEB1 (ENSSHAG00000005352) ##22 ARHGAP12 (ENSSHAG00000007832) ##27 KIF5B (ENSSHAG00000006246) EPC1 (ENSSHAG00000001196) ENSSHAG00000023902 ITGB1 (ENSSHAG00000016377) NRP1 (ENSSHAG00000015113) PARD3 (ENSSHAG00000006698) CUL2 (ENSSHAG00000017471) CREM (ENSSHAG00000025076) CCNY (ENSSHAG00000016410) ENSSHAG00000031998 ENSSHAG00000026422 ENSSHAG00000024663 ENSSHAG00000015687 PITRM1 (ENSSHAG00000011485) Opossum MODERN SPECIES 7 YME1L1 (ENSMODG00000008389) ENSMODG00000008258 RAB18 (ENSMODG00000008253) MKX (ENSMODG00000008244) ENSMODG00000008232 MPP7 (ENSMODG00000008195) WAC (ENSMODG00000008157) ENSMODG00000029379 ENSMODG00000046890 BAMBI (ENSMODG00000008021) MAP3K8 (ENSMODG00000007954) MTPAP (ENSMODG00000007924) ENSMODG00000042238 SVIL (ENSMODG00000007872) ZNF438 (ENSMODG00000007859) ZEB1 (ENSMODG00000007847) ##22 ARHGAP12 (ENSMODG00000007821) ##27 KIF5B (ENSMODG00000007760) EPC1 (ENSMODG00000007604) ENSMODG00000044676 ENSMODG00000048889 ENSMODG00000027907 ENSMODG00000029376 ITGB1 (ENSMODG00000007536) ENSMODG00000046887 NRP1 (ENSMODG00000007439) PARD3 (ENSMODG00000007069) CUL2 (ENSMODG00000006944) CREM (ENSMODG00000006900) ENSMODG00000038906 CCNY (ENSMODG00000006764) Eutheria ANCESTRAL SPECIES 1 ENSGT00550000074836 ENSGT00940000162459 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 ENSGT00940000155002.b Boreoeutheria ANCESTRAL SPECIES 23 ENSGT00940000162459 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000003031 ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Euarchontoglires ANCESTRAL SPECIES 23 ENSGT00940000162459 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000003031 ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Primates ANCESTRAL SPECIES 27 ENSGT00940000162459.c.b ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000159227 ENSGT00390000003031 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT00910000148002 ENSGT01090000260098.B ENSGT00940000161191.A Haplorrhini ANCESTRAL SPECIES 32 ENSGT00940000162459.c.a ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000159227 ENSGT00390000003031 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT00910000148002 ENSGT01090000260098.B ENSGT00940000161191.A Simiiformes ANCESTRAL SPECIES 29 ENSGT00940000162459.c.a ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00550000074817.e.a.b ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000159227 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT00910000148002 ENSGT01090000260098.B ENSGT00940000161191.A Catarrhini ANCESTRAL SPECIES 26 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000003031 ENSGT00910000147147 ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000159227 ENSGT00940000154653.oe.a ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT00910000148002 ENSGT01090000260098.B ENSGT00940000161191.A Hominoidea ANCESTRAL SPECIES 11 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000003031 ENSGT00910000147147 ENSGT00940000159227 ENSGT00940000154653.oe.a ENSGT00390000015348 ENSGT00940000158582 ENSGT00910000147809 ENSGT00940000158806 ENSGT00940000154653.pe ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000160407.n ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT00910000148002 ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00950000182984.b.a.a.f Hominidae ANCESTRAL SPECIES 13 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227.o ENSGT00390000003031 ENSGT00910000147147 ENSGT00940000159227.p.b ENSGT00940000154653.oe.a ENSGT00390000015348 ENSGT00940000158582 ENSGT00910000147809 ENSGT00940000158806 ENSGT00940000159227.p.a ENSGT00940000154653.oe.b ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000160407.n ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT00910000148002 ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00950000182984.b.a.a.f Homo/Pan/Gorilla group ANCESTRAL SPECIES 28 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227.o ENSGT00390000003031 ENSGT00910000147147 ENSGT00940000159227.p.b ENSGT00940000154653.oe.a ENSGT00390000015348 ENSGT00940000158582 ENSGT00910000147809 ENSGT00940000158806 ENSGT00940000159227.p.a ENSGT00940000154653.oe.b ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000160407.n ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT00910000148002 ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00950000182984.b.a.a.f Homo/Pan group ANCESTRAL SPECIES 28 ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000003031 ENSGT00910000147147 ENSGT00940000159227.p.b ENSGT00940000154653.oe.a ENSGT00390000015348 ENSGT00940000158582 ENSGT00910000147809 ENSGT00940000158806 ENSGT00940000159227.p.a ENSGT00940000154653.oe.b ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000160407.n ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT00910000148002 ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00950000182984.b.a.a.f Pan ANCESTRAL SPECIES 11 ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000003031 ENSGT00910000147147 ENSGT00940000159227.p.b ENSGT00940000154653.oe.a ENSGT00390000015348 ENSGT00940000158582 ENSGT00910000147809 ENSGT00940000158806 ENSGT00940000159227.p.a ENSGT00940000154653.oe.b ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000160407.n ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT00910000148002 ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00910000147282 Chimpanzee MODERN SPECIES 1 ODAD2 (ENSPTRG00000002386) MPP7 (ENSPTRG00000002387) WAC (ENSPTRG00000002388) BAMBI (ENSPTRG00000002389) ENSPTRG00000029916 ENSPTRG00000043920 LYZL1 (ENSPTRG00000049519) SVIL (ENSPTRG00000002392) JCAD (ENSPTRG00000002395) MTPAP (ENSPTRG00000033794) ENSPTRG00000052711 MAP3K8 (ENSPTRG00000002400) LYZL2 (ENSPTRG00000046294) ENSPTRG00000043921 ZNF438 (ENSPTRG00000002403) ZEB1 (ENSPTRG00000002404) ##22 ARHGAP12 (ENSPTRG00000002406) ##27 KIF5B (ENSPTRG00000002408) EPC1 (ENSPTRG00000002410) CCDC7 (ENSPTRG00000034345) ENSPTRG00000005860 ITGB1 (ENSPTRG00000002413) NRP1 (ENSPTRG00000002414) PARD3 (ENSPTRG00000002415) ENSPTRG00000040987 CUL2 (ENSPTRG00000002418) CREM (ENSPTRG00000002420) CCNY (ENSPTRG00000002421) ENSPTRG00000046167 GJD4 (ENSPTRG00000002422) FZD8 (ENSPTRG00000029908) Bonobo MODERN SPECIES 1 MKX (ENSPPAG00000041924) ODAD2 (ENSPPAG00000017967) MPP7 (ENSPPAG00000032595) WAC (ENSPPAG00000040064) BAMBI (ENSPPAG00000004681) ENSPPAG00000025851 LYZL1 (ENSPPAG00000028778) SVIL (ENSPPAG00000041197) JCAD (ENSPPAG00000028488) MTPAP (ENSPPAG00000038626) ENSPPAG00000030802 MAP3K8 (ENSPPAG00000036603) ENSPPAG00000039381 ENSPPAG00000042576 ZNF438 (ENSPPAG00000037822) ZEB1 (ENSPPAG00000035575) ##22 ENSPPAG00000020524 ARHGAP12 (ENSPPAG00000028897) ##27 KIF5B (ENSPPAG00000028264) EPC1 (ENSPPAG00000032605) CCDC7 (ENSPPAG00000034944) ITGB1 (ENSPPAG00000038726) NRP1 (ENSPPAG00000000746) PARD3 (ENSPPAG00000038592) CUL2 (ENSPPAG00000036130) ENSPPAG00000036551 CCNY (ENSPPAG00000026390) ENSPPAG00000038535 GJD4 (ENSPPAG00000039556) ENSPPAG00000040359 ENSPPAG00000032518 Human MODERN SPECIES 1 ACBD5 (ENSG00000107897) PTCHD3 (ENSG00000182077) RAB18 (ENSG00000099246) MKX (ENSG00000150051) ODAD2 (ENSG00000169126) MPP7 (ENSG00000150054) WAC (ENSG00000095787) BAMBI (ENSG00000095739) LYZL1 (ENSG00000120563) SVIL (ENSG00000197321) JCAD (ENSG00000165757) MTPAP (ENSG00000107951) MAP3K8 (ENSG00000107968) LYZL2 (ENSG00000151033) ZNF438 (ENSG00000183621) ZEB1 (ENSG00000148516) ##22 ARHGAP12 (ENSG00000165322) ##27 KIF5B (ENSG00000170759) EPC1 (ENSG00000120616) CCDC7 (ENSG00000216937) ITGB1 (ENSG00000150093) NRP1 (ENSG00000099250) PARD3 (ENSG00000148498) CUL2 (ENSG00000108094) CREM (ENSG00000095794) CCNY (ENSG00000108100) GJD4 (ENSG00000177291) FZD8 (ENSG00000177283) ANKRD30A (ENSG00000148513) ZNF248 (ENSG00000198105) ZNF25 (ENSG00000175395) Gorilla MODERN SPECIES 1 MKX (ENSGGOG00000016220) ODAD2 (ENSGGOG00000014550) MPP7 (ENSGGOG00000013306) WAC (ENSGGOG00000005639) BAMBI (ENSGGOG00000004600) ENSGGOG00000000756 ENSGGOG00000026771 JCAD (ENSGGOG00000017151) ENSGGOG00000009335 ENSGGOG00000043632 ENSGGOG00000025617 MAP3K8 (ENSGGOG00000005573) ENSGGOG00000022362 ENSGGOG00000037717 ZNF438 (ENSGGOG00000002677) ZEB1 (ENSGGOG00000010090) ##22 ARHGAP12 (ENSGGOG00000012753) ##27 KIF5B (ENSGGOG00000013417) ENSGGOG00000040767 ENSGGOG00000043841 EPC1 (ENSGGOG00000008088) ENSGGOG00000022296 CCDC7 (ENSGGOG00000004506) ITGB1 (ENSGGOG00000006118) NRP1 (ENSGGOG00000001496) PARD3 (ENSGGOG00000005482) CUL2 (ENSGGOG00000003348) CREM (ENSGGOG00000003999) CCNY (ENSGGOG00000004406) GJD4 (ENSGGOG00000005857) ANKRD30A (ENSGGOG00000016263) Orangutan MODERN SPECIES 1 ENSPPYG00000002171 RAB18 (ENSPPYG00000002172) MKX (ENSPPYG00000002173) ODAD2 (ENSPPYG00000002174) MPP7 (ENSPPYG00000002175) WAC (ENSPPYG00000002177) BAMBI (ENSPPYG00000002178) ENSPPYG00000002180 SVIL (ENSPPYG00000002182) JCAD (ENSPPYG00000002183) MTPAP (ENSPPYG00000002184) MAP3K8 (ENSPPYG00000002811) ENSPPYG00000002186 ENSPPYG00000040362 ZNF438 (ENSPPYG00000002187) ZEB1 (ENSPPYG00000002189) ##22 ARHGAP12 (ENSPPYG00000002191) ##27 KIF5B (ENSPPYG00000002192) ENSPPYG00000014146 EPC1 (ENSPPYG00000002193) CCDC7 (ENSPPYG00000002194) ITGB1 (ENSPPYG00000002195) NRP1 (ENSPPYG00000002196) PARD3 (ENSPPYG00000002197) CUL2 (ENSPPYG00000019905) CREM (ENSPPYG00000002198) CCNY (ENSPPYG00000002199) GJD4 (ENSPPYG00000002200) FZD8 (ENSPPYG00000030817) ZNF248 (ENSPPYG00000002202) ZNF25 (ENSPPYG00000002203) Gibbon MODERN SPECIES 8 MKX (ENSNLEG00000016980) ODAD2 (ENSNLEG00000016984) MPP7 (ENSNLEG00000017002) WAC (ENSNLEG00000017014) BAMBI (ENSNLEG00000017028) ENSNLEG00000031639 ENSNLEG00000017070 SVIL (ENSNLEG00000017039) JCAD (ENSNLEG00000017054) MTPAP (ENSNLEG00000017059) ENSNLEG00000035799 MAP3K8 (ENSNLEG00000017064) ENSNLEG00000017036 ENSNLEG00000031625 ZNF438 (ENSNLEG00000018129) ZEB1 (ENSNLEG00000018130) ##22 ARHGAP12 (ENSNLEG00000018131) ##27 KIF5B (ENSNLEG00000018132) ENSNLEG00000029078 ENSNLEG00000035248 EPC1 (ENSNLEG00000018134) ENSNLEG00000018135 ITGB1 (ENSNLEG00000018136) NRP1 (ENSNLEG00000018137) PARD3 (ENSNLEG00000018138) ENSNLEG00000031224 ENSNLEG00000027443 ENSNLEG00000018140 CCNY (ENSNLEG00000034717) ENSNLEG00000029446 GJD4 (ENSNLEG00000018142) Cercopithecidae ANCESTRAL SPECIES 29 ENSGT00550000074807.d ENSGT00940000163080 ENSGT00390000012569.a.fb.b.b.b.b ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000003031 ENSGT00910000147147 ENSGT00940000154653.oe.a.c ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000159227 ENSGT00940000154653.oe.a.d ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Rhinopithecus ANCESTRAL SPECIES 441 ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000159227 ENSGT00940000154653.oe.a.d ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000155264.m.a Golden snub-nosed monkey MODERN SPECIES 3146 JCAD (ENSRROG00000029811) MTPAP (ENSRROG00000033147) MAP3K8 (ENSRROG00000044552) ENSRROG00000022644 ENSRROG00000045644 ZNF438 (ENSRROG00000028562) ZEB1 (ENSRROG00000042035) ##22 ARHGAP12 (ENSRROG00000040953) ##27 KIF5B (ENSRROG00000012198) EPC1 (ENSRROG00000040244) ENSRROG00000031766 ENSRROG00000038806 Black snub-nosed monkey MODERN SPECIES 1618 ZEB1 (ENSRBIG00000031956) ##22 ARHGAP12 (ENSRBIG00000001758) ##27 KIF5B (ENSRBIG00000039907) EPC1 (ENSRBIG00000031851) ENSRBIG00000031665 ENSRBIG00000036782 Cercopithecinae ANCESTRAL SPECIES 15 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000003031 ENSGT00910000147147 ENSGT00940000154653.oe.a.c ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000159227 ENSGT00940000154653.oe.a.d ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00510000047537.g.b ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000164163.f Vervet Monkey MODERN SPECIES 28 PTCHD3 (ENSCSAG00000011759) RAB18 (ENSCSAG00000011749) MKX (ENSCSAG00000011743) ODAD2 (ENSCSAG00000011739) MPP7 (ENSCSAG00000011728) ENSCSAG00000019060 WAC (ENSCSAG00000011716) BAMBI (ENSCSAG00000011702) ENSCSAG00000011695 ENSCSAG00000011685 JCAD (ENSCSAG00000011666) MTPAP (ENSCSAG00000011662) ENSCSAG00000011652 ENSCSAG00000011643 ZNF438 (ENSCSAG00000011639) ZEB1 (ENSCSAG00000011628) ##22 ARHGAP12 (ENSCSAG00000011619) ##27 KIF5B (ENSCSAG00000011606) ENSCSAG00000019061 EPC1 (ENSCSAG00000011587) ENSCSAG00000011562 ENSCSAG00000011490 ITGB1 (ENSCSAG00000011418) NRP1 (ENSCSAG00000011403) PARD3 (ENSCSAG00000011392) CUL2 (ENSCSAG00000011374) CREM (ENSCSAG00000011357) CCNY (ENSCSAG00000011350) GJD4 (ENSCSAG00000011343) ANKRD30BL (ENSCSAG00000011327) ENSCSAG00000011305 Cercopithecinae_a ANCESTRAL SPECIES 14 ENSGT00940000154101.b ENSGT00390000018318.u.b.a.a.o ENSGT00390000003031 ENSGT00910000147147 ENSGT00940000153314.a.b.a.k ENSGT00940000159227.l ENSGT01050000248507 ENSGT00940000154653.oe.a.c ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000159227.k ENSGT00940000154653.oe.a.d ENSGT00390000014526 ENSGT00950000183123.g.b.b.j ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00510000047537.g.b ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000155264.m.a ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Cercopithecinae_b ANCESTRAL SPECIES 56 ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000003031 ENSGT00910000147147 ENSGT00390000018433.s.a.a.w ENSGT00940000159227.l ENSGT01050000248507 ENSGT00940000154653.oe.a.c ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000159227.k ENSGT00940000154653.oe.a.d ENSGT00390000014526 ENSGT00950000183123.g.b.b.j ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00510000047537.g.b ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000155264.m.a ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Olive baboon MODERN SPECIES 2 ENSPANG00000047231 ENSPANG00000050196 BAMBI (ENSPANG00000042499) ENSPANG00000048136 ENSPANG00000009635 ENSPANG00000022984 ENSPANG00000040042 SVIL (ENSPANG00000022931) ENSPANG00000018403 ENSPANG00000038549 JCAD (ENSPANG00000022942) MTPAP (ENSPANG00000022927) MAP3K8 (ENSPANG00000022919) ENSPANG00000022921 ZNF438 (ENSPANG00000022917) ZEB1 (ENSPANG00000022899) ##22 ARHGAP12 (ENSPANG00000022901) ##27 KIF5B (ENSPANG00000022905) ENSPANG00000037456 ENSPANG00000044355 ENSPANG00000049487 EPC1 (ENSPANG00000022892) CCDC7 (ENSPANG00000022882) ITGB1 (ENSPANG00000022879) NRP1 (ENSPANG00000022837) PARD3 (ENSPANG00000022825) ENSPANG00000041517 ENSPANG00000039439 CREM (ENSPANG00000022744) CCNY (ENSPANG00000022745) GJD4 (ENSPANG00000022747) Cercopithecinae_d ANCESTRAL SPECIES 173 ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000003031 ENSGT00910000147147 ENSGT00390000018433.s.a.a.w ENSGT00940000159227.l ENSGT00940000154653.oe.a.c ENSGT00740000115534.a.b.f.a.b.n.a ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000159227.k ENSGT00940000154653.oe.a.d ENSGT00390000014526 ENSGT00950000183123.g.b.b.j ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00510000047537.g.b ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000155264.m.a Sooty mangabey MODERN SPECIES 253 ENSCATG00000031712 ENSCATG00000019296 ENSCATG00000035171 SVIL (ENSCATG00000021892) ENSCATG00000020748 JCAD (ENSCATG00000036286) MTPAP (ENSCATG00000035677) MAP3K8 (ENSCATG00000035664) ENSCATG00000028858 ENSCATG00000023564 ZNF438 (ENSCATG00000019097) ENSCATG00000001588 ZEB1 (ENSCATG00000017202) ##22 ARHGAP12 (ENSCATG00000016616) ##27 KIF5B (ENSCATG00000007099) ENSCATG00000009794 EPC1 (ENSCATG00000004828) ENSCATG00000014638 Drill MODERN SPECIES 650 ENSMLEG00000043689 ENSMLEG00000027146 JCAD (ENSMLEG00000043580) MTPAP (ENSMLEG00000043590) MAP3K8 (ENSMLEG00000042963) ENSMLEG00000031279 ENSMLEG00000020158 ZNF438 (ENSMLEG00000015784) ZEB1 (ENSMLEG00000041117) ##22 ARHGAP12 (ENSMLEG00000038972) ##27 KIF5B (ENSMLEG00000008109) ENSMLEG00000044082 EPC1 (ENSMLEG00000037215) ENSMLEG00000041557 ENSMLEG00000040836 Macaca ANCESTRAL SPECIES 11 ENSGT00940000154101.b ENSGT00390000018318.u.b.a.a.o ENSGT00390000003031 ENSGT00910000147147 ENSGT00940000153314.a.b.a.k ENSGT00940000159227.l ENSGT01050000248507 ENSGT00940000154653.oe.a.c.d ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000159227.k ENSGT00940000154653.oe.a.d ENSGT00390000014526 ENSGT00950000183123.g.b.b.j ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00510000047537.g.b ENSGT00940000155003.e.a ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000161962 ENSGT00940000162764.A Macaca_a ANCESTRAL SPECIES 13 ENSGT00940000156232.b ENSGT00390000001376.bb.b.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000018318.u.b.a.a.o ENSGT00940000153314.a.b.a.k ENSGT00940000159227.l ENSGT01050000248507 ENSGT00940000154653.oe.a.c.d ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000159227.k ENSGT00940000154653.oe.a.c.c ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000161627.a.b.b.b.b.b.a.a.a.a ENSGT00940000154801 ENSGT00510000047537.g.b ENSGT00940000155003.e.a ENSGT00940000164808 ENSGT00980000202055.A.a.b.a.b ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT01100000263493.a.b.b.a.b.b.a.a.a ENSGT01100000263539.b.a.a.a.a.a.a.b.b.b.b ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b Crab-eating macaque MODERN SPECIES 19 WAC (ENSMFAG00000001983) BAMBI (ENSMFAG00000037543) ENSMFAG00000053357 ENSMFAG00000059890 ENSMFAG00000037370 ENSMFAG00000029276 ENSMFAG00000000835 JCAD (ENSMFAG00000001494) MTPAP (ENSMFAG00000036179) MAP3K8 (ENSMFAG00000035171) ENSMFAG00000064330 ENSMFAG00000061262 ENSMFAG00000043891 ENSMFAG00000049898 ZNF438 (ENSMFAG00000042685) ZEB1 (ENSMFAG00000042570) ##22 ENSMFAG00000049958 ENSMFAG00000058934 ARHGAP12 (ENSMFAG00000003462) ##27 ENSMFAG00000047445 KIF5B (ENSMFAG00000003386) ENSMFAG00000030129 EPC1 (ENSMFAG00000038306) CCDC7 (ENSMFAG00000043277) ENSMFAG00000051854 ITGB1 (ENSMFAG00000034612) NRP1 (ENSMFAG00000032756) ENSMFAG00000056815 PARD3 (ENSMFAG00000002675) ENSMFAG00000049352 ENSMFAG00000062578 Rhesus MODERN SPECIES 19 ENSMMUG00000040316 WAC (ENSMMUG00000008268) ENSMMUG00000058434 BAMBI (ENSMMUG00000058108) ENSMMUG00000059681 ENSMMUG00000047021 ENSMMUG00000051311 SVIL (ENSMMUG00000001374) JCAD (ENSMMUG00000021559) MTPAP (ENSMMUG00000003001) ENSMMUG00000057989 MAP3K8 (ENSMMUG00000004930) ENSMMUG00000040958 ENSMMUG00000061175 ZNF438 (ENSMMUG00000007864) ZEB1 (ENSMMUG00000015453) ##22 ARHGAP12 (ENSMMUG00000004778) ##27 ENSMMUG00000049751 KIF5B (ENSMMUG00000015058) ENSMMUG00000058465 ENSMMUG00000012258 ENSMMUG00000062303 EPC1 (ENSMMUG00000012451) CCDC7 (ENSMMUG00000003925) ENSMMUG00000053745 ITGB1 (ENSMMUG00000017767) NRP1 (ENSMMUG00000017588) PARD3 (ENSMMUG00000019156) ENSMMUG00000061710 ENSMMUG00000057199 CUL2 (ENSMMUG00000002469) Pig-tailed macaque MODERN SPECIES 562 BAMBI (ENSMNEG00000035278) ENSMNEG00000025322 ENSMNEG00000040949 ENSMNEG00000000290 ENSMNEG00000045334 ENSMNEG00000040731 ENSMNEG00000040316 ENSMNEG00000031013 JCAD (ENSMNEG00000018085) MTPAP (ENSMNEG00000039635) MAP3K8 (ENSMNEG00000032888) ENSMNEG00000028826 ENSMNEG00000041348 ZNF438 (ENSMNEG00000033720) ENSMNEG00000038566 ZEB1 (ENSMNEG00000034471) ##22 ARHGAP12 (ENSMNEG00000004167) ##27 KIF5B (ENSMNEG00000040057) ENSMNEG00000009982 EPC1 (ENSMNEG00000021935) ENSMNEG00000035008 CCDC7 (ENSMNEG00000030140) ITGB1 (ENSMNEG00000019994) ENSMNEG00000032512 NRP1 (ENSMNEG00000038208) Platyrrhini ANCESTRAL SPECIES 39 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00550000074817.e.a.b.a ENSGT00390000003031 ENSGT00910000147147 ENSGT00940000154653 ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000159227 ENSGT00390000014526 ENSGT00730000111608.v.a ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Cebidae ANCESTRAL SPECIES 37 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00550000074817.e.a.b.a ENSGT00390000003031 ENSGT00910000147147 ENSGT00940000154653 ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000159227 ENSGT00390000014526 ENSGT00730000111608.v.a ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Marmoset MODERN SPECIES 19 RAB18 (ENSCJAG00000045749) MKX (ENSCJAG00000013033) ODAD2 (ENSCJAG00000013045) MPP7 (ENSCJAG00000013079) ENSCJAG00000082671 WAC (ENSCJAG00000013110) BAMBI (ENSCJAG00000013174) ENSCJAG00000079260 ENSCJAG00000039731 SVIL (ENSCJAG00000013199) JCAD (ENSCJAG00000013253) MTPAP (ENSCJAG00000013270) MAP3K8 (ENSCJAG00000013285) ENSCJAG00000044826 ZNF438 (ENSCJAG00000013316) ZEB1 (ENSCJAG00000013332) ##22 ARHGAP12 (ENSCJAG00000013435) ##27 KIF5B (ENSCJAG00000013540) ENSCJAG00000085682 ENSCJAG00000043725 ENSCJAG00000084622 EPC1 (ENSCJAG00000013637) ENSCJAG00000063983 CCDC7 (ENSCJAG00000013667) ENSCJAG00000079275 ITGB1 (ENSCJAG00000013701) NRP1 (ENSCJAG00000013753) PARD3 (ENSCJAG00000013814) CUL2 (ENSCJAG00000014005) CREM (ENSCJAG00000014066) CCNY (ENSCJAG00000014076) Cebidae_a ANCESTRAL SPECIES 45 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00550000074817.e.a.b.a ENSGT00390000003031 ENSGT00910000147147 ENSGT00940000154653 ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000159227 ENSGT00390000014526 ENSGT00730000111608.v.a ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Bolivian squirrel monkey MODERN SPECIES 142 MKX (ENSSBOG00000029146) ODAD2 (ENSSBOG00000002509) MPP7 (ENSSBOG00000032324) WAC (ENSSBOG00000034547) BAMBI (ENSSBOG00000022202) ENSSBOG00000021460 ENSSBOG00000034682 ENSSBOG00000032816 ENSSBOG00000025543 SVIL (ENSSBOG00000033129) JCAD (ENSSBOG00000025596) MTPAP (ENSSBOG00000034390) MAP3K8 (ENSSBOG00000026242) ZNF438 (ENSSBOG00000018731) ENSSBOG00000032905 ZEB1 (ENSSBOG00000032906) ##22 ARHGAP12 (ENSSBOG00000031838) ##27 KIF5B (ENSSBOG00000035877) EPC1 (ENSSBOG00000019273) ENSSBOG00000029915 CCDC7 (ENSSBOG00000020807) ITGB1 (ENSSBOG00000024301) NRP1 (ENSSBOG00000031821) PARD3 (ENSSBOG00000031729) ENSSBOG00000023761 CUL2 (ENSSBOG00000030747) CREM (ENSSBOG00000031632) CCNY (ENSSBOG00000031481) Capuchin MODERN SPECIES 92 MKX (ENSCCAG00000019211) ODAD2 (ENSCCAG00000030918) MPP7 (ENSCCAG00000029066) WAC (ENSCCAG00000032507) BAMBI (ENSCCAG00000029330) ENSCCAG00000022232 ENSCCAG00000021375 ENSCCAG00000033022 SVIL (ENSCCAG00000033619) ENSCCAG00000019503 JCAD (ENSCCAG00000018801) MTPAP (ENSCCAG00000031189) MAP3K8 (ENSCCAG00000037199) ENSCCAG00000032622 ZNF438 (ENSCCAG00000037350) ZEB1 (ENSCCAG00000030793) ##22 ARHGAP12 (ENSCCAG00000030673) ##27 KIF5B (ENSCCAG00000026642) EPC1 (ENSCCAG00000024678) ENSCCAG00000021719 ENSCCAG00000031742 CCDC7 (ENSCCAG00000014811) ITGB1 (ENSCCAG00000035611) NRP1 (ENSCCAG00000037690) PARD3 (ENSCCAG00000036314) CUL2 (ENSCCAG00000022671) ENSCCAG00000029939 CREM (ENSCCAG00000020678) CCNY (ENSCCAG00000015435) GJD4 (ENSCCAG00000028465) FZD8 (ENSCCAG00000018425) Mas night monkey MODERN SPECIES 978 ENSANAG00000030094 SVIL (ENSANAG00000019155) JCAD (ENSANAG00000035310) ENSANAG00000028210 MAP3K8 (ENSANAG00000020479) ENSANAG00000019589 ZNF438 (ENSANAG00000037375) ENSANAG00000034799 ZEB1 (ENSANAG00000035865) ##22 ARHGAP12 (ENSANAG00000032838) ##27 KIF5B (ENSANAG00000032557) EPC1 (ENSANAG00000026940) ENSANAG00000005489 ITGB1 (ENSANAG00000022785) NRP1 (ENSANAG00000034374) PARD3 (ENSANAG00000024799) CUL2 (ENSANAG00000023944) CREM (ENSANAG00000036868) ENSANAG00000020128 CCNY (ENSANAG00000034263) GJD4 (ENSANAG00000020917) Tarsier MODERN SPECIES 5609 ZEB1 (ENSTSYG00000009177) ##22 Strepsirrhini ANCESTRAL SPECIES 30 ENSGT00550000074836 ENSGT00940000162459.c.b ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT00910000148002 ENSGT01090000260098.B ENSGT00940000161191.A Lemuriformes ANCESTRAL SPECIES 42 ENSGT00550000074836 ENSGT00940000162459.c.b ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 Mouse lemur MODERN SPECIES 17 DNAJC1 (ENSMICG00000010537) MLLT10 (ENSMICG00000009574) SKIDA1 (ENSMICG00000009570) NEBL (ENSMICG00000001138) ENSMICG00000046344 PLXDC2 (ENSMICG00000001136) MALRD1 (ENSMICG00000033039) ZCCHC13 (ENSMICG00000002990) ENSMICG00000041494 MAP3K8 (ENSMICG00000003305) MTPAP (ENSMICG00000026621) JCAD (ENSMICG00000006774) SVIL (ENSMICG00000005393) ZNF438 (ENSMICG00000046502) ENSMICG00000033773 ZEB1 (ENSMICG00000006165) ##22 ARL5B (ENSMICG00000006011) NSUN6 (ENSMICG00000029435) CACNB2 (ENSMICG00000005995) SLC39A12 (ENSMICG00000005988) MRC1 (ENSMICG00000005965) TMEM236 (ENSMICG00000047850) STAM (ENSMICG00000005948) HACD1 (ENSMICG00000002157) ST8SIA6 (ENSMICG00000046983) VIM (ENSMICG00000011578) TRDMT1 (ENSMICG00000011567) CUBN (ENSMICG00000011487) RSU1 (ENSMICG00000011480) C1QL3 (ENSMICG00000011478) PTER (ENSMICG00000011472) Lemuriformes_a ANCESTRAL SPECIES 163 ENSGT00550000074836 ENSGT00940000162459.c.b ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 Coquerels sifaka MODERN SPECIES 602 ENSPCOG00000004226 ENSPCOG00000013574 RAB18 (ENSPCOG00000018906) MKX (ENSPCOG00000019199) ODAD2 (ENSPCOG00000025424) MPP7 (ENSPCOG00000009359) WAC (ENSPCOG00000013769) BAMBI (ENSPCOG00000028434) ENSPCOG00000000742 ENSPCOG00000020378 ENSPCOG00000028503 MTPAP (ENSPCOG00000025431) JCAD (ENSPCOG00000005935) SVIL (ENSPCOG00000000886) ENSPCOG00000011462 ZEB1 (ENSPCOG00000021709) ##22 ARHGAP12 (ENSPCOG00000024894) ##27 KIF5B (ENSPCOG00000013887) EPC1 (ENSPCOG00000026087) ENSPCOG00000018241 ENSPCOG00000027382 RNPC3 (ENSPCOG00000012968) COL11A1 (ENSPCOG00000023003) OLFM3 (ENSPCOG00000020745) S1PR1 (ENSPCOG00000026458) DPH5 (ENSPCOG00000009027) SLC30A7 (ENSPCOG00000024348) EXTL2 (ENSPCOG00000012529) VCAM1 (ENSPCOG00000020448) GPR88 (ENSPCOG00000003298) CDC14A (ENSPCOG00000008537) Greater bamboo lemur MODERN SPECIES 1246 ZEB1 (ENSPSMG00000012418) ##22 Bushbaby MODERN SPECIES 134 ENSOGAG00000008321 PTCHD3 (ENSOGAG00000012729) RAB18 (ENSOGAG00000028015) MKX (ENSOGAG00000026996) ODAD2 (ENSOGAG00000012743) MPP7 (ENSOGAG00000012749) ENSOGAG00000026788 WAC (ENSOGAG00000030010) BAMBI (ENSOGAG00000002860) ENSOGAG00000030774 MAP3K8 (ENSOGAG00000005419) MTPAP (ENSOGAG00000005417) JCAD (ENSOGAG00000024773) ENSOGAG00000002498 ENSOGAG00000024077 ZEB1 (ENSOGAG00000008365) ##22 ENSOGAG00000008370 ARHGAP12 (ENSOGAG00000016525) ##27 KIF5B (ENSOGAG00000016532) EPC1 (ENSOGAG00000026425) ENSOGAG00000031329 ITGB1 (ENSOGAG00000007551) NRP1 (ENSOGAG00000010288) PARD3 (ENSOGAG00000004069) ENSOGAG00000033967 CUL2 (ENSOGAG00000005046) CREM (ENSOGAG00000013986) CCNY (ENSOGAG00000003932) GJD4 (ENSOGAG00000034715) FZD8 (ENSOGAG00000028034) ENSOGAG00000028519 Euarchontoglires_A ANCESTRAL SPECIES 31 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Tree shrew MODERN SPECIES 5692 ENSTBEG00000008736 ##22 Glires ANCESTRAL SPECIES 31 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Lagomorpha ANCESTRAL SPECIES 131 ENSGT00940000156232.b ENSGT00940000156227.f ENSGT00940000157325 ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00550000074836 ENSGT00940000157002 ENSGT00940000156350 ENSGT00940000154811.A ENSGT00940000153498.B.a ENSGT00390000005508.b ENSGT00940000156105 ENSGT00940000157951 ENSGT00940000155939 ENSGT00940000155918 ENSGT00940000161144 ENSGT00940000153866.A Pika MODERN SPECIES 2093 ZEB1 (ENSOPRG00000007291) ##22 Rabbit MODERN SPECIES 7 ENSOCUG00000014318 ENSOCUG00000023468 ENSOCUG00000008228 ENSOCUG00000022121 ENSOCUG00000024479 MPP7 (ENSOCUG00000014344) MKX (ENSOCUG00000010649) ENSOCUG00000022307 ABCB10 (ENSOCUG00000007242) WAC (ENSOCUG00000004713) ENSOCUG00000017738 MAP3K8 (ENSOCUG00000006056) MTPAP (ENSOCUG00000007276) JCAD (ENSOCUG00000014102) SVIL (ENSOCUG00000010895) ZEB1 (ENSOCUG00000006516) ##22 ARHGAP12 (ENSOCUG00000015950) ##27 KIF5B (ENSOCUG00000017493) EPC1 (ENSOCUG00000000789) ENSOCUG00000036333 ENSOCUG00000022239 ANKRD26 (ENSOCUG00000008269) YME1L1 (ENSOCUG00000011293) MASTL (ENSOCUG00000011308) ACBD5 (ENSOCUG00000016879) ABI1 (ENSOCUG00000010076) PDSS1 (ENSOCUG00000010068) ENSOCUG00000034373 ENSOCUG00000037897 ENSOCUG00000005845 GAD2 (ENSOCUG00000017480) Rodentia ANCESTRAL SPECIES 26 ENSGT00940000158727 ENSGT00940000157325.w.b ENSGT00940000157325.x ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Rodentia_A ANCESTRAL SPECIES 35 ENSGT00940000158727 ENSGT00940000157325.w.b ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926.x ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Sciuridae ANCESTRAL SPECIES ENSGT00390000013550 ENSGT00390000015518 ENSGT00940000158727 ENSGT00940000157325.w.b ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926.x ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00950000182767.b.b.d.s ENSGT00940000161184 ENSGT00390000007526 Marmotini ANCESTRAL SPECIES 21 ENSGT00390000013550 ENSGT00390000015518 ENSGT00940000158727 ENSGT00940000157325.w.b ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926.x ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00950000182767.b.b.d.s ENSGT00940000161184 ENSGT00390000007526 Marmotini_b ANCESTRAL SPECIES 15 ENSGT00390000013550 ENSGT00390000015518 ENSGT00940000158727 ENSGT00940000157325.w.b ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926.x ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00950000182767.b.b.d.s ENSGT00940000161184 ENSGT00390000007526 Arctic ground squirrel MODERN SPECIES 264 BAMBI (ENSUPAG00010002838) ENSUPAG00010002845 ENSUPAG00010002856 MAP3K8 (ENSUPAG00010002877) MTPAP (ENSUPAG00010002895) JCAD (ENSUPAG00010002904) SVIL (ENSUPAG00010002910) ZNF438 (ENSUPAG00010003319) ZEB1 (ENSUPAG00010003340) ##22 ARHGAP12 (ENSUPAG00010003359) ##27 Squirrel MODERN SPECIES 174 ZEB1 (ENSSTOG00000016404) ##22 ENSSTOG00000032875 ARHGAP12 (ENSSTOG00000003596) ##27 KIF5B (ENSSTOG00000029259) EPC1 (ENSSTOG00000011902) ENSSTOG00000032005 ENSSTOG00000019715 ENSSTOG00000022870 ITGB1 (ENSSTOG00000013459) NRP1 (ENSSTOG00000013476) PARD3 (ENSSTOG00000015301) CUL2 (ENSSTOG00000014730) ENSSTOG00000033476 ENSSTOG00000005403 CCNY (ENSSTOG00000010974) GJD4 (ENSSTOG00000010981) Alpin marmot MODERN SPECIES 12 ENSMMMG00000023523 PTCHD3 (ENSMMMG00000023519) RAB18 (ENSMMMG00000023516) MKX (ENSMMMG00000023514) ODAD2 (ENSMMMG00000023506) MPP7 (ENSMMMG00000023492) ENSMMMG00000023487 ENSMMMG00000023421 BAMBI (ENSMMMG00000023420) ENSMMMG00000023412 MAP3K8 (ENSMMMG00000023406) MTPAP (ENSMMMG00000023380) JCAD (ENSMMMG00000023373) SVIL (ENSMMMG00000018193) ZNF438 (ENSMMMG00000018126) ZEB1 (ENSMMMG00000018103) ##22 ENSMMMG00000018069 ENSMMMG00000017828 ##27 KIF5B (ENSMMMG00000017793) ENSMMMG00000017789 EPC1 (ENSMMMG00000017762) ENSMMMG00000017719 ENSMMMG00000017700 ITGB1 (ENSMMMG00000017667) NRP1 (ENSMMMG00000017644) PARD3 (ENSMMMG00000016563) CUL2 (ENSMMMG00000016521) ENSMMMG00000016517 ENSMMMG00000016516 CREM (ENSMMMG00000015477) CCNY (ENSMMMG00000015447) Eurasian red squirrel MODERN SPECIES 3 PTCHD3 (ENSSVLG00005016944) RAB18 (ENSSVLG00005016797) MKX (ENSSVLG00005016740) ODAD2 (ENSSVLG00005016451) ENSSVLG00005016298 WAC (ENSSVLG00005015976) ENSSVLG00005015928 ENSSVLG00005015917 BAMBI (ENSSVLG00005015877) ENSSVLG00005015824 MAP3K8 (ENSSVLG00005015778) MTPAP (ENSSVLG00005015727) JCAD (ENSSVLG00005015699) SVIL (ENSSVLG00005014605) ZNF438 (ENSSVLG00005014347) ZEB1 (ENSSVLG00005014010) ##22 ENSSVLG00005013711 ARHGAP12 (ENSSVLG00005024026) ##27 ENSSVLG00005023935 ENSSVLG00005023922 ENSSVLG00005023874 KIF5B (ENSSVLG00005023823) EPC1 (ENSSVLG00005023747) ENSSVLG00005023715 ENSSVLG00005023536 ITGB1 (ENSSVLG00005023311) NRP1 (ENSSVLG00005023267) ENSSVLG00005023228 ENSSVLG00005023205 PARD3 (ENSSVLG00005022949) CUL2 (ENSSVLG00005022796) Hystricomorpha ANCESTRAL SPECIES 2 ENSGT00940000156380 ENSGT00940000163231 ENSGT00390000007160.a.b ENSGT00390000011228.b.b ENSGT01020000230354.A.b ENSGT00390000015073 ENSGT00940000162606 ENSGT00390000000950.c.b ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801.d ENSGT00940000155003.e.a ENSGT00950000183125.a ENSGT00390000003721.d.b ENSGT00940000154045.a ENSGT00390000003057 ENSGT00940000156776 ENSGT00390000014429.b ENSGT00530000063808.b ENSGT00390000007134 ENSGT00390000011492 ENSGT00390000001775.B ENSGT00940000157325.w.b.b ENSGT00940000156227.f Hystricomorpha_a ANCESTRAL SPECIES 11 ENSGT00940000156380 ENSGT00940000163231 ENSGT00390000007160.a.b ENSGT00390000011228.b.b ENSGT01020000230354.A.b ENSGT00390000015073 ENSGT00940000162606 ENSGT00390000000950.c.b ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801.d ENSGT00940000155003.e.a ENSGT00950000183125.a ENSGT00390000003721.d.b ENSGT00940000154045.a ENSGT00390000003057 ENSGT00940000156776 ENSGT00390000014429.b ENSGT00530000063808.b ENSGT00390000007134 ENSGT00390000011492 ENSGT00390000001775.B ENSGT00940000157325.w.b.b ENSGT00940000156227.f Hystricomorpha_b ANCESTRAL SPECIES 105 ENSGT00940000156380 ENSGT00940000163231 ENSGT00390000007160.a.b ENSGT00390000011228.b.b ENSGT01020000230354.A.b ENSGT00390000015073 ENSGT00940000162606 ENSGT00390000000950.c.b ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801.d ENSGT00940000155003.e.a Degu MODERN SPECIES 182 ENSODEG00000003377 ENSODEG00000018940 FRMD4A (ENSODEG00000003692) PRPF18 (ENSODEG00000003770) ENSODEG00000003796 ENSODEG00000003912 ENSODEG00000004040 ENSODEG00000003656 BAMBI (ENSODEG00000003677) ENSODEG00000003690 ENSODEG00000003722 ENSODEG00000003767 JCAD (ENSODEG00000003790) SVIL (ENSODEG00000004290) ZNF438 (ENSODEG00000002404) ZEB1 (ENSODEG00000002458) ##22 ENSODEG00000002565 ARHGAP12 (ENSODEG00000002709) ##27 KIF5B (ENSODEG00000003045) ENSODEG00000003108 ENSODEG00000002223 ENSODEG00000002234 RACK1 (ENSODEG00000002250) ENSODEG00000002257 ENSODEG00000002272 ENSODEG00000002285 ENSODEG00000018805 TRIM7 (ENSODEG00000002621) ENSODEG00000018905 ENSODEG00000018859 ENSODEG00000002655 Long-tailed chinchilla MODERN SPECIES 136 MSANTD7 (ENSCLAG00000013742) CDNF (ENSCLAG00000015411) ENSCLAG00000007387 ENSCLAG00000009034 PRPF18 (ENSCLAG00000011770) ENSCLAG00000011064 SEPHS1 (ENSCLAG00000016058) ENSCLAG00000014394 BAMBI (ENSCLAG00000013583) ENSCLAG00000015726 MAP3K8 (ENSCLAG00000015841) MTPAP (ENSCLAG00000006536) JCAD (ENSCLAG00000007806) SVIL (ENSCLAG00000017014) ZNF438 (ENSCLAG00000009405) ZEB1 (ENSCLAG00000007760) ##22 ARHGAP12 (ENSCLAG00000013397) ##27 KIF5B (ENSCLAG00000009833) ENSCLAG00000007834 EPC1 (ENSCLAG00000008070) Guinea pig MODERN SPECIES 39 HSPA14 (ENSCPOG00000008489) CDNF (ENSCPOG00000038576) ENSCPOG00000032147 FRMD4A (ENSCPOG00000001529) PRPF18 (ENSCPOG00000021069) ENSCPOG00000002714 SEPHS1 (ENSCPOG00000005549) BAMBI (ENSCPOG00000034429) ENSCPOG00000000268 ENSCPOG00000010457 MAP3K8 (ENSCPOG00000006641) MTPAP (ENSCPOG00000004018) JCAD (ENSCPOG00000005872) SVIL (ENSCPOG00000013047) ZNF438 (ENSCPOG00000000531) ZEB1 (ENSCPOG00000007682) ##22 ARHGAP12 (ENSCPOG00000005846) ##27 KIF5B (ENSCPOG00000008278) EPC1 (ENSCPOG00000002494) DHTKD1 (ENSCPOG00000008248) SEC61A2 (ENSCPOG00000000126) NUDT5 (ENSCPOG00000000127) CDC123 (ENSCPOG00000000128) CAMK1D (ENSCPOG00000003027) OPTN (ENSCPOG00000007560) MCM10 (ENSCPOG00000007571) UCMA (ENSCPOG00000007580) ENSCPOG00000019290 PHYH (ENSCPOG00000007582) RAB18 (ENSCPOG00000032827) MKX (ENSCPOG00000035405) Naked mole-rat female MODERN SPECIES 20 ENSHGLG00000018534 ENSHGLG00000019026 ENSHGLG00000018865 ENSHGLG00000042786 ENSHGLG00000016558 ENSHGLG00000021001 ENSHGLG00000016371 MAP3K8 (ENSHGLG00000016414) MTPAP (ENSHGLG00000016439) JCAD (ENSHGLG00000045602) ENSHGLG00000016579 ENSHGLG00000016625 ENSHGLG00000041669 ENSHGLG00000016639 ENSHGLG00000042389 ZEB1 (ENSHGLG00000018844) ##22 ARHGAP12 (ENSHGLG00000018869) ##27 KIF5B (ENSHGLG00000018736) ENSHGLG00000014597 EPC1 (ENSHGLG00000018745) ENSHGLG00000000283 ENSHGLG00000018366 DHTKD1 (ENSHGLG00000017527) ENSHGLG00000036155 SEC61A2 (ENSHGLG00000017313) NUDT5 (ENSHGLG00000003588) CDC123 (ENSHGLG00000003710) CAMK1D (ENSHGLG00000003840) CCDC3 (ENSHGLG00000041672) OPTN (ENSHGLG00000004041) MCM10 (ENSHGLG00000004234) Rodentia_B ANCESTRAL SPECIES 32 ENSGT00440000037780.a ENSGT00940000156232.b ENSGT00940000156625 ENSGT00940000156227.f ENSGT00940000157325.x ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00550000074836 ENSGT00940000157002 ENSGT00940000156350 ENSGT00940000154811.A ENSGT00940000153498.B.a ENSGT00940000156105 ENSGT00940000157951 ENSGT00940000155939 ENSGT00940000155918 ENSGT00940000161144 ENSGT00940000153866.A ENSGT00940000162225 Kangaroo rat MODERN SPECIES 343 Rhou (ENSDORG00000024172) Wac (ENSDORG00000028968) ENSDORG00000023262 Mpp7 (ENSDORG00000013909) Odad2 (ENSDORG00000013131) Mkx (ENSDORG00000010634) ENSDORG00000028596 Bambi (ENSDORG00000011372) Lyzl1 (ENSDORG00000016374) Map3k8 (ENSDORG00000027938) Mtpap (ENSDORG00000008425) Jcad (ENSDORG00000010476) ENSDORG00000024825 Svil (ENSDORG00000012493) Zfp438 (ENSDORG00000000914) Zeb1 (ENSDORG00000007230) ##22 Arhgap12 (ENSDORG00000000084) ##27 Kif5b (ENSDORG00000009869) ENSDORG00000030026 ENSDORG00000025588 Yme1l1 (ENSDORG00000007653) Mastl (ENSDORG00000023472) ENSDORG00000006106 Acbd5 (ENSDORG00000011034) Abi1 (ENSDORG00000004644) Pdss1 (ENSDORG00000004641) Apbb1ip (ENSDORG00000009613) Gad2 (ENSDORG00000004189) ENSDORG00000028584 ENSDORG00000028759 Gpr158 (ENSDORG00000000417) Myomorpha ANCESTRAL SPECIES 67 ENSGT00940000156952 ENSGT00940000154926 ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000157325.x ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a Lesser Egyptian jerboa MODERN SPECIES 72 Arid4b (ENSJJAG00000021368) ENSJJAG00000010664 Tbce (ENSJJAG00000016634) B3galnt2 (ENSJJAG00000023217) Gng4 (ENSJJAG00000021565) Lyst (ENSJJAG00000003513) Bambi (ENSJJAG00000023950) Lyzl1 (ENSJJAG00000005043) Map3k8 (ENSJJAG00000010969) Mtpap (ENSJJAG00000023931) Jcad (ENSJJAG00000008684) Svil (ENSJJAG00000019438) ENSJJAG00000015366 Zfp438 (ENSJJAG00000024201) ENSJJAG00000007372 Zeb1 (ENSJJAG00000009716) ##22 ENSJJAG00000016042 Arhgap12 (ENSJJAG00000022673) ##27 ENSJJAG00000024357 Fzd8 (ENSJJAG00000013971) Gjd4 (ENSJJAG00000016842) Ccny (ENSJJAG00000017981) Nckap5 (ENSJJAG00000015804) ENSJJAG00000015262 Gpr39 (ENSJJAG00000004959) Slc35f5 (ENSJJAG00000021727) Actr3 (ENSJJAG00000007565) Dpp10 (ENSJJAG00000022273) ENSJJAG00000017042 ENSJJAG00000018802 Ccdc93 (ENSJJAG00000014671) Muroidea ANCESTRAL SPECIES 82 ENSGT00940000156952 ENSGT00940000154926 ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000157325.x ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000161191.A ENSGT01090000260098.B ENSGT00940000154453.a.b.b Upper Galilee mountains blind mole rat MODERN SPECIES 1535 Lingo2 (ENSNGAG00000014224) Bambi (ENSNGAG00000000106) Lyzl1 (ENSNGAG00000000242) ENSNGAG00000011497 ENSNGAG00000012283 ENSNGAG00000016425 Mtpap (ENSNGAG00000017051) Jcad (ENSNGAG00000013727) ENSNGAG00000013578 Svil (ENSNGAG00000016934) Zfp438 (ENSNGAG00000014085) Zeb1 (ENSNGAG00000016254) ##22 Arhgap12 (ENSNGAG00000017168) ##27 Kif5b (ENSNGAG00000018707) ENSNGAG00000019893 ENSNGAG00000020206 ENSNGAG00000021089 Rab18 (ENSNGAG00000001465) Mkx (ENSNGAG00000007189) Odad2 (ENSNGAG00000011052) Mpp7 (ENSNGAG00000000327) Wac (ENSNGAG00000018902) Fzd8 (ENSNGAG00000014935) Gjd4 (ENSNGAG00000014543) Ccny (ENSNGAG00000006978) ENSNGAG00000015345 Muroidea_A ANCESTRAL SPECIES 34 ENSGT00940000156952 ENSGT00940000154926 ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00520000059545 ENSGT00940000157325.x ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000161191.A ENSGT01090000260098.B ENSGT00940000154453.a.b.b Cricetidae ANCESTRAL SPECIES 7 ENSGT00940000153498.B.a ENSGT00940000154811.A ENSGT00940000156350 ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000153661.a.b.a.b.a.b.a.b ENSGT00940000156952 ENSGT00940000154926 ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00520000059545 ENSGT00940000157325.x ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000161191.A ENSGT01090000260098.B ENSGT00940000154453.a.b.b ENSGT00390000009751 ENSGT00860000135880 ENSGT01090000259987.a.b Cricetidae_B ANCESTRAL SPECIES 5 ENSGT00940000153498.B.a ENSGT00940000154811.A ENSGT00940000156350 ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000161777.a.a.a ENSGT00940000156952 ENSGT00940000154926 ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00520000059545 ENSGT00940000157325.x ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000161191.A ENSGT01090000260098.B ENSGT00940000154453.a.b.b ENSGT00390000009751 ENSGT00860000135880 ENSGT01090000259987.a.b Prairie vole MODERN SPECIES 3 Acbd5 (ENSMOCG00000017637) Mastl (ENSMOCG00000008062) Yme1l1 (ENSMOCG00000020958) ENSMOCG00000013156 ENSMOCG00000018873 Crem (ENSMOCG00000002538) Cul2 (ENSMOCG00000019052) Bambi (ENSMOCG00000009000) Lyzl1 (ENSMOCG00000000563) ENSMOCG00000002897 Map3k8 (ENSMOCG00000000850) Mtpap (ENSMOCG00000002437) Jcad (ENSMOCG00000015379) Svil (ENSMOCG00000012898) Zfp438 (ENSMOCG00000014707) Zeb1 (ENSMOCG00000013432) ##22 Arhgap12 (ENSMOCG00000009460) ##27 ENSMOCG00000018138 Kif5b (ENSMOCG00000019118) ENSMOCG00000005535 Epc1 (ENSMOCG00000000443) ENSMOCG00000012449 ENSMOCG00000022076 Rab18 (ENSMOCG00000013044) Mkx (ENSMOCG00000015948) Odad2 (ENSMOCG00000011155) ENSMOCG00000019180 Mpp7 (ENSMOCG00000009850) ENSMOCG00000013927 Meig1 (ENSMOCG00000009538) Dclre1c (ENSMOCG00000006406) Northern American deer mouse MODERN SPECIES 18 Pdss1 (ENSPEMG00000014017) Abi1 (ENSPEMG00000022633) Acbd5 (ENSPEMG00000022231) Mastl (ENSPEMG00000022732) Yme1l1 (ENSPEMG00000022499) ENSPEMG00000026720 Crem (ENSPEMG00000010762) Cul2 (ENSPEMG00000019784) Bambi (ENSPEMG00000031220) Lyzl1 (ENSPEMG00000019546) Map3k8 (ENSPEMG00000020056) Mtpap (ENSPEMG00000019906) Jcad (ENSPEMG00000019810) Svil (ENSPEMG00000019892) Zfp438 (ENSPEMG00000019458) Zeb1 (ENSPEMG00000019404) ##22 Arhgap12 (ENSPEMG00000019343) ##27 Kif5b (ENSPEMG00000019291) ENSPEMG00000012903 Epc1 (ENSPEMG00000019284) 4921524L21Rik (ENSPEMG00000019630) Rab18 (ENSPEMG00000026190) Mkx (ENSPEMG00000026515) Odad2 (ENSPEMG00000019997) Mpp7 (ENSPEMG00000019604) ENSPEMG00000025891 ENSPEMG00000025783 ENSPEMG00000025246 ENSPEMG00000028982 Fzd8 (ENSPEMG00000019393) Gjd4 (ENSPEMG00000019387) Cricetinae ANCESTRAL SPECIES 26 ENSGT00940000153498.B.a ENSGT00940000154811.A ENSGT00940000156350 ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000153661.a.b.a.b.a.b.a.b ENSGT00940000156952 ENSGT00940000154926 ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00520000059545 ENSGT00940000157325.x ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000161191.A ENSGT01090000260098.B ENSGT00940000154453.a.b.b ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 Chinese hamster chok1gshd MODERN SPECIES 317 Abi1 (ENSCGRG00001015687) Acbd5 (ENSCGRG00001015527) Mastl (ENSCGRG00001012625) Yme1l1 (ENSCGRG00001024397) Potegl (ENSCGRG00001019810) Crem (ENSCGRG00001013907) Cul2 (ENSCGRG00001010730) Bambi (ENSCGRG00001004379) Lyzl1 (ENSCGRG00001024217) Map3k8 (ENSCGRG00001019251) ENSCGRG00001017262 Jcad (ENSCGRG00001007782) ENSCGRG00001005314 Svil (ENSCGRG00001010819) Zfp438 (ENSCGRG00001006731) Zeb1 (ENSCGRG00001016946) ##22 Arhgap12 (ENSCGRG00001023720) ##27 Kif5b (ENSCGRG00001021999) Epc1 (ENSCGRG00001013506) ENSCGRG00001000414 4921524L21Rik (ENSCGRG00001019523) Rab18 (ENSCGRG00001017519) Mkx (ENSCGRG00001009558) Odad2 (ENSCGRG00001018139) Mpp7 (ENSCGRG00001011478) Wac (ENSCGRG00001011994) ENSCGRG00001010846 Fzd8 (ENSCGRG00001009802) Gjd4 (ENSCGRG00001013718) Ccny (ENSCGRG00001001016) Golden Hamster MODERN SPECIES 801 Crem (ENSMAUG00000008158) Cul2 (ENSMAUG00000002278) Bambi (ENSMAUG00000008926) Lyzl1 (ENSMAUG00000005276) Map3k8 (ENSMAUG00000003774) Mtpap (ENSMAUG00000006874) Jcad (ENSMAUG00000006351) ENSMAUG00000001030 ENSMAUG00000000321 Zfp438 (ENSMAUG00000000065) Zeb1 (ENSMAUG00000000582) ##22 Arhgap12 (ENSMAUG00000017573) ##27 ENSMAUG00000015261 ENSMAUG00000014733 Kif5b (ENSMAUG00000012760) ENSMAUG00000015864 ENSMAUG00000016417 Epc1 (ENSMAUG00000015511) Murinae ANCESTRAL SPECIES 43 ENSGT00940000156952 ENSGT00940000154926 ENSGT00940000153181.z.g.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00520000059545 ENSGT00940000157325.x ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000161191.A ENSGT01090000260098.B ENSGT00940000154453.a.b.b Mus ANCESTRAL SPECIES 19 ENSGT00940000156952 ENSGT00940000154926 ENSGT00940000153181.z.g.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00520000059545 ENSGT00940000157325.x ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000161191.A ENSGT01090000260098.B ENSGT00940000154453.a.b.b ENSGT00940000157209.jb ENSGT00950000183074.A ENSGT00390000016232 Mus_A ANCESTRAL SPECIES 19 ENSGT00940000156952 ENSGT00940000154926 ENSGT00940000153181.z.g.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00520000059545 ENSGT00940000157325.x ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000161191.A ENSGT01090000260098.B ENSGT00940000154453.a.b.b ENSGT00940000157209.jb ENSGT00950000183074.A ENSGT00390000016232 Mus_B ANCESTRAL SPECIES 19 ENSGT00940000156952 ENSGT00940000154926 ENSGT00940000153181.z.g.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00520000059545 ENSGT00940000157325.x ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000161191.A ENSGT01090000260098.B ENSGT00940000154453.a.b.b ENSGT00940000157209.jb ENSGT00950000183074.A ENSGT00390000016232 Mouse MODERN SPECIES 9 Vmn1r238 (ENSMUSG00000091539) Crem (ENSMUSG00000063889) Cul2 (ENSMUSG00000024231) Bambi (ENSMUSG00000024232) Lyzl1 (ENSMUSG00000024233) Map3k8 (ENSMUSG00000024235) Mtpap (ENSMUSG00000024234) Jcad (ENSMUSG00000033960) Svil (ENSMUSG00000024236) Zfp438 (ENSMUSG00000050945) Zeb1 (ENSMUSG00000024238) ##22 Arhgap12 (ENSMUSG00000041225) ##27 Kif5b (ENSMUSG00000006740) Epc1 (ENSMUSG00000024240) 4921524L21Rik (ENSMUSG00000039540) Rab18 (ENSMUSG00000073639) Mkx (ENSMUSG00000061013) Odad2 (ENSMUSG00000061802) Mpp7 (ENSMUSG00000057440) Wac (ENSMUSG00000024283) Fzd8 (ENSMUSG00000036904) Gjd4 (ENSMUSG00000036855) Ccny (ENSMUSG00000024286) Cetn1 (ENSMUSG00000050996) Colec12 (ENSMUSG00000036103) Thoc1 (ENSMUSG00000024287) Mus_C ANCESTRAL SPECIES 16 ENSGT00940000156952 ENSGT00940000154926 ENSGT00940000153181.z.g.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00520000059545 ENSGT00940000157325.x ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000161191.A ENSGT01090000260098.B ENSGT00940000154453.a.b.b ENSGT00940000157209.jb ENSGT00950000183074.A ENSGT00390000016232 spretus MODERN SPECIES 9 Crem (MGP_SPRETEiJ_G0022880) Cul2 (MGP_SPRETEiJ_G0022881) Bambi (MGP_SPRETEiJ_G0022882) Lyzl1 (MGP_SPRETEiJ_G0022883) Map3k8 (MGP_SPRETEiJ_G0022884) Mtpap (MGP_SPRETEiJ_G0022885) Jcad (MGP_SPRETEiJ_G0022886) Svil (MGP_SPRETEiJ_G0022887) Zfp438 (MGP_SPRETEiJ_G0022888) Zeb1 (MGP_SPRETEiJ_G0022889) ##22 Arhgap12 (MGP_SPRETEiJ_G0022890) ##27 Kif5b (MGP_SPRETEiJ_G0022891) Epc1 (MGP_SPRETEiJ_G0022892) 4921524L21Rik (MGP_SPRETEiJ_G0022893) Rab18 (MGP_SPRETEiJ_G0022894) Mkx (MGP_SPRETEiJ_G0022895) Odad2 (MGP_SPRETEiJ_G0022896) Mpp7 (MGP_SPRETEiJ_G0022897) Wac (MGP_SPRETEiJ_G0022898) Fzd8 (MGP_SPRETEiJ_G0022899) Gjd4 (MGP_SPRETEiJ_G0022900) Ccny (MGP_SPRETEiJ_G0022901) Cetn1 (MGP_SPRETEiJ_G0022902) Colec12 (MGP_SPRETEiJ_G0022903) MGP_SPRETEiJ_G0022904 Steppe mouse MODERN SPECIES 3234 Crem (ENSMSIG00000021310) Cul2 (ENSMSIG00000021240) ENSMSIG00000021213 Bambi (ENSMSIG00000021200) ENSMSIG00000021196 ENSMSIG00000021191 ENSMSIG00000021186 Map3k8 (ENSMSIG00000021174) Mtpap (ENSMSIG00000021163) Jcad (ENSMSIG00000021144) ENSMSIG00000021138 Svil (ENSMSIG00000019710) Zfp438 (ENSMSIG00000019631) Zeb1 (ENSMSIG00000019545) ##22 Arhgap12 (ENSMSIG00000019302) ##27 Kif5b (ENSMSIG00000019257) Epc1 (ENSMSIG00000019175) Ryukyu mouse MODERN SPECIES 9 Crem (MGP_CAROLIEiJ_G0021964) Cul2 (MGP_CAROLIEiJ_G0021965) Bambi (MGP_CAROLIEiJ_G0021966) Lyzl1 (MGP_CAROLIEiJ_G0021967) Map3k8 (MGP_CAROLIEiJ_G0021968) Mtpap (MGP_CAROLIEiJ_G0021969) Jcad (MGP_CAROLIEiJ_G0021970) Svil (MGP_CAROLIEiJ_G0021971) Zfp438 (MGP_CAROLIEiJ_G0021972) Zeb1 (MGP_CAROLIEiJ_G0021973) ##22 Arhgap12 (MGP_CAROLIEiJ_G0021974) ##27 Kif5b (MGP_CAROLIEiJ_G0021975) Epc1 (MGP_CAROLIEiJ_G0021976) 4921524L21Rik (MGP_CAROLIEiJ_G0021977) Rab18 (MGP_CAROLIEiJ_G0021978) Mkx (MGP_CAROLIEiJ_G0021979) Odad2 (MGP_CAROLIEiJ_G0021980) Mpp7 (MGP_CAROLIEiJ_G0021981) Wac (MGP_CAROLIEiJ_G0021982) Fzd8 (MGP_CAROLIEiJ_G0021983) Gjd4 (MGP_CAROLIEiJ_G0021984) Ccny (MGP_CAROLIEiJ_G0021985) Cetn1 (MGP_CAROLIEiJ_G0021986) Colec12 (MGP_CAROLIEiJ_G0021987) MGP_CAROLIEiJ_G0021988 Shrew mouse MODERN SPECIES 6 Crem (MGP_PahariEiJ_G0018702) Cul2 (MGP_PahariEiJ_G0018703) Bambi (MGP_PahariEiJ_G0018704) Lyzl1 (MGP_PahariEiJ_G0018705) Map3k8 (MGP_PahariEiJ_G0018706) Mtpap (MGP_PahariEiJ_G0018707) Jcad (MGP_PahariEiJ_G0018708) Svil (MGP_PahariEiJ_G0018709) Zfp438 (MGP_PahariEiJ_G0018710) Zeb1 (MGP_PahariEiJ_G0018711) ##22 MGP_PahariEiJ_G0018712 ##27 Kif5b (MGP_PahariEiJ_G0018713) Epc1 (MGP_PahariEiJ_G0018714) 4921524L21Rik (MGP_PahariEiJ_G0018715) Rab18 (MGP_PahariEiJ_G0018716) Mkx (MGP_PahariEiJ_G0018717) Odad2 (MGP_PahariEiJ_G0018718) Mpp7 (MGP_PahariEiJ_G0018719) Wac (MGP_PahariEiJ_G0018720) Fzd8 (MGP_PahariEiJ_G0018721) Gjd4 (MGP_PahariEiJ_G0018722) Ccny (MGP_PahariEiJ_G0018723) Cetn1 (MGP_PahariEiJ_G0018724) Colec12 (MGP_PahariEiJ_G0018725) Thoc1 (MGP_PahariEiJ_G0018726) Rat MODERN SPECIES 8 RGD1564129 (ENSRNOG00000042120) Epc1 (ENSRNOG00000014834) Crem (ENSRNOG00000014900) ENSRNOG00000064489 Cul2 (ENSRNOG00000015292) RGD1564129 (ENSRNOG00000063038) Bambi (ENSRNOG00000016066) Lyzl1 (ENSRNOG00000016295) Map3k8 (ENSRNOG00000016378) Mtpap (ENSRNOG00000016578) Jcad (ENSRNOG00000027938) Svil (ENSRNOG00000018110) LOC103694107 (ENSRNOG00000063738) Zfp438 (ENSRNOG00000028329) ENSRNOG00000067560 Zeb1 (ENSRNOG00000017863) ##22 Arhgap12 (ENSRNOG00000017791) ##27 Kif5b (ENSRNOG00000017466) B3galnt2 (ENSRNOG00000016855) Tbce (ENSRNOG00000029667) Ggps1 (ENSRNOG00000016767) Arid4b (ENSRNOG00000016391) ENSRNOG00000064563 Rbbp4-ps2 (ENSRNOG00000021292) Hecw1 (ENSRNOG00000016046) Mrpl32 (ENSRNOG00000015989) Psma2 (ENSRNOG00000049920) RGD1308147 (ENSRNOG00000015523) Gabpb1l (ENSRNOG00000053439) Psme1-ps1 (ENSRNOG00000061359) Gli3 (ENSRNOG00000014395) Laurasiatheria ANCESTRAL SPECIES 27 ENSGT00940000162459 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000003031 ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183208.B ##22 Common shrew MODERN SPECIES 3433 ZEB1 (ENSSARG00000010985) ##22 Hedgehog MODERN SPECIES 4482 ZEB1 (ENSEEUG00000006386) ##22 Laurasiatheria_a ANCESTRAL SPECIES 22 ENSGT00940000162459 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000003031 ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Laurasiatheria_b ANCESTRAL SPECIES 22 ENSGT00550000074836 ENSGT00940000162459 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Laurasiatheria_c ANCESTRAL SPECIES 27 ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Chiroptera ANCESTRAL SPECIES 77 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625.u ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169.b ENSGT00940000157169.a ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Microchiroptera ANCESTRAL SPECIES 64 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625.u ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169.b ENSGT00940000157169.a ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Microbat MODERN SPECIES 966 ENSMLUG00000008212 MKX (ENSMLUG00000012366) RAB18 (ENSMLUG00000027295) ENSMLUG00000028015 WAC (ENSMLUG00000006270) BAMBI (ENSMLUG00000001400) MAP3K8 (ENSMLUG00000005702) MTPAP (ENSMLUG00000000214) JCAD (ENSMLUG00000016037) SVIL (ENSMLUG00000001090) ZNF438 (ENSMLUG00000012312) ENSMLUG00000022603 ENSMLUG00000025319 ZEB1 (ENSMLUG00000010631) ##22 ENSMLUG00000026982 ARHGAP12 (ENSMLUG00000011416) ##27 KIF5B (ENSMLUG00000001113) EPC1 (ENSMLUG00000007630) ENSMLUG00000027106 ITGB1 (ENSMLUG00000017570) NRP1 (ENSMLUG00000000911) ENSMLUG00000027740 PARD3 (ENSMLUG00000014963) ENSMLUG00000029552 ENSMLUG00000017379 CREM (ENSMLUG00000015031) CCNY (ENSMLUG00000013228) GJD4 (ENSMLUG00000005047) ENSMLUG00000028517 Greater horseshoe bat MODERN SPECIES 23 RAB18 (ENSRFEG00010003204) MKX (ENSRFEG00010003250) ODAD2 (ENSRFEG00010003287) MPP7 (ENSRFEG00010003369) WAC (ENSRFEG00010003457) BAMBI (ENSRFEG00010003541) ENSRFEG00010003569 MAP3K8 (ENSRFEG00010003592) MTPAP (ENSRFEG00010003638) JCAD (ENSRFEG00010003660) ENSRFEG00010003686 SVIL (ENSRFEG00010003783) ZNF438 (ENSRFEG00010004040) ZEB1 (ENSRFEG00010004086) ##22 ARHGAP12 (ENSRFEG00010004189) ##27 KIF5B (ENSRFEG00010004301) EPC1 (ENSRFEG00010004367) ENSRFEG00010004449 ITGB1 (ENSRFEG00010004509) NRP1 (ENSRFEG00010004569) ENSRFEG00010004600 PARD3 (ENSRFEG00010004675) CUL2 (ENSRFEG00010004807) CREM (ENSRFEG00010004926) CCNY (ENSRFEG00010005023) GJD4 (ENSRFEG00010005039) FZD8 (ENSRFEG00010005044) ENSRFEG00010005049 ENSRFEG00010005054 Megabat MODERN SPECIES 1273 ZEB1 (ENSPVAG00000010088) ##22 Equus ANCESTRAL SPECIES 44 ENSGT00940000157002 ENSGT00550000074836 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00390000006922.m.b.b.a.z.s ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT00940000164808 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Donkey MODERN SPECIES 21 ENSEASG00005019093 WDR37 (ENSEASG00005019091) ENSEASG00005036647 GTPBP4 (ENSEASG00005019082) ENSEASG00005019068 ENSEASG00005018780 ENSEASG00005018588 ENSEASG00005007207 ENSEASG00005029914 ENSEASG00005007211 MAP3K8 (ENSEASG00005007213) MTPAP (ENSEASG00005007214) JCAD (ENSEASG00005007216) ENSEASG00005007388 ENSEASG00005010204 ENSEASG00005010209 ##22 ARHGAP12 (ENSEASG00005010218) ##27 ENSEASG00005024989 KIF5B (ENSEASG00005010230) EPC1 (ENSEASG00005010243) ENSEASG00005033424 ENSEASG00005010253 ENSEASG00005037940 ITGB1 (ENSEASG00005010256) NRP1 (ENSEASG00005010265) PARD3 (ENSEASG00005010276) CUL2 (ENSEASG00005010304) CREM (ENSEASG00005010309) CCNY (ENSEASG00005010314) GJD4 (ENSEASG00005010318) ENSEASG00005024704 Horse MODERN SPECIES 21 MASTL (ENSECAG00000012629) YME1L1 (ENSECAG00000000140) PTCHD3 (ENSECAG00000000063) RAB18 (ENSECAG00000017521) MKX (ENSECAG00000016778) ODAD2 (ENSECAG00000015255) MPP7 (ENSECAG00000012282) WAC (ENSECAG00000005374) BAMBI (ENSECAG00000003193) ENSECAG00000000289 MAP3K8 (ENSECAG00000000090) MTPAP (ENSECAG00000000001) JCAD (ENSECAG00000024077) SVIL (ENSECAG00000020932) ZNF438 (ENSECAG00000020904) ZEB1 (ENSECAG00000020102) ##22 ARHGAP12 (ENSECAG00000014289) ##27 ENSECAG00000058328 KIF5B (ENSECAG00000000558) EPC1 (ENSECAG00000024648) ENSECAG00000051850 ENSECAG00000060288 ITGB1 (ENSECAG00000022498) NRP1 (ENSECAG00000020753) PARD3 (ENSECAG00000016619) ENSECAG00000057191 CUL2 (ENSECAG00000015528) CREM (ENSECAG00000011220) ENSECAG00000052148 ENSECAG00000046479 ENSECAG00000049707 Carnivora ANCESTRAL SPECIES 26 ENSGT00550000074836 ENSGT00940000162459 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Caniformia ANCESTRAL SPECIES 30 ENSGT00550000074836 ENSGT00940000158727 ENSGT00940000164184 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Caniformia_b ANCESTRAL SPECIES 33 ENSGT00550000074836.k ENSGT00940000158727 ENSGT00940000164184 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Ursidae ANCESTRAL SPECIES 55 ENSGT00940000153661.b.b.m ENSGT00940000158727 ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Ursus ANCESTRAL SPECIES 171 ENSGT00940000153661.b.b.m ENSGT00940000158727 ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A Polar bear MODERN SPECIES 501 ENSUMAG00000015547 ENSUMAG00000015555 PTCHD3 (ENSUMAG00000015559) ENSUMAG00000015574 MKX (ENSUMAG00000015583) ODAD2 (ENSUMAG00000015629) MPP7 (ENSUMAG00000015750) ENSUMAG00000015777 BAMBI (ENSUMAG00000015892) ENSUMAG00000015896 MAP3K8 (ENSUMAG00000015900) MTPAP (ENSUMAG00000015907) JCAD (ENSUMAG00000015912) SVIL (ENSUMAG00000015924) ZNF438 (ENSUMAG00000015950) ZEB1 (ENSUMAG00000015956) ##22 ARHGAP12 (ENSUMAG00000015990) ##27 KIF5B (ENSUMAG00000016034) EPC1 (ENSUMAG00000016043) ENSUMAG00000016059 ITGB1 (ENSUMAG00000016082) NRP1 (ENSUMAG00000016091) PARD3 (ENSUMAG00000016128) CUL2 (ENSUMAG00000016283) CREM (ENSUMAG00000016850) CCNY (ENSUMAG00000016857) GJD4 (ENSUMAG00000016862) ENSUMAG00000016864 American black bear MODERN SPECIES 6173 ZEB1 (ENSUAMG00000002001) ##22 Giant Panda MODERN SPECIES 6 MASTL (ENSAMEG00000001855) ENSAMEG00000001795 ENSAMEG00000029020 ENSAMEG00000016008 ENSAMEG00000015990 ENSAMEG00000008177 ENSAMEG00000008122 WAC (ENSAMEG00000008096) BAMBI (ENSAMEG00000008094) ENSAMEG00000017083 MAP3K8 (ENSAMEG00000017079) MTPAP (ENSAMEG00000017072) JCAD (ENSAMEG00000017066) ENSAMEG00000017022 ENSAMEG00000017018 ENSAMEG00000010224 ##22 ARHGAP12 (ENSAMEG00000010255) ##27 KIF5B (ENSAMEG00000010295) EPC1 (ENSAMEG00000010349) ENSAMEG00000010372 ITGB1 (ENSAMEG00000017353) NRP1 (ENSAMEG00000017302) ENSAMEG00000024277 PARD3 (ENSAMEG00000015671) CUL2 (ENSAMEG00000007810) CREM (ENSAMEG00000007902) CCNY (ENSAMEG00000010506) ENSAMEG00000025294 ENSAMEG00000001935 ENSAMEG00000031487 ENSAMEG00000024029 Mustelinae ANCESTRAL SPECIES 202 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 Ferret MODERN SPECIES 421 SVIL (ENSMPUG00000012989) ZNF438 (ENSMPUG00000013021) ENSMPUG00000013026 ENSMPUG00000013030 ZEB1 (ENSMPUG00000013033) ##22 ARHGAP12 (ENSMPUG00000013040) ##27 KIF5B (ENSMPUG00000013053) EPC1 (ENSMPUG00000013065) ENSMPUG00000013066 ENSMPUG00000013067 American mink MODERN SPECIES 341 ZEB1 (ENSNVIG00000000332) ##22 ARHGAP12 (ENSNVIG00000000340) ##27 KIF5B (ENSNVIG00000000587) EPC1 (ENSNVIG00000000608) ENSNVIG00000000731 Canidae ANCESTRAL SPECIES 68 ENSGT01090000259987.a.b ENSGT00390000009751 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a Canis_lupus ANCESTRAL SPECIES 50 ENSGT00940000161777.a.c ENSGT00940000153661.b.b.n.a.a ENSGT00940000157325 ENSGT00940000156227.f ENSGT00440000037780.a.n ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00440000033408.a ENSGT00940000156390 ENSGT00940000154775.c.b.a ENSGT00950000182922.a.a.a.b.b.b.b.c ENSGT00410000028443 ENSGT00940000153451.a.b ENSGT00940000157711 ENSGT00940000156678 ENSGT00390000015971 ENSGT00940000156042 ENSGT00900000141099 ENSGT00950000185487 Dingo MODERN SPECIES 235 ENSCAFG00020026755 BAMBI (ENSCAFG00020026748) ENSCAFG00020026747 ENSCAFG00020026741 MAP3K8 (ENSCAFG00020026736) MTPAP (ENSCAFG00020026734) JCAD (ENSCAFG00020026729) SVIL (ENSCAFG00020026434) ZNF438 (ENSCAFG00020026364) ZEB1 (ENSCAFG00020026358) ##22 ARHGAP12 (ENSCAFG00020026318) ##27 KIF5B (ENSCAFG00020026240) EPC1 (ENSCAFG00020026229) ENSCAFG00020026228 ENSCAFG00020026223 ENSCAFG00020026220 ENSCAFG00020026219 PLXDC2 (ENSCAFG00020026213) ENSCAFG00020026210 ENSCAFG00020026209 ENSCAFG00020026207 ENSCAFG00020026206 ENSCAFG00020026205 ENSCAFG00020026203 SKIDA1 (ENSCAFG00020026202) Dog MODERN SPECIES 11 ENSCAFG00845012328 ENSCAFG00845012288 ENSCAFG00845012230 ENSCAFG00845012195 ENSCAFG00845012180 MPP7 (ENSCAFG00845011908) ENSCAFG00845011848 ENSCAFG00845011742 BAMBI (ENSCAFG00845011687) ENSCAFG00845011606 MAP3K8 (ENSCAFG00845011569) MTPAP (ENSCAFG00845011540) ENSCAFG00845011470 SVIL (ENSCAFG00845010786) ZNF438 (ENSCAFG00845010590) ZEB1 (ENSCAFG00845010369) ##22 ARHGAP12 (ENSCAFG00845010136) ##27 KIF5B (ENSCAFG00845009863) ENSCAFG00845009793 EPC1 (ENSCAFG00845009578) ENSCAFG00845009208 NEBL (ENSCAFG00845008851) ENSCAFG00845008769 ENSCAFG00845008752 SKIDA1 (ENSCAFG00845008698) ENSCAFG00845008676 MLLT10 (ENSCAFG00845008310) DNAJC1 (ENSCAFG00845008124) COMMD3 (ENSCAFG00845008000) SPAG6 (ENSCAFG00845007631) ENSCAFG00845007460 Red fox MODERN SPECIES 34 MKX (ENSVVUG00000001722) ODAD2 (ENSVVUG00000001752) ENSVVUG00000001780 MPP7 (ENSVVUG00000001838) ENSVVUG00000001929 WAC (ENSVVUG00000001960) ENSVVUG00000002027 BAMBI (ENSVVUG00000002038) ENSVVUG00000002064 MAP3K8 (ENSVVUG00000002070) MTPAP (ENSVVUG00000002094) JCAD (ENSVVUG00000002113) SVIL (ENSVVUG00000002406) ZNF438 (ENSVVUG00000004534) ENSVVUG00000004535 ZEB1 (ENSVVUG00000004560) ##22 ARHGAP12 (ENSVVUG00000004593) ##27 KIF5B (ENSVVUG00000004626) EPC1 (ENSVVUG00000004635) RBMS3 (ENSVVUG00000004660) TGFBR2 (ENSVVUG00000004787) GADL1 (ENSVVUG00000004801) ENSVVUG00000004829 STT3B (ENSVVUG00000004861) ENSVVUG00000004917 GPD1L (ENSVVUG00000004928) CMTM8 (ENSVVUG00000004935) ENSVVUG00000004948 CMTM6 (ENSVVUG00000004949) DYNC1LI1 (ENSVVUG00000004971) POMGNT2 (ENSVVUG00000005131) Felidae ANCESTRAL SPECIES 2 ENSGT00550000074836 ENSGT00940000162459 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000161720 ENSGT00940000159668 ENSGT00510000049725 Panthera ANCESTRAL SPECIES ENSGT00550000074836 ENSGT00940000162459 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000153288.a.a ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000169601 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000161720 Tiger MODERN SPECIES 392 RAB18 (ENSPTIG00000011667) MKX (ENSPTIG00000014916) ODAD2 (ENSPTIG00000016241) MPP7 (ENSPTIG00000018026) WAC (ENSPTIG00000005848) BAMBI (ENSPTIG00000008251) ENSPTIG00000008949 MAP3K8 (ENSPTIG00000010418) MTPAP (ENSPTIG00000011190) JCAD (ENSPTIG00000011740) SVIL (ENSPTIG00000012492) ZNF438 (ENSPTIG00000020579) ZEB1 (ENSPTIG00000006311) ##22 ARHGAP12 (ENSPTIG00000011757) ##27 KIF5B (ENSPTIG00000017783) ENSPTIG00000019126 EPC1 (ENSPTIG00000019741) ENSPTIG00000021875 ITGB1 (ENSPTIG00000007747) NRP1 (ENSPTIG00000011209) PARD3 (ENSPTIG00000015304) CUL2 (ENSPTIG00000020219) ENSPTIG00000007677 ENSPTIG00000011397 ENSPTIG00000018437 CCNY (ENSPTIG00000018884) GJD4 (ENSPTIG00000020704) USP18 (ENSPTIG00000020974) Panthera_a ANCESTRAL SPECIES 5 ENSGT00550000074836 ENSGT00940000162459 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000153288.a.a ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000169601 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000161720 lion MODERN SPECIES 7 MASTL (ENSPLOG00000022550) YME1L1 (ENSPLOG00000022568) ENSPLOG00000022583 RAB18 (ENSPLOG00000022590) MKX (ENSPLOG00000022600) ODAD2 (ENSPLOG00000022628) MPP7 (ENSPLOG00000022647) WAC (ENSPLOG00000000751) BAMBI (ENSPLOG00000000795) ENSPLOG00000000819 MAP3K8 (ENSPLOG00000000834) MTPAP (ENSPLOG00000000850) JCAD (ENSPLOG00000000877) SVIL (ENSPLOG00000000943) ZNF438 (ENSPLOG00000001015) ZEB1 (ENSPLOG00000001100) ##22 ARHGAP12 (ENSPLOG00000001216) ##27 KIF5B (ENSPLOG00000001325) ENSPLOG00000001404 EPC1 (ENSPLOG00000001449) ENSPLOG00000001575 ITGB1 (ENSPLOG00000001644) NRP1 (ENSPLOG00000001769) PARD3 (ENSPLOG00000002000) CUL2 (ENSPLOG00000002139) CREM (ENSPLOG00000002387) CCNY (ENSPLOG00000002575) GJD4 (ENSPLOG00000002610) FZD8 (ENSPLOG00000002626) ENSPLOG00000002655 USP18 (ENSPLOG00000002674) leopard MODERN SPECIES 45 ANKRD26 (ENSPPRG00000009393) ENSPPRG00000009693 RAB18 (ENSPPRG00000010314) MKX (ENSPPRG00000010709) ODAD2 (ENSPPRG00000011902) MPP7 (ENSPPRG00000012483) WAC (ENSPPRG00000013451) BAMBI (ENSPPRG00000013667) ENSPPRG00000014725 MAP3K8 (ENSPPRG00000015038) MTPAP (ENSPPRG00000015326) JCAD (ENSPPRG00000015694) SVIL (ENSPPRG00000022325) ZNF438 (ENSPPRG00000025002) ENSPPRG00000024989 ZEB1 (ENSPPRG00000024896) ##22 ARHGAP12 (ENSPPRG00000024715) ##27 KIF5B (ENSPPRG00000024618) ENSPPRG00000014508 EPC1 (ENSPPRG00000024340) ENSPPRG00000023715 ITGB1 (ENSPPRG00000023118) NRP1 (ENSPPRG00000003189) PARD3 (ENSPPRG00000010013) CUL2 (ENSPPRG00000012458) ENSPPRG00000014042 ENSPPRG00000019205 ENSPPRG00000024697 CCNY (ENSPPRG00000024417) GJD4 (ENSPPRG00000024358) FZD8 (ENSPPRG00000014780) Cat MODERN SPECIES 238 MASTL (ENSFCAG00000014240) YME1L1 (ENSFCAG00000014238) ENSFCAG00000040569 RAB18 (ENSFCAG00000027161) MKX (ENSFCAG00000004227) ODAD2 (ENSFCAG00000031885) MPP7 (ENSFCAG00000008868) WAC (ENSFCAG00000023101) BAMBI (ENSFCAG00000045299) ENSFCAG00000004670 MAP3K8 (ENSFCAG00000004397) MTPAP (ENSFCAG00000019348) JCAD (ENSFCAG00000031219) SVIL (ENSFCAG00000009639) ZNF438 (ENSFCAG00000009637) ZEB1 (ENSFCAG00000010440) ##22 ARHGAP12 (ENSFCAG00000027689) ##27 KIF5B (ENSFCAG00000024269) EPC1 (ENSFCAG00000023583) ENSFCAG00000021897 ENSFCAG00000029110 ITGB1 (ENSFCAG00000019338) NRP1 (ENSFCAG00000006226) PARD3 (ENSFCAG00000009104) CUL2 (ENSFCAG00000025550) CREM (ENSFCAG00000043654) CCNY (ENSFCAG00000023006) ENSFCAG00000040399 FZD8 (ENSFCAG00000029299) USP18 (ENSFCAG00000030232) TUBA8 (ENSFCAG00000009946) Artiodactyla ANCESTRAL SPECIES 32 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000003031 ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a Suina ANCESTRAL SPECIES 43 ENSGT01050000244898.a.a.a.b ENSGT00940000163669 ENSGT00940000156081 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000158727 ENSGT00940000155299.A ENSGT00390000016416 ENSGT00940000156146 ENSGT01030000234535.B ENSGT00530000062962.a.b ENSGT00940000157171 ENSGT00390000015525 ENSGT01050000244842.a.a.b ENSGT00940000157914 ENSGT00950000182837.a.b.a ENSGT00940000155370 Pig MODERN SPECIES 1 RAB18 (ENSSSCG00000028655) MKX (ENSSSCG00000029783) ODAD2 (ENSSSCG00000011069) ENSSSCG00000033904 MPP7 (ENSSSCG00000011070) ENSSSCG00000056325 WAC (ENSSSCG00000011013) BAMBI (ENSSSCG00000011014) ENSSSCG00000039256 ENSSSCG00000035848 MAP3K8 (ENSSSCG00000020705) MTPAP (ENSSSCG00000011018) JCAD (ENSSSCG00000011020) SVIL (ENSSSCG00000011022) ZNF438 (ENSSSCG00000011023) ZEB1 (ENSSSCG00000011025) ##22 ARHGAP12 (ENSSSCG00000011026) ##27 ENSSSCG00000056707 KIF5B (ENSSSCG00000011027) ENSSSCG00000045198 ENSSSCG00000051254 EPC1 (ENSSSCG00000011028) ENSSSCG00000055608 PTCHD3 (ENSSSCG00000022045) ENSSSCG00000048231 CUBN (ENSSSCG00000011030) TRDMT1 (ENSSSCG00000021309) VIM (ENSSSCG00000011033) ST8SIA6 (ENSSSCG00000011034) ENSSSCG00000046521 ENSSSCG00000026941 Chacoan peccary MODERN SPECIES 914 ENSCWAG00000018522 MFSD14B (ENSCWAG00000018543) RAB18 (ENSCWAG00000018627) MKX (ENSCWAG00000018817) ODAD2 (ENSCWAG00000018853) MPP7 (ENSCWAG00000018934) WAC (ENSCWAG00000019006) BAMBI (ENSCWAG00000019107) ENSCWAG00000019131 ENSCWAG00000019146 MAP3K8 (ENSCWAG00000019170) MTPAP (ENSCWAG00000019204) JCAD (ENSCWAG00000011758) SVIL (ENSCWAG00000011924) ENSCWAG00000013849 ZEB1 (ENSCWAG00000013953) ##22 ARHGAP12 (ENSCWAG00000014222) ##27 KIF5B (ENSCWAG00000014452) EPC1 (ENSCWAG00000014516) ENSCWAG00000014737 ENSCWAG00000014881 CUBN (ENSCWAG00000014947) TRDMT1 (ENSCWAG00000015479) VIM (ENSCWAG00000015549) ST8SIA6 (ENSCWAG00000015629) HACD1 (ENSCWAG00000015751) STAM (ENSCWAG00000015782) TMEM236 (ENSCWAG00000015817) MRC1 (ENSCWAG00000015855) SLC39A12 (ENSCWAG00000016047) CACNB2 (ENSCWAG00000016665) Artiodactyla_a ANCESTRAL SPECIES 33 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00390000003031 ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a Camelidae ANCESTRAL SPECIES 120 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 Arabian camel MODERN SPECIES 28 MAP3K8 (ENSCDRG00005010773) MTPAP (ENSCDRG00005010720) JCAD (ENSCDRG00005010696) SVIL (ENSCDRG00005009382) ENSCDRG00005009267 ZNF438 (ENSCDRG00005009205) ZEB1 (ENSCDRG00005009025) ##22 ARHGAP12 (ENSCDRG00005021840) ##27 KIF5B (ENSCDRG00005019986) DIP2C (ENSCDRG00005019677) ZMYND11 (ENSCDRG00005019468) ENSCDRG00005019432 CAMK1D (ENSCDRG00005019403) CDC123 (ENSCDRG00005019291) NUDT5 (ENSCDRG00005019266) SEC61A2 (ENSCDRG00005019214) ENSCDRG00005019199 DHTKD1 (ENSCDRG00005019133) ENSCDRG00005019117 ENSCDRG00005019100 ENSCDRG00005019079 LARP4B (ENSCDRG00005019054) Alpaca MODERN SPECIES 1057 ZEB1 (ENSVPAG00000001316) ##22 Artiodactyla_b ANCESTRAL SPECIES 27 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 Cetacea ANCESTRAL SPECIES 2 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171.a ENSGT00530000062962.a.b ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 Odontoceti ANCESTRAL SPECIES 2 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171.a ENSGT00530000062962.a.b ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171.a ENSGT00530000062962.a.b ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171.a ENSGT00530000062962.a.b ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 Monodontidae ANCESTRAL SPECIES 22 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171.a ENSGT00530000062962.a.b ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 Narwhal MODERN SPECIES 308 ENSMMNG00015009594 RAB18 (ENSMMNG00015009630) ENSMMNG00015009656 ODAD2 (ENSMMNG00015009672) MPP7 (ENSMMNG00015009699) WAC (ENSMMNG00015009741) BAMBI (ENSMMNG00015009777) ENSMMNG00015009792 MAP3K8 (ENSMMNG00015009804) MTPAP (ENSMMNG00015009838) JCAD (ENSMMNG00015009858) SVIL (ENSMMNG00015009882) ZNF438 (ENSMMNG00015009919) ZEB1 (ENSMMNG00015009952) ##22 ENSMMNG00015010014 ##27 KIF5B (ENSMMNG00015010082) EPC1 (ENSMMNG00015010126) NSUN6 (ENSMMNG00015011825) CACNB2 (ENSMMNG00015012153) SLC39A12 (ENSMMNG00015012761) MRC1 (ENSMMNG00015012890) TMEM236 (ENSMMNG00015012921) STAM (ENSMMNG00015012944) HACD1 (ENSMMNG00015013001) ST8SIA6 (ENSMMNG00015013019) VIM (ENSMMNG00015013035) TRDMT1 (ENSMMNG00015013057) CUBN (ENSMMNG00015013087) RSU1 (ENSMMNG00015013159) Beluga whale MODERN SPECIES 22 ENSDLEG00000005278 RAB18 (ENSDLEG00000005271) MKX (ENSDLEG00000005262) ARMC4 (ENSDLEG00000005237) MPP7 (ENSDLEG00000005224) WAC (ENSDLEG00000005197) BAMBI (ENSDLEG00000005187) ENSDLEG00000005181 MAP3K8 (ENSDLEG00000005174) MTPAP (ENSDLEG00000005158) JCAD (ENSDLEG00000005152) SVIL (ENSDLEG00000005140) ZNF438 (ENSDLEG00000005135) ZEB1 (ENSDLEG00000005124) ##22 ENSDLEG00000004999 ##27 KIF5B (ENSDLEG00000004901) EPC1 (ENSDLEG00000004886) NSUN6 (ENSDLEG00000004870) CACNB2 (ENSDLEG00000004854) SLC39A12 (ENSDLEG00000004830) MRC1 (ENSDLEG00000004805) TMEM236 (ENSDLEG00000004796) STAM (ENSDLEG00000004781) HACD1 (ENSDLEG00000004764) ENSDLEG00000004758 ST8SIA6 (ENSDLEG00000004749) VIM (ENSDLEG00000004737) TRDMT1 (ENSDLEG00000004726) CUBN (ENSDLEG00000004027) Vaquita MODERN SPECIES 11 ENSPSNG00000002606 RAB18 (ENSPSNG00000002650) ENSPSNG00000002720 ODAD2 (ENSPSNG00000002743) MPP7 (ENSPSNG00000002785) WAC (ENSPSNG00000002822) BAMBI (ENSPSNG00000002871) ENSPSNG00000002885 MAP3K8 (ENSPSNG00000002907) MTPAP (ENSPSNG00000002929) JCAD (ENSPSNG00000002960) SVIL (ENSPSNG00000002977) ZNF438 (ENSPSNG00000003063) ZEB1 (ENSPSNG00000003104) ##22 ARHGAP12 (ENSPSNG00000003162) ##27 KIF5B (ENSPSNG00000003253) EPC1 (ENSPSNG00000003323) NSUN6 (ENSPSNG00000003360) ENSPSNG00000003389 CACNB2 (ENSPSNG00000003719) SLC39A12 (ENSPSNG00000004280) MRC1 (ENSPSNG00000004387) TMEM236 (ENSPSNG00000004445) ENSPSNG00000004467 HACD1 (ENSPSNG00000004481) ST8SIA6 (ENSPSNG00000004511) VIM (ENSPSNG00000004537) TRDMT1 (ENSPSNG00000004562) CUBN (ENSPSNG00000004912) Dolphin MODERN SPECIES 979 ZEB1 (ENSTTRG00000011798) ##22 Sperm whale MODERN SPECIES 2 ENSPCTG00005002802 ENSPCTG00005002813 PTCHD3 (ENSPCTG00005002838) RAB18 (ENSPCTG00005002885) MKX (ENSPCTG00005003024) ODAD2 (ENSPCTG00005003039) MPP7 (ENSPCTG00005003056) WAC (ENSPCTG00005003081) BAMBI (ENSPCTG00005003128) ENSPCTG00005003138 MAP3K8 (ENSPCTG00005003148) MTPAP (ENSPCTG00005003161) ENSPCTG00005003187 SVIL (ENSPCTG00005003220) ZNF438 (ENSPCTG00005003363) ZEB1 (ENSPCTG00005003401) ##22 ARHGAP12 (ENSPCTG00005003454) ##27 KIF5B (ENSPCTG00005003538) EPC1 (ENSPCTG00005003600) NSUN6 (ENSPCTG00005003659) CACNB2 (ENSPCTG00005003907) MRC1 (ENSPCTG00005007442) MRC1 (ENSPCTG00005007647) TMEM236 (ENSPCTG00005007727) ENSPCTG00005007748 HACD1 (ENSPCTG00005007805) ST8SIA6 (ENSPCTG00005007834) VIM (ENSPCTG00005007862) TRDMT1 (ENSPCTG00005007915) CUBN (ENSPCTG00005008099) RSU1 (ENSPCTG00005008293) Blue whale MODERN SPECIES 11 PTCHD3 (ENSBMSG00010005096) RAB18 (ENSBMSG00010005119) MKX (ENSBMSG00010005155) ODAD2 (ENSBMSG00010005173) MPP7 (ENSBMSG00010005202) WAC (ENSBMSG00010005229) BAMBI (ENSBMSG00010005280) ENSBMSG00010005295 MAP3K8 (ENSBMSG00010005314) MTPAP (ENSBMSG00010005337) JCAD (ENSBMSG00010005345) SVIL (ENSBMSG00010005405) ZNF438 (ENSBMSG00010005812) ZEB1 (ENSBMSG00010005862) ##22 ENSBMSG00010005938 ##27 KIF5B (ENSBMSG00010006140) EPC1 (ENSBMSG00010006327) NSUN6 (ENSBMSG00010000003) CACNB2 (ENSBMSG00010000242) SLC39A12 (ENSBMSG00010002610) MRC1 (ENSBMSG00010002635) TMEM236 (ENSBMSG00010002660) ENSBMSG00010002668 HACD1 (ENSBMSG00010002679) ST8SIA6 (ENSBMSG00010002690) ENSBMSG00010002705 VIM (ENSBMSG00010002717) TRDMT1 (ENSBMSG00010002733) ENSBMSG00010002741 Pecora ANCESTRAL SPECIES 9 ENSGT00950000183000.c.a.b ENSGT00390000016976 ENSGT00940000156965 ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.l ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 Yarkand deer MODERN SPECIES 15 ENSCHYG00000016784 PCSK2 (ENSCHYG00000016518) ENSCHYG00000016214 MKX (ENSCHYG00000016041) ODAD2 (ENSCHYG00000015912) ENSCHYG00000015461 WAC (ENSCHYG00000015166) BAMBI (ENSCHYG00000015113) ENSCHYG00000014977 MAP3K8 (ENSCHYG00000014864) MTPAP (ENSCHYG00000014688) JCAD (ENSCHYG00000014634) ENSCHYG00000014570 SVIL (ENSCHYG00000013800) ZNF438 (ENSCHYG00000013696) ZEB1 (ENSCHYG00000024350) ##22 ARHGAP12 (ENSCHYG00000023950) ##27 KIF5B (ENSCHYG00000023791) EPC1 (ENSCHYG00000023581) NSUN6 (ENSCHYG00000023455) CACNB2 (ENSCHYG00000020467) SLC39A12 (ENSCHYG00000020036) ENSCHYG00000020009 MRC1 (ENSCHYG00000018709) STAM (ENSCHYG00000018548) HACD1 (ENSCHYG00000017477) ST8SIA6 (ENSCHYG00000017336) VIM (ENSCHYG00000017204) TRDMT1 (ENSCHYG00000017043) ENSCHYG00000016991 ENSCHYG00000016959 Percora_a ANCESTRAL SPECIES 10 ENSGT00950000183000.c.a.b ENSGT00390000016976 ENSGT00940000156965 ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.l ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 Siberian musk deer MODERN SPECIES 1194 ENSMMSG00000020825 RAB18 (ENSMMSG00000020854) MKX (ENSMMSG00000021025) ODAD2 (ENSMMSG00000021069) ENSMMSG00000021160 WAC (ENSMMSG00000021254) BAMBI (ENSMMSG00000021393) ENSMMSG00000021407 ENSMMSG00000021435 MAP3K8 (ENSMMSG00000021453) ENSMMSG00000021468 MTPAP (ENSMMSG00000021481) JCAD (ENSMMSG00000021503) SVIL (ENSMMSG00000021607) ZNF438 (ENSMMSG00000022314) ZEB1 (ENSMMSG00000022330) ##22 ARHGAP12 (ENSMMSG00000022385) ##27 KIF5B (ENSMMSG00000022465) EPC1 (ENSMMSG00000022508) NSUN6 (ENSMMSG00000022563) CACNB2 (ENSMMSG00000022644) SLC39A12 (ENSMMSG00000022883) MRC1 (ENSMMSG00000022996) TMEM236 (ENSMMSG00000023008) STAM (ENSMMSG00000023014) HACD1 (ENSMMSG00000004759) ST8SIA6 (ENSMMSG00000004799) VIM (ENSMMSG00000004853) ENSMMSG00000004895 TRDMT1 (ENSMMSG00000004916) CUBN (ENSMMSG00000005129) Bovidae ANCESTRAL SPECIES 10 ENSGT00950000183000.c.a.b ENSGT00390000016976 ENSGT00940000156965 ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.l ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 Caprinae ANCESTRAL SPECIES 23 ENSGT00940000153661.a.a.d ENSGT00940000157325 ENSGT00940000156227.f ENSGT00390000015224.c.b.a ENSGT00940000156625 ENSGT00940000156232.b.l ENSGT00390000008403.cb.b.d ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 Goat MODERN SPECIES 4 RAB18 (ENSCHIG00000008749) MKX (ENSCHIG00000021913) ENSCHIG00000025949 ODAD2 (ENSCHIG00000005917) ENSCHIG00000024362 ENSCHIG00000018589 WAC (ENSCHIG00000022497) BAMBI (ENSCHIG00000015150) ENSCHIG00000022034 MAP3K8 (ENSCHIG00000017886) MTPAP (ENSCHIG00000025725) JCAD (ENSCHIG00000013597) ENSCHIG00000023018 SVIL (ENSCHIG00000016403) ZNF438 (ENSCHIG00000013980) ZEB1 (ENSCHIG00000016385) ##22 ARHGAP12 (ENSCHIG00000024718) ##27 KIF5B (ENSCHIG00000019020) EPC1 (ENSCHIG00000005911) NSUN6 (ENSCHIG00000012618) CACNB2 (ENSCHIG00000001734) SLC39A12 (ENSCHIG00000024612) MRC1 (ENSCHIG00000023775) TMEM236 (ENSCHIG00000002738) STAM (ENSCHIG00000004568) HACD1 (ENSCHIG00000026086) ST8SIA6 (ENSCHIG00000026819) VIM (ENSCHIG00000020459) TRDMT1 (ENSCHIG00000017788) CUBN (ENSCHIG00000019577) RSU1 (ENSCHIG00000015471) Rambouillet Sheep MODERN SPECIES 4 ENSOARG00020021206 MKX (ENSOARG00020021159) ENSOARG00020021134 ARMC4 (ENSOARG00020020913) MPP7 (ENSOARG00020020800) ENSOARG00020020767 ENSOARG00020020742 WAC (ENSOARG00020020370) BAMBI (ENSOARG00020020313) ENSOARG00020020264 MAP3K8 (ENSOARG00020020195) MTPAP (ENSOARG00020020144) JCAD (ENSOARG00020020123) ENSOARG00020020101 SVIL (ENSOARG00020018385) ZEB1 (ENSOARG00020017442) ##22 ARHGAP12 (ENSOARG00020015348) ##27 ENSOARG00020015209 KIF5B (ENSOARG00020014964) ENSOARG00020014851 EPC1 (ENSOARG00020014149) NSUN6 (ENSOARG00020013758) ENSOARG00020013702 CACNB2 (ENSOARG00020006219) SLC39A12 (ENSOARG00020005721) ENSOARG00020005707 STAM (ENSOARG00020005528) HACD1 (ENSOARG00020005459) ST8SIA6 (ENSOARG00020005407) VIM (ENSOARG00020005389) TRDMT1 (ENSOARG00020005317) Bovinae ANCESTRAL SPECIES 20 ENSGT00940000157263.d.b ENSGT00390000011926.b ENSGT00940000156965 ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.l ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 American bison MODERN SPECIES 3321 ENSBBBG00000012225 PCSK2 (ENSBBBG00000007070) ENSBBBG00000012263 ENSBBBG00000012279 MKX (ENSBBBG00000002316) ODAD2 (ENSBBBG00000012296) MPP7 (ENSBBBG00000007071) WAC (ENSBBBG00000012353) BAMBI (ENSBBBG00000007306) ENSBBBG00000012362 MAP3K8 (ENSBBBG00000012373) MTPAP (ENSBBBG00000002348) JCAD (ENSBBBG00000002349) SVIL (ENSBBBG00000012559) ENSBBBG00000012576 ZEB1 (ENSBBBG00000012628) ##22 ARHGAP12 (ENSBBBG00000012781) ##27 KIF5B (ENSBBBG00000012809) EPC1 (ENSBBBG00000012832) NSUN6 (ENSBBBG00000012847) CACNB2 (ENSBBBG00000013199) SLC39A12 (ENSBBBG00000001627) MRC1 (ENSBBBG00000013312) TMEM236 (ENSBBBG00000001611) STAM (ENSBBBG00000013330) HACD1 (ENSBBBG00000013342) ST8SIA6 (ENSBBBG00000013364) VIM (ENSBBBG00000001580) TRDMT1 (ENSBBBG00000001568) CUBN (ENSBBBG00000013554) RSU1 (ENSBBBG00000013588) Bos ANCESTRAL SPECIES 22 ENSGT00390000016976 ENSGT00940000157263.d.b ENSGT00390000011926.b ENSGT00940000156965 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.l ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT01100000263481.n.a.b.a.a.a.a.a.b.a.b ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A Bos_b ANCESTRAL SPECIES 4 ENSGT00390000016976 ENSGT00940000157263.d.b ENSGT00390000011926.b ENSGT00940000156965 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.l ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT01100000263481.n.a.b.a.a.a.a.a.b.a.b ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A Cow MODERN SPECIES 4 PCSK2 (ENSBTAG00000008687) ENSBTAG00000053629 RAB18 (ENSBTAG00000009871) MKX (ENSBTAG00000007678) ODAD2 (ENSBTAG00000000654) MPP7 (ENSBTAG00000017354) WAC (ENSBTAG00000018263) BAMBI (ENSBTAG00000003045) ENSBTAG00000051086 LYZL1 (ENSBTAG00000010330) MAP3K8 (ENSBTAG00000011600) MTPAP (ENSBTAG00000004387) JCAD (ENSBTAG00000001204) SVIL (ENSBTAG00000027444) ZNF438 (ENSBTAG00000016294) ZEB1 (ENSBTAG00000020053) ##22 ARHGAP12 (ENSBTAG00000012677) ##27 KIF5B (ENSBTAG00000002280) EPC1 (ENSBTAG00000001552) NSUN6 (ENSBTAG00000022003) ENSBTAG00000055031 CACNB2 (ENSBTAG00000022000) SLC39A12 (ENSBTAG00000015525) MRC1 (ENSBTAG00000038048) TMEM236 (ENSBTAG00000053135) STAM (ENSBTAG00000002658) HACD1 (ENSBTAG00000033089) ST8SIA6 (ENSBTAG00000011366) VIM (ENSBTAG00000018463) TRDMT1 (ENSBTAG00000020546) CUBN (ENSBTAG00000005072) Hybrid Bos Indicus MODERN SPECIES 4 ODAD2 (ENSBIXG00005008849) ENSBIXG00005008827 MPP7 (ENSBIXG00005005276) WAC (ENSBIXG00005001631) BAMBI (ENSBIXG00005005229) ENSBIXG00005001753 ENSBIXG00005001784 MAP3K8 (ENSBIXG00005001797) MTPAP (ENSBIXG00005029152) JCAD (ENSBIXG00005029133) SVIL (ENSBIXG00005001956) ENSBIXG00005002318 ZNF438 (ENSBIXG00005028822) ENSBIXG00005028798 ENSBIXG00005028781 ZEB1 (ENSBIXG00005004971) ##22 ARHGAP12 (ENSBIXG00005028591) ##27 KIF5B (ENSBIXG00005028451) EPC1 (ENSBIXG00005028386) ENSBIXG00005028328 NSUN6 (ENSBIXG00005028312) CACNB2 (ENSBIXG00005005335) ENSBIXG00005026875 ENSBIXG00005004587 SLC39A12 (ENSBIXG00005026797) MRC1 (ENSBIXG00005026627) STAM (ENSBIXG00005004538) HACD1 (ENSBIXG00005004526) ST8SIA6 (ENSBIXG00005004520) VIM (ENSBIXG00005026430) TRDMT1 (ENSBIXG00005026377) Bos_a ANCESTRAL SPECIES ENSGT00950000183208.B ##22 Domestic yak MODERN SPECIES 3 RBBP9 (ENSBGRG00000005523) POLR3F (ENSBGRG00000005416) DZANK1 (ENSBGRG00000005266) ZNF133 (ENSBGRG00000005240) KAT14 (ENSBGRG00000005198) ENSBGRG00000005155 MGME1 (ENSBGRG00000005078) SNX5 (ENSBGRG00000005032) BANF2 (ENSBGRG00000005004) RRBP1 (ENSBGRG00000004547) DSTN (ENSBGRG00000004466) BFSP1 (ENSBGRG00000004415) ENSBGRG00000024878 ENSBGRG00000024792 ENSBGRG00000024783 ENSBGRG00000024132 ##22 ENSBGRG00000024108 KIF5B (ENSBGRG00000023175) ENSBGRG00000023140 ENSBGRG00000022775 VIM (ENSBGRG00000018970) ENSBGRG00000018950 ENSBGRG00000016342 ENSBGRG00000016312 ENSBGRG00000016221 ACBD7 (ENSBGRG00000015230) MEIG1 (ENSBGRG00000015055) ENSBGRG00000013757 ENSBGRG00000013679 PRPF18 (ENSBGRG00000012792) ENSBGRG00000012765 Atlantogenata ANCESTRAL SPECIES 5 ENSGT00550000074836 ENSGT00940000162459 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00390000009751 ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 ENSGT00940000155002.b Xenarthra ANCESTRAL SPECIES 1710 ENSGT00390000014526 ENSGT00950000183208.B ##22 Armadillo MODERN SPECIES 4189 ZNF438 (ENSDNOG00000000365) ZEB1 (ENSDNOG00000016748) ##22 Sloth MODERN SPECIES 3954 ZEB1 (ENSCHOG00000009874) ##22 Afrotheria ANCESTRAL SPECIES 11 ENSGT00550000074836 ENSGT00940000162459 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 Afrotheria_a ANCESTRAL SPECIES 11 ENSGT00550000074836 ENSGT00940000162459 ENSGT00940000158727 ENSGT00940000157325 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000159227 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 Hyrax MODERN SPECIES 3627 ZEB1 (ENSPCAG00000004425) ##22 Elephant MODERN SPECIES 108 ANKRD26 (ENSLAFG00000011946) PTCHD3 (ENSLAFG00000029781) RAB18 (ENSLAFG00000015582) ENSLAFG00000025535 MKX (ENSLAFG00000006126) ODAD2 (ENSLAFG00000016023) MPP7 (ENSLAFG00000010589) WAC (ENSLAFG00000006631) BAMBI (ENSLAFG00000029472) ENSLAFG00000014906 MAP3K8 (ENSLAFG00000013461) MTPAP (ENSLAFG00000013452) JCAD (ENSLAFG00000011422) SVIL (ENSLAFG00000012494) ZNF438 (ENSLAFG00000008654) ZEB1 (ENSLAFG00000009663) ##22 ARHGAP12 (ENSLAFG00000015897) ##27 KIF5B (ENSLAFG00000017365) ENSLAFG00000029631 ESYT2 (ENSLAFG00000001436) DYNC2I1 (ENSLAFG00000015440) VIPR2 (ENSLAFG00000003360) ENSLAFG00000029069 ZMYND11 (ENSLAFG00000014874) DIP2C (ENSLAFG00000014879) LARP4B (ENSLAFG00000015334) GTPBP4 (ENSLAFG00000018578) IDI2 (ENSLAFG00000006207) IDI1 (ENSLAFG00000003723) WDR37 (ENSLAFG00000008311) ADARB2 (ENSLAFG00000004361) Tenrec MODERN SPECIES 4336 ENSETEG00000011673 ##22 Anura ANCESTRAL SPECIES 11 ENSGT00550000074836 ENSGT00940000158727.hb ENSGT00940000164060 ENSGT00940000158727.ib ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b ENSGT00940000157169 ENSGT00950000183214.a.b.a.a ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00390000018381 ENSGT00940000155002.b ENSGT00940000157252 Frog MODERN SPECIES 6 rab18 (ENSXETG00000004556) mkx (ENSXETG00000049244) odad2 (ENSXETG00000004553) mpp7 (ENSXETG00000004546) ENSXETG00000040887 wac (ENSXETG00000004545) bambi (ENSXETG00000048957) map3k8 (ENSXETG00000002657) slc4a4 (ENSXETG00000002656) ENSXETG00000037762 jcad (ENSXETG00000002660) ENSXETG00000044251 svil (ENSXETG00000002662) znf438 (ENSXETG00000039044) ENSXETG00000044581 zeb1 (ENSXETG00000011655) ##22 arhgap12 (ENSXETG00000011657) ##27 ENSXETG00000038363 kif5b (ENSXETG00000011658) epc1 (ENSXETG00000011660) ENSXETG00000049009 itgb1 (ENSXETG00000026716) nrp1 (ENSXETG00000012629) ENSXETG00000046915 pard3 (ENSXETG00000006955) cul2 (ENSXETG00000008815) ccny (ENSXETG00000008813) gjd4 (ENSXETG00000026500) ENSXETG00000038957 fzd8 (ENSXETG00000041883) crem (ENSXETG00000048703) Leishan spiny toad MODERN SPECIES 8 MPP7 (ENSLLEG00000021316) ENSLLEG00000021922 WAC (ENSLLEG00000021968) BAMBI (ENSLLEG00000022543) ENSLLEG00000022627 ENSLLEG00000022646 ENSLLEG00000022664 ENSLLEG00000005695 ENSLLEG00000005718 ENSLLEG00000005778 ENSLLEG00000005809 ENSLLEG00000005841 SVIL (ENSLLEG00000005954) ZNF438 (ENSLLEG00000007087) ENSLLEG00000007099 ZEB1 (ENSLLEG00000007132) ##22 ENSLLEG00000007211 ENSLLEG00000007238 ENSLLEG00000007285 ##27 KIF5B (ENSLLEG00000007640) ENSLLEG00000007831 EPC1 (ENSLLEG00000007860) ITGB1 (ENSLLEG00000007966) NRP1 (ENSLLEG00000008592) ENSLLEG00000008835 PARD3 (ENSLLEG00000008920) ENSLLEG00000010396 CUL2 (ENSLLEG00000010431) ENSLLEG00000010675 ENSLLEG00000010761 CCNY (ENSLLEG00000010784) Coelacanth MODERN SPECIES 439 ENSLACG00000016843 SVIL (ENSLACG00000016451) ZNF438 (ENSLACG00000015998) ENSLACG00000013538 ZEB1 (ENSLACG00000013253) ##22 ENSLACG00000012325 ARHGAP12 (ENSLACG00000009927) ##27 KIF5B (ENSLACG00000008257) EPC1 (ENSLACG00000004189) Actinopterygii ANCESTRAL SPECIES 24 ENSGT00940000154926 ENSGT00950000183214.a.b.b ENSGT00940000157169 ENSGT01090000259987.a.b.d ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b.c Reedfish MODERN SPECIES 14 PTCHD3 (ENSECRG00000005908) PTCHD3 (ENSECRG00000005890) yme1l1b (ENSECRG00000005872) rab18a (ENSECRG00000005862) mkxa (ENSECRG00000005800) ODAD2 (ENSECRG00000005774) mpp7a (ENSECRG00000005745) waca (ENSECRG00000005706) bambia (ENSECRG00000005686) ENSECRG00000005680 ENSECRG00000005670 MTPAP (ENSECRG00000005659) ENSECRG00000005654 SVIL (ENSECRG00000005590) znf438 (ENSECRG00000005568) zeb1b (ENSECRG00000005503) ##22 arhgap12b (ENSECRG00000005414) ##27 KIF5B (ENSECRG00000005368) EPC1 (ENSECRG00000005301) ENSECRG00000005288 aoc1 (ENSECRG00000005274) ENSECRG00000005188 DHX30 (ENSECRG00000005133) ENSECRG00000005099 ENSECRG00000013173 ENSECRG00000012529 GPT (ENSECRG00000012302) ENSECRG00000012272 ENSECRG00000012259 PPP1R16A (ENSECRG00000012240) foxh1 (ENSECRG00000012220) Neopterygii ANCESTRAL SPECIES 32 ENSGT00390000014526 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154101.b ENSGT00440000037780.a ENSGT00940000156232.b ENSGT00940000156625 ENSGT00940000156227.f ENSGT00940000164184 ENSGT00940000166891 ENSGT00940000154653 ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b.c ENSGT01090000259987.a.b.d ENSGT00940000157169 ENSGT00950000183214.a.b.b ENSGT00940000154926 ENSGT00940000156952 ENSGT00940000154453.a.b.b ENSGT01090000260098.B ENSGT00940000161191.A ENSGT00940000158085 ENSGT00940000155002.b.e.b ENSGT00390000018381 Spotted gar MODERN SPECIES 675 YME1L1 (ENSLOCG00000007535) PTCHD3 (ENSLOCG00000007517) ENSLOCG00000007506 rab18a (ENSLOCG00000007491) mkxa (ENSLOCG00000007475) ODAD2 (ENSLOCG00000007443) mpp7a (ENSLOCG00000007418) waca (ENSLOCG00000007394) bambia (ENSLOCG00000007374) MAP3K8 (ENSLOCG00000007364) MTPAP (ENSLOCG00000007357) ENSLOCG00000007332 ENSLOCG00000007305 SVIL (ENSLOCG00000007278) znf438 (ENSLOCG00000007254) zeb1b (ENSLOCG00000007239) ##22 arhgap12b (ENSLOCG00000007199) ##27 KIF5B (ENSLOCG00000007172) EPC1 (ENSLOCG00000007160) ENSLOCG00000017819 ENSLOCG00000007143 dtx4a (ENSLOCG00000007126) ENSLOCG00000007110 ENSLOCG00000017818 ENSLOCG00000007090 ENSLOCG00000007079 si:dkey-9i23.5 (ENSLOCG00000007066) ENSLOCG00000007057 ENSLOCG00000007044 ZFP91 (ENSLOCG00000007033) ENSLOCG00000007012 Osteoglossocephalai ANCESTRAL SPECIES 106 ENSGT00940000156232.b ENSGT00940000156625 ENSGT00940000156227.f ENSGT00940000157325 ENSGT00940000158727.b.a.b ENSGT00550000074836.o ENSGT00940000156350.g ENSGT00940000154811.B.a.b ENSGT00940000156105.k.b ENSGT00960000186677 ENSGT01090000259987.a.b.d.b.b ENSGT00940000157169.c ENSGT00940000177290 ENSGT00940000154926 ENSGT00940000156952.a.a ENSGT00950000183208.B ##22 ENSGT00950000182860.a.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b.c ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000156952.a.b ENSGT00940000154453.a.b.b ENSGT01090000260098.B.a ENSGT00940000161191.A.a.b ENSGT00940000158085.b.b ENSGT00940000155002.b.e.b ENSGT00940000157252.m.a ENSGT00940000161191.A.a.a Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 227 ENSGT00390000014526.f ENSGT00950000183208.B.c ##22 ENSGT00950000182860.a.a.b.c ##27 ENSGT00940000155003.e.a.b.b ENSGT01090000259987.a.b.c ENSGT01090000259987.a.b.d.b.a.m ENSGT00940000157169.c ENSGT00950000183214.a.a.b ENSGT00940000154926 ENSGT00940000156952.a.a ENSGT00940000154453.a.b.b.c ENSGT01090000260098.B.a ENSGT00940000161191.A.b ENSGT00940000158085.b.a ENSGT00390000018381.d ENSGT00940000155002.b.e.a.a ENSGT00940000157252.n Asian bonytongue MODERN SPECIES 10 PTCHD3 (ENSSFOG00015017387) ENSSFOG00015017405 ODAD2 (ENSSFOG00015017505) SRSF1 (ENSSFOG00015030558) mpp7a (ENSSFOG00015017290) waca (ENSSFOG00015017207) bambia (ENSSFOG00015025612) MAP3K8 (ENSSFOG00015017144) MTPAP (ENSSFOG00015026078) ENSSFOG00015031515 MCMDC2 (ENSSFOG00015017040) ENSSFOG00015025546 ppp1r42 (ENSSFOG00015017009) cops5 (ENSSFOG00015016976) SVIL (ENSSFOG00015016888) ZEB1 (ENSSFOG00015016850) ##22 ARHGAP12 (ENSSFOG00015016810) ##27 ENSSFOG00015027777 KIF5B (ENSSFOG00015005922) EPC1 (ENSSFOG00015016625) ENSSFOG00015016230 ITGB1 (ENSSFOG00015016121) nrp1a (ENSSFOG00015015988) ENSSFOG00015026031 ENSSFOG00015015771 CUL2 (ENSSFOG00015015632) CREM (ENSSFOG00015026658) CCNY (ENSSFOG00015011386) fzd8a (ENSSFOG00015015542) klf6a (ENSSFOG00015032263) pitrm1 (ENSSFOG00015015433) P. kingsleyae MODERN SPECIES 354 ENSPKIG00000016597 ENSPKIG00000016617 SVIL (ENSPKIG00000016670) ZNF438 (ENSPKIG00000016726) ZEB1 (ENSPKIG00000016747) ##22 ARHGAP12 (ENSPKIG00000016870) ##27 KIF5B (ENSPKIG00000018136) EPC1 (ENSPKIG00000020527) ENSPKIG00000020598 ITGB1 (ENSPKIG00000020653) Osteoglossiformes ANCESTRAL SPECIES 129 ENSGT00940000164060.p ENSGT00940000164184.a ENSGT00940000156227.f.l ENSGT00940000156232.a ENSGT00440000037780.a.ab ENSGT00940000154101.b.c.a ENSGT00940000158806.j ENSGT00940000166891.b ENSGT00940000154653 ENSGT00390000014526.e ENSGT00950000183208.B.d ##22 ENSGT00950000182860.a.a.b.d ##27 ENSGT00940000154801 ENSGT00940000155003.e.a.b.a ENSGT00940000155003.e.a.a ENSGT01090000259987.a.b.d.b.a.n ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000156952.a.b ENSGT00940000154453.a.b.b.d ENSGT01090000260098.B.b ENSGT00940000161191.A.a.b ENSGT00940000158085.b.b ENSGT00390000018381.c ENSGT00940000155002.b.e.a.b ENSGT00940000157252.m.a Asian bonytongue MODERN SPECIES 22 ENSSFOG00015017973 APBB1IP (ENSSFOG00015006715) abi1b (ENSSFOG00015032042) ENSSFOG00015006647 yme1l1b (ENSSFOG00015006581) PTCHD3 (ENSSFOG00015006541) ENSSFOG00015006471 MKX (ENSSFOG00015006411) ENSSFOG00015006301 waca (ENSSFOG00015006277) bambib (ENSSFOG00015006268) MAP3K8 (ENSSFOG00015006234) ENSSFOG00015006218 ENSSFOG00015006153 znf438 (ENSSFOG00015006118) ZEB1 (ENSSFOG00015029761) ##22 ARHGAP12 (ENSSFOG00015006021) ##27 KIF5B (ENSSFOG00015031652) EPC1 (ENSSFOG00015005879) ITGB1 (ENSSFOG00015005810) NRP1 (ENSSFOG00015005440) pard3ab (ENSSFOG00015005353) CREM (ENSSFOG00015005318) CCNY (ENSSFOG00015005280) GJD4 (ENSSFOG00015029362) ENSSFOG00015024581 KLF6 (ENSSFOG00015031336) pitrm1 (ENSSFOG00015005122) PFKP (ENSSFOG00015005048) ADARB2 (ENSSFOG00015004693) wdr37 (ENSSFOG00015004577) P. kingsleyae MODERN SPECIES 76 ENSPKIG00000010441 MKX (ENSPKIG00000010466) waca (ENSPKIG00000010533) BAMBI (ENSPKIG00000010612) MAP3K8 (ENSPKIG00000010640) ENSPKIG00000010671 ENSPKIG00000010777 znf438 (ENSPKIG00000011019) ZEB1 (ENSPKIG00000011060) ##22 ARHGAP12 (ENSPKIG00000011122) ##27 KIF5B (ENSPKIG00000011213) ENSPKIG00000011282 ENSPKIG00000011304 ITGB1 (ENSPKIG00000011335) NRP1 (ENSPKIG00000011375) pard3ab (ENSPKIG00000011446) CREM (ENSPKIG00000011506) CCNY (ENSPKIG00000011570) GJD4 (ENSPKIG00000011615) FZD8 (ENSPKIG00000011630) ENSPKIG00000011644 KLF6 (ENSPKIG00000011675) pitrm1 (ENSPKIG00000011722) PFKP (ENSPKIG00000011873) Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES ENSGT00950000183208.B.e ##22 Otomorpha ANCESTRAL SPECIES ENSGT00950000183208.B.e ##22 Otophysi ANCESTRAL SPECIES ENSGT00950000183208.B.e ##22 Cyprinoidei ANCESTRAL SPECIES 177 ENSGT00940000155609.k ENSGT00940000160065 ENSGT00940000160235 ENSGT00950000183208.B.e ##22 ENSGT00940000168625 ENSGT00950000182860.a.b.a ##27 ENSGT00550000075017 ENSGT00390000006305 ENSGT00530000064137.a.a ENSGT00390000003427 ENSGT00940000154801.n.a ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000160694.g.a ENSGT01030000234597.a.b.b.f ENSGT00940000156407 Cyprininae ANCESTRAL SPECIES ENSGT00950000183208.B.e ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183208.B.e ##22 Golden-line barbel MODERN SPECIES 631 aurka (ENSSGRG00000010773) slc32a1 (ENSSGRG00000010775) ENSSGRG00000010776 PPP1R16B (ENSSGRG00000010778) ENSSGRG00000010832 shmt2 (ENSSGRG00000010836) R3HDM2 (ENSSGRG00000010841) INHBC (ENSSGRG00000010845) gli1 (ENSSGRG00000010847) ENSSGRG00000010849 ##22 ARHGAP9 (ENSSGRG00000010853) ##27 mars1 (ENSSGRG00000010865) ENSSGRG00000011069 dctn2 (ENSSGRG00000011098) ENSSGRG00000012222 ENSSGRG00000012308 igsf8 (ENSSGRG00000012309) ENSSGRG00000012310 ENSSGRG00000012312 arfrp1 (ENSSGRG00000012315) ENSSGRG00000012518 KCNQ2 (ENSSGRG00000012523) ENSSGRG00000012524 Characiphysae ANCESTRAL SPECIES ENSGT00950000183208.B.e ##22 Characiphysae_b ANCESTRAL SPECIES ENSGT00950000183208.B.e ##22 Characoidei ANCESTRAL SPECIES ENSGT00950000183208.B.e ##22 Red-bellied piranha MODERN SPECIES 108 NDUFA4L2 (ENSPNAG00000017712) shmt2 (ENSPNAG00000017698) NXPH4 (ENSPNAG00000017638) STAC3 (ENSPNAG00000017628) R3HDM2 (ENSPNAG00000017473) INHBC (ENSPNAG00000017399) gli1 (ENSPNAG00000017380) ENSPNAG00000017366 ##22 ARHGAP9 (ENSPNAG00000017348) ##27 mars1 (ENSPNAG00000017290) ddit3 (ENSPNAG00000017147) ENSPNAG00000017128 dctn2 (ENSPNAG00000017051) ENSPNAG00000016990 KIF5A (ENSPNAG00000016976) ENSPNAG00000016933 ENSPNAG00000016915 soat2 (ENSPNAG00000016902) igsf8 (ENSPNAG00000016880) sp7 (ENSPNAG00000016870) ENSPNAG00000016859 STMN3 (ENSPNAG00000016784) arfrp1 (ENSPNAG00000003438) Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 7 ENSGT00940000155224.c.a ENSGT00940000154360.A.a ENSGT00390000010265 ENSGT00940000159006.c.a ENSGT00940000154129.gd ENSGT00990000209831 ENSGT01060000252161 ENSGT00940000160885 ENSGT00940000167008 ENSGT00940000157804 ENSGT00940000160763 ENSGT00940000157748 ENSGT00940000161293 ENSGT00940000161314 ENSGT00950000183081.a.a.b ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b.c ENSGT01030000234815 ENSGT00940000159439.b ENSGT00390000003427 ENSGT00530000064137.a.a ENSGT00390000006305 ENSGT00550000075017 ENSGT00950000182860.a.b.a ##27 ENSGT00950000183208.A.d ##22 ENSGT00940000160235 ENSGT00940000160065 ENSGT00940000155609.k Euteleosteomorpha ANCESTRAL SPECIES 116 ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000158806 ENSGT00940000182537 ENSGT00940000158582 ENSGT00940000166891.a ENSGT00940000166891.b ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b ##27 ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT01090000259987.a.b.c ENSGT00940000157041.b ENSGT00940000157512.j ENSGT00940000154187.a.b.a ENSGT00940000154673.b ENSGT00940000154187.a.a ENSGT00940000154673.a.d.a ENSGT00940000169832 ENSGT00730000111052 ENSGT01030000234510.a.a.a.a.a.b ENSGT00940000158167 ENSGT00730000111317 Acanthomorphata ANCESTRAL SPECIES 148 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000182537 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b ##27 ENSGT00940000154801.o.b Euacanthomorphacea ANCESTRAL SPECIES 16 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000182537 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00440000038972 ENSGT00940000179373 ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT01060000248931 ENSGT00940000154805.b.g.e.a ENSGT00940000160959 ENSGT00940000167861 ENSGT00500000044922 Percomorphaceae ANCESTRAL SPECIES 53 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000182537 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b ##27 ENSGT01070000254828 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00440000038972 ENSGT00940000179373 ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb Percomorphaceae_B ANCESTRAL SPECIES 20 ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT01070000254828 ENSGT00950000182860.a.a.b.a.b.a.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00940000161826.B ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000172372 ENSGT00520000055637.B Ovalentaria ANCESTRAL SPECIES 21 ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00440000038972 ENSGT00940000156314.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT01030000235637 ENSGT00940000159742.sb ENSGT00940000161826.B ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000172372 Atherinomorphae ANCESTRAL SPECIES 19 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000177440 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT01030000235637 ENSGT00940000159742.sb ENSGT00940000161826.B ENSGT00940000161278 ENSGT00390000007109 ENSGT00940000172372 ENSGT00520000055637.B ENSGT00940000153769.B Cyprinodontiformes ANCESTRAL SPECIES 20 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000177440 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00940000161826.B ENSGT00940000161278 ENSGT00390000007109 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT00940000160556 ENSGT00940000164076.b.b Aplocheiloidei ANCESTRAL SPECIES 196 ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 Mangrove rivulus MODERN SPECIES 311 znf438 (ENSKMAG00000003845) zeb1b (ENSKMAG00000003798) ##22 ENSKMAG00000003780 ARHGAP12 (ENSKMAG00000003654) ##27 KIF5B (ENSKMAG00000003607) Turquoise killifish MODERN SPECIES 35 zeb1b (ENSNFUG00015018052) ##22 Cyprinodontoidei ANCESTRAL SPECIES 25 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000177440 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00940000161826.B ENSGT00940000161278 ENSGT00390000007109 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT00940000160556 ENSGT00940000164076.b.b Poeciliinae ANCESTRAL SPECIES 20 ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.b.a.a.b ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00940000161826.B ENSGT00940000161278 ENSGT00390000007109 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT00940000164076.b.b ENSGT01090000260052.b.b.b.j.b Poecilia ANCESTRAL SPECIES 90 ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.b.a.a.b ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000157790.tb ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00940000161826.B ENSGT00940000161278 ENSGT00390000007109 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT00940000164076.b.b NAME_6 ANCESTRAL SPECIES 406 ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.b.a.a.b.b ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a Amazon molly MODERN SPECIES 368 ENSPFOG00000013914 ENSPFOG00000020117 ENSPFOG00000013886 ENSPFOG00000023116 znf438 (ENSPFOG00000013874) zeb1b (ENSPFOG00000013823) ##22 ARHGAP12 (ENSPFOG00000013548) ##27 KIF5B (ENSPFOG00000013346) GFOD1 (ENSPFOG00000013326) ENSPFOG00000012883 ENSPFOG00000024540 ENSPFOG00000012861 ENSPFOG00000012854 ENSPFOG00000022298 aoc1 (ENSPFOG00000012813) ENSPFOG00000012114 ENSPFOG00000011976 ENSPFOG00000023443 ENSPFOG00000011950 ENSPFOG00000011904 ift74 (ENSPFOG00000011874) Sailfin molly MODERN SPECIES 132 ENSPLAG00000006181 ENSPLAG00000006232 znf438 (ENSPLAG00000006243) zeb1b (ENSPLAG00000006361) ##22 ENSPLAG00000006385 ARHGAP12 (ENSPLAG00000006461) ##27 KIF5B (ENSPLAG00000007324) GFOD1 (ENSPLAG00000007401) ENSPLAG00000007510 Guppy MODERN SPECIES 451 snx7 (ENSPREG00000013493) plppr5b (ENSPREG00000013463) ENSPREG00000013382 ENSPREG00000013346 RECK (ENSPREG00000013310) tgfbr1b (ENSPREG00000013266) lancl2 (ENSPREG00000013191) HECW1 (ENSPREG00000013037) MAP3K8 (ENSPREG00000012982) MTPAP (ENSPREG00000012951) ENSPREG00000012939 bambia (ENSPREG00000012867) waca (ENSPREG00000012820) mpp7a (ENSPREG00000012767) znf438 (ENSPREG00000012746) zeb1b (ENSPREG00000012707) ##22 ARHGAP12 (ENSPREG00000012557) ##27 KIF5B (ENSPREG00000012447) GFOD1 (ENSPREG00000012417) ENSPREG00000012121 aoc1 (ENSPREG00000012062) ENSPREG00000012046 ENSPREG00000012030 ENSPREG00000011991 KCNH2 (ENSPREG00000011948) ENSPREG00000011825 ift74 (ENSPREG00000011757) ENSPREG00000011715 ENSPREG00000011674 ENSPREG00000011665 ENSPREG00000011652 Platyfish MODERN SPECIES 13 ENSXMAG00000029456 mkxa (ENSXMAG00000023282) ENSXMAG00000024960 mpp7a (ENSXMAG00000021302) waca (ENSXMAG00000000741) bambia (ENSXMAG00000025513) ENSXMAG00000023738 ENSXMAG00000012502 MTPAP (ENSXMAG00000012503) MAP3K8 (ENSXMAG00000022332) ENSXMAG00000005488 ENSXMAG00000026728 ENSXMAG00000024859 ENSXMAG00000029650 znf438 (ENSXMAG00000005485) zeb1b (ENSXMAG00000005475) ##22 ARHGAP12 (ENSXMAG00000005472) ##27 KIF5B (ENSXMAG00000005410) GFOD1 (ENSXMAG00000028101) SLC12A7 (ENSXMAG00000005338) aoc1 (ENSXMAG00000005328) ENSXMAG00000005316 KCNH2 (ENSXMAG00000005304) ENSXMAG00000005303 ift74 (ENSXMAG00000005268) ENSXMAG00000025706 ENSXMAG00000026224 ENSXMAG00000013932 ENSXMAG00000022633 ENSXMAG00000027470 ENSXMAG00000024563 NAME_4 ANCESTRAL SPECIES 216 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00390000007109 ENSGT00520000055637.B ENSGT00940000153769.B Mummichog MODERN SPECIES 2284 ENSFHEG00000007465 ENSFHEG00000007506 MTPAP (ENSFHEG00000007523) MAP3K8 (ENSFHEG00000007591) ENSFHEG00000007631 ENSFHEG00000007678 znf438 (ENSFHEG00000007701) zeb1b (ENSFHEG00000007706) ##22 ARHGAP12 (ENSFHEG00000007915) ##27 KIF5B (ENSFHEG00000008398) GFOD1 (ENSFHEG00000008429) SLC12A7 (ENSFHEG00000008478) ENSFHEG00000008513 ENSFHEG00000008516 aoc1 (ENSFHEG00000000630) ENSFHEG00000008838 KCNH2 (ENSFHEG00000008936) ENSFHEG00000008948 ENSFHEG00000008959 ENSFHEG00000008969 ift74 (ENSFHEG00000008987) ENSFHEG00000009004 ENSFHEG00000009042 Sheepshead minnow MODERN SPECIES 232 mkxa (ENSCVAG00000013570) ODAD2 (ENSCVAG00000013513) mpp7a (ENSCVAG00000013461) ENSCVAG00000013389 waca (ENSCVAG00000013373) bambia (ENSCVAG00000013307) ENSCVAG00000013285 ENSCVAG00000013269 MTPAP (ENSCVAG00000013256) MAP3K8 (ENSCVAG00000013205) ENSCVAG00000013184 ENSCVAG00000013173 znf438 (ENSCVAG00000013163) zeb1b (ENSCVAG00000013156) ##22 ARHGAP12 (ENSCVAG00000013062) ##27 Oryzias ANCESTRAL SPECIES 18 ENSGT00950000183207.a ENSGT00440000038972 ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT01030000235637 ENSGT00940000159742.sb ENSGT00390000007109 ENSGT00940000172372 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT01090000260052.b.b.b.j ENSGT00940000160556 ENSGT00940000158294.g.a ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00940000158806 ENSGT00940000158582 ENSGT00940000166891.a ENSGT00940000154101.b.d ENSGT00440000037780.a ENSGT00940000156232.b.f ENSGT00940000156625 ENSGT00940000156227.f ENSGT00940000164184 ENSGT01090000259987.a.b.d.b.b ENSGT00940000157169.c Oryzias_b ANCESTRAL SPECIES 16 ENSGT00390000002579 ENSGT00950000183207.a ENSGT00440000038972 ENSGT00940000155829 ENSGT00940000179315 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00390000007109 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT01090000260052.b.b.b.j ENSGT00940000160556 ENSGT00940000158294.g.a ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00940000158806 ENSGT00940000158582 ENSGT00940000166891.a ENSGT00940000154101.b.d ENSGT00440000037780.a ENSGT00940000156232.b.f ENSGT00940000156625 ENSGT00940000156227.f ENSGT00940000164184 ENSGT01090000259987.a.b.d.b.b ENSGT00940000157169.c Javanese ricefish MODERN SPECIES 12 ENSOJAG00000022070 ENSOJAG00000022028 ENSOJAG00000022007 ENSOJAG00000021998 ift74 (ENSOJAG00000021964) ENSOJAG00000021944 ENSOJAG00000021931 ENSOJAG00000021928 vstm2a (ENSOJAG00000021918) ENSOJAG00000021915 ENSOJAG00000021903 HECW1 (ENSOJAG00000021532) ENSOJAG00000021456 svila (ENSOJAG00000020508) znf438 (ENSOJAG00000020443) zeb1b (ENSOJAG00000020431) ##22 ARHGAP12 (ENSOJAG00000020228) ##27 KIF5B (ENSOJAG00000019604) GFOD1 (ENSOJAG00000019583) ENSOJAG00000019580 waca (ENSOJAG00000019549) bambia (ENSOJAG00000019504) ENSOJAG00000019497 MTPAP (ENSOJAG00000019478) MAP3K8 (ENSOJAG00000019455) SLC12A7 (ENSOJAG00000017912) waca (ENSOJAG00000017804) mpp7a (ENSOJAG00000017541) ODAD2 (ENSOJAG00000017301) mkxa (ENSOJAG00000017251) rab18a (ENSOJAG00000017204) Indian medaka MODERN SPECIES 14 ENSOMEG00000001177 ENSOMEG00000001175 ENSOMEG00000001172 KCNH2 (ENSOMEG00000001168) ENSOMEG00000001155 ift74 (ENSOMEG00000001150) ENSOMEG00000001146 ENSOMEG00000001142 ENSOMEG00000001138 ENSOMEG00000022495 vstm2a (ENSOMEG00000022434) ENSOMEG00000022422 HECW1 (ENSOMEG00000022347) ENSOMEG00000022083 znf438 (ENSOMEG00000021688) zeb1b (ENSOMEG00000021646) ##22 ARHGAP12 (ENSOMEG00000021574) ##27 KIF5B (ENSOMEG00000021430) GFOD1 (ENSOMEG00000021357) MAP3K8 (ENSOMEG00000021342) MTPAP (ENSOMEG00000021317) ENSOMEG00000021297 bambia (ENSOMEG00000021276) SLC12A7 (ENSOMEG00000021232) waca (ENSOMEG00000020923) mpp7a (ENSOMEG00000020874) ODAD2 (ENSOMEG00000020718) mkxa (ENSOMEG00000020619) rab18a (ENSOMEG00000020605) itgb1a (ENSOMEG00000020566) nrp1a (ENSOMEG00000020413) Oryzias_a ANCESTRAL SPECIES 55 ENSGT00390000012668.g.a ENSGT00940000154539.a.a ENSGT00390000002579 ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT01030000235637 ENSGT00940000159742.sb ENSGT00390000007109 ENSGT00940000172372 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT00940000158294.g.a ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00940000158806 ENSGT00940000158582 ENSGT01070000256968 ENSGT00940000166891.a ENSGT00940000154101.b.d ENSGT00440000037780.a ENSGT00940000156232.b.f ENSGT00940000156625 ENSGT00940000156227.f ENSGT00940000164184 ENSGT01090000259987.a.b.d.b.b Japanese Medaka HdrR MODERN SPECIES 12 cnn3b (ENSORLG00000021940) alg14 (ENSORLG00000004026) ENSORLG00000004121 ENSORLG00000022532 ENSORLG00000004137 ENSORLG00000004140 ENSORLG00000023733 ift74 (ENSORLG00000004150) ENSORLG00000004152 vstm2a (ENSORLG00000019963) ENSORLG00000029686 ENSORLG00000028777 HECW1 (ENSORLG00000004224) ENSORLG00000004264 znf438 (ENSORLG00000004274) zeb1b (ENSORLG00000004296) ##22 ARHGAP12 (ENSORLG00000004314) ##27 KIF5B (ENSORLG00000004344) GFOD1 (ENSORLG00000004356) ENSORLG00000004461 MAP3K8 (ENSORLG00000004482) MTPAP (ENSORLG00000004485) ENSORLG00000022402 ENSORLG00000029619 bambia (ENSORLG00000004493) waca (ENSORLG00000004558) mpp7a (ENSORLG00000004576) ODAD2 (ENSORLG00000004608) mkxa (ENSORLG00000024272) rab18a (ENSORLG00000004624) itgb1a (ENSORLG00000004663) Chinese medaka MODERN SPECIES 894 znf438 (ENSOSIG00000020721) zeb1b (ENSOSIG00000020718) ##22 ARHGAP12 (ENSOSIG00000020713) ##27 KIF5B (ENSOSIG00000020503) GFOD1 (ENSOSIG00000020482) Ovalentaria_B ANCESTRAL SPECIES 20 ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT01100000263495.A.a.a ENSGT00940000159742.sb ENSGT00940000159846.a.b ENSGT00940000155829 ENSGT00950000183207.a Pomacentridae ANCESTRAL SPECIES 11 ENSGT00940000158806 ENSGT00940000158582 ENSGT00940000166891.a ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT01100000263495.A.a.a ENSGT00940000154101.b.d ENSGT00440000037780.a ENSGT00940000156232.b.f ENSGT00940000156625 ENSGT00940000156227.f ENSGT00940000164184 ENSGT01090000259987.a.b.d.b.b ENSGT00940000157169.c ENSGT00950000183214.a.a.a.b ENSGT00940000154926.f Pomacentridae_A ANCESTRAL SPECIES 8 ENSGT00940000159742.sb ENSGT00940000159846.a.b ENSGT00940000155829 ENSGT00950000183207.a ENSGT00940000158806 ENSGT00940000158582 ENSGT00940000166891.a ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00940000154101.b.d ENSGT00440000037780.a ENSGT00940000156232.b.f ENSGT00940000156625 ENSGT00940000156227.f ENSGT00940000164184 ENSGT01090000259987.a.b.d.b.b ENSGT00940000157169.c ENSGT00950000183214.a.a.a.b ENSGT00940000154926.f ENSGT00940000156952.a.a Amphiprion ANCESTRAL SPECIES 65 ENSGT00940000158806 ENSGT00940000158582 ENSGT00940000166891.a ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00940000155356.d.b.a.a.a.a.b.a.b ENSGT00940000168052.g ENSGT00940000154101.b.d ENSGT00440000037780.a ENSGT00940000156232.b.f ENSGT00940000156625 ENSGT00940000156227.f ENSGT00940000164184 ENSGT01090000259987.a.b.d.b.b ENSGT00940000157169.c ENSGT00950000183214.a.a.a.b Orange clownfish MODERN SPECIES 14 ENSAPEG00000002454 ENSAPEG00000002513 ENSAPEG00000002596 KCNH2 (ENSAPEG00000002622) ENSAPEG00000002696 ENSAPEG00000002732 aoc1 (ENSAPEG00000003096) ENSAPEG00000003102 MAP3K8 (ENSAPEG00000003120) MTPAP (ENSAPEG00000003171) ENSAPEG00000003188 ENSAPEG00000003211 ENSAPEG00000003288 ENSAPEG00000003414 znf438 (ENSAPEG00000003426) zeb1b (ENSAPEG00000003442) ##22 ARHGAP12 (ENSAPEG00000003492) ##27 KIF5B (ENSAPEG00000003717) GFOD1 (ENSAPEG00000004693) SLC12A7 (ENSAPEG00000004745) ENSAPEG00000004923 ENSAPEG00000004944 ENSAPEG00000004969 ENSAPEG00000004990 ENSAPEG00000005006 ENSAPEG00000005018 bambia (ENSAPEG00000005062) waca (ENSAPEG00000005091) mpp7a (ENSAPEG00000005136) ODAD2 (ENSAPEG00000005308) mkxa (ENSAPEG00000005366) Clown anemonefish MODERN SPECIES 3534 ENSAOCG00000014260 ENSAOCG00000014367 znf438 (ENSAOCG00000014404) zeb1b (ENSAOCG00000002587) ##22 ARHGAP12 (ENSAOCG00000014580) ##27 KIF5B (ENSAOCG00000015353) ENSAOCG00000015532 GFOD1 (ENSAOCG00000015543) SLC12A7 (ENSAOCG00000015773) ENSAOCG00000015852 ENSAOCG00000015878 ENSAOCG00000015894 ENSAOCG00000015920 bambia (ENSAOCG00000015942) waca (ENSAOCG00000015964) mpp7a (ENSAOCG00000016102) ODAD2 (ENSAOCG00000016163) mkxa (ENSAOCG00000016201) rab18a (ENSAOCG00000016233) Spiny chromis MODERN SPECIES 126 aoc1 (ENSAPOG00000006129) MAP3K8 (ENSAPOG00000006162) MTPAP (ENSAPOG00000000880) ENSAPOG00000006217 ENSAPOG00000006510 znf438 (ENSAPOG00000006557) zeb1b (ENSAPOG00000006605) ##22 ENSAPOG00000006620 ARHGAP12 (ENSAPOG00000006750) ##27 KIF5B (ENSAPOG00000006941) GFOD1 (ENSAPOG00000006958) SLC12A7 (ENSAPOG00000007115) Bicolor damselfish MODERN SPECIES 1957 znf438 (ENSSPAG00000015541) zeb1b (ENSSPAG00000015552) ##22 Cichlidae ANCESTRAL SPECIES 18 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156232.b.f.a ENSGT00940000156625 ENSGT00940000156232.b.f.b ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00940000159742.sb ENSGT00940000159846.a.b ENSGT00940000155829 ENSGT00950000183207.a Pseudocrenilabrinae ANCESTRAL SPECIES 20 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156232.b.f.a ENSGT00940000156625 ENSGT00940000156232.b.f.b ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d Pseudocrenilabrinae_A ANCESTRAL SPECIES 56 ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f.b ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d Haplochromini ANCESTRAL SPECIES 61 ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000178459 ENSGT00940000156232.b.f.a ENSGT00940000156625 ENSGT00940000156232.b.f.b ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d Burton s mouthbrooder MODERN SPECIES 293 ENSHBUG00000000798 nrp1a (ENSHBUG00000001549) itgb1a (ENSHBUG00000001530) rab18a (ENSHBUG00000001518) mkxa (ENSHBUG00000001513) ENSHBUG00000001510 ODAD2 (ENSHBUG00000001508) mpp7a (ENSHBUG00000001504) waca (ENSHBUG00000001498) bambia (ENSHBUG00000001496) ENSHBUG00000001490 MTPAP (ENSHBUG00000001481) MAP3K8 (ENSHBUG00000001474) ENSHBUG00000001467 znf438 (ENSHBUG00000001456) zeb1b (ENSHBUG00000001448) ##22 ARHGAP12 (ENSHBUG00000001443) ##27 KIF5B (ENSHBUG00000001422) GFOD1 (ENSHBUG00000001390) SLC12A7 (ENSHBUG00000001382) Haplochromini_A ANCESTRAL SPECIES 66 ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000178459 ENSGT00940000156232.b.f.a.c ENSGT00940000156625 ENSGT00940000156232.b.f.b ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00940000158431.a.a.a.a.a.a.c.b.f.b.e.a P. nyererei MODERN SPECIES 396 nrp1a (ENSPNYG00000006931) itgb1a (ENSPNYG00000006993) rab18a (ENSPNYG00000007064) mkxa (ENSPNYG00000007091) ENSPNYG00000007110 ENSPNYG00000007121 ODAD2 (ENSPNYG00000007135) mpp7a (ENSPNYG00000007195) waca (ENSPNYG00000007280) bambia (ENSPNYG00000007312) ENSPNYG00000007352 MTPAP (ENSPNYG00000007396) MAP3K8 (ENSPNYG00000007426) ENSPNYG00000007465 znf438 (ENSPNYG00000007547) zeb1b (ENSPNYG00000007561) ##22 ARHGAP12 (ENSPNYG00000007591) ##27 KIF5B (ENSPNYG00000007737) GFOD1 (ENSPNYG00000008278) SLC12A7 (ENSPNYG00000008311) ENSPNYG00000008371 Haplochromini_B ANCESTRAL SPECIES 81 ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000178459 ENSGT00940000156232.b.f.a.c ENSGT00940000156625 ENSGT00940000156232.b.f.b ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00940000158431.a.a.a.a.a.a.c.b.f.b.e.a Zebra mbuna MODERN SPECIES 1112 EPB41L3 (ENSMZEG00005015754) lama1 (ENSMZEG00005015854) CUBN (ENSMZEG00005016230) trdmt1 (ENSMZEG00005016311) RSU1 (ENSMZEG00005016326) C1QL3 (ENSMZEG00005016340) ENSMZEG00005016344 ENSMZEG00005016353 waca (ENSMZEG00005016365) bambia (ENSMZEG00005016371) ENSMZEG00005016403 MTPAP (ENSMZEG00005016416) MAP3K8 (ENSMZEG00005016425) ENSMZEG00005016456 znf438 (ENSMZEG00005016471) zeb1b (ENSMZEG00005016493) ##22 ARHGAP12 (ENSMZEG00005016532) ##27 KIF5B (ENSMZEG00005016590) GFOD1 (ENSMZEG00005016863) SLC12A7 (ENSMZEG00005016880) si:ch211-196f5.2 (ENSMZEG00005016911) ENSMZEG00005016916 snx16 (ENSMZEG00005016925) ENSMZEG00005016939 WWP1 (ENSMZEG00005016946) rmdn1 (ENSMZEG00005016961) cpne3 (ENSMZEG00005016990) cpne3 (ENSMZEG00005017000) cpne3 (ENSMZEG00005017027) idi1 (ENSMZEG00005017046) wdr37 (ENSMZEG00005017050) Eastern happy MODERN SPECIES 21 ENSACLG00000011461 ENSACLG00000011148 ENSACLG00000011139 ENSACLG00000011129 ENSACLG00000011120 ODAD2 (ENSACLG00000011033) mpp7a (ENSACLG00000010532) waca (ENSACLG00000010467) bambia (ENSACLG00000010433) ENSACLG00000009971 ENSACLG00000009955 MTPAP (ENSACLG00000009947) MAP3K8 (ENSACLG00000009926) ENSACLG00000009888 znf438 (ENSACLG00000009882) zeb1b (ENSACLG00000009867) ##22 ARHGAP12 (ENSACLG00000009770) ##27 KIF5B (ENSACLG00000009432) GFOD1 (ENSACLG00000009421) SLC12A7 (ENSACLG00000009248) ENSACLG00000008889 ENSACLG00000008573 ENSACLG00000007996 C1QL3 (ENSACLG00000007983) RSU1 (ENSACLG00000007951) trdmt1 (ENSACLG00000007922) CUBN (ENSACLG00000007540) lama1 (ENSACLG00000007435) EPB41L3 (ENSACLG00000007329) TMEM200C (ENSACLG00000007313) L3MBTL4 (ENSACLG00000007292) Lyretail cichlid MODERN SPECIES 414 nrp1a (ENSNBRG00000013712) itgb1a (ENSNBRG00000013537) rab18a (ENSNBRG00000013507) mkxa (ENSNBRG00000013488) ODAD2 (ENSNBRG00000013452) mpp7a (ENSNBRG00000013432) waca (ENSNBRG00000013422) bambia (ENSNBRG00000013411) ENSNBRG00000013404 ENSNBRG00000013378 MTPAP (ENSNBRG00000013373) MAP3K8 (ENSNBRG00000013360) ENSNBRG00000013314 znf438 (ENSNBRG00000013305) zeb1b (ENSNBRG00000013281) ##22 ARHGAP12 (ENSNBRG00000013228) ##27 KIF5B (ENSNBRG00000012740) GFOD1 (ENSNBRG00000012704) Nile tilapia MODERN SPECIES 21 nrp1a (ENSONIG00000003681) itgb1a (ENSONIG00000003702) rab18a (ENSONIG00000003725) mkxa (ENSONIG00000003727) mpp7a (ENSONIG00000003735) ODAD2 (ENSONIG00000003729) ENSONIG00000034238 waca (ENSONIG00000003741) bambia (ENSONIG00000003743) ENSONIG00000032435 ENSONIG00000028545 MTPAP (ENSONIG00000003744) map3k8 (ENSONIG00000003745) ENSONIG00000003748 znf438 (ENSONIG00000003765) zeb1b (ENSONIG00000003766) ##22 ARHGAP12 (ENSONIG00000003769) ##27 ENSONIG00000039701 KIF5B (ENSONIG00000003778) ENSONIG00000011981 GFOD1 (ENSONIG00000003783) ENSONIG00000040861 SLC12A7 (ENSONIG00000003786) ENSONIG00000038333 ENSONIG00000040180 ENSONIG00000040862 ENSONIG00000040946 HECW1 (ENSONIG00000015132) ENSONIG00000032486 stk17a (ENSONIG00000015129) vopp1 (ENSONIG00000015127) Midas cichlid MODERN SPECIES 717 ENSACIG00000014574 MTPAP (ENSACIG00000014589) MAP3K8 (ENSACIG00000014626) ENSACIG00000014641 znf438 (ENSACIG00000014706) zeb1b (ENSACIG00000014765) ##22 ENSACIG00000014865 ARHGAP12 (ENSACIG00000014879) ##27 KIF5B (ENSACIG00000014998) ENSACIG00000015541 ENSACIG00000015551 SLC12A7 (ENSACIG00000015559) ENSACIG00000015625 ENSACIG00000015657 KCNH2 (ENSACIG00000015674) ENSACIG00000015742 aoc1 (ENSACIG00000015950) Percomorphaceae_C ANCESTRAL SPECIES 21 ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT01070000254828 ENSGT00950000182860.a.a.b.a.b.a.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00940000161826.B ENSGT00390000007109 ENSGT00940000172372 ENSGT00520000055637.B ENSGT00940000153769.B Percomorphaceae_D ANCESTRAL SPECIES 21 ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT01070000254828 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00390000007109 ENSGT00940000161826.B ENSGT00520000055637.B ENSGT00940000153769.B ENSGT01090000260052.b.b.b.i ENSGT00940000160556 Anabantaria ANCESTRAL SPECIES 25 ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT01070000254828 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00940000172372 ENSGT00390000007109 ENSGT00940000161826.B ENSGT00520000055637.B ENSGT00940000153769.B ENSGT01090000260052.b.b.b.i Zig-zag eel MODERN SPECIES 12 CUL2 (ENSMAMG00000014673) ENSMAMG00000014597 ENSMAMG00000014560 nrp1a (ENSMAMG00000014435) itgb1a (ENSMAMG00000014352) rab18a (ENSMAMG00000027332) mkxa (ENSMAMG00000014295) ODAD2 (ENSMAMG00000014237) mpp7a (ENSMAMG00000014111) waca (ENSMAMG00000014054) bambia (ENSMAMG00000014034) ENSMAMG00000014010 MTPAP (ENSMAMG00000013994) MAP3K8 (ENSMAMG00000013963) ZNF438 (ENSMAMG00000013952) ZEB1 (ENSMAMG00000013924) ##22 KIF5B (ENSMAMG00000013863) ENSMAMG00000021534 ENSMAMG00000013834 ENSMAMG00000024683 ENSMAMG00000026003 ENSMAMG00000028374 ENSMAMG00000028741 ENSMAMG00000027552 ENSMAMG00000025807 ENSMAMG00000013573 ENSMAMG00000013561 ENSMAMG00000013430 ENSMAMG00000013598 ENSMAMG00000013761 ENSMAMG00000028561 Anabantoidei ANCESTRAL SPECIES 20 ENSGT00940000175356 ENSGT00940000157704.a.b ENSGT00390000010285.d ENSGT00940000160622.ab ENSGT00390000001029 ENSGT00940000159246 ENSGT00940000160233 ENSGT00390000008042.A.a.a ENSGT00390000002579 ENSGT00940000154539.a.a ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT01070000254828 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00390000007109 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT01090000260052.b.b.b.i ENSGT00940000160556 ENSGT00940000158294.g.a ENSGT00940000166463 Climbing perch MODERN SPECIES 11 ENSATEG00000018365 ENSATEG00000018397 ENSATEG00000018421 ENSATEG00000018453 CHCHD7 (ENSATEG00000018464) ENSATEG00000018479 MOS (ENSATEG00000018554) ENSATEG00000018485 ENSATEG00000018560 ENSATEG00000018591 ENSATEG00000018618 MTPAP (ENSATEG00000018649) MAP3K8 (ENSATEG00000018658) ENSATEG00000018685 ZNF438 (ENSATEG00000018773) ZEB1 (ENSATEG00000018791) ##22 ARHGAP12 (ENSATEG00000018830) ##27 KIF5B (ENSATEG00000018926) ENSATEG00000019454 ENSATEG00000019481 aoc1 (ENSATEG00000019580) ENSATEG00000026413 ENSATEG00000028905 ENSATEG00000027516 ENSATEG00000029360 ENSATEG00000019922 ENSATEG00000020113 ENSATEG00000009153 ENSATEG00000027598 ENSATEG00000020175 ENSATEG00000029695 Siamese fighting fish MODERN SPECIES 15 plag1 (ENSBSLG00000000544) mos (ENSBSLG00000000534) STEAP2 (ENSBSLG00000000519) alg14 (ENSBSLG00000000510) cnn3b (ENSBSLG00000000481) ENSBSLG00000026296 MTPAP (ENSBSLG00000026293) MAP3K8 (ENSBSLG00000026289) rab18a (ENSBSLG00000026286) mkxa (ENSBSLG00000026274) ODAD2 (ENSBSLG00000026255) mpp7a (ENSBSLG00000026246) waca (ENSBSLG00000026223) ENSBSLG00000026135 znf438 (ENSBSLG00000026095) zeb1b (ENSBSLG00000026092) ##22 ARHGAP12 (ENSBSLG00000026023) ##27 ENSBSLG00000025822 KIF5B (ENSBSLG00000025606) GFOD1 (ENSBSLG00000025562) ENSBSLG00000025460 aoc1 (ENSBSLG00000025102) KCNH2 (ENSBSLG00000024782) ENSBSLG00000024724 ENSBSLG00000024670 ENSBSLG00000024668 ENSBSLG00000024610 ENSBSLG00000024587 ENSBSLG00000024574 ENSBSLG00000024562 ENSBSLG00000024525 Carangaria ANCESTRAL SPECIES 21 ENSGT00940000156952.a.a ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00390000007109 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT01090000260052.b.b.b.i ENSGT00940000160556 ENSGT00940000158294.g.a ENSGT00940000154014.a Carangaria_A ANCESTRAL SPECIES 15 ENSGT00940000156952.a.a ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000158806 ENSGT00940000158582 ENSGT00940000166891.a ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000179373 ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00390000007109 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT01090000260052.b.b.b.i ENSGT00940000160556 ENSGT00940000158294.g.a Seriola ANCESTRAL SPECIES 49 ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000158806 ENSGT00940000158582 ENSGT00940000166891.a ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000179373 ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00940000161095 ENSGT00390000007109 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT01090000260052.b.b.b.i ENSGT00940000179701 Greater amberjack MODERN SPECIES 81 ENSSDUG00000004039 ENSSDUG00000004031 nrp1a (ENSSDUG00000003937) itgb1a (ENSSDUG00000003862) rab18a (ENSSDUG00000003823) mkxa (ENSSDUG00000003786) ODAD2 (ENSSDUG00000003701) mpp7a (ENSSDUG00000003631) waca (ENSSDUG00000003584) bambia (ENSSDUG00000003562) MAP3K8 (ENSSDUG00000003530) MTPAP (ENSSDUG00000003515) ENSSDUG00000003458 ENSSDUG00000003320 znf438 (ENSSDUG00000003284) zeb1b (ENSSDUG00000003273) ##22 ARHGAP12 (ENSSDUG00000003214) ##27 KIF5B (ENSSDUG00000003179) GFOD1 (ENSSDUG00000003157) ENSSDUG00000003010 aoc1 (ENSSDUG00000002978) ENSSDUG00000002960 ENSSDUG00000002740 KCNH2 (ENSSDUG00000002567) ENSSDUG00000002458 ift74 (ENSSDUG00000002408) ENSSDUG00000002388 ENSSDUG00000002318 ENSSDUG00000002305 ENSSDUG00000002288 ENSSDUG00000002279 Yellowtail amberjack MODERN SPECIES 2804 znf438 (ENSSLDG00000016970) zeb1b (ENSSLDG00000016836) ##22 ARHGAP12 (ENSSLDG00000016712) ##27 KIF5B (ENSSLDG00000016633) GFOD1 (ENSSLDG00000016606) ENSSLDG00000016444 aoc1 (ENSSLDG00000016401) ENSSLDG00000016385 ENSSLDG00000016227 ENSSLDG00000016164 KCNH2 (ENSSLDG00000016095) ENSSLDG00000016046 Barramundi perch MODERN SPECIES 46 ENSLCAG00010003330 znf438 (ENSLCAG00010003175) zeb1b (ENSLCAG00010003170) ##22 ARHGAP12 (ENSLCAG00010002869) ##27 KIF5B (ENSLCAG00010002709) GFOD1 (ENSLCAG00010002674) SLC12A7 (ENSLCAG00010001650) aoc1 (ENSLCAG00010001494) KCNH2 (ENSLCAG00010001447) ENSLCAG00010001430 ENSLCAG00010001416 ift74 (ENSLCAG00010001405) ENSLCAG00010001393 ENSLCAG00010001391 ENSLCAG00010001381 ENSLCAG00010001375 ENSLCAG00010001369 ENSLCAG00010001364 Pleuronectoidei ANCESTRAL SPECIES 12 ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb Tongue sole MODERN SPECIES 13 crhb (ENSCSEG00000014761) rrs1 (ENSCSEG00000014750) ENSCSEG00000014746 MYBL1 (ENSCSEG00000014717) sgk3 (ENSCSEG00000014665) TCF24 (ENSCSEG00000014644) MCMDC2 (ENSCSEG00000014624) ppp1r42 (ENSCSEG00000014610) cops5 (ENSCSEG00000014592) ARFGEF1 (ENSCSEG00000014422) CPA6 (ENSCSEG00000014390) PREX2 (ENSCSEG00000014354) zgc:162928 (ENSCSEG00000014341) sulf1 (ENSCSEG00000014221) znf438 (ENSCSEG00000014196) zeb1b (ENSCSEG00000014189) ##22 ARHGAP12 (ENSCSEG00000014140) ##27 KIF5B (ENSCSEG00000014089) GFOD1 (ENSCSEG00000014067) SLC12A7 (ENSCSEG00000013972) c6ast1 (ENSCSEG00000013952) ENSCSEG00000013926 BAMBI (ENSCSEG00000013917) BAMBI (ENSCSEG00000013911) waca (ENSCSEG00000013898) mpp7a (ENSCSEG00000013742) ODAD2 (ENSCSEG00000013698) mkxa (ENSCSEG00000013683) xkr9 (ENSCSEG00000013678) tram1 (ENSCSEG00000013656) ncoa2 (ENSCSEG00000013605) Turbot MODERN SPECIES 13 CUL2 (ENSSMAG00000002533) ENSSMAG00000002652 nrp1a (ENSSMAG00000002795) itgb1a (ENSSMAG00000002905) rab18a (ENSSMAG00000002969) mkxa (ENSSMAG00000003003) ODAD2 (ENSSMAG00000003033) mpp7a (ENSSMAG00000003071) waca (ENSSMAG00000003132) bambia (ENSSMAG00000003169) ENSSMAG00000003196 MTPAP (ENSSMAG00000003235) MAP3K8 (ENSSMAG00000003241) ENSSMAG00000003291 ZNF438 (ENSSMAG00000003357) ZEB1 (ENSSMAG00000003369) ##22 ARHGAP12 (ENSSMAG00000003399) ##27 KIF5B (ENSSMAG00000003556) ENSSMAG00000034668 ENSSMAG00000003597 aoc1 (ENSSMAG00000003696) ENSSMAG00000003702 ENSSMAG00000003876 ENSSMAG00000025543 ENSSMAG00000004013 ENSSMAG00000025886 ENSSMAG00000004062 ENSSMAG00000004119 ENSSMAG00000004132 ENSSMAG00000030262 vstm2a (ENSSMAG00000032188) Eupercaria ANCESTRAL SPECIES 20 ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00940000161826.B ENSGT00390000007109 ENSGT00940000172372 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT01090000260052.b.b.b.i ENSGT00940000160556 Tetraodontidae ANCESTRAL SPECIES 186 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000159846.a.b Tetraodon MODERN SPECIES 26 rgs9bp (ENSTNIG00000008754) zgc:165532 (ENSTNIG00000008755) dph2 (ENSTNIG00000008756) ncf2 (ENSTNIG00000008757) garem (ENSTNIG00000008758) SLC22A17 (ENSTNIG00000008759) ENSTNIG00000008760 ENSTNIG00000000016 NSMAF (ENSTNIG00000008761) ENSTNIG00000008762 ENSTNIG00000008763 ENSTNIG00000008764 pomp (ENSTNIG00000008765) ENSTNIG00000008766 znf438 (ENSTNIG00000008767) zeb1b (ENSTNIG00000008768) ##22 ARHGAP12 (ENSTNIG00000008769) ##27 KIF5B (ENSTNIG00000008770) GFOD1 (ENSTNIG00000008771) ENSTNIG00000008772 hist2h3c (ENSTNIG00000008773) ENSTNIG00000008774 si:dkey-23a13.17 (ENSTNIG00000008775) ENSTNIG00000001078 ENSTNIG00000008776 ENSTNIG00000008777 SLC12A7 (ENSTNIG00000008778) ENSTNIG00000008779 aoc1 (ENSTNIG00000008780) ENSTNIG00000000071 ENSTNIG00000008781 Fugu MODERN SPECIES 1 ENSTRUG00000031360 xylb (ENSTRUG00000017480) ENSTRUG00000017476 crygn2 (ENSTRUG00000017468) sugct (ENSTRUG00000026013) inhbaa (ENSTRUG00000031646) eci2 (ENSTRUG00000017460) ENSTRUG00000017446 tmeff1b (ENSTRUG00000017441) cavin4b (ENSTRUG00000025569) PRKDC (ENSTRUG00000017418) ENSTRUG00000017408 ENSTRUG00000031251 ENSTRUG00000029036 znf438 (ENSTRUG00000033039) zeb1b (ENSTRUG00000001422) ##22 ENSTRUG00000031148 ARHGAP12 (ENSTRUG00000022088) ##27 GFOD1 (ENSTRUG00000027900) SLC12A7 (ENSTRUG00000031720) ENSTRUG00000026089 aoc1 (ENSTRUG00000017882) KCNH2 (ENSTRUG00000029710) ENSTRUG00000027346 ENSTRUG00000021270 ENSTRUG00000030838 ENSTRUG00000026507 Eupecaria_A ANCESTRAL SPECIES 19 ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00940000161826.B ENSGT00390000007109 ENSGT00940000172372 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT01090000260052.b.b.b.i ENSGT00940000160556 Ballan wrasse MODERN SPECIES 117 ENSLBEG00000027168 PDE1C (ENSLBEG00000027129) ENSLBEG00000027105 ENSLBEG00000027101 C1QL3 (ENSLBEG00000027098) RSU1 (ENSLBEG00000027083) trdmt1 (ENSLBEG00000027059) ENSLBEG00000027042 ENSLBEG00000027025 ENSLBEG00000027009 ENSLBEG00000026988 MTPAP (ENSLBEG00000026965) MAP3K8 (ENSLBEG00000026950) ENSLBEG00000026879 znf438 (ENSLBEG00000026853) zeb1b (ENSLBEG00000026840) ##22 ARHGAP12 (ENSLBEG00000026764) ##27 KIF5B (ENSLBEG00000026709) GFOD1 (ENSLBEG00000026689) SLC12A7 (ENSLBEG00000026022) ENSLBEG00000025736 abcd3a (ENSLBEG00000025647) f3a (ENSLBEG00000025608) cnn3b (ENSLBEG00000025584) alg14 (ENSLBEG00000025563) STEAP2 (ENSLBEG00000025542) mos (ENSLBEG00000025528) plag1 (ENSLBEG00000025522) chchd7 (ENSLBEG00000025502) ENSLBEG00000025446 CIBAR2 (ENSLBEG00000025268) Eupecaria_B ANCESTRAL SPECIES 19 ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00940000161826.B ENSGT00390000007109 ENSGT00940000172372 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT01090000260052.b.b.b.i ENSGT00940000160556 Perciformes ANCESTRAL SPECIES 21 ENSGT00940000158200 ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT01030000236099 ENSGT00940000157790 ENSGT00940000159742.sb ENSGT00390000007109 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT01090000260052.b.b.b.i ENSGT00940000160556 Cottioidei ANCESTRAL SPECIES 94 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000157790 ENSGT00940000159742.sb Stickleback MODERN SPECIES 361 ptbp2a (ENSGACG00000000940) hccsb (ENSGACG00000000951) ENSGACG00000000964 RECK (ENSGACG00000000965) ENSGACG00000000967 tgfbr1b (ENSGACG00000000970) lancl2 (ENSGACG00000000972) VOPP1 (ENSGACG00000000975) ift74 (ENSGACG00000000976) ENSGACG00000000979 ENSGACG00000000981 ENSGACG00000000983 ENSGACG00000000984 ENSGACG00000000987 znf438 (ENSGACG00000000999) zeb1b (ENSGACG00000001002) ##22 ARHGAP12 (ENSGACG00000001006) ##27 KIF5B (ENSGACG00000001018) GFOD1 (ENSGACG00000001021) ENSGACG00000001024 aoc1 (ENSGACG00000001050) ENSGACG00000001055 KCNH2 (ENSGACG00000001069) Lumpfish MODERN SPECIES 12 ENSCLMG00005001774 nrp1a (ENSCLMG00005002423) itgb1a (ENSCLMG00005002469) rab18a (ENSCLMG00005007234) mkxa (ENSCLMG00005007249) ENSCLMG00005007253 mpp7a (ENSCLMG00005007262) waca (ENSCLMG00005007354) bambia (ENSCLMG00005007361) ENSCLMG00005007363 ENSCLMG00005007364 ENSCLMG00005007365 ENSCLMG00005007367 ENSCLMG00005007376 znf438 (ENSCLMG00005007682) zeb1b (ENSCLMG00005007683) ##22 ARHGAP12 (ENSCLMG00005007687) ##27 KIF5B (ENSCLMG00005007714) GFOD1 (ENSCLMG00005007719) ENSCLMG00005007721 ENSCLMG00005007723 ENSCLMG00005007725 aoc1 (ENSCLMG00005007727) ENSCLMG00005007850 ift74 (ENSCLMG00005018840) ENSCLMG00005018842 ENSCLMG00005018844 lancl2 (ENSCLMG00005018849) tgfbr1b (ENSCLMG00005018860) ENSCLMG00005018921 RECK (ENSCLMG00005018924) Perciformes_a ANCESTRAL SPECIES 64 ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT01030000236099 ENSGT00940000157790 ENSGT00940000159742.sb ENSGT00390000007109 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT01090000260052.b.b.b.i ENSGT00940000160556 Channel bull blenny MODERN SPECIES 12 nrp1a (ENSCGOG00000019992) itgb1a (ENSCGOG00000020904) rab18a (ENSCGOG00000022425) mkxa (ENSCGOG00000022478) ODAD2 (ENSCGOG00000022486) ENSCGOG00000022521 mpp7a (ENSCGOG00000022531) waca (ENSCGOG00000022719) bambia (ENSCGOG00000022780) MAP3K8 (ENSCGOG00000022786) MTPAP (ENSCGOG00000022792) zgc:113274 (ENSCGOG00000022798) ENSCGOG00000022802 ENSCGOG00000022810 znf438 (ENSCGOG00000022811) zeb1b (ENSCGOG00000022814) ##22 ARHGAP12 (ENSCGOG00000022854) ##27 KIF5B (ENSCGOG00000023248) GFOD1 (ENSCGOG00000023260) SLC12A7 (ENSCGOG00000023389) ENSCGOG00000024182 aoc1 (ENSCGOG00000024183) ENSCGOG00000024188 ENSCGOG00000024194 ENSCGOG00000024196 ENSCGOG00000024204 ift74 (ENSCGOG00000024229) ENSCGOG00000024273 ENSCGOG00000024275 ENSCGOG00000024278 ENSCGOG00000024279 Pike perch MODERN SPECIES 146 MTPAP (ENSSLUG00000009772) MAP3K8 (ENSSLUG00000009783) ENSSLUG00000009792 ENSSLUG00000009803 ENSSLUG00000009883 ENSSLUG00000010020 ENSSLUG00000010033 znf438 (ENSSLUG00000010054) zeb1b (ENSSLUG00000010067) ##22 ARHGAP12 (ENSSLUG00000010097) ##27 KIF5B (ENSSLUG00000010201) GFOD1 (ENSSLUG00000010275) ENSSLUG00000010286 SLC12A7 (ENSSLUG00000010317) aoc1 (ENSSLUG00000010394) ENSSLUG00000010423 KCNH2 (ENSSLUG00000010642) ENSSLUG00000010658 ENSSLUG00000010671 Eupecaria_C ANCESTRAL SPECIES 19 ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00940000161826.B ENSGT00390000007109 ENSGT00940000172372 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT01090000260052.b.b.b.i ENSGT00940000160556 Eupercaria_incertae_sedis ANCESTRAL SPECIES 17 ENSGT00940000154926 ENSGT00950000183214.a.a.a.b ENSGT00940000157169.c ENSGT01090000259987.a.b.d.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b.f ENSGT00440000037780.a ENSGT00940000154101.b.d ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.b.b ##27 ENSGT00940000154801.o.b ENSGT00940000160837 ENSGT00940000157657.d ENSGT00950000183207.a ENSGT00940000155829 ENSGT00940000159846.a.b ENSGT00940000159742.sb ENSGT00940000161826.B ENSGT00940000172372 ENSGT00390000007109 ENSGT00520000055637.B ENSGT00940000153769.B ENSGT01090000260052.b.b.b.i ENSGT00940000160556 European seabass MODERN SPECIES 8 ENSDLAG00005027399 ENSDLAG00005004207 nrp1a (ENSDLAG00005001072) itgb1a (ENSDLAG00005000845) rab18a (ENSDLAG00005031437) mkxa (ENSDLAG00005000793) ODAD2 (ENSDLAG00005000776) mpp7a (ENSDLAG00005000682) waca (ENSDLAG00005000616) BAMBI (ENSDLAG00005032379) ENSDLAG00005000592 MTPAP (ENSDLAG00005000587) MAP3K8 (ENSDLAG00005031355) ENSDLAG00005015584 ZNF438 (ENSDLAG00005016082) ZEB1 (ENSDLAG00005016131) ##22 ARHGAP12 (ENSDLAG00005016174) ##27 KIF5B (ENSDLAG00005016721) ENSDLAG00005017503 ENSDLAG00005017517 ENSDLAG00005029356 ENSDLAG00005030609 ENSDLAG00005031070 aoc1 (ENSDLAG00005017792) ENSDLAG00005017802 ENSDLAG00005018314 ENSDLAG00005030481 ENSDLAG00005019011 ENSDLAG00005028951 ENSDLAG00005002845 ENSDLAG00005003079 Large yellow croaker MODERN SPECIES 494 rab18a (ENSLCRG00005023926) mkxa (ENSLCRG00005023930) ODAD2 (ENSLCRG00005001428) ENSLCRG00005001485 mpp7a (ENSLCRG00005001636) waca (ENSLCRG00005003948) bambia (ENSLCRG00005004036) ENSLCRG00005004037 ENSLCRG00005004038 ENSLCRG00005004039 MAP3K8 (ENSLCRG00005004040) MTPAP (ENSLCRG00005004042) ENSLCRG00005004044 ENSLCRG00005004052 znf438 (ENSLCRG00005006371) zeb1b (ENSLCRG00005006377) ##22 ARHGAP12 (ENSLCRG00005006388) ##27 KIF5B (ENSLCRG00005006461) zgc:162895 (ENSLCRG00005008053) EGFR (ENSLCRG00005008076) tmeff1b (ENSLCRG00005009373) cavin4b (ENSLCRG00005009374) ENSLCRG00005009375 ENSLCRG00005009405 RREB1 (ENSLCRG00005009411) ENSLCRG00005009422 NRN1 (ENSLCRG00005009446) fars2 (ENSLCRG00005009450) ENSLCRG00005009519 ENSLCRG00005009520 ENSLCRG00005009521 Gilthead seabream MODERN SPECIES 10 mos (ENSSAUG00010019704) ENSSAUG00010019705 STEAP2 (ENSSAUG00010019706) alg14 (ENSSAUG00010019707) cnn3b (ENSSAUG00010019709) f3a (ENSSAUG00010019712) CUBN (ENSSAUG00010019746) trdmt1 (ENSSAUG00010019788) RSU1 (ENSSAUG00010019791) C1QL3 (ENSSAUG00010019793) ENSSAUG00010019795 ENSSAUG00010019809 abcd3a (ENSSAUG00010019841) ENSSAUG00010022686 znf438 (ENSSAUG00010024910) zeb1b (ENSSAUG00010024914) ##22 ARHGAP12 (ENSSAUG00010024927) ##27 KIF5B (ENSSAUG00010025131) GFOD1 (ENSSAUG00010025198) SLC12A7 (ENSSAUG00010025206) aoc1 (ENSSAUG00010025246) ENSSAUG00010025249 KCNH2 (ENSSAUG00010025264) ENSSAUG00010025472 ENSSAUG00010025473 ENSSAUG00010025474 ift74 (ENSSAUG00010025475) ENSSAUG00010025476 ENSSAUG00010025477 ENSSAUG00010025478 ENSSAUG00010025479 Tiger tail seahorse MODERN SPECIES 217 ENSHCOG00000012170 FIG4 (ENSHCOG00000012235) GPR6 (ENSHCOG00000012249) ENSHCOG00000012257 ENSHCOG00000012274 KIF25 (ENSHCOG00000012294) WASF1 (ENSHCOG00000012315) cdc40 (ENSHCOG00000012347) METTL24 (ENSHCOG00000012358) slc22a16 (ENSHCOG00000000352) ENSHCOG00000012384 nkain2 (ENSHCOG00000012402) ENSHCOG00000012421 ENSHCOG00000012429 znf438 (ENSHCOG00000012432) zeb1b (ENSHCOG00000012442) ##22 ARHGAP12 (ENSHCOG00000000647) ##27 ENSHCOG00000012502 KIF5B (ENSHCOG00000013812) GFOD1 (ENSHCOG00000013882) SLC12A7 (ENSHCOG00000013938) aoc1 (ENSHCOG00000013959) ENSHCOG00000013975 ENSHCOG00000014194 KCNH2 (ENSHCOG00000014239) ENSHCOG00000014251 morn3 (ENSHCOG00000014269) ift74 (ENSHCOG00000014296) Pinecone sodierfish MODERN SPECIES 12 ENSMMDG00005024355 ENSMMDG00005024342 nrp1a (ENSMMDG00005024274) itgb1a (ENSMMDG00005024151) rab18a (ENSMMDG00005024133) mkxa (ENSMMDG00005024132) ODAD2 (ENSMMDG00005024129) mpp7a (ENSMMDG00005023805) waca (ENSMMDG00005023784) bambia (ENSMMDG00005023778) ENSMMDG00005023777 MTPAP (ENSMMDG00005023773) MAP3K8 (ENSMMDG00005023768) ENSMMDG00005023155 znf438 (ENSMMDG00005023095) zeb1b (ENSMMDG00005023086) ##22 ARHGAP12 (ENSMMDG00005022855) ##27 KIF5B (ENSMMDG00005022830) GFOD1 (ENSMMDG00005022827) ENSMMDG00005022826 SLC12A7 (ENSMMDG00005013588) aoc1 (ENSMMDG00005013421) ENSMMDG00005013406 ENSMMDG00005013402 KCNH2 (ENSMMDG00005021404) ENSMMDG00005021397 MYH6 (ENSMMDG00005021121) MYH6 (ENSMMDG00005021109) MYH6 (ENSMMDG00005019901) ENSMMDG00005019870 cebp1 (ENSMMDG00005019869) Protacanthopterygii ANCESTRAL SPECIES 65 ENSGT00730000111052 ENSGT00940000154673.a.d.a ENSGT00940000154187.a.a ENSGT00940000154187.a.b.a ENSGT00940000157512.j ENSGT00940000157041.b ENSGT00940000155003.e.a ENSGT00940000154801.q.b ENSGT00950000182860.a.a.b.a.b ##27 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00940000154653 ENSGT00940000166891.b ENSGT00950000183073.a.a.a ENSGT00940000166891.a ENSGT00940000158582 ENSGT00940000182537 ENSGT00940000158806 ENSGT00940000154101.b.d ENSGT00440000037780.a ENSGT00940000156232.b.e.a ENSGT00940000156232.b.e.b ENSGT00940000156625 ENSGT00940000156227.f ENSGT00940000164184 ENSGT01090000259987.a.b.d.b.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 686 ENSGT00730000111317.i.a.b ENSGT00940000158167.j ENSGT01030000234510.a.a.a.a.a.b.f.a ENSGT00730000111052.l ENSGT00940000154673.a.d.a.h ENSGT00940000154187.a.a.u ENSGT00940000154187.a.b.a.a ENSGT00940000157512.j.l ENSGT00940000155003.e.a.i ENSGT00940000154801.q.b.a ENSGT00950000182860.a.a.b.a.b.c ##27 ENSGT00390000014526.a ENSGT00950000183208.B.f.a.a ##22 Salmoninae_a ANCESTRAL SPECIES 69 ENSGT00940000155105.g ENSGT00940000157116.f.c ENSGT00940000157866.o.a ENSGT00730000111317.i.a.b ENSGT00940000158167.j ENSGT01030000234510.a.a.a.a.a.b.f.a ENSGT00730000111052.l ENSGT00940000154673.a.d.a.h ENSGT00940000154187.a.a.u ENSGT00940000154187.a.b.a.a ENSGT00940000157512.j.l ENSGT00940000155003.e.a.i ENSGT00940000154801.q.b.a ENSGT00950000182860.a.a.b.a.b.c ##27 ENSGT00390000014526.a ENSGT00950000183208.B.f.a.a ##22 ENSGT00940000154653.fb.b.b ENSGT00940000166891.a.e ENSGT00940000158582.m ENSGT00940000158806.p ENSGT00940000158085.b.a.g ENSGT00940000154926.c ENSGT00940000157169.c.b ENSGT01090000259987.a.b.d.b.b.b ENSGT00940000164184.c.a ENSGT00940000156227.f.h ENSGT00940000156625.f ENSGT00940000156232.b.e.b ENSGT00440000037780.a.w ENSGT00940000154101.b.d.b ENSGT01030000234635.a.b.a.b.b.b.e.a.b Salmo ANCESTRAL SPECIES 34 ENSGT00940000155105.g ENSGT00940000157116.f.c ENSGT00940000157866.o.a ENSGT00730000111317.i.a.b ENSGT00940000158167.j ENSGT01030000234510.a.a.a.a.a.b.f.a ENSGT00730000111052.l ENSGT00940000154673.a.d.a.h ENSGT00940000154187.a.a.u ENSGT00940000154187.a.b.a.a ENSGT00940000157512.j.l ENSGT00940000155003.e.a.i ENSGT00940000154801.q.b.a ENSGT00950000182860.a.a.b.a.b.c ##27 ENSGT00390000014526.a ENSGT00950000183208.B.f.a.a ##22 ENSGT00940000154653.fb.b.b ENSGT00940000166891.a.e ENSGT00940000182537.c ENSGT00940000158806.p ENSGT00940000158085.b.a.g ENSGT00940000154926.c ENSGT00940000157169.c.b ENSGT01090000259987.a.b.d.b.b.b ENSGT00940000164184.c.a ENSGT00940000156227.f.h ENSGT00940000156625.f ENSGT00940000156232.b.e.b ENSGT00440000037780.a.w ENSGT00940000154101.b.d.b ENSGT01030000234635.a.b.a.b.b.b.e.a.b Atlantic salmon MODERN SPECIES 21 ENSSSAG00000063178 ENSSSAG00000119062 ENSSSAG00000110214 ENSSSAG00000063141 ENSSSAG00000081768 CDH6 (ENSSSAG00000107039) CDH10 (ENSSSAG00000050663) CDH12 (ENSSSAG00000050078) ENSSSAG00000032850 CDH18 (ENSSSAG00000048741) ENSSSAG00000104575 EPC1 (ENSSSAG00000101659) ENSSSAG00000006351 ARHGAP12 (ENSSSAG00000045494) ##27 ENSSSAG00000045437 ENSSSAG00000045184 ##22 ENSSSAG00000009399 ENSSSAG00000008891 ENSSSAG00000085460 m3k8 (ENSSSAG00000011939) ENSSSAG00000012040 CUL2 (ENSSSAG00000012342) nrp1a (ENSSSAG00000015164) itgb1a (ENSSSAG00000039442) rab18a (ENSSSAG00000094107) mkxa (ENSSSAG00000050783) ODAD2 (ENSSSAG00000118770) mpp7a (ENSSSAG00000080707) ENSSSAG00000096292 waca (ENSSSAG00000055114) BAMBI (ENSSSAG00000109871) River trout MODERN SPECIES 36 CDH20 (ENSSTUG00000011062) MC4R (ENSSTUG00000011392) ENSSTUG00000011411 ENSSTUG00000011417 CDH6 (ENSSTUG00000011449) ENSSTUG00000011591 ENSSTUG00000011594 CDH10 (ENSSTUG00000011638) CDH12 (ENSSTUG00000012075) CDH18 (ENSSTUG00000012087) ENSSTUG00000012152 EPC1 (ENSSTUG00000012180) KIF5B (ENSSTUG00000012405) ARHGAP12 (ENSSTUG00000012780) ##27 znf438 (ENSSTUG00000012947) zeb1b (ENSSTUG00000012968) ##22 ENSSTUG00000013252 ENSSTUG00000016499 ENSSTUG00000016503 MAP3K8 (ENSSTUG00000016509) klf6a (ENSSTUG00000016520) CUL2 (ENSSTUG00000016548) nrp1a (ENSSTUG00000016876) itgb1a (ENSSTUG00000020085) rab18a (ENSSTUG00000022866) mkxa (ENSSTUG00000022929) ODAD2 (ENSSTUG00000022963) mpp7a (ENSSTUG00000023155) waca (ENSSTUG00000024929) BAMBI (ENSSTUG00000025519) ENSSTUG00000025567 Oncorhynchus ANCESTRAL SPECIES 27 ENSGT00940000155105.g ENSGT00940000157116.f.c ENSGT00940000157866.o.a ENSGT00730000111317.i.a.b ENSGT00940000158167.j ENSGT01030000234510.a.a.a.a.a.b.f.a ENSGT00730000111052.l ENSGT00940000154673.a.d.a.h ENSGT00940000154187.a.a.u ENSGT00940000154187.a.b.a.a ENSGT00940000157512.j.l ENSGT00940000155003.e.a.i ENSGT00940000154801.q.b.a ENSGT00950000182860.a.a.b.a.b.c ##27 ENSGT00390000014526.a ENSGT00950000183208.B.f.a.a ##22 ENSGT00940000154653.fb.b.b ENSGT00940000166891.a.e ENSGT00940000158582.m ENSGT00940000158806.p ENSGT00940000154926.c ENSGT00940000157169.c.b ENSGT01090000259987.a.b.d.b.b.b ENSGT00940000164184.c.a ENSGT00940000156227.f.h ENSGT00940000156625.f ENSGT00940000156232.b.e.b ENSGT00440000037780.a.w ENSGT00940000154101.b.d.b ENSGT01030000234635.a.b.a.b.b.b.e.a.b ENSGT00940000157981.a.a.a.b Rainbow trout MODERN SPECIES 6 ENSOMYG00000064879 MC4R (ENSOMYG00000030554) CDH6 (ENSOMYG00000030610) ENSOMYG00000072881 CDH10 (ENSOMYG00000030883) ENSOMYG00000021025 CDH12 (ENSOMYG00000032206) ENSOMYG00000032234 CDH18 (ENSOMYG00000032244) ENSOMYG00000075256 ENSOMYG00000061474 EPC1 (ENSOMYG00000032289) ENSOMYG00000032837 ARHGAP12 (ENSOMYG00000060235) ##27 ENSOMYG00000034620 ENSOMYG00000032395 ##22 ENSOMYG00000033418 ENSOMYG00000038772 ENSOMYG00000054712 MAP3K8 (ENSOMYG00000038819) CUL2 (ENSOMYG00000039019) ENSOMYG00000071814 ENSOMYG00000057173 nrp1a (ENSOMYG00000039540) itgb1a (ENSOMYG00000040711) rab18a (ENSOMYG00000043516) mkxa (ENSOMYG00000043537) ODAD2 (ENSOMYG00000065877) mpp7a (ENSOMYG00000043561) waca (ENSOMYG00000043597) BAMBI (ENSOMYG00000043656) Oncorhynchus_a ANCESTRAL SPECIES 27 ENSGT00940000155105.g ENSGT00940000157116.f.c ENSGT00940000157866.o.a ENSGT00730000111317.i.a.b ENSGT00940000158167.j ENSGT01030000234510.a.a.a.a.a.b.f.a ENSGT00730000111052.l ENSGT00940000154673.a.d.a.h ENSGT00940000154187.a.a.u ENSGT00940000154187.a.b.a.a ENSGT00940000157512.j.l ENSGT00940000155003.e.a.i ENSGT00940000154801.q.b.a ENSGT00950000182860.a.a.b.a.b.c ##27 ENSGT00390000014526.a ENSGT00950000183208.B.f.a.a ##22 ENSGT00940000154653.fb.b.b ENSGT00940000166891.a.e ENSGT00940000158582.m ENSGT00940000158806.p ENSGT00940000154926.c ENSGT00940000157169.c.b ENSGT01090000259987.a.b.d.b.b.b ENSGT00940000164184.c.a ENSGT00940000156227.f.h ENSGT00940000156625.f ENSGT00940000156232.b.e.b ENSGT00440000037780.a.w ENSGT00940000154101.b.d.b ENSGT01030000234635.a.b.a.b.b.b.e.a.b ENSGT00940000157981.a.a.a.b Coho salmon MODERN SPECIES 2 CDH6 (ENSOKIG00005046231) ENSOKIG00005046139 ENSOKIG00005046133 CDH10 (ENSOKIG00005045916) ENSOKIG00005045899 CDH12 (ENSOKIG00005045812) ENSOKIG00005045776 ENSOKIG00005045763 CDH18 (ENSOKIG00005045744) EPC1 (ENSOKIG00005045007) ENSOKIG00005044949 KIF5B (ENSOKIG00005044683) ENSOKIG00005044643 ARHGAP12 (ENSOKIG00005044073) ##27 znf438 (ENSOKIG00005043989) ZEB1 (ENSOKIG00005043958) ##22 ENSOKIG00005042887 ENSOKIG00005042712 ENSOKIG00005042699 ENSOKIG00005042609 MAP3K8 (ENSOKIG00005042568) zc3h15 (ENSOKIG00005042546) ATP5MC3 (ENSOKIG00005042507) ENSOKIG00005042299 ENSOKIG00005042238 BAMBI (ENSOKIG00005042201) waca (ENSOKIG00005042001) mpp7a (ENSOKIG00005040769) ODAD2 (ENSOKIG00005040553) mkxa (ENSOKIG00005040523) rab18a (ENSOKIG00005040468) Chinook salmon MODERN SPECIES 21 eci2 (ENSOTSG00005017336) inhbaa (ENSOTSG00005017858) sugct (ENSOTSG00005017860) RNF152 (ENSOTSG00005017876) CDH20 (ENSOTSG00005017877) MC4R (ENSOTSG00005017881) CDH6 (ENSOTSG00005017886) ENSOTSG00005017891 CDH10 (ENSOTSG00005017912) CDH12 (ENSOTSG00005019301) CDH18 (ENSOTSG00005019302) EPC1 (ENSOTSG00005019308) KIF5B (ENSOTSG00005019345) ARHGAP12 (ENSOTSG00005019848) ##27 znf438 (ENSOTSG00005025936) zeb1b (ENSOTSG00005025939) ##22 ENSOTSG00005025983 ENSOTSG00005035218 MAP3K8 (ENSOTSG00005035222) nrp1a (ENSOTSG00005035226) itgb1a (ENSOTSG00005035895) rab18a (ENSOTSG00005040696) mkxa (ENSOTSG00005040722) ENSOTSG00005040723 mpp7a (ENSOTSG00005040724) waca (ENSOTSG00005041777) BAMBI (ENSOTSG00005041792) ENSOTSG00005041799 atp5mc3b (ENSOTSG00005041910) zc3h15 (ENSOTSG00005041911) CUL2 (ENSOTSG00005041916) Huchen MODERN SPECIES 184 ENSHHUG00000009415 ENSHHUG00000009419 tusc3 (ENSHHUG00000009491) fgf20a (ENSHHUG00000009511) ENSHHUG00000009534 EPC1 (ENSHHUG00000009558) KIF5B (ENSHHUG00000009601) ARHGAP12 (ENSHHUG00000009867) ##27 znf438 (ENSHHUG00000011023) zeb1b (ENSHHUG00000011035) ##22 Salmoninae ANCESTRAL SPECIES 872 ENSGT00940000157041.b ENSGT00940000155003.e.a.j ENSGT00940000154801.q.b.b ENSGT00950000182860.a.a.b.a.b.d ##27 ENSGT00390000014526.b ENSGT00950000183208.B.f.a.b ##22 ENSGT00940000154653.fb.b.a ENSGT00940000166891.a.f Salmoninae_a ANCESTRAL SPECIES 32 ENSGT00940000157116.f.d ENSGT00940000157866.o.b ENSGT00730000111317.i.a.a ENSGT00940000158167.i ENSGT01030000234510.a.a.a.a.a.b.f.b ENSGT00730000111052.k ENSGT00940000154673.a.d.a.g ENSGT00940000154187.a.a.v ENSGT00940000154187.a.b.a.b ENSGT00940000157512.j.k ENSGT00940000157041.b ENSGT00940000155003.e.a.j ENSGT00940000154801.q.b.b ENSGT00950000182860.a.a.b.a.b.d ##27 ENSGT00390000014526.b ENSGT00950000183208.B.f.a.b ##22 ENSGT00940000154653.fb.b.a ENSGT00940000166891.a.f ENSGT00940000158582.n ENSGT00940000158806.o ENSGT00940000154101.b.d.a ENSGT00440000037780.a.x ENSGT00940000156232.b.e.a ENSGT00940000156625.e ENSGT00940000156227.f.g ENSGT00940000164184.c.b ENSGT01090000259987.a.b.d.b.b.a ENSGT00940000157169.c.a ENSGT00950000183214.a.a.a.b ENSGT00940000154926.d ENSGT00940000156952.a.a Oncorhynchus ANCESTRAL SPECIES 28 ENSGT00940000157116.f.d ENSGT00940000157866.o.b ENSGT00730000111317.i.a.a ENSGT00940000158167.i ENSGT01030000234510.a.a.a.a.a.b.f.b ENSGT00730000111052.k ENSGT00940000154673.a.d.a.g ENSGT00940000154187.a.a.v ENSGT00940000154187.a.b.a.b ENSGT00940000157512.j.k ENSGT00940000157041.b ENSGT00940000155003.e.a.j ENSGT00940000154801.q.b.b ENSGT00950000182860.a.a.b.a.b.d ##27 ENSGT00390000014526.b ENSGT00950000183208.B.f.a.b ##22 ENSGT01100000264663 ENSGT00940000154653.fb.b.a ENSGT00940000166891.a.f ENSGT00940000158582.n ENSGT00940000158806.o ENSGT00940000154101.b.d.a ENSGT00440000037780.a.x ENSGT00940000156232.b.e.a ENSGT00940000156625.e ENSGT00940000156227.f.g ENSGT00940000164184.c.b ENSGT01090000259987.a.b.d.b.b.a ENSGT00940000157169.c.a ENSGT00950000183214.a.a.a.b ENSGT00940000154926.d Oncorhynchus_a ANCESTRAL SPECIES 23 ENSGT00940000155105.h ENSGT00940000157116.f.d ENSGT00730000111317.i.a.a ENSGT00940000158167.i ENSGT01030000234510.a.a.a.a.a.b.f.b ENSGT00730000111052.k ENSGT00940000154673.a.d.a.g ENSGT00940000154187.a.a.v ENSGT00940000154187.a.b.a.b ENSGT00940000157512.j.k ENSGT00940000157041.b ENSGT00940000155003.e.a.j ENSGT00940000154801.q.b.b ENSGT00950000182860.a.a.b.a.b.d ##27 ENSGT00390000014526.b ENSGT00950000183208.B.f.a.b ##22 ENSGT01100000264663 ENSGT00940000154653.fb.b.a ENSGT00940000166891.a.f ENSGT00940000158582.n ENSGT00940000158806.o ENSGT00940000154101.b.d.a ENSGT00440000037780.a.x ENSGT00940000156232.b.e.a ENSGT00940000156625.e ENSGT00940000156227.f.g ENSGT00940000164184.c.b ENSGT01090000259987.a.b.d.b.b.a ENSGT00940000157169.c.a ENSGT00950000183214.a.a.a.b ENSGT00940000154926.d Chinook salmon MODERN SPECIES 7 inhbaa (ENSOTSG00005043873) ENSOTSG00005043871 RNF152 (ENSOTSG00005043870) CDH20 (ENSOTSG00005043869) MC4R (ENSOTSG00005043868) drosha (ENSOTSG00005039900) CDH6 (ENSOTSG00005039881) CDH10 (ENSOTSG00005039870) CDH12 (ENSOTSG00005039860) CDH18 (ENSOTSG00005039856) ENSOTSG00005039854 EPC1 (ENSOTSG00005039244) KIF5B (ENSOTSG00005038406) ARHGAP12 (ENSOTSG00005033976) ##27 znf438 (ENSOTSG00005033960) zeb1b (ENSOTSG00005033956) ##22 ENSOTSG00005033953 ENSOTSG00005033499 ENSOTSG00005033491 MTPAP (ENSOTSG00005033487) MAP3K8 (ENSOTSG00005033486) BAMBI (ENSOTSG00005033485) waca (ENSOTSG00005033481) mpp7a (ENSOTSG00005033478) ENSOTSG00005033468 ODAD2 (ENSOTSG00005033457) mkxa (ENSOTSG00005033456) RAB18 (ENSOTSG00005033455) itgb1a (ENSOTSG00005033080) nrp1a (ENSOTSG00005029405) ENSOTSG00005029384 Coho salmon MODERN SPECIES 9 CDH20 (ENSOKIG00005026691) ENSOKIG00005026849 MC4R (ENSOKIG00005026861) ENSOKIG00005026871 drosha (ENSOKIG00005027191) CDH6 (ENSOKIG00005032621) CDH10 (ENSOKIG00005032911) CDH12 (ENSOKIG00005033346) CDH18 (ENSOKIG00005033372) ENSOKIG00005033452 ENSOKIG00005033458 EPC1 (ENSOKIG00005033494) KIF5B (ENSOKIG00005033771) ARHGAP12 (ENSOKIG00005034050) ##27 ZNF438 (ENSOKIG00005038192) zeb1b (ENSOKIG00005038206) ##22 ENSOKIG00005038321 ENSOKIG00005039935 MTPAP (ENSOKIG00005039961) MAP3K8 (ENSOKIG00005040048) BAMBI (ENSOKIG00005040069) waca (ENSOKIG00005040111) mpp7a (ENSOKIG00005040291) ENSOKIG00005040430 ODAD2 (ENSOKIG00005040450) mkxa (ENSOKIG00005040616) rab18a (ENSOKIG00005040685) itgb1a (ENSOKIG00005041004) nrp1a (ENSOKIG00005043272) ENSOKIG00005018879 ENSOKIG00005019041 Rainbow trout MODERN SPECIES 2 ENSOMYG00000013006 CDH10 (ENSOMYG00000006519) CDH12 (ENSOMYG00000005817) CDH18 (ENSOMYG00000005682) ENSOMYG00000061459 ENSOMYG00000056270 ENSOMYG00000005483 ENSOMYG00000005450 ENSOMYG00000061063 EPC1 (ENSOMYG00000005380) ENSOMYG00000005192 ARHGAP12 (ENSOMYG00000004594) ##27 ZNF438 (ENSOMYG00000004318) ENSOMYG00000074715 ENSOMYG00000072334 ZEB1 (ENSOMYG00000004277) ##22 ENSOMYG00000076577 ENSOMYG00000075833 ENSOMYG00000003956 ENSOMYG00000003613 ENSOMYG00000003462 ENSOMYG00000003225 bambia (ENSOMYG00000003211) waca (ENSOMYG00000003159) mpp7a (ENSOMYG00000036835) ODAD2 (ENSOMYG00000036747) ENSOMYG00000052635 mkxa (ENSOMYG00000036696) ENSOMYG00000056807 rab18a (ENSOMYG00000036658) itgb1a (ENSOMYG00000035502) Salmo ANCESTRAL SPECIES 3 ENSGT00940000157116.f.d ENSGT00940000157866.o.b ENSGT00730000111317.i.a.a ENSGT00940000158167.i ENSGT01030000234510.a.a.a.a.a.b.f.b ENSGT00730000111052.k ENSGT00940000154673.a.d.a.g ENSGT00940000154187.a.a.v ENSGT00940000154673.b ENSGT00940000157512.j.k ENSGT00940000157041.b ENSGT00940000155003.e.a.j ENSGT00940000154801.q.b.b ENSGT00950000182860.a.a.b.a.b.d ##27 ENSGT00390000014526.b ENSGT00950000183208.B.f.a.b ##22 ENSGT00940000154653.fb.b.a ENSGT00940000166891.a.f ENSGT00940000158582.n ENSGT00940000158806.o ENSGT00940000154101.b.d.a ENSGT00440000037780.a.x ENSGT00940000156232.b.e.a ENSGT00940000156625.e ENSGT00940000156227.f.g ENSGT00940000164184.c.b ENSGT01090000259987.a.b.d.b.b.a ENSGT00940000157169.c.a ENSGT00950000183214.a.a.a.b ENSGT00940000154926.d ENSGT00940000156952.a.a Atlantic salmon MODERN SPECIES 10 ENSSSAG00000053313 ENSSSAG00000108093 DROSHA (ENSSSAG00000046212) ENSSSAG00000038765 CDH6 (ENSSSAG00000101424) CDH10 (ENSSSAG00000011692) ENSSSAG00000010432 ENSSSAG00000095085 CDH18 (ENSSSAG00000008256) ENSSSAG00000082925 ENSSSAG00000008187 EPC1 (ENSSSAG00000007604) ENSSSAG00000048030 ARHGAP12 (ENSSSAG00000080981) ##27 ZNF438 (ENSSSAG00000080964) ZEB1 (ENSSSAG00000080962) ##22 ENSSSAG00000080948 ENSSSAG00000080941 ENSSSAG00000080931 ENSSSAG00000080928 BAMBI (ENSSSAG00000080921) waca (ENSSSAG00000080915) ENSSSAG00000096611 mpp7a (ENSSSAG00000050856) ODAD2 (ENSSSAG00000080633) rab18a (ENSSSAG00000089395) itgb1a (ENSSSAG00000080301) nrp1a (ENSSSAG00000080111) ENSSSAG00000079460 cul2 (ENSSSAG00000078936) CREM (ENSSSAG00000106238) River trout MODERN SPECIES 11 RNF152 (ENSSTUG00000009425) CDH20 (ENSSTUG00000009305) MC4R (ENSSTUG00000009292) drosha (ENSSTUG00000007834) CDH6 (ENSSTUG00000007704) CDH10 (ENSSTUG00000007469) CDH12 (ENSSTUG00000007434) ENSSTUG00000007427 CDH18 (ENSSTUG00000007280) ENSSTUG00000007228 ENSSTUG00000007220 EPC1 (ENSSTUG00000006867) KIF5B (ENSSTUG00000006587) ARHGAP12 (ENSSTUG00000005991) ##27 znf438 (ENSSTUG00000005959) zeb1b (ENSSTUG00000005941) ##22 ENSSTUG00000001575 ENSSTUG00000001379 MTPAP (ENSSTUG00000001338) MAP3K8 (ENSSTUG00000001322) BAMBI (ENSSTUG00000001312) waca (ENSSTUG00000001303) ENSSTUG00000001295 ODAD2 (ENSSTUG00000001156) mkxa (ENSSTUG00000024790) rab18a (ENSSTUG00000024744) itgb1a (ENSSTUG00000021965) nrp1a (ENSSTUG00000021217) ENSSTUG00000020681 CUL2 (ENSSTUG00000020453) CREM (ENSSTUG00000020410) Huchen MODERN SPECIES 207 ENSHHUG00000042111 ENSHHUG00000042109 EPC1 (ENSHHUG00000042033) KIF5B (ENSHHUG00000041946) ARHGAP12 (ENSHHUG00000041480) ##27 znf438 (ENSHHUG00000041472) zeb1b (ENSHHUG00000041470) ##22 ENSHHUG00000041151 ENSHHUG00000041138 Northern pike MODERN SPECIES 20 CDH20 (ENSELUG00000004604) MC4R (ENSELUG00000015117) drosha (ENSELUG00000015039) CDH6 (ENSELUG00000014907) ENSELUG00000032097 ENSELUG00000033527 CDH10 (ENSELUG00000004584) ENSELUG00000027912 CDH12 (ENSELUG00000004551) CDH18 (ENSELUG00000004503) ENSELUG00000004464 EPC1 (ENSELUG00000004429) ENSELUG00000004374 ARHGAP12 (ENSELUG00000004304) ##27 znf438 (ENSELUG00000004205) zeb1b (ENSELUG00000004153) ##22 ENSELUG00000004106 ENSELUG00000004069 MTPAP (ENSELUG00000004043) MAP3K8 (ENSELUG00000004025) bambia (ENSELUG00000033421) waca (ENSELUG00000003999) mpp7a (ENSELUG00000003957) ODAD2 (ENSELUG00000003879) mkxa (ENSELUG00000003841) rab18a (ENSELUG00000003805) itgb1a (ENSELUG00000003788) nrp1a (ENSELUG00000003760) ENSELUG00000027734 ENSELUG00000010211 ENSELUG00000003709 Otomorpha ANCESTRAL SPECIES 115 ENSGT00940000164239.b.b ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b.c.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00940000166891.a ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.a.a.a ##27 ENSGT00940000154801.m.a ENSGT00940000155003.e.a ENSGT00940000157041.b ENSGT00940000157512.j ENSGT00940000154673.a.d.a ENSGT00730000111052 ENSGT00940000156069 ENSGT00390000010255 ENSGT00390000001455 ENSGT00950000183098.b.a.b ENSGT00530000064112.b.b ENSGT00940000166207 ENSGT00390000006738.b Clupeiformes ANCESTRAL SPECIES 333 ENSGT00940000158806 ENSGT00940000158582 ENSGT00940000166891.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.a.b ##27 ENSGT00940000154801.m.a ENSGT00940000155003.e.a ENSGT00940000157512.j ENSGT00940000154673.b ENSGT00940000154187.a.a ENSGT00940000154673.a.d.a ENSGT00730000111052 Denticle herring MODERN SPECIES 11 SEC22C (ENSDCDG00000035827) vipr1b (ENSDCDG00000035825) ENSDCDG00000035823 rmc1 (ENSDCDG00000035816) ENSDCDG00000035745 ssr1 (ENSDCDG00000035662) ENSDCDG00000035660 ENSDCDG00000035659 zgc:162895 (ENSDCDG00000035656) RAMP3 (ENSDCDG00000035655) ANKS6 (ENSDCDG00000035653) ENSDCDG00000035649 pigm (ENSDCDG00000035647) svila (ENSDCDG00000035445) znf438 (ENSDCDG00000035414) zeb1b (ENSDCDG00000035410) ##22 ARHGAP12 (ENSDCDG00000035370) ##27 KIF5B (ENSDCDG00000035349) EPC1 (ENSDCDG00000035336) CDH18 (ENSDCDG00000035306) ENSDCDG00000035219 CDH10 (ENSDCDG00000035129) CDH6 (ENSDCDG00000034781) drosha (ENSDCDG00000034730) ENSDCDG00000034713 ENSDCDG00000034711 MC4R (ENSDCDG00000034707) CDH20 (ENSDCDG00000034469) bambia (ENSDCDG00000034459) waca (ENSDCDG00000034456) mpp7a (ENSDCDG00000034212) Atlantic herring MODERN SPECIES 8 STEAP2 (ENSCHAG00000010874) MMP16 (ENSCHAG00000010887) ENSCHAG00000011203 ENSCHAG00000011216 ENSCHAG00000011316 ENSCHAG00000011434 cpne3 (ENSCHAG00000011525) ENSCHAG00000011925 MTPAP (ENSCHAG00000011945) ENSCHAG00000011992 svila (ENSCHAG00000012071) ENSCHAG00000013517 ENSCHAG00000013574 ENSCHAG00000013590 znf438 (ENSCHAG00000013601) zeb1b (ENSCHAG00000013673) ##22 ENSCHAG00000013685 arhgap12b (ENSCHAG00000013722) ##27 KIF5B (ENSCHAG00000014651) EPC1 (ENSCHAG00000014987) CDH18 (ENSCHAG00000015373) ENSCHAG00000015500 ENSCHAG00000015519 CDH10 (ENSCHAG00000015571) CDH6 (ENSCHAG00000016252) drosha (ENSCHAG00000017165) MC4R (ENSCHAG00000019226) snx16 (ENSCHAG00000019244) ENSCHAG00000019304 rmdn1 (ENSCHAG00000021503) ENSCHAG00000021580 Otophysi ANCESTRAL SPECIES 48 ENSGT00390000012556 ENSGT00950000182850.a.b.a.a ENSGT00950000183067.a.a ENSGT00940000164184 ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000154101.b.c.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00940000166891.a ENSGT00940000166891.b ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.a.a.a ##27 ENSGT00940000154801.m.a ENSGT00940000155003.e.a ENSGT00940000157041.b ENSGT00940000157512.j.c Characiphysae ANCESTRAL SPECIES 1 ENSGT00390000006009.a.a.a.c.a ENSGT00940000159339.sb.a ENSGT00940000159924.d ENSGT00940000161333 ENSGT00940000153536.a.b.a.a ENSGT00940000158181.c ENSGT00940000153251.b.b ENSGT00940000157276.d ENSGT00440000037780.a ENSGT00940000154101.b.c.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00940000166891.a ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.a.a.a ##27 ENSGT00940000154801.m.a ENSGT00940000155003.e.a.f ENSGT00940000157041.b ENSGT00940000157512.j.c ENSGT00940000154187.a.b.a ENSGT00940000158172 ENSGT00940000160989 ENSGT00940000161939 ENSGT00390000017004.a.b.z ENSGT00940000164397.a ENSGT00940000157107.a.a ENSGT00390000018119 ENSGT00390000018109 ENSGT00530000063652.b.a Channel catfish MODERN SPECIES 4 nog3 (ENSIPUG00000012282) enpp7.2 (ENSIPUG00000012257) RBFOX3 (ENSIPUG00000012010) C1qtnf1 (ENSIPUG00000011969) csnk1db (ENSIPUG00000011868) slc16a3 (ENSIPUG00000011838) Ccdc57 (ENSIPUG00000011706) ccdc57 (ENSIPUG00000011606) wac (ENSIPUG00000011534) bambia (ENSIPUG00000011523) map3k8 (ENSIPUG00000011487) Mtpap (ENSIPUG00000011455) kiaa1462 (ENSIPUG00000011429) svila (ENSIPUG00000011322) ZNF438 (ENSIPUG00000011294) ZEB1 (ENSIPUG00000011262) ##22 arhgap12 (ENSIPUG00000011035) ##27 kif5b (ENSIPUG00000010770) epc1 (ENSIPUG00000010736) ENSIPUG00000010558 CDH18 (ENSIPUG00000010490) CDH12 (ENSIPUG00000010450) ENSIPUG00000010429 CDH10 (ENSIPUG00000010357) ENSIPUG00000010249 kif19 (ENSIPUG00000010228) dnai2a (ENSIPUG00000010195) ppa1a (ENSIPUG00000010154) sar1aa (ENSIPUG00000010046) SPOCK2 (ENSIPUG00000010004) ascc1 (ENSIPUG00000009943) Characiphysae_b ANCESTRAL SPECIES 3 ENSGT00390000006009.a.a.a.c.a ENSGT00940000159339.sb.a ENSGT00940000159924.d ENSGT00940000161333 ENSGT00940000153536.a.b.a.a ENSGT00940000158181.c ENSGT00940000153251.b.b ENSGT00940000157276.d ENSGT00440000037780.a ENSGT00940000154101.b.c.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00940000166891.a ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.a.a.a ##27 ENSGT00940000154801.m.a ENSGT00940000155003.e.a.f ENSGT00940000157041.b ENSGT00940000157512.j.c ENSGT00940000154673.b ENSGT00940000154187.a.a ENSGT00940000158172 ENSGT00940000160989 ENSGT00940000163996 ENSGT00390000017004.a.b.z ENSGT00940000164397.a ENSGT00940000157107.a.a ENSGT00390000018119 ENSGT00390000018109 Characoidei ANCESTRAL SPECIES 6 ENSGT00390000006009.a.a.a.d.b ENSGT00940000159339.sb.a ENSGT00940000159924.d ENSGT00940000161333 ENSGT00940000153536.a.b.a.a ENSGT00940000158181.c ENSGT00940000153251.b.b ENSGT00940000157276.d ENSGT00440000037780.a ENSGT00940000154101.b.c.b ENSGT00940000158806 ENSGT00940000158582 ENSGT00940000166891.a ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.a.a.a ##27 ENSGT00940000154801.m.a ENSGT00940000155003.e.a.f ENSGT00940000157041.b ENSGT00940000157512.j.c ENSGT00940000158167 ENSGT01030000235211 ENSGT00940000154187.a.a ENSGT00940000158172 ENSGT00940000160989 ENSGT00940000163996 ENSGT00390000017004.a.b.z ENSGT00940000164397.a ENSGT00940000157107.a.a ENSGT00390000018119 Red-bellied piranha MODERN SPECIES 3 zeb1b (ENSPNAG00000008338) ##22 arhgap12b (ENSPNAG00000000969) ##27 KIF5B (ENSPNAG00000001000) EPC1 (ENSPNAG00000008437) ENSPNAG00000001038 CDH18 (ENSPNAG00000008497) ENSPNAG00000008507 ABCA5 (ENSPNAG00000008549) KIF19 (ENSPNAG00000001096) ENSPNAG00000008587 ppa1a (ENSPNAG00000008606) ENSPNAG00000001123 SPOCK2 (ENSPNAG00000008632) ascc1 (ENSPNAG00000008666) anapc16 (ENSPNAG00000008680) ddit4 (ENSPNAG00000001155) Mexicana tetra MODERN SPECIES 21 nudt12 (ENSAMXG00000012458) ENSAMXG00000012463 SLC12A2 (ENSAMXG00000012506) ZNF608 (ENSAMXG00000012563) CEP120 (ENSAMXG00000012576) PRDM6 (ENSAMXG00000012588) ENSAMXG00000032577 PPIC (ENSAMXG00000041489) SNX2 (ENSAMXG00000012664) sncaip (ENSAMXG00000012696) MAP3K8 (ENSAMXG00000043547) MTPAP (ENSAMXG00000043393) ENSAMXG00000012655 svila (ENSAMXG00000012684) znf438 (ENSAMXG00000043210) zeb1b (ENSAMXG00000012742) ##22 arhgap12b (ENSAMXG00000012750) ##27 KIF5B (ENSAMXG00000012765) EPC1 (ENSAMXG00000012778) ENSAMXG00000012793 CDH18 (ENSAMXG00000011752) ENSAMXG00000031380 ENSAMXG00000031288 ENSAMXG00000011742 ENSAMXG00000039922 ENSAMXG00000041629 ENSAMXG00000033939 ENSAMXG00000011737 ENSAMXG00000011731 KIF19 (ENSAMXG00000011728) ENSAMXG00000011727 Electric eel MODERN SPECIES 123 ENSEEEG00000002480 znf438 (ENSEEEG00000002485) zeb1b (ENSEEEG00000002487) ##22 arhgap12b (ENSEEEG00000002491) ##27 KIF5B (ENSEEEG00000002687) EPC1 (ENSEEEG00000003757) CDH18 (ENSEEEG00000003796) ENSEEEG00000004020 CDH10 (ENSEEEG00000004376) Cyprinoidei ANCESTRAL SPECIES 18 ENSGT00940000162682.B.a ENSGT00940000166248.a ENSGT00390000016335.h ENSGT00950000183098.a.b ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000158354.c.a ENSGT00940000165065.b ENSGT00940000161529.v ENSGT00940000165637 ENSGT00940000157457 ENSGT00940000161032 ENSGT00950000182832.A ENSGT00390000018292.c ENSGT00390000014526 ENSGT00950000183208.B.f.a ##22 ENSGT00950000182860.a.a.b.a.a.a.a ##27 ENSGT00390000014852.a ENSGT01060000253731 ENSGT00940000158336 ENSGT00940000159666.c ENSGT00940000166090 ENSGT00390000016682 ENSGT00940000161826.C ENSGT00940000156830.a ENSGT00940000164193 ENSGT00390000000111.a.n ENSGT01090000259987.b.b.a.a.a.b ENSGT00950000183054.b.c ENSGT00950000183027.a.b.c.b ENSGT00940000155571.B Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 88 ENSGT00940000161341.a.a.b ENSGT00940000166248.a.a ENSGT00390000016335.h.i ENSGT00950000183098.a.b.b ENSGT00390000017856.b.b ENSGT00940000159503.i ENSGT00940000158354.c.a.a.b ENSGT00940000165065.b.a ENSGT00940000161529.v.a ENSGT00940000165637.c ENSGT00940000157457.d ENSGT00940000161032.f ENSGT00950000182832.A.h ENSGT00390000018292.c.a ENSGT00390000014526.c ENSGT00950000183208.B.f.a.c ##22 ENSGT00950000182860.a.a.b.a.a.a.a.a ##27 ENSGT00390000014852.a.o ENSGT01060000253731 ENSGT00940000158336.cb ENSGT00940000159666.c.a ENSGT00940000166090.c ENSGT00390000016682.g ENSGT00940000156830.a.d ENSGT00940000161826.C.s ENSGT00390000000111.a.n.d ENSGT01090000259987.b.b.a.a.a.b.a ENSGT00950000183054.b.c.c ENSGT00950000183027.a.b.c.b.d ENSGT00940000155571.B.g ENSGT01100000263502.B.a.a.d.a.b.b Cyprininae_a ANCESTRAL SPECIES 8 ENSGT00940000161341.a.a.b ENSGT00940000166248.a.a ENSGT00390000016335.h.i ENSGT00950000183098.a.b.b ENSGT00390000017856.b.b ENSGT00940000159503.i ENSGT00940000158354.c.a.a.b ENSGT00940000165065.b.a ENSGT00940000161529.v.a ENSGT00940000165637.c ENSGT00940000157457.d ENSGT00940000161032.f ENSGT00950000182832.A.h ENSGT00390000018292.c.a ENSGT00390000014526.c ENSGT00950000183208.B.f.a.c ##22 ENSGT00950000182860.a.a.b.a.a.a.a.a ##27 ENSGT00390000014852.a.o ENSGT01060000253731 ENSGT00940000158336.cb ENSGT00940000159666.c.a ENSGT00940000166090.c ENSGT00390000016682.g ENSGT00940000156830.a.d ENSGT00940000161826.C.s ENSGT00390000000111.a.n.d ENSGT01090000259987.b.b.a.a.a.b.a ENSGT00950000183054.b.c.c ENSGT00950000183027.a.b.c.b.d ENSGT00940000155571.B.g ENSGT01100000263502.B.a.a.d.a.b.b Golden-line barbel MODERN SPECIES 46 SOST (ENSSGRG00000040536) ENSSGRG00000040538 tmem106a (ENSSGRG00000040547) nbr1a (ENSSGRG00000040549) psme3 (ENSSGRG00000040553) hoxb1b (ENSSGRG00000040584) hoxb5b (ENSSGRG00000040587) hoxb6b (ENSSGRG00000040588) hoxb8b (ENSSGRG00000040592) ttll6 (ENSSGRG00000040593) ENSSGRG00000040598 ENSSGRG00000040895 chmp2a (ENSSGRG00000040897) ENSSGRG00000040900 znf438 (ENSSGRG00000040902) zeb1b (ENSSGRG00000040903) ##22 arhgap12b (ENSSGRG00000040907) ##27 hexdc (ENSSGRG00000041945) kctd2 (ENSSGRG00000041953) SLC16A5 (ENSSGRG00000041954) ENSSGRG00000041958 ENSSGRG00000041962 acsf2 (ENSSGRG00000041963) chad (ENSSGRG00000041964) ndel1a (ENSSGRG00000041969) SYNPO2L (ENSSGRG00000042072) myoz1b (ENSSGRG00000042073) USP54 (ENSSGRG00000042083) ldb3b (ENSSGRG00000042198) bmpr1ab (ENSSGRG00000042201) ENSSGRG00000042600 Common carp reference MODERN SPECIES 44 arl4d (ENSCCRG00000066519) tmem106a (ENSCCRG00000026645) nbr1a (ENSCCRG00000026638) psme3 (ENSCCRG00000026630) skap1 (ENSCCRG00000067435) hoxb1b (ENSCCRG00000059958) hoxb5b (ENSCCRG00000077433) hoxb6b (ENSCCRG00000072472) hoxb8b (ENSCCRG00000020862) ttll6 (ENSCCRG00000082831) ENSCCRG00000053447 ENSCCRG00000064125 chmp2a (ENSCCRG00000055621) ENSCCRG00000026568 znf438 (ENSCCRG00000001407) zeb1b (ENSCCRG00000022405) ##22 arhgap12b (ENSCCRG00000022361) ##27 hexdc (ENSCCRG00000022345) ENSCCRG00000067766 kctd2 (ENSCCRG00000022343) ENSCCRG00000022342 ENSCCRG00000077651 ENSCCRG00000022334 acsf2 (ENSCCRG00000051198) chad (ENSCCRG00000051208) ndel1a (ENSCCRG00000022312) itgb3b (ENSCCRG00000022120) SYNPO2L (ENSCCRG00000071574) myoz1b (ENSCCRG00000022104) USP54 (ENSCCRG00000048001) opn4b (ENSCCRG00000007607) Goldfish MODERN SPECIES 30 ENSCARG00000052540 arl4d (ENSCARG00000052530) tmem106a (ENSCARG00000052511) nbr1a (ENSCARG00000052493) psme3 (ENSCARG00000051902) skap1 (ENSCARG00000051804) hoxb1b (ENSCARG00000051783) hoxb5b (ENSCARG00000051767) hoxb6b (ENSCARG00000051756) hoxb8b (ENSCARG00000051736) ENSCARG00000051549 ENSCARG00000051487 chmp2a (ENSCARG00000051448) ENSCARG00000051427 znf438 (ENSCARG00000051386) zeb1b (ENSCARG00000051305) ##22 arhgap12b (ENSCARG00000050604) ##27 kctd2 (ENSCARG00000050524) SLC16A5 (ENSCARG00000050494) ABCB3c (ENSCARG00000049990) ENSCARG00000049916 chad (ENSCARG00000049900) acsf2 (ENSCARG00000049255) ndel1a (ENSCARG00000049090) itgb3b (ENSCARG00000048660) SYNPO2L (ENSCARG00000048568) myoz1b (ENSCARG00000048546) USP54 (ENSCARG00000048510) opn4b (ENSCARG00000048419) ldb3b (ENSCARG00000048377) bmpr1ab (ENSCARG00000047052) Cyprininae ANCESTRAL SPECIES 64 ENSGT01060000253506 ENSGT00940000166248.a.b ENSGT00390000016335.h.j ENSGT00950000183098.a.b.a ENSGT00390000017856.b.a ENSGT00940000159503.j ENSGT00940000158354.c.a.a.a ENSGT00940000165065.b.b ENSGT00940000161529.v.b ENSGT00940000165637.d ENSGT00940000157457.c ENSGT00940000161032.e ENSGT00950000182832.A.g ENSGT00390000018292.c.b ENSGT00390000014526.d ENSGT00950000183208.B.f.a.d ##22 ENSGT00950000182860.a.a.b.a.a.a.a.b ##27 ENSGT00390000014852.a.p ENSGT00940000158336.bb ENSGT00940000159666.c.b ENSGT00940000166090.d ENSGT00390000016682.h ENSGT00940000161826.C.t ENSGT00940000156830.a.c ENSGT00940000164193 ENSGT00390000000111.a.n.c ENSGT01090000259987.b.b.a.a.a.b.b ENSGT00950000183054.b.c.d ENSGT00950000183027.a.b.c.b.c ENSGT00940000155571.B.h ENSGT01100000263502.B.a.a.d.a.b.a Goldfish MODERN SPECIES 3 arl4d (ENSCARG00000014648) tmem106a (ENSCARG00000014654) nbr1a (ENSCARG00000014661) psme3 (ENSCARG00000014694) skap1 (ENSCARG00000015074) hoxb1b (ENSCARG00000015115) hoxb5b (ENSCARG00000015132) hoxb6b (ENSCARG00000015140) hoxb8b (ENSCARG00000015146) ttll6 (ENSCARG00000015173) ENSCARG00000015297 ENSCARG00000016160 chmp2a (ENSCARG00000016213) ENSCARG00000016223 znf438 (ENSCARG00000016234) zeb1b (ENSCARG00000016251) ##22 arhgap12b (ENSCARG00000016298) ##27 hexdc (ENSCARG00000017121) kctd2 (ENSCARG00000017132) SLC16A5 (ENSCARG00000017150) acsf2 (ENSCARG00000017179) chad (ENSCARG00000017267) ENSCARG00000017277 armc7 (ENSCARG00000017282) ndel1a (ENSCARG00000017295) itgb3b (ENSCARG00000017332) SYNPO2L (ENSCARG00000017759) myoz1b (ENSCARG00000017768) USP54 (ENSCARG00000017787) ldb3b (ENSCARG00000017892) bmpr1ab (ENSCARG00000018006) Cyprininae_a ANCESTRAL SPECIES 18 ENSGT00940000166248.a.b ENSGT00390000016335.h.j ENSGT00950000183098.a.b.a ENSGT00390000017856.b.a ENSGT00940000159503.j ENSGT00940000158354.c.a.b ENSGT00940000158354.c.a.a.a ENSGT00940000165065.b.b ENSGT00940000161529.v.b ENSGT00940000165637.d ENSGT00940000157457.c ENSGT00940000161032.e ENSGT00950000182832.A.g ENSGT00390000018292.c.b ENSGT00390000014526.d ENSGT00950000183208.B.f.a.d ##22 ENSGT00950000182860.a.a.b.a.a.a.a.b ##27 ENSGT00390000014852.a.p ENSGT00940000158336.bb ENSGT00940000159666.c.b ENSGT00940000166090.d ENSGT00390000016682.h ENSGT00940000161826.C.t ENSGT00940000156830.a.c ENSGT00940000164193 ENSGT00390000000111.a.n.c ENSGT01090000259987.b.b.a.a.a.b.b ENSGT00950000183054.b.c.d ENSGT00950000183027.a.b.c.b.c ENSGT00940000155571.B.h ENSGT01100000263502.B.a.a.d.a.b.a Common carp reference MODERN SPECIES 25 ENSCCRG00000064812 tmem106a (ENSCCRG00000023144) nbr1a (ENSCCRG00000064272) psme3 (ENSCCRG00000061279) skap1 (ENSCCRG00000026624) hoxb5b (ENSCCRG00000067370) hoxb6b (ENSCCRG00000071784) hoxb1b (ENSCCRG00000066675) hoxb8b (ENSCCRG00000080068) ttll6 (ENSCCRG00000026591) ENSCCRG00000056857 ENSCCRG00000026465 chmp2a (ENSCCRG00000026391) ENSCCRG00000066792 znf438 (ENSCCRG00000026554) zeb1b (ENSCCRG00000056266) ##22 arhgap12b (ENSCCRG00000076841) ##27 hexdc (ENSCCRG00000001474) ENSCCRG00000051213 ENSCCRG00000079073 ENSCCRG00000051210 chad (ENSCCRG00000073446) acsf2 (ENSCCRG00000022316) itgb3b (ENSCCRG00000048051) SYNPO2L (ENSCCRG00000060038) myoz1b (ENSCCRG00000048017) USP54 (ENSCCRG00000025421) opn4b (ENSCCRG00000047457) ldb3b (ENSCCRG00000047452) bmpr1ab (ENSCCRG00000081366) ENSCCRG00000046633 Golden-line barbel MODERN SPECIES 456 arl4d (ENSSGRG00000009484) tmem106a (ENSSGRG00000009477) nbr1a (ENSSGRG00000009466) psme3 (ENSSGRG00000009317) skap1 (ENSSGRG00000009316) hoxb1b (ENSSGRG00000009315) hoxb5b (ENSSGRG00000009314) hoxb6b (ENSSGRG00000009313) hoxb8b (ENSSGRG00000009312) ttll6 (ENSSGRG00000009311) ENSSGRG00000009308 ENSSGRG00000009293 chmp2a (ENSSGRG00000009273) ENSSGRG00000009269 znf438 (ENSSGRG00000009266) zeb1b (ENSSGRG00000009263) ##22 arhgap12b (ENSSGRG00000008245) ##27 hexdc (ENSSGRG00000008223) kctd2 (ENSSGRG00000008222) SLC16A5 (ENSSGRG00000008220) ENSSGRG00000008211 ENSSGRG00000008207 chad (ENSSGRG00000008200) acsf2 (ENSSGRG00000008188) armc7 (ENSSGRG00000008186) ndel1a (ENSSGRG00000008124) itgb3b (ENSSGRG00000007947) SYNPO2L (ENSSGRG00000007916) myoz1b (ENSSGRG00000007913) ENSSGRG00000007912 opn4b (ENSSGRG00000007762) Zebrafish MODERN SPECIES 3 ENSDARG00000096637 tmem106a (ENSDARG00000045075) nbr1a (ENSDARG00000077297) psme3 (ENSDARG00000012234) skap1 (ENSDARG00000001498) hoxb1b (ENSDARG00000054033) hoxb5b (ENSDARG00000054030) hoxb6b (ENSDARG00000026513) hoxb8b (ENSDARG00000054025) ttll6 (ENSDARG00000054023) ENSDARG00000005236 ENSDARG00000074688 chmp2a (ENSDARG00000053979) ENSDARG00000090223 znf438 (ENSDARG00000061311) zeb1b (ENSDARG00000013207) ##22 arhgap12b (ENSDARG00000026482) ##27 hexdc (ENSDARG00000061216) ENSDARG00000096782 kctd2 (ENSDARG00000025875) SLC16A5 (ENSDARG00000030472) ENSDARG00000033446 ENSDARG00000079457 chad (ENSDARG00000045071) acsf2 (ENSDARG00000061201) armc7 (ENSDARG00000061197) ENSDARG00000096808 ndel1a (ENSDARG00000010953) itgb3b (ENSDARG00000045070) SYNPO2L (ENSDARG00000078696) myoz1b (ENSDARG00000071445) Clupeocephala ANCESTRAL SPECIES 334 ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000167541 ENSGT01030000234556.a.b.b ENSGT00940000159936 ENSGT00390000000566 ENSGT00940000159779 ENSGT00940000155795.e ENSGT00940000159520.h ENSGT00950000183208.B.f.b ##22 ENSGT00950000182860.a.a.b.a.a ##27 Euteleosteomorpha ANCESTRAL SPECIES 280 ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000167541 ENSGT01030000234556.a.b.b ENSGT00940000159936 ENSGT00390000000566 ENSGT00940000159779 ENSGT00940000155795.e ENSGT00940000159520.h.f ENSGT00950000183208.B.f.b ##22 ENSGT00950000182860.a.a.b.a.a ##27 Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES 43 ENSGT00940000156760.e.a ENSGT00950000183116.b.a.a.a ENSGT00940000160283.g.a.b ENSGT00950000182897.B.a.a.d ENSGT00940000155066.e.b ENSGT00940000166397 ENSGT00970000193372.b.a.a.a.a ENSGT00390000010895.b ENSGT01080000257365.b.a.b.b ENSGT01030000234556.a.b.b ENSGT00940000159936 ENSGT00390000000566 ENSGT00940000159779 ENSGT00940000155795.e ENSGT00940000159520.h.f ENSGT00950000183208.B.f.b.a ##22 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000154801.q.a ENSGT01030000234815 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 111 ENSGT00940000154446.b.a.a.b.b ENSGT00990000203615.b.a.a.a.a.g.b.b ENSGT00940000155795.e.b ENSGT00940000159779.e.a ENSGT00390000000566.cb ENSGT00940000159936.c ENSGT01030000234556.a.b.b.a ENSGT00940000157783.j ENSGT00940000163212.A ENSGT00390000003680.a.a.a.a ENSGT01080000257365.b.a.b.b.b ENSGT00950000183073.a.a.a.gc ENSGT00940000166891.b.a ENSGT00940000154653.fb.a.a ENSGT00950000183208.B.f.b.b ##22 ENSGT00950000183208.B.f.b.a.a ##22 ENSGT00950000182860.a.a.b.a.a.d ##27 ENSGT00950000182860.a.a.b.b ##27 ENSGT00940000154801.q.a.b ENSGT00390000010895.b.c ENSGT00970000193372.b.a.a.a.a ENSGT00940000166397 ENSGT00940000155066.e.b.d ENSGT00950000182897.B.a.a.d.a ENSGT00940000160283.g.a.b.a ENSGT00940000156760.e.a.b.a ENSGT00460000041648.h ENSGT00940000154345.a.e ENSGT00940000156789 ENSGT00530000063947.B.c ENSGT00390000004940.a.a.a.b Salmoninae_a ANCESTRAL SPECIES 2 ENSGT00940000154446.b.a.a.b.b ENSGT00990000203615.b.a.a.a.a.g.b.b ENSGT00940000155795.e.b ENSGT00940000159779.e.a ENSGT00390000000566.cb ENSGT00940000159936.c ENSGT01030000234556.a.b.b.a ENSGT00940000157783.j ENSGT00940000163212.A ENSGT00390000003680.a.a.a.a ENSGT01080000257365.b.a.b.b.b ENSGT00950000183073.a.a.a.gc ENSGT00940000166891.b.a ENSGT00940000154653.fb.a.a ENSGT00950000183208.B.f.b.b ##22 ENSGT00950000183208.B.f.b.a.a ##22 ENSGT00950000183116.b.a.a.b.a.b.o.b ENSGT00950000182860.a.a.b.a.a.d ##27 ENSGT00940000154801.q.a.b ENSGT00390000010895.b.c ENSGT00970000193372.b.a.a.a.a ENSGT00940000166397 ENSGT00940000155066.e.b.d ENSGT00950000182897.B.a.a.d.a ENSGT00940000155066.e.b.c.a.b ENSGT00950000182897.B.a.a.d.b.a ENSGT00940000160283.g.a.b.a ENSGT00940000156760.e.a.b.a ENSGT00460000041648.h ENSGT00940000154345.a.e ENSGT00940000156789 Salmo ANCESTRAL SPECIES 5 ENSGT00940000156073.c.a.b.d ENSGT00940000154446.b.a.a.b.b ENSGT00990000203615.b.a.a.a.a.g.b.b ENSGT00940000155795.e.b ENSGT00940000159779.e.a ENSGT00390000000566.cb ENSGT00940000159936.c ENSGT01030000234556.a.b.b.a ENSGT00940000163212.A ENSGT00390000003680.a.a.a.a ENSGT01080000257365.b.a.b.b.b ENSGT00950000183073.a.a.a.gc ENSGT00940000166891.b.a ENSGT00940000154653.fb.a.a ENSGT00950000183208.B.f.b.b ##22 ENSGT00950000183208.B.f.b.a.a ##22 ENSGT00950000183116.b.a.a.b.a.b.o.b ENSGT00950000182860.a.a.b.a.a.d ##27 ENSGT00940000154801.q.a.b ENSGT00390000010895.b.c ENSGT00970000193372.b.a.a.a.a ENSGT00940000166397 ENSGT00940000155066.e.b.d ENSGT00950000182897.B.a.a.d.a ENSGT00940000160283.g.a.b.a ENSGT00940000156760.e.a.b.a ENSGT00460000041648.h ENSGT00940000154345.a.e ENSGT00940000156789 ENSGT00530000063947.B.c ENSGT00940000157930.c River trout MODERN SPECIES 24 ENSSTUG00000010065 KCNJ10 (ENSSTUG00000010077) KCNJ10 (ENSSTUG00000010093) kirrel1b (ENSSTUG00000010119) cadm3 (ENSSTUG00000010238) sdhc (ENSSTUG00000010455) atp1a2a (ENSSTUG00000010539) mpz (ENSSTUG00000012518) ENSSTUG00000012573 PIP4P1 (ENSSTUG00000012588) KCNJ9 (ENSSTUG00000012603) eif3f (ENSSTUG00000012623) ENSSTUG00000012841 SVIL (ENSSTUG00000012955) ENSSTUG00000014528 ##22 ZEB1 (ENSSTUG00000014535) ##22 ENSSTUG00000014541 ARHGAP12 (ENSSTUG00000014574) ##27 KIF5B (ENSSTUG00000014939) ap1s3b (ENSSTUG00000015283) scg2b (ENSSTUG00000015299) ENSSTUG00000015306 CUL3 (ENSSTUG00000015333) mbnl1 (ENSSTUG00000015597) rap2b (ENSSTUG00000015639) ENSSTUG00000015653 mterf4 (ENSSTUG00000015677) klhl24a (ENSSTUG00000015697) ENSSTUG00000015718 ENSSTUG00000015772 ENSSTUG00000015783 Atlantic salmon MODERN SPECIES 22 ENSSSAG00000008079 ENSSSAG00000008027 ENSSSAG00000008002 kirrel1b (ENSSSAG00000007375) ENSSSAG00000107492 ENSSSAG00000111806 cadm3 (ENSSSAG00000081635) ENSSSAG00000088262 sdhc (ENSSSAG00000081633) atp1a2a (ENSSSAG00000081598) ENSSSAG00000081557 ENSSSAG00000081554 ENSSSAG00000081552 ENSSSAG00000081550 ENSSSAG00000081469 ZEB1 (ENSSSAG00000049587) ##22 ENSSSAG00000049771 ##27 KIF5B (ENSSSAG00000058578) scg2 (ENSSSAG00000065261) ap1s3 (ENSSSAG00000092571) ENSSSAG00000065304 ENSSSAG00000065332 mbnl1 (ENSSSAG00000065915) ENSSSAG00000086486 ENSSSAG00000110040 ENSSSAG00000104111 ENSSSAG00000094934 ENSSSAG00000091350 mterf4 (ENSSSAG00000066074) klhl24a (ENSSSAG00000066077) ENSSSAG00000066095 Oncorhynchus ANCESTRAL SPECIES 11 ENSGT00940000156073.c.a.b.d ENSGT00940000154446.b.a.a.b.b ENSGT00990000203615.b.a.a.a.a.g.b.b ENSGT00940000155795.e.b ENSGT00940000159779.e.a ENSGT00390000000566.cb ENSGT00940000159936.c ENSGT01030000234556.a.b.b.a ENSGT00940000157783.j ENSGT00940000163212.A ENSGT00390000003680.a.a.a.a ENSGT01080000257365.b.a.b.b.b ENSGT00950000183073.a.a.a.gc ENSGT00940000166891.b.a ENSGT00940000154653.fb.a.a ENSGT00950000183208.B.f.b.a.a ##22 ENSGT00950000183116.b.a.a.b.a.b.o.b ENSGT00950000182860.a.a.b.a.a.d ##27 ENSGT00940000154801.q.a.b ENSGT00390000010895.b.c ENSGT00970000193372.b.a.a.a.a ENSGT00940000166397 ENSGT00940000155066.e.b.d ENSGT00950000182897.B.a.a.d.b.a ENSGT00940000160283.g.a.b.a ENSGT00940000156760.e.a.b.a ENSGT00940000154345.a.e ENSGT00940000156789 ENSGT00530000063947.B.c ENSGT00390000004940.a.a.a.b ENSGT00390000012141.a.e Rainbow trout MODERN SPECIES 20 ENSOMYG00000074730 ENSOMYG00000065412 cadm3 (ENSOMYG00000073423) ENSOMYG00000042771 sdhc (ENSOMYG00000042774) atp1a2a (ENSOMYG00000042865) mpz (ENSOMYG00000043249) ENSOMYG00000043259 ENSOMYG00000043276 ENSOMYG00000043298 ENSOMYG00000043341 ENSOMYG00000050987 ENSOMYG00000043884 ENSOMYG00000059840 ENSOMYG00000060144 ##22 ZEB1 (ENSOMYG00000045487) ##22 ENSOMYG00000045532 ##27 KIF5B (ENSOMYG00000045807) scg2b (ENSOMYG00000045942) ap1s3b (ENSOMYG00000043144) ENSOMYG00000046104 ENSOMYG00000045966 ENSOMYG00000048472 mbnl1 (ENSOMYG00000046151) ENSOMYG00000053509 ENSOMYG00000046162 ENSOMYG00000046189 ENSOMYG00000046223 klhl24a (ENSOMYG00000046230) ENSOMYG00000046248 ENSOMYG00000046271 Oncorhynchus_a ANCESTRAL SPECIES 24 ENSGT00940000156073.c.a.b.d ENSGT00940000154446.b.a.a.b.b ENSGT00990000203615.b.a.a.a.a.g.b.b ENSGT00940000155795.e.b ENSGT00940000159779.e.a ENSGT00390000000566.cb ENSGT00940000159936.c ENSGT01030000234556.a.b.b.a ENSGT00940000157783.j ENSGT00940000163212.A ENSGT00390000003680.a.a.a.a ENSGT01080000257365.b.a.b.b.b ENSGT00950000183073.a.a.a.gc ENSGT00940000166891.b.a ENSGT00940000154653.fb.a.a ENSGT00950000183208.B.f.b.a.a ##22 ENSGT00950000183116.b.a.a.b.a.b.o.b ENSGT00950000182860.a.a.b.a.a.d ##27 ENSGT00940000154801.q.a.b ENSGT00390000010895.b.c ENSGT00970000193372.b.a.a.a.a ENSGT00940000166397 ENSGT00940000155066.e.b.d ENSGT00950000182897.B.a.a.d.b.a ENSGT00940000160283.g.a.b.a ENSGT00940000156760.e.a.b.a ENSGT00940000154345.a.e ENSGT00940000156789 ENSGT00530000063947.B.c ENSGT00390000004940.a.a.a.b ENSGT00390000012141.a.e Chinook salmon MODERN SPECIES 20 ENSOTSG00005009950 KCNJ10 (ENSOTSG00005009949) kirrel1b (ENSOTSG00005009843) cadm3 (ENSOTSG00005009837) sdhc (ENSOTSG00005009834) ENSOTSG00005009832 atp1a2a (ENSOTSG00005007964) mpz (ENSOTSG00005007949) lig1 (ENSOTSG00005007948) ENSOTSG00005007947 PIP4P1 (ENSOTSG00005007946) KCNJ9 (ENSOTSG00005007945) eif3f (ENSOTSG00005007125) ENSOTSG00005007115 SVIL (ENSOTSG00005004104) ZEB1 (ENSOTSG00005004054) ##22 cbln10 (ENSOTSG00005004053) ARHGAP12 (ENSOTSG00005003891) ##27 KIF5B (ENSOTSG00005003639) scg2b (ENSOTSG00005003627) ap1s3b (ENSOTSG00005003624) ENSOTSG00005003610 CUL3 (ENSOTSG00005003284) mbnl1 (ENSOTSG00005003273) rap2b (ENSOTSG00005003270) ENSOTSG00005003251 klhl24a (ENSOTSG00005003243) ENSOTSG00005003234 ENSOTSG00005003228 camk2n1a (ENSOTSG00005003227) mul1a (ENSOTSG00005003226) Coho salmon MODERN SPECIES 19 KCNJ10 (ENSOKIG00005045421) kirrel1b (ENSOKIG00005045019) ENSOKIG00005044975 cadm3 (ENSOKIG00005044936) sdhc (ENSOKIG00005044903) ENSOKIG00005044898 atp1a2a (ENSOKIG00005044610) mpz (ENSOKIG00005044559) lig1 (ENSOKIG00005044511) ENSOKIG00005044487 PIP4P1 (ENSOKIG00005044474) KCNJ9 (ENSOKIG00005044463) EIF3F (ENSOKIG00005044410) ENSOKIG00005044393 SVIL (ENSOKIG00005042167) ZEB1 (ENSOKIG00005041846) ##22 ENSOKIG00005041837 ARHGAP12 (ENSOKIG00005040912) ##27 KIF5B (ENSOKIG00005040418) ap1s3b (ENSOKIG00005040288) ENSOKIG00005040145 CUL3 (ENSOKIG00005039870) ENSOKIG00005039852 mbnl1 (ENSOKIG00005039811) RAP2B (ENSOKIG00005039798) ENSOKIG00005039719 klhl24a (ENSOKIG00005039682) ENSOKIG00005039618 ENSOKIG00005039579 camk2n1a (ENSOKIG00005039555) mul1a (ENSOKIG00005039539) Huchen MODERN SPECIES 4690 ZEB1 (ENSHHUG00000046343) ##22 ENSHHUG00000046345 ARHGAP12 (ENSHHUG00000046349) ##27 Salmoninae ANCESTRAL SPECIES 1166 ENSGT00940000159520.h.f.b ENSGT00950000183208.B.f.b.a.b ##22 ENSGT00950000182860.a.a.b.a.a.c ##27 ENSGT00940000154801.q.a.a Salmoninae_a ANCESTRAL SPECIES 51 ENSGT00950000182991.A.b.b.a ENSGT00940000159520.h.f.a.b ENSGT00940000155795.e.a ENSGT00940000159779.e.b ENSGT00390000000566.bb ENSGT00940000159936.d ENSGT01030000234556.a.b.b.b ENSGT00940000157783.i ENSGT00390000003680.a.a.a.b ENSGT00390000015219 ENSGT01080000257365.b.a.b.b.a ENSGT00950000183073.a.a.a.fc ENSGT00940000166891.b.b ENSGT00940000154653.fb.a.b ENSGT00940000159520.h.f.b ENSGT00950000183208.B.f.b.a.b ##22 ENSGT00940000163520.A.a.a.a.a.a.a.h.b.a ENSGT00950000183116.b.a.a.b.a.b.o.a ENSGT00950000182860.a.a.b.a.a.c ##27 ENSGT00940000154801.q.a.a ENSGT00390000010895.b.d ENSGT00970000193372.b.a.a.a.b ENSGT00940000155066.e.b.c.b ENSGT00950000182897.B.a.a.d.b.b ENSGT00940000160283.g.a.b.b ENSGT00950000183116.b.a.a.a ENSGT00940000156760.e.a.b.b ENSGT00940000159035 ENSGT00460000041648.g ENSGT01030000235043 ENSGT00940000154345.a.f Salmo ANCESTRAL SPECIES 21 ENSGT00990000205031.a.a.a ENSGT00990000205031.a.b.a ENSGT00940000155795.e.a ENSGT00940000159779.e.b ENSGT00390000000566.bb ENSGT00940000159936.d ENSGT01030000234556.a.b.b.b ENSGT00940000157783.i ENSGT00390000003680.a.a.a.b ENSGT00390000015219 ENSGT01080000257365.b.a.b.b.a ENSGT00950000183073.a.a.a.fc ENSGT00940000166891.b.b ENSGT00940000154653.fb.a.b ENSGT00940000159520.h.f.b ENSGT00950000183208.B.f.b.a.b ##22 ENSGT00940000163520.A.a.a.a.a.a.a.h.b.a ENSGT00950000183116.b.a.a.b.a.b.o.a ENSGT00950000182860.a.a.b.a.a.c ##27 ENSGT00940000154801.q.a.a ENSGT00390000010895.b.d ENSGT00970000193372.b.a.a.a.b ENSGT00940000155066.e.b.c.b ENSGT00950000182897.B.a.a.d.b.b ENSGT00940000160283.g.a.b.b ENSGT01060000248788.a ENSGT00940000156760.e.a.b.b ENSGT00940000159035 ENSGT00460000041648.g ENSGT01030000235043 ENSGT00980000199221 River trout MODERN SPECIES 13 ENSSTUG00000037951 kirrel1b (ENSSTUG00000037169) ENSSTUG00000037106 cadm3 (ENSSTUG00000036893) sdhc (ENSSTUG00000036827) atp1a2a (ENSSTUG00000033021) ENSSTUG00000032889 lig1 (ENSSTUG00000032567) PIP4P1 (ENSSTUG00000032535) dnaaf6 (ENSSTUG00000032505) KCNJ9 (ENSSTUG00000032488) eif3f (ENSSTUG00000032423) ENSSTUG00000032389 SVIL (ENSSTUG00000031373) ENSSTUG00000031317 ZEB1 (ENSSTUG00000031287) ##22 ENSSTUG00000031278 ENSSTUG00000031257 cbln10 (ENSSTUG00000031229) ENSSTUG00000031224 ENSSTUG00000029077 ##27 KIF5B (ENSSTUG00000028920) scg2b (ENSSTUG00000028905) ap1s3b (ENSSTUG00000028882) CUL3 (ENSSTUG00000028466) mbnl1 (ENSSTUG00000028412) rap2b (ENSSTUG00000028404) ENSSTUG00000028398 ENSSTUG00000028394 ENSSTUG00000028371 ENSSTUG00000028349 Atlantic salmon MODERN SPECIES 5 ENSSSAG00000082364 ENSSSAG00000039702 ENSSSAG00000113639 kirrel1b (ENSSSAG00000039360) cadm3 (ENSSSAG00000119198) sdhc (ENSSSAG00000081309) atp1a2a (ENSSSAG00000081258) myp0 (ENSSSAG00000081246) lig1 (ENSSSAG00000081183) ENSSSAG00000099958 ENSSSAG00000081118 ENSSSAG00000081109 ENSSSAG00000081130 ENSSSAG00000081036 ENSSSAG00000081012 ZEB1 (ENSSSAG00000081007) ##22 ENSSSAG00000097154 ENSSSAG00000115176 ENSSSAG00000081004 ENSSSAG00000082475 ENSSSAG00000080875 ENSSSAG00000080933 ##27 KIF5B (ENSSSAG00000065364) ENSSSAG00000065850 ENSSSAG00000065269 ENSSSAG00000065870 ENSSSAG00000086506 ENSSSAG00000104590 ENSSSAG00000112219 ENSSSAG00000104297 ENSSSAG00000121655 Oncorhynchus ANCESTRAL SPECIES 46 ENSGT01100000263556.a.a.q.c.a ENSGT00950000182991.A.b.b.a ENSGT00940000159520.h.f.a.b ENSGT00940000155795.e.a ENSGT00940000159779.e.b ENSGT00390000000566.bb ENSGT00940000159936.d ENSGT01030000234556.a.b.b.b ENSGT00940000157783.i ENSGT00390000003680.a.a.a.b ENSGT00390000015219 ENSGT01080000257365.b.a.b.b.a ENSGT00950000183073.a.a.a.fc ENSGT00940000166891.b.b ENSGT00940000154653.fb.a.b ENSGT00950000183208.B.f.b.a.b ##22 ENSGT00950000183116.b.a.a.b.a.b.o.a ENSGT00950000182860.a.a.b.a.a.c ##27 ENSGT00940000154801.q.a.a ENSGT00390000010895.b.d ENSGT00970000193372.b.a.a.a.b ENSGT00950000182897.B.a.a.d.b.b ENSGT00940000160283.g.a.b.b ENSGT00950000183116.b.a.a.a ENSGT00940000159035 ENSGT00460000041648.g ENSGT01030000235043 ENSGT00940000154345.a.f ENSGT00530000063947.B.d ENSGT00940000157930 ENSGT00940000164140.c.a Oncorhynchus_a ANCESTRAL SPECIES 56 ENSGT00990000205031.a.b.b.b ENSGT01030000234540.A.a.a.cb ENSGT00940000159520.h.f.a.a ENSGT00940000155795.e.a ENSGT00940000159779.e.b ENSGT00390000000566.bb ENSGT00940000159936.d ENSGT01030000234556.a.b.b.b ENSGT00940000157783.i ENSGT00390000003680.a.a.a.b ENSGT00390000015219 ENSGT01080000257365.b.a.b.b.a ENSGT00950000183073.a.a.a.fc ENSGT00940000166891.b.b ENSGT00940000154653.fb.a.b ENSGT00950000183208.B.f.b.a.b ##22 ENSGT00950000183116.b.a.a.b.a.b.o.a ENSGT00950000182860.a.a.b.a.a.c ##27 ENSGT00940000154801.q.a.a ENSGT00390000010895.b.d ENSGT00970000193372.b.a.a.a.b ENSGT00950000182897.B.a.a.d.b.b ENSGT00940000160283.g.a.b.b ENSGT00950000183116.b.a.a.a ENSGT00940000159035 ENSGT00460000041648.g ENSGT01030000235043 ENSGT00940000154345.a.f ENSGT00530000063947.B.d ENSGT00940000157930 ENSGT00940000164140.c.a Chinook salmon MODERN SPECIES 1 ENSOTSG00005033589 slc1a7a (ENSOTSG00005033588) scp2a (ENSOTSG00005033565) czib (ENSOTSG00005033561) uck2b (ENSOTSG00005033558) ENSOTSG00005033557 ENSOTSG00005033556 ENSOTSG00005033555 ENSOTSG00005033553 ENSOTSG00005033533 ENSOTSG00005033530 KIRREL1 (ENSOTSG00005033514) ENSOTSG00005033512 ENSOTSG00005033511 SVIL (ENSOTSG00005032451) ZEB1 (ENSOTSG00005032449) ##22 cbln10 (ENSOTSG00005032448) ENSOTSG00005032224 ##27 KIF5B (ENSOTSG00005032102) camk2n1a (ENSOTSG00005032101) mul1a (ENSOTSG00005032100) ENSOTSG00005032099 alg3 (ENSOTSG00005032098) ENSOTSG00005032096 chrng (ENSOTSG00005031652) ENSOTSG00005031650 ENSOTSG00005031649 ccl20a.3 (ENSOTSG00005031648) ccl20a.3 (ENSOTSG00005031647) ENSOTSG00005031646 WDR47 (ENSOTSG00005031580) Coho salmon MODERN SPECIES 23 ENSOKIG00005033886 kirrel1b (ENSOKIG00005033773) cadm3 (ENSOKIG00005033705) sdhc (ENSOKIG00005033587) atp1a2a (ENSOKIG00005033353) mpz (ENSOKIG00005033321) lig1 (ENSOKIG00005032269) PIP4P1 (ENSOKIG00005032195) dnaaf6 (ENSOKIG00005032186) eif3f (ENSOKIG00005031863) KCNJ9 (ENSOKIG00005031837) ENSOKIG00005031829 SVIL (ENSOKIG00005029082) ENSOKIG00005028924 ENSOKIG00005028890 ZEB1 (ENSOKIG00005028750) ##22 ENSOKIG00005028724 ENSOKIG00005028290 ##27 KIF5B (ENSOKIG00005028172) scg2b (ENSOKIG00005028159) ap1s3b (ENSOKIG00005028134) ENSOKIG00005028128 CUL3 (ENSOKIG00005027628) ENSOKIG00005027598 ENSOKIG00005027588 mbnl1 (ENSOKIG00005027566) ENSOKIG00005027558 RAP2B (ENSOKIG00005027551) ENSOKIG00005027541 ENSOKIG00005027530 ENSOKIG00005027473 Rainbow trout MODERN SPECIES 29 atp1a2a (ENSOMYG00000028700) ENSOMYG00000065860 ENSOMYG00000061148 mpz (ENSOMYG00000028662) lig1 (ENSOMYG00000053918) ENSOMYG00000028595 dnaaf6 (ENSOMYG00000028583) ENSOMYG00000028578 ENSOMYG00000028459 ENSOMYG00000028380 ENSOMYG00000028190 ENSOMYG00000073670 ENSOMYG00000028004 ENSOMYG00000071495 ENSOMYG00000067862 ZEB1 (ENSOMYG00000027956) ##22 ENSOMYG00000027946 ENSOMYG00000060065 ENSOMYG00000027912 ##27 KIF5B (ENSOMYG00000027759) ENSOMYG00000002641 ENSOMYG00000002622 ENSOMYG00000059348 ENSOMYG00000002514 ENSOMYG00000027627 ENSOMYG00000069219 ENSOMYG00000054781 ENSOMYG00000052231 ENSOMYG00000027596 ENSOMYG00000070150 ENSOMYG00000027497 Huchen MODERN SPECIES 3306 ZEB1 (ENSHHUG00000011516) ##22 ENSHHUG00000011534 ENSHHUG00000011539 ##27 Northern pike MODERN SPECIES 2 ENSELUG00000012587 ENSELUG00000012547 kirrel1b (ENSELUG00000012509) cadm3 (ENSELUG00000012396) sdhc (ENSELUG00000012276) atp1a2a (ENSELUG00000001123) mpz (ENSELUG00000012164) lig1 (ENSELUG00000012136) ENSELUG00000012069 PIP4P1 (ENSELUG00000012051) dnaaf6 (ENSELUG00000012022) KCNJ9 (ENSELUG00000012004) eif3f (ENSELUG00000011987) ENSELUG00000011974 SVIL (ENSELUG00000011945) ZEB1 (ENSELUG00000011887) ##22 arhgap12b (ENSELUG00000011833) ##27 KIF5B (ENSELUG00000011732) ENSELUG00000025693 scg2b (ENSELUG00000000421) ap1s3b (ENSELUG00000011670) ENSELUG00000011649 CUL3 (ENSELUG00000011610) mbnl1 (ENSELUG00000011545) rap2b (ENSELUG00000001261) ENSELUG00000011472 ENSELUG00000011451 ENSELUG00000011381 mterf4 (ENSELUG00000030741) ENSELUG00000000404 ENSELUG00000031285 Protacanthopterygii ANCESTRAL SPECIES ENSGT00950000183208.B.f.b.b ##22 Salmoninae ANCESTRAL SPECIES 111 ENSGT00940000156073.c.a.b.d ENSGT00940000154446.b.a.a.b.b ENSGT00990000203615.b.a.a.a.a.g.b.b ENSGT00940000155795.e.b ENSGT00940000159779.e.a ENSGT00390000000566.cb ENSGT00940000159936.c ENSGT01030000234556.a.b.b.a ENSGT00940000157783.j ENSGT00940000163212.A ENSGT00390000003680.a.a.a.a ENSGT01080000257365.b.a.b.b.b ENSGT00950000183073.a.a.a.gc ENSGT00940000166891.b.a ENSGT00940000154653.fb.a.a ENSGT00950000183208.B.f.b.b ##22 ENSGT00950000183208.B.f.b.a.a ##22 ENSGT00950000182860.a.a.b.a.a.d ##27 ENSGT00950000182860.a.a.b.b ##27 ENSGT00940000154801.q.a.b ENSGT00390000010895.b.c ENSGT00970000193372.b.a.a.a.a ENSGT00940000166397 ENSGT00940000155066.e.b.d ENSGT00950000182897.B.a.a.d.a ENSGT00940000160283.g.a.b.a ENSGT00940000156760.e.a.b.a ENSGT00460000041648.h ENSGT00940000154345.a.e ENSGT00940000156789 ENSGT00530000063947.B.c Salmoninae_a ANCESTRAL SPECIES 2 ENSGT00940000156073.c.a.b.d ENSGT00940000154446.b.a.a.b.b ENSGT00990000203615.b.a.a.a.a.g.b.b ENSGT00940000155795.e.b ENSGT00940000159779.e.a ENSGT00390000000566.cb ENSGT00940000159936.c ENSGT01030000234556.a.b.b.a ENSGT00940000157783.j ENSGT00940000163212.A ENSGT00390000003680.a.a.a.a ENSGT01080000257365.b.a.b.b.b ENSGT00950000183073.a.a.a.gc ENSGT00940000166891.b.a ENSGT00940000154653.fb.a.a ENSGT00950000183208.B.f.b.b ##22 ENSGT00950000183208.B.f.b.a.a ##22 ENSGT00950000183116.b.a.a.b.a.b.o.b ENSGT00950000182860.a.a.b.a.a.d ##27 ENSGT00940000154801.q.a.b ENSGT00390000010895.b.c ENSGT00970000193372.b.a.a.a.a ENSGT00940000166397 ENSGT00940000155066.e.b.d ENSGT00950000182897.B.a.a.d.a ENSGT00940000155066.e.b.c.a.b ENSGT00950000182897.B.a.a.d.b.a ENSGT00940000160283.g.a.b.a ENSGT00940000156760.e.a.b.a ENSGT00460000041648.h ENSGT00940000154345.a.e Salmo ANCESTRAL SPECIES 5 ENSGT00940000161304.a.b.b.a ENSGT00940000156073.c.a.b.d ENSGT00940000154446.b.a.a.b.b ENSGT00990000203615.b.a.a.a.a.g.b.b ENSGT00940000155795.e.b ENSGT00940000159779.e.a ENSGT00390000000566.cb ENSGT00940000159936.c ENSGT01030000234556.a.b.b.a ENSGT00940000163212.A ENSGT00390000003680.a.a.a.a ENSGT01080000257365.b.a.b.b.b ENSGT00950000183073.a.a.a.gc ENSGT00940000166891.b.a ENSGT00940000154653.fb.a.a ENSGT00950000183208.B.f.b.b ##22 ENSGT00950000183208.B.f.b.a.a ##22 ENSGT00950000183116.b.a.a.b.a.b.o.b ENSGT00950000182860.a.a.b.a.a.d ##27 ENSGT00940000154801.q.a.b ENSGT00390000010895.b.c ENSGT00970000193372.b.a.a.a.a ENSGT00940000166397 ENSGT00940000155066.e.b.d ENSGT00950000182897.B.a.a.d.a ENSGT00940000160283.g.a.b.a ENSGT00940000156760.e.a.b.a ENSGT00460000041648.h ENSGT00940000154345.a.e ENSGT00940000156789 ENSGT00530000063947.B.c River trout MODERN SPECIES 24 slc1a7a (ENSSTUG00000010011) ENSSTUG00000010065 KCNJ10 (ENSSTUG00000010077) KCNJ10 (ENSSTUG00000010093) kirrel1b (ENSSTUG00000010119) cadm3 (ENSSTUG00000010238) sdhc (ENSSTUG00000010455) atp1a2a (ENSSTUG00000010539) mpz (ENSSTUG00000012518) ENSSTUG00000012573 PIP4P1 (ENSSTUG00000012588) KCNJ9 (ENSSTUG00000012603) eif3f (ENSSTUG00000012623) ENSSTUG00000012841 SVIL (ENSSTUG00000012955) ENSSTUG00000014528 ##22 ZEB1 (ENSSTUG00000014535) ##22 ENSSTUG00000014541 ARHGAP12 (ENSSTUG00000014574) ##27 KIF5B (ENSSTUG00000014939) ap1s3b (ENSSTUG00000015283) scg2b (ENSSTUG00000015299) ENSSTUG00000015306 CUL3 (ENSSTUG00000015333) mbnl1 (ENSSTUG00000015597) rap2b (ENSSTUG00000015639) ENSSTUG00000015653 mterf4 (ENSSTUG00000015677) klhl24a (ENSSTUG00000015697) ENSSTUG00000015718 ENSSTUG00000015772 Oncorhynchus ANCESTRAL SPECIES ENSGT00950000183208.B.f.b.b ##22 Rainbow trout MODERN SPECIES 20 kirrel1b (ENSOMYG00000042702) ENSOMYG00000074730 ENSOMYG00000065412 cadm3 (ENSOMYG00000073423) ENSOMYG00000042771 sdhc (ENSOMYG00000042774) atp1a2a (ENSOMYG00000042865) mpz (ENSOMYG00000043249) ENSOMYG00000043259 ENSOMYG00000043276 ENSOMYG00000043298 ENSOMYG00000043341 ENSOMYG00000050987 ENSOMYG00000043884 ENSOMYG00000059840 ENSOMYG00000060144 ##22 ZEB1 (ENSOMYG00000045487) ##22 ENSOMYG00000045532 ##27 KIF5B (ENSOMYG00000045807) scg2b (ENSOMYG00000045942) ap1s3b (ENSOMYG00000043144) ENSOMYG00000046104 ENSOMYG00000045966 ENSOMYG00000048472 mbnl1 (ENSOMYG00000046151) ENSOMYG00000053509 ENSOMYG00000046162 ENSOMYG00000046189 ENSOMYG00000046223 klhl24a (ENSOMYG00000046230) ENSOMYG00000046248 Acanthomorphata ANCESTRAL SPECIES 576 ENSGT01010000222336.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 Cod MODERN SPECIES 21 ENSGMOG00000022448 ENSGMOG00000025397 ENSGMOG00000024875 ENSGMOG00000013289 ENSGMOG00000008152 ENSGMOG00000000536 ##27 ENSGMOG00000013992 ENSGMOG00000014041 ENSGMOG00000014082 ENSGMOG00000002104 ENSGMOG00000014218 ENSGMOG00000016516 ENSGMOG00000024488 ENSGMOG00000014109 ENSGMOG00000035897 ENSGMOG00000023916 ##22 ENSGMOG00000003546 ENSGMOG00000026904 ENSGMOG00000003659 ENSGMOG00000027495 dnaaf6 (ENSGMOG00000003680) ENSGMOG00000025549 ENSGMOG00000036143 lig1 (ENSGMOG00000003715) mpz (ENSGMOG00000003779) ENSGMOG00000006554 sdhc (ENSGMOG00000006584) kirrel1b (ENSGMOG00000011304) ENSGMOG00000032116 ENSGMOG00000026090 ENSGMOG00000029385 Euacanthomorphacea ANCESTRAL SPECIES 317 ENSGT01010000222336.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 Pinecone sodierfish MODERN SPECIES 8 kirrel1b (ENSMMDG00005013816) cadm3 (ENSMMDG00005013832) sdhc (ENSMMDG00005014077) atp1a2a (ENSMMDG00005014111) mpz (ENSMMDG00005015287) ENSMMDG00005015364 ENSMMDG00005017362 PIP4P1 (ENSMMDG00005017364) dnaaf6 (ENSMMDG00005017365) ENSMMDG00005017367 eif3f (ENSMMDG00005017368) KCNJ9 (ENSMMDG00005017373) ENSMMDG00005017375 SVIL (ENSMMDG00005017378) ENSMMDG00005017380 ZEB1 (ENSMMDG00005017391) ##22 ENSMMDG00005017505 ENSMMDG00005017971 KLHL10 (ENSMMDG00005017975) ENSMMDG00005017994 ENSMMDG00005017995 ENSMMDG00005017996 ENSMMDG00005018000 ENSMMDG00005018002 ENSMMDG00005018004 ENSMMDG00005018006 ENSMMDG00005018008 ENSMMDG00005018009 pold3 (ENSMMDG00005018013) KIF5B (ENSMMDG00005018034) ENSMMDG00005018106 Percomorphaceae ANCESTRAL SPECIES 264 ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 Tiger tail seahorse MODERN SPECIES 423 KLHL10 (ENSHCOG00000012465) KLHL10 (ENSHCOG00000012444) KLHL10 (ENSHCOG00000012420) ENSHCOG00000012378 KCNJ10 (ENSHCOG00000012370) pnp5b (ENSHCOG00000012359) ENSHCOG00000012350 hnrnpc (ENSHCOG00000012333) ENSHCOG00000012323 parp2 (ENSHCOG00000012275) ENSHCOG00000012231 sdr39u1 (ENSHCOG00000012211) ENSHCOG00000012184 ENSHCOG00000012040 ENSHCOG00000012029 ENSHCOG00000012024 ##22 ENSHCOG00000012013 pold3 (ENSHCOG00000011738) KIF5B (ENSHCOG00000011728) ENSHCOG00000011719 arhgap12a (ENSHCOG00000011700) ##27 ENSHCOG00000011657 ENSHCOG00000011627 ITGB1 (ENSHCOG00000011595) ITGB1 (ENSHCOG00000011563) NRP1 (ENSHCOG00000011548) pard3ab (ENSHCOG00000011523) CREM (ENSHCOG00000011453) ENSHCOG00000011433 ENSHCOG00000011421 ENSHCOG00000011411 Percomorphaceae_B ANCESTRAL SPECIES 8 ENSGT00390000018381 ENSGT00940000158085.b.b ENSGT00940000161191.A.a.b ENSGT01090000260098.B.a ENSGT00940000154453.a.b.b.e.b ENSGT00940000156952.a.b ENSGT00940000155408.p ENSGT00950000183214.a.a.a.a ENSGT00940000157169.d ENSGT01090000259987.a.b.d.b.a ENSGT00940000155003.e.b ENSGT00940000166125 ENSGT00730000114275 ENSGT01010000222336.a.a.a.a.a.b.a.b ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b ENSGT00950000182860.a.a.b.a.a ##27 ENSGT01030000234815 ENSGT00940000154801.o.a ENSGT00940000165190.A.a.a ENSGT00940000163239 ENSGT00940000177440 ENSGT00940000166891.b ENSGT01080000257365.b.a.b.b ENSGT00950000183073.a.a.a ENSGT00530000063666.b.db ENSGT00390000015219 ENSGT00390000003680.a.a.a ENSGT00940000163212.A ENSGT00940000157783 Percomorphaceae_C ANCESTRAL SPECIES 53 ENSGT01010000222336.a.a.a.a.a.b.a.b ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000177342.b Eupercaria ANCESTRAL SPECIES 24 ENSGT00940000155795.e ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000177717 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000177342.b ENSGT00730000114275 ENSGT00940000160228.i.b ENSGT00940000163239 ENSGT00940000165190.A.a.b ENSGT00940000165190.A.a.a ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00970000198099 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a Tetraodontidae ANCESTRAL SPECIES 13 ENSGT00940000157841 ENSGT00940000159567.a.a ENSGT00940000157990.a.a ENSGT00940000160062.a ENSGT00390000004964 ENSGT01050000244939.a.a.b.a.a ENSGT00940000160625.q ENSGT00390000016277.b ENSGT00390000003324 ENSGT00950000182977.B.b.a.c.b ENSGT00940000160141.e.a ENSGT00940000157263 ENSGT00940000163957.e.a ENSGT00390000016573.c.b ENSGT00390000000715 ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.o ENSGT00940000163239 ENSGT00940000165190.A.b.a ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.p ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000154453.a.b.b.e.b ENSGT01090000260098.B.a ENSGT00940000161191.A.a.b Fugu MODERN SPECIES 14 ENSTRUG00000017632 carmil3 (ENSTRUG00000017665) rem2 (ENSTRUG00000000259) ENSTRUG00000030657 ENSTRUG00000000297 TGM1 (ENSTRUG00000000379) ENSTRUG00000000440 abhd4 (ENSTRUG00000000521) dad1 (ENSTRUG00000000531) pigr (ENSTRUG00000000549) LRRC24 (ENSTRUG00000023744) slc6a9 (ENSTRUG00000024850) klf17 (ENSTRUG00000000953) rnf220a (ENSTRUG00000000977) tmem53 (ENSTRUG00000023869) ENSTRUG00000001256 ##22 ENSTRUG00000001496 tmem53 (ENSTRUG00000028392) ENSTRUG00000029840 pold3 (ENSTRUG00000001631) ENSTRUG00000030884 ENSTRUG00000002324 ENSTRUG00000033451 ENSTRUG00000026482 ENSTRUG00000030305 KIF5B (ENSTRUG00000007011) ENSTRUG00000023661 arhgap12b (ENSTRUG00000006634) ##27 ENSTRUG00000006543 ENSTRUG00000005894 ENSTRUG00000005603 Tetraodon MODERN SPECIES 6 prmt5 (ENSTNIG00000007948) PSMB11 (ENSTNIG00000001142) psmb5 (ENSTNIG00000007949) CDH24 (ENSTNIG00000007950) carmil3 (ENSTNIG00000007951) ENSTNIG00000007952 TGM1 (ENSTNIG00000007953) ENSTNIG00000007954 abhd4 (ENSTNIG00000007955) dad1 (ENSTNIG00000007956) ENSTNIG00000007957 LRRC24 (ENSTNIG00000007958) slc6a9 (ENSTNIG00000007959) rnf220a (ENSTNIG00000007960) tmem53 (ENSTNIG00000007961) ZEB1 (ENSTNIG00000007962) ##22 ENSTNIG00000007963 pold3 (ENSTNIG00000007964) ENSTNIG00000007965 ENSTNIG00000007966 ENSTNIG00000001558 ENSTNIG00000007967 KIF5B (ENSTNIG00000007968) arhgap12b (ENSTNIG00000007969) ##27 ENSTNIG00000007970 ENSTNIG00000007971 ENSTNIG00000007972 itgb1b.1 (ENSTNIG00000007973) NRP1 (ENSTNIG00000007974) pard3ab (ENSTNIG00000007975) CCNY (ENSTNIG00000007976) Eupecaria_A ANCESTRAL SPECIES 8 ENSGT00940000155795.e ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000177717 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000177342.b ENSGT00730000114275 ENSGT00940000160228.i.b ENSGT00940000163239 ENSGT00940000165190.A.a.b ENSGT00940000165190.A.a.a ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00970000198099 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a Ballan wrasse MODERN SPECIES 171 ENSLBEG00000000068 ZEB1 (ENSLBEG00000000076) ##22 ENSLBEG00000000115 ENSLBEG00000000336 pold3 (ENSLBEG00000000693) KIF5B (ENSLBEG00000000712) ENSLBEG00000000799 arhgap12b (ENSLBEG00000000828) ##27 ENSLBEG00000000883 ENSLBEG00000000918 ENSLBEG00000001265 ENSLBEG00000001326 ITGB1 (ENSLBEG00000001352) ITGB1 (ENSLBEG00000001395) NRP1 (ENSLBEG00000001460) ENSLBEG00000001555 ENSLBEG00000001571 Eupecaria_B ANCESTRAL SPECIES 8 ENSGT00940000155795.e ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000177717 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000177342.b ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT00940000165190.A.a.b ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p Eupecaria_C ANCESTRAL SPECIES 26 ENSGT01030000234540.A.a.a ENSGT00940000155795.e ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000163239 ENSGT00940000165190.A.a.b ENSGT00940000165190.A.a.a ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000154453.a.b.b.e.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 30 ENSGT01010000222685 ENSGT00940000155795.e ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000163239 ENSGT00940000165190.A.a.b ENSGT00940000165190.A.a.a ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000154453.a.b.b.e.b European seabass MODERN SPECIES cadm3 (ENSDLAG00005033644) SDHC (ENSDLAG00005006491) atp1a2a (ENSDLAG00005006548) mpz (ENSDLAG00005027465) lig1 (ENSDLAG00005007329) ENSDLAG00005008805 ENSDLAG00005026490 ENSDLAG00005031915 dnaaf6 (ENSDLAG00005008905) ENSDLAG00005008912 ENSDLAG00005008926 ENSDLAG00005030436 ENSDLAG00005009081 ENSDLAG00005009237 ENSDLAG00005013626 ENSDLAG00005013633 ##22 ENSDLAG00005013663 ENSDLAG00005032022 ENSDLAG00005014090 ENSDLAG00005014113 ENSDLAG00005027605 ENSDLAG00005028916 ENSDLAG00005002793 ENSDLAG00005032758 ENSDLAG00005026404 ENSDLAG00005028335 ENSDLAG00005028337 ENSDLAG00005028552 ENSDLAG00005027646 ENSDLAG00005032292 ENSDLAG00005032646 Large yellow croaker MODERN SPECIES 1 cadm3 (ENSLCRG00005002311) sdhc (ENSLCRG00005002308) atp1a2a (ENSLCRG00005002072) mpz (ENSLCRG00005002012) lig1 (ENSLCRG00005001631) ENSLCRG00005001554 PIP4P1 (ENSLCRG00005001484) dnaaf6 (ENSLCRG00005001468) ENSLCRG00005023567 eif3f (ENSLCRG00005023564) KCNJ9 (ENSLCRG00005023559) ENSLCRG00005023558 SVIL (ENSLCRG00005023545) ENSLCRG00005023540 ENSLCRG00005023538 ZEB1 (ENSLCRG00005023535) ##22 ENSLCRG00005023532 ENSLCRG00005023531 DIP2C (ENSLCRG00005022060) zmynd11 (ENSLCRG00005021943) ENSLCRG00005021939 ENSLCRG00005021936 VIPR2 (ENSLCRG00005021905) ESYT2 (ENSLCRG00005021800) ENSLCRG00005021793 ENSLCRG00005021652 LACTB2 (ENSLCRG00005021648) NCOA2 (ENSLCRG00005021636) PFKP (ENSLCRG00005018399) ENSLCRG00005018316 pitrm1 (ENSLCRG00005017716) Gilthead seabream MODERN SPECIES 13 kirrel1b (ENSSAUG00010009017) cadm3 (ENSSAUG00010008993) SDHC (ENSSAUG00010008991) atp1a2a (ENSSAUG00010007626) mpz (ENSSAUG00010007608) lig1 (ENSSAUG00010007574) ENSSAUG00010007522 PIP4P1 (ENSSAUG00010007517) dnaaf6 (ENSSAUG00010007515) ENSSAUG00010007513 eif3f (ENSSAUG00010007511) KCNJ9 (ENSSAUG00010007508) ENSSAUG00010007507 SVIL (ENSSAUG00010007007) ENSSAUG00010006986 ZEB1 (ENSSAUG00010006978) ##22 ENSSAUG00010006975 uba52 (ENSSAUG00010006967) HOMER3 (ENSSAUG00010006962) upf1 (ENSSAUG00010006947) pgpep1 (ENSSAUG00010006940) jund (ENSSAUG00010006938) RAB3A (ENSSAUG00010006934) ENSSAUG00010006739 pik3r2 (ENSSAUG00010006682) MAST3 (ENSSAUG00010006678) ENSSAUG00010006676 crtc1a (ENSSAUG00010006670) MED26 (ENSSAUG00010006667) ENSSAUG00010006664 rps15 (ENSSAUG00010006634) Perciformes ANCESTRAL SPECIES 5 ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000177717 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000154653 ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000177342.b ENSGT00730000114275 ENSGT00940000160228.i.b ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000154453.a.b.b.e.b Perciformes_a ANCESTRAL SPECIES 17 ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000177717 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000154653 ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000177342.b ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000154453.a.b.b.e.b Channel bull blenny MODERN SPECIES 8 kirrel1b (ENSCGOG00000024439) cadm3 (ENSCGOG00000024430) sdhc (ENSCGOG00000024427) ENSCGOG00000024425 atp1a2a (ENSCGOG00000021903) mpz (ENSCGOG00000021664) lig1 (ENSCGOG00000021149) ENSCGOG00000021113 ENSCGOG00000021111 SVIL (ENSCGOG00000020676) ENSCGOG00000020655 ENSCGOG00000020654 ENSCGOG00000020643 ENSCGOG00000020635 ENSCGOG00000020628 ZEB1 (ENSCGOG00000020625) ##22 ENSCGOG00000020624 ENSCGOG00000020622 ENSCGOG00000020596 pold3 (ENSCGOG00000020583) ENSCGOG00000020580 KIF5B (ENSCGOG00000018013) arhgap12b (ENSCGOG00000016529) ##27 ENSCGOG00000016420 ENSCGOG00000016408 ENSCGOG00000016384 ENSCGOG00000016298 itgb1b (ENSCGOG00000015317) NRP1 (ENSCGOG00000014798) pard3ab (ENSCGOG00000010871) ENSCGOG00000010787 Pike perch MODERN SPECIES 113 cadm3 (ENSSLUG00000009944) sdhc (ENSSLUG00000009977) atp1a2a (ENSSLUG00000010003) mpz (ENSSLUG00000010087) lig1 (ENSSLUG00000010207) ENSSLUG00000011998 PIP4P1 (ENSSLUG00000012004) dnaaf6 (ENSSLUG00000012012) ENSSLUG00000012018 eif3f (ENSSLUG00000012037) KCNJ9 (ENSSLUG00000012138) ENSSLUG00000012155 SVIL (ENSSLUG00000012266) ENSSLUG00000013942 ENSSLUG00000013964 ZEB1 (ENSSLUG00000013981) ##22 ENSSLUG00000014016 ENSSLUG00000014025 ENSSLUG00000014027 ENSSLUG00000014033 ENSSLUG00000014038 ENSSLUG00000014047 jph1b (ENSSLUG00000014058) ENSSLUG00000014069 ENSSLUG00000014078 ENSSLUG00000014090 ENSSLUG00000014092 sdr16c5a (ENSSLUG00000014097) ENSSLUG00000014104 ENSSLUG00000014108 ENSSLUG00000014114 Cottioidei ANCESTRAL SPECIES 22 ENSGT00950000182991.A.b.a ENSGT00990000203615.b.a.a.a.a.h ENSGT00940000155795.e ENSGT00390000000566 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000154653 ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b ENSGT00940000163239 ENSGT00940000165190.A.a.b ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000154453.a.b.b.e.b ENSGT00940000161191.A.a.b ENSGT00940000158085.b.b Stickleback MODERN SPECIES 2 ENSGACG00000017688 sdhc (ENSGACG00000017685) atp1a2a (ENSGACG00000017683) mpz (ENSGACG00000017682) lig1 (ENSGACG00000017679) PIP4P1 (ENSGACG00000017675) ENSGACG00000017674 dnaaf6 (ENSGACG00000017672) eif3f (ENSGACG00000017667) KCNJ9 (ENSGACG00000017665) SVIL (ENSGACG00000017656) ENSGACG00000017655 ENSGACG00000017654 ENSGACG00000017652 ENSGACG00000017650 ENSGACG00000017648 ##22 ENSGACG00000017644 pold3 (ENSGACG00000017641) ENSGACG00000017619 KIF5B (ENSGACG00000017607) ENSGACG00000017606 arhgap12b (ENSGACG00000017604) ##27 ENSGACG00000017595 ENSGACG00000017594 ENSGACG00000017590 ENSGACG00000017584 KLF6 (ENSGACG00000017582) pitrm1 (ENSGACG00000017575) PFKP (ENSGACG00000017568) ENSGACG00000017565 LACTB2 (ENSGACG00000017561) Lumpfish DUPLICATION Lumpfish MODERN SPECIES 8 ENSCLMG00005014449 KCNJ10 (ENSCLMG00005014451) ENSCLMG00005014453 ENSCLMG00005014454 KIRREL1 (ENSCLMG00005014458) KCNJ9 (ENSCLMG00005014460) eif3f (ENSCLMG00005014462) ENSCLMG00005014506 dnaaf6 (ENSCLMG00005014507) PIP4P1 (ENSCLMG00005014508) ENSCLMG00005014511 lig1 (ENSCLMG00005014513) cadm3 (ENSCLMG00005014514) SVIL (ENSCLMG00005014519) ENSCLMG00005015559 ENSCLMG00005015567 ##22 ENSCLMG00005015569 ##22 ENSCLMG00005015571 ENSCLMG00005015572 MYO10 (ENSCLMG00005015583) ENSCLMG00005016216 adcy8 (ENSCLMG00005016226) ENSCLMG00005016234 efr3a (ENSCLMG00005016273) ENSCLMG00005018736 ENSCLMG00005018738 KCNQ3 (ENSCLMG00005018740) dnaaf11 (ENSCLMG00005004381) ENSCLMG00005004409 ENSCLMG00005004422 ENSCLMG00005004435 Lumpfish MODERN SPECIES 8 KCNJ10 (ENSCLMG00005014451) ENSCLMG00005014453 ENSCLMG00005014454 KIRREL1 (ENSCLMG00005014458) KCNJ9 (ENSCLMG00005014460) eif3f (ENSCLMG00005014462) ENSCLMG00005014506 dnaaf6 (ENSCLMG00005014507) PIP4P1 (ENSCLMG00005014508) ENSCLMG00005014511 lig1 (ENSCLMG00005014513) cadm3 (ENSCLMG00005014514) SVIL (ENSCLMG00005014519) ENSCLMG00005015559 ENSCLMG00005015567 ##22 ENSCLMG00005015569 ##22 ENSCLMG00005015571 ENSCLMG00005015572 MYO10 (ENSCLMG00005015583) ENSCLMG00005016216 adcy8 (ENSCLMG00005016226) ENSCLMG00005016234 efr3a (ENSCLMG00005016273) ENSCLMG00005018736 ENSCLMG00005018738 KCNQ3 (ENSCLMG00005018740) dnaaf11 (ENSCLMG00005004381) ENSCLMG00005004409 ENSCLMG00005004422 ENSCLMG00005004435 tmem71 (ENSCLMG00005004452) Percomorphaceae_D ANCESTRAL SPECIES 48 ENSGT01010000222336.a.a.a.a.a.b.a.b ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000177342.b Anabantaria ANCESTRAL SPECIES 8 ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT01010000222336.a.a.a.a.a.b.a.b ENSGT01010000222336.a.a.a.a.a.b.a.a ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000177342.b ENSGT00940000160228.i.b.g ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT00940000165190.A.a.b ENSGT01030000234815 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.h ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a Anabantoidei ANCESTRAL SPECIES 27 ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT01010000222336.a.a.a.a.a.b.a.b ENSGT01010000222336.a.a.a.a.a.b.a.a ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000177342.b ENSGT00940000160228.i.b.g ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT00940000165190.A.a.b ENSGT01030000234815 ENSGT00940000154801.o.a ENSGT00940000167043 ENSGT00940000166346 ENSGT01050000244890.a.a.b ENSGT00940000158452 ENSGT00390000006103 ENSGT00390000000337 Climbing perch MODERN SPECIES 8 ENSATEG00000015166 kirrel1b (ENSATEG00000015184) cadm3 (ENSATEG00000015232) sdhc (ENSATEG00000015268) atp1a2a (ENSATEG00000015436) mpz (ENSATEG00000029547) lig1 (ENSATEG00000015524) ENSATEG00000015537 ENSATEG00000015551 ENSATEG00000015585 ENSATEG00000015621 ENSATEG00000015635 ENSATEG00000015662 ENSATEG00000015709 ENSATEG00000016029 ENSATEG00000016063 ##22 ENSATEG00000026650 ENSATEG00000016146 ENSATEG00000016894 ENSATEG00000016957 ENSATEG00000029161 ENSATEG00000027278 ENSATEG00000026576 ENSATEG00000029249 ENSATEG00000017264 ENSATEG00000017186 ENSATEG00000017334 zgc:66427 (ENSATEG00000017374) ENSATEG00000029998 ENSATEG00000027536 parp2 (ENSATEG00000017409) Siamese fighting fish MODERN SPECIES 8 ENSBSLG00000022826 VANGL2 (ENSBSLG00000022787) ENSBSLG00000022644 copa (ENSBSLG00000022637) ENSBSLG00000022629 VANGL2 (ENSBSLG00000022623) NCSTN (ENSBSLG00000022614) NCSTN (ENSBSLG00000022585) copa (ENSBSLG00000022298) pex19 (ENSBSLG00000022287) ltb4r2b (ENSBSLG00000022285) NFATC4 (ENSBSLG00000022280) MYADM (ENSBSLG00000022279) sdr39u1 (ENSBSLG00000022274) ENSBSLG00000022270 ZEB1 (ENSBSLG00000022261) ##22 ENSBSLG00000022185 pold3 (ENSBSLG00000022172) ENSBSLG00000022159 ENSBSLG00000022151 ENSBSLG00000022141 KIF5B (ENSBSLG00000021613) zgc:66427 (ENSBSLG00000021601) ENSBSLG00000021597 parp2 (ENSBSLG00000021433) ENSBSLG00000021200 ENSBSLG00000021124 ENSBSLG00000021101 ENSBSLG00000021045 ENSBSLG00000021009 SVIL (ENSBSLG00000018943) Zig-zag eel MODERN SPECIES 8 ENSMAMG00000028637 ENSMAMG00000024969 ENSMAMG00000025656 ENSMAMG00000027510 ENSMAMG00000026056 ENSMAMG00000025132 ENSMAMG00000027571 ENSMAMG00000027431 ENSMAMG00000024562 ENSMAMG00000009617 ENSMAMG00000026106 ENSMAMG00000025023 ENSMAMG00000028064 ENSMAMG00000025982 ENSMAMG00000009827 ENSMAMG00000009836 ##22 ENSMAMG00000009884 ENSMAMG00000010790 ENSMAMG00000010829 ENSMAMG00000010925 ENSMAMG00000010961 ENSMAMG00000011033 ENSMAMG00000011045 ##27 ENSMAMG00000011127 ENSMAMG00000028654 ENSMAMG00000011761 ENSMAMG00000011789 ITGB1 (ENSMAMG00000011841) NRP1 (ENSMAMG00000011904) ENSMAMG00000011996 CREM (ENSMAMG00000012212) Carangaria ANCESTRAL SPECIES 5 ENSGT00390000000566 ENSGT00940000177717 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000154653 ENSGT01010000222336.a.a.a.a.a.b.a.b ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT00940000165190.A.a.b ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00970000198099 ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000156952.a.b Carangaria_A ANCESTRAL SPECIES 2 ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000154653 ENSGT01010000222336.a.a.a.a.a.b.a.b ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b ENSGT00940000163239 ENSGT00940000165190.A.a.b ENSGT00940000165190.A.a.a ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00970000198099 ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p Seriola ANCESTRAL SPECIES 59 ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT01090000259997.a.d.b.a.b.a.b.b.b.d ENSGT01010000222336.a.a.a.a.a.a.j ENSGT01010000222336.a.a.a.a.a.a.i.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.m ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT00940000165190.A.a.b.m ENSGT01030000234815 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.n ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000156952.a.b Greater amberjack MODERN SPECIES 135 ENSSDUG00000009864 ENSSDUG00000009830 ENSSDUG00000009820 ENSSDUG00000009814 ENSSDUG00000009807 ZEB1 (ENSSDUG00000009800) ##22 ENSSDUG00000009726 pold3 (ENSSDUG00000009664) ENSSDUG00000009643 ENSSDUG00000009607 ENSSDUG00000009564 ENSSDUG00000009530 ENSSDUG00000009518 KIF5B (ENSSDUG00000009450) arhgap12b (ENSSDUG00000009294) ##27 ENSSDUG00000008542 ENSSDUG00000008495 ENSSDUG00000008479 ENSSDUG00000008421 itgb1b (ENSSDUG00000008363) NRP1 (ENSSDUG00000008307) Yellowtail amberjack MODERN SPECIES 3075 sdhc (ENSSLDG00000006663) atp1a2a (ENSSLDG00000006609) mpz (ENSSLDG00000006585) lig1 (ENSSLDG00000006550) ENSSLDG00000006532 PIP4P1 (ENSSLDG00000006515) dnaaf6 (ENSSLDG00000006498) ENSSLDG00000006481 eif3f (ENSSLDG00000006452) ENSSLDG00000006407 ENSSLDG00000006381 SVIL (ENSSLDG00000006287) ENSSLDG00000006268 ENSSLDG00000006244 ENSSLDG00000006184 ZEB1 (ENSSLDG00000006026) ##22 ENSSLDG00000005978 ENSSLDG00000005935 pold3 (ENSSLDG00000005873) ENSSLDG00000005826 ENSSLDG00000005805 ENSSLDG00000005748 KIF5B (ENSSLDG00000005617) arhgap12b (ENSSLDG00000005486) ##27 ENSSLDG00000004311 ENSSLDG00000004120 ENSSLDG00000004073 itgb1b (ENSSLDG00000003954) NRP1 (ENSSLDG00000003912) pard3ab (ENSSLDG00000003617) CREM (ENSSLDG00000003533) Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 74 sdhc (ENSLCAG00010001506) atp1a2a (ENSLCAG00010001574) mpz (ENSLCAG00010002218) lig1 (ENSLCAG00010002307) ENSLCAG00010002689 PIP4P1 (ENSLCAG00010002693) dnaaf6 (ENSLCAG00010002697) ENSLCAG00010002702 eif3f (ENSLCAG00010002705) KCNJ9 (ENSLCAG00010002708) ENSLCAG00010002713 SVIL (ENSLCAG00010002751) ENSLCAG00010002944 ENSLCAG00010002948 ENSLCAG00010002950 ##22 ZEB1 (ENSLCAG00010002951) ##22 ENSLCAG00010003035 pold3 (ENSLCAG00010003572) ENSLCAG00010003576 ENSLCAG00010003600 ENSLCAG00010003610 ENSLCAG00010003632 KIF5B (ENSLCAG00010003948) ENSLCAG00010006282 arhgap12b (ENSLCAG00010006342) ##27 ENSLCAG00010006537 ENSLCAG00010006690 Barramundi perch MODERN SPECIES 74 cadm3 (ENSLCAG00010001501) sdhc (ENSLCAG00010001506) atp1a2a (ENSLCAG00010001574) mpz (ENSLCAG00010002218) lig1 (ENSLCAG00010002307) ENSLCAG00010002689 PIP4P1 (ENSLCAG00010002693) dnaaf6 (ENSLCAG00010002697) ENSLCAG00010002702 eif3f (ENSLCAG00010002705) KCNJ9 (ENSLCAG00010002708) ENSLCAG00010002713 SVIL (ENSLCAG00010002751) ENSLCAG00010002944 ENSLCAG00010002948 ENSLCAG00010002950 ##22 ZEB1 (ENSLCAG00010002951) ##22 ENSLCAG00010003035 pold3 (ENSLCAG00010003572) ENSLCAG00010003576 ENSLCAG00010003600 ENSLCAG00010003610 ENSLCAG00010003632 KIF5B (ENSLCAG00010003948) ENSLCAG00010006282 arhgap12b (ENSLCAG00010006342) ##27 ENSLCAG00010006537 ENSLCAG00010006690 Pleuronectoidei ANCESTRAL SPECIES 1 ENSGT00940000155795.e ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000177717 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT00940000165190.A.a.b ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000156952.a.b ENSGT00940000154453.a.b.b.e.b Tongue sole MODERN SPECIES 12 atp1a2a (ENSCSEG00000021656) ENSCSEG00000021658 mpz (ENSCSEG00000021668) lig1 (ENSCSEG00000021669) ENSCSEG00000021674 PIP4P1 (ENSCSEG00000021675) dnaaf6 (ENSCSEG00000021676) ENSCSEG00000021677 eif3f (ENSCSEG00000021678) KCNJ9 (ENSCSEG00000021679) ENSCSEG00000021680 ENSCSEG00000021681 SVIL (ENSCSEG00000021682) ENSCSEG00000021683 ENSCSEG00000021689 ZEB1 (ENSCSEG00000021695) ##22 ENSCSEG00000021700 pold3 (ENSCSEG00000021727) ENSCSEG00000006366 ENSCSEG00000006380 ENSCSEG00000006418 KIF5B (ENSCSEG00000006440) ENSCSEG00000006456 arhgap12a (ENSCSEG00000006471) ##27 ENSCSEG00000006584 KCNJ10 (ENSCSEG00000006610) ENSCSEG00000006670 ptmab (ENSCSEG00000006674) fam49ba (ENSCSEG00000006682) VCPIP1 (ENSCSEG00000006691) ENSCSEG00000006696 Turbot MODERN SPECIES 19 sdhc (ENSSMAG00000023076) ENSSMAG00000009428 atp1a2a (ENSSMAG00000009388) mpz (ENSSMAG00000009360) lig1 (ENSSMAG00000009327) ENSSMAG00000026302 ENSSMAG00000033170 dnaaf6 (ENSSMAG00000009284) ENSSMAG00000009260 ENSSMAG00000009225 ENSSMAG00000009207 ENSSMAG00000009180 ENSSMAG00000009067 ENSSMAG00000009054 ENSSMAG00000034506 ENSSMAG00000009016 ##22 ENSSMAG00000007842 ENSSMAG00000007734 ENSSMAG00000033726 ENSSMAG00000007651 ENSSMAG00000007625 ENSSMAG00000007595 ENSSMAG00000007536 ENSSMAG00000007340 ##27 ENSSMAG00000007249 ENSSMAG00000010902 ENSSMAG00000025640 ENSSMAG00000031673 ENSSMAG00000027588 ENSSMAG00000007185 ENSSMAG00000007101 Ovalentaria ANCESTRAL SPECIES 5 ENSGT00390000000566 ENSGT00940000177717 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000177440 ENSGT01010000222336.a.a.a.a.a.b.a.a ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000177342.b ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000156952.a.b ENSGT00940000154453.a.b.b.e.b Atherinomorphae ANCESTRAL SPECIES 4 ENSGT00940000159936 ENSGT00940000177717 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT01010000222336.a.a.a.a.a.b.a.b.b ENSGT01010000222336.a.a.a.a.a.a ENSGT01010000222336.a.a.a.a.a.b.a.b.a ENSGT01010000222336.a.b.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.e ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.f ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000154453.a.b.b.e.b Oryzias ANCESTRAL SPECIES 25 ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000159936 ENSGT00940000177717 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT01010000222336.a.a.a.a.a.b.a.b.a.a ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.e ENSGT00940000163239 ENSGT01030000234815 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.f ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000154453.a.b.b.e.b ENSGT00940000161191.A.a.b Oryzias_b ANCESTRAL SPECIES 28 ENSGT00390000000566 ENSGT00940000159936 ENSGT00940000177717 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT01010000222336.a.a.a.a.a.b.a.b.a.a ENSGT01010000222336.a.a.a.a.a.b.a.b.b ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.e ENSGT00940000163239 ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.f ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000154453.a.b.b.e.b ENSGT00940000161191.A.a.b Indian medaka MODERN SPECIES 171 ENSOMEG00000014973 ENSOMEG00000014882 ZEB1 (ENSOMEG00000014865) ##22 ENSOMEG00000014834 Javanese ricefish MODERN SPECIES 8 lig1 (ENSOJAG00000008289) ENSOJAG00000009940 PIP4P1 (ENSOJAG00000009952) dnaaf6 (ENSOJAG00000009986) ENSOJAG00000010015 eif3f (ENSOJAG00000010041) KCNJ9 (ENSOJAG00000010246) ENSOJAG00000010261 ENSOJAG00000011301 ENSOJAG00000011344 ENSOJAG00000011369 ENSOJAG00000011388 ENSOJAG00000011399 ENSOJAG00000011408 ENSOJAG00000011433 ZEB1 (ENSOJAG00000011448) ##22 ENSOJAG00000011540 ENSOJAG00000013303 pold3 (ENSOJAG00000013326) KIF5B (ENSOJAG00000013377) ENSOJAG00000013792 arhgap12b (ENSOJAG00000013837) ##27 ENSOJAG00000014319 ENSOJAG00000014862 ENSOJAG00000014877 ENSOJAG00000015054 itgb1b.1 (ENSOJAG00000015398) NRP1 (ENSOJAG00000015813) pard3ab (ENSOJAG00000015903) ENSOJAG00000016484 CCNY (ENSOJAG00000016501) Oryzias_a ANCESTRAL SPECIES 25 ENSGT00940000155795.e ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT01010000222336.a.a.a.a.a.b.a.b.a.a.b ENSGT01010000222336.a.a.a.a.a.b.a.b.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.e ENSGT00940000163239 ENSGT01030000234815 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.f ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000154453.a.b.b.e.b ENSGT00940000161191.A.a.b Chinese medaka MODERN SPECIES 269 ZEB1 (ENSOSIG00000000293) ##22 ENSOSIG00000000326 Cyprinodontiformes ANCESTRAL SPECIES 5 ENSGT00940000159779 ENSGT00390000000566 ENSGT00990000208298 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT01010000222336.a.a.a.a.a.b.a.b.b ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.e ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.f ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000154453.a.b.b.e.b Aplocheiloidei ANCESTRAL SPECIES 11 ENSGT00940000155795.e ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000154653 ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.e ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT01030000234815 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.f ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000154453.a.b.b.e.b Mangrove rivulus MODERN SPECIES 17 ENSKMAG00000017378 kirrel1b (ENSKMAG00000017335) cadm3 (ENSKMAG00000017272) sdhc (ENSKMAG00000017170) atp1a2a (ENSKMAG00000017108) mpz (ENSKMAG00000017080) lig1 (ENSKMAG00000017040) PIP4P1 (ENSKMAG00000017014) dnaaf6 (ENSKMAG00000016996) eif3f (ENSKMAG00000016965) ENSKMAG00000016952 KCNJ9 (ENSKMAG00000016933) ENSKMAG00000016907 ENSKMAG00000016877 ENSKMAG00000016849 ZEB1 (ENSKMAG00000016821) ##22 ENSKMAG00000016806 ENSKMAG00000016774 pold3 (ENSKMAG00000016719) ENSKMAG00000016632 ENSKMAG00000016597 KIF5B (ENSKMAG00000016510) arhgap12a (ENSKMAG00000016385) ##27 ENSKMAG00000016296 Turquoise killifish MODERN SPECIES 1618 kirrel1b (ENSNFUG00015021298) ENSNFUG00015021296 ENSNFUG00015021293 CADM3 (ENSNFUG00015021288) sdhc (ENSNFUG00015021258) atp1a2a (ENSNFUG00015021204) mpz (ENSNFUG00015021181) lig1 (ENSNFUG00015020384) ENSNFUG00015020349 TMEM55B (ENSNFUG00015020343) dnaaf6 (ENSNFUG00015020337) ENSNFUG00015020336 EIF3F (ENSNFUG00015020335) ENSNFUG00015020331 ENSNFUG00015020330 ZEB1A (ENSNFUG00015020326) ##22 ENSNFUG00015020259 POLD3 (ENSNFUG00015020243) ENSNFUG00015020197 ENSNFUG00015020189 KIF5B (ENSNFUG00015019705) ARHGAP12A (ENSNFUG00015018978) ##27 ENSNFUG00015018953 ARSI (ENSNFUG00015018949) ENSNFUG00015018312 ENSNFUG00015018302 ITGB1 (ENSNFUG00015013225) ENSNFUG00015013106 NRP1 (ENSNFUG00015013092) ENSNFUG00015013088 ENSNFUG00015013086 Cyprinodontoidei ANCESTRAL SPECIES 2 ENSGT00940000159779 ENSGT00390000000566 ENSGT00990000208298 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT01010000222336.a.a.a.a.a.b.a.a ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.e ENSGT00940000163239 ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.f ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000154453.a.b.b.e.b ENSGT00940000161191.A.a.b Poeciliinae ANCESTRAL SPECIES 6 ENSGT00390000000566 ENSGT00990000208298 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000154653 ENSGT01010000222336.a.a.a.a.a.b.a.b.b.a ENSGT01010000222336.a.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.e ENSGT00940000163239 ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.f ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000154453.a.b.b.e.b ENSGT00940000161191.A.a.b ENSGT00940000158085.b.b Poecilia ANCESTRAL SPECIES 16 ENSGT00390000000566 ENSGT00990000208298 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000154653 ENSGT01010000222336.a.a.a.a.a.b.a.b.b.a ENSGT01010000222336.a.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.e ENSGT00940000163239 ENSGT01030000234815 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.f ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.b.b.a NAME_6 ANCESTRAL SPECIES 129 ENSGT00390000000566 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000167541 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000154653 ENSGT01010000222336.a.a.a.a.a.a.a ENSGT01010000222336.a.a.a.a.a.a.b ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.e.a ENSGT00940000163239 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.f ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 1306 ENSPLAG00000012682 ENSPLAG00000012658 ENSPLAG00000012546 ENSPLAG00000012532 ENSPLAG00000012523 ##22 ZEB1 (ENSPLAG00000012519) ##22 ENSPLAG00000012515 ENSPLAG00000012495 Sailfin molly MODERN SPECIES 1306 ENSPLAG00000012682 ENSPLAG00000012658 ENSPLAG00000012546 ENSPLAG00000012532 ENSPLAG00000012523 ##22 ZEB1 (ENSPLAG00000012519) ##22 ENSPLAG00000012515 ENSPLAG00000012495 Amazon molly DUPLICATION Amazon molly MODERN SPECIES 297 mpz (ENSPFOG00000021818) ENSPFOG00000013438 ENSPFOG00000013649 PIP4P1 (ENSPFOG00000013656) dnaaf6 (ENSPFOG00000023693) ENSPFOG00000013703 eif3f (ENSPFOG00000013707) ENSPFOG00000023826 KCNJ9 (ENSPFOG00000013742) ENSPFOG00000022792 ENSPFOG00000021927 SVIL (ENSPFOG00000013905) ENSPFOG00000014060 ENSPFOG00000021773 ZEB1 (ENSPFOG00000014086) ##22 ZEB1 (ENSPFOG00000014121) ##22 ENSPFOG00000014155 pold3 (ENSPFOG00000014773) KIF5B (ENSPFOG00000014848) arhgap12a (ENSPFOG00000015126) ##27 ENSPFOG00000015307 ENSPFOG00000024159 ENSPFOG00000024575 ENSPFOG00000015392 itgb1b (ENSPFOG00000015560) ENSPFOG00000015648 Amazon molly MODERN SPECIES 297 atp1a2a (ENSPFOG00000012970) mpz (ENSPFOG00000021818) ENSPFOG00000013438 ENSPFOG00000013649 PIP4P1 (ENSPFOG00000013656) dnaaf6 (ENSPFOG00000023693) ENSPFOG00000013703 eif3f (ENSPFOG00000013707) ENSPFOG00000023826 KCNJ9 (ENSPFOG00000013742) ENSPFOG00000022792 ENSPFOG00000021927 SVIL (ENSPFOG00000013905) ENSPFOG00000014060 ENSPFOG00000021773 ZEB1 (ENSPFOG00000014086) ##22 ZEB1 (ENSPFOG00000014121) ##22 ENSPFOG00000014155 pold3 (ENSPFOG00000014773) KIF5B (ENSPFOG00000014848) arhgap12a (ENSPFOG00000015126) ##27 ENSPFOG00000015307 ENSPFOG00000024159 ENSPFOG00000024575 ENSPFOG00000015392 itgb1b (ENSPFOG00000015560) ENSPFOG00000015648 Guppy MODERN SPECIES 447 sdhc (ENSPREG00000000623) ENSPREG00000020205 atp1a2a (ENSPREG00000020143) mpz (ENSPREG00000020111) lig1 (ENSPREG00000020070) ENSPREG00000020057 PIP4P1 (ENSPREG00000020042) dnaaf6 (ENSPREG00000020033) ENSPREG00000020015 eif3f (ENSPREG00000020003) KCNJ9 (ENSPREG00000019973) ENSPREG00000019958 SVIL (ENSPREG00000019740) ENSPREG00000019658 ENSPREG00000019637 ZEB1 (ENSPREG00000019623) ##22 ENSPREG00000019577 ENSPREG00000019541 pold3 (ENSPREG00000019517) ENSPREG00000019500 KIF5B (ENSPREG00000019436) arhgap12a (ENSPREG00000019282) ##27 ENSPREG00000019237 ENSPREG00000019199 ENSPREG00000019158 itgb1b (ENSPREG00000019071) ENSPREG00000019053 NRP1 (ENSPREG00000018822) pard3ab (ENSPREG00000018390) ENSPREG00000018193 ENSPREG00000018174 Platyfish MODERN SPECIES 20 cadm3 (ENSXMAG00000005675) sdhc (ENSXMAG00000005689) atp1a2a (ENSXMAG00000005698) mpz (ENSXMAG00000005799) lig1 (ENSXMAG00000005804) PIP4P1 (ENSXMAG00000029154) dnaaf6 (ENSXMAG00000027222) eif3f (ENSXMAG00000024749) ENSXMAG00000005884 KCNJ9 (ENSXMAG00000023406) ENSXMAG00000027432 SVIL (ENSXMAG00000005951) ENSXMAG00000001935 ENSXMAG00000014991 ENSXMAG00000014986 ZEB1 (ENSXMAG00000027880) ##22 ENSXMAG00000006010 pold3 (ENSXMAG00000006046) KIF5B (ENSXMAG00000006055) ENSXMAG00000024587 arhgap12a (ENSXMAG00000006112) ##27 ENSXMAG00000021659 ENSXMAG00000006140 ENSXMAG00000006218 ENSXMAG00000006236 itgb1b (ENSXMAG00000006244) NRP1 (ENSXMAG00000006296) ENSXMAG00000024221 ENSXMAG00000022251 pard3ab (ENSXMAG00000006330) ENSXMAG00000026626 NAME_4 ANCESTRAL SPECIES 188 ENSGT00390000000566 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000177440 ENSGT00940000154653 ENSGT01010000222336.a.a.a.a.a.b.a.a ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.e ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT00940000165190.A.b ENSGT00940000154801.o.a ENSGT01030000234815 ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.f Sheepshead minnow MODERN SPECIES 129 mpz (ENSCVAG00000010871) lig1 (ENSCVAG00000010811) ENSCVAG00000010792 PIP4P1 (ENSCVAG00000010774) dnaaf6 (ENSCVAG00000010737) ENSCVAG00000010723 eif3f (ENSCVAG00000010705) ENSCVAG00000010699 ENSCVAG00000010678 ENSCVAG00000010655 SVIL (ENSCVAG00000010632) ENSCVAG00000010565 ENSCVAG00000000689 ENSCVAG00000010532 ENSCVAG00000000688 ZEB1 (ENSCVAG00000010507) ##22 ENSCVAG00000010477 pold3 (ENSCVAG00000010196) ENSCVAG00000010191 ENSCVAG00000010166 KIF5B (ENSCVAG00000010149) ENSCVAG00000009970 arhgap12b (ENSCVAG00000009956) ##27 ENSCVAG00000009803 ENSCVAG00000009369 ENSCVAG00000009090 ENSCVAG00000009079 kif3b (ENSCVAG00000009066) ENSCVAG00000009036 ENSCVAG00000009026 wdr37 (ENSCVAG00000009016) Mummichog DUPLICATION Mummichog MODERN SPECIES 388 PIP4P1 (ENSFHEG00000013366) dnaaf6 (ENSFHEG00000013373) ENSFHEG00000013387 eif3f (ENSFHEG00000013412) KCNJ9 (ENSFHEG00000000853) ENSFHEG00000013499 ENSFHEG00000013508 ENSFHEG00000000310 ENSFHEG00000013530 ENSFHEG00000013535 ENSFHEG00000000621 ENSFHEG00000013604 ENSFHEG00000013607 ##22 ZEB1 (ENSFHEG00000013645) ##22 Mummichog MODERN SPECIES 388 PIP4P1 (ENSFHEG00000013366) dnaaf6 (ENSFHEG00000013373) ENSFHEG00000013387 eif3f (ENSFHEG00000013412) KCNJ9 (ENSFHEG00000000853) ENSFHEG00000013499 ENSFHEG00000013508 ENSFHEG00000000310 ENSFHEG00000013530 ENSFHEG00000013535 ENSFHEG00000000621 ENSFHEG00000013604 ENSFHEG00000013607 ##22 ZEB1 (ENSFHEG00000013645) ##22 Ovalentaria_B ANCESTRAL SPECIES 6 ENSGT00940000177717 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000177440 ENSGT01010000222336.a.a.a.a.a.b.a.b ENSGT01010000222336.a.a.a.a.a.b.a.a ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT01030000234815 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000156952.a.b ENSGT00940000154453.a.b.b.e.b Pomacentridae ANCESTRAL SPECIES 46 ENSGT00390000000566 ENSGT00940000177717 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000177440 ENSGT01010000222336.a.a.a.a.a.a ENSGT01010000222336.a.a.a.a.a.b.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.c ENSGT00940000163895 ENSGT00940000163239 ENSGT01030000234815 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.d ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000177290 ENSGT00940000156952.a.b Pomacentridae_A ANCESTRAL SPECIES 63 ENSGT00940000177717 ENSGT00940000159936.e ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000177440 ENSGT01010000222336.a.a.a.a.a.a.c ENSGT01010000222336.a.a.a.a.a.b.a.a.c ENSGT01010000222336.a.a.a.a.a.a.d ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.c ENSGT00940000163239 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.d ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000156952.a.b ENSGT00940000154453.a.b.b.e.b ENSGT01090000260098.B.a ENSGT00940000161191.A.a.b Amphiprion ANCESTRAL SPECIES 167 ENSGT01010000222336.a.a.a.a.a.a.d ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.d.b ENSGT00940000160228.i.b.c ENSGT00940000163239 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.d.a ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000156952.a.b ENSGT00940000154453.a.b.b.e.b ENSGT01090000260098.B.a Clown anemonefish MODERN SPECIES 3479 ptf1a (ENSAOCG00000012818) ENSAOCG00000012805 ENSAOCG00000012786 fam110b (ENSAOCG00000012767) atg10 (ENSAOCG00000012742) shhb (ENSAOCG00000012732) ENSAOCG00000012717 ENSAOCG00000012700 ENSAOCG00000012686 ENSAOCG00000012651 ENSAOCG00000012640 ZEB1 (ENSAOCG00000012588) ##22 ENSAOCG00000012514 Orange clownfish MODERN SPECIES 1 lig1 (ENSAPEG00000019333) ENSAPEG00000019280 PIP4P1 (ENSAPEG00000019242) dnaaf6 (ENSAPEG00000019198) ENSAPEG00000019133 eif3f (ENSAPEG00000019096) KCNJ9 (ENSAPEG00000019063) ENSAPEG00000019043 SVIL (ENSAPEG00000018928) ENSAPEG00000018875 ENSAPEG00000018865 ENSAPEG00000018842 ENSAPEG00000018799 ENSAPEG00000018782 ENSAPEG00000018776 ZEB1 (ENSAPEG00000018760) ##22 ENSAPEG00000018746 ENSAPEG00000018659 ENSAPEG00000016961 ENSAPEG00000016818 pold3 (ENSAPEG00000016797) KIF5B (ENSAPEG00000016669) arhgap12b (ENSAPEG00000016501) ##27 ENSAPEG00000016418 ENSAPEG00000015336 ENSAPEG00000015256 ENSAPEG00000015240 ENSAPEG00000015237 ENSAPEG00000015225 ENSAPEG00000015218 ENSAPEG00000015195 Spiny chromis MODERN SPECIES 1314 ZEB1 (ENSAPOG00000023132) ##22 ENSAPOG00000023115 Bicolor damselfish MODERN SPECIES 982 ZEB1 (ENSSPAG00000004955) ##22 ENSSPAG00000004864 Cichlidae ANCESTRAL SPECIES 2 ENSGT00940000159779 ENSGT00390000000566 ENSGT00940000177717 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000177440 ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.a ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT01030000234815 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.b ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000156952.a.b Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 270 ENSACIG00000002394 ENSACIG00000002382 ##22 ZEB1 (ENSACIG00000002318) ##22 ENSACIG00000001727 pold3 (ENSACIG00000001632) ENSACIG00000001582 KIF5B (ENSACIG00000001516) arhgap12b (ENSACIG00000001464) ##27 ENSACIG00000000527 ENSACIG00000000471 ENSACIG00000000430 ENSACIG00000000380 itgb1b (ENSACIG00000000337) NRP1 (ENSACIG00000000290) pard3ab (ENSACIG00000000184) ENSACIG00000019891 CCNY (ENSACIG00000019872) Midas cichlid MODERN SPECIES 270 ENSACIG00000002394 ENSACIG00000002382 ##22 ZEB1 (ENSACIG00000002318) ##22 ENSACIG00000001727 pold3 (ENSACIG00000001632) ENSACIG00000001582 KIF5B (ENSACIG00000001516) arhgap12b (ENSACIG00000001464) ##27 ENSACIG00000000527 ENSACIG00000000471 ENSACIG00000000430 ENSACIG00000000380 itgb1b (ENSACIG00000000337) NRP1 (ENSACIG00000000290) pard3ab (ENSACIG00000000184) ENSACIG00000019891 CCNY (ENSACIG00000019872) FZD8 (ENSACIG00000019868) Pseudocrenilabrinae ANCESTRAL SPECIES 7 ENSGT00940000177717 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000177440 ENSGT01010000222336.a.a.a.a.a.b.a.b ENSGT01010000222336.a.a.a.a.a.b.a.a ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.a ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT01030000234815 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.b ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000156952.a.b Nile tilapia MODERN SPECIES 9 ENSONIG00000020988 eif3f (ENSONIG00000015090) KCNJ9 (ENSONIG00000015087) ENSONIG00000028510 SVIL (ENSONIG00000015078) ENSONIG00000042589 ENSONIG00000031279 ENSONIG00000039264 ENSONIG00000015075 ENSONIG00000030069 ENSONIG00000020987 ENSONIG00000035094 ENSONIG00000036511 ENSONIG00000015073 ENSONIG00000028079 ZEB1 (ENSONIG00000015066) ##22 ENSONIG00000015048 pold3 (ENSONIG00000015043) ENSONIG00000029124 ENSONIG00000028923 KIF5B (ENSONIG00000015032) ENSONIG00000032055 arhgap12b (ENSONIG00000015026) ##27 ENSONIG00000015004 ENSONIG00000029009 ENSONIG00000032256 ENSONIG00000023143 ENSONIG00000037410 ENSONIG00000014994 itgb1b (ENSONIG00000014982) NRP1 (ENSONIG00000014970) Pseudocrenilabrinae_A ANCESTRAL SPECIES 4 ENSGT00940000177717 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000177440 ENSGT01010000222336.a.a.a.a.a.b.a.b ENSGT01010000222336.a.a.a.a.a.b.a.a ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.a ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT01030000234815 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.b ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000156952.a.b Haplochromini ANCESTRAL SPECIES 2 ENSGT00940000177717 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000177440 ENSGT01010000222336.a.a.a.a.a.b.a.b ENSGT01010000222336.a.a.a.a.a.b.a.a ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.a ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT01030000234815 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.b ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000154453.a.b.b.e.b Burton s mouthbrooder MODERN SPECIES 291 mpz (ENSHBUG00000008072) lig1 (ENSHBUG00000008096) ENSHBUG00000008146 PIP4P1 (ENSHBUG00000008177) dnaaf6 (ENSHBUG00000008223) ENSHBUG00000008263 eif3f (ENSHBUG00000008284) KCNJ9 (ENSHBUG00000008337) ENSHBUG00000008366 ENSHBUG00000008420 ENSHBUG00000008440 ENSHBUG00000008449 ENSHBUG00000008461 ENSHBUG00000008472 ENSHBUG00000008486 ZEB1 (ENSHBUG00000008492) ##22 ENSHBUG00000008516 pold3 (ENSHBUG00000000853) ENSHBUG00000008638 ENSHBUG00000008655 KIF5B (ENSHBUG00000008668) arhgap12b (ENSHBUG00000008866) ##27 ENSHBUG00000008885 ENSHBUG00000008898 ENSHBUG00000008908 ENSHBUG00000008928 itgb1b (ENSHBUG00000008984) NRP1 (ENSHBUG00000009059) pard3ab (ENSHBUG00000009563) ENSHBUG00000009635 CCNY (ENSHBUG00000000252) Haplochromini_A ANCESTRAL SPECIES 3 ENSGT00940000177717 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000177440 ENSGT01010000222336.a.a.a.a.a.b.a.b ENSGT01010000222336.a.a.a.a.a.b.a.a ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.a ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT01030000234815 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.b ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000154453.a.b.b.e.b Haplochromini_B ANCESTRAL SPECIES 35 ENSGT00940000177717 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00530000063666.b.db ENSGT00950000183073.a.a.a ENSGT01080000257365.b.a.b.b ENSGT00940000166891.b ENSGT00940000177440 ENSGT01010000222336.a.a.a.a.a.b.a.b ENSGT01010000222336.a.a.a.a.a.b.a.a ENSGT01010000222336.a.a.a.a.a.a ENSGT00950000183208.B.f.b ##22 ENSGT00940000160228.i.b.a ENSGT00940000163239 ENSGT00940000165190.A.a.a ENSGT01030000234815 ENSGT00940000154801.o.a ENSGT00950000182860.a.a.b.a.a ##27 ENSGT00940000160228.i.b.b ENSGT00730000114275 ENSGT00940000166125 ENSGT00940000155003.e.b ENSGT01090000259987.a.b.d.b.a ENSGT00940000157169.d ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000154453.a.b.b.e.b Eastern happy MODERN SPECIES 9 mpz (ENSACLG00000003936) lig1 (ENSACLG00000003888) ENSACLG00000003873 PIP4P1 (ENSACLG00000003549) dnaaf6 (ENSACLG00000003527) ENSACLG00000003495 eif3f (ENSACLG00000003474) ENSACLG00000003438 ENSACLG00000003413 ENSACLG00000003373 ENSACLG00000003355 ENSACLG00000003216 ENSACLG00000003200 ENSACLG00000003191 ENSACLG00000003179 ZEB1 (ENSACLG00000003161) ##22 ENSACLG00000002939 pold3 (ENSACLG00000002768) ENSACLG00000002645 ENSACLG00000002594 KIF5B (ENSACLG00000002525) arhgap12b (ENSACLG00000002391) ##27 ENSACLG00000002232 ENSACLG00000002210 ENSACLG00000002168 ENSACLG00000002051 itgb1b (ENSACLG00000001938) NRP1 (ENSACLG00000001814) pard3ab (ENSACLG00000001398) ENSACLG00000001224 CCNY (ENSACLG00000001157) Zebra mbuna MODERN SPECIES 1100 atp1a2a (ENSMZEG00005024097) mpz (ENSMZEG00005024094) lig1 (ENSMZEG00005024088) ENSMZEG00005024086 PIP4P1 (ENSMZEG00005024083) dnaaf6 (ENSMZEG00005024082) ENSMZEG00005024079 eif3f (ENSMZEG00005024078) KCNJ9 (ENSMZEG00005024076) ENSMZEG00005024075 ENSMZEG00005024074 ENSMZEG00005024072 ENSMZEG00005024071 ENSMZEG00005024069 ENSMZEG00005024068 ZEB1 (ENSMZEG00005024066) ##22 ENSMZEG00005023938 pold3 (ENSMZEG00005023933) ENSMZEG00005005684 ENSMZEG00005005389 ENSMZEG00005005351 ENSMZEG00005005306 itgb1b.1 (ENSMZEG00005005226) NRP1 (ENSMZEG00005005179) pard3ab (ENSMZEG00005004812) ENSMZEG00005004761 CCNY (ENSMZEG00005004726) ENSMZEG00005004700 FZD8 (ENSMZEG00005004694) KLF6 (ENSMZEG00005004649) pitrm1 (ENSMZEG00005004538) P. nyererei MODERN SPECIES 398 ENSPNYG00000016335 ZEB1 (ENSPNYG00000016307) ##22 ENSPNYG00000016265 ENSPNYG00000016227 pold3 (ENSPNYG00000016211) ENSPNYG00000016082 ENSPNYG00000016048 KIF5B (ENSPNYG00000016028) arhgap12b (ENSPNYG00000015978) ##27 ENSPNYG00000014623 ENSPNYG00000014026 ENSPNYG00000013998 ENSPNYG00000013971 itgb1b (ENSPNYG00000013913) NRP1 (ENSPNYG00000013837) ENSPNYG00000013795 pard3ab (ENSPNYG00000013746) Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 489 ENSNBRG00000023081 ##22 ZEB1 (ENSNBRG00000023052) ##22 ENSNBRG00000022712 pold3 (ENSNBRG00000022637) ENSNBRG00000022627 ENSNBRG00000022620 ENSNBRG00000022593 KIF5B (ENSNBRG00000022547) ENSNBRG00000022532 ##27 arhgap12b (ENSNBRG00000022517) ##27 ENSNBRG00000022479 Lyretail cichlid MODERN SPECIES 489 ENSNBRG00000023081 ##22 ZEB1 (ENSNBRG00000023052) ##22 ENSNBRG00000022712 pold3 (ENSNBRG00000022637) ENSNBRG00000022627 ENSNBRG00000022620 ENSNBRG00000022593 KIF5B (ENSNBRG00000022547) ENSNBRG00000022532 ##27 arhgap12b (ENSNBRG00000022517) ##27 ENSNBRG00000022479 Otomorpha ANCESTRAL SPECIES 406 ENSGT00390000015219 ENSGT00390000003680.a.a.a ENSGT00940000163212.A ENSGT00940000157783 ENSGT01030000234556.a.b.b ENSGT00940000159936 ENSGT00390000000566 ENSGT00940000159779 ENSGT00940000155795.e ENSGT00940000159520.h ENSGT00950000183208.B.f.b ##22 ENSGT00950000182860.a.a.b.a.a.a.b ##27 ENSGT00940000154801.m.b Clupeiformes ANCESTRAL SPECIES 677 ENSGT00940000159520.h.h.a.a.b ENSGT00950000183208.B.f.b ##22 ENSGT00950000182860.a.a.b.a.a.a.b ##27 ENSGT00940000154801.m.b Denticle herring MODERN SPECIES 14 atp1a2a (ENSDCDG00000032318) mpz (ENSDCDG00000032267) ENSDCDG00000031940 zgc:152670 (ENSDCDG00000031918) ENSDCDG00000031914 PIP4P1 (ENSDCDG00000031912) dnaaf6 (ENSDCDG00000031907) EIF3F (ENSDCDG00000031853) KCNJ9 (ENSDCDG00000031847) ENSDCDG00000031845 SVIL (ENSDCDG00000031474) ENSDCDG00000031456 ENSDCDG00000031455 ENSDCDG00000031454 ENSDCDG00000031452 ENSDCDG00000031450 ##22 arhgap12a (ENSDCDG00000031091) ##27 KIF5B (ENSDCDG00000030549) PFKP (ENSDCDG00000029323) pitrm1 (ENSDCDG00000029261) ENSDCDG00000029258 fzd8b (ENSDCDG00000029257) ENSDCDG00000029254 ENSDCDG00000029253 ENSDCDG00000029251 pard3ab (ENSDCDG00000028464) nrp1b (ENSDCDG00000028416) itgb1b (ENSDCDG00000022976) epc1b (ENSDCDG00000022569) WDR37 (ENSDCDG00000022323) gtpbp4 (ENSDCDG00000021971) Atlantic herring MODERN SPECIES 17 ENSCHAG00000006293 ENSCHAG00000006368 ENSCHAG00000006388 RXFP3 (ENSCHAG00000006403) ENSCHAG00000006433 sirt6 (ENSCHAG00000006454) ENSCHAG00000006579 ENSCHAG00000006656 ENSCHAG00000006677 ENSCHAG00000006695 ENSCHAG00000006726 ENSCHAG00000006732 ENSCHAG00000006753 ENSCHAG00000006781 ENSCHAG00000006809 ENSCHAG00000006844 ##22 ENSCHAG00000006973 ##27 ENSCHAG00000007102 ENSCHAG00000007248 ENSCHAG00000007271 ENSCHAG00000000842 zpr1 (ENSCHAG00000001273) ENSCHAG00000001282 mbd3a (ENSCHAG00000001357) zpr1 (ENSCHAG00000002035) ENSCHAG00000002047 MEX3D (ENSCHAG00000002074) UNC13A (ENSCHAG00000002242) ENSCHAG00000005433 ACVR2B (ENSCHAG00000005509) scn12aa (ENSCHAG00000007432) Otophysi ANCESTRAL SPECIES 136 ENSGT00390000015219 ENSGT00390000003680.a.a.a ENSGT00940000163212.A ENSGT00940000157783 ENSGT01030000234556.a.b.b ENSGT00940000159936 ENSGT00390000000566 ENSGT00940000159779 ENSGT00940000155795.e ENSGT00940000159520.h ENSGT00950000183208.B.f.b ##22 ENSGT00950000182860.a.a.b.a.a.a.b ##27 ENSGT00940000154801.m.b ENSGT00940000165563.b ENSGT00940000155003.f ENSGT01090000259987.a.b.d.b.a.l ENSGT01090000259987.a.b.d.b.a.k ENSGT00940000155270.j ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000156952.a.b ENSGT00940000158506 ENSGT00940000159760 ENSGT00530000064699 ENSGT00940000159042 ENSGT00390000002143.a Characiphysae ANCESTRAL SPECIES 137 ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.a ENSGT00390000004674.j ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00950000183208.B.f.b ##22 ENSGT00950000182860.a.a.b.a.a.a.b ##27 ENSGT00940000154801.m.b ENSGT00940000165563.b ENSGT00940000155003.f ENSGT01090000259987.a.b.d.b.a.l ENSGT00940000155003.e.a.e ENSGT01090000259987.a.b.d.b.a.k ENSGT00940000155270.j ENSGT00950000183214.a.a.a.a ENSGT00940000156952.a.b ENSGT00940000158506 ENSGT00940000159760 ENSGT00530000064699 ENSGT00940000159042 ENSGT00390000002143.a Channel catfish MODERN SPECIES 12 ENSIPUG00000015436 CDC34 (ENSIPUG00000015462) abhd17aa (ENSIPUG00000015519) ENSIPUG00000015591 Lpar4 (ENSIPUG00000015602) rorcb (ENSIPUG00000015615) sh3gl1a (ENSIPUG00000015655) stap2a (ENSIPUG00000015783) sema4e (ENSIPUG00000015806) sema4e (ENSIPUG00000015842) cactin (ENSIPUG00000015862) ENSIPUG00000015889 ENSIPUG00000015899 ENSIPUG00000015909 ENSIPUG00000015923 ZEB1 (ENSIPUG00000015972) ##22 arhgap12a (ENSIPUG00000016023) ##27 epc1b (ENSIPUG00000016101) KIRREL (ENSIPUG00000016174) cadm3 (ENSIPUG00000016275) sdhc (ENSIPUG00000016379) piwil1 (ENSIPUG00000016443) ENSIPUG00000016488 PRKAB2 (ENSIPUG00000016527) ENSIPUG00000016556 ENSIPUG00000016596 Harbi1 (ENSIPUG00000016605) ENSIPUG00000016618 FEM1A (ENSIPUG00000016646) PTPRS (ENSIPUG00000016658) ENSIPUG00000016727 Characiphysae_b ANCESTRAL SPECIES 111 ENSGT00940000159779.c ENSGT00390000000566 ENSGT00940000159936 ENSGT01030000234556.a.b.b ENSGT00940000157783 ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.a ENSGT00390000004674.j ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00950000183208.B.f.b ##22 ENSGT00950000182860.a.a.b.a.a.a.b ##27 ENSGT00940000154801.m.b ENSGT00940000165563.b ENSGT00940000155003.f ENSGT01090000259987.a.b.d.b.a.l ENSGT00940000155003.e.a.e ENSGT01090000259987.a.b.d.b.a.k ENSGT00940000155270.j ENSGT00950000183214.a.a.a.a ENSGT00940000156952.a.b Characoidei ANCESTRAL SPECIES 63 ENSGT00390000007694 ENSGT00940000166901 ENSGT00940000156635 ENSGT00940000153968.a.a.f ENSGT00940000154906.C.d ENSGT00940000163212.A ENSGT00390000003680.a.a.a ENSGT00390000015219 ENSGT00940000156132.g ENSGT00730000111085.B ENSGT00940000157064.a.b.a ENSGT00390000004674.j ENSGT00390000004674.i.a ENSGT00940000154254.b ENSGT00940000154667.b.b ENSGT00950000183208.B.f.b ##22 ENSGT00950000182860.a.a.b.a.a.a.b ##27 ENSGT00940000154801.m.b ENSGT00940000165563.b ENSGT00940000155003.f ENSGT01090000259987.a.b.d.b.a.l ENSGT01090000259987.a.b.d.b.a.k ENSGT00940000155270.j ENSGT00950000183214.a.a.a.a ENSGT00940000156952.a.b Red-bellied piranha MODERN SPECIES 510 ENSPNAG00000017550 ENSPNAG00000017536 PIP4P1 (ENSPNAG00000017529) dnaaf6 (ENSPNAG00000017520) eeig2a (ENSPNAG00000017504) ENSPNAG00000017484 ENSPNAG00000017467 ENSPNAG00000017449 FNDC7 (ENSPNAG00000017431) ENSPNAG00000017404 ENSPNAG00000017374 ZEB1 (ENSPNAG00000017288) ##22 arhgap12a (ENSPNAG00000017260) ##27 KIF5B (ENSPNAG00000017013) ENSPNAG00000016956 epc1b (ENSPNAG00000016937) itgb1b.1 (ENSPNAG00000016909) itgb1b (ENSPNAG00000016842) Mexicana tetra MODERN SPECIES 8 pard3ab (ENSAMXG00000012347) nrp1b (ENSAMXG00000012305) ENSAMXG00000044123 ENSAMXG00000033768 ENSAMXG00000043332 itgb1b (ENSAMXG00000035720) itgb1b.1 (ENSAMXG00000012259) ENSAMXG00000029503 epc1b (ENSAMXG00000012237) ENSAMXG00000025650 ENSAMXG00000029680 ENSAMXG00000031480 ##27 ENSAMXG00000039004 ENSAMXG00000043582 ENSAMXG00000010059 ZEB1 (ENSAMXG00000010069) ##22 ENSAMXG00000010078 ENSAMXG00000038324 GSTM3 (ENSAMXG00000000228) ENSAMXG00000039582 eps8l3b (ENSAMXG00000033958) atp5pb (ENSAMXG00000029023) ENSAMXG00000040859 dnase1l1l (ENSAMXG00000041037) kcnq2a (ENSAMXG00000042966) PREX1 (ENSAMXG00000000207) ENSAMXG00000032531 stk38a (ENSAMXG00000000197) ENSAMXG00000000193 ENSAMXG00000000189 sema3ga (ENSAMXG00000000186) Electric eel MODERN SPECIES 1077 FNDC7 (ENSEEEG00000020012) ENSEEEG00000020009 ENSEEEG00000020003 ##22 ENSEEEG00000020001 Cyprinoidei ANCESTRAL SPECIES 92 ENSGT00980000199221 ENSGT01030000235043 ENSGT00460000041648 ENSGT00940000159035 ENSGT00940000156760.e.a.e.a ENSGT00390000015219 ENSGT00390000003680.a.b ENSGT00940000163212.A ENSGT00940000157783 ENSGT01030000234556.a.b.b ENSGT00940000159936 ENSGT00390000000566 ENSGT00940000159779 ENSGT00940000155795.e ENSGT00940000159520.h.k.a.b.b ENSGT00950000183208.B.f.b ##22 ENSGT00950000182860.a.a.b.a.a.a.b ##27 ENSGT01090000260029.a.b.b.a.a.a.b ENSGT00940000154801.m.b ENSGT00940000165563.b ENSGT00940000155003.f ENSGT01090000259987.a.b.d.b.a.l ENSGT01090000259987.a.b.d.b.a.k ENSGT00940000155270.j ENSGT00950000183214.a.a.a.a ENSGT00940000155408.p ENSGT00940000156952.a.b ENSGT00940000158506 ENSGT00940000159760 ENSGT00530000064699 ENSGT00940000159042 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 63 ENSGT00940000159035.h ENSGT00940000156760.e.a.e.a.a ENSGT00390000015219 ENSGT00390000003680.a.b.b ENSGT00390000003680.a.b.a ENSGT00940000163212.A ENSGT00940000156635.t.b.a ENSGT00940000156635.t.a.b ENSGT00940000157783.k ENSGT01030000234556.a.b.b.c ENSGT00940000159936.a ENSGT00390000000566.db ENSGT00940000159779.b ENSGT00940000155795.e.f ENSGT00940000159520.h.k.a.b.b.a ENSGT00950000183208.B.f.b.q ##22 ENSGT00950000182860.a.a.b.a.a.a.b.a ##27 ENSGT01090000260029.a.b.b.a.a.a.b.a.a Cyprininae_a ANCESTRAL SPECIES 436 ENSGT00730000111912.B.f.a ENSGT00940000159520.h.k.a.b.b.a ENSGT00950000183208.B.f.b.q ##22 ENSGT00950000182860.a.a.b.a.a.a.b.a ##27 ENSGT01090000260029.a.b.b.a.a.a.b.a.a ENSGT01090000260029.a.b.b.a.a.a.b.b.a.a ENSGT00940000154801.m.b.b ENSGT00940000159520.h.k.a.a.a.a.a ENSGT00940000155003.f.b ENSGT01090000259987.a.b.d.b.a.l.a ENSGT01090000259987.a.b.d.b.a.k.c ENSGT00940000155270.j.a ENSGT00950000183214.a.a.a.a.c ENSGT00940000155408.p.b ENSGT01090000260029.a.b.b.a.a.a.b.a.b ENSGT00940000158506.h ENSGT00940000159760.c ENSGT00390000002143.a.k.b Common carp reference MODERN SPECIES 21 mterf4 (ENSCCRG00000031336) ENSCCRG00000044289 ENSCCRG00000044168 dnaaf6 (ENSCCRG00000018478) pip4p1a (ENSCCRG00000018479) ENSCCRG00000065647 zgc:152670 (ENSCCRG00000001267) lig1 (ENSCCRG00000044155) mpz (ENSCCRG00000066643) atp1a2a (ENSCCRG00000060672) sdhc (ENSCCRG00000048761) cadm3 (ENSCCRG00000017976) kirrel1b (ENSCCRG00000031697) ENSCCRG00000056035 ENSCCRG00000037813 ENSCCRG00000039841 ##22 arhgap12a (ENSCCRG00000039878) ##27 ENSCCRG00000029733 ENSCCRG00000062670 ENSCCRG00000011362 epc1b (ENSCCRG00000011359) ENSCCRG00000045265 nrp1b (ENSCCRG00000049850) ENSCCRG00000068507 pard3ab (ENSCCRG00000032744) ENSCCRG00000037345 ENSCCRG00000037354 dnaaf11 (ENSCCRG00000037362) ENSCCRG00000041104 efr3a (ENSCCRG00000039555) adcy8 (ENSCCRG00000033949) Golden-line barbel MODERN SPECIES 619 ENSSGRG00000035330 ENSSGRG00000035331 ZEB1 (ENSSGRG00000035334) ##22 arhgap12a (ENSSGRG00000035351) ##27 ENSSGRG00000036139 ENSSGRG00000036142 KIF5B (ENSSGRG00000036301) ENSSGRG00000036618 ENSSGRG00000036620 ENSSGRG00000036622 epc1b (ENSSGRG00000036624) ENSSGRG00000036626 ITGB1 (ENSSGRG00000036631) nrp1b (ENSSGRG00000036633) pard3ab (ENSSGRG00000036714) ENSSGRG00000038473 ENSSGRG00000038479 dnaaf11 (ENSSGRG00000038510) Goldfish MODERN SPECIES 11 ENSCARG00000008309 gpc1b (ENSCARG00000008318) ENSCARG00000008329 pip4p1a (ENSCARG00000008340) ENSCARG00000008377 zgc:152670 (ENSCARG00000008380) zgc:152670 (ENSCARG00000008389) lig1 (ENSCARG00000008435) mpz (ENSCARG00000008937) atp1a2a (ENSCARG00000009083) sdhc (ENSCARG00000011699) cadm3 (ENSCARG00000011754) kirrel1b (ENSCARG00000011824) ENSCARG00000011910 ENSCARG00000011924 ZEB1 (ENSCARG00000011938) ##22 arhgap12a (ENSCARG00000011963) ##27 ENSCARG00000012240 epc1b (ENSCARG00000012011) KIF5B (ENSCARG00000012344) ITGB1 (ENSCARG00000012932) nrp1b (ENSCARG00000013091) ENSCARG00000013143 ZNF622 (ENSCARG00000013151) acvr1l (ENSCARG00000013161) otomp (ENSCARG00000013173) gpc1b (ENSCARG00000013194) ENSCARG00000013228 SVIL (ENSCARG00000013341) otomp (ENSCARG00000016825) acvr1l (ENSCARG00000016849) Cyprininae ANCESTRAL SPECIES 72 ENSGT00940000156635.t.a.a ENSGT00940000157783.l ENSGT01030000234556.a.b.b.d ENSGT00940000159936.b ENSGT00390000000566.eb ENSGT00940000159779.a ENSGT00940000155795.e.e ENSGT00940000159520.h.k.a.b.a ENSGT00950000183208.B.f.b.r ##22 ENSGT00950000182860.a.a.b.a.a.a.b.b ##27 ENSGT00940000154801.m.b.a ENSGT00940000165563.b ENSGT00940000159520.h.k.a.a.b ENSGT00940000159520.h.k.a.a.a.b.a.a ENSGT00940000155003.f.a ENSGT01090000259987.a.b.d.b.a.l.b ENSGT01090000259987.a.b.d.b.a.k.d ENSGT00940000155270.j.b ENSGT00950000183214.a.a.a.a.d ENSGT00940000155408.p.a ENSGT00940000156952.a.b.b ENSGT00940000158506.g ENSGT00940000159760.d ENSGT00530000064699 Goldfish DUPLICATION Goldfish MODERN SPECIES 19 RASAL2 (ENSCARG00000013301) DYNLT4 (ENSCARG00000013261) plk3 (ENSCARG00000011574) cacybp (ENSCARG00000011482) mrps14 (ENSCARG00000011477) tnn (ENSCARG00000011386) tnr (ENSCARG00000011087) cop1 (ENSCARG00000010861) PAPPA2 (ENSCARG00000010720) ENSCARG00000010693 ASTN1 (ENSCARG00000009504) kirrel1b (ENSCARG00000009307) ENSCARG00000009292 ENSCARG00000009282 ENSCARG00000009264 ENSCARG00000009257 ##22 arhgap12a (ENSCARG00000008968) ##27 KIF5B (ENSCARG00000008772) CREM (ENSCARG00000008720) ENSCARG00000008709 zgc:152670 (ENSCARG00000008682) lig1 (ENSCARG00000007764) gtpbp4 (ENSCARG00000006583) ENSCARG00000006478 ENSCARG00000006468 ENSCARG00000006456 tmem71 (ENSCARG00000006441) ift57 (ENSCARG00000006356) ENSCARG00000006339 ENSCARG00000006292 ENSCARG00000006264 Goldfish MODERN SPECIES 19 CBARP (ENSCARG00000067232) stk11 (ENSCARG00000067259) ENSCARG00000067309 ENSCARG00000067319 dnaaf6 (ENSCARG00000067329) pip4p1a (ENSCARG00000067346) zgc:152670 (ENSCARG00000067373) zgc:152670 (ENSCARG00000067392) lig1 (ENSCARG00000004212) mpz (ENSCARG00000006555) atp1a2a (ENSCARG00000006714) sdhc (ENSCARG00000006841) cadm3 (ENSCARG00000006866) kirrel1b (ENSCARG00000006933) ENSCARG00000007095 ZEB1 (ENSCARG00000007113) ##22 arhgap12a (ENSCARG00000007193) ##27 KIF5B (ENSCARG00000008396) ENSCARG00000008691 ENSCARG00000008703 ENSCARG00000008718 epc1b (ENSCARG00000008742) ITGB1 (ENSCARG00000009116) ITGB1 (ENSCARG00000009391) nrp1b (ENSCARG00000013594) pard3ab (ENSCARG00000013691) ENSCARG00000014006 CREM (ENSCARG00000013979) sbno2a (ENSCARG00000014032) ENSCARG00000014105 ENSCARG00000014121 Cyprininae_a ANCESTRAL SPECIES 479 ENSGT00940000155795.e.e ENSGT00940000159520.h.k.a.b.a ENSGT00950000183208.B.f.b.r ##22 ENSGT00950000182860.a.a.b.a.a.a.b.b ##27 ENSGT01090000260029.a.b.b.a.a.a.b.b.b ENSGT00940000154801.m.b.a ENSGT00940000165563.b ENSGT00940000159520.h.k.a.a.b ENSGT00940000159520.h.k.a.a.a.b.a.a ENSGT00940000155003.f.a ENSGT01090000259987.a.b.d.b.a.l.b ENSGT01090000259987.a.b.d.b.a.k.d ENSGT00940000155270.j.b ENSGT00950000183214.a.a.a.a.d ENSGT00940000155408.p.a ENSGT00940000156952.a.b.b ENSGT00940000158506.g Common carp reference MODERN SPECIES 29 klhl24a (ENSCCRG00000053464) ENSCCRG00000044338 ENSCCRG00000031339 mterf4 (ENSCCRG00000044303) ENSCCRG00000018430 ENSCCRG00000018434 dnaaf6 (ENSCCRG00000013904) pip4p1a (ENSCCRG00000013899) zgc:152670 (ENSCCRG00000044258) lig1 (ENSCCRG00000000733) mpz (ENSCCRG00000044087) atp1a2a (ENSCCRG00000075101) sdhc (ENSCCRG00000034137) cadm3 (ENSCCRG00000031802) kirrel1b (ENSCCRG00000044857) ENSCCRG00000042153 ##22 arhgap12a (ENSCCRG00000074272) ##27 ENSCCRG00000025171 ENSCCRG00000078608 ENSCCRG00000045160 ENSCCRG00000038503 ENSCCRG00000082607 ENSCCRG00000038506 ENSCCRG00000049986 ENSCCRG00000020563 nrp1b (ENSCCRG00000037961) pard3ab (ENSCCRG00000005733) ENSCCRG00000032260 dnaaf11 (ENSCCRG00000032250) KCNQ3 (ENSCCRG00000032233) ENSCCRG00000032219 Golden-line barbel MODERN SPECIES 888 kirrel1b (ENSSGRG00000047327) ENSSGRG00000047329 ZEB1 (ENSSGRG00000047331) ##22 arhgap12a (ENSSGRG00000047347) ##27 ENSSGRG00000047525 ENSSGRG00000047537 KIF5B (ENSSGRG00000047547) ENSSGRG00000047713 ENSSGRG00000047714 ENSSGRG00000047715 epc1b (ENSSGRG00000047717) ITGB1 (ENSSGRG00000047735) nrp1b (ENSSGRG00000048394) pard3ab (ENSSGRG00000048415) ENSSGRG00000048859 CREM (ENSSGRG00000048860) dnaaf11 (ENSSGRG00000048861) Zebrafish MODERN SPECIES 11 ENSDARG00000040741 dnaaf6 (ENSDARG00000038612) pip4p1a (ENSDARG00000038615) ENSDARG00000076512 zgc:152670 (ENSDARG00000017038) lig1 (ENSDARG00000060041) mpz (ENSDARG00000038609) atp1a2a (ENSDARG00000010472) sdhc (ENSDARG00000038608) cadm3 (ENSDARG00000057013) kirrel1b (ENSDARG00000056998) ENSDARG00000093337 si:ch211-195h23.3 (ENSDARG00000068431) ENSDARG00000003244 ENSDARG00000090699 ENSDARG00000016788 ##22 arhgap12a (ENSDARG00000008548) ##27 ftr16 (ENSDARG00000032043) KIF5B (ENSDARG00000074131) ENSDARG00000105141 itgb1b.2 (ENSDARG00000022689) itgb1b.1 (ENSDARG00000053232) epc1b (ENSDARG00000060054) itgb1b (ENSDARG00000104484) ITGB1 (ENSDARG00000109929) nrp1b (ENSDARG00000027290) pard3ab (ENSDARG00000010583) ENSDARG00000023217 ENSDARG00000074118 ftr14 (ENSDARG00000053293) ENSDARG00000079537 Cyclostomata ANCESTRAL SPECIES ENSGT00950000183208.B ##22 Hagfish MODERN SPECIES 607 ENSEBUG00000010265 tapt1b (ENSEBUG00000007908) ENSEBUG00000002031 gins1 (ENSEBUG00000003215) ENSEBUG00000005167 ENSEBUG00000000420 ENSEBUG00000014097 ENSEBUG00000003968 ENSEBUG00000004703 slc35b1 (ENSEBUG00000005582) ENSEBUG00000011711 ENSEBUG00000016161 tcf15 (ENSEBUG00000015840) mars1 (ENSEBUG00000010439) ENSEBUG00000014178 ENSEBUG00000009543 ##22 ENSEBUG00000012177 kif5c (ENSEBUG00000002975) ENSEBUG00000009353 DDHD1 (ENSEBUG00000007289) ENSEBUG00000006918 ENSEBUG00000011918