Glires	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.a	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT01010000223591
Rodentia	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT01010000223591
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174.f	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT01010000223591
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174.f	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084.u ##34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT01010000223591
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000050821 #7	FAT3 (ENSHGLG00000010388) #8	ENSHGLG00000044735 #9	SLC36A4 (ENSHGLG00000044885) #10	ENSHGLG00000020910 #11	ENSHGLG00000014481 #12	C11orf54 (ENSHGLG00000012597) #13	TAF1D (ENSHGLG00000008795) #14	MED17 (ENSHGLG00000006191) #15	VSTM5 (ENSHGLG00000007424) #16	ENSHGLG00000048701 #17	ENSHGLG00000049421 #18	HEPHL1 (ENSHGLG00000005416) #19	PANX1 (ENSHGLG00000007682) #20	ENSHGLG00000050118 #21	IZUMO1R (ENSHGLG00000008985) #22	ENSHGLG00000019637 #23	GPR83 (ENSHGLG00000018711) #24	MRE11A (ENSHGLG00000015754) #25	ANKRD49 (ENSHGLG00000014039) #26	ENSHGLG00000014136 #27	FUT4 (ENSHGLG00000005608) #28	ENSHGLG00000005671 #29	PIWIL4 (ENSHGLG00000007416) #30	ENSHGLG00000008729 #31	AMOTL1 (ENSHGLG00000010959) #32	ENSHGLG00000049265 #33	ENSHGLG00000035638 #34	ENSHGLG00000032452 #35	ENSHGLG00000043269 #36	ENSHGLG00000046281 #37
Hystricomorpha_a	ANCESTRAL SPECIES	10	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174.f	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084.u ##34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Hystricomorpha_b	ANCESTRAL SPECIES	5	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174.f	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26
Long-tailed chinchilla	MODERN SPECIES	121	NAALAD2 (ENSCLAG00000012474)	ENSCLAG00000014963	FAT3 (ENSCLAG00000013669) #8	ENSCLAG00000012677	MTNR1B (ENSCLAG00000012055) #9	SLC36A4 (ENSCLAG00000015872) #10	DEUP1 (ENSCLAG00000013832)	SMCO4 (ENSCLAG00000011932) #37	CEP295 (ENSCLAG00000014683) #12	TAF1D (ENSCLAG00000014698) #14	C11orf54 (ENSCLAG00000017272) #13	MED17 (ENSCLAG00000017202) #15	VSTM5 (ENSCLAG00000016423) #16	HEPHL1 (ENSCLAG00000015721) #19	PANX1 (ENSCLAG00000014612) #20	IZUMO1R (ENSCLAG00000015110) #22	ENSCLAG00000013252	GPR83 (ENSCLAG00000013629) #24	ENSCLAG00000013392 #25	ANKRD49 (ENSCLAG00000015054) #26
Degu	MODERN SPECIES	250	ENSODEG00000018835	ENSODEG00000002534	FAT3 (ENSODEG00000002606) #8	MTNR1B (ENSODEG00000002125) #9	SLC36A4 (ENSODEG00000002145) #10	DEUP1 (ENSODEG00000002198)	SMCO4 (ENSODEG00000018804) #37	TAF1D (ENSODEG00000002225) #14	C11orf54 (ENSODEG00000002265) #13	MED17 (ENSODEG00000002353) #15	VSTM5 (ENSODEG00000002406) #16	ENSODEG00000002422	HEPHL1 (ENSODEG00000002492) #19	ENSODEG00000000644 #20	ENSODEG00000000623	IZUMO1R (ENSODEG00000000695) #22	GPR83 (ENSODEG00000000724) #24	ENSODEG00000001221 #26	ENSODEG00000001233
Guinea pig	MODERN SPECIES	40	FOLH1 (ENSCPOG00000003797)	NAALAD2 (ENSCPOG00000038440)	CHORDC1 (ENSCPOG00000022614)	ENSCPOG00000010626 #8	MTNR1B (ENSCPOG00000010637) #9	SLC36A4 (ENSCPOG00000036098) #10	DEUP1 (ENSCPOG00000011016)	SMCO4 (ENSCPOG00000032286) #37	CEP295 (ENSCPOG00000032006) #12	TAF1D (ENSCPOG00000002426) #14	C11orf54 (ENSCPOG00000014146) #13	MED17 (ENSCPOG00000014149) #15	VSTM5 (ENSCPOG00000024881) #16	HEPHL1 (ENSCPOG00000004098) #19	PANX1 (ENSCPOG00000039148) #20	IZUMO1R (ENSCPOG00000011657) #22	GPR83 (ENSCPOG00000039200) #24	MRE11 (ENSCPOG00000014563) #25	ANKRD49 (ENSCPOG00000030391) #26	C11orf97 (ENSCPOG00000031459) #27	FUT4 (ENSCPOG00000000069) #28	PIWIL4 (ENSCPOG00000000070) #30	AMOTL1 (ENSCPOG00000006241) #32	CWC15 (ENSCPOG00000006249) ##34	KDM4D (ENSCPOG00000006256) #23
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000163419	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174.f	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152.g.a #23	ENSGT00940000162152.g.b #23	ENSGT00940000162152.h #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a
Marmotini	ANCESTRAL SPECIES	20	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174.f	ENSGT00940000178162	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152.g.a #23	ENSGT00940000162152.g.b #23	ENSGT00940000162152.h #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a
Alpin marmot	MODERN SPECIES	25	CHORDC1 (ENSMMMG00000004692)	ENSMMMG00000004674	ENSMMMG00000004671	FAT3 (ENSMMMG00000004600) #8	MTNR1B (ENSMMMG00000004580) #9	SLC36A4 (ENSMMMG00000004555) #10	DEUP1 (ENSMMMG00000004469)	SMCO4 (ENSMMMG00000004447) #37	CEP295 (ENSMMMG00000004214) #12	TAF1D (ENSMMMG00000004115) #14	C11orf54 (ENSMMMG00000004067) #13	MED17 (ENSMMMG00000004045) #15	VSTM5 (ENSMMMG00000004034) #16	HEPHL1 (ENSMMMG00000003995) #19	PANX1 (ENSMMMG00000003980) #20	IZUMO1R (ENSMMMG00000003960) #22	GPR83 (ENSMMMG00000003939) #24	MRE11 (ENSMMMG00000003822) #25	ANKRD49 (ENSMMMG00000003801) #26	C11orf97 (ENSMMMG00000003791) #27	FUT4 (ENSMMMG00000003775) #28	PIWIL4 (ENSMMMG00000003741) #30	AMOTL1 (ENSMMMG00000003717) #32	CWC15 (ENSMMMG00000003695) #34	ENSMMMG00000003692 #23	ENSMMMG00000003680 #23	ENSMMMG00000003674 #23	ENSMMMG00000003662 #23	ENDOD1 (ENSMMMG00000003657) #36	SESN3 (ENSMMMG00000003584)	ENSMMMG00000003554
Marmotini_b	ANCESTRAL SPECIES	155			ENSGT00940000178162	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152.g.a #23	ENSGT00940000162152.g.b #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a
Squirrel	MODERN SPECIES	274		FAT3 (ENSSTOG00000008783) #8	MTNR1B (ENSSTOG00000008849) #9	SLC36A4 (ENSSTOG00000008854) #10	DEUP1 (ENSSTOG00000011722)	SMCO4 (ENSSTOG00000008008) #37	CEP295 (ENSSTOG00000008015) #12	TAF1D (ENSSTOG00000030516) #14	C11orf54 (ENSSTOG00000008061) #13	MED17 (ENSSTOG00000008098) #15	VSTM5 (ENSSTOG00000025751) #16	ENSSTOG00000033997	HEPHL1 (ENSSTOG00000026323) #19	PANX1 (ENSSTOG00000006851) #20	ENSSTOG00000032468	IZUMO1R (ENSSTOG00000032389) #22	GPR83 (ENSSTOG00000006859) #24	MRE11 (ENSSTOG00000006869) #25	ANKRD49 (ENSSTOG00000028263) #26	C11orf97 (ENSSTOG00000032509) #27	FUT4 (ENSSTOG00000006910) #28	ENSSTOG00000006932 #30	AMOTL1 (ENSSTOG00000002462) #32	CWC15 (ENSSTOG00000002485) #34	KDM4D (ENSSTOG00000021726) #23
Arctic ground squirrel	MODERN SPECIES	166			ENSUPAG00010000873	FAT3 (ENSUPAG00010000879) #8	MTNR1B (ENSUPAG00010000937) #9	SLC36A4 (ENSUPAG00010000949) #10	DEUP1 (ENSUPAG00010000984)	CEP295 (ENSUPAG00010001137) #12	TAF1D (ENSUPAG00010001478) #14	C11orf54 (ENSUPAG00010001486) #13	MED17 (ENSUPAG00010001622) #15	VSTM5 (ENSUPAG00010001672) #16	HEPHL1 (ENSUPAG00010001691) #19	PANX1 (ENSUPAG00010001730) #20	ENSUPAG00010001744	IZUMO1R (ENSUPAG00010001756) #22	GPR83 (ENSUPAG00010001763) #24	MRE11 (ENSUPAG00010001790) #25	ANKRD49 (ENSUPAG00010001896) #26	C11orf97 (ENSUPAG00010001935) #27	FUT4 (ENSUPAG00010001953) #28	PIWIL4 (ENSUPAG00010001982) #30	AMOTL1 (ENSUPAG00010002044) #32	CWC15 (ENSUPAG00010002076) #34	KDM4D (ENSUPAG00010002086) #23	ENDOD1 (ENSUPAG00010002099) #36	SESN3 (ENSUPAG00010002105)	ENSUPAG00010002123	ENSUPAG00010002131
Eurasian red squirrel	MODERN SPECIES	2	NAALAD2 (ENSSVLG00005023397)	ENSSVLG00005023505	FAT3 (ENSSVLG00005023682) #8	MTNR1B (ENSSVLG00005023956) #9	SLC36A4 (ENSSVLG00005023972) #10	ENSSVLG00005024017	DEUP1 (ENSSVLG00005024034)	SMCO4 (ENSSVLG00005024149) #37	CEP295 (ENSSVLG00005024179) #12	TAF1D (ENSSVLG00005008868) #14	C11orf54 (ENSSVLG00005008945) #13	MED17 (ENSSVLG00005009035) #15	VSTM5 (ENSSVLG00005009102) #16	HEPHL1 (ENSSVLG00005009168) #19	PANX1 (ENSSVLG00005009275) #20	IZUMO1R (ENSSVLG00005009300) #22	GPR83 (ENSSVLG00005009337) #24	MRE11 (ENSSVLG00005009395) #25	ENSSVLG00005009454	ANKRD49 (ENSSVLG00005009488) #26	C11orf97 (ENSSVLG00005009503) #27	FUT4 (ENSSVLG00005009540) #28	PIWIL4 (ENSSVLG00005009583) #30	AMOTL1 (ENSSVLG00005009738) #32	CWC15 (ENSSVLG00005009802) #34	KDM4D (ENSSVLG00005009838) #23	ENSSVLG00005009855 #23	ENDOD1 (ENSSVLG00005009881) #36	SESN3 (ENSSVLG00005009932)	ENSSVLG00005010116	CEP57 (ENSSVLG00005010241)
Rodentia_B	ANCESTRAL SPECIES	23	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Myomorpha	ANCESTRAL SPECIES	23	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Muroidea	ANCESTRAL SPECIES	29	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Muroidea_A	ANCESTRAL SPECIES	23	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00950000183005.b.c.b	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214.m #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Cricetinae	ANCESTRAL SPECIES	45		ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214.m #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Chinese hamster chok1gshd	MODERN SPECIES	310	Chordc1 (ENSCGRG00001004673)	ENSCGRG00001007587	Fat3 (ENSCGRG00001016740) #8	Mtnr1b (ENSCGRG00001017947) #9	Slc36a4 (ENSCGRG00001005789) #10	Deup1 (ENSCGRG00001012085)	Smco4 (ENSCGRG00001013247) #37	ENSCGRG00001018019	Cep295 (ENSCGRG00001000538) #12	Taf1d (ENSCGRG00001004962) #14	4931406C07Rik (ENSCGRG00001008949) #13	MED17 (ENSCGRG00001017473) #15	Vstm5 (ENSCGRG00001006156) #16	Hephl1 (ENSCGRG00001014172) #19	PANX (ENSCGRG00001016361) #20	Izumo1r (ENSCGRG00001016589) #22	Gpr83 (ENSCGRG00001018677) #24	Mre11a (ENSCGRG00001006581) #25	Ankrd49 (ENSCGRG00001014107) #26	1700012B09Rik (ENSCGRG00001015499) #27	Fut4 (ENSCGRG00001013612) #28	Piwil4 (ENSCGRG00001017873) #30	Amotl1 (ENSCGRG00001011579) #32	Cwc15 (ENSCGRG00001013337) #34	Kdm4d (ENSCGRG00001013157) #23
Golden Hamster	MODERN SPECIES	778			Naalad2 (ENSMAUG00000008805)	Chordc1 (ENSMAUG00000012157)	Fat3 (ENSMAUG00000007614) #8	Slc36a4 (ENSMAUG00000001281) #10	Deup1 (ENSMAUG00000001957)	Smco4 (ENSMAUG00000000425) #37	Taf1d (ENSMAUG00000002515) #14	4931406C07Rik (ENSMAUG00000000356) #13	Med17 (ENSMAUG00000000493) #15	Vstm5 (ENSMAUG00000000333) #16	Hephl1 (ENSMAUG00000017278) #19	ENSMAUG00000015499 #20	ENSMAUG00000015032	Izumo1r (ENSMAUG00000018564) #22	Gpr83 (ENSMAUG00000017943) #24	ENSMAUG00000016290 #25	Ankrd49 (ENSMAUG00000014988) #26	1700012B09Rik (ENSMAUG00000014010) #27	ENSMAUG00000015824	Fut4 (ENSMAUG00000015849) #28	Piwil4 (ENSMAUG00000011382) #30	Amotl1 (ENSMAUG00000012162) #32	Cwc15 (ENSMAUG00000011686) #34	Kdm4d (ENSMAUG00000010975) #23	Endod1 (ENSMAUG00000010649) #36	Sesn3 (ENSMAUG00000009718)
Cricetidae_B	ANCESTRAL SPECIES	61	ENSGT00950000183005.b.c.b	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214.m #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152 #23
Northern American deer mouse	MODERN SPECIES	20	Chordc1 (ENSPEMG00000030600)	ENSPEMG00000031155	Fat3 (ENSPEMG00000013197) #8	Mtnr1b (ENSPEMG00000000316) #9	Slc36a4 (ENSPEMG00000023886) #10	Deup1 (ENSPEMG00000016493)	Smco4 (ENSPEMG00000027427) #37	Cep295 (ENSPEMG00000023772) #12	Taf1d (ENSPEMG00000023691) #14	4931406C07Rik (ENSPEMG00000023421) #13	Med17 (ENSPEMG00000024047) #15	Vstm5 (ENSPEMG00000028348) #16	ENSPEMG00000002357	Hephl1 (ENSPEMG00000021631) #19	Panx1 (ENSPEMG00000010979) #20	Izumo1r (ENSPEMG00000021678) #22	Gpr83 (ENSPEMG00000022377) #24	ENSPEMG00000030623	Mre11a (ENSPEMG00000023250) #25	1700012B09Rik (ENSPEMG00000012698) #27	ENSPEMG00000025171 #28	Piwil4 (ENSPEMG00000023859) #30	Amotl1 (ENSPEMG00000021905) #32	Cwc15 (ENSPEMG00000021432) #34	Kdm4d (ENSPEMG00000001845) #23	Alkbh8 (ENSPEMG00000022020)	Cwf19l2 (ENSPEMG00000022399) #29	Gucy1a2 (ENSPEMG00000021986)	ENSPEMG00000025699	Aasdhppt (ENSPEMG00000016551)	Kbtbd3 (ENSPEMG00000029070)
Prairie vole	MODERN SPECIES	204												Hephl1 (ENSMOCG00000002936) #19	ENSMOCG00000018402 #20	ENSMOCG00000012579	ENSMOCG00000010783	Izumo1r (ENSMOCG00000012181) #22	Gpr83 (ENSMOCG00000008157) #24	ENSMOCG00000011442 #25	Ankrd49 (ENSMOCG00000000210) #26	1700012B09Rik (ENSMOCG00000020476) #27	Fut4 (ENSMOCG00000012642) #28	Piwil4 (ENSMOCG00000020261) #30	Amotl1 (ENSMOCG00000014408) #32	Cwc15 (ENSMOCG00000016094) #34	Kdm4d (ENSMOCG00000008583) #23
Murinae	ANCESTRAL SPECIES	3	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Mus	ANCESTRAL SPECIES	4	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Mouse	MODERN SPECIES	18	Ubtfl1 (ENSMUSG00000074502)	Naalad2 (ENSMUSG00000043943)	Chordc1 (ENSMUSG00000001774)	Fat3 (ENSMUSG00000074505) #8	Mtnr1b (ENSMUSG00000050901) #9	Slc36a4 (ENSMUSG00000043885) #10	Deup1 (ENSMUSG00000039977)	Smco4 (ENSMUSG00000058173) #37	Cep295 (ENSMUSG00000046111) #12	Taf1d (ENSMUSG00000031939) #14	4931406C07Rik (ENSMUSG00000031938) #13	Med17 (ENSMUSG00000031935) #15	Vstm5 (ENSMUSG00000031937) #16	Hephl1 (ENSMUSG00000031936) #19	Panx1 (ENSMUSG00000031934) #20	Izumo1r (ENSMUSG00000031933) #22	Gpr83 (ENSMUSG00000031932) #24	Mre11a (ENSMUSG00000031928) #25	Ankrd49 (ENSMUSG00000031931) #26	1700012B09Rik (ENSMUSG00000031927) #27	Fut4 (ENSMUSG00000049307) #28	Piwil4 (ENSMUSG00000036912) #30	Amotl1 (ENSMUSG00000013076) #32	Cwc15 (ENSMUSG00000004096) #34	Kdm4d (ENSMUSG00000053914) #23	Endod1 (ENSMUSG00000037419) #36	Sesn3 (ENSMUSG00000032009)	Fam76b (ENSMUSG00000037808)	Cep57 (ENSMUSG00000031922)	Mtmr2 (ENSMUSG00000031918)	Gm17571 (ENSMUSG00000090592)
Mus_C	ANCESTRAL SPECIES	8	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174	ENSGT00940000153052.c.b.b.b.d.a.a	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
spretus	MODERN SPECIES	18	Ubtfl1 (MGP_SPRETEiJ_G0032925)	Naalad2 (MGP_SPRETEiJ_G0032924)	Chordc1 (MGP_SPRETEiJ_G0032923)	MGP_SPRETEiJ_G0032922	Fat3 (MGP_SPRETEiJ_G0032921) #8	MGP_SPRETEiJ_G0032920 #9	Slc36a4 (MGP_SPRETEiJ_G0032919) #10	Deup1 (MGP_SPRETEiJ_G0032918)	Smco4 (MGP_SPRETEiJ_G0032917) #37	Cep295 (MGP_SPRETEiJ_G0032916) #12	4931406C07Rik (MGP_SPRETEiJ_G0032915) #13	Med17 (MGP_SPRETEiJ_G0032914) #15	Vstm5 (MGP_SPRETEiJ_G0032913) #16	Hephl1 (MGP_SPRETEiJ_G0032912) #19	Panx1 (MGP_SPRETEiJ_G0032911) #20	Izumo1r (MGP_SPRETEiJ_G0032910) #22	MGP_SPRETEiJ_G0032909 #24	Mre11a (MGP_SPRETEiJ_G0032908) #25	Ankrd49 (MGP_SPRETEiJ_G0032907) #26	1700012B09Rik (MGP_SPRETEiJ_G0032906) #27	Fut4 (MGP_SPRETEiJ_G0032905) #28	Piwil4 (MGP_SPRETEiJ_G0032904) #30	Amotl1 (MGP_SPRETEiJ_G0032903) #32	Cwc15 (MGP_SPRETEiJ_G0032902) #34	Kdm4d (MGP_SPRETEiJ_G0032901) #23	Endod1 (MGP_SPRETEiJ_G0032900) #36	Sesn3 (MGP_SPRETEiJ_G0032899)	Fam76b (MGP_SPRETEiJ_G0032898)	Cep57 (MGP_SPRETEiJ_G0032897)	Mtmr2 (MGP_SPRETEiJ_G0032896)	Maml2 (MGP_SPRETEiJ_G0032895)
Steppe mouse	MODERN SPECIES	3318	ENSMSIG00000015167	ENSMSIG00000015180	ENSMSIG00000015183	Fat3 (ENSMSIG00000015207) #8	Mtnr1b (ENSMSIG00000015621) #9	Slc36a4 (ENSMSIG00000015623) #10	Deup1 (ENSMSIG00000015751)	ENSMSIG00000015880 #37	Cep295 (ENSMSIG00000015917) #12	Taf1d (ENSMSIG00000016165) #14	4931406C07Rik (ENSMSIG00000016204) #13	Med17 (ENSMSIG00000016253) #15	Vstm5 (ENSMSIG00000016281) #16	Hephl1 (ENSMSIG00000016306) #19	Panx1 (ENSMSIG00000016343) #20	Izumo1r (ENSMSIG00000016359) #22	Gpr83 (ENSMSIG00000016567) #24	ENSMSIG00000016588	Mre11a (ENSMSIG00000016606) #25	Ankrd49 (ENSMSIG00000016701) #26	1700012B09Rik (ENSMSIG00000016716) #27	Fut4 (ENSMSIG00000016738) #28	Piwil4 (ENSMSIG00000016745) #30	Amotl1 (ENSMSIG00000016862) #32	Cwc15 (ENSMSIG00000017024) #34	ENSMSIG00000017048 #23	Sesn3 (ENSMSIG00000017068)
Ryukyu mouse	MODERN SPECIES	18	Ubtfl1 (MGP_CAROLIEiJ_G0031805)	Naalad2 (MGP_CAROLIEiJ_G0031804)	Chordc1 (MGP_CAROLIEiJ_G0031803)	Fat3 (MGP_CAROLIEiJ_G0031802) #8	Mtnr1b (MGP_CAROLIEiJ_G0031801) #9	Slc36a4 (MGP_CAROLIEiJ_G0031800) #10	Deup1 (MGP_CAROLIEiJ_G0031799)	Smco4 (MGP_CAROLIEiJ_G0031798) #37	Cep295 (MGP_CAROLIEiJ_G0031797) #12	Taf1d (MGP_CAROLIEiJ_G0031796) #14	4931406C07Rik (MGP_CAROLIEiJ_G0031795) #13	Med17 (MGP_CAROLIEiJ_G0031794) #15	Vstm5 (MGP_CAROLIEiJ_G0031793) #16	Hephl1 (MGP_CAROLIEiJ_G0031792) #19	Panx1 (MGP_CAROLIEiJ_G0031791) #20	Izumo1r (MGP_CAROLIEiJ_G0031790) #22	Gpr83 (MGP_CAROLIEiJ_G0031789) #24	Mre11a (MGP_CAROLIEiJ_G0031788) #25	Ankrd49 (MGP_CAROLIEiJ_G0031787) #26	1700012B09Rik (MGP_CAROLIEiJ_G0031786) #27	Fut4 (MGP_CAROLIEiJ_G0031785) #28	Piwil4 (MGP_CAROLIEiJ_G0031784) #30	Amotl1 (MGP_CAROLIEiJ_G0031783) #32	Cwc15 (MGP_CAROLIEiJ_G0031782) #34	Kdm4d (MGP_CAROLIEiJ_G0031781) #23	Endod1 (MGP_CAROLIEiJ_G0031780) #36	Sesn3 (MGP_CAROLIEiJ_G0031779)	Fam76b (MGP_CAROLIEiJ_G0031778)	Cep57 (MGP_CAROLIEiJ_G0031777)	Mtmr2 (MGP_CAROLIEiJ_G0031776)	Maml2 (MGP_CAROLIEiJ_G0031775)
Shrew mouse	MODERN SPECIES	1	Ubtfl1 (MGP_PahariEiJ_G0014681)	MGP_PahariEiJ_G0014680	Chordc1 (MGP_PahariEiJ_G0014679)	Fat3 (MGP_PahariEiJ_G0014678) #8	Mtnr1b (MGP_PahariEiJ_G0014677) #9	Slc36a4 (MGP_PahariEiJ_G0014676) #10	Deup1 (MGP_PahariEiJ_G0014675)	Smco4 (MGP_PahariEiJ_G0014674) #37	Cep295 (MGP_PahariEiJ_G0014673) #12	MGP_PahariEiJ_G0014672 #14	4931406C07Rik (MGP_PahariEiJ_G0014671) #13	Med17 (MGP_PahariEiJ_G0014670) #15	Vstm5 (MGP_PahariEiJ_G0014669) #16	MGP_PahariEiJ_G0014668 #19	Panx1 (MGP_PahariEiJ_G0014667) #20	Izumo1r (MGP_PahariEiJ_G0014666) #22	Gpr83 (MGP_PahariEiJ_G0014665) #24	Mre11a (MGP_PahariEiJ_G0014664) #25	Ankrd49 (MGP_PahariEiJ_G0014663) #26	1700012B09Rik (MGP_PahariEiJ_G0014662) #27	Fut4 (MGP_PahariEiJ_G0014661) #28	Piwil4 (MGP_PahariEiJ_G0014660) #30	Amotl1 (MGP_PahariEiJ_G0014659) #32	Cwc15 (MGP_PahariEiJ_G0014658) #34	Kdm4d (MGP_PahariEiJ_G0014657) #23	Endod1 (MGP_PahariEiJ_G0014656) #36	Sesn3 (MGP_PahariEiJ_G0014655)	Fam76b (MGP_PahariEiJ_G0014654)	Cep57 (MGP_PahariEiJ_G0014653)	Mtmr2 (MGP_PahariEiJ_G0014652)	Maml2 (MGP_PahariEiJ_G0014651)
Rat	MODERN SPECIES	18	Nek2l1 (ENSRNOG00000012119)	LOC689840 (ENSRNOG00000031522)	Fat3 (ENSRNOG00000011585) #8	Mtnr1b (ENSRNOG00000008972) #9	Slc36a4 (ENSRNOG00000011455) #10	Deup1 (ENSRNOG00000061247)	Smco4 (ENSRNOG00000011162) #37	Cep295 (ENSRNOG00000010999) #12	Taf1d (ENSRNOG00000010921) #14	C8h11orf54 (ENSRNOG00000010887) #13	Med17 (ENSRNOG00000010496) #15	Vstm5 (ENSRNOG00000010480) #16	ENSRNOG00000062992	Hephl1 (ENSRNOG00000056092) #19	Panx1 (ENSRNOG00000010060) #20	Izumo1r (ENSRNOG00000019894) #22	Gpr83 (ENSRNOG00000030318) #24	Mre11 (ENSRNOG00000009506) #25	Ankrd49 (ENSRNOG00000009233) #26	C8h11orf97 (ENSRNOG00000009203) #27	Fut4 (ENSRNOG00000009157) #28	Piwil4 (ENSRNOG00000009043) #30	Amotl1 (ENSRNOG00000008990) #32	Cwc15 (ENSRNOG00000008490) #34	LOC108348070 (ENSRNOG00000045905) #23	Endod1 (ENSRNOG00000024757) #36	Sesn3 (ENSRNOG00000008173)	Fam76b (ENSRNOG00000024863)	Cep57 (ENSRNOG00000006792)	Mtmr2 (ENSRNOG00000005923)	Maml2 (ENSRNOG00000005879)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1827							Deup1 (ENSNGAG00000015010)	Smco4 (ENSNGAG00000019710) #37	Cep295 (ENSNGAG00000020811) #12	4931406C07Rik (ENSNGAG00000019210) #13	Med17 (ENSNGAG00000005765) #15	Vstm5 (ENSNGAG00000008846) #16	Hephl1 (ENSNGAG00000012499) #19	ENSNGAG00000004656	Panx1 (ENSNGAG00000014760) #20	Izumo1r (ENSNGAG00000009610) #22	Gpr83 (ENSNGAG00000015036) #24	Mre11a (ENSNGAG00000010330) #25	Ankrd49 (ENSNGAG00000012789) #26	1700012B09Rik (ENSNGAG00000013078) #27	Piwil4 (ENSNGAG00000022297) #30	Amotl1 (ENSNGAG00000012913) #32	Cwc15 (ENSNGAG00000016450) #34	Kdm4d (ENSNGAG00000019223) #23	Endod1 (ENSNGAG00000019861) #36	Sesn3 (ENSNGAG00000007814)
Lesser Egyptian jerboa	MODERN SPECIES	87	Cyfip1 (ENSJJAG00000018373)	Tubgcp5 (ENSJJAG00000018158)	Naalad2 (ENSJJAG00000016701)	Chordc1 (ENSJJAG00000015757)	ENSJJAG00000011242	ENSJJAG00000010000	ENSJJAG00000000974	ENSJJAG00000024255	Fat3 (ENSJJAG00000018504) #8	Deup1 (ENSJJAG00000000219)	Smco4 (ENSJJAG00000000940) #37	Cep295 (ENSJJAG00000001043) #12	Vstm5 (ENSJJAG00000019443) #16	Hephl1 (ENSJJAG00000015710) #19	Panx1 (ENSJJAG00000024378) #20	Izumo1r (ENSJJAG00000018637) #22	Mre11a (ENSJJAG00000009794) #25	Ankrd49 (ENSJJAG00000023374) #26	1700012B09Rik (ENSJJAG00000020782) #27	Fut4 (ENSJJAG00000015747) #28	ENSJJAG00000002783	Amotl1 (ENSJJAG00000000834) #32	ENSJJAG00000016968 #34	ENSJJAG00000015656 #23	Sesn3 (ENSJJAG00000019262)	Fam76b (ENSJJAG00000017450)	Cep57 (ENSJJAG00000013938)	Mtmr2 (ENSJJAG00000009913)	ENSJJAG00000002824	Ccdc82 (ENSJJAG00000017966)	Jrkl (ENSJJAG00000000663)
Kangaroo rat	MODERN SPECIES	433					Fat3 (ENSDORG00000024314) #8	Mtnr1b (ENSDORG00000026210) #9	ENSDORG00000002749	Slc36a4 (ENSDORG00000027198) #10	Deup1 (ENSDORG00000011685)	Smco4 (ENSDORG00000001107) #37	4931406C07Rik (ENSDORG00000005004) #13	Med17 (ENSDORG00000005005) #15	Vstm5 (ENSDORG00000004620) #16	Hephl1 (ENSDORG00000005176) #19	ENSDORG00000028004	Izumo1r (ENSDORG00000005007) #22	Gpr83 (ENSDORG00000004374) #24	ENSDORG00000004828 #25	Iws1 (ENSDORG00000007385)	Myo7b (ENSDORG00000015044)	Gpr17 (ENSDORG00000015052)	Lims2 (ENSDORG00000015051)	Wdr33 (ENSDORG00000023513)	Polr2d (ENSDORG00000026897)	Ammecr1l (ENSDORG00000028104)	Sap130 (ENSDORG00000015563)	Uggt1 (ENSDORG00000003315)	Hs6st1 (ENSDORG00000028206)	ENSDORG00000026180	ENSDORG00000026195	Fam168b (ENSDORG00000015352)
Lagomorpha	ANCESTRAL SPECIES	5	ENSGT01030000234598.b.a.b.k.a	ENSGT01030000234598.b.a.b.k.b	ENSGT00940000154174	ENSGT00940000154981 #8	ENSGT00940000162341 #9	ENSGT00940000160117 #10	ENSGT00940000153190.B.a	ENSGT00390000015987 #37	ENSGT00940000153123.A.e #12	ENSGT00390000009061 #14	ENSGT00390000017214 #13	ENSGT00390000011810 #15	ENSGT01100000263551.b.a.b #16	ENSGT00940000157994 #19	ENSGT00940000153972.A #20	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #24	ENSGT00390000017288 #25	ENSGT00390000003919 #26	ENSGT00520000058823 #27	ENSGT00940000162506 #28	ENSGT00950000183200.A.a.a #30	ENSGT00940000160158 #32	ENSGT00390000012084 #34	ENSGT00940000162152 #23	ENSGT01030000234592.B #36	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Rabbit	MODERN SPECIES		NAALAD2 (ENSOCUG00000014137)	ENSOCUG00000014147	ENSOCUG00000023399	FAT3 (ENSOCUG00000007427) #8	MTNR1B (ENSOCUG00000008196) #9	SLC36A4 (ENSOCUG00000000649) #10	DEUP1 (ENSOCUG00000000199)	CEP295 (ENSOCUG00000029678) #12	ENSOCUG00000001096 #14	C11orf54 (ENSOCUG00000012810) #13	MED17 (ENSOCUG00000012818) #15	VSTM5 (ENSOCUG00000026554) #16	ENSOCUG00000029520	HEPHL1 (ENSOCUG00000009466) #19	PANX1 (ENSOCUG00000009473) #20	IZUMO1R (ENSOCUG00000013431) #22	GPR83 (ENSOCUG00000015502) #24	MRE11 (ENSOCUG00000014899) #25	ANKRD49 (ENSOCUG00000014912) #26	ENSOCUG00000033194	C11orf97 (ENSOCUG00000034472) #27	FUT4 (ENSOCUG00000014204) #28	PIWIL4 (ENSOCUG00000002860) #30	AMOTL1 (ENSOCUG00000001078) #32	CWC15 (ENSOCUG00000001629) #34	ENSOCUG00000001631 #23	ENSOCUG00000032220 #23	ENSOCUG00000031183 #23	ENSOCUG00000035381 #23	ENSOCUG00000038702 #23	ENDOD1 (ENSOCUG00000014040) #36
Pika	MODERN SPECIES	3956																ENSOPRG00000004158 #22	ENSOPRG00000004178 #24	MRE11 (ENSOPRG00000004190) #25	ENSOPRG00000004229	ENSOPRG00000004245 #30