Hystricomorpha_a	ANCESTRAL SPECIES	66	ENSGT00530000063835.a #7	ENSGT00940000160139 #8	ENSGT01080000257410.C #9	ENSGT01100000263518.A.a.a.a #10	ENSGT00390000007823 #11	ENSGT00390000018730.A #12	ENSGT00940000161930 #13	ENSGT00390000002821 #14	ENSGT00940000155532 #15	ENSGT00390000015162 #16	ENSGT00940000158186 #17	ENSGT00940000156911 #18	ENSGT00940000160406 #19	ENSGT00940000157989.b #20	ENSGT00890000139515 #21	ENSGT00940000153769.G #22	ENSGT00940000159329 #23	ENSGT00940000160093 #24	ENSGT00950000183029.C #25	ENSGT00390000009113.a.a #26	ENSGT00940000161218 #27	ENSGT00940000161518 #28	ENSGT00390000006008 #29	ENSGT00940000160694 #30	ENSGT00410000025596.a.a #31	ENSGT01030000234597.a.b.b.f #32	ENSGT00950000182970.A.b #33	ENSGT00940000156407 #34	ENSGT00390000000732 #35	ENSGT00510000050080 #36	ENSGT00940000162832 #37
Hystricomorpha_b	ANCESTRAL SPECIES	83	ENSGT00530000063835.a #7	ENSGT00940000160139 #8	ENSGT01080000257410.C #9	ENSGT01100000263518.A.a.a.a #10	ENSGT00390000007823 #11	ENSGT00390000018730.A #12	ENSGT00940000161930 #13	ENSGT00390000002821 #14	ENSGT00940000155532 #15	ENSGT00390000015162 #16	ENSGT00940000158186 #17	ENSGT00940000156911 #18	ENSGT00940000160406 #19	ENSGT00940000157989.b #20	ENSGT00890000139515 #21	ENSGT00940000153769.G #22	ENSGT00940000159329 #23	ENSGT00940000160093 #24	ENSGT00950000183029.C #25	ENSGT00390000009113.a.a #26	ENSGT00940000161218 #27	ENSGT00940000161518 #28	ENSGT00390000006008 #29	ENSGT00940000160694 #30	ENSGT00410000025596.a.a #31	ENSGT01030000234597.a.b.b.f #32	ENSGT00950000182970.A.b #33	ENSGT00940000156407 #34	ENSGT00390000000732 #35	ENSGT00510000050080 #36	ENSGT00940000162832 #37
Long-tailed chinchilla	MODERN SPECIES	235	GATA5 (ENSCLAG00000007559) #8	CABLES2 (ENSCLAG00000007291)	SLCO4A1 (ENSCLAG00000007190) #9	NTSR1 (ENSCLAG00000002645) #10	ENSCLAG00000002627 #11	OGFR (ENSCLAG00000008130) #12	ENSCLAG00000007710 #13	ENSCLAG00000007594 #14	DIDO1 (ENSCLAG00000006615) #15	GID8 (ENSCLAG00000006562) #16	SLC17A9 (ENSCLAG00000006378) #17	YTHDF1 (ENSCLAG00000005989) #18	BIRC7 (ENSCLAG00000003588) #19	NKAIN4 (ENSCLAG00000003530) #20	ARFGAP1 (ENSCLAG00000003171) #21	ENSCLAG00000002569 #22	CHRNA4 (ENSCLAG00000002115) #23	KCNQ2 (ENSCLAG00000004205) #24	EEF1A2 (ENSCLAG00000006710) #25	PPDPF (ENSCLAG00000005999) #26	PTK6 (ENSCLAG00000005884) #27	SRMS (ENSCLAG00000005546) #28	FNDC11 (ENSCLAG00000005206) #29	HELZ2 (ENSCLAG00000006292) #30	GMEB2 (ENSCLAG00000005998) #31	STMN3 (ENSCLAG00000004737) #32	RTEL1 (ENSCLAG00000005519) #33	ARFRP1 (ENSCLAG00000004200) #34	ZGPAT (ENSCLAG00000004087) #35	LIME1 (ENSCLAG00000003864) #36	SLC2A4RG (ENSCLAG00000009004) #37
Degu	MODERN SPECIES	235	GATA5 (ENSODEG00000003615) #8	SLCO4A1 (ENSODEG00000004720) #9	NTSR1 (ENSODEG00000004689) #10	MRGBP (ENSODEG00000004674) #11	OGFR (ENSODEG00000004656) #12	ENSODEG00000004588 #13	ENSODEG00000004560	TCFL5 (ENSODEG00000004537) #14	DIDO1 (ENSODEG00000004463) #15	ENSODEG00000004429 #16	SLC17A9 (ENSODEG00000004413) #17	ENSODEG00000004380 #18	BIRC7 (ENSODEG00000004350) #19	NKAIN4 (ENSODEG00000004313) #20	ARFGAP1 (ENSODEG00000004250) #21	ENSODEG00000004143 #22	CHRNA4 (ENSODEG00000004088) #23	KCNQ2 (ENSODEG00000004014) #24	EEF1A2 (ENSODEG00000003948) #25	PPDPF (ENSODEG00000003923) #26	PTK6 (ENSODEG00000007334) #27	SRMS (ENSODEG00000007310) #28	ENSODEG00000007298 #29	HELZ2 (ENSODEG00000007200) #30	ENSODEG00000007154 #31	STMN3 (ENSODEG00000007140) #32	RTEL1 (ENSODEG00000006769) #33	ARFRP1 (ENSODEG00000006629) #34	ENSODEG00000006608	ZGPAT (ENSODEG00000006562) #35	LIME1 (ENSODEG00000006535) #36