Euteleostomi ANCESTRAL SPECIES 234 ENSGT00700000104550.a ENSGT00940000158764 ENSGT00940000155581.A ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT01100000263518.A.a.a.a ENSGT01080000257410.C ENSGT00940000160139 Sarcopterygii ANCESTRAL SPECIES 268 ENSGT01060000248530.C ENSGT01040000240511.R ENSGT00940000158764 ENSGT00940000155581.A ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 Tetrapoda ANCESTRAL SPECIES 56 ENSGT00390000018330 ENSGT00940000160950 ENSGT00940000163461.b ENSGT00940000160318 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000161648 ENSGT00390000013867 ENSGT00950000183202.a.a ENSGT01040000241001 ENSGT00940000158986 ENSGT00700000104550.a ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT01070000255540 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00530000063829.C Amniota ANCESTRAL SPECIES 19 ENSGT00940000159233 ENSGT00390000018330 ENSGT00940000160950 ENSGT00390000013764 ENSGT00940000156358 ENSGT00950000182982.B ENSGT00940000161648 ENSGT00390000013867 ENSGT00950000183202.a.a ENSGT01040000241001 ENSGT00940000158986 ENSGT00700000104550.a ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00530000063829.C Mammalia ANCESTRAL SPECIES 77 ENSGT00950000186009 ENSGT00720000108866 ENSGT00940000154090.b ENSGT00940000158405 ENSGT00940000156142 ENSGT00940000160486 ENSGT00940000155006 ENSGT00940000158901 ENSGT00950000182893.a.a.b ENSGT00940000160046 ENSGT01030000234633.B.b ENSGT00940000158986 ENSGT00700000104550.a ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00530000063829.C Theria ANCESTRAL SPECIES 19 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00530000063829.C Eutheria ANCESTRAL SPECIES 11 ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Boreoeutheria ANCESTRAL SPECIES 17 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Euarchontoglires ANCESTRAL SPECIES 17 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Euarchontoglires_A ANCESTRAL SPECIES 16 ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Glires ANCESTRAL SPECIES 17 ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Rodentia ANCESTRAL SPECIES 18 ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Rodentia_B ANCESTRAL SPECIES 13 ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Myomorpha ANCESTRAL SPECIES 9 ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Muroidea ANCESTRAL SPECIES 7 ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Muroidea_A ANCESTRAL SPECIES 2 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT00940000171996 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a.c #16 ENSGT01100000263546.d.b.a.a.a.a.d #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Murinae ANCESTRAL SPECIES 1 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT00940000171996 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a.c #16 ENSGT01100000263546.d.b.a.a.a.a.d #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Mus ANCESTRAL SPECIES 1 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a.c #16 ENSGT01100000263546.d.b.a.a.a.a.d #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00860000136314 #28 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 Shrew mouse MODERN SPECIES 16 Sun5 (MGP_PahariEiJ_G0025937) #7 Bpifb2 (MGP_PahariEiJ_G0025938) #8 Bpifb6 (MGP_PahariEiJ_G0025939) #9 Bpifb3 (MGP_PahariEiJ_G0025940) #10 MGP_PahariEiJ_G0025941 #11 Bpifa6 (MGP_PahariEiJ_G0025942) #12 MGP_PahariEiJ_G0025943 #13 MGP_PahariEiJ_G0025944 #14 Bpifa3 (MGP_PahariEiJ_G0025945) #15 Bpifa1 (MGP_PahariEiJ_G0025946) #16 Bpifa5 (MGP_PahariEiJ_G0025947) #17 Bpifb1 (MGP_PahariEiJ_G0025948) #18 Bpifb5 (MGP_PahariEiJ_G0025949) #19 Cdk5rap1 (MGP_PahariEiJ_G0025951) #20 Snta1 (MGP_PahariEiJ_G0025952) #21 Cbfa2t2 (MGP_PahariEiJ_G0025953) #22 Necab3 (MGP_PahariEiJ_G0025954) #23 1700003F12Rik (MGP_PahariEiJ_G0025955) #24 Actl10 (MGP_PahariEiJ_G0025956) #25 E2f1 (MGP_PahariEiJ_G0025957) #26 Pxmp4 (MGP_PahariEiJ_G0025958) #27 MGP_PahariEiJ_G0025959 #28 Zfp341 (MGP_PahariEiJ_G0025960) #29 Chmp4b (MGP_PahariEiJ_G0025961) #30 MGP_PahariEiJ_G0025962 #31 Raly (MGP_PahariEiJ_G0025963) #32 a (MGP_PahariEiJ_G0025964) #33 Eif2s2 (MGP_PahariEiJ_G0025965) #34 MGP_PahariEiJ_G0025966 #35 MGP_PahariEiJ_G0025967 #36 Itch (MGP_PahariEiJ_G0025968) #37 Mus_A ANCESTRAL SPECIES ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a.c #16 ENSGT01100000263546.d.b.a.a.a.a.d #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00860000136314 #28 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 Mus_B ANCESTRAL SPECIES 1 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a.c #16 ENSGT01100000263546.d.b.a.a.a.a.d #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00860000136314 #28 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 Mouse MODERN SPECIES 11 Bpifb2 (ENSMUSG00000027481) #8 Bpifb6 (ENSMUSG00000068009) #9 Bpifb3 (ENSMUSG00000068008) #10 Bpifb4 (ENSMUSG00000074665) #11 Bpifa6 (ENSMUSG00000078998) #12 Bpifa2 (ENSMUSG00000042459) #13 Bpifa3 (ENSMUSG00000027482) #15 Bpifa1 (ENSMUSG00000027483) #16 Bpifa5 (ENSMUSG00000027484) #17 Bpifb1 (ENSMUSG00000027485) #18 Bpifb5 (ENSMUSG00000038572) #19 Bpifb9a (ENSMUSG00000067998) Bpifb9b (ENSMUSG00000067996) Cdk5rap1 (ENSMUSG00000027487) #20 Snta1 (ENSMUSG00000027488) #21 Cbfa2t2 (ENSMUSG00000038533) #22 Necab3 (ENSMUSG00000027489) #23 1700003F12Rik (ENSMUSG00000038523) #24 Actl10 (ENSMUSG00000078129) #25 E2f1 (ENSMUSG00000027490) #26 Pxmp4 (ENSMUSG00000000876) #27 Zfp341 (ENSMUSG00000059842) #29 Chmp4b (ENSMUSG00000038467) #30 Raly (ENSMUSG00000027593) #32 a (ENSMUSG00000027596) #33 Eif2s2 (ENSMUSG00000074656) #34 Ahcy (ENSMUSG00000027597) #36 Itch (ENSMUSG00000027598) #37 Dynlrb1 (ENSMUSG00000047459) Map1lc3a (ENSMUSG00000027602) Pigu (ENSMUSG00000038383) Mus_C ANCESTRAL SPECIES ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a.c #16 ENSGT01100000263546.d.b.a.a.a.a.d #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00860000136314 #28 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 Steppe mouse MODERN SPECIES 27 Cdk5rap1 (ENSMSIG00000001010) #20 Snta1 (ENSMSIG00000001125) #21 ENSMSIG00000001135 Cbfa2t2 (ENSMSIG00000001148) #22 Necab3 (ENSMSIG00000001205) #23 1700003F12Rik (ENSMSIG00000001368) #24 Actl10 (ENSMSIG00000001387) #25 E2f1 (ENSMSIG00000001395) #26 Pxmp4 (ENSMSIG00000001438) #27 ENSMSIG00000001473 #28 Zfp341 (ENSMSIG00000001480) #29 Chmp4b (ENSMSIG00000001595) #30 ENSMSIG00000001612 Raly (ENSMSIG00000001654) #32 Eif2s2 (ENSMSIG00000001803) #34 a (ENSMSIG00000001870) #33 ENSMSIG00000001894 #36 Itch (ENSMSIG00000001955) #37 Dynlrb1 (ENSMSIG00000002016) spretus MODERN SPECIES 11 Bpifb2 (MGP_SPRETEiJ_G0025416) #8 Bpifb6 (MGP_SPRETEiJ_G0025417) #9 Bpifb3 (MGP_SPRETEiJ_G0025418) #10 MGP_SPRETEiJ_G0025419 #11 Bpifa6 (MGP_SPRETEiJ_G0025420) #12 Bpifa2 (MGP_SPRETEiJ_G0025421) #13 Bpifa3 (MGP_SPRETEiJ_G0025422) #15 Bpifa1 (MGP_SPRETEiJ_G0025423) #16 Bpifa5 (MGP_SPRETEiJ_G0025424) #17 Bpifb1 (MGP_SPRETEiJ_G0025425) #18 Bpifb5 (MGP_SPRETEiJ_G0025426) #19 MGP_SPRETEiJ_G0025427 MGP_SPRETEiJ_G0025428 Cdk5rap1 (MGP_SPRETEiJ_G0025429) #20 Snta1 (MGP_SPRETEiJ_G0025430) #21 Cbfa2t2 (MGP_SPRETEiJ_G0025431) #22 Necab3 (MGP_SPRETEiJ_G0025432) #23 1700003F12Rik (MGP_SPRETEiJ_G0025433) #24 Actl10 (MGP_SPRETEiJ_G0025434) #25 E2f1 (MGP_SPRETEiJ_G0025435) #26 Pxmp4 (MGP_SPRETEiJ_G0025436) #27 MGP_SPRETEiJ_G0025437 #28 MGP_SPRETEiJ_G0025438 Chmp4b (MGP_SPRETEiJ_G0025439) #30 MGP_SPRETEiJ_G0025440 Raly (MGP_SPRETEiJ_G0025441) #32 a (MGP_SPRETEiJ_G0025442) #33 Eif2s2 (MGP_SPRETEiJ_G0025443) #34 MGP_SPRETEiJ_G0025444 #36 Itch (MGP_SPRETEiJ_G0025445) #37 Dynlrb1 (MGP_SPRETEiJ_G0025446) Ryukyu mouse MODERN SPECIES 11 MGP_CAROLIEiJ_G0024493 Sun5 (MGP_CAROLIEiJ_G0024494) #7 Bpifb2 (MGP_CAROLIEiJ_G0024495) #8 MGP_CAROLIEiJ_G0024496 #9 Bpifb3 (MGP_CAROLIEiJ_G0024497) #10 MGP_CAROLIEiJ_G0024498 #11 Bpifa6 (MGP_CAROLIEiJ_G0024499) #12 Bpifa2 (MGP_CAROLIEiJ_G0024500) #13 Bpifa3 (MGP_CAROLIEiJ_G0024501) #15 Bpifa1 (MGP_CAROLIEiJ_G0024502) #16 Bpifa5 (MGP_CAROLIEiJ_G0024503) #17 Bpifb1 (MGP_CAROLIEiJ_G0024504) #18 Bpifb5 (MGP_CAROLIEiJ_G0024505) #19 MGP_CAROLIEiJ_G0024507 #20 Snta1 (MGP_CAROLIEiJ_G0024508) #21 Cbfa2t2 (MGP_CAROLIEiJ_G0024509) #22 Necab3 (MGP_CAROLIEiJ_G0024510) #23 1700003F12Rik (MGP_CAROLIEiJ_G0024511) #24 Actl10 (MGP_CAROLIEiJ_G0024512) #25 E2f1 (MGP_CAROLIEiJ_G0024513) #26 Pxmp4 (MGP_CAROLIEiJ_G0024514) #27 MGP_CAROLIEiJ_G0024515 #28 Zfp341 (MGP_CAROLIEiJ_G0024516) #29 Chmp4b (MGP_CAROLIEiJ_G0024517) #30 MGP_CAROLIEiJ_G0024518 Raly (MGP_CAROLIEiJ_G0024519) #32 a (MGP_CAROLIEiJ_G0024520) #33 Eif2s2 (MGP_CAROLIEiJ_G0024521) #34 MGP_CAROLIEiJ_G0024522 #36 Itch (MGP_CAROLIEiJ_G0024523) #37 Dynlrb1 (MGP_CAROLIEiJ_G0024524) Rat MODERN SPECIES 13 Sun5 (ENSRNOG00000027221) #7 Bpifb2 (ENSRNOG00000012197) #8 Bpifb6 (ENSRNOG00000013371) #9 Bpifb3 (ENSRNOG00000034174) #11 Bpifa6 (ENSRNOG00000043258) #12 Bpifa2 (ENSRNOG00000013540) #13 Bpifa2f (ENSRNOG00000036870) Bpifa3 (ENSRNOG00000013778) #15 Bpifa1 (ENSRNOG00000013859) #16 Bpifa5 (ENSRNOG00000013908) #17 Bpifb1 (ENSRNOG00000015468) #18 Bpifb5 (ENSRNOG00000025238) #19 LOC690507 (ENSRNOG00000015637) ENSRNOG00000064935 #20 Snta1 (ENSRNOG00000016062) #21 Cbfa2t2 (ENSRNOG00000016352) #22 Sms-ps2 (ENSRNOG00000031275) AABR07054362.1 (ENSRNOG00000050899) E2f1 (ENSRNOG00000016708) #26 RGD1561517 (ENSRNOG00000016583) #24 Actl10 (ENSRNOG00000036864) #25 Pxmp4 (ENSRNOG00000016975) #27 Zfp341 (ENSRNOG00000017086) #29 ENSRNOG00000063087 AABR07054368.1 (ENSRNOG00000029996) Chmp4b (ENSRNOG00000046585) #30 LOC690597 (ENSRNOG00000055182) Raly (ENSRNOG00000017405) #32 Eif2s2 (ENSRNOG00000017447) #34 Asip (ENSRNOG00000017701) #33 Ahcy (ENSRNOG00000017777) #36 Cricetidae ANCESTRAL SPECIES 5 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT00940000171996 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a.c #16 ENSGT01100000263546.d.b.a.a.a.a.d #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Cricetinae ANCESTRAL SPECIES 1 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a.c #16 ENSGT01100000263546.d.b.a.a.a.a.d #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804.y.b #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Chinese hamster chok1gshd MODERN SPECIES 188 Bpifb2 (ENSCGRG00001009296) #8 Bpifb6 (ENSCGRG00001023599) #9 Bpifb3 (ENSCGRG00001020775) #10 Bpifb4 (ENSCGRG00001014345) #11 Bpifa6 (ENSCGRG00001023934) #12 Bpifa2 (ENSCGRG00001020519) #13 Bpifa3 (ENSCGRG00001017514) #15 Bpifa1 (ENSCGRG00001014265) #16 Bpifa5 (ENSCGRG00001018207) #17 Bpifb1 (ENSCGRG00001022649) #18 Bpifb5 (ENSCGRG00001022241) #19 ENSCGRG00001021876 ENSCGRG00001018519 Cdk5rap1 (ENSCGRG00001020687) #20 Snta1 (ENSCGRG00001016422) #21 Cbfa2t2 (ENSCGRG00001014529) #22 1700003F12Rik (ENSCGRG00001012971) #24 Actl10 (ENSCGRG00001006945) #25 Necab3 (ENSCGRG00001013760) #23 E2f1 (ENSCGRG00001001729) #26 Pxmp4 (ENSCGRG00001010342) #27 Zfp341 (ENSCGRG00001014101) #29 Chmp4b (ENSCGRG00001000652) #30 Raly (ENSCGRG00001014652) #32 ENSCGRG00001001614 #34 ENSCGRG00001004778 a (ENSCGRG00001021768) #33 ENSCGRG00001012673 #36 Itch (ENSCGRG00001020207) #37 Dynlrb1 (ENSCGRG00001013277) Map1lc3a (ENSCGRG00001005970) Golden Hamster MODERN SPECIES 791 Bpifa3 (ENSMAUG00000013387) #15 Bpifa1 (ENSMAUG00000014646) #16 Bpifa5 (ENSMAUG00000012713) #17 Bpifb1 (ENSMAUG00000011247) #18 Bpifb5 (ENSMAUG00000008139) #19 Cdk5rap1 (ENSMAUG00000000980) #20 Snta1 (ENSMAUG00000013984) #21 Cbfa2t2 (ENSMAUG00000001412) #22 1700003F12Rik (ENSMAUG00000022072) #24 Necab3 (ENSMAUG00000015672) #23 E2f1 (ENSMAUG00000000913) #26 Pxmp4 (ENSMAUG00000015504) #27 Zfp341 (ENSMAUG00000011481) #29 Chmp4b (ENSMAUG00000020158) #30 Raly (ENSMAUG00000005739) #32 ENSMAUG00000009771 #34 a (ENSMAUG00000021663) #33 ENSMAUG00000006591 #36 Itch (ENSMAUG00000001009) #37 Dynlrb1 (ENSMAUG00000019405) Pigu (ENSMAUG00000012275) Trp53inp2 (ENSMAUG00000004915) ENSMAUG00000020422 Cricetidae_B ANCESTRAL SPECIES 4 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT00940000171996 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a.c #16 ENSGT01100000263546.d.b.a.a.a.a.d #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Prairie vole MODERN SPECIES 357 Tmem74b (ENSMOCG00000012931) Rad21l (ENSMOCG00000001417) Snph (ENSMOCG00000019255) Sdcbp2 (ENSMOCG00000018189) Fkbp1a (ENSMOCG00000015631) Nsfl1c (ENSMOCG00000002492) Bpifa6 (ENSMOCG00000013390) #12 Bpifa2 (ENSMOCG00000020017) #13 Bpifa3 (ENSMOCG00000007021) #15 Bpifa1 (ENSMOCG00000022067) #16 Bpifa5 (ENSMOCG00000015053) #17 Bpifb1 (ENSMOCG00000011657) #18 Bpifb5 (ENSMOCG00000002643) #19 Cdk5rap1 (ENSMOCG00000002846) #20 Snta1 (ENSMOCG00000005630) #21 Cbfa2t2 (ENSMOCG00000015541) #22 1700003F12Rik (ENSMOCG00000019597) #24 Necab3 (ENSMOCG00000000497) #23 E2f1 (ENSMOCG00000012464) #26 Pxmp4 (ENSMOCG00000003745) #27 Zfp341 (ENSMOCG00000004075) #29 Chmp4b (ENSMOCG00000022208) #30 ENSMOCG00000017228 Raly (ENSMOCG00000009450) #32 Eif2s2 (ENSMOCG00000012809) #34 a (ENSMOCG00000006735) #33 ENSMOCG00000021599 #36 Itch (ENSMOCG00000015148) #37 Dynlrb1 (ENSMOCG00000001553) Map1lc3a (ENSMOCG00000022232) Pigu (ENSMOCG00000012991) Northern American deer mouse MODERN SPECIES 17 Bpifb3 (ENSPEMG00000016514) #10 Bpifb4 (ENSPEMG00000008153) #11 Bpifa6 (ENSPEMG00000016037) #12 Bpifa2 (ENSPEMG00000015949) #13 ENSPEMG00000027075 ENSPEMG00000028840 Bpifa3 (ENSPEMG00000008523) #15 Bpifa1 (ENSPEMG00000014511) #16 Bpifa5 (ENSPEMG00000011773) #17 Bpifb1 (ENSPEMG00000018971) #18 Bpifb5 (ENSPEMG00000007792) #19 ENSPEMG00000011960 Cdk5rap1 (ENSPEMG00000017045) #20 Snta1 (ENSPEMG00000003510) #21 ENSPEMG00000030394 Cbfa2t2 (ENSPEMG00000023470) #22 Necab3 (ENSPEMG00000011260) #23 1700003F12Rik (ENSPEMG00000031171) #24 Actl10 (ENSPEMG00000026578) #25 E2f1 (ENSPEMG00000018049) #26 Pxmp4 (ENSPEMG00000023523) #27 Zfp341 (ENSPEMG00000022506) #29 Chmp4b (ENSPEMG00000021658) #30 Raly (ENSPEMG00000021466) #32 Eif2s2 (ENSPEMG00000023172) #34 a (ENSPEMG00000023599) #33 ENSPEMG00000024071 #36 Itch (ENSPEMG00000021623) #37 Dynlrb1 (ENSPEMG00000001641) Map1lc3a (ENSPEMG00000001010) Pigu (ENSPEMG00000001185) Upper Galilee mountains blind mole rat MODERN SPECIES 1717 Cbfa2t2 (ENSNGAG00000006999) #22 Necab3 (ENSNGAG00000016266) #23 E2f1 (ENSNGAG00000012431) #26 Pxmp4 (ENSNGAG00000005193) #27 Zfp341 (ENSNGAG00000009722) #29 Chmp4b (ENSNGAG00000011108) #30 Raly (ENSNGAG00000001263) #32 Eif2s2 (ENSNGAG00000004708) #34 Lesser Egyptian jerboa MODERN SPECIES 149 ENSJJAG00000021569 ENSJJAG00000000449 Commd7 (ENSJJAG00000010654) ENSJJAG00000000621 Mapre1 (ENSJJAG00000018249) Sun5 (ENSJJAG00000021388) #7 Bpifb2 (ENSJJAG00000017859) #8 ENSJJAG00000019744 #9 Bpifb4 (ENSJJAG00000019678) #11 Bpifa3 (ENSJJAG00000012935) #15 ENSJJAG00000022519 #17 Bpifb1 (ENSJJAG00000023259) #18 Bpifb5 (ENSJJAG00000016027) #19 ENSJJAG00000016210 Snta1 (ENSJJAG00000020267) #21 Cbfa2t2 (ENSJJAG00000012293) #22 Necab3 (ENSJJAG00000020960) #23 1700003F12Rik (ENSJJAG00000010475) #24 E2f1 (ENSJJAG00000022378) #26 Pxmp4 (ENSJJAG00000016829) #27 Zfp341 (ENSJJAG00000020905) #29 Chmp4b (ENSJJAG00000013547) #30 Raly (ENSJJAG00000008473) #32 Eif2s2 (ENSJJAG00000014081) #34 ENSJJAG00000001144 a (ENSJJAG00000018926) #33 ENSJJAG00000022935 #36 Itch (ENSJJAG00000000211) #37 ENSJJAG00000005483 Map1lc3a (ENSJJAG00000010977) Pigu (ENSJJAG00000021314) Kangaroo rat MODERN SPECIES 332 ENSDORG00000028887 Nol4l (ENSDORG00000027893) Commd7 (ENSDORG00000002116) ENSDORG00000012834 Mapre1 (ENSDORG00000023413) Bpifb2 (ENSDORG00000004323) #8 Bpifb6 (ENSDORG00000004324) #9 Bpifb3 (ENSDORG00000029748) #10 Bpifb4 (ENSDORG00000001190) #11 Bpifa3 (ENSDORG00000002275) #15 ENSDORG00000002276 #17 Bpifb1 (ENSDORG00000002282) #18 Bpifb5 (ENSDORG00000028380) #19 Cdk5rap1 (ENSDORG00000004622) #20 Snta1 (ENSDORG00000029237) #21 Cbfa2t2 (ENSDORG00000001656) #22 Necab3 (ENSDORG00000013792) #23 E2f1 (ENSDORG00000013793) #26 Pxmp4 (ENSDORG00000030129) #27 Zfp341 (ENSDORG00000000005) #29 Chmp4b (ENSDORG00000011539) #30 Raly (ENSDORG00000013400) #32 Eif2s2 (ENSDORG00000001920) #34 a (ENSDORG00000013768) #33 ENSDORG00000012590 #36 Itch (ENSDORG00000027257) #37 Dynlrb1 (ENSDORG00000028607) ENSDORG00000029351 Pigu (ENSDORG00000001715) Trp53inp2 (ENSDORG00000026160) ENSDORG00000016245 Rodentia_A ANCESTRAL SPECIES 17 ENSGT00940000156928 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Hystricomorpha ANCESTRAL SPECIES 10 ENSGT00520000055578.a.a.c ENSGT00940000157729 ENSGT00390000012419 ENSGT00940000156928 ENSGT00490000043329.a.a.a ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Hystricomorpha_a ANCESTRAL SPECIES 8 ENSGT00520000055578.a.a.c ENSGT00940000157729 ENSGT00390000012419 ENSGT00940000156928 ENSGT00490000043329.a.a.a ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Guinea pig MODERN SPECIES 45 ENSCPOG00000013128 #15 BPIFA1 (ENSCPOG00000014220) #17 BPIFB1 (ENSCPOG00000005568) #18 CDK5RAP1 (ENSCPOG00000006663) #20 SNTA1 (ENSCPOG00000005179) #21 CBFA2T2 (ENSCPOG00000001721) #22 NECAB3 (ENSCPOG00000020859) #23 ENSCPOG00000022109 #25 E2F1 (ENSCPOG00000001800) #26 PXMP4 (ENSCPOG00000024804) #27 ZNF341 (ENSCPOG00000003820) #29 CHMP4B (ENSCPOG00000035794) #30 RALY (ENSCPOG00000000309) #32 EIF2S2 (ENSCPOG00000040226) #34 ASIP (ENSCPOG00000005139) #33 AHCY (ENSCPOG00000014740) #36 ITCH (ENSCPOG00000013787) #37 DYNLRB1 (ENSCPOG00000013798) PIGU (ENSCPOG00000013806) MAP1LC3A (ENSCPOG00000030093) TP53INP2 (ENSCPOG00000030059) Hystricomorpha_b ANCESTRAL SPECIES 16 ENSGT00520000055578.a.a.c ENSGT00940000157729 ENSGT00390000012419 ENSGT00940000156928 ENSGT00490000043329.a.a.a.i.a ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Long-tailed chinchilla MODERN SPECIES 129 ASXL1 (ENSCLAG00000017264) NOL4L (ENSCLAG00000017265) COMMD7 (ENSCLAG00000017227) DNMT3B (ENSCLAG00000017043) ENSCLAG00000017109 SUN5 (ENSCLAG00000017254) #7 BPIFB2 (ENSCLAG00000017195) #8 BPIFB6 (ENSCLAG00000016956) #9 BPIFB3 (ENSCLAG00000016914) #10 BPIFB4 (ENSCLAG00000016722) #11 BPIFA3 (ENSCLAG00000016843) #15 BPIFA1 (ENSCLAG00000017206) #17 BPIFB1 (ENSCLAG00000016830) #18 CDK5RAP1 (ENSCLAG00000015460) #20 SNTA1 (ENSCLAG00000015283) #21 CBFA2T2 (ENSCLAG00000017277) #22 ENSCLAG00000017072 #24 ACTL10 (ENSCLAG00000018112) #25 NECAB3 (ENSCLAG00000017054) #23 E2F1 (ENSCLAG00000017077) #26 PXMP4 (ENSCLAG00000017245) #27 ZNF341 (ENSCLAG00000016902) #29 CHMP4B (ENSCLAG00000017205) #30 RALY (ENSCLAG00000016899) #32 ENSCLAG00000017263 #34 ASIP (ENSCLAG00000017188) #33 AHCY (ENSCLAG00000017278) #36 ITCH (ENSCLAG00000016997) #37 DYNLRB1 (ENSCLAG00000016878) MAP1LC3A (ENSCLAG00000016760) PIGU (ENSCLAG00000016489) Degu MODERN SPECIES 78 ENSODEG00000012036 SUN5 (ENSODEG00000012284) #7 BPIFB2 (ENSODEG00000012498) #8 BPIFB6 (ENSODEG00000011706) #9 BPIFB3 (ENSODEG00000012502) #10 BPIFB4 (ENSODEG00000013037) #11 ENSODEG00000012670 ENSODEG00000012886 ENSODEG00000013174 BPIFA3 (ENSODEG00000011797) #15 BPIFA1 (ENSODEG00000011803) #17 BPIFB1 (ENSODEG00000012392) #18 CDK5RAP1 (ENSODEG00000013190) #20 SNTA1 (ENSODEG00000012817) #21 ENSODEG00000019960 CBFA2T2 (ENSODEG00000012562) #22 ENSODEG00000013862 NECAB3 (ENSODEG00000012739) #23 ENSODEG00000013210 #24 E2F1 (ENSODEG00000012327) #26 PXMP4 (ENSODEG00000015173) #27 ZNF341 (ENSODEG00000013884) #29 ENSODEG00000012366 #30 ENSODEG00000012831 #32 ENSODEG00000012151 #34 ENSODEG00000012943 ENSODEG00000015189 ENSODEG00000020169 ASIP (ENSODEG00000013289) #33 AHCY (ENSODEG00000013391) #36 ENSODEG00000013834 Naked mole-rat female MODERN SPECIES 6 ENSHGLG00000039669 CDK5RAP1 (ENSHGLG00000005146) #20 SNTA1 (ENSHGLG00000006583) #21 ENSHGLG00000018147 ENSHGLG00000047164 CBFA2T2 (ENSHGLG00000018266) #22 ENSHGLG00000009659 #23 E2F1 (ENSHGLG00000009301) #26 ENSHGLG00000041428 PXMP4 (ENSHGLG00000016991) #27 ZNF341 (ENSHGLG00000013786) #29 ENSHGLG00000041357 #30 ENSHGLG00000032344 ENSHGLG00000042490 RALY (ENSHGLG00000017779) #32 ENSHGLG00000031940 #33 AHCY (ENSHGLG00000009751) #36 ITCH (ENSHGLG00000005001) #37 ENSHGLG00000010397 MAP1LC3A (ENSHGLG00000009257) ENSHGLG00000008565 Sciuridae ANCESTRAL SPECIES 13 ENSGT00940000156928 ENSGT00490000043329.a.a.a.l ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Marmotini ANCESTRAL SPECIES 5 ENSGT00940000156928 ENSGT00490000043329.a.a.a.l ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Marmotini_b ANCESTRAL SPECIES 29 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A.o.b ENSGT00940000158853 ENSGT00390000014941 Arctic ground squirrel MODERN SPECIES 24 ENSUPAG00010005007 #18 ENSUPAG00010004998 #19 ENSUPAG00010004995 CDK5RAP1 (ENSUPAG00010004922) #20 SNTA1 (ENSUPAG00010004904) #21 CBFA2T2 (ENSUPAG00010004884) #22 C20orf144 (ENSUPAG00010004879) #24 ACTL10 (ENSUPAG00010004872) #25 NECAB3 (ENSUPAG00010004839) #23 E2F1 (ENSUPAG00010004824) #26 PXMP4 (ENSUPAG00010004822) #27 ZNF341 (ENSUPAG00010004795) #29 CHMP4B (ENSUPAG00010004793) #30 RALY (ENSUPAG00010004731) #32 EIF2S2 (ENSUPAG00010004723) #34 ASIP (ENSUPAG00010004712) #33 AHCY (ENSUPAG00010004706) #36 ITCH (ENSUPAG00010004671) #37 DYNLRB1 (ENSUPAG00010004657) MAP1LC3A (ENSUPAG00010004647) PIGU (ENSUPAG00010004614) Squirrel MODERN SPECIES 161 CDK5RAP1 (ENSSTOG00000005492) #20 SNTA1 (ENSSTOG00000020522) #21 CBFA2T2 (ENSSTOG00000003478) #22 ACTL10 (ENSSTOG00000000902) #25 NECAB3 (ENSSTOG00000028643) #23 E2F1 (ENSSTOG00000002735) #26 PXMP4 (ENSSTOG00000002748) #27 ZNF341 (ENSSTOG00000002753) #29 CHMP4B (ENSSTOG00000005242) #30 RALY (ENSSTOG00000008810) #32 EIF2S2 (ENSSTOG00000008821) #34 ASIP (ENSSTOG00000003501) #33 AHCY (ENSSTOG00000003013) #36 ITCH (ENSSTOG00000014804) #37 ENSSTOG00000014820 MAP1LC3A (ENSSTOG00000006158) PIGU (ENSSTOG00000014830) TP53INP2 (ENSSTOG00000014835) Alpin marmot MODERN SPECIES ENSMMMG00000023683 EFCAB8 (ENSMMMG00000023682) SUN5 (ENSMMMG00000023678) #7 BPIFB2 (ENSMMMG00000023676) #8 BPIFB6 (ENSMMMG00000023672) #9 BPIFB3 (ENSMMMG00000023666) #10 BPIFB4 (ENSMMMG00000023664) #11 ENSMMMG00000023662 ENSMMMG00000023661 BPIFA3 (ENSMMMG00000023655) #15 BPIFA1 (ENSMMMG00000023653) #17 BPIFB1 (ENSMMMG00000023647) #18 ENSMMMG00000023646 #19 CDK5RAP1 (ENSMMMG00000023644) #20 SNTA1 (ENSMMMG00000023469) #21 CBFA2T2 (ENSMMMG00000023462) #22 ACTL10 (ENSMMMG00000023461) #25 NECAB3 (ENSMMMG00000023457) #23 E2F1 (ENSMMMG00000023454) #26 PXMP4 (ENSMMMG00000023451) #27 ZNF341 (ENSMMMG00000023444) #29 CHMP4B (ENSMMMG00000023441) #30 RALY (ENSMMMG00000023423) #32 EIF2S2 (ENSMMMG00000023422) #34 ASIP (ENSMMMG00000023418) #33 AHCY (ENSMMMG00000023416) #36 ENSMMMG00000023413 ITCH (ENSMMMG00000023404) #37 DYNLRB1 (ENSMMMG00000023395) PIGU (ENSMMMG00000023384) NCOA6 (ENSMMMG00000023374) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 11 STOML1 (ENSSVLG00005015186) PML (ENSSVLG00005015325) ISLR2 (ENSSVLG00005015492) ISLR (ENSSVLG00005015502) STRA6 (ENSSVLG00005015566) CCDC33 (ENSSVLG00005016264) CYP11A1 (ENSSVLG00005016426) SEMA7A (ENSSVLG00005016591) UBL7 (ENSSVLG00005016929) ARID3B (ENSSVLG00005016981) ENSSVLG00005017093 CLK3 (ENSSVLG00005017141) ENSSVLG00005017169 EXOC1 (ENSSVLG00005017188) CYP1A1 (ENSSVLG00005017319) ENSSVLG00005017497 #22 CYP1A2 (ENSSVLG00005017562) CSK (ENSSVLG00005017636) CPLX3 (ENSSVLG00005018221) ULK3 (ENSSVLG00005018262) SCAMP2 (ENSSVLG00005018318) MPI (ENSSVLG00005018379) FAM219B (ENSSVLG00005018600) ENSSVLG00005018668 RPP25 (ENSSVLG00005018756) SCAMP5 (ENSSVLG00005018788) PPCDC (ENSSVLG00005018891) C15orf39 (ENSSVLG00005019039) ENSSVLG00005019078 COMMD4 (ENSSVLG00005019452) NEIL1 (ENSSVLG00005019603) Eurasian red squirrel MODERN SPECIES 11 COMMD7 (ENSSVLG00005002025) ENSSVLG00005002127 ENSSVLG00005002322 ENSSVLG00005002338 SUN5 (ENSSVLG00005002374) #7 BPIFB2 (ENSSVLG00005002451) #8 BPIFB6 (ENSSVLG00005002490) #9 BPIFB3 (ENSSVLG00005002532) #10 BPIFB4 (ENSSVLG00005002569) #11 BPIFA3 (ENSSVLG00005002605) #15 BPIFA1 (ENSSVLG00005002640) #17 BPIFB1 (ENSSVLG00005002680) #18 ENSSVLG00005002725 CDK5RAP1 (ENSSVLG00005002783) #20 SNTA1 (ENSSVLG00005002824) #21 CBFA2T2 (ENSSVLG00005002847) #22 ENSSVLG00005002886 NECAB3 (ENSSVLG00005002907) #23 ENSSVLG00005002949 #24 ACTL10 (ENSSVLG00005002962) #25 E2F1 (ENSSVLG00005002971) #26 PXMP4 (ENSSVLG00005002986) #27 ZNF341 (ENSSVLG00005003010) #29 ENSSVLG00005003036 CHMP4B (ENSSVLG00005003046) #30 ENSSVLG00005003066 #32 EIF2S2 (ENSSVLG00005003099) #34 ENSSVLG00005003129 ENSSVLG00005003145 ENSSVLG00005003157 ASIP (ENSSVLG00005003171) #33 Lagomorpha ANCESTRAL SPECIES 33 ENSGT00940000156928 ENSGT00490000043329.a.a.a ENSGT00930000151259 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000167211 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00390000014941 ENSGT00730000111114 ENSGT00940000156917 Rabbit MODERN SPECIES 15 ASXL1 (ENSOCUG00000035849) NOL4L (ENSOCUG00000010835) ENSOCUG00000014339 DNMT3B (ENSOCUG00000017835) MAPRE1 (ENSOCUG00000024265) ENSOCUG00000035490 SUN5 (ENSOCUG00000022223) #7 BPIFB2 (ENSOCUG00000027554) #8 BPIFB6 (ENSOCUG00000006815) #9 BPIFB3 (ENSOCUG00000014883) #10 ENSOCUG00000015717 #15 BPIFA1 (ENSOCUG00000007538) #17 ENSOCUG00000017051 #18 CDK5RAP1 (ENSOCUG00000017069) #20 SNTA1 (ENSOCUG00000011916) #21 CBFA2T2 (ENSOCUG00000000849) #22 ENSOCUG00000000854 #25 NECAB3 (ENSOCUG00000000850) #23 PXMP4 (ENSOCUG00000005415) #27 ZNF341 (ENSOCUG00000024028) #29 RALY (ENSOCUG00000000477) #32 EIF2S2 (ENSOCUG00000000481) #34 ENSOCUG00000038624 asip (ENSOCUG00000011138) #33 ENSOCUG00000036618 ENSOCUG00000008592 #36 ITCH (ENSOCUG00000015354) #37 ENSOCUG00000021027 PIGU (ENSOCUG00000009627) ENSOCUG00000009634 NCOA6 (ENSOCUG00000009637) Pika MODERN SPECIES 4188 CBFA2T2 (ENSOPRG00000001392) #22 NECAB3 (ENSOPRG00000001421) #23 ENSOPRG00000001443 #24 E2F1 (ENSOPRG00000001479) #26 PXMP4 (ENSOPRG00000001496) #27 Tree shrew MODERN SPECIES 3726 ENSTBEG00000015938 #22 ENSTBEG00000016109 #24 E2F1 (ENSTBEG00000016287) #26 ZNF341 (ENSTBEG00000016904) #29 CHMP4B (ENSTBEG00000017021) #30 Primates ANCESTRAL SPECIES 17 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.b ##19 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Strepsirrhini ANCESTRAL SPECIES 12 ENSGT00940000156928 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Lemuriformes ANCESTRAL SPECIES 10 ENSGT00940000157729 ENSGT00390000012419 ENSGT00940000156928 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 9 NOL4L (ENSMICG00000006651) COMMD7 (ENSMICG00000006672) DNMT3B (ENSMICG00000006679) MAPRE1 (ENSMICG00000047719) EFCAB8 (ENSMICG00000036641) SUN5 (ENSMICG00000001971) #7 BPIFB2 (ENSMICG00000001979) #8 BPIFB6 (ENSMICG00000001984) #9 BPIFB3 (ENSMICG00000001990) #10 BPIFB4 (ENSMICG00000026403) #11 BPIFA2 (ENSMICG00000013403) #13 BPIFA1 (ENSMICG00000004348) #17 BPIFB1 (ENSMICG00000004357) #18 CDK5RAP1 (ENSMICG00000004382) #20 SNTA1 (ENSMICG00000004936) #21 ENSMICG00000006895 #22 NECAB3 (ENSMICG00000006906) #23 E2F1 (ENSMICG00000006921) #26 ENSMICG00000028174 #27 ZNF341 (ENSMICG00000047832) #29 ENSMICG00000042802 #30 RALY (ENSMICG00000039074) #32 ENSMICG00000006944 #34 ASIP (ENSMICG00000044506) #33 AHCY (ENSMICG00000003232) #36 ENSMICG00000032740 ENSMICG00000034345 ITCH (ENSMICG00000003238) #37 DYNLRB1 (ENSMICG00000003253) MAP1LC3A (ENSMICG00000028466) PIGU (ENSMICG00000003257) Mouse lemur MODERN SPECIES 4 OLFM4 (ENSMICG00000001798) ENSMICG00000028372 PCDH17 (ENSMICG00000008032) DIAPH3 (ENSMICG00000011388) ENSMICG00000043260 TDRD3 (ENSMICG00000009982) PCDH20 (ENSMICG00000032560) ENSMICG00000038136 ENSMICG00000045460 PCDH9 (ENSMICG00000002338) ENSMICG00000026328 KLHL1 (ENSMICG00000005245) ENSMICG00000046198 DACH1 (ENSMICG00000031012) ENSMICG00000037073 ENSMICG00000042445 #22 BORA (ENSMICG00000008756) DIS3 (ENSMICG00000004703) PIBF1 (ENSMICG00000011928) KLF5 (ENSMICG00000014481) KLF12 (ENSMICG00000005731) TBC1D4 (ENSMICG00000006748) COMMD6 (ENSMICG00000014323) UCHL3 (ENSMICG00000014333) LMO7 (ENSMICG00000014340) KCTD12 (ENSMICG00000002666) ACOD1 (ENSMICG00000027082) CLN5 (ENSMICG00000036480) FBXL3 (ENSMICG00000002671) MYCBP2 (ENSMICG00000002673) SCEL (ENSMICG00000002703) Lemuriformes_a ANCESTRAL SPECIES 26 ENSGT00940000157729 ENSGT00390000012419 ENSGT00940000156928 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Coquerels sifaka MODERN SPECIES 126 ENSPCOG00000021565 DNMT3B (ENSPCOG00000025216) ENSPCOG00000011905 MAPRE1 (ENSPCOG00000011361) EFCAB8 (ENSPCOG00000003137) SUN5 (ENSPCOG00000021842) #7 BPIFB2 (ENSPCOG00000024187) #8 BPIFB6 (ENSPCOG00000019939) #9 BPIFB3 (ENSPCOG00000002263) #10 BPIFB4 (ENSPCOG00000014355) #11 BPIFA2 (ENSPCOG00000020981) #13 BPIFA1 (ENSPCOG00000015572) #17 BPIFB1 (ENSPCOG00000028115) #18 CDK5RAP1 (ENSPCOG00000024202) #20 SNTA1 (ENSPCOG00000027507) #21 CBFA2T2 (ENSPCOG00000018468) #22 ENSPCOG00000016999 #24 NECAB3 (ENSPCOG00000028089) #23 E2F1 (ENSPCOG00000020987) #26 PXMP4 (ENSPCOG00000024717) #27 ZNF341 (ENSPCOG00000023267) #29 CHMP4B (ENSPCOG00000019410) #30 RALY (ENSPCOG00000016363) #32 EIF2S2 (ENSPCOG00000023384) #34 ENSPCOG00000016432 ENSPCOG00000016748 ASIP (ENSPCOG00000010026) #33 AHCY (ENSPCOG00000028404) #36 ENSPCOG00000023647 ITCH (ENSPCOG00000009922) #37 ENSPCOG00000014374 Greater bamboo lemur MODERN SPECIES 98 ENSPSMG00000017928 #20 SNTA1 (ENSPSMG00000017942) #21 CBFA2T2 (ENSPSMG00000017990) #22 NECAB3 (ENSPSMG00000018052) #23 ENSPSMG00000018069 #24 ACTL10 (ENSPSMG00000018073) #25 E2F1 (ENSPSMG00000018083) #26 PXMP4 (ENSPSMG00000018104) #27 ZNF341 (ENSPSMG00000018155) #29 CHMP4B (ENSPSMG00000018182) #30 RALY (ENSPSMG00000018249) #32 EIF2S2 (ENSPSMG00000018322) #34 ASIP (ENSPSMG00000018334) #33 AHCY (ENSPSMG00000018371) #36 ITCH (ENSPSMG00000018448) #37 ENSPSMG00000018498 MAP1LC3A (ENSPSMG00000018505) PIGU (ENSPSMG00000018561) Bushbaby MODERN SPECIES 140 ENSOGAG00000026557 SUN5 (ENSOGAG00000015660) #7 BPIFB2 (ENSOGAG00000015664) #8 BPIFB6 (ENSOGAG00000015669) #9 BPIFB3 (ENSOGAG00000015673) #10 BPIFB4 (ENSOGAG00000010737) #11 ENSOGAG00000027213 BPIFA2 (ENSOGAG00000010742) #13 BPIFA1 (ENSOGAG00000010750) #17 BPIFB1 (ENSOGAG00000010753) #18 ENSOGAG00000024646 #19 ENSOGAG00000010760 CDK5RAP1 (ENSOGAG00000010764) #20 SNTA1 (ENSOGAG00000027133) #21 ENSOGAG00000032821 CBFA2T2 (ENSOGAG00000015051) #22 NECAB3 (ENSOGAG00000028758) #23 ACTL10 (ENSOGAG00000010438) #25 E2F1 (ENSOGAG00000024304) #26 PXMP4 (ENSOGAG00000010440) #27 ZNF341 (ENSOGAG00000010441) #29 CHMP4B (ENSOGAG00000010444) #30 ENSOGAG00000013532 RALY (ENSOGAG00000032337) #32 ENSOGAG00000001417 #34 AHCY (ENSOGAG00000016787) #36 ITCH (ENSOGAG00000016792) #37 ENSOGAG00000016802 MAP1LC3A (ENSOGAG00000027682) PIGU (ENSOGAG00000003518) TP53INP2 (ENSOGAG00000006332) Haplorrhini ANCESTRAL SPECIES 13 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Simiiformes ANCESTRAL SPECIES 18 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804.cb.b #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Catarrhini ANCESTRAL SPECIES 19 ENSGT00940000156928 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00910000147530 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.u #30 ENSGT00390000013771.v ENSGT00940000157601 #32 ENSGT00390000001804.cb.b #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000153675.a.a.b.e.a.g.b ENSGT00940000157014 #37 Hominoidea ANCESTRAL SPECIES 17 ENSGT00940000156928 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00910000147530 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.u #30 ENSGT00390000013771.v ENSGT00940000157601 #32 ENSGT00390000001804.cb.b.c.a #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000153675.a.a.b.e.a.g.b ENSGT00940000157014 #37 Hominidae ANCESTRAL SPECIES 18 ENSGT00940000156928 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00910000147530 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.u #30 ENSGT00390000013771.v ENSGT00940000157601 #32 ENSGT00390000001804.cb.b.c.a #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000153675.a.a.b.e.a.g.b ENSGT00940000157014 #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES 16 ENSGT00940000156928 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00910000147530 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00950000183030.m.a.a.b.a.b.a.b ENSGT00940000154663.u #30 ENSGT00940000157601 #32 ENSGT00390000001804.cb.b.c.a #34 ENSGT00940000154258.a #33 ENSGT00940000163568 ENSGT00940000157014 #37 ENSGT00390000011067.A Homo/Pan group ANCESTRAL SPECIES 17 ENSGT00940000156928 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00950000183030.m.a.a.b.a.b.a.b ENSGT00940000154663.u #30 ENSGT00940000157601 #32 ENSGT00390000001804.cb.b.c.a #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000163568 ENSGT00940000157014 #37 ENSGT00390000011067.A Pan ANCESTRAL SPECIES 15 ENSGT00940000156928 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00950000183030.m.a.a.b.a.b.a.b ENSGT00940000154663.u #30 ENSGT00940000157601 #32 ENSGT00390000001804.cb.b.d #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000163568 ENSGT00940000157014 #37 ENSGT00390000011067.A Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 787 ENSPTRG00000049130 #22 ENSPTRG00000048154 #23 ENSPTRG00000046446 #24 ENSPTRG00000044260 #25 ENSPTRG00000048160 #26 ENSPTRG00000049551 #27 Chimpanzee MODERN SPECIES 11 DNMT3B (ENSPTRG00000013384) MAPRE1 (ENSPTRG00000013385) EFCAB8 (ENSPTRG00000034012) SUN5 (ENSPTRG00000024395) #7 BPIFB2 (ENSPTRG00000013387) #8 BPIFB6 (ENSPTRG00000013388) #9 BPIFB3 (ENSPTRG00000022778) #10 BPIFB4 (ENSPTRG00000013390) #11 BPIFA2 (ENSPTRG00000013391) #13 ENSPTRG00000049909 BPIFA3 (ENSPTRG00000013393) #15 BPIFA1 (ENSPTRG00000013395) #17 BPIFB1 (ENSPTRG00000013396) #18 CDK5RAP1 (ENSPTRG00000013399) #20 SNTA1 (ENSPTRG00000013400) #21 CBFA2T2 (ENSPTRG00000013401) #22 NECAB3 (ENSPTRG00000013402) #23 C20H20orf144 (ENSPTRG00000013403) #24 ENSPTRG00000047541 #25 E2F1 (ENSPTRG00000013404) #26 PXMP4 (ENSPTRG00000013405) #27 ZNF341 (ENSPTRG00000013406) #29 ENSPTRG00000045113 CHMP4B (ENSPTRG00000013408) #30 RALY (ENSPTRG00000013410) #32 EIF2S2 (ENSPTRG00000013412) #34 ENSPTRG00000045368 ENSPTRG00000046065 ASIP (ENSPTRG00000013413) #33 AHCY (ENSPTRG00000013414) #36 ITCH (ENSPTRG00000013415) #37 Bonobo MODERN SPECIES 11 DNMT3B (ENSPPAG00000034470) MAPRE1 (ENSPPAG00000025593) EFCAB8 (ENSPPAG00000043457) SUN5 (ENSPPAG00000029851) #7 BPIFB2 (ENSPPAG00000041501) #8 BPIFB6 (ENSPPAG00000019659) #9 BPIFB3 (ENSPPAG00000036747) #10 BPIFB4 (ENSPPAG00000042697) #11 BPIFA2 (ENSPPAG00000038731) #13 ENSPPAG00000041776 BPIFA3 (ENSPPAG00000011914) #15 BPIFA1 (ENSPPAG00000034693) #17 BPIFB1 (ENSPPAG00000029535) #18 CDK5RAP1 (ENSPPAG00000008989) #20 SNTA1 (ENSPPAG00000029137) #21 CBFA2T2 (ENSPPAG00000042396) #22 NECAB3 (ENSPPAG00000039394) #23 C20orf144 (ENSPPAG00000042847) #24 ACTL10 (ENSPPAG00000026624) #25 E2F1 (ENSPPAG00000025868) #26 PXMP4 (ENSPPAG00000028570) #27 ZNF341 (ENSPPAG00000037384) #29 ENSPPAG00000037596 CHMP4B (ENSPPAG00000028496) #30 RALY (ENSPPAG00000034951) #32 ENSPPAG00000043449 #34 ENSPPAG00000041611 ENSPPAG00000041601 ENSPPAG00000043799 ASIP (ENSPPAG00000031015) #33 AHCY (ENSPPAG00000037325) #36 Human MODERN SPECIES 12 COMMD7 (ENSG00000149600) DNMT3B (ENSG00000088305) MAPRE1 (ENSG00000101367) EFCAB8 (ENSG00000215529) SUN5 (ENSG00000167098) #7 BPIFB2 (ENSG00000078898) #8 BPIFB6 (ENSG00000167104) #9 BPIFB3 (ENSG00000186190) #10 BPIFB4 (ENSG00000186191) #11 BPIFA2 (ENSG00000131050) #13 BPIFA3 (ENSG00000131059) #15 BPIFA1 (ENSG00000198183) #17 BPIFB1 (ENSG00000125999) #18 CDK5RAP1 (ENSG00000101391) #20 SNTA1 (ENSG00000101400) #21 CBFA2T2 (ENSG00000078699) #22 NECAB3 (ENSG00000125967) #23 C20orf144 (ENSG00000149609) #24 ACTL10 (ENSG00000288649) #25 E2F1 (ENSG00000101412) #26 PXMP4 (ENSG00000101417) #27 ZNF341 (ENSG00000131061) #29 CHMP4B (ENSG00000101421) #30 RALY (ENSG00000125970) #32 EIF2S2 (ENSG00000125977) #34 ASIP (ENSG00000101440) #33 AHCY (ENSG00000101444) #36 ITCH (ENSG00000078747) #37 DYNLRB1 (ENSG00000125971) MAP1LC3A (ENSG00000101460) PIGU (ENSG00000101464) Gorilla DUPLICATION Gorilla MODERN SPECIES 22 SHOC1 (ENSGGOG00000000911) ENSGGOG00000010664 DNAJC25 (ENSGGOG00000012395) PTGR1 (ENSGGOG00000013334) ZNF483 (ENSGGOG00000011455) ECPAS (ENSGGOG00000012416) OR2K2 (ENSGGOG00000005175) LPAR1 (ENSGGOG00000001749) MUSK (ENSGGOG00000015657) SVEP1 (ENSGGOG00000004135) ENSGGOG00000027079 TXN (ENSGGOG00000006925) C9orf152 (ENSGGOG00000013066) PALM2-AKAP2 (ENSGGOG00000010137) ENSGGOG00000026428 ENSGGOG00000040506 #22 ENSGGOG00000040883 ENSGGOG00000023840 PTPN3 (ENSGGOG00000024081) EPB41L4B (ENSGGOG00000004192) FRRS1L (ENSGGOG00000009128) TMEM245 (ENSGGOG00000001950) CTNNAL1 (ENSGGOG00000004228) ABITRAM (ENSGGOG00000004222) ELP1 (ENSGGOG00000004204) ACTL7A (ENSGGOG00000025495) ACTL7B (ENSGGOG00000008278) KLF4 (ENSGGOG00000000096) RAD23B (ENSGGOG00000002511) ENSGGOG00000042705 ZNF462 (ENSGGOG00000008882) Gorilla MODERN SPECIES 11 DNMT3B (ENSGGOG00000009533) ENSGGOG00000022496 EFCAB8 (ENSGGOG00000000152) SUN5 (ENSGGOG00000008288) #7 BPIFB2 (ENSGGOG00000010625) #8 BPIFB6 (ENSGGOG00000010638) #9 BPIFB3 (ENSGGOG00000010657) #10 BPIFB4 (ENSGGOG00000011742) #11 BPIFA2 (ENSGGOG00000017162) #13 ENSGGOG00000017163 BPIFA3 (ENSGGOG00000023198) #15 BPIFA1 (ENSGGOG00000027809) #17 BPIFB1 (ENSGGOG00000003242) #18 ENSGGOG00000003253 #20 SNTA1 (ENSGGOG00000008508) #21 ENSGGOG00000003578 #22 ENSGGOG00000043692 NECAB3 (ENSGGOG00000003584) #23 C20orf144 (ENSGGOG00000038124) #24 ACTL10 (ENSGGOG00000042107) #25 E2F1 (ENSGGOG00000003588) #26 PXMP4 (ENSGGOG00000044115) #27 ZNF341 (ENSGGOG00000015775) #29 ENSGGOG00000025590 CHMP4B (ENSGGOG00000007775) #30 RALY (ENSGGOG00000022709) #32 ENSGGOG00000015546 #34 ENSGGOG00000027170 ASIP (ENSGGOG00000026572) #33 ENSGGOG00000040622 AHCY (ENSGGOG00000014694) #36 Orangutan MODERN SPECIES 11 DNMT3B (ENSPPYG00000010911) MAPRE1 (ENSPPYG00000032390) ENSPPYG00000035142 EFCAB8 (ENSPPYG00000032398) SUN5 (ENSPPYG00000010914) #7 BPIFB2 (ENSPPYG00000011278) #8 BPIFB6 (ENSPPYG00000011279) #9 BPIFB3 (ENSPPYG00000011280) #10 ENSPPYG00000011281 #11 BPIFA2 (ENSPPYG00000010915) #13 BPIFA3 (ENSPPYG00000010917) #15 BPIFA1 (ENSPPYG00000010918) #17 BPIFB1 (ENSPPYG00000010919) #18 CDK5RAP1 (ENSPPYG00000010923) #20 SNTA1 (ENSPPYG00000010924) #21 CBFA2T2 (ENSPPYG00000010925) #22 NECAB3 (ENSPPYG00000010926) #23 C20orf144 (ENSPPYG00000010927) #24 ACTL10 (ENSPPYG00000010928) #25 E2F1 (ENSPPYG00000010929) #26 PXMP4 (ENSPPYG00000041080) #27 ZNF341 (ENSPPYG00000010930) #29 CHMP4B (ENSPPYG00000010931) #30 ENSPPYG00000041388 ENSPPYG00000010932 #32 EIF2S2 (ENSPPYG00000010933) #34 ENSPPYG00000010934 #33 AHCY (ENSPPYG00000010935) #36 ITCH (ENSPPYG00000010936) #37 ENSPPYG00000010937 ENSPPYG00000010938 Gibbon MODERN SPECIES 3 ENSNLEG00000033204 DNMT3B (ENSNLEG00000009819) MAPRE1 (ENSNLEG00000009828) SUN5 (ENSNLEG00000009839) #7 BPIFB2 (ENSNLEG00000009854) #8 BPIFB6 (ENSNLEG00000009863) #9 BPIFB3 (ENSNLEG00000009874) #10 BPIFB4 (ENSNLEG00000009889) #11 BPIFA2 (ENSNLEG00000009895) #13 ENSNLEG00000032607 BPIFA3 (ENSNLEG00000009907) #15 ENSNLEG00000009915 #17 BPIFB1 (ENSNLEG00000009918) #18 CDK5RAP1 (ENSNLEG00000009942) #20 SNTA1 (ENSNLEG00000009970) #21 CBFA2T2 (ENSNLEG00000009976) #22 C20orf144 (ENSNLEG00000010006) #24 ENSNLEG00000009989 #23 E2F1 (ENSNLEG00000010009) #26 ENSNLEG00000029978 #27 ZNF341 (ENSNLEG00000010013) #29 CHMP4B (ENSNLEG00000010020) #30 ENSNLEG00000035552 ENSNLEG00000010031 #32 EIF2S2 (ENSNLEG00000010034) #34 ENSNLEG00000028939 ENSNLEG00000010041 #36 ENSNLEG00000030506 ITCH (ENSNLEG00000010045) #37 ENSNLEG00000010082 MAP1LC3A (ENSNLEG00000010086) Cercopithecidae ANCESTRAL SPECIES 16 ENSGT00940000156928 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00910000147530 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.u #30 ENSGT00390000013771.v ENSGT00940000157601 #32 ENSGT00390000001804.cb.b.a.b #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000153675.a.a.b.e.a.g.b ENSGT00940000157014 #37 Cercopithecinae ANCESTRAL SPECIES 19 ENSGT00940000156928 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00910000147530 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.u #30 ENSGT00390000013771.v ENSGT00940000157601 #32 ENSGT00390000001804.cb.b.a.b #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000153675.a.a.b.e.a.g.b ENSGT00940000157014 #37 Cercopithecinae_a ANCESTRAL SPECIES 18 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00390000018318.u.b.a.a.n.b ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00910000147530 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.u #30 ENSGT00390000013771.v ENSGT00940000157601 #32 ENSGT00390000001804.cb.b.a.a #34 ENSGT00910000147823 ENSGT00390000001804.cb.b.a.b #34 ENSGT00940000153095.g.b.a.b.o ENSGT00390000007890.c.a Cercopithecinae_b ANCESTRAL SPECIES 12 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00390000018318.u.b.a.a.n.b ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00910000147530 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.u #30 ENSGT00390000013771.v ENSGT00940000157601 #32 ENSGT00910000147823 ENSGT00390000001804.cb.b.a.b #34 ENSGT00940000153095.g.b.a.b.o ENSGT00390000007890.c.a ENSGT00940000154258.a #33 Cercopithecinae_d ANCESTRAL SPECIES 2 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00390000018318.u.b.a.a.n.b ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00910000147530 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.u #30 ENSGT00390000013771.v ENSGT00940000157601 #32 ENSGT00910000147823 ENSGT00390000001804.cb.b.a.b #34 ENSGT00940000153095.g.b.a.b.o ENSGT00390000007890.c.a ENSGT00940000154258.a #33 Drill MODERN SPECIES 1448 CDK5RAP1 (ENSMLEG00000029036) #20 SNTA1 (ENSMLEG00000040271) #21 CBFA2T2 (ENSMLEG00000042497) #22 ENSMLEG00000010723 NECAB3 (ENSMLEG00000041816) #23 C20orf144 (ENSMLEG00000044204) #24 ACTL10 (ENSMLEG00000008960) #25 E2F1 (ENSMLEG00000004422) #26 PXMP4 (ENSMLEG00000032170) #27 ZNF341 (ENSMLEG00000031946) #29 CHMP4B (ENSMLEG00000033156) #30 ENSMLEG00000000187 RALY (ENSMLEG00000028900) #32 ENSMLEG00000004937 EIF2S2 (ENSMLEG00000039854) #34 ENSMLEG00000033651 Sooty mangabey MODERN SPECIES 602 MAPRE1 (ENSCATG00000041722) EFCAB8 (ENSCATG00000043154) ENSCATG00000038780 SUN5 (ENSCATG00000030423) #7 BPIFB2 (ENSCATG00000035818) #8 BPIFB6 (ENSCATG00000032216) #9 BPIFB3 (ENSCATG00000043728) #10 BPIFB4 (ENSCATG00000008536) #11 BPIFA2 (ENSCATG00000042233) #13 ENSCATG00000029740 BPIFA3 (ENSCATG00000041213) #15 BPIFA1 (ENSCATG00000042760) #17 BPIFB1 (ENSCATG00000026260) #18 CDK5RAP1 (ENSCATG00000039579) #20 SNTA1 (ENSCATG00000044322) #21 CBFA2T2 (ENSCATG00000006176) #22 ENSCATG00000022295 NECAB3 (ENSCATG00000034703) #23 C20orf144 (ENSCATG00000044672) #24 ACTL10 (ENSCATG00000022465) #25 E2F1 (ENSCATG00000039419) #26 PXMP4 (ENSCATG00000044653) #27 ZNF341 (ENSCATG00000011236) #29 CHMP4B (ENSCATG00000044221) #30 ENSCATG00000032333 RALY (ENSCATG00000031769) #32 ENSCATG00000022568 ENSCATG00000044082 #34 ENSCATG00000044570 ENSCATG00000039901 ASIP (ENSCATG00000031477) #33 Olive baboon MODERN SPECIES 7 C20orf203 (ENSPANG00000050681) COMMD7 (ENSPANG00000001132) DNMT3B (ENSPANG00000013451) MAPRE1 (ENSPANG00000016611) EFCAB8 (ENSPANG00000023852) ENSPANG00000024494 #7 BPIFB2 (ENSPANG00000019996) #8 BPIFB6 (ENSPANG00000009734) #9 BPIFB3 (ENSPANG00000020552) #10 BPIFB4 (ENSPANG00000022709) #11 BPIFA2 (ENSPANG00000024266) #13 BPIFA3 (ENSPANG00000021778) #15 BPIFA1 (ENSPANG00000024267) #17 BPIFB1 (ENSPANG00000017512) #18 CDK5RAP1 (ENSPANG00000025545) #20 CBFA2T2 (ENSPANG00000022710) #22 NECAB3 (ENSPANG00000025546) #23 C20orf144 (ENSPANG00000017513) #24 ACTL10 (ENSPANG00000004544) #25 E2F1 (ENSPANG00000006985) #26 PXMP4 (ENSPANG00000016747) #27 ZNF341 (ENSPANG00000018096) #29 CHMP4B (ENSPANG00000018095) #30 ENSPANG00000018093 #32 ENSPANG00000048492 #34 ASIP (ENSPANG00000022711) #33 AHCY (ENSPANG00000026274) #36 ITCH (ENSPANG00000009940) #37 DYNLRB1 (ENSPANG00000009941) MAP1LC3A (ENSPANG00000014240) NCOA6 (ENSPANG00000017422) Macaca ANCESTRAL SPECIES 16 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00390000018318.u.b.a.a.n.b ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.b ##19 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00910000147530 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.u #30 ENSGT00390000013771.v ENSGT00940000157601 #32 ENSGT00390000001804.cb.b.a.a #34 ENSGT00910000147823 ENSGT00390000001804.cb.b.a.b #34 ENSGT00940000153095.g.b.a.b.o ENSGT00390000007890.c.a Pig-tailed macaque MODERN SPECIES 232 MAPRE1 (ENSMNEG00000039307) EFCAB8 (ENSMNEG00000035540) ENSMNEG00000036815 SUN5 (ENSMNEG00000033611) #7 BPIFB2 (ENSMNEG00000029774) #8 BPIFB6 (ENSMNEG00000035018) #9 BPIFB3 (ENSMNEG00000038601) #10 BPIFB4 (ENSMNEG00000043965) #11 BPIFA2 (ENSMNEG00000042823) #13 ENSMNEG00000028931 ##19 BPIFA3 (ENSMNEG00000005575) #15 BPIFA1 (ENSMNEG00000044088) #17 BPIFB1 (ENSMNEG00000043489) #18 CDK5RAP1 (ENSMNEG00000045565) #20 SNTA1 (ENSMNEG00000038405) #21 CBFA2T2 (ENSMNEG00000034428) #22 NECAB3 (ENSMNEG00000040091) #23 C20orf144 (ENSMNEG00000045111) #24 ACTL10 (ENSMNEG00000026090) #25 E2F1 (ENSMNEG00000027050) #26 PXMP4 (ENSMNEG00000010793) #27 ZNF341 (ENSMNEG00000034107) #29 CHMP4B (ENSMNEG00000032657) #30 ENSMNEG00000039504 RALY (ENSMNEG00000044988) #32 ENSMNEG00000018000 EIF2S2 (ENSMNEG00000029852) #34 ENSMNEG00000044539 ENSMNEG00000029730 ASIP (ENSMNEG00000040686) #33 ENSMNEG00000030944 Macaca_a ANCESTRAL SPECIES 18 ENSGT00390000018318.u.b.a.a.n.b ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.b ##19 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00940000161627.a.a.a.a.b.a.a.a.a.b.b.b.b.b ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.b.a.a.b.b.a.a.a.b.a.a.b.a ENSGT00950000183176.a #22 ENSGT00910000147530 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000159472 #26 ENSGT01100000263539.b.b.b.a.a.a.b ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.u #30 ENSGT00940000157601 #32 ENSGT00390000001804.cb.b.a.a #34 ENSGT00940000153095.g.b.a.b.o ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A Crab-eating macaque MODERN SPECIES 1 EFCAB8 (ENSMFAG00000006242) SUN5 (ENSMFAG00000035909) #7 BPIFB2 (ENSMFAG00000040564) #8 BPIFB6 (ENSMFAG00000036761) #9 BPIFB3 (ENSMFAG00000042929) #10 BPIFB4 (ENSMFAG00000030797) #11 BPIFA2 (ENSMFAG00000032051) #13 BPIFA3 (ENSMFAG00000002677) #15 BPIFA1 (ENSMFAG00000041209) #17 BPIFB1 (ENSMFAG00000036542) #18 CDK5RAP1 (ENSMFAG00000040526) #20 SNTA1 (ENSMFAG00000039231) #21 ENSMFAG00000053042 ENSMFAG00000047567 ENSMFAG00000051247 CBFA2T2 (ENSMFAG00000000820) #22 ENSMFAG00000050553 NECAB3 (ENSMFAG00000035873) #23 C20orf144 (ENSMFAG00000038184) #24 E2F1 (ENSMFAG00000042416) #26 ENSMFAG00000047376 ENSMFAG00000039376 #27 ENSMFAG00000045920 #29 CHMP4B (ENSMFAG00000040050) #30 ENSMFAG00000051093 ENSMFAG00000050321 RALY (ENSMFAG00000033131) #32 EIF2S2 (ENSMFAG00000037155) #34 AHCY (ENSMFAG00000031669) #36 ITCH (ENSMFAG00000041734) #37 ENSMFAG00000055213 Rhesus MODERN SPECIES 1 EFCAB8 (ENSMMUG00000037750) ENSMMUG00000046729 SUN5 (ENSMMUG00000009414) #7 BPIFB2 (ENSMMUG00000053133) #8 BPIFB6 (ENSMMUG00000020669) #9 BPIFB3 (ENSMMUG00000020671) #10 BPIFB4 (ENSMMUG00000020676) #11 BPIFA2 (ENSMMUG00000059440) #13 BPIFA4 (ENSMMUG00000042013) ##19 BPIFA3 (ENSMMUG00000008928) #15 BPIFA1 (ENSMMUG00000008925) #17 BPIFB1 (ENSMMUG00000062078) #18 CDK5RAP1 (ENSMMUG00000008470) #20 ENSMMUG00000050166 ENSMMUG00000055776 CBFA2T2 (ENSMMUG00000023541) #22 ENSMMUG00000063982 ENSMMUG00000052335 NECAB3 (ENSMMUG00000023543) #23 C10H20orf144 (ENSMMUG00000023548) #24 E2F1 (ENSMMUG00000023550) #26 ENSMMUG00000064963 PXMP4 (ENSMMUG00000023551) #27 ZNF341 (ENSMMUG00000021492) #29 CHMP4B (ENSMMUG00000008084) #30 RALY (ENSMMUG00000018093) #32 EIF2S2 (ENSMMUG00000018095) #34 ENSMMUG00000056046 ASIP (ENSMMUG00000061171) #33 AHCY (ENSMMUG00000016306) #36 ITCH (ENSMMUG00000012912) #37 Vervet Monkey MODERN SPECIES 11 COMMD7 (ENSCSAG00000012589) DNMT3B (ENSCSAG00000012573) MAPRE1 (ENSCSAG00000012529) ENSCSAG00000012522 SUN5 (ENSCSAG00000012504) #7 BPIFB2 (ENSCSAG00000012461) #8 BPIFB6 (ENSCSAG00000012441) #9 BPIFB3 (ENSCSAG00000012411) #10 BPIFB4 (ENSCSAG00000012383) #11 BPIFA2 (ENSCSAG00000012361) #13 BPIFA3 (ENSCSAG00000012337) #15 BPIFA1 (ENSCSAG00000012315) #17 BPIFB1 (ENSCSAG00000012293) #18 CDK5RAP1 (ENSCSAG00000012289) #20 SNTA1 (ENSCSAG00000012284) #21 CBFA2T2 (ENSCSAG00000012281) #22 NECAB3 (ENSCSAG00000012279) #23 C20orf144 (ENSCSAG00000012277) #24 ACTL10 (ENSCSAG00000018668) #25 E2F1 (ENSCSAG00000012265) #26 PXMP4 (ENSCSAG00000012247) #27 ZNF341 (ENSCSAG00000012235) #29 CHMP4B (ENSCSAG00000012213) #30 RALY (ENSCSAG00000012199) #32 EIF2S2 (ENSCSAG00000012138) #34 ASIP (ENSCSAG00000012125) #33 AHCY (ENSCSAG00000012115) #36 ITCH (ENSCSAG00000012102) #37 DYNLRB1 (ENSCSAG00000012088) MAP1LC3A (ENSCSAG00000012080) PIGU (ENSCSAG00000012058) Rhinopithecus ANCESTRAL SPECIES 28 ENSGT00940000156928.a ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.u #30 ENSGT00390000013771.v ENSGT00940000157601 #32 ENSGT00390000001804.cb.b.a.b.d #34 ENSGT00390000001804.cb.b.b #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Black snub-nosed monkey MODERN SPECIES 75 ENSRBIG00000027967 SLC23A2 (ENSRBIG00000027789) RASSF2 (ENSRBIG00000013928) PRND (ENSRBIG00000033646) PRNP (ENSRBIG00000003130) ENSRBIG00000027395 ADRA1D (ENSRBIG00000028900) ENSRBIG00000032026 SMOX (ENSRBIG00000036982) ENSRBIG00000033843 RNF24 (ENSRBIG00000021788) PANK2 (ENSRBIG00000028866) MAVS (ENSRBIG00000033881) AP5S1 (ENSRBIG00000032481) CDC25B (ENSRBIG00000034530) CBFA2T2 (ENSRBIG00000043649) #22 NECAB3 (ENSRBIG00000026105) #23 C20orf144 (ENSRBIG00000034520) #24 ACTL10 (ENSRBIG00000030364) #25 E2F1 (ENSRBIG00000033055) #26 PXMP4 (ENSRBIG00000028626) #27 ZNF341 (ENSRBIG00000034139) #29 CHMP4B (ENSRBIG00000043046) #30 ENSRBIG00000033900 RALY (ENSRBIG00000030203) #32 ENSRBIG00000042624 #34 ASIP (ENSRBIG00000039743) #33 ENSRBIG00000032079 ENSRBIG00000034932 AHCY (ENSRBIG00000027979) #36 ITCH (ENSRBIG00000035908) #37 Golden snub-nosed monkey MODERN SPECIES 896 SUN5 (ENSRROG00000043627) #7 BPIFB2 (ENSRROG00000041108) #8 BPIFB6 (ENSRROG00000030178) #9 BPIFB3 (ENSRROG00000040199) #10 BPIFB4 (ENSRROG00000043803) #11 BPIFA2 (ENSRROG00000038035) #13 ENSRROG00000045498 BPIFA3 (ENSRROG00000041448) #15 BPIFA1 (ENSRROG00000029579) #17 BPIFB1 (ENSRROG00000034793) #18 CDK5RAP1 (ENSRROG00000037532) #20 SNTA1 (ENSRROG00000042592) #21 CBFA2T2 (ENSRROG00000035361) #22 C20orf144 (ENSRROG00000044990) #24 ACTL10 (ENSRROG00000009546) #25 NECAB3 (ENSRROG00000010016) #23 E2F1 (ENSRROG00000039358) #26 PXMP4 (ENSRROG00000033853) #27 ZNF341 (ENSRROG00000032773) #29 CHMP4B (ENSRROG00000029883) #30 ENSRROG00000039774 Platyrrhini ANCESTRAL SPECIES 11 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804.cb.a #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a.dc.b #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Cebidae ANCESTRAL SPECIES 13 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804.cb.a.c #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a.dc.b #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Cebidae_a ANCESTRAL SPECIES 2 ENSGT00940000156928 ENSGT00490000043329.a.a.a ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804.cb.a.c #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a.dc.b #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00930000150941.x.a.b.a Capuchin MODERN SPECIES 18 EFCAB8 (ENSCCAG00000022910) SUN5 (ENSCCAG00000034764) #7 BPIFB2 (ENSCCAG00000030652) #8 BPIFB6 (ENSCCAG00000030049) #9 BPIFB3 (ENSCCAG00000022192) #10 BPIFB4 (ENSCCAG00000027553) #11 BPIFA2 (ENSCCAG00000021755) #13 ENSCCAG00000034919 ##19 BPIFA3 (ENSCCAG00000022344) #15 BPIFA1 (ENSCCAG00000021907) #17 BPIFB1 (ENSCCAG00000015758) #18 CDK5RAP1 (ENSCCAG00000031228) #20 SNTA1 (ENSCCAG00000037245) #21 ENSCCAG00000023290 ENSCCAG00000020608 CBFA2T2 (ENSCCAG00000030202) #22 C20orf144 (ENSCCAG00000001393) #24 ACTL10 (ENSCCAG00000020021) #25 NECAB3 (ENSCCAG00000025337) #23 E2F1 (ENSCCAG00000031862) #26 PXMP4 (ENSCCAG00000023929) #27 ZNF341 (ENSCCAG00000022663) #29 CHMP4B (ENSCCAG00000035412) #30 RALY (ENSCCAG00000024548) #32 ENSCCAG00000035446 #34 ASIP (ENSCCAG00000034213) #33 ENSCCAG00000036415 #36 ITCH (ENSCCAG00000036090) #37 ENSCCAG00000026601 MAP1LC3A (ENSCCAG00000026883) ENSCCAG00000018006 Bolivian squirrel monkey MODERN SPECIES 89 DNMT3B (ENSSBOG00000030711) MAPRE1 (ENSSBOG00000026959) EFCAB8 (ENSSBOG00000035195) SUN5 (ENSSBOG00000036230) #7 BPIFB2 (ENSSBOG00000023467) #8 BPIFB6 (ENSSBOG00000015194) #9 BPIFB3 (ENSSBOG00000035285) #10 BPIFB4 (ENSSBOG00000034867) #11 BPIFA2 (ENSSBOG00000031635) #13 ENSSBOG00000035555 BPIFA3 (ENSSBOG00000031059) #15 BPIFA1 (ENSSBOG00000033533) #17 BPIFB1 (ENSSBOG00000023508) #18 CDK5RAP1 (ENSSBOG00000034885) #20 SNTA1 (ENSSBOG00000020201) #21 CBFA2T2 (ENSSBOG00000029834) #22 C20orf144 (ENSSBOG00000026299) #24 ACTL10 (ENSSBOG00000004671) #25 NECAB3 (ENSSBOG00000036045) #23 E2F1 (ENSSBOG00000028962) #26 PXMP4 (ENSSBOG00000005223) #27 ZNF341 (ENSSBOG00000026329) #29 CHMP4B (ENSSBOG00000030524) #30 RALY (ENSSBOG00000001418) #32 ENSSBOG00000020845 #34 ENSSBOG00000035159 AHCY (ENSSBOG00000018930) #36 ITCH (ENSSBOG00000028570) #37 ENSSBOG00000034562 MAP1LC3A (ENSSBOG00000027529) ENSSBOG00000036011 Marmoset MODERN SPECIES 17 ENSCJAG00000015601 EFCAB8 (ENSCJAG00000083357) SUN5 (ENSCJAG00000018611) #7 BPIFB2 (ENSCJAG00000018598) #8 BPIFB6 (ENSCJAG00000018589) #9 BPIFB3 (ENSCJAG00000018580) #10 BPIFB4 (ENSCJAG00000034914) #11 BPIFA2 (ENSCJAG00000018544) #13 BPIFA3 (ENSCJAG00000018565) #15 BPIFA1 (ENSCJAG00000018547) #17 BPIFB1 (ENSCJAG00000018531) #18 ENSCJAG00000074490 CDK5RAP1 (ENSCJAG00000018500) #20 SNTA1 (ENSCJAG00000046751) #21 ENSCJAG00000071493 CBFA2T2 (ENSCJAG00000018475) #22 ACTL10 (ENSCJAG00000058257) #25 NECAB3 (ENSCJAG00000018455) #23 E2F1 (ENSCJAG00000018451) #26 PXMP4 (ENSCJAG00000080526) #27 ZNF341 (ENSCJAG00000018423) #29 CHMP4B (ENSCJAG00000018397) #30 ENSCJAG00000018361 #32 ENSCJAG00000018334 #34 ASIP (ENSCJAG00000018327) #33 AHCY (ENSCJAG00000018303) #36 ENSCJAG00000084324 ENSCJAG00000047561 ITCH (ENSCJAG00000018204) #37 ENSCJAG00000079373 MAP1LC3A (ENSCJAG00000045544) Mas night monkey MODERN SPECIES 1017 MAPRE1 (ENSANAG00000035566) EFCAB8 (ENSANAG00000029449) SUN5 (ENSANAG00000026404) #7 BPIFB2 (ENSANAG00000023925) #8 BPIFB6 (ENSANAG00000034061) #9 BPIFB3 (ENSANAG00000005106) #10 BPIFB4 (ENSANAG00000021575) #11 BPIFA2 (ENSANAG00000020124) #13 ENSANAG00000026946 BPIFA3 (ENSANAG00000029660) #15 BPIFA1 (ENSANAG00000023955) #17 BPIFB1 (ENSANAG00000024111) #18 CDK5RAP1 (ENSANAG00000036607) #20 SNTA1 (ENSANAG00000021276) #21 ENSANAG00000022327 CBFA2T2 (ENSANAG00000029831) #22 NECAB3 (ENSANAG00000024109) #23 C20orf144 (ENSANAG00000028577) #24 E2F1 (ENSANAG00000029428) #26 PXMP4 (ENSANAG00000031512) #27 ZNF341 (ENSANAG00000023240) #29 CHMP4B (ENSANAG00000023014) #30 RALY (ENSANAG00000019376) #32 ENSANAG00000022839 #34 ASIP (ENSANAG00000030668) #33 ENSANAG00000033573 #36 ENSANAG00000014301 ITCH (ENSANAG00000027856) #37 ENSANAG00000023825 MAP1LC3A (ENSANAG00000022249) PIGU (ENSANAG00000035852) Tarsier MODERN SPECIES 5322 EPHB1 (ENSTSYG00000000897) ENSTSYG00000031041 #22 Laurasiatheria ANCESTRAL SPECIES 17 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183176.a #22 Hedgehog MODERN SPECIES 8655 CBFA2T2 (ENSEEUG00000007911) #22 Common shrew MODERN SPECIES 6609 CBFA2T2 (ENSSARG00000001355) #22 Laurasiatheria_a ANCESTRAL SPECIES 18 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Laurasiatheria_b ANCESTRAL SPECIES 19 ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Carnivora ANCESTRAL SPECIES 20 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Caniformia ANCESTRAL SPECIES ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Caniformia_b ANCESTRAL SPECIES ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Ursidae ANCESTRAL SPECIES 14 ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000170884 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.j #30 ENSGT00940000157601 #32 ENSGT00390000001804.b #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Ursus ANCESTRAL SPECIES 1 ENSGT00940000156928 ENSGT00490000043329.a.a.a.ob.b ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.j #30 ENSGT00940000157601 #32 ENSGT00390000001804.b #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Polar bear MODERN SPECIES 253 ASXL1 (ENSUMAG00000024178) NOL4L (ENSUMAG00000024177) COMMD7 (ENSUMAG00000024175) DNMT3B (ENSUMAG00000024174) MAPRE1 (ENSUMAG00000024172) EFCAB8 (ENSUMAG00000024168) BPIFB2 (ENSUMAG00000024164) #8 BPIFB6 (ENSUMAG00000024161) #9 BPIFB4 (ENSUMAG00000024159) #11 ENSUMAG00000024158 #13 ENSUMAG00000024157 BPIFA3 (ENSUMAG00000024153) #15 BPIFA1 (ENSUMAG00000024148) #17 BPIFB1 (ENSUMAG00000024143) #18 CDK5RAP1 (ENSUMAG00000024117) #20 CBFA2T2 (ENSUMAG00000024115) #22 ACTL10 (ENSUMAG00000024114) #25 NECAB3 (ENSUMAG00000024113) #23 E2F1 (ENSUMAG00000024112) #26 PXMP4 (ENSUMAG00000024110) #27 ZNF341 (ENSUMAG00000024108) #29 CHMP4B (ENSUMAG00000024107) #30 RALY (ENSUMAG00000024106) #32 EIF2S2 (ENSUMAG00000024105) #34 American black bear MODERN SPECIES 3196 CBFA2T2 (ENSUAMG00000026308) #22 ENSUAMG00000026312 #23 ENSUAMG00000026314 #24 ACTL10 (ENSUAMG00000026315) #25 E2F1 (ENSUAMG00000026316) #26 Giant Panda MODERN SPECIES 4 MAPRE1 (ENSAMEG00000013238) ENSAMEG00000024835 SUN5 (ENSAMEG00000013221) #7 BPIFB2 (ENSAMEG00000013181) #8 BPIFB6 (ENSAMEG00000013170) #9 BPIFB3 (ENSAMEG00000013151) #10 BPIFB4 (ENSAMEG00000013134) #11 ENSAMEG00000013119 #13 ENSAMEG00000013108 BPIFA3 (ENSAMEG00000013101) #15 BPIFA1 (ENSAMEG00000013090) #17 BPIFB1 (ENSAMEG00000013065) #18 ENSAMEG00000013060 CDK5RAP1 (ENSAMEG00000013021) #20 SNTA1 (ENSAMEG00000012992) #21 CBFA2T2 (ENSAMEG00000008925) #22 ENSAMEG00000019179 #24 ACTL10 (ENSAMEG00000008990) #25 ENSAMEG00000008958 #23 ENSAMEG00000009004 #27 ZNF341 (ENSAMEG00000009012) #29 CHMP4B (ENSAMEG00000009038) #30 RALY (ENSAMEG00000009050) #32 EIF2S2 (ENSAMEG00000009071) #34 ASIP (ENSAMEG00000009091) #33 AHCY (ENSAMEG00000009105) #36 ITCH (ENSAMEG00000009134) #37 ENSAMEG00000009179 MAP1LC3A (ENSAMEG00000009183) PIGU (ENSAMEG00000009187) TP53INP2 (ENSAMEG00000009209) Mustelinae ANCESTRAL SPECIES 11 ENSGT00930000151259 ENSGT00390000007560.q.a.d ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 American mink MODERN SPECIES 17 MAPRE1 (ENSNVIG00000018328) ENSNVIG00000018325 ENSNVIG00000018321 SUN5 (ENSNVIG00000018291) #7 BPIFB2 (ENSNVIG00000018261) #8 BPIFB6 (ENSNVIG00000018242) #9 BPIFB3 (ENSNVIG00000018227) #10 BPIFB4 (ENSNVIG00000018205) #11 ENSNVIG00000018194 BPIFA3 (ENSNVIG00000018144) #15 BPIFA1 (ENSNVIG00000018087) #17 BPIFB1 (ENSNVIG00000018051) #18 ENSNVIG00000018027 #19 CDK5RAP1 (ENSNVIG00000017990) #20 SNTA1 (ENSNVIG00000017966) #21 CBFA2T2 (ENSNVIG00000017905) #22 ENSNVIG00000017895 #24 ACTL10 (ENSNVIG00000017892) #25 NECAB3 (ENSNVIG00000017859) #23 E2F1 (ENSNVIG00000017832) #26 PXMP4 (ENSNVIG00000017800) #27 ZNF341 (ENSNVIG00000017752) #29 CHMP4B (ENSNVIG00000017728) #30 RALY (ENSNVIG00000017666) #32 EIF2S2 (ENSNVIG00000017647) #34 ASIP (ENSNVIG00000017624) #33 AHCY (ENSNVIG00000017607) #36 ITCH (ENSNVIG00000017551) #37 ENSNVIG00000017524 MAP1LC3A (ENSNVIG00000017515) PIGU (ENSNVIG00000017474) Ferret MODERN SPECIES 180 ENSMPUG00000017862 BPIFB3 (ENSMPUG00000017861) #10 ENSMPUG00000017860 BPIFB4 (ENSMPUG00000017858) #11 ENSMPUG00000017857 #12 ENSMPUG00000017856 #13 BPIFA3 (ENSMPUG00000017855) #15 BPIFA1 (ENSMPUG00000017848) #17 BPIFB1 (ENSMPUG00000017841) #18 ENSMPUG00000017839 ENSMPUG00000017838 ENSMPUG00000017837 #20 ENSMPUG00000017836 #20 ENSMPUG00000017835 #20 SNTA1 (ENSMPUG00000017832) #21 CBFA2T2 (ENSMPUG00000017831) #22 ENSMPUG00000017829 #24 NECAB3 (ENSMPUG00000017825) #23 E2F1 (ENSMPUG00000017824) #26 PXMP4 (ENSMPUG00000017823) #27 ZNF341 (ENSMPUG00000017822) #29 CHMP4B (ENSMPUG00000017821) #30 RALY (ENSMPUG00000017820) #32 EIF2S2 (ENSMPUG00000017819) #34 ASIP (ENSMPUG00000017818) #33 AHCY (ENSMPUG00000017817) #36 ITCH (ENSMPUG00000017816) #37 DYNLRB1 (ENSMPUG00000017815) MAP1LC3A (ENSMPUG00000017814) PIGU (ENSMPUG00000017813) TP53INP2 (ENSMPUG00000017812) Canidae ANCESTRAL SPECIES 19 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.a ##19 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Canis_lupus ANCESTRAL SPECIES 13 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.a ##19 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00940000154661.a.a ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00390000017515.o.a ENSGT00940000157014 #37 ENSGT00390000011067.A.jb Dingo MODERN SPECIES 343 ENSCAFG00020004771 EFCAB8 (ENSCAFG00020004774) SUN5 (ENSCAFG00020004779) #7 BPIFB2 (ENSCAFG00020004786) #8 BPIFB6 (ENSCAFG00020004797) #9 BPIFB3 (ENSCAFG00020004800) #10 BPIFB4 (ENSCAFG00020004810) #11 ENSCAFG00020004841 #13 ENSCAFG00020004846 BPIFA3 (ENSCAFG00020004853) #15 BPIFA1 (ENSCAFG00020004859) #17 BPIFB1 (ENSCAFG00020004882) #18 ENSCAFG00020004889 #19 CDK5RAP1 (ENSCAFG00020004901) #20 SNTA1 (ENSCAFG00020004908) #21 CBFA2T2 (ENSCAFG00020004923) #22 NECAB3 (ENSCAFG00020004926) #23 ENSCAFG00020004963 #24 ACTL10 (ENSCAFG00020004965) #25 E2F1 (ENSCAFG00020004968) #26 PXMP4 (ENSCAFG00020004976) #27 ENSCAFG00020004983 ZNF341 (ENSCAFG00020004998) #29 CHMP4B (ENSCAFG00020005042) #30 ENSCAFG00020005046 RALY (ENSCAFG00020005069) #32 EIF2S2 (ENSCAFG00020005078) #34 ASIP (ENSCAFG00020005092) #33 ENSCAFG00020005093 ITCH (ENSCAFG00020005109) #37 ENSCAFG00020005131 Dog MODERN SPECIES 16 SUN5 (ENSCAFG00845022906) #7 BPIFB2 (ENSCAFG00845022982) #8 BPIFB6 (ENSCAFG00845023097) #9 BPIFB3 (ENSCAFG00845023196) #10 BPIFB4 (ENSCAFG00845023291) #11 ENSCAFG00845023399 ##19 BPIFA2 (ENSCAFG00845023488) #13 ENSCAFG00845023553 BPIFA3 (ENSCAFG00845023594) #15 BPIFA1 (ENSCAFG00845023690) #17 BPIFB1 (ENSCAFG00845023875) #18 ENSCAFG00845024007 #19 ENSCAFG00845024074 CDK5RAP1 (ENSCAFG00845024161) #20 CDK5RAP1 (ENSCAFG00845024407) #21 CBFA2T2 (ENSCAFG00845024493) #22 NECAB3 (ENSCAFG00845024784) #23 ENSCAFG00845025080 #24 ENSCAFG00845025127 #25 E2F1 (ENSCAFG00845025182) #26 TIMM8A (ENSCAFG00845025368) ZNF341 (ENSCAFG00845025407) #29 CHMP4B (ENSCAFG00845025558) #30 RALY (ENSCAFG00845025648) #32 EIF2S2 (ENSCAFG00845025914) #34 ASIP (ENSCAFG00845015715) #33 ENSCAFG00845015756 #36 ENSCAFG00845015788 ITCH (ENSCAFG00845015881) #37 DYNLRB1 (ENSCAFG00845016154) PIGU (ENSCAFG00845016278) Red fox MODERN SPECIES 79 DNMT3B (ENSVVUG00000005117) EFCAB8 (ENSVVUG00000005061) SUN5 (ENSVVUG00000005048) #7 BPIFB2 (ENSVVUG00000005019) #8 BPIFB6 (ENSVVUG00000005002) #9 BPIFB3 (ENSVVUG00000004985) #10 BPIFB4 (ENSVVUG00000004980) #11 ENSVVUG00000004976 #13 ENSVVUG00000004973 BPIFA3 (ENSVVUG00000004970) #15 BPIFA1 (ENSVVUG00000004968) #17 BPIFB1 (ENSVVUG00000004954) #18 ENSVVUG00000004922 CDK5RAP1 (ENSVVUG00000004885) #20 SNTA1 (ENSVVUG00000004863) #21 CBFA2T2 (ENSVVUG00000004825) #22 ACTL10 (ENSVVUG00000004819) #25 NECAB3 (ENSVVUG00000004770) #23 E2F1 (ENSVVUG00000004757) #26 PXMP4 (ENSVVUG00000004749) #27 ZNF341 (ENSVVUG00000004600) #29 CHMP4B (ENSVVUG00000004581) #30 ENSVVUG00000004559 RALY (ENSVVUG00000004546) #32 ENSVVUG00000004519 #34 ENSVVUG00000004504 #33 AHCY (ENSVVUG00000004477) #36 ENSVVUG00000004473 ENSVVUG00000004434 ITCH (ENSVVUG00000004411) #37 MAP1LC3A (ENSVVUG00000004393) Felidae ANCESTRAL SPECIES 3 ENSGT00490000043329.a.a.a.ob.b ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014.d #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Panthera ANCESTRAL SPECIES 2 ENSGT00490000043329.a.a.a.pb ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014.d #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Panthera_a ANCESTRAL SPECIES 1 ENSGT00490000043329.a.a.a.pb ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263545.a.b.d.a ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014.d #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 leopard MODERN SPECIES 32 DNMT3B (ENSPPRG00000014375) MAPRE1 (ENSPPRG00000019866) EFCAB8 (ENSPPRG00000020444) SUN5 (ENSPPRG00000000075) #7 BPIFB2 (ENSPPRG00000000479) #8 BPIFB6 (ENSPPRG00000000780) #9 BPIFB3 (ENSPPRG00000002108) #10 BPIFB4 (ENSPPRG00000003010) #11 ENSPPRG00000003204 BPIFA3 (ENSPPRG00000003416) #15 BPIFA1 (ENSPPRG00000004405) #17 BPIFB1 (ENSPPRG00000005709) #18 ENSPPRG00000006537 #19 CDK5RAP1 (ENSPPRG00000007463) #20 SNTA1 (ENSPPRG00000007797) #21 CBFA2T2 (ENSPPRG00000009192) #22 ACTL10 (ENSPPRG00000015321) #25 NECAB3 (ENSPPRG00000011300) #23 E2F1 (ENSPPRG00000011405) #26 PXMP4 (ENSPPRG00000011904) #27 ZNF341 (ENSPPRG00000013033) #29 CHMP4B (ENSPPRG00000013846) #30 RALY (ENSPPRG00000014593) #32 EIF2S2 (ENSPPRG00000015102) #34 ASIP (ENSPPRG00000015476) #33 AHCY (ENSPPRG00000015988) #36 ITCH (ENSPPRG00000017149) #37 DYNLRB1 (ENSPPRG00000018205) MAP1LC3A (ENSPPRG00000020454) PIGU (ENSPPRG00000022523) TP53INP2 (ENSPPRG00000024794) lion MODERN SPECIES 3 MAPRE1 (ENSPLOG00000014581) EFCAB8 (ENSPLOG00000014634) SUN5 (ENSPLOG00000014700) #7 BPIFB2 (ENSPLOG00000014965) #8 BPIFB6 (ENSPLOG00000015103) #9 BPIFB3 (ENSPLOG00000015334) #10 BPIFB4 (ENSPLOG00000015542) #11 BPIFA2 (ENSPLOG00000015684) #13 ENSPLOG00000015750 BPIFA3 (ENSPLOG00000015799) #15 BPIFA1 (ENSPLOG00000015860) #17 BPIFB1 (ENSPLOG00000016033) #18 ENSPLOG00000016115 #19 CDK5RAP1 (ENSPLOG00000016219) #20 SNTA1 (ENSPLOG00000016287) #21 CBFA2T2 (ENSPLOG00000016366) #22 NECAB3 (ENSPLOG00000016443) #23 ENSPLOG00000016536 #24 ACTL10 (ENSPLOG00000016575) #25 E2F1 (ENSPLOG00000016585) #26 PXMP4 (ENSPLOG00000016650) #27 ZNF341 (ENSPLOG00000016700) #29 CHMP4B (ENSPLOG00000016734) #30 RALY (ENSPLOG00000016811) #32 EIF2S2 (ENSPLOG00000016881) #34 ASIP (ENSPLOG00000016919) #33 ENSPLOG00000016963 #36 ITCH (ENSPLOG00000017081) #37 DYNLRB1 (ENSPLOG00000017257) MAP1LC3A (ENSPLOG00000017340) PIGU (ENSPLOG00000017369) Tiger MODERN SPECIES 25 MAPRE1 (ENSPTIG00000009541) EFCAB8 (ENSPTIG00000010965) SUN5 (ENSPTIG00000013586) #7 BPIFB2 (ENSPTIG00000017316) #8 BPIFB6 (ENSPTIG00000017591) #9 BPIFB3 (ENSPTIG00000019519) #10 BPIFB4 (ENSPTIG00000021563) #11 BPIFA2 (ENSPTIG00000002366) #13 ENSPTIG00000006019 BPIFA3 (ENSPTIG00000006775) #15 BPIFA1 (ENSPTIG00000008137) #17 BPIFB1 (ENSPTIG00000012791) #18 ENSPTIG00000013877 #19 CDK5RAP1 (ENSPTIG00000016645) #20 SNTA1 (ENSPTIG00000018658) #21 CBFA2T2 (ENSPTIG00000020570) #22 NECAB3 (ENSPTIG00000009683) #23 ACTL10 (ENSPTIG00000001807) #25 E2F1 (ENSPTIG00000016955) #26 PXMP4 (ENSPTIG00000018768) #27 ZNF341 (ENSPTIG00000019844) #29 CHMP4B (ENSPTIG00000021794) #30 RALY (ENSPTIG00000021910) #32 EIF2S2 (ENSPTIG00000022041) #34 ASIP (ENSPTIG00000022078) #33 AHCY (ENSPTIG00000022112) #36 ITCH (ENSPTIG00000005169) #37 DYNLRB1 (ENSPTIG00000007501) MAP1LC3A (ENSPTIG00000008448) PIGU (ENSPTIG00000009571) TP53INP2 (ENSPTIG00000011147) Cat MODERN SPECIES 2 MAPRE1 (ENSFCAG00000007783) EFCAB8 (ENSFCAG00000037633) SUN5 (ENSFCAG00000025943) #7 BPIFB2 (ENSFCAG00000015179) #8 BPIFB6 (ENSFCAG00000015181) #9 BPIFB3 (ENSFCAG00000015183) #10 BPIFB4 (ENSFCAG00000015185) #11 BPIFA2 (ENSFCAG00000043660) #13 ENSFCAG00000015188 BPIFA3 (ENSFCAG00000022440) #15 BPIFA1 (ENSFCAG00000015193) #17 ENSFCAG00000030030 ENSFCAG00000049613 CDK5RAP1 (ENSFCAG00000015197) #20 SNTA1 (ENSFCAG00000026500) #21 CBFA2T2 (ENSFCAG00000030382) #22 CA3H20orf144 (ENSFCAG00000021903) #24 ACTL10 (ENSFCAG00000005015) #25 NECAB3 (ENSFCAG00000005010) #23 E2F1 (ENSFCAG00000005016) #26 ZNF341 (ENSFCAG00000018478) #29 CHMP4B (ENSFCAG00000025893) #30 EIF2S2 (ENSFCAG00000026834) #34 RALY (ENSFCAG00000025252) #32 ASIP (ENSFCAG00000011037) #33 AHCY (ENSFCAG00000007301) #36 ITCH (ENSFCAG00000008780) #37 DYNLRB1 (ENSFCAG00000002304) MAP1LC3A (ENSFCAG00000022040) PIGU (ENSFCAG00000002305) TP53INP2 (ENSFCAG00000045855) Laurasiatheria_c ANCESTRAL SPECIES 17 ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Equus ANCESTRAL SPECIES 8 ENSGT00490000043329.a.a.a.pb ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.a ##19 ENSGT01100000263546.d.b.a.a.a.a.b.a #17 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a.a #17 ENSGT01100000263546.d.b.b.a #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT01050000245239.e.b ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 Horse MODERN SPECIES 14 LATH (ENSECAG00000033314) ##19 BPIFA2 (ENSECAG00000000297) #13 ENSECAG00000044582 ##19 ENSECAG00000041946 #17 ENSECAG00000022575 #17 ENSECAG00000037593 #17 ENSECAG00000053425 ENSECAG00000014407 #18 ENSECAG00000027711 #15 ENSECAG00000020661 #15 ENSECAG00000041183 #17 ENSECAG00000023336 #18 ENSECAG00000000778 #19 SNTA1 (ENSECAG00000020715) #20 SNTA1 (ENSECAG00000057698) #21 CBFA2T2 (ENSECAG00000025052) #22 NECAB3 (ENSECAG00000012086) #23 ENSECAG00000049637 #24 ACTL10 (ENSECAG00000001232) #25 PXMP4 (ENSECAG00000024954) #27 ZNF341 (ENSECAG00000000301) #29 CHMP4B (ENSECAG00000008311) #30 RALY (ENSECAG00000012357) #32 EIF2S2 (ENSECAG00000050295) #34 ENSECAG00000040547 #34 ASIP (ENSECAG00000004241) #33 ENSECAG00000055038 ENSECAG00000020551 #36 ENSECAG00000060369 #36 ITCH (ENSECAG00000016216) #37 PIGU (ENSECAG00000017510) Donkey MODERN SPECIES 6 SUN5 (ENSEASG00005004397) #7 BPIFB2 (ENSEASG00005004416) #8 BPIFB6 (ENSEASG00005004435) #9 BPIFB3 (ENSEASG00005004457) #10 BPIFB4 (ENSEASG00005004467) #11 ENSEASG00005037736 #12 BPIFA2 (ENSEASG00005007789) #13 ENSEASG00005034954 ##19 ENSEASG00005004350 #17 ENSEASG00005028659 BPIFA3 (ENSEASG00005008570) #15 BPIFB1 (ENSEASG00005026747) #18 ENSEASG00005036966 #19 CDK5RAP1 (ENSEASG00005008558) #20 SNTA1 (ENSEASG00005008555) #21 CBFA2T2 (ENSEASG00005008552) #22 NECAB3 (ENSEASG00005008543) #23 ENSEASG00005008547 #24 ENSEASG00005032176 #25 E2F1 (ENSEASG00005008538) #26 PXMP4 (ENSEASG00005035010) #27 ZNF341 (ENSEASG00005008514) #29 ENSEASG00005034253 #30 RALY (ENSEASG00005008501) #32 EIF2S2 (ENSEASG00005008498) #34 ASIP (ENSEASG00005024850) #33 ENSEASG00005033842 ENSEASG00005028379 #36 ENSEASG00005037670 #36 ITCH (ENSEASG00005007446) #37 ENSEASG00005036210 Chiroptera ANCESTRAL SPECIES 7 ENSGT00390000012419 ENSGT00940000156928 ENSGT00490000043329.a.a.a.pb ENSGT00930000151259 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Microchiroptera ANCESTRAL SPECIES 6 ENSGT00940000157729 ENSGT00390000012419 ENSGT00940000156928 ENSGT00490000043329.a.a.a.pb ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Microbat MODERN SPECIES 997 MAPRE1 (ENSMLUG00000016403) SUN5 (ENSMLUG00000016408) #7 BPIFB2 (ENSMLUG00000016415) #8 ENSMLUG00000016424 #9 BPIFB3 (ENSMLUG00000016437) #10 BPIFB4 (ENSMLUG00000016442) #11 ENSMLUG00000016865 #13 BPIFA3 (ENSMLUG00000000658) #15 BPIFA1 (ENSMLUG00000000670) #17 ENSMLUG00000003811 ENSMLUG00000029998 #19 ENSMLUG00000003825 CDK5RAP1 (ENSMLUG00000005632) #20 SNTA1 (ENSMLUG00000005643) #21 ENSMLUG00000023956 CBFA2T2 (ENSMLUG00000015344) #22 NECAB3 (ENSMLUG00000015354) #23 ACTL10 (ENSMLUG00000023024) #25 E2F1 (ENSMLUG00000015371) #26 PXMP4 (ENSMLUG00000015379) #27 ZNF341 (ENSMLUG00000015386) #29 ENSMLUG00000027593 CHMP4B (ENSMLUG00000015397) #30 ENSMLUG00000005330 #32 EIF2S2 (ENSMLUG00000005335) #34 ASIP (ENSMLUG00000001062) #33 AHCY (ENSMLUG00000001070) #36 ITCH (ENSMLUG00000004798) #37 DYNLRB1 (ENSMLUG00000004820) MAP1LC3A (ENSMLUG00000006105) PIGU (ENSMLUG00000004825) Greater horseshoe bat MODERN SPECIES 15 NOL4L (ENSRFEG00010011006) COMMD7 (ENSRFEG00010010850) DNMT3B (ENSRFEG00010010315) MAPRE1 (ENSRFEG00010010133) SUN5 (ENSRFEG00010009894) #7 BPIFB2 (ENSRFEG00010009739) #8 BPIFB6 (ENSRFEG00010009586) #9 BPIFB3 (ENSRFEG00010009403) #10 BPIFB4 (ENSRFEG00010009259) #11 BPIFA2 (ENSRFEG00010009183) #13 BPIFA3 (ENSRFEG00010009054) #15 ENSRFEG00010008900 #17 BPIFB1 (ENSRFEG00010008738) #18 CDK5RAP1 (ENSRFEG00010008644) #20 SNTA1 (ENSRFEG00010008565) #21 CBFA2T2 (ENSRFEG00010008347) #22 C20orf144 (ENSRFEG00010008315) #24 ACTL10 (ENSRFEG00010008302) #25 NECAB3 (ENSRFEG00010008150) #23 E2F1 (ENSRFEG00010008064) #26 PXMP4 (ENSRFEG00010008002) #27 ZNF341 (ENSRFEG00010007927) #29 ENSRFEG00010007891 CHMP4B (ENSRFEG00010007840) #30 RALY (ENSRFEG00010007771) #32 EIF2S2 (ENSRFEG00010007720) #34 ASIP (ENSRFEG00010007692) #33 AHCY (ENSRFEG00010007632) #36 ITCH (ENSRFEG00010007315) #37 MAP1LC3A (ENSRFEG00010007180) PIGU (ENSRFEG00010007108) Megabat MODERN SPECIES 372 ENSPVAG00000010282 CDK5RAP1 (ENSPVAG00000010283) #20 SNTA1 (ENSPVAG00000010285) #21 CBFA2T2 (ENSPVAG00000010286) #22 NECAB3 (ENSPVAG00000010287) #23 C20orf144 (ENSPVAG00000010288) #24 E2F1 (ENSPVAG00000010290) #26 PXMP4 (ENSPVAG00000010291) #27 ZNF341 (ENSPVAG00000010292) #29 CHMP4B (ENSPVAG00000010293) #30 Artiodactyla ANCESTRAL SPECIES 18 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Suina ANCESTRAL SPECIES 9 ENSGT00490000043329.a.a.a.pb ENSGT00930000151259 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00530000063829.C ENSGT00730000111114 Pig MODERN SPECIES 8 ENSSSCG00000059506 SUN5 (ENSSSCG00000007256) #7 BPIFB2 (ENSSSCG00000029714) #8 BPIFB6 (ENSSSCG00000025052) #9 BPIFB3 (ENSSSCG00000026137) #10 BPIFB4 (ENSSSCG00000029295) #11 BPIFA2 (ENSSSCG00000007259) #13 BPIFA3 (ENSSSCG00000024787) #15 BPIFA1 (ENSSSCG00000007260) #17 BPIFB1 (ENSSSCG00000007261) #18 ENSSSCG00000007262 #19 ENSSSCG00000007263 CDK5RAP1 (ENSSSCG00000007264) #20 SNTA1 (ENSSSCG00000063004) #21 ENSSSCG00000034263 CBFA2T2 (ENSSSCG00000027410) #22 NECAB3 (ENSSSCG00000029626) #23 ENSSSCG00000047940 #24 ACTL10 (ENSSSCG00000044750) #25 E2F1 (ENSSSCG00000007268) #26 ENSSSCG00000034625 #27 ZNF341 (ENSSSCG00000021769) #29 CHMP4B (ENSSSCG00000007272) #30 RALY (ENSSSCG00000007275) #32 EIF2S2 (ENSSSCG00000026617) #34 ASIP (ENSSSCG00000053652) #33 AHCY (ENSSSCG00000007278) #36 ITCH (ENSSSCG00000007280) #37 ENSSSCG00000043574 ENSSSCG00000037510 PIGU (ENSSSCG00000007282) Chacoan peccary MODERN SPECIES 801 MAPRE1 (ENSCWAG00000007693) ENSCWAG00000007672 SUN5 (ENSCWAG00000007557) #7 BPIFB2 (ENSCWAG00000007471) #8 BPIFB6 (ENSCWAG00000007416) #9 BPIFB3 (ENSCWAG00000007348) #10 BPIFB4 (ENSCWAG00000007278) #11 BPIFA2 (ENSCWAG00000007236) #13 ENSCWAG00000007185 #15 BPIFA1 (ENSCWAG00000007132) #17 BPIFB1 (ENSCWAG00000007056) #18 ENSCWAG00000007007 ENSCWAG00000006962 CDK5RAP1 (ENSCWAG00000006898) #20 SNTA1 (ENSCWAG00000006848) #21 CBFA2T2 (ENSCWAG00000006761) #22 ENSCWAG00000006723 #24 ACTL10 (ENSCWAG00000006716) #25 NECAB3 (ENSCWAG00000006683) #23 E2F1 (ENSCWAG00000006652) #26 PXMP4 (ENSCWAG00000006623) #27 ZNF341 (ENSCWAG00000006507) #29 ENSCWAG00000006485 #30 RALY (ENSCWAG00000006424) #32 EIF2S2 (ENSCWAG00000006369) #34 ASIP (ENSCWAG00000006347) #33 AHCY (ENSCWAG00000006316) #36 ITCH (ENSCWAG00000006169) #37 DYNLRB1 (ENSCWAG00000006128) MAP1LC3A (ENSCWAG00000006108) PIGU (ENSCWAG00000006023) Artiodactyla_a ANCESTRAL SPECIES 16 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Camelidae ANCESTRAL SPECIES 10 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000167211 ENSGT00940000167979 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601.h #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Arabian camel MODERN SPECIES 10 DNMT3B (ENSCDRG00005017779) MAPRE1 (ENSCDRG00005019775) EFCAB8 (ENSCDRG00005019793) SUN5 (ENSCDRG00005008823) #7 BPIFB2 (ENSCDRG00005009158) #8 BPIFB6 (ENSCDRG00005009313) #9 BPIFB3 (ENSCDRG00005009566) #10 BPIFB4 (ENSCDRG00005009777) #11 ENSCDRG00005009985 #13 BPIFA3 (ENSCDRG00005010065) #15 BPIFA1 (ENSCDRG00005010253) #17 ENSCDRG00005010439 #18 ENSCDRG00005010639 #19 CDK5RAP1 (ENSCDRG00005010755) #20 SNTA1 (ENSCDRG00005010910) #21 CBFA2T2 (ENSCDRG00005011021) #22 NECAB3 (ENSCDRG00005011220) #23 C20orf144 (ENSCDRG00005011343) #24 ACTL10 (ENSCDRG00005011389) #25 PXMP4 (ENSCDRG00005011563) #27 ZNF341 (ENSCDRG00005011605) #29 CHMP4B (ENSCDRG00005012040) #30 ENSCDRG00005012091 ENSCDRG00005012122 #32 EIF2S2 (ENSCDRG00005012288) #34 ASIP (ENSCDRG00005012368) #33 AHCY (ENSCDRG00005012422) #36 ITCH (ENSCDRG00005012516) #37 DYNLRB1 (ENSCDRG00005012749) ENSCDRG00005012808 PIGU (ENSCDRG00005012895) Alpaca MODERN SPECIES 2721 CBFA2T2 (ENSVPAG00000000361) #22 ENSVPAG00000000363 #23 ACTL10 (ENSVPAG00000000364) #25 E2F1 (ENSVPAG00000000365) #26 ZNF341 (ENSVPAG00000000368) #29 CHMP4B (ENSVPAG00000000371) #30 RALY (ENSVPAG00000000373) #32 EIF2S2 (ENSVPAG00000000375) #34 Artiodactyla_b ANCESTRAL SPECIES 17 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Cetacea ANCESTRAL SPECIES 3 ENSGT00390000012419 ENSGT00940000156928 ENSGT00490000043329.a.a.a.ob.b ENSGT00930000151259 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Odontoceti ANCESTRAL SPECIES 3 ENSGT00940000157729 ENSGT00390000012419 ENSGT00940000156928 ENSGT00490000043329.a.a.a.ob.b ENSGT00930000151259 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.b #10 ENSGT00490000043329.a.a.a.pb ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 1205 ENSPCTG00005018220 #22 ENSPCTG00005018164 #24 NECAB3 (ENSPCTG00005017982) #23 E2F1 (ENSPCTG00005017904) #26 PXMP4 (ENSPCTG00005017869) #27 Sperm whale MODERN SPECIES 5 HCK (ENSPCTG00005013922) TM9SF4 (ENSPCTG00005013852) KIF3B (ENSPCTG00005013787) ASXL1 (ENSPCTG00005013333) NOL4L (ENSPCTG00005013151) COMMD7 (ENSPCTG00005012985) DNMT3B (ENSPCTG00005011472) MAPRE1 (ENSPCTG00005011307) ENSPCTG00005011260 SUN5 (ENSPCTG00005011002) #7 BPIFB3 (ENSPCTG00005010805) #10 BPIFA3 (ENSPCTG00005010684) #15 BPIFA1 (ENSPCTG00005010475) #17 CDK5RAP1 (ENSPCTG00005010350) #20 SNTA1 (ENSPCTG00005010299) #21 ENSPCTG00005010096 #22 ZNF341 (ENSPCTG00005010042) #29 CHMP4B (ENSPCTG00005009997) #30 RALY (ENSPCTG00005009899) #32 EIF2S2 (ENSPCTG00005009850) #34 ITCH (ENSPCTG00005009484) #37 ENSPCTG00005009432 ENSPCTG00005009300 #36 MAP1LC3A (ENSPCTG00005009227) ENSPCTG00005009176 PIGU (ENSPCTG00005008727) TP53INP2 (ENSPCTG00005008663) NCOA6 (ENSPCTG00005008566) GGT7 (ENSPCTG00005008516) ACSS2 (ENSPCTG00005008347) GSS (ENSPCTG00005008290) Odontoceti_a ANCESTRAL SPECIES 3 ENSGT00520000055578.a.a.c ENSGT00940000157729 ENSGT00390000012419 ENSGT00940000156928 ENSGT00490000043329.a.a.a.ob.b ENSGT00930000151259 ENSGT00940000155225 #7 ENSGT00490000043329.a.a.a.pb ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Odontoceti_b ANCESTRAL SPECIES 3 ENSGT00940000153739.a.a.j ENSGT00520000055578.a.a.c ENSGT00940000157729 ENSGT00390000012419 ENSGT00940000156928 ENSGT00490000043329.a.a.a.ob.b ENSGT00930000151259 ENSGT00940000155225 #7 ENSGT00490000043329.a.a.a.pb ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Monodontidae ANCESTRAL SPECIES 1 ENSGT00940000153739.a.a.j ENSGT00520000055578.a.a.c ENSGT00940000157729 ENSGT00390000012419 ENSGT00940000156928 ENSGT00490000043329.a.a.a.pb ENSGT00490000043329.a.a.a.ob.b ENSGT00930000151259 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000160361.a #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Narwhal MODERN SPECIES 299 POFUT1 (ENSMMNG00015003526) KIF3B (ENSMMNG00015003500) ASXL1 (ENSMMNG00015003413) NOL4L (ENSMMNG00015003321) COMMD7 (ENSMMNG00015003283) DNMT3B (ENSMMNG00015002780) ENSMMNG00015002532 ENSMMNG00015002504 SUN5 (ENSMMNG00015002432) #7 BPIFB4 (ENSMMNG00015002370) #11 BPIFA3 (ENSMMNG00015002319) #15 BPIFA1 (ENSMMNG00015002245) #17 BPIFB1 (ENSMMNG00015002195) #18 CDK5RAP1 (ENSMMNG00015002156) #20 SNTA1 (ENSMMNG00015002113) #21 CBFA2T2 (ENSMMNG00015002029) #22 ENSMMNG00015001984 #24 NECAB3 (ENSMMNG00015001933) #23 E2F1 (ENSMMNG00015001904) #26 PXMP4 (ENSMMNG00015001891) #27 ZNF341 (ENSMMNG00015001854) #29 ENSMMNG00015001817 #30 RALY (ENSMMNG00015001794) #32 EIF2S2 (ENSMMNG00015001772) #34 ENSMMNG00015001751 #33 AHCY (ENSMMNG00015001713) #36 ITCH (ENSMMNG00015001660) #37 DYNLRB1 (ENSMMNG00015001633) MAP1LC3A (ENSMMNG00015001604) PIGU (ENSMMNG00015001564) TP53INP2 (ENSMMNG00015001534) Beluga whale MODERN SPECIES 36 PLAGL2 (ENSDLEG00000018773) POFUT1 (ENSDLEG00000018766) KIF3B (ENSDLEG00000018749) ASXL1 (ENSDLEG00000018668) NOL4L (ENSDLEG00000018639) COMMD7 (ENSDLEG00000018629) DNMT3B (ENSDLEG00000018581) ENSDLEG00000018557 BPIFB4 (ENSDLEG00000018531) #11 BPIFA3 (ENSDLEG00000018509) #15 BPIFA1 (ENSDLEG00000018496) #17 ENSDLEG00000018481 #18 ENSDLEG00000018464 #20 ENSDLEG00000018457 #20 SNTA1 (ENSDLEG00000018449) #21 CBFA2T2 (ENSDLEG00000018440) #22 ENSDLEG00000018425 #24 ACTL10 (ENSDLEG00000018420) #25 NECAB3 (ENSDLEG00000018392) #23 E2F1 (ENSDLEG00000018330) #26 PXMP4 (ENSDLEG00000018317) #27 ZNF341 (ENSDLEG00000018304) #29 CHMP4B (ENSDLEG00000018298) #30 RALY (ENSDLEG00000018282) #32 EIF2S2 (ENSDLEG00000018274) #34 ASIP (ENSDLEG00000018261) #33 AHCY (ENSDLEG00000018252) #36 ITCH (ENSDLEG00000018226) #37 DYNLRB1 (ENSDLEG00000018207) MAP1LC3A (ENSDLEG00000018191) PIGU (ENSDLEG00000018167) Vaquita MODERN SPECIES 6 PLAGL2 (ENSPSNG00000005936) POFUT1 (ENSPSNG00000005902) KIF3B (ENSPSNG00000005861) ASXL1 (ENSPSNG00000005728) NOL4L (ENSPSNG00000005632) COMMD7 (ENSPSNG00000005578) DNMT3B (ENSPSNG00000005285) MAPRE1 (ENSPSNG00000005125) ENSPSNG00000005099 SUN5 (ENSPSNG00000005025) #7 BPIFA3 (ENSPSNG00000004966) #15 BPIFA1 (ENSPSNG00000004902) #17 BPIFB1 (ENSPSNG00000004841) #18 CDK5RAP1 (ENSPSNG00000004778) #20 SNTA1 (ENSPSNG00000015499) #21 CBFA2T2 (ENSPSNG00000015283) #22 ENSPSNG00000015208 #24 NECAB3 (ENSPSNG00000015043) #23 E2F1 (ENSPSNG00000014974) #26 PXMP4 (ENSPSNG00000014910) #27 ZNF341 (ENSPSNG00000014477) #29 CHMP4B (ENSPSNG00000014408) #30 RALY (ENSPSNG00000014290) #32 EIF2S2 (ENSPSNG00000014204) #34 ASIP (ENSPSNG00000014123) #33 ENSPSNG00000014022 #36 ITCH (ENSPSNG00000013334) #37 MAP1LC3A (ENSPSNG00000013092) PIGU (ENSPSNG00000012993) TP53INP2 (ENSPSNG00000012935) ENSPSNG00000012910 Dolphin MODERN SPECIES 2446 CBFA2T2 (ENSTTRG00000010094) #22 NECAB3 (ENSTTRG00000010095) #23 C20orf144 (ENSTTRG00000010097) #24 ACTL10 (ENSTTRG00000010098) #25 E2F1 (ENSTTRG00000010099) #26 PXMP4 (ENSTTRG00000010100) #27 ZNF341 (ENSTTRG00000010128) #29 CHMP4B (ENSTTRG00000010145) #30 Blue whale MODERN SPECIES 6 NOL4L (ENSBMSG00010016482) ENSBMSG00010016439 COMMD7 (ENSBMSG00010016369) DNMT3B (ENSBMSG00010015879) MAPRE1 (ENSBMSG00010015710) ENSBMSG00010015685 BPIFB2 (ENSBMSG00010015628) #8 BPIFB6 (ENSBMSG00010015545) #9 BPIFB3 (ENSBMSG00010015474) #10 BPIFB4 (ENSBMSG00010015330) #11 BPIFA3 (ENSBMSG00010015251) #15 BPIFA1 (ENSBMSG00010015165) #17 BPIFB1 (ENSBMSG00010015057) #18 CDK5RAP1 (ENSBMSG00010015008) #20 SNTA1 (ENSBMSG00010014974) #21 CBFA2T2 (ENSBMSG00010014897) #22 ENSBMSG00010014841 ENSBMSG00010014818 #24 ACTL10 (ENSBMSG00010014804) #25 NECAB3 (ENSBMSG00010014701) #23 E2F1 (ENSBMSG00010014642) #26 PXMP4 (ENSBMSG00010014607) #27 ZNF341 (ENSBMSG00010014577) #29 ENSBMSG00010014552 #30 RALY (ENSBMSG00010014524) #32 EIF2S2 (ENSBMSG00010014478) #34 ENSBMSG00010014441 #33 AHCY (ENSBMSG00010014387) #36 ENSBMSG00010014355 ENSBMSG00010014323 ITCH (ENSBMSG00010014131) #37 Pecora DUPLICATION Pecora DUPLICATION Pecora ANCESTRAL SPECIES 9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b.a #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a.t #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183176.a.s.a #22 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00530000063829.C ENSGT00730000111114 Percora_a ANCESTRAL SPECIES 10 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b.a #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a.t #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183176.a.s.a #22 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00530000063829.C ENSGT00730000111114 Bovidae ANCESTRAL SPECIES 10 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b.a.a #13 ENSGT01100000263546.d.b.a.b.b #13 ENSGT01100000263546.d.b.a.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a.s.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Caprinae ANCESTRAL SPECIES 21 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b.a.a #13 ENSGT00950000183604.b.a ENSGT00950000183604.b.b ENSGT01100000263546.d.b.a.b.a.b #13 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a.s.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Rambouillet Sheep MODERN SPECIES 4 BPIFB6 (ENSOARG00020009171) #9 BPIFB3 (ENSOARG00020009266) #10 BPIFB4 (ENSOARG00020009376) #11 ENSOARG00020009477 #13 ENSOARG00020009537 #13 ENSOARG00020009595 ENSOARG00020009657 ENSOARG00020009694 ENSOARG00020009734 #13 BPIFA3 (ENSOARG00020009757) #15 BPIFA1 (ENSOARG00020009831) #17 ENSOARG00020010310 #19 CDK5RAP1 (ENSOARG00020010445) #20 SNTA1 (ENSOARG00020010934) #21 ENSOARG00020011013 ENSOARG00020011066 #22 NECAB3 (ENSOARG00020011215) #23 ENSOARG00020011959 #24 E2F1 (ENSOARG00020011997) #26 PXMP4 (ENSOARG00020012090) #27 ZNF341 (ENSOARG00020012178) #29 CHMP4B (ENSOARG00020012426) #30 RALY (ENSOARG00020012493) #32 ENSOARG00020012697 #34 AHCY (ENSOARG00020012830) #36 ITCH (ENSOARG00020013255) #37 DYNLRB1 (ENSOARG00020013544) MAP1LC3A (ENSOARG00020013584) PIGU (ENSOARG00020013640) TP53INP2 (ENSOARG00020013838) NCOA6 (ENSOARG00020013923) Goat MODERN SPECIES 4 BPIFB6 (ENSCHIG00000019460) #9 BPIFB3 (ENSCHIG00000023551) #10 BPIFB4 (ENSCHIG00000015953) #11 ENSCHIG00000009057 ENSCHIG00000001593 ENSCHIG00000021281 ENSCHIG00000014390 #13 ENSCHIG00000023902 ENSCHIG00000021482 #13 BPIFA3 (ENSCHIG00000019106) #15 BPIFA1 (ENSCHIG00000024834) #17 BPIFB1 (ENSCHIG00000017212) #18 ENSCHIG00000006775 #19 CDK5RAP1 (ENSCHIG00000026048) #20 SNTA1 (ENSCHIG00000026424) #21 ENSCHIG00000017263 #22 NECAB3 (ENSCHIG00000024415) #23 ENSCHIG00000024263 #24 ACTL10 (ENSCHIG00000002177) #25 E2F1 (ENSCHIG00000015683) #26 PXMP4 (ENSCHIG00000019935) #27 ZNF341 (ENSCHIG00000018677) #29 CHMP4B (ENSCHIG00000015320) #30 RALY (ENSCHIG00000026609) #32 ENSCHIG00000026317 #34 ENSCHIG00000012008 ASIP (ENSCHIG00000014323) #33 AHCY (ENSCHIG00000026741) #36 ITCH (ENSCHIG00000013191) #37 DYNLRB1 (ENSCHIG00000017947) MAP1LC3A (ENSCHIG00000022203) Bovinae ANCESTRAL SPECIES 23 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b.a.a #13 ENSGT01100000263546.d.b.a.b.b #13 ENSGT00390000016972.a.b.a.b.b.b ENSGT01100000263546.d.b.a.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a.s.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183176.a.t #22 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562.a #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00390000014165.c.a.b.b.b ENSGT00940000157014.a #37 ENSGT00390000011067.A Bos ANCESTRAL SPECIES 24 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b.a.a #13 ENSGT01100000263546.d.b.a.b.b #13 ENSGT00390000016972.a.b.a.b.b.b ENSGT01100000263546.d.b.a.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a.s.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183176.a.t #22 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562.a #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00390000014165.c.a.b.b.b ENSGT00940000157014.a #37 ENSGT00390000011067.A Bos_b ANCESTRAL SPECIES 26 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b.a.a.a #13 ENSGT01100000263546.d.b.a.b.a.a.b #13 ENSGT01100000263546.d.b.a.b.b #13 ENSGT00390000016972.a.b.a.b.b.b ENSGT01100000263546.d.b.a.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a.s.a #22 ENSGT00950000183010.a.b.a.a.a.a.b ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562.a.a #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00390000014165.c.a.b.b.b ENSGT00940000157014.a #37 ENSGT00390000011067.A Hybrid Bos Indicus MODERN SPECIES 4 BPIFB3 (ENSBIXG00005027593) #10 BPIFB4 (ENSBIXG00005027645) #11 ENSBIXG00005027671 #13 ENSBIXG00005027683 #13 ENSBIXG00005027704 ENSBIXG00005005327 #13 BPIFA3 (ENSBIXG00005027808) #15 BPIFA1 (ENSBIXG00005027857) #17 ENSBIXG00005027873 BPIFB1 (ENSBIXG00005027890) #18 ENSBIXG00005027937 #19 ENSBIXG00005027971 CDK5RAP1 (ENSBIXG00005028076) #20 SNTA1 (ENSBIXG00005028108) #21 ENSBIXG00005004838 ENSBIXG00005028172 #22 ENSBIXG00005004852 ENSBIXG00005028229 #24 ACTL10 (ENSBIXG00005028235) #25 NECAB3 (ENSBIXG00005028280) #23 E2F1 (ENSBIXG00005028294) #26 ENSBIXG00005028326 #27 ZNF341 (ENSBIXG00005028356) #29 ENSBIXG00005004879 #30 RALY (ENSBIXG00005028479) #32 EIF2S2 (ENSBIXG00005006636) #34 ASIP (ENSBIXG00005004914) #33 AHCY (ENSBIXG00005028542) #36 ENSBIXG00005028582 ENSBIXG00005028645 #37 DYNLRB1 (ENSBIXG00005028646) Cow MODERN SPECIES 4 BPIFB3 (ENSBTAG00000038687) #10 BPIFB4 (ENSBTAG00000038412) #11 BPIFA2A (ENSBTAG00000009144) #13 ENSBTAG00000031375 #13 BPIFA2C (ENSBTAG00000031376) #13 ENSBTAG00000011704 BPIFA2B (ENSBTAG00000019752) #13 ENSBTAG00000031373 BPIFA3 (ENSBTAG00000006802) #15 BPIFA1 (ENSBTAG00000017098) #17 BPIFB1 (ENSBTAG00000015724) #18 BPIFB5 (ENSBTAG00000031361) #19 CDK5RAP1 (ENSBTAG00000018535) #20 ENSBTAG00000031354 SNTA1 (ENSBTAG00000000512) #21 ENSBTAG00000010131 #22 ENSBTAG00000053051 ENSBTAG00000053797 NECAB3 (ENSBTAG00000003946) #23 C13H20orf144 (ENSBTAG00000003962) #24 E2F1 (ENSBTAG00000003971) #26 PXMP4 (ENSBTAG00000038738) #27 ZNF341 (ENSBTAG00000039313) #29 CHMP4B (ENSBTAG00000013387) #30 RALY (ENSBTAG00000016524) #32 EIF2S2 (ENSBTAG00000005969) #34 ASIP (ENSBTAG00000034077) #33 AHCY (ENSBTAG00000018101) #36 ENSBTAG00000046623 ITCH (ENSBTAG00000000308) #37 DYNLRB1 (ENSBTAG00000006134) Bos_a ANCESTRAL SPECIES 7 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b.a.a #13 ENSGT01100000263546.d.b.a.b.b #13 ENSGT00390000016972.a.b.a.b.b.b ENSGT01100000263546.d.b.a.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT00940000170884 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a.s.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562.a #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00390000014165.c.a.b.b.b ENSGT00940000157014.a #37 ENSGT00390000011067.A ENSGT00940000158853 Domestic yak MODERN SPECIES 3 BPIFB6 (ENSBGRG00000005172) #9 BPIFB3 (ENSBGRG00000005308) #10 BPIFB4 (ENSBGRG00000005415) #11 ENSBGRG00000005450 #12 ENSBGRG00000005469 #13 ENSBGRG00000005491 #13 ENSBGRG00000005545 ENSBGRG00000005555 #13 BPIFA3 (ENSBGRG00000005582) #15 BPIFA1 (ENSBGRG00000005622) #17 BPIFB1 (ENSBGRG00000005686) #18 ENSBGRG00000005792 CDK5RAP1 (ENSBGRG00000005894) #20 ENSBGRG00000006020 SNTA1 (ENSBGRG00000006075) #21 CBFA2T2 (ENSBGRG00000006122) #22 ENSBGRG00000006162 ENSBGRG00000006170 ENSBGRG00000006176 #22 NECAB3 (ENSBGRG00000006194) #23 C20orf144 (ENSBGRG00000006314) #24 ACTL10 (ENSBGRG00000006349) #25 E2F1 (ENSBGRG00000006368) #26 ENSBGRG00000006426 #27 ZNF341 (ENSBGRG00000006484) #29 ENSBGRG00000006672 #30 RALY (ENSBGRG00000006728) #32 ENSBGRG00000006852 #34 ENSBGRG00000006899 ASIP (ENSBGRG00000006937) #33 AHCY (ENSBGRG00000006978) #36 Wild yak MODERN SPECIES 860 ENSBMUG00000024143 UBE2QL1 (ENSBMUG00000024147) NSUN2 (ENSBMUG00000024440) SRD5A1 (ENSBMUG00000024628) TENT4A (ENSBMUG00000024650) ENSBMUG00000024661 ENSBMUG00000024667 #13 ENSBMUG00000024685 BPIFA3 (ENSBMUG00000024694) #15 BPIFA1 (ENSBMUG00000024703) #17 BPIFB1 (ENSBMUG00000024706) #18 ENSBMUG00000024715 ENSBMUG00000024718 CDK5RAP1 (ENSBMUG00000024744) #20 SNTA1 (ENSBMUG00000024747) #21 ENSBMUG00000024759 #22 NECAB3 (ENSBMUG00000024769) #23 ACTL10 (ENSBMUG00000024774) #25 E2F1 (ENSBMUG00000024777) #26 ENSBMUG00000024790 #27 ZNF341 (ENSBMUG00000024798) #29 ENSBMUG00000024806 #30 American bison MODERN SPECIES 3266 ENSBBBG00000018505 ENSBBBG00000018502 #13 ENSBBBG00000018490 #13 ENSBBBG00000004542 ENSBBBG00000004535 ENSBBBG00000018462 #13 ENSBBBG00000018447 BPIFA3 (ENSBBBG00000004515) #15 BPIFA1 (ENSBBBG00000018424) #17 BPIFB1 (ENSBBBG00000018409) #18 ENSBBBG00000009135 CDK5RAP1 (ENSBBBG00000018377) #20 SNTA1 (ENSBBBG00000018296) #21 ENSBBBG00000018285 #22 ENSBBBG00000018224 NECAB3 (ENSBBBG00000018216) #23 ENSBBBG00000004464 #24 ACTL10 (ENSBBBG00000018177) #25 E2F1 (ENSBBBG00000008832) #26 ENSBBBG00000004455 #27 ZNF341 (ENSBBBG00000018116) #29 CHMP4B (ENSBBBG00000004443) #30 RALY (ENSBBBG00000004441) #32 EIF2S2 (ENSBBBG00000004436) #34 ASIP (ENSBBBG00000018031) #33 AHCY (ENSBBBG00000018017) #36 ENSBBBG00000007314 ENSBBBG00000008776 #37 DYNLRB1 (ENSBBBG00000017935) Yarkand deer MODERN SPECIES 15 BPIFB2 (ENSCHYG00000018354) #8 BPIFB6 (ENSCHYG00000018569) #9 BPIFB3 (ENSCHYG00000018802) #10 BPIFB4 (ENSCHYG00000018989) #11 ENSCHYG00000019160 ENSCHYG00000019207 #13 ENSCHYG00000019281 #13 ENSCHYG00000019367 BPIFA3 (ENSCHYG00000019399) #15 BPIFA1 (ENSCHYG00000019488) #17 BPIFB1 (ENSCHYG00000019627) #18 CDK5RAP1 (ENSCHYG00000019777) #20 ENSCHYG00000020289 #19 ENSCHYG00000020441 SNTA1 (ENSCHYG00000020536) #21 CBFA2T2 (ENSCHYG00000020600) #22 ENSCHYG00000020718 NECAB3 (ENSCHYG00000020779) #23 ENSCHYG00000021007 #24 ACTL10 (ENSCHYG00000021085) #25 E2F1 (ENSCHYG00000021119) #26 PXMP4 (ENSCHYG00000021195) #27 ZNF341 (ENSCHYG00000021267) #29 CHMP4B (ENSCHYG00000021413) #30 RALY (ENSCHYG00000021487) #32 EIF2S2 (ENSCHYG00000021669) #34 ASIP (ENSCHYG00000021759) #33 ENSCHYG00000021816 #36 ITCH (ENSCHYG00000021902) #37 DYNLRB1 (ENSCHYG00000022408) MAP1LC3A (ENSCHYG00000022485) Pecora ANCESTRAL SPECIES ENSGT00950000183176.a.s.b #22 Percora_a ANCESTRAL SPECIES ENSGT00950000183176.a.s.b #22 Bovidae ANCESTRAL SPECIES 7 ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000160820 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 ENSGT00390000004660.C.a.b ENSGT00940000158220 ENSGT00940000156774 ENSGT00390000018691 ENSGT00940000159673 ENSGT00530000063876.b ENSGT00940000156540 ENSGT00940000159098 ENSGT00730000111179.b ENSGT00950000183176.a.s.b #22 ENSGT01030000234620.a.b.a ENSGT00390000006996 ENSGT00940000158836 ENSGT00940000154656 ENSGT00940000156116.C ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 ENSGT00390000011163.b Bovinae ANCESTRAL SPECIES 11 ENSGT00940000156487 ENSGT00940000160820 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 ENSGT00940000153339.b.b ENSGT00390000004660.C.a.b ENSGT00940000158220 ENSGT00940000156774 ENSGT00390000018691 ENSGT00940000159673 ENSGT00530000063876.b ENSGT00940000156540 ENSGT00940000159098 ENSGT00730000111179.b ENSGT00950000183176.a.s.b #22 ENSGT01030000234620.a.b.a ENSGT00390000006996 ENSGT00940000158836 ENSGT00940000154656 ENSGT00940000156116.C ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 ENSGT00390000011163.b Bos ANCESTRAL SPECIES 13 ENSGT00940000156487 ENSGT00940000160820 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 ENSGT00940000153339.b.b ENSGT00390000004660.C.a.b ENSGT00940000158220 ENSGT00940000156774 ENSGT00390000018691 ENSGT00940000159673 ENSGT00530000063876.b ENSGT00940000156540 ENSGT00940000159098 ENSGT00730000111179.b ENSGT00950000183176.a.s.b #22 ENSGT01030000234620.a.b.a ENSGT00390000006996 ENSGT00940000158836 ENSGT00940000174775 ENSGT00940000154656 ENSGT00940000156116.C ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 Bos_b ANCESTRAL SPECIES 11 ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000160820 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 ENSGT00390000004660.C.a.b ENSGT00940000158220 ENSGT00940000156774 ENSGT00390000018691 ENSGT00940000159673 ENSGT00530000063876.b ENSGT00940000156540 ENSGT00940000159098 ENSGT00730000111179.b ENSGT00950000183176.a.s.b #22 ENSGT01030000234620.a.b.a ENSGT00390000006996 ENSGT00940000158836 ENSGT00940000174775 ENSGT00940000154656 ENSGT00940000156116.C ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 Hybrid Bos Indicus MODERN SPECIES 1 SIX4 (ENSBIXG00005009512) MNAT1 (ENSBIXG00005005464) TRMT5 (ENSBIXG00005000500) SLC38A6 (ENSBIXG00005009423) ENSBIXG00005009388 ENSBIXG00005009380 TMEM30B (ENSBIXG00005009377) PRKCH (ENSBIXG00005009360) HIF1A (ENSBIXG00005006498) SNAPC1 (ENSBIXG00005009224) SYT16 (ENSBIXG00005000411) ENSBIXG00005009162 KCNH5 (ENSBIXG00005009119) RHOJ (ENSBIXG00005009084) GPHB5 (ENSBIXG00005009065) ENSBIXG00005009045 #22 PPP2R5E (ENSBIXG00005009017) ENSBIXG00005008996 WDR89 (ENSBIXG00005005685) SGPP1 (ENSBIXG00005008960) SYNE2 (ENSBIXG00005008874) ESR2 (ENSBIXG00005008657) ENSBIXG00005008612 MTHFD1 (ENSBIXG00005008575) AKAP5 (ENSBIXG00005008554) ZBTB25 (ENSBIXG00005008539) ZBTB1 (ENSBIXG00005008501) PLEKHG3 (ENSBIXG00005008432) SPTB (ENSBIXG00005008345) CHURC1 (ENSBIXG00005008309) GPX2 (ENSBIXG00005008290) Cow MODERN SPECIES 1 SIX6 (ENSBTAG00000013035) SIX1 (ENSBTAG00000012139) SIX4 (ENSBTAG00000049091) MNAT1 (ENSBTAG00000030801) TRMT5 (ENSBTAG00000011796) SLC38A6 (ENSBTAG00000007931) TMEM30B (ENSBTAG00000016713) PRKCH (ENSBTAG00000003276) HIF1A (ENSBTAG00000020935) SNAPC1 (ENSBTAG00000020937) SYT16 (ENSBTAG00000018947) ENSBTAG00000030792 KCNH5 (ENSBTAG00000011379) RHOJ (ENSBTAG00000017200) GPHB5 (ENSBTAG00000049079) ENSBTAG00000055159 #22 PPP2R5E (ENSBTAG00000019784) WDR89 (ENSBTAG00000008815) SGPP1 (ENSBTAG00000004430) ENSBTAG00000051757 SYNE2 (ENSBTAG00000025450) ESR2 (ENSBTAG00000004498) ENSBTAG00000013836 MTHFD1 (ENSBTAG00000009641) ZBTB25 (ENSBTAG00000009643) AKAP5 (ENSBTAG00000009642) ZBTB1 (ENSBTAG00000040551) HSPA2 (ENSBTAG00000007807) PPP1R36 (ENSBTAG00000007809) PLEKHG3 (ENSBTAG00000001551) SPTB (ENSBTAG00000004732) Bos_a ANCESTRAL SPECIES 1 ENSGT00940000156487 ENSGT00940000160820 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 ENSGT00940000153339.b.b ENSGT00390000004660.C.a.b ENSGT00940000158220 ENSGT00940000156774 ENSGT00390000018691 ENSGT00940000159673 ENSGT00530000063876.b ENSGT00940000156540 ENSGT00940000159098 ENSGT00730000111179.b ENSGT00950000183176.a.s.b #22 ENSGT01030000234620.a.b.a ENSGT00390000006996 ENSGT00940000158836 ENSGT00940000174775 ENSGT00940000154656 ENSGT00940000156116.C ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 Wild yak MODERN SPECIES 980 RHOJ (ENSBMUG00000013993) GPHB5 (ENSBMUG00000013974) ENSBMUG00000013962 #22 PPP2R5E (ENSBMUG00000013936) WDR89 (ENSBMUG00000013913) American bison MODERN SPECIES 3156 ENSBBBG00000021955 RHOJ (ENSBBBG00000021964) GPHB5 (ENSBBBG00000021968) ENSBBBG00000022035 #22 PPP2R5E (ENSBBBG00000022085) WDR89 (ENSBBBG00000022094) SGPP1 (ENSBBBG00000022099) SYNE2 (ENSBBBG00000005964) ESR2 (ENSBBBG00000022747) ENSBBBG00000022788 MTHFD1 (ENSBBBG00000022812) AKAP5 (ENSBBBG00000022818) ZBTB25 (ENSBBBG00000022827) ZBTB1 (ENSBBBG00000022836) HSPA2 (ENSBBBG00000022900) PPP1R36 (ENSBBBG00000022919) ENSBBBG00000022933 SPTB (ENSBBBG00000006063) CHURC1 (ENSBBBG00000023144) Caprinae ANCESTRAL SPECIES 11 ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000160820 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 ENSGT00390000004660.C.a.b ENSGT00940000158220 ENSGT00940000156774 ENSGT00390000018691 ENSGT00940000159673 ENSGT00530000063876.b ENSGT00940000156540 ENSGT00940000159098 ENSGT00730000111179.b ENSGT00950000183176.a.s.b #22 ENSGT01030000234620.a.b.a ENSGT00390000006996 ENSGT00940000158836 ENSGT00940000154656 ENSGT00940000156116.C ENSGT00390000012924.b ENSGT00940000154746 ENSGT00390000019941 ENSGT00940000159887 ENSGT00940000157501 ENSGT00940000154813 ENSGT00390000012412 ENSGT00940000156521.b ENSGT00940000158908 ENSGT00390000011163.b Rambouillet Sheep MODERN SPECIES 23 ENSOARG00020010525 TRMT5 (ENSOARG00020010606) SLC38A6 (ENSOARG00020010682) TMEM30B (ENSOARG00020010869) PRKCH (ENSOARG00020010910) HIF1A (ENSOARG00020011056) SNAPC1 (ENSOARG00020011607) ENSOARG00020011650 SYT16 (ENSOARG00020011691) ENSOARG00020011822 ENSOARG00020011846 KCNH5 (ENSOARG00020011903) ENSOARG00020012354 RHOJ (ENSOARG00020012405) GPHB5 (ENSOARG00020012444) ENSOARG00020012477 #22 PPP2R5E (ENSOARG00020012571) ENSOARG00020012701 WDR89 (ENSOARG00020012765) SGPP1 (ENSOARG00020012809) ENSOARG00020012856 SYNE2 (ENSOARG00020013014) ESR2 (ENSOARG00020014342) ENSOARG00020014541 ENSOARG00020014576 ENSOARG00020014600 MTHFD1 (ENSOARG00020014712) ZBTB25 (ENSOARG00020015169) AKAP5 (ENSOARG00020015250) ZBTB1 (ENSOARG00020015274) HSPA2 (ENSOARG00020015317) Goat MODERN SPECIES 1 SIX4 (ENSCHIG00000012309) ENSCHIG00000022102 MNAT1 (ENSCHIG00000021930) TRMT5 (ENSCHIG00000018801) SLC38A6 (ENSCHIG00000020159) TMEM30B (ENSCHIG00000009225) PRKCH (ENSCHIG00000016844) ENSCHIG00000018951 HIF1A (ENSCHIG00000015613) SNAPC1 (ENSCHIG00000011278) SYT16 (ENSCHIG00000021144) ENSCHIG00000006728 KCNH5 (ENSCHIG00000000501) RHOJ (ENSCHIG00000016760) GPHB5 (ENSCHIG00000025724) ENSCHIG00000024045 #22 PPP2R5E (ENSCHIG00000025432) WDR89 (ENSCHIG00000013306) SGPP1 (ENSCHIG00000020626) ENSCHIG00000022808 SYNE2 (ENSCHIG00000017393) ESR2 (ENSCHIG00000011683) ENSCHIG00000026739 MTHFD1 (ENSCHIG00000001482) AKAP5 (ENSCHIG00000011249) ENSCHIG00000023459 ZBTB1 (ENSCHIG00000020242) HSPA2 (ENSCHIG00000010529) PPP1R36 (ENSCHIG00000013318) PLEKHG3 (ENSCHIG00000018176) SPTB (ENSCHIG00000011171) Pecora ANCESTRAL SPECIES 9 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b.a #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a.t #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183176.a.s.a #22 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 Percora_a ANCESTRAL SPECIES 10 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01010000222653 #12 ENSGT01100000263546.d.b.a.b.a #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a.t #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183176.a.s.a #22 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 Bovidae ANCESTRAL SPECIES ENSGT00950000183176.a.t #22 Bovinae ANCESTRAL SPECIES 23 ENSGT01100000263546.d.b.a.b.a.a #13 ENSGT01100000263546.d.b.a.b.b #13 ENSGT00390000016972.a.b.a.b.b.b ENSGT01100000263546.d.b.a.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a.s.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183176.a.t #22 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562.a #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00390000014165.c.a.b.b.b ENSGT00940000157014.a #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00940000155114.wb.a Bos ANCESTRAL SPECIES 24 ENSGT01100000263546.d.b.a.b.a.a #13 ENSGT01100000263546.d.b.a.b.b #13 ENSGT00390000016972.a.b.a.b.b.b ENSGT01100000263546.d.b.a.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a.s.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183176.a.t #22 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562.a #27 ENSGT00390000000546 #29 ENSGT00940000154663.r.a #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00390000014165.c.a.b.b.b ENSGT00940000157014.a #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00940000155114.wb.a Bos_a ANCESTRAL SPECIES ENSGT00950000183176.a.t #22 Domestic yak MODERN SPECIES 3 ENSBGRG00000005450 #12 ENSBGRG00000005469 #13 ENSBGRG00000005491 #13 ENSBGRG00000005545 ENSBGRG00000005555 #13 BPIFA3 (ENSBGRG00000005582) #15 BPIFA1 (ENSBGRG00000005622) #17 BPIFB1 (ENSBGRG00000005686) #18 ENSBGRG00000005792 CDK5RAP1 (ENSBGRG00000005894) #20 ENSBGRG00000006020 SNTA1 (ENSBGRG00000006075) #21 CBFA2T2 (ENSBGRG00000006122) #22 ENSBGRG00000006162 ENSBGRG00000006170 ENSBGRG00000006176 #22 NECAB3 (ENSBGRG00000006194) #23 C20orf144 (ENSBGRG00000006314) #24 ACTL10 (ENSBGRG00000006349) #25 E2F1 (ENSBGRG00000006368) #26 ENSBGRG00000006426 #27 ZNF341 (ENSBGRG00000006484) #29 ENSBGRG00000006672 #30 RALY (ENSBGRG00000006728) #32 ENSBGRG00000006852 #34 ENSBGRG00000006899 ASIP (ENSBGRG00000006937) #33 AHCY (ENSBGRG00000006978) #36 ENSBGRG00000007087 ENSBGRG00000007118 #37 DYNLRB1 (ENSBGRG00000007315) Siberian musk deer MODERN SPECIES 1198 ENSMMSG00000012944 ENSMMSG00000012907 #13 BPIFA3 (ENSMMSG00000012875) #15 BPIFA1 (ENSMMSG00000012839) #17 BPIFB1 (ENSMMSG00000012771) #18 ENSMMSG00000012706 #19 ENSMMSG00000012657 CDK5RAP1 (ENSMMSG00000012553) #20 SNTA1 (ENSMMSG00000012500) #21 CBFA2T2 (ENSMMSG00000012397) #22 ENSMMSG00000012366 ENSMMSG00000012346 #24 ACTL10 (ENSMMSG00000012331) #25 NECAB3 (ENSMMSG00000012299) #23 E2F1 (ENSMMSG00000012256) #26 PXMP4 (ENSMMSG00000012229) #27 ZNF341 (ENSMMSG00000012195) #29 CHMP4B (ENSMMSG00000012164) #30 RALY (ENSMMSG00000012103) #32 EIF2S2 (ENSMMSG00000012063) #34 ASIP (ENSMMSG00000012026) #33 AHCY (ENSMMSG00000011983) #36 ITCH (ENSMMSG00000011807) #37 DYNLRB1 (ENSMMSG00000011749) MAP1LC3A (ENSMMSG00000011725) Atlantogenata ANCESTRAL SPECIES 6 ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Xenarthra ANCESTRAL SPECIES 316 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 Armadillo MODERN SPECIES 1934 ENSDNOG00000039006 CDK5RAP1 (ENSDNOG00000015236) #20 ENSDNOG00000043650 SNTA1 (ENSDNOG00000040663) #21 CBFA2T2 (ENSDNOG00000007950) #22 NECAB3 (ENSDNOG00000039751) #23 ENSDNOG00000007969 #24 ACTL10 (ENSDNOG00000032070) #25 E2F1 (ENSDNOG00000046733) #26 PXMP4 (ENSDNOG00000007975) #27 ZNF341 (ENSDNOG00000034368) #29 CHMP4B (ENSDNOG00000032154) #30 ENSDNOG00000038139 ENSDNOG00000003227 #32 EIF2S2 (ENSDNOG00000047014) #34 ENSDNOG00000048473 Sloth MODERN SPECIES 7934 CBFA2T2 (ENSCHOG00000006523) #22 Afrotheria ANCESTRAL SPECIES 3 ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Tenrec MODERN SPECIES 8012 CBFA2T2 (ENSETEG00000018942) #22 Afrotheria_a ANCESTRAL SPECIES 3 ENSGT00940000163617 ENSGT00940000155225 #7 ENSGT01100000263546.e.a.a.b #8 ENSGT01100000263546.e.b #9 ENSGT01100000263546.e.a.b #10 ENSGT01100000263546.e.a.a.a.b #11 ENSGT01100000263546.d.b.a.b #13 ENSGT00510000049750 ENSGT01100000263546.d.b.a.a.a.b #15 ENSGT01100000263546.d.b.a.a.a.a #17 ENSGT01100000263546.d.b.b #18 ENSGT01100000263546.e.a.a.a.a #19 ENSGT00940000164301 ENSGT00940000160361 #20 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Hyrax MODERN SPECIES 7471 CBFA2T2 (ENSPCAG00000015597) #22 NECAB3 (ENSPCAG00000015675) #23 ENSPCAG00000015768 #24 ACTL10 (ENSPCAG00000015815) #25 E2F1 (ENSPCAG00000015826) #26 PXMP4 (ENSPCAG00000015896) #27 Elephant MODERN SPECIES 180 ENSLAFG00000020535 ENSLAFG00000032038 SUN5 (ENSLAFG00000021496) #7 BPIFB2 (ENSLAFG00000008987) #8 BPIFB6 (ENSLAFG00000028326) #9 BPIFB3 (ENSLAFG00000018176) #10 BPIFB4 (ENSLAFG00000002061) #11 ENSLAFG00000000105 #13 ENSLAFG00000003615 #15 BPIFA1 (ENSLAFG00000010265) #17 BPIFB1 (ENSLAFG00000010267) #18 ENSLAFG00000028139 #19 ENSLAFG00000014548 CDK5RAP1 (ENSLAFG00000001172) #20 SNTA1 (ENSLAFG00000027816) #21 CBFA2T2 (ENSLAFG00000018088) #22 NECAB3 (ENSLAFG00000018096) #23 ENSLAFG00000018104 #24 ACTL10 (ENSLAFG00000018108) #25 E2F1 (ENSLAFG00000018114) #26 PXMP4 (ENSLAFG00000004616) #27 ZNF341 (ENSLAFG00000007128) #29 CHMP4B (ENSLAFG00000022958) #30 RALY (ENSLAFG00000000321) #32 EIF2S2 (ENSLAFG00000016639) #34 ASIP (ENSLAFG00000005229) #33 ENSLAFG00000028026 #36 ITCH (ENSLAFG00000011603) #37 DYNLRB1 (ENSLAFG00000029820) MAP1LC3A (ENSLAFG00000027645) PIGU (ENSLAFG00000017870) Marsupialia ANCESTRAL SPECIES 9 ENSGT00940000158327 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000157465.a ENSGT00940000158554 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000159708 ENSGT00940000155448 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00390000013020 #24 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000155266.x ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a.g #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 Opossum MODERN SPECIES ENSMODG00000003922 FLT4 (ENSMODG00000003918) ENSMODG00000003904 TBC1D9B (ENSMODG00000003882) SQSTM1 (ENSMODG00000003806) MGAT4B (ENSMODG00000003778) LTC4S (ENSMODG00000003733) MAML1 (ENSMODG00000003725) ENSMODG00000003708 ENSMODG00000003673 L3MBTL1 (ENSMODG00000003647) SRSF6 (ENSMODG00000003107) ENSMODG00000023076 TOX2 (ENSMODG00000003070) SNTA1 (ENSMODG00000003050) #21 CBFA2T2 (ENSMODG00000003023) #22 NECAB3 (ENSMODG00000002977) #23 ENSMODG00000002993 #24 ENSMODG00000002988 #25 E2F1 (ENSMODG00000002875) #26 PXMP4 (ENSMODG00000002864) #27 ZNF341 (ENSMODG00000002856) #29 CHMP4B (ENSMODG00000002830) #30 ENSMODG00000002836 RALY (ENSMODG00000002819) #32 EIF2S2 (ENSMODG00000002805) #34 ENSMODG00000002765 ASIP (ENSMODG00000002762) #33 AHCY (ENSMODG00000002753) #36 ITCH (ENSMODG00000002732) #37 DYNLRB1 (ENSMODG00000002702) Marsupialia_b ANCESTRAL SPECIES 5 ENSGT00940000158327 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000157465.a ENSGT00940000158554 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000159708 ENSGT00940000155448 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000155266.x ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a.g #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Diprotodontia ANCESTRAL SPECIES 4 ENSGT00940000158327 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000157465.a ENSGT00940000158554 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000159708 ENSGT00940000155448 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000155266.x ENSGT00940000157601.x.a #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a.g #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00530000063829.C Diprotodontia_a ANCESTRAL SPECIES 5 ENSGT00940000158327 ENSGT00420000029848.A ENSGT00940000159358 ENSGT00940000157465.a ENSGT00940000158554 ENSGT00390000002781 ENSGT00940000156526.a ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a ENSGT00940000153137.a.b.a ENSGT00940000159708 ENSGT00940000155448 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000155266.x ENSGT00940000154663 #30 ENSGT00940000157601.x.b #32 ENSGT00940000157601.x.a #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a.g #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 Common wonbat MODERN SPECIES 1023 RASGEF1C (ENSVURG00010019833) CNOT6 (ENSVURG00010019814) GFPT2 (ENSVURG00010019801) MAPK9 (ENSVURG00010019784) ENSVURG00010019769 FLT4 (ENSVURG00010019743) RNF130 (ENSVURG00010019705) TBC1D9B (ENSVURG00010019683) SQSTM1 (ENSVURG00010019670) MAML1 (ENSVURG00010019659) CANX (ENSVURG00010019632) L3MBTL1 (ENSVURG00010019617) SRSF6 (ENSVURG00010019601) TOX2 (ENSVURG00010019590) SNTA1 (ENSVURG00010019377) #21 CBFA2T2 (ENSVURG00010019347) #22 ACTL10 (ENSVURG00010019341) #25 NECAB3 (ENSVURG00010019324) #23 E2F1 (ENSVURG00010019304) #26 PXMP4 (ENSVURG00010019297) #27 ZNF341 (ENSVURG00010019277) #29 ENSVURG00010019269 CHMP4B (ENSVURG00010019263) #30 ENSVURG00010019251 #32 EIF2S2 (ENSVURG00010019246) #34 ASIP (ENSVURG00010019239) #33 AHCY (ENSVURG00010019234) #36 ITCH (ENSVURG00010019217) #37 DYNLRB1 (ENSVURG00010019208) MAP1LC3A (ENSVURG00010019204) PIGU (ENSVURG00010019190) koala MODERN SPECIES 74 MAPK9 (ENSPCIG00000004062) ENSPCIG00000004056 FLT4 (ENSPCIG00000004027) ENSPCIG00000003992 TBC1D9B (ENSPCIG00000003952) SQSTM1 (ENSPCIG00000003936) MGAT4B (ENSPCIG00000003915) ENSPCIG00000003908 MAML1 (ENSPCIG00000003902) CANX (ENSPCIG00000003888) ENSPCIG00000033556 L3MBTL1 (ENSPCIG00000003824) SRSF6 (ENSPCIG00000003820) TOX2 (ENSPCIG00000005825) SNTA1 (ENSPCIG00000005829) #21 ENSPCIG00000005830 #22 ENSPCIG00000005833 #25 NECAB3 (ENSPCIG00000005831) #23 E2F1 (ENSPCIG00000005835) #26 PXMP4 (ENSPCIG00000005843) #27 ZNF341 (ENSPCIG00000005844) #29 ENSPCIG00000005849 CHMP4B (ENSPCIG00000005848) #30 ENSPCIG00000011153 #32 EIF2S2 (ENSPCIG00000011155) #34 ASIP (ENSPCIG00000028159) #33 ENSPCIG00000028158 #36 ENSPCIG00000028157 ITCH (ENSPCIG00000028155) #37 DYNLRB1 (ENSPCIG00000028154) ENSPCIG00000028153 Wallaby MODERN SPECIES 306 CBFA2T2 (ENSMEUG00000010889) #22 Tasmanian devil MODERN SPECIES 1 ENSSHAG00000004019 MAPK9 (ENSSHAG00000005542) ENSSHAG00000006299 ENSSHAG00000007344 ENSSHAG00000008447 ENSSHAG00000009809 SQSTM1 (ENSSHAG00000025384) MGAT4B (ENSSHAG00000010968) LTC4S (ENSSHAG00000025649) MAML1 (ENSSHAG00000011151) ENSSHAG00000011510 ENSSHAG00000028809 ENSSHAG00000012805 ENSSHAG00000013874 ENSSHAG00000015173 #21 ENSSHAG00000024966 #22 ENSSHAG00000023391 #23 E2F1 (ENSSHAG00000029215) #26 ENSSHAG00000023415 #24 PXMP4 (ENSSHAG00000029249) #27 ZNF341 (ENSSHAG00000022447) #29 ENSSHAG00000022664 ENSSHAG00000026098 #32 ENSSHAG00000022710 #32 EIF2S2 (ENSSHAG00000029026) #34 ENSSHAG00000031644 AHCY (ENSSHAG00000031421) #36 ITCH (ENSSHAG00000030062) #37 MAP1LC3A (ENSSHAG00000030605) PIGU (ENSSHAG00000017606) TP53INP2 (ENSSHAG00000017777) Platypus MODERN SPECIES 19 ENSOANG00000040104 ENSOANG00000036090 ENSOANG00000039787 ENSOANG00000009664 ENSOANG00000014372 ENSOANG00000041955 ENSOANG00000005431 ENSOANG00000015609 ENSOANG00000012145 ENSOANG00000048818 ENSOANG00000043837 ENSOANG00000040269 WDR72 (ENSOANG00000013014) ONECUT1 (ENSOANG00000040861) SNTA1 (ENSOANG00000002101) #21 CBFA2T2 (ENSOANG00000002585) #22 ENSOANG00000040856 TMOD3 (ENSOANG00000038195) LEO1 (ENSOANG00000003376) MAPK6 (ENSOANG00000004189) ENSOANG00000041390 GNB5 (ENSOANG00000047160) MYO5C (ENSOANG00000004161) MYO5A (ENSOANG00000004162) ARPP19 (ENSOANG00000040266) ATOSA (ENSOANG00000002613) SGK2 (ENSOANG00000039782) IFT52 (ENSOANG00000014960) MYBL2 (ENSOANG00000050677) PTPRT (ENSOANG00000015082) ENSOANG00000015088 Sauria ANCESTRAL SPECIES 16 ENSGT00700000104550.a ENSGT00940000158986 ENSGT01040000241001 ENSGT00950000183202.a.a ENSGT00390000013867 ENSGT00940000161648 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160950 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00980000199297 Archelosauria ANCESTRAL SPECIES ENSGT00390000003446 ENSGT00940000156028 ENSGT01000000215044 ENSGT00940000153998.a ENSGT00940000162847 ENSGT00960000189441 ENSGT00390000005575 ENSGT00390000004910 ENSGT00940000156202.b ENSGT00940000153251.a ENSGT00940000160950 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Cryptodira ANCESTRAL SPECIES 7 ENSGT00940000160331 ENSGT00950000182872.f.a.a.b ENSGT00700000104550.a ENSGT00940000158986 ENSGT00950000183202.a.a ENSGT00390000013867 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160950 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Testudinoidea ANCESTRAL SPECIES 28 ENSGT00940000160331 ENSGT00950000182872.f.a.a.b ENSGT00700000104550.a ENSGT00940000158986 ENSGT00950000183202.a.a ENSGT00390000013867 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160950 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Testudinidae ANCESTRAL SPECIES 34 ENSGT00940000156477 ENSGT00940000160331 ENSGT00950000182872.f.a.a.b ENSGT00700000104550.a ENSGT00940000158986 ENSGT00950000183202.a.a ENSGT00390000013867 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00980000199297 Goode s thornscrub tortoise MODERN SPECIES 5 SLA2 (ENSGEVG00005015961) NDRG3 (ENSGEVG00005015883) RALGAPB (ENSGEVG00005015620) CHD6 (ENSGEVG00005015334) RBL1 (ENSGEVG00005015196) SAMHD1 (ENSGEVG00005015144) ENSGEVG00005015088 SOGA1 (ENSGEVG00005014842) ACSS2 (ENSGEVG00005014698) GSS (ENSGEVG00005014633) ENSGEVG00005013945 TRPC4AP (ENSGEVG00005013841) EDEM2 (ENSGEVG00005013803) TOX2 (ENSGEVG00005013756) SNTA1 (ENSGEVG00005013723) #21 CBFA2T2 (ENSGEVG00005013689) #22 ENSGEVG00005013648 ACTL10 (ENSGEVG00005013631) #25 NECAB3 (ENSGEVG00005013465) #23 E2F1 (ENSGEVG00005013271) #26 PXMP4 (ENSGEVG00005013238) #27 ZNF341 (ENSGEVG00005013173) #29 CHMP4B (ENSGEVG00005013137) #30 RALY (ENSGEVG00005013016) #32 EIF2S2 (ENSGEVG00005012979) #34 ASIP (ENSGEVG00005012839) #33 AHCY (ENSGEVG00005012811) #36 ITCH (ENSGEVG00005012721) #37 DYNLRB1 (ENSGEVG00005012686) MAP1LC3A (ENSGEVG00005012664) PIGU (ENSGEVG00005012623) Abingdon island giant tortoise MODERN SPECIES 1738 EDEM2 (ENSCABG00000022391) TOX2 (ENSCABG00000022388) SNTA1 (ENSCABG00000022385) #21 CBFA2T2 (ENSCABG00000022375) #22 ACTL10 (ENSCABG00000022374) #25 NECAB3 (ENSCABG00000022373) #23 E2F1 (ENSCABG00000022372) #26 PXMP4 (ENSCABG00000022371) #27 ZNF341 (ENSCABG00000022370) #29 CHMP4B (ENSCABG00000022369) #30 ENSCABG00000022368 ENSCABG00000022367 Emydidae ANCESTRAL SPECIES 50 ENSGT00940000156477 ENSGT00940000160331 ENSGT00950000182872.f.a.a.b ENSGT00700000104550.a ENSGT00940000158986 ENSGT00950000183202.a.a ENSGT00390000013867 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160950 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00960000191106 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 painted turtle MODERN SPECIES 700 SLA2 (ENSCPBG00000019447) NDRG3 (ENSCPBG00000019437) RALGAPB (ENSCPBG00000019414) CHD6 (ENSCPBG00000019382) RBL1 (ENSCPBG00000019364) SAMHD1 (ENSCPBG00000019358) ENSCPBG00000019354 SOGA1 (ENSCPBG00000019350) ACSS2 (ENSCPBG00000019337) GSS (ENSCPBG00000019329) ENSCPBG00000019257 TRPC4AP (ENSCPBG00000019208) EDEM2 (ENSCPBG00000019199) TOX2 (ENSCPBG00000019193) SNTA1 (ENSCPBG00000019190) #21 CBFA2T2 (ENSCPBG00000019187) #22 ENSCPBG00000019184 ENSCPBG00000019182 NECAB3 (ENSCPBG00000019179) #23 E2F1 (ENSCPBG00000019177) #26 PXMP4 (ENSCPBG00000019176) #27 ZNF341 (ENSCPBG00000019174) #29 CHMP4B (ENSCPBG00000019173) #30 ENSCPBG00000019171 RALY (ENSCPBG00000019164) #32 EIF2S2 (ENSCPBG00000019159) #34 ASIP (ENSCPBG00000019156) #33 AHCY (ENSCPBG00000018709) #36 ITCH (ENSCPBG00000018232) #37 MAP1LC3A (ENSCPBG00000018213) PIGU (ENSCPBG00000018212) Three-toed box turtle MODERN SPECIES 108 SLA2 (ENSTMTG00000018980) NDRG3 (ENSTMTG00000018931) RALGAPB (ENSTMTG00000018881) CHD6 (ENSTMTG00000018734) RBL1 (ENSTMTG00000018676) SAMHD1 (ENSTMTG00000018637) ENSTMTG00000018613 SOGA1 (ENSTMTG00000018547) ACSS2 (ENSTMTG00000018480) GSS (ENSTMTG00000018443) MYH7B (ENSTMTG00000018334) TRPC4AP (ENSTMTG00000018290) EDEM2 (ENSTMTG00000018270) TOX2 (ENSTMTG00000018257) SNTA1 (ENSTMTG00000018232) #21 CBFA2T2 (ENSTMTG00000018209) #22 ENSTMTG00000018196 NECAB3 (ENSTMTG00000018162) #23 E2F1 (ENSTMTG00000018143) #26 PXMP4 (ENSTMTG00000018136) #27 ZNF341 (ENSTMTG00000018098) #29 CHMP4B (ENSTMTG00000018087) #30 ENSTMTG00000018045 RALY (ENSTMTG00000018027) #32 EIF2S2 (ENSTMTG00000018010) #34 ASIP (ENSTMTG00000017959) #33 AHCY (ENSTMTG00000017923) #36 ITCH (ENSTMTG00000017861) #37 DYNLRB1 (ENSTMTG00000017842) MAP1LC3A (ENSTMTG00000017835) PIGU (ENSTMTG00000017811) Chinese turtle MODERN SPECIES 1953 ENSPSIG00000008084 #21 CBFA2T2 (ENSPSIG00000006165) #22 Archosauria ANCESTRAL SPECIES 13 ENSGT00950000186009 ENSGT00940000162174 ENSGT00490000043380 ENSGT00940000153776.a.b ENSGT00390000011581 ENSGT00940000156091.b ENSGT00940000155326 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Australian saltwater crocodile MODERN SPECIES 41 ENSCPRG00005012455 ARHGAP40 (ENSCPRG00005012456) SGK2 (ENSCPRG00005012467) IFT52 (ENSCPRG00005012475) MYBL2 (ENSCPRG00005012490) ENSCPRG00005012518 ENSCPRG00005012521 ENSCPRG00005012528 ENSCPRG00005012542 TRPC4AP (ENSCPRG00005012634) EDEM2 (ENSCPRG00005012648) ENSCPRG00005012655 ENSCPRG00005012691 TOX2 (ENSCPRG00005012700) SNTA1 (ENSCPRG00005012705) #21 CBFA2T2 (ENSCPRG00005012718) #22 NECAB3 (ENSCPRG00005012733) #23 ENSCPRG00005012740 ACTL10 (ENSCPRG00005012747) #25 E2F1 (ENSCPRG00005012754) #26 PXMP4 (ENSCPRG00005012758) #27 ZNF341 (ENSCPRG00005012761) #29 CHMP4B (ENSCPRG00005012772) #30 ENSCPRG00005012778 RALY (ENSCPRG00005012788) #32 EIF2S2 (ENSCPRG00005012797) #34 ASIP (ENSCPRG00005012814) #33 AHCY (ENSCPRG00005012824) #36 ITCH (ENSCPRG00005012830) #37 DYNLRB1 (ENSCPRG00005012837) MAP1LC3A (ENSCPRG00005012842) Aves ANCESTRAL SPECIES 16 ENSGT00950000186009 ENSGT00940000162174 ENSGT00490000043380 ENSGT00940000153776.a.b ENSGT00390000011581 ENSGT00940000156091.b ENSGT00940000155326 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00940000158315 Neognathae ANCESTRAL SPECIES 16 ENSGT00950000186009 ENSGT00940000162174 ENSGT00490000043380 ENSGT00940000153776.a.b ENSGT00390000011581 ENSGT00940000156091.b ENSGT00940000155326 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00940000158315 Galloanserae ANCESTRAL SPECIES 15 ENSGT00950000186009 ENSGT00940000162174 ENSGT00490000043380 ENSGT00940000153776.a.b ENSGT00390000011581 ENSGT00940000156091.b ENSGT00940000155326 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.bb #30 ENSGT00940000154663.cb #30 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00940000158315 Anatidae ANCESTRAL SPECIES 22 ENSGT00950000186009 ENSGT00940000162174 ENSGT00490000043380 ENSGT00940000153776.a.b ENSGT00390000011581 ENSGT00940000156091.b ENSGT00940000155326 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.cb #30 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00390000005197.b ENSGT00940000157086.b ENSGT01020000230603 ENSGT00940000160096 ENSGT00940000159787 Pink-footed goose MODERN SPECIES 10 PTPRT (ENSABRG00000017288) SOGA1 (ENSABRG00000017382) ACSS2 (ENSABRG00000017432) GSS (ENSABRG00000017463) ENSABRG00000017810 ENSABRG00000018576 TRPC4AP (ENSABRG00000018584) EDEM2 (ENSABRG00000018594) TOX2 (ENSABRG00000018605) SNTA1 (ENSABRG00000018613) #21 CBFA2T2 (ENSABRG00000018621) #22 NECAB3 (ENSABRG00000018624) #23 E2F1 (ENSABRG00000018627) #26 PXMP4 (ENSABRG00000018629) #27 ZNF341 (ENSABRG00000018632) #29 ENSABRG00000018638 #30 ENSABRG00000018650 RALY (ENSABRG00000018676) #32 EIF2S2 (ENSABRG00000018685) #34 ASIP (ENSABRG00000018698) #33 AHCY (ENSABRG00000018714) #36 RBPJL (ENSABRG00000018726) MATN4 (ENSABRG00000018746) ENSABRG00000018749 KCNS1 (ENSABRG00000018756) STK4 (ENSABRG00000018758) Duck MODERN SPECIES 12 ENSAPLG00000023291 ARHGAP40 (ENSAPLG00000007202) SLC32A1 (ENSAPLG00000007083) SGK2 (ENSAPLG00000006291) IFT52 (ENSAPLG00000005680) MYBL2 (ENSAPLG00000005213) ENSAPLG00000002683 ENSAPLG00000023177 ACSS2 (ENSAPLG00000015932) GSS (ENSAPLG00000015589) ENSAPLG00000011220 TRPC4AP (ENSAPLG00000009980) EDEM2 (ENSAPLG00000009712) TOX2 (ENSAPLG00000009436) SNTA1 (ENSAPLG00000030952) #21 CBFA2T2 (ENSAPLG00000011108) #22 NECAB3 (ENSAPLG00000011538) #23 PXMP4 (ENSAPLG00000012234) #27 ZNF341 (ENSAPLG00000012237) #29 CHMP4B (ENSAPLG00000012481) #30 ENSAPLG00000012568 RALY (ENSAPLG00000012983) #32 EIF2S2 (ENSAPLG00000013245) #34 ASIP (ENSAPLG00000007960) #33 AHCY (ENSAPLG00000007974) #36 RBPJL (ENSAPLG00000008031) MATN4 (ENSAPLG00000008140) ENSAPLG00000017021 KCNS1 (ENSAPLG00000027411) STK4 (ENSAPLG00000008260) ENSAPLG00000008374 Phasianidae ANCESTRAL SPECIES 15 ENSGT01070000257249 ENSGT00940000162174 ENSGT00490000043380 ENSGT00940000153776.a.b ENSGT00390000011581 ENSGT00940000156091.b ENSGT00940000155326 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233.a.a ENSGT00940000158764.b ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.bb #30 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00940000158315 ENSGT00390000015972 Phasianidae_b ANCESTRAL SPECIES 15 ENSGT01070000257249 ENSGT00940000162174 ENSGT00490000043380 ENSGT00940000153776.a.b ENSGT00390000011581 ENSGT00940000156091.b ENSGT00940000155326 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233.a.a ENSGT00940000158764.b ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663.bb #30 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00940000158315 ENSGT00390000015972 Chicken MODERN SPECIES 12 ARHGAP40 (ENSGALG00010023712) SLC32A1 (ENSGALG00010023684) SGK2 (ENSGALG00010023673) IFT52 (ENSGALG00010023627) MYBL2 (ENSGALG00010023572) ENSGALG00010025008 PTPRT (ENSGALG00010023545) SOGA1 (ENSGALG00010023482) ACSS2 (ENSGALG00010023439) GSS (ENSGALG00010023412) MYH7B (ENSGALG00010022684) TRPC4AP (ENSGALG00010022664) EDEM2 (ENSGALG00010024363) TOX2 (ENSGALG00010022169) SNTA1 (ENSGALG00010022144) #21 CBFA2T2 (ENSGALG00010022125) #22 NECAB3 (ENSGALG00010025413) #23 E2F1 (ENSGALG00010022055) #26 PXMP4 (ENSGALG00010022044) #27 ZNF341 (ENSGALG00010022030) #29 CHMP4B (ENSGALG00010024392) #30 ENSGALG00010024375 RALY (ENSGALG00010024769) #32 EIF2S2 (ENSGALG00010024754) #34 ASIP (ENSGALG00010024739) #33 AHCY (ENSGALG00010024732) #36 ITCH (ENSGALG00010024723) #37 ENSGALG00010024707 ENSGALG00010024685 DYNLRB1 (ENSGALG00010024672) MAP1LC3A (ENSGALG00010024665) Turkey MODERN SPECIES 14 ENSMGAG00000015531 ADA (ENSMGAG00000003859) ENSMGAG00000003949 ENSMGAG00000003874 ENSMGAG00000003970 R3HDML (ENSMGAG00000004016) ENSMGAG00000004044 ENSMGAG00000004039 ENSMGAG00000017841 ENSMGAG00000002459 ENSMGAG00000002444 #30 ENSMGAG00000002423 #29 ENSMGAG00000002408 #27 ENSMGAG00000020478 E2F1 (ENSMGAG00000002385) #26 ENSMGAG00000002276 #22 ENSMGAG00000002364 #23 ENSMGAG00000020439 #21 ENSMGAG00000002485 ENSMGAG00000022366 ENSMGAG00000002533 ENSMGAG00000002490 ENSMGAG00000002621 ENSMGAG00000000789 ENSMGAG00000002583 ENSMGAG00000000775 RALY (ENSMGAG00000002214) #32 EIF2S2 (ENSMGAG00000002174) #34 ASIP (ENSMGAG00000002166) #33 AHCY (ENSMGAG00000002143) #36 ITCH (ENSMGAG00000002065) #37 Japanese quail MODERN SPECIES 12 SLC32A1 (ENSCJPG00005020841) SGK2 (ENSCJPG00005020840) IFT52 (ENSCJPG00005020839) MYBL2 (ENSCJPG00005020838) PTPRT (ENSCJPG00005020739) SOGA1 (ENSCJPG00005020720) ACSS2 (ENSCJPG00005020717) GSS (ENSCJPG00005020716) ENSCJPG00005020708 TRPC4AP (ENSCJPG00005020696) ENSCJPG00005020693 ENSCJPG00005020692 ENSCJPG00005020691 TOX2 (ENSCJPG00005020690) SNTA1 (ENSCJPG00005020689) #21 CBFA2T2 (ENSCJPG00005020688) #22 NECAB3 (ENSCJPG00005020686) #23 E2F1 (ENSCJPG00005020685) #26 PXMP4 (ENSCJPG00005020684) #27 ZNF341 (ENSCJPG00005020682) #29 CHMP4B (ENSCJPG00005020680) #30 ENSCJPG00005020678 RALY (ENSCJPG00005020667) #32 EIF2S2 (ENSCJPG00005020665) #34 ASIP (ENSCJPG00005020663) #33 AHCY (ENSCJPG00005020661) #36 ITCH (ENSCJPG00005020530) #37 ENSCJPG00005020529 ENSCJPG00005020528 MAP1LC3A (ENSCJPG00005020526) MMP24 (ENSCJPG00005020525) Neognathae_b ANCESTRAL SPECIES 17 ENSGT00950000186009 ENSGT00940000162174 ENSGT00490000043380 ENSGT00940000153776.a.b ENSGT00390000011581 ENSGT00940000156091.b ENSGT00940000155326 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00940000158315 Passeriformes ANCESTRAL SPECIES 19 ENSGT00950000186009 ENSGT00940000162174 ENSGT00490000043380 ENSGT00940000153776.a.b ENSGT00390000011581 ENSGT00940000156091.b ENSGT00940000155326 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00940000171155 Passeriformes_d ANCESTRAL SPECIES 19 ENSGT00950000186009 ENSGT00940000162174 ENSGT00490000043380 ENSGT00940000153776.a.b ENSGT00390000011581 ENSGT00940000156091.b ENSGT00940000155326 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601.fb #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00940000171155 ENSGT00940000161056.b Flycatcher MODERN SPECIES 12 ENSFALG00000005684 SGK2 (ENSFALG00000005698) ENSFALG00000005735 MYBL2 (ENSFALG00000005745) ENSFALG00000005753 ENSFALG00000005767 ENSFALG00000005787 GSS (ENSFALG00000022988) ENSFALG00000005834 TRPC4AP (ENSFALG00000005846) ENSFALG00000005853 ENSFALG00000023711 ENSFALG00000024458 ENSFALG00000005857 SNTA1 (ENSFALG00000005861) #21 CBFA2T2 (ENSFALG00000005880) #22 ENSFALG00000024659 ACTL10 (ENSFALG00000014485) #25 ENSFALG00000005907 #23 ENSFALG00000005914 #26 PXMP4 (ENSFALG00000005928) #27 ZNF341 (ENSFALG00000005944) #29 CHMP4B (ENSFALG00000005962) #30 ENSFALG00000026368 #32 EIF2S2 (ENSFALG00000010608) #34 ASIP (ENSFALG00000025930) #33 AHCY (ENSFALG00000010589) #36 ENSFALG00000027527 ENSFALG00000012779 ENSFALG00000025812 EPB41L1 (ENSFALG00000012755) Passeriformes_g ANCESTRAL SPECIES 19 ENSGT00950000186009 ENSGT00940000162174 ENSGT00490000043380 ENSGT00940000153776.a.b ENSGT00390000011581 ENSGT00940000156091.b ENSGT00940000155326 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601.fb #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00940000171155.c ENSGT00940000161056.b Passeroidea ANCESTRAL SPECIES 18 ENSGT00950000186009 ENSGT00940000162174 ENSGT00490000043380 ENSGT00940000153776.a.b ENSGT00390000011581 ENSGT00940000156091.b ENSGT00940000155326 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601.fb #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00940000160455 ENSGT00940000171155.d.b Zebra finch MODERN SPECIES 13 ARHGAP40 (ENSTGUG00000004541) SLC32A1 (ENSTGUG00000004537) SGK2 (ENSTGUG00000004480) IFT52 (ENSTGUG00000004454) MYBL2 (ENSTGUG00000004426) PTPRT (ENSTGUG00000004341) SOGA1 (ENSTGUG00000004310) ACSS2 (ENSTGUG00000004272) GSS (ENSTGUG00000004252) ENSTGUG00000003883 TRPC4AP (ENSTGUG00000003820) EDEM2 (ENSTGUG00000003813) TOX2 (ENSTGUG00000024441) SNTA1 (ENSTGUG00000003805) #21 ENSTGUG00000025881 CBFA2T2 (ENSTGUG00000003776) #22 ENSTGUG00000020460 #25 NECAB3 (ENSTGUG00000003767) #23 E2F1 (ENSTGUG00000028557) #26 PXMP4 (ENSTGUG00000019081) #27 ZNF341 (ENSTGUG00000003745) #29 CHMP4B (ENSTGUG00000003739) #30 ENSTGUG00000003727 RALY (ENSTGUG00000003715) #32 EIF2S2 (ENSTGUG00000024815) #34 ASIP (ENSTGUG00000019882) #33 AHCY (ENSTGUG00000003666) #36 MMP24 (ENSTGUG00000003646) EIF6 (ENSTGUG00000024120) UQCC1 (ENSTGUG00000003601) ENSTGUG00000022461 Common canary MODERN SPECIES 21 ENSSCAG00000012195 ARHGAP40 (ENSSCAG00000012178) SLC32A1 (ENSSCAG00000012166) SGK2 (ENSSCAG00000012152) IFT52 (ENSSCAG00000012142) MYBL2 (ENSSCAG00000012134) PTPRT (ENSSCAG00000009769) SOGA1 (ENSSCAG00000009234) ACSS2 (ENSSCAG00000008852) GSS (ENSSCAG00000008801) ENSSCAG00000008445 TRPC4AP (ENSSCAG00000008405) EDEM2 (ENSSCAG00000008399) TOX2 (ENSSCAG00000008392) SNTA1 (ENSSCAG00000008383) #21 CBFA2T2 (ENSSCAG00000008377) #22 ACTL10 (ENSSCAG00000008374) #25 NECAB3 (ENSSCAG00000008372) #23 E2F1 (ENSSCAG00000008365) #26 PXMP4 (ENSSCAG00000008359) #27 ZNF341 (ENSSCAG00000008321) #29 CHMP4B (ENSSCAG00000008301) #30 RALY (ENSSCAG00000008287) #32 EIF2S2 (ENSSCAG00000008277) #34 ASIP (ENSSCAG00000008252) #33 AHCY (ENSSCAG00000008244) #36 ITCH (ENSSCAG00000008233) #37 DYNLRB1 (ENSSCAG00000008227) MAP1LC3A (ENSSCAG00000008224) Medium ground finch MODERN SPECIES 261 TOX2 (ENSGFOG00000005826) SNTA1 (ENSGFOG00000005847) #21 CBFA2T2 (ENSGFOG00000006230) #22 ENSGFOG00000006238 #25 ENSGFOG00000006244 #23 E2F1 (ENSGFOG00000006251) #26 PXMP4 (ENSGFOG00000006264) #27 ZNF341 (ENSGFOG00000006272) #29 CHMP4B (ENSGFOG00000002598) #30 ENSGFOG00000002622 Great tit MODERN SPECIES 12 ARHGAP40 (ENSPMJG00000002928) SLC32A1 (ENSPMJG00000002922) SGK2 (ENSPMJG00000002883) IFT52 (ENSPMJG00000002877) MYBL2 (ENSPMJG00000002868) PTPRT (ENSPMJG00000002773) SOGA1 (ENSPMJG00000002632) ACSS2 (ENSPMJG00000002589) GSS (ENSPMJG00000002581) ENSPMJG00000002555 TRPC4AP (ENSPMJG00000002524) EDEM2 (ENSPMJG00000002496) TOX2 (ENSPMJG00000002480) SNTA1 (ENSPMJG00000002437) #21 ENSPMJG00000002424 CBFA2T2 (ENSPMJG00000002396) #22 ACTL10 (ENSPMJG00000002387) #25 NECAB3 (ENSPMJG00000002376) #23 E2F1 (ENSPMJG00000002326) #26 ZNF341 (ENSPMJG00000002302) #29 CHMP4B (ENSPMJG00000002283) #30 ENSPMJG00000002264 ENSPMJG00000002258 RALY (ENSPMJG00000002234) #32 EIF2S2 (ENSPMJG00000002209) #34 ASIP (ENSPMJG00000002109) #33 AHCY (ENSPMJG00000002096) #36 ENSPMJG00000002089 ENSPMJG00000002059 ENSPMJG00000002055 MMP24 (ENSPMJG00000002049) Neognathae_c ANCESTRAL SPECIES 20 ENSGT00950000186009 ENSGT00940000162174 ENSGT00490000043380 ENSGT00940000153776.a.b ENSGT00390000011581 ENSGT00940000156091.b ENSGT00940000155326 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00940000158315 Kakapo MODERN SPECIES 5 TOP1 (ENSSHBG00005006987) PLCG1 (ENSSHBG00005007241) ZHX3 (ENSSHBG00005008409) LPIN3 (ENSSHBG00005008414) EMILIN3 (ENSSHBG00005008424) ENSSHBG00005008453 ENSSHBG00005008462 SOGA1 (ENSSHBG00005008471) ACSS2 (ENSSHBG00005008484) GSS (ENSSHBG00005008492) ENSSHBG00005008524 TRPC4AP (ENSSHBG00005008644) EDEM2 (ENSSHBG00005008654) TOX2 (ENSSHBG00005008660) SNTA1 (ENSSHBG00005008668) #21 CBFA2T2 (ENSSHBG00005008694) #22 NECAB3 (ENSSHBG00005008836) #23 ACTL10 (ENSSHBG00005008845) #25 E2F1 (ENSSHBG00005008851) #26 PXMP4 (ENSSHBG00005008859) #27 ZNF341 (ENSSHBG00005008883) #29 CHMP4B (ENSSHBG00005009015) #30 ENSSHBG00005009032 RALY (ENSSHBG00005009054) #32 EIF2S2 (ENSSHBG00005009063) #34 ASIP (ENSSHBG00005009077) #33 AHCY (ENSSHBG00005009088) #36 ITCH (ENSSHBG00005009097) #37 DYNLRB1 (ENSSHBG00005009106) MMP24 (ENSSHBG00005009131) EIF6 (ENSSHBG00005009143) Golden eagle MODERN SPECIES 19 ARHGAP40 (ENSACCG00020000449) SLC32A1 (ENSACCG00020000471) SGK2 (ENSACCG00020000501) IFT52 (ENSACCG00020000543) MYBL2 (ENSACCG00020000610) ENSACCG00020000632 PTPRT (ENSACCG00020001463) SOGA1 (ENSACCG00020002169) ACSS2 (ENSACCG00020002220) GSS (ENSACCG00020002255) ENSACCG00020002312 TRPC4AP (ENSACCG00020002473) EDEM2 (ENSACCG00020002573) TOX2 (ENSACCG00020002591) SNTA1 (ENSACCG00020002610) #21 CBFA2T2 (ENSACCG00020002633) #22 NECAB3 (ENSACCG00020002653) #23 ENSACCG00020002662 E2F1 (ENSACCG00020002681) #26 PXMP4 (ENSACCG00020002694) #27 ZNF341 (ENSACCG00020002715) #29 CHMP4B (ENSACCG00020002728) #30 ENSACCG00020002769 RALY (ENSACCG00020002798) #32 EIF2S2 (ENSACCG00020002819) #34 ASIP (ENSACCG00020002830) #33 AHCY (ENSACCG00020002842) #36 ITCH (ENSACCG00020002861) #37 DYNLRB1 (ENSACCG00020002883) MAP1LC3A (ENSACCG00020002899) MMP24 (ENSACCG00020002909) African ostrich MODERN SPECIES 818 CBFA2T2 (ENSSCUG00000010850) #22 NECAB3 (ENSSCUG00000010854) #23 ACTL10 (ENSSCUG00000010856) #25 ENSSCUG00000010858 #26 PXMP4 (ENSSCUG00000010860) #27 ZNF341 (ENSSCUG00000010869) #29 CHMP4B (ENSSCUG00000010874) #30 ENSSCUG00000010877 ENSSCUG00000010879 RALY (ENSSCUG00000010883) #32 EIF2S2 (ENSSCUG00000010885) #34 ASIP (ENSSCUG00000010886) #33 AHCY (ENSSCUG00000010887) #36 ITCH (ENSSCUG00000010891) #37 DYNLRB1 (ENSSCUG00000010899) MAP1LC3A (ENSSCUG00000010903) Lepidosauria ANCESTRAL SPECIES 6 ENSGT00950000182872.f.a.a.b ENSGT00700000104550.a ENSGT00940000158986 ENSGT01040000241001 ENSGT00950000183202.a.a ENSGT00390000013867 ENSGT00940000161648 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00980000199297 tuatara MODERN SPECIES 1490 TOX2 (ENSSPUG00000012752) SNTA1 (ENSSPUG00000012734) #21 CBFA2T2 (ENSSPUG00000012717) #22 ACTL10 (ENSSPUG00000012708) #25 NECAB3 (ENSSPUG00000012690) #23 E2F1 (ENSSPUG00000012675) #26 PXMP4 (ENSSPUG00000012666) #27 ZNF341 (ENSSPUG00000012648) #29 CHMP4B (ENSSPUG00000012632) #30 ENSSPUG00000012622 Episquamata ANCESTRAL SPECIES 1 ENSGT00940000160331 ENSGT00950000182872.f.a.a.b ENSGT00700000104550.a ENSGT00940000158986 ENSGT00950000183202.a.a ENSGT00390000013867 ENSGT00940000161648 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00980000199297 Laterata ANCESTRAL SPECIES 14 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00980000199297 Common wall lizard MODERN SPECIES 14 ENSPMRG00000017613 ENSPMRG00000017707 ENSPMRG00000018204 ENSPMRG00000018414 ENSPMRG00000018424 SOGA1 (ENSPMRG00000018470) ACSS2 (ENSPMRG00000018560) GSS (ENSPMRG00000018774) ENSPMRG00000019018 TRPC4AP (ENSPMRG00000020462) EDEM2 (ENSPMRG00000020578) ENSPMRG00000020615 ENSPMRG00000020620 TOX2 (ENSPMRG00000020639) SNTA1 (ENSPMRG00000020670) #21 CBFA2T2 (ENSPMRG00000020681) #22 ENSPMRG00000020695 NECAB3 (ENSPMRG00000020712) #23 ACTL10 (ENSPMRG00000020723) #25 ENSPMRG00000020727 ENSPMRG00000020730 E2F1 (ENSPMRG00000020737) #26 PXMP4 (ENSPMRG00000020743) #27 ZNF341 (ENSPMRG00000020759) #29 CHMP4B (ENSPMRG00000020773) #30 ENSPMRG00000020778 RALY (ENSPMRG00000020782) #32 EIF2S2 (ENSPMRG00000020795) #34 ASIP (ENSPMRG00000020805) #33 ENSPMRG00000020811 AHCY (ENSPMRG00000020815) #36 Argentine black and white tegu MODERN SPECIES 28 NDRG3 (ENSSMRG00000002245) RALGAPB (ENSSMRG00000002234) CHD6 (ENSSMRG00000002188) RBL1 (ENSSMRG00000002155) SAMHD1 (ENSSMRG00000002105) ENSSMRG00000002097 SOGA1 (ENSSMRG00000002082) ACSS2 (ENSSMRG00000001992) GSS (ENSSMRG00000001989) ENSSMRG00000001837 ENSSMRG00000001637 TRPC4AP (ENSSMRG00000001628) EDEM2 (ENSSMRG00000001620) TOX2 (ENSSMRG00000001545) SNTA1 (ENSSMRG00000001526) #21 CBFA2T2 (ENSSMRG00000001500) #22 ACTL10 (ENSSMRG00000001490) #25 NECAB3 (ENSSMRG00000001460) #23 E2F1 (ENSSMRG00000001456) #26 PXMP4 (ENSSMRG00000001453) #27 ZNF341 (ENSSMRG00000001447) #29 CHMP4B (ENSSMRG00000001390) #30 ENSSMRG00000001388 ENSSMRG00000001318 RALY (ENSSMRG00000001280) #32 EIF2S2 (ENSSMRG00000001247) #34 ENSSMRG00000001230 ASIP (ENSSMRG00000001224) #33 ENSSMRG00000001217 AHCY (ENSSMRG00000001207) #36 ITCH (ENSSMRG00000001158) #37 Toxicofera ANCESTRAL SPECIES 1 ENSGT00940000160331 ENSGT00950000182872.f.a.a.b ENSGT00700000104550.a ENSGT00940000158986 ENSGT00950000183202.a.a ENSGT00390000013867 ENSGT00940000161648 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00980000199297 Lizard MODERN SPECIES 3 RBL1 (ENSACAG00000006847) SAMHD1 (ENSACAG00000007007) TLDC2 (ENSACAG00000007093) SOGA1 (ENSACAG00000007120) ENSACAG00000007148 ENSACAG00000007388 ENSACAG00000007497 TRPC4AP (ENSACAG00000008237) ENSACAG00000008338 ENSACAG00000010388 ENSACAG00000036722 ENSACAG00000042806 ENSACAG00000008446 ENSACAG00000043850 SNTA1 (ENSACAG00000008475) #21 CBFA2T2 (ENSACAG00000008567) #22 ENSACAG00000035390 NECAB3 (ENSACAG00000008697) #23 ENSACAG00000002219 ENSACAG00000008761 #26 ENSACAG00000037827 #26 ENSACAG00000042361 PXMP4 (ENSACAG00000008802) #27 ZNF341 (ENSACAG00000008818) #29 CHMP4B (ENSACAG00000008891) #30 ENSACAG00000038084 ENSACAG00000040646 ENSACAG00000037357 ENSACAG00000043994 RALY (ENSACAG00000008983) #32 ENSACAG00000037938 Elapidae ANCESTRAL SPECIES 1 ENSGT00940000156477 ENSGT00940000160331 ENSGT00950000182872.f.a.a.b ENSGT00700000104550.a ENSGT00940000158986 ENSGT00950000183202.a.a ENSGT00390000013867 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b.a #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00980000199297 Indian cobra MODERN SPECIES 2 CHD6 (ENSNNAG00000009784) ENSNNAG00000009298 ENSNNAG00000009289 RBL1 (ENSNNAG00000007096) SAMHD1 (ENSNNAG00000006949) ENSNNAG00000006913 SOGA1 (ENSNNAG00000006897) ACSS2 (ENSNNAG00000006792) GSS (ENSNNAG00000006759) ENSNNAG00000002064 TRPC4AP (ENSNNAG00000001268) EDEM2 (ENSNNAG00000001243) ENSNNAG00000001221 TOX2 (ENSNNAG00000001195) SNTA1 (ENSNNAG00000001177) #21 CBFA2T2 (ENSNNAG00000001161) #22 ENSNNAG00000001144 NECAB3 (ENSNNAG00000001130) #23 E2F1 (ENSNNAG00000001105) #26 PXMP4 (ENSNNAG00000001074) #27 ZNF341 (ENSNNAG00000001049) #29 CHMP4B (ENSNNAG00000001020) #30 ENSNNAG00000001010 #32 ENSNNAG00000000994 #32 EIF2S2 (ENSNNAG00000000981) #34 ASIP (ENSNNAG00000000968) #33 AHCY (ENSNNAG00000000953) #36 ITCH (ENSNNAG00000000909) #37 DYNLRB1 (ENSNNAG00000000888) MAP1LC3A (ENSNNAG00000000871) PIGU (ENSNNAG00000000795) Elapidae_a ANCESTRAL SPECIES 3 ENSGT00940000156477 ENSGT00940000160331 ENSGT00950000182872.f.a.a.b ENSGT00700000104550.a ENSGT00940000158986 ENSGT00950000183202.a.a ENSGT00390000013867 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b.a #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00530000063829.C Acanthophiinae ANCESTRAL SPECIES 2 ENSGT00940000156477 ENSGT00940000160331 ENSGT00950000182872.f.a.a.b ENSGT00700000104550.a ENSGT00940000158986 ENSGT00950000183202.a.a ENSGT00390000013867 ENSGT00950000182982.B ENSGT00940000156358 ENSGT00390000013764 ENSGT00940000160318 ENSGT00390000018330 ENSGT00940000159233 ENSGT00940000158764 ENSGT00950000182863.A.a.b.a #21 ENSGT00950000183176.a #22 ENSGT00940000162922 #25 ENSGT00950000183131.a #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000154258.a #33 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 ENSGT00530000063829.C Mainland tiger snake MODERN SPECIES 159 CBFA2T2 (ENSNSUG00000006819) #22 ACTL10 (ENSNSUG00000006816) #25 NECAB3 (ENSNSUG00000006812) #23 E2F1 (ENSNSUG00000006810) #26 PXMP4 (ENSNSUG00000006808) #27 ZNF341 (ENSNSUG00000006805) #29 CHMP4B (ENSNSUG00000006802) #30 ENSNSUG00000006800 #32 ENSNSUG00000006799 #32 EIF2S2 (ENSNSUG00000006794) #34 ASIP (ENSNSUG00000006791) #33 AHCY (ENSNSUG00000006790) #36 ITCH (ENSNSUG00000004770) #37 DYNLRB1 (ENSNSUG00000004757) MAP1LC3A (ENSNSUG00000004753) PIGU (ENSNSUG00000004739) Eastern brown snake MODERN SPECIES 8 NDRG3 (ENSPTXG00000000472) RALGAPB (ENSPTXG00000000412) ENSPTXG00000000404 CHD6 (ENSPTXG00000000268) SAMHD1 (ENSPTXG00000000069) ENSPTXG00000000040 SOGA1 (ENSPTXG00000007847) ACSS2 (ENSPTXG00000007845) GSS (ENSPTXG00000007844) ENSPTXG00000007842 TRPC4AP (ENSPTXG00000007841) EDEM2 (ENSPTXG00000007840) ENSPTXG00000007839 TOX2 (ENSPTXG00000007838) SNTA1 (ENSPTXG00000007837) #21 CBFA2T2 (ENSPTXG00000007823) #22 ACTL10 (ENSPTXG00000007822) #25 NECAB3 (ENSPTXG00000007818) #23 E2F1 (ENSPTXG00000007817) #26 PXMP4 (ENSPTXG00000007816) #27 ZNF341 (ENSPTXG00000007815) #29 CHMP4B (ENSPTXG00000007814) #30 ENSPTXG00000007812 #32 ENSPTXG00000007811 #32 EIF2S2 (ENSPTXG00000007809) #34 ASIP (ENSPTXG00000007806) #33 AHCY (ENSPTXG00000007803) #36 ITCH (ENSPTXG00000007800) #37 DYNLRB1 (ENSPTXG00000007798) MAP1LC3A (ENSPTXG00000007795) PIGU (ENSPTXG00000007794) Blue-lipped sea krait MODERN SPECIES 4784 ENSLLTG00000015481 #22 ENSLLTG00000015479 ##22 Anura ANCESTRAL SPECIES 50 ENSGT00390000013867 ENSGT00950000183202.a.a ENSGT00940000158986 ENSGT00700000104550.a ENSGT00940000158764 ENSGT00940000168101.a ENSGT00950000182863.A.a.b #21 ENSGT00390000018558 ENSGT00950000183176.a #22 ENSGT01070000255540 ENSGT00950000183131.a.c #23 ENSGT00950000183131.a.d #23 ENSGT00940000159472 #26 ENSGT00390000001562 #27 ENSGT00390000000546 #29 ENSGT00940000154663 #30 ENSGT00940000157601 #32 ENSGT00390000001804 #34 ENSGT00940000176173 ENSGT00950000182981.a #36 ENSGT00940000157014 #37 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000014941 Leishan spiny toad MODERN SPECIES 3 ENSLLEG00000026819 RAB22A (ENSLLEG00000027003) ENSLLEG00000027127 VAPB (ENSLLEG00000027149) APCDD1L (ENSLLEG00000027178) STX16 (ENSLLEG00000027234) NPEPL1 (ENSLLEG00000027415) ENSLLEG00000027554 ENSLLEG00000027654 ENSLLEG00000027708 GNAS (ENSLLEG00000027778) ENSLLEG00000028306 NELFCD (ENSLLEG00000028355) CTSZ (ENSLLEG00000028583) PIGT (ENSLLEG00000028639) CBFA2T2 (ENSLLEG00000028694) #22 ENSLLEG00000028809 NECAB3 (ENSLLEG00000028857) #23 ENSLLEG00000028928 E2F1 (ENSLLEG00000028940) #26 PXMP4 (ENSLLEG00000028972) #27 ZNF341 (ENSLLEG00000028995) #29 CHMP4B (ENSLLEG00000029024) #30 RALY (ENSLLEG00000029052) #32 ENSLLEG00000029071 EIF2S2 (ENSLLEG00000029102) #34 DIDO1 (ENSLLEG00000029275) ENSLLEG00000029306 TCFL5 (ENSLLEG00000029320) ENSLLEG00000029342 ENSLLEG00000029403 Frog MODERN SPECIES 1 ergic3 (ENSXETG00000007419) ENSXETG00000040827 samhd1 (ENSXETG00000007416) ENSXETG00000046162 ENSXETG00000038789 ENSXETG00000045039 rbl1 (ENSXETG00000007414) chd6 (ENSXETG00000021445) ENSXETG00000038070 ralgapb (ENSXETG00000021438) tox2 (ENSXETG00000021435) tigd3 (ENSXETG00000034340) snta1 (ENSXETG00000021433) #21 ENSXETG00000034447 pigt (ENSXETG00000021432) cbfa2t2 (ENSXETG00000021431) #22 ENSXETG00000031462 #23 ENSXETG00000037342 #23 e2f1 (ENSXETG00000046118) #26 pxmp4 (ENSXETG00000042606) #27 znf341 (ENSXETG00000021426) #29 chmp4b (ENSXETG00000043359) #30 ENSXETG00000045900 raly (ENSXETG00000019514) #32 asip (ENSXETG00000044164) eif2s2 (ENSXETG00000019507) #34 dynlrb1 (ENSXETG00000019475) #37 ahcy (ENSXETG00000019486) #36 map1lc3a (ENSXETG00000019473) pigu (ENSXETG00000019472) tp53inp2 (ENSXETG00000046826) Coelacanth MODERN SPECIES 961 TOX2 (ENSLACG00000012232) ENSLACG00000011487 SNTA1 (ENSLACG00000010986) #21 CBFA2T2 (ENSLACG00000009564) #22 NECAB3 (ENSLACG00000008280) #23 E2F1 (ENSLACG00000006930) #26 PXMP4 (ENSLACG00000006704) #27 ZNF341 (ENSLACG00000006139) #29 CHMP4B (ENSLACG00000005330) #30 ENSLACG00000002082 Actinopterygii ANCESTRAL SPECIES 62 ENSGT00950000183149.B ENSGT00940000160694 ENSGT00410000025596.a.a ENSGT01030000234597.a.b.b.f ENSGT00950000182970.A.b ENSGT00940000162635 ENSGT00940000156407 ENSGT00390000000732 ENSGT00940000159329 ENSGT00940000160093 ENSGT00940000159925 ENSGT00700000104550.a.j ENSGT00940000158764 ENSGT00940000155581.A ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00390000000546 #29 ENSGT00390000001562 #27 ENSGT00940000159472 #26 Reedfish MODERN SPECIES 1 lhx4 (ENSECRG00000008106) acbd6 (ENSECRG00000008080) xpr1b (ENSECRG00000008065) stx6 (ENSECRG00000008046) ier5 (ENSECRG00000008036) ENSECRG00000007998 osbp (ENSECRG00000007946) patl1 (ENSECRG00000007912) cebpb (ENSECRG00000007895) peds1 (ENSECRG00000007882) ube2v1 (ENSECRG00000007775) tcf15 (ENSECRG00000007740) itcha (ENSECRG00000007713) #37 VSTM2L (ENSECRG00000007701) ctnnbl1 (ENSECRG00000007678) cbfa2t2 (ENSECRG00000007661) #22 znf341 (ENSECRG00000007631) #29 pxmp4 (ENSECRG00000007618) #27 E2F1 (ENSECRG00000007605) #26 ENSECRG00000007598 SNTA1 (ENSECRG00000007587) #21 tox2 (ENSECRG00000007562) TIMM10B (ENSECRG00000007555) RALGAPB (ENSECRG00000007540) PREX1 (ENSECRG00000007494) kcnq2a (ENSECRG00000007454) chrna4b (ENSECRG00000006928) zgpat (ENSECRG00000006855) arfrp1 (ENSECRG00000006843) TNFRSF6B (ENSECRG00000006833) dtx4a (ENSECRG00000006825) Neopterygii ANCESTRAL SPECIES 44 ENSGT00940000160694.h ENSGT00940000160694.g ENSGT00410000025596.a.a ENSGT01030000234597.a.b.b.f ENSGT00950000182970.A.b ENSGT00940000162635 ENSGT00940000156407 ENSGT00390000000732 ENSGT00940000159329 ENSGT00940000160093 ENSGT00940000159925 ENSGT00700000104550.a.j ENSGT00940000158764 ENSGT00940000155581.A ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a #23 ENSGT00940000157014 #37 ENSGT00390000000546 #29 ENSGT00390000001562 #27 ENSGT00940000159472 #26 ENSGT01050000244866.D.b.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B.c.b ENSGT00940000162507.B ENSGT01050000244866.B.c.a ENSGT00940000165533 ENSGT00940000155308 Spotted gar MODERN SPECIES 656 RALGAPB (ENSLOCG00000000654) ENSLOCG00000000690 tox2 (ENSLOCG00000000720) ENSLOCG00000000750 SNTA1 (ENSLOCG00000000786) #21 cbfa2t2 (ENSLOCG00000000816) #22 NECAB3 (ENSLOCG00000000865) #23 itcha (ENSLOCG00000000888) #37 znf341 (ENSLOCG00000000947) #29 pxmp4 (ENSLOCG00000000996) #27 E2F1 (ENSLOCG00000001016) #26 tgm5l (ENSLOCG00000001036) ctnnbl1 (ENSLOCG00000001069) VSTM2L (ENSLOCG00000001095) TTI1 (ENSLOCG00000001130) rprd1b (ENSLOCG00000001144) tgm2b (ENSLOCG00000001167) ENSLOCG00000001193 DLGAP4 (ENSLOCG00000001238) ENSLOCG00000001261 myl9a (ENSLOCG00000001277) Osteoglossocephalai ANCESTRAL SPECIES 67 ENSGT00530000063106.A ENSGT00940000163473.j ENSGT00940000160694.g.a ENSGT00410000025596.a.a ENSGT01030000234597.a.b.b.f ENSGT00950000182970.A.b ENSGT00940000162635 ENSGT00940000155167.a ENSGT00390000000732 ENSGT00940000159329 ENSGT00940000160093.b ENSGT00940000159925 ENSGT00700000104550.a.j.b ENSGT00940000158764 ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000157014 #37 ENSGT00390000000546 #29 ENSGT00390000001562 #27 ENSGT00940000159472 #26 ENSGT01050000244866.D.b.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B.c.b ENSGT00940000162507.B ENSGT01050000244866.B.c.a ENSGT00940000165533 ENSGT00940000155308.d Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 17 ENSGT00940000155094.a ENSGT00390000006008 ENSGT00950000183149.B.b ENSGT00940000160694.h ENSGT00940000160694.g.a ENSGT00410000025596.a.a ENSGT01030000234597.a.b.b.f.h ENSGT00940000156407 ENSGT00940000160093.a ENSGT00700000104550.a.j.a.a ENSGT00700000104550.a.j.a.b ENSGT00940000158764.e ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000157014.h #37 ENSGT01050000244866.D.b.a ENSGT00940000159381.b ENSGT00950000183094.b.a.p ENSGT01050000244866.B.c.a ENSGT00940000165533.a ENSGT00940000155308.d ENSGT00940000155230.b.b.b.a ENSGT00940000155458.c.a ENSGT00940000160046 ENSGT00390000016807.b ENSGT00390000000903.b.a ENSGT01010000223084 ENSGT01050000244850.A.b.a.a P. kingsleyae MODERN SPECIES 308 RALGAPB (ENSPKIG00000010870) tox2 (ENSPKIG00000010730) SNTA1 (ENSPKIG00000010628) #21 cbfa2t2 (ENSPKIG00000010565) #22 ITCH (ENSPKIG00000010515) #37 tgm5l (ENSPKIG00000010469) VSTM2L (ENSPKIG00000010454) RPRD1B (ENSPKIG00000010430) tgm2b (ENSPKIG00000010396) DLGAP4 (ENSPKIG00000010318) ENSPKIG00000010277 myl9b (ENSPKIG00000010247) LPIN3 (ENSPKIG00000010167) tpra1 (ENSPKIG00000010098) ENSPKIG00000010064 Asian bonytongue MODERN SPECIES 14 arhgef3 (ENSSFOG00015032625) il17rd (ENSSFOG00015020761) HESX1 (ENSSFOG00015020712) ENSSFOG00015020619 ENSSFOG00015020601 ENSSFOG00015020597 HELZ2 (ENSSFOG00015020580) GMEB2 (ENSSFOG00015020551) STMN3 (ENSSFOG00015020531) arfrp1 (ENSSFOG00015020500) CHRNA4 (ENSSFOG00015020486) KCNQ2 (ENSSFOG00015020469) RALGAPB (ENSSFOG00015020305) tox2 (ENSSFOG00015020204) SNTA1 (ENSSFOG00015020141) #21 cbfa2t2 (ENSSFOG00015020083) #22 ENSSFOG00015031799 #23 ENSSFOG00015025239 #23 ITCH (ENSSFOG00015019968) #37 tgm5l (ENSSFOG00015019930) VSTM2L (ENSSFOG00015019919) rprd1b (ENSSFOG00015019874) tgm2b (ENSSFOG00015019841) ENSSFOG00015019791 ENSSFOG00015019751 ENSSFOG00015032394 ENSSFOG00015031459 DLGAP4 (ENSSFOG00015019695) ENSSFOG00015019684 myl9b (ENSSFOG00015019678) LPIN3 (ENSSFOG00015019641) Osteoglossiformes ANCESTRAL SPECIES 228 ENSGT00940000163299.A.b.c.b ENSGT00940000165254.c.b.f ENSGT00940000166720 ENSGT00390000008714.a ENSGT00940000162660.a ENSGT00940000158549 ENSGT00940000155311.C.d ENSGT00940000164248.b.a ENSGT00940000153541.B.f ENSGT00940000161969.k ENSGT00390000016016.B ENSGT00950000182945.b.a.a.a.b.b ENSGT00390000003022 ENSGT00940000155581.A ENSGT00950000183176.a.b #22 ENSGT00950000183131.a.e #23 ENSGT00940000157014.g #37 ENSGT00390000000546 #29 ENSGT00390000001562 #27 ENSGT00940000159472 #26 ENSGT00390000006931 ENSGT00940000159381.a ENSGT00390000009748 ENSGT00950000183094.b.a.o ENSGT01050000244866.B.c.b ENSGT00940000165533.b Asian bonytongue MODERN SPECIES 10 MYLK4 (ENSSFOG00015014044) serpinb1 (ENSSFOG00015031077) ENSSFOG00015014090 ENSSFOG00015028260 maf1b (ENSSFOG00015014127) shrprbck1r (ENSSFOG00015014150) B4GALT3 (ENSSFOG00015014175) bgna (ENSSFOG00015014196) si:dkey-6n6.1 (ENSSFOG00015014241) tktb (ENSSFOG00015014262) tpk2 (ENSSFOG00015014311) ENSSFOG00015014338 ndufb11 (ENSSFOG00015032071) uba1 (ENSSFOG00015014366) SLC7A5 (ENSSFOG00015014487) ENSSFOG00015014510 #22 NECAB3 (ENSSFOG00015014544) #23 itcha (ENSSFOG00015014587) #37 znf341 (ENSSFOG00015014678) #29 pxmp4 (ENSSFOG00015014711) #27 E2F1 (ENSSFOG00015014719) #26 ctnnbl1 (ENSSFOG00015014743) VSTM2L (ENSSFOG00015014771) TTI1 (ENSSFOG00015014779) tgm2a (ENSSFOG00015014823) ENSSFOG00015015078 DLGAP4 (ENSSFOG00015015142) ENSSFOG00015025668 myl9b (ENSSFOG00015028858) ENSSFOG00015032159 tpra1 (ENSSFOG00015015214) P. kingsleyae MODERN SPECIES 90 ENSPKIG00000024429 ENSPKIG00000024420 ENSPKIG00000024408 ENSPKIG00000024388 atp2b3a (ENSPKIG00000024312) dedd (ENSPKIG00000024245) si:ch211-229n2.6 (ENSPKIG00000024225) B4GALT3 (ENSPKIG00000024219) bgna (ENSPKIG00000024209) si:dkey-6n6.1 (ENSPKIG00000024196) tnnc1b (ENSPKIG00000024186) tktb (ENSPKIG00000024155) ENSPKIG00000024104 ndufb11 (ENSPKIG00000024094) SLC7A5 (ENSPKIG00000024084) ENSPKIG00000024059 #22 ENSPKIG00000024031 #23 itchb (ENSPKIG00000023985) #37 znf341 (ENSPKIG00000023946) #29 pxmp4 (ENSPKIG00000023929) #27 E2F1 (ENSPKIG00000023922) #26 ctnnbl1 (ENSPKIG00000023902) VSTM2L (ENSPKIG00000023894) TTI1 (ENSPKIG00000023886) rprd1b (ENSPKIG00000023874) ENSPKIG00000023856 Clupeocephala ANCESTRAL SPECIES 198 ENSGT00940000156407 ENSGT00940000160093.a ENSGT00700000104550.a.j.b ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000157014.f #37 ENSGT00390000001562 #27 ENSGT00940000159381.d ENSGT01050000244866.B.c.a ENSGT00940000165533.c ENSGT00940000155308.d ENSGT00940000159849 ENSGT00940000155458 ENSGT00940000160046 ENSGT00940000165151.b ENSGT00390000016807 ENSGT00390000000903.b.a ENSGT01050000244850.A.b.b ENSGT00940000159178 Otomorpha ANCESTRAL SPECIES 179 ENSGT00530000063106.A.s.a.b ENSGT00940000160694.g.a ENSGT01030000234597.a.b.b.f ENSGT00940000156407 ENSGT00940000160093.a ENSGT00700000104550.a.j.b ENSGT00940000158764.g ENSGT00940000163999.a ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000157014.f #37 ENSGT00390000001562 #27 ENSGT01050000244866.D.b.a ENSGT00940000159381.d ENSGT01050000244866.B.c.a ENSGT00940000165533.c ENSGT00940000155308.d ENSGT00940000159849 ENSGT00940000155458.e.a ENSGT00940000160046 ENSGT00940000165151.b ENSGT00390000016807 ENSGT00390000000903.b.a ENSGT01050000244850.A.b.a.a Clupeiformes ANCESTRAL SPECIES 140 ENSGT00940000160093.a ENSGT00700000104550.a.j.b ENSGT00940000158764.g ENSGT00940000163999.a ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000157014.f #37 ENSGT00390000001562 #27 ENSGT01050000244866.D.b.a ENSGT00940000159381.d ENSGT01050000244866.B.c.a ENSGT00940000165533.c ENSGT00940000155308.d ENSGT00940000159849 ENSGT00940000155458.e.a ENSGT00940000160046 ENSGT00940000165151.b ENSGT00390000016807 ENSGT00390000000903.b.a ENSGT01050000244850.A.b.a.a Atlantic herring MODERN SPECIES 21 grm2b (ENSCHAG00000025014) TEX264 (ENSCHAG00000025008) ENSCHAG00000025002 bin2b (ENSCHAG00000024959) stk35l (ENSCHAG00000024947) ENSCHAG00000024935 ENSCHAG00000024931 HELZ2 (ENSCHAG00000024918) STMN3 (ENSCHAG00000024912) arfrp1 (ENSCHAG00000024895) CHRNA4 (ENSCHAG00000024836) KCNQ2 (ENSCHAG00000024632) RALGAPB (ENSCHAG00000024451) tox2 (ENSCHAG00000024410) SNTA1 (ENSCHAG00000024405) #21 cbfa2t2 (ENSCHAG00000024199) #22 NECAB3 (ENSCHAG00000024178) #23 itcha (ENSCHAG00000022207) #37 pxmp4 (ENSCHAG00000022119) #27 tgm5l (ENSCHAG00000022099) VSTM2L (ENSCHAG00000022093) ENSCHAG00000022089 quo (ENSCHAG00000022027) DLGAP4 (ENSCHAG00000022019) ENSCHAG00000022005 CHCHD6 (ENSCHAG00000021993) PLXNA1 (ENSCHAG00000021732) txnrd3 (ENSCHAG00000018885) CHST13 (ENSCHAG00000018788) SLC41A3 (ENSCHAG00000018620) aldh1l1 (ENSCHAG00000016696) Denticle herring MODERN SPECIES 3 ENSDCDG00000016719 ENSDCDG00000016717 ENSDCDG00000016714 tnni1b (ENSDCDG00000016712) csrp1b (ENSDCDG00000016707) ENSDCDG00000016704 HELZ2 (ENSDCDG00000016701) STMN3 (ENSDCDG00000016696) arfrp1 (ENSDCDG00000016693) ENSDCDG00000016691 KCNQ2 (ENSDCDG00000016550) RALGAPB (ENSDCDG00000016481) tox2 (ENSDCDG00000016457) tlr22 (ENSDCDG00000016451) SNTA1 (ENSDCDG00000016443) #21 cbfa2t2 (ENSDCDG00000015692) #22 NECAB3 (ENSDCDG00000015678) #23 itcha (ENSDCDG00000015061) #37 pxmp4 (ENSDCDG00000015025) #27 tgm5l (ENSDCDG00000015020) ENSDCDG00000035511 tgm2b (ENSDCDG00000035483) quo (ENSDCDG00000035467) DLGAP4 (ENSDCDG00000035463) ENSDCDG00000035462 myl9b (ENSDCDG00000035461) ENSDCDG00000035459 ENSDCDG00000035453 tpra1 (ENSDCDG00000035427) chchd6b (ENSDCDG00000035423) ENSDCDG00000035422 Otophysi ANCESTRAL SPECIES 15 ENSGT00390000006305 ENSGT00530000064137.a.a ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000160694.g.a ENSGT01030000234597.a.b.b.f ENSGT00940000156407 ENSGT00940000160093.a ENSGT00700000104550.a.j.b ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00940000163999.a.q.a ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000157014.f #37 ENSGT00940000155052 ENSGT00940000169138 ENSGT01070000254033 ENSGT00550000074997 ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00940000160402 ENSGT00390000010923.a ENSGT00950000182978.A.a.b.b ENSGT00950000182905.b ENSGT00940000160725 ENSGT00950000182932.C.a Characiphysae ANCESTRAL SPECIES 2 ENSGT00390000006305 ENSGT00530000064137.a.a ENSGT00390000003427 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000160694.g.a ENSGT01030000234597.a.b.b.f ENSGT00940000156407 ENSGT00940000160093.a ENSGT00700000104550.a.j.b ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00940000163999.a.q.a ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000157014.f #37 ENSGT00940000155052 ENSGT00940000169138 ENSGT01070000254033 ENSGT00550000074997 ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00940000160402 ENSGT00390000010923.a ENSGT00950000182978.A.a.b.b ENSGT00950000182905.b ENSGT00940000160725 ENSGT00950000182932.C.a Channel catfish MODERN SPECIES 2 mars1 (ENSIPUG00000024413) ddit3 (ENSIPUG00000024414) mbd6 (ENSIPUG00000024415) dctn2 (ENSIPUG00000024417) kif5a (ENSIPUG00000024421) ENSIPUG00000024422 soat2 (ENSIPUG00000024423) igsf8 (ENSIPUG00000024424) sp7 (ENSIPUG00000024425) STMN3 (ENSIPUG00000024484) arfrp1 (ENSIPUG00000024487) kcnq2 (ENSIPUG00000024496) ralgapb (ENSIPUG00000024505) tox2 (ENSIPUG00000024534) SNTA1 (ENSIPUG00000024538) #21 CBFA2T2 (ENSIPUG00000024542) #22 NECAB3 (ENSIPUG00000024550) #23 itcha (ENSIPUG00000024557) #37 SNRPB (ENSIPUG00000024569) ENSIPUG00000024573 ENSIPUG00000024575 ddx27 (ENSIPUG00000024627) ZNFX1 (ENSIPUG00000024633) Cdh22 (ENSIPUG00000024673) tfap2c (ENSIPUG00000024691) GCNT7 (ENSIPUG00000024693) rtfdc1 (ENSIPUG00000024705) GCNT7 (ENSIPUG00000024707) eya2 (ENSIPUG00000024710) cyp24a1 (ENSIPUG00000024718) ENSIPUG00000024725 Characiphysae_b ANCESTRAL SPECIES ENSGT00390000003427 ENSGT00940000154801.n.a ENSGT01080000258228 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000160694.g.a.a ENSGT01030000234597.a.b.b.f ENSGT00940000156407 ENSGT00940000160093.a ENSGT00700000104550.a.j.b ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00940000163999.a.q.a ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000157014.f #37 ENSGT00940000155052 ENSGT01070000254033 ENSGT00550000074997 ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00940000160402 ENSGT00390000010923.a ENSGT00950000182978.A.a.b.b ENSGT00950000182905.b ENSGT00940000160725 ENSGT00950000182932.C.a ENSGT00940000165387.b Characoidei ANCESTRAL SPECIES ENSGT00390000003427 ENSGT01030000234812.b ENSGT01080000258228 ENSGT00940000159439.b ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293 ENSGT00940000160694.g.a.a ENSGT01030000234597.a.b.b.f ENSGT00940000156407 ENSGT00940000160093.a ENSGT00700000104550.a.j.b ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00940000163999.a.q.a ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000157014.f #37 ENSGT00940000155052 ENSGT01070000254033 ENSGT00550000074997 ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923.a ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT00950000182905.b ENSGT00940000160725 ENSGT00950000182932.C.a ENSGT00940000165387.b Mexicana tetra MODERN SPECIES 4 ENSAMXG00000017377 dctn2 (ENSAMXG00000017402) ENSAMXG00000041097 ENSAMXG00000034826 KIF5A (ENSAMXG00000017425) soat2 (ENSAMXG00000042964) igsf8 (ENSAMXG00000033883) sp7 (ENSAMXG00000029881) HELZ2 (ENSAMXG00000017465) STMN3 (ENSAMXG00000017478) arfrp1 (ENSAMXG00000042798) KCNQ2 (ENSAMXG00000034237) RALGAPB (ENSAMXG00000000938) tox2 (ENSAMXG00000041393) SNTA1 (ENSAMXG00000000933) #21 cbfa2t2 (ENSAMXG00000000928) #22 ENSAMXG00000043347 #23 ENSAMXG00000034759 #23 itcha (ENSAMXG00000000916) #37 snrpb (ENSAMXG00000029434) ddx27 (ENSAMXG00000000911) ZNFX1 (ENSAMXG00000000907) ENSAMXG00000033717 CDH22 (ENSAMXG00000000906) tfap2c (ENSAMXG00000037066) GCNT7 (ENSAMXG00000043986) rtf2 (ENSAMXG00000000890) eya2 (ENSAMXG00000041270) cyp24a1 (ENSAMXG00000000873) ENSAMXG00000039646 ENSAMXG00000000869 Red-bellied piranha MODERN SPECIES 108 ENSPNAG00000016990 KIF5A (ENSPNAG00000016976) ENSPNAG00000016933 ENSPNAG00000016915 soat2 (ENSPNAG00000016902) igsf8 (ENSPNAG00000016880) sp7 (ENSPNAG00000016870) ENSPNAG00000016859 STMN3 (ENSPNAG00000016784) arfrp1 (ENSPNAG00000003438) KCNQ2 (ENSPNAG00000016721) RALGAPB (ENSPNAG00000016572) tox2 (ENSPNAG00000016289) SNTA1 (ENSPNAG00000016280) #21 ENSPNAG00000016266 cbfa2t2 (ENSPNAG00000016228) #22 NECAB3 (ENSPNAG00000016177) #23 itcha (ENSPNAG00000016159) #37 snrpb (ENSPNAG00000016126) ENSPNAG00000016072 ddx27 (ENSPNAG00000016043) ZNFX1 (ENSPNAG00000015929) CDH22 (ENSPNAG00000015917) tfap2c (ENSPNAG00000015865) rtf2 (ENSPNAG00000015828) GCNT7 (ENSPNAG00000015771) eya2 (ENSPNAG00000015768) cyp24a1 (ENSPNAG00000015742) ENSPNAG00000015682 ENSPNAG00000015660 Electric eel MODERN SPECIES 44 dctn2 (ENSEEEG00000008944) ENSEEEG00000008943 ENSEEEG00000008833 soat2 (ENSEEEG00000008825) igsf8 (ENSEEEG00000008823) sp7 (ENSEEEG00000008822) ENSEEEG00000008819 ENSEEEG00000008821 ENSEEEG00000008818 STMN3 (ENSEEEG00000008795) arfrp1 (ENSEEEG00000008789) KCNQ2 (ENSEEEG00000008785) RALGAPB (ENSEEEG00000008773) tox2 (ENSEEEG00000008762) SNTA1 (ENSEEEG00000008756) #21 cbfa2t2 (ENSEEEG00000008752) #22 ENSEEEG00000008749 #23 ENSEEEG00000008745 #23 itcha (ENSEEEG00000007878) #37 ENSEEEG00000007834 snrpb (ENSEEEG00000007833) ddx27 (ENSEEEG00000007816) ZNFX1 (ENSEEEG00000007788) ENSEEEG00000007786 CDH22 (ENSEEEG00000007783) tfap2c (ENSEEEG00000007781) GCNT7 (ENSEEEG00000007766) rtf2 (ENSEEEG00000007762) eya2 (ENSEEEG00000007761) cyp24a1 (ENSEEEG00000007760) ENSEEEG00000007759 Cyprinoidei ANCESTRAL SPECIES 2 ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00940000163999.a.q.a ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000157014.f.e #37 ENSGT00940000155052 ENSGT00550000074997 ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00940000160402 ENSGT00390000010923.a ENSGT00950000182978.A.a.b.b ENSGT00950000182905.b ENSGT00950000182932.C.a ENSGT00940000165387.b ENSGT00530000064134.a.b ENSGT00880000138014.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 9 ENSGT00550000075017.c ENSGT00390000006305.k ENSGT00530000064137.a.a.d ENSGT00390000003427.c ENSGT00940000154801.n.a ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293.b ENSGT00940000160694.g.a.c.a ENSGT01030000234597.a.b.b.f ENSGT00940000156407.h ENSGT00940000160093.a.c.a ENSGT00940000158764.g.e.b ENSGT00950000182863.A.a.b.e #21 ENSGT00940000163999.a.q.a.a.b ENSGT00950000183176.a.c #22 ENSGT00950000183131.a.f #23 ENSGT00940000157014.f.e.b #37 ENSGT00940000157014.f.e.a #37 ENSGT00940000155052.i ENSGT01100000264229 ENSGT00940000155052.j ENSGT00550000074997 ENSGT00940000155154.b.r ENSGT00940000159376.b ENSGT00950000182848.c.b.a.b.b ENSGT00940000155154.b.q ENSGT00940000159376.a ENSGT00950000182848.c.b.a.b.a ENSGT00940000160402.h ENSGT00390000010923.a.b Goldfish MODERN SPECIES 24 ENSCARG00000018906 dctn2 (ENSCARG00000018917) soat2 (ENSCARG00000019007) igsf8 (ENSCARG00000019035) sp7 (ENSCARG00000019038) ENSCARG00000019046 ENSCARG00000019063 ENSCARG00000019070 STMN3 (ENSCARG00000019075) arfrp1 (ENSCARG00000019082) KCNQ2 (ENSCARG00000019147) RALGAPB (ENSCARG00000020509) tox2 (ENSCARG00000020808) SNTA1 (ENSCARG00000020840) #21 ENSCARG00000020928 cbfa2t2 (ENSCARG00000020957) #22 NECAB3 (ENSCARG00000021597) #23 itcha (ENSCARG00000021657) #37 snrpb (ENSCARG00000022573) ENSCARG00000022585 ZNFX1 (ENSCARG00000022603) CDH22 (ENSCARG00000022673) GCNT7 (ENSCARG00000022690) cacna2d2a (ENSCARG00000022711) abhd14b (ENSCARG00000022781) mst1 (ENSCARG00000022805) ENSCARG00000022923 C3orf18 (ENSCARG00000022926) gnb1b (ENSCARG00000022932) ENSCARG00000022948 rbm5 (ENSCARG00000022958) Cyprininae_a ANCESTRAL SPECIES 135 ENSGT00530000064137.a.a.c ENSGT00390000003427.d ENSGT00940000154801.n.a ENSGT00950000183081.a.a.b ENSGT00940000161314 ENSGT00940000161293.b ENSGT00940000160694.g.a.c.a ENSGT01030000234597.a.b.b.f ENSGT00940000156407.h ENSGT00940000160093.a.c.a ENSGT00700000104550.a.j.b.f ENSGT00940000158764.g.e.a.b ENSGT00940000163999.a.q.a.a.b ENSGT00940000158764.g.e.b ENSGT00950000182863.A.a.b.e #21 ENSGT00950000183176.a.c #22 ENSGT00940000157014.f.e.a #37 ENSGT00940000155052.i ENSGT00940000155052.j ENSGT00550000074997 ENSGT00940000155154.b.q ENSGT00940000159376.a ENSGT00950000182848.c.b.a.b.a ENSGT00940000160402.h ENSGT00390000010923.a.b ENSGT00950000182978.A.a.b.b.a ENSGT00950000182905.b.c ENSGT00940000165387.b.a ENSGT00530000064134.a.b.a ENSGT00880000138014.b.g.a ENSGT01100000263545.a.b.d.b.g Common carp reference MODERN SPECIES 16 ARHGAP9 (ENSCCRG00000001377) mars1 (ENSCCRG00000041762) ddit3 (ENSCCRG00000056475) dctn2 (ENSCCRG00000041698) ENSCCRG00000041739 soat2 (ENSCCRG00000041670) igsf8 (ENSCCRG00000009398) sp7 (ENSCCRG00000000263) ENSCCRG00000075715 arfrp1 (ENSCCRG00000081525) ENSCCRG00000075587 ENSCCRG00000015212 tox2 (ENSCCRG00000018061) ENSCCRG00000054132 SNTA1 (ENSCCRG00000076916) #21 cbfa2t2 (ENSCCRG00000012347) #22 NECAB3 (ENSCCRG00000054016) #23 itcha (ENSCCRG00000014923) #37 snrpb (ENSCCRG00000051019) ENSCCRG00000067854 ENSCCRG00000001233 tfap2c (ENSCCRG00000041114) ENSCCRG00000077215 RTF2 (ENSCCRG00000068196) eya2 (ENSCCRG00000024424) cyp24a1 (ENSCCRG00000023843) ENSCCRG00000023822 ENSCCRG00000017237 ENSCCRG00000065108 ENSCCRG00000074266 ENSCCRG00000056037 Golden-line barbel MODERN SPECIES 484 RALGAPB (ENSSGRG00000026621) tox2 (ENSSGRG00000026999) ENSSGRG00000027001 #21 ENSSGRG00000027002 cbfa2t2 (ENSSGRG00000027003) #22 itcha (ENSSGRG00000027009) #37 snrpb (ENSSGRG00000027019) ddx27 (ENSSGRG00000027040) ZNFX1 (ENSSGRG00000027634) CDH22 (ENSSGRG00000027703) Cyprininae ANCESTRAL SPECIES 1018 ENSGT00940000158764.g.e.a.a ENSGT00950000182863.A.a.b.f #21 ENSGT00940000163999.a.q.a.a.a ENSGT00950000183176.a.d #22 Goldfish MODERN SPECIES 46 dctn2 (ENSCARG00000004281) ENSCARG00000004168 igsf8 (ENSCARG00000004141) sp7 (ENSCARG00000004131) ENSCARG00000004113 ENSCARG00000003906 ENSCARG00000003832 STMN3 (ENSCARG00000003822) arfrp1 (ENSCARG00000003800) KCNQ2 (ENSCARG00000003265) RALGAPB (ENSCARG00000003202) ENSCARG00000003176 tox2 (ENSCARG00000003149) ENSCARG00000003132 SNTA1 (ENSCARG00000003112) #21 cbfa2t2 (ENSCARG00000002995) #22 NECAB3 (ENSCARG00000002973) #23 itcha (ENSCARG00000002538) #37 ENSCARG00000002479 snrpb (ENSCARG00000002471) ddx27 (ENSCARG00000002449) ZNFX1 (ENSCARG00000002236) CDH22 (ENSCARG00000002090) ENSCARG00000002039 OCA2 (ENSCARG00000001801) HERC2 (ENSCARG00000001529) nipa2 (ENSCARG00000001511) ENSCARG00000001508 cyfip1 (ENSCARG00000001456) tubgcp5 (ENSCARG00000001370) CHST7 (ENSCARG00000001344) Cyprininae_a ANCESTRAL SPECIES 20 ENSGT00940000158764.g.e.a.a ENSGT00950000182863.A.a.b.f #21 ENSGT00940000163999.a.q.a.a.a ENSGT00950000183176.a.d #22 ENSGT00950000183131.a.f #23 ENSGT00940000157014.f.e.b #37 ENSGT00940000155154.b.r ENSGT00940000159376.b ENSGT00950000182848.c.b.a.b.b ENSGT00940000160402.g ENSGT00390000010923.a.a ENSGT00950000182978.A.a.b.b.b ENSGT00950000182905.b.d ENSGT00950000182932.C.a ENSGT00940000165387.b.b ENSGT00530000064134.a.b.b ENSGT00880000138014.b.g.b ENSGT00880000138014.b.h ENSGT01100000263545.a.b.d.b.h Common carp reference MODERN SPECIES 10 mars1 (ENSCCRG00000057358) ENSCCRG00000016542 ddit3 (ENSCCRG00000041750) ENSCCRG00000041216 dctn2 (ENSCCRG00000075980) ENSCCRG00000068201 sp7 (ENSCCRG00000009400) ENSCCRG00000068371 ENSCCRG00000081112 ENSCCRG00000000298 ENSCCRG00000054670 ENSCCRG00000065476 tox2 (ENSCCRG00000068710) SNTA1 (ENSCCRG00000080321) #21 ENSCCRG00000075134 cbfa2t2 (ENSCCRG00000013531) #22 NECAB3 (ENSCCRG00000013575) #23 itcha (ENSCCRG00000053905) #37 ddx27 (ENSCCRG00000064501) ENSCCRG00000067473 ENSCCRG00000036157 tfap2c (ENSCCRG00000058789) rtf2 (ENSCCRG00000035552) GCNT7 (ENSCCRG00000041154) eya2 (ENSCCRG00000027542) cyp24a1 (ENSCCRG00000027418) ENSCCRG00000065969 ncoa5 (ENSCCRG00000024756) ctsa (ENSCCRG00000026540) pltp (ENSCCRG00000076975) PCIF1 (ENSCCRG00000065285) Golden-line barbel MODERN SPECIES 93 tox2 (ENSSGRG00000026111) SNTA1 (ENSSGRG00000026107) #21 cbfa2t2 (ENSSGRG00000026102) #22 NECAB3 (ENSSGRG00000026092) #23 itcha (ENSSGRG00000026091) #37 ENSSGRG00000026090 #37 snrpb (ENSSGRG00000026026) ddx27 (ENSSGRG00000025946) ZNFX1 (ENSSGRG00000025916) CDH22 (ENSSGRG00000025909) tfap2c (ENSSGRG00000025906) GCNT7 (ENSSGRG00000025902) rtf2 (ENSSGRG00000025870) eya2 (ENSSGRG00000025868) cyp24a1 (ENSSGRG00000025569) ENSSGRG00000025556 ENSSGRG00000025020 ncoa5 (ENSSGRG00000024998) Zebrafish MODERN SPECIES 21 ddit3 (ENSDARG00000059836) ENSDARG00000086980 dctn2 (ENSDARG00000031388) ENSDARG00000059818 soat2 (ENSDARG00000059824) igsf8 (ENSDARG00000038467) sp7 (ENSDARG00000019516) ENSDARG00000016527 STMN3 (ENSDARG00000038465) arfrp1 (ENSDARG00000057857) ENSDARG00000087071 KCNQ2 (ENSDARG00000091130) RALGAPB (ENSDARG00000088899) tox2 (ENSDARG00000100055) SNTA1 (ENSDARG00000098420) #21 cbfa2t2 (ENSDARG00000074337) #22 NECAB3 (ENSDARG00000074794) #23 itcha (ENSDARG00000074903) #37 snrpb (ENSDARG00000011125) ddx27 (ENSDARG00000091831) ZNFX1 (ENSDARG00000100280) CDH22 (ENSDARG00000098824) tfap2c (ENSDARG00000040606) GCNT7 (ENSDARG00000040608) rtf2 (ENSDARG00000040607) eya2 (ENSDARG00000018984) cyp24a1 (ENSDARG00000103277) ENSDARG00000077028 ENSDARG00000075815 ncoa5 (ENSDARG00000016345) ctsa (ENSDARG00000098114) Euteleosteomorpha ANCESTRAL SPECIES 16 ENSGT00940000159430 ENSGT00390000012914 ENSGT00940000163348 ENSGT00940000178369 ENSGT01030000234623.a.a.a.a.a ENSGT00940000160207.a ENSGT00940000155094.a ENSGT00390000006008 ENSGT00940000158197.c ENSGT00940000166655 ENSGT00940000156407 ENSGT00940000160093.a ENSGT00700000104550.a.j.b ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000157014.f #37 ENSGT00390000001562 #27 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00550000074997 ENSGT01070000254033 ENSGT00940000169138 ENSGT00940000155052 ENSGT00730000111020.b.b Acanthomorphata ANCESTRAL SPECIES 26 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Euacanthomorphacea ANCESTRAL SPECIES 1 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Percomorphaceae ANCESTRAL SPECIES 1 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Percomorphaceae_C ANCESTRAL SPECIES 1 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT01060000248530.C.d ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 Percomorphaceae_D ANCESTRAL SPECIES 3 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Anabantaria ANCESTRAL SPECIES ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Zig-zag eel MODERN SPECIES 19 ENSMAMG00000009517 prelid3b (ENSMAMG00000009500) ENSMAMG00000009479 ipo9 (ENSMAMG00000008798) shisa4 (ENSMAMG00000008778) ENSMAMG00000008764 timm17a (ENSMAMG00000024741) ENSMAMG00000026108 INKA2 (ENSMAMG00000026222) KCND3 (ENSMAMG00000008691) CTTNBP2NL (ENSMAMG00000008683) ENSMAMG00000008666 st7l (ENSMAMG00000008630) tox2 (ENSMAMG00000008566) SNTA1 (ENSMAMG00000008517) #21 cbfa2t2 (ENSMAMG00000008483) #22 NECAB3 (ENSMAMG00000008467) #23 ENSMAMG00000008450 ENSMAMG00000008435 ENSMAMG00000008423 ENSMAMG00000008384 tfap2c (ENSMAMG00000008361) ENSMAMG00000024278 rtf2 (ENSMAMG00000008340) eya2 (ENSMAMG00000008321) ENSMAMG00000008301 ENSMAMG00000025163 #27 ENSMAMG00000008269 #37 ENSMAMG00000008254 ENSMAMG00000027940 ENSMAMG00000008170 Anabantoidei ANCESTRAL SPECIES 1 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Siamese fighting fish MODERN SPECIES 16 ENSBSLG00000025735 GNAS (ENSBSLG00000025750) ipo9 (ENSBSLG00000025814) shisa4 (ENSBSLG00000025850) LMOD1 (ENSBSLG00000025851) timm17a (ENSBSLG00000025853) ENSBSLG00000025855 INKA2 (ENSBSLG00000025856) KCND3 (ENSBSLG00000025857) CTTNBP2NL (ENSBSLG00000025860) wnt2ba (ENSBSLG00000025863) st7l (ENSBSLG00000025865) tox2 (ENSBSLG00000025874) ENSBSLG00000025875 SNTA1 (ENSBSLG00000025876) #21 cbfa2t2 (ENSBSLG00000025884) #22 NECAB3 (ENSBSLG00000025892) #23 rbck1 (ENSBSLG00000025893) tbc1d20 (ENSBSLG00000025895) ZNFX1 (ENSBSLG00000025896) CDH22 (ENSBSLG00000025897) ENSBSLG00000025899 tfap2c (ENSBSLG00000025900) rtf2 (ENSBSLG00000025901) GCNT7 (ENSBSLG00000025902) eya2 (ENSBSLG00000025903) tgm5l (ENSBSLG00000025906) pxmp4 (ENSBSLG00000025907) #27 itcha (ENSBSLG00000025915) #37 bloc1s1 (ENSBSLG00000025917) rdh5 (ENSBSLG00000025918) Climbing perch MODERN SPECIES 18 prelid3b (ENSATEG00000025035) ENSATEG00000025036 ENSATEG00000026000 ipo9 (ENSATEG00000025038) shisa4 (ENSATEG00000025039) ENSATEG00000025040 timm17a (ENSATEG00000025041) ENSATEG00000025043 INKA2 (ENSATEG00000025044) KCND3 (ENSATEG00000025045) CTTNBP2NL (ENSATEG00000025046) ENSATEG00000025047 st7l (ENSATEG00000025048) tox2 (ENSATEG00000025049) SNTA1 (ENSATEG00000025050) #21 cbfa2t2 (ENSATEG00000025051) #22 NECAB3 (ENSATEG00000030193) #23 ENSATEG00000026465 ENSATEG00000025054 ENSATEG00000025055 ENSATEG00000025056 tfap2c (ENSATEG00000025057) rtf2 (ENSATEG00000025058) GCNT7 (ENSATEG00000025059) ENSATEG00000025060 ENSATEG00000025061 ENSATEG00000025062 #27 ENSATEG00000025063 #37 bloc1s1 (ENSATEG00000029358) ENSATEG00000025065 gls2b (ENSATEG00000025066) Carangaria ANCESTRAL SPECIES 3 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Carangaria_A ANCESTRAL SPECIES 92 ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Seriola ANCESTRAL SPECIES 166 ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 Greater amberjack MODERN SPECIES 311 KCND3 (ENSSDUG00000023622) CTTNBP2NL (ENSSDUG00000023623) wnt2ba (ENSSDUG00000023624) st7l (ENSSDUG00000023625) tox2 (ENSSDUG00000023626) SNTA1 (ENSSDUG00000023627) #21 cbfa2t2 (ENSSDUG00000023628) #22 ENSSDUG00000023629 #23 ENSSDUG00000023630 #23 rbck1 (ENSSDUG00000023631) tbc1d20 (ENSSDUG00000023632) ZNFX1 (ENSSDUG00000023633) CDH22 (ENSSDUG00000023634) Yellowtail amberjack MODERN SPECIES 3114 KCND3 (ENSSLDG00000008587) CTTNBP2NL (ENSSLDG00000008571) wnt2ba (ENSSLDG00000008539) st7l (ENSSLDG00000008479) tox2 (ENSSLDG00000008454) SNTA1 (ENSSLDG00000008414) #21 cbfa2t2 (ENSSLDG00000008367) #22 NECAB3 (ENSSLDG00000008330) #23 rbck1 (ENSSLDG00000008305) tbc1d20 (ENSSLDG00000008277) ZNFX1 (ENSSLDG00000008179) CDH22 (ENSSLDG00000008082) Barramundi perch MODERN SPECIES 224 KCND3 (ENSLCAG00010016581) CTTNBP2NL (ENSLCAG00010016560) wnt2ba (ENSLCAG00010016554) st7l (ENSLCAG00010016451) tox2 (ENSLCAG00010016414) SNTA1 (ENSLCAG00010016408) #21 cbfa2t2 (ENSLCAG00010016403) #22 NECAB3 (ENSLCAG00010016394) #23 rbck1 (ENSLCAG00010016385) tbc1d20 (ENSLCAG00010016380) ZNFX1 (ENSLCAG00010016335) CDH22 (ENSLCAG00010016315) tfap2c (ENSLCAG00010016301) GCNT7 (ENSLCAG00010016296) rtf2 (ENSLCAG00010016293) eya2 (ENSLCAG00010016289) tgm5l (ENSLCAG00010016287) pxmp4 (ENSLCAG00010016286) #27 itcha (ENSLCAG00010014766) #37 bloc1s1 (ENSLCAG00010014454) rdh5 (ENSLCAG00010014450) gls2b (ENSLCAG00010014429) Pleuronectoidei ANCESTRAL SPECIES 4 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Turbot MODERN SPECIES 18 prelid3b (ENSSMAG00000011815) ENSSMAG00000011813 ENSSMAG00000011773 ipo9 (ENSSMAG00000011675) shisa4 (ENSSMAG00000011653) ENSSMAG00000011649 timm17a (ENSSMAG00000011624) ENSSMAG00000011602 INKA2 (ENSSMAG00000011594) KCND3 (ENSSMAG00000011563) CTTNBP2NL (ENSSMAG00000011554) ENSSMAG00000011544 st7l (ENSSMAG00000011496) tox2 (ENSSMAG00000011352) SNTA1 (ENSSMAG00000011339) #21 cbfa2t2 (ENSSMAG00000011275) #22 NECAB3 (ENSSMAG00000011230) #23 ENSSMAG00000011217 ENSSMAG00000011173 ENSSMAG00000011154 ENSSMAG00000011085 tfap2c (ENSSMAG00000009883) ENSSMAG00000009924 rtf2 (ENSSMAG00000009907) eya2 (ENSSMAG00000011039) ENSSMAG00000011029 ENSSMAG00000011024 #27 ENSSMAG00000010958 #37 bloc1s1 (ENSSMAG00000030060) ENSSMAG00000010928 gls2b (ENSSMAG00000010898) Tongue sole MODERN SPECIES 2 cyp24a1 (ENSCSEG00000019846) ENSCSEG00000019842 manbal (ENSCSEG00000019841) SRC (ENSCSEG00000019825) APCDD1L (ENSCSEG00000019818) vapb (ENSCSEG00000019802) rab22a (ENSCSEG00000019797) ENSCSEG00000019763 BCDIN3D (ENSCSEG00000019757) COX14 (ENSCSEG00000019754) cers5 (ENSCSEG00000019746) gpd1b (ENSCSEG00000019739) st7l (ENSCSEG00000019212) tox2 (ENSCSEG00000019198) SNTA1 (ENSCSEG00000019187) #21 cbfa2t2 (ENSCSEG00000019176) #22 NECAB3 (ENSCSEG00000019158) #23 rbck1 (ENSCSEG00000019145) tbc1d20 (ENSCSEG00000019138) ZNFX1 (ENSCSEG00000019131) CDH22 (ENSCSEG00000019123) tfap2c (ENSCSEG00000019107) ENSCSEG00000019102 GCNT7 (ENSCSEG00000019096) rtf2 (ENSCSEG00000019087) eya2 (ENSCSEG00000019079) tgm5l (ENSCSEG00000019053) pxmp4 (ENSCSEG00000019042) #27 itcha (ENSCSEG00000019027) #37 bloc1s1 (ENSCSEG00000019018) rdh5 (ENSCSEG00000019014) Eupercaria ANCESTRAL SPECIES ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT01060000248530.C.d ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 Tetraodontidae ANCESTRAL SPECIES 1 ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00390000011581.d ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000154129.gd ENSGT00940000159006.c.a ENSGT00390000010265 ENSGT00940000154360.A.a ENSGT00940000155224.c.a ENSGT00390000016619.b ENSGT00940000155331.B ENSGT00940000161232 ENSGT00390000015021 ENSGT00940000159891 ENSGT00940000174536 ENSGT00940000166256 Fugu MODERN SPECIES 10 GNAS (ENSTRUG00000013102) ipo9 (ENSTRUG00000012941) shisa4 (ENSTRUG00000022506) LMOD1 (ENSTRUG00000012878) ENSTRUG00000012733 timm17a (ENSTRUG00000012814) ENSTRUG00000029605 ift52 (ENSTRUG00000012705) INKA2 (ENSTRUG00000030122) KCND3 (ENSTRUG00000012622) CTTNBP2NL (ENSTRUG00000021985) wnt2ba (ENSTRUG00000012568) st7l (ENSTRUG00000012482) tox2 (ENSTRUG00000012424) SNTA1 (ENSTRUG00000012314) #21 cbfa2t2 (ENSTRUG00000012051) #22 NECAB3 (ENSTRUG00000026760) #23 rbck1 (ENSTRUG00000011750) ENSTRUG00000032854 tbc1d20 (ENSTRUG00000011618) PCBP2 (ENSTRUG00000011419) MAP3K12 (ENSTRUG00000011230) myg1 (ENSTRUG00000011121) ENSTRUG00000011099 ENSTRUG00000010345 nckap1l (ENSTRUG00000009633) ENSTRUG00000009342 ENSTRUG00000009292 ENSTRUG00000028742 ENSTRUG00000032881 npff (ENSTRUG00000009275) Tetraodon MODERN SPECIES 2 ENSTNIG00000000002 ipo9 (ENSTNIG00000007044) shisa4 (ENSTNIG00000007043) LMOD1 (ENSTNIG00000007042) timm17a (ENSTNIG00000007041) ENSTNIG00000007040 ift52 (ENSTNIG00000007039) INKA2 (ENSTNIG00000007038) KCND3 (ENSTNIG00000007037) ENSTNIG00000000525 CTTNBP2NL (ENSTNIG00000007036) wnt2ba (ENSTNIG00000007035) st7l (ENSTNIG00000007034) tox2 (ENSTNIG00000007033) SNTA1 (ENSTNIG00000007032) #21 cbfa2t2 (ENSTNIG00000014834) #22 NECAB3 (ENSTNIG00000014833) #23 ENSTNIG00000014832 rbck1 (ENSTNIG00000014831) ENSTNIG00000014830 tbc1d20 (ENSTNIG00000014829) MAP3K12 (ENSTNIG00000014828) myg1 (ENSTNIG00000014827) ENSTNIG00000014826 COL2A1 (ENSTNIG00000014825) nckap1l (ENSTNIG00000014824) ENSTNIG00000014823 PPP1R1A (ENSTNIG00000014822) ITGA7 (ENSTNIG00000014821) alas1 (ENSTNIG00000014820) b9d2 (ENSTNIG00000014819) Eupecaria_A ANCESTRAL SPECIES ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT01060000248530.C.d ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 Ballan wrasse MODERN SPECIES 407 ENSLBEG00000023666 CTTNBP2NL (ENSLBEG00000023653) wnt2ba (ENSLBEG00000023633) st7l (ENSLBEG00000023598) tox2 (ENSLBEG00000023573) SNTA1 (ENSLBEG00000023541) #21 cbfa2t2 (ENSLBEG00000023516) #22 NECAB3 (ENSLBEG00000023491) #23 rbck1 (ENSLBEG00000023414) tbc1d20 (ENSLBEG00000023379) ZNFX1 (ENSLBEG00000023342) Eupecaria_B ANCESTRAL SPECIES 2 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT01060000248530.C.d ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 Perciformes ANCESTRAL SPECIES ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00940000163895 ENSGT01060000248530.C.d ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 Cottioidei ANCESTRAL SPECIES ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Lumpfish MODERN SPECIES 20 prelid3b (ENSCLMG00005013194) ENSCLMG00005013212 GNAS (ENSCLMG00005013240) ipo9 (ENSCLMG00005013404) shisa4 (ENSCLMG00005000080) LMOD1 (ENSCLMG00005000108) timm17a (ENSCLMG00005000122) ENSCLMG00005000141 INKA2 (ENSCLMG00005000157) KCND3 (ENSCLMG00005000170) CTTNBP2NL (ENSCLMG00005000191) wnt2ba (ENSCLMG00005000250) st7l (ENSCLMG00005000309) tox2 (ENSCLMG00005000794) SNTA1 (ENSCLMG00005000798) #21 cbfa2t2 (ENSCLMG00005000800) #22 ENSCLMG00005000802 #23 rbck1 (ENSCLMG00005000804) tbc1d20 (ENSCLMG00005000854) ZNFX1 (ENSCLMG00005000864) CDH22 (ENSCLMG00005001010) tfap2c (ENSCLMG00005001012) rtf2 (ENSCLMG00005001013) GCNT7 (ENSCLMG00005001014) eya2 (ENSCLMG00005001015) tgm5l (ENSCLMG00005001046) pxmp4 (ENSCLMG00005001050) #27 itcha (ENSCLMG00005001098) #37 bloc1s1 (ENSCLMG00005008973) rdh5 (ENSCLMG00005008974) gls2b (ENSCLMG00005009007) Stickleback MODERN SPECIES 17 prelid3b (ENSGACG00000006335) tubb1 (ENSGACG00000006306) GNAS (ENSGACG00000006249) ipo9 (ENSGACG00000006233) shisa4 (ENSGACG00000006225) LMOD1 (ENSGACG00000006223) timm17a (ENSGACG00000006187) rap1ab (ENSGACG00000006153) INKA2 (ENSGACG00000006147) KCND3 (ENSGACG00000006124) CTTNBP2NL (ENSGACG00000006115) wnt2ba (ENSGACG00000006111) st7l (ENSGACG00000006093) tox2 (ENSGACG00000006088) SNTA1 (ENSGACG00000006083) #21 cbfa2t2 (ENSGACG00000006075) #22 NECAB3 (ENSGACG00000006069) #23 rbck1 (ENSGACG00000006056) tbc1d20 (ENSGACG00000006050) ZNFX1 (ENSGACG00000006038) CDH22 (ENSGACG00000005966) tfap2c (ENSGACG00000005944) GCNT7 (ENSGACG00000005941) rtf2 (ENSGACG00000005926) eya2 (ENSGACG00000005912) tgm5l (ENSGACG00000005904) pxmp4 (ENSGACG00000005891) #27 itcha (ENSGACG00000005875) #37 bloc1s1 (ENSGACG00000005870) rdh5 (ENSGACG00000005847) gls2b (ENSGACG00000005817) Perciformes_a ANCESTRAL SPECIES 5 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00940000163895 ENSGT01060000248530.C.d ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 Channel bull blenny MODERN SPECIES 19 prelid3b (ENSCGOG00000013223) ENSCGOG00000013226 ENSCGOG00000013273 ipo9 (ENSCGOG00000014708) shisa4 (ENSCGOG00000015365) LMOD1 (ENSCGOG00000015366) timm17a (ENSCGOG00000015367) rap1ab (ENSCGOG00000015372) INKA2 (ENSCGOG00000015546) KCND3 (ENSCGOG00000015548) CTTNBP2NL (ENSCGOG00000015562) wnt2ba (ENSCGOG00000015569) st7l (ENSCGOG00000015612) tox2 (ENSCGOG00000016757) SNTA1 (ENSCGOG00000016765) #21 cbfa2t2 (ENSCGOG00000016835) #22 NECAB3 (ENSCGOG00000017215) #23 rbck1 (ENSCGOG00000017217) tbc1d20 (ENSCGOG00000017221) ZNFX1 (ENSCGOG00000017228) CDH22 (ENSCGOG00000017329) ENSCGOG00000018091 tfap2c (ENSCGOG00000018093) rtf2 (ENSCGOG00000018096) GCNT7 (ENSCGOG00000018098) eya2 (ENSCGOG00000018103) tgm5l (ENSCGOG00000018128) pxmp4 (ENSCGOG00000018129) #27 itcha (ENSCGOG00000018197) #37 bloc1s1 (ENSCGOG00000020690) rdh5 (ENSCGOG00000020700) Pike perch MODERN SPECIES 17 GNAS (ENSSLUG00000022470) ENSSLUG00000022844 ENSSLUG00000022856 ipo9 (ENSSLUG00000022874) shisa4 (ENSSLUG00000022888) LMOD1 (ENSSLUG00000022891) timm17a (ENSSLUG00000022894) ENSSLUG00000022900 ENSSLUG00000000262 KCND3 (ENSSLUG00000000267) CTTNBP2NL (ENSSLUG00000000276) wnt2ba (ENSSLUG00000000283) st7l (ENSSLUG00000000356) tox2 (ENSSLUG00000000459) SNTA1 (ENSSLUG00000000472) #21 cbfa2t2 (ENSSLUG00000000510) #22 NECAB3 (ENSSLUG00000000542) #23 rbck1 (ENSSLUG00000000548) tbc1d20 (ENSSLUG00000000553) ZNFX1 (ENSSLUG00000000580) CDH22 (ENSSLUG00000000666) tfap2c (ENSSLUG00000000674) rtf2 (ENSSLUG00000000679) GCNT7 (ENSSLUG00000000686) ENSSLUG00000000690 eya2 (ENSSLUG00000000699) tgm5l (ENSSLUG00000000711) pxmp4 (ENSSLUG00000000717) #27 itcha (ENSSLUG00000001012) #37 bloc1s1 (ENSSLUG00000004132) rdh5 (ENSSLUG00000004157) Eupecaria_C ANCESTRAL SPECIES ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Gilthead seabream MODERN SPECIES 20 prelid3b (ENSSAUG00010021278) ENSSAUG00010021276 GNAS (ENSSAUG00010020708) ipo9 (ENSSAUG00010019778) shisa4 (ENSSAUG00010019759) LMOD1 (ENSSAUG00010019757) Tim17A (ENSSAUG00010019755) ENSSAUG00010019728 INKA2 (ENSSAUG00010019724) KCND3 (ENSSAUG00010019718) CTTNBP2NL (ENSSAUG00010019714) wnt2ba (ENSSAUG00010019711) st7l (ENSSAUG00010017894) tox2 (ENSSAUG00010017887) SNTA1 (ENSSAUG00010017758) #21 cbfa2t2 (ENSSAUG00010017211) #22 NECAB3 (ENSSAUG00010017198) #23 rbck1 (ENSSAUG00010017194) tbc1d20 (ENSSAUG00010017190) ZNFX1 (ENSSAUG00010017184) CDH22 (ENSSAUG00010017167) ENSSAUG00010017160 ENSSAUG00010017156 tfap2c (ENSSAUG00010017146) GCNT7 (ENSSAUG00010017140) rtf2 (ENSSAUG00010017138) eya2 (ENSSAUG00010017131) tgm5l (ENSSAUG00010017129) pxmp4 (ENSSAUG00010017128) #27 itcha (ENSSAUG00010008871) #37 bloc1s1 (ENSSAUG00010008776) Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a European seabass MODERN SPECIES 10 STK6 (ENSDLAG00005009640) prelid3b (ENSDLAG00005009646) TUB (ENSDLAG00005009663) ENSDLAG00005031086 ipo9 (ENSDLAG00005010259) ENSDLAG00005030490 ENSDLAG00005010947 ENSDLAG00005010956 INKA2 (ENSDLAG00005010963) KCND3 (ENSDLAG00005010969) CTTNBP2NL (ENSDLAG00005010984) ENSDLAG00005011030 st7l (ENSDLAG00005011086) tox2 (ENSDLAG00005012281) SNTA1 (ENSDLAG00005012306) #21 cbfa2t2 (ENSDLAG00005012412) #22 NECAB1 (ENSDLAG00005012677) #23 ENSDLAG00005012710 TBC1D20 (ENSDLAG00005028710) ENSDLAG00005012780 CDH22 (ENSDLAG00005013300) TFAP2C (ENSDLAG00005013308) rtf2 (ENSDLAG00005026993) GCNT7 (ENSDLAG00005013362) eya2 (ENSDLAG00005013401) ENSDLAG00005013642 ENSDLAG00005013666 #27 ENSDLAG00005013709 #37 bloc1s1 (ENSDLAG00005015781) ENSDLAG00005015804 gls2b (ENSDLAG00005015882) Large yellow croaker MODERN SPECIES 478 aurka (ENSLCRG00005021191) ENSLCRG00005021193 prelid3b (ENSLCRG00005021196) ipo9 (ENSLCRG00005021228) shisa4 (ENSLCRG00005021290) LMOD1 (ENSLCRG00005021298) timm17a (ENSLCRG00005021299) rap1ab (ENSLCRG00005021300) INKA2 (ENSLCRG00005021302) KCND3 (ENSLCRG00005021304) CTTNBP2NL (ENSLCRG00005021309) wnt2ba (ENSLCRG00005021312) st7l (ENSLCRG00005021337) tox2 (ENSLCRG00005021471) SNTA1 (ENSLCRG00005021499) #21 cbfa2t2 (ENSLCRG00005021634) #22 NECAB3 (ENSLCRG00005022194) #23 rbck1 (ENSLCRG00005022205) tbc1d20 (ENSLCRG00005022211) ZNFX1 (ENSLCRG00005022240) CDH22 (ENSLCRG00005022262) tfap2c (ENSLCRG00005022266) rtf2 (ENSLCRG00005022276) GCNT7 (ENSLCRG00005022282) eya2 (ENSLCRG00005022288) tgm5l (ENSLCRG00005022303) pxmp4 (ENSLCRG00005022305) #27 itcha (ENSLCRG00005022370) #37 bloc1s1 (ENSLCRG00005022499) rdh5 (ENSLCRG00005022511) gls2b (ENSLCRG00005022519) Ovalentaria ANCESTRAL SPECIES 2 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Ovalentaria_B ANCESTRAL SPECIES 5 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Cichlidae ANCESTRAL SPECIES 1 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 2 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Haplochromini ANCESTRAL SPECIES 1 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a.g.b ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Haplochromini_A ANCESTRAL SPECIES ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a.g.b ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Haplochromini_B ANCESTRAL SPECIES ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a.g.b ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Eastern happy MODERN SPECIES 17 prelid3b (ENSACLG00000019614) ENSACLG00000019638 GNAS (ENSACLG00000019781) ipo9 (ENSACLG00000019807) shisa4 (ENSACLG00000019869) LMOD1 (ENSACLG00000019895) timm17a (ENSACLG00000019907) ENSACLG00000019927 INKA2 (ENSACLG00000019968) KCND3 (ENSACLG00000019983) CTTNBP2NL (ENSACLG00000020029) wnt2ba (ENSACLG00000020056) st7l (ENSACLG00000020077) tox2 (ENSACLG00000020146) SNTA1 (ENSACLG00000020269) #21 cbfa2t2 (ENSACLG00000020283) #22 NECAB3 (ENSACLG00000020364) #23 rbck1 (ENSACLG00000020380) tbc1d20 (ENSACLG00000020409) ZNFX1 (ENSACLG00000020441) CDH22 (ENSACLG00000020470) tfap2c (ENSACLG00000020525) rtf2 (ENSACLG00000020561) GCNT7 (ENSACLG00000020592) eya2 (ENSACLG00000020618) tgm5l (ENSACLG00000020666) itcha (ENSACLG00000020726) #37 bloc1s1 (ENSACLG00000020823) rdh5 (ENSACLG00000020839) gls2b (ENSACLG00000020848) ENSACLG00000020955 Zebra mbuna MODERN SPECIES 1108 prelid3b (ENSMZEG00005006164) ENSMZEG00005005670 GNAS (ENSMZEG00005005634) ipo9 (ENSMZEG00005005610) shisa4 (ENSMZEG00005005601) LMOD1 (ENSMZEG00005005597) timm17a (ENSMZEG00005005591) ENSMZEG00005005574 INKA2 (ENSMZEG00005005566) KCND3 (ENSMZEG00005005553) CTTNBP2NL (ENSMZEG00005005546) wnt2ba (ENSMZEG00005005533) st7l (ENSMZEG00005005492) tox2 (ENSMZEG00005005462) SNTA1 (ENSMZEG00005005431) #21 cbfa2t2 (ENSMZEG00005005384) #22 NECAB3 (ENSMZEG00005005332) #23 rbck1 (ENSMZEG00005005317) tbc1d20 (ENSMZEG00005005292) ZNFX1 (ENSMZEG00005005268) CDH22 (ENSMZEG00005005232) ENSMZEG00005005217 ENSMZEG00005005207 ENSMZEG00005005195 ENSMZEG00005005181 ENSMZEG00005005168 ENSMZEG00005005156 tfap2c (ENSMZEG00005005108) GCNT7 (ENSMZEG00005005090) rtf2 (ENSMZEG00005005069) eya2 (ENSMZEG00005005047) P. nyererei MODERN SPECIES 391 ENSPNYG00000013267 slc32a1 (ENSPNYG00000013253) GNAS (ENSPNYG00000013223) ipo9 (ENSPNYG00000013180) shisa4 (ENSPNYG00000013155) LMOD1 (ENSPNYG00000013146) timm17a (ENSPNYG00000013132) ENSPNYG00000013094 INKA2 (ENSPNYG00000013067) KCND3 (ENSPNYG00000013042) CTTNBP2NL (ENSPNYG00000012953) wnt2ba (ENSPNYG00000012903) st7l (ENSPNYG00000012845) tox2 (ENSPNYG00000012817) SNTA1 (ENSPNYG00000012803) #21 cbfa2t2 (ENSPNYG00000012766) #22 ENSPNYG00000012744 #23 rbck1 (ENSPNYG00000012666) tbc1d20 (ENSPNYG00000012613) ZNFX1 (ENSPNYG00000012569) CDH22 (ENSPNYG00000012427) tfap2c (ENSPNYG00000012368) GCNT7 (ENSPNYG00000012346) rtf2 (ENSPNYG00000012318) eya2 (ENSPNYG00000012291) Burton s mouthbrooder MODERN SPECIES 379 GNAS (ENSHBUG00000008915) prelid3b (ENSHBUG00000008888) ENSHBUG00000008870 ipo9 (ENSHBUG00000008849) shisa4 (ENSHBUG00000008786) LMOD1 (ENSHBUG00000000221) timm17a (ENSHBUG00000008770) ENSHBUG00000008741 INKA2 (ENSHBUG00000008704) KCND3 (ENSHBUG00000008689) CTTNBP2NL (ENSHBUG00000008548) wnt2ba (ENSHBUG00000008538) st7l (ENSHBUG00000008509) tox2 (ENSHBUG00000008408) SNTA1 (ENSHBUG00000008360) #21 cbfa2t2 (ENSHBUG00000008334) #22 ENSHBUG00000008240 #23 ENSHBUG00000008220 #23 rbck1 (ENSHBUG00000008208) tbc1d20 (ENSHBUG00000008192) ZNFX1 (ENSHBUG00000008159) CDH22 (ENSHBUG00000008135) Lyretail cichlid MODERN SPECIES 294 aurka (ENSNBRG00000004811) prelid3b (ENSNBRG00000005002) ENSNBRG00000005022 GNAS (ENSNBRG00000005102) ipo9 (ENSNBRG00000005251) shisa4 (ENSNBRG00000005691) LMOD1 (ENSNBRG00000005705) timm17a (ENSNBRG00000005748) ENSNBRG00000005772 KCND3 (ENSNBRG00000005803) CTTNBP2NL (ENSNBRG00000005830) wnt2ba (ENSNBRG00000005873) st7l (ENSNBRG00000005946) tox2 (ENSNBRG00000006005) SNTA1 (ENSNBRG00000006037) #21 cbfa2t2 (ENSNBRG00000006093) #22 ENSNBRG00000006132 #23 rbck1 (ENSNBRG00000006179) ZNFX1 (ENSNBRG00000006236) CDH22 (ENSNBRG00000006308) tfap2c (ENSNBRG00000006405) rtf2 (ENSNBRG00000006431) GCNT7 (ENSNBRG00000006446) eya2 (ENSNBRG00000006489) pxmp4 (ENSNBRG00000006589) #27 itcha (ENSNBRG00000006618) #37 bloc1s1 (ENSNBRG00000006675) rdh5 (ENSNBRG00000006686) gls2b (ENSNBRG00000006743) CELA1 (ENSNBRG00000006912) ENSNBRG00000006924 Nile tilapia MODERN SPECIES 17 prelid3b (ENSONIG00000007211) ENSONIG00000011492 GNAS (ENSONIG00000011493) ipo9 (ENSONIG00000011495) shisa4 (ENSONIG00000011497) LMOD1 (ENSONIG00000034043) timm17a (ENSONIG00000034127) ENSONIG00000011501 INKA2 (ENSONIG00000040005) KCND3 (ENSONIG00000011507) CTTNBP2NL (ENSONIG00000011512) wnt2ba (ENSONIG00000012283) st7l (ENSONIG00000011515) tox2 (ENSONIG00000039601) SNTA1 (ENSONIG00000006790) #21 cbfa2t2 (ENSONIG00000006794) #22 NECAB3 (ENSONIG00000006799) #23 rbck1 (ENSONIG00000006803) tbc1d20 (ENSONIG00000006805) ZNFX1 (ENSONIG00000006808) CDH22 (ENSONIG00000006811) tfap2c (ENSONIG00000006816) rtf2 (ENSONIG00000006820) GCNT7 (ENSONIG00000006826) eya2 (ENSONIG00000006828) tgm5l (ENSONIG00000006833) pxmp4 (ENSONIG00000028466) #27 itcha (ENSONIG00000006836) #37 bloc1s1 (ENSONIG00000006840) rdh5 (ENSONIG00000006842) gls2b (ENSONIG00000006844) Midas cichlid MODERN SPECIES 423 ENSACIG00000015917 ENSACIG00000015910 GNAS (ENSACIG00000015888) ipo9 (ENSACIG00000015855) shisa4 (ENSACIG00000015840) LMOD1 (ENSACIG00000015796) timm17a (ENSACIG00000015780) ENSACIG00000015767 INKA2 (ENSACIG00000015754) KCND3 (ENSACIG00000015735) CTTNBP2NL (ENSACIG00000015665) wnt2ba (ENSACIG00000015642) st7l (ENSACIG00000015605) tox2 (ENSACIG00000015582) SNTA1 (ENSACIG00000015523) #21 cbfa2t2 (ENSACIG00000015486) #22 NECAB3 (ENSACIG00000015378) #23 rbck1 (ENSACIG00000015287) tbc1d20 (ENSACIG00000015263) ZNFX1 (ENSACIG00000015220) ENSACIG00000015207 CDH22 (ENSACIG00000015183) tfap2c (ENSACIG00000015162) GCNT7 (ENSACIG00000015151) rtf2 (ENSACIG00000015119) eya2 (ENSACIG00000015079) tgm5l (ENSACIG00000015060) pxmp4 (ENSACIG00000015031) #27 itcha (ENSACIG00000014885) #37 bloc1s1 (ENSACIG00000014831) rdh5 (ENSACIG00000014791) Pomacentridae ANCESTRAL SPECIES 3 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 851 cbfa2t2 (ENSSPAG00000009478) #22 ENSSPAG00000009465 #23 ENSSPAG00000009458 #23 rbck1 (ENSSPAG00000009432) tbc1d20 (ENSSPAG00000009409) ZNFX1 (ENSSPAG00000009381) CDH22 (ENSSPAG00000009349) Bicolor damselfish MODERN SPECIES 407 prelid3b (ENSSPAG00000015232) ENSSPAG00000015214 GNAS (ENSSPAG00000015190) ipo9 (ENSSPAG00000015136) shisa4 (ENSSPAG00000015128) LMOD1 (ENSSPAG00000015118) timm17a (ENSSPAG00000015096) ENSSPAG00000015076 INKA2 (ENSSPAG00000015073) KCND3 (ENSSPAG00000015054) CTTNBP2NL (ENSSPAG00000015038) wnt2ba (ENSSPAG00000015019) st7l (ENSSPAG00000014900) tox2 (ENSSPAG00000014838) SNTA1 (ENSSPAG00000014819) #21 cbfa2t2 (ENSSPAG00000014789) #22 Pomacentridae_A ANCESTRAL SPECIES 38 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Amphiprion ANCESTRAL SPECIES 57 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b Clown anemonefish MODERN SPECIES 1557 cbfa2t2 (ENSAOCG00000020886) #22 ENSAOCG00000020908 #23 rbck1 (ENSAOCG00000020929) tbc1d20 (ENSAOCG00000020979) ZNFX1 (ENSAOCG00000021079) Orange clownfish MODERN SPECIES 20 snrpb (ENSAPEG00000021585) ctsa (ENSAPEG00000021535) ENSAPEG00000021523 PIK3C2B (ENSAPEG00000021430) ENSAPEG00000021412 ENSAPEG00000021402 ASCL5 (ENSAPEG00000021385) ENSAPEG00000021362 aldh4a1 (ENSAPEG00000021348) ENSAPEG00000021333 ENSAPEG00000021324 AMIGO3 (ENSAPEG00000021314) RNF123 (ENSAPEG00000021224) tox2 (ENSAPEG00000021099) SNTA1 (ENSAPEG00000021080) #21 cbfa2t2 (ENSAPEG00000021039) #22 NECAB3 (ENSAPEG00000021014) #23 tbc1d20 (ENSAPEG00000020998) rbck1 (ENSAPEG00000020959) ZNFX1 (ENSAPEG00000020946) ENSAPEG00000020869 ENSAPEG00000020848 ENSAPEG00000020831 ENSAPEG00000020818 ENSAPEG00000020800 ENSAPEG00000020791 ENSAPEG00000020780 ENSAPEG00000020733 ENSAPEG00000020683 ENSAPEG00000020657 ENSAPEG00000020624 Spiny chromis MODERN SPECIES 2 ENSAPOG00000020733 GNAS (ENSAPOG00000020789) ipo9 (ENSAPOG00000020880) shisa4 (ENSAPOG00000000594) LMOD1 (ENSAPOG00000020896) timm17a (ENSAPOG00000020923) ENSAPOG00000020963 ENSAPOG00000020980 INKA2 (ENSAPOG00000020995) KCND3 (ENSAPOG00000021043) CTTNBP2NL (ENSAPOG00000021157) wnt2ba (ENSAPOG00000021199) st7l (ENSAPOG00000021262) tox2 (ENSAPOG00000000847) SNTA1 (ENSAPOG00000021321) #21 cbfa2t2 (ENSAPOG00000021418) #22 NECAB3 (ENSAPOG00000021458) #23 rbck1 (ENSAPOG00000021491) tbc1d20 (ENSAPOG00000021502) ZNFX1 (ENSAPOG00000021578) CDH22 (ENSAPOG00000021657) ENSAPOG00000021675 Atherinomorphae ANCESTRAL SPECIES 2 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Cyprinodontiformes ANCESTRAL SPECIES 2 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00940000163895 ENSGT01060000248530.C.d.x.b ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 Aplocheiloidei ANCESTRAL SPECIES 10 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00940000163895 ENSGT01060000248530.C.d.x.b ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 Mangrove rivulus MODERN SPECIES 11 prelid3b (ENSKMAG00000013055) ENSKMAG00000013126 GNAS (ENSKMAG00000013306) ipo9 (ENSKMAG00000013352) shisa4 (ENSKMAG00000013426) LMOD1 (ENSKMAG00000013439) timm17a (ENSKMAG00000013455) rap1ab (ENSKMAG00000013480) INKA2 (ENSKMAG00000013505) KCND3 (ENSKMAG00000013514) CTTNBP2NL (ENSKMAG00000013548) wnt2ba (ENSKMAG00000013565) st7l (ENSKMAG00000013608) tox2 (ENSKMAG00000013666) SNTA1 (ENSKMAG00000013690) #21 cbfa2t2 (ENSKMAG00000013728) #22 NECAB3 (ENSKMAG00000013778) #23 rbck1 (ENSKMAG00000013826) tbc1d20 (ENSKMAG00000013864) ZNFX1 (ENSKMAG00000013898) CDH22 (ENSKMAG00000013931) ENSKMAG00000013976 tfap2c (ENSKMAG00000014011) rtf2 (ENSKMAG00000014071) GCNT7 (ENSKMAG00000014094) eya2 (ENSKMAG00000014120) tgm5l (ENSKMAG00000014174) pxmp4 (ENSKMAG00000014204) #27 itcha (ENSKMAG00000014234) #37 bloc1s1 (ENSKMAG00000014318) gls2b (ENSKMAG00000014362) Turquoise killifish MODERN SPECIES 1619 ENSNFUG00015022784 ipo9 (ENSNFUG00015022807) shisa4 (ENSNFUG00015022877) CR628365.1 (ENSNFUG00015022881) timm17a (ENSNFUG00015022888) rap1ab (ENSNFUG00015022892) FAM212B (ENSNFUG00015022898) KCND3 (ENSNFUG00015022902) ENSNFUG00015022913 CTTNBP2NL (ENSNFUG00015022919) WNT2BA (ENSNFUG00015022923) st7l (ENSNFUG00015022943) TOX2 (ENSNFUG00015023136) ENSNFUG00015023138 SNTA1 (ENSNFUG00015023145) #21 CBFA2T2 (ENSNFUG00015023157) #22 NECAB3 (ENSNFUG00015023213) #23 RBCK1 (ENSNFUG00015023220) TBC1D20 (ENSNFUG00015023226) ENSNFUG00015023237 ENSNFUG00015023238 ZNFX1 (ENSNFUG00015023246) CABZ01034923.1 (ENSNFUG00015004738) ENSNFUG00015004888 tfap2c (ENSNFUG00015004896) RTFDC1 (ENSNFUG00015004915) GCNT7 (ENSNFUG00015004943) ENSNFUG00015004990 ENSNFUG00015004996 eya2 (ENSNFUG00015005070) tgm5l (ENSNFUG00015005493) Cyprinodontoidei ANCESTRAL SPECIES 4 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Poeciliinae ANCESTRAL SPECIES 4 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00390000010463.a.a.a.a Poecilia ANCESTRAL SPECIES 23 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b NAME_6 ANCESTRAL SPECIES 7 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b Amazon molly MODERN SPECIES 254 prelid3b (ENSPFOG00000004673) tubb1 (ENSPFOG00000004579) GNAS (ENSPFOG00000004527) ipo9 (ENSPFOG00000004346) shisa4 (ENSPFOG00000022821) LMOD1 (ENSPFOG00000004029) timm17a (ENSPFOG00000004005) rap1ab (ENSPFOG00000003908) INKA2 (ENSPFOG00000003848) KCND3 (ENSPFOG00000003837) CTTNBP2NL (ENSPFOG00000003693) wnt2ba (ENSPFOG00000003624) st7l (ENSPFOG00000003534) tox2 (ENSPFOG00000003305) SNTA1 (ENSPFOG00000003151) #21 cbfa2t2 (ENSPFOG00000003025) #22 NECAB3 (ENSPFOG00000002548) #23 rbck1 (ENSPFOG00000002398) tbc1d20 (ENSPFOG00000002260) ZNFX1 (ENSPFOG00000002172) Sailfin molly MODERN SPECIES 263 tox2 (ENSPLAG00000003416) SNTA1 (ENSPLAG00000003430) #21 cbfa2t2 (ENSPLAG00000003455) #22 ENSPLAG00000003475 #23 rbck1 (ENSPLAG00000003483) tbc1d20 (ENSPLAG00000003492) ZNFX1 (ENSPLAG00000003505) Guppy MODERN SPECIES 457 ENSPREG00000008878 ENSPREG00000008885 GNAS (ENSPREG00000008899) ipo9 (ENSPREG00000008970) shisa4 (ENSPREG00000009085) LMOD1 (ENSPREG00000009093) ENSPREG00000009105 rap1ab (ENSPREG00000009158) INKA2 (ENSPREG00000009168) KCND3 (ENSPREG00000009190) CTTNBP2NL (ENSPREG00000009234) wnt2ba (ENSPREG00000009263) st7l (ENSPREG00000009286) tox2 (ENSPREG00000009327) SNTA1 (ENSPREG00000009350) #21 cbfa2t2 (ENSPREG00000009386) #22 NECAB3 (ENSPREG00000009455) #23 rbck1 (ENSPREG00000009475) tbc1d20 (ENSPREG00000009507) ZNFX1 (ENSPREG00000009540) pxk (ENSPREG00000009588) pdhb (ENSPREG00000009627) ENSPREG00000009642 ccdc71 (ENSPREG00000009645) ENSPREG00000009654 ENSPREG00000009666 NISCH (ENSPREG00000009687) ENSPREG00000009717 hgh1 (ENSPREG00000009723) zgc:153675 (ENSPREG00000009742) rbbp5 (ENSPREG00000009754) Platyfish MODERN SPECIES 12 prelid3b (ENSXMAG00000006052) ENSXMAG00000026750 GNAS (ENSXMAG00000021862) ipo9 (ENSXMAG00000006013) shisa4 (ENSXMAG00000006012) LMOD1 (ENSXMAG00000006007) timm17a (ENSXMAG00000025518) rap1ab (ENSXMAG00000005986) INKA2 (ENSXMAG00000029540) KCND3 (ENSXMAG00000019946) CTTNBP2NL (ENSXMAG00000023248) wnt2ba (ENSXMAG00000005971) st7l (ENSXMAG00000005934) tox2 (ENSXMAG00000005925) SNTA1 (ENSXMAG00000023046) #21 cbfa2t2 (ENSXMAG00000013414) #22 NECAB3 (ENSXMAG00000005908) #23 rbck1 (ENSXMAG00000005890) tbc1d20 (ENSXMAG00000005880) ZNFX1 (ENSXMAG00000005859) CDH22 (ENSXMAG00000005816) tfap2c (ENSXMAG00000005803) GCNT7 (ENSXMAG00000026994) rtf2 (ENSXMAG00000029796) ENSXMAG00000026110 eya2 (ENSXMAG00000019373) tgm5l (ENSXMAG00000019372) pxmp4 (ENSXMAG00000019371) #27 itcha (ENSXMAG00000019367) #37 gls2b (ENSXMAG00000019361) CELA1 (ENSXMAG00000028536) NAME_4 ANCESTRAL SPECIES 14 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 Sheepshead minnow MODERN SPECIES 417 tox2 (ENSCVAG00000002674) SNTA1 (ENSCVAG00000002671) #21 cbfa2t2 (ENSCVAG00000002664) #22 NECAB3 (ENSCVAG00000002655) #23 rbck1 (ENSCVAG00000002649) tbc1d20 (ENSCVAG00000002642) ZNFX1 (ENSCVAG00000002631) CDH22 (ENSCVAG00000002614) tfap2c (ENSCVAG00000002598) rtf2 (ENSCVAG00000000077) GCNT7 (ENSCVAG00000002586) Mummichog MODERN SPECIES 2369 prelid3b (ENSFHEG00000000792) ENSFHEG00000016409 GNAS (ENSFHEG00000016449) ipo9 (ENSFHEG00000016546) shisa4 (ENSFHEG00000016553) LMOD1 (ENSFHEG00000016560) timm17a (ENSFHEG00000016582) ENSFHEG00000000416 INKA2 (ENSFHEG00000016594) KCND3 (ENSFHEG00000000417) CTTNBP2NL (ENSFHEG00000016629) wnt2ba (ENSFHEG00000016647) st7l (ENSFHEG00000016735) tox2 (ENSFHEG00000016824) SNTA1 (ENSFHEG00000016832) #21 cbfa2t2 (ENSFHEG00000016871) #22 NECAB3 (ENSFHEG00000016893) #23 ENSFHEG00000016901 #23 rbck1 (ENSFHEG00000016918) tbc1d20 (ENSFHEG00000016946) ZNFX1 (ENSFHEG00000016960) Oryzias ANCESTRAL SPECIES 1 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00940000154709.a.b.a.a Oryzias_b ANCESTRAL SPECIES 3 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00390000010923 ENSGT00940000160402 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT00940000154709.a.b.a.a Javanese ricefish MODERN SPECIES 19 ENSOJAG00000019736 GNAS (ENSOJAG00000019491) ipo9 (ENSOJAG00000019267) shisa4 (ENSOJAG00000019244) ENSOJAG00000019226 timm17a (ENSOJAG00000019182) ENSOJAG00000019147 INKA2 (ENSOJAG00000019143) KCND3 (ENSOJAG00000019113) CTTNBP2NL (ENSOJAG00000018947) wnt2ba (ENSOJAG00000018940) st7l (ENSOJAG00000018696) ENSOJAG00000018686 tox2 (ENSOJAG00000018644) SNTA1 (ENSOJAG00000018630) #21 cbfa2t2 (ENSOJAG00000018411) #22 NECAB3 (ENSOJAG00000018385) #23 rbck1 (ENSOJAG00000018359) tbc1d20 (ENSOJAG00000018318) ZNFX1 (ENSOJAG00000018200) ENSOJAG00000018159 CDH22 (ENSOJAG00000018037) tfap2c (ENSOJAG00000018006) GCNT7 (ENSOJAG00000017996) rtf2 (ENSOJAG00000017988) eya2 (ENSOJAG00000017619) tgm5l (ENSOJAG00000017581) pxmp4 (ENSOJAG00000017570) #27 itcha (ENSOJAG00000015231) #37 bloc1s1 (ENSOJAG00000015055) rdh5 (ENSOJAG00000015049) Indian medaka MODERN SPECIES 8 prelid3b (ENSOMEG00000017775) ENSOMEG00000017730 GNAS (ENSOMEG00000017665) ipo9 (ENSOMEG00000017601) shisa4 (ENSOMEG00000017517) LMOD1 (ENSOMEG00000017498) timm17a (ENSOMEG00000017464) rap1ab (ENSOMEG00000017428) INKA2 (ENSOMEG00000017386) KCND3 (ENSOMEG00000000673) CTTNBP2NL (ENSOMEG00000017321) wnt2ba (ENSOMEG00000017272) st7l (ENSOMEG00000017227) tox2 (ENSOMEG00000017150) SNTA1 (ENSOMEG00000017026) #21 cbfa2t2 (ENSOMEG00000016995) #22 NECAB3 (ENSOMEG00000016885) #23 rbck1 (ENSOMEG00000016829) tbc1d20 (ENSOMEG00000016792) ZNFX1 (ENSOMEG00000000420) CDH22 (ENSOMEG00000016667) tfap2c (ENSOMEG00000016630) rtf2 (ENSOMEG00000000416) GCNT7 (ENSOMEG00000016509) eya2 (ENSOMEG00000016485) tgm5l (ENSOMEG00000016409) pxmp4 (ENSOMEG00000016340) #27 itcha (ENSOMEG00000016326) #37 bloc1s1 (ENSOMEG00000016278) rdh5 (ENSOMEG00000016266) ENSOMEG00000016223 Oryzias_a ANCESTRAL SPECIES 5 ENSGT00950000182810.A.a.a.a ENSGT00940000159809 ENSGT00940000156300.i ENSGT00390000008224 ENSGT00730000111186 ENSGT00940000159825.a.b ENSGT00390000017780.f ENSGT00940000165619.b ENSGT00530000063849.B ENSGT00940000155343.a.b ENSGT00950000182852.B.a ENSGT00940000166225 ENSGT00390000000873.a.a ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000166000 ENSGT00390000014944.a ENSGT00940000155154.b ENSGT00940000159376 ENSGT00950000182848.c.b.a.b ENSGT00940000160402 ENSGT00390000010923 ENSGT00950000182978.A.a.b.b ENSGT01050000244866.D.b.a ENSGT00390000001562 #27 ENSGT00940000157014.f #37 ENSGT00390000002689 ENSGT00940000161168 ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.h.a.b.b.b Japanese Medaka HdrR MODERN SPECIES 19 prelid3b (ENSORLG00000005656) ENSORLG00000027123 ENSORLG00000005722 ipo9 (ENSORLG00000005758) shisa4 (ENSORLG00000005773) LMOD1 (ENSORLG00000005777) timm17a (ENSORLG00000022383) rap1ab (ENSORLG00000005814) INKA2 (ENSORLG00000028015) KCND3 (ENSORLG00000005848) CTTNBP2NL (ENSORLG00000005859) wnt2ba (ENSORLG00000005880) st7l (ENSORLG00000005920) tox2 (ENSORLG00000005944) SNTA1 (ENSORLG00000005966) #21 cbfa2t2 (ENSORLG00000006021) #22 NECAB3 (ENSORLG00000025846) #23 rbck1 (ENSORLG00000006036) tbc1d20 (ENSORLG00000006067) ZNFX1 (ENSORLG00000006096) CDH22 (ENSORLG00000006125) ENSORLG00000029368 ENSORLG00000025438 ENSORLG00000023068 tfap2c (ENSORLG00000006158) rtf2 (ENSORLG00000006176) GCNT7 (ENSORLG00000001164) eya2 (ENSORLG00000006206) tgm5l (ENSORLG00000006224) pxmp4 (ENSORLG00000027794) #27 itcha (ENSORLG00000006280) #37 Chinese medaka MODERN SPECIES 970 KCND3 (ENSOSIG00000009279) ENSOSIG00000009280 CTTNBP2NL (ENSOSIG00000009283) wnt2ba (ENSOSIG00000009289) st7l (ENSOSIG00000009912) tox2 (ENSOSIG00000012620) SNTA1 (ENSOSIG00000012628) #21 cbfa2t2 (ENSOSIG00000012658) #22 NECAB3 (ENSOSIG00000012705) #23 rbck1 (ENSOSIG00000012708) tbc1d20 (ENSOSIG00000012710) ZNFX1 (ENSOSIG00000012718) CDH22 (ENSOSIG00000012732) tfap2c (ENSOSIG00000012739) Tiger tail seahorse MODERN SPECIES 516 arl8ba (ENSHCOG00000000920) edem1 (ENSHCOG00000000928) gnat1 (ENSHCOG00000000934) sema3fa (ENSHCOG00000000939) ENSHCOG00000000945 CAMKV (ENSHCOG00000000949) ENSHCOG00000000958 INKA2 (ENSHCOG00000000962) KCND3 (ENSHCOG00000000042) CTTNBP2NL (ENSHCOG00000000969) wnt2ba (ENSHCOG00000000973) st7l (ENSHCOG00000000984) tox2 (ENSHCOG00000000993) SNTA1 (ENSHCOG00000001001) #21 ENSHCOG00000001005 cbfa2t2 (ENSHCOG00000001009) #22 ENSHCOG00000001013 sp1 (ENSHCOG00000001021) ENSHCOG00000001023 tarbp2 (ENSHCOG00000001027) sp7 (ENSHCOG00000001032) igsf8 (ENSHCOG00000001034) soat2 (ENSHCOG00000001042) KIF5A (ENSHCOG00000001057) dctn2 (ENSHCOG00000001072) ddit3 (ENSHCOG00000001079) mars1 (ENSHCOG00000001090) ARHGAP9 (ENSHCOG00000001098) ENSHCOG00000001104 gli1 (ENSHCOG00000001116) INHBC (ENSHCOG00000001128) Pinecone sodierfish MODERN SPECIES 19 aurka (ENSMMDG00005010658) prelid3b (ENSMMDG00005010660) TUBB1 (ENSMMDG00005010661) ipo9 (ENSMMDG00005010677) shisa4 (ENSMMDG00005010729) LMOD1 (ENSMMDG00005010731) timm17a (ENSMMDG00005010734) ENSMMDG00005010741 INKA2 (ENSMMDG00005010756) KCND3 (ENSMMDG00005010757) CTTNBP2NL (ENSMMDG00005010766) wnt2ba (ENSMMDG00005010772) st7l (ENSMMDG00005010788) tox2 (ENSMMDG00005011331) SNTA1 (ENSMMDG00005011334) #21 cbfa2t2 (ENSMMDG00005011384) #22 ENSMMDG00005012962 #23 ENSMMDG00005012964 #23 rbck1 (ENSMMDG00005012968) tbc1d20 (ENSMMDG00005012970) ZNFX1 (ENSMMDG00005012991) CDH22 (ENSMMDG00005013765) tfap2c (ENSMMDG00005013769) rtf2 (ENSMMDG00005013770) GCNT7 (ENSMMDG00005013771) eya2 (ENSMMDG00005013773) tgm5l (ENSMMDG00005013776) pxmp4 (ENSMMDG00005013778) #27 itcha (ENSMMDG00005013833) #37 bloc1s1 (ENSMMDG00005018410) rdh5 (ENSMMDG00005018423) Cod MODERN SPECIES 4 prelid3b (ENSGMOG00000007909) ENSGMOG00000027552 ENSGMOG00000007896 ipo9 (ENSGMOG00000007883) shisa4 (ENSGMOG00000007879) ENSGMOG00000036519 timm17a (ENSGMOG00000007865) ENSGMOG00000007859 INKA2 (ENSGMOG00000022329) KCND3 (ENSGMOG00000007849) CTTNBP2NL (ENSGMOG00000007846) ENSGMOG00000030126 st7l (ENSGMOG00000007834) tox2 (ENSGMOG00000000815) SNTA1 (ENSGMOG00000000801) #21 cbfa2t2 (ENSGMOG00000000777) #22 NECAB3 (ENSGMOG00000000759) #23 ENSGMOG00000000738 ENSGMOG00000000715 ENSGMOG00000000630 ENSGMOG00000015951 ENSGMOG00000026965 tfap2c (ENSGMOG00000013321) ENSGMOG00000013312 rtf2 (ENSGMOG00000013299) eya2 (ENSGMOG00000013279) ENSGMOG00000013259 ENSGMOG00000013252 #27 ENSGMOG00000013219 #37 bloc1s1 (ENSGMOG00000013215) ENSGMOG00000013208 Protacanthopterygii ANCESTRAL SPECIES 31 ENSGT00940000159430 ENSGT00390000012914 ENSGT00940000163348 ENSGT01030000234623.a.a.a.a.a ENSGT00940000160207.a ENSGT00940000155094.a ENSGT00390000006008 ENSGT00940000158197.c ENSGT00940000160694.g.a ENSGT01030000234597.a.b.b.f.i ENSGT00940000166655 ENSGT00940000156407 ENSGT01100000263529.a.a.a.a.b.c.b.g.b ENSGT00940000158764.g ENSGT00950000182863.A.a.b #21 ENSGT00950000183176.a #22 ENSGT00950000183131.a.f #23 ENSGT00940000157014.f #37 ENSGT00390000001562 #27 ENSGT00950000182978.A.a.b.b.c ENSGT00390000010923.c ENSGT00940000160402 ENSGT00390000010923.d ENSGT00950000182848.c.b.a.b ENSGT00940000159376 ENSGT00940000155154.b ENSGT00550000074997 ENSGT01070000254033 ENSGT00940000155052 ENSGT00730000111020.b.b ENSGT00940000153725.a.a Northern pike MODERN SPECIES 16 ENSELUG00000013234 FNDC11 (ENSELUG00000013250) stk35l (ENSELUG00000013284) HELZ2 (ENSELUG00000013322) ENSELUG00000034691 STMN3 (ENSELUG00000028288) ENSELUG00000031880 arfrp1 (ENSELUG00000013412) ENSELUG00000013426 CHRNA4 (ENSELUG00000013441) KCNQ2 (ENSELUG00000013558) RALGAPB (ENSELUG00000013702) ENSELUG00000028964 tox2 (ENSELUG00000013810) SNTA1 (ENSELUG00000013871) #21 cbfa2t2 (ENSELUG00000013949) #22 NECAB3 (ENSELUG00000014035) #23 itcha (ENSELUG00000014154) #37 pxmp4 (ENSELUG00000001547) #27 tgm5l (ENSELUG00000000519) ENSELUG00000014263 eya2 (ENSELUG00000014341) ENSELUG00000014363 GCNT7 (ENSELUG00000014370) rtf2 (ENSELUG00000014386) tfap2c (ENSELUG00000014423) CDH22 (ENSELUG00000014454) ENSELUG00000031016 ZNFX1 (ENSELUG00000014505) ddx27 (ENSELUG00000014535) ENSELUG00000027297 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00950000183176.a.g #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00950000183176.a.g #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00950000183176.a.g #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00950000183176.a.g #22 Chinook salmon MODERN SPECIES 201 ENSOTSG00005014871 #22 ENSOTSG00005014869 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 20 ENSGT00940000161320.e.a.a ENSGT00390000004215.a.b.a.k.a ENSGT00940000159430.c ENSGT00390000012914.k.b ENSGT01030000234623.a.a.a.a.a.f ENSGT00940000160207.a ENSGT00940000155094.a.d ENSGT00940000158197.c.f ENSGT00940000166655.j ENSGT01030000234597.a.b.b.f.i.a ENSGT00940000156407.b ENSGT00940000160093.a.a ENSGT00700000104550.a.j.b.d.a ENSGT00940000158764.g.a ENSGT00950000182863.A.a.b.g.b #21 ENSGT00950000183176.a.h.a #22 ENSGT00950000183131.a.f.m.b #23 ENSGT00940000157014.f.c #37 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b.d ENSGT00390000010923.d ENSGT00940000160402.b ENSGT00950000182848.c.b.a.b.e ENSGT00940000159376.d ENSGT00940000155154.b.t ENSGT00730000111020.b.b.c ENSGT00940000178990 ENSGT00930000150941.xb ENSGT00510000047836.g.a ENSGT00390000016206.n ENSGT01100000263545.a.b.d.b.f Huchen MODERN SPECIES 107 tox2 (ENSHHUG00000022632) SNTA1 (ENSHHUG00000022642) #21 cbfa2t2 (ENSHHUG00000022654) #22 NECAB3 (ENSHHUG00000022714) #23 itcha (ENSHHUG00000022741) #37 tgm5l (ENSHHUG00000022888) ENSHHUG00000022941 eya2 (ENSHHUG00000022945) rtf2 (ENSHHUG00000022990) GCNT7 (ENSHHUG00000023013) tfap2c (ENSHHUG00000023022) CDH22 (ENSHHUG00000023060) Salmoninae_a ANCESTRAL SPECIES 21 ENSGT00940000161320.e.a.a ENSGT00390000004215.a.b.a.k.a ENSGT00940000159430.c ENSGT00390000012914.k.b ENSGT01030000234623.a.a.a.a.a.f ENSGT00940000160207.a ENSGT00940000155094.a.d ENSGT00940000158197.c.f ENSGT00940000166655.j ENSGT01030000234597.a.b.b.f.i.a ENSGT00940000156407.b ENSGT00940000160093.a.a ENSGT00700000104550.a.j.b.d.a ENSGT00940000158764.g.a ENSGT00950000182863.A.a.b.g.b #21 ENSGT00950000183176.a.h.a #22 ENSGT00950000183131.a.f.m.b #23 ENSGT00940000157014.f.c #37 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b.d ENSGT00940000160402.b ENSGT00390000010923.d ENSGT00950000182848.c.b.a.b.e ENSGT00940000159376.d ENSGT00940000155154.b.t ENSGT00730000111020.b.b.c ENSGT00930000150941.xb ENSGT00510000047836.g.a ENSGT00390000016206.n ENSGT01100000263545.a.b.d.b.f ENSGT00990000211482 Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00940000161320.e.a.a ENSGT00390000004215.a.b.a.k.a ENSGT00940000159430.c ENSGT00390000012914.k.b ENSGT01030000234623.a.a.a.a.a.f ENSGT00940000160207.a ENSGT00940000155094.a.d ENSGT00940000166655.j ENSGT01030000234597.a.b.b.f.i.a ENSGT00940000156407.b ENSGT00940000160093.a.a ENSGT00700000104550.a.j.b.d.a ENSGT00940000158764.g.a ENSGT00950000182863.A.a.b.g.b #21 ENSGT01030000239633 ENSGT00950000183176.a.h.a #22 ENSGT00950000183131.a.f.m.b #23 ENSGT00940000157014.f.c #37 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b.d ENSGT00940000160402.b ENSGT00390000010923.d ENSGT00950000182848.c.b.a.b.e ENSGT00940000159376.d ENSGT01030000234565.a.b.b.b.b.f.b.b.b.a.a.a.a.b.a.a ENSGT00940000155154.b.t ENSGT00730000111020.b.b.c ENSGT00510000047836.g.a ENSGT00390000016206.n ENSGT01100000263545.a.b.d.b.f ENSGT00990000211482 Oncorhynchus_a ANCESTRAL SPECIES 3 ENSGT00940000161320.e.a.a ENSGT00390000004215.a.b.a.k.a ENSGT00940000159430.c ENSGT00390000012914.k.b ENSGT01030000234623.a.a.a.a.a.f ENSGT00940000160207.a ENSGT00940000155094.a.d ENSGT00940000166655.j ENSGT01030000234597.a.b.b.f.i.a ENSGT00940000156407.b ENSGT00940000160093.a.a ENSGT00700000104550.a.j.b.d.a ENSGT00940000158764.g.a ENSGT00950000182863.A.a.b.g.b #21 ENSGT01030000239633 ENSGT00950000183176.a.h.a #22 ENSGT00950000183131.a.f.m.b #23 ENSGT00940000157014.f.c #37 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b.d ENSGT00940000160402.b ENSGT00390000010923.d ENSGT00950000182848.c.b.a.b.e ENSGT00940000159376.d ENSGT00940000155154.b.t ENSGT00730000111020.b.b.c ENSGT00510000047836.g.a ENSGT00390000016206.n ENSGT01100000263545.a.b.d.b.f ENSGT00940000165387.b.d ENSGT00950000182905.b.a Chinook salmon MODERN SPECIES 11 ENSOTSG00005046136 tcf15 (ENSOTSG00005046135) ENSOTSG00005045723 slc2a10 (ENSOTSG00005045718) tp53rk (ENSOTSG00005045717) SERINC3 (ENSOTSG00005045508) ENSOTSG00005045504 ENSOTSG00005045503 ENSOTSG00005045499 STMN3 (ENSOTSG00005045498) arfrp1 (ENSOTSG00005045496) KCNQ2 (ENSOTSG00005045047) RALGAPB (ENSOTSG00005044947) tox2 (ENSOTSG00005044943) SNTA1 (ENSOTSG00005044938) #21 cbfa2t2 (ENSOTSG00005044919) #22 ENSOTSG00005044917 #23 ENSOTSG00005044913 itcha (ENSOTSG00005040151) #37 tgm5l (ENSOTSG00005040127) eya2 (ENSOTSG00005040122) GCNT7 (ENSOTSG00005040117) rtf2 (ENSOTSG00005040115) tfap2c (ENSOTSG00005040113) ENSOTSG00005040112 CDH22 (ENSOTSG00005040063) ZNFX1 (ENSOTSG00005040048) ENSOTSG00005040045 pcif1 (ENSOTSG00005038683) pltp (ENSOTSG00005038646) ENSOTSG00005038085 Coho salmon MODERN SPECIES ENSOKIG00005001203 ENSOKIG00005001213 ENSOKIG00005001232 slc2a10 (ENSOKIG00005001260) ENSOKIG00005001304 ENSOKIG00005001399 ENSOKIG00005001402 ENSOKIG00005001433 STMN3 (ENSOKIG00005001497) arfrp1 (ENSOKIG00005001500) KCNQ2 (ENSOKIG00005001577) RALGAPB (ENSOKIG00005001945) tox2 (ENSOKIG00005002146) SNTA1 (ENSOKIG00005002210) #21 ENSOKIG00005002248 cbfa2t2 (ENSOKIG00005002304) #22 NECAB3 (ENSOKIG00005002434) #23 itcha (ENSOKIG00005002526) #37 tgm5l (ENSOKIG00005002966) eya2 (ENSOKIG00005002984) rtf2 (ENSOKIG00005003019) GCNT7 (ENSOKIG00005003024) tfap2c (ENSOKIG00005003032) CDH22 (ENSOKIG00005003075) ZNFX1 (ENSOKIG00005003123) ENSOKIG00005003132 DNTTIP1 (ENSOKIG00005003139) pcif1 (ENSOKIG00005003194) pltp (ENSOKIG00005003504) ENSOKIG00005003565 cyp24a1 (ENSOKIG00005003714) Rainbow trout MODERN SPECIES 8 slc2a10 (ENSOMYG00000042804) ENSOMYG00000041949 ENSOMYG00000052184 ENSOMYG00000041791 ENSOMYG00000041776 ENSOMYG00000041773 ENSOMYG00000041760 ENSOMYG00000065926 ENSOMYG00000041748 arfrp1 (ENSOMYG00000041740) ENSOMYG00000040740 ENSOMYG00000040334 tox2 (ENSOMYG00000040209) SNTA1 (ENSOMYG00000040147) #21 ENSOMYG00000040126 cbfa2t2 (ENSOMYG00000039917) #22 ENSOMYG00000039772 ENSOMYG00000039748 #23 ENSOMYG00000052223 #23 itcha (ENSOMYG00000034058) #37 ENSOMYG00000044275 eya2 (ENSOMYG00000044257) GCNT7 (ENSOMYG00000044241) rtf2 (ENSOMYG00000044237) tfap2c (ENSOMYG00000044221) ENSOMYG00000044139 ENSOMYG00000054384 ENSOMYG00000044117 ENSOMYG00000044106 pcif1 (ENSOMYG00000044087) ENSOMYG00000044051 Salmo ANCESTRAL SPECIES 62 ENSGT00940000161320.e.a.a ENSGT00390000004215.a.b.a.k.a ENSGT00940000159430.c ENSGT00390000012914.k.b ENSGT01030000234623.a.a.a.a.a.f ENSGT00940000160207.a ENSGT00940000155094.a.d ENSGT00940000158197.c.f ENSGT00940000166655.j ENSGT01030000234597.a.b.b.f.i.a ENSGT00940000156407.b ENSGT00940000160093.a.a ENSGT00700000104550.a.j.b.d.a ENSGT00940000158764.g.a ENSGT00950000182863.A.a.b.g.b #21 ENSGT00950000183176.a.h.a #22 ENSGT00950000183131.a.f.m.b #23 ENSGT00940000157014.f.c #37 ENSGT01050000244866.D.b.a ENSGT00950000182978.A.a.b.b.d ENSGT00940000160402.b ENSGT00390000010923.d ENSGT00950000182848.c.b.a.b.e ENSGT00940000159376.d ENSGT01030000234565.a.b.b.b.b.c.b.a.a.a.a.b ENSGT00940000155154.b.t ENSGT00730000111020.b.b.c ENSGT00930000150941.xb ENSGT00510000047836.g.a ENSGT00390000016206.n ENSGT01100000263545.a.b.d.b.f Atlantic salmon MODERN SPECIES 3 ENSSSAG00000120805 ENSSSAG00000004706 ENSSSAG00000108144 slc2a10 (ENSSSAG00000004573) tp53rk (ENSSSAG00000004562) ENSSSAG00000004521 ENSSSAG00000004500 ENSSSAG00000004482 ENSSSAG00000004236 ENSSSAG00000082937 arfrp (ENSSSAG00000080960) ENSSSAG00000080768 ENSSSAG00000042204 ENSSSAG00000080632 tox2 (ENSSSAG00000080613) cbfa2t2 (ENSSSAG00000080585) #22 ENSSSAG00000080603 #21 ENSSSAG00000080577 #23 itcha (ENSSSAG00000080346) #37 ENSSSAG00000080309 ENSSSAG00000107656 eya2 (ENSSSAG00000080295) GCNT7 (ENSSSAG00000085321) rtf2 (ENSSSAG00000080288) tfap2c (ENSSSAG00000111370) ENSSSAG00000080257 ENSSSAG00000080227 ENSSSAG00000120035 ENSSSAG00000092360 ENSSSAG00000080167 pltp (ENSSSAG00000080151) River trout MODERN SPECIES 5 tcf15 (ENSSTUG00000050608) ENSSTUG00000050611 slc2a10 (ENSSTUG00000001199) tp53rk (ENSSTUG00000001473) ENSSTUG00000001696 ENSSTUG00000002036 ENSSTUG00000002048 ENSSTUG00000002050 ENSSTUG00000002123 STMN3 (ENSSTUG00000002361) arfrp1 (ENSSTUG00000002368) KCNQ2 (ENSSTUG00000002400) RALGAPB (ENSSTUG00000002634) tox2 (ENSSTUG00000002768) SNTA1 (ENSSTUG00000002850) #21 cbfa2t2 (ENSSTUG00000002905) #22 NECAB3 (ENSSTUG00000003768) #23 itcha (ENSSTUG00000004043) #37 tgm5l (ENSSTUG00000007433) eya2 (ENSSTUG00000007453) rtf2 (ENSSTUG00000007517) GCNT7 (ENSSTUG00000007539) tfap2c (ENSSTUG00000007554) CDH22 (ENSSTUG00000007594) ENSSTUG00000007677 ZNFX1 (ENSSTUG00000007683) ENSSTUG00000007940 ube2c (ENSSTUG00000007947) DNTTIP1 (ENSSTUG00000007962) pcif1 (ENSSTUG00000008009) pltp (ENSSTUG00000009033) Salmoninae ANCESTRAL SPECIES 130 ENSGT00390000012914.k.a ENSGT00940000163348 ENSGT01030000234623.a.a.a.a.a.e ENSGT00940000155094.a.c ENSGT00390000006008 ENSGT00940000158197.c.e ENSGT00940000160694.g.a ENSGT01030000234597.a.b.b.f.i.b ENSGT00940000166655.i ENSGT00940000156407.a ENSGT01100000263529.a.a.a.a.b.c.b.g.b ENSGT00940000160093.a.b ENSGT00700000104550.a.j.b.d.b ENSGT00940000158764.g.b ENSGT00950000182863.A.a.b.g.a #21 ENSGT00950000183176.a.h.b #22 ENSGT00950000183131.a.f.m.a #23 ENSGT00940000157014.f.d #37 ENSGT00390000001562 #27 ENSGT00950000182978.A.a.b.b.c ENSGT00390000010923.c ENSGT00940000160402.a ENSGT00950000182848.c.b.a.b.f ENSGT00940000159376.c ENSGT00940000155154.b.s ENSGT00550000074997 ENSGT01070000254033 ENSGT00940000155052 ENSGT00730000111020.b.b.d ENSGT00940000153725.a.a ENSGT00930000150941.wb Salmoninae_a ANCESTRAL SPECIES 78 ENSGT00940000160093.a.b ENSGT00700000104550.a.j.b.d.b ENSGT00940000158764.g.b ENSGT00950000182863.A.a.b.g.a #21 ENSGT00950000183176.a.h.b #22 ENSGT00950000183131.a.f.m.a #23 ENSGT00940000157014.f.d #37 ENSGT00390000001562 #27 ENSGT00950000182978.A.a.b.b.c ENSGT00390000010923.c ENSGT00940000160402.a ENSGT00950000182848.c.b.a.b.f ENSGT00940000159376.c ENSGT00940000155154.b.s ENSGT00550000074997 ENSGT00940000155052 ENSGT01070000254033 ENSGT00730000111020.b.b.d ENSGT00940000153725.a.a ENSGT00930000150941.wb Salmo ANCESTRAL SPECIES 61 ENSGT00940000160093.a.b ENSGT00700000104550.a.j.b.d.b ENSGT00940000158764.g.b ENSGT00950000182863.A.a.b.g.a #21 ENSGT00950000183176.a.h.b #22 ENSGT00950000183131.a.f.m.a #23 ENSGT00940000157014.f.d #37 ENSGT00390000001562 #27 ENSGT00630000089884.B.b.b ENSGT00950000182978.A.a.b.b.c ENSGT00940000160402.a ENSGT00390000010923.c ENSGT00950000182848.c.b.a.b.f ENSGT00940000159376.c ENSGT00940000155154.b.s ENSGT00550000074997 ENSGT00940000155052 ENSGT01070000254033 ENSGT00730000111020.b.b.d ENSGT00940000153725.a.a Atlantic salmon MODERN SPECIES 14 ENSSSAG00000072682 ENSSSAG00000103666 p2ry1 (ENSSSAG00000073317) ENSSSAG00000073320 ENSSSAG00000088866 ENSSSAG00000073332 ENSSSAG00000073361 ENSSSAG00000073370 arfrp1 (ENSSSAG00000121578) ENSSSAG00000073387 ENSSSAG00000073474 ENSSSAG00000074767 tox2 (ENSSSAG00000074925) ENSSSAG00000120643 SNTA1 (ENSSSAG00000090448) #21 cbfa2t2 (ENSSSAG00000074944) #22 necab3 (ENSSSAG00000008672) #23 itcha (ENSSSAG00000009092) #37 ENSSSAG00000099299 #27 ENSSSAG00000041408 ENSSSAG00000113884 eya2 (ENSSSAG00000041586) rtf2 (ENSSSAG00000042491) ENSSSAG00000042503 tfap2c (ENSSSAG00000042513) cdh22 (ENSSSAG00000042756) ENSSSAG00000043036 ddx27 (ENSSSAG00000043757) snrpb (ENSSSAG00000044713) ENSSSAG00000044773 ENSSSAG00000103787 River trout MODERN SPECIES 7 ENSSTUG00000031258 ENSSTUG00000031249 FNDC11 (ENSSTUG00000031239) stk35l (ENSSTUG00000031221) HELZ2 (ENSSTUG00000031078) STMN3 (ENSSTUG00000031072) ENSSTUG00000031061 arfrp1 (ENSSTUG00000031050) ENSSTUG00000031046 CHRNA4 (ENSSTUG00000031023) KCNQ2 (ENSSTUG00000030932) RALGAPB (ENSSTUG00000030603) ENSSTUG00000030589 tox2 (ENSSTUG00000030546) SNTA1 (ENSSTUG00000030542) #21 cbfa2t2 (ENSSTUG00000030417) #22 NECAB3 (ENSSTUG00000030399) #23 itcha (ENSSTUG00000026451) #37 pxmp4 (ENSSTUG00000026318) #27 RNF213 (ENSSTUG00000026277) eya2 (ENSSTUG00000026254) GCNT7 (ENSSTUG00000026244) rtf2 (ENSSTUG00000026219) tfap2c (ENSSTUG00000026157) ENSSTUG00000030299 ENSSTUG00000030292 ENSSTUG00000030283 CDH22 (ENSSTUG00000030249) ZNFX1 (ENSSTUG00000030106) ddx27 (ENSSTUG00000029757) ENSSTUG00000029721 Oncorhynchus ANCESTRAL SPECIES 72 ENSGT00940000160093.a.b ENSGT00700000104550.a.j.b.d.b ENSGT00940000158764.g.b ENSGT00950000182863.A.a.b.g.a #21 ENSGT00950000183176.a.h.b #22 ENSGT00950000183131.a.f.m.a #23 ENSGT00940000157014.f.d #37 ENSGT00390000001562 #27 ENSGT00630000089884.B.b.a.b ENSGT00950000182978.A.a.b.b.c ENSGT00390000010923.c ENSGT00940000160402.a ENSGT00950000182848.c.b.a.b.f ENSGT00940000159376.c ENSGT00940000155154.b.s ENSGT00550000074997 ENSGT00940000155052 ENSGT01070000254033 ENSGT00730000111020.b.b.d ENSGT00940000153725.a.a Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT00390000012914.k.a ENSGT00940000163348 ENSGT01030000234623.a.a.a.a.a.e ENSGT00940000155094.a.c ENSGT00390000006008 ENSGT00940000158197.c.e ENSGT00940000160694.g.a ENSGT01030000234597.a.b.b.f.i.b ENSGT00940000166655.i ENSGT00940000156407.a ENSGT01100000263529.a.a.a.a.b.c.b.g.b ENSGT00940000160093.a.b ENSGT00700000104550.a.j.b.d.b ENSGT00940000158764.g.b ENSGT00950000182863.A.a.b.g.a #21 ENSGT00950000183176.a.h.b #22 ENSGT00950000183131.a.f.m.a #23 ENSGT00940000157014.f.d #37 ENSGT00390000001562 #27 ENSGT00630000089884.B.b.a.b ENSGT00950000182978.A.a.b.b.c ENSGT00390000010923.c ENSGT00940000160402.a ENSGT00950000182848.c.b.a.b.f ENSGT00990000208694 ENSGT00940000159376.c ENSGT00940000155154.b.s ENSGT00550000074997 ENSGT00940000155052 ENSGT01070000254033 ENSGT00730000111020.b.b.d Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 31 HELZ2 (ENSOTSG00005015887) STMN3 (ENSOTSG00005015967) ENSOTSG00005015968 ENSOTSG00005015969 arfrp1 (ENSOTSG00005015970) ENSOTSG00005015972 CHRNA4 (ENSOTSG00005015974) KCNQ2 (ENSOTSG00005015978) polr3c (ENSOTSG00005015982) ENSOTSG00005015984 ENSOTSG00005015985 dap3 (ENSOTSG00005015992) tox2 (ENSOTSG00005016122) SNTA1 (ENSOTSG00005016124) #21 cbfa2t2 (ENSOTSG00005016127) #22 cbfa2t2 (ENSOTSG00005016129) #22 ENSOTSG00005016272 #23 itcha (ENSOTSG00005016301) #37 pxmp4 (ENSOTSG00005022785) #27 ENSOTSG00005022787 eya2 (ENSOTSG00005022789) ENSOTSG00005022796 rtf2 (ENSOTSG00005022798) GCNT7 (ENSOTSG00005022803) tfap2c (ENSOTSG00005022805) ENSOTSG00005022806 CDH22 (ENSOTSG00005022807) ENSOTSG00005022811 ZNFX1 (ENSOTSG00005022823) ddx27 (ENSOTSG00005022935) snrpb (ENSOTSG00005024089) Chinook salmon MODERN SPECIES 31 stk35l (ENSOTSG00005015886) HELZ2 (ENSOTSG00005015887) STMN3 (ENSOTSG00005015967) ENSOTSG00005015968 ENSOTSG00005015969 arfrp1 (ENSOTSG00005015970) ENSOTSG00005015972 CHRNA4 (ENSOTSG00005015974) KCNQ2 (ENSOTSG00005015978) polr3c (ENSOTSG00005015982) ENSOTSG00005015984 ENSOTSG00005015985 dap3 (ENSOTSG00005015992) tox2 (ENSOTSG00005016122) SNTA1 (ENSOTSG00005016124) #21 cbfa2t2 (ENSOTSG00005016127) #22 cbfa2t2 (ENSOTSG00005016129) #22 ENSOTSG00005016272 #23 itcha (ENSOTSG00005016301) #37 pxmp4 (ENSOTSG00005022785) #27 ENSOTSG00005022787 eya2 (ENSOTSG00005022789) ENSOTSG00005022796 rtf2 (ENSOTSG00005022798) GCNT7 (ENSOTSG00005022803) tfap2c (ENSOTSG00005022805) ENSOTSG00005022806 CDH22 (ENSOTSG00005022807) ENSOTSG00005022811 ZNFX1 (ENSOTSG00005022823) ddx27 (ENSOTSG00005022935) Coho salmon MODERN SPECIES 25 ENSOKIG00005043832 ENSOKIG00005043940 FNDC11 (ENSOKIG00005043948) stk35l (ENSOKIG00005043963) HELZ2 (ENSOKIG00005043991) STMN3 (ENSOKIG00005044143) ENSOKIG00005044181 arfrp1 (ENSOKIG00005044265) ENSOKIG00005044303 CHRNA4 (ENSOKIG00005044316) KCNQ2 (ENSOKIG00005044400) RALGAPB (ENSOKIG00005044618) tox2 (ENSOKIG00005044848) ENSOKIG00005044883 #21 ENSOKIG00005044917 cbfa2t2 (ENSOKIG00005044929) #22 ENSOKIG00005044979 #23 itcha (ENSOKIG00005045129) #37 pxmp4 (ENSOKIG00005047049) #27 ENSOKIG00005047063 eya2 (ENSOKIG00005047080) ENSOKIG00005047117 rtf2 (ENSOKIG00005047123) GCNT7 (ENSOKIG00005047128) tfap2c (ENSOKIG00005047140) ENSOKIG00005047154 ENSOKIG00005000057 CDH22 (ENSOKIG00005000135) ENSOKIG00005000165 ZNFX1 (ENSOKIG00005000227) ddx27 (ENSOKIG00005000333) Rainbow trout MODERN SPECIES 28 ENSOMYG00000014483 ENSOMYG00000067948 ENSOMYG00000014493 ENSOMYG00000014500 ENSOMYG00000014521 ENSOMYG00000014634 ENSOMYG00000014651 arfrp1 (ENSOMYG00000014719) ENSOMYG00000063827 ENSOMYG00000014736 ENSOMYG00000014804 ENSOMYG00000015095 ENSOMYG00000015288 tox2 (ENSOMYG00000015425) SNTA1 (ENSOMYG00000015456) #21 cbfa2t2 (ENSOMYG00000015470) #22 NECAB3 (ENSOMYG00000015492) #23 ENSOMYG00000065591 itcha (ENSOMYG00000015916) #37 ENSOMYG00000060314 ENSOMYG00000022538 #27 ENSOMYG00000022556 ENSOMYG00000029729 eya2 (ENSOMYG00000022568) ENSOMYG00000069743 rtf2 (ENSOMYG00000022594) ENSOMYG00000022609 tfap2c (ENSOMYG00000022641) ENSOMYG00000022664 ENSOMYG00000022689 ENSOMYG00000072292 Huchen MODERN SPECIES 4544 cbfa2t2 (ENSHHUG00000039107) #22 ENSHHUG00000039137 ##23