Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.a ##8	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT01010000223591
Glires	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.a ##8	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT01010000223591
Rodentia	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT01010000223591
Rodentia_B	ANCESTRAL SPECIES	23	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT00950000183201.a #37
Myomorpha	ANCESTRAL SPECIES	23	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT00950000183201.a #37
Muroidea	ANCESTRAL SPECIES	29	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT00950000183201.a #37
Muroidea_A	ANCESTRAL SPECIES	23	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT00950000183201.a #37
Murinae	ANCESTRAL SPECIES	3	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT00950000183201.a #37
Mus	ANCESTRAL SPECIES	4	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT00950000183201.a #37
Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT00950000183201.a #37
Ryukyu mouse	MODERN SPECIES	18	Ubtfl1 (MGP_CAROLIEiJ_G0031805) #7	Naalad2 (MGP_CAROLIEiJ_G0031804) #8	Chordc1 (MGP_CAROLIEiJ_G0031803) #9	Fat3 (MGP_CAROLIEiJ_G0031802) #10	Mtnr1b (MGP_CAROLIEiJ_G0031801) #11	Slc36a4 (MGP_CAROLIEiJ_G0031800) #12	Deup1 (MGP_CAROLIEiJ_G0031799) #13	Smco4 (MGP_CAROLIEiJ_G0031798) #14	Cep295 (MGP_CAROLIEiJ_G0031797) #15	Taf1d (MGP_CAROLIEiJ_G0031796) #16	4931406C07Rik (MGP_CAROLIEiJ_G0031795) #17	Med17 (MGP_CAROLIEiJ_G0031794) #18	Vstm5 (MGP_CAROLIEiJ_G0031793) #19	Hephl1 (MGP_CAROLIEiJ_G0031792) #20	Panx1 (MGP_CAROLIEiJ_G0031791) #21	Izumo1r (MGP_CAROLIEiJ_G0031790) #22	Gpr83 (MGP_CAROLIEiJ_G0031789) #23	Mre11a (MGP_CAROLIEiJ_G0031788) #24	Ankrd49 (MGP_CAROLIEiJ_G0031787) #25	1700012B09Rik (MGP_CAROLIEiJ_G0031786) #26	Fut4 (MGP_CAROLIEiJ_G0031785) #27	Piwil4 (MGP_CAROLIEiJ_G0031784) #28	Amotl1 (MGP_CAROLIEiJ_G0031783) #29	Cwc15 (MGP_CAROLIEiJ_G0031782) #30	Kdm4d (MGP_CAROLIEiJ_G0031781) #31	Endod1 (MGP_CAROLIEiJ_G0031780) #32	Sesn3 (MGP_CAROLIEiJ_G0031779) #33	Fam76b (MGP_CAROLIEiJ_G0031778) #34	Cep57 (MGP_CAROLIEiJ_G0031777) #35	Mtmr2 (MGP_CAROLIEiJ_G0031776) #36	Maml2 (MGP_CAROLIEiJ_G0031775) #37
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT00950000183201.a #37
Mouse	MODERN SPECIES	18	Ubtfl1 (ENSMUSG00000074502) #7	Naalad2 (ENSMUSG00000043943) #8	Chordc1 (ENSMUSG00000001774) #9	Fat3 (ENSMUSG00000074505) #10	Mtnr1b (ENSMUSG00000050901) #11	Slc36a4 (ENSMUSG00000043885) #12	Deup1 (ENSMUSG00000039977) #13	Smco4 (ENSMUSG00000058173) #14	Cep295 (ENSMUSG00000046111) #15	Taf1d (ENSMUSG00000031939) #16	4931406C07Rik (ENSMUSG00000031938) #17	Med17 (ENSMUSG00000031935) #18	Vstm5 (ENSMUSG00000031937) #19	Hephl1 (ENSMUSG00000031936) #20	Panx1 (ENSMUSG00000031934) #21	Izumo1r (ENSMUSG00000031933) #22	Gpr83 (ENSMUSG00000031932) #23	Mre11a (ENSMUSG00000031928) #24	Ankrd49 (ENSMUSG00000031931) #25	1700012B09Rik (ENSMUSG00000031927) #26	Fut4 (ENSMUSG00000049307) #27	Piwil4 (ENSMUSG00000036912) #28	Amotl1 (ENSMUSG00000013076) #29	Cwc15 (ENSMUSG00000004096) #30	Kdm4d (ENSMUSG00000053914) #31	Endod1 (ENSMUSG00000037419) #32	Sesn3 (ENSMUSG00000032009) #33	Fam76b (ENSMUSG00000037808) #34	Cep57 (ENSMUSG00000031922) #35	Mtmr2 (ENSMUSG00000031918) #36	Gm17571 (ENSMUSG00000090592)
Mus_C	ANCESTRAL SPECIES	8	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000153052.c.b.b.b.d.a.a	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT00950000183201.a #37
spretus	MODERN SPECIES	18	Ubtfl1 (MGP_SPRETEiJ_G0032925) #7	Naalad2 (MGP_SPRETEiJ_G0032924) #8	Chordc1 (MGP_SPRETEiJ_G0032923) #9	MGP_SPRETEiJ_G0032922	Fat3 (MGP_SPRETEiJ_G0032921) #10	MGP_SPRETEiJ_G0032920 #11	Slc36a4 (MGP_SPRETEiJ_G0032919) #12	Deup1 (MGP_SPRETEiJ_G0032918) #13	Smco4 (MGP_SPRETEiJ_G0032917) #14	Cep295 (MGP_SPRETEiJ_G0032916) #15	4931406C07Rik (MGP_SPRETEiJ_G0032915) #17	Med17 (MGP_SPRETEiJ_G0032914) #18	Vstm5 (MGP_SPRETEiJ_G0032913) #19	Hephl1 (MGP_SPRETEiJ_G0032912) #20	Panx1 (MGP_SPRETEiJ_G0032911) #21	Izumo1r (MGP_SPRETEiJ_G0032910) #22	MGP_SPRETEiJ_G0032909 #23	Mre11a (MGP_SPRETEiJ_G0032908) #24	Ankrd49 (MGP_SPRETEiJ_G0032907) #25	1700012B09Rik (MGP_SPRETEiJ_G0032906) #26	Fut4 (MGP_SPRETEiJ_G0032905) #27	Piwil4 (MGP_SPRETEiJ_G0032904) #28	Amotl1 (MGP_SPRETEiJ_G0032903) #29	Cwc15 (MGP_SPRETEiJ_G0032902) #30	Kdm4d (MGP_SPRETEiJ_G0032901) #31	Endod1 (MGP_SPRETEiJ_G0032900) #32	Sesn3 (MGP_SPRETEiJ_G0032899) #33	Fam76b (MGP_SPRETEiJ_G0032898) #34	Cep57 (MGP_SPRETEiJ_G0032897) #35	Mtmr2 (MGP_SPRETEiJ_G0032896) #36	Maml2 (MGP_SPRETEiJ_G0032895) #37
Steppe mouse	MODERN SPECIES	3318	ENSMSIG00000015167	ENSMSIG00000015180	ENSMSIG00000015183	Fat3 (ENSMSIG00000015207) #10	Mtnr1b (ENSMSIG00000015621) #11	Slc36a4 (ENSMSIG00000015623) #12	Deup1 (ENSMSIG00000015751) #13	ENSMSIG00000015880 #14	Cep295 (ENSMSIG00000015917) #15	Taf1d (ENSMSIG00000016165) #16	4931406C07Rik (ENSMSIG00000016204) #17	Med17 (ENSMSIG00000016253) #18	Vstm5 (ENSMSIG00000016281) #19	Hephl1 (ENSMSIG00000016306) #20	Panx1 (ENSMSIG00000016343) #21	Izumo1r (ENSMSIG00000016359) #22	Gpr83 (ENSMSIG00000016567) #23	ENSMSIG00000016588	Mre11a (ENSMSIG00000016606) #24	Ankrd49 (ENSMSIG00000016701) #25	1700012B09Rik (ENSMSIG00000016716) #26	Fut4 (ENSMSIG00000016738) #27	Piwil4 (ENSMSIG00000016745) #28	Amotl1 (ENSMSIG00000016862) #29	Cwc15 (ENSMSIG00000017024) #30	ENSMSIG00000017048 #31	Sesn3 (ENSMSIG00000017068) #33
Shrew mouse	MODERN SPECIES	1	Ubtfl1 (MGP_PahariEiJ_G0014681) #7	MGP_PahariEiJ_G0014680	Chordc1 (MGP_PahariEiJ_G0014679) #9	Fat3 (MGP_PahariEiJ_G0014678) #10	Mtnr1b (MGP_PahariEiJ_G0014677) #11	Slc36a4 (MGP_PahariEiJ_G0014676) #12	Deup1 (MGP_PahariEiJ_G0014675) #13	Smco4 (MGP_PahariEiJ_G0014674) #14	Cep295 (MGP_PahariEiJ_G0014673) #15	MGP_PahariEiJ_G0014672 #16	4931406C07Rik (MGP_PahariEiJ_G0014671) #17	Med17 (MGP_PahariEiJ_G0014670) #18	Vstm5 (MGP_PahariEiJ_G0014669) #19	MGP_PahariEiJ_G0014668 #20	Panx1 (MGP_PahariEiJ_G0014667) #21	Izumo1r (MGP_PahariEiJ_G0014666) #22	Gpr83 (MGP_PahariEiJ_G0014665) #23	Mre11a (MGP_PahariEiJ_G0014664) #24	Ankrd49 (MGP_PahariEiJ_G0014663) #25	1700012B09Rik (MGP_PahariEiJ_G0014662) #26	Fut4 (MGP_PahariEiJ_G0014661) #27	Piwil4 (MGP_PahariEiJ_G0014660) #28	Amotl1 (MGP_PahariEiJ_G0014659) #29	Cwc15 (MGP_PahariEiJ_G0014658) #30	Kdm4d (MGP_PahariEiJ_G0014657) #31	Endod1 (MGP_PahariEiJ_G0014656) #32	Sesn3 (MGP_PahariEiJ_G0014655) #33	Fam76b (MGP_PahariEiJ_G0014654) #34	Cep57 (MGP_PahariEiJ_G0014653) #35	Mtmr2 (MGP_PahariEiJ_G0014652) #36	Maml2 (MGP_PahariEiJ_G0014651) #37
Rat	MODERN SPECIES	18	Nek2l1 (ENSRNOG00000012119)	LOC689840 (ENSRNOG00000031522)	Fat3 (ENSRNOG00000011585) #10	Mtnr1b (ENSRNOG00000008972) #11	Slc36a4 (ENSRNOG00000011455) #12	Deup1 (ENSRNOG00000061247) #13	Smco4 (ENSRNOG00000011162) #14	Cep295 (ENSRNOG00000010999) #15	Taf1d (ENSRNOG00000010921) #16	C8h11orf54 (ENSRNOG00000010887) #17	Med17 (ENSRNOG00000010496) #18	Vstm5 (ENSRNOG00000010480) #19	ENSRNOG00000062992	Hephl1 (ENSRNOG00000056092) #20	Panx1 (ENSRNOG00000010060) #21	Izumo1r (ENSRNOG00000019894) #22	Gpr83 (ENSRNOG00000030318) #23	Mre11 (ENSRNOG00000009506) #24	Ankrd49 (ENSRNOG00000009233) #25	C8h11orf97 (ENSRNOG00000009203) #26	Fut4 (ENSRNOG00000009157) #27	Piwil4 (ENSRNOG00000009043) #28	Amotl1 (ENSRNOG00000008990) #29	Cwc15 (ENSRNOG00000008490) #30	LOC108348070 (ENSRNOG00000045905) #31	Endod1 (ENSRNOG00000024757) #32	Sesn3 (ENSRNOG00000008173) #33	Fam76b (ENSRNOG00000024863) #34	Cep57 (ENSRNOG00000006792) #35	Mtmr2 (ENSRNOG00000005923) #36	Maml2 (ENSRNOG00000005879) #37
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00950000183005.b.c.b	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214.m #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT00950000183201.a #37
Cricetinae	ANCESTRAL SPECIES	45		ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214.m #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT00950000183201.a #37
Chinese hamster chok1gshd	MODERN SPECIES	310	Chordc1 (ENSCGRG00001004673) #9	ENSCGRG00001007587	Fat3 (ENSCGRG00001016740) #10	Mtnr1b (ENSCGRG00001017947) #11	Slc36a4 (ENSCGRG00001005789) #12	Deup1 (ENSCGRG00001012085) #13	Smco4 (ENSCGRG00001013247) #14	ENSCGRG00001018019	Cep295 (ENSCGRG00001000538) #15	Taf1d (ENSCGRG00001004962) #16	4931406C07Rik (ENSCGRG00001008949) #17	MED17 (ENSCGRG00001017473) #18	Vstm5 (ENSCGRG00001006156) #19	Hephl1 (ENSCGRG00001014172) #20	PANX (ENSCGRG00001016361) #21	Izumo1r (ENSCGRG00001016589) #22	Gpr83 (ENSCGRG00001018677) #23	Mre11a (ENSCGRG00001006581) #24	Ankrd49 (ENSCGRG00001014107) #25	1700012B09Rik (ENSCGRG00001015499) #26	Fut4 (ENSCGRG00001013612) #27	Piwil4 (ENSCGRG00001017873) #28	Amotl1 (ENSCGRG00001011579) #29	Cwc15 (ENSCGRG00001013337) #30	Kdm4d (ENSCGRG00001013157) #31
Golden Hamster	MODERN SPECIES	778			Naalad2 (ENSMAUG00000008805) #8	Chordc1 (ENSMAUG00000012157) #9	Fat3 (ENSMAUG00000007614) #10	Slc36a4 (ENSMAUG00000001281) #12	Deup1 (ENSMAUG00000001957) #13	Smco4 (ENSMAUG00000000425) #14	Taf1d (ENSMAUG00000002515) #16	4931406C07Rik (ENSMAUG00000000356) #17	Med17 (ENSMAUG00000000493) #18	Vstm5 (ENSMAUG00000000333) #19	Hephl1 (ENSMAUG00000017278) #20	ENSMAUG00000015499 #21	ENSMAUG00000015032	Izumo1r (ENSMAUG00000018564) #22	Gpr83 (ENSMAUG00000017943) #23	ENSMAUG00000016290 #24	Ankrd49 (ENSMAUG00000014988) #25	1700012B09Rik (ENSMAUG00000014010) #26	ENSMAUG00000015824	Fut4 (ENSMAUG00000015849) #27	Piwil4 (ENSMAUG00000011382) #28	Amotl1 (ENSMAUG00000012162) #29	Cwc15 (ENSMAUG00000011686) #30	Kdm4d (ENSMAUG00000010975) #31	Endod1 (ENSMAUG00000010649) #32	Sesn3 (ENSMAUG00000009718) #33
Cricetidae_B	ANCESTRAL SPECIES	61	ENSGT00950000183005.b.c.b	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214.m #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31
Northern American deer mouse	MODERN SPECIES	20	Chordc1 (ENSPEMG00000030600) #9	ENSPEMG00000031155	Fat3 (ENSPEMG00000013197) #10	Mtnr1b (ENSPEMG00000000316) #11	Slc36a4 (ENSPEMG00000023886) #12	Deup1 (ENSPEMG00000016493) #13	Smco4 (ENSPEMG00000027427) #14	Cep295 (ENSPEMG00000023772) #15	Taf1d (ENSPEMG00000023691) #16	4931406C07Rik (ENSPEMG00000023421) #17	Med17 (ENSPEMG00000024047) #18	Vstm5 (ENSPEMG00000028348) #19	ENSPEMG00000002357	Hephl1 (ENSPEMG00000021631) #20	Panx1 (ENSPEMG00000010979) #21	Izumo1r (ENSPEMG00000021678) #22	Gpr83 (ENSPEMG00000022377) #23	ENSPEMG00000030623	Mre11a (ENSPEMG00000023250) #24	1700012B09Rik (ENSPEMG00000012698) #26	ENSPEMG00000025171 #27	Piwil4 (ENSPEMG00000023859) #28	Amotl1 (ENSPEMG00000021905) #29	Cwc15 (ENSPEMG00000021432) #30	Kdm4d (ENSPEMG00000001845) #31	Alkbh8 (ENSPEMG00000022020)	Cwf19l2 (ENSPEMG00000022399)	Gucy1a2 (ENSPEMG00000021986)	ENSPEMG00000025699	Aasdhppt (ENSPEMG00000016551)	Kbtbd3 (ENSPEMG00000029070)
Prairie vole	MODERN SPECIES	204												Hephl1 (ENSMOCG00000002936) #20	ENSMOCG00000018402 #21	ENSMOCG00000012579	ENSMOCG00000010783	Izumo1r (ENSMOCG00000012181) #22	Gpr83 (ENSMOCG00000008157) #23	ENSMOCG00000011442 #24	Ankrd49 (ENSMOCG00000000210) #25	1700012B09Rik (ENSMOCG00000020476) #26	Fut4 (ENSMOCG00000012642) #27	Piwil4 (ENSMOCG00000020261) #28	Amotl1 (ENSMOCG00000014408) #29	Cwc15 (ENSMOCG00000016094) #30	Kdm4d (ENSMOCG00000008583) #31
Upper Galilee mountains blind mole rat	MODERN SPECIES	1827							Deup1 (ENSNGAG00000015010) #13	Smco4 (ENSNGAG00000019710) #14	Cep295 (ENSNGAG00000020811) #15	4931406C07Rik (ENSNGAG00000019210) #17	Med17 (ENSNGAG00000005765) #18	Vstm5 (ENSNGAG00000008846) #19	Hephl1 (ENSNGAG00000012499) #20	ENSNGAG00000004656	Panx1 (ENSNGAG00000014760) #21	Izumo1r (ENSNGAG00000009610) #22	Gpr83 (ENSNGAG00000015036) #23	Mre11a (ENSNGAG00000010330) #24	Ankrd49 (ENSNGAG00000012789) #25	1700012B09Rik (ENSNGAG00000013078) #26	Piwil4 (ENSNGAG00000022297) #28	Amotl1 (ENSNGAG00000012913) #29	Cwc15 (ENSNGAG00000016450) #30	Kdm4d (ENSNGAG00000019223) #31	Endod1 (ENSNGAG00000019861) #32	Sesn3 (ENSNGAG00000007814) #33
Lesser Egyptian jerboa	MODERN SPECIES	87	Cyfip1 (ENSJJAG00000018373)	Tubgcp5 (ENSJJAG00000018158)	Naalad2 (ENSJJAG00000016701) #8	Chordc1 (ENSJJAG00000015757) #9	ENSJJAG00000011242	ENSJJAG00000010000	ENSJJAG00000000974	ENSJJAG00000024255	Fat3 (ENSJJAG00000018504) #10	Deup1 (ENSJJAG00000000219) #13	Smco4 (ENSJJAG00000000940) #14	Cep295 (ENSJJAG00000001043) #15	Vstm5 (ENSJJAG00000019443) #19	Hephl1 (ENSJJAG00000015710) #20	Panx1 (ENSJJAG00000024378) #21	Izumo1r (ENSJJAG00000018637) #22	Mre11a (ENSJJAG00000009794) #24	Ankrd49 (ENSJJAG00000023374) #25	1700012B09Rik (ENSJJAG00000020782) #26	Fut4 (ENSJJAG00000015747) #27	ENSJJAG00000002783	Amotl1 (ENSJJAG00000000834) #29	ENSJJAG00000016968 #30	ENSJJAG00000015656 #31	Sesn3 (ENSJJAG00000019262) #33	Fam76b (ENSJJAG00000017450) #34	Cep57 (ENSJJAG00000013938) #35	Mtmr2 (ENSJJAG00000009913) #36	ENSJJAG00000002824 #37	Ccdc82 (ENSJJAG00000017966)	Jrkl (ENSJJAG00000000663)
Kangaroo rat	MODERN SPECIES	433					Fat3 (ENSDORG00000024314) #10	Mtnr1b (ENSDORG00000026210) #11	ENSDORG00000002749	Slc36a4 (ENSDORG00000027198) #12	Deup1 (ENSDORG00000011685) #13	Smco4 (ENSDORG00000001107) #14	4931406C07Rik (ENSDORG00000005004) #17	Med17 (ENSDORG00000005005) #18	Vstm5 (ENSDORG00000004620) #19	Hephl1 (ENSDORG00000005176) #20	ENSDORG00000028004	Izumo1r (ENSDORG00000005007) #22	Gpr83 (ENSDORG00000004374) #23	ENSDORG00000004828 #24	Iws1 (ENSDORG00000007385)	Myo7b (ENSDORG00000015044)	Gpr17 (ENSDORG00000015052)	Lims2 (ENSDORG00000015051)	Wdr33 (ENSDORG00000023513)	Polr2d (ENSDORG00000026897)	Ammecr1l (ENSDORG00000028104)	Sap130 (ENSDORG00000015563)	Uggt1 (ENSDORG00000003315)	Hs6st1 (ENSDORG00000028206)	ENSDORG00000026180	ENSDORG00000026195	Fam168b (ENSDORG00000015352)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.f #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT01010000223591
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000163419	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.f #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152.g.a #31	ENSGT00940000162152.g.b #31	ENSGT00940000162152.h #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35
Marmotini	ANCESTRAL SPECIES	20	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.f #9	ENSGT00940000178162	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152.g.a #31	ENSGT00940000162152.g.b #31	ENSGT00940000162152.h #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35
Alpin marmot	MODERN SPECIES	25	CHORDC1 (ENSMMMG00000004692) #9	ENSMMMG00000004674	ENSMMMG00000004671	FAT3 (ENSMMMG00000004600) #10	MTNR1B (ENSMMMG00000004580) #11	SLC36A4 (ENSMMMG00000004555) #12	DEUP1 (ENSMMMG00000004469) #13	SMCO4 (ENSMMMG00000004447) #14	CEP295 (ENSMMMG00000004214) #15	TAF1D (ENSMMMG00000004115) #16	C11orf54 (ENSMMMG00000004067) #17	MED17 (ENSMMMG00000004045) #18	VSTM5 (ENSMMMG00000004034) #19	HEPHL1 (ENSMMMG00000003995) #20	PANX1 (ENSMMMG00000003980) #21	IZUMO1R (ENSMMMG00000003960) #22	GPR83 (ENSMMMG00000003939) #23	MRE11 (ENSMMMG00000003822) #24	ANKRD49 (ENSMMMG00000003801) #25	C11orf97 (ENSMMMG00000003791) #26	FUT4 (ENSMMMG00000003775) #27	PIWIL4 (ENSMMMG00000003741) #28	AMOTL1 (ENSMMMG00000003717) #29	CWC15 (ENSMMMG00000003695) #30	ENSMMMG00000003692 #31	ENSMMMG00000003680 #31	ENSMMMG00000003674 #31	ENSMMMG00000003662 #31	ENDOD1 (ENSMMMG00000003657) #32	SESN3 (ENSMMMG00000003584) #33	ENSMMMG00000003554
Marmotini_b	ANCESTRAL SPECIES	155			ENSGT00940000178162	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152.g.a #31	ENSGT00940000162152.g.b #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36
Squirrel	MODERN SPECIES	274		FAT3 (ENSSTOG00000008783) #10	MTNR1B (ENSSTOG00000008849) #11	SLC36A4 (ENSSTOG00000008854) #12	DEUP1 (ENSSTOG00000011722) #13	SMCO4 (ENSSTOG00000008008) #14	CEP295 (ENSSTOG00000008015) #15	TAF1D (ENSSTOG00000030516) #16	C11orf54 (ENSSTOG00000008061) #17	MED17 (ENSSTOG00000008098) #18	VSTM5 (ENSSTOG00000025751) #19	ENSSTOG00000033997	HEPHL1 (ENSSTOG00000026323) #20	PANX1 (ENSSTOG00000006851) #21	ENSSTOG00000032468	IZUMO1R (ENSSTOG00000032389) #22	GPR83 (ENSSTOG00000006859) #23	MRE11 (ENSSTOG00000006869) #24	ANKRD49 (ENSSTOG00000028263) #25	C11orf97 (ENSSTOG00000032509) #26	FUT4 (ENSSTOG00000006910) #27	ENSSTOG00000006932 #28	AMOTL1 (ENSSTOG00000002462) #29	CWC15 (ENSSTOG00000002485) #30	KDM4D (ENSSTOG00000021726) #31
Arctic ground squirrel	MODERN SPECIES	166			ENSUPAG00010000873	FAT3 (ENSUPAG00010000879) #10	MTNR1B (ENSUPAG00010000937) #11	SLC36A4 (ENSUPAG00010000949) #12	DEUP1 (ENSUPAG00010000984) #13	CEP295 (ENSUPAG00010001137) #15	TAF1D (ENSUPAG00010001478) #16	C11orf54 (ENSUPAG00010001486) #17	MED17 (ENSUPAG00010001622) #18	VSTM5 (ENSUPAG00010001672) #19	HEPHL1 (ENSUPAG00010001691) #20	PANX1 (ENSUPAG00010001730) #21	ENSUPAG00010001744	IZUMO1R (ENSUPAG00010001756) #22	GPR83 (ENSUPAG00010001763) #23	MRE11 (ENSUPAG00010001790) #24	ANKRD49 (ENSUPAG00010001896) #25	C11orf97 (ENSUPAG00010001935) #26	FUT4 (ENSUPAG00010001953) #27	PIWIL4 (ENSUPAG00010001982) #28	AMOTL1 (ENSUPAG00010002044) #29	CWC15 (ENSUPAG00010002076) #30	KDM4D (ENSUPAG00010002086) #31	ENDOD1 (ENSUPAG00010002099) #32	SESN3 (ENSUPAG00010002105) #33	ENSUPAG00010002123	ENSUPAG00010002131
Eurasian red squirrel	MODERN SPECIES	2	NAALAD2 (ENSSVLG00005023397) #8	ENSSVLG00005023505 #9	FAT3 (ENSSVLG00005023682) #10	MTNR1B (ENSSVLG00005023956) #11	SLC36A4 (ENSSVLG00005023972) #12	ENSSVLG00005024017	DEUP1 (ENSSVLG00005024034) #13	SMCO4 (ENSSVLG00005024149) #14	CEP295 (ENSSVLG00005024179) #15	TAF1D (ENSSVLG00005008868) #16	C11orf54 (ENSSVLG00005008945) #17	MED17 (ENSSVLG00005009035) #18	VSTM5 (ENSSVLG00005009102) #19	HEPHL1 (ENSSVLG00005009168) #20	PANX1 (ENSSVLG00005009275) #21	IZUMO1R (ENSSVLG00005009300) #22	GPR83 (ENSSVLG00005009337) #23	MRE11 (ENSSVLG00005009395) #24	ENSSVLG00005009454	ANKRD49 (ENSSVLG00005009488) #25	C11orf97 (ENSSVLG00005009503) #26	FUT4 (ENSSVLG00005009540) #27	PIWIL4 (ENSSVLG00005009583) #28	AMOTL1 (ENSSVLG00005009738) #29	CWC15 (ENSSVLG00005009802) #30	KDM4D (ENSSVLG00005009838) #31	ENSSVLG00005009855 #31	ENDOD1 (ENSSVLG00005009881) #32	SESN3 (ENSSVLG00005009932) #33	ENSSVLG00005010116 #34	CEP57 (ENSSVLG00005010241) #35
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.f #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084.u #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT01010000223591
Hystricomorpha_a	ANCESTRAL SPECIES	10	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.f #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084.u #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT00950000183201.a #37
Hystricomorpha_b	ANCESTRAL SPECIES	5	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.f #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25
Long-tailed chinchilla	MODERN SPECIES	121	NAALAD2 (ENSCLAG00000012474) #8	ENSCLAG00000014963 #9	FAT3 (ENSCLAG00000013669) #10	ENSCLAG00000012677	MTNR1B (ENSCLAG00000012055) #11	SLC36A4 (ENSCLAG00000015872) #12	DEUP1 (ENSCLAG00000013832) #13	SMCO4 (ENSCLAG00000011932) #14	CEP295 (ENSCLAG00000014683) #15	TAF1D (ENSCLAG00000014698) #16	C11orf54 (ENSCLAG00000017272) #17	MED17 (ENSCLAG00000017202) #18	VSTM5 (ENSCLAG00000016423) #19	HEPHL1 (ENSCLAG00000015721) #20	PANX1 (ENSCLAG00000014612) #21	IZUMO1R (ENSCLAG00000015110) #22	ENSCLAG00000013252	GPR83 (ENSCLAG00000013629) #23	ENSCLAG00000013392 #24	ANKRD49 (ENSCLAG00000015054) #25
Degu	MODERN SPECIES	250	ENSODEG00000018835	ENSODEG00000002534	FAT3 (ENSODEG00000002606) #10	MTNR1B (ENSODEG00000002125) #11	SLC36A4 (ENSODEG00000002145) #12	DEUP1 (ENSODEG00000002198) #13	SMCO4 (ENSODEG00000018804) #14	TAF1D (ENSODEG00000002225) #16	C11orf54 (ENSODEG00000002265) #17	MED17 (ENSODEG00000002353) #18	VSTM5 (ENSODEG00000002406) #19	ENSODEG00000002422	HEPHL1 (ENSODEG00000002492) #20	ENSODEG00000000644 #21	ENSODEG00000000623	IZUMO1R (ENSODEG00000000695) #22	GPR83 (ENSODEG00000000724) #23	ENSODEG00000001221 #25	ENSODEG00000001233
Guinea pig	MODERN SPECIES	40	FOLH1 (ENSCPOG00000003797) ##8	NAALAD2 (ENSCPOG00000038440) #8	CHORDC1 (ENSCPOG00000022614) #9	ENSCPOG00000010626 #10	MTNR1B (ENSCPOG00000010637) #11	SLC36A4 (ENSCPOG00000036098) #12	DEUP1 (ENSCPOG00000011016) #13	SMCO4 (ENSCPOG00000032286) #14	CEP295 (ENSCPOG00000032006) #15	TAF1D (ENSCPOG00000002426) #16	C11orf54 (ENSCPOG00000014146) #17	MED17 (ENSCPOG00000014149) #18	VSTM5 (ENSCPOG00000024881) #19	HEPHL1 (ENSCPOG00000004098) #20	PANX1 (ENSCPOG00000039148) #21	IZUMO1R (ENSCPOG00000011657) #22	GPR83 (ENSCPOG00000039200) #23	MRE11 (ENSCPOG00000014563) #24	ANKRD49 (ENSCPOG00000030391) #25	C11orf97 (ENSCPOG00000031459) #26	FUT4 (ENSCPOG00000000069) #27	PIWIL4 (ENSCPOG00000000070) #28	AMOTL1 (ENSCPOG00000006241) #29	CWC15 (ENSCPOG00000006249) #30	KDM4D (ENSCPOG00000006256) #31
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000050821	FAT3 (ENSHGLG00000010388) #10	ENSHGLG00000044735 #11	SLC36A4 (ENSHGLG00000044885) #12	ENSHGLG00000020910	ENSHGLG00000014481 #15	C11orf54 (ENSHGLG00000012597) #17	TAF1D (ENSHGLG00000008795) #16	MED17 (ENSHGLG00000006191) #18	VSTM5 (ENSHGLG00000007424) #19	ENSHGLG00000048701	ENSHGLG00000049421	HEPHL1 (ENSHGLG00000005416) #20	PANX1 (ENSHGLG00000007682) #21	ENSHGLG00000050118	IZUMO1R (ENSHGLG00000008985) #22	ENSHGLG00000019637 #31	GPR83 (ENSHGLG00000018711) #23	MRE11A (ENSHGLG00000015754) #24	ANKRD49 (ENSHGLG00000014039) #25	ENSHGLG00000014136 #26	FUT4 (ENSHGLG00000005608) #27	ENSHGLG00000005671	PIWIL4 (ENSHGLG00000007416) #28	ENSHGLG00000008729	AMOTL1 (ENSHGLG00000010959) #29	ENSHGLG00000049265	ENSHGLG00000035638 #30	ENSHGLG00000032452 #31	ENSHGLG00000043269 #32	ENSHGLG00000046281 #14
Lagomorpha	ANCESTRAL SPECIES	5	ENSGT01030000234598.b.a.b.k.a ##8	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158 #29	ENSGT00390000012084 #30	ENSGT00940000162152 #31	ENSGT01030000234592.B #32	ENSGT00950000183168.A #33	ENSGT00940000159074 #34	ENSGT00530000063695.a #35	ENSGT00940000153669.a #36	ENSGT00950000183201.a #37
Rabbit	MODERN SPECIES		NAALAD2 (ENSOCUG00000014137) #8	ENSOCUG00000014147 #9	ENSOCUG00000023399	FAT3 (ENSOCUG00000007427) #10	MTNR1B (ENSOCUG00000008196) #11	SLC36A4 (ENSOCUG00000000649) #12	DEUP1 (ENSOCUG00000000199) #13	CEP295 (ENSOCUG00000029678) #15	ENSOCUG00000001096 #16	C11orf54 (ENSOCUG00000012810) #17	MED17 (ENSOCUG00000012818) #18	VSTM5 (ENSOCUG00000026554) #19	ENSOCUG00000029520	HEPHL1 (ENSOCUG00000009466) #20	PANX1 (ENSOCUG00000009473) #21	IZUMO1R (ENSOCUG00000013431) #22	GPR83 (ENSOCUG00000015502) #23	MRE11 (ENSOCUG00000014899) #24	ANKRD49 (ENSOCUG00000014912) #25	ENSOCUG00000033194	C11orf97 (ENSOCUG00000034472) #26	FUT4 (ENSOCUG00000014204) #27	PIWIL4 (ENSOCUG00000002860) #28	AMOTL1 (ENSOCUG00000001078) #29	CWC15 (ENSOCUG00000001629) #30	ENSOCUG00000001631 #31	ENSOCUG00000032220 #31	ENSOCUG00000031183 #31	ENSOCUG00000035381 #31	ENSOCUG00000038702 #31	ENDOD1 (ENSOCUG00000014040) #32
Pika	MODERN SPECIES	3956																ENSOPRG00000004158 #22	ENSOPRG00000004178 #23	MRE11 (ENSOPRG00000004190) #24	ENSOPRG00000004229	ENSOPRG00000004245 #28
Tree shrew	MODERN SPECIES	4448																IZUMO1R (ENSTBEG00000006316) #22	GPR83 (ENSTBEG00000006734) #23