Vertebrata	ANCESTRAL SPECIES	1147															ENSGT00390000011067.B	ENSGT00950000183176.b #22
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES	37	ENSGT00940000162251	ENSGT00940000162619	ENSGT00390000011730	ENSGT00940000158140	ENSGT00940000164598	ENSGT00390000002407.d	ENSGT00390000006738.a	ENSGT00390000007838	ENSGT00700000104539.b.a	ENSGT00970000197463	ENSGT00390000010285.d ##19	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22
Euteleostomi	ANCESTRAL SPECIES	26	ENSGT00390000007597 #7	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164066 #24	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824	ENSGT00940000154968	ENSGT00950000182992.a.b.b
Sarcopterygii	ANCESTRAL SPECIES	37	ENSGT00390000007597 #7	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164066 #24	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a	ENSGT00940000154968	ENSGT00950000182992.a.b.b
Tetrapoda	ANCESTRAL SPECIES	1	ENSGT00390000007597 #7	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a	ENSGT00940000154968
Amniota	ANCESTRAL SPECIES	3	ENSGT00390000007597 #7	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Mammalia	ANCESTRAL SPECIES	3	ENSGT00390000007597 #7	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Theria	ANCESTRAL SPECIES	7	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Eutheria	ANCESTRAL SPECIES	15	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Boreoeutheria	ANCESTRAL SPECIES	19	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT01030000234950	ENSGT00510000055281 #20	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00910000147407	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36
Euarchontoglires	ANCESTRAL SPECIES	19	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT01030000234950	ENSGT00510000055281 #20	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00910000147407	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36
Primates	ANCESTRAL SPECIES	20	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT01030000234950	ENSGT00510000055281 #20	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00910000147407	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36
Haplorrhini	ANCESTRAL SPECIES	19	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00910000147407	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Simiiformes	ANCESTRAL SPECIES	20	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00510000055281 #20	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00910000147407	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000009546.b
Catarrhini	ANCESTRAL SPECIES	15	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00390000008294.e.a #14	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00510000055281 #20	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00910000147407	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00910000147562 #35	ENSGT00940000157532 #36
Hominoidea	ANCESTRAL SPECIES	14	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00390000008294.e.a.r #14	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c.`c.a #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00910000147562 #35	ENSGT00940000157532 #36	ENSGT00390000009546.b
Hominidae	ANCESTRAL SPECIES	15	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00390000008294.e.a.r #14	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c.`c.a #19	ENSGT00510000055281 #20	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00910000147562 #35	ENSGT00940000157532 #36	ENSGT00390000009546.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	13	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00390000008294.e.a.r #14	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00910000148603 #18	ENSGT00390000010285.c.`c.a #19	ENSGT00510000055281 #20	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00910000147562 #35	ENSGT00940000157532 #36	ENSGT00390000009546.b
Gorilla	MODERN SPECIES	21	INTS8 (ENSGGOG00000005424) #7	DPY19L4 (ENSGGOG00000014179) #8	ESRP1 (ENSGGOG00000003627) #9	VIRMA (ENSGGOG00000006855) #10	RAD54B (ENSGGOG00000023516) #11	GEM (ENSGGOG00000013020) #12	CDH17 (ENSGGOG00000012331) #13	ENSGGOG00000036876 #14	PDP1 (ENSGGOG00000027042) #15	TMEM67 (ENSGGOG00000027426) #16	RBM12B (ENSGGOG00000011909) #17	ENSGGOG00000022248 #18	CIBAR1 (ENSGGOG00000006452) #19	ENSGGOG00000025746 #20	TRIQK (ENSGGOG00000041672) #21	RUNX1T1 (ENSGGOG00000002874) #22	SLC26A7 (ENSGGOG00000006440) #23	LRRC69 (ENSGGOG00000010204) #24	OTUD6B (ENSGGOG00000015833) #25	PIP4P2 (ENSGGOG00000017181) #26	C8orf88 (ENSGGOG00000036457) #27	NECAB1 (ENSGGOG00000000011) #28	TMEM64 (ENSGGOG00000023552) #29	CALB1 (ENSGGOG00000004938) #30	DECR1 (ENSGGOG00000002614) #31	NBN (ENSGGOG00000027731) #32	OSGIN2 (ENSGGOG00000003696) #33	RIPK2 (ENSGGOG00000010840) #34	ENSGGOG00000042581 #35	MMP16 (ENSGGOG00000027756) #36	ENSGGOG00000042950 #37
Homo/Pan group	ANCESTRAL SPECIES	12	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00390000008294.e.a.r #14	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00910000148603 #18	ENSGT00390000010285.c.`c.a #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00910000147562 #35	ENSGT00940000157532 #36	ENSGT00390000009546.b
Human	MODERN SPECIES	20	NDUFAF6 (ENSG00000156170)	CCNE2 (ENSG00000175305)	INTS8 (ENSG00000164941) #7	DPY19L4 (ENSG00000156162) #8	ESRP1 (ENSG00000104413) #9	VIRMA (ENSG00000164944) #10	FSBP (ENSG00000265817)	RAD54B (ENSG00000197275) #11	GEM (ENSG00000164949) #12	CDH17 (ENSG00000079112) #13	PDP1 (ENSG00000164951) #15	TMEM67 (ENSG00000164953) #16	RBM12B (ENSG00000183808) #17	CIBAR1 (ENSG00000188343) #19	TRIQK (ENSG00000205133) #21	RUNX1T1 (ENSG00000079102) #22	SLC26A7 (ENSG00000147606) #23	LRRC69 (ENSG00000214954) #24	OTUD6B (ENSG00000155100) #25	PIP4P2 (ENSG00000155099) #26	C8orf88 (ENSG00000253250) #27	NECAB1 (ENSG00000123119) #28	TMEM64 (ENSG00000180694) #29	CALB1 (ENSG00000104327) #30	DECR1 (ENSG00000104325) #31	NBN (ENSG00000104320) #32	OSGIN2 (ENSG00000164823) #33	RIPK2 (ENSG00000104312) #34	MMP16 (ENSG00000156103) #36	DCAF4L2 (ENSG00000176566)	CNBD1 (ENSG00000176571)
Pan	ANCESTRAL SPECIES	11	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00390000008294.e.a.r #14	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00910000148603 #18	ENSGT00390000010285.c.`c.a #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00910000147562 #35	ENSGT00940000157532 #36	ENSGT00910000147912 #37
Chimpanzee	MODERN SPECIES	21	INTS8 (ENSPTRG00000020432) #7	DPY19L4 (ENSPTRG00000020431) #8	ESRP1 (ENSPTRG00000020430) #9	VIRMA (ENSPTRG00000020428) #10	RAD54B (ENSPTRG00000020427) #11	GEM (ENSPTRG00000020426) #12	CDH17 (ENSPTRG00000020425) #13	ENSPTRG00000049145 #14	PDP1 (ENSPTRG00000020424) #15	ENSPTRG00000050680	TMEM67 (ENSPTRG00000020422) #16	RBM12B (ENSPTRG00000020420) #17	ENSPTRG00000050149 #18	ENSPTRG00000044420 #19	TRIQK (ENSPTRG00000049470) #21	RUNX1T1 (ENSPTRG00000020416) #22	SLC26A7 (ENSPTRG00000033891) #23	LRRC69 (ENSPTRG00000020414) #24	OTUD6B (ENSPTRG00000020413) #25	PIP4P2 (ENSPTRG00000020412) #26	C8H8orf88 (ENSPTRG00000046842) #27	NECAB1 (ENSPTRG00000020411) #28	TMEM64 (ENSPTRG00000020410) #29	CALB1 (ENSPTRG00000020409) #30	DECR1 (ENSPTRG00000020408) #31	NBN (ENSPTRG00000020407) #32	OSGIN2 (ENSPTRG00000020406) #33	RIPK2 (ENSPTRG00000020405) #34	ENSPTRG00000043455 #35	MMP16 (ENSPTRG00000020403) #36	ENSPTRG00000052318 #37
Bonobo	MODERN SPECIES	21	CCNE2 (ENSPPAG00000028603)	INTS8 (ENSPPAG00000033161) #7	DPY19L4 (ENSPPAG00000039378) #8	ESRP1 (ENSPPAG00000037294) #9	VIRMA (ENSPPAG00000032721) #10	RAD54B (ENSPPAG00000029572) #11	GEM (ENSPPAG00000024586) #12	CDH17 (ENSPPAG00000036344) #13	ENSPPAG00000035912 #14	PDP1 (ENSPPAG00000026907) #15	ENSPPAG00000012789	TMEM67 (ENSPPAG00000029467) #16	ENSPPAG00000042794 #18	CIBAR1 (ENSPPAG00000042855) #19	TRIQK (ENSPPAG00000002158) #21	RUNX1T1 (ENSPPAG00000031370) #22	SLC26A7 (ENSPPAG00000013458) #23	LRRC69 (ENSPPAG00000006380) #24	OTUD6B (ENSPPAG00000039145) #25	PIP4P2 (ENSPPAG00000034867) #26	C8orf88 (ENSPPAG00000022982) #27	ENSPPAG00000041684 #28	TMEM64 (ENSPPAG00000032620) #29	CALB1 (ENSPPAG00000042566) #30	DECR1 (ENSPPAG00000036153) #31	NBN (ENSPPAG00000019456) #32	OSGIN2 (ENSPPAG00000030450) #33	RIPK2 (ENSPPAG00000044025) #34	ENSPPAG00000035897 #35	MMP16 (ENSPPAG00000010941) #36	ENSPPAG00000029533
Orangutan	MODERN SPECIES	21	TP53INP1 (ENSPPYG00000040092)	CCNE2 (ENSPPYG00000018757)	INTS8 (ENSPPYG00000018756) #7	DPY19L4 (ENSPPYG00000018755) #8	ESRP1 (ENSPPYG00000018753) #9	ENSPPYG00000037538	VIRMA (ENSPPYG00000018751) #10	RAD54B (ENSPPYG00000018750) #11	GEM (ENSPPYG00000018749) #12	CDH17 (ENSPPYG00000018748) #13	PDP1 (ENSPPYG00000018747) #15	TMEM67 (ENSPPYG00000018746) #16	RBM12B (ENSPPYG00000018745) #17	CIBAR1 (ENSPPYG00000018744) #19	TRIQK (ENSPPYG00000018743) #21	RUNX1T1 (ENSPPYG00000018741) #22	SLC26A7 (ENSPPYG00000018740) #23	LRRC69 (ENSPPYG00000018739) #24	OTUD6B (ENSPPYG00000018738) #25	PIP4P2 (ENSPPYG00000018737) #26	C8orf88 (ENSPPYG00000034958) #27	NECAB1 (ENSPPYG00000018736) #28	TMEM64 (ENSPPYG00000018735) #29	CALB1 (ENSPPYG00000018734) #30	DECR1 (ENSPPYG00000018733) #31	NBN (ENSPPYG00000018732) #32	OSGIN2 (ENSPPYG00000018731) #33	RIPK2 (ENSPPYG00000018730) #34	MMP16 (ENSPPYG00000018729) #36	DCAF4L2 (ENSPPYG00000018728)	CNBD1 (ENSPPYG00000018727)
Gibbon	MODERN SPECIES	6	CCNE2 (ENSNLEG00000003483)	INTS8 (ENSNLEG00000003354) #7	DPY19L4 (ENSNLEG00000003347) #8	ESRP1 (ENSNLEG00000003241) #9	VIRMA (ENSNLEG00000003151) #10	RAD54B (ENSNLEG00000003062) #11	GEM (ENSNLEG00000003045) #12	CDH17 (ENSNLEG00000002974) #13	PDP1 (ENSNLEG00000002967) #15	ENSNLEG00000033649	TMEM67 (ENSNLEG00000002783) #16	RBM12B (ENSNLEG00000032050) #17	ENSNLEG00000002773 ##19	TRIQK (ENSNLEG00000002765) #21	ENSNLEG00000027770 #20	RUNX1T1 (ENSNLEG00000002658) #22	SLC26A7 (ENSNLEG00000002502) #23	ENSNLEG00000002467	OTUD6B (ENSNLEG00000002420) #25	PIP4P2 (ENSNLEG00000002397) #26	C8orf88 (ENSNLEG00000002396) #27	NECAB1 (ENSNLEG00000002344) #28	TMEM64 (ENSNLEG00000002330) #29	CALB1 (ENSNLEG00000002245) #30	DECR1 (ENSNLEG00000029920) #31	NBN (ENSNLEG00000002033) #32	ENSNLEG00000002024 #33	RIPK2 (ENSNLEG00000001895) #34	ENSNLEG00000032270 #35	MMP16 (ENSNLEG00000027127) #36	DCAF4L2 (ENSNLEG00000019002)
Cercopithecidae	ANCESTRAL SPECIES	14	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00390000008294.e.a #14	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00910000147407	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00910000147562 #35	ENSGT00940000157532 #36
Cercopithecinae	ANCESTRAL SPECIES	16	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00390000008294.e.a #14	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00910000147407	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00910000147562 #35	ENSGT00940000157532 #36
Cercopithecinae_a	ANCESTRAL SPECIES	15	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00390000008294.e.a #14	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00910000147407	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00910000147562 #35	ENSGT00940000157532 #36
Cercopithecinae_b	ANCESTRAL SPECIES	9	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00390000008294.e.a #14	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00910000147407	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Olive baboon	MODERN SPECIES	18	VIRMA (ENSPANG00000017809) #10	ENSPANG00000002488	RAD54B (ENSPANG00000019566) #11	ENSPANG00000043038	GEM (ENSPANG00000017240) #12	CDH17 (ENSPANG00000017130) #13	PDP1 (ENSPANG00000011147) #15	TMEM67 (ENSPANG00000009489) #16	RBM12B (ENSPANG00000035535) #17	CIBAR1 (ENSPANG00000024158) #19	ENSPANG00000051317	TRIQK (ENSPANG00000029780) #21	ENSPANG00000038084 #20	ENSPANG00000050255	ENSPANG00000041246	RUNX1T1 (ENSPANG00000004755) #22	SLC26A7 (ENSPANG00000010066) #23	ENSPANG00000051009	ENSPANG00000051163	OTUD6B (ENSPANG00000022969) #25	PIP4P2 (ENSPANG00000005208) #26	C8orf88 (ENSPANG00000045847) #27	ENSPANG00000040997	NECAB1 (ENSPANG00000016561) #28	TMEM64 (ENSPANG00000009061) #29	ENSPANG00000043211	ENSPANG00000040984	ENSPANG00000047622	CALB1 (ENSPANG00000016822) #30	DECR1 (ENSPANG00000016824) #31	NBN (ENSPANG00000011020) #32
Cercopithecinae_d	ANCESTRAL SPECIES	92	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00390000008294.e.a #14	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22
Drill	MODERN SPECIES	744	TP53INP1 (ENSMLEG00000033824)	CCNE2 (ENSMLEG00000031183)	INTS8 (ENSMLEG00000036088) #7	DPY19L4 (ENSMLEG00000041642) #8	ESRP1 (ENSMLEG00000015475) #9	VIRMA (ENSMLEG00000033647) #10	RAD54B (ENSMLEG00000006946) #11	GEM (ENSMLEG00000030970) #12	CDH17 (ENSMLEG00000025852) #13	ENSMLEG00000026827 #14	PDP1 (ENSMLEG00000039161) #15	TMEM67 (ENSMLEG00000035574) #16	RBM12B (ENSMLEG00000037288) #17	ENSMLEG00000043029 #19	TRIQK (ENSMLEG00000030472) #21	RUNX1T1 (ENSMLEG00000034551) #22
Sooty mangabey	MODERN SPECIES	658	CCNE2 (ENSCATG00000045094)	INTS8 (ENSCATG00000035060) #7	DPY19L4 (ENSCATG00000017771) #8	ESRP1 (ENSCATG00000038739) #9	VIRMA (ENSCATG00000043446) #10	RAD54B (ENSCATG00000030661) #11	ENSCATG00000043242	GEM (ENSCATG00000032814) #12	CDH17 (ENSCATG00000032530) #13	ENSCATG00000039742 #14	PDP1 (ENSCATG00000026851) #15	TMEM67 (ENSCATG00000038457) #16	RBM12B (ENSCATG00000030769) #17	CIBAR1 (ENSCATG00000012539) #19	TRIQK (ENSCATG00000031074) #21	RUNX1T1 (ENSCATG00000016868) #22
Macaca	ANCESTRAL SPECIES	14	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00910000147407	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00910000147562 #35	ENSGT00940000157532 #36
Macaca_a	ANCESTRAL SPECIES	16	ENSGT00510000048688	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000009546.b	ENSGT00390000001688	ENSGT00530000062932.c.a.a.a.b.a.d
Rhesus	MODERN SPECIES	18	CCNE2 (ENSMMUG00000005358)	INTS8 (ENSMMUG00000005356) #7	DPY19L4 (ENSMMUG00000021113) #8	ESRP1 (ENSMMUG00000021112) #9	VIRMA (ENSMMUG00000012981) #10	ENSMMUG00000061159	FSBP (ENSMMUG00000052407)	RAD54B (ENSMMUG00000005659) #11	GEM (ENSMMUG00000062934) #12	CDH17 (ENSMMUG00000020010) #13	ENSMMUG00000047716	PDP1 (ENSMMUG00000004568) #15	TMEM67 (ENSMMUG00000005561) #16	RBM12B (ENSMMUG00000005558) #17	CIBAR1 (ENSMMUG00000005557) #19	RUNX1T1 (ENSMMUG00000023115) #22	SLC26A7 (ENSMMUG00000019481) #23	OTUD6B (ENSMMUG00000013396) #25	PIP4P2 (ENSMMUG00000051364) #26	C8H8orf88 (ENSMMUG00000049102) #27	NECAB1 (ENSMMUG00000013392) #28	TMEM64 (ENSMMUG00000004011) #29	ENSMMUG00000061241	CALB1 (ENSMMUG00000006664) #30	DECR1 (ENSMMUG00000006663) #31	NBN (ENSMMUG00000014519) #32	OSGIN2 (ENSMMUG00000014518) #33	RIPK2 (ENSMMUG00000020725) #34	ENSMMUG00000051248	ENSMMUG00000058939	ENSMMUG00000055409
Crab-eating macaque	MODERN SPECIES	18	ENSMFAG00000061242	ENSMFAG00000063260	DPY19L4 (ENSMFAG00000001092) #8	ESRP1 (ENSMFAG00000031577) #9	VIRMA (ENSMFAG00000041706) #10	RAD54B (ENSMFAG00000031629) #11	ENSMFAG00000056677	GEM (ENSMFAG00000028496) #12	CDH17 (ENSMFAG00000000602) #13	PDP1 (ENSMFAG00000030624) #15	ENSMFAG00000048314	TMEM67 (ENSMFAG00000002808) #16	RBM12B (ENSMFAG00000045430) #17	CIBAR1 (ENSMFAG00000032627) #19	ENSMFAG00000049024	RUNX1T1 (ENSMFAG00000032522) #22	SLC26A7 (ENSMFAG00000000973) #23	ENSMFAG00000042385	PIP4P2 (ENSMFAG00000044582) #26	C8orf88 (ENSMFAG00000051204) #27	NECAB1 (ENSMFAG00000033460) #28	TMEM64 (ENSMFAG00000032042) #29	CALB1 (ENSMFAG00000000695) #30	DECR1 (ENSMFAG00000032034) #31	NBN (ENSMFAG00000030845) #32	OSGIN2 (ENSMFAG00000024999) #33	RIPK2 (ENSMFAG00000020312) #34	ENSMFAG00000058950	ENSMFAG00000064756	ENSMFAG00000058335	ENSMFAG00000064631
Pig-tailed macaque	MODERN SPECIES	248	CCNE2 (ENSMNEG00000035282)	INTS8 (ENSMNEG00000032790) #7	DPY19L4 (ENSMNEG00000032177) #8	ESRP1 (ENSMNEG00000034691) #9	ENSMNEG00000028615	VIRMA (ENSMNEG00000041558) #10	RAD54B (ENSMNEG00000016408) #11	GEM (ENSMNEG00000042526) #12	CDH17 (ENSMNEG00000030028) #13	PDP1 (ENSMNEG00000033800) #15	TMEM67 (ENSMNEG00000041340) #16	RBM12B (ENSMNEG00000041292) #17	CIBAR1 (ENSMNEG00000034831) #19	TRIQK (ENSMNEG00000030105) #21	ENSMNEG00000017861 #20	RUNX1T1 (ENSMNEG00000042108) #22	SLC26A7 (ENSMNEG00000036565) #23	LRRC69 (ENSMNEG00000036795) #24	PIP4P2 (ENSMNEG00000028141) #26	C8orf88 (ENSMNEG00000034857) #27	ENSMNEG00000007927	NECAB1 (ENSMNEG00000030803) #28	TMEM64 (ENSMNEG00000038153) #29	CALB1 (ENSMNEG00000029962) #30	DECR1 (ENSMNEG00000041490) #31	NBN (ENSMNEG00000042800) #32	OSGIN2 (ENSMNEG00000032616) #33	RIPK2 (ENSMNEG00000042090) #34	ENSMNEG00000004986 #35	MMP16 (ENSMNEG00000003965) #36	DCAF4L2 (ENSMNEG00000015640)
Vervet Monkey	MODERN SPECIES	27	DPY19L4 (ENSCSAG00000012593) #8	ESRP1 (ENSCSAG00000012644) #9	VIRMA (ENSCSAG00000012660) #10	FSBP (ENSCSAG00000012665)	RAD54B (ENSCSAG00000012712) #11	ENSCSAG00000018591	GEM (ENSCSAG00000012731) #12	CDH17 (ENSCSAG00000012742) #13	PDP1 (ENSCSAG00000012754) #15	TMEM67 (ENSCSAG00000012763) #16	ENSCSAG00000018560	RBM12B (ENSCSAG00000018559) #17	CIBAR1 (ENSCSAG00000012774) #19	TRIQK (ENSCSAG00000012785) #21	ENSCSAG00000018558 #20	RUNX1T1 (ENSCSAG00000012793) #22	SLC26A7 (ENSCSAG00000012805) #23	ENSCSAG00000012826	OTUD6B (ENSCSAG00000012837) #25	PIP4P2 (ENSCSAG00000012840) #26	C8orf88 (ENSCSAG00000012848) #27	NECAB1 (ENSCSAG00000012856) #28	ENSCSAG00000012866 #29	CALB1 (ENSCSAG00000012874) #30	DECR1 (ENSCSAG00000012885) #31	NBN (ENSCSAG00000012900) #32	OSGIN2 (ENSCSAG00000012906) #33	RIPK2 (ENSCSAG00000012911) #34	MMP16 (ENSCSAG00000012941) #36	CNGB3 (ENSCSAG00000012992)	CPNE3 (ENSCSAG00000013015)
Rhinopithecus	ANCESTRAL SPECIES	377			ENSGT00390000007597.a #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00940000153607.c.a	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22
Black snub-nosed monkey	MODERN SPECIES	1320	PLBD2 (ENSRBIG00000031710)	SDS (ENSRBIG00000032749)	SDSL (ENSRBIG00000044033)	LHX5 (ENSRBIG00000044370)	RBM19 (ENSRBIG00000041419)	TBX5 (ENSRBIG00000033482)	TBX3 (ENSRBIG00000033935)	GEM (ENSRBIG00000028966) #12	CDH17 (ENSRBIG00000039486) #13	PDP1 (ENSRBIG00000040244) #15	ENSRBIG00000037246	TMEM67 (ENSRBIG00000036988) #16	RBM12B (ENSRBIG00000035046) #17	CIBAR1 (ENSRBIG00000034177) #19	TRIQK (ENSRBIG00000036626) #21	RUNX1T1 (ENSRBIG00000038431) #22
Golden snub-nosed monkey	MODERN SPECIES	2844																RUNX1T1 (ENSRROG00000033161) #22
Platyrrhini	ANCESTRAL SPECIES	17	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00940000154349.m.a.b	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00910000147407	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000009546.b
Cebidae	ANCESTRAL SPECIES	19	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00940000154349.m.a.b	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00910000147407	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000009546.b
Cebidae_a	ANCESTRAL SPECIES	61	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00940000154349.m.a.b	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00910000147407	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Capuchin	MODERN SPECIES	109	ENSCCAG00000028912	DPY19L4 (ENSCCAG00000032282) #8	ENSCCAG00000028859	ESRP1 (ENSCCAG00000021066) #9	ENSCCAG00000009664	VIRMA (ENSCCAG00000036600) #10	RAD54B (ENSCCAG00000011754) #11	GEM (ENSCCAG00000005600) #12	CDH17 (ENSCCAG00000028997) #13	ENSCCAG00000033599	PDP1 (ENSCCAG00000036931) #15	ENSCCAG00000021460	TMEM67 (ENSCCAG00000026829) #16	CIBAR1 (ENSCCAG00000034321) #19	TRIQK (ENSCCAG00000021343) #21	RUNX1T1 (ENSCCAG00000025365) #22	SLC26A7 (ENSCCAG00000017342) #23	LRRC69 (ENSCCAG00000032597) #24	OTUD6B (ENSCCAG00000027195) #25	PIP4P2 (ENSCCAG00000026867) #26	C8orf88 (ENSCCAG00000033667) #27	NECAB1 (ENSCCAG00000037535) #28	ENSCCAG00000032801	TMEM64 (ENSCCAG00000038025) #29	CALB1 (ENSCCAG00000021895) #30	DECR1 (ENSCCAG00000035367) #31	ENSCCAG00000035563	NBN (ENSCCAG00000033734) #32	OSGIN2 (ENSCCAG00000023678) #33	ENSCCAG00000019049	RIPK2 (ENSCCAG00000030865) #34
Bolivian squirrel monkey	MODERN SPECIES	149	ESRP1 (ENSSBOG00000032197) #9	ENSSBOG00000024983	VIRMA (ENSSBOG00000009952) #10	RAD54B (ENSSBOG00000028501) #11	GEM (ENSSBOG00000025054) #12	CDH17 (ENSSBOG00000019928) #13	ENSSBOG00000028103	PDP1 (ENSSBOG00000030441) #15	ENSSBOG00000013924	TMEM67 (ENSSBOG00000023940) #16	RBM12B (ENSSBOG00000027592) #17	CIBAR1 (ENSSBOG00000030888) #19	ENSSBOG00000034947	TRIQK (ENSSBOG00000003358) #21	ENSSBOG00000023801 #20	RUNX1T1 (ENSSBOG00000030020) #22
Marmoset	MODERN SPECIES	7	ENSCJAG00000056343	DPY19L4 (ENSCJAG00000000034) #8	ESRP1 (ENSCJAG00000000043) #9	VIRMA (ENSCJAG00000000064) #10	RAD54B (ENSCJAG00000000080) #11	GEM (ENSCJAG00000000088) #12	CDH17 (ENSCJAG00000000090) #13	ENSCJAG00000075221	PDP1 (ENSCJAG00000053295) #15	TMEM67 (ENSCJAG00000000105) #16	RBM12B (ENSCJAG00000000124) #17	CIBAR1 (ENSCJAG00000000126) #19	ENSCJAG00000000131	ENSCJAG00000012130	TRIQK (ENSCJAG00000038595) #21	RUNX1T1 (ENSCJAG00000000144) #22	SLC26A7 (ENSCJAG00000087303) #23	OTUD6B (ENSCJAG00000037181) #25	ENSCJAG00000076896	PIP4P2 (ENSCJAG00000068336) #26	C8orf88 (ENSCJAG00000074082) #27	NECAB1 (ENSCJAG00000000187) #28	TMEM64 (ENSCJAG00000045533) #29	ENSCJAG00000080116	CALB1 (ENSCJAG00000000196) #30	DECR1 (ENSCJAG00000000199) #31	NBN (ENSCJAG00000000205) #32	OSGIN2 (ENSCJAG00000064348) #33	ENSCJAG00000053631	RIPK2 (ENSCJAG00000043196) #34	ENSCJAG00000081917
Mas night monkey	MODERN SPECIES	700														RAD54B (ENSANAG00000019528) #11	TRIQK (ENSANAG00000022251) #21	RUNX1T1 (ENSANAG00000026684) #22
Tarsier	MODERN SPECIES	6236																RUNX1T1 (ENSTSYG00000014406) #22
Strepsirrhini	ANCESTRAL SPECIES	15	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT01030000234950	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Lemuriformes	ANCESTRAL SPECIES	24	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT01030000234950	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Lemuriformes_a	ANCESTRAL SPECIES	46	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT01030000234950	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Greater bamboo lemur	MODERN SPECIES	27	TP53INP1 (ENSPSMG00000018946)	CCNE2 (ENSPSMG00000018924)	INTS8 (ENSPSMG00000018853) #7	DPY19L4 (ENSPSMG00000018792) #8	ESRP1 (ENSPSMG00000018737) #9	ENSPSMG00000018677 #10	RAD54B (ENSPSMG00000018667) #11	GEM (ENSPSMG00000018645) #12	CDH17 (ENSPSMG00000018613) #13	PDP1 (ENSPSMG00000018574) #15	TMEM67 (ENSPSMG00000018566) #16	RBM12B (ENSPSMG00000018547) #17	CIBAR1 (ENSPSMG00000018531) #19	TRIQK (ENSPSMG00000018489) #21	ENSPSMG00000018479 #20	RUNX1T1 (ENSPSMG00000018149) #22	SLC26A7 (ENSPSMG00000017864) #23
Coquerels sifaka	MODERN SPECIES	288	NDUFAF6 (ENSPCOG00000027319)	TP53INP1 (ENSPCOG00000023641)	CCNE2 (ENSPCOG00000014969)	INTS8 (ENSPCOG00000020141) #7	DPY19L4 (ENSPCOG00000015925) #8	ESRP1 (ENSPCOG00000024697) #9	ENSPCOG00000027926	VIRMA (ENSPCOG00000018311) #10	RAD54B (ENSPCOG00000026845) #11	CDH17 (ENSPCOG00000017142) #13	PDP1 (ENSPCOG00000018400) #15	TMEM67 (ENSPCOG00000024483) #16	RBM12B (ENSPCOG00000023546) #17	CIBAR1 (ENSPCOG00000026231) #19	ENSPCOG00000001560	RUNX1T1 (ENSPCOG00000018823) #22	SLC26A7 (ENSPCOG00000013146) #23	LRRC69 (ENSPCOG00000023910) #24	OTUD6B (ENSPCOG00000008763) #25	PIP4P2 (ENSPCOG00000028801) #26	C8orf88 (ENSPCOG00000009495) #27	NECAB1 (ENSPCOG00000017506) #28	TMEM64 (ENSPCOG00000022325) #29	CALB1 (ENSPCOG00000014227) #30	DECR1 (ENSPCOG00000019561) #31	ENSPCOG00000023268	ENSPCOG00000001922 #32	OSGIN2 (ENSPCOG00000016333) #33	RIPK2 (ENSPCOG00000024471) #34	ENSPCOG00000016166	ENSPCOG00000018604
Mouse lemur	MODERN SPECIES	31	TP53INP1 (ENSMICG00000047023)	CCNE2 (ENSMICG00000015598)	INTS8 (ENSMICG00000015571) #7	DPY19L4 (ENSMICG00000034944) #8	ESRP1 (ENSMICG00000008757) #9	VIRMA (ENSMICG00000002218) #10	FSBP (ENSMICG00000035643)	RAD54B (ENSMICG00000000754) #11	GEM (ENSMICG00000043148) #12	CDH17 (ENSMICG00000015201) #13	PDP1 (ENSMICG00000015194) #15	TMEM67 (ENSMICG00000015167) #16	RBM12B (ENSMICG00000036969) #17	CIBAR1 (ENSMICG00000006797) #19	TRIQK (ENSMICG00000046319) #21	RUNX1T1 (ENSMICG00000015825) #22	SLC26A7 (ENSMICG00000012285) #23	LRRC69 (ENSMICG00000027375) #24	ENSMICG00000012278 #25	PIP4P2 (ENSMICG00000012276) #26	C8orf88 (ENSMICG00000041689) #27	NECAB1 (ENSMICG00000034070) #28	TMEM64 (ENSMICG00000028722) #29	CALB1 (ENSMICG00000010459) #30	DECR1 (ENSMICG00000010454) #31	NBN (ENSMICG00000010449) #32	OSGIN2 (ENSMICG00000033226) #33	ENSMICG00000045235	RIPK2 (ENSMICG00000007408) #34	ENSMICG00000041489	ENSMICG00000036676
Bushbaby	MODERN SPECIES	119	DPY19L4 (ENSOGAG00000001710) #8	ESRP1 (ENSOGAG00000000917) #9	ENSOGAG00000025900	VIRMA (ENSOGAG00000013555) #10	RAD54B (ENSOGAG00000007854) #11	FSBP (ENSOGAG00000007859)	GEM (ENSOGAG00000007849) #12	CDH17 (ENSOGAG00000002985) #13	PDP1 (ENSOGAG00000002984) #15	TMEM67 (ENSOGAG00000002980) #16	RBM12B (ENSOGAG00000002979) #17	CIBAR1 (ENSOGAG00000002972) #19	ENSOGAG00000029864	ENSOGAG00000027889	TRIQK (ENSOGAG00000009459) #21	RUNX1T1 (ENSOGAG00000012411) #22	ENSOGAG00000015022	SLC26A7 (ENSOGAG00000005224) #23	OTUD6B (ENSOGAG00000011298) #25	PIP4P2 (ENSOGAG00000011296) #26	NECAB1 (ENSOGAG00000008481) #28	TMEM64 (ENSOGAG00000008478) #29	CALB1 (ENSOGAG00000002418) #30	DECR1 (ENSOGAG00000002417) #31	ENSOGAG00000002416 #32	OSGIN2 (ENSOGAG00000024574) #33	RIPK2 (ENSOGAG00000012627) #34	ENSOGAG00000030962	MMP16 (ENSOGAG00000002718) #36	ENSOGAG00000024480	CNGB3 (ENSOGAG00000012116)
Euarchontoglires_A	ANCESTRAL SPECIES	19	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Tree shrew	MODERN SPECIES	2704																RUNX1T1 (ENSTBEG00000010312) #22	SLC26A7 (ENSTBEG00000017419) #23	OTUD6B (ENSTBEG00000017070) #25	PIP4P2 (ENSTBEG00000016767) #26
Glires	ANCESTRAL SPECIES	20	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Lagomorpha	ANCESTRAL SPECIES	638															ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22
Rabbit	MODERN SPECIES	14	CCNE2 (ENSOCUG00000005398)	INTS8 (ENSOCUG00000005386) #7	DPY19L4 (ENSOCUG00000001317) #8	ESRP1 (ENSOCUG00000001316) #9	VIRMA (ENSOCUG00000016495) #10	RAD54B (ENSOCUG00000016478) #11	GEM (ENSOCUG00000001030) #12	CDH17 (ENSOCUG00000001029) #13	PDP1 (ENSOCUG00000003939) #15	TMEM67 (ENSOCUG00000010390) #16	RBM12B (ENSOCUG00000010353) #17	CIBAR1 (ENSOCUG00000010331) #19	ENSOCUG00000039147	TRIQK (ENSOCUG00000034527) #21	ENSOCUG00000022069	RUNX1T1 (ENSOCUG00000003754) #22	ENSOCUG00000027627	SLC26A7 (ENSOCUG00000012527) #23	LRRC69 (ENSOCUG00000028994) #24	OTUD6B (ENSOCUG00000000218) #25	ENSOCUG00000000723 #26	ENSOCUG00000030280 #27	ENSOCUG00000023574	NECAB1 (ENSOCUG00000001277) #28	ENSOCUG00000006890	ENSOCUG00000021479	ENSOCUG00000006341 #30	ENSOCUG00000006333 #31	NBN (ENSOCUG00000009935) #32	OSGIN2 (ENSOCUG00000009931) #33	ENSOCUG00000030509
Pika	MODERN SPECIES	4222																RUNX1T1 (ENSOPRG00000004193) #22
Rodentia	ANCESTRAL SPECIES	19	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Rodentia_B	ANCESTRAL SPECIES	17	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Kangaroo rat	MODERN SPECIES	336	Trp53inp1 (ENSDORG00000023784)	Ccne2 (ENSDORG00000014957)	Ints8 (ENSDORG00000014954) #7	Dpy19l4 (ENSDORG00000004016) #8	Esrp1 (ENSDORG00000011987) #9	ENSDORG00000024142	Virma (ENSDORG00000002324) #10	Rad54b (ENSDORG00000002492) #11	Fsbp (ENSDORG00000024906)	Gem (ENSDORG00000003903) #12	Pdp1 (ENSDORG00000015533) #15	Tmem67 (ENSDORG00000004149) #16	ENSDORG00000024034 #17	Cibar1 (ENSDORG00000028815) #19	Triqk (ENSDORG00000028174) #21	Runx1t1 (ENSDORG00000013545) #22	ENSDORG00000024490	Slc26a7 (ENSDORG00000014243) #23	Otud6b (ENSDORG00000005619) #25	Pip4p2 (ENSDORG00000025689) #26	Gm11837 (ENSDORG00000027568) #27	Necab1 (ENSDORG00000006622) #28	Tmem64 (ENSDORG00000029629) #29	Calb1 (ENSDORG00000013359) #30	Decr1 (ENSDORG00000013357) #31	Osgin2 (ENSDORG00000025748) #33	Ripk2 (ENSDORG00000002598) #34	Mmp16 (ENSDORG00000000461) #36	Cngb3 (ENSDORG00000008524)	ENSDORG00000028023	Cpne3 (ENSDORG00000000949)
Myomorpha	ANCESTRAL SPECIES	18	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Muroidea	ANCESTRAL SPECIES	14	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Cricetidae_B	ANCESTRAL SPECIES	50	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Northern American deer mouse	DUPLICATION
Northern American deer mouse	MODERN SPECIES	11	Dpy19l4 (ENSPEMG00000002369) #8	Esrp1 (ENSPEMG00000020410) #9	Virma (ENSPEMG00000002167) #10	Rad54b (ENSPEMG00000012133) #11	Gem (ENSPEMG00000012652) #12	ENSPEMG00000013625	Cdh17 (ENSPEMG00000018197) #13	Pdp1 (ENSPEMG00000028541) #15	Tmem67 (ENSPEMG00000017838) #16	ENSPEMG00000008279 #17	Cibar1 (ENSPEMG00000010608) #19	ENSPEMG00000030089	ENSPEMG00000028954	ENSPEMG00000028937	Triqk (ENSPEMG00000025632) #21	ENSPEMG00000017685 #22	ENSPEMG00000000556	Slc26a7 (ENSPEMG00000011690) #23	ENSPEMG00000011651	Otud6b (ENSPEMG00000004107) #25	ENSPEMG00000027425	Pip4p2 (ENSPEMG00000029418) #26	Gm11837 (ENSPEMG00000015295) #27	Necab1 (ENSPEMG00000014048) #28	Tmem64 (ENSPEMG00000006681) #29	ENSPEMG00000007388	Calb1 (ENSPEMG00000015493) #30	Decr1 (ENSPEMG00000002922) #31	Nbn (ENSPEMG00000001045) #32	Osgin2 (ENSPEMG00000009452) #33	Ripk2 (ENSPEMG00000018444) #34
Northern American deer mouse	MODERN SPECIES	14	Crb3 (ENSPEMG00000021919)	Dennd1c (ENSPEMG00000023860)	Tubb4a (ENSPEMG00000028633)	Tnfsf9 (ENSPEMG00000020989)	Cd70 (ENSPEMG00000015587)	ENSPEMG00000011159	ENSPEMG00000015087	Tnfsf14 (ENSPEMG00000000292)	ENSPEMG00000001526	Gpr108 (ENSPEMG00000030315)	Trip10 (ENSPEMG00000017394)	ENSPEMG00000031058	Vav1 (ENSPEMG00000015943)	Adgre1 (ENSPEMG00000013357)	ENSPEMG00000008525	ENSPEMG00000028855 #22	ENSPEMG00000030002	2610008E11Rik (ENSPEMG00000029764)	ENSPEMG00000008518	ENSPEMG00000008828	Or7a36 (ENSPEMG00000011041)	ENSPEMG00000009495	ENSPEMG00000015450	Ccdc105 (ENSPEMG00000008931)	Casp14 (ENSPEMG00000003806)	Or1i2 (ENSPEMG00000002732)	Syde1 (ENSPEMG00000017967)	Ilvbl (ENSPEMG00000016636)	Or10b1 (ENSPEMG00000031391)	Notch3 (ENSPEMG00000003368)	ENSPEMG00000026978
Prairie vole	MODERN SPECIES	355	Trp53inp1 (ENSMOCG00000021132)	Ccne2 (ENSMOCG00000001638)	Ints8 (ENSMOCG00000017112) #7	Dpy19l4 (ENSMOCG00000007197) #8	Esrp1 (ENSMOCG00000013567) #9	Virma (ENSMOCG00000015388) #10	Rad54b (ENSMOCG00000020035) #11	Fsbp (ENSMOCG00000008704)	Gem (ENSMOCG00000006722) #12	Cdh17 (ENSMOCG00000010844) #13	Pdp1 (ENSMOCG00000014340) #15	Tmem67 (ENSMOCG00000011860) #16	ENSMOCG00000005603 #17	Cibar1 (ENSMOCG00000011538) #19	Triqk (ENSMOCG00000007927) #21	Runx1t1 (ENSMOCG00000017694) #22	Slc26a7 (ENSMOCG00000009692) #23	Lrrc69 (ENSMOCG00000015447) #24	Otud6b (ENSMOCG00000003127) #25	Pip4p2 (ENSMOCG00000010645) #26	Gm11837 (ENSMOCG00000020310) #27	Necab1 (ENSMOCG00000016012) #28	Tmem64 (ENSMOCG00000013491) #29	Calb1 (ENSMOCG00000019024) #30	ENSMOCG00000020786	Decr1 (ENSMOCG00000015275) #31	Nbn (ENSMOCG00000006817) #32	Osgin2 (ENSMOCG00000006201) #33	Ripk2 (ENSMOCG00000008336) #34	ENSMOCG00000009257	Mmp16 (ENSMOCG00000021490) #36
Cricetinae	ANCESTRAL SPECIES	31	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a	ENSGT00940000154968
Golden Hamster	MODERN SPECIES	625																Runx1t1 (ENSMAUG00000018463) #22	Slc26a7 (ENSMAUG00000012657) #23	ENSMAUG00000010763	Otud6b (ENSMAUG00000007981) #25	Pip4p2 (ENSMAUG00000014691) #26	Gm11837 (ENSMAUG00000004822) #27	Necab1 (ENSMAUG00000019959) #28	Tmem64 (ENSMAUG00000021648) #29	Calb1 (ENSMAUG00000009816) #30	Decr1 (ENSMAUG00000018588) #31	Nbn (ENSMAUG00000021633) #32	Osgin2 (ENSMAUG00000009459) #33	Ripk2 (ENSMAUG00000008933) #34	ENSMAUG00000010464	Mmp16 (ENSMAUG00000004025) #36	Cngb3 (ENSMAUG00000019078)
Chinese hamster chok1gshd	MODERN SPECIES	136								Cdh17 (ENSCGRG00001021364) #13	ENSCGRG00001020641	Pdp1 (ENSCGRG00001020479) #15	Tmem67 (ENSCGRG00001010331) #16	ENSCGRG00001008710 #17	Cibar1 (ENSCGRG00001002559) #19	ENSCGRG00001000658	Triqk (ENSCGRG00001022816) #21	Runx1t1 (ENSCGRG00001019631) #22	Slc26a7 (ENSCGRG00001019804) #23	Lrrc69 (ENSCGRG00001016012) #24	Otud6b (ENSCGRG00001014146) #25	Pip4p2 (ENSCGRG00001012389) #26	Gm11837 (ENSCGRG00001011629) #27	Necab1 (ENSCGRG00001003663) #28	Tmem64 (ENSCGRG00001000505) #29	Calb1 (ENSCGRG00001019841) #30	Decr1 (ENSCGRG00001018780) #31	Nbn (ENSCGRG00001017878) #32	Osgin2 (ENSCGRG00001014984) #33	Ripk2 (ENSCGRG00001013537) #34	ENSCGRG00001016008	Mmp16 (ENSCGRG00001011918) #36	Cngb3 (ENSCGRG00001001056)
Murinae	ANCESTRAL SPECIES	2	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Mus	ANCESTRAL SPECIES	3	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Mus_A	ANCESTRAL SPECIES	3	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Mus_B	ANCESTRAL SPECIES	22	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322.d #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Mouse	MODERN SPECIES	13	Ccne2 (ENSMUSG00000028212)	Ints8 (ENSMUSG00000040738) #7	Dpy19l4 (ENSMUSG00000045205) #8	Esrp1 (ENSMUSG00000040728) #9	Virma (ENSMUSG00000040720) #10	Rad54b (ENSMUSG00000078773) #11	Fsbp (ENSMUSG00000094595)	Gem (ENSMUSG00000028214) #12	Cdh17 (ENSMUSG00000028217) #13	Pdp1 (ENSMUSG00000049225) #15	Tmem67 (ENSMUSG00000049488) #16	Rbm12b2 (ENSMUSG00000052137) #17	Rbm12b1 (ENSMUSG00000046667) #17	Cibar1 (ENSMUSG00000028218) #19	Triqk (ENSMUSG00000055963) #21	Runx1t1 (ENSMUSG00000006586) #22	Slc26a7 (ENSMUSG00000040569) #23	Lrrc69 (ENSMUSG00000023151) #24	Otud6b (ENSMUSG00000040550) #25	Pip4p2 (ENSMUSG00000028221) #26	Gm11837 (ENSMUSG00000086587) #27	Necab1 (ENSMUSG00000040536) #28	Tmem64 (ENSMUSG00000043252) #29	Calb1 (ENSMUSG00000028222) #30	Decr1 (ENSMUSG00000028223) #31	Nbn (ENSMUSG00000028224) #32	Osgin2 (ENSMUSG00000041153) #33	Ripk2 (ENSMUSG00000041135) #34	Mmp16 (ENSMUSG00000028226) #36	Cnbd1 (ENSMUSG00000073991)	Cngb3 (ENSMUSG00000056494)
Mus_C	ANCESTRAL SPECIES	2	ENSGT00510000048688	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322.d #17	ENSGT00390000010285.c #19	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
spretus	MODERN SPECIES	13	Ccne2 (MGP_SPRETEiJ_G0026753)	Ints8 (MGP_SPRETEiJ_G0026754) #7	Dpy19l4 (MGP_SPRETEiJ_G0026755) #8	Esrp1 (MGP_SPRETEiJ_G0026756) #9	Virma (MGP_SPRETEiJ_G0026757) #10	Rad54b (MGP_SPRETEiJ_G0026758) #11	Fsbp (MGP_SPRETEiJ_G0026759)	Gem (MGP_SPRETEiJ_G0026760) #12	Cdh17 (MGP_SPRETEiJ_G0026761) #13	Pdp1 (MGP_SPRETEiJ_G0026762) #15	MGP_SPRETEiJ_G0026763	Tmem67 (MGP_SPRETEiJ_G0026764) #16	MGP_SPRETEiJ_G0026765 #17	MGP_SPRETEiJ_G0026766 #17	Cibar1 (MGP_SPRETEiJ_G0026767) #19	Runx1t1 (MGP_SPRETEiJ_G0026768) #22	Slc26a7 (MGP_SPRETEiJ_G0026769) #23	Lrrc69 (MGP_SPRETEiJ_G0026770) #24	MGP_SPRETEiJ_G0026771 #25	Pip4p2 (MGP_SPRETEiJ_G0026772) #26	Necab1 (MGP_SPRETEiJ_G0026773) #28	Tmem64 (MGP_SPRETEiJ_G0026774) #29	Calb1 (MGP_SPRETEiJ_G0026775) #30	Decr1 (MGP_SPRETEiJ_G0026776) #31	Nbn (MGP_SPRETEiJ_G0026777) #32	Osgin2 (MGP_SPRETEiJ_G0026778) #33	Ripk2 (MGP_SPRETEiJ_G0026779) #34	Mmp16 (MGP_SPRETEiJ_G0026780) #36	MGP_SPRETEiJ_G0026781	Cngb3 (MGP_SPRETEiJ_G0026782)	Cpne3 (MGP_SPRETEiJ_G0026783)
Steppe mouse	MODERN SPECIES	2894																Runx1t1 (ENSMSIG00000000727) #22	Slc26a7 (ENSMSIG00000000568) #23	ENSMSIG00000000556	ENSMSIG00000000540	Lrrc69 (ENSMSIG00000000468) #24	ENSMSIG00000000407 #25	Pip4p2 (ENSMSIG00000000344) #26	Gm11837 (ENSMSIG00000000315) #27	Necab1 (ENSMSIG00000000161) #28
Ryukyu mouse	MODERN SPECIES	13	Ndufaf6 (MGP_CAROLIEiJ_G0025803)	Trp53inp1 (MGP_CAROLIEiJ_G0025804)	Ccne2 (MGP_CAROLIEiJ_G0025805)	Ints8 (MGP_CAROLIEiJ_G0025806) #7	Dpy19l4 (MGP_CAROLIEiJ_G0025807) #8	Esrp1 (MGP_CAROLIEiJ_G0025808) #9	Virma (MGP_CAROLIEiJ_G0025809) #10	Rad54b (MGP_CAROLIEiJ_G0025810) #11	Fsbp (MGP_CAROLIEiJ_G0025811)	Gem (MGP_CAROLIEiJ_G0025812) #12	Cdh17 (MGP_CAROLIEiJ_G0025813) #13	Pdp1 (MGP_CAROLIEiJ_G0025814) #15	Tmem67 (MGP_CAROLIEiJ_G0025815) #16	Cibar1 (MGP_CAROLIEiJ_G0025816) #19	Triqk (MGP_CAROLIEiJ_G0025818) #21	Runx1t1 (MGP_CAROLIEiJ_G0025819) #22	Slc26a7 (MGP_CAROLIEiJ_G0025820) #23	Lrrc69 (MGP_CAROLIEiJ_G0025821) #24	Otud6b (MGP_CAROLIEiJ_G0025822) #25	Pip4p2 (MGP_CAROLIEiJ_G0025823) #26	Necab1 (MGP_CAROLIEiJ_G0025824) #28	Tmem64 (MGP_CAROLIEiJ_G0025825) #29	Calb1 (MGP_CAROLIEiJ_G0025826) #30	Decr1 (MGP_CAROLIEiJ_G0025827) #31	Nbn (MGP_CAROLIEiJ_G0025828) #32	Osgin2 (MGP_CAROLIEiJ_G0025829) #33	Ripk2 (MGP_CAROLIEiJ_G0025830) #34	Mmp16 (MGP_CAROLIEiJ_G0025831) #36	MGP_CAROLIEiJ_G0025832	Cngb3 (MGP_CAROLIEiJ_G0025833)	Cpne3 (MGP_CAROLIEiJ_G0025834)
Shrew mouse	MODERN SPECIES	14	Trp53inp1 (MGP_PahariEiJ_G0023927)	Ccne2 (MGP_PahariEiJ_G0023928)	Ints8 (MGP_PahariEiJ_G0023929) #7	Dpy19l4 (MGP_PahariEiJ_G0023930) #8	Esrp1 (MGP_PahariEiJ_G0023931) #9	Virma (MGP_PahariEiJ_G0023932) #10	Rad54b (MGP_PahariEiJ_G0023933) #11	Fsbp (MGP_PahariEiJ_G0023934)	Gem (MGP_PahariEiJ_G0023935) #12	Cdh17 (MGP_PahariEiJ_G0023936) #13	Pdp1 (MGP_PahariEiJ_G0023937) #15	MGP_PahariEiJ_G0023938	Tmem67 (MGP_PahariEiJ_G0023939) #16	Cibar1 (MGP_PahariEiJ_G0023940) #19	Triqk (MGP_PahariEiJ_G0023941) #21	Runx1t1 (MGP_PahariEiJ_G0023942) #22	Slc26a7 (MGP_PahariEiJ_G0023943) #23	Lrrc69 (MGP_PahariEiJ_G0023944) #24	Otud6b (MGP_PahariEiJ_G0023945) #25	Pip4p2 (MGP_PahariEiJ_G0023946) #26	Necab1 (MGP_PahariEiJ_G0023947) #28	Tmem64 (MGP_PahariEiJ_G0023948) #29	Calb1 (MGP_PahariEiJ_G0023949) #30	Decr1 (MGP_PahariEiJ_G0023950) #31	Nbn (MGP_PahariEiJ_G0023951) #32	Osgin2 (MGP_PahariEiJ_G0023952) #33	Ripk2 (MGP_PahariEiJ_G0023953) #34	Mmp16 (MGP_PahariEiJ_G0023954) #36	MGP_PahariEiJ_G0023955	Cngb3 (MGP_PahariEiJ_G0023956)	Cpne3 (MGP_PahariEiJ_G0023957)
Rat	MODERN SPECIES	15	LOC103692302 (ENSRNOG00000063229)	RGD1559441 (ENSRNOG00000067162)	LOC103692301 (ENSRNOG00000070765)	ENSRNOG00000070727	ENSRNOG00000062635	Virma (ENSRNOG00000014664) #10	Fsbp (ENSRNOG00000039949) #11	Gem (ENSRNOG00000015160) #12	Cdh17 (ENSRNOG00000015562) #13	Pdp1 (ENSRNOG00000016180) #15	Tmem67 (ENSRNOG00000016187) #16	LOC120102832 (ENSRNOG00000055292) #17	Rbm12b (ENSRNOG00000016330) #17	Cibar1 (ENSRNOG00000016338) #19	Triqk (ENSRNOG00000039924) #21	Runx1t1 (ENSRNOG00000005673) #22	Slc26a7 (ENSRNOG00000006096) #23	Lrrc69 (ENSRNOG00000006498) #24	Otud6b (ENSRNOG00000006636) #25	Pip4p2 (ENSRNOG00000006697) #26	Necab1 (ENSRNOG00000007256) #27	Necab1 (ENSRNOG00000066027) #28	Tmem64 (ENSRNOG00000007426) #29	Calb1 (ENSRNOG00000007456) #30	Decr1 (ENSRNOG00000008236) #31	Nbn (ENSRNOG00000008580) #32	Osgin2 (ENSRNOG00000009358) #33	ENSRNOG00000067103	Ripk2 (ENSRNOG00000009389) #34	Mmp16 (ENSRNOG00000005708) #36	Cnbd1 (ENSRNOG00000056330)
Upper Galilee mountains blind mole rat	MODERN SPECIES	567															ENSNGAG00000023508	Runx1t1 (ENSNGAG00000014162) #22	Slc26a7 (ENSNGAG00000017774) #23	Lrrc69 (ENSNGAG00000012020) #24	Otud6b (ENSNGAG00000024270) #25	Pip4p2 (ENSNGAG00000019046) #26	Gm11837 (ENSNGAG00000017252) #27	Necab1 (ENSNGAG00000014410) #28	Tmem64 (ENSNGAG00000022488) #29	Calb1 (ENSNGAG00000021601) #30	Decr1 (ENSNGAG00000001065) #31	Nbn (ENSNGAG00000020778) #32	Osgin2 (ENSNGAG00000023887) #33	Ripk2 (ENSNGAG00000023516) #34
Rodentia_A	ANCESTRAL SPECIES	18	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Hystricomorpha	ANCESTRAL SPECIES	12	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521.i #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Hystricomorpha_a	ANCESTRAL SPECIES	9	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521.i #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a	ENSGT00940000154968
Guinea pig	MODERN SPECIES		NDUFAF6 (ENSCPOG00000010701)	TP53INP1 (ENSCPOG00000037283)	ENSCPOG00000013401	INTS8 (ENSCPOG00000013395) #7	DPY19L4 (ENSCPOG00000013388) #8	ESRP1 (ENSCPOG00000012197) #9	VIRMA (ENSCPOG00000009333) #10	RAD54B (ENSCPOG00000011643) #11	FSBP (ENSCPOG00000009332)	GEM (ENSCPOG00000009714) #12	CDH17 (ENSCPOG00000006582) #13	TMEM67 (ENSCPOG00000007816) #16	RBM12B (ENSCPOG00000007815) #17	CIBAR1 (ENSCPOG00000007802) #19	TRIQK (ENSCPOG00000031688) #21	RUNX1T1 (ENSCPOG00000026546) #22	SLC26A7 (ENSCPOG00000002686) #23	LRRC69 (ENSCPOG00000021324) #24	OTUD6B (ENSCPOG00000013595) #25	PIP4P2 (ENSCPOG00000034702) #26	NECAB1 (ENSCPOG00000000501) #28	TMEM64 (ENSCPOG00000034769) #29	CALB1 (ENSCPOG00000000619) #30	DECR1 (ENSCPOG00000036075) #31	NBN (ENSCPOG00000013698) #32	OSGIN2 (ENSCPOG00000013694) #33	RIPK2 (ENSCPOG00000006415) #34	MMP16 (ENSCPOG00000002700) #36	CNGB3 (ENSCPOG00000012943)	CPNE3 (ENSCPOG00000014415)	ENSCPOG00000014411
Hystricomorpha_b	ANCESTRAL SPECIES	25	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521.i #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a	ENSGT00940000154968
Degu	MODERN SPECIES	175	ESRP1 (ENSODEG00000002165) #9	ENSODEG00000002361	VIRMA (ENSODEG00000002449) #10	ENSODEG00000018816	ENSODEG00000002650 #11	ENSODEG00000018878	ENSODEG00000018916	GEM (ENSODEG00000004933) #12	ENSODEG00000004970	CDH17 (ENSODEG00000004993) #13	PDP1 (ENSODEG00000005061) #15	TMEM67 (ENSODEG00000005116) #16	RBM12B (ENSODEG00000019204) #17	CIBAR1 (ENSODEG00000005214) #19	TRIQK (ENSODEG00000005257) #21	RUNX1T1 (ENSODEG00000005303) #22	SLC26A7 (ENSODEG00000005374) #23	LRRC69 (ENSODEG00000005436) #24	ENSODEG00000005466 #25	PIP4P2 (ENSODEG00000005487) #26	NECAB1 (ENSODEG00000005532) #28	TMEM64 (ENSODEG00000005595) #29	ENSODEG00000005609
Long-tailed chinchilla	MODERN SPECIES	124	CCNE2 (ENSCLAG00000006670)	INTS8 (ENSCLAG00000006242) #7	DPY19L4 (ENSCLAG00000008110) #8	ENSCLAG00000007117	ESRP1 (ENSCLAG00000015531) #9	VIRMA (ENSCLAG00000013204) #10	FSBP (ENSCLAG00000013136)	RAD54B (ENSCLAG00000010476) #11	GEM (ENSCLAG00000010140) #12	CDH17 (ENSCLAG00000014507) #13	PDP1 (ENSCLAG00000013964) #15	TMEM67 (ENSCLAG00000006451) #16	RBM12B (ENSCLAG00000017617) #17	CIBAR1 (ENSCLAG00000005013) #19	TRIQK (ENSCLAG00000004830) #21	RUNX1T1 (ENSCLAG00000006551) #22	SLC26A7 (ENSCLAG00000004673) #23	ENSCLAG00000004203	OTUD6B (ENSCLAG00000010851) #25	PIP4P2 (ENSCLAG00000010164) #26	NECAB1 (ENSCLAG00000010008) #28	ENSCLAG00000011366 #29	CALB1 (ENSCLAG00000009767) #30	DECR1 (ENSCLAG00000009666) #31	NBN (ENSCLAG00000008958) #32	OSGIN2 (ENSCLAG00000007112) #33	RIPK2 (ENSCLAG00000006724) #34	MMP16 (ENSCLAG00000006099) #36	CNBD1 (ENSCLAG00000007926)	CNGB3 (ENSCLAG00000007201)	CPNE3 (ENSCLAG00000006089)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	13	ENSHGLG00000042399	ENSHGLG00000035172	VIRMA (ENSHGLG00000006573) #10	ENSHGLG00000032542	ENSHGLG00000039726	FSBP (ENSHGLG00000044850)	GEM (ENSHGLG00000006576) #12	CDH17 (ENSHGLG00000005544) #13	ENSHGLG00000033913	PDP1 (ENSHGLG00000012388) #15	TMEM67 (ENSHGLG00000010068) #16	ENSHGLG00000008567 #19	RBM12B (ENSHGLG00000035676) #17	ENSHGLG00000034602	ENSHGLG00000009480 #21	ENSHGLG00000039549 #22	ENSHGLG00000009308	ENSHGLG00000048605	SLC26A7 (ENSHGLG00000011325) #23	ENSHGLG00000013435	OTUD6B (ENSHGLG00000017604) #25	TMEM55A (ENSHGLG00000015708) #26	C8orf88 (ENSHGLG00000013974) #27	NECAB1 (ENSHGLG00000043170) #28	TMEM64 (ENSHGLG00000013338) #29	ENSHGLG00000038159	ENSHGLG00000050098	CALB1 (ENSHGLG00000046879) #30	ENSHGLG00000007466 #31	NBN (ENSHGLG00000009487) #32	OSGIN2 (ENSHGLG00000039904) #33
Naked mole-rat female	MODERN SPECIES	30	ENSHGLG00000049973	ENSHGLG00000019493	ENSHGLG00000047695	ENSHGLG00000039573	ENSHGLG00000011573	ENSHGLG00000012521	ENSHGLG00000046512	ADNP2 (ENSHGLG00000033188)	ENSHGLG00000042552	ENSHGLG00000032332	ENSHGLG00000038675	ENSHGLG00000037787	ENSHGLG00000034431	ENSHGLG00000035275	ENSHGLG00000038818	ENSHGLG00000036820 #22	ENSHGLG00000003620	ENSHGLG00000038559	ENSHGLG00000050969	ENSHGLG00000013763	S100A4 (ENSHGLG00000016459)	S100A3 (ENSHGLG00000033057)	ENSHGLG00000009571	S100A14 (ENSHGLG00000008860)	S100A1 (ENSHGLG00000044434)	CHTOP (ENSHGLG00000010389)	ENSHGLG00000042410	SNAPIN (ENSHGLG00000043471)	ILF2 (ENSHGLG00000004134)	NPR1 (ENSHGLG00000009046)	ENSHGLG00000041750
Sciuridae	ANCESTRAL SPECIES	17	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT01030000234950	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Marmotini	ANCESTRAL SPECIES	10	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Alpin marmot	MODERN SPECIES	16	CCNE2 (ENSMMMG00000008373)	INTS8 (ENSMMMG00000007978) #7	DPY19L4 (ENSMMMG00000007948) #8	ESRP1 (ENSMMMG00000007808) #9	ENSMMMG00000007791	VIRMA (ENSMMMG00000007702) #10	FSBP (ENSMMMG00000007694)	RAD54B (ENSMMMG00000007647) #11	GEM (ENSMMMG00000007618) #12	CDH17 (ENSMMMG00000007567) #13	PDP1 (ENSMMMG00000007532) #15	TMEM67 (ENSMMMG00000007499) #16	RBM12B (ENSMMMG00000007433) #17	CIBAR1 (ENSMMMG00000007347) #19	TRIQK (ENSMMMG00000007334) #21	RUNX1T1 (ENSMMMG00000007235) #22	SLC26A7 (ENSMMMG00000007202) #23	ENSMMMG00000007149	OTUD6B (ENSMMMG00000007134) #25	PIP4P2 (ENSMMMG00000007117) #26	C8orf88 (ENSMMMG00000007107) #27	NECAB1 (ENSMMMG00000007063) #28	ENSMMMG00000007060 #29	CALB1 (ENSMMMG00000007040) #30	DECR1 (ENSMMMG00000007028) #31	NBN (ENSMMMG00000006973) #32	OSGIN2 (ENSMMMG00000006943) #33	RIPK2 (ENSMMMG00000006737) #34	MMP16 (ENSMMMG00000006720) #36	ENSMMMG00000006702	CNBD1 (ENSMMMG00000006674)
Marmotini_b	ANCESTRAL SPECIES	6	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Squirrel	MODERN SPECIES	144	TP53INP1 (ENSSTOG00000004462)	CCNE2 (ENSSTOG00000004435)	INTS8 (ENSSTOG00000004379) #7	DPY19L4 (ENSSTOG00000014342) #8	ESRP1 (ENSSTOG00000014330) #9	VIRMA (ENSSTOG00000010804) #10	FSBP (ENSSTOG00000010801)	RAD54B (ENSSTOG00000010791) #11	GEM (ENSSTOG00000010786) #12	CDH17 (ENSSTOG00000002021) #13	PDP1 (ENSSTOG00000028703) #15	TMEM67 (ENSSTOG00000010296) #16	RBM12B (ENSSTOG00000027445) #17	CIBAR1 (ENSSTOG00000010284) #19	TRIQK (ENSSTOG00000002731) #21	RUNX1T1 (ENSSTOG00000002287) #22	SLC26A7 (ENSSTOG00000000314) #23	ENSSTOG00000024759	OTUD6B (ENSSTOG00000002954) #25	PIP4P2 (ENSSTOG00000034343) #26	C8orf88 (ENSSTOG00000023014) #27	NECAB1 (ENSSTOG00000001216) #28	TMEM64 (ENSSTOG00000001213) #29	CALB1 (ENSSTOG00000009162) #30	DECR1 (ENSSTOG00000009147) #31	ENSSTOG00000024562	NBN (ENSSTOG00000015180) #32	OSGIN2 (ENSSTOG00000015176) #33	RIPK2 (ENSSTOG00000015168) #34	MMP16 (ENSSTOG00000002129) #36	CNGB3 (ENSSTOG00000004002)
Arctic ground squirrel	MODERN SPECIES	1	TP53INP1 (ENSUPAG00010013560)	CCNE2 (ENSUPAG00010013567)	INTS8 (ENSUPAG00010013609) #7	DPY19L4 (ENSUPAG00010013851) #8	ESRP1 (ENSUPAG00010013887) #9	VIRMA (ENSUPAG00010013956) #10	RAD54B (ENSUPAG00010013994) #11	FSBP (ENSUPAG00010014019)	GEM (ENSUPAG00010014039) #12	CDH17 (ENSUPAG00010014050) #13	PDP1 (ENSUPAG00010014089) #15	TMEM67 (ENSUPAG00010014102) #16	RBM12B (ENSUPAG00010014125) #17	CIBAR1 (ENSUPAG00010014134) #19	ENSUPAG00010014163 #21	RUNX1T1 (ENSUPAG00010014181) #22	SLC26A7 (ENSUPAG00010015342) #23	LRRC69 (ENSUPAG00010015366) #24	OTUD6B (ENSUPAG00010015394) #25	PIP4P2 (ENSUPAG00010015417) #26	C8orf88 (ENSUPAG00010015437) #27	NECAB1 (ENSUPAG00010015448) #28	TMEM64 (ENSUPAG00010015486) #29	CALB1 (ENSUPAG00010015495) #30	DECR1 (ENSUPAG00010015525) #31	NBN (ENSUPAG00010015538) #32	OSGIN2 (ENSUPAG00010015561) #33	RIPK2 (ENSUPAG00010015578) #34	MMP16 (ENSUPAG00010015590) #36	CNBD1 (ENSUPAG00010015603)	CNGB3 (ENSUPAG00010015625)
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES		TP53INP1 (ENSSVLG00005001805)	ENSSVLG00005001753	INTS8 (ENSSVLG00005001719) #7	DPY19L4 (ENSSVLG00005001687) #8	ESRP1 (ENSSVLG00005001584) #9	VIRMA (ENSSVLG00005001519) #10	RAD54B (ENSSVLG00005001462) #11	GEM (ENSSVLG00005001435) #12	CDH17 (ENSSVLG00005001288) #13	PDP1 (ENSSVLG00005001123) #15	TMEM67 (ENSSVLG00005001049) #16	RBM12B (ENSSVLG00005001004) #17	CIBAR1 (ENSSVLG00005000981) #19	ENSSVLG00005000951	ENSSVLG00005000943	ENSSVLG00005000855 #22	SLC26A7 (ENSSVLG00005000726) #23	LRRC69 (ENSSVLG00005000650) #24	ENSSVLG00005000592 #25	PIP4P2 (ENSSVLG00005000545) #26	C8orf88 (ENSSVLG00005000519) #27	NECAB1 (ENSSVLG00005000494) #28	TMEM64 (ENSSVLG00005000474) #29	CALB1 (ENSSVLG00005000460) #30	DECR1 (ENSSVLG00005000424) #31	ENSSVLG00005000384 #32	OSGIN2 (ENSSVLG00005000353) #33	RIPK2 (ENSSVLG00005000327) #34	MMP16 (ENSSVLG00005000299) #36	CNBD1 (ENSSVLG00005000279)	CNGB3 (ENSSVLG00005000250)
Eurasian red squirrel	MODERN SPECIES	3	TP53BP2 (ENSSVLG00005015950)	FBXO28 (ENSSVLG00005015889)	ENSSVLG00005015831	ENSSVLG00005015789	DEGS1 (ENSSVLG00005015737)	NVL (ENSSVLG00005014283)	CNIH4 (ENSSVLG00005013000)	WDR26 (ENSSVLG00005012677)	CNIH3 (ENSSVLG00005012576)	ENSSVLG00005012453	ENSSVLG00005012320	ENSSVLG00005012197	LBR (ENSSVLG00005012135)	ENSSVLG00005011796	ENSSVLG00005011720	ENSSVLG00005011663 #22	ENSSVLG00005011588	BOP1 (ENSSVLG00005011521)	ENAH (ENSSVLG00005011282)	SRP9 (ENSSVLG00005011178)	EPHX1 (ENSSVLG00005011131)	TMEM63A (ENSSVLG00005011067)	ENSSVLG00005010994	PYCR2 (ENSSVLG00005010901)	ENSSVLG00005010786	SDE2 (ENSSVLG00005010717)	ENSSVLG00005010668	ACBD3 (ENSSVLG00005010595)	MIXL1 (ENSSVLG00005010553)	ENSSVLG00005010350	ENSSVLG00005010227
Laurasiatheria	ANCESTRAL SPECIES	18	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00910000147407	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36
Laurasiatheria_a	ANCESTRAL SPECIES	20	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00910000147407	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36
Artiodactyla	ANCESTRAL SPECIES	20	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Suina	ANCESTRAL SPECIES	26	ENSGT00510000048688	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Pig	MODERN SPECIES	12	INTS8 (ENSSSCG00000006096) #7	DPY19L4 (ENSSSCG00000006098) #8	ESRP1 (ENSSSCG00000006099) #9	VIRMA (ENSSSCG00000006100) #10	RAD54B (ENSSSCG00000024290) #11	GEM (ENSSSCG00000006105) #12	CDH17 (ENSSSCG00000006106) #13	PDP1 (ENSSSCG00000006107) #15	TMEM67 (ENSSSCG00000006108) #16	RBM12B (ENSSSCG00000006110) #17	ENSSSCG00000053596 #19	ENSSSCG00000037963 #19	ENSSSCG00000060461	TRIQK (ENSSSCG00000037733) #21	ENSSSCG00000046234	RUNX1T1 (ENSSSCG00000006115) #22	SLC26A7 (ENSSSCG00000006116) #23	LRRC69 (ENSSSCG00000039660) #24	OTUD6B (ENSSSCG00000006120) #25	PIP4P2 (ENSSSCG00000006121) #26	C8orf88 (ENSSSCG00000040562) #27	NECAB1 (ENSSSCG00000031424) #28	TMEM64 (ENSSSCG00000040180) #29	CALB1 (ENSSSCG00000006125) #30	DECR1 (ENSSSCG00000006126) #31	NBN (ENSSSCG00000006127) #32	OSGIN2 (ENSSSCG00000021184) #33	RIPK2 (ENSSSCG00000024096) #34	MMP16 (ENSSSCG00000006132) #36	CNBD1 (ENSSSCG00000036161)	CNGB3 (ENSSSCG00000006134)
Chacoan peccary	MODERN SPECIES	113	NDUFAF6 (ENSCWAG00000012622)	TP53INP1 (ENSCWAG00000012557)	CCNE2 (ENSCWAG00000012395)	INTS8 (ENSCWAG00000012247) #7	DPY19L4 (ENSCWAG00000012168) #8	ESRP1 (ENSCWAG00000010750) #9	VIRMA (ENSCWAG00000010486) #10	RAD54B (ENSCWAG00000010279) #11	GEM (ENSCWAG00000010229) #12	CDH17 (ENSCWAG00000010015) #13	PDP1 (ENSCWAG00000009970) #15	TMEM67 (ENSCWAG00000009909) #16	RBM12B (ENSCWAG00000009880) #17	ENSCWAG00000009745 #19	TRIQK (ENSCWAG00000009683) #21	RUNX1T1 (ENSCWAG00000009249) #22	SLC26A7 (ENSCWAG00000008844) #23	LRRC69 (ENSCWAG00000008730) #24	OTUD6B (ENSCWAG00000008548) #25	PIP4P2 (ENSCWAG00000008508) #26	C8orf88 (ENSCWAG00000008481) #27	NECAB1 (ENSCWAG00000008319) #28	TMEM64 (ENSCWAG00000008227) #29
Artiodactyla_a	ANCESTRAL SPECIES	20	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Artiodactyla_b	ANCESTRAL SPECIES	20	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Cetacea	ANCESTRAL SPECIES	17	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00390000001958.n.b	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT01010000228846	ENSGT00390000007813 #29	ENSGT00940000156511.f	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36
Odontoceti	ANCESTRAL SPECIES	20	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00390000001958.n.b	ENSGT00940000166009	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT01010000228846	ENSGT00390000007813 #29	ENSGT00940000156511.f	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36
Odontoceti_a	ANCESTRAL SPECIES	17	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00390000001958.n.b	ENSGT00940000166009	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT01010000228846	ENSGT00390000007813 #29	ENSGT00940000156511.f	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36
Odontoceti_b	ANCESTRAL SPECIES	19	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00440000033468.c.b.q.a	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00390000001958.n.b	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT01010000228846	ENSGT00390000007813 #29	ENSGT00940000156511.f	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36
Monodontidae	ANCESTRAL SPECIES	20	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00440000033468.c.b.q.a	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00390000001958.n.b	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840.s #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT01010000228846	ENSGT00390000007813 #29	ENSGT00940000156511.f	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36
Narwhal	MODERN SPECIES	300	INTS8 (ENSMMNG00015012933) #7	DPY19L4 (ENSMMNG00015013031) #8	ESRP1 (ENSMMNG00015013094) #9	VIRMA (ENSMMNG00015013145) #10	NACA2 (ENSMMNG00015013186)	RAD54B (ENSMMNG00015013209) #11	GEM (ENSMMNG00015013237) #12	CDH17 (ENSMMNG00015013261) #13	PDP1 (ENSMMNG00015013290) #15	TMEM67 (ENSMMNG00015013303) #16	RBM12B (ENSMMNG00015013330) #17	CIBAR1 (ENSMMNG00015013345) #19	TRIQK (ENSMMNG00015013365) #21	ENSMMNG00015013370	ENSMMNG00015013384	RUNX1T1 (ENSMMNG00015013421) #22	SLC26A7 (ENSMMNG00015013497) #23	ENSMMNG00015013517	LRRC69 (ENSMMNG00015013529) #24	OTUD6B (ENSMMNG00015013553) #25	ENSMMNG00015013569	C8orf88 (ENSMMNG00015013580) #27	NECAB1 (ENSMMNG00015013597) #28	TMEM64 (ENSMMNG00015013621) #29	ENSMMNG00015013641	ENSMMNG00015013668	CALB1 (ENSMMNG00015013708) #30	DECR1 (ENSMMNG00015013788) #31	NBN (ENSMMNG00015013832) #32	OSGIN2 (ENSMMNG00015013859) #33	RIPK2 (ENSMMNG00015013878) #34
Beluga whale	MODERN SPECIES	9	CCNE2 (ENSDLEG00000003335)	DPY19L4 (ENSDLEG00000003350) #8	ESRP1 (ENSDLEG00000003391) #9	VIRMA (ENSDLEG00000003400) #10	ENSDLEG00000003429	RAD54B (ENSDLEG00000003431) #11	FSBP (ENSDLEG00000003437)	GEM (ENSDLEG00000003439) #12	CDH17 (ENSDLEG00000003453) #13	PDP1 (ENSDLEG00000003518) #15	TMEM67 (ENSDLEG00000003533) #16	RBM12B (ENSDLEG00000003583) #17	ENSDLEG00000000093 #19	TRIQK (ENSDLEG00000000114) #21	ENSDLEG00000000125	RUNX1T1 (ENSDLEG00000000164) #22	SLC26A7 (ENSDLEG00000000245) #23	LRRC69 (ENSDLEG00000000353) #24	ENSDLEG00000000412 #25	PIP4P2 (ENSDLEG00000000505) #26	CUNH8orf88 (ENSDLEG00000000528) #27	NECAB1 (ENSDLEG00000000547) #28	ENSDLEG00000000567	TMEM64 (ENSDLEG00000000583) #29	ENSDLEG00000000613	CALB1 (ENSDLEG00000000649) #30	DECR1 (ENSDLEG00000000667) #31	NBN (ENSDLEG00000000693) #32	OSGIN2 (ENSDLEG00000000725) #33	RIPK2 (ENSDLEG00000000748) #34
Vaquita	MODERN SPECIES	8	CCNE2 (ENSPSNG00000013721)	INTS8 (ENSPSNG00000013648) #7	DPY19L4 (ENSPSNG00000013482) #8	ESRP1 (ENSPSNG00000012875) #9	ENSPSNG00000012786	VIRMA (ENSPSNG00000012664) #10	RAD54B (ENSPSNG00000012530) #11	GEM (ENSPSNG00000012467) #12	CDH17 (ENSPSNG00000012164) #13	PDP1 (ENSPSNG00000012063) #15	TMEM67 (ENSPSNG00000011687) #16	RBM12B (ENSPSNG00000011643) #17	CIBAR1 (ENSPSNG00000011581) #19	TRIQK (ENSPSNG00000011518) #21	ENSPSNG00000011476	RUNX1T1 (ENSPSNG00000011288) #22	ENSPSNG00000011240	ENSPSNG00000011196	SLC26A7 (ENSPSNG00000010807) #23	LRRC69 (ENSPSNG00000010633) #24	OTUD6B (ENSPSNG00000010449) #25	PIP4P2 (ENSPSNG00000010354) #26	C8orf88 (ENSPSNG00000010293) #27	NECAB1 (ENSPSNG00000010113) #28	TMEM64 (ENSPSNG00000009977) #29	ENSPSNG00000009853	CALB1 (ENSPSNG00000009682) #30	DECR1 (ENSPSNG00000009552) #31	NBN (ENSPSNG00000009479) #32	OSGIN2 (ENSPSNG00000009424) #33	ENSPSNG00000009394
Dolphin	MODERN SPECIES	2490																RUNX1T1 (ENSTTRG00000017005) #22
Sperm whale	MODERN SPECIES	6	ESRP1 (ENSPCTG00005007404) #9	VIRMA (ENSPCTG00005007475) #10	ENSPCTG00005007598	RAD54B (ENSPCTG00005007630) #11	GEM (ENSPCTG00005007759) #12	CDH17 (ENSPCTG00005007812) #13	ENSPCTG00005007923	PDP1 (ENSPCTG00005007940) #15	TMEM67 (ENSPCTG00005007975) #16	ENSPCTG00005008073	RBM12B (ENSPCTG00005008096) #17	ENSPCTG00005008101 #19	ENSPCTG00005008114 #19	TRIQK (ENSPCTG00005008124) #21	ENSPCTG00005008141	RUNX1T1 (ENSPCTG00005008176) #22	ENSPCTG00005008617	SLC26A7 (ENSPCTG00005008652) #23	ENSPCTG00005008872	LRRC69 (ENSPCTG00005008888) #24	OTUD6B (ENSPCTG00005008998) #25	PIP4P2 (ENSPCTG00005009130) #26	C15H8orf88 (ENSPCTG00005009171) #27	NECAB1 (ENSPCTG00005009251) #28	TMEM64 (ENSPCTG00005009411) #29	ENSPCTG00005009504	ENSPCTG00005009534	CALB1 (ENSPCTG00005009596) #30	DECR1 (ENSPCTG00005009793) #31	NBN (ENSPCTG00005009932) #32	OSGIN2 (ENSPCTG00005010002) #33
Blue whale	MODERN SPECIES	8	TP53INP1 (ENSBMSG00010015369)	CCNE2 (ENSBMSG00010015418)	INTS8 (ENSBMSG00010015475) #7	DPY19L4 (ENSBMSG00010015651) #8	ESRP1 (ENSBMSG00010015708) #9	VIRMA (ENSBMSG00010015867) #10	RAD54B (ENSBMSG00010015975) #11	GEM (ENSBMSG00010016010) #12	CDH17 (ENSBMSG00010016044) #13	PDP1 (ENSBMSG00010016171) #15	TMEM67 (ENSBMSG00010016211) #16	CIBAR1 (ENSBMSG00010016343) #19	TRIQK (ENSBMSG00010016391) #21	ENSBMSG00010016413	ENSBMSG00010016427	RUNX1T1 (ENSBMSG00010016503) #22	SLC26A7 (ENSBMSG00010017258) #23	LRRC69 (ENSBMSG00010017450) #24	ENSBMSG00010017556 #25	PIP4P2 (ENSBMSG00010017672) #26	C8orf88 (ENSBMSG00010017727) #27	NECAB1 (ENSBMSG00010017753) #28	TMEM64 (ENSBMSG00010017824) #29	ENSBMSG00010017869	ENSBMSG00010017894	ENSBMSG00010017923	ENSBMSG00010017951	CALB1 (ENSBMSG00010017974) #30	DECR1 (ENSBMSG00010018054) #31	NBN (ENSBMSG00010018118) #32	OSGIN2 (ENSBMSG00010018162) #33
Pecora	ANCESTRAL SPECIES	20	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Percora_a	ANCESTRAL SPECIES	23	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Bovidae	ANCESTRAL SPECIES	22	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT01090000260003.a.b.b.a.a.b.b.a.h.a.a	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT01000000215502	ENSGT00940000157532 #36	ENSGT00390000001688
Caprinae	ANCESTRAL SPECIES	18	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT01090000260003.a.b.b.a.a.b.b.a.h.a.a	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT01000000215502	ENSGT00940000157532 #36	ENSGT00390000001688
Goat	MODERN SPECIES	5	DPY19L4 (ENSCHIG00000020474) #8	ESRP1 (ENSCHIG00000014128) #9	ENSCHIG00000019947	VIRMA (ENSCHIG00000015977) #10	RAD54B (ENSCHIG00000008230) #11	GEM (ENSCHIG00000008651) #12	CDH17 (ENSCHIG00000012379) #13	ENSCHIG00000001629	PDP1 (ENSCHIG00000021127) #15	ENSCHIG00000011909	TMEM67 (ENSCHIG00000015650) #16	RBM12B (ENSCHIG00000006790) #17	ENSCHIG00000023975 #19	ENSCHIG00000015464	TRIQK (ENSCHIG00000008695) #21	RUNX1T1 (ENSCHIG00000014084) #22	SLC26A7 (ENSCHIG00000016301) #23	LRRC69 (ENSCHIG00000016924) #24	PIP4P2 (ENSCHIG00000015234) #26	C8orf88 (ENSCHIG00000011393) #27	TMEM64 (ENSCHIG00000015622) #29	CALB1 (ENSCHIG00000021026) #30	DECR1 (ENSCHIG00000013816) #31	NBN (ENSCHIG00000011173) #32	OSGIN2 (ENSCHIG00000026429) #33	RIPK2 (ENSCHIG00000018544) #34	ENSCHIG00000006962	ENSCHIG00000019174	MMP16 (ENSCHIG00000013290) #36	CNBD1 (ENSCHIG00000010091)	ENSCHIG00000009883
Rambouillet Sheep	MODERN SPECIES	25	DPY19L4 (ENSOARG00020004191) #8	ESRP1 (ENSOARG00020004286) #9	VIRMA (ENSOARG00020004374) #10	FSBP (ENSOARG00020004524) #11	GEM (ENSOARG00020004634) #12	ENSOARG00020004677 #13	ENSOARG00020004730 #13	ENSOARG00020004788	PDP1 (ENSOARG00020004806) #15	TMEM67 (ENSOARG00020004847) #16	RBM12B (ENSOARG00020005027) #17	ENSOARG00020005054 #19	ENSOARG00020005116	TRIQK (ENSOARG00020005140) #21	ENSOARG00020005179	RUNX1T1 (ENSOARG00020005217) #22	ENSOARG00020005447	ENSOARG00020005508	ENSOARG00020005529	SLC26A7 (ENSOARG00020005566) #23	ENSOARG00020005634	OTUD6B (ENSOARG00020005663) #25	PIP4P2 (ENSOARG00020005753) #26	C8orf88 (ENSOARG00020005781) #27	TMEM64 (ENSOARG00020005807) #29	CALB1 (ENSOARG00020005828) #30	DECR1 (ENSOARG00020005913) #31	ENSOARG00020006089 #33	RIPK2 (ENSOARG00020006138) #34	ENSOARG00020006170	MMP16 (ENSOARG00020006187) #36
Bovinae	ANCESTRAL SPECIES	18	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511.l #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT01090000260003.a.b.b.a.a.b.b.a.h.a.a	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT01000000215502	ENSGT00940000157532 #36	ENSGT00390000001688
Bos	ANCESTRAL SPECIES	21	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511.l #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c.fb.a #19	ENSGT01090000260003.a.b.b.a.a.b.b.a.h.a.a	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000182995.e.a.a.a.fb.b	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT01000000215502	ENSGT00940000157532 #36	ENSGT00390000001688
Bos_b	ANCESTRAL SPECIES	25	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511.l #9	ENSGT00390000002833.c #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c.fb.a #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000182995.e.a.a.a.fb.b	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT01000000215502	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00960000189807
Cow	MODERN SPECIES	5	TP53INP1 (ENSBTAG00000055158)	CCNE2 (ENSBTAG00000004906)	INTS8 (ENSBTAG00000004902) #7	DPY19L4 (ENSBTAG00000013621) #8	ESRP1 (ENSBTAG00000021838) #9	VIRMA (ENSBTAG00000003789) #10	RAD54B (ENSBTAG00000000632) #11	FSBP (ENSBTAG00000024984)	GEM (ENSBTAG00000007596) #12	CDH17 (ENSBTAG00000021964) #13	PDP1 (ENSBTAG00000000199) #15	TMEM67 (ENSBTAG00000044190) #16	RBM12B (ENSBTAG00000013408) #17	CIBAR1 (ENSBTAG00000013405) #19	TRIQK (ENSBTAG00000047532) #21	RUNX1T1 (ENSBTAG00000017339) #22	SLC26A7 (ENSBTAG00000032301) #23	ENSBTAG00000054143	ENSBTAG00000053113	OTUD6B (ENSBTAG00000003481) #25	PIP4P2 (ENSBTAG00000039968) #26	C14H8orf88 (ENSBTAG00000051638) #27	ENSBTAG00000032281	TMEM64 (ENSBTAG00000011268) #29	CALB1 (ENSBTAG00000015924) #30	DECR1 (ENSBTAG00000019663) #31	NBN (ENSBTAG00000013225) #32	OSGIN2 (ENSBTAG00000013678) #33	RIPK2 (ENSBTAG00000015271) #34	ENSBTAG00000048920	MMP16 (ENSBTAG00000006877) #36
Hybrid Bos Indicus	MODERN SPECIES	5	TP53INP1 (ENSBIXG00005010325)	CCNE2 (ENSBIXG00005010292)	INTS8 (ENSBIXG00005000820) #7	ENSBIXG00005010158	DPY19L4 (ENSBIXG00005010150) #8	ENSBIXG00005010129 #9	ENSBIXG00005010040 #10	RAD54B (ENSBIXG00005005949) #11	ENSBIXG00005000675	GEM (ENSBIXG00005009904) #12	CDH17 (ENSBIXG00005000643) #13	PDP1 (ENSBIXG00005009795) #15	TMEM67 (ENSBIXG00005009644) #16	ENSBIXG00005000400 #19	TRIQK (ENSBIXG00005009081) #21	RUNX1T1 (ENSBIXG00005009027) #22	SLC26A7 (ENSBIXG00005008908) #23	ENSBIXG00005008875	LRRC69 (ENSBIXG00005008841) #24	PIP4P2 (ENSBIXG00005008729) #26	TMEM64 (ENSBIXG00005000253) #29	ENSBIXG00005008688	ENSBIXG00005005260	CALB1 (ENSBIXG00005029211) #30	DECR1 (ENSBIXG00005029164) #31	NBN (ENSBIXG00005029137) #32	OSGIN2 (ENSBIXG00005001877) #33	RIPK2 (ENSBIXG00005005157) #34	ENSBIXG00005007609	MMP16 (ENSBIXG00005001955) #36	ENSBIXG00005029065
Bos_a	ANCESTRAL SPECIES	60	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511.l #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c.fb.a #19	ENSGT01090000260003.a.b.b.a.a.b.b.a.h.a.a	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000182995.e.a.a.a.fb.b	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00960000189807
Domestic yak	MODERN SPECIES	9	TP53INP1 (ENSBGRG00000006104)	CCNE2 (ENSBGRG00000006166)	INTS8 (ENSBGRG00000006264) #7	DPY19L4 (ENSBGRG00000006789) #8	ESRP1 (ENSBGRG00000007064) #9	VIRMA (ENSBGRG00000008337) #10	RAD54B (ENSBGRG00000008611) #11	GEM (ENSBGRG00000008787) #12	CDH17 (ENSBGRG00000008888) #13	PDP1 (ENSBGRG00000009030) #15	TMEM67 (ENSBGRG00000009278) #16	RBM12B (ENSBGRG00000010030) #17	ENSBGRG00000010058 #19	ENSBGRG00000010153	TRIQK (ENSBGRG00000010214) #21	RUNX1T1 (ENSBGRG00000010331) #22	SLC26A7 (ENSBGRG00000010530) #23	LRRC69 (ENSBGRG00000010656) #24	ENSBGRG00000010877 #25	PIP4P2 (ENSBGRG00000011183) #26	ENSBGRG00000011282 #27	ENSBGRG00000011393	TMEM64 (ENSBGRG00000011516) #29	CALB1 (ENSBGRG00000011619) #30	DECR1 (ENSBGRG00000011742) #31	NBN (ENSBGRG00000011864) #32	OSGIN2 (ENSBGRG00000012206) #33	RIPK2 (ENSBGRG00000012340) #34	MMP16 (ENSBGRG00000012532) #36	ENSBGRG00000012745	ENSBGRG00000012762
Wild yak	MODERN SPECIES	140														TRIQK (ENSBMUG00000011588) #21	ENSBMUG00000011593	RUNX1T1 (ENSBMUG00000011768) #22	SLC26A7 (ENSBMUG00000011829) #23	LRRC69 (ENSBMUG00000011864) #24	OTUD6B (ENSBMUG00000011901) #25	PIP4P2 (ENSBMUG00000011931) #26	C8orf88 (ENSBMUG00000011943) #27	ENSBMUG00000011969	TMEM64 (ENSBMUG00000012014) #29	CALB1 (ENSBMUG00000012024) #30	DECR1 (ENSBMUG00000012047) #31
American bison	MODERN SPECIES	2430																RUNX1T1 (ENSBBBG00000021232) #22	ENSBBBG00000021010	SLC26A7 (ENSBBBG00000021000) #23	LRRC69 (ENSBBBG00000020938) #24	OTUD6B (ENSBBBG00000020910) #25	PIP4P2 (ENSBBBG00000005616) #26	C8orf88 (ENSBBBG00000020865) #27	ENSBBBG00000020855	CALB1 (ENSBBBG00000020852) #30	DECR1 (ENSBBBG00000005607) #31	ENSBBBG00000020796	NBN (ENSBBBG00000008942) #32	OSGIN2 (ENSBBBG00000005600) #33	RIPK2 (ENSBBBG00000005598) #34	ENSBBBG00000020729	MMP16 (ENSBBBG00000005585) #36
Siberian musk deer	MODERN SPECIES	174	INTS8 (ENSMMSG00000001404) #7	DPY19L4 (ENSMMSG00000001374) #8	ESRP1 (ENSMMSG00000001302) #9	VIRMA (ENSMMSG00000001204) #10	RAD54B (ENSMMSG00000001134) #11	ENSMMSG00000001099	GEM (ENSMMSG00000001083) #12	CDH17 (ENSMMSG00000000983) #13	PDP1 (ENSMMSG00000000948) #15	ENSMMSG00000000936	TMEM67 (ENSMMSG00000000780) #16	RBM12B (ENSMMSG00000000739) #17	ENSMMSG00000000702 #19	ENSMMSG00000000677	TRIQK (ENSMMSG00000000665) #21	RUNX1T1 (ENSMMSG00000000603) #22	SLC26A7 (ENSMMSG00000000548) #23	LRRC69 (ENSMMSG00000000512) #24	OTUD6B (ENSMMSG00000000420) #25	PIP4P2 (ENSMMSG00000000374) #26	C8orf88 (ENSMMSG00000000359) #27	TMEM64 (ENSMMSG00000000349) #29	CALB1 (ENSMMSG00000000306) #30	DECR1 (ENSMMSG00000000266) #31	NBN (ENSMMSG00000000194) #32	OSGIN2 (ENSMMSG00000000138) #33	RIPK2 (ENSMMSG00000000104) #34	ENSMMSG00000000090
Yarkand deer	MODERN SPECIES	13	ESRP1 (ENSCHYG00000007116) #9	VIRMA (ENSCHYG00000007760) #10	RAD54B (ENSCHYG00000008124) #11	GEM (ENSCHYG00000008382) #12	CDH17 (ENSCHYG00000008444) #13	ENSCHYG00000008519	ENSCHYG00000008529	PDP1 (ENSCHYG00000008541) #15	ENSCHYG00000008561	TMEM67 (ENSCHYG00000008621) #16	ENSCHYG00000009165	RBM12B (ENSCHYG00000009201) #17	ENSCHYG00000009303 #19	ENSCHYG00000009356 #19	TRIQK (ENSCHYG00000009400) #21	RUNX1T1 (ENSCHYG00000009466) #22	ENSCHYG00000009900 #23	LRRC69 (ENSCHYG00000009964) #24	ENSCHYG00000010134 #25	PIP4P2 (ENSCHYG00000010301) #26	C8orf88 (ENSCHYG00000010352) #27	ENSCHYG00000010442 #29	CALB1 (ENSCHYG00000010474) #30	DECR1 (ENSCHYG00000010587) #31	NBN (ENSCHYG00000010824) #32	OSGIN2 (ENSCHYG00000010943) #33	RIPK2 (ENSCHYG00000011078) #34	ENSCHYG00000011356	MMP16 (ENSCHYG00000011395) #36	ENSCHYG00000011463	CNBD1 (ENSCHYG00000011498)
Camelidae	ANCESTRAL SPECIES	19	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT01030000234950	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29
Arabian camel	MODERN SPECIES	17	CCNE2 (ENSCDRG00005021183)	INTS8 (ENSCDRG00005021172) #7	DPY19L4 (ENSCDRG00005021160) #8	ENSCDRG00005021153	ESRP1 (ENSCDRG00005021141) #9	VIRMA (ENSCDRG00005021115) #10	RAD54B (ENSCDRG00005021104) #11	GEM (ENSCDRG00005021094) #12	CDH17 (ENSCDRG00005021084) #13	PDP1 (ENSCDRG00005021075) #15	TMEM67 (ENSCDRG00005021066) #16	RBM12B (ENSCDRG00005021057) #17	CIBAR1 (ENSCDRG00005021047) #19	ENSCDRG00005021030	ENSCDRG00005021023	RUNX1T1 (ENSCDRG00005020987) #22	SLC26A7 (ENSCDRG00005020955) #23	LRRC69 (ENSCDRG00005020925) #24	OTUD6B (ENSCDRG00005020904) #25	PIP4P2 (ENSCDRG00005020889) #26	C8orf88 (ENSCDRG00005020886) #27	ENSCDRG00005020885	NECAB1 (ENSCDRG00005020870) #28	ENSCDRG00005020857 #29	ENSCDRG00005020848
Alpaca	MODERN SPECIES	2743																RUNX1T1 (ENSVPAG00000009494) #22
Laurasiatheria_b	ANCESTRAL SPECIES	20	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00910000147407	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36
Laurasiatheria_c	ANCESTRAL SPECIES	19	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00910000147407	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Equus	ANCESTRAL SPECIES	14	ENSGT00510000048688	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00910000147407	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00390000014654	ENSGT00940000163032	ENSGT00940000155633.D
Donkey	MODERN SPECIES	3	MBP (ENSEASG00005002078)	ZNF236 (ENSEASG00005002084)	ZNF516 (ENSEASG00005002101)	TSHZ1 (ENSEASG00005002107)	PTGR3 (ENSEASG00005032876)	ENSEASG00005023898	ENSEASG00005036048	ENSEASG00005016242 #12	CDH17 (ENSEASG00005016247) #13	PDP1 (ENSEASG00005031219) #15	TMEM67 (ENSEASG00005016269) #16	RBM12B (ENSEASG00005016297) #17	ENSEASG00005016300 #19	ENSEASG00005031386 #19	TRIQK (ENSEASG00005025608) #21	RUNX1T1 (ENSEASG00005016311) #22	SLC26A7 (ENSEASG00005014030) #23	OTUD6B (ENSEASG00005014036) #25	PIP4P2 (ENSEASG00005014038) #26	C8orf88 (ENSEASG00005036654) #27	ENSEASG00005026399	NECAB1 (ENSEASG00005014047) #28	TMEM64 (ENSEASG00005014049) #29	CALB1 (ENSEASG00005014050) #30	ENSEASG00005014053 #31	ENSEASG00005014055	NBN (ENSEASG00005014058) #32	OSGIN2 (ENSEASG00005028467) #33	ENSEASG00005014064 #34	ENSEASG00005027435	ENSEASG00005030668
Horse	MODERN SPECIES	30	ENSECAG00000052620	ESRP1 (ENSECAG00000000784) #9	VIRMA (ENSECAG00000012879) #10	ENSECAG00000049378	RAD54B (ENSECAG00000021949) #11	ENSECAG00000004316	ENSECAG00000059478	GEM (ENSECAG00000018531) #12	CDH17 (ENSECAG00000017615) #13	ENSECAG00000045038	PDP1 (ENSECAG00000016359) #15	TMEM67 (ENSECAG00000019054) #16	RBM12B (ENSECAG00000017870) #17	CIBAR1 (ENSECAG00000007382) #19	TRIQK (ENSECAG00000035852) #21	RUNX1T1 (ENSECAG00000000178) #22	SLC26A7 (ENSECAG00000003602) #23	ENSECAG00000059759	OTUD6B (ENSECAG00000018205) #25	PIP4P2 (ENSECAG00000012004) #26	ENSECAG00000029843	C8orf88 (ENSECAG00000050360) #27	NECAB1 (ENSECAG00000009384) #28	TMEM64 (ENSECAG00000008174) #29	CALB1 (ENSECAG00000000058) #30	ENSECAG00000056912	DECR1 (ENSECAG00000022113) #31	ENSECAG00000037667	OSGIN2 (ENSECAG00000013560) #33	NBN (ENSECAG00000013889) #32	RIPK2 (ENSECAG00000023011) #34
Chiroptera	ANCESTRAL SPECIES	27	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25
Megabat	MODERN SPECIES	4978																RUNX1T1 (ENSPVAG00000008458) #22
Microchiroptera	ANCESTRAL SPECIES	27	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25
Greater horseshoe bat	MODERN SPECIES	5	ESRP1 (ENSRFEG00010012180) #9	ENSRFEG00010012079	VIRMA (ENSRFEG00010011950) #10	ENSRFEG00010011909	RAD54B (ENSRFEG00010011469) #11	GEM (ENSRFEG00010011387) #12	CDH17 (ENSRFEG00010011194) #13	PDP1 (ENSRFEG00010010990) #15	ENSRFEG00010010832 #16	ENSRFEG00010010784 #16	RBM12B (ENSRFEG00010010756) #17	ENSRFEG00010010711 #19	ENSRFEG00010010471 #19	TRIQK (ENSRFEG00010010363) #21	ENSRFEG00010010330 #20	RUNX1T1 (ENSRFEG00010014288) #22	SLC26A7 (ENSRFEG00010013718) #23	ENSRFEG00010013686	ENSRFEG00010013608	LRRC69 (ENSRFEG00010013404) #24	ENSRFEG00010013177 #25	ENSRFEG00010013158	SPIDR (ENSRFEG00010013063)	CEBPD (ENSRFEG00010013042)	PRKDC (ENSRFEG00010012932)	MCM4 (ENSRFEG00010012774)	ENSRFEG00010012735	ENSRFEG00010012650	CLXN (ENSRFEG00010012494)	ENSRFEG00010012447	PPDPFL (ENSRFEG00010012401)
Microbat	MODERN SPECIES	1050																RUNX1T1 (ENSMLUG00000004595) #22	SLC26A7 (ENSMLUG00000003742) #23	ENSMLUG00000023522	OTUD6B (ENSMLUG00000016954) #25	SNTG1 (ENSMLUG00000011379)	PCMTD1 (ENSMLUG00000002277)	MYC (ENSMLUG00000026933)	ENSMLUG00000027632	ENSMLUG00000029252	ENSMLUG00000026948	ENSMLUG00000008520	CYRIB (ENSMLUG00000011305)	ASAP1 (ENSMLUG00000009025)	ADCY8 (ENSMLUG00000012194)	ENSMLUG00000022216	ENSMLUG00000015388
Carnivora	ANCESTRAL SPECIES	22	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Felidae	ANCESTRAL SPECIES	22	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00390000000571.b.b	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Panthera	ANCESTRAL SPECIES	16	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00390000000571.b.b	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Tiger	DUPLICATION
Tiger	MODERN SPECIES	175						RAD54B (ENSPTIG00000012670) #11	ENSPTIG00000013371	GEM (ENSPTIG00000016878) #12	CDH17 (ENSPTIG00000017434) #13	PDP1 (ENSPTIG00000018605) #15	TMEM67 (ENSPTIG00000019697) #16	RBM12B (ENSPTIG00000020071) #17	CIBAR1 (ENSPTIG00000021531) #19	TRIQK (ENSPTIG00000009851) #21	ENSPTIG00000007336 #20	ENSPTIG00000013341 #22	ENSPTIG00000014067 #22	ENSPTIG00000014905	CPEB4 (ENSPTIG00000015408)	ENSPTIG00000017876	STC2 (ENSPTIG00000020657)	NKX2-5 (ENSPTIG00000021046)	BNIP1 (ENSPTIG00000021237)	CREBRF (ENSPTIG00000000444)	ATP6V0E1 (ENSPTIG00000005140)	RPL26L1 (ENSPTIG00000007028)	ERGIC1 (ENSPTIG00000008508)
Tiger	MODERN SPECIES	175					RAD54B (ENSPTIG00000012670) #11	ENSPTIG00000013371	GEM (ENSPTIG00000016878) #12	CDH17 (ENSPTIG00000017434) #13	PDP1 (ENSPTIG00000018605) #15	TMEM67 (ENSPTIG00000019697) #16	RBM12B (ENSPTIG00000020071) #17	CIBAR1 (ENSPTIG00000021531) #19	TRIQK (ENSPTIG00000009851) #21	ENSPTIG00000007336 #20	ENSPTIG00000013341 #22	ENSPTIG00000014067 #22	ENSPTIG00000014905	CPEB4 (ENSPTIG00000015408)	ENSPTIG00000017876	STC2 (ENSPTIG00000020657)	NKX2-5 (ENSPTIG00000021046)	BNIP1 (ENSPTIG00000021237)	CREBRF (ENSPTIG00000000444)	ATP6V0E1 (ENSPTIG00000005140)	RPL26L1 (ENSPTIG00000007028)	ERGIC1 (ENSPTIG00000008508)
Panthera_a	ANCESTRAL SPECIES	16	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00510000055281 #20	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00390000000571.b.b	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
lion	MODERN SPECIES	509	CCNE2 (ENSPLOG00000000448)	INTS8 (ENSPLOG00000000486) #7	DPY19L4 (ENSPLOG00000000568) #8	ESRP1 (ENSPLOG00000000760) #9	VIRMA (ENSPLOG00000000910) #10	RAD54B (ENSPLOG00000001032) #11	ENSPLOG00000001069	GEM (ENSPLOG00000001086) #12	CDH17 (ENSPLOG00000001126) #13	PDP1 (ENSPLOG00000001174) #15	TMEM67 (ENSPLOG00000001214) #16	RBM12B (ENSPLOG00000001285) #17	CIBAR1 (ENSPLOG00000001331) #19	TRIQK (ENSPLOG00000001363) #21	ENSPLOG00000001380 #20	RUNX1T1 (ENSPLOG00000001456) #22	ENSPLOG00000001568	SLC26A7 (ENSPLOG00000001595) #23	LRRC69 (ENSPLOG00000001643) #24	OTUD6B (ENSPLOG00000001677) #25	PIP4P2 (ENSPLOG00000001721) #26	C8orf88 (ENSPLOG00000001742) #27	NECAB1 (ENSPLOG00000001753) #28	ENSPLOG00000001781	TMEM64 (ENSPLOG00000001787) #29	CALB1 (ENSPLOG00000001797) #30	DECR1 (ENSPLOG00000001828) #31	NBN (ENSPLOG00000001863) #32	OSGIN2 (ENSPLOG00000001923) #33	RIPK2 (ENSPLOG00000001937) #34	MMP16 (ENSPLOG00000001972) #36
leopard	MODERN SPECIES	24	NDUFAF6 (ENSPPRG00000019798)	TP53INP1 (ENSPPRG00000022199)	CCNE2 (ENSPPRG00000001062)	INTS8 (ENSPPRG00000002272) #7	DPY19L4 (ENSPPRG00000003290) #8	ESRP1 (ENSPPRG00000005067) #9	VIRMA (ENSPPRG00000006662) #10	RAD54B (ENSPPRG00000007571) #11	GEM (ENSPPRG00000008023) #12	CDH17 (ENSPPRG00000009023) #13	PDP1 (ENSPPRG00000009762) #15	TMEM67 (ENSPPRG00000010104) #16	CIBAR1 (ENSPPRG00000014143) #19	ENSPPRG00000017532 #20	TRIQK (ENSPPRG00000019008) #21	RUNX1T1 (ENSPPRG00000022874) #22	ENSPPRG00000017651	SLC26A7 (ENSPPRG00000001892) #23	LRRC69 (ENSPPRG00000002332) #24	OTUD6B (ENSPPRG00000006538) #25	ENSPPRG00000006604	ENSPPRG00000006802	ENSPPRG00000017760	PIP4P2 (ENSPPRG00000007660) #26	C8orf88 (ENSPPRG00000007772) #27	ENSPPRG00000017881	NECAB1 (ENSPPRG00000009640) #28	TMEM64 (ENSPPRG00000010896) #29	CALB1 (ENSPPRG00000011121) #30	DECR1 (ENSPPRG00000011630) #31	NBN (ENSPPRG00000014879) #32
Cat	MODERN SPECIES	249	NDUFAF6 (ENSFCAG00000013012)	TP53INP1 (ENSFCAG00000030998)	CCNE2 (ENSFCAG00000030963)	INTS8 (ENSFCAG00000006104) #7	DPY19L4 (ENSFCAG00000022014) #8	ESRP1 (ENSFCAG00000009920) #9	VIRMA (ENSFCAG00000024620) #10	RAD54B (ENSFCAG00000015513) #11	GEM (ENSFCAG00000015511) #12	CDH17 (ENSFCAG00000015508) #13	PDP1 (ENSFCAG00000043652) #15	TMEM67 (ENSFCAG00000012871) #16	RBM12B (ENSFCAG00000029274) #17	CIBAR1 (ENSFCAG00000023850) #19	TRIQK (ENSFCAG00000041839) #21	RUNX1T1 (ENSFCAG00000030412) #22	ENSFCAG00000037660	SLC26A7 (ENSFCAG00000008754) #23	LRRC69 (ENSFCAG00000032433) #24	OTUD6B (ENSFCAG00000033692) #25	PIP4P2 (ENSFCAG00000043816) #26	C8orf88 (ENSFCAG00000038527) #27	ENSFCAG00000046541	NECAB1 (ENSFCAG00000003667) #28	TMEM64 (ENSFCAG00000025477) #29	CALB1 (ENSFCAG00000005505) #30	DECR1 (ENSFCAG00000005501) #31	NBN (ENSFCAG00000030357) #32	OSGIN2 (ENSFCAG00000023415) #33	RIPK2 (ENSFCAG00000018768) #34	MMP16 (ENSFCAG00000027771) #36
Caniformia	ANCESTRAL SPECIES	23	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00930000152930	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Caniformia_b	ANCESTRAL SPECIES	22	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT01060000249136	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Mustelinae	ANCESTRAL SPECIES	70	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a.n #28
Ferret	MODERN SPECIES	298	TP53INP1 (ENSMPUG00000008800)	CCNE2 (ENSMPUG00000008809)	INTS8 (ENSMPUG00000008816) #7	DPY19L4 (ENSMPUG00000008832) #8	ESRP1 (ENSMPUG00000008838) #9	VIRMA (ENSMPUG00000008850) #10	FSBP (ENSMPUG00000008871)	RAD54B (ENSMPUG00000008878) #11	GEM (ENSMPUG00000009023) #12	CDH17 (ENSMPUG00000009064) #13	PDP1 (ENSMPUG00000009080) #15	TMEM67 (ENSMPUG00000009088) #16	RBM12B (ENSMPUG00000018637) #17	CIBAR1 (ENSMPUG00000009112) #19	TRIQK (ENSMPUG00000009124) #21	RUNX1T1 (ENSMPUG00000009128) #22	SLC26A7 (ENSMPUG00000009145) #23	LRRC69 (ENSMPUG00000009160) #24	OTUD6B (ENSMPUG00000009194) #25	PIP4P2 (ENSMPUG00000009209) #26	ENSMPUG00000009218	NECAB1 (ENSMPUG00000009235) #28
American mink	MODERN SPECIES	195						RP1 (ENSNVIG00000003995)	SOX17 (ENSNVIG00000003990)	ENSNVIG00000003981	MRPL15 (ENSNVIG00000003963)	LYPLA1 (ENSNVIG00000003898)	ENSNVIG00000003892	TCEA1 (ENSNVIG00000003798)	RGS20 (ENSNVIG00000003730)	ATP6V1H (ENSNVIG00000003634)	TRIQK (ENSNVIG00000003571) #21	RUNX1T1 (ENSNVIG00000003144) #22	ENSNVIG00000003105	SLC26A7 (ENSNVIG00000003049) #23	LRRC69 (ENSNVIG00000003020) #24	OTUD6B (ENSNVIG00000003004) #25	TM55A (ENSNVIG00000002974) #26	C8orf88 (ENSNVIG00000002953) #27	ENSNVIG00000002940 #28
Ursidae	ANCESTRAL SPECIES	26	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00510000046985.i	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Ursus	ANCESTRAL SPECIES	84	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00510000046985.i	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a	ENSGT00940000154968
Polar bear	MODERN SPECIES	156	CCNE2 (ENSUMAG00000016622)	INTS8 (ENSUMAG00000016610) #7	DPY19L4 (ENSUMAG00000016525) #8	ESRP1 (ENSUMAG00000016474) #9	ENSUMAG00000016465	VIRMA (ENSUMAG00000016435) #10	FSBP (ENSUMAG00000016424)	RAD54B (ENSUMAG00000016401) #11	GEM (ENSUMAG00000016376) #12	CDH17 (ENSUMAG00000016167) #13	PDP1 (ENSUMAG00000016109) #15	TMEM67 (ENSUMAG00000016030) #16	RBM12B (ENSUMAG00000016008) #17	CIBAR1 (ENSUMAG00000015968) #19	TRIQK (ENSUMAG00000015955) #21	RUNX1T1 (ENSUMAG00000015626) #22	ENSUMAG00000015543	SLC26A7 (ENSUMAG00000015520) #23	LRRC69 (ENSUMAG00000015510) #24	OTUD6B (ENSUMAG00000015497) #25	PIP4P2 (ENSUMAG00000015489) #26	C8orf88 (ENSUMAG00000015481) #27	ENSUMAG00000015476 #28	ENSUMAG00000015459 #29	CALB1 (ENSUMAG00000015435) #30	DECR1 (ENSUMAG00000015421) #31	NBN (ENSUMAG00000015323) #32	OSGIN2 (ENSUMAG00000015314) #33	RIPK2 (ENSUMAG00000015288) #34	MMP16 (ENSUMAG00000015249) #36	CNGB3 (ENSUMAG00000015239)
American black bear	MODERN SPECIES	3425																RUNX1T1 (ENSUAMG00000003256) #22
Giant Panda	MODERN SPECIES	19	CCNE2 (ENSAMEG00000005590)	INTS8 (ENSAMEG00000005646) #7	DPY19L4 (ENSAMEG00000005702) #8	ESRP1 (ENSAMEG00000005723) #9	ENSAMEG00000025034	VIRMA (ENSAMEG00000005860) #10	RAD54B (ENSAMEG00000005834) #11	GEM (ENSAMEG00000005822) #12	CDH17 (ENSAMEG00000012449) #13	ENSAMEG00000024252	PDP1 (ENSAMEG00000012445) #15	TMEM67 (ENSAMEG00000007154) #16	RBM12B (ENSAMEG00000025025) #17	ENSAMEG00000007117 #19	TRIQK (ENSAMEG00000007110) #21	RUNX1T1 (ENSAMEG00000007013) #22	ENSAMEG00000007009	SLC26A7 (ENSAMEG00000006995) #23	LRRC69 (ENSAMEG00000006987) #24	OTUD6B (ENSAMEG00000006971) #25	PIP4P2 (ENSAMEG00000006966) #26	C8orf88 (ENSAMEG00000024938) #27	NECAB1 (ENSAMEG00000014928) #28	ENSAMEG00000014935	CALB1 (ENSAMEG00000014944) #30	DECR1 (ENSAMEG00000014999) #31	NBN (ENSAMEG00000015005) #32	OSGIN2 (ENSAMEG00000015063) #33	RIPK2 (ENSAMEG00000015077) #34	MMP16 (ENSAMEG00000017143) #36	CNBD1 (ENSAMEG00000017142)
Canidae	ANCESTRAL SPECIES	42	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Canis_lupus	ANCESTRAL SPECIES	37	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Dog	MODERN SPECIES	21	NDUFAF6 (ENSCAFG00845016345)	TP53INP1 (ENSCAFG00845016236)	CCNE2 (ENSCAFG00845016153)	INTS8 (ENSCAFG00845016039) #7	DPY19L4 (ENSCAFG00845015605) #8	ESRP1 (ENSCAFG00845015323) #9	VIRMA (ENSCAFG00845015063) #10	RAD54B (ENSCAFG00845014874) #11	GEM (ENSCAFG00845014817) #12	CDH17 (ENSCAFG00845014632) #13	PDP1 (ENSCAFG00845014567) #15	TMEM67 (ENSCAFG00845014512) #16	RBM12B (ENSCAFG00845014482) #17	CIBAR1 (ENSCAFG00845014459) #19	ENSCAFG00845021945 #21	RUNX1T1 (ENSCAFG00845021248) #22	ENSCAFG00845020927	SLC26A7 (ENSCAFG00845020813) #23	LRRC69 (ENSCAFG00845020675) #24	OTUD6B (ENSCAFG00845020571) #25	ENSCAFG00845020431 #26	C8orf88 (ENSCAFG00845020369) #27	NECAB1 (ENSCAFG00845020193) #28	TMEM64 (ENSCAFG00845019978) #29	CALB1 (ENSCAFG00845019845) #30	DECR1 (ENSCAFG00845019648) #31	NBN (ENSCAFG00845019442) #32	OSGIN2 (ENSCAFG00845019231) #33	RIPK2 (ENSCAFG00845018948) #34	ENSCAFG00845018832	MMP16 (ENSCAFG00845018720) #36
Dingo	MODERN SPECIES	293	TP53INP1 (ENSCAFG00020009749)	CCNE2 (ENSCAFG00020009760)	INTS8 (ENSCAFG00020009921) #7	DPY19L4 (ENSCAFG00020010847) #8	ESRP1 (ENSCAFG00020010882) #9	VIRMA (ENSCAFG00020011073) #10	RAD54B (ENSCAFG00020012084) #11	FSBP (ENSCAFG00020012090)	GEM (ENSCAFG00020012092) #12	CDH17 (ENSCAFG00020012112) #13	PDP1 (ENSCAFG00020012132) #15	TMEM67 (ENSCAFG00020012146) #16	RBM12B (ENSCAFG00020012203) #17	CIBAR1 (ENSCAFG00020012209) #19	TRIQK (ENSCAFG00020012222) #21	RUNX1T1 (ENSCAFG00020012225) #22	SLC26A7 (ENSCAFG00020012231) #23	LRRC69 (ENSCAFG00020012261) #24	OTUD6B (ENSCAFG00020012272) #25	PIP4P2 (ENSCAFG00020012274) #26	C8orf88 (ENSCAFG00020012277) #27	NECAB1 (ENSCAFG00020012286) #28	CALB1 (ENSCAFG00020012291) #30	DECR1 (ENSCAFG00020012300) #31	NBN (ENSCAFG00020012307) #32	OSGIN2 (ENSCAFG00020012317) #33	ENSCAFG00020012323 #34	ENSCAFG00020012331 #34	MMP16 (ENSCAFG00020012348) #36	CNBD1 (ENSCAFG00020012371)	CNGB3 (ENSCAFG00020012387)
Red fox	MODERN SPECIES	3	TP53INP1 (ENSVVUG00000003119)	CCNE2 (ENSVVUG00000003111)	INTS8 (ENSVVUG00000003083) #7	DPY19L4 (ENSVVUG00000003044) #8	ESRP1 (ENSVVUG00000002900) #9	VIRMA (ENSVVUG00000002835) #10	ENSVVUG00000002830	FSBP (ENSVVUG00000002829)	GEM (ENSVVUG00000002821) #12	CDH17 (ENSVVUG00000002787) #13	PDP1 (ENSVVUG00000002781) #15	TMEM67 (ENSVVUG00000002722) #16	RBM12B (ENSVVUG00000002694) #17	ENSVVUG00000002691 #19	TRIQK (ENSVVUG00000002665) #21	RUNX1T1 (ENSVVUG00000002591) #22	ENSVVUG00000002542	SLC26A7 (ENSVVUG00000002425) #23	LRRC69 (ENSVVUG00000002394) #24	OTUD6B (ENSVVUG00000002386) #25	PIP4P2 (ENSVVUG00000002368) #26	C8orf88 (ENSVVUG00000002350) #27	ENSVVUG00000002332 #28	ENSVVUG00000002246 #29	CALB1 (ENSVVUG00000002228) #30	ENSVVUG00000002146 #31	NBN (ENSVVUG00000002057) #32	OSGIN2 (ENSVVUG00000002034) #33	RIPK2 (ENSVVUG00000002006) #34	ENSVVUG00000001968	MMP16 (ENSVVUG00000001923) #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000183176.b.f #22
Hedgehog	MODERN SPECIES	8789																RUNX1T1 (ENSEEUG00000004013) #22
Common shrew	MODERN SPECIES	6677																RUNX1T1 (ENSSARG00000009755) #22
Atlantogenata	ANCESTRAL SPECIES	20	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Xenarthra	ANCESTRAL SPECIES	9	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00470000042499	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154968	ENSGT00950000182992.a.b.b
Armadillo	MODERN SPECIES	3295	DPY19L4 (ENSDNOG00000018518) #8	ESRP1 (ENSDNOG00000015648) #9	VIRMA (ENSDNOG00000000495) #10	RAD54B (ENSDNOG00000015535) #11	FSBP (ENSDNOG00000037552)	ENSDNOG00000034384	GEM (ENSDNOG00000025046) #12	CDH17 (ENSDNOG00000030738) #13	PDP1 (ENSDNOG00000047624) #15	TMEM67 (ENSDNOG00000013892) #16	ENSDNOG00000046867	ENSDNOG00000041087	RBM12B (ENSDNOG00000041608) #17	CIBAR1 (ENSDNOG00000013822) #19	TRIQK (ENSDNOG00000019786) #21	RUNX1T1 (ENSDNOG00000030709) #22	ENSDNOG00000047390	SLC26A7 (ENSDNOG00000015538) #23	LRRC69 (ENSDNOG00000024272) #24	ENSDNOG00000032119 #25	PIP4P2 (ENSDNOG00000019478) #26	C8orf88 (ENSDNOG00000042167) #27	NECAB1 (ENSDNOG00000016197) #28	ENSDNOG00000018952	TMEM64 (ENSDNOG00000004256) #29	ENSDNOG00000039191	CALB1 (ENSDNOG00000044661) #30	DECR1 (ENSDNOG00000043391) #31	NBN (ENSDNOG00000010843) #32	OSGIN2 (ENSDNOG00000039511) #33	RIPK2 (ENSDNOG00000038605) #34
Sloth	MODERN SPECIES	7938																RUNX1T1 (ENSCHOG00000000273) #22
Afrotheria	ANCESTRAL SPECIES	10	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a	ENSGT00940000154968	ENSGT00950000182992.a.b.b
Tenrec	MODERN SPECIES	8078																RUNX1T1 (ENSETEG00000014837) #22
Afrotheria_a	ANCESTRAL SPECIES	10	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a	ENSGT00940000154968	ENSGT00950000182992.a.b.b
Elephant	MODERN SPECIES	567	TP53INP1 (ENSLAFG00000001509)	CCNE2 (ENSLAFG00000001507)	INTS8 (ENSLAFG00000001503) #7	DPY19L4 (ENSLAFG00000001500) #8	ESRP1 (ENSLAFG00000001498) #9	VIRMA (ENSLAFG00000015325) #10	FSBP (ENSLAFG00000015324)	RAD54B (ENSLAFG00000015315) #11	GEM (ENSLAFG00000003096) #12	CDH17 (ENSLAFG00000007754) #13	PDP1 (ENSLAFG00000010019) #15	TMEM67 (ENSLAFG00000003950) #16	RBM12B (ENSLAFG00000029949) #17	CIBAR1 (ENSLAFG00000003954) #19	TRIQK (ENSLAFG00000017857) #21	RUNX1T1 (ENSLAFG00000005779) #22	SLC26A7 (ENSLAFG00000016880) #23	ENSLAFG00000020788	OTUD6B (ENSLAFG00000011002) #25	PIP4P2 (ENSLAFG00000010999) #26	NECAB1 (ENSLAFG00000002467) #28	TMEM64 (ENSLAFG00000032281) #29	CALB1 (ENSLAFG00000007269) #30	DECR1 (ENSLAFG00000007265) #31	ENSLAFG00000017473 #32	OSGIN2 (ENSLAFG00000001821) #33	RIPK2 (ENSLAFG00000004949) #34	MMP16 (ENSLAFG00000009808) #36	ENSLAFG00000005635	CNGB3 (ENSLAFG00000003362)	CPNE3 (ENSLAFG00000012140)
Hyrax	MODERN SPECIES	7480																RUNX1T1 (ENSPCAG00000009770) #22
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000154960	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c.ec.b #19	ENSGT00390000010285.c.dc #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000154960	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00390000001688	ENSGT00940000154824.a
Diprotodontia	ANCESTRAL SPECIES	36	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c.ec.b #19	ENSGT00390000010285.c.dc #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000154960	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29
Diprotodontia_a	ANCESTRAL SPECIES	35	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c.ec.b #19	ENSGT00390000010285.c.dc #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000154960	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29
koala	MODERN SPECIES	232								CDH17 (ENSPCIG00000016712) #13	PDP1 (ENSPCIG00000033924) #15	TMEM67 (ENSPCIG00000037233) #16	RBM12B (ENSPCIG00000008556) #17	ENSPCIG00000023335 #19	ENSPCIG00000030292	TRIQK (ENSPCIG00000033155) #21	ENSPCIG00000015858	RUNX1T1 (ENSPCIG00000011101) #22	ENSPCIG00000011113	SLC26A7 (ENSPCIG00000007617) #23	ENSPCIG00000034942	OTUD6B (ENSPCIG00000007606) #25	PIP4P2 (ENSPCIG00000007601) #26	C8orf88 (ENSPCIG00000007595) #27	NECAB1 (ENSPCIG00000033118) #28	TMEM64 (ENSPCIG00000024149) #29
Common wonbat	MODERN SPECIES	742	INTS8 (ENSVURG00010017948) #7	DPY19L4 (ENSVURG00010017977) #8	ESRP1 (ENSVURG00010018002) #9	VIRMA (ENSVURG00010018015) #10	RAD54B (ENSVURG00010000097) #11	ENSVURG00010000114	FSBP (ENSVURG00010000131)	GEM (ENSVURG00010000154) #12	CDH17 (ENSVURG00010000194) #13	PDP1 (ENSVURG00010000524) #15	TMEM67 (ENSVURG00010000550) #16	RBM12B (ENSVURG00010000630) #17	ENSVURG00010000638 #19	ENSVURG00010000651 #19	TRIQK (ENSVURG00010000677) #21	RUNX1T1 (ENSVURG00010000776) #22	SLC26A7 (ENSVURG00010000974) #23	ENSVURG00010000989	ENSVURG00010001005	OTUD6B (ENSVURG00010001022) #25	PIP4P2 (ENSVURG00010001038) #26	C8orf88 (ENSVURG00010001051) #27	ENSVURG00010001058 #28	ENSVURG00010001080	ENSVURG00010001089 #29
Wallaby	MODERN SPECIES	314																RUNX1T1 (ENSMEUG00000011036) #22
Tasmanian devil	MODERN SPECIES		TP53INP1 (ENSSHAG00000028179)	CCNE2 (ENSSHAG00000017844)	INTS8 (ENSSHAG00000017754) #7	DPY19L4 (ENSSHAG00000017668) #8	ESRP1 (ENSSHAG00000030981) #9	VIRMA (ENSSHAG00000017298) #10	RAD54B (ENSSHAG00000017038) #11	GEM (ENSSHAG00000016768) #12	CDH17 (ENSSHAG00000016528) #13	PDP1 (ENSSHAG00000016028) #15	TMEM67 (ENSSHAG00000015417) #16	RBM12B (ENSSHAG00000015335) #17	CIBAR1 (ENSSHAG00000015216) #19	ENSSHAG00000000609	ENSSHAG00000012866	RUNX1T1 (ENSSHAG00000008351) #22	ENSSHAG00000020462	SLC26A7 (ENSSHAG00000014607) #23	OTUD6B (ENSSHAG00000013420) #25	PIP4P2 (ENSSHAG00000012741) #26	C8orf88 (ENSSHAG00000030494) #27	NECAB1 (ENSSHAG00000012037) #28	TMEM64 (ENSSHAG00000028654) #29	CALB1 (ENSSHAG00000025646) #30	DECR1 (ENSSHAG00000003375) #31	NBN (ENSSHAG00000001663) #32	OSGIN2 (ENSSHAG00000000911) #33	RIPK2 (ENSSHAG00000014513) #34	ENSSHAG00000022369	MMP16 (ENSSHAG00000003247) #36	ENSSHAG00000011704
Opossum	MODERN SPECIES	2	INTS8 (ENSMODG00000007099) #7	DPY19L4 (ENSMODG00000007155) #8	ESRP1 (ENSMODG00000007268) #9	VIRMA (ENSMODG00000007320) #10	FSBP (ENSMODG00000007330)	RAD54B (ENSMODG00000007343) #11	GEM (ENSMODG00000007348) #12	CDH17 (ENSMODG00000007386) #13	PDP1 (ENSMODG00000039514) #15	TMEM67 (ENSMODG00000007431) #16	RBM12B (ENSMODG00000007436) #17	ENSMODG00000007447 #19	ENSMODG00000046414	ENSMODG00000028668	TRIQK (ENSMODG00000024567) #21	RUNX1T1 (ENSMODG00000007500) #22	ENSMODG00000040659	ENSMODG00000029086	SLC26A7 (ENSMODG00000007528) #23	ENSMODG00000024575	ENSMODG00000007537	ENSMODG00000007551 #25	PIP4P2 (ENSMODG00000007561) #26	C8orf88 (ENSMODG00000047666) #27	NECAB1 (ENSMODG00000007570) #28	TMEM64 (ENSMODG00000007607) #29	ENSMODG00000047647	ENSMODG00000007612	CALB1 (ENSMODG00000007628) #30	DECR1 (ENSMODG00000007644) #31	ENSMODG00000007677 #32
Platypus	MODERN SPECIES	15	ENSOANG00000043957	CCNE2 (ENSOANG00000043394)	INTS8 (ENSOANG00000002217) #7	ENSOANG00000002218	DPY19L4 (ENSOANG00000002219) #8	ESRP1 (ENSOANG00000004746) #9	VIRMA (ENSOANG00000011351) #10	RAD54B (ENSOANG00000011348) #11	GEM (ENSOANG00000046330) #12	CDH17 (ENSOANG00000006257) #13	PDP1 (ENSOANG00000007880) #15	TMEM67 (ENSOANG00000049606) #16	ENSOANG00000015735 #17	CIBAR1 (ENSOANG00000050166) #19	ENSOANG00000045975	RUNX1T1 (ENSOANG00000001913) #22	SLC26A7 (ENSOANG00000041035) #23	ENSOANG00000029483	OTUD6B (ENSOANG00000048050) #25	PIP4P2 (ENSOANG00000049096) #26	C8orf88 (ENSOANG00000050923) #27	NECAB1 (ENSOANG00000042291) #28	TMEM64 (ENSOANG00000049337) #29	CALB1 (ENSOANG00000011998) #30	DECR1 (ENSOANG00000011997) #31	NBN (ENSOANG00000001316) #32	OSGIN2 (ENSOANG00000004602) #33	RIPK2 (ENSOANG00000048765) #34	MMP16 (ENSOANG00000002138) #36	ENSOANG00000049646	CNGB3 (ENSOANG00000011593)
Sauria	ANCESTRAL SPECIES		ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a
Archelosauria	ANCESTRAL SPECIES	5	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a
Archosauria	ANCESTRAL SPECIES		ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a
Aves	ANCESTRAL SPECIES	9	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a	ENSGT00940000154968
Neognathae	ANCESTRAL SPECIES		ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a	ENSGT00940000154968
Galloanserae	ANCESTRAL SPECIES		ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a	ENSGT00940000154968
Anatidae	ANCESTRAL SPECIES	3	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a	ENSGT00940000154968
Duck	MODERN SPECIES	10	INTS8 (ENSAPLG00000007030) #7	ENSAPLG00000006639	DPY19L4 (ENSAPLG00000006172) #8	ESRP1 (ENSAPLG00000013868) #9	VIRMA (ENSAPLG00000014267) #10	ENSAPLG00000014357	RAD54B (ENSAPLG00000014366) #11	FSBP (ENSAPLG00000014488)	GEM (ENSAPLG00000014490) #12	CDH17 (ENSAPLG00000014890) #13	PDP1 (ENSAPLG00000001130) #15	TMEM67 (ENSAPLG00000001214) #16	RBM12B (ENSAPLG00000002020) #17	CIBAR1 (ENSAPLG00000015090) #19	TRIQK (ENSAPLG00000021039) #21	RUNX1T1 (ENSAPLG00000011326) #22	SLC26A7 (ENSAPLG00000011993) #23	OTUD6B (ENSAPLG00000012136) #25	PIP4P2 (ENSAPLG00000012413) #26	NECAB1 (ENSAPLG00000012515) #28	TMEM64 (ENSAPLG00000012726) #29	CALB1 (ENSAPLG00000005891) #30	DECR1 (ENSAPLG00000006309) #31	NBN (ENSAPLG00000006440) #32	OSGIN2 (ENSAPLG00000006564) #33	ENSAPLG00000006772	RIPK2 (ENSAPLG00000006833) #34	SLC30A8 (ENSAPLG00000014913)	MED30 (ENSAPLG00000014888)	EXT1 (ENSAPLG00000009944)	SAMD12 (ENSAPLG00000009933)
Pink-footed goose	MODERN SPECIES	29	DPY19L4 (ENSABRG00000016968) #8	ENSABRG00000016954	ESRP1 (ENSABRG00000016946) #9	VIRMA (ENSABRG00000016556) #10	ENSABRG00000016506	FSBP (ENSABRG00000016501)	RAD54B (ENSABRG00000016491) #11	GEM (ENSABRG00000016481) #12	CDH17 (ENSABRG00000016474) #13	PDP1 (ENSABRG00000016471) #15	TMEM67 (ENSABRG00000016458) #16	RBM12B (ENSABRG00000016453) #17	CIBAR1 (ENSABRG00000016450) #19	TRIQK (ENSABRG00000016439) #21	ENSABRG00000016432	RUNX1T1 (ENSABRG00000016409) #22	SLC26A7 (ENSABRG00000016396) #23	OTUD6B (ENSABRG00000016395) #25	PIP4P2 (ENSABRG00000016388) #26	C8orf88 (ENSABRG00000016374) #27	NECAB1 (ENSABRG00000016366) #28	TMEM64 (ENSABRG00000016360) #29	CALB1 (ENSABRG00000016349) #30	DECR1 (ENSABRG00000016339) #31	NBN (ENSABRG00000016327) #32	OSGIN2 (ENSABRG00000016318) #33	ENSABRG00000016306	RIPK2 (ENSABRG00000016298) #34	MMP16 (ENSABRG00000016286) #36	CNGB3 (ENSABRG00000016209)	CPNE3 (ENSABRG00000015747)
Phasianidae	DUPLICATION
Phasianidae	ANCESTRAL SPECIES	1	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f.a #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a	ENSGT00940000154968
Japanese quail	MODERN SPECIES	11	ENSCJPG00005000614	DPY19L4 (ENSCJPG00005000587) #8	ENSCJPG00005000576	ESRP1 (ENSCJPG00005000569) #9	VIRMA (ENSCJPG00005000561) #10	ENSCJPG00005000553	FSBP (ENSCJPG00005000549)	RAD54B (ENSCJPG00005000540) #11	GEM (ENSCJPG00005000534) #12	CDH17 (ENSCJPG00005000528) #13	PDP1 (ENSCJPG00005000526) #15	TMEM67 (ENSCJPG00005000497) #16	RBM12B (ENSCJPG00005000490) #17	ENSCJPG00005000484 #19	TRIQK (ENSCJPG00005000478) #21	RUNX1T1 (ENSCJPG00005000447) #22	SLC26A7 (ENSCJPG00005000419) #23	OTUD6B (ENSCJPG00005000403) #25	PIP4P2 (ENSCJPG00005000392) #26	NECAB1 (ENSCJPG00005000385) #28	TMEM64 (ENSCJPG00005000382) #29	CALB1 (ENSCJPG00005000373) #30	DECR1 (ENSCJPG00005000371) #31	NBN (ENSCJPG00005000362) #32	OSGIN2 (ENSCJPG00005000353) #33	ENSCJPG00005000343	RIPK2 (ENSCJPG00005000334) #34	MMP16 (ENSCJPG00005000314) #36	CNGB3 (ENSCJPG00005000278)	CPNE3 (ENSCJPG00005000262)	RMDN1 (ENSCJPG00005000253)
Phasianidae_b	ANCESTRAL SPECIES	1	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f.a #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a	ENSGT00940000154968
Turkey	DUPLICATION
Turkey	MODERN SPECIES	22	VIRMA (ENSMGAG00000012036) #10	ENSMGAG00000012030	FSBP (ENSMGAG00000012035)	RAD54B (ENSMGAG00000012024) #11	GEM (ENSMGAG00000012020) #12	CDH17 (ENSMGAG00000012005) #13	TRIQK (ENSMGAG00000011979) #21	RBM12B (ENSMGAG00000011985) #17	ENSMGAG00000011983 #19	ENSMGAG00000020866 #19	TMEM67 (ENSMGAG00000011988) #16	ENSMGAG00000022111 #16	ENSMGAG00000015854 #15	ENSMGAG00000019884	ENSMGAG00000018021 #22	ENSMGAG00000019967 #22	ENSMGAG00000020110 #22	ENSMGAG00000011842 #34	ENSMGAG00000011846	OSGIN2 (ENSMGAG00000011864) #33	CALB1 (ENSMGAG00000011897) #30	ENSMGAG00000011884 #31	ENSMGAG00000011871 #32	TMEM64 (ENSMGAG00000011915) #29	ENSMGAG00000011916 #28	PIP4P2 (ENSMGAG00000011928) #26	ENSMGAG00000011941 #23	ENSMGAG00000011937 #25	ENSMGAG00000021460	ENSMGAG00000017557	ENSMGAG00000001064
Turkey	MODERN SPECIES	22	ENSMGAG00000012030	FSBP (ENSMGAG00000012035)	RAD54B (ENSMGAG00000012024) #11	GEM (ENSMGAG00000012020) #12	CDH17 (ENSMGAG00000012005) #13	TRIQK (ENSMGAG00000011979) #21	RBM12B (ENSMGAG00000011985) #17	ENSMGAG00000011983 #19	ENSMGAG00000020866 #19	TMEM67 (ENSMGAG00000011988) #16	ENSMGAG00000022111 #16	ENSMGAG00000015854 #15	ENSMGAG00000019884	ENSMGAG00000018021 #22	ENSMGAG00000019967 #22	ENSMGAG00000020110 #22	ENSMGAG00000011842 #34	ENSMGAG00000011846	OSGIN2 (ENSMGAG00000011864) #33	CALB1 (ENSMGAG00000011897) #30	ENSMGAG00000011884 #31	ENSMGAG00000011871 #32	TMEM64 (ENSMGAG00000011915) #29	ENSMGAG00000011916 #28	PIP4P2 (ENSMGAG00000011928) #26	ENSMGAG00000011941 #23	ENSMGAG00000011937 #25	ENSMGAG00000021460	ENSMGAG00000017557	ENSMGAG00000001064	ENSMGAG00000011695
Chicken	MODERN SPECIES	11	ENSGALG00010012347	DPY19L4 (ENSGALG00010012320) #8	ENSGALG00010013419	ESRP1 (ENSGALG00010012304) #9	KIAA1429 (ENSGALG00010012275) #10	ENSGALG00010012245	FSBP (ENSGALG00010012229)	RAD54B (ENSGALG00010012212) #11	GEM (ENSGALG00010012200) #12	CDH17 (ENSGALG00010012171) #13	PDP1 (ENSGALG00010012163) #15	TMEM67 (ENSGALG00010012130) #16	RBM12B (ENSGALG00010012116) #17	CIBAR1 (ENSGALG00010012086) #19	TRIQK (ENSGALG00010010989) #21	RUNX1T1 (ENSGALG00010011273) #22	SLC26A7 (ENSGALG00010011154) #23	OTUD6A (ENSGALG00010011086) #25	TMEM55A (ENSGALG00010011062) #26	C8orf88 (ENSGALG00010011037) #27	NECAB1 (ENSGALG00010011019) #28	TMEM64 (ENSGALG00010011006) #29	CALB1 (ENSGALG00010012850) #30	ENSGALG00010012831	DECR1 (ENSGALG00010012812) #31	NBN (ENSGALG00010012671) #32	OSGIN2 (ENSGALG00010012561) #33	SLC7A7 (ENSGALG00010012483)	RIPK2 (ENSGALG00010012401) #34	MMP16 (ENSGALG00010012390) #36	CNGB3 (ENSGALG00010010863)
Phasianidae	ANCESTRAL SPECIES																	ENSGT00950000183176.b.f.b #22
Phasianidae_b	ANCESTRAL SPECIES																	ENSGT00950000183176.b.f.b #22
Turkey	MODERN SPECIES	22	ESRP1 (ENSMGAG00000012042) #9	VIRMA (ENSMGAG00000012036) #10	ENSMGAG00000012030	FSBP (ENSMGAG00000012035)	RAD54B (ENSMGAG00000012024) #11	GEM (ENSMGAG00000012020) #12	CDH17 (ENSMGAG00000012005) #13	TRIQK (ENSMGAG00000011979) #21	RBM12B (ENSMGAG00000011985) #17	ENSMGAG00000011983 #19	ENSMGAG00000020866 #19	TMEM67 (ENSMGAG00000011988) #16	ENSMGAG00000022111 #16	ENSMGAG00000015854 #15	ENSMGAG00000019884	ENSMGAG00000018021 #22	ENSMGAG00000019967 #22	ENSMGAG00000020110 #22	ENSMGAG00000011842 #34	ENSMGAG00000011846	OSGIN2 (ENSMGAG00000011864) #33	CALB1 (ENSMGAG00000011897) #30	ENSMGAG00000011884 #31	ENSMGAG00000011871 #32	TMEM64 (ENSMGAG00000011915) #29	ENSMGAG00000011916 #28	PIP4P2 (ENSMGAG00000011928) #26	ENSMGAG00000011941 #23	ENSMGAG00000011937 #25	ENSMGAG00000021460	ENSMGAG00000017557
Neognathae_b	ANCESTRAL SPECIES	3	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a	ENSGT00940000154968
Passeriformes	ANCESTRAL SPECIES		ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a.g.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a	ENSGT00940000154968
Great tit	MODERN SPECIES	11	ENSPMJG00000006853	DPY19L4 (ENSPMJG00000006849) #8	ENSPMJG00000006736	ESRP1 (ENSPMJG00000006729) #9	VIRMA (ENSPMJG00000005766) #10	ENSPMJG00000005755	FSBP (ENSPMJG00000005748)	RAD54B (ENSPMJG00000005737) #11	GEM (ENSPMJG00000005709) #12	CDH17 (ENSPMJG00000005705) #13	PDP1 (ENSPMJG00000005702) #15	TMEM67 (ENSPMJG00000005694) #16	ENSPMJG00000005690 #19	ENSPMJG00000005684 #19	TRIQK (ENSPMJG00000005664) #21	RUNX1T1 (ENSPMJG00000005638) #22	SLC26A7 (ENSPMJG00000005622) #23	OTUD6B (ENSPMJG00000005619) #25	PIP4P2 (ENSPMJG00000005612) #26	C8orf88 (ENSPMJG00000005609) #27	ENSPMJG00000005605 #28	ENSPMJG00000005602 #28	TMEM64 (ENSPMJG00000005598) #29	CALB1 (ENSPMJG00000005591) #30	DECR1 (ENSPMJG00000005588) #31	NBN (ENSPMJG00000005583) #32	OSGIN2 (ENSPMJG00000005580) #33	ENSPMJG00000005574	RIPK2 (ENSPMJG00000005570) #34	MMP16 (ENSPMJG00000005561) #36	CNGB3 (ENSPMJG00000005556)
Passeriformes_d	ANCESTRAL SPECIES		ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a.h #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a	ENSGT00940000154968
Flycatcher	MODERN SPECIES	11	INTS8 (ENSFALG00000005551) #7	ENSFALG00000005523	DPY19L4 (ENSFALG00000005510) #8	ESRP1 (ENSFALG00000005504) #9	VIRMA (ENSFALG00000005497) #10	ENSFALG00000005490	FSBP (ENSFALG00000005482)	RAD54B (ENSFALG00000005467) #11	GEM (ENSFALG00000005451) #12	CDH17 (ENSFALG00000005421) #13	PDP1 (ENSFALG00000028482) #15	TMEM67 (ENSFALG00000005396) #16	RBM12B (ENSFALG00000014893) #17	CIBAR1 (ENSFALG00000005387) #19	TRIQK (ENSFALG00000005375) #21	RUNX1T1 (ENSFALG00000005343) #22	SLC26A7 (ENSFALG00000005313) #23	OTUD6B (ENSFALG00000028593) #25	PIP4P2 (ENSFALG00000005295) #26	C8orf88 (ENSFALG00000014879) #27	NECAB1 (ENSFALG00000005292) #28	TMEM64 (ENSFALG00000005286) #29	CALB1 (ENSFALG00000026415) #30	DECR1 (ENSFALG00000005229) #31	NBN (ENSFALG00000005198) #32	OSGIN2 (ENSFALG00000024491) #33	ENSFALG00000024501	ENSFALG00000025513	RIPK2 (ENSFALG00000005145) #34	MMP16 (ENSFALG00000005115) #36	CNGB3 (ENSFALG00000005081)
Passeriformes_g	ANCESTRAL SPECIES	3	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a.h #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a	ENSGT00940000154968
Passeroidea	ANCESTRAL SPECIES	2	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a.h #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a	ENSGT00940000154968
Common canary	MODERN SPECIES		INTS8 (ENSSCAG00000003735) #7	ENSSCAG00000003710	DPY19L4 (ENSSCAG00000003703) #8	ESRP1 (ENSSCAG00000003617) #9	VIRMA (ENSSCAG00000003304) #10	ENSSCAG00000003240	FSBP (ENSSCAG00000003238)	RAD54B (ENSSCAG00000003232) #11	GEM (ENSSCAG00000003224) #12	CDH17 (ENSSCAG00000003141) #13	PDP1 (ENSSCAG00000003087) #15	TMEM67 (ENSSCAG00000003064) #16	RBM12B (ENSSCAG00000003057) #17	CIBAR1 (ENSSCAG00000003047) #19	TRIQK (ENSSCAG00000003013) #21	RUNX1T1 (ENSSCAG00000002937) #22	SLC26A7 (ENSSCAG00000002887) #23	OTUD6B (ENSSCAG00000002875) #25	PIP4P2 (ENSSCAG00000002864) #26	NECAB1 (ENSSCAG00000002835) #28	TMEM64 (ENSSCAG00000002824) #29	CALB1 (ENSSCAG00000002811) #30	DECR1 (ENSSCAG00000002801) #31	OSGIN2 (ENSSCAG00000002782) #33	ENSSCAG00000002767	RIPK2 (ENSSCAG00000002756) #34	MMP16 (ENSSCAG00000002745) #36	CNGB3 (ENSSCAG00000002700)	CPNE3 (ENSSCAG00000002687)	RMDN1 (ENSSCAG00000002677)	WWP1 (ENSSCAG00000002656)
Zebra finch	MODERN SPECIES	12	DPY19L4 (ENSTGUG00000011910) #8	ENSTGUG00000023324	ESRP1 (ENSTGUG00000011907) #9	VIRMA (ENSTGUG00000011895) #10	ENSTGUG00000011889	FSBP (ENSTGUG00000026292)	RAD54B (ENSTGUG00000011880) #11	GEM (ENSTGUG00000011878) #12	CDH17 (ENSTGUG00000011871) #13	PDP1 (ENSTGUG00000011869) #15	TMEM67 (ENSTGUG00000011862) #16	RBM12B (ENSTGUG00000011860) #17	CIBAR1 (ENSTGUG00000011854) #19	TRIQK (ENSTGUG00000022552) #21	ENSTGUG00000019348	RUNX1T1 (ENSTGUG00000011844) #22	SLC26A7 (ENSTGUG00000011839) #23	OTUD6B (ENSTGUG00000011837) #25	PIP4P2 (ENSTGUG00000011835) #26	C8orf88 (ENSTGUG00000011833) #27	NECAB1 (ENSTGUG00000011832) #28	TMEM64 (ENSTGUG00000011830) #29	CALB1 (ENSTGUG00000011825) #30	DECR1 (ENSTGUG00000011815) #31	NBN (ENSTGUG00000011805) #32	OSGIN2 (ENSTGUG00000011801) #33	ENSTGUG00000011796	RIPK2 (ENSTGUG00000011791) #34	MMP16 (ENSTGUG00000011786) #36	CNGB3 (ENSTGUG00000011777)	RMDN1 (ENSTGUG00000011752)
Medium ground finch	MODERN SPECIES	47	ENSGFOG00000003693	DPY19L4 (ENSGFOG00000003569) #8	ESRP1 (ENSGFOG00000003509) #9	VIRMA (ENSGFOG00000003450) #10	ENSGFOG00000003433	FSBP (ENSGFOG00000003424)	RAD54B (ENSGFOG00000003398) #11	GEM (ENSGFOG00000003380) #12	CDH17 (ENSGFOG00000003331) #13	PDP1 (ENSGFOG00000003310) #15	TMEM67 (ENSGFOG00000003244) #16	RBM12B (ENSGFOG00000003226) #17	CIBAR1 (ENSGFOG00000003204) #19	TRIQK (ENSGFOG00000003187) #21	ENSGFOG00000003168	RUNX1T1 (ENSGFOG00000003138) #22	SLC26A7 (ENSGFOG00000002984) #23	OTUD6B (ENSGFOG00000002957) #25	PIP4P2 (ENSGFOG00000002933) #26	NECAB1 (ENSGFOG00000002890) #28	ENSGFOG00000002874	CALB1 (ENSGFOG00000002216) #30	DECR1 (ENSGFOG00000002159) #31	NBN (ENSGFOG00000002130) #32	OSGIN2 (ENSGFOG00000002120) #33	ENSGFOG00000002107	RIPK2 (ENSGFOG00000002086) #34	MMP16 (ENSGFOG00000002075) #36	CNGB3 (ENSGFOG00000001852)	CPNE3 (ENSGFOG00000001828)	RMDN1 (ENSGFOG00000001810)
Neognathae_c	ANCESTRAL SPECIES	1	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00940000156966 #11	ENSGT00390000008778	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a	ENSGT00940000154968
Golden eagle	MODERN SPECIES	20	ENSACCG00020002411	DPY19L4 (ENSACCG00020002450) #8	ENSACCG00020002466	ESRP1 (ENSACCG00020002497) #9	VIRMA (ENSACCG00020002788) #10	ENSACCG00020002974	RAD54B (ENSACCG00020002995) #11	FSBP (ENSACCG00020003005)	GEM (ENSACCG00020003017) #12	CDH17 (ENSACCG00020003053) #13	PDP1 (ENSACCG00020003093) #15	TMEM67 (ENSACCG00020003112) #16	RBM12B (ENSACCG00020003136) #17	CIBAR1 (ENSACCG00020003152) #19	TRIQK (ENSACCG00020003173) #21	RUNX1T1 (ENSACCG00020003202) #22	ENSACCG00020003235 #23	ENSACCG00020003258 #23	OTUD6B (ENSACCG00020003277) #25	PIP4P2 (ENSACCG00020003298) #26	C8orf88 (ENSACCG00020003316) #27	NECAB1 (ENSACCG00020003333) #28	TMEM64 (ENSACCG00020003354) #29	CALB1 (ENSACCG00020003369) #30	DECR1 (ENSACCG00020003388) #31	NBN (ENSACCG00020003403) #32	OSGIN2 (ENSACCG00020003420) #33	ENSACCG00020003432	RIPK2 (ENSACCG00020003449) #34	MMP16 (ENSACCG00020003468) #36	CNGB3 (ENSACCG00020003532)
Kakapo	MODERN SPECIES		ENSSHBG00005002680	DPY19L4 (ENSSHBG00005002798) #8	ENSSHBG00005002934	ESRP1 (ENSSHBG00005002947) #9	VIRMA (ENSSHBG00005003015) #10	ENSSHBG00005003040	RAD54B (ENSSHBG00005003087) #11	FSBP (ENSSHBG00005003144)	GEM (ENSSHBG00005003158) #12	CDH17 (ENSSHBG00005003186) #13	PDP1 (ENSSHBG00005003212) #15	TMEM67 (ENSSHBG00005003255) #16	RBM12B (ENSSHBG00005003337) #17	CIBAR1 (ENSSHBG00005003347) #19	TRIQK (ENSSHBG00005003373) #21	RUNX1T1 (ENSSHBG00005003393) #22	SLC26A7 (ENSSHBG00005003417) #23	OTUD6B (ENSSHBG00005003445) #25	PIP4P2 (ENSSHBG00005003456) #26	C8orf88 (ENSSHBG00005003469) #27	NECAB1 (ENSSHBG00005003492) #28	TMEM64 (ENSSHBG00005003547) #29	CALB1 (ENSSHBG00005003554) #30	DECR1 (ENSSHBG00005003562) #31	NBN (ENSSHBG00005003579) #32	OSGIN2 (ENSSHBG00005003592) #33	ENSSHBG00005003615	RIPK2 (ENSSHBG00005000012) #34	MMP16 (ENSSHBG00005005822) #36	CNGB3 (ENSSHBG00005005887)	CPNE3 (ENSSHBG00005005979)
African ostrich	MODERN SPECIES	642	ENSSCUG00000009611	DPY19L4 (ENSSCUG00000009623) #8	ESRP1 (ENSSCUG00000009648) #9	VIRMA (ENSSCUG00000009662) #10	ENSSCUG00000009678	RAD54B (ENSSCUG00000009681) #11	FSBP (ENSSCUG00000009683)	ENSSCUG00000009684	GEM (ENSSCUG00000009685) #12	CDH17 (ENSSCUG00000009687) #13	PDP1 (ENSSCUG00000009689) #15	TMEM67 (ENSSCUG00000009691) #16	RBM12B (ENSSCUG00000009695) #17	CIBAR1 (ENSSCUG00000009696) #19	ENSSCUG00000009700	RUNX1T1 (ENSSCUG00000009704) #22	SLC26A7 (ENSSCUG00000009707) #23	OTUD6B (ENSSCUG00000009708) #25
Australian saltwater crocodile	MODERN SPECIES		ENSCPRG00005002520	DPY19L4 (ENSCPRG00005002382) #8	ESRP1 (ENSCPRG00005002356) #9	VIRMA (ENSCPRG00005002337) #10	ENSCPRG00005002331	FSBP (ENSCPRG00005002328)	RAD54B (ENSCPRG00005002323) #11	GEM (ENSCPRG00005002298) #12	CDH17 (ENSCPRG00005002124) #13	PDP1 (ENSCPRG00005002104) #15	TMEM67 (ENSCPRG00005002068) #16	RBM12B (ENSCPRG00005002019) #17	ENSCPRG00005002014 #19	ENSCPRG00005002004 #19	ENSCPRG00005001973	RUNX1T1 (ENSCPRG00005001920) #22	ENSCPRG00005001837 #23	ENSCPRG00005001833 #23	ENSCPRG00005001765	OTUD6B (ENSCPRG00005001763) #25	PIP4P2 (ENSCPRG00005001762) #26	C8orf88 (ENSCPRG00005001759) #27	NECAB1 (ENSCPRG00005001706) #28	TMEM64 (ENSCPRG00005001616) #29	CALB1 (ENSCPRG00005001552) #30	DECR1 (ENSCPRG00005001542) #31	NBN (ENSCPRG00005001535) #32	OSGIN2 (ENSCPRG00005001531) #33	ENSCPRG00005001459	ENSCPRG00005001441	RIPK2 (ENSCPRG00005001428) #34
Cryptodira	ANCESTRAL SPECIES	22	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154136.k.b.e.b
Testudinoidea	ANCESTRAL SPECIES	16	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654.e	ENSGT00940000164654.f	ENSGT00940000156113 #34	ENSGT00940000157532 #36
Testudinidae	ANCESTRAL SPECIES	27	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654.e	ENSGT00390000010554.f	ENSGT00940000157532 #36	ENSGT00940000154824.a
Abingdon island giant tortoise	MODERN SPECIES	2318																RUNX1T1 (ENSCABG00000017841) #22	ENSCABG00000017848 #23	ENSCABG00000017849 #23	ENSCABG00000017850	OTUD6B (ENSCABG00000017852) #25	PIP4P2 (ENSCABG00000017855) #26
Goode s thornscrub tortoise	MODERN SPECIES	11	ENSGEVG00005003178	DPY19L4 (ENSGEVG00005003147) #8	ENSGEVG00005003138	ESRP1 (ENSGEVG00005003113) #9	VIRMA (ENSGEVG00005002709) #10	ENSGEVG00005002556	RAD54B (ENSGEVG00005002531) #11	GEM (ENSGEVG00005002512) #12	CDH17 (ENSGEVG00005002293) #13	PDP1 (ENSGEVG00005002206) #15	TMEM67 (ENSGEVG00005001988) #16	RBM12B (ENSGEVG00005001862) #17	CIBAR1 (ENSGEVG00005001851) #19	TRIQK (ENSGEVG00005001824) #21	ENSGEVG00005001806	RUNX1T1 (ENSGEVG00005001746) #22	ENSGEVG00005001691 #23	ENSGEVG00005001673 #23	OTUD6B (ENSGEVG00005001652) #25	PIP4P2 (ENSGEVG00005001629) #26	C8orf88 (ENSGEVG00005001601) #27	NECAB1 (ENSGEVG00005001555) #28	TMEM64 (ENSGEVG00005001529) #29	CALB1 (ENSGEVG00005001508) #30	DECR1 (ENSGEVG00005001490) #31	NBN (ENSGEVG00005001451) #32	OSGIN2 (ENSGEVG00005001418) #33	ENSGEVG00005001389	RIPK2 (ENSGEVG00005001368) #34	ENSGEVG00005001353	MMP16 (ENSGEVG00005001333) #36
Emydidae	ANCESTRAL SPECIES	15	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654.e	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a
painted turtle	MODERN SPECIES	703	DPY19L4 (ENSCPBG00000006094) #8	ENSCPBG00000006083	ESRP1 (ENSCPBG00000006007) #9	VIRMA (ENSCPBG00000003435) #10	ENSCPBG00000003239	FSBP (ENSCPBG00000003228)	RAD54B (ENSCPBG00000003204) #11	GEM (ENSCPBG00000003189) #12	CDH17 (ENSCPBG00000003123) #13	PDP1 (ENSCPBG00000003104) #15	TMEM67 (ENSCPBG00000003074) #16	RBM12B (ENSCPBG00000003061) #17	CIBAR1 (ENSCPBG00000003035) #19	TRIQK (ENSCPBG00000003013) #21	ENSCPBG00000002997	RUNX1T1 (ENSCPBG00000002973) #22	SLC26A7 (ENSCPBG00000002908) #23	ENSCPBG00000002878	OTUD6B (ENSCPBG00000002864) #25	PIP4P2 (ENSCPBG00000002850) #26	C8orf88 (ENSCPBG00000002825) #27	NECAB1 (ENSCPBG00000002796) #28	TMEM64 (ENSCPBG00000002776) #29	CDH10 (ENSCPBG00000002731)	ENSCPBG00000002716	OGDH (ENSCPBG00000002653)	ZMIZ2 (ENSCPBG00000002557)	ENSCPBG00000002513	PGAM2 (ENSCPBG00000002504)	ENSCPBG00000002499
Three-toed box turtle	MODERN SPECIES	24	ENSTMTG00000000947	DPY19L4 (ENSTMTG00000000867) #8	ENSTMTG00000000835	ESRP1 (ENSTMTG00000000791) #9	VIRMA (ENSTMTG00000000425) #10	ENSTMTG00000000162	FSBP (ENSTMTG00000000142)	RAD54B (ENSTMTG00000000086) #11	GEM (ENSTMTG00000000047) #12	CDH17 (ENSTMTG00000008530) #13	PDP1 (ENSTMTG00000008505) #15	TMEM67 (ENSTMTG00000007830) #16	RBM12B (ENSTMTG00000007751) #17	CIBAR1 (ENSTMTG00000007734) #19	TRIQK (ENSTMTG00000007721) #21	RUNX1T1 (ENSTMTG00000007569) #22	ENSTMTG00000007517 #23	ENSTMTG00000007496 #23	ENSTMTG00000007481	OTUD6B (ENSTMTG00000007468) #25	PIP4P2 (ENSTMTG00000007446) #26	C8orf88 (ENSTMTG00000007426) #27	NECAB1 (ENSTMTG00000007388) #28	TMEM64 (ENSTMTG00000007374) #29	CALB1 (ENSTMTG00000007338) #30	DECR1 (ENSTMTG00000007322) #31	NBN (ENSTMTG00000007216) #32	OSGIN2 (ENSTMTG00000007195) #33	ENSTMTG00000007135	RIPK2 (ENSTMTG00000007089) #34	MMP16 (ENSTMTG00000007046) #36
Chinese turtle	MODERN SPECIES	116		ESRP1 (ENSPSIG00000002371) #9	VIRMA (ENSPSIG00000002374) #10	ENSPSIG00000002378	RAD54B (ENSPSIG00000002383) #11	FSBP (ENSPSIG00000002390)	GEM (ENSPSIG00000002392) #12	CDH17 (ENSPSIG00000002395) #13	PDP1 (ENSPSIG00000002405) #15	TMEM67 (ENSPSIG00000002407) #16	RBM12B (ENSPSIG00000001348) #17	CIBAR1 (ENSPSIG00000002412) #19	ENSPSIG00000001355	TRIQK (ENSPSIG00000002418) #21	ENSPSIG00000001364	RUNX1T1 (ENSPSIG00000002423) #22	SLC26A7 (ENSPSIG00000002434) #23	ENSPSIG00000002439	OTUD6B (ENSPSIG00000002441) #25	PIP4P2 (ENSPSIG00000002473) #26
Lepidosauria	ANCESTRAL SPECIES	2	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606.ab #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a
Episquamata	ANCESTRAL SPECIES	1	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606.ab #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a
Laterata	ANCESTRAL SPECIES	5	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606.ab #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT01030000234950	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36	ENSGT00940000154824.a
Common wall lizard	MODERN SPECIES	15	ENSPMRG00000021636	DPY19L4 (ENSPMRG00000006294) #8	ENSPMRG00000006427	ESRP1 (ENSPMRG00000006436) #9	VIRMA (ENSPMRG00000006450) #10	ENSPMRG00000006470	FSBP (ENSPMRG00000006480)	RAD54B (ENSPMRG00000006504) #11	GEM (ENSPMRG00000006547) #12	CDH17 (ENSPMRG00000006558) #13	PDP1 (ENSPMRG00000006586) #15	TMEM67 (ENSPMRG00000006599) #16	RBM12B (ENSPMRG00000006625) #17	CIBAR1 (ENSPMRG00000006628) #19	ENSPMRG00000006633	RUNX1T1 (ENSPMRG00000006647) #22	ENSPMRG00000006672	SLC26A7 (ENSPMRG00000006680) #23	ENSPMRG00000006697	OTUD6B (ENSPMRG00000006699) #25	PIP4P2 (ENSPMRG00000006708) #26	ENSPMRG00000006726 #27	NECAB1 (ENSPMRG00000006740) #28	TMEM64 (ENSPMRG00000006757) #29	CALB1 (ENSPMRG00000006764) #30	DECR1 (ENSPMRG00000006770) #31	NBN (ENSPMRG00000006775) #32	OSGIN2 (ENSPMRG00000006783) #33	ENSPMRG00000006793	RIPK2 (ENSPMRG00000006805) #34	ENSPMRG00000006811
Argentine black and white tegu	MODERN SPECIES	29	ENSSMRG00000009248	ENSSMRG00000009249	ESRP1 (ENSSMRG00000009250) #9	VIRMA (ENSSMRG00000009251) #10	ENSSMRG00000010080	RAD54B (ENSSMRG00000010083) #11	FSBP (ENSSMRG00000010088)	GEM (ENSSMRG00000010089) #12	CDH17 (ENSSMRG00000010091) #13	PDP1 (ENSSMRG00000010368) #15	TMEM67 (ENSSMRG00000010371) #16	RBM12B (ENSSMRG00000010382) #17	CIBAR1 (ENSSMRG00000010383) #19	ENSSMRG00000010413	ENSSMRG00000010448	RUNX1T1 (ENSSMRG00000010492) #22	SLC26A7 (ENSSMRG00000010497) #23	ENSSMRG00000010522	OTUD6B (ENSSMRG00000010523) #25	PIP4P2 (ENSSMRG00000010535) #26	NECAB1 (ENSSMRG00000010536) #28	TMEM64 (ENSSMRG00000010537) #29	CALB1 (ENSSMRG00000010538) #30	DECR1 (ENSSMRG00000010539) #31	NBN (ENSSMRG00000010540) #32	OSGIN2 (ENSSMRG00000010548) #33	ENSSMRG00000010550	ENSSMRG00000010552	RIPK2 (ENSSMRG00000010557) #34	MMP16 (ENSSMRG00000010624) #36	ENSSMRG00000010626
Toxicofera	ANCESTRAL SPECIES	8	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00940000164400	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606.ab #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a.i #28	ENSGT00940000168113	ENSGT00950000183131.b.a.j #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34
Elapidae	ANCESTRAL SPECIES	8	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606.ab #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a.i #28	ENSGT00950000183131.b.a.j #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT00940000157532 #36
Elapidae_a	ANCESTRAL SPECIES	27	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606.ab #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00530000068397 #27	ENSGT00950000183131.b.a.i #28	ENSGT00950000183131.b.a.j #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113.kc.b #34	ENSGT00940000157532 #36
Blue-lipped sea krait	DUPLICATION
Blue-lipped sea krait	DUPLICATION
Blue-lipped sea krait	MODERN SPECIES	627															ENSLLTG00000006749 #22	ENSLLTG00000006735 #22
Blue-lipped sea krait	MODERN SPECIES	627																ENSLLTG00000006749 #22	ENSLLTG00000006735 #22
Blue-lipped sea krait	MODERN SPECIES	660																ENSLLTG00000017463 #22
Acanthophiinae	ANCESTRAL SPECIES	15	ENSGT00530000063829.A	ENSGT00940000156934	ENSGT00390000007597 #7	ENSGT00530000063023.A.b #8	ENSGT00950000185308	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00940000156966 #11	ENSGT00940000157830 #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606.ab #16	ENSGT00940000158322 #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a.i #28	ENSGT00950000183131.b.a.j #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000164654	ENSGT00940000156113.kc.b #34	ENSGT00940000157532 #36	ENSGT00940000154824.a
Eastern brown snake	MODERN SPECIES	30	ESRP1 (ENSPTXG00000005703) #9	VIRMA (ENSPTXG00000005708) #10	ENSPTXG00000006004	ENSPTXG00000006006	FSBP (ENSPTXG00000006007)	RAD54B (ENSPTXG00000006009) #11	GEM (ENSPTXG00000006013) #12	CDH17 (ENSPTXG00000006015) #13	PDP1 (ENSPTXG00000006018) #15	TMEM67 (ENSPTXG00000006024) #16	RBM12B (ENSPTXG00000006168) #17	ENSPTXG00000006169 #19	ENSPTXG00000006170 #19	TRIQK (ENSPTXG00000006171) #21	ENSPTXG00000006172	RUNX1T1 (ENSPTXG00000006173) #22	SLC26A7 (ENSPTXG00000006176) #23	OTUD6B (ENSPTXG00000006190) #25	PIP4P2 (ENSPTXG00000006192) #26	ENSPTXG00000006193 #28	ENSPTXG00000006194 #28	TMEM64 (ENSPTXG00000006196) #29	CALB1 (ENSPTXG00000006197) #30	DECR1 (ENSPTXG00000006199) #31	NBN (ENSPTXG00000006200) #32	OSGIN2 (ENSPTXG00000006201) #33	ENSPTXG00000006202	RIPK2 (ENSPTXG00000006203) #34	MMP16 (ENSPTXG00000006204) #36	CNGB3 (ENSPTXG00000006212)	CPNE3 (ENSPTXG00000006214)
Mainland tiger snake	MODERN SPECIES	5	INTS8 (ENSNSUG00000012739) #7	DPY19L4 (ENSNSUG00000013070) #8	ENSNSUG00000013071	ESRP1 (ENSNSUG00000013072) #9	VIRMA (ENSNSUG00000013073) #10	RAD54B (ENSNSUG00000013275) #11	FSBP (ENSNSUG00000013278)	GEM (ENSNSUG00000013280) #12	CDH17 (ENSNSUG00000013281) #13	PDP1 (ENSNSUG00000013288) #15	TMEM67 (ENSNSUG00000013291) #16	RBM12B (ENSNSUG00000013293) #17	ENSNSUG00000013294 #19	ENSNSUG00000013295 #19	TRIQK (ENSNSUG00000013296) #21	RUNX1T1 (ENSNSUG00000013297) #22	SLC26A7 (ENSNSUG00000013379) #23	ENSNSUG00000013380	OTUD6B (ENSNSUG00000013381) #25	PIP4P2 (ENSNSUG00000013382) #26	ENSNSUG00000013383 #28	ENSNSUG00000013384 #28	TMEM64 (ENSNSUG00000013385) #29	CALB1 (ENSNSUG00000013386) #30	DECR1 (ENSNSUG00000013505) #31	NBN (ENSNSUG00000013509) #32	OSGIN2 (ENSNSUG00000013547) #33	ENSNSUG00000013548	ENSNSUG00000013574 #34	ENSNSUG00000013575 #34	MMP16 (ENSNSUG00000013578) #36
Indian cobra	MODERN SPECIES	2	INTS8 (ENSNNAG00000007273) #7	DPY19L4 (ENSNNAG00000007166) #8	ENSNNAG00000007155	ESRP1 (ENSNNAG00000007129) #9	VIRMA (ENSNNAG00000006749) #10	ENSNNAG00000006659	FSBP (ENSNNAG00000006648)	RAD54B (ENSNNAG00000006592) #11	GEM (ENSNNAG00000006562) #12	CDH17 (ENSNNAG00000006289) #13	PDP1 (ENSNNAG00000006242) #15	TMEM67 (ENSNNAG00000006013) #16	RBM12B (ENSNNAG00000005955) #17	CIBAR1 (ENSNNAG00000005922) #19	TRIQK (ENSNNAG00000005894) #21	RUNX1T1 (ENSNNAG00000005831) #22	SLC26A7 (ENSNNAG00000005706) #23	OTUD6B (ENSNNAG00000005660) #25	PIP4P2 (ENSNNAG00000005646) #26	C8orf88 (ENSNNAG00000005627) #27	ENSNNAG00000005613 #28	ENSNNAG00000005589 #28	TMEM64 (ENSNNAG00000005576) #29	CALB1 (ENSNNAG00000005475) #30	ENSNNAG00000005458	ENSNNAG00000005325 #31	ENSNNAG00000005223 #31	NBN (ENSNNAG00000005134) #32	OSGIN2 (ENSNNAG00000005097) #33	ENSNNAG00000005072	RIPK2 (ENSNNAG00000005030) #34
Lizard	MODERN SPECIES	3	ESRP1 (ENSACAG00000003748) #9	VIRMA (ENSACAG00000003733) #10	ENSACAG00000028900	FSBP (ENSACAG00000003728)	RAD54B (ENSACAG00000003671) #11	GEM (ENSACAG00000003654) #12	CDH17 (ENSACAG00000003553) #13	PDP1 (ENSACAG00000003552) #15	ENSACAG00000038154 #17	TMEM67 (ENSACAG00000003474) #16	ENSACAG00000039738 #17	ENSACAG00000003440 #19	CIBAR1 (ENSACAG00000042477) #19	TRIQK (ENSACAG00000003437) #21	ENSACAG00000043169	RUNX1T1 (ENSACAG00000003354) #22	SLC26A7 (ENSACAG00000003265) #23	ENSACAG00000034614	OTUD6B (ENSACAG00000003212) #25	ENSACAG00000040204	ENSACAG00000012115	ENSACAG00000044838	ENSACAG00000021023	ENSACAG00000042303	ENSACAG00000021137	ENSACAG00000035785	ENSACAG00000044055	ENSACAG00000025099	ENSACAG00000039869	ENSACAG00000037284	ENSACAG00000021146
tuatara	MODERN SPECIES	1541	ENSSPUG00000016407 #8	ENSSPUG00000016423	ESRP1 (ENSSPUG00000016436) #9	VIRMA (ENSSPUG00000016448) #10	ENSSPUG00000016485	RAD54B (ENSSPUG00000016497) #11	FSBP (ENSSPUG00000016511)	GEM (ENSSPUG00000016514) #12	CDH17 (ENSSPUG00000016577) #13	ENSSPUG00000016916 #15	TMEM67 (ENSSPUG00000016925) #16	RBM12B (ENSSPUG00000016954) #17	ENSSPUG00000016965	CIBAR1 (ENSSPUG00000016980) #19	TRIQK (ENSSPUG00000017004) #21	RUNX1T1 (ENSSPUG00000017046) #22
Anura	ANCESTRAL SPECIES	1												ENSGT00940000158322.g.a #17	ENSGT00940000158322.h #17	ENSGT00390000010285.c #19	ENSGT01030000234950	ENSGT00950000183176.b.f #22	ENSGT01100000263544.c.b #23	ENSGT00940000164066 #24	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00940000153331.b	ENSGT00940000164654	ENSGT00940000156113 #34	ENSGT01050000244818	ENSGT00940000157532 #36
Frog	MODERN SPECIES	6	esrp1 (ENSXETG00000014667) #9	cibar1 (ENSXETG00000014666) #19	virma (ENSXETG00000014668) #10	ENSXETG00000015384	FSBP (ENSXETG00000048890)	rad54b (ENSXETG00000025924) #11	gem (ENSXETG00000014678) #12	cdh17 (ENSXETG00000014682) #13	ENSXETG00000039850	pdp1 (ENSXETG00000041992) #15	tmem67 (ENSXETG00000014689) #16	rbm12b.1 (ENSXETG00000025920) #17	rbm12b.2 (ENSXETG00000014696) #17	rbm12b.3 (ENSXETG00000014694) #17	triqk (ENSXETG00000040126)	runx1t1 (ENSXETG00000014592) #22	ENSXETG00000036693	slc26a7 (ENSXETG00000014594) #23	lrrc69 (ENSXETG00000025913)	otud6b (ENSXETG00000014596) #25	c8orf88 (ENSXETG00000014598) #26	necab1 (ENSXETG00000014601) #28	tmem64 (ENSXETG00000014606) #29	calb1 (ENSXETG00000014607) #30	pif1 (ENSXETG00000014609) #31	nbn (ENSXETG00000014611) #32	osgin2 (ENSXETG00000014617) #33	ENSXETG00000014613	XB985134 [provisional:slc7a6] (ENSXETG00000014619)	ENSXETG00000048677	ripk2 (ENSXETG00000030549) #34
Leishan spiny toad	MODERN SPECIES	8	ENSLLEG00000018365	FSBP (ENSLLEG00000018402)	ENSLLEG00000018433	GEM (ENSLLEG00000018481) #12	CDH17 (ENSLLEG00000018731) #13	PDP1 (ENSLLEG00000018980) #15	TMEM67 (ENSLLEG00000019046) #16	ENSLLEG00000019625	ENSLLEG00000019649	ENSLLEG00000019679 #17	ENSLLEG00000019699 #17	CIBAR1 (ENSLLEG00000019742) #19	ENSLLEG00000019953	TRIQK (ENSLLEG00000019984) #21	ENSLLEG00000014576	RUNX1T1 (ENSLLEG00000014666) #22	ENSLLEG00000014992	SLC26A7 (ENSLLEG00000015030) #23	LRRC69 (ENSLLEG00000015212) #24	ENSLLEG00000015602 #25	ENSLLEG00000015746	PIP4P2 (ENSLLEG00000015788) #26	ENSLLEG00000015947	NECAB1 (ENSLLEG00000016057) #28	ENSLLEG00000016264	ENSLLEG00000016311	ENSLLEG00000016335	TMEM64 (ENSLLEG00000016349) #29	CALB1 (ENSLLEG00000016422) #30	DECR1 (ENSLLEG00000016572) #31	ENSLLEG00000016849
Coelacanth	MODERN SPECIES	1147																RUNX1T1 (ENSLACG00000006839) #22
Actinopterygii	ANCESTRAL SPECIES	9			ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b.a	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830.d #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322.j #17	ENSGT00940000158322.i #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00940000157781	ENSGT00950000182991.A.a.c.a.b	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00390000014274	ENSGT00390000015769.A	ENSGT00940000155589	ENSGT00400000022250
Reedfish	MODERN SPECIES	4										ENSECRG00000021313	ENSECRG00000021217	has2 (ENSECRG00000021206)	cibar1 (ENSECRG00000021173) #19	cibar1 (ENSECRG00000021124) #19	triqk (ENSECRG00000021093) #21	runx1t1 (ENSECRG00000021028) #22	ENSECRG00000020979	otud6b (ENSECRG00000020952) #25	pip4p2 (ENSECRG00000020936) #26	necab1 (ENSECRG00000020899) #28	tmem64 (ENSECRG00000020865) #29	upp1 (ENSECRG00000020840)	pnp4b (ENSECRG00000020825)	CALB1 (ENSECRG00000020809) #30	decr1 (ENSECRG00000020768) #31	ENSECRG00000020752	ENSECRG00000020736	FSBP (ENSECRG00000020721)	RAD54B (ENSECRG00000020690) #11	gem (ENSECRG00000020673) #12	cdh17 (ENSECRG00000020580) #13
Neopterygii	ANCESTRAL SPECIES	7	ENSGT00940000164859	ENSGT00390000011137	ENSGT00940000159511 #9	ENSGT00390000002833 #10	ENSGT00530000063647.A.b.a	ENSGT00390000008778	ENSGT00940000156966 #11	ENSGT00940000157830.d #12	ENSGT00940000157655 #13	ENSGT00940000156368.b #15	ENSGT00390000010606 #16	ENSGT00940000158322.j #17	ENSGT00940000158322.i #17	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00940000157781	ENSGT00950000182991.A.a.c.a.b	ENSGT00950000183108.b.a.b #30	ENSGT00940000153801.b #31	ENSGT00390000000521 #32	ENSGT00390000006658.a.b #33	ENSGT00390000014274	ENSGT00390000015769.A	ENSGT00940000155589	ENSGT00400000022250
Osteoglossocephalai	ANCESTRAL SPECIES	74														ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00390000014242.k	ENSGT00390000013934	ENSGT00390000008115	ENSGT00940000153270.a	ENSGT00530000068834	ENSGT00940000153717.a.a	ENSGT00940000165898	ENSGT01030000234597.a.b.b.e.b	ENSGT00940000157068.c	ENSGT00940000157988
Clupeocephala	ANCESTRAL SPECIES	64	ENSGT00940000153446.a.a.w.b	ENSGT00940000154181.b.b	ENSGT00390000013305.a.b	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT00390000004263.a.d.a	ENSGT00940000178526	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00390000014242.k	ENSGT00390000013934	ENSGT00390000008115	ENSGT00940000153270.a	ENSGT00530000068834	ENSGT00940000153717.a.a	ENSGT00940000165898	ENSGT01030000234597.a.b.b.e.b	ENSGT00940000157068.c	ENSGT00940000177780
Euteleosteomorpha	ANCESTRAL SPECIES	12	ENSGT00420000029792.qb.b	ENSGT00390000012138.a.b.d	ENSGT00940000153446.a.a.w.b	ENSGT00940000154181.b.b	ENSGT00390000013305.a.b	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000164066 #24	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00390000014242.k	ENSGT00390000013934	ENSGT00390000008115	ENSGT00940000153270.a	ENSGT00530000068834	ENSGT00940000153717.a.a	ENSGT00940000165898	ENSGT01030000234597.a.b.b.e.b	ENSGT00940000157068.c
Acanthomorphata	ANCESTRAL SPECIES	55		ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Cod	MODERN SPECIES	14	ENSGMOG00000015594	ENSGMOG00000024288	azin1b (ENSGMOG00000015534)	ENSGMOG00000015516	ENSGMOG00000023527	spire1a (ENSGMOG00000015465)	klhl38a (ENSGMOG00000015458)	ENSGMOG00000022404	fam91a1 (ENSGMOG00000004452)	lratd2a (ENSGMOG00000004433)	ENSGMOG00000036896	ENSGMOG00000029694	cibar1 (ENSGMOG00000004412) #19	ENSGMOG00000035498	triqk (ENSGMOG00000031842) #21	runx1t1 (ENSGMOG00000002931) #22	ENSGMOG00000002904	otud6b (ENSGMOG00000002883) #25	ENSGMOG00000002868	ENSGMOG00000002823	ENSGMOG00000022164	ENSGMOG00000003577	ENSGMOG00000003554	ENSGMOG00000003542	ENSGMOG00000003522	ENSGMOG00000032098	ENSGMOG00000032392	RAPGEF5 (ENSGMOG00000006739)	ENSGMOG00000028765	ENSGMOG00000032131	TOMM7 (ENSGMOG00000031331)
Euacanthomorphacea	ANCESTRAL SPECIES		ENSGT00940000170872	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Pinecone sodierfish	MODERN SPECIES	2	ENSMMDG00005003260	ankib1a (ENSMMDG00005003270)	snrpd1 (ENSMMDG00005003280)	ggcta (ENSMMDG00005003289)	adnp2b (ENSMMDG00005003300)	azin1b (ENSMMDG00005003306)	ATP6V1C1 (ENSMMDG00005003318)	ENSMMDG00005003367	spire1a (ENSMMDG00005003386)	klhl38a (ENSMMDG00005003438)	fam91a1 (ENSMMDG00005003443)	lratd2a (ENSMMDG00005003458)	TRIB1 (ENSMMDG00005003459)	cibar1 (ENSMMDG00005003462) #19	triqk (ENSMMDG00005003468) #21	runx1t1 (ENSMMDG00005003488) #22	otud6b (ENSMMDG00005004276) #25	RAB5A (ENSMMDG00005004293)	kat2b (ENSMMDG00005004318)	ENSMMDG00005004330	ZNF385D (ENSMMDG00005004342)	rab25a (ENSMMDG00005004352)	UBQLN4 (ENSMMDG00005004392)	LIM2 (ENSMMDG00005004800)	TINAGL1 (ENSMMDG00005004814)	cfap300 (ENSMMDG00005004822)	KCNQ4 (ENSMMDG00005004827)	nfyc (ENSMMDG00005004862)	ENSMMDG00005005350	RPRD1A (ENSMMDG00005005356)	fkbp9 (ENSMMDG00005005387)
Percomorphaceae	ANCESTRAL SPECIES	10	ENSGT00940000170872	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Tiger tail seahorse	MODERN SPECIES	462	tube1 (ENSHCOG00000013250)	RPRD1A (ENSHCOG00000013245)	ENSHCOG00000013227	nfyc (ENSHCOG00000013215)	KCNQ4 (ENSHCOG00000013175)	TINAGL1 (ENSHCOG00000000380)	UBQLN4 (ENSHCOG00000013142)	rab25a (ENSHCOG00000013095)	ENSHCOG00000013087	kat2b (ENSHCOG00000013077)	spire1a (ENSHCOG00000013060)	fam91a1 (ENSHCOG00000013032)	LRATD2 (ENSHCOG00000012980)	ENSHCOG00000012950	triqk (ENSHCOG00000012940) #21	runx1t1 (ENSHCOG00000012907) #22
Percomorphaceae_B	ANCESTRAL SPECIES	15	ENSGT00940000170872	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000165648	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761
Ovalentaria	ANCESTRAL SPECIES	12	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000165648	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761
Atherinomorphae	ANCESTRAL SPECIES	12	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000165648	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Oryzias	ANCESTRAL SPECIES	22	ENSGT00940000170872	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b	ENSGT00390000016904
Oryzias_a	ANCESTRAL SPECIES	18	ENSGT00940000170872	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT01030000234950	ENSGT00950000183176.b.f #22	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b	ENSGT00390000016904
Chinese medaka	MODERN SPECIES	13	ankib1a (ENSOSIG00000005608)	snrpd1 (ENSOSIG00000005618)	ggcta (ENSOSIG00000005623)	adnp2b (ENSOSIG00000005625)	azin1b (ENSOSIG00000005629)	ATP6V1C1 (ENSOSIG00000005638)	ENSOSIG00000005661	spire1a (ENSOSIG00000005680)	klhl38a (ENSOSIG00000005813)	fam91a1 (ENSOSIG00000005825)	lratd2a (ENSOSIG00000005835)	TRIB1 (ENSOSIG00000005839)	cibar1 (ENSOSIG00000005841) #19	ENSOSIG00000005842	ENSOSIG00000005843	runx1t1 (ENSOSIG00000005853) #22	ENSOSIG00000005978	ENSOSIG00000005981	kat2b (ENSOSIG00000005983)	ENSOSIG00000006010	ENSOSIG00000006012	rab25a (ENSOSIG00000006014)	UBQLN4 (ENSOSIG00000006015)	LIM2 (ENSOSIG00000006016)	TINAGL1 (ENSOSIG00000006018)	cfap300 (ENSOSIG00000006056)	KCNQ4 (ENSOSIG00000006071)	nfyc (ENSOSIG00000006441)	ENSOSIG00000006483	RPRD1A (ENSOSIG00000006488)	dnal1 (ENSOSIG00000006492)
Japanese Medaka HdrR	MODERN SPECIES	2	ankib1a (ENSORLG00000012526)	snrpd1 (ENSORLG00000012516)	ggcta (ENSORLG00000012505)	adnp2b (ENSORLG00000012484)	azin1b (ENSORLG00000012474)	ATP6V1C1 (ENSORLG00000029501)	ENSORLG00000027834	spire1a (ENSORLG00000012450)	klhl38a (ENSORLG00000012386)	fam91a1 (ENSORLG00000012371)	lratd2a (ENSORLG00000012339)	ENSORLG00000012333	cibar1 (ENSORLG00000012324) #19	ENSORLG00000026495	triqk (ENSORLG00000030092) #21	runx1t1 (ENSORLG00000012311) #22	otud6b (ENSORLG00000012290) #25	RAB5A (ENSORLG00000012261)	kat2b (ENSORLG00000012238)	sgo1 (ENSORLG00000012177)	ZNF385D (ENSORLG00000012168)	rab25a (ENSORLG00000012158)	UBQLN4 (ENSORLG00000022806)	ENSORLG00000012119	TINAGL1 (ENSORLG00000012101)	cfap300 (ENSORLG00000012056)	KCNQ4 (ENSORLG00000012041)	nfyc (ENSORLG00000012000)	ENSORLG00000011943	RPRD1A (ENSORLG00000011917)	dnal1 (ENSORLG00000011890)
Oryzias_b	ANCESTRAL SPECIES	22	ENSGT00940000170872	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b	ENSGT00390000016904
Indian medaka	MODERN SPECIES	3	fam83hb (ENSOMEG00000000980)	ENSOMEG00000011640	ankib1a (ENSOMEG00000011610)	snrpd1 (ENSOMEG00000011571)	adnp2b (ENSOMEG00000011557)	ggcta (ENSOMEG00000011550)	azin1b (ENSOMEG00000011535)	ATP6V1C1 (ENSOMEG00000011507)	spire1a (ENSOMEG00000011380)	klhl38a (ENSOMEG00000011069)	fam91a1 (ENSOMEG00000011027)	lratd2a (ENSOMEG00000010918)	TRIB1 (ENSOMEG00000010903)	cibar1 (ENSOMEG00000010893) #19	triqk (ENSOMEG00000010883) #21	runx1t1 (ENSOMEG00000010840) #22	otud6b (ENSOMEG00000010735) #25	RAB5A (ENSOMEG00000010692)	kat2b (ENSOMEG00000010646)	ENSOMEG00000010604	ZNF385D (ENSOMEG00000010535)	rab25a (ENSOMEG00000010510)	UBQLN4 (ENSOMEG00000010492)	lim2.4 (ENSOMEG00000010467)	TINAGL1 (ENSOMEG00000010435)	cfap300 (ENSOMEG00000010381)	KCNQ4 (ENSOMEG00000010348)	nfyc (ENSOMEG00000010270)	ENSOMEG00000010192	RPRD1A (ENSOMEG00000010157)	ENSOMEG00000010121
Javanese ricefish	MODERN SPECIES	2	ankib1a (ENSOJAG00000010739)	snrpd1 (ENSOJAG00000011034)	ggcta (ENSOJAG00000011078)	adnp2b (ENSOJAG00000011194)	azin1b (ENSOJAG00000011210)	ATP6V1C1 (ENSOJAG00000011218)	ENSOJAG00000011330	spire1a (ENSOJAG00000011357)	klhl38a (ENSOJAG00000011481)	fam91a1 (ENSOJAG00000011512)	lratd2a (ENSOJAG00000011622)	TRIB1 (ENSOJAG00000011629)	cibar1 (ENSOJAG00000011640) #19	triqk (ENSOJAG00000011659) #21	ENSOJAG00000011664	runx1t1 (ENSOJAG00000011709) #22	otud6b (ENSOJAG00000011997) #25	ENSOJAG00000012005	kat2b (ENSOJAG00000012098)	ENSOJAG00000012666	ENSOJAG00000012684	rab25a (ENSOJAG00000012701)	UBQLN4 (ENSOJAG00000012728)	LIM2 (ENSOJAG00000012774)	TINAGL1 (ENSOJAG00000012826)	cfap300 (ENSOJAG00000012913)	KCNQ4 (ENSOJAG00000012989)	nfyc (ENSOJAG00000013876)	ENSOJAG00000014033	RPRD1A (ENSOJAG00000014045)	dnal1 (ENSOJAG00000014068)
Cyprinodontiformes	ANCESTRAL SPECIES	10	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000165648	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Aplocheiloidei	ANCESTRAL SPECIES	9	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00390000012840 #25	ENSGT00940000166759	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Mangrove rivulus	MODERN SPECIES	2	ankib1a (ENSKMAG00000006009)	snrpd1 (ENSKMAG00000005987)	ggcta (ENSKMAG00000005949)	adnp2b (ENSKMAG00000005923)	azin1b (ENSKMAG00000005902)	ATP6V1C1 (ENSKMAG00000005843)	ENSKMAG00000005812	DNAH8 (ENSKMAG00000005636)	spire1a (ENSKMAG00000005513)	klhl38a (ENSKMAG00000005470)	fam91a1 (ENSKMAG00000005370)	lratd2a (ENSKMAG00000005326)	TRIB1 (ENSKMAG00000005319)	cibar1 (ENSKMAG00000005279) #19	triqk (ENSKMAG00000005257) #21	runx1t1 (ENSKMAG00000005217) #22	ENSKMAG00000005189	ENSKMAG00000005172	ENSKMAG00000005159	ENSKMAG00000005130	RAB5A (ENSKMAG00000005111)	kat2b (ENSKMAG00000005023)	ENSKMAG00000004974	ZNF385D (ENSKMAG00000004957)	rab25a (ENSKMAG00000004945)	UBQLN4 (ENSKMAG00000004904)	LIM2 (ENSKMAG00000004882)	TINAGL1 (ENSKMAG00000004823)	cfap300 (ENSKMAG00000004758)	KCNQ4 (ENSKMAG00000004704)	nfyc (ENSKMAG00000004636)
Turquoise killifish	MODERN SPECIES	1628	MTERFD1 (ENSNFUG00015017337)	UQCRB (ENSNFUG00015017341)	lrrc14b (ENSNFUG00015017343)	GATAD1 (ENSNFUG00015017344)	CHRAC1 (ENSNFUG00015017353)	TMEM55A (ENSNFUG00015017363) #26	FAM83H (ENSNFUG00015017368)	ENSNFUG00015017376	GRINA (ENSNFUG00015017387)	mapk15 (ENSNFUG00015017393)	VPS28 (ENSNFUG00015017422)	ENSNFUG00015017450	CAP2 (ENSNFUG00015017505)	RBM24A (ENSNFUG00015018351)	TRIQK (ENSNFUG00015018355) #21	runx1t1 (ENSNFUG00015018373) #22	OTUD6B (ENSNFUG00015018725) #25	RAB5AA (ENSNFUG00015018732)	kat2b (ENSNFUG00015018758)	ENSNFUG00015019192	ZNF385D (ENSNFUG00015019197)	rab25a (ENSNFUG00015019204)	UBQLN4 (ENSNFUG00015019223)	LIM2 (ENSNFUG00015019294)	TINAGL1 (ENSNFUG00015019296)	ncaph (ENSNFUG00015019332)	vamp8 (ENSNFUG00015019343)	cfap300 (ENSNFUG00015019344)	KCNQ4 (ENSNFUG00015019359)	NFYC (ENSNFUG00015020051)	ENSNFUG00015020066
Cyprinodontoidei	ANCESTRAL SPECIES	11	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164558.k	ENSGT01030000234601.n.a.a.b.b	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000165648	ENSGT00940000159209	ENSGT00940000155689
Poeciliinae	ANCESTRAL SPECIES	18	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164558.k	ENSGT01030000234601.n.a.a.b.b	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000165648	ENSGT00940000159209	ENSGT00940000155689
Poecilia	ANCESTRAL SPECIES	24	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01030000234601.n.a.a.b.b	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000165648	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761
NAME_6	ANCESTRAL SPECIES	21	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT01030000234601.n.a.a.b.b	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000165648	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761
Sailfin molly	MODERN SPECIES	1289														cibar1 (ENSPLAG00000017741) #19	triqk (ENSPLAG00000017752) #21	runx1t1 (ENSPLAG00000017772) #22	ENSPLAG00000000411	ENSPLAG00000017807	otud6b (ENSPLAG00000017821) #25	RAB5A (ENSPLAG00000017838)	kat2b (ENSPLAG00000017894)	ENSPLAG00000017902	ZNF385D (ENSPLAG00000017915)
Amazon molly	MODERN SPECIES	273	ENSPFOG00000012722	ankib1a (ENSPFOG00000012480)	snrpd1 (ENSPFOG00000012448)	ggcta (ENSPFOG00000012444)	adnp2b (ENSPFOG00000012428)	azin1b (ENSPFOG00000012296)	ATP6V1C1 (ENSPFOG00000012231)	spire1a (ENSPFOG00000012063)	klhl38a (ENSPFOG00000012049)	fam91a1 (ENSPFOG00000011838)	lratd2a (ENSPFOG00000020066)	lratd2a (ENSPFOG00000020065)	TRIB1 (ENSPFOG00000011808)	cibar1 (ENSPFOG00000011718) #19	triqk (ENSPFOG00000011703) #21	runx1t1 (ENSPFOG00000011423) #22	ENSPFOG00000011364	ENSPFOG00000011360	otud6b (ENSPFOG00000011303) #25	RAB5A (ENSPFOG00000011263)	kat2b (ENSPFOG00000010842)	ENSPFOG00000010790	ZNF385D (ENSPFOG00000010672)	rab25a (ENSPFOG00000010632)	UBQLN4 (ENSPFOG00000010520)	LIM2 (ENSPFOG00000010498)	TINAGL1 (ENSPFOG00000024014)	cfap300 (ENSPFOG00000010433)	KCNQ4 (ENSPFOG00000009977)	nfyc (ENSPFOG00000009785)	ENSPFOG00000009758
Guppy	MODERN SPECIES	441	ENSPREG00000007212	ankib1a (ENSPREG00000007115)	snrpd1 (ENSPREG00000007094)	ggcta (ENSPREG00000007067)	adnp2b (ENSPREG00000007061)	azin1b (ENSPREG00000007004)	ATP6V1C1 (ENSPREG00000006953)	ENSPREG00000006936	spire1a (ENSPREG00000006919)	klhl38a (ENSPREG00000006908)	fam91a1 (ENSPREG00000006792)	lratd2a (ENSPREG00000006753)	TRIB1 (ENSPREG00000006742)	cibar1 (ENSPREG00000006693) #19	ENSPREG00000006676	runx1t1 (ENSPREG00000006632) #22	ENSPREG00000006614	ENSPREG00000006593	otud6b (ENSPREG00000006541) #25	ENSPREG00000006527	kat2b (ENSPREG00000006463)	ENSPREG00000006434	ENSPREG00000006413	rab25a (ENSPREG00000006119)	UBQLN4 (ENSPREG00000006021)	LIM2 (ENSPREG00000006002)	TINAGL1 (ENSPREG00000005972)	cfap300 (ENSPREG00000005910)	KCNQ4 (ENSPREG00000005859)	nfyc (ENSPREG00000005805)	ENSPREG00000005783
Platyfish	MODERN SPECIES	4	ankib1a (ENSXMAG00000003372)	snrpd1 (ENSXMAG00000003368)	ggcta (ENSXMAG00000003367)	adnp2b (ENSXMAG00000029882)	azin1b (ENSXMAG00000003359)	ATP6V1C1 (ENSXMAG00000003348)	ENSXMAG00000026096	spire1a (ENSXMAG00000003339)	klhl38a (ENSXMAG00000003337)	fam91a1 (ENSXMAG00000003318)	lratd2a (ENSXMAG00000020332)	TRIB1 (ENSXMAG00000003315)	ENSXMAG00000023013	cibar1 (ENSXMAG00000003312) #19	triqk (ENSXMAG00000027609) #21	runx1t1 (ENSXMAG00000029124) #22	ENSXMAG00000003286	otud6b (ENSXMAG00000003276) #25	RAB5A (ENSXMAG00000028889)	kat2b (ENSXMAG00000003253)	ENSXMAG00000003247	ZNF385D (ENSXMAG00000026238)	rab25a (ENSXMAG00000003233)	UBQLN4 (ENSXMAG00000003208)	LIM2 (ENSXMAG00000003204)	TINAGL1 (ENSXMAG00000003194)	cfap300 (ENSXMAG00000007924)	KCNQ4 (ENSXMAG00000003184)	nfyc (ENSXMAG00000003179)	ENSXMAG00000003178	RPRD1A (ENSXMAG00000003172)
NAME_4	ANCESTRAL SPECIES	10	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164558.k	ENSGT01030000234601.n.a.a.b.b.f	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761
Mummichog	MODERN SPECIES	2253	ankib1a (ENSFHEG00000013602)	snrpd1 (ENSFHEG00000000642)	ggcta (ENSFHEG00000013631)	adnp2b (ENSFHEG00000013651)	azin1b (ENSFHEG00000013661)	ATP6V1C1 (ENSFHEG00000013699)	ENSFHEG00000013717	spire1a (ENSFHEG00000013757)	klhl38a (ENSFHEG00000013770)	fam91a1 (ENSFHEG00000013823)	lratd2a (ENSFHEG00000013840)	TRIB1 (ENSFHEG00000013845)	cibar1 (ENSFHEG00000013881) #19	triqk (ENSFHEG00000013899) #21	ENSFHEG00000013908 ##22	runx1t1 (ENSFHEG00000013941) #22	ENSFHEG00000013950	ENSFHEG00000013970	otud6b (ENSFHEG00000014034) #25	ENSFHEG00000014070	kat2b (ENSFHEG00000014137)	ENSFHEG00000014149	ENSFHEG00000014162	rab25a (ENSFHEG00000014186)	UBQLN4 (ENSFHEG00000014233)	LIM2 (ENSFHEG00000014247)	TINAGL1 (ENSFHEG00000014281)	cfap300 (ENSFHEG00000014297)	KCNQ4 (ENSFHEG00000000825)	nfyc (ENSFHEG00000014493)	RPRD1A (ENSFHEG00000014516)
Sheepshead minnow	MODERN SPECIES	1121															triqk (ENSCVAG00000007376) #21	runx1t1 (ENSCVAG00000007372) #22	ENSCVAG00000007345
Ovalentaria_B	ANCESTRAL SPECIES	15	ENSGT00940000170872	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Pomacentridae	ANCESTRAL SPECIES	7	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Pomacentridae_A	ANCESTRAL SPECIES	6	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00980000199767	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761
Amphiprion	ANCESTRAL SPECIES	16	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00980000199767	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761
Clown anemonefish	MODERN SPECIES	3548	fam83hb (ENSAOCG00000007284)	ENSAOCG00000007291	ankib1a (ENSAOCG00000007385)	snrpd1 (ENSAOCG00000007406)	ggcta (ENSAOCG00000007520)	adnp2b (ENSAOCG00000007562)	azin1b (ENSAOCG00000000415)	ATP6V1C1 (ENSAOCG00000007622)	spire1a (ENSAOCG00000007762)	klhl38a (ENSAOCG00000007796)	fam91a1 (ENSAOCG00000007865)	lratd2a (ENSAOCG00000000446)	TRIB1 (ENSAOCG00000007899)	cibar1 (ENSAOCG00000007915) #19	ENSAOCG00000007926	runx1t1 (ENSAOCG00000007976) #22
Orange clownfish	MODERN SPECIES	8	ENSAPEG00000012406	ankib1a (ENSAPEG00000012428)	snrpd1 (ENSAPEG00000012539)	ggcta (ENSAPEG00000012577)	adnp2b (ENSAPEG00000012768)	azin1b (ENSAPEG00000012782)	ATP6V1C1 (ENSAPEG00000012792)	ENSAPEG00000012837	spire1a (ENSAPEG00000012862)	klhl38a (ENSAPEG00000012991)	fam91a1 (ENSAPEG00000013030)	lratd2a (ENSAPEG00000013116)	TRIB1 (ENSAPEG00000013133)	cibar1 (ENSAPEG00000013141) #19	triqk (ENSAPEG00000013161) #21	runx1t1 (ENSAPEG00000013263) #22	ENSAPEG00000013297	otud6b (ENSAPEG00000013341) #25	RAB5A (ENSAPEG00000013376)	kat2b (ENSAPEG00000013389)	ENSAPEG00000013460	ZNF385D (ENSAPEG00000013490)	rab25a (ENSAPEG00000013500)	UBQLN4 (ENSAPEG00000013530)	LIM2 (ENSAPEG00000013579)	TINAGL1 (ENSAPEG00000013606)	cfap300 (ENSAPEG00000013640)	KCNQ4 (ENSAPEG00000013703)	nfyc (ENSAPEG00000013755)	ENSAPEG00000013806	RPRD1A (ENSAPEG00000013832)
Spiny chromis	MODERN SPECIES	306	ENSAPOG00000019363	ankib1a (ENSAPOG00000019422)	snrpd1 (ENSAPOG00000019446)	ggcta (ENSAPOG00000000542)	adnp2b (ENSAPOG00000000547)	azin1b (ENSAPOG00000019513)	ATP6V1C1 (ENSAPOG00000019558)	ENSAPOG00000019575	spire1a (ENSAPOG00000019705)	klhl38a (ENSAPOG00000019745)	fam91a1 (ENSAPOG00000019873)	lratd2a (ENSAPOG00000019900)	TRIB1 (ENSAPOG00000019910)	cibar1 (ENSAPOG00000019951) #19	ENSAPOG00000019976	runx1t1 (ENSAPOG00000019997) #22
Bicolor damselfish	MODERN SPECIES	282	ENSSPAG00000015192	ankib1a (ENSSPAG00000015197)	snrpd1 (ENSSPAG00000015229)	ggcta (ENSSPAG00000015240)	adnp2b (ENSSPAG00000015259)	azin1b (ENSSPAG00000015272)	ATP6V1C1 (ENSSPAG00000015295)	ENSSPAG00000015328	spire1a (ENSSPAG00000015345)	klhl38a (ENSSPAG00000015388)	fam91a1 (ENSSPAG00000015408)	lratd2a (ENSSPAG00000015483)	TRIB1 (ENSSPAG00000015496)	cibar1 (ENSSPAG00000015509) #19	triqk (ENSSPAG00000015599) #21	runx1t1 (ENSSPAG00000015609) #22	ENSSPAG00000015641	otud6b (ENSSPAG00000015659) #25	RAB5A (ENSSPAG00000015678)	kat2b (ENSSPAG00000015695)	ENSSPAG00000015783	ZNF385D (ENSSPAG00000015801)	rab25a (ENSSPAG00000015817)	UBQLN4 (ENSSPAG00000015830)	LIM2 (ENSSPAG00000015867)	TINAGL1 (ENSSPAG00000015885)	cfap300 (ENSSPAG00000015942)
Cichlidae	ANCESTRAL SPECIES	7	ENSGT00940000164175.b.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b	ENSGT00940000157125
Pseudocrenilabrinae	ANCESTRAL SPECIES	12	ENSGT00940000164175.b.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b	ENSGT00940000157125
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	9	ENSGT00940000164175.b.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b	ENSGT00940000157125
Lyretail cichlid	MODERN SPECIES	302	ENSNBRG00000012136	ENSNBRG00000012132	snrpd1 (ENSNBRG00000012119)	ggcta (ENSNBRG00000012105)	adnp2b (ENSNBRG00000012098)	azin1b (ENSNBRG00000012071)	ATP6V1C1 (ENSNBRG00000012031)	ENSNBRG00000012012	spire1a (ENSNBRG00000011963)	klhl38a (ENSNBRG00000011948)	fam91a1 (ENSNBRG00000011886)	lratd2a (ENSNBRG00000011869)	TRIB1 (ENSNBRG00000011861)	cibar1 (ENSNBRG00000011840) #19	triqk (ENSNBRG00000011829) #21	runx1t1 (ENSNBRG00000011794) #22	otud6b (ENSNBRG00000011773) #25	RAB5A (ENSNBRG00000011763)	kat2b (ENSNBRG00000011694)	ENSNBRG00000011645	ZNF385D (ENSNBRG00000011627)	rab25a (ENSNBRG00000011607)	UBQLN4 (ENSNBRG00000011567)	lim2.4 (ENSNBRG00000011542)	TINAGL1 (ENSNBRG00000011501)	ENSNBRG00000011490	cfap300 (ENSNBRG00000011441)	KCNQ4 (ENSNBRG00000011392)	nfyc (ENSNBRG00000011317)	ENSNBRG00000011302	RPRD1A (ENSNBRG00000011271)
Haplochromini	ANCESTRAL SPECIES	5	ENSGT00940000164175.b.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b	ENSGT00940000157125
Burton s mouthbrooder	MODERN SPECIES	288	ENSHBUG00000003187	ankib1a (ENSHBUG00000003207)	snrpd1 (ENSHBUG00000003236)	ggcta (ENSHBUG00000003291)	adnp2b (ENSHBUG00000003303)	azin1b (ENSHBUG00000003342)	ATP6V1C1 (ENSHBUG00000003393)	ENSHBUG00000003413	spire1a (ENSHBUG00000003464)	klhl38a (ENSHBUG00000003495)	fam91a1 (ENSHBUG00000003560)	lratd2a (ENSHBUG00000003578)	TRIB1 (ENSHBUG00000003590)	cibar1 (ENSHBUG00000003662) #19	triqk (ENSHBUG00000003679) #21	runx1t1 (ENSHBUG00000003721) #22	otud6b (ENSHBUG00000003747) #25	RAB5A (ENSHBUG00000003752)	kat2b (ENSHBUG00000003802)	ENSHBUG00000003842	ZNF385D (ENSHBUG00000003857)	rab25a (ENSHBUG00000003876)	UBQLN4 (ENSHBUG00000003919)	lim2.4 (ENSHBUG00000003933)	TINAGL1 (ENSHBUG00000003993)	cfap300 (ENSHBUG00000004068)	KCNQ4 (ENSHBUG00000004142)	nfyc (ENSHBUG00000004235)	ENSHBUG00000004268	RPRD1A (ENSHBUG00000004298)
Haplochromini_A	ANCESTRAL SPECIES	5	ENSGT00940000164175.b.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b	ENSGT00940000157125
P. nyererei	MODERN SPECIES	323	ENSPNYG00000010959	ENSPNYG00000010950	snrpd1 (ENSPNYG00000010941)	ggcta (ENSPNYG00000010921)	adnp2b (ENSPNYG00000010918)	azin1b (ENSPNYG00000010912)	ATP6V1C1 (ENSPNYG00000010871)	ENSPNYG00000010856	spire1a (ENSPNYG00000010820)	klhl38a (ENSPNYG00000010808)	fam91a1 (ENSPNYG00000010766)	lratd2a (ENSPNYG00000010751)	TRIB1 (ENSPNYG00000010744)	cibar1 (ENSPNYG00000010722) #19	triqk (ENSPNYG00000010706) #21	runx1t1 (ENSPNYG00000010652) #22	otud6b (ENSPNYG00000010630) #25	ENSPNYG00000010612	kat2b (ENSPNYG00000010541)	ENSPNYG00000010506	rab25a (ENSPNYG00000010491)	UBQLN4 (ENSPNYG00000010469)	lim2.4 (ENSPNYG00000010457)	TINAGL1 (ENSPNYG00000010424)	cfap300 (ENSPNYG00000010375)	KCNQ4 (ENSPNYG00000010332)	nfyc (ENSPNYG00000010254)	RPRD1A (ENSPNYG00000010221)	fkbp9 (ENSPNYG00000010146)	crtap (ENSPNYG00000010124)	ENSPNYG00000010102
Haplochromini_B	ANCESTRAL SPECIES	1	ENSGT00940000164175.b.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b	ENSGT00940000157125
Eastern happy	MODERN SPECIES	13	ENSACLG00000017138	ankib1a (ENSACLG00000017157)	snrpd1 (ENSACLG00000017406)	ggcta (ENSACLG00000017417)	adnp2b (ENSACLG00000017453)	azin1b (ENSACLG00000017457)	ATP6V1C1 (ENSACLG00000017479)	ENSACLG00000017527	spire1a (ENSACLG00000017550)	klhl38a (ENSACLG00000017725)	fam91a1 (ENSACLG00000017738)	lratd2a (ENSACLG00000017847)	TRIB1 (ENSACLG00000017865)	cibar1 (ENSACLG00000017875) #19	triqk (ENSACLG00000017940) #21	runx1t1 (ENSACLG00000017970) #22	ENSACLG00000018022	otud6b (ENSACLG00000018028) #25	RAB5A (ENSACLG00000018066)	kat2b (ENSACLG00000018091)	ENSACLG00000018207	ZNF385D (ENSACLG00000018233)	rab25a (ENSACLG00000018262)	UBQLN4 (ENSACLG00000018287)	lim2.4 (ENSACLG00000018324)	TINAGL1 (ENSACLG00000018345)	cfap300 (ENSACLG00000018413)	KCNQ4 (ENSACLG00000018427)	nfyc (ENSACLG00000018486)	ENSACLG00000018542	RPRD1A (ENSACLG00000018571)
Zebra mbuna	MODERN SPECIES	1104	ENSMZEG00005004618	ankib1a (ENSMZEG00005004634)	snrpd1 (ENSMZEG00005004685)	ggcta (ENSMZEG00005004731)	adnp2b (ENSMZEG00005004852)	azin1b (ENSMZEG00005004859)	ATP6V1C1 (ENSMZEG00005004864)	ENSMZEG00005004890	spire1a (ENSMZEG00005004933)	klhl38a (ENSMZEG00005005032)	fam91a1 (ENSMZEG00005005037)	lratd2a (ENSMZEG00005005078)	TRIB1 (ENSMZEG00005005082)	cibar1 (ENSMZEG00005005095) #19	triqk (ENSMZEG00005005113) #21	runx1t1 (ENSMZEG00005005142) #22	otud6b (ENSMZEG00005005182) #25	RAB5A (ENSMZEG00005005205)	kat2b (ENSMZEG00005005213)	ENSMZEG00005005278	ZNF385D (ENSMZEG00005005294)	rab25a (ENSMZEG00005005311)	UBQLN4 (ENSMZEG00005005334)	lim2.4 (ENSMZEG00005005355)	TINAGL1 (ENSMZEG00005005377)	cfap300 (ENSMZEG00005005410)	KCNQ4 (ENSMZEG00005005425)	nfyc (ENSMZEG00005005451)	ENSMZEG00005005503	RPRD1A (ENSMZEG00005005518)	ENSMZEG00005005529
Nile tilapia	MODERN SPECIES	13	ankib1a (ENSONIG00000002487)	snrpd1 (ENSONIG00000038390)	ggcta (ENSONIG00000039501)	adnp2b (ENSONIG00000035194)	azin1b (ENSONIG00000002480)	ATP6V1C1 (ENSONIG00000002471)	ENSONIG00000028609	spire1a (ENSONIG00000002465)	klhl38a (ENSONIG00000002463)	fam91a1 (ENSONIG00000002456)	ENSONIG00000033671	lratd2a (ENSONIG00000020847)	TRIB1 (ENSONIG00000033303)	cibar1 (ENSONIG00000002446) #19	triqk (ENSONIG00000038292) #21	runx1t1 (ENSONIG00000002435) #22	otud6b (ENSONIG00000002430) #25	kat2b (ENSONIG00000002420)	ENSONIG00000002417	ENSONIG00000002414	rab25a (ENSONIG00000027893)	UBQLN4 (ENSONIG00000002403)	LIM2 (ENSONIG00000016373)	TINAGL1 (ENSONIG00000002394)	cfap300 (ENSONIG00000002387)	KCNQ4 (ENSONIG00000002385)	nfyc (ENSONIG00000002373)	ENSONIG00000040100	RPRD1A (ENSONIG00000002368)	fkbp9 (ENSONIG00000002364)	crtap (ENSONIG00000002363)
Midas cichlid	MODERN SPECIES	1257															triqk (ENSACIG00000019162) #21	runx1t1 (ENSACIG00000019175) #22	otud6b (ENSACIG00000019192) #25	RAB5A (ENSACIG00000019251)	kat2b (ENSACIG00000019715)	ENSACIG00000019765	ZNF385D (ENSACIG00000019786)	rab25a (ENSACIG00000019803)	UBQLN4 (ENSACIG00000019826)	LIM2 (ENSACIG00000019855)	TINAGL1 (ENSACIG00000019865)	cfap300 (ENSACIG00000019886)	KCNQ4 (ENSACIG00000019926)	nfyc (ENSACIG00000019950)	RPRD1A (ENSACIG00000019980)	fkbp9 (ENSACIG00000019991)	crtap (ENSACIG00000020022)
Percomorphaceae_C	ANCESTRAL SPECIES	15	ENSGT00940000170872	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000165648	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761
Eupercaria	ANCESTRAL SPECIES	11	ENSGT00940000170872	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000165648	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761
Tetraodontidae	ANCESTRAL SPECIES	20	ENSGT00390000017955.d	ENSGT00940000156245.a.b	ENSGT00940000153253.a	ENSGT00530000063576.B.a.b	ENSGT00390000005801	ENSGT00390000012916	ENSGT01030000234531.C	ENSGT00950000183051.a.a.a	ENSGT00940000155549.a.a.b	ENSGT00940000157893	ENSGT00530000063461.A.b	ENSGT00550000074698	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT01030000234950	ENSGT00950000183176.b.f #22	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158387	ENSGT00940000159332	ENSGT00390000000118	ENSGT00940000155880.f	ENSGT00940000155957.b	ENSGT00940000156906.j.b	ENSGT00940000155261.b	ENSGT00390000003635.g	ENSGT00950000183025.b.a.ab	ENSGT00940000165581
Fugu	MODERN SPECIES	3	nup153 (ENSTRUG00000010163)	PTDSS1 (ENSTRUG00000010448)	mterf3 (ENSTRUG00000010597)	uqcrb (ENSTRUG00000010634)	lrrc14b (ENSTRUG00000010672)	ENSTRUG00000032760	tshz1 (ENSTRUG00000010712)	ENSTRUG00000024953	trps1 (ENSTRUG00000021680)	clptm1l (ENSTRUG00000005291)	rplp1 (ENSTRUG00000005235)	TRIB1 (ENSTRUG00000028474)	cibar1 (ENSTRUG00000001486) #19	ENSTRUG00000029066	ENSTRUG00000030954	runx1t1 (ENSTRUG00000001804) #22	otud6b (ENSTRUG00000018086) #25	RAB5A (ENSTRUG00000032332)	kat2b (ENSTRUG00000018099)	ENSTRUG00000018124	ZNF385D (ENSTRUG00000018125)	smap2 (ENSTRUG00000018144)	rims3 (ENSTRUG00000018155)	nup42 (ENSTRUG00000023049)	ENSTRUG00000020598	osbpl3a (ENSTRUG00000018171)	ENSTRUG00000018191	ENSTRUG00000027270	ENSTRUG00000031997	Jazf1a (ENSTRUG00000028050)	tax1bp1a (ENSTRUG00000027936)
Tetraodon	MODERN SPECIES	15	cap2 (ENSTNIG00000009180)	rbm24a (ENSTNIG00000009181)	nup153 (ENSTNIG00000009182)	PTDSS1 (ENSTNIG00000009183)	mterf3 (ENSTNIG00000009184)	uqcrb (ENSTNIG00000009185)	lrrc14b (ENSTNIG00000009186)	tshz1 (ENSTNIG00000001441)	CSMD3 (ENSTNIG00000009187)	ENSTNIG00000009188	ENSTNIG00000009189	clptm1l (ENSTNIG00000009190)	rplp1 (ENSTNIG00000009191)	TRIB1 (ENSTNIG00000009192)	cibar1 (ENSTNIG00000009193) #19	runx1t1 (ENSTNIG00000009194) #22	otud6b (ENSTNIG00000009195) #25	RAB5A (ENSTNIG00000009196)	kat2b (ENSTNIG00000009197)	ENSTNIG00000009198	ZNF385D (ENSTNIG00000009199)	smap2 (ENSTNIG00000009200)	rims3 (ENSTNIG00000009201)	nup42 (ENSTNIG00000001691)	ENSTNIG00000000830	osbpl3a (ENSTNIG00000009202)	ENSTNIG00000000262	ENSTNIG00000009203	jazf1a (ENSTNIG00000009204)	tax1bp1a (ENSTNIG00000009205)	hibadha (ENSTNIG00000009206)
Eupecaria_A	ANCESTRAL SPECIES	12	ENSGT00940000170872	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Eupecaria_B	ANCESTRAL SPECIES	12	ENSGT00940000170872	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Eupecaria_C	ANCESTRAL SPECIES	13	ENSGT00940000170872	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	10	ENSGT00940000170872	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
European seabass	MODERN SPECIES	22	ENSDLAG00005019173	ENSDLAG00005019071	ENSDLAG00005032829	ENSDLAG00005019038	ENSDLAG00005019031	azin1b (ENSDLAG00005019015)	ENSDLAG00005018964	ENSDLAG00005018958	spire1a (ENSDLAG00005018793)	klhl38a (ENSDLAG00005018787)	fam91a1 (ENSDLAG00005016720)	lratd2a (ENSDLAG00005032677)	ENSDLAG00005034184	cibar1 (ENSDLAG00005018773) #19	triqk (ENSDLAG00005016668) #21	runx1t1 (ENSDLAG00005016462) #22	ENSDLAG00005016437	otud6b (ENSDLAG00005016415) #25	RAB5A (ENSDLAG00005031711)	KAT2B (ENSDLAG00005015891)	ENSDLAG00005015862	ZNF385D (ENSDLAG00005015849)	ENSDLAG00005015739	ENSDLAG00005015815	ENSDLAG00005015687	ENSDLAG00005015683	ENSDLAG00005015234	ENSDLAG00005015069	ENSDLAG00005033520	fkbp9 (ENSDLAG00005014859)	crtap (ENSDLAG00005030248)
Large yellow croaker	MODERN SPECIES	484	ENSLCRG00005018804	ankib1a (ENSLCRG00005018761)	snrpd1 (ENSLCRG00005018742)	ggcta (ENSLCRG00005018739)	adnp2b (ENSLCRG00005018738)	azin1b (ENSLCRG00005018735)	ATP6V1C1 (ENSLCRG00005018705)	ENSLCRG00005018694	spire1a (ENSLCRG00005018432)	klhl38a (ENSLCRG00005018391)	fam91a1 (ENSLCRG00005018352)	lratd2a (ENSLCRG00005018326)	TRIB1 (ENSLCRG00005018322)	cibar1 (ENSLCRG00005018310) #19	ENSLCRG00005018296	runx1t1 (ENSLCRG00005017684) #22	ENSLCRG00005017619	otud6b (ENSLCRG00005017614) #25	RAB5A (ENSLCRG00005017604)	kat2b (ENSLCRG00005016958)	ENSLCRG00005016859	ZNF385D (ENSLCRG00005016858)	rab25a (ENSLCRG00005016847)	UBQLN4 (ENSLCRG00005016844)	LIM2 (ENSLCRG00005016837)	TINAGL1 (ENSLCRG00005016804)	cfap300 (ENSLCRG00005016793)	KCNQ4 (ENSLCRG00005016017)	nfyc (ENSLCRG00005015798)	ENSLCRG00005015764	ENSLCRG00005015755
Gilthead seabream	MODERN SPECIES	17	ENSSAUG00010005926	ankib1a (ENSSAUG00010005930)	snrpd1 (ENSSAUG00010005947)	ggcta (ENSSAUG00010005948)	adnp2b (ENSSAUG00010005950)	azin1b (ENSSAUG00010005954)	ATP6V1C1 (ENSSAUG00010005959)	ENSSAUG00010005974	spire1a (ENSSAUG00010005981)	klhl38a (ENSSAUG00010006457)	fam91a1 (ENSSAUG00010006512)	lratd2a (ENSSAUG00010008954)	TRIB1 (ENSSAUG00010008959)	cibar1 (ENSSAUG00010008960) #19	ENSSAUG00010008961	runx1t1 (ENSSAUG00010008971) #22	ENSSAUG00010009037	otud6b (ENSSAUG00010009048) #25	RAB5A (ENSSAUG00010009052)	kat2b (ENSSAUG00010009062)	ENSSAUG00010009067	ZNF385D (ENSSAUG00010009072)	rab25a (ENSSAUG00010009077)	UBQLN4 (ENSSAUG00010009085)	LIM2 (ENSSAUG00010009090)	tinagl1 (ENSSAUG00010009103)	cfap300 (ENSSAUG00010009123)	KCNQ4 (ENSSAUG00010009139)	nfyc (ENSSAUG00010009601)	ENSSAUG00010009647	RPRD1A (ENSSAUG00010000139)
Perciformes	ANCESTRAL SPECIES	11	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000161019	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Perciformes_a	ANCESTRAL SPECIES	14	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT01030000234950	ENSGT00950000183176.b.f #22	ENSGT00940000161019	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Channel bull blenny	MODERN SPECIES	2	ENSCGOG00000004071	ankib1a (ENSCGOG00000023945)	snrpd1 (ENSCGOG00000023934)	ggcta (ENSCGOG00000023933)	adnp2b (ENSCGOG00000023932)	azin1b (ENSCGOG00000023931)	ATP6V1C1 (ENSCGOG00000023860)	ENSCGOG00000023849	spire1a (ENSCGOG00000023833)	klhl38a (ENSCGOG00000023822)	fam91a1 (ENSCGOG00000023633)	lratd2a (ENSCGOG00000023615)	TRIB1 (ENSCGOG00000023614)	cibar1 (ENSCGOG00000023610) #19	ENSCGOG00000023604	runx1t1 (ENSCGOG00000023558) #22	ENSCGOG00000023553	otud6b (ENSCGOG00000023552) #25	RAB5A (ENSCGOG00000023540)	kat2b (ENSCGOG00000023382)	ENSCGOG00000023369	ZNF385D (ENSCGOG00000023368)	rab25a (ENSCGOG00000023367)	UBQLN4 (ENSCGOG00000023348)	LIM2 (ENSCGOG00000023346)	TINAGL1 (ENSCGOG00000023343)	cfap300 (ENSCGOG00000023333)	KCNQ4 (ENSCGOG00000023303)	nfyc (ENSCGOG00000023296)	ENSCGOG00000023288	RPRD1A (ENSCGOG00000023284)
Pike perch	MODERN SPECIES	41													cibar1 (ENSSLUG00000010406) #19	ENSSLUG00000010405	ENSSLUG00000010402	runx1t1 (ENSSLUG00000010101) #22	ENSSLUG00000010079	otud6b (ENSSLUG00000010073) #25	RAB5A (ENSSLUG00000010063)	kat2b (ENSSLUG00000009183)	ENSSLUG00000009098	ZNF385D (ENSSLUG00000009085)	rab25a (ENSSLUG00000009075)	UBQLN4 (ENSSLUG00000009055)	lim2.4 (ENSSLUG00000009042)	TINAGL1 (ENSSLUG00000007965)	cfap300 (ENSSLUG00000007927)	KCNQ4 (ENSSLUG00000007900)	nfyc (ENSSLUG00000007788)	ENSSLUG00000007770	RPRD1A (ENSSLUG00000007758)
Cottioidei	ANCESTRAL SPECIES	16	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000161019	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Lumpfish	MODERN SPECIES	2	ENSCLMG00005001410	ankib1a (ENSCLMG00005001446)	snrpd1 (ENSCLMG00005001478)	ggcta (ENSCLMG00005001500)	adnp2b (ENSCLMG00005001518)	azin1b (ENSCLMG00005001531)	ATP6V1C1 (ENSCLMG00005001565)	ENSCLMG00005001685	spire1a (ENSCLMG00005001728)	klhl38a (ENSCLMG00005001760)	fam91a1 (ENSCLMG00005001778)	lratd2a (ENSCLMG00005001802)	TRIB1 (ENSCLMG00005001804)	cibar1 (ENSCLMG00005001806) #19	triqk (ENSCLMG00005001808) #21	runx1t1 (ENSCLMG00005001825) #22	ENSCLMG00005002564	otud6b (ENSCLMG00005002565) #25	RAB5A (ENSCLMG00005002566)	kat2b (ENSCLMG00005002571)	ENSCLMG00005002593	ZNF385D (ENSCLMG00005002596)	rab25a (ENSCLMG00005002601)	UBQLN4 (ENSCLMG00005002604)	LIM2 (ENSCLMG00005002607)	ENSCLMG00005002608	TINAGL1 (ENSCLMG00005002619)	cfap300 (ENSCLMG00005003216)	imp4 (ENSCLMG00005003227)	KCNQ4 (ENSCLMG00005003246)	nfyc (ENSCLMG00005003265)
Stickleback	MODERN SPECIES	9	mapk15 (ENSGACG00000005266)	grinaa (ENSGACG00000005238)	ENSGACG00000005237	ENSGACG00000005235	ankib1a (ENSGACG00000005220)	snrpd1 (ENSGACG00000005201)	ggcta (ENSGACG00000005197)	adnp2b (ENSGACG00000005193)	azin1b (ENSGACG00000005185)	ATP6V1C1 (ENSGACG00000005164)	spire1a (ENSGACG00000005147)	klhl38a (ENSGACG00000005128)	fam91a1 (ENSGACG00000005113)	TRIB1 (ENSGACG00000005101)	cibar1 (ENSGACG00000005082) #19	runx1t1 (ENSGACG00000005059) #22	ENSGACG00000005052	otud6b (ENSGACG00000005002) #25	RAB5A (ENSGACG00000004997)	kat2b (ENSGACG00000004986)	ENSGACG00000004980	ZNF385D (ENSGACG00000004976)	rab25a (ENSGACG00000004965)	UBQLN4 (ENSGACG00000004959)	LIM2 (ENSGACG00000004952)	TINAGL1 (ENSGACG00000004892)	cfap300 (ENSGACG00000004879)	KCNQ4 (ENSGACG00000004872)	nfyc (ENSGACG00000004846)	ENSGACG00000004837	RPRD1A (ENSGACG00000004817)
Ballan wrasse	MODERN SPECIES	539																runx1t1 (ENSLBEG00000002616) #22	ENSLBEG00000002570	ENSLBEG00000002543	RAB5A (ENSLBEG00000002516)	kat2b (ENSLBEG00000002439)	ENSLBEG00000002405	ZNF385D (ENSLBEG00000002390)	rab25a (ENSLBEG00000002367)	UBQLN4 (ENSLBEG00000002320)	LIM2 (ENSLBEG00000002300)	TINAGL1 (ENSLBEG00000002245)	cfap300 (ENSLBEG00000002224)	KCNQ4 (ENSLBEG00000002107)	nfyc (ENSLBEG00000001936)
Percomorphaceae_D	ANCESTRAL SPECIES	14	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Carangaria	ANCESTRAL SPECIES	14	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Carangaria_A	ANCESTRAL SPECIES	16	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT01030000234950	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Seriola	ANCESTRAL SPECIES	12	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT01030000234950	ENSGT00950000183176.b.f #22	ENSGT00940000181982	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Yellowtail amberjack	MODERN SPECIES	2890	ENSSLDG00000012445	ankib1a (ENSSLDG00000011965)	snrpd1 (ENSSLDG00000011858)	ggcta (ENSSLDG00000011833)	adnp2b (ENSSLDG00000011825)	azin1b (ENSSLDG00000011808)	ATP6V1C1 (ENSSLDG00000011761)	ENSSLDG00000011748	spire1a (ENSSLDG00000011546)	klhl38a (ENSSLDG00000011472)	fam91a1 (ENSSLDG00000011415)	lratd2a (ENSSLDG00000011397)	TRIB1 (ENSSLDG00000011384)	cibar1 (ENSSLDG00000011251) #19	ENSSLDG00000011209	runx1t1 (ENSSLDG00000011172) #22	ENSSLDG00000011146	otud6b (ENSSLDG00000011101) #25	RAB5A (ENSSLDG00000011069)	kat2b (ENSSLDG00000010977)	ENSSLDG00000010937	ZNF385D (ENSSLDG00000010909)	rab25a (ENSSLDG00000010880)	UBQLN4 (ENSSLDG00000010839)	lim2.4 (ENSSLDG00000010807)	TINAGL1 (ENSSLDG00000010762)	cfap300 (ENSSLDG00000010739)	KCNQ4 (ENSSLDG00000010705)	nfyc (ENSSLDG00000010606)	ENSSLDG00000010572	RPRD1A (ENSSLDG00000010537)
Greater amberjack	MODERN SPECIES	48	ENSSDUG00000010631	ankib1a (ENSSDUG00000010560)	snrpd1 (ENSSDUG00000010521)	ggcta (ENSSDUG00000010492)	adnp2b (ENSSDUG00000010479)	azin1b (ENSSDUG00000010460)	ATP6V1C1 (ENSSDUG00000010405)	ENSSDUG00000010387	spire1a (ENSSDUG00000010221)	klhl38a (ENSSDUG00000010166)	fam91a1 (ENSSDUG00000010053)	lratd2a (ENSSDUG00000010026)	TRIB1 (ENSSDUG00000010011)	cibar1 (ENSSDUG00000009987) #19	ENSSDUG00000009978	runx1t1 (ENSSDUG00000009928) #22	ENSSDUG00000009886	otud6b (ENSSDUG00000009860) #25	RAB5A (ENSSDUG00000009835)	kat2b (ENSSDUG00000009787)	ENSSDUG00000009765	ZNF385D (ENSSDUG00000009750)	rab25a (ENSSDUG00000009735)	UBQLN4 (ENSSDUG00000009691)	lim2.4 (ENSSDUG00000009670)	TINAGL1 (ENSSDUG00000009649)	cfap300 (ENSSDUG00000009628)	ENSSDUG00000009618	KCNQ4 (ENSSDUG00000009542)	nfyc (ENSSDUG00000009492)	ENSSDUG00000009470
Barramundi perch	MODERN SPECIES	427										klhl38a (ENSLCAG00010006349)	fam91a1 (ENSLCAG00010006280)	lratd2a (ENSLCAG00010006232)	ENSLCAG00010006226	cibar1 (ENSLCAG00010006220) #19	ENSLCAG00010006218	runx1t1 (ENSLCAG00010006125) #22	ENSLCAG00010006096	ENSLCAG00010006092 #25	ENSLCAG00010006037
Pleuronectoidei	ANCESTRAL SPECIES	15	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b	ENSGT00940000157125
Turbot	MODERN SPECIES	14	ENSSMAG00000034677	ENSSMAG00000008675	ENSSMAG00000008765	ENSSMAG00000008769	ENSSMAG00000008777	azin1b (ENSSMAG00000008784)	ENSSMAG00000008804	ENSSMAG00000008838	spire1a (ENSSMAG00000008849)	klhl38a (ENSSMAG00000008942)	fam91a1 (ENSSMAG00000008966)	lratd2a (ENSSMAG00000009009)	ENSSMAG00000021701	cibar1 (ENSSMAG00000009032) #19	ENSSMAG00000028041	runx1t1 (ENSSMAG00000009153) #22	otud6b (ENSSMAG00000009196) #25	RAB5A (ENSSMAG00000009229)	ENSSMAG00000009616	ENSSMAG00000009694	ZNF385D (ENSSMAG00000009709)	ENSSMAG00000035677	ENSSMAG00000009738	ENSSMAG00000009791	ENSSMAG00000009811	ENSSMAG00000009852	ENSSMAG00000009872	ENSSMAG00000009905	ENSSMAG00000009961	ENSSMAG00000010001	ubp1 (ENSSMAG00000010036)
Tongue sole	MODERN SPECIES	9	fam83hb (ENSCSEG00000018065)	ankib1a (ENSCSEG00000018085)	snrpd1 (ENSCSEG00000018141)	ggcta (ENSCSEG00000018149)	adnp2b (ENSCSEG00000018160)	azin1b (ENSCSEG00000018171)	ATP6V1C1 (ENSCSEG00000018200)	ENSCSEG00000018243	spire1a (ENSCSEG00000018257)	klhl38a (ENSCSEG00000018272)	fam91a1 (ENSCSEG00000018287)	lratd2a (ENSCSEG00000018347)	TRIB1 (ENSCSEG00000018355)	cibar1 (ENSCSEG00000018357) #19	triqk (ENSCSEG00000018367) #21	runx1t1 (ENSCSEG00000018387) #22	otud6b (ENSCSEG00000018406) #25	ENSCSEG00000018420	pex11b (ENSCSEG00000018423)	ilf2 (ENSCSEG00000018437)	ENSCSEG00000018517	ENSCSEG00000018537	ENSCSEG00000018543	ENSCSEG00000018547	ARHGEF2 (ENSCSEG00000018555)	ENSCSEG00000018569	ENSCSEG00000018591	ssr2 (ENSCSEG00000018614)	ENSCSEG00000018630	ANKMY2 (ENSCSEG00000018633)	tspan13b (ENSCSEG00000018642)
Anabantaria	ANCESTRAL SPECIES	16	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Zig-zag eel	MODERN SPECIES	2	ENSMAMG00000013023	ENSMAMG00000012983	ENSMAMG00000012971	ENSMAMG00000012966	ENSMAMG00000024389	azin1b (ENSMAMG00000012944)	ENSMAMG00000012882	ENSMAMG00000012867	spire1a (ENSMAMG00000012814)	klhl38a (ENSMAMG00000012793)	fam91a1 (ENSMAMG00000012723)	lratd2a (ENSMAMG00000012706)	ENSMAMG00000012697	cibar1 (ENSMAMG00000012674) #19	triqk (ENSMAMG00000012671) #21	runx1t1 (ENSMAMG00000012649) #22	ENSMAMG00000012594	otud6b (ENSMAMG00000012583) #25	RAB5A (ENSMAMG00000012573)	KAT2B (ENSMAMG00000012530)	ENSMAMG00000012524	ZNF385D (ENSMAMG00000012483)	ENSMAMG00000012471	ENSMAMG00000012446	ENSMAMG00000012425	ENSMAMG00000012384	ENSMAMG00000012366	ENSMAMG00000012339	ENSMAMG00000012280	ENSMAMG00000012247	fkbp9 (ENSMAMG00000012223)
Anabantoidei	ANCESTRAL SPECIES	19	ENSGT00940000164175.b	ENSGT00940000165758	ENSGT00510000047245	ENSGT00500000044921.a	ENSGT00530000063631.a.k	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000154337.a.b	ENSGT00940000154995	ENSGT00940000154107.b	ENSGT00940000160242.b	ENSGT00940000158230.b.b	ENSGT00940000155620.q	ENSGT01050000244814.a.a.b.b.b.a.a.d.b	ENSGT00940000160023	ENSGT00510000047559	ENSGT00940000159209	ENSGT00940000155689	ENSGT00940000170761	ENSGT00950000183094.b.b
Siamese fighting fish	MODERN SPECIES	2	fam83hb (ENSBSLG00000013483)	ENSBSLG00000013467	ankib1a (ENSBSLG00000013227)	snrpd1 (ENSBSLG00000012386)	ggcta (ENSBSLG00000012379)	adnp2b (ENSBSLG00000012371)	azin1b (ENSBSLG00000012363)	ATP6V1C1 (ENSBSLG00000012246)	ENSBSLG00000012223	spire1a (ENSBSLG00000012175)	fam91a1 (ENSBSLG00000010874)	lratd2a (ENSBSLG00000010697)	TRIB1 (ENSBSLG00000010679)	cibar1 (ENSBSLG00000010613) #19	triqk (ENSBSLG00000010252) #21	runx1t1 (ENSBSLG00000009107) #22	otud6b (ENSBSLG00000008994) #25	RAB5A (ENSBSLG00000008904)	kat2b (ENSBSLG00000008678)	ENSBSLG00000008658	ZNF385D (ENSBSLG00000008655)	rab25a (ENSBSLG00000008617)	UBQLN4 (ENSBSLG00000008535)	LIM2 (ENSBSLG00000008519)	TINAGL1 (ENSBSLG00000008337)	cfap300 (ENSBSLG00000025795)	KCNQ4 (ENSBSLG00000025742)	nfyc (ENSBSLG00000025658)	RPRD1A (ENSBSLG00000025634)	fkbp9 (ENSBSLG00000025558)	crtap (ENSBSLG00000025539)
Climbing perch	MODERN SPECIES	2	ENSATEG00000014325	ENSATEG00000014344	ENSATEG00000014399	ENSATEG00000014422	ENSATEG00000026876	azin1b (ENSATEG00000014436)	ENSATEG00000014449	ENSATEG00000014476	spire1a (ENSATEG00000014493)	klhl38a (ENSATEG00000014558)	fam91a1 (ENSATEG00000014575)	lratd2a (ENSATEG00000014651)	ENSATEG00000014664	cibar1 (ENSATEG00000014669) #19	triqk (ENSATEG00000014685) #21	runx1t1 (ENSATEG00000014697) #22	ENSATEG00000014729	otud6b (ENSATEG00000014744) #25	RAB5A (ENSATEG00000014748)	ENSATEG00000014763	ENSATEG00000014815	ZNF385D (ENSATEG00000014843)	ENSATEG00000014851	ENSATEG00000014859	ENSATEG00000025250	ENSATEG00000014922	ENSATEG00000014937	ENSATEG00000015023	ENSATEG00000015095	ENSATEG00000015157	ENSATEG00000015171
Protacanthopterygii	ANCESTRAL SPECIES	112	ENSGT00940000154984.A	ENSGT00420000029792.qb.b	ENSGT00390000012138.a.b.c.a	ENSGT00940000153446.a.a.w.b	ENSGT00940000154181.b.b	ENSGT00390000013305.a.b	ENSGT00950000182995.e.b.`b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00390000014242.k	ENSGT00390000013934	ENSGT00390000008115	ENSGT01100000263533.b.b.b.a.a.a.a.c.b	ENSGT00940000164972	ENSGT00940000161110.a.b	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT01030000234513.A.a.a.a.b.d.a	ENSGT00940000155722	ENSGT00390000009435
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000183176.b.f.m.a.a #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00950000183176.b.f.m.a.a #22
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000183176.b.f.m.a.a #22
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00950000183176.b.f.m.a.a #22
Chinook salmon	MODERN SPECIES	18	OSBPL6 (ENSOTSG00005044574)	prkra (ENSOTSG00005044570)	ENSOTSG00005044569	ENSOTSG00005044552	CMKLR2 (ENSOTSG00005044548)	ENSOTSG00005044546	INO80D (ENSOTSG00005044544)	STK24 (ENSOTSG00005044523)	DOCK9 (ENSOTSG00005017228)	FARP1 (ENSOTSG00005017102)	ENSOTSG00005017094	ENSOTSG00005017093	ENSOTSG00005017091	ENSOTSG00005017089	ENSOTSG00005017086	ENSOTSG00005017085 #22	CNTNAP5 (ENSOTSG00005017074)	ENSOTSG00005017073	ENSOTSG00005017072	ENSOTSG00005017071	SH3BP4 (ENSOTSG00005017069)	ARL4C (ENSOTSG00005017067)	ARL4C (ENSOTSG00005017066)	ENSOTSG00005016858	arhgap15 (ENSOTSG00005016855)	zeb2a (ENSOTSG00005016854)	ENSOTSG00005016853	ENSOTSG00005016852	acvr2aa (ENSOTSG00005016807)	ENSOTSG00005016802	epc2 (ENSOTSG00005016572)
Huchen	MODERN SPECIES	6481																runx1t1 (ENSHHUG00000002637) #22	ENSHHUG00000002650
Salmoninae	ANCESTRAL SPECIES	1014														ENSGT00950000182986.a.b.b.l.b	ENSGT00390000010285.c #19	ENSGT00950000183176.b.f.m.a.b #22	ENSGT00950000183176.b.f.m.b #22	ENSGT00940000164463
Salmoninae_a	ANCESTRAL SPECIES	28	ENSGT00440000035378.c.b	ENSGT00940000153269.b.b.n	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00940000156554.b.d	ENSGT00390000000724.c.b.d	ENSGT00390000003465.b.b.a	ENSGT00940000154697.a.a.a.b	ENSGT00940000154984.A.g	ENSGT00390000012138.a.b.c.a.b	ENSGT00940000154181.b.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a.e	ENSGT00390000009543.p	ENSGT00950000182986.a.b.b.l.a.b	ENSGT00390000010285.c #19	ENSGT00950000183176.b.f.m.a.b #22	ENSGT00940000164066 #24	ENSGT00390000003680.b.g.a #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813.h #29	ENSGT00390000013934	ENSGT00390000008115.n
Oncorhynchus	ANCESTRAL SPECIES	87	ENSGT00940000155788.l	ENSGT00940000160311.a.b	ENSGT00940000158703	ENSGT00940000164643.a.a	ENSGT00940000154984.A.h.b.b.a	ENSGT00420000029792.qb.b	ENSGT00390000012138.a.b.c.a.a.a.a	ENSGT00390000013305.a.b	ENSGT00950000182995.e.b.`b	ENSGT00390000003058.b.a.a.a.a.f	ENSGT00940000157647.c	ENSGT00390000009543.o	ENSGT00940000159198.g.k.b	ENSGT00950000182986.a.b.b.k	ENSGT00390000017350 #21	ENSGT00950000183176.b.f.m.a.b #22	ENSGT00950000183176.b.f.n #22	ENSGT00390000012840 #25	ENSGT00390000003680.b.g.b #26	ENSGT00390000007813.g #29	ENSGT00390000014242.k	ENSGT00390000008115.m	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.b	ENSGT00940000164972.h.a	ENSGT01100000265367	ENSGT00940000155722	ENSGT00390000009435	ENSGT01090000260070.B.j.a	ENSGT00940000159513.j	ENSGT00440000035378.c.a	ENSGT00940000154994.b
Rainbow trout	MODERN SPECIES	24	psmg2 (ENSOMYG00000032486)	ptpn2b (ENSOMYG00000032559)	seh1l (ENSOMYG00000032961)	fam210aa (ENSOMYG00000032979)	rnmt (ENSOMYG00000054773)	ENSOMYG00000003442	ENSOMYG00000053312	ENSOMYG00000033070	ENSOMYG00000064383	klhl38a (ENSOMYG00000033101)	fam91a1 (ENSOMYG00000033172)	ENSOMYG00000075396	lratd2a (ENSOMYG00000033205)	ENSOMYG00000037171	triqk (ENSOMYG00000075945) #21	runx1t1 (ENSOMYG00000074359) #22	ENSOMYG00000076503	otud6b (ENSOMYG00000034094) #25	PIP4P2 (ENSOMYG00000076356) #26	tmem64 (ENSOMYG00000056093) #29	ENSOMYG00000061187	ENSOMYG00000066131	tdp2b (ENSOMYG00000008522)	ENSOMYG00000007296	ENSOMYG00000055727	ENSOMYG00000061117	angpt2b (ENSOMYG00000068292)	ENSOMYG00000049663	ENSOMYG00000075909	ENSOMYG00000073642	ENSOMYG00000052787
Oncorhynchus_a	ANCESTRAL SPECIES	775															ENSGT00390000010285.c #19	ENSGT00950000183176.b.f.m.a.b #22
Coho salmon	MODERN SPECIES	8	angpt2b (ENSOKIG00005021146)	zgc:111986 (ENSOKIG00005021122)	acot13 (ENSOKIG00005021112)	tmem64 (ENSOKIG00005021105) #29	ENSOKIG00005021096	necab1 (ENSOKIG00005021088) #28	pip4p2 (ENSOKIG00005020013) #26	ENSOKIG00005020002	ENSOKIG00005019992	fam91a1 (ENSOKIG00005019809)	ENSOKIG00005019770	lratd2a (ENSOKIG00005019759)	TRIB1 (ENSOKIG00005019754)	ENSOKIG00005019751	cibar1 (ENSOKIG00005019728) #19	ENSOKIG00005019421 #22	ENSOKIG00005019387	ENSOKIG00005019376	ENSOKIG00005019302	ENSOKIG00005019278	mtdha (ENSOKIG00005019265)	rpl30 (ENSOKIG00005019229)	stk3 (ENSOKIG00005018929)	polr2k (ENSOKIG00005018871)	ENSOKIG00005018865	ENSOKIG00005018834	znf706 (ENSOKIG00005018813)	ENSOKIG00005018789	ENSOKIG00005018772	mc5ra (ENSOKIG00005018756)	ENSOKIG00005018747
Huchen	MODERN SPECIES	3479																ENSHHUG00000014643 #22
Salmoninae	ANCESTRAL SPECIES	1014													ENSGT00950000182986.a.b.b.l.b	ENSGT00390000010285.c #19	ENSGT00950000183176.b.f.m.a.b #22	ENSGT00950000183176.b.f.m.b #22	ENSGT00940000164463
Salmoninae_a	ANCESTRAL SPECIES	430																ENSGT00950000183176.b.f.m.b #22	ENSGT00940000164463	ENSGT00390000003680.b.h.a #26
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000183176.b.f.m.b #22
Rainbow trout	MODERN SPECIES	9	ENSOMYG00000006912	stk3 (ENSOMYG00000006983)	ENSOMYG00000054613	ENSOMYG00000070922	rpl30 (ENSOMYG00000007025)	mtdha (ENSOMYG00000064459)	ENSOMYG00000007074	spire1a (ENSOMYG00000007193)	fam91a1 (ENSOMYG00000056174)	ENSOMYG00000055811	lratd2a (ENSOMYG00000006719)	ENSOMYG00000062661	cibar1 (ENSOMYG00000006794) #19	ENSOMYG00000051846	ENSOMYG00000070062	runx1t1 (ENSOMYG00000049231) #22	ENSOMYG00000048347	LRRC69 (ENSOMYG00000064758) #24	pip4p2 (ENSOMYG00000070808) #26	NECAB1 (ENSOMYG00000076168) #28	tmem64 (ENSOMYG00000030894) #29	ENSOMYG00000007370	ENSOMYG00000034129	ENSOMYG00000069461	angpt2b (ENSOMYG00000069799)	ENSOMYG00000067116	ENSOMYG00000058116	ENSOMYG00000070958	ENSOMYG00000070759	ENSOMYG00000059535	gjb9b (ENSOMYG00000064515)
Salmo	ANCESTRAL SPECIES	2	ENSGT00390000003465.b.b.a	ENSGT00940000154697.a.a.a.b	ENSGT00390000008918	ENSGT00940000154984.A.h.a	ENSGT00940000154984.A.g	ENSGT00390000012138.a.b.c.a.b	ENSGT00940000154181.b.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a.e	ENSGT00390000009543.p	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b.k	ENSGT00390000017350 #21	ENSGT00950000182986.a.b.b.l.b	ENSGT00390000010285.c #19	ENSGT00950000183176.b.f.m.b #22	ENSGT00940000164463	ENSGT00390000003680.b.h.a #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813.h #29	ENSGT00390000013934	ENSGT00390000008115.n	ENSGT00940000164972.g.a.b	ENSGT00940000161110.a.b.g.b	ENSGT00940000161110.a.b.h	ENSGT00940000166312.b.a	ENSGT01030000234513.A.a.a.a.b.d.a	ENSGT00940000155722.g	ENSGT00390000009435	ENSGT01090000260070.B.i.a	ENSGT00940000159513.j
River trout	MODERN SPECIES	27																runx1t1 (ENSSTUG00000022454) #22	ENSSTUG00000022444	pip4p2 (ENSSTUG00000022410) #26	tmem64 (ENSSTUG00000022391) #29	ENSSTUG00000022382	acot13 (ENSSTUG00000022361)	zgc:111986 (ENSSTUG00000022324)	ENSSTUG00000022317	ENSSTUG00000022268	ENSSTUG00000022254	gjb9b (ENSSTUG00000022250)	pef1 (ENSSTUG00000022227)	gja4 (ENSSTUG00000022220)	ENSSTUG00000022206	ENSSTUG00000022182	yars1 (ENSSTUG00000022122)
Atlantic salmon	MODERN SPECIES	19	ENSSSAG00000065969	LDLRAD4 (ENSSSAG00000102457)	ZN706 (ENSSSAG00000065979)	ENSSSAG00000096146	stk3 (ENSSSAG00000041996)	rpl30 (ENSSSAG00000066053)	mtdha (ENSSSAG00000066076)	ENSSSAG00000095437	ENSSSAG00000066016	ENSSSAG00000099100	fam91a1 (ENSSSAG00000084387)	ENSSSAG00000117940	ENSSSAG00000116859	cibar1 (ENSSSAG00000066097) #19	ENSSSAG00000096451	runx1t1 (ENSSSAG00000089484) #22	ENSSSAG00000066155	ENSSSAG00000090991	pip4p2 (ENSSSAG00000040160) #26	NECAB1 (ENSSSAG00000086143) #28	tmem64 (ENSSSAG00000090737) #29	acot13 (ENSSSAG00000066179)	ENSSSAG00000109128	ENSSSAG00000100163	ENSSSAG00000040438	ENSSSAG00000109935
Salmoninae	ANCESTRAL SPECIES	280											ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a.e	ENSGT00390000009543	ENSGT00950000182986.a.b.b.k	ENSGT00390000017350 #21	ENSGT00950000183176.b.f.n #22	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00390000014242.k	ENSGT00390000008115.m	ENSGT00390000013934	ENSGT00390000008115.n	ENSGT00940000164972.g.a	ENSGT00940000161110.a.b	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT01030000234513.A.a.a.a.b.d.a	ENSGT00940000155722	ENSGT00390000009435
Huchen	MODERN SPECIES	3742																ENSHHUG00000034049 #22	eif2b5 (ENSHHUG00000034042)	ENSHHUG00000034038	ENSHHUG00000034011
Salmoninae_a	ANCESTRAL SPECIES	5	ENSGT00940000158862.m.b	ENSGT00940000155788.l	ENSGT00940000160311.a.b	ENSGT00940000164643.a.a	ENSGT00940000154984.A.h.b.b.a	ENSGT00420000029792.qb.b	ENSGT00390000012138.a.b.c.a.a	ENSGT00390000013305.a.b	ENSGT00950000182995.e.b.`b	ENSGT00390000003058.b.a.a.a.a.f	ENSGT00940000157647.c	ENSGT00390000009543.o	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b.k	ENSGT00390000017350 #21	ENSGT00950000183176.b.f.n #22	ENSGT00390000012840 #25	ENSGT00390000003680.b.g.b #26	ENSGT00390000007813.g #29	ENSGT00390000014242.k	ENSGT00390000008115.m	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.b	ENSGT00940000164972.h	ENSGT00940000161110.a.b.g.a	ENSGT00940000164972.g.a	ENSGT00940000161110.a.b.h	ENSGT00940000166312.b.a	ENSGT01030000234513.A.a.a.a.b.d.a	ENSGT00940000155722	ENSGT00390000009435	ENSGT01090000260070.B.j
Oncorhynchus	ANCESTRAL SPECIES	87	ENSGT00940000160311.a.b	ENSGT00940000158703	ENSGT00940000164643.a.a	ENSGT00940000154984.A.h.b.b.a	ENSGT00420000029792.qb.b	ENSGT00390000012138.a.b.c.a.a.a.a	ENSGT00390000013305.a.b	ENSGT00950000182995.e.b.`b	ENSGT00390000003058.b.a.a.a.a.f	ENSGT00940000157647.c	ENSGT00390000009543.o	ENSGT00940000159198.g.k.b	ENSGT00950000182986.a.b.b.k	ENSGT00390000017350 #21	ENSGT00950000183176.b.f.m.a.b #22	ENSGT00950000183176.b.f.n #22	ENSGT00390000012840 #25	ENSGT00390000003680.b.g.b #26	ENSGT00390000007813.g #29	ENSGT00390000014242.k	ENSGT00390000008115.m	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.b	ENSGT00940000164972.h.a	ENSGT01100000265367	ENSGT00940000155722	ENSGT00390000009435	ENSGT01090000260070.B.j.a	ENSGT00940000159513.j	ENSGT00440000035378.c.a	ENSGT00940000154994.b	ENSGT00940000166437.e
Oncorhynchus_a	ANCESTRAL SPECIES	100	ENSGT00940000155788.l	ENSGT00940000160311.a.b	ENSGT00940000153773.b	ENSGT00940000158703	ENSGT00940000164643.a.a	ENSGT00940000154984.A.h.b.b.a	ENSGT00420000029792.qb.b	ENSGT00390000012138.a.b.c.a.a.a.a	ENSGT00390000013305.a.b	ENSGT00950000182995.e.b.`b	ENSGT00390000003058.b.a.a.a.a.f	ENSGT00940000157647.c	ENSGT00390000009543.o	ENSGT00940000159198.g.k.b	ENSGT00950000182986.a.b.b.k	ENSGT00950000183176.b.f.n #22	ENSGT00390000012840 #25	ENSGT00390000003680.b.g.b #26	ENSGT00390000007813.g #29	ENSGT00390000014242.k	ENSGT00390000008115.m	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.b	ENSGT00940000164972.h.a	ENSGT00940000161110.a.b.g.a	ENSGT00940000155722	ENSGT00390000009435	ENSGT01090000260070.B.j.a	ENSGT00940000159513.j	ENSGT00440000035378.c.a	ENSGT00940000154994.b	ENSGT00940000166437.e
Chinook salmon	MODERN SPECIES	29	ENSOTSG00005020474	CNGA3 (ENSOTSG00005020476)	ENSOTSG00005020477	ENSOTSG00005020479	ENSOTSG00005020481	ENSOTSG00005020483	ENSOTSG00005020490	si:dkey-51e6.1 (ENSOTSG00005020649)	si:dkey-97o5.1 (ENSOTSG00005020650)	scyl3 (ENSOTSG00005020653)	ENSOTSG00005020660	ENSOTSG00005020665	kyat3.2 (ENSOTSG00005020669)	pkn2b (ENSOTSG00005020874)	chst12a (ENSOTSG00005031446)	ENSOTSG00005031447 #22	ENSOTSG00005031449	SLC35D1 (ENSOTSG00005031460)	ENSOTSG00005031473	ENSOTSG00005031474	RS1 (ENSOTSG00005031475)
Coho salmon	MODERN SPECIES	5	ENSOKIG00005007754	STK3 (ENSOKIG00005007669)	ENSOKIG00005007649	RIDA (ENSOKIG00005007585)	rpl30 (ENSOKIG00005007569)	rrm2b (ENSOKIG00005007526)	azin1b (ENSOKIG00005007443)	spire1a (ENSOKIG00005007331)	klhl38a (ENSOKIG00005007308)	fam91a1 (ENSOKIG00005006928)	lratd2a (ENSOKIG00005006899)	TRIB1 (ENSOKIG00005006882)	ENSOKIG00005006862	ENSOKIG00005006845	ENSOKIG00005006836	runx1t1 (ENSOKIG00005006631) #22	otud6b (ENSOKIG00005006607) #25	PIP4P2 (ENSOKIG00005006590) #26	tmem64 (ENSOKIG00005006579) #29	ENSOKIG00005006558	zgc:111986 (ENSOKIG00005006539)	ENSOKIG00005006531	angpt2b (ENSOKIG00005006462)	ENSOKIG00005006454	ENSOKIG00005005901	pef1 (ENSOKIG00005005818)	smim12 (ENSOKIG00005005808)	gja4 (ENSOKIG00005005803)	ENSOKIG00005005798	dlgap3 (ENSOKIG00005005763)	fuca1.2 (ENSOKIG00005005749)
Salmo	ANCESTRAL SPECIES	270																ENSGT00950000183176.b.f.n #22	ENSGT00390000012840 #25	ENSGT00390000003680.b.g.b #26	ENSGT00390000007813.g #29	ENSGT00390000014242.k	ENSGT00390000008115.m	ENSGT00940000164972.g.a.a	ENSGT00940000161110.a.b.g.a
Atlantic salmon	MODERN SPECIES	5	ENSSSAG00000093074	ENSSSAG00000091050	ENSSSAG00000111569	ENSSSAG00000115063	rrm2b (ENSSSAG00000098746)	azin1b (ENSSSAG00000042061)	spire1a (ENSSSAG00000041867)	klhl38a (ENSSSAG00000088235)	ENSSSAG00000090890	fam91a1 (ENSSSAG00000041723)	lratd2a (ENSSSAG00000102747)	ENSSSAG00000096037	triqk (ENSSSAG00000097303) #21	otud6b (ENSSSAG00000100428) #25	ENSSSAG00000052862	RUNX1T1 (ENSSSAG00000010232) #22	PIP4P2 (ENSSSAG00000066143) #26	tmem64 (ENSSSAG00000090308) #29	ENSSSAG00000112736	ENSSSAG00000118092	angpt2b (ENSSSAG00000086730)	ENSSSAG00000118805	ENSSSAG00000105880	ENSSSAG00000039685	pef1 (ENSSSAG00000039627)	smim12 (ENSSSAG00000092642)	gja4 (ENSSSAG00000095274)	dlgap3 (ENSSSAG00000039326)	ENSSSAG00000115433	ENSSSAG00000099431	fuca1.2 (ENSSSAG00000055028)
River trout	MODERN SPECIES	29	stk3 (ENSSTUG00000035946)	ENSSTUG00000035984	rnf19a (ENSSTUG00000035999)	pabpc1b (ENSSTUG00000036060)	grhl2b (ENSSTUG00000036430)	NCALD (ENSSTUG00000036557)	ENSSTUG00000036564	ENSSTUG00000036573	psmg2 (ENSSTUG00000036584)	ptpn2b (ENSSTUG00000036595)	seh1l (ENSSTUG00000036619)	fam210aa (ENSSTUG00000036818)	rnmt (ENSSTUG00000036823)	ENSSTUG00000036843	ENSSTUG00000036845	runx1t1 (ENSSTUG00000037460) #22	ENSSTUG00000037659	otud6b (ENSSTUG00000037671) #25	pip4p2 (ENSSTUG00000037692) #26	tmem64 (ENSSTUG00000037727) #29	ENSSTUG00000037730	tdp2b (ENSSTUG00000037734)	zgc:111986 (ENSSTUG00000037742)	ENSSTUG00000037764	ENSSTUG00000037774	angpt2b (ENSSTUG00000037787)	ENSSTUG00000037861	ENSSTUG00000037889	ENSSTUG00000037893	ENSSTUG00000037901	ENSSTUG00000037913
Northern pike	MODERN SPECIES	9	yars1 (ENSELUG00000017171)	ENSELUG00000017134	ENSELUG00000000640	rbbp4 (ENSELUG00000017073)	rims3 (ENSELUG00000017025)	smap2 (ENSELUG00000017011)	ENSELUG00000032187	ENSELUG00000016982	FKBP14 (ENSELUG00000016947)	klhl38a (ENSELUG00000016921)	fam91a1 (ENSELUG00000016894)	lratd2a (ENSELUG00000016790)	TRIB1 (ENSELUG00000016780)	cibar1 (ENSELUG00000016762) #19	triqk (ENSELUG00000016719) #21	runx1t1 (ENSELUG00000016688) #22	ENSELUG00000034648	ENSELUG00000016652	pip4p2 (ENSELUG00000016538) #26	necab1 (ENSELUG00000016505) #28	tmem64 (ENSELUG00000016459) #29	tdp2b (ENSELUG00000016449)	acot13 (ENSELUG00000016423)	zgc:111986 (ENSELUG00000016413)	ENSELUG00000030468	ENSELUG00000033458	ENSELUG00000016397	angpt2b (ENSELUG00000016379)	ENSELUG00000027871	ENSELUG00000028634	ENSELUG00000016320
Otomorpha	ANCESTRAL SPECIES	197				ENSGT00940000154181.b.b	ENSGT00390000013305.a.b	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00390000014242.k	ENSGT00390000013934	ENSGT00390000008115	ENSGT00940000153270.a	ENSGT00530000068834	ENSGT00940000153717.a.a	ENSGT00940000165898	ENSGT01030000234597.a.b.b.e.b	ENSGT00940000157068.c	ENSGT00940000177780
Clupeiformes	ANCESTRAL SPECIES	58	ENSGT00940000154984.A	ENSGT00420000029792.qb.a.n	ENSGT00390000012138.a.b.d	ENSGT00940000153446.a.a.w.b	ENSGT00940000154181.b.b	ENSGT00390000013305.a.b	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.b	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT01030000234950	ENSGT00950000183176.b.f #22	ENSGT00980000199767	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00390000014242.k	ENSGT00390000013934	ENSGT00390000008115	ENSGT00940000153270.a	ENSGT00940000153717.a.a	ENSGT00940000165898	ENSGT01030000234597.a.b.b.e.b	ENSGT00940000157068.c	ENSGT00940000157988	ENSGT00940000155294
Atlantic herring	MODERN SPECIES	10	stk3 (ENSCHAG00000009925)	rida (ENSCHAG00000009857)	rpl30 (ENSCHAG00000009819)	laptm4b (ENSCHAG00000009800)	mtdha (ENSCHAG00000009785)	rrm2b (ENSCHAG00000008513)	azin1b (ENSCHAG00000008432)	atp6v1c1b (ENSCHAG00000008212)	spire1a (ENSCHAG00000008106)	klhl38a (ENSCHAG00000008084)	fam91a1 (ENSCHAG00000007774)	lratd2a (ENSCHAG00000007738)	TRIB1 (ENSCHAG00000007726)	cibar1 (ENSCHAG00000007574) #19	ENSCHAG00000007544	runx1t1 (ENSCHAG00000007293) #22	ENSCHAG00000007243	otud6b (ENSCHAG00000007229) #25	pip4p2 (ENSCHAG00000007186) #26	ENSCHAG00000006900	ENSCHAG00000006841	osbpl3a (ENSCHAG00000006377)	ENSCHAG00000006280	cbx3a (ENSCHAG00000006118)	snx10a (ENSCHAG00000006049)	hoxa1a (ENSCHAG00000006006)	ENSCHAG00000005986	evx1 (ENSCHAG00000005937)	ASTE1 (ENSCHAG00000005883)	matn1 (ENSCHAG00000005773)	hibadha (ENSCHAG00000005661)
Denticle herring	MODERN SPECIES	12	ENSDCDG00000025897	vps45 (ENSDCDG00000025870)	plekho1a (ENSDCDG00000025866)	anp32e (ENSDCDG00000025863)	cart4 (ENSDCDG00000025860)	jtb (ENSDCDG00000025858)	azin1b (ENSDCDG00000025856)	ATP6V1C1 (ENSDCDG00000025817)	spire1a (ENSDCDG00000023935)	klhl38a (ENSDCDG00000023913)	fam91a1 (ENSDCDG00000023896)	lratd2a (ENSDCDG00000023893)	TRIB1 (ENSDCDG00000023890)	cibar1 (ENSDCDG00000023881) #19	ENSDCDG00000023878	runx1t1 (ENSDCDG00000031642) #22	otud6b (ENSDCDG00000031604) #25	pip4p2 (ENSDCDG00000031599) #26	necab1 (ENSDCDG00000031589) #28	tmem64 (ENSDCDG00000031570) #29	tdp2b (ENSDCDG00000031565)	acot13 (ENSDCDG00000031562)	zgc:111986 (ENSDCDG00000031560)	ENSDCDG00000031558	gmnn (ENSDCDG00000031554)	ripor2 (ENSDCDG00000031505)	si:dkeyp-120h9.1 (ENSDCDG00000031496)	stmn2b (ENSDCDG00000031493)	hey1 (ENSDCDG00000031489)	zbtb10 (ENSDCDG00000031487)	tpd52 (ENSDCDG00000031486)
Otophysi	ANCESTRAL SPECIES	140	ENSGT00940000154984.A	ENSGT00420000029792.qb.a	ENSGT00390000012138.a.b.d	ENSGT00940000153446.a.a.w.b	ENSGT00940000154181.b.b	ENSGT00390000013305.a.b	ENSGT00950000182995.e.b.`b	ENSGT00940000178526	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25
Characiphysae	ANCESTRAL SPECIES	51	ENSGT00390000012138.a.b.d	ENSGT00940000153446.a.a.w.b	ENSGT00940000154181.b.b	ENSGT00390000013305.a.b	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.a.h	ENSGT00940000178526	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000166582	ENSGT00940000156221	ENSGT00940000160103	ENSGT00940000158302.d.b	ENSGT00940000161290	ENSGT00940000158387	ENSGT00940000156923	ENSGT00950000182883.a.b.a	ENSGT00940000155427.b	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00390000014242.k
Channel catfish	MODERN SPECIES	3	thrb (ENSIPUG00000011865)	rarb (ENSIPUG00000011940)	TOP2B (ENSIPUG00000012089)	ngly1 (ENSIPUG00000012265)	adnp2b (ENSIPUG00000012367)	txnl4a (ENSIPUG00000012382)	atp6v1c1b (ENSIPUG00000012415)	ENSIPUG00000012463	spire1a (ENSIPUG00000012501)	klhl38a (ENSIPUG00000012729)	fam91a1 (ENSIPUG00000012746)	lratd2a (ENSIPUG00000012820)	Trib1 (ENSIPUG00000012834)	fam92a1 (ENSIPUG00000012853) #19	triqk (ENSIPUG00000012879) #21	runx1t1 (ENSIPUG00000012904) #22	lrrc69 (ENSIPUG00000012931)	otud6b (ENSIPUG00000012953) #25	zmym4 (ENSIPUG00000013026)	SFPQ (ENSIPUG00000013076)	ADGRB2 (ENSIPUG00000013160)	ENSIPUG00000013254	ENSIPUG00000013258	ENSIPUG00000013267	col9a2 (ENSIPUG00000013295)	smap2 (ENSIPUG00000013352)	phf14 (ENSIPUG00000013425)	nxph1 (ENSIPUG00000013532)	thsd7aa (ENSIPUG00000013547)	tmem55a (ENSIPUG00000013609) #26	necab1 (ENSIPUG00000013641) #28
Characiphysae_b	ANCESTRAL SPECIES	1	ENSGT00390000012138.a.b.d	ENSGT00940000153446.a.a.w.b	ENSGT00940000154181.b.b	ENSGT00390000013305.a.b	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.a.h	ENSGT00940000178526	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000166582	ENSGT00940000156221	ENSGT00940000160103	ENSGT00940000158302.d.b	ENSGT00940000161290	ENSGT00940000158387	ENSGT00940000156923	ENSGT00950000182883.a.b.a	ENSGT00940000155427.b	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00390000014242.k
Characoidei	ANCESTRAL SPECIES	3	ENSGT00420000029792.qb.a	ENSGT00390000012138.a.b.d	ENSGT00940000153446.a.a.w.b	ENSGT00940000154181.b.b	ENSGT00390000013305.a.b	ENSGT00950000182995.e.b.`b	ENSGT00390000004263.a.d.a.h	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00390000012840 #25	ENSGT00940000166582	ENSGT00940000156221	ENSGT00940000160103	ENSGT00940000161290	ENSGT00940000158387	ENSGT00940000156923	ENSGT00950000182883.a.b.a	ENSGT00940000155427.b	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00390000014242.k	ENSGT00390000016199.b
Red-bellied piranha	MODERN SPECIES	1	ENSPNAG00000011524	rpl30 (ENSPNAG00000011570)	laptm4b (ENSPNAG00000001815)	mtdha (ENSPNAG00000001826)	rrm2b (ENSPNAG00000011635)	azin1b (ENSPNAG00000011650)	atp6v1c1b (ENSPNAG00000011686)	ENSPNAG00000011691	spire1a (ENSPNAG00000001932)	klhl38a (ENSPNAG00000005712)	fam91a1 (ENSPNAG00000011907)	lratd2a (ENSPNAG00000011922)	TRIB1 (ENSPNAG00000011931)	cibar1 (ENSPNAG00000011941) #19	triqk (ENSPNAG00000011951) #21	runx1t1 (ENSPNAG00000011982) #22	ENSPNAG00000005131	ENSPNAG00000002057	otud6b (ENSPNAG00000012027) #25	zmym4.2 (ENSPNAG00000012109)	ENSPNAG00000012129	sfpq (ENSPNAG00000002128)	ADGRB2 (ENSPNAG00000012254)	col9a2 (ENSPNAG00000012328)	smap2 (ENSPNAG00000012352)	phf14 (ENSPNAG00000012397)
Mexicana tetra	MODERN SPECIES	15	rida (ENSAMXG00000031748)	rpl30 (ENSAMXG00000037627)	laptm4b (ENSAMXG00000034415)	mtdha (ENSAMXG00000036674)	rrm2b (ENSAMXG00000031469)	azin1b (ENSAMXG00000011357)	atp6v1c1b (ENSAMXG00000011365)	ENSAMXG00000011376	spire1a (ENSAMXG00000011397)	klhl38a (ENSAMXG00000041010)	fam91a1 (ENSAMXG00000011430)	lratd2a (ENSAMXG00000031778)	TRIB1 (ENSAMXG00000043443)	cibar1 (ENSAMXG00000011452) #19	triqk (ENSAMXG00000031056) #21	runx1t1 (ENSAMXG00000011474) #22	ENSAMXG00000044068	otud6b (ENSAMXG00000011487) #25	ENSAMXG00000011497	zmym4.2 (ENSAMXG00000011511)	sfpq (ENSAMXG00000011538)	ENSAMXG00000042350	sox4a (ENSAMXG00000025426)	ENSAMXG00000039034	nrsn1l (ENSAMXG00000043834)	lpcat1 (ENSAMXG00000011948)	mrpl36 (ENSAMXG00000036656)	ndufs6 (ENSAMXG00000041388)	irx4b (ENSAMXG00000035483)	e2f3 (ENSAMXG00000036295)	srfbp1 (ENSAMXG00000040976)
Electric eel	MODERN SPECIES	54	pbdc1 (ENSEEEG00000008400)	xpo7 (ENSEEEG00000008408)	ENSEEEG00000008551	GFRA2 (ENSEEEG00000008553)	TLE3 (ENSEEEG00000008577)	paqr5b (ENSEEEG00000008824)	glceb (ENSEEEG00000008839)	CORO2B (ENSEEEG00000008840)	anp32a (ENSEEEG00000008862)	klhl38a (ENSEEEG00000008864)	fam91a1 (ENSEEEG00000008865)	lratd2a (ENSEEEG00000008869)	TRIB1 (ENSEEEG00000008870)	cibar1 (ENSEEEG00000008871) #19	triqk (ENSEEEG00000008872) #21	runx1t1 (ENSEEEG00000008874) #22	ENSEEEG00000008909	otud6b (ENSEEEG00000008912) #25	zmym4.2 (ENSEEEG00000008913)	sfpq (ENSEEEG00000008914)	smpd2a (ENSEEEG00000008916)	ENSEEEG00000008917	arl6ip5b (ENSEEEG00000008919)	srsf6a (ENSEEEG00000008920)	L3MBTL1 (ENSEEEG00000008921)	sgk2a (ENSEEEG00000008927)	mybl2a (ENSEEEG00000008975)	adtrp1 (ENSEEEG00000008976)	zgc:171857 (ENSEEEG00000008977)	WNT7A (ENSEEEG00000008978)	FBLN2 (ENSEEEG00000008980)
Cyprinoidei	ANCESTRAL SPECIES	15	ENSGT00940000154984.A	ENSGT00420000029792.qb.a	ENSGT00390000012138.a.b.d	ENSGT00940000153446.a.a.w.b	ENSGT00940000154181.b.b	ENSGT00390000013305.a.b	ENSGT00950000182995.e.b.`b	ENSGT00940000178526	ENSGT00390000003058.b.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f #22	ENSGT00940000164463	ENSGT00980000199767	ENSGT00390000012840 #25	ENSGT00550000075032	ENSGT00940000155994	ENSGT00940000162490	ENSGT00390000013383	ENSGT00940000163607	ENSGT00940000157173	ENSGT00940000171718	ENSGT00950000183084.b.a.a.b.e.a	ENSGT00950000183084.b.a.a.a	ENSGT00940000157473.b.a	ENSGT00940000155783	ENSGT00390000000916
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	51	ENSGT00390000017767.b.b.a.c.b	ENSGT00940000154984.A.b	ENSGT00420000029792.qb.a.k.a	ENSGT00390000012138.a.b.d	ENSGT00940000153446.a.a.w.b	ENSGT00940000154181.b.b.b	ENSGT00390000013305.a.b.c.a	ENSGT00950000182995.e.b.`b.e	ENSGT00390000004263.a.d.a.c.b	ENSGT00940000178526.a	ENSGT00390000003058.b.a.a.a.a.b	ENSGT00390000009543.m	ENSGT00950000182986.a.b.b.n	ENSGT00390000010285.c.kc #19	ENSGT01030000234950.a	ENSGT00950000183176.b.f.o #22	ENSGT00940000164463	ENSGT00550000075032.a	ENSGT00940000155994.o.b	ENSGT00940000162490.b	ENSGT00390000013383.u.b	ENSGT00940000163607.a	ENSGT00940000157173.a	ENSGT00940000155783.i.a	ENSGT00390000000916.i	ENSGT00450000040303.r	ENSGT01030000234543.F.f.b	ENSGT00940000159104.c.d	ENSGT00940000158587.c.b.j	ENSGT00950000182872.f.a.b.p.e	ENSGT01030000234863.b.a
Goldfish	MODERN SPECIES	1975	stk3 (ENSCARG00000048809)	rida (ENSCARG00000048745)	rpl30 (ENSCARG00000048712)	laptm4b (ENSCARG00000048631)	mtdha (ENSCARG00000048505)	rrm2b (ENSCARG00000047731)	azin1b (ENSCARG00000047548)	atp6v1c1b (ENSCARG00000047361)	spire1a (ENSCARG00000046938)	fam91a1 (ENSCARG00000041789)	lratd2a (ENSCARG00000041603)	TRIB1 (ENSCARG00000041596)	cibar1 (ENSCARG00000041557) #19	ENSCARG00000041528	ENSCARG00000041519	runx1t1 (ENSCARG00000040877) #22	ENSCARG00000040817	pex1 (ENSCARG00000039825)	elmo1 (ENSCARG00000034640)	rp9 (ENSCARG00000034411)	si:dkey-184p18.2 (ENSCARG00000034388)	poc1bl (ENSCARG00000034307)	ENSCARG00000034207
Cyprininae_a	ANCESTRAL SPECIES	119	ENSGT00940000154984.A.b	ENSGT00420000029792.qb.a.k.a	ENSGT00390000012138.a.b.d	ENSGT00940000153446.a.a.w.b.b	ENSGT00940000154181.b.b.b	ENSGT00390000013305.a.b.c.a	ENSGT00950000182995.e.b.`b.e	ENSGT00390000004263.a.d.a.c.b	ENSGT00940000178526.a	ENSGT00390000003058.b.a.a.a.a.b	ENSGT00940000157647.c.b	ENSGT00390000009543.m	ENSGT00950000182986.a.b.b.n	ENSGT00390000010285.c.kc #19	ENSGT01030000234950.a	ENSGT00950000183176.b.f.o #22	ENSGT00940000164463	ENSGT00550000075032.a	ENSGT00940000155994.o.b	ENSGT00940000162490.b	ENSGT00390000013383.u.b	ENSGT00940000163607.a	ENSGT00940000157173.a	ENSGT00940000155783.i.a	ENSGT00390000000916.i	ENSGT00450000040303.r	ENSGT01030000234543.F.f.b	ENSGT00940000159104.c.d	ENSGT00940000158587.c.b.j	ENSGT00950000182872.f.a.b.p.e	ENSGT01030000234863.b.a
Common carp reference	MODERN SPECIES	31	stk3 (ENSCCRG00000058673)	rida (ENSCCRG00000060151)	rpl30 (ENSCCRG00000054990)	laptm4b (ENSCCRG00000005969)	mtdha (ENSCCRG00000005979)	rrm2b (ENSCCRG00000006143)	azin1b (ENSCCRG00000007380)	atp6v1c1b (ENSCCRG00000006410)	ENSCCRG00000006381	spire1a (ENSCCRG00000042431)	ENSCCRG00000042421	fam91a1 (ENSCCRG00000049964)	ENSCCRG00000020372	cibar1 (ENSCCRG00000020373) #19	ENSCCRG00000074327	runx1t1 (ENSCCRG00000004819) #22	ENSCCRG00000050815	pex1 (ENSCCRG00000050804)	elmo1 (ENSCCRG00000005021)	rp9 (ENSCCRG00000048663)	si:dkey-184p18.2 (ENSCCRG00000079262)	poc1bl (ENSCCRG00000048657)	ENSCCRG00000004723	gabbr2 (ENSCCRG00000058382)	elp2 (ENSCCRG00000009307)	abitram (ENSCCRG00000009316)	ctnnal1 (ENSCCRG00000009325)	sla1a (ENSCCRG00000009750)	ccn4a (ENSCCRG00000082712)	ndrg1a (ENSCCRG00000066791)	wdyhv1 (ENSCCRG00000059656)
Golden-line barbel	MODERN SPECIES	565	ENSSGRG00000049989	RPL30 (ENSSGRG00000049995)	laptm4b (ENSSGRG00000050057)	ENSSGRG00000050061	rrm2b (ENSSGRG00000050062)	azin1b (ENSSGRG00000050240)	atp6v1c1b (ENSSGRG00000050241)	ENSSGRG00000050314	spire1a (ENSSGRG00000050319)	klhl38a (ENSSGRG00000050330)	fam91a1 (ENSSGRG00000050341)	lratd2a (ENSSGRG00000050722)	TRIB1 (ENSSGRG00000050723)	cibar1 (ENSSGRG00000050724) #19	ENSSGRG00000050725	runx1t1 (ENSSGRG00000050737) #22	ENSSGRG00000051270	pex1 (ENSSGRG00000051271)	elmo1 (ENSSGRG00000051290)	rp9 (ENSSGRG00000052107)	ENSSGRG00000052108	poc1bl (ENSSGRG00000052110)	GALNT12 (ENSSGRG00000052115)	gabbr2 (ENSSGRG00000052121)	ENSSGRG00000052124	elp2 (ENSSGRG00000052126)	abitram (ENSSGRG00000052127)	ctnnal1 (ENSSGRG00000052128)	sla1a (ENSSGRG00000052130)	ccn4a (ENSSGRG00000052131)	ndrg1a (ENSSGRG00000052137)
Cyprininae	ANCESTRAL SPECIES	369	ENSGT00390000017767.b.b.a.d	ENSGT00940000154984.A.a	ENSGT00420000029792.qb.a.k.b	ENSGT00940000154181.b.b.a	ENSGT00390000013305.a.b.c.b	ENSGT00950000182995.e.b.`b.f	ENSGT00390000004263.a.d.a.c.a	ENSGT00940000178526.b	ENSGT00390000003058.b.a.a.a.a.a	ENSGT00940000157647.c	ENSGT00390000009543.n	ENSGT00940000159198.g.cb	ENSGT00950000182986.a.b.b.m	ENSGT00390000010285.c.jc #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f.p #22	ENSGT00980000199767	ENSGT00390000012840 #25	ENSGT00550000075032.b	ENSGT00940000155994.o.a	ENSGT00940000162490.a	ENSGT00390000013383.u.a	ENSGT00940000163607.b	ENSGT00940000157173.b	ENSGT00940000155783.i.b	ENSGT00390000000916.j	ENSGT00450000040303.q	ENSGT01030000234543.F.f.a	ENSGT00940000159104.c.c	ENSGT00940000158587.c.b.i	ENSGT00950000182872.f.a.b.p.f
Cyprininae_a	ANCESTRAL SPECIES	1	ENSGT00390000017767.b.b.a.c.a	ENSGT00940000154984.A.a	ENSGT00940000153446.a.a.w.b.a	ENSGT00940000154181.b.b.a	ENSGT00390000013305.a.b.c.b	ENSGT00950000182995.e.b.`b.f	ENSGT00390000004263.a.d.a.c.a	ENSGT00940000178526.b	ENSGT00390000003058.b.a.a.a.a.a	ENSGT00940000157647.c.a	ENSGT00390000009543.n	ENSGT00940000159198.g.cb	ENSGT00950000182986.a.b.b.m	ENSGT00390000010285.c.jc #19	ENSGT01030000234950.b	ENSGT00950000183176.b.f.p #22	ENSGT00980000199767	ENSGT00390000012840 #25	ENSGT00550000075032.b	ENSGT00940000155994.o.a	ENSGT00940000162490.a	ENSGT00390000013383.u.a	ENSGT00940000163607.b	ENSGT00940000157173.b	ENSGT00940000155783.i.b	ENSGT00390000000916.j	ENSGT00450000040303.q	ENSGT01030000234543.F.f.a	ENSGT00940000159104.c.c	ENSGT00940000158587.c.b.i	ENSGT00950000182872.f.a.b.p.f
Common carp reference	MODERN SPECIES	12	si:dkey-284p5.3 (ENSCCRG00000066659)	rpl30 (ENSCCRG00000060090)	laptm4b (ENSCCRG00000050377)	mtdha (ENSCCRG00000006095)	rrm2b (ENSCCRG00000072945)	atp6v1c1b (ENSCCRG00000006391)	ENSCCRG00000006397	spire1a (ENSCCRG00000006402)	klhl38a (ENSCCRG00000050082)	fam91a1 (ENSCCRG00000013085)	ENSCCRG00000008608	ENSCCRG00000063450	cibar1 (ENSCCRG00000049490) #19	ENSCCRG00000050087	ENSCCRG00000076420	runx1t1 (ENSCCRG00000052329) #22	otud6b (ENSCCRG00000004867) #25	pex1 (ENSCCRG00000004876)	elmo1 (ENSCCRG00000048700)	rp9 (ENSCCRG00000012864)	si:dkey-184p18.2 (ENSCCRG00000061931)	poc1bl (ENSCCRG00000012922)	ENSCCRG00000012938	gabbr2 (ENSCCRG00000078167)	elp2 (ENSCCRG00000040164)	abitram (ENSCCRG00000071192)	ctnnal1 (ENSCCRG00000040459)	sla1a (ENSCCRG00000010970)	ccn4a (ENSCCRG00000009758)	ndrg1a (ENSCCRG00000009795)	zgc:113424 (ENSCCRG00000010972)
Golden-line barbel	MODERN SPECIES	564																runx1t1 (ENSSGRG00000048409) #22	ENSSGRG00000048834	otud6b (ENSSGRG00000048838) #25	pex1 (ENSSGRG00000048839)	elmo1 (ENSSGRG00000048878)	rp9 (ENSSGRG00000049686)	ENSSGRG00000049687	si:dkey-184p18.2 (ENSSGRG00000049688)	poc1bl (ENSSGRG00000049689)	ENSSGRG00000049692	gabbr2 (ENSSGRG00000049704)	elp2 (ENSSGRG00000049718)	abitram (ENSSGRG00000049806)	ctnnal1 (ENSSGRG00000049807)	sla1a (ENSSGRG00000049810)
Goldfish	MODERN SPECIES	10	rida (ENSCARG00000048893)	RPL30 (ENSCARG00000048866)	laptm4b (ENSCARG00000048769)	mtdha (ENSCARG00000048710)	rrm2b (ENSCARG00000046814)	azin1b (ENSCARG00000046770)	atp6v1c1b (ENSCARG00000046671)	ENSCARG00000046637	spire1a (ENSCARG00000043931)	klhl38a (ENSCARG00000043772)	fam91a1 (ENSCARG00000039030)	lratd2a (ENSCARG00000038882)	TRIB1 (ENSCARG00000038874)	cibar1 (ENSCARG00000038863) #19	triqk (ENSCARG00000038837) #21	runx1t1 (ENSCARG00000037985) #22	otud6b (ENSCARG00000037795) #25	pex1 (ENSCARG00000037349)	elmo1 (ENSCARG00000032197)	rp9 (ENSCARG00000032091)	si:dkey-184p18.2 (ENSCARG00000032078)	poc1bl (ENSCARG00000031980)	GALNT12 (ENSCARG00000031923)	ENSCARG00000031913	gabbr2 (ENSCARG00000031839)	abitram (ENSCARG00000031737)	ctnnal1 (ENSCARG00000031318)	sla1a (ENSCARG00000031295)	ccn4a (ENSCARG00000031278)	ndrg1a (ENSCARG00000030619)	ENSCARG00000030594
Zebrafish	MODERN SPECIES	10	si:dkey-284p5.3 (ENSDARG00000095638)	rpl30 (ENSDARG00000035871)	laptm4b (ENSDARG00000035870)	mtdha (ENSDARG00000014159)	rrm2b (ENSDARG00000033367)	azin1b (ENSDARG00000035869)	atp6v1c1b (ENSDARG00000035880)	spire1a (ENSDARG00000035868)	klhl38a (ENSDARG00000031383)	fam91a1 (ENSDARG00000003320)	lratd2a (ENSDARG00000032859)	ENSDARG00000110963	cibar1 (ENSDARG00000004436) #19	nkd3l (ENSDARG00000070419)	triqk (ENSDARG00000076296) #21	runx1t1 (ENSDARG00000003680) #22	ENSDARG00000088316	otud6b (ENSDARG00000102705) #25	pex1 (ENSDARG00000098904)	elmo1 (ENSDARG00000098753)	rp9 (ENSDARG00000098942)	si:dkey-184p18.2 (ENSDARG00000077407)	poc1bl (ENSDARG00000012745)	GALNT12 (ENSDARG00000055490)	ENSDARG00000093432	gabbr2 (ENSDARG00000061042)	elp2 (ENSDARG00000017199)	abitram (ENSDARG00000070407)	ctnnal1 (ENSDARG00000018162)	sla1a (ENSDARG00000054340)	ccn4a (ENSDARG00000054331)
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	125	ENSGT00940000158703.k.a	ENSGT00940000164643	ENSGT00390000012138.a.b.a.b	ENSGT00940000153446.a.a.w.b	ENSGT00390000013305.a.b	ENSGT00940000156357.i	ENSGT00950000182995.e.b.`b.b	ENSGT00390000004263.a.c	ENSGT01030000234787	ENSGT00390000003058.b.a.a.a.a.h	ENSGT00390000009543	ENSGT00940000159198.g	ENSGT00950000182986.a.b.b.p	ENSGT00390000010285.c #19	ENSGT00390000017350 #21	ENSGT00950000183176.b.f.q #22	ENSGT00390000012840 #25	ENSGT00390000003680.b #26	ENSGT00950000183131.b.a #28	ENSGT00390000007813 #29	ENSGT00390000014242.k	ENSGT00390000013934	ENSGT00940000153270.a	ENSGT00940000153717.a.a	ENSGT00940000165898	ENSGT01030000234597.a.b.b.e.b	ENSGT00940000157068.c	ENSGT00940000157988	ENSGT00940000177780	ENSGT00940000155294	ENSGT00940000156172.b.g
Asian bonytongue	MODERN SPECIES	15	rnf19a (ENSSFOG00015002817)	polr2k (ENSSFOG00015002881)	ENSSFOG00015002915	laptm4b (ENSSFOG00015002941)	rrm2b (ENSSFOG00015003011)	ubr5 (ENSSFOG00015003412)	azin1b (ENSSFOG00015024619)	ATP6V1C1 (ENSSFOG00015003611)	ENSSFOG00015025967	spire1a (ENSSFOG00015003705)	fam91a1 (ENSSFOG00015003774)	lratd2a (ENSSFOG00015003839)	TRIB1 (ENSSFOG00015031328)	cibar1 (ENSSFOG00015027836) #19	ENSSFOG00015032945	runx1t1 (ENSSFOG00015028800) #22	otud6b (ENSSFOG00015004026) #25	pip4p2 (ENSSFOG00015004078) #26	necab1 (ENSSFOG00015004115) #28	tmem64 (ENSSFOG00015028750) #29	tdp2b (ENSSFOG00015004205)	acot13 (ENSSFOG00015029561)	gmnn (ENSSFOG00015004268)	ripor2 (ENSSFOG00015032585)	si:dkeyp-120h9.1 (ENSSFOG00015004352)	stmn2b (ENSSFOG00015004389)	hey1 (ENSSFOG00015032655)	zbtb10 (ENSSFOG00015004439)	tpd52 (ENSSFOG00015029380)	znf704 (ENSSFOG00015004504)	ENSSFOG00015004535
P. kingsleyae	MODERN SPECIES	179	grhl2b (ENSPKIG00000005564)	ENSPKIG00000005650	pabpc1b (ENSPKIG00000005676)	rnf19a (ENSPKIG00000005740)	ENSPKIG00000005853	rida (ENSPKIG00000005859)	RPL30 (ENSPKIG00000005873)	rrm2b (ENSPKIG00000005888)	ubr5 (ENSPKIG00000005940)	spire1a (ENSPKIG00000006040)	fam91a1 (ENSPKIG00000006126)	lratd2a (ENSPKIG00000006223)	ENSPKIG00000006246	cibar1 (ENSPKIG00000006256) #19	triqk (ENSPKIG00000006290) #21	runx1t1 (ENSPKIG00000006328) #22	otud6b (ENSPKIG00000006367) #25	pip4p2 (ENSPKIG00000006388) #26	necab1 (ENSPKIG00000006434) #28	tmem64 (ENSPKIG00000006469) #29	tdp2b (ENSPKIG00000006483)	acot13 (ENSPKIG00000006508)	gmnn (ENSPKIG00000006536)	ripor2 (ENSPKIG00000006575)	si:dkeyp-120h9.1 (ENSPKIG00000006728)	ENSPKIG00000006774	hey1 (ENSPKIG00000006815)	zbtb10 (ENSPKIG00000006844)	ENSPKIG00000006857	tpd52 (ENSPKIG00000006872)	ENSPKIG00000006896
Osteoglossiformes	ANCESTRAL SPECIES	8	ENSGT00530000063576.B.b	ENSGT00970000193711	ENSGT00940000162507.A	ENSGT00440000033589.d.a	ENSGT00390000017432	ENSGT00950000183170.b.a	ENSGT00940000161608	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000154022.a.b	ENSGT00390000011619	ENSGT00940000158454	ENSGT00940000165573	ENSGT00940000166273	ENSGT00940000158322.i #17	ENSGT00950000183176.b.f.r #22	ENSGT01030000235080	ENSGT00940000157781	ENSGT00390000008115	ENSGT00940000157068.d	ENSGT00940000156172.b.h	ENSGT00940000164547.a	ENSGT00390000007346.a	ENSGT00390000005939.a.a.a.f	ENSGT00940000156595	ENSGT00940000156206.d	ENSGT00940000156479.a	ENSGT00940000159220.c	ENSGT00940000162740	ENSGT00390000011362	ENSGT00940000156658
P. kingsleyae	MODERN SPECIES	204	si:ch211-269k10.5 (ENSPKIG00000019714)	PTDSS1 (ENSPKIG00000019663)	PLEKHG4B (ENSPKIG00000019567)	NKD2 (ENSPKIG00000019524)	trip13 (ENSPKIG00000019468)	brd9 (ENSPKIG00000019374)	ZDHHC11 (ENSPKIG00000019317)	TPPP (ENSPKIG00000019267)	cep72 (ENSPKIG00000019222)	ENSPKIG00000019166	ccdc12 (ENSPKIG00000019130)	NBEAL2 (ENSPKIG00000018965)	ENSPKIG00000018908	ENSPKIG00000018775	rbm12bb (ENSPKIG00000018719) #17	ENSPKIG00000018692 #22	ENSPKIG00000018645	upp1 (ENSPKIG00000018600)	zgc:111986 (ENSPKIG00000018571)	stmn2a (ENSPKIG00000018549)	HEY1 (ENSPKIG00000018533)	znf704 (ENSPKIG00000018510)	ENSPKIG00000018426	ENSPKIG00000018400	ENSPKIG00000018376	fam8a1b (ENSPKIG00000018357)	ATXN1 (ENSPKIG00000018323)	GMPR (ENSPKIG00000018264)	mylipa (ENSPKIG00000018221)	dtnbp1a (ENSPKIG00000018159)	JARID2 (ENSPKIG00000017990)
Asian bonytongue	MODERN SPECIES	9	PTDSS1 (ENSSFOG00015000952)	si:ch211-269k10.5 (ENSSFOG00015001023)	PLEKHG4B (ENSSFOG00015001043)	NKD2 (ENSSFOG00015001063)	trip13 (ENSSFOG00015001080)	brd9 (ENSSFOG00015001130)	ZDHHC11 (ENSSFOG00015001207)	TPPP (ENSSFOG00015001225)	cep72 (ENSSFOG00015001247)	ENSSFOG00015001276	ccdc12 (ENSSFOG00015001307)	NBEAL2 (ENSSFOG00015001329)	ENSSFOG00015001562	ENSSFOG00015001566	rbm12bb (ENSSFOG00015001584) #17	ENSSFOG00015031423 #22	ENSSFOG00015025163	upp1 (ENSSFOG00015001624)	zgc:111986 (ENSSFOG00015001630)	ENSSFOG00015001651	HEY1 (ENSSFOG00015033124)	ENSSFOG00015022449	fabp4a (ENSSFOG00015000142)	fam8a1b (ENSSFOG00015030243)	ATXN1 (ENSSFOG00015000179)	GMPR (ENSSFOG00015000187)	MYLIP (ENSSFOG00015000251)	dtnbp1a (ENSSFOG00015000295)	JARID2 (ENSSFOG00015000354)	zgc:136493 (ENSSFOG00015000400)	rbfa (ENSSFOG00015000446)
Spotted gar	MODERN SPECIES	649	lratd2a (ENSLOCG00000018342)	TRIB1 (ENSLOCG00000010029)	NSMCE2 (ENSLOCG00000010034)	washc5 (ENSLOCG00000010046)	ENSLOCG00000010059	VIRMA (ENSLOCG00000010076) #10	ENSLOCG00000010092	RAD54B (ENSLOCG00000010100) #11	gem (ENSLOCG00000010118) #12	cdh17 (ENSLOCG00000010121) #13	pdp1 (ENSLOCG00000018343) #15	TMEM67 (ENSLOCG00000010134) #16	rbm12bb (ENSLOCG00000018344) #17	cibar1 (ENSLOCG00000010142) #19	triqk (ENSLOCG00000010149) #21	runx1t1 (ENSLOCG00000010158) #22	ENSLOCG00000010170	otud6b (ENSLOCG00000010181) #25	pip4p2 (ENSLOCG00000010191) #26	necab1 (ENSLOCG00000010199) #28	tmem64 (ENSLOCG00000010212) #29	upp1 (ENSLOCG00000010218)	pnp4b (ENSLOCG00000010235)	CALB1 (ENSLOCG00000010243) #30	decr1 (ENSLOCG00000010263) #31	nbn (ENSLOCG00000010276) #32	OSGIN2 (ENSLOCG00000010290) #33	CFAP69 (ENSLOCG00000010300)	ENSLOCG00000018345	gtpbp10 (ENSLOCG00000010313)	ADAM22 (ENSLOCG00000010320)
Elephant shark	MODERN SPECIES	1584	nudcd1 (ENSCMIG00000012977)	trhrb (ENSCMIG00000012986)	TMEM74 (ENSCMIG00000012994)	emc2 (ENSCMIG00000012998)	eif3e (ENSCMIG00000013017)	RSPO2 (ENSCMIG00000013028)	angpt1 (ENSCMIG00000013033)	zfpm2a (ENSCMIG00000013052)	ENSCMIG00000013056	oxr1b (ENSCMIG00000013085)	ABRA (ENSCMIG00000013169)	TMEM67 (ENSCMIG00000013182) #16	rbm12bb (ENSCMIG00000013216) #17	cibar1 (ENSCMIG00000013219) #19	TRIQK (ENSCMIG00000013222) #21	runx1t1 (ENSCMIG00000013255) #22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00950000183176.b.e ##22
Elephant shark	MODERN SPECIES	1708	NRSN2 (ENSCMIG00000003280)	trib3 (ENSCMIG00000003274)	maf1a (ENSCMIG00000003267)	RBCK1 (ENSCMIG00000003256)	tbc1d20 (ENSCMIG00000003242)	CSNK2A1 (ENSCMIG00000003113)	tcf15 (ENSCMIG00000003073)	SRXN1 (ENSCMIG00000003072)	ENSCMIG00000003071	scrt2 (ENSCMIG00000003070)	samhd1 (ENSCMIG00000003068)	gss (ENSCMIG00000003060)	itcha (ENSCMIG00000001505)	dynlrb1 (ENSCMIG00000001068)	ENSCMIG00000001060	CBFA2T3 (ENSCMIG00000001029) ##22	ENSCMIG00000001010	ENSCMIG00000001008 ##28	ENSCMIG00000001003 #28	E2F1 (ENSCMIG00000000998)	ENSCMIG00000000983	hm13 (ENSCMIG00000000838)	arhgap46a (ENSCMIG00000000732)
Euteleostomi	ANCESTRAL SPECIES	165						ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000164556	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290
Sarcopterygii	ANCESTRAL SPECIES	27	ENSGT00390000015057	ENSGT00960000187029	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000164556	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000166375	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Coelacanth	MODERN SPECIES	1952																CBFA2T3 (ENSLACG00000003682) ##22
Tetrapoda	ANCESTRAL SPECIES	16	ENSGT00390000015057	ENSGT00960000187029	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000164556	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00940000166375	ENSGT00730000111190	ENSGT01100000263484.B.a
Anura	ANCESTRAL SPECIES	59	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00960000187029	ENSGT00530000063956.b.a	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00550000074901	ENSGT00390000005075	ENSGT01010000229522	ENSGT00390000008295.a	ENSGT00940000159573	ENSGT00940000160432
Frog	MODERN SPECIES	4	spata2l (ENSXETG00000046155)	chmp1a (ENSXETG00000019844)	dpep1 (ENSXETG00000019843)	ENSXETG00000019839	ENSXETG00000041350	cpne7 (ENSXETG00000019836)	rpl13 (ENSXETG00000019835)	ENSXETG00000048138	ENSXETG00000048579	spg7 (ENSXETG00000019834)	ankrd11 (ENSXETG00000011277)	slc22a31 (ENSXETG00000011276)	ENSXETG00000038947	cdh15 (ENSXETG00000011269)	acsf3 (ENSXETG00000011261)	cbfa2t3 (ENSXETG00000011259) ##22	pabpn1l (ENSXETG00000011258)	trappc2l (ENSXETG00000027081)	galns (ENSXETG00000011256)	aprt (ENSXETG00000027084)	cdt1 (ENSXETG00000011255)	piezo1 (ENSXETG00000011253)	ctu2 (ENSXETG00000011252)	rnf166 (ENSXETG00000011251)	snai3 (ENSXETG00000041190)	nae1 (ENSXETG00000011245)	terb1 (ENSXETG00000033662)	XB5768883 [provisional] (ENSXETG00000027090)	dync1li2 (ENSXETG00000011236)	cmtm4 (ENSXETG00000048250)	cmtm3 (ENSXETG00000011231)
Leishan spiny toad	MODERN SPECIES	1	ENSLLEG00000015567	HSDL1 (ENSLLEG00000015384)	ENSLLEG00000015328	ENSLLEG00000015284	CMIP (ENSLLEG00000014012)	GAN (ENSLLEG00000013717)	BCO1 (ENSLLEG00000013530)	PKD1L2 (ENSLLEG00000013267)	ENSLLEG00000013223	ENSLLEG00000013205	ENSLLEG00000013129	ATMIN (ENSLLEG00000013064)	SLC22A31 (ENSLLEG00000012833)	CDH15 (ENSLLEG00000012694)	ACSF3 (ENSLLEG00000012437)	CBFA2T3 (ENSLLEG00000012214) ##22	PABPN1L (ENSLLEG00000012152)	TRAPPC2L (ENSLLEG00000012102)	GALNS (ENSLLEG00000011328)	APRT (ENSLLEG00000010959)	CDT1 (ENSLLEG00000010745)	ENSLLEG00000010511	RNF166 (ENSLLEG00000010400)	SNAI3 (ENSLLEG00000010336)	NAE1 (ENSLLEG00000010124)	TERB1 (ENSLLEG00000010002)	ENSLLEG00000009978	DYNC1LI2 (ENSLLEG00000009317)	CMTM4 (ENSLLEG00000009231)	CMTM3 (ENSLLEG00000009113)	ENSLLEG00000009082
Amniota	ANCESTRAL SPECIES	25	ENSGT00390000015057	ENSGT00960000187029	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00980000200525	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Sauria	ANCESTRAL SPECIES	14	ENSGT00960000187029	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000186123	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00980000200525	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Archelosauria	ANCESTRAL SPECIES	16	ENSGT00390000015057	ENSGT01030000234925	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000186123	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00390000018596.A.a.a
Archosauria	ANCESTRAL SPECIES	14	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000186123	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00390000018596.A.a.a
Aves	ANCESTRAL SPECIES	22	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000186123	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00390000018596.A.a.a	ENSGT00530000063823.b.a
Neognathae	ANCESTRAL SPECIES	13	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00390000018596.A.a.a.r	ENSGT00530000063823.b.a
Neognathae_b	ANCESTRAL SPECIES	15	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00390000018596.A.a.a.r	ENSGT00530000063823.b.a
Neognathae_c	ANCESTRAL SPECIES	18	ENSGT00390000007852	ENSGT00940000158841.b	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000.h	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00390000018596.A.a.a.r	ENSGT00530000063823.b.a	ENSGT00530000065415
Golden eagle	MODERN SPECIES	25	ENSACCG00020000553	ENSACCG00020000598	VPS9D1 (ENSACCG00020000628)	SPATA2L (ENSACCG00020000663)	CDK10 (ENSACCG00020000691)	CHMP1A (ENSACCG00020000735)	DPEP1 (ENSACCG00020000768)	ENSACCG00020000807	CPNE7 (ENSACCG00020000841)	RPL13 (ENSACCG00020000873)	SPG7 (ENSACCG00020001490)	ANKRD11 (ENSACCG00020002114)	SLC22A31 (ENSACCG00020002138)	CDH15 (ENSACCG00020002245)	ACSF3 (ENSACCG00020002335)	CBFA2T3 (ENSACCG00020002396) ##22	PABPN1L (ENSACCG00020002453)	TRAPPC2L (ENSACCG00020002461)	GALNS (ENSACCG00020002477)	APRT (ENSACCG00020002510)	CDT1 (ENSACCG00020002531)	CTU2 (ENSACCG00020002823)	RNF166 (ENSACCG00020002844)	SNAI3 (ENSACCG00020002858)	MVD (ENSACCG00020002872)	CYBA (ENSACCG00020002886)	IL17C (ENSACCG00020002897)	ZC3H18 (ENSACCG00020002926)	CIDEC (ENSACCG00020002959)	ZFPM1 (ENSACCG00020002985)	ENSACCG00020003008
Kakapo	MODERN SPECIES	19	SPIRE2 (ENSSHBG00005010156)	FANCA (ENSSHBG00005010193)	ENSSHBG00005010221	SPATA2L (ENSSHBG00005010256)	CDK10 (ENSSHBG00005010277)	CHMP1A (ENSSHBG00005010303)	DPEP1 (ENSSHBG00005010324)	ENSSHBG00005010347	ENSSHBG00005010385	ENSSHBG00005010484	ENSSHBG00005010521	ENSSHBG00005010556	ENSSHBG00005010598	ENSSHBG00005010672	ENSSHBG00005010978	CBFA2T3 (ENSSHBG00005011017) ##22	TRAPPC2L (ENSSHBG00005011050)	GALNS (ENSSHBG00005011075)	APRT (ENSSHBG00005011101)	CDT1 (ENSSHBG00005011129)	CTU2 (ENSSHBG00005011163)	RNF166 (ENSSHBG00005011186)	MVD (ENSSHBG00005011204)	CYBA (ENSSHBG00005011230)	IL17C (ENSSHBG00005011247)	ZC3H18 (ENSSHBG00005011264)	CIDEC (ENSSHBG00005011286)	ENSSHBG00005011302	ENSSHBG00005011325	ENSSHBG00005011347	ENSSHBG00005011371
Passeriformes	ANCESTRAL SPECIES	13	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00390000018596.A.a.a.r	ENSGT00530000063823.b.a	ENSGT00530000065415
Great tit	MODERN SPECIES	2	ZNF276 (ENSPMJG00000013794)	VPS9D1 (ENSPMJG00000013795)	SPATA2L (ENSPMJG00000013798)	CDK10 (ENSPMJG00000013800)	CHMP1A (ENSPMJG00000013810)	DPEP1 (ENSPMJG00000013811)	ENSPMJG00000013812	CPNE7 (ENSPMJG00000013813)	RPL13 (ENSPMJG00000013816)	SPG7 (ENSPMJG00000013819)	ANKRD11 (ENSPMJG00000013821)	ACSF3 (ENSPMJG00000013822)	SLC22A31 (ENSPMJG00000013823)	CDH15 (ENSPMJG00000013825)	ENSPMJG00000013831	CBFA2T3 (ENSPMJG00000013833) ##22	PABPN1L (ENSPMJG00000013834)	TRAPPC2L (ENSPMJG00000013835)	GALNS (ENSPMJG00000013838)	APRT (ENSPMJG00000013839)	CDT1 (ENSPMJG00000013840)	PIEZO1 (ENSPMJG00000013841)	CTU2 (ENSPMJG00000013847)	RNF166 (ENSPMJG00000013848)	MVD (ENSPMJG00000013849)	CYBA (ENSPMJG00000013850)	IL17C (ENSPMJG00000013851)	ZC3H18 (ENSPMJG00000013852)	CIDEC (ENSPMJG00000013875)	ZFPM1 (ENSPMJG00000013878)	ZNF469 (ENSPMJG00000013879)
Passeriformes_d	ANCESTRAL SPECIES	13	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00390000018596.A.a.a.r	ENSGT00530000063823.b.a	ENSGT00530000065415	ENSGT00390000011116
Flycatcher	MODERN SPECIES	2	FANCA (ENSFALG00000003051)	ZNF276 (ENSFALG00000003070)	VPS9D1 (ENSFALG00000022975)	SPATA2L (ENSFALG00000003112)	CDK10 (ENSFALG00000003089)	CHMP1A (ENSFALG00000003120)	DPEP1 (ENSFALG00000003138)	ENSFALG00000003150	CPNE7 (ENSFALG00000003159)	RPL13 (ENSFALG00000003173)	SPG7 (ENSFALG00000003193)	ANKRD11 (ENSFALG00000003207)	SLC22A31 (ENSFALG00000003222)	CDH15 (ENSFALG00000003235)	ACSF3 (ENSFALG00000003262)	CBFA2T3 (ENSFALG00000003291) ##22	PABPN1L (ENSFALG00000003319)	TRAPPC2L (ENSFALG00000003339)	GALNS (ENSFALG00000003353)	APRT (ENSFALG00000028372)	CDT1 (ENSFALG00000003381)	RNF166 (ENSFALG00000003485)	MVD (ENSFALG00000003493)	CYBA (ENSFALG00000003496)	IL17C (ENSFALG00000003501)	ZC3H18 (ENSFALG00000006471)	ENSFALG00000006487	ENSFALG00000024837	ENSFALG00000027460	BANP (ENSFALG00000006505)	ENSFALG00000006527
Passeriformes_g	ANCESTRAL SPECIES	17	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00390000018596.A.a.a.r	ENSGT00530000063823.b.a	ENSGT00530000065415	ENSGT00390000011116
Medium ground finch	DUPLICATION
Medium ground finch	MODERN SPECIES	76	DEF8 (ENSGFOG00000005196)	ENSGFOG00000005182	MC1R (ENSGFOG00000005172)	TCF25 (ENSGFOG00000005151)	SPIRE2 (ENSGFOG00000005126)	FANCA (ENSGFOG00000005012)	ZNF276 (ENSGFOG00000004964)	CDK10 (ENSGFOG00000004922)	CHMP1A (ENSGFOG00000004907)	ENSGFOG00000004867	RPL13 (ENSGFOG00000004794)	SPG7 (ENSGFOG00000004756)	ANKRD11 (ENSGFOG00000004732)	ACSF3 (ENSGFOG00000004695)	ENSGFOG00000004675 ##22	ENSGFOG00000004668 ##22	PABPN1L (ENSGFOG00000004646)	TRAPPC2L (ENSGFOG00000004629)	GALNS (ENSGFOG00000004588)	APRT (ENSGFOG00000004563)	CDT1 (ENSGFOG00000004538)	CTU2 (ENSGFOG00000004243)	RNF166 (ENSGFOG00000004228)	MVD (ENSGFOG00000004198)	CYBA (ENSGFOG00000004191)	ENSGFOG00000004188	CIDEC (ENSGFOG00000004180)	BANP (ENSGFOG00000004170)	CA5B (ENSGFOG00000004148)	SLC7A5 (ENSGFOG00000004114)	KLHDC4 (ENSGFOG00000004090)
Medium ground finch	MODERN SPECIES	76	GAS8 (ENSGFOG00000005208)	DEF8 (ENSGFOG00000005196)	ENSGFOG00000005182	MC1R (ENSGFOG00000005172)	TCF25 (ENSGFOG00000005151)	SPIRE2 (ENSGFOG00000005126)	FANCA (ENSGFOG00000005012)	ZNF276 (ENSGFOG00000004964)	CDK10 (ENSGFOG00000004922)	CHMP1A (ENSGFOG00000004907)	ENSGFOG00000004867	RPL13 (ENSGFOG00000004794)	SPG7 (ENSGFOG00000004756)	ANKRD11 (ENSGFOG00000004732)	ACSF3 (ENSGFOG00000004695)	ENSGFOG00000004675 ##22	ENSGFOG00000004668 ##22	PABPN1L (ENSGFOG00000004646)	TRAPPC2L (ENSGFOG00000004629)	GALNS (ENSGFOG00000004588)	APRT (ENSGFOG00000004563)	CDT1 (ENSGFOG00000004538)	CTU2 (ENSGFOG00000004243)	RNF166 (ENSGFOG00000004228)	MVD (ENSGFOG00000004198)	CYBA (ENSGFOG00000004191)	ENSGFOG00000004188	CIDEC (ENSGFOG00000004180)	BANP (ENSGFOG00000004170)	CA5B (ENSGFOG00000004148)	SLC7A5 (ENSGFOG00000004114)
Passeroidea	ANCESTRAL SPECIES	17	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00390000018596.A.a.a.r	ENSGT00530000063823.b.a	ENSGT00530000065415	ENSGT00390000011116
Common canary	MODERN SPECIES	14	SPIRE2 (ENSSCAG00000008225)	FANCA (ENSSCAG00000008192)	ZNF276 (ENSSCAG00000008165)	VPS9D1 (ENSSCAG00000008157)	SPATA2L (ENSSCAG00000008147)	CDK10 (ENSSCAG00000008021)	CHMP1A (ENSSCAG00000008003)	DPEP1 (ENSSCAG00000007983)	ENSSCAG00000007731	RPL13 (ENSSCAG00000007620)	SPG7 (ENSSCAG00000007369)	ANKRD11 (ENSSCAG00000007324)	SLC22A31 (ENSSCAG00000007315)	CDH15 (ENSSCAG00000007301)	ACSF3 (ENSSCAG00000007285)	CBFA2T3 (ENSSCAG00000007278) ##22	PABPN1L (ENSSCAG00000007261)	TRAPPC2L (ENSSCAG00000007254)	GALNS (ENSSCAG00000007244)	APRT (ENSSCAG00000007236)	CDT1 (ENSSCAG00000007231)	CTU2 (ENSSCAG00000007061)	RNF166 (ENSSCAG00000007060)	MVD (ENSSCAG00000007057)	CYBA (ENSSCAG00000007052)	IL17C (ENSSCAG00000007049)	ENSSCAG00000007045	CIDEC (ENSSCAG00000007041)	ZFPM1 (ENSSCAG00000007040)	BANP (ENSSCAG00000007031)	CA5B (ENSSCAG00000007027)
Zebra finch	MODERN SPECIES	2	FANCA (ENSTGUG00000007970)	ZNF276 (ENSTGUG00000007961)	VPS9D1 (ENSTGUG00000029560)	SPATA2L (ENSTGUG00000018880)	CDK10 (ENSTGUG00000007915)	CHMP1A (ENSTGUG00000007901)	DPEP1 (ENSTGUG00000007893)	ENSTGUG00000022293	CPNE7 (ENSTGUG00000021827)	RPL13 (ENSTGUG00000007874)	SPG7 (ENSTGUG00000007843)	ANKRD11 (ENSTGUG00000027323)	SLC22A31 (ENSTGUG00000028328)	ACSF3 (ENSTGUG00000007811)	ENSTGUG00000021287	CBFA2T3 (ENSTGUG00000007782) ##22	PABPN1L (ENSTGUG00000023785)	TRAPPC2L (ENSTGUG00000022026)	GALNS (ENSTGUG00000007758)	APRT (ENSTGUG00000007746)	CDT1 (ENSTGUG00000007741)	ENSTGUG00000029764	RNF166 (ENSTGUG00000007729)	ENSTGUG00000007724	IL17C (ENSTGUG00000007718)	ZC3H18 (ENSTGUG00000007717)	ENSTGUG00000007712	ZFPM1 (ENSTGUG00000023942)	ENSTGUG00000029627	BANP (ENSTGUG00000007690)	CA5B (ENSTGUG00000007678)
Galloanserae	ANCESTRAL SPECIES	12	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00390000018596.A.a.a.r	ENSGT00530000063823.b.a	ENSGT00530000065415
Anatidae	ANCESTRAL SPECIES	17	ENSGT00390000003058.b.a.b	ENSGT00390000007852.c	ENSGT00940000158841	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442.s.b	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00950000182909.b.b.b	ENSGT00940000157348	ENSGT00390000008797	ENSGT00390000015359	ENSGT00940000161887	ENSGT00730000111190	ENSGT00390000018596.A.a.a.r	ENSGT00530000063823.b.a	ENSGT00530000065415	ENSGT00390000011116
Duck	MODERN SPECIES	1527																CBFA2T3 (ENSAPLG00000018441) ##22
Pink-footed goose	MODERN SPECIES	125	VPS9D1 (ENSABRG00000002042)	CDK10 (ENSABRG00000000380)	CHMP1A (ENSABRG00000000311)	DPEP1 (ENSABRG00000000270)	ENSABRG00000000116	CPNE7 (ENSABRG00000000092)	RPL13 (ENSABRG00000000089)	SPG7 (ENSABRG00000000073)	ANKRD11 (ENSABRG00000000065)	SLC22A31 (ENSABRG00000000055)	CDH15 (ENSABRG00000000025)	ACSF3 (ENSABRG00000000020)	PABPN1L (ENSABRG00000000012)	TRAPPC2L (ENSABRG00000021602)	GALNS (ENSABRG00000021594)	CBFA2T3 (ENSABRG00000021590) ##22	APRT (ENSABRG00000021588)	CDT1 (ENSABRG00000021584)	PIEZO1 (ENSABRG00000021559)	RNF166 (ENSABRG00000021553)	CTU2 (ENSABRG00000021547)	MVD (ENSABRG00000021544)	IL17C (ENSABRG00000021541)	ENSABRG00000021539	ZC3H18 (ENSABRG00000021533)	CIDEC (ENSABRG00000021529)	ZFPM1 (ENSABRG00000021528)	ZNF469 (ENSABRG00000021527)	BANP (ENSABRG00000021520)	CA5B (ENSABRG00000021515)	SLC7A5 (ENSABRG00000021512)
Phasianidae	ANCESTRAL SPECIES	12	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00390000018596.A.a.a.r	ENSGT00530000063823.b.a	ENSGT00530000065415
Japanese quail	MODERN SPECIES	2	FANCA (ENSCJPG00005015064)	ZNF276 (ENSCJPG00005015063)	VPS9D1 (ENSCJPG00005015062)	SPATA2L (ENSCJPG00005015061)	CDK10 (ENSCJPG00005015060)	CHMP1A (ENSCJPG00005015059)	DPEP1 (ENSCJPG00005015058)	ENSCJPG00005015057	CPNE7 (ENSCJPG00005015056)	RPL13 (ENSCJPG00005015054)	SPG7 (ENSCJPG00005015053)	ANKRD11 (ENSCJPG00005015051)	SLC22A31 (ENSCJPG00005015050)	CDH15 (ENSCJPG00005015049)	ACSF3 (ENSCJPG00005015048)	CBFA2T3 (ENSCJPG00005015032) ##22	PABPN1L (ENSCJPG00005015031)	TRAPPC2L (ENSCJPG00005015030)	GALNS (ENSCJPG00005015012)	APRT (ENSCJPG00005015010)	ENSCJPG00005015009	CDT1 (ENSCJPG00005015007)	CTU2 (ENSCJPG00005014999)	RNF166 (ENSCJPG00005014998)	MVD (ENSCJPG00005014997)	CYBA (ENSCJPG00005014996)	IL17C (ENSCJPG00005014995)	ZC3H18 (ENSCJPG00005014938)	CIDEC (ENSCJPG00005014937)	ZFPM1 (ENSCJPG00005014936)	ENSCJPG00005014935
Phasianidae_b	ANCESTRAL SPECIES	14	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00390000018596.A.a.a.r	ENSGT00530000063823.b.a	ENSGT00530000065415
Chicken	MODERN SPECIES	2	SPIRE2 (ENSGALG00010008092)	FANCA (ENSGALG00010008083)	ZNF276 (ENSGALG00010008073)	VPS9D1 (ENSGALG00010008062)	CDK10 (ENSGALG00010008050)	CHMP1A (ENSGALG00010008039)	DPEP1 (ENSGALG00010008034)	ENSGALG00010008013	CPNE7 (ENSGALG00010008006)	RPL13 (ENSGALG00010007998)	SPG7 (ENSGALG00010007989)	ANKRD11 (ENSGALG00010007975)	SLC22A31 (ENSGALG00010007968)	CDH15 (ENSGALG00010007957)	ACSF3 (ENSGALG00010007944)	CBFA2T3 (ENSGALG00010007930) ##22	PABPN1L (ENSGALG00010007913)	TRAPPC2L (ENSGALG00010007912)	GALNS (ENSGALG00010007909)	APRT (ENSGALG00010007899)	CDT1 (ENSGALG00010007887)	PIEZO1 (ENSGALG00010008514)	CTU2 (ENSGALG00010008486)	RNF166 (ENSGALG00010008476)	MVD (ENSGALG00010009646)	CYBA (ENSGALG00010009637)	IL17C (ENSGALG00010009627)	ZC3H18 (ENSGALG00010009569)	CIDEC (ENSGALG00010009557)	ENSGALG00010009815	ZFPM1 (ENSGALG00010009511)
Turkey	DUPLICATION
Turkey	MODERN SPECIES	4	ENSMGAG00000021464	ENSMGAG00000007624	ENSMGAG00000019295	ENSMGAG00000007832	ENSMGAG00000007845	ENSMGAG00000007878	RNF166 (ENSMGAG00000007804)	ENSMGAG00000007721	ENSMGAG00000007782	CDT1 (ENSMGAG00000007702)	APRT (ENSMGAG00000007692)	PABPN1L (ENSMGAG00000007655)	ENSMGAG00000017404	ENSMGAG00000007660	ENSMGAG00000018527 ##22	ENSMGAG00000017375 ##22	ENSMGAG00000007880	ENSMGAG00000020935	ENSMGAG00000007898	ENSMGAG00000008007	ENSMGAG00000008062	ENSMGAG00000008042	ENSMGAG00000008027	SPATA2L (ENSMGAG00000008173)	CDK10 (ENSMGAG00000008128)	CHMP1A (ENSMGAG00000008105)	DPEP1 (ENSMGAG00000008081)	ENSMGAG00000008195	ENSMGAG00000008218	SPIRE2 (ENSMGAG00000008320)	ENSMGAG00000016832
Turkey	MODERN SPECIES	4	ENSMGAG00000007612	ENSMGAG00000021464	ENSMGAG00000007624	ENSMGAG00000019295	ENSMGAG00000007832	ENSMGAG00000007845	ENSMGAG00000007878	RNF166 (ENSMGAG00000007804)	ENSMGAG00000007721	ENSMGAG00000007782	CDT1 (ENSMGAG00000007702)	APRT (ENSMGAG00000007692)	PABPN1L (ENSMGAG00000007655)	ENSMGAG00000017404	ENSMGAG00000007660	ENSMGAG00000018527 ##22	ENSMGAG00000017375 ##22	ENSMGAG00000007880	ENSMGAG00000020935	ENSMGAG00000007898	ENSMGAG00000008007	ENSMGAG00000008062	ENSMGAG00000008042	ENSMGAG00000008027	SPATA2L (ENSMGAG00000008173)	CDK10 (ENSMGAG00000008128)	CHMP1A (ENSMGAG00000008105)	DPEP1 (ENSMGAG00000008081)	ENSMGAG00000008195	ENSMGAG00000008218	SPIRE2 (ENSMGAG00000008320)
Australian saltwater crocodile	MODERN SPECIES	35	TCF25 (ENSCPRG00005007965)	SPIRE2 (ENSCPRG00005007950)	FANCA (ENSCPRG00005007925)	ZNF276 (ENSCPRG00005007917)	VPS9D1 (ENSCPRG00005007862)	SPATA2L (ENSCPRG00005007857)	CDK10 (ENSCPRG00005007852)	ENSCPRG00005007850	CHMP1A (ENSCPRG00005007842)	DPEP1 (ENSCPRG00005007831)	ENSCPRG00005007793	ANKRD11 (ENSCPRG00005007785)	SLC22A31 (ENSCPRG00005007769)	CDH15 (ENSCPRG00005007751)	ACSF3 (ENSCPRG00005007740)	CBFA2T3 (ENSCPRG00005007731) ##22	PABPN1L (ENSCPRG00005007723)	TRAPPC2L (ENSCPRG00005007718)	GALNS (ENSCPRG00005007702)	APRT (ENSCPRG00005007693)	CDT1 (ENSCPRG00005007690)	PIEZO1 (ENSCPRG00005007114)	CTU2 (ENSCPRG00005007019)	RNF166 (ENSCPRG00005007009)	MVD (ENSCPRG00005006999)	CYBA (ENSCPRG00005006986)	IL17C (ENSCPRG00005006982)	ZC3H18 (ENSCPRG00005006951)	ENSCPRG00005006935	CIDEC (ENSCPRG00005006931)	ZFPM1 (ENSCPRG00005006922)
Cryptodira	ANCESTRAL SPECIES	14	ENSGT00390000015057	ENSGT01030000234925	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000186123	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00390000018596.A.a.a
Chinese turtle	MODERN SPECIES	747															ENSPSIG00000000386	CBFA2T3 (ENSPSIG00000003488) ##22	PABPN1L (ENSPSIG00000003404)	TRAPPC2L (ENSPSIG00000003328)	GALNS (ENSPSIG00000003213)	APRT (ENSPSIG00000003164)	CDT1 (ENSPSIG00000003130)
Testudinoidea	ANCESTRAL SPECIES	13	ENSGT00390000015057	ENSGT01030000234925	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000186123	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887.b	ENSGT00940000161887.a	ENSGT00730000111190	ENSGT01100000263484.B.a
Testudinidae	ANCESTRAL SPECIES	17	ENSGT00390000015057	ENSGT00960000187029	ENSGT00530000063956.b.a	ENSGT00940000158102.e	ENSGT00950000186123	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887.b	ENSGT00940000161887.a	ENSGT00730000111190	ENSGT01100000263484.B.a
Abingdon island giant tortoise	MODERN SPECIES	2466	ZNF276 (ENSCABG00000005569)	VPS9D1 (ENSCABG00000005564)	SPATA2L (ENSCABG00000005562)	ENSCABG00000005559	ENSCABG00000005556	CHMP1A (ENSCABG00000005555)	DPEP1 (ENSCABG00000005551)	ENSCABG00000005524	CPNE7 (ENSCABG00000005488)	RPL13 (ENSCABG00000005483)	SPG7 (ENSCABG00000004070)	ANKRD11 (ENSCABG00000004001)	SLC22A31 (ENSCABG00000003999)	CDH15 (ENSCABG00000003996)	ACSF3 (ENSCABG00000003994)	CBFA2T3 (ENSCABG00000003991) ##22	PABPN1L (ENSCABG00000003987)	TRAPPC2L (ENSCABG00000003983)	GALNS (ENSCABG00000003976)	APRT (ENSCABG00000003974)	CDT1 (ENSCABG00000003970)	PIEZO1 (ENSCABG00000003533)	CTU2 (ENSCABG00000003501)	RNF166 (ENSCABG00000003498)	SNAI3 (ENSCABG00000003494)	MVD (ENSCABG00000003489)	CYBA (ENSCABG00000003485)	IL17C (ENSCABG00000003482)	ZC3H18 (ENSCABG00000003350)	ENSCABG00000003332	CIDEC (ENSCABG00000003320)
Goode s thornscrub tortoise	MODERN SPECIES	3	VPS9D1 (ENSGEVG00005008511)	ENSGEVG00005008493	SPATA2L (ENSGEVG00005008489)	ENSGEVG00005008469	ENSGEVG00005008448	CHMP1A (ENSGEVG00005008430)	DPEP1 (ENSGEVG00005008356)	ENSGEVG00005008308	CPNE7 (ENSGEVG00005008017)	RPL13 (ENSGEVG00005007938)	SPG7 (ENSGEVG00005006825)	ANKRD11 (ENSGEVG00005006503)	SLC22A31 (ENSGEVG00005006467)	CDH15 (ENSGEVG00005006336)	ACSF3 (ENSGEVG00005006298)	CBFA2T3 (ENSGEVG00005006250) ##22	PABPN1L (ENSGEVG00005006215)	TRAPPC2L (ENSGEVG00005006191)	GALNS (ENSGEVG00005006126)	CDT1 (ENSGEVG00005006082)	PIEZO1 (ENSGEVG00005005511)	CTU2 (ENSGEVG00005005353)	RNF166 (ENSGEVG00005005336)	SNAI3 (ENSGEVG00005005312)	MVD (ENSGEVG00005005288)	CYBA (ENSGEVG00005005265)	IL17C (ENSGEVG00005005240)	ENSGEVG00005005213	ZC3H18 (ENSGEVG00005005191)	ENSGEVG00005005124	CIDEC (ENSGEVG00005005042)
Emydidae	ANCESTRAL SPECIES	47	ENSGT00390000015057	ENSGT01030000234925	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000186123.a	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797.k	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887.b	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00390000018596.A.a.a
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	2267	ENSTMTG00000012130	ENSTMTG00000012104	ENSTMTG00000012074	ENSTMTG00000012057	ENSTMTG00000012032	ENSTMTG00000012005	ENSTMTG00000011904	ENSTMTG00000011881	ENSTMTG00000011465	ENSTMTG00000011412	ENSTMTG00000011379	ENSTMTG00000011357	ENSTMTG00000011342	ENSTMTG00000011313	ENSTMTG00000011270	ENSTMTG00000010740 ##22	ENSTMTG00000010537	ENSTMTG00000010499	ENSTMTG00000010466	ENSTMTG00000010450	ENSTMTG00000010423	ENSTMTG00000009221	ENSTMTG00000009063	ENSTMTG00000009046	ENSTMTG00000009034	ENSTMTG00000009001	ENSTMTG00000008987	ENSTMTG00000008978	ENSTMTG00000008966	ENSTMTG00000008929	ENSTMTG00000008914
Three-toed box turtle	MODERN SPECIES	2272	ENSTMTG00000015355	ENSTMTG00000015324	ENSTMTG00000015318	ENSTMTG00000015158	ENSTMTG00000015133	ENSTMTG00000015119	ENSTMTG00000015101	ENSTMTG00000015078	ENSTMTG00000014945	ENSTMTG00000014907	ENSTMTG00000012858	ENSTMTG00000012644	ENSTMTG00000012609	ENSTMTG00000012562	ENSTMTG00000012544	ENSTMTG00000012396 ##22	ENSTMTG00000012298	ENSTMTG00000012275	ENSTMTG00000012249	ENSTMTG00000012234	ENSTMTG00000012206	ENSTMTG00000011027	ENSTMTG00000010792	ENSTMTG00000010773	ENSTMTG00000010754	ENSTMTG00000010709	ENSTMTG00000010692	ENSTMTG00000010674	ENSTMTG00000010649	ENSTMTG00000010595	ENSTMTG00000010531
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	708												ANKRD11 (ENSCPBG00000023386)	SLC22A31 (ENSCPBG00000023394)	CDH15 (ENSCPBG00000023399)	ACSF3 (ENSCPBG00000023427)	CBFA2T3 (ENSCPBG00000023435) ##22	ENSCPBG00000023439 ##22	PABPN1L (ENSCPBG00000023441)	TRAPPC2L (ENSCPBG00000023442)	GALNS (ENSCPBG00000023444)	APRT (ENSCPBG00000023446)	CDT1 (ENSCPBG00000023447)	PIEZO1 (ENSCPBG00000023456)	CTU2 (ENSCPBG00000023471)	RNF166 (ENSCPBG00000023472)	SNAI3 (ENSCPBG00000023474)	ENSCPBG00000023476	MVD (ENSCPBG00000023478)	CYBA (ENSCPBG00000023484)	IL17C (ENSCPBG00000023486)	ZC3H18 (ENSCPBG00000023488)
painted turtle	MODERN SPECIES	708											ANKRD11 (ENSCPBG00000023386)	SLC22A31 (ENSCPBG00000023394)	CDH15 (ENSCPBG00000023399)	ACSF3 (ENSCPBG00000023427)	CBFA2T3 (ENSCPBG00000023435) ##22	ENSCPBG00000023439 ##22	PABPN1L (ENSCPBG00000023441)	TRAPPC2L (ENSCPBG00000023442)	GALNS (ENSCPBG00000023444)	APRT (ENSCPBG00000023446)	CDT1 (ENSCPBG00000023447)	PIEZO1 (ENSCPBG00000023456)	CTU2 (ENSCPBG00000023471)	RNF166 (ENSCPBG00000023472)	SNAI3 (ENSCPBG00000023474)	ENSCPBG00000023476	MVD (ENSCPBG00000023478)	CYBA (ENSCPBG00000023484)	IL17C (ENSCPBG00000023486)	ZC3H18 (ENSCPBG00000023488)	ENSCPBG00000023492
Lepidosauria	ANCESTRAL SPECIES	29	ENSGT00960000187029	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000186123	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00980000200525	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00940000166375	ENSGT00730000111190	ENSGT01100000263484.B.a
tuatara	MODERN SPECIES	59	FANCA (ENSSPUG00000006627)	ENSSPUG00000006692	VPS9D1 (ENSSPUG00000006702)	ENSSPUG00000006735	SPATA2L (ENSSPUG00000006762)	CDK10 (ENSSPUG00000006771)	ENSSPUG00000006787	DPEP1 (ENSSPUG00000006816)	ENSSPUG00000006860	CPNE7 (ENSSPUG00000006873)	RPL13 (ENSSPUG00000006904)	SPG7 (ENSSPUG00000006934)	ENSSPUG00000006959	ENSSPUG00000007001	ACSF3 (ENSSPUG00000007006)	CBFA2T3 (ENSSPUG00000007014) ##22	PABPN1L (ENSSPUG00000007031)	ENSSPUG00000007047	GALNS (ENSSPUG00000007049)	APRT (ENSSPUG00000007056)	CDT1 (ENSSPUG00000007063)	ENSSPUG00000007086	CTU2 (ENSSPUG00000007293)	SNAI3 (ENSSPUG00000007322)	MVD (ENSSPUG00000007336)	CYBA (ENSSPUG00000007346)	IL17C (ENSSPUG00000007358)	ENSSPUG00000007364	ENSSPUG00000007367	ENSSPUG00000007388	ZFPM1 (ENSSPUG00000007519)
Episquamata	ANCESTRAL SPECIES	11	ENSGT00960000187029	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000186123	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00980000200525	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000166375	ENSGT00730000111190	ENSGT00960000190114	ENSGT01100000263484.B.a
Laterata	ANCESTRAL SPECIES	28			ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000186123	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000166375	ENSGT00730000111190	ENSGT00960000190114	ENSGT01100000263484.B.a
Common wall lizard	MODERN SPECIES	16	KIAA0513 (ENSPMRG00000011129)	SPATA2L (ENSPMRG00000011122)	CDK10 (ENSPMRG00000011113)	ENSPMRG00000011110	CHMP1A (ENSPMRG00000011106)	DPEP1 (ENSPMRG00000011102)	ENSPMRG00000011089	CPNE7 (ENSPMRG00000011078)	RPL13 (ENSPMRG00000011066)	SPG7 (ENSPMRG00000011056)	ENSPMRG00000011051	ANKRD11 (ENSPMRG00000011041)	SLC22A31 (ENSPMRG00000011030)	CDH15 (ENSPMRG00000011023)	ACSF3 (ENSPMRG00000011014)	CBFA2T3 (ENSPMRG00000010990) ##22	PABPN1L (ENSPMRG00000010979)	TRAPPC2L (ENSPMRG00000010973)	GALNS (ENSPMRG00000010964)	APRT (ENSPMRG00000010959)	CDT1 (ENSPMRG00000010950)	ENSPMRG00000010945	PIEZO1 (ENSPMRG00000010137)	CTU2 (ENSPMRG00000009965)	RNF166 (ENSPMRG00000009949)	SNAI3 (ENSPMRG00000009942)	MVD (ENSPMRG00000009934)	CYBA (ENSPMRG00000009927)	ENSPMRG00000009923	ZC3H18 (ENSPMRG00000009914)	ENSPMRG00000009908
Argentine black and white tegu	MODERN SPECIES	51	ENSSMRG00000006779	ZFPM1 (ENSSMRG00000006793)	ENSSMRG00000006805	ENSSMRG00000006808	ENSSMRG00000006810	ENSSMRG00000006815	CYBA (ENSSMRG00000006816)	MVD (ENSSMRG00000006817)	SNAI3 (ENSSMRG00000006819)	RNF166 (ENSSMRG00000006820)	CTU2 (ENSSMRG00000006821)	PIEZO1 (ENSSMRG00000006841)	SLC22A31 (ENSSMRG00000006876)	CDH15 (ENSSMRG00000006887)	ACSF3 (ENSSMRG00000006898)	CBFA2T3 (ENSSMRG00000006920) ##22	PABPN1L (ENSSMRG00000006941)	TRAPPC2L (ENSSMRG00000006943)	GALNS (ENSSMRG00000006944)	APRT (ENSSMRG00000006956)	CDT1 (ENSSMRG00000007029)	ANKRD11 (ENSSMRG00000007052)	SPG7 (ENSSMRG00000007056)	RPL13 (ENSSMRG00000007063)	CPNE7 (ENSSMRG00000007068)	ENSSMRG00000007082	ENSSMRG00000007086	DPEP1 (ENSSMRG00000007089)	CHMP1A (ENSSMRG00000007095)	SPATA2L (ENSSMRG00000007100)	ENSSMRG00000007103
Toxicofera	ANCESTRAL SPECIES	16	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000186123	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00980000200525	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000166375	ENSGT00730000111190	ENSGT00960000190114	ENSGT01100000263484.B.a
Lizard	MODERN SPECIES	1099		SPATA2L (ENSACAG00000022713)	CDK10 (ENSACAG00000017200)	ENSACAG00000041996	CHMP1A (ENSACAG00000037286)	DPEP1 (ENSACAG00000017169)	ENSACAG00000017162	ENSACAG00000023270	CPNE7 (ENSACAG00000017091)	RPL13 (ENSACAG00000017072)	SPG7 (ENSACAG00000017044)	ANKRD11 (ENSACAG00000017023)	SLC22A31 (ENSACAG00000017006)	CDH15 (ENSACAG00000016950)	ACSF3 (ENSACAG00000013110)	CBFA2T3 (ENSACAG00000013152) ##22
Elapidae	DUPLICATION
Elapidae	DUPLICATION
Elapidae	ANCESTRAL SPECIES	17	ENSGT00940000158841.e	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00980000200525	ENSGT00940000156329	ENSGT00940000155966.s	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000.l	ENSGT00950000183176.b.e.i.a ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000166375	ENSGT00730000111190	ENSGT00960000190114	ENSGT01100000263484.B.a
Elapidae_a	ANCESTRAL SPECIES	56	ENSGT00940000158841.e	ENSGT00940000158841.f	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966.s	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000.l	ENSGT00950000183176.b.e.i.a ##22	ENSGT00940000161325	ENSGT00940000165912	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000166375	ENSGT00730000111190	ENSGT00960000190114
Acanthophiinae	ANCESTRAL SPECIES	55	ENSGT00990000204549	ENSGT00940000158841.f	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966.s	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000.l	ENSGT00950000183176.b.e.i.a ##22	ENSGT00940000161325	ENSGT00940000165912	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000166375	ENSGT00730000111190	ENSGT00960000190114
Mainland tiger snake	MODERN SPECIES	610															ENSNSUG00000002604	CBFA2T3 (ENSNSUG00000002599) ##22	PABPN1L (ENSNSUG00000002598)	ENSNSUG00000002597	GALNS (ENSNSUG00000002595)	APRT (ENSNSUG00000002594)
Eastern brown snake	MODERN SPECIES	127	ENSPTXG00000010827	ZNF276 (ENSPTXG00000010818)	VPS9D1 (ENSPTXG00000010111)	SPATA2L (ENSPTXG00000010109)	CDK10 (ENSPTXG00000010107)	CHMP1A (ENSPTXG00000010106)	DPEP1 (ENSPTXG00000010105)	ENSPTXG00000010104	CPNE7 (ENSPTXG00000010100)	RPL13 (ENSPTXG00000010096)	SPG7 (ENSPTXG00000010068)	ANKRD11 (ENSPTXG00000010065)	SLC22A31 (ENSPTXG00000010064)	CDH15 (ENSPTXG00000010063)	ACSF3 (ENSPTXG00000010060)	CBFA2T3 (ENSPTXG00000010057) ##22	TRAPPC2L (ENSPTXG00000010055)	GALNS (ENSPTXG00000010054)	APRT (ENSPTXG00000010053)	CDT1 (ENSPTXG00000010052)	PIEZO1 (ENSPTXG00000009662)	CTU2 (ENSPTXG00000009635)	RNF166 (ENSPTXG00000009634)	SNAI3 (ENSPTXG00000009633)	MVD (ENSPTXG00000009632)	CYBA (ENSPTXG00000009630)	ENSPTXG00000009629	ZC3H18 (ENSPTXG00000009626)	ENSPTXG00000009625	ENSPTXG00000009624	ZFPM1 (ENSPTXG00000009623)
Blue-lipped sea krait	MODERN SPECIES	2887											ENSLLTG00000000236	ANKRD11 (ENSLLTG00000000193)	SLC22A31 (ENSLLTG00000000171)	CDH15 (ENSLLTG00000000149)	ACSF3 (ENSLLTG00000000128)	CBFA2T3 (ENSLLTG00000017188) ##22	PABPN1L (ENSLLTG00000017183)	ENSLLTG00000017182
Indian cobra	MODERN SPECIES	12	ZNF276 (ENSNNAG00000011673)	VPS9D1 (ENSNNAG00000011616)	SPATA2L (ENSNNAG00000011599)	CDK10 (ENSNNAG00000011503)	CHMP1A (ENSNNAG00000011445)	DPEP1 (ENSNNAG00000011373)	ENSNNAG00000011346	CPNE7 (ENSNNAG00000010920)	RPL13 (ENSNNAG00000010861)	ENSNNAG00000010820	SPG7 (ENSNNAG00000010750)	ANKRD11 (ENSNNAG00000010709)	SLC22A31 (ENSNNAG00000010660)	CDH15 (ENSNNAG00000010542)	ACSF3 (ENSNNAG00000010512)	CBFA2T3 (ENSNNAG00000010403) ##22	PABPN1L (ENSNNAG00000010299)	TRAPPC2L (ENSNNAG00000010280)	GALNS (ENSNNAG00000009762)	APRT (ENSNNAG00000009699)	CDT1 (ENSNNAG00000009626)	PIEZO1 (ENSNNAG00000007884)	CTU2 (ENSNNAG00000007692)	RNF166 (ENSNNAG00000007672)	SNAI3 (ENSNNAG00000007656)	MVD (ENSNNAG00000007617)	CYBA (ENSNNAG00000007562)	ENSNNAG00000007528	ZC3H18 (ENSNNAG00000007489)	ENSNNAG00000007466	ENSNNAG00000007391
Elapidae	ANCESTRAL SPECIES																	ENSGT00950000183176.b.e.i.b ##22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00950000183176.b.e.i.b ##22
Blue-lipped sea krait	MODERN SPECIES	4784															ENSLLTG00000015481 ##22	ENSLLTG00000015479 ##22
Elapidae	ANCESTRAL SPECIES																	ENSGT00950000183176.b.e.j ##22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00950000183176.b.e.j ##22
Blue-lipped sea krait	MODERN SPECIES	7090																ENSLLTG00000005686 ##22
Mammalia	ANCESTRAL SPECIES	13	ENSGT00390000015057	ENSGT00960000187029	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00980000200525	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Platypus	MODERN SPECIES	2	VPS9D1 (ENSOANG00000004836)	ENSOANG00000041161	ENSOANG00000046202	CDK10 (ENSOANG00000004834)	CHMP1A (ENSOANG00000004833)	ENSOANG00000038620	DPEP1 (ENSOANG00000004832)	ENSOANG00000004831	CPNE7 (ENSOANG00000006551)	RPL13 (ENSOANG00000006729)	SPG7 (ENSOANG00000006730)	ANKRD11 (ENSOANG00000006731)	ENSOANG00000047619	CDH15 (ENSOANG00000006734)	ACSF3 (ENSOANG00000006736)	CBFA2T3 (ENSOANG00000013900) ##22	TRAPPC2L (ENSOANG00000044037)	ENSOANG00000013901	GALNS (ENSOANG00000020659)	APRT (ENSOANG00000038872)	CDT1 (ENSOANG00000013903)	PIEZO1 (ENSOANG00000009343)	CTU2 (ENSOANG00000009341)	ENSOANG00000044479	ENSOANG00000011365	MVD (ENSOANG00000011366)	CYBA (ENSOANG00000009702)	ENSOANG00000011367	ZC3H18 (ENSOANG00000011368)	ENSOANG00000003211	ZFPM1 (ENSOANG00000040393)
Theria	ANCESTRAL SPECIES	17	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00940000166733	ENSGT00940000171275	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00980000200525	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Marsupialia	ANCESTRAL SPECIES	17	ENSGT00390000015057	ENSGT00960000187029	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00940000171275	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403.i	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Opossum	MODERN SPECIES		SPATA2L (ENSMODG00000003496)	CDK10 (ENSMODG00000003504)	ENSMODG00000049796	CHMP1A (ENSMODG00000003517)	DPEP1 (ENSMODG00000003545)	ENSMODG00000003571	ENSMODG00000003555	ENSMODG00000040177	CPNE7 (ENSMODG00000003642)	RPL13 (ENSMODG00000003663)	SPG7 (ENSMODG00000003715)	ANKRD11 (ENSMODG00000003740)	ENSMODG00000003762	CDH15 (ENSMODG00000003842)	ACSF3 (ENSMODG00000003855)	CBFA2T3 (ENSMODG00000003869) ##22	ENSMODG00000003873	TRAPPC2L (ENSMODG00000003889)	GALNS (ENSMODG00000003976)	APRT (ENSMODG00000004041)	CDT1 (ENSMODG00000004053)	PIEZO1 (ENSMODG00000004122)	CTU2 (ENSMODG00000004151)	RNF166 (ENSMODG00000004160)	SNAI3 (ENSMODG00000004165)	MVD (ENSMODG00000004189)	CYBA (ENSMODG00000004220)	ENSMODG00000004230	ZC3H18 (ENSMODG00000004251)	BANP (ENSMODG00000004350)	CA5A (ENSMODG00000004374)
Marsupialia_b	ANCESTRAL SPECIES	19	ENSGT00390000015057	ENSGT00960000187029	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403.j	ENSGT00940000163403.i	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Diprotodontia	ANCESTRAL SPECIES	13	ENSGT00390000015057	ENSGT00960000187029	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403.j	ENSGT00940000163403.i	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Diprotodontia_a	ANCESTRAL SPECIES	14	ENSGT00390000015057	ENSGT00960000187029	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403.j	ENSGT00940000163403.i	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Common wonbat	MODERN SPECIES	312	ZNF276 (ENSVURG00010020658)	VPS9D1 (ENSVURG00010020668)	ENSVURG00010020678	SPATA2L (ENSVURG00010020681)	CDK10 (ENSVURG00010020687)	CHMP1A (ENSVURG00010020697)	DPEP1 (ENSVURG00010020700)	ENSVURG00010020705	CPNE7 (ENSVURG00010020710)	ENSVURG00010020720	SPG7 (ENSVURG00010020737)	ANKRD11 (ENSVURG00010020745)	SLC22A31 (ENSVURG00010020754)	CDH15 (ENSVURG00010020758)	ACSF3 (ENSVURG00010020768)	CBFA2T3 (ENSVURG00010020779) ##22	ENSVURG00010020790	TRAPPC2L (ENSVURG00010020795)	GALNS (ENSVURG00010020797)	APRT (ENSVURG00010020808)	ENSVURG00010020812	PIEZO1 (ENSVURG00010020822)	CTU2 (ENSVURG00010020832)	ENSVURG00010020837	ENSVURG00010020838	SNAI3 (ENSVURG00010020840)	MVD (ENSVURG00010020842)	CYBA (ENSVURG00010020848)	ENSVURG00010020849	ZC3H18 (ENSVURG00010020855)	ENSVURG00010020863
koala	MODERN SPECIES	34	ZNF276 (ENSPCIG00000024719)	VPS9D1 (ENSPCIG00000024722)	ENSPCIG00000036683	ENSPCIG00000024726	CDK10 (ENSPCIG00000024731)	CHMP1A (ENSPCIG00000024737)	DPEP1 (ENSPCIG00000024739)	ENSPCIG00000024742	ENSPCIG00000035926	CPNE7 (ENSPCIG00000022629)	SPG7 (ENSPCIG00000024753)	ANKRD11 (ENSPCIG00000016771)	ENSPCIG00000016774	CDH15 (ENSPCIG00000016775)	ACSF3 (ENSPCIG00000014646)	CBFA2T3 (ENSPCIG00000007037) ##22	ENSPCIG00000007038	TRAPPC2L (ENSPCIG00000007039)	GALNS (ENSPCIG00000007040)	ENSPCIG00000007043	PIEZO1 (ENSPCIG00000007075)	CTU2 (ENSPCIG00000007465)	RNF166 (ENSPCIG00000030690)	SNAI3 (ENSPCIG00000007471)	MVD (ENSPCIG00000007474)	CYBA (ENSPCIG00000007476)	IL17C (ENSPCIG00000007478)	ZC3H18 (ENSPCIG00000007482)	ENSPCIG00000007498	ENSPCIG00000007500	ENSPCIG00000007505
Wallaby	MODERN SPECIES	3541																ENSMEUG00000002083 ##22
Tasmanian devil	MODERN SPECIES	1	ZNF276 (ENSSHAG00000006045)	VPS9D1 (ENSSHAG00000005671)	ENSSHAG00000005431	SPATA2L (ENSSHAG00000020909)	CDK10 (ENSSHAG00000005046)	CHMP1A (ENSSHAG00000004486)	DPEP1 (ENSSHAG00000003173)	ENSSHAG00000000678	CPNE7 (ENSSHAG00000015959)	RPL13 (ENSSHAG00000020515)	SPG7 (ENSSHAG00000015455)	ANKRD11 (ENSSHAG00000014307)	ENSSHAG00000014110	CDH15 (ENSSHAG00000014046)	ACSF3 (ENSSHAG00000012810)	CBFA2T3 (ENSSHAG00000010129) ##22	ENSSHAG00000010001	TRAPPC2L (ENSSHAG00000025346)	GALNS (ENSSHAG00000009521)	ENSSHAG00000022499	CDT1 (ENSSHAG00000000481)	PIEZO1 (ENSSHAG00000007529)	CTU2 (ENSSHAG00000007366)	ENSSHAG00000007244	SNAI3 (ENSSHAG00000006702)	MVD (ENSSHAG00000005976)	CYBA (ENSSHAG00000005777)	ENSSHAG00000005664	ENSSHAG00000003741	ENSSHAG00000001804	BANP (ENSSHAG00000002473)
Eutheria	ANCESTRAL SPECIES	31	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00980000200525	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00980000200525	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Equus	ANCESTRAL SPECIES	20	ENSGT00390000003058.b.a.b	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Horse	MODERN SPECIES	22	TCF25 (ENSECAG00000018986)	SPIRE2 (ENSECAG00000011856)	FANCA (ENSECAG00000024214)	ZNF276 (ENSECAG00000019563)	VPS9D1 (ENSECAG00000012538)	SPATA2L (ENSECAG00000012197)	CDK10 (ENSECAG00000024995)	CHMP1A (ENSECAG00000033210)	DPEP1 (ENSECAG00000022966)	CPNE7 (ENSECAG00000020272)	RPL13 (ENSECAG00000011670)	SPG7 (ENSECAG00000018645)	ANKRD11 (ENSECAG00000029519)	CDH15 (ENSECAG00000022526)	ACSF3 (ENSECAG00000015121)	CBFA2T3 (ENSECAG00000003668) ##22	PABPN1L (ENSECAG00000000378)	ENSECAG00000053714	GALNS (ENSECAG00000008732)	APRT (ENSECAG00000026808)	CDT1 (ENSECAG00000005547)	PIEZO1 (ENSECAG00000020292)	RNF166 (ENSECAG00000012880)	CTU2 (ENSECAG00000016209)	SNAI3 (ENSECAG00000012131)	MVD (ENSECAG00000011206)	CYBA (ENSECAG00000010965)	IL17C (ENSECAG00000041547)	ZC3H18 (ENSECAG00000011599)	ENSECAG00000010806	ZFPM1 (ENSECAG00000028501)
Donkey	MODERN SPECIES	20	FANCA (ENSEASG00005001365)	ZNF276 (ENSEASG00005001360)	VPS9D1 (ENSEASG00005001347)	SPATA2L (ENSEASG00005029392)	CDK10 (ENSEASG00005001328)	SPATA33 (ENSEASG00005035790)	CHMP1A (ENSEASG00005001313)	DPEP1 (ENSEASG00005001271)	CPNE7 (ENSEASG00005000951)	RPL13 (ENSEASG00005029817)	SPG7 (ENSEASG00005000880)	ENSEASG00005016380	ENSEASG00005037258	CDH15 (ENSEASG00005000818)	ACSF3 (ENSEASG00005000813)	CBFA2T3 (ENSEASG00005000800) ##22	PABPN1L (ENSEASG00005000777)	TRAPPC2L (ENSEASG00005000775)	GALNS (ENSEASG00005000770)	ENSEASG00005032731	CDT1 (ENSEASG00005000688)	ENSEASG00005038543	ENSEASG00005029444	CTU2 (ENSEASG00005000626)	RNF166 (ENSEASG00005000616)	SNAI3 (ENSEASG00005000614)	MVD (ENSEASG00005000611)	CYBA (ENSEASG00005025697)	IL17C (ENSEASG00005026160)	ZC3H18 (ENSEASG00005000446)	ENSEASG00005000403
Chiroptera	ANCESTRAL SPECIES	21										ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00940000153837.a.b	ENSGT00390000009456	ENSGT00390000018876	ENSGT00940000156370	ENSGT00420000029847	ENSGT00420000029858	ENSGT00940000153725.a.b.a	ENSGT00940000157021	ENSGT00390000011085	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Microbat	MODERN SPECIES	1135											ENSMLUG00000010963	ANKRD11 (ENSMLUG00000016458)	SLC22A31 (ENSMLUG00000016450)	CDH15 (ENSMLUG00000016441)	ACSF3 (ENSMLUG00000003035)	CBFA2T3 (ENSMLUG00000003233) ##22	ENSMLUG00000003228	ENSMLUG00000003224	GALNS (ENSMLUG00000003217)	APRT (ENSMLUG00000003209)	CDT1 (ENSMLUG00000003204)	PIEZO1 (ENSMLUG00000008989)	CTU2 (ENSMLUG00000008946)	RNF166 (ENSMLUG00000008936)	SNAI3 (ENSMLUG00000008899)	MVD (ENSMLUG00000008875)	CYBA (ENSMLUG00000008863)	IL17C (ENSMLUG00000008861)	ENSMLUG00000008818	ENSMLUG00000029422	ZNF469 (ENSMLUG00000028788)
Greater horseshoe bat	MODERN SPECIES	6	RHPN2 (ENSRFEG00010005821)	FAAP24 (ENSRFEG00010005778)	CEP89 (ENSRFEG00010005716)	SLC7A9 (ENSRFEG00010005658)	NUDT19 (ENSRFEG00010005577)	RGS9BP (ENSRFEG00010005537)	ANKRD27 (ENSRFEG00010005470)	PDCD5 (ENSRFEG00010005420)	RPL13 (ENSRFEG00010005364)	ENSRFEG00010005337	SPG7 (ENSRFEG00010017274)	ANKRD11 (ENSRFEG00010017028)	SLC22A31 (ENSRFEG00010016932)	CDH15 (ENSRFEG00010016864)	ACSF3 (ENSRFEG00010016800)	CBFA2T3 (ENSRFEG00010016729) ##22	PABPN1L (ENSRFEG00010016538)	TRAPPC2L (ENSRFEG00010016434)	GALNS (ENSRFEG00010016413)	APRT (ENSRFEG00010016234)	CDT1 (ENSRFEG00010015959)	ENSRFEG00010015452	CTU2 (ENSRFEG00010015429)	RNF166 (ENSRFEG00010015249)	SNAI3 (ENSRFEG00010015196)	MVD (ENSRFEG00010015133)	CYBA (ENSRFEG00010015058)	IL17C (ENSRFEG00010015002)	ZC3H18 (ENSRFEG00010014910)	ENSRFEG00010014665	ZFPM1 (ENSRFEG00010014593)
Megabat	MODERN SPECIES	5299																CBFA2T3 (ENSPVAG00000002712) ##22	PABPN1L (ENSPVAG00000002716)	TRAPPC2L (ENSPVAG00000002718)	GALNS (ENSPVAG00000002723)	APRT (ENSPVAG00000002727)	CDT1 (ENSPVAG00000002731)
Carnivora	ANCESTRAL SPECIES	2	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Felidae	ANCESTRAL SPECIES	7	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Panthera	ANCESTRAL SPECIES	10	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00390000011116
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442.`b	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT01090000260040.a.a.a	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00390000011116
lion	MODERN SPECIES	15	VPS9D1 (ENSPLOG00000011815)	SPATA2L (ENSPLOG00000011717)	CDK10 (ENSPLOG00000011467)	SPATA33 (ENSPLOG00000011398)	CHMP1A (ENSPLOG00000011262)	DPEP1 (ENSPLOG00000011157)	CPNE7 (ENSPLOG00000010878)	RPL13 (ENSPLOG00000010753)	SPG7 (ENSPLOG00000010152)	ANKRD11 (ENSPLOG00000009987)	ENSPLOG00000009890	ENSPLOG00000009869	SLC22A31 (ENSPLOG00000009830)	CDH15 (ENSPLOG00000009712)	ACSF3 (ENSPLOG00000009585)	CBFA2T3 (ENSPLOG00000009563) ##22	PABPN1L (ENSPLOG00000009491)	TRAPPC2L (ENSPLOG00000009396)	GALNS (ENSPLOG00000009345)	APRT (ENSPLOG00000009279)	CDT1 (ENSPLOG00000008900)	ENSPLOG00000008656	CTU2 (ENSPLOG00000008529)	RNF166 (ENSPLOG00000008414)	SNAI3 (ENSPLOG00000008309)	MVD (ENSPLOG00000008247)	CYBA (ENSPLOG00000008197)	IL17C (ENSPLOG00000008172)	ZC3H18 (ENSPLOG00000008137)	BANP (ENSPLOG00000007791)	CA5A (ENSPLOG00000007724)
leopard	MODERN SPECIES	60	FANCA (ENSPPRG00000012181)	ZNF276 (ENSPPRG00000008094)	SPATA2L (ENSPPRG00000006617)	CDK10 (ENSPPRG00000005773)	SPATA33 (ENSPPRG00000005539)	CHMP1A (ENSPPRG00000005393)	DPEP1 (ENSPPRG00000005106)	ENSPPRG00000004734	ENSPPRG00000004211	RPL13 (ENSPPRG00000003949)	SPG7 (ENSPPRG00000002819)	ENSPPRG00000000709	SLC22A31 (ENSPPRG00000022959)	CDH15 (ENSPPRG00000023718)	ACSF3 (ENSPPRG00000023828)	CBFA2T3 (ENSPPRG00000024504) ##22	PABPN1L (ENSPPRG00000015106)	TRAPPC2L (ENSPPRG00000013246)	GALNS (ENSPPRG00000010540)	APRT (ENSPPRG00000010226)	CDT1 (ENSPPRG00000010026)	ENSPPRG00000009590	CTU2 (ENSPPRG00000009232)	RNF166 (ENSPPRG00000008966)	SNAI3 (ENSPPRG00000008511)	MVD (ENSPPRG00000008426)	CYBA (ENSPPRG00000008183)	IL17C (ENSPPRG00000007706)	ENSPPRG00000007243	ENSPPRG00000005543	BANP (ENSPPRG00000004221)
Cat	MODERN SPECIES	246	ZNF276 (ENSFCAG00000003794)	VPS9D1 (ENSFCAG00000003793)	SPATA2L (ENSFCAG00000003792)	ENSFCAG00000040629	CDK10 (ENSFCAG00000027356)	CHMP1A (ENSFCAG00000025745)	DPEP1 (ENSFCAG00000003788)	CPNE7 (ENSFCAG00000003339)	RPL13 (ENSFCAG00000003338)	SPG7 (ENSFCAG00000003337)	ANKRD11 (ENSFCAG00000043012)	ENSFCAG00000032092	SLC22A31 (ENSFCAG00000038126)	CDH15 (ENSFCAG00000004201)	ACSF3 (ENSFCAG00000004199)	CBFA2T3 (ENSFCAG00000014971) ##22	PABPN1L (ENSFCAG00000010465)	TRAPPC2L (ENSFCAG00000037670)	GALNS (ENSFCAG00000013017)	APRT (ENSFCAG00000039632)	CDT1 (ENSFCAG00000013014)	ENSFCAG00000051259	RNF166 (ENSFCAG00000008487)	CTU2 (ENSFCAG00000005923)	SNAI3 (ENSFCAG00000043885)	MVD (ENSFCAG00000006656)	CYBA (ENSFCAG00000006655)	ENSFCAG00000038194	ENSFCAG00000043160	ZC3H18 (ENSFCAG00000025261)	ZFPM1 (ENSFCAG00000041829)
Caniformia	ANCESTRAL SPECIES	1	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Canidae	ANCESTRAL SPECIES	11	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415	ENSGT00390000011116
Dog	MODERN SPECIES	33	FANCA (ENSCAFG00845001750)	ENSCAFG00845001891	ZNF276 (ENSCAFG00845001927)	VPS9D1 (ENSCAFG00845001981)	SPATA2L (ENSCAFG00845002015)	CDK10 (ENSCAFG00845002051)	CHMP1A (ENSCAFG00845002191)	DPEP1 (ENSCAFG00845002242)	CPNE7 (ENSCAFG00845002287)	RPL13 (ENSCAFG00845002331)	SPG7 (ENSCAFG00845002439)	ANKRD11 (ENSCAFG00845002586)	SLC22A31 (ENSCAFG00845002643)	CDH15 (ENSCAFG00845002672)	ACSF3 (ENSCAFG00845002712)	CBFA2T3 (ENSCAFG00845002914) ##22	TRAPPC2L (ENSCAFG00845003021)	GALNS (ENSCAFG00845003078)	APRT (ENSCAFG00845003116)	CDT1 (ENSCAFG00845003137)	PIEZO1 (ENSCAFG00845003243)	CTU2 (ENSCAFG00845003409)	RNF166 (ENSCAFG00845003452)	SNAI3 (ENSCAFG00845003473)	MVD (ENSCAFG00845003495)	CYBA (ENSCAFG00845003520)	IL17C (ENSCAFG00845003539)	ZC3H18 (ENSCAFG00845003583)	ZFPM1 (ENSCAFG00845003652)	ZNF469 (ENSCAFG00845003692)	BANP (ENSCAFG00845003720)
Dingo	MODERN SPECIES	373	FANCA (ENSCAFG00020005298)	ENSCAFG00020005247	VPS9D1 (ENSCAFG00020005238)	SPATA2L (ENSCAFG00020005236)	CDK10 (ENSCAFG00020005227)	SPATA33 (ENSCAFG00020005222)	CHMP1A (ENSCAFG00020005214)	DPEP1 (ENSCAFG00020005166)	CPNE7 (ENSCAFG00020005135)	RPL13 (ENSCAFG00020005125)	SPG7 (ENSCAFG00020005114)	ANKRD11 (ENSCAFG00020005087)	ENSCAFG00020005049	CDH15 (ENSCAFG00020005028)	ACSF3 (ENSCAFG00020005020)	CBFA2T3 (ENSCAFG00020005003) ##22	TRAPPC2L (ENSCAFG00020005001)	GALNS (ENSCAFG00020004991)	APRT (ENSCAFG00020004978)	CDT1 (ENSCAFG00020004973)	CTU2 (ENSCAFG00020004731)	RNF166 (ENSCAFG00020004724)	SNAI3 (ENSCAFG00020004719)	MVD (ENSCAFG00020004711)	CYBA (ENSCAFG00020004707)	IL17C (ENSCAFG00020004701)	ZC3H18 (ENSCAFG00020004617)	ZFPM1 (ENSCAFG00020004606)	BANP (ENSCAFG00020004582)	CA5A (ENSCAFG00020004529)	SLC7A5 (ENSCAFG00020004501)
Red fox	MODERN SPECIES	51	SPIRE2 (ENSVVUG00000004400)	FANCA (ENSVVUG00000003998)	VPS9D1 (ENSVVUG00000003950)	ZNF276 (ENSVVUG00000003941)	SPATA2L (ENSVVUG00000003935)	CDK10 (ENSVVUG00000003919)	ENSVVUG00000003913	CHMP1A (ENSVVUG00000003894)	DPEP1 (ENSVVUG00000003885)	CPNE7 (ENSVVUG00000003855)	ENSVVUG00000003839	SPG7 (ENSVVUG00000003819)	ANKRD11 (ENSVVUG00000003768)	CDH15 (ENSVVUG00000003736)	ACSF3 (ENSVVUG00000003699)	CBFA2T3 (ENSVVUG00000003674) ##22	ENSVVUG00000003659	TRAPPC2L (ENSVVUG00000003588)	GALNS (ENSVVUG00000003542)	APRT (ENSVVUG00000003521)	CDT1 (ENSVVUG00000003504)	PIEZO1 (ENSVVUG00000003475)	CTU2 (ENSVVUG00000003254)	ENSVVUG00000003239	SNAI3 (ENSVVUG00000003233)	MVD (ENSVVUG00000003226)	CYBA (ENSVVUG00000003220)	IL17C (ENSVVUG00000003193)	ZC3H18 (ENSVVUG00000003166)	ENSVVUG00000003145	ZNF469 (ENSVVUG00000003140)
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Mustelinae	ANCESTRAL SPECIES	6	ENSGT00390000005563	ENSGT00390000003058.b.a.b	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00940000169624	ENSGT00530000063823.b.a
American mink	MODERN SPECIES	98	TCF25 (ENSNVIG00000011116)	SPIRE2 (ENSNVIG00000011101)	FANCA (ENSNVIG00000010872)	ZNF276 (ENSNVIG00000010837)	VPS9D1 (ENSNVIG00000010585)	SPATA2L (ENSNVIG00000010577)	CDK10 (ENSNVIG00000010537)	ENSNVIG00000010534	ENSNVIG00000010517	DPEP1 (ENSNVIG00000010498)	CPNE7 (ENSNVIG00000010467)	SPG7 (ENSNVIG00000010273)	ANKRD11 (ENSNVIG00000010188)	CDH15 (ENSNVIG00000010128)	ACSF3 (ENSNVIG00000010059)	CBFA2T3 (ENSNVIG00000010003) ##22	ENSNVIG00000009974	TRAPPC2L (ENSNVIG00000009962)	GALNS (ENSNVIG00000009923)	APRT (ENSNVIG00000009917)	CDT1 (ENSNVIG00000009908)	PIEZO1 (ENSNVIG00000008943)	CTU2 (ENSNVIG00000008858)	RNF166 (ENSNVIG00000008821)	SNAI3 (ENSNVIG00000008803)	MVD (ENSNVIG00000008732)	CYBA (ENSNVIG00000008678)	IL17C (ENSNVIG00000008665)	ZC3H18 (ENSNVIG00000008594)	ENSNVIG00000008579	ENSNVIG00000008543
Ferret	MODERN SPECIES	203	TCF25 (ENSMPUG00000006997)	SPIRE2 (ENSMPUG00000007101)	FANCA (ENSMPUG00000007209)	ZNF276 (ENSMPUG00000007237)	VPS9D1 (ENSMPUG00000007254)	SPATA2L (ENSMPUG00000007274)	CDK10 (ENSMPUG00000007267)	CHMP1A (ENSMPUG00000007281)	DPEP1 (ENSMPUG00000007348)	CPNE7 (ENSMPUG00000007361)	SPG7 (ENSMPUG00000007560)	ANKRD11 (ENSMPUG00000007572)	ENSMPUG00000007589	CDH15 (ENSMPUG00000007597)	ACSF3 (ENSMPUG00000007610)	CBFA2T3 (ENSMPUG00000007614) ##22	TRAPPC2L (ENSMPUG00000007622)	GALNS (ENSMPUG00000007673)	ENSMPUG00000007812	PIEZO1 (ENSMPUG00000007819)	ENSMPUG00000008037	CTU2 (ENSMPUG00000008062)	RNF166 (ENSMPUG00000008078)	SNAI3 (ENSMPUG00000008104)	MVD (ENSMPUG00000008113)	CYBA (ENSMPUG00000008126)	IL17C (ENSMPUG00000008198)	ZC3H18 (ENSMPUG00000008200)	ENSMPUG00000008212	ENSMPUG00000008220	ENSMPUG00000008229
Ursidae	ANCESTRAL SPECIES	8	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT01030000240269	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Ursus	ANCESTRAL SPECIES	26	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT01030000240269	ENSGT00950000183176.b.e ##22	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00940000171092	ENSGT00530000065415	ENSGT00390000011116
American black bear	MODERN SPECIES	1540																CBFA2T3 (ENSUAMG00000025639) ##22	TRAPPC2L (ENSUAMG00000025642)	GALNS (ENSUAMG00000025643)	APRT (ENSUAMG00000025758)	ENSUAMG00000025759
Polar bear	MODERN SPECIES	246	SPIRE2 (ENSUMAG00000009227)	FANCA (ENSUMAG00000009158)	ENSUMAG00000009120	VPS9D1 (ENSUMAG00000009091)	CDK10 (ENSUMAG00000008916)	ENSUMAG00000008888	CHMP1A (ENSUMAG00000008878)	DPEP1 (ENSUMAG00000008808)	CPNE7 (ENSUMAG00000008792)	SPG7 (ENSUMAG00000008500)	ENSUMAG00000008430	ENSUMAG00000008417	CDH15 (ENSUMAG00000008412)	ENSUMAG00000008401	ENSUMAG00000008393	ENSUMAG00000008350 ##22	TRAPPC2L (ENSUMAG00000008332)	GALNS (ENSUMAG00000008324)	CDT1 (ENSUMAG00000008317)	CTU2 (ENSUMAG00000008282)	ENSUMAG00000008277	ENSUMAG00000008270	ENSUMAG00000008254	ZC3H18 (ENSUMAG00000008186)	ENSUMAG00000008144	BANP (ENSUMAG00000008131)	CA5A (ENSUMAG00000008023)	ENSUMAG00000007995	KLHDC4 (ENSUMAG00000007989)	ENSUMAG00000007985	ZCCHC14 (ENSUMAG00000007878)
Giant Panda	MODERN SPECIES	3	ENSAMEG00000001340	FANCA (ENSAMEG00000001287)	ZNF276 (ENSAMEG00000001273)	VPS9D1 (ENSAMEG00000001254)	SPATA2L (ENSAMEG00000029035)	CDK10 (ENSAMEG00000001223)	SPATA33 (ENSAMEG00000019062)	CHMP1A (ENSAMEG00000001216)	DPEP1 (ENSAMEG00000001189)	CPNE7 (ENSAMEG00000001125)	SPG7 (ENSAMEG00000001088)	RPL13 (ENSAMEG00000001111)	ANKRD11 (ENSAMEG00000001060)	ACSF3 (ENSAMEG00000003721)	ENSAMEG00000025457	CBFA2T3 (ENSAMEG00000000272) ##22	ENSAMEG00000029411	TRAPPC2L (ENSAMEG00000000296)	GALNS (ENSAMEG00000000312)	ENSAMEG00000000371	CTU2 (ENSAMEG00000018152)	ENSAMEG00000023865	SNAI3 (ENSAMEG00000027774)	MVD (ENSAMEG00000018166)	CYBA (ENSAMEG00000018174)	IL17C (ENSAMEG00000018178)	ZC3H18 (ENSAMEG00000018179)	ZFPM1 (ENSAMEG00000018149)	ZNF469 (ENSAMEG00000030238)	BANP (ENSAMEG00000018194)	CA5A (ENSAMEG00000018202)
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.e.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Cetacea	ANCESTRAL SPECIES	6	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.e.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b.f	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.e.a	ENSGT00390000007818.f	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b.f	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.e.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b.f	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.e.a	ENSGT00940000156329	ENSGT00940000155966.o	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b.f	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.e.a	ENSGT00940000156329	ENSGT00940000155966.o	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b.f	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Narwhal	MODERN SPECIES	296	TCF25 (ENSMMNG00015018167)	SPIRE2 (ENSMMNG00015018215)	FANCA (ENSMMNG00015018287)	ZNF276 (ENSMMNG00015018696)	VPS9D1 (ENSMMNG00015018789)	ENSMMNG00015018925	CDK10 (ENSMMNG00015000039)	SPATA33 (ENSMMNG00015000110)	CHMP1A (ENSMMNG00015000139)	DPEP1 (ENSMMNG00015000186)	RPL13 (ENSMMNG00015000239)	SPG7 (ENSMMNG00015000288)	SLC22A31 (ENSMMNG00015000365)	CDH15 (ENSMMNG00015000391)	ACSF3 (ENSMMNG00015000443)	CBFA2T3 (ENSMMNG00015000500) ##22	PABPN1L (ENSMMNG00015000557)	TRAPPC2L (ENSMMNG00015000621)	GALNS (ENSMMNG00015000663)	APRT (ENSMMNG00015000690)	CDT1 (ENSMMNG00015000724)	PIEZO1 (ENSMMNG00015000785)	CTU2 (ENSMMNG00015000879)	ENSMMNG00015000928	SNAI3 (ENSMMNG00015000980)	MVD (ENSMMNG00015001001)	CYBA (ENSMMNG00015001037)	IL17C (ENSMMNG00015001065)	ZC3H18 (ENSMMNG00015001109)	ZFPM1 (ENSMMNG00015001163)	BANP (ENSMMNG00015001362)
Beluga whale	MODERN SPECIES	12	FANCA (ENSDLEG00000002221)	ZNF276 (ENSDLEG00000002305)	VPS9D1 (ENSDLEG00000002337)	SPATA2L (ENSDLEG00000002403)	CDK10 (ENSDLEG00000002415)	ENSDLEG00000002434	CHMP1A (ENSDLEG00000002445)	DPEP1 (ENSDLEG00000002459)	ENSDLEG00000002468	RPL13 (ENSDLEG00000002479)	SPG7 (ENSDLEG00000002493)	ANKRD11 (ENSDLEG00000002540)	ENSDLEG00000002585	CDH15 (ENSDLEG00000002601)	ACSF3 (ENSDLEG00000002624)	CBFA2T3 (ENSDLEG00000002646) ##22	PABPN1L (ENSDLEG00000002670)	TRAPPC2L (ENSDLEG00000002703)	GALNS (ENSDLEG00000002744)	ENSDLEG00000002754	CDT1 (ENSDLEG00000002762)	ENSDLEG00000002787	CTU2 (ENSDLEG00000002847)	RNF166 (ENSDLEG00000002871)	SNAI3 (ENSDLEG00000002884)	MVD (ENSDLEG00000002894)	CYBA (ENSDLEG00000002909)	IL17C (ENSDLEG00000002917)	ZC3H18 (ENSDLEG00000002941)	ZFPM1 (ENSDLEG00000002967)	ZNF469 (ENSDLEG00000002998)
Vaquita	MODERN SPECIES	10	ZNF276 (ENSPSNG00000009036)	SPATA2L (ENSPSNG00000008718)	CDK10 (ENSPSNG00000008663)	SPATA33 (ENSPSNG00000008622)	CHMP1A (ENSPSNG00000008578)	DPEP1 (ENSPSNG00000008489)	ENSPSNG00000008274	RPL13 (ENSPSNG00000008188)	SPG7 (ENSPSNG00000008067)	ANKRD11 (ENSPSNG00000007908)	ENSPSNG00000007850	ENSPSNG00000007802	CDH15 (ENSPSNG00000007647)	ACSF3 (ENSPSNG00000007609)	ENSPSNG00000007577	CBFA2T3 (ENSPSNG00000007494) ##22	PABPN1L (ENSPSNG00000007376)	TRAPPC2L (ENSPSNG00000007277)	GALNS (ENSPSNG00000007211)	APRT (ENSPSNG00000007177)	CDT1 (ENSPSNG00000007139)	PIEZO1 (ENSPSNG00000006734)	CTU2 (ENSPSNG00000006620)	RNF166 (ENSPSNG00000006541)	ENSPSNG00000006413	ENSPSNG00000006358	ENSPSNG00000006321	MVD (ENSPSNG00000006286)	CYBA (ENSPSNG00000006234)	IL17C (ENSPSNG00000006202)	ZC3H18 (ENSPSNG00000021780)
Dolphin	MODERN SPECIES	1688																CBFA2T3 (ENSTTRG00000004701) ##22	PABPN1L (ENSTTRG00000004691)	TRAPPC2L (ENSTTRG00000004677)	GALNS (ENSTTRG00000004648)	APRT (ENSTTRG00000004627)	CDT1 (ENSTTRG00000004567)
Sperm whale	MODERN SPECIES	8	FANCA (ENSPCTG00005010696)	ZNF276 (ENSPCTG00005010516)	VPS9D1 (ENSPCTG00005010417)	ENSPCTG00005010332	CDK10 (ENSPCTG00005010001)	SPATA33 (ENSPCTG00005009900)	CHMP1A (ENSPCTG00005009818)	DPEP1 (ENSPCTG00005009693)	ENSPCTG00005009660	RPL13 (ENSPCTG00005009573)	SPG7 (ENSPCTG00005009310)	CTU2 (ENSPCTG00005008354)	CDT1 (ENSPCTG00005006338)	APRT (ENSPCTG00005006280)	ENSPCTG00005006253	CBFA2T3 (ENSPCTG00005006222) ##22	ENSPCTG00005006177	ENSPCTG00005006143	CDH15 (ENSPCTG00005005977)	ENSPCTG00005005941	ZC3H18 (ENSPCTG00005005904)	ENSPCTG00005005873	BANP (ENSPCTG00005005413)	CA5A (ENSPCTG00005005310)	KLHDC4 (ENSPCTG00005005097)	JPH3 (ENSPCTG00005005015)	ZCCHC14 (ENSPCTG00005004944)	ENSPCTG00005004924	FBXO31 (ENSPCTG00005004798)	FOXL1 (ENSPCTG00005004701)	FOXC2 (ENSPCTG00005004692)
Blue whale	MODERN SPECIES	10	FANCA (ENSBMSG00010013942)	ZNF276 (ENSBMSG00010013759)	VPS9D1 (ENSBMSG00010013738)	ENSBMSG00010013723	CDK10 (ENSBMSG00010013700)	SPATA33 (ENSBMSG00010013681)	CHMP1A (ENSBMSG00010013673)	DPEP1 (ENSBMSG00010013654)	ENSBMSG00010013647	ENSBMSG00010013625	SPG7 (ENSBMSG00010013588)	ENSBMSG00010013563	SLC22A31 (ENSBMSG00010013543)	CDH15 (ENSBMSG00010013501)	ACSF3 (ENSBMSG00010013451)	CBFA2T3 (ENSBMSG00010020288) ##22	PABPN1L (ENSBMSG00010020243)	TRAPPC2L (ENSBMSG00010020167)	GALNS (ENSBMSG00010020134)	APRT (ENSBMSG00010020108)	CDT1 (ENSBMSG00010020082)	CTU2 (ENSBMSG00010019409)	RNF166 (ENSBMSG00010019316)	SNAI3 (ENSBMSG00010019290)	MVD (ENSBMSG00010019271)	CYBA (ENSBMSG00010019240)	IL17C (ENSBMSG00010019217)	ZC3H18 (ENSBMSG00010019187)	ENSBMSG00010019135	ZFPM1 (ENSBMSG00010019106)	BANP (ENSBMSG00010018677)
Pecora	ANCESTRAL SPECIES	4	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.e.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Yarkand deer	MODERN SPECIES	27	SPIRE2 (ENSCHYG00000001206)	FANCA (ENSCHYG00000001109)	VPS9D1 (ENSCHYG00000001021)	ZNF276 (ENSCHYG00000000947)	SPATA2L (ENSCHYG00000000928)	CDK10 (ENSCHYG00000000898)	CHMP1A (ENSCHYG00000000869)	DPEP1 (ENSCHYG00000000853)	CPNE7 (ENSCHYG00000000789)	ENSCHYG00000000757	SPG7 (ENSCHYG00000000517)	ANKRD11 (ENSCHYG00000000357)	SLC22A31 (ENSCHYG00000000292)	CDH15 (ENSCHYG00000000273)	ACSF3 (ENSCHYG00000000245)	CBFA2T3 (ENSCHYG00000000207) ##22	ENSCHYG00000000170	TRAPPC2L (ENSCHYG00000000144)	GALNS (ENSCHYG00000000089)	CDT1 (ENSCHYG00000000044)	PIEZO1 (ENSCHYG00000003236)	CTU2 (ENSCHYG00000003155)	RNF166 (ENSCHYG00000003134)	SNAI3 (ENSCHYG00000003114)	MVD (ENSCHYG00000003094)	IL17C (ENSCHYG00000003083)	CYBA (ENSCHYG00000003064)	ZC3H18 (ENSCHYG00000003027)	ZFPM1 (ENSCHYG00000002961)	ZNF469 (ENSCHYG00000002944)	BANP (ENSCHYG00000002777)
Percora_a	ANCESTRAL SPECIES	4	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.e.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Bovidae	ANCESTRAL SPECIES	4	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.e.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Bovinae	ANCESTRAL SPECIES	3	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.e.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Bos	ANCESTRAL SPECIES	4	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.e.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Bos_a	ANCESTRAL SPECIES	22	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.e.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Domestic yak	MODERN SPECIES	12	SPIRE2 (ENSBGRG00000025749)	FANCA (ENSBGRG00000026229)	VPS9D1 (ENSBGRG00000026719)	SPATA2L (ENSBGRG00000026749)	CDK10 (ENSBGRG00000026766)	ENSBGRG00000026801	CHMP1A (ENSBGRG00000026824)	DPEP1 (ENSBGRG00000026852)	CPNE7 (ENSBGRG00000026854)	ENSBGRG00000026855	SPG7 (ENSBGRG00000026859)	ANKRD11 (ENSBGRG00000026866)	ENSBGRG00000026870	CDH15 (ENSBGRG00000026871)	ACSF3 (ENSBGRG00000026875)	CBFA2T3 (ENSBGRG00000026878) ##22	ENSBGRG00000026880	TRAPPC2L (ENSBGRG00000026882)	ENSBGRG00000026885	GALNS (ENSBGRG00000026887)	APRT (ENSBGRG00000026889)	CDT1 (ENSBGRG00000026890)	PIEZO1 (ENSBGRG00000026892)	CTU2 (ENSBGRG00000026899)	ENSBGRG00000026904	SNAI3 (ENSBGRG00000026905)	MVD (ENSBGRG00000026907)	CYBA (ENSBGRG00000026909)	IL17C (ENSBGRG00000026910)	ZC3H18 (ENSBGRG00000026911)	ENSBGRG00000026913
Wild yak	MODERN SPECIES	488	FANCA (ENSBMUG00000011777)	ZNF276 (ENSBMUG00000011836)	VPS9D1 (ENSBMUG00000012041)	SPATA2L (ENSBMUG00000012376)	CDK10 (ENSBMUG00000012383)	ENSBMUG00000012395	ENSBMUG00000012413	DPEP1 (ENSBMUG00000012426)	CPNE7 (ENSBMUG00000012611)	RPL13 (ENSBMUG00000012686)	SPG7 (ENSBMUG00000012712)	ANKRD11 (ENSBMUG00000012807)	SLC22A31 (ENSBMUG00000012847)	CDH15 (ENSBMUG00000012874)	ACSF3 (ENSBMUG00000012901)	CBFA2T3 (ENSBMUG00000013034) ##22	PABPN1L (ENSBMUG00000013084)	TRAPPC2L (ENSBMUG00000013133)	GALNS (ENSBMUG00000013165)	ENSBMUG00000013182	CDT1 (ENSBMUG00000013216)	ENSBMUG00000013286	ENSBMUG00000013338	CTU2 (ENSBMUG00000013372)	RNF166 (ENSBMUG00000013384)	SNAI3 (ENSBMUG00000013406)	MVD (ENSBMUG00000013426)	CYBA (ENSBMUG00000013440)	IL17C (ENSBMUG00000013455)	ZC3H18 (ENSBMUG00000013519)	ENSBMUG00000013540
Bos_b	ANCESTRAL SPECIES		ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.e.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Cow	MODERN SPECIES	9	FANCA (ENSBTAG00000001906)	ZNF276 (ENSBTAG00000001904)	VPS9D1 (ENSBTAG00000021165)	SPATA2L (ENSBTAG00000033334)	CDK10 (ENSBTAG00000033333)	SPATA33 (ENSBTAG00000052192)	CHMP1A (ENSBTAG00000033331)	DPEP1 (ENSBTAG00000033326)	CPNE7 (ENSBTAG00000012215)	RPL13 (ENSBTAG00000012044)	SPG7 (ENSBTAG00000012041)	ANKRD11 (ENSBTAG00000016006)	SLC22A31 (ENSBTAG00000011533)	CDH15 (ENSBTAG00000011530)	ACSF3 (ENSBTAG00000015968)	CBFA2T3 (ENSBTAG00000010927) ##22	ENSBTAG00000023752	TRAPPC2L (ENSBTAG00000019184)	GALNS (ENSBTAG00000004568)	APRT (ENSBTAG00000000639)	CDT1 (ENSBTAG00000000638)	PIEZO1 (ENSBTAG00000020944)	RNF166 (ENSBTAG00000020942)	CTU2 (ENSBTAG00000020943)	SNAI3 (ENSBTAG00000017528)	MVD (ENSBTAG00000012059)	CYBA (ENSBTAG00000051907)	ZC3H18 (ENSBTAG00000019520)	ENSBTAG00000018507	ZFPM1 (ENSBTAG00000015766)	BANP (ENSBTAG00000023745)
Hybrid Bos Indicus	MODERN SPECIES	9	FANCA (ENSBIXG00005012248)	ZNF276 (ENSBIXG00005012013)	VPS9D1 (ENSBIXG00005011977)	SPATA2L (ENSBIXG00005001207)	CDK10 (ENSBIXG00005011893)	ENSBIXG00005011837	CHMP1A (ENSBIXG00005001175)	DPEP1 (ENSBIXG00005011785)	CPNE7 (ENSBIXG00005011748)	ENSBIXG00005011663	SPG7 (ENSBIXG00005011614)	ENSBIXG00005011483	ENSBIXG00005011435	CDH15 (ENSBIXG00005011404)	ACSF3 (ENSBIXG00005011368)	CBFA2T3 (ENSBIXG00005001081) ##22	ENSBIXG00005001072	TRAPPC2L (ENSBIXG00005011227)	GALNS (ENSBIXG00005011178)	CDT1 (ENSBIXG00005006205)	PIEZO1 (ENSBIXG00005000994)	CTU2 (ENSBIXG00005010824)	RNF166 (ENSBIXG00005000607)	SNAI3 (ENSBIXG00005010723)	MVD (ENSBIXG00005010706)	ZC3H18 (ENSBIXG00005010680)	CYBA (ENSBIXG00005010609)	IL17C (ENSBIXG00005010593)	ENSBIXG00005000719	ZFPM1 (ENSBIXG00005010566)	ZNF469 (ENSBIXG00005010535)
American bison	MODERN SPECIES	3111	MC1R (ENSBBBG00000004068)	FANCA (ENSBBBG00000016425)	ZNF276 (ENSBBBG00000016385)	ENSBBBG00000016371	SPATA2L (ENSBBBG00000016362)	CDK10 (ENSBBBG00000016355)	ENSBBBG00000016308	CHMP1A (ENSBBBG00000016292)	DPEP1 (ENSBBBG00000016248)	ENSBBBG00000016206	RPL13 (ENSBBBG00000016199)	SPG7 (ENSBBBG00000016135)	ENSBBBG00000015874	SLC22A31 (ENSBBBG00000002610)	ACSF3 (ENSBBBG00000015822)	CBFA2T3 (ENSBBBG00000015766) ##22	PABPN1L (ENSBBBG00000015750)	TRAPPC2L (ENSBBBG00000015729)	GALNS (ENSBBBG00000003922)	APRT (ENSBBBG00000015695)	CDT1 (ENSBBBG00000015673)	ENSBBBG00000003908	CTU2 (ENSBBBG00000015652)	RNF166 (ENSBBBG00000015638)	SNAI3 (ENSBBBG00000003436)	MVD (ENSBBBG00000003446)	CYBA (ENSBBBG00000003459)	IL17C (ENSBBBG00000003473)	ENSBBBG00000003897	ENSBBBG00000003895	ENSBBBG00000015589
Caprinae	ANCESTRAL SPECIES	4	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.e.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190.i	ENSGT00530000063823.b.a	ENSGT00390000011116
Goat	MODERN SPECIES	9	SPIRE2 (ENSCHIG00000019449)	FANCA (ENSCHIG00000003612)	ZNF276 (ENSCHIG00000017992)	VPS9D1 (ENSCHIG00000025705)	SPATA2L (ENSCHIG00000017204)	CDK10 (ENSCHIG00000009612)	CHMP1A (ENSCHIG00000025480)	DPEP1 (ENSCHIG00000013192)	CPNE7 (ENSCHIG00000021800)	ENSCHIG00000001441	SPG7 (ENSCHIG00000015886)	ENSCHIG00000014177	SLC22A31 (ENSCHIG00000011227)	CDH15 (ENSCHIG00000019029)	ACSF3 (ENSCHIG00000012787)	CBFA2T3 (ENSCHIG00000024719) ##22	PABPN1L (ENSCHIG00000013987)	TRAPPC2L (ENSCHIG00000022896)	GALNS (ENSCHIG00000014398)	APRT (ENSCHIG00000018530)	CDT1 (ENSCHIG00000012478)	PIEZO1 (ENSCHIG00000021797)	CTU2 (ENSCHIG00000014854)	RNF166 (ENSCHIG00000026588)	SNAI3 (ENSCHIG00000018087)	MVD (ENSCHIG00000019348)	CYBA (ENSCHIG00000014395)	IL17C (ENSCHIG00000023815)	ENSCHIG00000026768	ENSCHIG00000019746	ZFPM1 (ENSCHIG00000010239)
Rambouillet Sheep	MODERN SPECIES	5	TUBB3 (ENSOARG00020003541)	MC1R (ENSOARG00020003524)	TCF25 (ENSOARG00020003444)	ZNF276 (ENSOARG00020003180)	SPATA2L (ENSOARG00020020418)	CDK10 (ENSOARG00020020375)	ENSOARG00020020317	CHMP1A (ENSOARG00020020238)	DPEP1 (ENSOARG00020020121)	CPNE7 (ENSOARG00020019980)	RPL13 (ENSOARG00020019871)	SPG7 (ENSOARG00020016742)	SLC22A31 (ENSOARG00020016342)	CDH15 (ENSOARG00020015069)	ACSF3 (ENSOARG00020014939)	CBFA2T3 (ENSOARG00020014844) ##22	PABPN1L (ENSOARG00020014567)	TRAPPC2L (ENSOARG00020014414)	GALNS (ENSOARG00020014352)	APRT (ENSOARG00020014302)	PIEZO1 (ENSOARG00020013792)	CTU2 (ENSOARG00020013427)	RNF166 (ENSOARG00020013239)	SNAI3 (ENSOARG00020013184)	MVD (ENSOARG00020013121)	CYBA (ENSOARG00020013046)	IL17C (ENSOARG00020012956)	ZC3H18 (ENSOARG00020012411)	ZFPM1 (ENSOARG00020012306)	BANP (ENSOARG00020011813)	CA5A (ENSOARG00020011718)
Siberian musk deer	MODERN SPECIES	1191	FANCA (ENSMMSG00000006271)	ZNF276 (ENSMMSG00000006232)	VPS9D1 (ENSMMSG00000006207)	SPATA2L (ENSMMSG00000006179)	CDK10 (ENSMMSG00000006144)	ENSMMSG00000006124	CHMP1A (ENSMMSG00000006103)	DPEP1 (ENSMMSG00000006071)	CPNE7 (ENSMMSG00000006025)	ENSMMSG00000005970	SPG7 (ENSMMSG00000005867)	ANKRD11 (ENSMMSG00000005681)	SLC22A31 (ENSMMSG00000005632)	CDH15 (ENSMMSG00000005511)	ACSF3 (ENSMMSG00000005451)	CBFA2T3 (ENSMMSG00000005338) ##22	ENSMMSG00000005265	TRAPPC2L (ENSMMSG00000005116)	GALNS (ENSMMSG00000005055)	APRT (ENSMMSG00000005008)	CDT1 (ENSMMSG00000004961)	ENSMMSG00000004917	ENSMMSG00000004869	CTU2 (ENSMMSG00000004779)	RNF166 (ENSMMSG00000010404)	SNAI3 (ENSMMSG00000010386)	MVD (ENSMMSG00000010345)	CYBA (ENSMMSG00000010316)	IL17C (ENSMMSG00000010295)	ZC3H18 (ENSMMSG00000010256)	ENSMMSG00000010221
Camelidae	ANCESTRAL SPECIES	82	ENSGT00390000003058.b.a.b	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Arabian camel	MODERN SPECIES	13	FANCA (ENSCDRG00005019227)	ZNF276 (ENSCDRG00005019848)	VPS9D1 (ENSCDRG00005019863)	SPATA2L (ENSCDRG00005019883)	CDK10 (ENSCDRG00005019898)	CHMP1A (ENSCDRG00005019955)	DPEP1 (ENSCDRG00005019995)	ENSCDRG00005020022	ENSCDRG00005020032	ENSCDRG00005020054	ENSCDRG00005020079	ANKRD11 (ENSCDRG00005020124)	SLC22A31 (ENSCDRG00005020212)	CDH15 (ENSCDRG00005020247)	ACSF3 (ENSCDRG00005020347)	CBFA2T3 (ENSCDRG00005020363) ##22	PABPN1L (ENSCDRG00005020384)	TRAPPC2L (ENSCDRG00005020411)	GALNS (ENSCDRG00005020434)	APRT (ENSCDRG00005020463)	CDT1 (ENSCDRG00005020480)	ENSCDRG00005020494	CTU2 (ENSCDRG00005020514)	RNF166 (ENSCDRG00005020545)	SNAI3 (ENSCDRG00005020562)	MVD (ENSCDRG00005020571)	CYBA (ENSCDRG00005020585)	IL17C (ENSCDRG00005020593)	ZC3H18 (ENSCDRG00005020605)	ZFPM1 (ENSCDRG00005020620)	ZNF469 (ENSCDRG00005020636)
Suina	ANCESTRAL SPECIES	36	ENSGT00390000005563	ENSGT00390000003058.b.a.b	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Pig	MODERN SPECIES	14	SPIRE2 (ENSSSCG00000002635)	FANCA (ENSSSCG00000024687)	ZNF276 (ENSSSCG00000029228)	VPS9D1 (ENSSSCG00000022310)	SPATA2L (ENSSSCG00000029339)	CDK10 (ENSSSCG00000025401)	CHMP1A (ENSSSCG00000023677)	DPEP1 (ENSSSCG00000021971)	ENSSSCG00000051285	ENSSSCG00000031104	ENSSSCG00000024974	SPG7 (ENSSSCG00000024756)	ANKRD11 (ENSSSCG00000039541)	CDH15 (ENSSSCG00000002642)	ACSF3 (ENSSSCG00000023866)	CBFA2T3 (ENSSSCG00000002648) ##22	PABPN1L (ENSSSCG00000036367)	TRAPPC2L (ENSSSCG00000002646)	GALNS (ENSSSCG00000002645)	APRT (ENSSSCG00000002650)	CDT1 (ENSSSCG00000002651)	PIEZO1 (ENSSSCG00000035230)	CTU2 (ENSSSCG00000033920)	RNF166 (ENSSSCG00000034455)	SNAI3 (ENSSSCG00000040145)	MVD (ENSSSCG00000034905)	CYBA (ENSSSCG00000031493)	IL17C (ENSSSCG00000056651)	ZC3H18 (ENSSSCG00000035967)	ZFPM1 (ENSSSCG00000040875)	BANP (ENSSSCG00000020678)
Chacoan peccary	MODERN SPECIES	783																ENSCWAG00000011627 ##22	PABPN1L (ENSCWAG00000011458)	TRAPPC2L (ENSCWAG00000011316)	GALNS (ENSCWAG00000011244)	APRT (ENSCWAG00000011196)	CDT1 (ENSCWAG00000011115)	ENSCWAG00000011053	ENSCWAG00000010980	CTU2 (ENSCWAG00000010641)	RNF166 (ENSCWAG00000010572)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000183176.b.e ##22
Common shrew	MODERN SPECIES	6784																ENSSARG00000002151 ##22
Hedgehog	MODERN SPECIES	2727																ENSEEUG00000013428 ##22
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00980000200525	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00980000200525	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Glires	ANCESTRAL SPECIES	6	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00980000200525	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Lagomorpha	ANCESTRAL SPECIES	354																ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00940000165912	ENSGT00940000157787	ENSGT00390000017259
Pika	MODERN SPECIES	4529																ENSOPRG00000005611 ##22	PABPN1L (ENSOPRG00000005597)	ENSOPRG00000005587	GALNS (ENSOPRG00000005546)	ENSOPRG00000005530
Rodentia	ANCESTRAL SPECIES	8	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00980000200525	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00980000200525	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00980000200525	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887.f	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Eurasian red squirrel	MODERN SPECIES	8	ZNF276 (ENSSVLG00005018741)	VPS9D1 (ENSSVLG00005018934)	SPATA2L (ENSSVLG00005019298)	CDK10 (ENSSVLG00005019348)	SPATA33 (ENSSVLG00005019508)	CHMP1A (ENSSVLG00005019640)	DPEP1 (ENSSVLG00005019718)	CPNE7 (ENSSVLG00005019880)	RPL13 (ENSSVLG00005020235)	ENSSVLG00005020309	SPG7 (ENSSVLG00005020448)	ANKRD11 (ENSSVLG00005021411)	SLC22A31 (ENSSVLG00005021491)	CDH15 (ENSSVLG00005021588)	ACSF3 (ENSSVLG00005021795)	CBFA2T3 (ENSSVLG00005021892) ##22	PABPN1L (ENSSVLG00005022098)	TRAPPC2L (ENSSVLG00005022327)	GALNS (ENSSVLG00005022395)	APRT (ENSSVLG00005022428)	CDT1 (ENSSVLG00005022481)	CTU2 (ENSSVLG00005024007)	RNF166 (ENSSVLG00005024047)	SNAI3 (ENSSVLG00005024096)	MVD (ENSSVLG00005024123)	CYBA (ENSSVLG00005024171)	IL17C (ENSSVLG00005024189)	ZC3H18 (ENSSVLG00005024223)	ZFPM1 (ENSSVLG00005024272)	BANP (ENSSVLG00005024587)	CA5A (ENSSVLG00005024653)
Marmotini	ANCESTRAL SPECIES	17	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d.i	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887.f	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Marmotini_b	ANCESTRAL SPECIES	64	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966.k	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d.i	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887.f	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Arctic ground squirrel	MODERN SPECIES	254	FANCA (ENSUPAG00010016155)	ZNF276 (ENSUPAG00010016143)	VPS9D1 (ENSUPAG00010016108)	SPATA2L (ENSUPAG00010016102)	CDK10 (ENSUPAG00010016080)	SPATA33 (ENSUPAG00010016075)	CHMP1A (ENSUPAG00010016059)	DPEP1 (ENSUPAG00010016045)	CPNE7 (ENSUPAG00010016021)	RPL13 (ENSUPAG00010016011)	SPG7 (ENSUPAG00010015952)	ANKRD11 (ENSUPAG00010015938)	SLC22A31 (ENSUPAG00010015933)	CDH15 (ENSUPAG00010015916)	ACSF3 (ENSUPAG00010015909)	CBFA2T3 (ENSUPAG00010015810) ##22	PABPN1L (ENSUPAG00010015748)	ENSUPAG00010015728	GALNS (ENSUPAG00010015693)	APRT (ENSUPAG00010015685)	CDT1 (ENSUPAG00010015658)	ENSUPAG00010015536	CTU2 (ENSUPAG00010015526)	RNF166 (ENSUPAG00010015514)	SNAI3 (ENSUPAG00010015507)	MVD (ENSUPAG00010015487)	CYBA (ENSUPAG00010015480)	IL17C (ENSUPAG00010015474)	ZC3H18 (ENSUPAG00010015235)	ZFPM1 (ENSUPAG00010015217)	ENSUPAG00010015213
Squirrel	MODERN SPECIES	241	SPIRE2 (ENSSTOG00000008062)	FANCA (ENSSTOG00000013992)	ZNF276 (ENSSTOG00000013982)	VPS9D1 (ENSSTOG00000020938)	SPATA2L (ENSSTOG00000020942)	CDK10 (ENSSTOG00000020862)	ENSSTOG00000011971	CHMP1A (ENSSTOG00000023813)	DPEP1 (ENSSTOG00000011941)	CPNE7 (ENSSTOG00000019772)	RPL13 (ENSSTOG00000011963)	SPG7 (ENSSTOG00000014682)	ENSSTOG00000028622	CDH15 (ENSSTOG00000015320)	ACSF3 (ENSSTOG00000027519)	CBFA2T3 (ENSSTOG00000021485) ##22	PABPN1L (ENSSTOG00000020814)	TRAPPC2L (ENSSTOG00000007271)	GALNS (ENSSTOG00000025556)	APRT (ENSSTOG00000010846)	CDT1 (ENSSTOG00000027593)	PIEZO1 (ENSSTOG00000004005)	CTU2 (ENSSTOG00000003978)	RNF166 (ENSSTOG00000003956)	SNAI3 (ENSSTOG00000021205)	MVD (ENSSTOG00000016332)	CYBA (ENSSTOG00000020835)	IL17C (ENSSTOG00000022407)	ZC3H18 (ENSSTOG00000022431)	ZFPM1 (ENSSTOG00000027139)	BANP (ENSSTOG00000009245)
Alpin marmot	MODERN SPECIES	43	VPS9D1 (ENSMMMG00000008522)	SPATA2L (ENSMMMG00000009267)	CDK10 (ENSMMMG00000009277)	ENSMMMG00000009305	ENSMMMG00000009322	CHMP1A (ENSMMMG00000009328)	DPEP1 (ENSMMMG00000009340)	ENSMMMG00000009365	RPL13 (ENSMMMG00000009384)	SPG7 (ENSMMMG00000009398)	ENSMMMG00000009488	ENSMMMG00000009531	SLC22A31 (ENSMMMG00000009538)	CDH15 (ENSMMMG00000009550)	ACSF3 (ENSMMMG00000009572)	ENSMMMG00000009585 ##22	PABPN1L (ENSMMMG00000009594)	ENSMMMG00000009629	GALNS (ENSMMMG00000009650)	APRT (ENSMMMG00000009691)	CDT1 (ENSMMMG00000009699)	CTU2 (ENSMMMG00000010375)	RNF166 (ENSMMMG00000010714)	SNAI3 (ENSMMMG00000010735)	MVD (ENSMMMG00000010755)	CYBA (ENSMMMG00000010774)	IL17C (ENSMMMG00000010778)	ZC3H18 (ENSMMMG00000010787)	ENSMMMG00000011032	BANP (ENSMMMG00000011037)	CA5A (ENSMMMG00000011084)
Hystricomorpha	ANCESTRAL SPECIES	59	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00390000011116
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	26	ZNF276 (ENSHGLG00000011227)	VPS9D1 (ENSHGLG00000009627)	SPATA2L (ENSHGLG00000010915)	CDK10 (ENSHGLG00000038945)	ENSHGLG00000013125	CHMP1A (ENSHGLG00000036077)	DPEP1 (ENSHGLG00000012033)	ENSHGLG00000042723	RPL13 (ENSHGLG00000010880)	SPG7 (ENSHGLG00000012312)	ENSHGLG00000045549	ENSHGLG00000050558	ENSHGLG00000037687	ENSHGLG00000044301	ENSHGLG00000038565 ##22	ENSHGLG00000032090 ##22	PABPN1L (ENSHGLG00000043697)	TRAPPC2L (ENSHGLG00000010329)	GALNS (ENSHGLG00000011517)	ENSHGLG00000036618	ENSHGLG00000036225	CTU2 (ENSHGLG00000015988)	RNF166 (ENSHGLG00000014545)	SNAI3 (ENSHGLG00000018681)	ENSHGLG00000043954	CYBA (ENSHGLG00000050710)	IL17C (ENSHGLG00000037937)	ENSHGLG00000013309	ENSHGLG00000040718	ENSHGLG00000038403	BANP (ENSHGLG00000009601)
Naked mole-rat female	MODERN SPECIES	26	FANCA (ENSHGLG00000010551)	ZNF276 (ENSHGLG00000011227)	VPS9D1 (ENSHGLG00000009627)	SPATA2L (ENSHGLG00000010915)	CDK10 (ENSHGLG00000038945)	ENSHGLG00000013125	CHMP1A (ENSHGLG00000036077)	DPEP1 (ENSHGLG00000012033)	ENSHGLG00000042723	RPL13 (ENSHGLG00000010880)	SPG7 (ENSHGLG00000012312)	ENSHGLG00000045549	ENSHGLG00000050558	ENSHGLG00000037687	ENSHGLG00000044301	ENSHGLG00000038565 ##22	ENSHGLG00000032090 ##22	PABPN1L (ENSHGLG00000043697)	TRAPPC2L (ENSHGLG00000010329)	GALNS (ENSHGLG00000011517)	ENSHGLG00000036618	ENSHGLG00000036225	CTU2 (ENSHGLG00000015988)	RNF166 (ENSHGLG00000014545)	SNAI3 (ENSHGLG00000018681)	ENSHGLG00000043954	CYBA (ENSHGLG00000050710)	IL17C (ENSHGLG00000037937)	ENSHGLG00000013309	ENSHGLG00000040718	ENSHGLG00000038403
Hystricomorpha_a	ANCESTRAL SPECIES	64	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00390000011116
Guinea pig	MODERN SPECIES	270																CBFA2T3 (ENSCPOG00000023105) ##22	PABPN1L (ENSCPOG00000025951)	TRAPPC2L (ENSCPOG00000002742)	GALNS (ENSCPOG00000021208)	APRT (ENSCPOG00000026373)	CDT1 (ENSCPOG00000023857)	PIEZO1 (ENSCPOG00000008804)	CTU2 (ENSCPOG00000008782)	RNF166 (ENSCPOG00000001798)	SNAI3 (ENSCPOG00000031579)	MVD (ENSCPOG00000020861)	CYBA (ENSCPOG00000001019)	IL17C (ENSCPOG00000033964)	ZC3H18 (ENSCPOG00000031675)	ZFPM1 (ENSCPOG00000024281)
Hystricomorpha_b	ANCESTRAL SPECIES	82	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00390000011116
Long-tailed chinchilla	MODERN SPECIES	248	SPIRE2 (ENSCLAG00000000871)	FANCA (ENSCLAG00000000722)	ZNF276 (ENSCLAG00000001566)	VPS9D1 (ENSCLAG00000001120)	SPATA2L (ENSCLAG00000002771)	CDK10 (ENSCLAG00000002701)	CHMP1A (ENSCLAG00000002472)	DPEP1 (ENSCLAG00000002340)	CPNE7 (ENSCLAG00000001931)	RPL13 (ENSCLAG00000003801)	SPG7 (ENSCLAG00000001470)	ANKRD11 (ENSCLAG00000001054)	ENSCLAG00000001462	CDH15 (ENSCLAG00000001258)	ACSF3 (ENSCLAG00000002959)	CBFA2T3 (ENSCLAG00000000863) ##22	PABPN1L (ENSCLAG00000000704)	TRAPPC2L (ENSCLAG00000000646)	GALNS (ENSCLAG00000002856)	APRT (ENSCLAG00000002341)	CDT1 (ENSCLAG00000002254)	PIEZO1 (ENSCLAG00000001688)	ENSCLAG00000000894	RNF166 (ENSCLAG00000000806)	SNAI3 (ENSCLAG00000000729)	MVD (ENSCLAG00000000836)	CYBA (ENSCLAG00000000711)	IL17C (ENSCLAG00000000670)	ZC3H18 (ENSCLAG00000000600)	ENSCLAG00000001012	BANP (ENSCLAG00000000895)
Degu	MODERN SPECIES	256	VPS9D1 (ENSODEG00000004436)	SPATA2L (ENSODEG00000004672)	CDK10 (ENSODEG00000004698)	ENSODEG00000004794	CHMP1A (ENSODEG00000004817)	DPEP1 (ENSODEG00000004853)	ENSODEG00000004875	CPNE7 (ENSODEG00000004085)	ENSODEG00000004235	SPG7 (ENSODEG00000004303)	ENSODEG00000019057	ANKRD11 (ENSODEG00000004490)	CDH15 (ENSODEG00000004669)	ACSF3 (ENSODEG00000004369)	ENSODEG00000004407	CBFA2T3 (ENSODEG00000004615) ##22	PABPN1L (ENSODEG00000004649)	ENSODEG00000004673	GALNS (ENSODEG00000004721)	ENSODEG00000004857	CDT1 (ENSODEG00000004905)	PIEZO1 (ENSODEG00000005089)	CTU2 (ENSODEG00000004093)	RNF166 (ENSODEG00000004145)	SNAI3 (ENSODEG00000004154)	MVD (ENSODEG00000004168)	CYBA (ENSODEG00000004204)	IL17C (ENSODEG00000004311)	ZC3H18 (ENSODEG00000004401)	ZFPM1 (ENSODEG00000004547)	ENSODEG00000004574
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Kangaroo rat	MODERN SPECIES	533	ENSDORG00000029115	Fanca (ENSDORG00000012259)	ENSDORG00000012257	Vps9d1 (ENSDORG00000014825)	Cdk10 (ENSDORG00000015084)	ENSDORG00000027254	Chmp1a (ENSDORG00000023731)	Dpep1 (ENSDORG00000008048)	Sult5a1 (ENSDORG00000025066)	Cpne7 (ENSDORG00000005124)	Rpl13 (ENSDORG00000028330)	Spg7 (ENSDORG00000005698)	ENSDORG00000023552	Cdh15 (ENSDORG00000025114)	Acsf3 (ENSDORG00000012903)	Cbfa2t3 (ENSDORG00000015966) ##22
Myomorpha	ANCESTRAL SPECIES	22	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Muroidea	ANCESTRAL SPECIES	19	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818.qb.b.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818.qb.b.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a.i	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818.qb.b.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a.i	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818.qb.b.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Chinese hamster chok1gshd	MODERN SPECIES	112	Zfp276 (ENSCGRG00001022243)	Vps9d1 (ENSCGRG00001021065)	Spata2l (ENSCGRG00001001719)	Cdk10 (ENSCGRG00001014991)	ENSCGRG00001021128	Chmp1a (ENSCGRG00001021434)	Dpep1 (ENSCGRG00001023251)	Sult5a1 (ENSCGRG00001017454)	Cpne7 (ENSCGRG00001015474)	Rpl13 (ENSCGRG00001022563)	Spg7 (ENSCGRG00001021214)	ENSCGRG00001011924	Ankrd11 (ENSCGRG00001017994)	Cdh15 (ENSCGRG00001014367)	Acsf3 (ENSCGRG00001018446)	Cbfa2t3 (ENSCGRG00001006537) ##22	Pabpn1l (ENSCGRG00001013211)	Trappc2l (ENSCGRG00001024305)	Galns (ENSCGRG00001009443)	APRT (ENSCGRG00001009398)	Cdt1 (ENSCGRG00001016566)	Piezo1 (ENSCGRG00001016495)	Ctu2 (ENSCGRG00001018738)	Rnf166 (ENSCGRG00001013400)	Snai3 (ENSCGRG00001011389)	Mvd (ENSCGRG00001021902)	Cyba (ENSCGRG00001001311)	Il17c (ENSCGRG00001024519)	Zc3h18 (ENSCGRG00001019104)	Trhr2 (ENSCGRG00001001827)	Zfpm1 (ENSCGRG00001021400)
Golden Hamster	MODERN SPECIES	654	Fanca (ENSMAUG00000004194)	Zfp276 (ENSMAUG00000017387)	Vps9d1 (ENSMAUG00000021021)	Spata2l (ENSMAUG00000012181)	Cdk10 (ENSMAUG00000003054)	ENSMAUG00000021251	Chmp1a (ENSMAUG00000020494)	Dpep1 (ENSMAUG00000018227)	Sult5a1 (ENSMAUG00000008375)	Cpne7 (ENSMAUG00000021382)	ENSMAUG00000020543	Spg7 (ENSMAUG00000017872)	ENSMAUG00000009818	Cdh15 (ENSMAUG00000018802)	Acsf3 (ENSMAUG00000014775)	Cbfa2t3 (ENSMAUG00000016035) ##22	Pabpn1l (ENSMAUG00000014032)	Trappc2l (ENSMAUG00000018071)	Galns (ENSMAUG00000021453)	Aprt (ENSMAUG00000021299)	Cdt1 (ENSMAUG00000022237)	Piezo1 (ENSMAUG00000021717)	Ctu2 (ENSMAUG00000020048)	Rnf166 (ENSMAUG00000018616)	Snai3 (ENSMAUG00000001685)	Mvd (ENSMAUG00000020072)	Cyba (ENSMAUG00000020568)	Il17c (ENSMAUG00000010465)	Zc3h18 (ENSMAUG00000015828)	Trhr2 (ENSMAUG00000018412)	Zfpm1 (ENSMAUG00000017930)
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a.i	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818.qb.b.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Northern American deer mouse	MODERN SPECIES	18	Fanca (ENSPEMG00000017722)	ENSPEMG00000025161	Spata2l (ENSPEMG00000027370)	Cdk10 (ENSPEMG00000012841)	ENSPEMG00000018787	Chmp1a (ENSPEMG00000013566)	Dpep1 (ENSPEMG00000012103)	Sult5a1 (ENSPEMG00000007963)	Cpne7 (ENSPEMG00000013758)	Rpl13 (ENSPEMG00000010342)	Spg7 (ENSPEMG00000016642)	ENSPEMG00000027773	Ankrd11 (ENSPEMG00000015479)	Cdh15 (ENSPEMG00000018346)	Acsf3 (ENSPEMG00000014608)	Cbfa2t3 (ENSPEMG00000008145) ##22	Pabpn1l (ENSPEMG00000016624)	Trappc2l (ENSPEMG00000026189)	Galns (ENSPEMG00000018911)	Aprt (ENSPEMG00000007366)	Cdt1 (ENSPEMG00000010002)	Ctu2 (ENSPEMG00000016552)	Rnf166 (ENSPEMG00000018748)	Snai3 (ENSPEMG00000029324)	Mvd (ENSPEMG00000018457)	Cyba (ENSPEMG00000007932)	Il17c (ENSPEMG00000019129)	Zc3h18 (ENSPEMG00000001663)	Trhr2 (ENSPEMG00000009899)	Zfpm1 (ENSPEMG00000000468)	Zfp469 (ENSPEMG00000029136)
Prairie vole	MODERN SPECIES	12	Zfp276 (ENSMOCG00000005818)	ENSMOCG00000022018	Spata2l (ENSMOCG00000001425)	Cdk10 (ENSMOCG00000013570)	ENSMOCG00000019950	ENSMOCG00000002553	ENSMOCG00000006103	Dpep1 (ENSMOCG00000003603)	Sult5a1 (ENSMOCG00000018322)	Cpne7 (ENSMOCG00000016113)	ENSMOCG00000009058	Spg7 (ENSMOCG00000022814)	ENSMOCG00000003172	Cdh15 (ENSMOCG00000003048)	Acsf3 (ENSMOCG00000016996)	Cbfa2t3 (ENSMOCG00000021007) ##22	Pabpn1l (ENSMOCG00000007955)	ENSMOCG00000017231	Galns (ENSMOCG00000009269)	Aprt (ENSMOCG00000000737)	Cdt1 (ENSMOCG00000008713)	Piezo1 (ENSMOCG00000008460)	Ctu2 (ENSMOCG00000004755)	Rnf166 (ENSMOCG00000018742)	Snai3 (ENSMOCG00000003536)	Mvd (ENSMOCG00000022955)	Cyba (ENSMOCG00000015857)	Il17c (ENSMOCG00000022236)	Zc3h18 (ENSMOCG00000018824)	Trhr2 (ENSMOCG00000009584)	Zfpm1 (ENSMOCG00000001709)
Murinae	ANCESTRAL SPECIES	15	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818.qb.b.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Mus	ANCESTRAL SPECIES	6	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818.qb.b.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Mus_A	ANCESTRAL SPECIES	8	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818.qb.b.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Mus_B	ANCESTRAL SPECIES	6	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818.qb.b.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
Mouse	MODERN SPECIES	17	Fanca (ENSMUSG00000032815)	Zfp276 (ENSMUSG00000001065)	Vps9d1 (ENSMUSG00000001062)	Spata2l (ENSMUSG00000033594)	Cdk10 (ENSMUSG00000033862)	Spata33 (ENSMUSG00000048478)	Chmp1a (ENSMUSG00000000743)	Dpep1 (ENSMUSG00000019278)	Sult5a1 (ENSMUSG00000000739)	Cpne7 (ENSMUSG00000034796)	Rpl13 (ENSMUSG00000000740)	Spg7 (ENSMUSG00000000738)	Ankrd11 (ENSMUSG00000035569)	Cdh15 (ENSMUSG00000031962)	Acsf3 (ENSMUSG00000015016)	Cbfa2t3 (ENSMUSG00000006362) ##22	Pabpn1l (ENSMUSG00000069867)	Trappc2l (ENSMUSG00000015013)	Galns (ENSMUSG00000015027)	Aprt (ENSMUSG00000006589)	Cdt1 (ENSMUSG00000006585)	Piezo1 (ENSMUSG00000014444)	Ctu2 (ENSMUSG00000049482)	Rnf166 (ENSMUSG00000014470)	Snai3 (ENSMUSG00000006587)	Mvd (ENSMUSG00000006517)	Cyba (ENSMUSG00000006519)	Il17c (ENSMUSG00000046108)	Zc3h18 (ENSMUSG00000017478)	Trhr2 (ENSMUSG00000039079)	Zfpm1 (ENSMUSG00000049577)
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000160442	ENSGT00390000007818.qb.b.a	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.d	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a
spretus	MODERN SPECIES	17	Fanca (MGP_SPRETEiJ_G0032804)	Zfp276 (MGP_SPRETEiJ_G0032803)	Vps9d1 (MGP_SPRETEiJ_G0032802)	Spata2l (MGP_SPRETEiJ_G0032801)	MGP_SPRETEiJ_G0032800	MGP_SPRETEiJ_G0032799	Chmp1a (MGP_SPRETEiJ_G0032798)	Dpep1 (MGP_SPRETEiJ_G0032797)	Sult5a1 (MGP_SPRETEiJ_G0032796)	Cpne7 (MGP_SPRETEiJ_G0032795)	MGP_SPRETEiJ_G0032794	Spg7 (MGP_SPRETEiJ_G0032793)	Ankrd11 (MGP_SPRETEiJ_G0032792)	Cdh15 (MGP_SPRETEiJ_G0032791)	Acsf3 (MGP_SPRETEiJ_G0032790)	Cbfa2t3 (MGP_SPRETEiJ_G0032789) ##22	Pabpn1l (MGP_SPRETEiJ_G0032788)	Trappc2l (MGP_SPRETEiJ_G0032787)	Galns (MGP_SPRETEiJ_G0032786)	Aprt (MGP_SPRETEiJ_G0032785)	Cdt1 (MGP_SPRETEiJ_G0032784)	Piezo1 (MGP_SPRETEiJ_G0032783)	Ctu2 (MGP_SPRETEiJ_G0032782)	Rnf166 (MGP_SPRETEiJ_G0032781)	Snai3 (MGP_SPRETEiJ_G0032780)	Mvd (MGP_SPRETEiJ_G0032779)	Cyba (MGP_SPRETEiJ_G0032778)	Il17c (MGP_SPRETEiJ_G0032777)	Zc3h18 (MGP_SPRETEiJ_G0032776)	Trhr2 (MGP_SPRETEiJ_G0032775)	Zfpm1 (MGP_SPRETEiJ_G0032774)
Steppe mouse	MODERN SPECIES	45	Fanca (ENSMSIG00000014162)	Zfp276 (ENSMSIG00000014287)	Vps9d1 (ENSMSIG00000014322)	Spata2l (ENSMSIG00000014405)	ENSMSIG00000014419	ENSMSIG00000014457	ENSMSIG00000014477	Dpep1 (ENSMSIG00000014518)	ENSMSIG00000014571	Cpne7 (ENSMSIG00000014589)	ENSMSIG00000014631	Spg7 (ENSMSIG00000014655)	Ankrd11 (ENSMSIG00000014772)	Cdh15 (ENSMSIG00000014939)	Acsf3 (ENSMSIG00000015004)	Cbfa2t3 (ENSMSIG00000015080) ##22	ENSMSIG00000015156	Pabpn1l (ENSMSIG00000015174)	Trappc2l (ENSMSIG00000015198)	Galns (ENSMSIG00000015212)	ENSMSIG00000015261	Aprt (ENSMSIG00000015264)	Cdt1 (ENSMSIG00000015304)	Piezo1 (ENSMSIG00000015362)	Ctu2 (ENSMSIG00000015427)	Rnf166 (ENSMSIG00000015462)	Snai3 (ENSMSIG00000015478)	Mvd (ENSMSIG00000015493)	Cyba (ENSMSIG00000015551)	Il17c (ENSMSIG00000015592)	Zc3h18 (ENSMSIG00000015603)
Ryukyu mouse	MODERN SPECIES	17	Fanca (MGP_CAROLIEiJ_G0031686)	Zfp276 (MGP_CAROLIEiJ_G0031685)	Vps9d1 (MGP_CAROLIEiJ_G0031684)	Spata2l (MGP_CAROLIEiJ_G0031683)	Cdk10 (MGP_CAROLIEiJ_G0031682)	MGP_CAROLIEiJ_G0031681	Chmp1a (MGP_CAROLIEiJ_G0031680)	Dpep1 (MGP_CAROLIEiJ_G0031679)	Sult5a1 (MGP_CAROLIEiJ_G0031678)	Cpne7 (MGP_CAROLIEiJ_G0031677)	MGP_CAROLIEiJ_G0031676	Spg7 (MGP_CAROLIEiJ_G0031675)	Ankrd11 (MGP_CAROLIEiJ_G0031674)	Cdh15 (MGP_CAROLIEiJ_G0031673)	Acsf3 (MGP_CAROLIEiJ_G0031672)	Cbfa2t3 (MGP_CAROLIEiJ_G0031671) ##22	Pabpn1l (MGP_CAROLIEiJ_G0031670)	Trappc2l (MGP_CAROLIEiJ_G0031669)	Galns (MGP_CAROLIEiJ_G0031668)	Aprt (MGP_CAROLIEiJ_G0031667)	Cdt1 (MGP_CAROLIEiJ_G0031666)	Piezo1 (MGP_CAROLIEiJ_G0031665)	Ctu2 (MGP_CAROLIEiJ_G0031664)	Rnf166 (MGP_CAROLIEiJ_G0031663)	Snai3 (MGP_CAROLIEiJ_G0031662)	Mvd (MGP_CAROLIEiJ_G0031661)	Cyba (MGP_CAROLIEiJ_G0031660)	Il17c (MGP_CAROLIEiJ_G0031659)	Zc3h18 (MGP_CAROLIEiJ_G0031658)	Trhr2 (MGP_CAROLIEiJ_G0031657)	Zfpm1 (MGP_CAROLIEiJ_G0031656)
Shrew mouse	MODERN SPECIES	12	Fanca (MGP_PahariEiJ_G0023284)	Zfp276 (MGP_PahariEiJ_G0023283)	Vps9d1 (MGP_PahariEiJ_G0023282)	Spata2l (MGP_PahariEiJ_G0023281)	Cdk10 (MGP_PahariEiJ_G0023280)	MGP_PahariEiJ_G0023279	Chmp1a (MGP_PahariEiJ_G0023278)	Dpep1 (MGP_PahariEiJ_G0023277)	MGP_PahariEiJ_G0023276	Cpne7 (MGP_PahariEiJ_G0023275)	MGP_PahariEiJ_G0023274	Spg7 (MGP_PahariEiJ_G0023273)	Ankrd11 (MGP_PahariEiJ_G0023272)	Cdh15 (MGP_PahariEiJ_G0023271)	Acsf3 (MGP_PahariEiJ_G0023270)	Cbfa2t3 (MGP_PahariEiJ_G0023269) ##22	Pabpn1l (MGP_PahariEiJ_G0023268)	Trappc2l (MGP_PahariEiJ_G0023267)	Galns (MGP_PahariEiJ_G0023266)	Aprt (MGP_PahariEiJ_G0023265)	Cdt1 (MGP_PahariEiJ_G0023264)	Piezo1 (MGP_PahariEiJ_G0023263)	Ctu2 (MGP_PahariEiJ_G0023262)	Rnf166 (MGP_PahariEiJ_G0023261)	Snai3 (MGP_PahariEiJ_G0023260)	Mvd (MGP_PahariEiJ_G0023259)	Cyba (MGP_PahariEiJ_G0023258)	Il17c (MGP_PahariEiJ_G0023257)	Zc3h18 (MGP_PahariEiJ_G0023256)	Trhr2 (MGP_PahariEiJ_G0023255)	Zfpm1 (MGP_PahariEiJ_G0023254)
Rat	MODERN SPECIES	10	Fanca (ENSRNOG00000016706)	Zfp276 (ENSRNOG00000016631)	Vps9d1 (ENSRNOG00000028904)	Spata2L (ENSRNOG00000016167)	Cdk10 (ENSRNOG00000016088)	Spata33 (ENSRNOG00000038239)	Chmp1a (ENSRNOG00000016001)	Dpep1 (ENSRNOG00000015880)	Sult5a1 (ENSRNOG00000015695)	Cpne7 (ENSRNOG00000015397)	Rpl13 (ENSRNOG00000015335)	Spg7 (ENSRNOG00000015150)	Ankrd11 (ENSRNOG00000027906)	Cdh15 (ENSRNOG00000027954)	Acsf3 (ENSRNOG00000015077)	Cbfa2t3 (ENSRNOG00000014723) ##22	Pabpn1l (ENSRNOG00000029558)	Trappc2l (ENSRNOG00000014581)	Galns (ENSRNOG00000014461)	Aprt (ENSRNOG00000014405)	Cdt1 (ENSRNOG00000013970)	Piezo1 (ENSRNOG00000056786)	Ctu2 (ENSRNOG00000051531)	Rnf166 (ENSRNOG00000013777)	Snai3 (ENSRNOG00000013586)	Mvd (ENSRNOG00000013376)	Cyba (ENSRNOG00000013014)	Il17c (ENSRNOG00000013007)	Zc3h18 (ENSRNOG00000028501)	Mlnr (ENSRNOG00000012789)	Zfpm1 (ENSRNOG00000043077)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1108							Sult5a1 (ENSNGAG00000022110)	Cpne7 (ENSNGAG00000023423)	Rpl13 (ENSNGAG00000018467)	Spg7 (ENSNGAG00000020726)	ENSNGAG00000024166	ENSNGAG00000008560	Ankrd11 (ENSNGAG00000015118)	Cdh15 (ENSNGAG00000016069)	Acsf3 (ENSNGAG00000022957)	Cbfa2t3 (ENSNGAG00000016320) ##22	Pabpn1l (ENSNGAG00000023992)	ENSNGAG00000024083	Galns (ENSNGAG00000022107)	ENSNGAG00000016112	Cdt1 (ENSNGAG00000022315)	Piezo1 (ENSNGAG00000017101)	Ctu2 (ENSNGAG00000023366)	Rnf166 (ENSNGAG00000021980)	Snai3 (ENSNGAG00000023039)	Mvd (ENSNGAG00000023194)	Cyba (ENSNGAG00000009875)	Il17c (ENSNGAG00000013943)	Zc3h18 (ENSNGAG00000011518)	Trhr2 (ENSNGAG00000021694)	Zfpm1 (ENSNGAG00000015027)
Lesser Egyptian jerboa	MODERN SPECIES	127										Cpne7 (ENSJJAG00000000879)	Rpl13 (ENSJJAG00000014012)	Spg7 (ENSJJAG00000008061)	ENSJJAG00000015097	Cdh15 (ENSJJAG00000005187)	Acsf3 (ENSJJAG00000016704)	Cbfa2t3 (ENSJJAG00000023795) ##22	Pabpn1l (ENSJJAG00000006433)	ENSJJAG00000017894	Trappc2l (ENSJJAG00000017487)	Galns (ENSJJAG00000011252)	Aprt (ENSJJAG00000018585)	Cdt1 (ENSJJAG00000023219)	Piezo1 (ENSJJAG00000014795)	Ctu2 (ENSJJAG00000023678)	Rnf166 (ENSJJAG00000022145)	Snai3 (ENSJJAG00000019934)	Mvd (ENSJJAG00000024235)	Cyba (ENSJJAG00000001098)	Il17c (ENSJJAG00000021149)	Zc3h18 (ENSJJAG00000024122)	Trhr2 (ENSJJAG00000000896)
Primates	ANCESTRAL SPECIES	21	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Haplorrhini	ANCESTRAL SPECIES	21	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Simiiformes	ANCESTRAL SPECIES	21	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00910000147699	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00410000028565	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00910000147699	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00410000028565	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190
Hominidae	ANCESTRAL SPECIES	9	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00910000147699	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00410000028565	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00550000076317	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	19	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00910000147699	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00410000028565	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00550000076317	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887
Homo/Pan group	ANCESTRAL SPECIES	19	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00910000147699	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00410000028565	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00550000076317	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887
Pan	ANCESTRAL SPECIES	19	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.gb	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00910000147699	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00410000028565	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00550000076317	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887
Bonobo	MODERN SPECIES	7	ZNF276 (ENSPPAG00000030560)	VPS9D1 (ENSPPAG00000043316)	SPATA2L (ENSPPAG00000027459)	CDK10 (ENSPPAG00000028904)	SPATA33 (ENSPPAG00000037171)	CHMP1A (ENSPPAG00000031215)	DPEP1 (ENSPPAG00000031919)	CPNE7 (ENSPPAG00000032990)	ENSPPAG00000029415	SPG7 (ENSPPAG00000030811)	ANKRD11 (ENSPPAG00000031546)	ZNF778 (ENSPPAG00000027614)	ENSPPAG00000035231	CDH15 (ENSPPAG00000027473)	ACSF3 (ENSPPAG00000034173)	CBFA2T3 (ENSPPAG00000033445) ##22	PABPN1L (ENSPPAG00000028866)	ENSPPAG00000030449	ENSPPAG00000028211	GALNS (ENSPPAG00000026750)	APRT (ENSPPAG00000005769)	CDT1 (ENSPPAG00000035604)	ENSPPAG00000021902	PIEZO1 (ENSPPAG00000033313)	CTU2 (ENSPPAG00000027154)	ENSPPAG00000037295	ENSPPAG00000003732	SNAI3 (ENSPPAG00000043301)	MVD (ENSPPAG00000025490)	ENSPPAG00000017054	IL17C (ENSPPAG00000002106)
Chimpanzee	MODERN SPECIES	7	SPATA2L (ENSPTRG00000008486)	ENSPTRG00000048139	SPATA33 (ENSPTRG00000043059)	CHMP1A (ENSPTRG00000008483)	DPEP1 (ENSPTRG00000008482)	ENSPTRG00000046416	ENSPTRG00000043071	RPL13 (ENSPTRG00000008480)	SPG7 (ENSPTRG00000039136)	ENSPTRG00000052780	ANKRD11 (ENSPTRG00000008476)	ZNF778 (ENSPTRG00000008475)	ENSPTRG00000049767	CDH15 (ENSPTRG00000008473)	ACSF3 (ENSPTRG00000008471)	CBFA2T3 (ENSPTRG00000008470) ##22	PABPN1L (ENSPTRG00000031120)	TRAPPC2L (ENSPTRG00000051923)	GALNS (ENSPTRG00000008467)	APRT (ENSPTRG00000008466)	CDT1 (ENSPTRG00000008465)	ENSPTRG00000008464	PIEZO1 (ENSPTRG00000008463)	CTU2 (ENSPTRG00000008462)	RNF166 (ENSPTRG00000008461)	ENSPTRG00000048535	SNAI3 (ENSPTRG00000008460)	MVD (ENSPTRG00000008459)	CYBA (ENSPTRG00000008458)	IL17C (ENSPTRG00000008457)	ZC3H18 (ENSPTRG00000008456)
Human	MODERN SPECIES	7	VPS9D1 (ENSG00000075399)	SPATA2L (ENSG00000158792)	CDK10 (ENSG00000185324)	SPATA33 (ENSG00000167523)	CHMP1A (ENSG00000131165)	DPEP1 (ENSG00000015413)	CPNE7 (ENSG00000178773)	RPL13 (ENSG00000167526)	SPG7 (ENSG00000197912)	ENSG00000288715	ANKRD11 (ENSG00000167522)	ZNF778 (ENSG00000170100)	SLC22A31 (ENSG00000259803)	CDH15 (ENSG00000129910)	ACSF3 (ENSG00000176715)	CBFA2T3 (ENSG00000129993) ##22	PABPN1L (ENSG00000205022)	TRAPPC2L (ENSG00000167515)	GALNS (ENSG00000141012)	APRT (ENSG00000198931)	CDT1 (ENSG00000167513)	PIEZO1 (ENSG00000103335)	CTU2 (ENSG00000174177)	RNF166 (ENSG00000158717)	SNAI3 (ENSG00000185669)	MVD (ENSG00000167508)	CYBA (ENSG00000051523)	IL17C (ENSG00000124391)	ZC3H18 (ENSG00000158545)	ZFPM1 (ENSG00000179588)	ZNF469 (ENSG00000225614)
Gorilla	MODERN SPECIES	7	ZNF276 (ENSGGOG00000010960)	VPS9D1 (ENSGGOG00000010945)	SPATA2L (ENSGGOG00000010942)	CDK10 (ENSGGOG00000010935)	SPATA33 (ENSGGOG00000041280)	CHMP1A (ENSGGOG00000012213)	DPEP1 (ENSGGOG00000006148)	CPNE7 (ENSGGOG00000009896)	ENSGGOG00000025427	SPG7 (ENSGGOG00000016119)	ANKRD11 (ENSGGOG00000015490)	ZNF778 (ENSGGOG00000003326)	SLC22A31 (ENSGGOG00000011540)	CDH15 (ENSGGOG00000011529)	ACSF3 (ENSGGOG00000016782)	CBFA2T3 (ENSGGOG00000012681) ##22	PABPN1L (ENSGGOG00000012670)	ENSGGOG00000012662	ENSGGOG00000036924	GALNS (ENSGGOG00000012641)	APRT (ENSGGOG00000012638)	CDT1 (ENSGGOG00000012628)	PIEZO1 (ENSGGOG00000012587)	CTU2 (ENSGGOG00000012573)	RNF166 (ENSGGOG00000012566)	ENSGGOG00000042408	SNAI3 (ENSGGOG00000012559)	MVD (ENSGGOG00000012548)	ENSGGOG00000012534	IL17C (ENSGGOG00000012533)	ZC3H18 (ENSGGOG00000012514)
Orangutan	MODERN SPECIES	7	ZNF276 (ENSPPYG00000007673)	VPS9D1 (ENSPPYG00000007672)	SPATA2L (ENSPPYG00000007671)	CDK10 (ENSPPYG00000007669)	SPATA33 (ENSPPYG00000030101)	CHMP1A (ENSPPYG00000007667)	DPEP1 (ENSPPYG00000007666)	CPNE7 (ENSPPYG00000031573)	RPL13 (ENSPPYG00000033841)	SPG7 (ENSPPYG00000007665)	ANKRD11 (ENSPPYG00000007663)	ZNF778 (ENSPPYG00000033531)	ENSPPYG00000007661	CDH15 (ENSPPYG00000007660)	ACSF3 (ENSPPYG00000007659)	CBFA2T3 (ENSPPYG00000007656) ##22	PABPN1L (ENSPPYG00000007655)	TRAPPC2L (ENSPPYG00000038557)	GALNS (ENSPPYG00000007653)	APRT (ENSPPYG00000007652)	CDT1 (ENSPPYG00000007651)	ENSPPYG00000007650	ENSPPYG00000040220	CTU2 (ENSPPYG00000007646)	RNF166 (ENSPPYG00000007645)	ENSPPYG00000007644	SNAI3 (ENSPPYG00000007643)	MVD (ENSPPYG00000007642)	ENSPPYG00000007641	IL17C (ENSPPYG00000007640)	ZC3H18 (ENSPPYG00000007639)
Gibbon	MODERN SPECIES	11	ZNF276 (ENSNLEG00000015731)	VPS9D1 (ENSNLEG00000015847)	SPATA2L (ENSNLEG00000015844)	CDK10 (ENSNLEG00000015832)	SPATA33 (ENSNLEG00000027894)	CHMP1A (ENSNLEG00000028612)	ENSNLEG00000015822	CPNE7 (ENSNLEG00000015816)	RPL13 (ENSNLEG00000015774)	SPG7 (ENSNLEG00000015719)	ANKRD11 (ENSNLEG00000015714)	ENSNLEG00000015708	ENSNLEG00000015703	ENSNLEG00000035526	ENSNLEG00000015698	CBFA2T3 (ENSNLEG00000015667) ##22	ENSNLEG00000015663	ENSNLEG00000029365	ENSNLEG00000029183	GALNS (ENSNLEG00000015633)	APRT (ENSNLEG00000015615)	CDT1 (ENSNLEG00000015601)	ENSNLEG00000000652	PIEZO1 (ENSNLEG00000000624)	ENSNLEG00000000604	RNF166 (ENSNLEG00000000603)	SNAI3 (ENSNLEG00000000595)	MVD (ENSNLEG00000000590)	ENSNLEG00000034992	IL17C (ENSNLEG00000000566)	ZC3H18 (ENSNLEG00000000496)
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A.e	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00910000147699	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00410000028565	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A.e	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00910000147699	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00410000028565	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.z	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A.e	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00910000147699	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00410000028565	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190
Macaca	ANCESTRAL SPECIES	8	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.z	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A.e	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Macaca_a	ANCESTRAL SPECIES	14	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.z	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A.e	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.a	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Rhesus	MODERN SPECIES	12	ZNF276 (ENSMMUG00000002506)	VPS9D1 (ENSMMUG00000002505)	SPATA2L (ENSMMUG00000002504)	CDK10 (ENSMMUG00000002503)	SPATA33 (ENSMMUG00000014908)	DPEP1 (ENSMMUG00000014910)	CPNE7 (ENSMMUG00000029064)	RPL13 (ENSMMUG00000017928)	SPG7 (ENSMMUG00000017920)	ANKRD11 (ENSMMUG00000017161)	ZNF778 (ENSMMUG00000037464)	SLC22A31 (ENSMMUG00000012102)	CDH15 (ENSMMUG00000012100)	ACSF3 (ENSMMUG00000023245)	ENSMMUG00000063614	CBFA2T3 (ENSMMUG00000063909) ##22	PABPN1L (ENSMMUG00000012438)	TRAPPC2L (ENSMMUG00000053471)	GALNS (ENSMMUG00000012430)	CDT1 (ENSMMUG00000013823)	ENSMMUG00000061015	PIEZO1 (ENSMMUG00000007254)	CTU2 (ENSMMUG00000007251)	RNF166 (ENSMMUG00000029068)	SNAI3 (ENSMMUG00000008716)	MVD (ENSMMUG00000014326)	CYBA (ENSMMUG00000053929)	IL17C (ENSMMUG00000014324)	ZC3H18 (ENSMMUG00000014323)	ENSMMUG00000052589	ZFPM1 (ENSMMUG00000053494)
Crab-eating macaque	MODERN SPECIES	12	ZNF276 (ENSMFAG00000037319)	VPS9D1 (ENSMFAG00000032869)	SPATA2L (ENSMFAG00000041067)	CDK10 (ENSMFAG00000039303)	SPATA33 (ENSMFAG00000043387)	CHMP1A (ENSMFAG00000038083)	DPEP1 (ENSMFAG00000031442)	CPNE7 (ENSMFAG00000038027)	RPL13 (ENSMFAG00000027717)	SPG7 (ENSMFAG00000001315)	ANKRD11 (ENSMFAG00000040263)	ZNF778 (ENSMFAG00000032442)	SLC22A31 (ENSMFAG00000031390)	CDH15 (ENSMFAG00000024502)	ACSF3 (ENSMFAG00000044180)	CBFA2T3 (ENSMFAG00000003781) ##22	PABPN1L (ENSMFAG00000002924)	ENSMFAG00000003395	GALNS (ENSMFAG00000041824)	APRT (ENSMFAG00000003499)	CDT1 (ENSMFAG00000030941)	ENSMFAG00000039545	SNAI3 (ENSMFAG00000063008)	MVD (ENSMFAG00000000591)	ENSMFAG00000048014	IL17C (ENSMFAG00000036423)	ZC3H18 (ENSMFAG00000002975)	ENSMFAG00000036335	ENSMFAG00000061038	BANP (ENSMFAG00000037628)	CA5A (ENSMFAG00000054520)
Pig-tailed macaque	MODERN SPECIES	150	ZNF276 (ENSMNEG00000043235)	VPS9D1 (ENSMNEG00000032295)	SPATA2L (ENSMNEG00000043570)	CDK10 (ENSMNEG00000020078)	SPATA33 (ENSMNEG00000035198)	CHMP1A (ENSMNEG00000034383)	DPEP1 (ENSMNEG00000039591)	CPNE7 (ENSMNEG00000029884)	ENSMNEG00000033097	SPG7 (ENSMNEG00000040301)	ANKRD11 (ENSMNEG00000035799)	ZNF778 (ENSMNEG00000040218)	SLC22A31 (ENSMNEG00000045155)	CDH15 (ENSMNEG00000031701)	ACSF3 (ENSMNEG00000029172)	CBFA2T3 (ENSMNEG00000035238) ##22	PABPN1L (ENSMNEG00000044808)	ENSMNEG00000043036	GALNS (ENSMNEG00000036303)	APRT (ENSMNEG00000044786)	CDT1 (ENSMNEG00000041221)	PIEZO1 (ENSMNEG00000035161)	CTU2 (ENSMNEG00000040954)	RNF166 (ENSMNEG00000044549)	SNAI3 (ENSMNEG00000045515)	MVD (ENSMNEG00000039710)	CYBA (ENSMNEG00000040513)	IL17C (ENSMNEG00000035604)	ZC3H18 (ENSMNEG00000033827)	ZFPM1 (ENSMNEG00000041734)	ZNF469 (ENSMNEG00000037291)
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.z	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A.e	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00910000147699	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00410000028565	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190
Olive baboon	MODERN SPECIES	9	ZNF276 (ENSPANG00000022228)	VPS9D1 (ENSPANG00000015090)	SPATA2L (ENSPANG00000021929)	CDK10 (ENSPANG00000021928)	SPATA33 (ENSPANG00000026304)	CHMP1A (ENSPANG00000006098)	ENSPANG00000008151	ENSPANG00000046357	RPL13 (ENSPANG00000031667)	SPG7 (ENSPANG00000023482)	ANKRD11 (ENSPANG00000015287)	ZNF778 (ENSPANG00000025453)	SLC22A31 (ENSPANG00000008152)	CDH15 (ENSPANG00000019548)	ACSF3 (ENSPANG00000021831)	CBFA2T3 (ENSPANG00000018840) ##22	PABPN1L (ENSPANG00000026039)	TRAPPC2L (ENSPANG00000010487)	GALNS (ENSPANG00000018643)	ENSPANG00000050925	ENSPANG00000008153	CDT1 (ENSPANG00000018841)	ENSPANG00000021833	CTU2 (ENSPANG00000008403)	RNF166 (ENSPANG00000000510)	SNAI3 (ENSPANG00000000509)	MVD (ENSPANG00000022916)	CYBA (ENSPANG00000032558)	IL17C (ENSPANG00000023121)	ZC3H18 (ENSPANG00000024391)	ENSPANG00000005497
Cercopithecinae_d	ANCESTRAL SPECIES	4	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818.z	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A.e	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00910000147699	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00410000028565	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190
Drill	MODERN SPECIES	66	FANCA (ENSMLEG00000040907)	ZNF276 (ENSMLEG00000034968)	VPS9D1 (ENSMLEG00000042157)	SPATA2L (ENSMLEG00000031058)	CDK10 (ENSMLEG00000032988)	CHMP1A (ENSMLEG00000038236)	DPEP1 (ENSMLEG00000038181)	CPNE7 (ENSMLEG00000012015)	ENSMLEG00000036728	SPG7 (ENSMLEG00000030922)	ANKRD11 (ENSMLEG00000028365)	ZNF778 (ENSMLEG00000037385)	SLC22A31 (ENSMLEG00000037865)	CDH15 (ENSMLEG00000042672)	ACSF3 (ENSMLEG00000043170)	CBFA2T3 (ENSMLEG00000029651) ##22	PABPN1L (ENSMLEG00000032667)	ENSMLEG00000034475	ENSMLEG00000038930	GALNS (ENSMLEG00000041599)	APRT (ENSMLEG00000043247)	CDT1 (ENSMLEG00000041793)	PIEZO1 (ENSMLEG00000028012)	CTU2 (ENSMLEG00000038526)	RNF166 (ENSMLEG00000042646)	SNAI3 (ENSMLEG00000033191)	MVD (ENSMLEG00000035354)	CYBA (ENSMLEG00000031361)	IL17C (ENSMLEG00000027565)	ZC3H18 (ENSMLEG00000042364)	ENSMLEG00000037010
Sooty mangabey	MODERN SPECIES	96	VPS9D1 (ENSCATG00000044326)	SPATA2L (ENSCATG00000044631)	CDK10 (ENSCATG00000030124)	SPATA33 (ENSCATG00000043190)	CHMP1A (ENSCATG00000043973)	ENSCATG00000042796	DPEP1 (ENSCATG00000037985)	CPNE7 (ENSCATG00000035644)	RPL13 (ENSCATG00000042426)	SPG7 (ENSCATG00000028647)	ANKRD11 (ENSCATG00000037760)	ZNF778 (ENSCATG00000034433)	SLC22A31 (ENSCATG00000041476)	CDH15 (ENSCATG00000029696)	ACSF3 (ENSCATG00000038511)	CBFA2T3 (ENSCATG00000031083) ##22	PABPN1L (ENSCATG00000031060)	ENSCATG00000033344	GALNS (ENSCATG00000033097)	APRT (ENSCATG00000033611)	CDT1 (ENSCATG00000044191)	PIEZO1 (ENSCATG00000032078)	ENSCATG00000044579	CTU2 (ENSCATG00000033042)	RNF166 (ENSCATG00000015970)	SNAI3 (ENSCATG00000031714)	ENSCATG00000031798	MVD (ENSCATG00000032028)	CYBA (ENSCATG00000034724)	IL17C (ENSCATG00000044689)	ZC3H18 (ENSCATG00000044561)
Vervet Monkey	MODERN SPECIES	24	FANCA (ENSCSAG00000002770)	ZNF276 (ENSCSAG00000002787)	VPS9D1 (ENSCSAG00000002796)	SPATA2L (ENSCSAG00000002798)	CDK10 (ENSCSAG00000002799)	SPATA33 (ENSCSAG00000002801)	CHMP1A (ENSCSAG00000002802)	DPEP1 (ENSCSAG00000002805)	CPNE7 (ENSCSAG00000002822)	SPG7 (ENSCSAG00000002843)	ANKRD11 (ENSCSAG00000002854)	ZNF778 (ENSCSAG00000002857)	SLC22A31 (ENSCSAG00000002860)	CDH15 (ENSCSAG00000002866)	ACSF3 (ENSCSAG00000002870)	CBFA2T3 (ENSCSAG00000002875) ##22	PABPN1L (ENSCSAG00000002881)	TRAPPC2L (ENSCSAG00000002885)	GALNS (ENSCSAG00000002889)	APRT (ENSCSAG00000002893)	CDT1 (ENSCSAG00000002900)	PIEZO1 (ENSCSAG00000002988)	CTU2 (ENSCSAG00000003023)	RNF166 (ENSCSAG00000003038)	SNAI3 (ENSCSAG00000003047)	MVD (ENSCSAG00000003054)	CYBA (ENSCSAG00000003057)	IL17C (ENSCSAG00000003062)	ZC3H18 (ENSCSAG00000003095)	ZFPM1 (ENSCSAG00000003107)	ZNF469 (ENSCSAG00000003112)
Rhinopithecus	ANCESTRAL SPECIES	22	ENSGT01030000234550.a.b	ENSGT00940000153269.b.a	ENSGT00950000182767.b.b.d.hb.a.a.a.b.b.b	ENSGT00940000163620	ENSGT00940000159236	ENSGT00510000048078	ENSGT00940000159376	ENSGT00940000161464	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A.e	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325.a	ENSGT00510000047505.c.b	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00410000028565	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a
Black snub-nosed monkey	MODERN SPECIES	172												ZNF778 (ENSRBIG00000033205)	SLC22A31 (ENSRBIG00000040554)	CDH15 (ENSRBIG00000029962)	ACSF3 (ENSRBIG00000043528)	CBFA2T3 (ENSRBIG00000032274) ##22	PABPN1L (ENSRBIG00000030740)	ENSRBIG00000041149	GALNS (ENSRBIG00000036807)	APRT (ENSRBIG00000035157)	CDT1 (ENSRBIG00000044946)	PIEZO1 (ENSRBIG00000044961)	ENSRBIG00000044966	CTU2 (ENSRBIG00000044987)	RNF166 (ENSRBIG00000035419)	SNAI3 (ENSRBIG00000025770)	MVD (ENSRBIG00000034837)	CYBA (ENSRBIG00000029680)	IL17C (ENSRBIG00000033837)	ZC3H18 (ENSRBIG00000000680)	ENSRBIG00000041824
Golden snub-nosed monkey	MODERN SPECIES	3015															ACSF3 (ENSRROG00000042699)	CBFA2T3 (ENSRROG00000043959) ##22	ENSRROG00000032240	ENSRROG00000043441	GALNS (ENSRROG00000031092)	APRT (ENSRROG00000031834)	CDT1 (ENSRROG00000037072)	PIEZO1 (ENSRROG00000033548)	ENSRROG00000042753	CTU2 (ENSRROG00000040333)	RNF166 (ENSRROG00000021426)	SNAI3 (ENSRROG00000032757)	MVD (ENSRROG00000034802)	CYBA (ENSRROG00000041592)	IL17C (ENSRROG00000037384)	ZC3H18 (ENSRROG00000029926)	ENSRROG00000045034
Platyrrhini	ANCESTRAL SPECIES	21	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966.m.a	ENSGT00940000162638.A	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.a	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Cebidae	ANCESTRAL SPECIES	21	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155856.u.a.b	ENSGT00940000155966.m.a	ENSGT00940000162638.A	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.a	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Cebidae_a	DUPLICATION
Cebidae_a	ANCESTRAL SPECIES	3																ENSGT00950000183176.b.e.m ##22	ENSGT00390000015484.g	ENSGT00530000063860.a	ENSGT00940000155437.ub	ENSGT00950000183227	ENSGT01060000248588.a.c.a	ENSGT00940000158371	ENSGT00390000007279.c.b.b.a.b.a	ENSGT00940000157891	ENSGT00940000154808.a.b	ENSGT00940000159795	ENSGT00940000161122	ENSGT00950000183033.a.b.b	ENSGT00940000157840	ENSGT00940000159595	ENSGT00530000064262
Capuchin	MODERN SPECIES	274																ENSCCAG00000019107 ##22	ENSCCAG00000028235	TGFBI (ENSCCAG00000038120)	SMAD5 (ENSCCAG00000021157)	SMIM32 (ENSCCAG00000017491)	ENSCCAG00000034622	TRPC7 (ENSCCAG00000034718)	SPOCK1 (ENSCCAG00000027360)	KLHL3 (ENSCCAG00000023606)	HNRNPA0 (ENSCCAG00000010302)	MYOT (ENSCCAG00000023359)	PKD2L2 (ENSCCAG00000036915)	FAM13B (ENSCCAG00000021558)	WNT8A (ENSCCAG00000036751)	ENSCCAG00000026729	NME5 (ENSCCAG00000034018)
Bolivian squirrel monkey	MODERN SPECIES	103	SPINK6 (ENSSBOG00000030299)	SPINK14 (ENSSBOG00000021006)	SPINK5 (ENSSBOG00000021923)	C5orf46 (ENSSBOG00000035041)	SCGB3A2 (ENSSBOG00000033234)	SPINK1 (ENSSBOG00000011269)	JAKMIP2 (ENSSBOG00000029971)	DPYSL3 (ENSSBOG00000026919)	STK32A (ENSSBOG00000021354)	PPP2R2B (ENSSBOG00000028953)	GPR151 (ENSSBOG00000018415)	TCERG1 (ENSSBOG00000023707)	POU4F3 (ENSSBOG00000030801)	RBM27 (ENSSBOG00000034172)	LARS1 (ENSSBOG00000026661)	ENSSBOG00000027145 ##22	ENSSBOG00000035124	TGFBI (ENSSBOG00000033447)	SMAD5 (ENSSBOG00000025913)	SMIM32 (ENSSBOG00000017136)	TRPC7 (ENSSBOG00000008290)	SPOCK1 (ENSSBOG00000020569)	ENSSBOG00000034420	KLHL3 (ENSSBOG00000020692)	ENSSBOG00000034299	ENSSBOG00000019777	ENSSBOG00000027108	MYOT (ENSSBOG00000020860)	PKD2L2 (ENSSBOG00000019985)	FAM13B (ENSSBOG00000027231)	WNT8A (ENSSBOG00000020138)
Cebidae_a	ANCESTRAL SPECIES	51	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155856.u.a.b	ENSGT00940000155966.m.a	ENSGT00940000162638.A	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e.n ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Capuchin	MODERN SPECIES	508	VPS9D1 (ENSCCAG00000035171)	SPATA2L (ENSCCAG00000032657)	CDK10 (ENSCCAG00000028810)	SPATA33 (ENSCCAG00000022579)	CHMP1A (ENSCCAG00000035528)	DPEP1 (ENSCCAG00000030093)	CPNE7 (ENSCCAG00000020943)	RPL13 (ENSCCAG00000024248)	SPG7 (ENSCCAG00000023609)	ENSCCAG00000035392	ANKRD11 (ENSCCAG00000013589)	ZNF778 (ENSCCAG00000036765)	SLC22A31 (ENSCCAG00000032645)	CDH15 (ENSCCAG00000033494)	ENSCCAG00000028000	ENSCCAG00000035478 ##22	PABPN1L (ENSCCAG00000027631)	TRAPPC2L (ENSCCAG00000027684)	GALNS (ENSCCAG00000035940)	APRT (ENSCCAG00000032131)	CDT1 (ENSCCAG00000023387)	PIEZO1 (ENSCCAG00000035159)	CTU2 (ENSCCAG00000030905)	RNF166 (ENSCCAG00000037660)	SNAI3 (ENSCCAG00000037651)
Bolivian squirrel monkey	MODERN SPECIES	48																ENSSBOG00000018570 ##22	PABPN1L (ENSSBOG00000018410)	TRAPPC2L (ENSSBOG00000027294)	GALNS (ENSSBOG00000028431)	APRT (ENSSBOG00000019978)	CDT1 (ENSSBOG00000035956)	PIEZO1 (ENSSBOG00000036054)	CTU2 (ENSSBOG00000022690)	ENSSBOG00000020774	SNAI3 (ENSSBOG00000026371)	MVD (ENSSBOG00000024849)	CYBA (ENSSBOG00000032747)	IL17C (ENSSBOG00000018593)	ZC3H18 (ENSSBOG00000023949)	ENSSBOG00000023100	ZNF469 (ENSSBOG00000022836)
Marmoset	MODERN SPECIES	12	VPS9D1 (ENSCJAG00000010650)	SPATA2L (ENSCJAG00000010745)	CDK10 (ENSCJAG00000010752)	SPATA33 (ENSCJAG00000069778)	CHMP1A (ENSCJAG00000087370)	DPEP1 (ENSCJAG00000010841)	ENSCJAG00000083607	CPNE7 (ENSCJAG00000010770)	ENSCJAG00000009672	SPG7 (ENSCJAG00000040990)	ENSCJAG00000074549	ZNF778 (ENSCJAG00000010892)	ANKRD11 (ENSCJAG00000010864)	SLC22A31 (ENSCJAG00000036892)	CDH15 (ENSCJAG00000010899)	CBFA2T3 (ENSCJAG00000052863) ##22	ENSCJAG00000045284	TRAPPC2L (ENSCJAG00000013011)	GALNS (ENSCJAG00000012993)	APRT (ENSCJAG00000012990)	CDT1 (ENSCJAG00000012986)	PIEZO1 (ENSCJAG00000012943)	CTU2 (ENSCJAG00000043426)	RNF166 (ENSCJAG00000012927)	SNAI3 (ENSCJAG00000012922)	MVD (ENSCJAG00000012897)	CYBA (ENSCJAG00000051807)	IL17C (ENSCJAG00000078077)	ZC3H18 (ENSCJAG00000012844)	ZFPM1 (ENSCJAG00000012840)	BANP (ENSCJAG00000074926)
Mas night monkey	MODERN SPECIES	517	CDK10 (ENSANAG00000029374)	ENSANAG00000030192	CHMP1A (ENSANAG00000035560)	DPEP1 (ENSANAG00000018942)	CPNE7 (ENSANAG00000033866)	RPL13 (ENSANAG00000030539)	SPG7 (ENSANAG00000021529)	ENSANAG00000026879	ANKRD11 (ENSANAG00000027875)	ENSANAG00000022123	ZNF778 (ENSANAG00000022193)	ENSANAG00000019443	SLC22A31 (ENSANAG00000031267)	CDH15 (ENSANAG00000035848)	ACSF3 (ENSANAG00000034101)	CBFA2T3 (ENSANAG00000034801) ##22	PABPN1L (ENSANAG00000038178)	ENSANAG00000028335	GALNS (ENSANAG00000028592)	ENSANAG00000037195	ENSANAG00000028746	PIEZO1 (ENSANAG00000030637)	CTU2 (ENSANAG00000037259)	RNF166 (ENSANAG00000037503)	SNAI3 (ENSANAG00000032748)	MVD (ENSANAG00000035160)	CYBA (ENSANAG00000037939)	IL17C (ENSANAG00000031107)	ZC3H18 (ENSANAG00000021325)	ENSANAG00000001376	ZNF469 (ENSANAG00000035596)
Tarsier	MODERN SPECIES	7336																CBFA2T3 (ENSTSYG00000032240) ##22	TRAPPC2L (ENSTSYG00000012868)	GALNS (ENSTSYG00000034707)	APRT (ENSTSYG00000031872)	CDT1 (ENSTSYG00000036284)	PIEZO1 (ENSTSYG00000027348)	CTU2 (ENSTSYG00000013726)	RNF166 (ENSTSYG00000031472)	SNAI3 (ENSTSYG00000025594)	MVD (ENSTSYG00000031262)	CYBA (ENSTSYG00000036710)	IL17C (ENSTSYG00000034277)	ZC3H18 (ENSTSYG00000036966)
Strepsirrhini	ANCESTRAL SPECIES	17	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.a	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Bushbaby	MODERN SPECIES	300	ZNF276 (ENSOGAG00000004891)	VPS9D1 (ENSOGAG00000004889)	SPATA2L (ENSOGAG00000028038)	CDK10 (ENSOGAG00000004886)	SPATA33 (ENSOGAG00000004885)	ENSOGAG00000004883	DPEP1 (ENSOGAG00000004881)	CPNE7 (ENSOGAG00000001075)	RPL13 (ENSOGAG00000026444)	SPG7 (ENSOGAG00000015790)	ENSOGAG00000033895	ANKRD11 (ENSOGAG00000027523)	ZNF778 (ENSOGAG00000027711)	CDH15 (ENSOGAG00000031483)	ACSF3 (ENSOGAG00000001315)	CBFA2T3 (ENSOGAG00000009704) ##22	PABPN1L (ENSOGAG00000000433)	TRAPPC2L (ENSOGAG00000000431)	GALNS (ENSOGAG00000000429)	APRT (ENSOGAG00000033873)	CDT1 (ENSOGAG00000024919)	PIEZO1 (ENSOGAG00000025510)	CTU2 (ENSOGAG00000000420)	RNF166 (ENSOGAG00000030194)	SNAI3 (ENSOGAG00000000419)	MVD (ENSOGAG00000000418)	CYBA (ENSOGAG00000000417)	IL17C (ENSOGAG00000000416)	ZC3H18 (ENSOGAG00000000414)	ZFPM1 (ENSOGAG00000028472)	ENSOGAG00000034609
Lemuriformes	ANCESTRAL SPECIES	51	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.a	ENSGT00510000047505.c.b	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a
Mouse lemur	MODERN SPECIES	12	ZFPM1 (ENSMICG00000032078)	ZC3H18 (ENSMICG00000006699)	IL17C (ENSMICG00000006713)	CYBA (ENSMICG00000043128)	MVD (ENSMICG00000006723)	SNAI3 (ENSMICG00000048066)	RNF166 (ENSMICG00000034727)	ENSMICG00000046938	ENSMICG00000036370	PIEZO1 (ENSMICG00000008905)	CDT1 (ENSMICG00000046243)	APRT (ENSMICG00000042171)	GALNS (ENSMICG00000006599)	ENSMICG00000047407	ENSMICG00000033395	CBFA2T3 (ENSMICG00000000410) ##22	PABPN1L (ENSMICG00000028179)	TRAPPC2L (ENSMICG00000001303)	ENSMICG00000047285	ENSMICG00000044726	ENSMICG00000041938	ENSMICG00000037817	ENSMICG00000047281	ENSMICG00000046257	CDH15 (ENSMICG00000015535)	ENSMICG00000034561	ENSMICG00000045393	ENSMICG00000043151	ENSMICG00000043829	ANKRD11 (ENSMICG00000032745)	SPG7 (ENSMICG00000008180)
Lemuriformes_a	ANCESTRAL SPECIES	55	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162638.A	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505.c.b	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Greater bamboo lemur	MODERN SPECIES	175	ZNF276 (ENSPSMG00000010649)	ENSPSMG00000010629	VPS9D1 (ENSPSMG00000010618)	ENSPSMG00000010606	CDK10 (ENSPSMG00000010584)	SPATA33 (ENSPSMG00000010508)	CHMP1A (ENSPSMG00000010501)	DPEP1 (ENSPSMG00000010475)	CPNE7 (ENSPSMG00000010425)	RPL13 (ENSPSMG00000010359)	SPG7 (ENSPSMG00000010197)	ANKRD11 (ENSPSMG00000010017)	ZNF778 (ENSPSMG00000009944)	CDH15 (ENSPSMG00000009911)	ACSF3 (ENSPSMG00000009839)	CBFA2T3 (ENSPSMG00000009813) ##22	PABPN1L (ENSPSMG00000009791)	ENSPSMG00000009771	GALNS (ENSPSMG00000009716)	APRT (ENSPSMG00000009665)	CDT1 (ENSPSMG00000009647)	ENSPSMG00000009632	ENSPSMG00000009627	CTU2 (ENSPSMG00000009614)	RNF166 (ENSPSMG00000009591)	SNAI3 (ENSPSMG00000009571)	MVD (ENSPSMG00000009568)	ENSPSMG00000009551	IL17C (ENSPSMG00000009542)	ZC3H18 (ENSPSMG00000009510)	ENSPSMG00000009376
Coquerels sifaka	DUPLICATION
Coquerels sifaka	MODERN SPECIES	714																CBFA2T3 (ENSPCOG00000028480) ##22	PABPN1L (ENSPCOG00000024077)	TRAPPC2L (ENSPCOG00000017490)	GALNS (ENSPCOG00000017227)	APRT (ENSPCOG00000011766)	CDT1 (ENSPCOG00000019409)	PIEZO1 (ENSPCOG00000019773)	CTU2 (ENSPCOG00000006406)	ENSPCOG00000019734	SNAI3 (ENSPCOG00000020552)	MVD (ENSPCOG00000016803)	CYBA (ENSPCOG00000024265)	IL17C (ENSPCOG00000027206)	ZC3H18 (ENSPCOG00000025239)	ZFPM1 (ENSPCOG00000016313)	ZNF469 (ENSPCOG00000021371)
Coquerels sifaka	MODERN SPECIES	691	FANCA (ENSPCOG00000020166)	ZNF276 (ENSPCOG00000028322)	VPS9D1 (ENSPCOG00000024232)	SPATA2L (ENSPCOG00000018121)	CDK10 (ENSPCOG00000016730)	SPATA33 (ENSPCOG00000027277)	CHMP1A (ENSPCOG00000013211)	DPEP1 (ENSPCOG00000022455)	CPNE7 (ENSPCOG00000015881)	RPL13 (ENSPCOG00000024647)	SPG7 (ENSPCOG00000015112)	ANKRD11 (ENSPCOG00000028050)	ZNF778 (ENSPCOG00000014874)	CDH15 (ENSPCOG00000025425)	ACSF3 (ENSPCOG00000016026)	ENSPCOG00000004893 ##22
Atlantogenata	ANCESTRAL SPECIES	52	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Xenarthra	ANCESTRAL SPECIES	1038																ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000012337
Armadillo	MODERN SPECIES	4025																CBFA2T3 (ENSDNOG00000032619) ##22	PABPN1L (ENSDNOG00000034677)	TRAPPC2L (ENSDNOG00000040235)	ENSDNOG00000039091	CDT1 (ENSDNOG00000037205)
Afrotheria	ANCESTRAL SPECIES	50	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00940000171275	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966.d	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Afrotheria_a	ANCESTRAL SPECIES	108	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00940000171275	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00390000007818	ENSGT00940000156329	ENSGT00940000155966.d	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00390000015359	ENSGT00390000002290	ENSGT00940000161887	ENSGT00730000111190	ENSGT00530000063823.b.a	ENSGT00530000065415
Elephant	MODERN SPECIES	458	FANCA (ENSLAFG00000014970)	ZNF276 (ENSLAFG00000018198)	VPS9D1 (ENSLAFG00000018190)	SPATA2L (ENSLAFG00000018186)	CDK10 (ENSLAFG00000018179)	ENSLAFG00000014988	CHMP1A (ENSLAFG00000029767)	DPEP1 (ENSLAFG00000022017)	CPNE7 (ENSLAFG00000016621)	RPL13 (ENSLAFG00000004054)	SPG7 (ENSLAFG00000004051)	ANKRD11 (ENSLAFG00000027068)	SLC22A31 (ENSLAFG00000026059)	CDH15 (ENSLAFG00000005917)	ACSF3 (ENSLAFG00000013585)	CBFA2T3 (ENSLAFG00000018668) ##22	ENSLAFG00000025902	TRAPPC2L (ENSLAFG00000018665)	GALNS (ENSLAFG00000018664)	APRT (ENSLAFG00000004108)	CDT1 (ENSLAFG00000004104)	PIEZO1 (ENSLAFG00000005128)	CTU2 (ENSLAFG00000005123)	RNF166 (ENSLAFG00000005119)	SNAI3 (ENSLAFG00000005117)	MVD (ENSLAFG00000007196)	CYBA (ENSLAFG00000005109)	ZC3H18 (ENSLAFG00000015674)	ZFPM1 (ENSLAFG00000013561)	ENSLAFG00000030575	BANP (ENSLAFG00000005122)
Hyrax	MODERN SPECIES	5105																CBFA2T3 (ENSPCAG00000002849) ##22	ENSPCAG00000002797	TRAPPC2L (ENSPCAG00000002785)	GALNS (ENSPCAG00000002742)	APRT (ENSPCAG00000002719)	CDT1 (ENSPCAG00000002664)
Tenrec	DUPLICATION
Tenrec	DUPLICATION
Tenrec	MODERN SPECIES	8870																ENSETEG00000018434 ##22	ENSETEG00000018428 ##22
Tenrec	MODERN SPECIES	8870															ENSETEG00000018434 ##22	ENSETEG00000018428 ##22
Tenrec	MODERN SPECIES	8869																ENSETEG00000005559 ##22
Actinopterygii	ANCESTRAL SPECIES	13	ENSGT00940000159841	ENSGT00970000193520	ENSGT00950000182838.B.a.a	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000159903	ENSGT00500000044924	ENSGT00390000007453	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00940000157175	ENSGT00940000154848.b	ENSGT00390000017697.b	ENSGT00940000159836	ENSGT00940000165234	ENSGT00940000160687
Reedfish	MODERN SPECIES	17	ap1g1 (ENSECRG00000012404)	ENSECRG00000012373	ATXN1L (ENSECRG00000012354)	dpep1 (ENSECRG00000012295)	sult5a1 (ENSECRG00000012232)	dhodh (ENSECRG00000012205)	ist1 (ENSECRG00000012169)	SPG7 (ENSECRG00000012127)	ENSECRG00000012107	ANKRD11 (ENSECRG00000012092)	SLC22A31 (ENSECRG00000012073)	cdh15 (ENSECRG00000012049)	ACSF3 (ENSECRG00000012022)	ENSECRG00000012003	ENSECRG00000011994	CBFA2T3 (ENSECRG00000011929) ##22	pabpn1l (ENSECRG00000011882)	ENSECRG00000011867	trappc2l (ENSECRG00000011858)	galns (ENSECRG00000011836)	CDT1 (ENSECRG00000011815)	aprt (ENSECRG00000011787)	ENSECRG00000011774	ENSECRG00000011758	ENSECRG00000011743	ENSECRG00000011729	PIEZO1 (ENSECRG00000011668)	ctu2 (ENSECRG00000011586)	RNF166 (ENSECRG00000011541)	ENSECRG00000011522	ENSECRG00000011334
Neopterygii	ANCESTRAL SPECIES	22	ENSGT00950000182838.B.a.a	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000159903	ENSGT00940000161671	ENSGT00500000044924	ENSGT00940000168098	ENSGT00390000007453	ENSGT00940000156329	ENSGT00940000155966	ENSGT00940000162670	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00940000154848.b	ENSGT00390000017697.b	ENSGT00940000159836	ENSGT00940000165234	ENSGT00940000160687	ENSGT00940000159757
Spotted gar	MODERN SPECIES	662	PHLPP2 (ENSLOCG00000004332)	ap1g1 (ENSLOCG00000004347)	ZNF821 (ENSLOCG00000004371)	ATXN1L (ENSLOCG00000004385)	sult5a1 (ENSLOCG00000004402)	HPR (ENSLOCG00000004416)	ENSLOCG00000004447	dhodh (ENSLOCG00000004457)	ENSLOCG00000004480	ist1 (ENSLOCG00000004525)	SPG7 (ENSLOCG00000004540)	ANKRD11 (ENSLOCG00000004570)	SLC22A31 (ENSLOCG00000004592)	cdh15 (ENSLOCG00000004612)	ACSF3 (ENSLOCG00000004650)	CBFA2T3 (ENSLOCG00000004667) ##22	pabpn1l (ENSLOCG00000004694)	trappc2l (ENSLOCG00000004728)	galns (ENSLOCG00000004743)	aprt (ENSLOCG00000004763)	CDT1 (ENSLOCG00000004785)	PIEZO1 (ENSLOCG00000004799)	ctu2 (ENSLOCG00000004836)	RNF166 (ENSLOCG00000004854)	SNAI3 (ENSLOCG00000004887)	ENSLOCG00000004902	ENSLOCG00000004924	ciao2b (ENSLOCG00000004939)	rrad (ENSLOCG00000004955)	ENSLOCG00000004983	pdp2 (ENSLOCG00000017591)
Osteoglossocephalai	ANCESTRAL SPECIES					ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000159903	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00940000154848.b	ENSGT00390000017697.b	ENSGT00940000159836	ENSGT00940000165234	ENSGT00940000160687	ENSGT00940000159757
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	84	ENSGT00950000183102.A.b.b	ENSGT00940000159841	ENSGT00950000182838.B.a.a.c	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00390000007453.i	ENSGT00390000013574	ENSGT00940000162823.C.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e.s ##22	ENSGT00940000154606.r	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00940000154848.b	ENSGT00390000017697.b	ENSGT00940000159836.f	ENSGT00390000008295.a.q	ENSGT00940000159573.d	ENSGT00940000165226.b
P. kingsleyae	MODERN SPECIES	43	ap1g1 (ENSPKIG00000009139)	ZNF821 (ENSPKIG00000009084)	ATXN1L (ENSPKIG00000009066)	ist1 (ENSPKIG00000009049)	ENSPKIG00000009030	ENSPKIG00000009010	ENSPKIG00000009000	sult5a1 (ENSPKIG00000008973)	dpep1 (ENSPKIG00000008937)	SLC22A31 (ENSPKIG00000008907)	ENSPKIG00000008883	ANKRD11 (ENSPKIG00000008776)	SPG7 (ENSPKIG00000008639)	cdh15 (ENSPKIG00000008586)	ACSF3 (ENSPKIG00000008534)	CBFA2T3 (ENSPKIG00000008424) ##22	trappc2l (ENSPKIG00000008361)	pabpn1l (ENSPKIG00000008340)	galns (ENSPKIG00000008276)	aprt (ENSPKIG00000008216)	CDT1 (ENSPKIG00000008196)	PIEZO1 (ENSPKIG00000007997)	ctu2 (ENSPKIG00000007920)	RNF166 (ENSPKIG00000007890)	SNAI3 (ENSPKIG00000007872)	cdh1 (ENSPKIG00000007678)	ciao2b (ENSPKIG00000007575)	rrad (ENSPKIG00000007552)	pdp2 (ENSPKIG00000007531)	ca7 (ENSPKIG00000007497)	nae1 (ENSPKIG00000007379)
Asian bonytongue	MODERN SPECIES	2	USP10 (ENSSFOG00015015209)	marveld3 (ENSSFOG00015026837)	PHLPP2 (ENSSFOG00015015313)	ap1g1 (ENSSFOG00015015385)	ZNF821 (ENSSFOG00015015463)	ATXN1L (ENSSFOG00015015480)	ist1 (ENSSFOG00015027420)	ENSSFOG00015029714	sult5a1 (ENSSFOG00015015533)	dpep1 (ENSSFOG00015015547)	SLC22A31 (ENSSFOG00015026577)	ANKRD11 (ENSSFOG00015015598)	SPG7 (ENSSFOG00015026066)	cdh15 (ENSSFOG00015015646)	ACSF3 (ENSSFOG00015015713)	CBFA2T3 (ENSSFOG00015015761) ##22	pabpn1l (ENSSFOG00015025999)	trappc2l (ENSSFOG00015029365)	galns (ENSSFOG00015015865)	aprt (ENSSFOG00015033142)	CDT1 (ENSSFOG00015026416)	PIEZO1 (ENSSFOG00015015938)	ctu2 (ENSSFOG00015016029)	RNF166 (ENSSFOG00015027693)	SNAI3 (ENSSFOG00015016115)	ENSSFOG00015016129	ENSSFOG00015016189	ENSSFOG00015016272	rrad (ENSSFOG00015016448)	pdp2 (ENSSFOG00015016484)	ca7 (ENSSFOG00015016490)
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00950000183176.b.e.t ##22
P. kingsleyae	MODERN SPECIES	328										ENSPKIG00000024087	USP10 (ENSPKIG00000024052)	ap1g1 (ENSPKIG00000023973)	ist1 (ENSPKIG00000023933)	dhodh (ENSPKIG00000023908)	ANKRD11 (ENSPKIG00000023875)	CBFA2T3 (ENSPKIG00000023828) ##22	RNF166 (ENSPKIG00000023795)	RRAD (ENSPKIG00000023780)	ENSPKIG00000023776	dync1li2 (ENSPKIG00000023759)	cmtm4 (ENSPKIG00000023743)	ENSPKIG00000023737
Asian bonytongue	MODERN SPECIES	22	bco1 (ENSSFOG00015019750)	psmd7 (ENSSFOG00015019662)	ENSSFOG00015019642	ENSSFOG00015019625	rpl13 (ENSSFOG00015028948)	CPNE7 (ENSSFOG00015019566)	cyb5b (ENSSFOG00015019555)	ENSSFOG00015019543	zfhx3b (ENSSFOG00015019511)	ENSSFOG00015019480	USP10 (ENSSFOG00015019425)	ap1g1 (ENSSFOG00015019363)	ist1 (ENSSFOG00015019323)	dhodh (ENSSFOG00015019290)	ANKRD11 (ENSSFOG00015019249)	CBFA2T3 (ENSSFOG00015019183) ##22	RNF166 (ENSSFOG00015025324)	ciao2b (ENSSFOG00015033006)	RRAD (ENSSFOG00015031796)	ENSSFOG00015019078	dync1li2 (ENSSFOG00015019066)	cmtm4 (ENSSFOG00015019047)	ENSSFOG00015019036	cdh11 (ENSSFOG00015019008)	CDH8 (ENSSFOG00015030944)	CDH8 (ENSSFOG00015018965)	NETO2 (ENSSFOG00015018930)	ENSSFOG00015018919	DNAJA2 (ENSSFOG00015018862)	zgc:92818 (ENSSFOG00015031432)	vps35 (ENSSFOG00015018733)
Clupeocephala	ANCESTRAL SPECIES	68				ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000159903	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00940000154848.b	ENSGT00390000017697.b	ENSGT00940000159836	ENSGT00940000165234	ENSGT00940000159757	ENSGT00550000074901
Otomorpha	ANCESTRAL SPECIES	78			ENSGT00390000007453	ENSGT00500000044924	ENSGT00940000159903	ENSGT00940000161671	ENSGT00940000160876.b	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00390000017697.b	ENSGT00940000154511.a	ENSGT00940000154848.b	ENSGT00940000159836	ENSGT00940000165234	ENSGT00940000159757	ENSGT00550000074901
Clupeiformes	ANCESTRAL SPECIES	91	ENSGT00390000004417.b	ENSGT00940000155010.a.a	ENSGT00940000156563.a	ENSGT00940000163421.a.d	ENSGT00940000156938.e	ENSGT00390000007453	ENSGT00500000044924	ENSGT00940000162823.C.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00690000103052	ENSGT00940000154848.b	ENSGT00940000156519.o	ENSGT00950000182971.A	ENSGT00390000015893	ENSGT00390000015857
Atlantic herring	MODERN SPECIES	22	MATCAP1 (ENSCHAG00000019336)	GABARAPL2 (ENSCHAG00000019341)	NQO2 (ENSCHAG00000019397)	ENSCHAG00000019676	ENSCHAG00000019751	ist1 (ENSCHAG00000019762)	dhodh (ENSCHAG00000019823)	ENSCHAG00000019988	sult5a1 (ENSCHAG00000019992)	dpep1 (ENSCHAG00000020006)	SLC22A31 (ENSCHAG00000020045)	ANKRD11 (ENSCHAG00000020059)	SPG7 (ENSCHAG00000020225)	cdh15 (ENSCHAG00000021955)	ACSF3 (ENSCHAG00000022016)	CBFA2T3 (ENSCHAG00000022304) ##22	trappc2l (ENSCHAG00000022318)	galns (ENSCHAG00000022371)	aprt (ENSCHAG00000022607)	CDT1 (ENSCHAG00000022614)	PIEZO1 (ENSCHAG00000022740)	ctu2 (ENSCHAG00000023544)	RNF166 (ENSCHAG00000023602)	SNAI3 (ENSCHAG00000023607)	ENSCHAG00000023677	ENSCHAG00000025187	ENSCHAG00000025201	zdhhc7 (ENSCHAG00000025305)	nip7 (ENSCHAG00000025309)	cog8 (ENSCHAG00000025312)	NOB1 (ENSCHAG00000025319)
Denticle herring	MODERN SPECIES	7	ENSDCDG00000031868	nadsyn1 (ENSDCDG00000031887)	tpcn2 (ENSDCDG00000031902)	ENSDCDG00000022293	ccnd1 (ENSDCDG00000022299)	ENSDCDG00000022301	lto1 (ENSDCDG00000022303)	fgf19 (ENSDCDG00000022305)	fgf4 (ENSDCDG00000022308)	fgf3 (ENSDCDG00000022315)	zgc:153993 (ENSDCDG00000022398)	ano1a (ENSDCDG00000022511)	FADD (ENSDCDG00000026252)	pacsin3 (ENSDCDG00000026254)	ACSF3 (ENSDCDG00000026303)	CBFA2T3 (ENSDCDG00000026480) ##22	PABPN1L (ENSDCDG00000026482)	trappc2l (ENSDCDG00000026484)	galns (ENSDCDG00000026497)	tnni2b.2 (ENSDCDG00000026548)	tnni2b.1 (ENSDCDG00000026551)	ENSDCDG00000026552	ENSDCDG00000026554	ENSDCDG00000026556	tnnt3b (ENSDCDG00000026571)	myod1 (ENSDCDG00000026580)	OTOG (ENSDCDG00000026583)	ABCC8 (ENSDCDG00000026610)	ENSDCDG00000026869	chrna5 (ENSDCDG00000026872)	ENSDCDG00000026877
Otophysi	ANCESTRAL SPECIES	155											ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00390000017697.b	ENSGT00940000154511.a	ENSGT00940000154848.b	ENSGT00940000159836	ENSGT00940000165234	ENSGT00940000159757	ENSGT00550000074901
Characiphysae	ANCESTRAL SPECIES	6	ENSGT00940000165300.b.a.a.a	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000154848.b	ENSGT00940000154511.a	ENSGT00390000017697.b	ENSGT00940000156038.a.a	ENSGT00940000157042.c.b	ENSGT00940000155710.b	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b
Channel catfish	MODERN SPECIES	19	apba2 (ENSIPUG00000023407)	sord (ENSIPUG00000023442)	ENSIPUG00000023466	ca7 (ENSIPUG00000023469)	ENSIPUG00000023479	RRAD (ENSIPUG00000023484)	FAM96B (ENSIPUG00000023490)	ENSIPUG00000023500	LOXL4 (ENSIPUG00000023503)	ATL2 (ENSIPUG00000023517)	SLC22A31 (ENSIPUG00000023532)	ankrd11 (ENSIPUG00000023534)	spg7 (ENSIPUG00000023549)	cdh15 (ENSIPUG00000023565)	acsf3 (ENSIPUG00000023570)	cbfa2t3 (ENSIPUG00000023579) ##22	PABPN1L (ENSIPUG00000023583)	trappc2l (ENSIPUG00000023588)	galns (ENSIPUG00000023592)	aprt (ENSIPUG00000023594)	cdt1 (ENSIPUG00000023602)	piezo1 (ENSIPUG00000023612)	ctu2 (ENSIPUG00000023630)	RNF166 (ENSIPUG00000023645)	snai3 (ENSIPUG00000023647)	ENSIPUG00000023648	rhpn2 (ENSIPUG00000023685)	cep89 (ENSIPUG00000023686)	zgc:165481 (ENSIPUG00000023692)	slc7a9 (ENSIPUG00000023696)	nudt19 (ENSIPUG00000023705)
Characiphysae_b	ANCESTRAL SPECIES	5	ENSGT00940000163916	ENSGT00940000165300.a	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000154848.b	ENSGT00390000017697.b	ENSGT00940000156038.a.a	ENSGT00940000157042.c.b	ENSGT00940000155710.b	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a
Electric eel	MODERN SPECIES	108	mphosph10 (ENSEEEG00000018436)	mcee (ENSEEEG00000018489)	APBA2 (ENSEEEG00000018492)	sord (ENSEEEG00000018497)	ca7 (ENSEEEG00000018563)	rrad (ENSEEEG00000018685)	ciao2b (ENSEEEG00000018689)	ENSEEEG00000018701	LOXL4 (ENSEEEG00000018713)	ATL2 (ENSEEEG00000018850)	SLC22A31 (ENSEEEG00000019391)	ANKRD11 (ENSEEEG00000019392)	SPG7 (ENSEEEG00000019401)	cdh15 (ENSEEEG00000019546)	ACSF3 (ENSEEEG00000019554)	CBFA2T3 (ENSEEEG00000019560) ##22	pabpn1l (ENSEEEG00000019570)	trappc2l (ENSEEEG00000019573)	galns (ENSEEEG00000019581)	aprt (ENSEEEG00000019582)	CDT1 (ENSEEEG00000019584)	PIEZO1 (ENSEEEG00000019596)	ctu2 (ENSEEEG00000019678)	RNF166 (ENSEEEG00000019690)	SNAI3 (ENSEEEG00000019692)	cdh1 (ENSEEEG00000019697)
Characoidei	ANCESTRAL SPECIES	4	ENSGT00940000163916	ENSGT00940000165300.a	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000154848.b	ENSGT00390000017697.b	ENSGT00940000156038.a.a	ENSGT00940000157042.c.b	ENSGT00940000155710.b	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a
Red-bellied piranha	MODERN SPECIES	463															ENSPNAG00000021724	CBFA2T3 (ENSPNAG00000021712) ##22	pabpn1l (ENSPNAG00000021666)	trappc2l (ENSPNAG00000021645)	galns (ENSPNAG00000006303)	aprt (ENSPNAG00000021570)	CDT1 (ENSPNAG00000021535)	aprt (ENSPNAG00000021514)	PIEZO1 (ENSPNAG00000021501)	ctu2 (ENSPNAG00000021339)	RNF166 (ENSPNAG00000021320)	ENSPNAG00000021309
Mexicana tetra	MODERN SPECIES	46	sord (ENSAMXG00000043919)	sord (ENSAMXG00000005287)	ca7 (ENSAMXG00000005270)	ENSAMXG00000037925	ENSAMXG00000039437	rrad (ENSAMXG00000037769)	ciao2b (ENSAMXG00000038216)	ENSAMXG00000036183	LOXL4 (ENSAMXG00000005173)	ATL2 (ENSAMXG00000005138)	SLC22A31 (ENSAMXG00000002678)	ANKRD11 (ENSAMXG00000010764)	SPG7 (ENSAMXG00000010787)	cdh15 (ENSAMXG00000010808)	ACSF3 (ENSAMXG00000010847)	CBFA2T3 (ENSAMXG00000010859) ##22	PABPN1L (ENSAMXG00000010873)	trappc2l (ENSAMXG00000035684)	galns (ENSAMXG00000010887)	aprt (ENSAMXG00000010907)	CDT1 (ENSAMXG00000010915)	PIEZO1 (ENSAMXG00000010945)	ctu2 (ENSAMXG00000010985)	RNF166 (ENSAMXG00000011003)	ENSAMXG00000011013	ENSAMXG00000018475	CDH3 (ENSAMXG00000018521)	ENSAMXG00000033534	ENSAMXG00000031649	ENSAMXG00000044059
Cyprinoidei	ANCESTRAL SPECIES	130	ENSGT00390000004417.b	ENSGT00940000159150	ENSGT00940000163421.a.d	ENSGT00940000156938.e	ENSGT00940000159615	ENSGT00940000163403	ENSGT01020000230389.a.b	ENSGT00940000159903	ENSGT00500000044924.c	ENSGT00390000007453	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154848.b.j	ENSGT00940000169946
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	708										ENSGT00390000007453.g.a.b	ENSGT00940000162670.l	ENSGT00940000155966.cb	ENSGT00940000156329.f	ENSGT00940000160118.e	ENSGT00940000157000.o	ENSGT00950000183176.b.e.u ##22	ENSGT00940000161325.n	ENSGT00940000157787.b	ENSGT00390000017259.s.b	ENSGT00390000012337.l	ENSGT00940000157348.r
Goldfish	MODERN SPECIES	25	ENSCARG00000067943	ENSCARG00000067948	ENSCARG00000067957	ENSCARG00000067964	ENSCARG00000067967	ENSCARG00000067974	ENSCARG00000067980	ENSCARG00000067987	ENSCARG00000067991	ENSCARG00000067992	ENSCARG00000067998	DCTN6 (ENSCARG00000068011)	ENSCARG00000068028	cldnd1a (ENSCARG00000068030)	ENSCARG00000068038	CBFA2T3 (ENSCARG00000068044) ##22	galns (ENSCARG00000068054)	CDT1 (ENSCARG00000068072)	aprt (ENSCARG00000068085)	PIEZO1 (ENSCARG00000068112)	RNF166 (ENSCARG00000068444)	ENSCARG00000068469	pde5ab (ENSCARG00000068694)	ENSCARG00000068853	mad2l1 (ENSCARG00000005849)	camk2d1 (ENSCARG00000005922)	spink4 (ENSCARG00000006313)	mttp (ENSCARG00000006403)	ENSCARG00000008192	xpa (ENSCARG00000008200)	pla2g12a (ENSCARG00000008282)
Cyprininae_a	ANCESTRAL SPECIES	110	ENSGT00940000160974.b.d.p	ENSGT00940000159464.a	ENSGT00940000158707.a.a.u	ENSGT00940000160309.e.b.f	ENSGT00390000004215.a.b.b.c.a.b.a.c.g	ENSGT00390000004417.b.a	ENSGT00940000163421.a.d.g	ENSGT00940000159615.c	ENSGT00390000013574.d	ENSGT00390000007453.g.a.b	ENSGT00940000162670.l	ENSGT00940000155966.cb	ENSGT00940000156329.f	ENSGT00940000160118.e	ENSGT00940000157000.o	ENSGT00950000183176.b.e.u ##22	ENSGT00940000161325.n	ENSGT00510000047505.h	ENSGT00940000157787.b	ENSGT00390000017259.s.b	ENSGT00390000012337.l	ENSGT00940000157348.r	ENSGT00390000008797.b	ENSGT00950000182909.b.b.b.i	ENSGT00940000154848.b.j.a
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	281	ENSSGRG00000008599	ENSSGRG00000008595	ZNF319 (ENSSGRG00000008589)	csnk2a2a (ENSSGRG00000008531)	MATCAP1 (ENSSGRG00000008530)	nqo1 (ENSSGRG00000008520)	zgc:194679 (ENSSGRG00000008519)	dpep1 (ENSSGRG00000008518)	ENSSGRG00000008517	ist1 (ENSSGRG00000008484)	SLC22A31 (ENSSGRG00000008476)	ANKRD11 (ENSSGRG00000008278)	SPG7 (ENSSGRG00000007461)	cdh15 (ENSSGRG00000007444)	ACSF3 (ENSSGRG00000007442)	CBFA2T3 (ENSSGRG00000007439) ##22	ENSSGRG00000007437 ##22	trappc2l (ENSSGRG00000007434)	galns (ENSSGRG00000007427)	aprt (ENSSGRG00000007422)	aprt (ENSSGRG00000007418)	CDT1 (ENSSGRG00000007417)	PIEZO1 (ENSSGRG00000007389)	ctu2 (ENSSGRG00000007375)	RNF166 (ENSSGRG00000007369)	ENSSGRG00000007161
Golden-line barbel	MODERN SPECIES	281	ENSSGRG00000008595	ZNF319 (ENSSGRG00000008589)	csnk2a2a (ENSSGRG00000008531)	MATCAP1 (ENSSGRG00000008530)	nqo1 (ENSSGRG00000008520)	zgc:194679 (ENSSGRG00000008519)	dpep1 (ENSSGRG00000008518)	ENSSGRG00000008517	ist1 (ENSSGRG00000008484)	SLC22A31 (ENSSGRG00000008476)	ANKRD11 (ENSSGRG00000008278)	SPG7 (ENSSGRG00000007461)	cdh15 (ENSSGRG00000007444)	ACSF3 (ENSSGRG00000007442)	CBFA2T3 (ENSSGRG00000007439) ##22	ENSSGRG00000007437 ##22	trappc2l (ENSSGRG00000007434)	galns (ENSSGRG00000007427)	aprt (ENSSGRG00000007422)	aprt (ENSSGRG00000007418)	CDT1 (ENSSGRG00000007417)	PIEZO1 (ENSSGRG00000007389)	ctu2 (ENSSGRG00000007375)	RNF166 (ENSSGRG00000007369)	ENSSGRG00000007161
Common carp reference	MODERN SPECIES	6	zgc:194679 (ENSCCRG00000026289)	ENSCCRG00000080804	ENSCCRG00000022481	ENSCCRG00000073847	ist1 (ENSCCRG00000005923)	ENSCCRG00000075187	ENSCCRG00000076216	SLC22A31 (ENSCCRG00000052792)	ENSCCRG00000060713	SPG7 (ENSCCRG00000002335)	cdh15 (ENSCCRG00000074627)	ENSCCRG00000073117	ENSCCRG00000038532	ACSF3 (ENSCCRG00000078392)	ENSCCRG00000079122	CBFA2T3 (ENSCCRG00000074750) ##22	ENSCCRG00000003415	trappc2l (ENSCCRG00000038830)	galns (ENSCCRG00000033024)	CDT1 (ENSCCRG00000026904)	PIEZO1 (ENSCCRG00000079664)	RNF166 (ENSCCRG00000072154)	ENSCCRG00000080509	ENSCCRG00000056580	ENSCCRG00000011657	ENSCCRG00000015113	ENSCCRG00000076227	ENSCCRG00000078745	ENSCCRG00000017472	ENSCCRG00000065192	ENSCCRG00000044710
Cyprininae	ANCESTRAL SPECIES	284	ENSGT00940000163421.a.d.h	ENSGT00940000156938.e	ENSGT00940000159615.d	ENSGT00940000163403.a	ENSGT00940000162823.C.b	ENSGT00940000161671.ob	ENSGT00940000159903	ENSGT00500000044924.c	ENSGT00390000007453.h	ENSGT00390000007453.g.a.a	ENSGT00940000162670.k	ENSGT00940000155966.bb	ENSGT00940000156329.e	ENSGT00940000160118.f	ENSGT00940000157000.p	ENSGT00950000183176.b.e.v ##22	ENSGT00940000161325.m	ENSGT00510000047505	ENSGT00940000157787.a	ENSGT00390000017259.s.a	ENSGT00390000012337.k	ENSGT00940000157348.q	ENSGT00390000008797.a	ENSGT00950000182909.b.b.b.j	ENSGT00390000008797.b	ENSGT00950000182909.b.b.b.i	ENSGT00940000154848.b.j.a
Goldfish	MODERN SPECIES	47	drd4b (ENSCARG00000038266)	ENSCARG00000038249	ENSCARG00000038238	ADAMTS7 (ENSCARG00000035515)	ENSCARG00000035448	scamp2l (ENSCARG00000035419)	myo9aa (ENSCARG00000035181)	senp8 (ENSCARG00000035157)	ENSCARG00000035151	ist1 (ENSCARG00000035130)	SLC22A31 (ENSCARG00000035116)	ANKRD11 (ENSCARG00000035090)	SPG7 (ENSCARG00000034543)	cdh15 (ENSCARG00000034194)	ACSF3 (ENSCARG00000034042)	CBFA2T3 (ENSCARG00000035292) ##22	PABPN1L (ENSCARG00000035274)	trappc2l (ENSCARG00000035238)	galns (ENSCARG00000033794)	aprt (ENSCARG00000033617)	CDT1 (ENSCARG00000033592)	PIEZO1 (ENSCARG00000031704)	ctu2 (ENSCARG00000030987)	RNF166 (ENSCARG00000030936)	snai3 (ENSCARG00000030922)	ENSCARG00000030364	pde5ab (ENSCARG00000029696)	mad2l1 (ENSCARG00000029646)	ARSJ (ENSCARG00000029638)	camk2d1 (ENSCARG00000029535)	ANK2 (ENSCARG00000020228)
Cyprininae_a	ANCESTRAL SPECIES	94	ENSGT00940000159150	ENSGT00940000163421.a.d.h	ENSGT00940000156938.e	ENSGT00940000159615.d	ENSGT00940000163403.a	ENSGT00940000162823.C.b	ENSGT00940000161671.ob	ENSGT00940000159903	ENSGT00500000044924.c	ENSGT00390000007453.g.a.a	ENSGT00940000162670.k	ENSGT00940000155966.bb	ENSGT00940000156329.e	ENSGT00940000160118.f	ENSGT00940000157000.p	ENSGT00950000183176.b.e.v ##22	ENSGT00940000161325.m	ENSGT00510000047505.g	ENSGT00940000157787.a	ENSGT00390000017259.s.a	ENSGT00390000012337.k	ENSGT00940000157348.q	ENSGT00390000008797.a	ENSGT00950000182909.b.b.b.j	ENSGT00940000169946	ENSGT00940000154848.b.j.b.a	ENSGT00940000155475.h.b	ENSGT00940000153395.a.a	ENSGT00940000159954	ENSGT00940000155150.a.i.a	ENSGT00940000155150.a.j
Common carp reference	MODERN SPECIES		nqo1 (ENSCCRG00000063292)	zgc:194679 (ENSCCRG00000072421)	ENSCCRG00000023405	dpep1 (ENSCCRG00000067671)	ENSCCRG00000053035	sult5a1 (ENSCCRG00000023407)	ENSCCRG00000023411	ENSCCRG00000070595	dhodh (ENSCCRG00000073493)	ist1 (ENSCCRG00000067676)	SLC22A31 (ENSCCRG00000002222)	ENSCCRG00000076905	SPG7 (ENSCCRG00000001630)	cdh15 (ENSCCRG00000001492)	ACSF3 (ENSCCRG00000073352)	CBFA2T3 (ENSCCRG00000023047) ##22	PABPN1L (ENSCCRG00000023033)	trappc2l (ENSCCRG00000022748)	galns (ENSCCRG00000022672)	CDT1 (ENSCCRG00000031905)	aprt (ENSCCRG00000069045)	PIEZO1 (ENSCCRG00000025020)	ctu2 (ENSCCRG00000036199)	RNF166 (ENSCCRG00000050840)	snai3 (ENSCCRG00000005886)	ENSCCRG00000011612	ENSCCRG00000072167	ENSCCRG00000082429	ENSCCRG00000062459	ENSCCRG00000052335	ENSCCRG00000061508
Golden-line barbel	MODERN SPECIES	770	MATCAP1 (ENSSGRG00000018259)	ENSSGRG00000018262	ENSSGRG00000018272	zgc:194679 (ENSSGRG00000018273)	KCNG4 (ENSSGRG00000018274)	dpep1 (ENSSGRG00000018275)	sult5a1 (ENSSGRG00000018276)	ENSSGRG00000018277	dhodh (ENSSGRG00000018289)	ist1 (ENSSGRG00000018496)	SLC22A31 (ENSSGRG00000018541)	ANKRD11 (ENSSGRG00000018548)	SPG7 (ENSSGRG00000018600)	cdh15 (ENSSGRG00000018854)	ACSF3 (ENSSGRG00000018859)	CBFA2T3 (ENSSGRG00000018924) ##22	PABPN1L (ENSSGRG00000018926)	trappc2l (ENSSGRG00000018927)	galns (ENSSGRG00000018932)	aprt (ENSSGRG00000018937)	CDT1 (ENSSGRG00000018938)	PIEZO1 (ENSSGRG00000018952)	ctu2 (ENSSGRG00000019624)	RNF166 (ENSSGRG00000019693)	snai3 (ENSSGRG00000019695)	ENSSGRG00000019711	ENSSGRG00000020001
Zebrafish	MODERN SPECIES	22	MATCAP1 (ENSDARG00000059529)	nqo1 (ENSDARG00000010250)	zgc:194679 (ENSDARG00000073723)	ENSDARG00000051892	dpep1 (ENSDARG00000068181)	sult5a1 (ENSDARG00000007769)	ENSDARG00000051890	ENSDARG00000100098	dhodh (ENSDARG00000051889)	ist1 (ENSDARG00000051888)	SLC22A31 (ENSDARG00000078882)	ANKRD11 (ENSDARG00000051886)	SPG7 (ENSDARG00000068187)	cdh15 (ENSDARG00000068191)	ACSF3 (ENSDARG00000059503)	CBFA2T3 (ENSDARG00000079012) ##22	pabpn1l (ENSDARG00000087996)	trappc2l (ENSDARG00000111785)	galns (ENSDARG00000051853)	aprt (ENSDARG00000003519)	CDT1 (ENSDARG00000051854)	PIEZO1 (ENSDARG00000076870)	ctu2 (ENSDARG00000051851)	RNF166 (ENSDARG00000089538)	ENSDARG00000035796	snai3 (ENSDARG00000031243)	tpcn2 (ENSDARG00000100420)	ccnd1 (ENSDARG00000101637)	lto1 (ENSDARG00000104287)	fgf19 (ENSDARG00000098663)	fgf4 (ENSDARG00000105230)
Euteleosteomorpha	ANCESTRAL SPECIES	3	ENSGT00940000158943.c	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000159903	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00940000154848.b	ENSGT00390000017697.b	ENSGT00940000159836	ENSGT00940000165234	ENSGT00940000159757	ENSGT00550000074901
Protacanthopterygii	ANCESTRAL SPECIES	2	ENSGT00940000158943.c	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000159903	ENSGT00940000162823.C.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00390000017697.b	ENSGT00940000154511.a	ENSGT00940000154848.b	ENSGT00940000159836	ENSGT00940000165234	ENSGT00940000159757	ENSGT00550000074901
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	361												ENSGT00940000155966.gb.a.a	ENSGT00940000156329.c	ENSGT00940000160118.h	ENSGT00940000157000.m	ENSGT00950000183176.b.e.w.a ##22	ENSGT00940000161325.p	ENSGT00510000047505.i	ENSGT00940000157787.e	ENSGT00390000017259.bb.a	ENSGT00390000012337.f	ENSGT00940000157348.t	ENSGT00390000008797.d	ENSGT00950000182909.b.b.b.q.a	ENSGT00940000154511.a.g.a	ENSGT00940000154848.b.c.b	ENSGT00390000017697.b.eb.a.b	ENSGT00940000166897.c	ENSGT00940000157816.a.b.d	ENSGT00940000159763.p.a	ENSGT00390000010152
Huchen	MODERN SPECIES	922												SPG7 (ENSHHUG00000028401)	cdh15 (ENSHHUG00000028395)	ENSHHUG00000028394	ACSF3 (ENSHHUG00000028365)	ENSHHUG00000028358 ##22	CBFA2T3 (ENSHHUG00000028328) ##22	PABPN1L (ENSHHUG00000028326)	trappc2l (ENSHHUG00000028296)	galns (ENSHHUG00000028278)	CDT1 (ENSHHUG00000028269)	PIEZO1 (ENSHHUG00000027951)	ctu2 (ENSHHUG00000027903)	RNF166 (ENSHHUG00000027899)	ENSHHUG00000027895	ENSHHUG00000027303	ciao2b (ENSHHUG00000027227)	fgf19 (ENSHHUG00000027218)	lto1 (ENSHHUG00000027210)	ccnd1 (ENSHHUG00000027197)
Salmoninae_a	ANCESTRAL SPECIES	47										ENSGT00940000159615.l	ENSGT00940000162670.m	ENSGT00940000155966.gb.a.b	ENSGT00940000156329.d	ENSGT00940000160118.g	ENSGT00940000157000.n	ENSGT00950000183176.b.e.w.a ##22	ENSGT00940000161325.p.a	ENSGT00950000183176.b.e.x ##22	ENSGT00940000161325.o	ENSGT00510000047505.j	ENSGT00940000157787.f	ENSGT00390000017259.bb.b	ENSGT00390000012337.e	ENSGT00940000157348.s.b.b	ENSGT00390000008797.c	ENSGT00950000182909.b.b.b.q.b	ENSGT00940000154511.a.g.b	ENSGT00940000154848.b.c.a.b.a	ENSGT00390000017697.b.db	ENSGT00940000154848.b.c.a.b.b	ENSGT00390000017697.b.eb.b
Salmo	ANCESTRAL SPECIES	30	ENSGT00390000012336	ENSGT00550000074781.v	ENSGT00940000158943.c.c	ENSGT00940000153941.b.d	ENSGT00390000011359.o	ENSGT00390000007453.f	ENSGT00500000044924.b	ENSGT00940000162823.C.b	ENSGT00940000163403.c	ENSGT00940000159615.l	ENSGT00940000162670.m	ENSGT00940000155966.gb.a.b	ENSGT00940000156329.d	ENSGT00940000160118.g	ENSGT00940000157000.n	ENSGT00950000183176.b.e.w.a ##22	ENSGT00940000161325.o	ENSGT00510000047505.j	ENSGT00940000157787.f	ENSGT00390000017259.bb.b	ENSGT00390000012337.e	ENSGT00940000157348.s.a	ENSGT00390000008797.c	ENSGT00950000182909.b.b.b.r	ENSGT00950000182909.b.b.b.q.b	ENSGT00940000154511.a.g.b	ENSGT00940000154848.b.c.a.b.a	ENSGT00390000017697.b.eb.b.a	ENSGT00940000159836.b	ENSGT00940000165234	ENSGT00940000159757.m
River trout	DUPLICATION
River trout	MODERN SPECIES	21	terb2 (ENSSTUG00000043328)	sord (ENSSTUG00000043335)	APBA2 (ENSSTUG00000043474)	mcee (ENSSTUG00000044828)	mphosph10 (ENSSTUG00000044879)	ist1 (ENSSTUG00000045295)	dhodh (ENSSTUG00000045359)	ENSSTUG00000045410	sult5a1 (ENSSTUG00000045414)	dpep1 (ENSSTUG00000045430)	SLC22A31 (ENSSTUG00000045509)	ANKRD11 (ENSSTUG00000045535)	SPG7 (ENSSTUG00000045600)	cdh15 (ENSSTUG00000045921)	ACSF3 (ENSSTUG00000046084)	CBFA2T3 (ENSSTUG00000046091) ##22	PABPN1L (ENSSTUG00000046119)	trappc2l (ENSSTUG00000046130)	galns (ENSSTUG00000046166)	aprt (ENSSTUG00000046302)	CDT1 (ENSSTUG00000046321)	PIEZO1 (ENSSTUG00000046369)	ctu2 (ENSSTUG00000047105)	RNF166 (ENSSTUG00000047273)	ENSSTUG00000047282	ENSSTUG00000047335	ciao2b (ENSSTUG00000048651)	rrad (ENSSTUG00000048656)	ENSSTUG00000048660	ca7 (ENSSTUG00000048668)	nae1 (ENSSTUG00000048681)
River trout	MODERN SPECIES	3	sord (ENSSTUG00000008973)	ENSSTUG00000008029	mcee (ENSSTUG00000007980)	mphosph10 (ENSSTUG00000007908)	ist1 (ENSSTUG00000007874)	dhodh (ENSSTUG00000007863)	ENSSTUG00000007861	ENSSTUG00000007820	sult5a1 (ENSSTUG00000007809)	dpep1 (ENSSTUG00000007735)	SLC22A31 (ENSSTUG00000007721)	ANKRD11 (ENSSTUG00000007663)	SPG7 (ENSSTUG00000007014)	cdh15 (ENSSTUG00000006850)	ACSF3 (ENSSTUG00000006817)	CBFA2T3 (ENSSTUG00000006803) ##22	PABPN1L (ENSSTUG00000006789)	trappc2l (ENSSTUG00000006731)	galns (ENSSTUG00000006687)	aprt (ENSSTUG00000006682)	CDT1 (ENSSTUG00000006636)	PIEZO1 (ENSSTUG00000005320)	ctu2 (ENSSTUG00000005038)	RNF166 (ENSSTUG00000005006)	ENSSTUG00000004999	ENSSTUG00000002748	ciao2b (ENSSTUG00000002626)	lto1 (ENSSTUG00000002591)	ccnd1 (ENSSTUG00000002561)	ENSSTUG00000002558	tpcn2 (ENSSTUG00000002487)
Atlantic salmon	MODERN SPECIES	18	ENSSSAG00000069106	ENSSSAG00000082182	mcee (ENSSSAG00000069085)	mphosph10 (ENSSSAG00000069030)	K0174 (ENSSSAG00000069004)	dhodh (ENSSSAG00000068954)	ENSSSAG00000111907	sult5a1 (ENSSSAG00000068805)	dpep1 (ENSSSAG00000095035)	ENSSSAG00000112863	SLC22A31 (ENSSSAG00000102965)	ENSSSAG00000068479	SPG7 (ENSSSAG00000066856)	cdh15 (ENSSSAG00000066810)	ACSF3 (ENSSSAG00000066800)	CBFA2T3 (ENSSSAG00000088441) ##22	trappc2l (ENSSSAG00000066740)	galns (ENSSSAG00000066659)	aprt (ENSSSAG00000088047)	CDT1 (ENSSSAG00000066578)	PIEZO1 (ENSSSAG00000066212)	ctu2 (ENSSSAG00000093633)	RNF166 (ENSSSAG00000066118)	ENSSSAG00000100132	ENSSSAG00000063294	ENSSSAG00000092585	ENSSSAG00000063268	ciao2b (ENSSSAG00000066108)	rrad (ENSSSAG00000063264)	ENSSSAG00000063252	ca7 (ENSSSAG00000063250)
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00390000012336	ENSGT00550000074781.u.a	ENSGT00940000158943.c.c	ENSGT00940000153941.b.d	ENSGT00390000011359.o	ENSGT00390000007453.f	ENSGT00500000044924.a	ENSGT00940000159903	ENSGT00940000163403.c.a	ENSGT00940000159615.l	ENSGT00940000162670.m	ENSGT00940000155966.gb.a.b	ENSGT00940000156329.d	ENSGT00940000160118.g	ENSGT00940000157000.n	ENSGT00950000183176.b.e.w.a ##22	ENSGT00940000161325.p.a	ENSGT00510000047505.j	ENSGT00940000157787.f	ENSGT00390000017259.bb.b	ENSGT00390000012337.e	ENSGT00940000157348.s.b.b	ENSGT00390000008797.c	ENSGT00950000182909.b.b.b.q.b	ENSGT00940000154511.a.g.b	ENSGT00940000154848.b.c.a.b.a	ENSGT00390000017697.b.db	ENSGT00940000154848.b.c.a.b.b	ENSGT00940000159836.b	ENSGT00940000165234	ENSGT00940000159757.m
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	27	ENSOMYG00000029390	dhodh (ENSOMYG00000029214)	ENSOMYG00000029192	sult5a1 (ENSOMYG00000029128)	ENSOMYG00000029054	ENSOMYG00000049632	ENSOMYG00000029006	SLC22A31 (ENSOMYG00000028926)	ENSOMYG00000068148	ENSOMYG00000053462	ANKRD11 (ENSOMYG00000021548)	SPG7 (ENSOMYG00000020459)	cdh15 (ENSOMYG00000020290)	ACSF3 (ENSOMYG00000020259)	ENSOMYG00000066633	CBFA2T3 (ENSOMYG00000020152) ##22	PABPN1L (ENSOMYG00000020123)	trappc2l (ENSOMYG00000020110)	galns (ENSOMYG00000019989)	aprt (ENSOMYG00000019959)	CDT1 (ENSOMYG00000019951)	PIEZO1 (ENSOMYG00000019759)	ctu2 (ENSOMYG00000019324)	RNF166 (ENSOMYG00000064303)	ENSOMYG00000048797	ENSOMYG00000019206	ENSOMYG00000015527	ciao2b (ENSOMYG00000019191)	rrad (ENSOMYG00000015257)	ENSOMYG00000015246	ca7 (ENSOMYG00000015221)
Rainbow trout	MODERN SPECIES	18	sord (ENSOMYG00000042629)	ENSOMYG00000042207	mcee (ENSOMYG00000042122)	mphosph10 (ENSOMYG00000042099)	ist1 (ENSOMYG00000049934)	dhodh (ENSOMYG00000042076)	ENSOMYG00000042061	sult5a1 (ENSOMYG00000042052)	dpep1 (ENSOMYG00000042022)	SLC22A31 (ENSOMYG00000042005)	ANKRD11 (ENSOMYG00000041973)	SPG7 (ENSOMYG00000041652)	cdh15 (ENSOMYG00000041577)	ACSF3 (ENSOMYG00000041503)	ENSOMYG00000063445	CBFA2T3 (ENSOMYG00000041484) ##22	PABPN1L (ENSOMYG00000041475)	trappc2l (ENSOMYG00000041458)	galns (ENSOMYG00000041454)	aprt (ENSOMYG00000041443)	CDT1 (ENSOMYG00000041432)	PIEZO1 (ENSOMYG00000041383)	ctu2 (ENSOMYG00000041336)	RNF166 (ENSOMYG00000054129)	ENSOMYG00000041324	ENSOMYG00000038855	ciao2b (ENSOMYG00000038177)	lto1 (ENSOMYG00000038146)	ENSOMYG00000038167	ENSOMYG00000066369	tpcn2 (ENSOMYG00000038011)
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00390000012336	ENSGT00550000074781.u.a	ENSGT00940000158943.c.c	ENSGT00940000153941.b.d	ENSGT00390000011359.o	ENSGT00390000007453.f	ENSGT00500000044924.a	ENSGT00940000159903	ENSGT00940000163403.c.a	ENSGT00940000159615.l	ENSGT00940000162670.m	ENSGT00940000155966.gb.a.b	ENSGT00940000156329.d	ENSGT00940000160118.g	ENSGT00940000157000.n	ENSGT00950000183176.b.e.w.a ##22	ENSGT00940000161325.p.a	ENSGT00950000183176.b.e.x ##22	ENSGT00940000161325.o	ENSGT00510000047505.j	ENSGT00940000157787.f	ENSGT00390000017259.bb.b	ENSGT00390000012337.e	ENSGT00940000157348.s.b.b	ENSGT00390000008797.c	ENSGT00950000182909.b.b.b.q.b	ENSGT00950000182909.b.b.b.q.a.b	ENSGT00940000154511.a.g.b	ENSGT00940000154848.b.c.a.b.a	ENSGT00390000017697.b.db	ENSGT00940000154848.b.c.a.b.b
Coho salmon	MODERN SPECIES	22	sord (ENSOKIG00005018753)	APBA2 (ENSOKIG00005016807)	mcee (ENSOKIG00005016720)	mphosph10 (ENSOKIG00005016706)	ENSOKIG00005016666	dhodh (ENSOKIG00005016614)	ENSOKIG00005016603	sult5a1 (ENSOKIG00005016592)	ENSOKIG00005016590	DPEP1 (ENSOKIG00005016462)	SLC22A31 (ENSOKIG00005016449)	ANKRD11 (ENSOKIG00005016404)	SPG7 (ENSOKIG00005015473)	cdh15 (ENSOKIG00005015045)	ACSF3 (ENSOKIG00005015004)	CBFA2T3 (ENSOKIG00005014998) ##22	PABPN1L (ENSOKIG00005014985)	trappc2l (ENSOKIG00005014931)	galns (ENSOKIG00005014862)	aprt (ENSOKIG00005014830)	CDT1 (ENSOKIG00005014823)	PIEZO1 (ENSOKIG00005014562)	ctu2 (ENSOKIG00005014421)	RNF166 (ENSOKIG00005014407)	ENSOKIG00005014402	ciao2b (ENSOKIG00005014377)	ENSOKIG00005010939	rrad (ENSOKIG00005010785)	ENSOKIG00005010771	ca7 (ENSOKIG00005010755)	nae1 (ENSOKIG00005010631)
Chinook salmon	MODERN SPECIES	28	TJP1 (ENSOTSG00005006472)	sord (ENSOTSG00005006446)	APBA2 (ENSOTSG00005005682)	mcee (ENSOTSG00005005678)	mphosph10 (ENSOTSG00005005677)	ist1 (ENSOTSG00005005675)	dhodh (ENSOTSG00005005662)	sult5a1 (ENSOTSG00005005659)	sult5a1 (ENSOTSG00005005657)	SLC22A31 (ENSOTSG00005005656)	dpep1 (ENSOTSG00005005651)	ANKRD11 (ENSOTSG00005005648)	SPG7 (ENSOTSG00005004860)	cdh15 (ENSOTSG00005004851)	ACSF3 (ENSOTSG00005004850)	CBFA2T3 (ENSOTSG00005004847) ##22	ENSOTSG00005004845 ##22	PABPN1L (ENSOTSG00005004843)	trappc2l (ENSOTSG00005004791)	galns (ENSOTSG00005004620)	aprt (ENSOTSG00005004616)	CDT1 (ENSOTSG00005004615)	PIEZO1 (ENSOTSG00005004271)	RNF166 (ENSOTSG00005004261)	ENSOTSG00005004259	ctu2 (ENSOTSG00005002557)	ENSOTSG00005002544	RNF166 (ENSOTSG00005002542)	ENSOTSG00005002538	ENSOTSG00005000741	ciao2b (ENSOTSG00005000718)
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000183176.b.e.w.b.a ##22
Huchen	MODERN SPECIES	922											SPG7 (ENSHHUG00000028401)	cdh15 (ENSHHUG00000028395)	ENSHHUG00000028394	ACSF3 (ENSHHUG00000028365)	ENSHHUG00000028358 ##22	CBFA2T3 (ENSHHUG00000028328) ##22	PABPN1L (ENSHHUG00000028326)	trappc2l (ENSHHUG00000028296)	galns (ENSHHUG00000028278)	CDT1 (ENSHHUG00000028269)	PIEZO1 (ENSHHUG00000027951)	ctu2 (ENSHHUG00000027903)	RNF166 (ENSHHUG00000027899)	ENSHHUG00000027895	ENSHHUG00000027303	ciao2b (ENSHHUG00000027227)	fgf19 (ENSHHUG00000027218)	lto1 (ENSHHUG00000027210)	ccnd1 (ENSHHUG00000027197)
Salmoninae_a	ANCESTRAL SPECIES	76	ENSGT00940000155164.a.b.a	ENSGT00550000074781.u.b	ENSGT00940000158943.c.d	ENSGT00940000153941.b.c	ENSGT00390000011359.p	ENSGT00390000007453.e	ENSGT00500000044924.b	ENSGT00940000162823.C.b	ENSGT00940000163403.d	ENSGT00940000159615.k	ENSGT00940000162670.n	ENSGT00940000155966.gb.a.a	ENSGT00940000156329.c	ENSGT00940000160118.h	ENSGT00940000157000.m	ENSGT00950000183176.b.e.w.b.a ##22	ENSGT00940000161325.p.b	ENSGT00510000047505.i	ENSGT00940000157787.e	ENSGT00390000017259.bb.a	ENSGT00390000012337.f	ENSGT00940000157348.t	ENSGT00390000008797.d	ENSGT00950000182909.b.b.b.q.a.a	ENSGT00940000154511.a.g.a	ENSGT00940000154848.b.c.b	ENSGT00390000017697.b.eb.a.b	ENSGT00940000166897.c	ENSGT00940000157816.a.b.d	ENSGT00940000159763.p.a	ENSGT00390000010152.a
Oncorhynchus	ANCESTRAL SPECIES	32	ENSGT00940000155164.a.b.a	ENSGT00550000074781.u.b	ENSGT00940000158943.c.d	ENSGT00940000153941.b.c	ENSGT00390000011359.p	ENSGT00390000007453.e	ENSGT00500000044924.b	ENSGT00940000162823.C.b	ENSGT00940000163403.d	ENSGT00940000159615.k	ENSGT00940000162670.n	ENSGT00940000155966.gb.b	ENSGT00940000156329.c	ENSGT00940000160118.h	ENSGT00940000157000.m	ENSGT00950000183176.b.e.w.b.a ##22	ENSGT00940000161325.p.b	ENSGT00510000047505.i	ENSGT00940000157787.e	ENSGT00390000017259.bb.a	ENSGT00390000012337.f	ENSGT00940000157348.t	ENSGT00390000008797.d	ENSGT00950000182909.b.b.b.r	ENSGT00950000182909.b.b.b.q.a.a	ENSGT00940000154511.a.g.a	ENSGT00940000154848.b.c.b	ENSGT00390000017697.b.eb.a.b	ENSGT00940000166897.c	ENSGT00940000157816.a.b.d	ENSGT00940000159763.p.a
Oncorhynchus_a	ANCESTRAL SPECIES	28	ENSGT00940000155164.a.b.a	ENSGT00550000074781.u.b	ENSGT00940000158943.c.d	ENSGT00940000153941.b.c	ENSGT00390000011359.p	ENSGT00390000007453.e	ENSGT00500000044924.b	ENSGT00940000162823.C.b	ENSGT00940000163403.d	ENSGT00940000159615.k	ENSGT00940000162670.n	ENSGT00940000155966.gb.a.a	ENSGT00940000156329.c	ENSGT00940000160118.h	ENSGT00940000157000.m	ENSGT00950000183176.b.e.w.b.a ##22	ENSGT00940000161325.p.b	ENSGT00510000047505.i	ENSGT00940000157787.e	ENSGT00390000017259.bb.a	ENSGT00390000012337.f	ENSGT00940000157348.t	ENSGT00390000008797.d	ENSGT00950000182909.b.b.b.q.a.a	ENSGT00940000154511.a.g.a	ENSGT00940000154848.b.c.b	ENSGT00390000017697.b.eb.a.a	ENSGT00940000166897.c	ENSGT00940000157816.a.b.d	ENSGT00940000159763.p.a	ENSGT00390000010152.a
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	335															ENSOTSG00005034118 ##22	ENSOTSG00005034117 ##22	PABPN1L (ENSOTSG00005034116)	trappc2l (ENSOTSG00005034088)	galns (ENSOTSG00005034087)	aprt (ENSOTSG00005034085)	CDT1 (ENSOTSG00005034084)	PIEZO1 (ENSOTSG00005033846)
Chinook salmon	MODERN SPECIES	335																ENSOTSG00005034118 ##22	ENSOTSG00005034117 ##22	PABPN1L (ENSOTSG00005034116)	trappc2l (ENSOTSG00005034088)	galns (ENSOTSG00005034087)	aprt (ENSOTSG00005034085)	CDT1 (ENSOTSG00005034084)	PIEZO1 (ENSOTSG00005033846)
Coho salmon	MODERN SPECIES	28	TJP1 (ENSOKIG00005015853)	sord (ENSOKIG00005015700)	APBA2 (ENSOKIG00005015397)	mcee (ENSOKIG00005015343)	mphosph10 (ENSOKIG00005015230)	ist1 (ENSOKIG00005015186)	ENSOKIG00005015150	ENSOKIG00005015138	sult5a1 (ENSOKIG00005015128)	dpep1 (ENSOKIG00005015101)	SLC22A31 (ENSOKIG00005015090)	ANKRD11 (ENSOKIG00005015062)	SPG7 (ENSOKIG00005014317)	cdh15 (ENSOKIG00005014179)	ACSF3 (ENSOKIG00005013666)	CBFA2T3 (ENSOKIG00005013581) ##22	PABPN1L (ENSOKIG00005013564)	trappc2l (ENSOKIG00005013531)	galns (ENSOKIG00005013489)	aprt (ENSOKIG00005013478)	CDT1 (ENSOKIG00005013468)	PIEZO1 (ENSOKIG00005012256)	ctu2 (ENSOKIG00005012143)	RNF166 (ENSOKIG00005012129)	ENSOKIG00005012121	ENSOKIG00005011040	CIAO2B (ENSOKIG00005010965)	lto1 (ENSOKIG00005010951)	CCND1 (ENSOKIG00005010929)	tpcn2 (ENSOKIG00005010826)	dhcr7 (ENSOKIG00005010778)
Salmo	ANCESTRAL SPECIES	27	ENSGT00530000063335.A.pb.a	ENSGT00940000155164.a.b.a	ENSGT00550000074781.u.b	ENSGT00940000158943.c.d	ENSGT00940000153941.b.c	ENSGT00390000011359.p	ENSGT00390000007453.e	ENSGT00500000044924.a	ENSGT00940000163403.d	ENSGT00940000159615.k	ENSGT00940000162670.n	ENSGT00940000155966.gb.a.a	ENSGT00940000156329.c	ENSGT00940000160118.h	ENSGT00940000157000.m	ENSGT00950000183176.b.e.w.b.a ##22	ENSGT00940000161325.p.b	ENSGT00510000047505.i	ENSGT00940000157787.e	ENSGT00390000017259.bb.a	ENSGT00390000012337.f	ENSGT00940000157348.t	ENSGT00390000008797.d	ENSGT00950000182909.b.b.b.q.a.a	ENSGT00940000154511.a.g.a	ENSGT00940000154848.b.c.b	ENSGT00390000017697.b.eb.b.b	ENSGT00940000166897.c	ENSGT00940000157816.a.b.d	ENSGT00940000159763.p.a	ENSGT00390000010152.a
Atlantic salmon	MODERN SPECIES	2	ENSSSAG00000074535	sord (ENSSSAG00000074503)	ENSSSAG00000073464	mphosph10 (ENSSSAG00000073294)	mcee (ENSSSAG00000053296)	ist1 (ENSSSAG00000073269)	dhodh (ENSSSAG00000073250)	ENSSSAG00000114046	sult5a1 (ENSSSAG00000073243)	dpep1 (ENSSSAG00000073232)	SLC22A31 (ENSSSAG00000073225)	ENSSSAG00000073160	SPG7 (ENSSSAG00000072817)	cdh15 (ENSSSAG00000072707)	ACSF3 (ENSSSAG00000072585)	CBFA2T3 (ENSSSAG00000109906) ##22	trappc2l (ENSSSAG00000072525)	PABPN1L (ENSSSAG00000072555)	galns (ENSSSAG00000072515)	aprt (ENSSSAG00000111408)	CDT1 (ENSSSAG00000072506)	PIEZO1 (ENSSSAG00000072401)	ctu2 (ENSSSAG00000072330)	RNF166 (ENSSSAG00000072323)	ENSSSAG00000066114	ENSSSAG00000072016	ENSSSAG00000071996	lto1 (ENSSSAG00000071982)	ENSSSAG00000108373	tpcn2 (ENSSSAG00000070595)	ENSSSAG00000102017
Salmoninae	ANCESTRAL SPECIES	80									ENSGT00940000159615.l	ENSGT00940000162670.m	ENSGT00940000155966.gb.b	ENSGT00940000155966.gb.a.b	ENSGT00940000156329.d	ENSGT00940000160118.g	ENSGT00940000157000.n	ENSGT00950000183176.b.e.w.b.b ##22	ENSGT00940000161325.o	ENSGT00510000047505.j	ENSGT00940000157787.f	ENSGT00390000017259.bb.b	ENSGT00390000012337.e	ENSGT00940000157348.s.b.b	ENSGT00390000008797.c	ENSGT00950000182909.b.b.b.q.b	ENSGT00940000154511.a.g.b	ENSGT00940000154848.b.c.a.b.a	ENSGT00390000017697.b.eb.b	ENSGT00390000017697.b.eb.a.a	ENSGT00940000154848.b.c.a.b.b	ENSGT00390000017697.b.db	ENSGT00940000159836.b
Huchen	MODERN SPECIES	1580													SPG7 (ENSHHUG00000051137)	cdh15 (ENSHHUG00000051161)	ACSF3 (ENSHHUG00000051185)	CBFA2T3 (ENSHHUG00000051205) ##22	PABPN1L (ENSHHUG00000051243)	trappc2l (ENSHHUG00000051249)	galns (ENSHHUG00000051304)	aprt (ENSHHUG00000051329)	CDT1 (ENSHHUG00000051330)
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000183176.b.e.x ##22
Salmoninae_a	ANCESTRAL SPECIES	47								ENSGT00940000159615.l	ENSGT00940000162670.m	ENSGT00940000155966.gb.a.b	ENSGT00940000156329.d	ENSGT00940000160118.g	ENSGT00940000157000.n	ENSGT00950000183176.b.e.w.a ##22	ENSGT00940000161325.p.a	ENSGT00950000183176.b.e.x ##22	ENSGT00940000161325.o	ENSGT00510000047505.j	ENSGT00940000157787.f	ENSGT00390000017259.bb.b	ENSGT00390000012337.e	ENSGT00940000157348.s.b.b	ENSGT00390000008797.c	ENSGT00950000182909.b.b.b.q.b	ENSGT00940000154511.a.g.b	ENSGT00940000154848.b.c.a.b.a	ENSGT00390000017697.b.db	ENSGT00940000154848.b.c.a.b.b	ENSGT00390000017697.b.eb.b	ENSGT00940000159836.b	ENSGT00940000165234
Oncorhynchus	ANCESTRAL SPECIES	445																ENSGT00950000183176.b.e.x ##22	ENSGT00940000161325.o
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00940000158943.c.c	ENSGT00940000153941.b.d	ENSGT00390000011359.o	ENSGT00390000007453.f	ENSGT00500000044924.a	ENSGT00940000159903	ENSGT00940000163403.c.a	ENSGT00940000159615.l	ENSGT00940000162670.m	ENSGT00940000155966.gb.a.b	ENSGT00940000156329.d	ENSGT00940000160118.g	ENSGT00940000157000.n	ENSGT00950000183176.b.e.w.a ##22	ENSGT00940000161325.p.a	ENSGT00950000183176.b.e.x ##22	ENSGT00940000161325.o	ENSGT00510000047505.j	ENSGT00940000157787.f	ENSGT00390000017259.bb.b	ENSGT00390000012337.e	ENSGT00940000157348.s.b.b	ENSGT00390000008797.c	ENSGT00950000182909.b.b.b.q.b	ENSGT00950000182909.b.b.b.q.a.b	ENSGT00940000154511.a.g.b	ENSGT00940000154848.b.c.a.b.a	ENSGT00390000017697.b.db	ENSGT00940000154848.b.c.a.b.b	ENSGT00940000159836.b	ENSGT00940000165234
Chinook salmon	MODERN SPECIES	28	sord (ENSOTSG00005006446)	APBA2 (ENSOTSG00005005682)	mcee (ENSOTSG00005005678)	mphosph10 (ENSOTSG00005005677)	ist1 (ENSOTSG00005005675)	dhodh (ENSOTSG00005005662)	sult5a1 (ENSOTSG00005005659)	sult5a1 (ENSOTSG00005005657)	SLC22A31 (ENSOTSG00005005656)	dpep1 (ENSOTSG00005005651)	ANKRD11 (ENSOTSG00005005648)	SPG7 (ENSOTSG00005004860)	cdh15 (ENSOTSG00005004851)	ACSF3 (ENSOTSG00005004850)	CBFA2T3 (ENSOTSG00005004847) ##22	ENSOTSG00005004845 ##22	PABPN1L (ENSOTSG00005004843)	trappc2l (ENSOTSG00005004791)	galns (ENSOTSG00005004620)	aprt (ENSOTSG00005004616)	CDT1 (ENSOTSG00005004615)	PIEZO1 (ENSOTSG00005004271)	RNF166 (ENSOTSG00005004261)	ENSOTSG00005004259	ctu2 (ENSOTSG00005002557)	ENSOTSG00005002544	RNF166 (ENSOTSG00005002542)	ENSOTSG00005002538	ENSOTSG00005000741	ciao2b (ENSOTSG00005000718)	ENSOTSG00005000709
Northern pike	MODERN SPECIES	1	terb2 (ENSELUG00000017770)	sord (ENSELUG00000017847)	APBA2 (ENSELUG00000017912)	mcee (ENSELUG00000017936)	mphosph10 (ENSELUG00000017942)	ist1 (ENSELUG00000017983)	dhodh (ENSELUG00000018016)	ENSELUG00000018053	sult5a1 (ENSELUG00000001375)	dpep1 (ENSELUG00000018110)	SLC22A31 (ENSELUG00000018139)	ANKRD11 (ENSELUG00000000753)	SPG7 (ENSELUG00000000761)	cdh15 (ENSELUG00000018220)	ACSF3 (ENSELUG00000018266)	CBFA2T3 (ENSELUG00000000775) ##22	PABPN1L (ENSELUG00000018385)	trappc2l (ENSELUG00000018489)	galns (ENSELUG00000018586)	aprt (ENSELUG00000028541)	CDT1 (ENSELUG00000018509)	PIEZO1 (ENSELUG00000018690)	ctu2 (ENSELUG00000018711)	RNF166 (ENSELUG00000034401)	ENSELUG00000018742	cdh1 (ENSELUG00000018753)	ciao2b (ENSELUG00000018766)	rrad (ENSELUG00000026901)	ENSELUG00000009882	ca7 (ENSELUG00000025690)	nae1 (ENSELUG00000009810)
Acanthomorphata	ANCESTRAL SPECIES	68	ENSGT00940000158943.c	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000159903	ENSGT00940000162823.C.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000157787	ENSGT00940000175054	ENSGT00940000160432	ENSGT00940000162264	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b	ENSGT00940000156459.k	ENSGT00690000101915.i.b
Cod	MODERN SPECIES	5	ENSGMOG00000014900	ENSGMOG00000014942	ENSGMOG00000014993	crybgx (ENSGMOG00000015010)	ENSGMOG00000015022	dis3l (ENSGMOG00000003012)	ENSGMOG00000011768	ENSGMOG00000004096	ENSGMOG00000004071	ENSGMOG00000004049	ENSGMOG00000035369	ENSGMOG00000035938	ENSGMOG00000001565	cdh15 (ENSGMOG00000001534)	ACSF3 (ENSGMOG00000001508)	CBFA2T3 (ENSGMOG00000001484) ##22	PABPN1L (ENSGMOG00000001475)	trappc2l (ENSGMOG00000001406)	galns (ENSGMOG00000001371)	cmtm3 (ENSGMOG00000001358)	dync1li2 (ENSGMOG00000001336)	nae1 (ENSGMOG00000001307)	ENSGMOG00000033842	ca7 (ENSGMOG00000001295)	ENSGMOG00000001257	rrad (ENSGMOG00000001251)	ENSGMOG00000032564	ENSGMOG00000028160	nsun3 (ENSGMOG00000028910)	ENSGMOG00000002500	arl6 (ENSGMOG00000036908)
Euacanthomorphacea	ANCESTRAL SPECIES	25	ENSGT00940000158943.c	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000159903	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b	ENSGT00940000156459.k	ENSGT00690000101915.i.b	ENSGT00940000161074.b
Pinecone sodierfish	MODERN SPECIES	17	terb2 (ENSMMDG00005006979)	sord (ENSMMDG00005006969)	APBA2 (ENSMMDG00005006967)	mcee (ENSMMDG00005006965)	mphosph10 (ENSMMDG00005006955)	ist1 (ENSMMDG00005006952)	dhodh (ENSMMDG00005006943)	ENSMMDG00005006883	sult5a1 (ENSMMDG00005006838)	dpep1 (ENSMMDG00005006836)	SLC22A31 (ENSMMDG00005006831)	ANKRD11 (ENSMMDG00005006780)	SPG7 (ENSMMDG00005005518)	cdh15 (ENSMMDG00005005445)	ACSF3 (ENSMMDG00005005280)	CBFA2T3 (ENSMMDG00005003611) ##22	PABPN1L (ENSMMDG00005003570)	trappc2l (ENSMMDG00005003550)	galns (ENSMMDG00005003469)	ENSMMDG00005003457	cmtm3 (ENSMMDG00005003454)	cmtm4 (ENSMMDG00005003452)	dync1li2 (ENSMMDG00005003437)	nae1 (ENSMMDG00005003374)	ca7 (ENSMMDG00005003344)	rrad (ENSMMDG00005003339)	atp5mc3b (ENSMMDG00005003232)	nsun3 (ENSMMDG00005003224)	EPHA6 (ENSMMDG00005003198)	arl6 (ENSMMDG00005003179)	SLC5A7 (ENSMMDG00005003171)
Percomorphaceae	ANCESTRAL SPECIES	15	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000159903	ENSGT00940000162823.C.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b	ENSGT00940000156459.k	ENSGT00690000101915.i.b
Tiger tail seahorse	MODERN SPECIES	256	zdhhc13 (ENSHCOG00000005101)	mpped2a (ENSHCOG00000005088)	ENSHCOG00000005065	ENSHCOG00000000830	NR2E3 (ENSHCOG00000000127)	dhodh (ENSHCOG00000004903)	ENSHCOG00000004872	dpep1 (ENSHCOG00000004863)	sult5a1 (ENSHCOG00000004854)	SLC22A31 (ENSHCOG00000004838)	ENSHCOG00000004814	ANKRD11 (ENSHCOG00000004805)	SPG7 (ENSHCOG00000004772)	cdh15 (ENSHCOG00000004721)	ACSF3 (ENSHCOG00000004671)	CBFA2T3 (ENSHCOG00000004595) ##22	PABPN1L (ENSHCOG00000004151)	trappc2l (ENSHCOG00000004141)	galns (ENSHCOG00000004126)	cmtm3 (ENSHCOG00000004082)	ENSHCOG00000004076	cmtm4 (ENSHCOG00000004065)	dync1li2 (ENSHCOG00000004056)	ENSHCOG00000004046	nae1 (ENSHCOG00000004030)	ca7 (ENSHCOG00000003982)	ENSHCOG00000003865	rrad (ENSHCOG00000003823)	nsun3 (ENSHCOG00000003817)	atp5mc3b (ENSHCOG00000003797)	ENSHCOG00000003791
Percomorphaceae_B	ANCESTRAL SPECIES	12	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000159903	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Ovalentaria	ANCESTRAL SPECIES	17	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000178658	ENSGT00500000044924	ENSGT00940000159903	ENSGT00940000162823.C.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Atherinomorphae	ANCESTRAL SPECIES	8	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000159903	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Oryzias	ANCESTRAL SPECIES	13	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00500000044924	ENSGT00940000159903	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670.t	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b	ENSGT00940000156459.k
Oryzias_a	ANCESTRAL SPECIES	6	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00500000044924	ENSGT00940000161671	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670.t	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b	ENSGT00940000156459.k
Chinese medaka	MODERN SPECIES	72	lin7c (ENSOSIG00000010762)	rplp2l (ENSOSIG00000010761)	ENSOSIG00000010759	mcee (ENSOSIG00000010758)	mphosph10 (ENSOSIG00000010150)	ist1 (ENSOSIG00000010130)	dhodh (ENSOSIG00000009691)	ENSOSIG00000009687	ENSOSIG00000009686	dpep1 (ENSOSIG00000009650)	SLC22A31 (ENSOSIG00000009643)	ANKRD11 (ENSOSIG00000009586)	SPG7 (ENSOSIG00000006899)	cdh15 (ENSOSIG00000006874)	ACSF3 (ENSOSIG00000006824)	CBFA2T3 (ENSOSIG00000006821) ##22	PABPN1L (ENSOSIG00000006820)	trappc2l (ENSOSIG00000006819)	galns (ENSOSIG00000006013)	cmtm3 (ENSOSIG00000006007)	cmtm4 (ENSOSIG00000006006)	dync1li2 (ENSOSIG00000004557)	nae1 (ENSOSIG00000004455)	ca7 (ENSOSIG00000004449)	ENSOSIG00000004447	ENSOSIG00000004435	rrad (ENSOSIG00000004427)	nsun3 (ENSOSIG00000004423)	EPHA6 (ENSOSIG00000003921)	arl6 (ENSOSIG00000003877)	SLC5A7 (ENSOSIG00000003855)
Japanese Medaka HdrR	MODERN SPECIES	17	mcee (ENSORLG00000022009)	ENSORLG00000028726	mphosph10 (ENSORLG00000005840)	ist1 (ENSORLG00000005825)	dhodh (ENSORLG00000005804)	ENSORLG00000005792	ENSORLG00000028170	sult5a1 (ENSORLG00000005774)	dpep1 (ENSORLG00000005754)	SLC22A31 (ENSORLG00000005729)	ANKRD11 (ENSORLG00000005698)	SPG7 (ENSORLG00000005689)	cdh15 (ENSORLG00000005633)	ACSF3 (ENSORLG00000005603)	ENSORLG00000029970	CBFA2T3 (ENSORLG00000005580) ##22	trappc2l (ENSORLG00000005528)	PABPN1L (ENSORLG00000026560)	galns (ENSORLG00000005520)	cmtm3 (ENSORLG00000027230)	cmtm4 (ENSORLG00000005466)	dync1li2 (ENSORLG00000005459)	ENSORLG00000005433	nae1 (ENSORLG00000005429)	ca7 (ENSORLG00000028995)	ENSORLG00000027526	ENSORLG00000005424	rrad (ENSORLG00000024517)	ENSORLG00000026953	nsun3 (ENSORLG00000005378)	ENSORLG00000005357
Oryzias_b	ANCESTRAL SPECIES	5	ENSGT00940000153222.a.b.b.b.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00500000044924	ENSGT00940000159903	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670.t	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b	ENSGT00940000156459.k
Javanese ricefish	DUPLICATION
Javanese ricefish	DUPLICATION
Javanese ricefish	MODERN SPECIES	17	mphosph10 (ENSOJAG00000010548)	mcee (ENSOJAG00000010503)	ist1 (ENSOJAG00000010468)	dhodh (ENSOJAG00000010343)	ENSOJAG00000010323	sult5a1 (ENSOJAG00000010316)	dpep1 (ENSOJAG00000010034)	ENSOJAG00000009985	SLC22A31 (ENSOJAG00000009954)	ANKRD11 (ENSOJAG00000009841)	SPG7 (ENSOJAG00000009187)	cdh15 (ENSOJAG00000008744)	ACSF3 (ENSOJAG00000008692)	CBFA2T3 (ENSOJAG00000008634) ##22	ENSOJAG00000008620 ##22	ENSOJAG00000008599 ##22	PABPN1L (ENSOJAG00000008590)	trappc2l (ENSOJAG00000008496)	galns (ENSOJAG00000008107)	cmtm3 (ENSOJAG00000008080)	cmtm4 (ENSOJAG00000008072)	dync1li2 (ENSOJAG00000007971)	ENSOJAG00000007937	nae1 (ENSOJAG00000007695)	ca7 (ENSOJAG00000007673)	ENSOJAG00000007661	rrad (ENSOJAG00000007637)	ENSOJAG00000007568	nsun3 (ENSOJAG00000007547)	ENSOJAG00000007321	arl6 (ENSOJAG00000007254)
Javanese ricefish	MODERN SPECIES	17	ENSOJAG00000010806	mphosph10 (ENSOJAG00000010548)	mcee (ENSOJAG00000010503)	ist1 (ENSOJAG00000010468)	dhodh (ENSOJAG00000010343)	ENSOJAG00000010323	sult5a1 (ENSOJAG00000010316)	dpep1 (ENSOJAG00000010034)	ENSOJAG00000009985	SLC22A31 (ENSOJAG00000009954)	ANKRD11 (ENSOJAG00000009841)	SPG7 (ENSOJAG00000009187)	cdh15 (ENSOJAG00000008744)	ACSF3 (ENSOJAG00000008692)	CBFA2T3 (ENSOJAG00000008634) ##22	ENSOJAG00000008620 ##22	ENSOJAG00000008599 ##22	PABPN1L (ENSOJAG00000008590)	trappc2l (ENSOJAG00000008496)	galns (ENSOJAG00000008107)	cmtm3 (ENSOJAG00000008080)	cmtm4 (ENSOJAG00000008072)	dync1li2 (ENSOJAG00000007971)	ENSOJAG00000007937	nae1 (ENSOJAG00000007695)	ca7 (ENSOJAG00000007673)	ENSOJAG00000007661	rrad (ENSOJAG00000007637)	ENSOJAG00000007568	nsun3 (ENSOJAG00000007547)	ENSOJAG00000007321
Javanese ricefish	MODERN SPECIES	17	lin7c (ENSOJAG00000010823)	ENSOJAG00000010806	mphosph10 (ENSOJAG00000010548)	mcee (ENSOJAG00000010503)	ist1 (ENSOJAG00000010468)	dhodh (ENSOJAG00000010343)	ENSOJAG00000010323	sult5a1 (ENSOJAG00000010316)	dpep1 (ENSOJAG00000010034)	ENSOJAG00000009985	SLC22A31 (ENSOJAG00000009954)	ANKRD11 (ENSOJAG00000009841)	SPG7 (ENSOJAG00000009187)	cdh15 (ENSOJAG00000008744)	ACSF3 (ENSOJAG00000008692)	CBFA2T3 (ENSOJAG00000008634) ##22	ENSOJAG00000008620 ##22	ENSOJAG00000008599 ##22	PABPN1L (ENSOJAG00000008590)	trappc2l (ENSOJAG00000008496)	galns (ENSOJAG00000008107)	cmtm3 (ENSOJAG00000008080)	cmtm4 (ENSOJAG00000008072)	dync1li2 (ENSOJAG00000007971)	ENSOJAG00000007937	nae1 (ENSOJAG00000007695)	ca7 (ENSOJAG00000007673)	ENSOJAG00000007661	rrad (ENSOJAG00000007637)	ENSOJAG00000007568	nsun3 (ENSOJAG00000007547)
Indian medaka	MODERN SPECIES	26	lin7c (ENSOMEG00000018588)	FTH1 (ENSOMEG00000018537)	mcee (ENSOMEG00000018524)	mphosph10 (ENSOMEG00000018510)	ist1 (ENSOMEG00000018483)	dhodh (ENSOMEG00000018454)	ENSOMEG00000018429	ENSOMEG00000000473	sult5a1 (ENSOMEG00000018398)	dpep1 (ENSOMEG00000018387)	SLC22A31 (ENSOMEG00000018341)	ANKRD11 (ENSOMEG00000018271)	SPG7 (ENSOMEG00000018173)	cdh15 (ENSOMEG00000018091)	ACSF3 (ENSOMEG00000018056)	CBFA2T3 (ENSOMEG00000018005) ##22	PABPN1L (ENSOMEG00000017896)	trappc2l (ENSOMEG00000017913)	galns (ENSOMEG00000000443)	cmtm3 (ENSOMEG00000017804)	cmtm4 (ENSOMEG00000017786)	dync1li2 (ENSOMEG00000017743)	ENSOMEG00000017655	nae1 (ENSOMEG00000017622)	ca7 (ENSOMEG00000017550)	ENSOMEG00000017520	rrad (ENSOMEG00000000437)	ENSOMEG00000017448	nsun3 (ENSOMEG00000017419)	ENSOMEG00000017336	arl6 (ENSOMEG00000017204)
Cyprinodontiformes	ANCESTRAL SPECIES	9	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000159903	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Cyprinodontoidei	ANCESTRAL SPECIES	6	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000159903	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Poeciliinae	ANCESTRAL SPECIES	13	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000159903	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Poecilia	ANCESTRAL SPECIES	4	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000161671.r	ENSGT00940000162823.C.b	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
NAME_6	ANCESTRAL SPECIES	5	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Amazon molly	MODERN SPECIES	311	FTH1 (ENSPFOG00000004723)	mcee (ENSPFOG00000004772)	mphosph10 (ENSPFOG00000004797)	ist1 (ENSPFOG00000004923)	ENSPFOG00000005021	dhodh (ENSPFOG00000022185)	ENSPFOG00000005174	ENSPFOG00000005078	sult5a1 (ENSPFOG00000005192)	dpep1 (ENSPFOG00000005345)	SLC22A31 (ENSPFOG00000005543)	ANKRD11 (ENSPFOG00000005711)	SPG7 (ENSPFOG00000005775)	cdh15 (ENSPFOG00000006193)	ACSF3 (ENSPFOG00000006548)	CBFA2T3 (ENSPFOG00000006740) ##22	PABPN1L (ENSPFOG00000007001)	trappc2l (ENSPFOG00000007023)	galns (ENSPFOG00000007037)	trappc2l (ENSPFOG00000007027)	CKLF (ENSPFOG00000007338)	cmtm3 (ENSPFOG00000007343)	cmtm4 (ENSPFOG00000007412)	dync1li2 (ENSPFOG00000007447)	ENSPFOG00000020732	nae1 (ENSPFOG00000007599)	ca7 (ENSPFOG00000007781)	ENSPFOG00000007824	rrad (ENSPFOG00000022829)	atp5mc3b (ENSPFOG00000008094)	nsun3 (ENSPFOG00000008121)
Sailfin molly	MODERN SPECIES	176							ENSPLAG00000018801	ENSPLAG00000018792	sult5a1 (ENSPLAG00000018779)	dpep1 (ENSPLAG00000018733)	SLC22A31 (ENSPLAG00000018707)	ANKRD11 (ENSPLAG00000018683)	SPG7 (ENSPLAG00000018570)	cdh15 (ENSPLAG00000018557)	ACSF3 (ENSPLAG00000018486)	CBFA2T3 (ENSPLAG00000018464) ##22	PABPN1L (ENSPLAG00000018431)	trappc2l (ENSPLAG00000018423)	galns (ENSPLAG00000018395)
Guppy	MODERN SPECIES	455	FTH1 (ENSPREG00000022661)	mcee (ENSPREG00000022660)	mphosph10 (ENSPREG00000022655)	ist1 (ENSPREG00000022649)	dhodh (ENSPREG00000022646)	ENSPREG00000022640	ENSPREG00000022636	sult5a1 (ENSPREG00000022629)	dpep1 (ENSPREG00000022621)	SLC22A31 (ENSPREG00000022615)	ANKRD11 (ENSPREG00000022606)	SPG7 (ENSPREG00000022595)	cdh15 (ENSPREG00000022584)	ACSF3 (ENSPREG00000022574)	ENSPREG00000022568	CBFA2T3 (ENSPREG00000022552) ##22	PABPN1L (ENSPREG00000022533)	trappc2l (ENSPREG00000022530)	galns (ENSPREG00000022524)	CKLF (ENSPREG00000022521)	cmtm3 (ENSPREG00000022513)	cmtm4 (ENSPREG00000022507)	dync1li2 (ENSPREG00000022496)	ENSPREG00000022489	nae1 (ENSPREG00000022472)	ca7 (ENSPREG00000022462)	ENSPREG00000022450	rrad (ENSPREG00000022441)	ENSPREG00000022438	fah (ENSPREG00000022425)	arnt2 (ENSPREG00000022410)
Platyfish	MODERN SPECIES	18	FTH1 (ENSXMAG00000018294)	mcee (ENSXMAG00000018295)	mphosph10 (ENSXMAG00000018298)	ist1 (ENSXMAG00000018307)	dhodh (ENSXMAG00000018327)	ENSXMAG00000026900	ENSXMAG00000024388	sult5a1 (ENSXMAG00000018343)	ENSXMAG00000025481	dpep1 (ENSXMAG00000018359)	SLC22A31 (ENSXMAG00000024946)	ANKRD11 (ENSXMAG00000028237)	SPG7 (ENSXMAG00000018392)	cdh15 (ENSXMAG00000018416)	ACSF3 (ENSXMAG00000011373)	CBFA2T3 (ENSXMAG00000023420) ##22	trappc2l (ENSXMAG00000018878)	PABPN1L (ENSXMAG00000029090)	galns (ENSXMAG00000018880)	CKLF (ENSXMAG00000018918)	cmtm3 (ENSXMAG00000028142)	cmtm4 (ENSXMAG00000018940)	dync1li2 (ENSXMAG00000018946)	ENSXMAG00000019438	nae1 (ENSXMAG00000018987)	ca7 (ENSXMAG00000019026)	ENSXMAG00000019040	rrad (ENSXMAG00000019054)	atp5mc3b (ENSXMAG00000019062)	nsun3 (ENSXMAG00000019063)	ENSXMAG00000019066
NAME_4	DUPLICATION
NAME_4	ANCESTRAL SPECIES																	ENSGT00950000183176.b.e.`b ##22
Mummichog	MODERN SPECIES	2253	ENSFHEG00000013536	ankib1a (ENSFHEG00000013602)	snrpd1 (ENSFHEG00000000642)	ggcta (ENSFHEG00000013631)	adnp2b (ENSFHEG00000013651)	azin1b (ENSFHEG00000013661)	ATP6V1C1 (ENSFHEG00000013699)	ENSFHEG00000013717	spire1a (ENSFHEG00000013757)	klhl38a (ENSFHEG00000013770)	fam91a1 (ENSFHEG00000013823)	lratd2a (ENSFHEG00000013840)	TRIB1 (ENSFHEG00000013845)	cibar1 (ENSFHEG00000013881) #19	triqk (ENSFHEG00000013899) #21	ENSFHEG00000013908 ##22	runx1t1 (ENSFHEG00000013941) #22	ENSFHEG00000013950	ENSFHEG00000013970	otud6b (ENSFHEG00000014034) #25	ENSFHEG00000014070	kat2b (ENSFHEG00000014137)	ENSFHEG00000014149	ENSFHEG00000014162	rab25a (ENSFHEG00000014186)	UBQLN4 (ENSFHEG00000014233)	LIM2 (ENSFHEG00000014247)	TINAGL1 (ENSFHEG00000014281)	cfap300 (ENSFHEG00000014297)	KCNQ4 (ENSFHEG00000000825)	nfyc (ENSFHEG00000014493)
NAME_4	ANCESTRAL SPECIES	6	ENSGT00940000153222.a.b.b.b.a	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00500000044924	ENSGT00940000162823.C.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e.ab ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b.f
Mummichog	MODERN SPECIES	406	FTH1 (ENSFHEG00000018910)	mcee (ENSFHEG00000018871)	mphosph10 (ENSFHEG00000018862)	ist1 (ENSFHEG00000018849)	dhodh (ENSFHEG00000000486)	ENSFHEG00000018801	ENSFHEG00000018789	sult5a1 (ENSFHEG00000018766)	dpep1 (ENSFHEG00000018669)	SLC22A31 (ENSFHEG00000018663)	ENSFHEG00000018652	ANKRD11 (ENSFHEG00000018639)	SPG7 (ENSFHEG00000018540)	cdh15 (ENSFHEG00000018473)	ACSF3 (ENSFHEG00000018453)	CBFA2T3 (ENSFHEG00000018396) ##22	PABPN1L (ENSFHEG00000018295)	trappc2l (ENSFHEG00000018288)	galns (ENSFHEG00000018277)	ENSFHEG00000018219	cmtm3 (ENSFHEG00000018201)	cmtm4 (ENSFHEG00000018174)	dync1li2 (ENSFHEG00000018146)	ENSFHEG00000018136	nae1 (ENSFHEG00000018120)	ca7 (ENSFHEG00000018045)	ENSFHEG00000018001	rrad (ENSFHEG00000017963)	atp5mc3b (ENSFHEG00000017955)	nsun3 (ENSFHEG00000017948)	ENSFHEG00000017938
Sheepshead minnow	MODERN SPECIES	127	rplp2l (ENSCVAG00000015941)	FTH1 (ENSCVAG00000015937)	mcee (ENSCVAG00000015918)	mphosph10 (ENSCVAG00000015908)	ist1 (ENSCVAG00000015900)	dhodh (ENSCVAG00000015885)	ENSCVAG00000015854	ENSCVAG00000015841	sult5a1 (ENSCVAG00000015832)	dpep1 (ENSCVAG00000015779)	SLC22A31 (ENSCVAG00000015768)	ANKRD11 (ENSCVAG00000015748)	SPG7 (ENSCVAG00000015715)	cdh15 (ENSCVAG00000015649)	ACSF3 (ENSCVAG00000015636)	CBFA2T3 (ENSCVAG00000015609) ##22	ENSCVAG00000015556	PABPN1L (ENSCVAG00000015547)	trappc2l (ENSCVAG00000015525)	galns (ENSCVAG00000015498)	ENSCVAG00000015465	cmtm3 (ENSCVAG00000015455)	cmtm4 (ENSCVAG00000015449)	dync1li2 (ENSCVAG00000015412)	ENSCVAG00000015375	nae1 (ENSCVAG00000015367)	ca7 (ENSCVAG00000015284)	ENSCVAG00000015278	rrad (ENSCVAG00000015249)	atp5mc3b (ENSCVAG00000015246)	nsun3 (ENSCVAG00000015238)
Aplocheiloidei	ANCESTRAL SPECIES	16	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.b.a	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00500000044924	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Mangrove rivulus	MODERN SPECIES	5	FTH1 (ENSKMAG00000001739)	mcee (ENSKMAG00000001721)	mphosph10 (ENSKMAG00000001701)	ist1 (ENSKMAG00000001682)	dhodh (ENSKMAG00000001640)	ENSKMAG00000001620	ENSKMAG00000001596	sult5a1 (ENSKMAG00000001555)	dpep1 (ENSKMAG00000001511)	SLC22A31 (ENSKMAG00000001468)	ANKRD11 (ENSKMAG00000001439)	SPG7 (ENSKMAG00000001368)	cdh15 (ENSKMAG00000001339)	ACSF3 (ENSKMAG00000001289)	ENSKMAG00000001263	CBFA2T3 (ENSKMAG00000001167) ##22	PABPN1L (ENSKMAG00000001112)	trappc2l (ENSKMAG00000001093)	galns (ENSKMAG00000001019)	CKLF (ENSKMAG00000000996)	cmtm3 (ENSKMAG00000000983)	cmtm4 (ENSKMAG00000000962)	dync1li2 (ENSKMAG00000000897)	ENSKMAG00000000869	nae1 (ENSKMAG00000000760)	ca7 (ENSKMAG00000000731)	ENSKMAG00000000654	rrad (ENSKMAG00000000643)	atp5mc3b (ENSKMAG00000000635)	nsun3 (ENSKMAG00000000628)	EPHA6 (ENSKMAG00000000415)
Turquoise killifish	DUPLICATION
Turquoise killifish	DUPLICATION
Turquoise killifish	DUPLICATION
Turquoise killifish	MODERN SPECIES	1616	URB2 (ENSNFUG00015006908)	galnt2 (ENSNFUG00015006153)	SMYD2A (ENSNFUG00015005985)	CENPF (ENSNFUG00015005957)	KCNK2 (ENSNFUG00015005948)	CGREF1 (ENSNFUG00015005939)	ENSNFUG00015005936	efcab2 (ENSNFUG00015005932)	ADPGK2 (ENSNFUG00015005922)	CTSBA (ENSNFUG00015005914)	PSMC3 (ENSNFUG00015005911)	TBP (ENSNFUG00015005903)	ENSNFUG00015005896	ACSF3 (ENSNFUG00015005889)	ENSNFUG00015005882	ENSNFUG00015005876 ##22	ENSNFUG00015005873 ##22	ENSNFUG00015005868 ##22	PABPN1L (ENSNFUG00015005864)	TRAPPC2L (ENSNFUG00015005855)	galns (ENSNFUG00015011547)	ENSNFUG00015011525	ENSNFUG00015011502 ##22	CMTM4 (ENSNFUG00015011495)	dync1li2 (ENSNFUG00015010127)	ca7 (ENSNFUG00015009643)	ENSNFUG00015009626	RRAD (ENSNFUG00015009607)	ATP5G3B (ENSNFUG00015009524)	NSUN3 (ENSNFUG00015009509)	ENSNFUG00015009418
Turquoise killifish	MODERN SPECIES	1616	SMYD2A (ENSNFUG00015005985)	CENPF (ENSNFUG00015005957)	KCNK2 (ENSNFUG00015005948)	CGREF1 (ENSNFUG00015005939)	ENSNFUG00015005936	efcab2 (ENSNFUG00015005932)	ADPGK2 (ENSNFUG00015005922)	CTSBA (ENSNFUG00015005914)	PSMC3 (ENSNFUG00015005911)	TBP (ENSNFUG00015005903)	ENSNFUG00015005896	ACSF3 (ENSNFUG00015005889)	ENSNFUG00015005882	ENSNFUG00015005876 ##22	ENSNFUG00015005873 ##22	ENSNFUG00015005868 ##22	PABPN1L (ENSNFUG00015005864)	TRAPPC2L (ENSNFUG00015005855)	galns (ENSNFUG00015011547)	ENSNFUG00015011525	ENSNFUG00015011502 ##22	CMTM4 (ENSNFUG00015011495)	dync1li2 (ENSNFUG00015010127)	ca7 (ENSNFUG00015009643)	ENSNFUG00015009626	RRAD (ENSNFUG00015009607)	ATP5G3B (ENSNFUG00015009524)	NSUN3 (ENSNFUG00015009509)	ENSNFUG00015009418	ARL6 (ENSNFUG00015009374)	SLC5A7 (ENSNFUG00015009350)
Turquoise killifish	MODERN SPECIES	1616	galnt2 (ENSNFUG00015006153)	SMYD2A (ENSNFUG00015005985)	CENPF (ENSNFUG00015005957)	KCNK2 (ENSNFUG00015005948)	CGREF1 (ENSNFUG00015005939)	ENSNFUG00015005936	efcab2 (ENSNFUG00015005932)	ADPGK2 (ENSNFUG00015005922)	CTSBA (ENSNFUG00015005914)	PSMC3 (ENSNFUG00015005911)	TBP (ENSNFUG00015005903)	ENSNFUG00015005896	ACSF3 (ENSNFUG00015005889)	ENSNFUG00015005882	ENSNFUG00015005876 ##22	ENSNFUG00015005873 ##22	ENSNFUG00015005868 ##22	PABPN1L (ENSNFUG00015005864)	TRAPPC2L (ENSNFUG00015005855)	galns (ENSNFUG00015011547)	ENSNFUG00015011525	ENSNFUG00015011502 ##22	CMTM4 (ENSNFUG00015011495)	dync1li2 (ENSNFUG00015010127)	ca7 (ENSNFUG00015009643)	ENSNFUG00015009626	RRAD (ENSNFUG00015009607)	ATP5G3B (ENSNFUG00015009524)	NSUN3 (ENSNFUG00015009509)	ENSNFUG00015009418	ARL6 (ENSNFUG00015009374)
Turquoise killifish	MODERN SPECIES	1616	efcab2 (ENSNFUG00015005932)	ADPGK2 (ENSNFUG00015005922)	CTSBA (ENSNFUG00015005914)	PSMC3 (ENSNFUG00015005911)	TBP (ENSNFUG00015005903)	ENSNFUG00015005896	ACSF3 (ENSNFUG00015005889)	ENSNFUG00015005882	ENSNFUG00015005876 ##22	ENSNFUG00015005873 ##22	ENSNFUG00015005868 ##22	PABPN1L (ENSNFUG00015005864)	TRAPPC2L (ENSNFUG00015005855)	galns (ENSNFUG00015011547)	ENSNFUG00015011525	ENSNFUG00015011502 ##22	CMTM4 (ENSNFUG00015011495)	dync1li2 (ENSNFUG00015010127)	ca7 (ENSNFUG00015009643)	ENSNFUG00015009626	RRAD (ENSNFUG00015009607)	ATP5G3B (ENSNFUG00015009524)	NSUN3 (ENSNFUG00015009509)	ENSNFUG00015009418	ARL6 (ENSNFUG00015009374)	SLC5A7 (ENSNFUG00015009350)	kctd12.2 (ENSNFUG00015009322)	lmo7b (ENSNFUG00015009250)	ENSNFUG00015009219	ENSNFUG00015009209	gpc6a (ENSNFUG00015009118)
Ovalentaria_B	ANCESTRAL SPECIES	10	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000178658	ENSGT00500000044924	ENSGT00940000161671	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Pomacentridae	ANCESTRAL SPECIES	15	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000178658	ENSGT00500000044924	ENSGT00940000161671	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Pomacentridae_A	ANCESTRAL SPECIES	28	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000178658	ENSGT00500000044924	ENSGT00940000161671	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325.q	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Amphiprion	ANCESTRAL SPECIES	37	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000178658	ENSGT00500000044924	ENSGT00940000161671	ENSGT00940000159903	ENSGT00940000163403	ENSGT00940000159615.g	ENSGT00940000159615.h	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325.q	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Orange clownfish	MODERN SPECIES		mcee (ENSAPEG00000018891)	mphosph10 (ENSAPEG00000018904)	ist1 (ENSAPEG00000018915)	ENSAPEG00000018927	dhodh (ENSAPEG00000018948)	ENSAPEG00000018978	ENSAPEG00000018990	sult5a1 (ENSAPEG00000018997)	dpep1 (ENSAPEG00000019060)	dpep1 (ENSAPEG00000019168)	SLC22A31 (ENSAPEG00000019239)	ENSAPEG00000019272	SPG7 (ENSAPEG00000019317)	cdh15 (ENSAPEG00000019385)	ACSF3 (ENSAPEG00000019449)	CBFA2T3 (ENSAPEG00000019481) ##22	PABPN1L (ENSAPEG00000019534)	trappc2l (ENSAPEG00000019545)	galns (ENSAPEG00000019580)	ENSAPEG00000019640	cmtm3 (ENSAPEG00000019647)	cmtm4 (ENSAPEG00000019665)	dync1li2 (ENSAPEG00000019697)	ENSAPEG00000019776	nae1 (ENSAPEG00000019817)	ca7 (ENSAPEG00000019889)	ENSAPEG00000019928	rrad (ENSAPEG00000019974)	atp5mc3b (ENSAPEG00000019985)	nsun3 (ENSAPEG00000019993)	EPHA6 (ENSAPEG00000020002)
Clown anemonefish	MODERN SPECIES	3342										SLC22A31 (ENSAOCG00000001498)	ANKRD11 (ENSAOCG00000020206)	SPG7 (ENSAOCG00000020178)	cdh15 (ENSAOCG00000020123)	ACSF3 (ENSAOCG00000020028)	ENSAOCG00000019980	CBFA2T3 (ENSAOCG00000019949) ##22	PABPN1L (ENSAOCG00000019844)	trappc2l (ENSAOCG00000002319)	galns (ENSAOCG00000001453)
Spiny chromis	MODERN SPECIES	17	FTH1 (ENSAPOG00000001980)	mcee (ENSAPOG00000001960)	mphosph10 (ENSAPOG00000001943)	ist1 (ENSAPOG00000001934)	dhodh (ENSAPOG00000001926)	ENSAPOG00000001903	ENSAPOG00000001898	sult5a1 (ENSAPOG00000000035)	dpep1 (ENSAPOG00000001873)	dpep1 (ENSAPOG00000001788)	SLC22A31 (ENSAPOG00000001137)	ANKRD11 (ENSAPOG00000001757)	SPG7 (ENSAPOG00000001741)	cdh15 (ENSAPOG00000000026)	ACSF3 (ENSAPOG00000001702)	CBFA2T3 (ENSAPOG00000001647) ##22	PABPN1L (ENSAPOG00000000685)	trappc2l (ENSAPOG00000024565)	galns (ENSAPOG00000024562)	ENSAPOG00000024558	cmtm3 (ENSAPOG00000024557)	cmtm4 (ENSAPOG00000024556)	dync1li2 (ENSAPOG00000024554)	ENSAPOG00000024551	nae1 (ENSAPOG00000024547)	ca7 (ENSAPOG00000024539)	ENSAPOG00000024536	rrad (ENSAPOG00000024533)	atp5mc3b (ENSAPOG00000024531)	nsun3 (ENSAPOG00000024527)	EPHA6 (ENSAPOG00000024523)
Bicolor damselfish	MODERN SPECIES	255									ENSSPAG00000018268	SLC22A31 (ENSSPAG00000018247)	ANKRD11 (ENSSPAG00000018223)	SPG7 (ENSSPAG00000018153)	cdh15 (ENSSPAG00000018115)	ENSSPAG00000018102	ACSF3 (ENSSPAG00000018036)	CBFA2T3 (ENSSPAG00000018008) ##22	PABPN1L (ENSSPAG00000017978)	trappc2l (ENSSPAG00000017985)	galns (ENSSPAG00000017917)	ENSSPAG00000017883	cmtm3 (ENSSPAG00000017867)	cmtm4 (ENSSPAG00000017848)	dync1li2 (ENSSPAG00000017784)	ENSSPAG00000017769	nae1 (ENSSPAG00000017682)	ca7 (ENSSPAG00000017659)	ENSSPAG00000017626	rrad (ENSSPAG00000017609)	atp5mc3b (ENSSPAG00000017597)	nsun3 (ENSSPAG00000017584)	EPHA6 (ENSSPAG00000017551)
Cichlidae	ANCESTRAL SPECIES	11	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000178658	ENSGT00500000044924	ENSGT00940000161671	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	13	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000161671	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	13	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000161671	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Haplochromini	ANCESTRAL SPECIES	11	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000161671	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Haplochromini_A	ANCESTRAL SPECIES	10	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000161671	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Haplochromini_B	ANCESTRAL SPECIES	3	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00500000044924	ENSGT00940000161671	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Zebra mbuna	MODERN SPECIES	1091	eif3jb (ENSMZEG00005001694)	ENSMZEG00005001705	CTDSPL2 (ENSMZEG00005001788)	GOLM2 (ENSMZEG00005001863)	ENTREP2 (ENSMZEG00005001915)	dhodh (ENSMZEG00005001968)	ENSMZEG00005001986	ENSMZEG00005001996	sult5a1 (ENSMZEG00005002012)	dpep1 (ENSMZEG00005002035)	SLC22A31 (ENSMZEG00005002068)	ANKRD11 (ENSMZEG00005002091)	SPG7 (ENSMZEG00005002109)	cdh15 (ENSMZEG00005002124)	ACSF3 (ENSMZEG00005002136)	CBFA2T3 (ENSMZEG00005002167) ##22	trappc2l (ENSMZEG00005002196)	PABPN1L (ENSMZEG00005002186)	galns (ENSMZEG00005002219)	ENSMZEG00005002253	cmtm3 (ENSMZEG00005002262)	cmtm4 (ENSMZEG00005002282)	dync1li2 (ENSMZEG00005002305)	ENSMZEG00005002343	nae1 (ENSMZEG00005002359)	ca7 (ENSMZEG00005002424)	ENSMZEG00005002438	rrad (ENSMZEG00005002463)	atp5mc3b (ENSMZEG00005002472)	nsun3 (ENSMZEG00005002485)	ENSMZEG00005002501
Eastern happy	MODERN SPECIES		FTH1 (ENSACLG00000025477)	mcee (ENSACLG00000025469)	ENSACLG00000025466	mphosph10 (ENSACLG00000025421)	ist1 (ENSACLG00000025412)	dhodh (ENSACLG00000025370)	ENSACLG00000025365	ENSACLG00000025361	sult5a1 (ENSACLG00000025344)	dpep1 (ENSACLG00000025318)	SLC22A31 (ENSACLG00000025305)	ANKRD11 (ENSACLG00000025291)	SPG7 (ENSACLG00000025266)	cdh15 (ENSACLG00000025259)	ACSF3 (ENSACLG00000025236)	CBFA2T3 (ENSACLG00000025182) ##22	PABPN1L (ENSACLG00000025147)	trappc2l (ENSACLG00000025161)	galns (ENSACLG00000025082)	ENSACLG00000025069	cmtm3 (ENSACLG00000025061)	cmtm4 (ENSACLG00000025042)	dync1li2 (ENSACLG00000025010)	ENSACLG00000025009	ENSACLG00000025003	nae1 (ENSACLG00000024866)	ca7 (ENSACLG00000024851)	ENSACLG00000024827	rrad (ENSACLG00000024817)	atp5mc3b (ENSACLG00000024814)	nsun3 (ENSACLG00000024811)
P. nyererei	MODERN SPECIES	306	ENSPNYG00000005327	mcee (ENSPNYG00000005314)	mphosph10 (ENSPNYG00000005297)	ist1 (ENSPNYG00000005281)	ENSPNYG00000005267	dhodh (ENSPNYG00000005213)	ENSPNYG00000005189	ENSPNYG00000005163	sult5a1 (ENSPNYG00000005121)	dpep1 (ENSPNYG00000005081)	SLC22A31 (ENSPNYG00000005055)	ANKRD11 (ENSPNYG00000004964)	SPG7 (ENSPNYG00000004917)	cdh15 (ENSPNYG00000004879)	ACSF3 (ENSPNYG00000004861)	CBFA2T3 (ENSPNYG00000004817) ##22	trappc2l (ENSPNYG00000004773)	PABPN1L (ENSPNYG00000004803)	galns (ENSPNYG00000004704)	ENSPNYG00000004687	cmtm3 (ENSPNYG00000004671)	cmtm4 (ENSPNYG00000004650)	dync1li2 (ENSPNYG00000004610)	ENSPNYG00000004595	nae1 (ENSPNYG00000004535)	ca7 (ENSPNYG00000004450)	ENSPNYG00000004404	rrad (ENSPNYG00000004330)	atp5mc3b (ENSPNYG00000004284)	nsun3 (ENSPNYG00000004222)	EPHA6 (ENSPNYG00000004087)
Burton s mouthbrooder	MODERN SPECIES	489	rplp2l (ENSHBUG00000023361)	FTH1 (ENSHBUG00000023392)	mcee (ENSHBUG00000023414)	mphosph10 (ENSHBUG00000023423)	ist1 (ENSHBUG00000023437)	dhodh (ENSHBUG00000023529)	ENSHBUG00000023552	ENSHBUG00000023571	sult5a1 (ENSHBUG00000023578)	dpep1 (ENSHBUG00000023631)	SLC22A31 (ENSHBUG00000023639)	ANKRD11 (ENSHBUG00000023663)	SPG7 (ENSHBUG00000023770)	cdh15 (ENSHBUG00000000038)	ACSF3 (ENSHBUG00000002356)	CBFA2T3 (ENSHBUG00000002372) ##22	PABPN1L (ENSHBUG00000002388)	trappc2l (ENSHBUG00000002405)	galns (ENSHBUG00000002433)	cmtm3 (ENSHBUG00000002461)	cmtm4 (ENSHBUG00000002474)	dync1li2 (ENSHBUG00000002506)	ENSHBUG00000002519	nae1 (ENSHBUG00000002555)	ca7 (ENSHBUG00000002570)	ENSHBUG00000002591	rrad (ENSHBUG00000002603)	atp5mc3b (ENSHBUG00000002614)	nsun3 (ENSHBUG00000002623)	ENSHBUG00000002671	arl6 (ENSHBUG00000002695)
Lyretail cichlid	MODERN SPECIES	290	rplp2l (ENSNBRG00000016643)	FTH1 (ENSNBRG00000016661)	mcee (ENSNBRG00000016683)	mphosph10 (ENSNBRG00000016697)	ist1 (ENSNBRG00000016754)	dhodh (ENSNBRG00000016777)	ENSNBRG00000016791	ENSNBRG00000016811	sult5a1 (ENSNBRG00000016836)	dpep1 (ENSNBRG00000016859)	SLC22A31 (ENSNBRG00000016887)	ANKRD11 (ENSNBRG00000016919)	SPG7 (ENSNBRG00000016943)	cdh15 (ENSNBRG00000016991)	ACSF3 (ENSNBRG00000017023)	CBFA2T3 (ENSNBRG00000017056) ##22	PABPN1L (ENSNBRG00000017078)	trappc2l (ENSNBRG00000017092)	galns (ENSNBRG00000017114)	ENSNBRG00000017145	cmtm3 (ENSNBRG00000017166)	cmtm4 (ENSNBRG00000017244)	dync1li2 (ENSNBRG00000017264)	ENSNBRG00000017308	nae1 (ENSNBRG00000017327)	ca7 (ENSNBRG00000017367)	ENSNBRG00000017429	rrad (ENSNBRG00000017464)	atp5mc3b (ENSNBRG00000017516)	nsun3 (ENSNBRG00000017526)	EPHA6 (ENSNBRG00000017542)
Nile tilapia	MODERN SPECIES		rplp2l (ENSONIG00000032714)	FTH1 (ENSONIG00000033676)	mcee (ENSONIG00000002996)	mphosph10 (ENSONIG00000002999)	ist1 (ENSONIG00000040532)	dhodh (ENSONIG00000003006)	ENSONIG00000039066	sult5a1 (ENSONIG00000003011)	dpep1 (ENSONIG00000003012)	SLC22A31 (ENSONIG00000003017)	ANKRD11 (ENSONIG00000003018)	SPG7 (ENSONIG00000003023)	cdh15 (ENSONIG00000003028)	ACSF3 (ENSONIG00000003039)	ENSONIG00000031420	CBFA2T3 (ENSONIG00000003046) ##22	PABPN1L (ENSONIG00000032747)	trappc2l (ENSONIG00000038244)	galns (ENSONIG00000003051)	ENSONIG00000036785	cmtm3 (ENSONIG00000036717)	cmtm4 (ENSONIG00000024902)	dync1li2 (ENSONIG00000003060)	ENSONIG00000020615	nae1 (ENSONIG00000003065)	ca7 (ENSONIG00000003072)	ENSONIG00000003074	rrad (ENSONIG00000003082)	atp5mc3b (ENSONIG00000003083)	nsun3 (ENSONIG00000034384)	ENSONIG00000003089
Midas cichlid	MODERN SPECIES	533											SLC22A31 (ENSACIG00000020866)	ANKRD11 (ENSACIG00000020882)	SPG7 (ENSACIG00000020992)	cdh15 (ENSACIG00000021075)	ACSF3 (ENSACIG00000021118)	CBFA2T3 (ENSACIG00000021156) ##22	PABPN1L (ENSACIG00000021400)	trappc2l (ENSACIG00000021426)	galns (ENSACIG00000021440)	CKLF (ENSACIG00000021471)	cmtm3 (ENSACIG00000021490)	cmtm4 (ENSACIG00000021535)	dync1li2 (ENSACIG00000021557)	ENSACIG00000021584	nae1 (ENSACIG00000021594)	ca7 (ENSACIG00000021634)	ENSACIG00000021709	rrad (ENSACIG00000021746)	ATP5MC1 (ENSACIG00000021768)	nsun3 (ENSACIG00000021929)	ENSACIG00000021987
Percomorphaceae_C	ANCESTRAL SPECIES	11	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000178658	ENSGT00500000044924	ENSGT00940000159903	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Eupercaria	ANCESTRAL SPECIES	14	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000178658	ENSGT00500000044924	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Tetraodontidae	ANCESTRAL SPECIES	4	ENSGT00390000007725.B.d	ENSGT00940000153222.a.b.b.b.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00500000044924	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000162670	ENSGT00940000155966.eb	ENSGT00940000159615	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000175054	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b	ENSGT00940000156459.k
Fugu	MODERN SPECIES	4	lin7c (ENSTRUG00000017267)	FTH1 (ENSTRUG00000030687)	mcee (ENSTRUG00000033128)	mphosph10 (ENSTRUG00000017264)	ist1 (ENSTRUG00000022449)	dhodh (ENSTRUG00000017261)	ENSTRUG00000017260	sult5a1 (ENSTRUG00000017259)	SLC22A31 (ENSTRUG00000017257)	ENSTRUG00000032705	dpep1 (ENSTRUG00000017258)	ANKRD11 (ENSTRUG00000025155)	SPG7 (ENSTRUG00000017255)	cdh15 (ENSTRUG00000017254)	ACSF3 (ENSTRUG00000017253)	CBFA2T3 (ENSTRUG00000017252) ##22	PABPN1L (ENSTRUG00000030338)	trappc2l (ENSTRUG00000017250)	galns (ENSTRUG00000017249)	ENSTRUG00000020774	cmtm3 (ENSTRUG00000017248)	cmtm4 (ENSTRUG00000031238)	dync1li2 (ENSTRUG00000017246)	nae1 (ENSTRUG00000017245)	ca7 (ENSTRUG00000017244)	ENSTRUG00000017243	rrad (ENSTRUG00000017242)	atp5mc3b (ENSTRUG00000021379)	nsun3 (ENSTRUG00000019509)	EPHA6 (ENSTRUG00000017240)	arl6 (ENSTRUG00000017239)
Tetraodon	MODERN SPECIES	20	eif3jb (ENSTNIG00000009400)	cilp (ENSTNIG00000009401)	IGDCC3 (ENSTNIG00000009402)	ano5b (ENSTNIG00000009403)	slc17a6b (ENSTNIG00000009404)	GAS2 (ENSTNIG00000009405)	slc39a13 (ENSTNIG00000009406)	spi1b (ENSTNIG00000009407)	mybpc3 (ENSTNIG00000009408)	lgr4 (ENSTNIG00000009409)	mettl15 (ENSTNIG00000009410)	ENSTNIG00000009411	SPG7 (ENSTNIG00000009412)	cdh15 (ENSTNIG00000009413)	ACSF3 (ENSTNIG00000009414)	CBFA2T3 (ENSTNIG00000009415) ##22	PABPN1L (ENSTNIG00000009416)	trappc2l (ENSTNIG00000009417)	galns (ENSTNIG00000009418)	cmtm3 (ENSTNIG00000009419)	cmtm4 (ENSTNIG00000009420)	dync1li2 (ENSTNIG00000009421)	ENSTNIG00000009422	nae1 (ENSTNIG00000009423)	ca7 (ENSTNIG00000009424)	ENSTNIG00000009425	rrad (ENSTNIG00000009426)	atp5mc3b (ENSTNIG00000009427)	nsun3 (ENSTNIG00000009428)	ENSTNIG00000009429	arl6 (ENSTNIG00000009430)
Eupecaria_A	ANCESTRAL SPECIES	15	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000178658	ENSGT00500000044924	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Ballan wrasse	MODERN SPECIES	462																CBFA2T3 (ENSLBEG00000011666) ##22	trappc2l (ENSLBEG00000011621)	PABPN1L (ENSLBEG00000011647)	galns (ENSLBEG00000011579)	CKLF (ENSLBEG00000011555)	cmtm3 (ENSLBEG00000011528)	cmtm4 (ENSLBEG00000011506)	dync1li2 (ENSLBEG00000011486)	ENSLBEG00000011466	nae1 (ENSLBEG00000011347)	ca7 (ENSLBEG00000011260)	ENSLBEG00000011196	rrad (ENSLBEG00000011162)	atp5mc3b (ENSLBEG00000011134)	nsun3 (ENSLBEG00000011096)	ENSLBEG00000011062
Eupecaria_B	ANCESTRAL SPECIES	15	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000178658	ENSGT00500000044924	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Perciformes	ANCESTRAL SPECIES	15	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000178658	ENSGT00500000044924	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Perciformes_a	ANCESTRAL SPECIES	13	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000178658	ENSGT00500000044924	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Pike perch	MODERN SPECIES	44	rplp2l (ENSSLUG00000008127)	FTH1 (ENSSLUG00000008122)	mcee (ENSSLUG00000008116)	mphosph10 (ENSSLUG00000007775)	ist1 (ENSSLUG00000007721)	ENSSLUG00000007710	dhodh (ENSSLUG00000007690)	ENSSLUG00000007681	sult5a1 (ENSSLUG00000007678)	dpep1 (ENSSLUG00000007645)	SLC22A31 (ENSSLUG00000007628)	ANKRD11 (ENSSLUG00000007520)	SPG7 (ENSSLUG00000006937)	cdh15 (ENSSLUG00000006861)	ACSF3 (ENSSLUG00000006846)	CBFA2T3 (ENSSLUG00000006715) ##22	PABPN1L (ENSSLUG00000006679)	trappc2l (ENSSLUG00000006637)	galns (ENSSLUG00000006586)	ENSSLUG00000006570	cmtm3 (ENSSLUG00000006576)	cmtm4 (ENSSLUG00000006566)	dync1li2 (ENSSLUG00000006538)	ENSSLUG00000006516	nae1 (ENSSLUG00000006431)	ca7 (ENSSLUG00000006405)	rrad (ENSSLUG00000006400)	ENSSLUG00000006384	nsun3 (ENSSLUG00000006264)	EPHA6 (ENSSLUG00000006222)	arl6 (ENSSLUG00000006214)
Channel bull blenny	MODERN SPECIES	17	ENSCGOG00000000498	mcee (ENSCGOG00000000460)	mphosph10 (ENSCGOG00000022206)	ist1 (ENSCGOG00000022195)	dhodh (ENSCGOG00000022193)	ENSCGOG00000022192	sult5a1 (ENSCGOG00000022191)	ENSCGOG00000022190	dpep1 (ENSCGOG00000022168)	SLC22A31 (ENSCGOG00000022167)	ANKRD11 (ENSCGOG00000022149)	ENSCGOG00000022142	SPG7 (ENSCGOG00000021725)	cdh15 (ENSCGOG00000021700)	ACSF3 (ENSCGOG00000021699)	CBFA2T3 (ENSCGOG00000021697) ##22	PABPN1L (ENSCGOG00000021695)	trappc2l (ENSCGOG00000021672)	galns (ENSCGOG00000021649)	CKLF (ENSCGOG00000021644)	cmtm3 (ENSCGOG00000021642)	cmtm4 (ENSCGOG00000021641)	dync1li2 (ENSCGOG00000021392)	ENSCGOG00000021386	nae1 (ENSCGOG00000020359)	ca7 (ENSCGOG00000020254)	ENSCGOG00000020250	rrad (ENSCGOG00000020245)	atp5mc3b (ENSCGOG00000020241)	nsun3 (ENSCGOG00000020236)	ENSCGOG00000020217
Cottioidei	ANCESTRAL SPECIES	13	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Lumpfish	MODERN SPECIES	18	rplp2l (ENSCLMG00005002101)	FTH1 (ENSCLMG00005002100)	mcee (ENSCLMG00005002097)	mphosph10 (ENSCLMG00005002069)	ist1 (ENSCLMG00005002061)	dhodh (ENSCLMG00005002053)	ENSCLMG00005002041	sult5a1 (ENSCLMG00005002019)	dpep1 (ENSCLMG00005002015)	SLC22A31 (ENSCLMG00005002014)	ENSCLMG00005002012	SPG7 (ENSCLMG00005000903)	cdh15 (ENSCLMG00005000890)	ACSF3 (ENSCLMG00005000886)	ENSCLMG00005000883	CBFA2T3 (ENSCLMG00005000791) ##22	PABPN1L (ENSCLMG00005000789)	trappc2l (ENSCLMG00005000781)	galns (ENSCLMG00005000729)	CKLF (ENSCLMG00005000725)	cmtm3 (ENSCLMG00005000724)	cmtm4 (ENSCLMG00005000723)	dync1li2 (ENSCLMG00005000715)	ENSCLMG00005000706	nae1 (ENSCLMG00005000674)	ca7 (ENSCLMG00005000592)	rrad (ENSCLMG00005000584)	ENSCLMG00005000550	nsun3 (ENSCLMG00005000546)	EPHA6 (ENSCLMG00005000538)	arl6 (ENSCLMG00005000532)
Stickleback	MODERN SPECIES	1	lin7c (ENSGACG00000015500)	rplp2l (ENSGACG00000015499)	FTH1 (ENSGACG00000015484)	mcee (ENSGACG00000015483)	mphosph10 (ENSGACG00000015478)	ist1 (ENSGACG00000015470)	ENSGACG00000015469	dhodh (ENSGACG00000015466)	sult5a1 (ENSGACG00000015459)	dpep1 (ENSGACG00000015454)	SLC22A31 (ENSGACG00000015452)	ANKRD11 (ENSGACG00000015450)	SPG7 (ENSGACG00000015447)	cdh15 (ENSGACG00000015445)	ACSF3 (ENSGACG00000015439)	CBFA2T3 (ENSGACG00000015432) ##22	PABPN1L (ENSGACG00000015428)	galns (ENSGACG00000015424)	ENSGACG00000015423	cmtm3 (ENSGACG00000015421)	cmtm4 (ENSGACG00000015419)	dync1li2 (ENSGACG00000015417)	ENSGACG00000015415	nae1 (ENSGACG00000015403)	ca7 (ENSGACG00000015396)	ENSGACG00000015392	rrad (ENSGACG00000015391)	atp5mc3b (ENSGACG00000015390)	nsun3 (ENSGACG00000015388)	EPHA6 (ENSGACG00000015384)	arl6 (ENSGACG00000015382)
Eupecaria_C	ANCESTRAL SPECIES	11	ENSGT00940000153222.a.b.b.b.a	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00500000044924	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000160432	ENSGT00940000162264	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b	ENSGT00940000156459.k
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	7	ENSGT00940000153222.a.b.b.b.a	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00500000044924	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b	ENSGT00940000156459.k	ENSGT00690000101915.i.b
European seabass	MODERN SPECIES	18	lin7c (ENSDLAG00005031763)	ENSDLAG00005022166	ENSDLAG00005022170	ENSDLAG00005032560	ENSDLAG00005022187	ist1 (ENSDLAG00005030321)	dhodh (ENSDLAG00005022215)	ENSDLAG00005022256	sult5a1 (ENSDLAG00005022257)	dpep1 (ENSDLAG00005022269)	SLC22A31 (ENSDLAG00005022297)	ENSDLAG00005022306	SPG7 (ENSDLAG00005022348)	cdh15 (ENSDLAG00005022924)	ACSF3 (ENSDLAG00005022953)	CBFA2T3 (ENSDLAG00005022964) ##22	PABPN1L (ENSDLAG00005030086)	trappc2l (ENSDLAG00005023033)	galns (ENSDLAG00005022981)	cmtm4 (ENSDLAG00005023070)	dync1li2 (ENSDLAG00005023102)	nae1 (ENSDLAG00005023414)	ca7 (ENSDLAG00005023838)	ENSDLAG00005027449	ENSDLAG00005023851	nsun3 (ENSDLAG00005023914)	ENSDLAG00005023919	arl6 (ENSDLAG00005031921)	ENSDLAG00005023951	kctd12.2 (ENSDLAG00005023959)	ENSDLAG00005023975
Large yellow croaker	MODERN SPECIES	480	lin7c (ENSLCRG00005007644)	rplp2l (ENSLCRG00005007641)	ENSLCRG00005007638	mcee (ENSLCRG00005007636)	mphosph10 (ENSLCRG00005007626)	ist1 (ENSLCRG00005007616)	dhodh (ENSLCRG00005007579)	ENSLCRG00005007575	sult5a1 (ENSLCRG00005007571)	dpep1 (ENSLCRG00005007467)	SLC22A31 (ENSLCRG00005007465)	ANKRD11 (ENSLCRG00005007136)	SPG7 (ENSLCRG00005005091)	cdh15 (ENSLCRG00005004877)	ACSF3 (ENSLCRG00005004855)	CBFA2T3 (ENSLCRG00005004847) ##22	galns (ENSLCRG00005004837)	CKLF (ENSLCRG00005004834)	cmtm4 (ENSLCRG00005004829)	dync1li2 (ENSLCRG00005004320)	nae1 (ENSLCRG00005002830)	ca7 (ENSLCRG00005002779)	ENSLCRG00005002769	rrad (ENSLCRG00005002763)	atp5mc3b (ENSLCRG00005002618)	nsun3 (ENSLCRG00005002611)	ENSLCRG00005002578	arl6 (ENSLCRG00005002566)	SLC5A7 (ENSLCRG00005002560)	kctd12.2 (ENSLCRG00005002557)	lmo7b (ENSLCRG00005002529)
Gilthead seabream	MODERN SPECIES	18	rplp2l (ENSSAUG00010002322)	ENSSAUG00010002318	mcee (ENSSAUG00010002300)	mphosph10 (ENSSAUG00010002283)	ist1 (ENSSAUG00010002268)	dhodh (ENSSAUG00010002205)	ENSSAUG00010002182	sult5a1 (ENSSAUG00010002173)	dpep1 (ENSSAUG00010002165)	SLC22A31 (ENSSAUG00010002159)	ANKRD11 (ENSSAUG00010002127)	SPG7 (ENSSAUG00010001951)	cdh15 (ENSSAUG00010001919)	ACSF3 (ENSSAUG00010001908)	ENSSAUG00010001904	CBFA2T3 (ENSSAUG00010001896) ##22	PABPN1L (ENSSAUG00010001890)	trappc2l (ENSSAUG00010001882)	galns (ENSSAUG00010001751)	cmtm3 (ENSSAUG00010001713)	CKLF (ENSSAUG00010001707)	cmtm4 (ENSSAUG00010001697)	dync1li2 (ENSSAUG00010001080)	nae1 (ENSSAUG00010001019)	ca7 (ENSSAUG00010001008)	ENSSAUG00010001007	rrad (ENSSAUG00010001005)	atp5mc3b (ENSSAUG00010001003)	nsun3 (ENSSAUG00010001002)	ENSSAUG00010000991	arl6 (ENSSAUG00010000983)
Percomorphaceae_D	ANCESTRAL SPECIES	11	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000178658	ENSGT00500000044924	ENSGT00940000159903	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Anabantaria	ANCESTRAL SPECIES	11	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000168098	ENSGT00500000044924	ENSGT00940000159903	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b	ENSGT00940000156459.k
Zig-zag eel	MODERN SPECIES	17	ENSMAMG00000001544	ENSMAMG00000028600	ENSMAMG00000001575	ENSMAMG00000001587	ist1 (ENSMAMG00000024849)	ENSMAMG00000028558	dhodh (ENSMAMG00000001638)	HPR (ENSMAMG00000025366)	sult5a1 (ENSMAMG00000001721)	dpep1 (ENSMAMG00000001775)	SLC22A31 (ENSMAMG00000001803)	ENSMAMG00000001834	SPG7 (ENSMAMG00000001883)	cdh15 (ENSMAMG00000001904)	ACSF3 (ENSMAMG00000001946)	CBFA2T3 (ENSMAMG00000001967) ##22	PABPN1L (ENSMAMG00000002051)	trappc2l (ENSMAMG00000027635)	galns (ENSMAMG00000002110)	cmtm4 (ENSMAMG00000002169)	dync1li2 (ENSMAMG00000002195)	ENSMAMG00000027175	nae1 (ENSMAMG00000002260)	ca7 (ENSMAMG00000002369)	ENSMAMG00000024967	ENSMAMG00000002570	rrad (ENSMAMG00000002621)	ENSMAMG00000002628	nsun3 (ENSMAMG00000026492)	ENSMAMG00000002649	arl6 (ENSMAMG00000027051)
Anabantoidei	ANCESTRAL SPECIES	8	ENSGT00940000153222.a.b.b.b.a	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00500000044924	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b	ENSGT00940000156459.k	ENSGT00690000101915.i.b
Siamese fighting fish	MODERN SPECIES	14	lin7c (ENSBSLG00000023819)	ENSBSLG00000023828	FTH1 (ENSBSLG00000023831)	mcee (ENSBSLG00000023849)	mphosph10 (ENSBSLG00000023904)	ist1 (ENSBSLG00000023982)	dhodh (ENSBSLG00000024005)	ENSBSLG00000024019	sult5a1 (ENSBSLG00000024025)	dpep1 (ENSBSLG00000024047)	SLC22A31 (ENSBSLG00000024061)	ANKRD11 (ENSBSLG00000024089)	SPG7 (ENSBSLG00000024121)	cdh15 (ENSBSLG00000024197)	ACSF3 (ENSBSLG00000024221)	CBFA2T3 (ENSBSLG00000000522) ##22	PABPN1L (ENSBSLG00000000563)	trappc2l (ENSBSLG00000000595)	galns (ENSBSLG00000000660)	ENSBSLG00000000755	cmtm3 (ENSBSLG00000000760)	cmtm4 (ENSBSLG00000000765)	dync1li2 (ENSBSLG00000000780)	nae1 (ENSBSLG00000000837)	ca7 (ENSBSLG00000000910)	rrad (ENSBSLG00000001198)	atp5mc3b (ENSBSLG00000001237)	nsun3 (ENSBSLG00000001265)	arl6 (ENSBSLG00000001341)	SLC5A7 (ENSBSLG00000001361)	ENSBSLG00000001393
Climbing perch	MODERN SPECIES	16	ENSATEG00000011083	ENSATEG00000011089	ENSATEG00000028147	ENSATEG00000011131	ist1 (ENSATEG00000011140)	dhodh (ENSATEG00000011177)	ENSATEG00000011210	sult5a1 (ENSATEG00000011268)	dpep1 (ENSATEG00000011300)	SLC22A31 (ENSATEG00000011338)	ENSATEG00000029423	ENSATEG00000011370	SPG7 (ENSATEG00000011391)	cdh15 (ENSATEG00000011487)	ACSF3 (ENSATEG00000011508)	CBFA2T3 (ENSATEG00000011579) ##22	PABPN1L (ENSATEG00000011646)	trappc2l (ENSATEG00000011671)	galns (ENSATEG00000011700)	CKLF (ENSATEG00000011745)	cmtm3 (ENSATEG00000011761)	cmtm4 (ENSATEG00000011783)	dync1li2 (ENSATEG00000011795)	nae1 (ENSATEG00000011863)	ca7 (ENSATEG00000011959)	rrad (ENSATEG00000012125)	ENSATEG00000012129	nsun3 (ENSATEG00000012137)	ENSATEG00000012142	arl6 (ENSATEG00000012204)	ENSATEG00000012228
Carangaria	ANCESTRAL SPECIES	11	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000178658	ENSGT00500000044924	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Carangaria_A	ANCESTRAL SPECIES	19	ENSGT00940000153222.a.b.b.b.a	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00500000044924	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Seriola	ANCESTRAL SPECIES	52	ENSGT00940000153222.a.b.b.b.a	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00500000044924	ENSGT01020000230389.a.b	ENSGT00940000163403	ENSGT00940000159615	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Greater amberjack	MODERN SPECIES	233	rplp2l (ENSSDUG00000007436)	ENSSDUG00000007415	mcee (ENSSDUG00000007405)	mphosph10 (ENSSDUG00000007381)	ist1 (ENSSDUG00000007365)	ENSSDUG00000007359	ENSSDUG00000007352	dhodh (ENSSDUG00000007317)	sult5a1 (ENSSDUG00000007303)	dpep1 (ENSSDUG00000007274)	SLC22A31 (ENSSDUG00000007258)	ANKRD11 (ENSSDUG00000007209)	SPG7 (ENSSDUG00000007147)	cdh15 (ENSSDUG00000007113)	ACSF3 (ENSSDUG00000007083)	CBFA2T3 (ENSSDUG00000007029) ##22	PABPN1L (ENSSDUG00000006986)	trappc2l (ENSSDUG00000007001)	galns (ENSSDUG00000006961)	CKLF (ENSSDUG00000006956)	cmtm3 (ENSSDUG00000006947)	cmtm4 (ENSSDUG00000006932)	dync1li2 (ENSSDUG00000006867)	ENSSDUG00000006857	nae1 (ENSSDUG00000006813)	ca7 (ENSSDUG00000006788)	ENSSDUG00000006744	rrad (ENSSDUG00000006708)	atp5mc3b (ENSSDUG00000006694)	nsun3 (ENSSDUG00000006683)	EPHA6 (ENSSDUG00000006670)
Yellowtail amberjack	MODERN SPECIES	3074	rplp2l (ENSSLDG00000021441)	ENSSLDG00000021450	mcee (ENSSLDG00000021467)	mphosph10 (ENSSLDG00000021481)	ist1 (ENSSLDG00000021497)	dhodh (ENSSLDG00000021516)	ENSSLDG00000021545	ENSSLDG00000021555	sult5a1 (ENSSLDG00000021569)	dpep1 (ENSSLDG00000021578)	SLC22A31 (ENSSLDG00000021603)	ANKRD11 (ENSSLDG00000021617)	SPG7 (ENSSLDG00000021642)	cdh15 (ENSSLDG00000021758)	ACSF3 (ENSSLDG00000021795)	CBFA2T3 (ENSSLDG00000021818) ##22	trappc2l (ENSSLDG00000021857)	PABPN1L (ENSSLDG00000021845)	galns (ENSSLDG00000021875)	CKLF (ENSSLDG00000000093)	cmtm3 (ENSSLDG00000000153)	cmtm4 (ENSSLDG00000000188)	dync1li2 (ENSSLDG00000000227)	ENSSLDG00000000303	nae1 (ENSSLDG00000000326)	ca7 (ENSSLDG00000000431)	ENSSLDG00000000443	rrad (ENSSLDG00000000511)	atp5mc3b (ENSSLDG00000000535)	nsun3 (ENSSLDG00000000551)	ENSSLDG00000000560
Barramundi perch	MODERN SPECIES	243											SLC22A31 (ENSLCAG00010006178)	ANKRD11 (ENSLCAG00010006160)	SPG7 (ENSLCAG00010005785)	cdh15 (ENSLCAG00010005731)	ACSF3 (ENSLCAG00010005728)	CBFA2T3 (ENSLCAG00010005721) ##22	PABPN1L (ENSLCAG00010005716)	trappc2l (ENSLCAG00010005686)	galns (ENSLCAG00010005543)	ENSLCAG00010005521	cmtm3 (ENSLCAG00010005516)	cmtm4 (ENSLCAG00010005502)	dync1li2 (ENSLCAG00010005465)	nae1 (ENSLCAG00010005089)	ca7 (ENSLCAG00010005006)	ENSLCAG00010004998	rrad (ENSLCAG00010004994)	atp5mc3b (ENSLCAG00010004984)	nsun3 (ENSLCAG00010004979)	EPHA6 (ENSLCAG00010004917)	arl6 (ENSLCAG00010004891)
Pleuronectoidei	ANCESTRAL SPECIES	10	ENSGT00940000153222.a.b.b.b.a	ENSGT00550000074828.a	ENSGT00950000182841.b.a.b.a.a	ENSGT00940000153941.b	ENSGT00390000011359	ENSGT00390000007453	ENSGT00940000178658	ENSGT00500000044924	ENSGT00940000159615	ENSGT00940000163403	ENSGT00940000162670	ENSGT00940000155966	ENSGT00940000156329	ENSGT00940000160118	ENSGT00940000157000	ENSGT00950000183176.b.e ##22	ENSGT00940000161325	ENSGT00510000047505	ENSGT00940000157787	ENSGT00940000162264	ENSGT00940000160432	ENSGT00940000159573	ENSGT00390000008295.a	ENSGT00730000112371	ENSGT00550000074901	ENSGT00940000159757	ENSGT00940000165234	ENSGT00940000159836	ENSGT00940000157981.a.a.a	ENSGT00940000153665.b.a.a	ENSGT00940000154490.a.b
Turbot	MODERN SPECIES	17	lin7c (ENSSMAG00000024571)	ENSSMAG00000024542	ENSSMAG00000025209	ENSSMAG00000021363	ENSSMAG00000021362	ist1 (ENSSMAG00000021361)	ENSSMAG00000021359	sult5a1 (ENSSMAG00000021356)	SLC22A31 (ENSSMAG00000021354)	ANKRD11 (ENSSMAG00000021353)	ENSSMAG00000021355	SPG7 (ENSSMAG00000033690)	SPG7 (ENSSMAG00000021352)	cdh15 (ENSSMAG00000021351)	ACSF3 (ENSSMAG00000021350)	CBFA2T3 (ENSSMAG00000021349) ##22	PABPN1L (ENSSMAG00000021348)	trappc2l (ENSSMAG00000021347)	galns (ENSSMAG00000021346)	ENSSMAG00000021345	cmtm3 (ENSSMAG00000032348)	cmtm4 (ENSSMAG00000021343)	dync1li2 (ENSSMAG00000021342)	ENSSMAG00000035978	nae1 (ENSSMAG00000021340)	ca7 (ENSSMAG00000021339)	ENSSMAG00000021338	rrad (ENSSMAG00000021337)	ENSSMAG00000035812	nsun3 (ENSSMAG00000021335)	ENSSMAG00000021334
Tongue sole	MODERN SPECIES	15	ENSCSEG00000001355	rplp2l (ENSCSEG00000001350)	lin7c (ENSCSEG00000001340)	bdnf (ENSCSEG00000001337)	ENSCSEG00000001334	ENSCSEG00000001271	mettl15 (ENSCSEG00000001264)	lgr4 (ENSCSEG00000001253)	mybpc3 (ENSCSEG00000001236)	spi1b (ENSCSEG00000001226)	slc39a13 (ENSCSEG00000001215)	ENSCSEG00000001204	SPG7 (ENSCSEG00000001177)	cdh15 (ENSCSEG00000001171)	ACSF3 (ENSCSEG00000001161)	CBFA2T3 (ENSCSEG00000001154) ##22	pabpn1l (ENSCSEG00000001142)	trappc2l (ENSCSEG00000001136)	galns (ENSCSEG00000001134)	ENSCSEG00000001131	cmtm3 (ENSCSEG00000001124)	cmtm4 (ENSCSEG00000001121)	dync1li2 (ENSCSEG00000001106)	ENSCSEG00000001102	nae1 (ENSCSEG00000001082)	NHS (ENSCSEG00000001077)	ENSCSEG00000001072	ace2 (ENSCSEG00000001064)	zgc:113276 (ENSCSEG00000001060)	ENSCSEG00000001056	vegfd (ENSCSEG00000001052)
Cyclostomata	ANCESTRAL SPECIES	1261															ENSGT00390000011067.B	ENSGT00950000183176.b #22
Lamprey	DUPLICATION
Lamprey	MODERN SPECIES	4112																ENSPMAG00000009503 #22	ENSPMAG00000009505 #22
Lamprey	MODERN SPECIES	4112															ENSPMAG00000009503 #22	ENSPMAG00000009505 #22
Hagfish	DUPLICATION
Hagfish	MODERN SPECIES	599								ENSEBUG00000002664	ENSEBUG00000012515	ENSEBUG00000015107	ENSEBUG00000004214	ENSEBUG00000015374	ENSEBUG00000002852	pskh1 (ENSEBUG00000011738)	DYNLRB2 (ENSEBUG00000003468)	ENSEBUG00000010610 #22	ENSEBUG00000013150
Hagfish	MODERN SPECIES	719															ENSEBUG00000008242	ENSEBUG00000012898 #22	ENSEBUG00000005468	ENSEBUG00000011496	ENSEBUG00000014245	USH1G (ENSEBUG00000014482)	prpsap2 (ENSEBUG00000006471)	ENSEBUG00000006295	gng13b (ENSEBUG00000012294)	C1QTNF6 (ENSEBUG00000003205)