Chordata	DUPLICATION
Chordata	ANCESTRAL SPECIES																	ENSGT00950000183144.A #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000183144.A #22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00950000183144.A #22
Euteleostomi	ANCESTRAL SPECIES	97	ENSGT00550000074799	ENSGT00510000047299	ENSGT00940000155158	ENSGT00390000000214.a.a	ENSGT00940000165269	ENSGT00910000144246	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000175321	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b	ENSGT00390000015701	ENSGT00950000182944.A	ENSGT00440000038181	ENSGT00940000153680.b	ENSGT00390000006450
Sarcopterygii	ANCESTRAL SPECIES	175	ENSGT00510000047299	ENSGT00940000168166	ENSGT00940000155158	ENSGT00390000000214.a.a	ENSGT00940000165269	ENSGT00910000144246	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882
Tetrapoda	ANCESTRAL SPECIES	114	ENSGT00940000165269	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00940000159817
Amniota	ANCESTRAL SPECIES	60	ENSGT00940000165269	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT00940000169757	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00940000159817
Mammalia	DUPLICATION
Mammalia	ANCESTRAL SPECIES																	ENSGT00950000183144.A.j #22
Theria	ANCESTRAL SPECIES	15	ENSGT01030000234598.b.a.b.k.a ##8	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT01010000223591	ENSGT00950000183201.a
Eutheria	ANCESTRAL SPECIES	3	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162741.i.b	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT01010000223591
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162741.i.b	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a
Primates	ANCESTRAL SPECIES		ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000163213.a.b #7	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.s.a.a.a #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919 #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078	ENSGT00940000154883.g.a	ENSGT01030000234592.B	ENSGT00910000147059	ENSGT00950000183168.A
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00940000163213.a.b #7	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.s.a.a.a #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078	ENSGT00940000154883.g.a	ENSGT01030000234592.B	ENSGT00910000147059	ENSGT00950000183168.A	ENSGT00940000159074
Cebidae	ANCESTRAL SPECIES		ENSGT00940000163213.a.b #7	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.s.a.a.a #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158.e.b	ENSGT00940000160158.e.a	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078	ENSGT00940000154883.g.a	ENSGT01030000234592.B	ENSGT00910000147059	ENSGT00950000183168.A
Cebidae_a	ANCESTRAL SPECIES	73	ENSGT00940000163213.a.b #7	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.s.a.a.a #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158.e.b
Bolivian squirrel monkey	MODERN SPECIES	188	ENSSBOG00000030835 #7	NAALAD2 (ENSSBOG00000025125) #8	ENSSBOG00000023416 #9	FAT3 (ENSSBOG00000020939) #10	MTNR1B (ENSSBOG00000020942) #11	SLC36A4 (ENSSBOG00000022344) #12	DEUP1 (ENSSBOG00000026759) #13	SMCO4 (ENSSBOG00000011877) #14	CEP295 (ENSSBOG00000019495) #15	TAF1D (ENSSBOG00000027735) #16	C11orf54 (ENSSBOG00000032062) #17	MED17 (ENSSBOG00000003072) #18	VSTM5 (ENSSBOG00000025938) #19	HEPHL1 (ENSSBOG00000034453) #20	PANX1 (ENSSBOG00000009703) #21	IZUMO1R (ENSSBOG00000021841) #22	GPR83 (ENSSBOG00000024347) #23	MRE11 (ENSSBOG00000016957) #24	ANKRD49 (ENSSBOG00000034549) #25	C11orf97 (ENSSBOG00000017516) #26	FUT4 (ENSSBOG00000020691) #27	PIWIL4 (ENSSBOG00000024534) #28
Capuchin	MODERN SPECIES	241				ENSCCAG00000019974	FAT3 (ENSCCAG00000029618) #10	SLC36A4 (ENSCCAG00000029908) #12	DEUP1 (ENSCCAG00000025548) #13	SMCO4 (ENSCCAG00000019420) #14	CEP295 (ENSCCAG00000025065) #15	TAF1D (ENSCCAG00000018289) #16	ENSCCAG00000025059 #17	MED17 (ENSCCAG00000034414) #18	VSTM5 (ENSCCAG00000021584) #19	HEPHL1 (ENSCCAG00000030082) #20	PANX1 (ENSCCAG00000007465) #21	IZUMO1R (ENSCCAG00000021617) #22	GPR83 (ENSCCAG00000028755) #23	MRE11 (ENSCCAG00000013972) #24	ANKRD49 (ENSCCAG00000027797) #25	C11orf97 (ENSCCAG00000029425) #26	FUT4 (ENSCCAG00000013593) #27	ENSCCAG00000021211	PIWIL4 (ENSCCAG00000017581) #28	ENSCCAG00000036203
Marmoset	MODERN SPECIES	2	SLC36A4 (ENSCJAG00000011030) #12	ENSCJAG00000077134	ENSCJAG00000072456	ENSCJAG00000054190	ENSCJAG00000072971	ENSCJAG00000085342	DEUP1 (ENSCJAG00000003734) #13	SMCO4 (ENSCJAG00000045722) #14	CEP295 (ENSCJAG00000003748) #15	TAF1D (ENSCJAG00000003782) #16	ENSCJAG00000084182	MED17 (ENSCJAG00000003839) #18	VSTM5 (ENSCJAG00000003861) #19	HEPHL1 (ENSCJAG00000003906) #20	PANX1 (ENSCJAG00000003952) #21	IZUMO1R (ENSCJAG00000003960) #22	GPR83 (ENSCJAG00000003972) #23	MRE11 (ENSCJAG00000003984) #24	ANKRD49 (ENSCJAG00000083691) #25	C11orf97 (ENSCJAG00000087393) #26	FUT4 (ENSCJAG00000074794) #27	PIWIL4 (ENSCJAG00000004075) #28	ENSCJAG00000065220	ENSCJAG00000070716	AMOTL1 (ENSCJAG00000004124)	CWC15 (ENSCJAG00000040352)	KDM4D (ENSCJAG00000023319)	ENSCJAG00000072491	ENDOD1 (ENSCJAG00000039825)	ENSCJAG00000004220	FAM76B (ENSCJAG00000040122)
Mas night monkey	MODERN SPECIES	1013	ENSANAG00000023865	FAT3 (ENSANAG00000026539) #10	MTNR1B (ENSANAG00000021351) #11	SLC36A4 (ENSANAG00000028156) #12	DEUP1 (ENSANAG00000031473) #13	SMCO4 (ENSANAG00000015761) #14	ENSANAG00000029028	CEP295 (ENSANAG00000032138) #15	TAF1D (ENSANAG00000022083) #16	ENSANAG00000029536	C11orf54 (ENSANAG00000033486) #17	MED17 (ENSANAG00000032438) #18	VSTM5 (ENSANAG00000022799) #19	HEPHL1 (ENSANAG00000030738) #20	PANX1 (ENSANAG00000030398) #21	IZUMO1R (ENSANAG00000030382) #22	GPR83 (ENSANAG00000021555) #23	ENSANAG00000010232	MRE11 (ENSANAG00000020274) #24	ANKRD49 (ENSANAG00000030055) #25	C11orf97 (ENSANAG00000023746) #26	FUT4 (ENSANAG00000011701) #27	PIWIL4 (ENSANAG00000031191) #28	AMOTL1 (ENSANAG00000033879)
Catarrhini	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.s.a.a.a #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00390000013073.a	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919.e #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078.a	ENSGT00940000154883.g.a.b	ENSGT00940000165078.b	ENSGT00940000154883.g.a.a	ENSGT01030000234592.B
Cercopithecidae	ANCESTRAL SPECIES		ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.s.a.a.a #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00390000013073.a	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919.e #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078.a	ENSGT00940000154883.g.a.b	ENSGT00940000165078.b	ENSGT00940000154883.g.a.a	ENSGT01030000234592.B
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.s.a.a.a #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00390000013073.a	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919.e #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078.a	ENSGT00940000154883.g.a.b	ENSGT00940000165078.b	ENSGT00940000154883.g.a.a	ENSGT01030000234592.B
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.s.a.a.a #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00390000013073.a	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919.e #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078.a	ENSGT00940000154883.g.a.b	ENSGT00940000165078.b	ENSGT00940000154883.g.a.a	ENSGT01030000234592.B
Cercopithecinae_b	ANCESTRAL SPECIES	21	ENSGT00940000163213.a.a ##7	ENSGT00940000167275	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00390000013073.a	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919.e #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078.a	ENSGT00940000165078.b	ENSGT00940000154883.g.a.a	ENSGT01030000234592.B	ENSGT00910000147059
Cercopithecinae_d	ANCESTRAL SPECIES	45	ENSGT00940000167275	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00390000013073.a	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT00910000147855	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919.e #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078.a	ENSGT00940000154883.g.a.b	ENSGT00940000154883.g.a.a	ENSGT01030000234592.B	ENSGT00910000147059
Drill	MODERN SPECIES	1152	ENSMLEG00000034203	FAT3 (ENSMLEG00000038737) #10	MTNR1B (ENSMLEG00000039776) #11	SLC36A4 (ENSMLEG00000030119) #12	DEUP1 (ENSMLEG00000037342) #13	SMCO4 (ENSMLEG00000022536) #14	ENSMLEG00000001837	CEP295 (ENSMLEG00000033140) #15	TAF1D (ENSMLEG00000039639) #16	C11orf54 (ENSMLEG00000035235) #17	MED17 (ENSMLEG00000027939) #18	ENSMLEG00000035673	VSTM5 (ENSMLEG00000027079) #19	HEPHL1 (ENSMLEG00000038476) #20	PANX1 (ENSMLEG00000041168) #21	IZUMO1R (ENSMLEG00000033707) #22	GPR83 (ENSMLEG00000032323) #23
Olive baboon	MODERN SPECIES	3	MTNR1B (ENSPANG00000018013) #11	ENSPANG00000044418	ENSPANG00000047752	SLC36A4 (ENSPANG00000004551) #12	DEUP1 (ENSPANG00000010678) #13	SMCO4 (ENSPANG00000000062) #14	CEP295 (ENSPANG00000008341) #15	TAF1D (ENSPANG00000018408) #16	C11orf54 (ENSPANG00000008370) #17	MED17 (ENSPANG00000022409) #18	VSTM5 (ENSPANG00000004039) #19	ENSPANG00000045474	HEPHL1 (ENSPANG00000019176) #20	PANX1 (ENSPANG00000019663) #21	ENSPANG00000040070	IZUMO1R (ENSPANG00000034439) #22	ENSPANG00000040668	MRE11 (ENSPANG00000017475) #24	ENSPANG00000032105 #26	FUT4 (ENSPANG00000051031) #27	ENSPANG00000046304	PIWIL4 (ENSPANG00000016066) #28	AMOTL1 (ENSPANG00000018871)	CWC15 (ENSPANG00000019125)	KDM4D (ENSPANG00000000063)	KDM4E (ENSPANG00000047397)	KDM4F (ENSPANG00000038422)	SRSF8 (ENSPANG00000032291)	ENDOD1 (ENSPANG00000009553)	SESN3 (ENSPANG00000012747)	FAM76B (ENSPANG00000006473)
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.a.b.a.b.b.a.b	ENSGT00940000154174.s.a.a.a #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00390000013073.a	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919.e #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078.a	ENSGT00940000165078.b	ENSGT00940000154883.g.a.a	ENSGT01030000234592.B	ENSGT00910000147059	ENSGT00950000183168.A
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000163440.a.b.a	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.s.a.a.a #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00390000017288.c #24	ENSGT00390000003919.e #25	ENSGT00520000058823 #26	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078.a	ENSGT00940000165078.b	ENSGT00940000154883.g.a.a	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a
Rhesus	MODERN SPECIES	5	ENSMMUG00000063681 ##7	NAALAD2 (ENSMMUG00000005207) #8	CHORDC1 (ENSMMUG00000005209) #9	ENSMMUG00000061386	FAT3 (ENSMMUG00000060452) #10	ENSMMUG00000051474 #11	SLC36A4 (ENSMMUG00000017741) #12	DEUP1 (ENSMMUG00000006665) #13	SMCO4 (ENSMMUG00000040519) #14	CEP295 (ENSMMUG00000008025) #15	TAF1D (ENSMMUG00000011646) #16	MED17 (ENSMMUG00000013601) #18	VSTM5 (ENSMMUG00000061600) #19	HEPHL1 (ENSMMUG00000004500) #20	PANX1 (ENSMMUG00000004503) #21	IZUMO1R (ENSMMUG00000040247) #22	MRE11 (ENSMMUG00000004112) #24	ANKRD49 (ENSMMUG00000061391) #25	C14H11orf97 (ENSMMUG00000062781) #26	PIWIL4 (ENSMMUG00000008965) #28	AMOTL1 (ENSMMUG00000001730)	CWC15 (ENSMMUG00000044962)	KDM4D (ENSMMUG00000023376)	KDM4E (ENSMMUG00000059644)	KDM4F (ENSMMUG00000045019)	SRSF8 (ENSMMUG00000007639)	ENDOD1 (ENSMMUG00000047793)	SESN3 (ENSMMUG00000009394)	FAM76B (ENSMMUG00000014792)	CEP57 (ENSMMUG00000014796)	MTMR2 (ENSMMUG00000014801)
Crab-eating macaque	MODERN SPECIES	5	NAALAD2 (ENSMFAG00000034412) #8	CHORDC1 (ENSMFAG00000035565) #9	FAT3 (ENSMFAG00000035883) #10	ENSMFAG00000055749	MTNR1B (ENSMFAG00000038271) #11	SLC36A4 (ENSMFAG00000041537) #12	DEUP1 (ENSMFAG00000032572) #13	CEP295 (ENSMFAG00000041174) #15	TAF1D (ENSMFAG00000039236) #16	C11orf54 (ENSMFAG00000039634) #17	ENSMFAG00000048679	MED17 (ENSMFAG00000003118) #18	VSTM5 (ENSMFAG00000054321) #19	HEPHL1 (ENSMFAG00000046086) #20	PANX1 (ENSMFAG00000002464) #21	IZUMO1R (ENSMFAG00000030684) #22	MRE11 (ENSMFAG00000039328) #24	ANKRD49 (ENSMFAG00000038557) #25	C11orf97 (ENSMFAG00000044586) #26	PIWIL4 (ENSMFAG00000042631) #28	AMOTL1 (ENSMFAG00000032749)	CWC15 (ENSMFAG00000044052)	KDM4D (ENSMFAG00000024894)	ENSMFAG00000040102	KDM4F (ENSMFAG00000059067)	ENDOD1 (ENSMFAG00000055848)	ENSMFAG00000055573	SESN3 (ENSMFAG00000040069)	ENSMFAG00000048059	FAM76B (ENSMFAG00000042981)	CEP57 (ENSMFAG00000003768)
Pig-tailed macaque	MODERN SPECIES	109	ENSMNEG00000013846	ENSMNEG00000032920	FAT3 (ENSMNEG00000033595) #10	MTNR1B (ENSMNEG00000031635) #11	SLC36A4 (ENSMNEG00000044920) #12	DEUP1 (ENSMNEG00000041961) #13	SMCO4 (ENSMNEG00000013588) #14	ENSMNEG00000042890	CEP295 (ENSMNEG00000041554) #15	TAF1D (ENSMNEG00000040024) #16	C11orf54 (ENSMNEG00000013934) #17	MED17 (ENSMNEG00000028879) #18	VSTM5 (ENSMNEG00000045447) #19	HEPHL1 (ENSMNEG00000038689) #20	PANX1 (ENSMNEG00000035007) #21	IZUMO1R (ENSMNEG00000030482) #22	GPR83 (ENSMNEG00000043160) #23	MRE11 (ENSMNEG00000029815) #24	ANKRD49 (ENSMNEG00000034043) #25	ENSMNEG00000020136	C11orf97 (ENSMNEG00000031514) #26	PIWIL4 (ENSMNEG00000037456) #28	AMOTL1 (ENSMNEG00000044021)	CWC15 (ENSMNEG00000033968)	KDM4D (ENSMNEG00000026134)	ENSMNEG00000035040	SRSF8 (ENSMNEG00000027570)	ENDOD1 (ENSMNEG00000040186)	ENSMNEG00000007007	SESN3 (ENSMNEG00000030326)	FAM76B (ENSMNEG00000009651)
Vervet Monkey	MODERN SPECIES		ENSCSAG00000000609	FAT3 (ENSCSAG00000003512) #10	ENSCSAG00000003478	MTNR1B (ENSCSAG00000003473) #11	SLC36A4 (ENSCSAG00000003469) #12	DEUP1 (ENSCSAG00000003465) #13	SMCO4 (ENSCSAG00000000608) #14	ENSCSAG00000003461	CEP295 (ENSCSAG00000003445) #15	TAF1D (ENSCSAG00000003431) #16	C11orf54 (ENSCSAG00000003429) #17	MED17 (ENSCSAG00000003426) #18	VSTM5 (ENSCSAG00000003423) #19	HEPHL1 (ENSCSAG00000003418) #20	PANX1 (ENSCSAG00000003406) #21	IZUMO1R (ENSCSAG00000003400) #22	GPR83 (ENSCSAG00000003397) #23	MRE11 (ENSCSAG00000003391) #24	ANKRD49 (ENSCSAG00000003379) #25	C11orf97 (ENSCSAG00000003377) #26	FUT4 (ENSCSAG00000000607) #27	PIWIL4 (ENSCSAG00000003360) #28	AMOTL1 (ENSCSAG00000003315)	CWC15 (ENSCSAG00000003299)	KDM4D (ENSCSAG00000003295)	KDM4E (ENSCSAG00000003292)	ENDOD1 (ENSCSAG00000003290)	SESN3 (ENSCSAG00000003288)	FAM76B (ENSCSAG00000003286)	CEP57 (ENSCSAG00000003283)	MTMR2 (ENSCSAG00000003280)
Rhinopithecus	ANCESTRAL SPECIES	244																ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919.e #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078.a	ENSGT00940000154883.g.a.b	ENSGT00940000154883.g.a.a	ENSGT01030000234592.B	ENSGT00910000147059
Black snub-nosed monkey	MODERN SPECIES	695																IZUMO1R (ENSRBIG00000034661) #22	GPR83 (ENSRBIG00000043352) #23	MRE11 (ENSRBIG00000034693) #24	ANKRD49 (ENSRBIG00000043961) #25	ENSRBIG00000026350	C11orf97 (ENSRBIG00000041747) #26	PIWIL4 (ENSRBIG00000039745) #28	AMOTL1 (ENSRBIG00000043234)	CWC15 (ENSRBIG00000030781)	KDM4D (ENSRBIG00000029429)	KDM4E (ENSRBIG00000035068)	ENSRBIG00000023300	ENSRBIG00000036245	ENSRBIG00000041837	ENDOD1 (ENSRBIG00000025792)	ENSRBIG00000027014
Golden snub-nosed monkey	MODERN SPECIES	893																IZUMO1R (ENSRROG00000015988) #22	GPR83 (ENSRROG00000032634) #23	MRE11 (ENSRROG00000040618) #24	ANKRD49 (ENSRROG00000039528) #25	ENSRROG00000024575	ENSRROG00000019465	C11orf97 (ENSRROG00000036633) #26	FUT4 (ENSRROG00000001932) #27	PIWIL4 (ENSRROG00000015073) #28	AMOTL1 (ENSRROG00000044690)	CWC15 (ENSRROG00000037199)	KDM4D (ENSRROG00000015943)	KDM4E (ENSRROG00000031931)
Hominoidea	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.s.a.a.a.a #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00390000013073.a	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919.e #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078.a	ENSGT00940000154883.g.a.b	ENSGT00940000165078.b	ENSGT00940000154883.g.a.a	ENSGT01030000234592.B
Hominidae	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.s.a.a.a.a #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00390000013073.a	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919.e #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078.a	ENSGT00940000154883.g.a.b	ENSGT00940000165078.b	ENSGT00940000154883.g.a.a	ENSGT01030000234592.B	ENSGT00950000183168.A
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00940000154174.s.a.a.a.a #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00390000013073.a	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00390000018018.sb.a.b	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919.e #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078.a	ENSGT00940000154883.g.a.b	ENSGT00940000165078.b	ENSGT00940000154883.g.a.a	ENSGT01030000234592.B	ENSGT00950000183168.A
Gorilla	MODERN SPECIES	2	CHORDC1 (ENSGGOG00000027396) #9	FAT3 (ENSGGOG00000017065) #10	MTNR1B (ENSGGOG00000013924) #11	SLC36A4 (ENSGGOG00000028079) #12	DEUP1 (ENSGGOG00000016147) #13	SMCO4 (ENSGGOG00000011166) #14	ENSGGOG00000008382	CEP295 (ENSGGOG00000009396) #15	TAF1D (ENSGGOG00000028407) #16	C11orf54 (ENSGGOG00000014705) #17	MED17 (ENSGGOG00000010401) #18	VSTM5 (ENSGGOG00000010409) #19	HEPHL1 (ENSGGOG00000000624) #20	PANX (ENSGGOG00000005596) #21	ENSGGOG00000037261	IZUMO1R (ENSGGOG00000014840) #22	GPR83 (ENSGGOG00000007694) #23	MRE11 (ENSGGOG00000008192) #24	ANKRD49 (ENSGGOG00000008207) #25	C11orf97 (ENSGGOG00000036219) #26	PIWIL4 (ENSGGOG00000016276) #28	AMOTL1 (ENSGGOG00000001033)	CWC15 (ENSGGOG00000011926)	KDM4D (ENSGGOG00000010102)	SRSF8 (ENSGGOG00000022679)	ENDOD1 (ENSGGOG00000024775)	SESN3 (ENSGGOG00000004922)	FAM76B (ENSGGOG00000013409)	CEP57 (ENSGGOG00000013416)	MTMR2 (ENSGGOG00000010339)	MAML2 (ENSGGOG00000024120)
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.s.a.a.a.a #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00390000018018.sb.a.b	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919.e #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078.a	ENSGT00940000154883.g.a.b	ENSGT00940000165078.b	ENSGT00940000154883.g.a.a	ENSGT01030000234592.B	ENSGT00950000183168.A
Pan	ANCESTRAL SPECIES	1	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00390000008496.db.b	ENSGT00390000013073.a	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00390000018018.sb.a.b	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.c #24	ENSGT00390000003919.e #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT00940000165078.a	ENSGT00940000154883.g.a.b	ENSGT00940000165078.b	ENSGT00940000154883.g.a.a	ENSGT01030000234592.B	ENSGT00950000183168.A
Chimpanzee	MODERN SPECIES	2	SLC36A4 (ENSPTRG00000004171) #12	ENSPTRG00000043441	ENSPTRG00000043610	DEUP1 (ENSPTRG00000004172) #13	SMCO4 (ENSPTRG00000046135) #14	ENSPTRG00000045360	ENSPTRG00000048746	CEP295 (ENSPTRG00000004175) #15	TAF1D (ENSPTRG00000032462) #16	C11H11orf54 (ENSPTRG00000004177) #17	MED17 (ENSPTRG00000004178) #18	VSTM5 (ENSPTRG00000052018) #19	HEPHL1 (ENSPTRG00000004180) #20	PANX1 (ENSPTRG00000004181) #21	ENSPTRG00000044783	IZUMO1R (ENSPTRG00000004182) #22	GPR83 (ENSPTRG00000004183) #23	MRE11 (ENSPTRG00000004184) #24	ANKRD49 (ENSPTRG00000004185) #25	C11H11orf97 (ENSPTRG00000047025) #26	FUT4 (ENSPTRG00000028425) #27	PIWIL4 (ENSPTRG00000004187) #28	AMOTL1 (ENSPTRG00000004188)	CWC15 (ENSPTRG00000044239)	KDM4D (ENSPTRG00000004190)	KDM4E (ENSPTRG00000041826)	ENSPTRG00000043643	KDM4F (ENSPTRG00000044159)	SRSF8 (ENSPTRG00000046909)	ENDOD1 (ENSPTRG00000045007)	SESN3 (ENSPTRG00000004192)
Bonobo	MODERN SPECIES	2	ENSPPAG00000039538	SLC36A4 (ENSPPAG00000038875) #12	ENSPPAG00000043411	DEUP1 (ENSPPAG00000028857) #13	SMCO4 (ENSPPAG00000016913) #14	ENSPPAG00000037680	ENSPPAG00000000088	CEP295 (ENSPPAG00000041025) #15	TAF1D (ENSPPAG00000034322) #16	C11orf54 (ENSPPAG00000038203) #17	MED17 (ENSPPAG00000038273) #18	VSTM5 (ENSPPAG00000037419) #19	HEPHL1 (ENSPPAG00000040046) #20	PANX1 (ENSPPAG00000040074) #21	ENSPPAG00000026114	IZUMO1R (ENSPPAG00000041423) #22	GPR83 (ENSPPAG00000039550) #23	MRE11 (ENSPPAG00000034731) #24	ANKRD49 (ENSPPAG00000037946) #25	C11orf97 (ENSPPAG00000031103) #26	FUT4 (ENSPPAG00000021481) #27	PIWIL4 (ENSPPAG00000031181) #28	AMOTL1 (ENSPPAG00000036699)	CWC15 (ENSPPAG00000033609)	KDM4E (ENSPPAG00000022047)	ENSPPAG00000033651	ENDOD1 (ENSPPAG00000036031)	SESN3 (ENSPPAG00000027541)	FAM76B (ENSPPAG00000033075)	ENSPPAG00000024555	MTMR2 (ENSPPAG00000042525)
Human	MODERN SPECIES	2	NAALAD2 (ENSG00000077616) #8	CHORDC1 (ENSG00000110172) #9	FAT3 (ENSG00000165323) #10	MTNR1B (ENSG00000134640) #11	SLC36A4 (ENSG00000180773) #12	DEUP1 (ENSG00000165325) #13	SMCO4 (ENSG00000166002) #14	CEP295 (ENSG00000166004) #15	TAF1D (ENSG00000166012) #16	C11orf54 (ENSG00000182919) #17	ENSG00000284057	MED17 (ENSG00000042429) #18	VSTM5 (ENSG00000214376) #19	HEPHL1 (ENSG00000181333) #20	PANX1 (ENSG00000110218) #21	IZUMO1R (ENSG00000183560) #22	GPR83 (ENSG00000123901) #23	MRE11 (ENSG00000020922) #24	ANKRD49 (ENSG00000168876) #25	C11orf97 (ENSG00000257057) #26	PIWIL4 (ENSG00000134627) #28	FUT4 (ENSG00000196371) #27	AMOTL1 (ENSG00000166025)	CWC15 (ENSG00000150316)	KDM4D (ENSG00000186280)	KDM4E (ENSG00000235268)	KDM4F (ENSG00000255855)	SRSF8 (ENSG00000263465)	ENDOD1 (ENSG00000149218)	SESN3 (ENSG00000149212)	FAM76B (ENSG00000077458)
Orangutan	MODERN SPECIES	2	ENSPPYG00000039594 #7	ENSPPYG00000036793 #7	NAALAD2 (ENSPPYG00000003763) #8	CHORDC1 (ENSPPYG00000003764) #9	FAT3 (ENSPPYG00000003767) #10	MTNR1B (ENSPPYG00000003768) #11	SLC36A4 (ENSPPYG00000003769) #12	DEUP1 (ENSPPYG00000003770) #13	CEP295 (ENSPPYG00000003773) #15	TAF1D (ENSPPYG00000003774) #16	C11orf54 (ENSPPYG00000003775) #17	MED17 (ENSPPYG00000003776) #18	VSTM5 (ENSPPYG00000003777) #19	HEPHL1 (ENSPPYG00000003778) #20	PANX1 (ENSPPYG00000003779) #21	IZUMO1R (ENSPPYG00000003780) #22	GPR83 (ENSPPYG00000041687) #23	MRE11 (ENSPPYG00000037469) #24	ENSPPYG00000041706	ENSPPYG00000029760 #26	FUT4 (ENSPPYG00000037042) #27	PIWIL4 (ENSPPYG00000003783) #28	AMOTL1 (ENSPPYG00000003784)	CWC15 (ENSPPYG00000003785)	KDM4E (ENSPPYG00000041335)	KDM4F (ENSPPYG00000037461)	SRSF8 (ENSPPYG00000035224)	ENDOD1 (ENSPPYG00000040533)	SESN3 (ENSPPYG00000003788)	FAM76B (ENSPPYG00000003789)	CEP57 (ENSPPYG00000003790)
Gibbon	MODERN SPECIES	5	ENSNLEG00000028688	FAT3 (ENSNLEG00000007081) #10	ENSNLEG00000027382 #11	SLC36A4 (ENSNLEG00000028135) #12	DEUP1 (ENSNLEG00000007089) #13	SMCO4 (ENSNLEG00000027353) #14	ENSNLEG00000030226	CEP295 (ENSNLEG00000007093) #15	C11orf54 (ENSNLEG00000007095) #17	TAF1D (ENSNLEG00000007094) #16	MED17 (ENSNLEG00000007096) #18	VSTM5 (ENSNLEG00000007101) #19	HEPHL1 (ENSNLEG00000007103) #20	PANX1 (ENSNLEG00000007105) #21	ENSNLEG00000007107	IZUMO1R (ENSNLEG00000007108) #22	GPR83 (ENSNLEG00000007109) #23	MRE11 (ENSNLEG00000007111) #24	ANKRD49 (ENSNLEG00000007115) #25	ENSNLEG00000033459	C11orf97 (ENSNLEG00000007117) #26	ENSNLEG00000007118 #27	PIWIL4 (ENSNLEG00000007119) #28	AMOTL1 (ENSNLEG00000007120)	CWC15 (ENSNLEG00000031455)	KDM4D (ENSNLEG00000019232)	ENSNLEG00000035015	KDM4E (ENSNLEG00000007125)	ENSNLEG00000031658	ENDOD1 (ENSNLEG00000007127)	ENSNLEG00000035714
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT01030000234598.b.a.b.k.a ##8	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Lemuriformes	ANCESTRAL SPECIES	13	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Mouse lemur	MODERN SPECIES	27	ENSMICG00000013580	NAALAD2 (ENSMICG00000015630) #8	ENSMICG00000015646 #9	ENSMICG00000031389 #10	MTNR1B (ENSMICG00000043189) #11	SLC36A4 (ENSMICG00000033063) #12	DEUP1 (ENSMICG00000017876) #13	SMCO4 (ENSMICG00000017877) #14	CEP295 (ENSMICG00000017878) #15	TAF1D (ENSMICG00000034947) #16	C11orf54 (ENSMICG00000028510) #17	ENSMICG00000014697 #18	VSTM5 (ENSMICG00000045625) #19	HEPHL1 (ENSMICG00000006401) #20	PANX1 (ENSMICG00000006408) #21	IZUMO1R (ENSMICG00000031112) #22	GPR83 (ENSMICG00000028902) #23	ENSMICG00000027455 #24	ANKRD49 (ENSMICG00000013505) #25	C11orf97 (ENSMICG00000043866) #26	FUT4 (ENSMICG00000043071) #27	PIWIL4 (ENSMICG00000006375) #28	ENSMICG00000041717	AMOTL1 (ENSMICG00000001878)	ENSMICG00000036230 #9	CWC15 (ENSMICG00000042790)	SESN3 (ENSMICG00000008178)	FAM76B (ENSMICG00000036906)	CEP57 (ENSMICG00000030559)	MTMR2 (ENSMICG00000009395)	MAML2 (ENSMICG00000009400)
Lemuriformes_a	ANCESTRAL SPECIES	147			ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000164415	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152.a	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Greater bamboo lemur	MODERN SPECIES	414	ENSPSMG00000021720	FAT3 (ENSPSMG00000021711) #10	MTNR1B (ENSPSMG00000021687) #11	SLC36A4 (ENSPSMG00000021672) #12	DEUP1 (ENSPSMG00000021664) #13	SMCO4 (ENSPSMG00000021635) #14	CEP295 (ENSPSMG00000021623) #15	TAF1D (ENSPSMG00000021588) #16	C11orf54 (ENSPSMG00000021573) #17	MED17 (ENSPSMG00000021504) #18	VSTM5 (ENSPSMG00000021436) #19	ENSPSMG00000021429	ENSPSMG00000021414	HEPHL1 (ENSPSMG00000021408) #20	PANX1 (ENSPSMG00000021384) #21	IZUMO1R (ENSPSMG00000021373) #22	GPR83 (ENSPSMG00000021362) #23	ENSPSMG00000021347	MRE11 (ENSPSMG00000021306) #24	ANKRD49 (ENSPSMG00000021206) #25	C11orf97 (ENSPSMG00000021201) #26	FUT4 (ENSPSMG00000021197) #27	PIWIL4 (ENSPSMG00000021185) #28	AMOTL1 (ENSPSMG00000021101)	CWC15 (ENSPSMG00000021030)	ENSPSMG00000021017	ENSPSMG00000021012	ENDOD1 (ENSPSMG00000021004)	SESN3 (ENSPSMG00000020961)	FAM76B (ENSPSMG00000020859)	CEP57 (ENSPSMG00000020838)
Coquerels sifaka	MODERN SPECIES	801	MAB21L2 (ENSPCOG00000009351)	ENSPCOG00000018069	ENSPCOG00000027849	SH3D19 (ENSPCOG00000027680)	ENSPCOG00000027843	ENSPCOG00000027945	ENSPCOG00000011844	FHIP1A (ENSPCOG00000023440)	GATB (ENSPCOG00000021777)	VSTM5 (ENSPCOG00000025355) #19	ENSPCOG00000016651	ENSPCOG00000024602	HEPHL1 (ENSPCOG00000024694) #20	ENSPCOG00000024084	PANX1 (ENSPCOG00000014659) #21	IZUMO1R (ENSPCOG00000020918) #22	GPR83 (ENSPCOG00000022870) #23	MRE11 (ENSPCOG00000015583) #24	ANKRD49 (ENSPCOG00000022576) #25	C11orf97 (ENSPCOG00000019915) #26	PIWIL4 (ENSPCOG00000022264) #28	AMOTL1 (ENSPCOG00000024699)	CWC15 (ENSPCOG00000023913)	KDM4D (ENSPCOG00000024679)	ENDOD1 (ENSPCOG00000008619)	SESN3 (ENSPCOG00000017878)	ENSPCOG00000017746	FAM76B (ENSPCOG00000016586)	CEP57 (ENSPCOG00000019585)	MTMR2 (ENSPCOG00000011333)	MAML2 (ENSPCOG00000028333)
Bushbaby	MODERN SPECIES	116	FAT3 (ENSOGAG00000033165) #10	MTNR1B (ENSOGAG00000031018) #11	SLC36A4 (ENSOGAG00000006967) #12	DEUP1 (ENSOGAG00000007123) #13	SMCO4 (ENSOGAG00000016748) #14	CEP295 (ENSOGAG00000002516) #15	ENSOGAG00000002521 #16	C11orf54 (ENSOGAG00000002523) #17	MED17 (ENSOGAG00000002525) #18	VSTM5 (ENSOGAG00000030661) #19	ENSOGAG00000026605	ENSOGAG00000033509	ENSOGAG00000034157	HEPHL1 (ENSOGAG00000015952) #20	PANX1 (ENSOGAG00000015294) #21	IZUMO1R (ENSOGAG00000002522) #22	GPR83 (ENSOGAG00000002520) #23	MRE11 (ENSOGAG00000012154) #24	ANKRD49 (ENSOGAG00000012155) #25	C11orf97 (ENSOGAG00000033264) #26	FUT4 (ENSOGAG00000025107) #27	PIWIL4 (ENSOGAG00000012156) #28	AMOTL1 (ENSOGAG00000003989)	CWC15 (ENSOGAG00000001686)	KDM4D (ENSOGAG00000032607)	DYNC2H1 (ENSOGAG00000033838)	DCUN1D5 (ENSOGAG00000010225)	MMP13 (ENSOGAG00000010224)	MMP12 (ENSOGAG00000010221)	MMP3 (ENSOGAG00000010220)	MMP1 (ENSOGAG00000010215)
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.a ##8	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT01010000223591
Glires	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.a ##8	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT01010000223591
Rodentia	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT01010000223591
Rodentia_B	ANCESTRAL SPECIES	23	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Myomorpha	ANCESTRAL SPECIES	23	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Muroidea	ANCESTRAL SPECIES	29	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Muroidea_A	ANCESTRAL SPECIES	23	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00950000183005.b.c.b	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214.m #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Cricetinae	ANCESTRAL SPECIES	45		ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214.m #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Chinese hamster chok1gshd	MODERN SPECIES	310	Chordc1 (ENSCGRG00001004673) #9	ENSCGRG00001007587	Fat3 (ENSCGRG00001016740) #10	Mtnr1b (ENSCGRG00001017947) #11	Slc36a4 (ENSCGRG00001005789) #12	Deup1 (ENSCGRG00001012085) #13	Smco4 (ENSCGRG00001013247) #14	ENSCGRG00001018019	Cep295 (ENSCGRG00001000538) #15	Taf1d (ENSCGRG00001004962) #16	4931406C07Rik (ENSCGRG00001008949) #17	MED17 (ENSCGRG00001017473) #18	Vstm5 (ENSCGRG00001006156) #19	Hephl1 (ENSCGRG00001014172) #20	PANX (ENSCGRG00001016361) #21	Izumo1r (ENSCGRG00001016589) #22	Gpr83 (ENSCGRG00001018677) #23	Mre11a (ENSCGRG00001006581) #24	Ankrd49 (ENSCGRG00001014107) #25	1700012B09Rik (ENSCGRG00001015499) #26	Fut4 (ENSCGRG00001013612) #27	Piwil4 (ENSCGRG00001017873) #28	Amotl1 (ENSCGRG00001011579)	Cwc15 (ENSCGRG00001013337)	Kdm4d (ENSCGRG00001013157)
Golden Hamster	MODERN SPECIES	778			Naalad2 (ENSMAUG00000008805) #8	Chordc1 (ENSMAUG00000012157) #9	Fat3 (ENSMAUG00000007614) #10	Slc36a4 (ENSMAUG00000001281) #12	Deup1 (ENSMAUG00000001957) #13	Smco4 (ENSMAUG00000000425) #14	Taf1d (ENSMAUG00000002515) #16	4931406C07Rik (ENSMAUG00000000356) #17	Med17 (ENSMAUG00000000493) #18	Vstm5 (ENSMAUG00000000333) #19	Hephl1 (ENSMAUG00000017278) #20	ENSMAUG00000015499 #21	ENSMAUG00000015032	Izumo1r (ENSMAUG00000018564) #22	Gpr83 (ENSMAUG00000017943) #23	ENSMAUG00000016290 #24	Ankrd49 (ENSMAUG00000014988) #25	1700012B09Rik (ENSMAUG00000014010) #26	ENSMAUG00000015824	Fut4 (ENSMAUG00000015849) #27	Piwil4 (ENSMAUG00000011382) #28	Amotl1 (ENSMAUG00000012162)	Cwc15 (ENSMAUG00000011686)	Kdm4d (ENSMAUG00000010975)	Endod1 (ENSMAUG00000010649)	Sesn3 (ENSMAUG00000009718)
Cricetidae_B	ANCESTRAL SPECIES	61	ENSGT00950000183005.b.c.b	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214.m #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152
Northern American deer mouse	MODERN SPECIES	20	Chordc1 (ENSPEMG00000030600) #9	ENSPEMG00000031155	Fat3 (ENSPEMG00000013197) #10	Mtnr1b (ENSPEMG00000000316) #11	Slc36a4 (ENSPEMG00000023886) #12	Deup1 (ENSPEMG00000016493) #13	Smco4 (ENSPEMG00000027427) #14	Cep295 (ENSPEMG00000023772) #15	Taf1d (ENSPEMG00000023691) #16	4931406C07Rik (ENSPEMG00000023421) #17	Med17 (ENSPEMG00000024047) #18	Vstm5 (ENSPEMG00000028348) #19	ENSPEMG00000002357	Hephl1 (ENSPEMG00000021631) #20	Panx1 (ENSPEMG00000010979) #21	Izumo1r (ENSPEMG00000021678) #22	Gpr83 (ENSPEMG00000022377) #23	ENSPEMG00000030623	Mre11a (ENSPEMG00000023250) #24	1700012B09Rik (ENSPEMG00000012698) #26	ENSPEMG00000025171 #27	Piwil4 (ENSPEMG00000023859) #28	Amotl1 (ENSPEMG00000021905)	Cwc15 (ENSPEMG00000021432)	Kdm4d (ENSPEMG00000001845)	Alkbh8 (ENSPEMG00000022020)	Cwf19l2 (ENSPEMG00000022399)	Gucy1a2 (ENSPEMG00000021986)	ENSPEMG00000025699	Aasdhppt (ENSPEMG00000016551)	Kbtbd3 (ENSPEMG00000029070)
Prairie vole	MODERN SPECIES	204												Hephl1 (ENSMOCG00000002936) #20	ENSMOCG00000018402 #21	ENSMOCG00000012579	ENSMOCG00000010783	Izumo1r (ENSMOCG00000012181) #22	Gpr83 (ENSMOCG00000008157) #23	ENSMOCG00000011442 #24	Ankrd49 (ENSMOCG00000000210) #25	1700012B09Rik (ENSMOCG00000020476) #26	Fut4 (ENSMOCG00000012642) #27	Piwil4 (ENSMOCG00000020261) #28	Amotl1 (ENSMOCG00000014408)	Cwc15 (ENSMOCG00000016094)	Kdm4d (ENSMOCG00000008583)
Murinae	ANCESTRAL SPECIES	3	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Mus	ANCESTRAL SPECIES	4	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Mouse	MODERN SPECIES	18	Ubtfl1 (ENSMUSG00000074502)	Naalad2 (ENSMUSG00000043943) #8	Chordc1 (ENSMUSG00000001774) #9	Fat3 (ENSMUSG00000074505) #10	Mtnr1b (ENSMUSG00000050901) #11	Slc36a4 (ENSMUSG00000043885) #12	Deup1 (ENSMUSG00000039977) #13	Smco4 (ENSMUSG00000058173) #14	Cep295 (ENSMUSG00000046111) #15	Taf1d (ENSMUSG00000031939) #16	4931406C07Rik (ENSMUSG00000031938) #17	Med17 (ENSMUSG00000031935) #18	Vstm5 (ENSMUSG00000031937) #19	Hephl1 (ENSMUSG00000031936) #20	Panx1 (ENSMUSG00000031934) #21	Izumo1r (ENSMUSG00000031933) #22	Gpr83 (ENSMUSG00000031932) #23	Mre11a (ENSMUSG00000031928) #24	Ankrd49 (ENSMUSG00000031931) #25	1700012B09Rik (ENSMUSG00000031927) #26	Fut4 (ENSMUSG00000049307) #27	Piwil4 (ENSMUSG00000036912) #28	Amotl1 (ENSMUSG00000013076)	Cwc15 (ENSMUSG00000004096)	Kdm4d (ENSMUSG00000053914)	Endod1 (ENSMUSG00000037419)	Sesn3 (ENSMUSG00000032009)	Fam76b (ENSMUSG00000037808)	Cep57 (ENSMUSG00000031922)	Mtmr2 (ENSMUSG00000031918)	Gm17571 (ENSMUSG00000090592)
Mus_C	ANCESTRAL SPECIES	8	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000153052.c.b.b.b.d.a.a	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
spretus	MODERN SPECIES	18	Ubtfl1 (MGP_SPRETEiJ_G0032925)	Naalad2 (MGP_SPRETEiJ_G0032924) #8	Chordc1 (MGP_SPRETEiJ_G0032923) #9	MGP_SPRETEiJ_G0032922	Fat3 (MGP_SPRETEiJ_G0032921) #10	MGP_SPRETEiJ_G0032920 #11	Slc36a4 (MGP_SPRETEiJ_G0032919) #12	Deup1 (MGP_SPRETEiJ_G0032918) #13	Smco4 (MGP_SPRETEiJ_G0032917) #14	Cep295 (MGP_SPRETEiJ_G0032916) #15	4931406C07Rik (MGP_SPRETEiJ_G0032915) #17	Med17 (MGP_SPRETEiJ_G0032914) #18	Vstm5 (MGP_SPRETEiJ_G0032913) #19	Hephl1 (MGP_SPRETEiJ_G0032912) #20	Panx1 (MGP_SPRETEiJ_G0032911) #21	Izumo1r (MGP_SPRETEiJ_G0032910) #22	MGP_SPRETEiJ_G0032909 #23	Mre11a (MGP_SPRETEiJ_G0032908) #24	Ankrd49 (MGP_SPRETEiJ_G0032907) #25	1700012B09Rik (MGP_SPRETEiJ_G0032906) #26	Fut4 (MGP_SPRETEiJ_G0032905) #27	Piwil4 (MGP_SPRETEiJ_G0032904) #28	Amotl1 (MGP_SPRETEiJ_G0032903)	Cwc15 (MGP_SPRETEiJ_G0032902)	Kdm4d (MGP_SPRETEiJ_G0032901)	Endod1 (MGP_SPRETEiJ_G0032900)	Sesn3 (MGP_SPRETEiJ_G0032899)	Fam76b (MGP_SPRETEiJ_G0032898)	Cep57 (MGP_SPRETEiJ_G0032897)	Mtmr2 (MGP_SPRETEiJ_G0032896)	Maml2 (MGP_SPRETEiJ_G0032895)
Steppe mouse	MODERN SPECIES	3318	ENSMSIG00000015167	ENSMSIG00000015180	ENSMSIG00000015183	Fat3 (ENSMSIG00000015207) #10	Mtnr1b (ENSMSIG00000015621) #11	Slc36a4 (ENSMSIG00000015623) #12	Deup1 (ENSMSIG00000015751) #13	ENSMSIG00000015880 #14	Cep295 (ENSMSIG00000015917) #15	Taf1d (ENSMSIG00000016165) #16	4931406C07Rik (ENSMSIG00000016204) #17	Med17 (ENSMSIG00000016253) #18	Vstm5 (ENSMSIG00000016281) #19	Hephl1 (ENSMSIG00000016306) #20	Panx1 (ENSMSIG00000016343) #21	Izumo1r (ENSMSIG00000016359) #22	Gpr83 (ENSMSIG00000016567) #23	ENSMSIG00000016588	Mre11a (ENSMSIG00000016606) #24	Ankrd49 (ENSMSIG00000016701) #25	1700012B09Rik (ENSMSIG00000016716) #26	Fut4 (ENSMSIG00000016738) #27	Piwil4 (ENSMSIG00000016745) #28	Amotl1 (ENSMSIG00000016862)	Cwc15 (ENSMSIG00000017024)	ENSMSIG00000017048	Sesn3 (ENSMSIG00000017068)
Ryukyu mouse	MODERN SPECIES	18	Ubtfl1 (MGP_CAROLIEiJ_G0031805)	Naalad2 (MGP_CAROLIEiJ_G0031804) #8	Chordc1 (MGP_CAROLIEiJ_G0031803) #9	Fat3 (MGP_CAROLIEiJ_G0031802) #10	Mtnr1b (MGP_CAROLIEiJ_G0031801) #11	Slc36a4 (MGP_CAROLIEiJ_G0031800) #12	Deup1 (MGP_CAROLIEiJ_G0031799) #13	Smco4 (MGP_CAROLIEiJ_G0031798) #14	Cep295 (MGP_CAROLIEiJ_G0031797) #15	Taf1d (MGP_CAROLIEiJ_G0031796) #16	4931406C07Rik (MGP_CAROLIEiJ_G0031795) #17	Med17 (MGP_CAROLIEiJ_G0031794) #18	Vstm5 (MGP_CAROLIEiJ_G0031793) #19	Hephl1 (MGP_CAROLIEiJ_G0031792) #20	Panx1 (MGP_CAROLIEiJ_G0031791) #21	Izumo1r (MGP_CAROLIEiJ_G0031790) #22	Gpr83 (MGP_CAROLIEiJ_G0031789) #23	Mre11a (MGP_CAROLIEiJ_G0031788) #24	Ankrd49 (MGP_CAROLIEiJ_G0031787) #25	1700012B09Rik (MGP_CAROLIEiJ_G0031786) #26	Fut4 (MGP_CAROLIEiJ_G0031785) #27	Piwil4 (MGP_CAROLIEiJ_G0031784) #28	Amotl1 (MGP_CAROLIEiJ_G0031783)	Cwc15 (MGP_CAROLIEiJ_G0031782)	Kdm4d (MGP_CAROLIEiJ_G0031781)	Endod1 (MGP_CAROLIEiJ_G0031780)	Sesn3 (MGP_CAROLIEiJ_G0031779)	Fam76b (MGP_CAROLIEiJ_G0031778)	Cep57 (MGP_CAROLIEiJ_G0031777)	Mtmr2 (MGP_CAROLIEiJ_G0031776)	Maml2 (MGP_CAROLIEiJ_G0031775)
Shrew mouse	MODERN SPECIES	1	Ubtfl1 (MGP_PahariEiJ_G0014681)	MGP_PahariEiJ_G0014680	Chordc1 (MGP_PahariEiJ_G0014679) #9	Fat3 (MGP_PahariEiJ_G0014678) #10	Mtnr1b (MGP_PahariEiJ_G0014677) #11	Slc36a4 (MGP_PahariEiJ_G0014676) #12	Deup1 (MGP_PahariEiJ_G0014675) #13	Smco4 (MGP_PahariEiJ_G0014674) #14	Cep295 (MGP_PahariEiJ_G0014673) #15	MGP_PahariEiJ_G0014672 #16	4931406C07Rik (MGP_PahariEiJ_G0014671) #17	Med17 (MGP_PahariEiJ_G0014670) #18	Vstm5 (MGP_PahariEiJ_G0014669) #19	MGP_PahariEiJ_G0014668 #20	Panx1 (MGP_PahariEiJ_G0014667) #21	Izumo1r (MGP_PahariEiJ_G0014666) #22	Gpr83 (MGP_PahariEiJ_G0014665) #23	Mre11a (MGP_PahariEiJ_G0014664) #24	Ankrd49 (MGP_PahariEiJ_G0014663) #25	1700012B09Rik (MGP_PahariEiJ_G0014662) #26	Fut4 (MGP_PahariEiJ_G0014661) #27	Piwil4 (MGP_PahariEiJ_G0014660) #28	Amotl1 (MGP_PahariEiJ_G0014659)	Cwc15 (MGP_PahariEiJ_G0014658)	Kdm4d (MGP_PahariEiJ_G0014657)	Endod1 (MGP_PahariEiJ_G0014656)	Sesn3 (MGP_PahariEiJ_G0014655)	Fam76b (MGP_PahariEiJ_G0014654)	Cep57 (MGP_PahariEiJ_G0014653)	Mtmr2 (MGP_PahariEiJ_G0014652)	Maml2 (MGP_PahariEiJ_G0014651)
Rat	MODERN SPECIES	18	Nek2l1 (ENSRNOG00000012119)	LOC689840 (ENSRNOG00000031522)	Fat3 (ENSRNOG00000011585) #10	Mtnr1b (ENSRNOG00000008972) #11	Slc36a4 (ENSRNOG00000011455) #12	Deup1 (ENSRNOG00000061247) #13	Smco4 (ENSRNOG00000011162) #14	Cep295 (ENSRNOG00000010999) #15	Taf1d (ENSRNOG00000010921) #16	C8h11orf54 (ENSRNOG00000010887) #17	Med17 (ENSRNOG00000010496) #18	Vstm5 (ENSRNOG00000010480) #19	ENSRNOG00000062992	Hephl1 (ENSRNOG00000056092) #20	Panx1 (ENSRNOG00000010060) #21	Izumo1r (ENSRNOG00000019894) #22	Gpr83 (ENSRNOG00000030318) #23	Mre11 (ENSRNOG00000009506) #24	Ankrd49 (ENSRNOG00000009233) #25	C8h11orf97 (ENSRNOG00000009203) #26	Fut4 (ENSRNOG00000009157) #27	Piwil4 (ENSRNOG00000009043) #28	Amotl1 (ENSRNOG00000008990)	Cwc15 (ENSRNOG00000008490)	LOC108348070 (ENSRNOG00000045905)	Endod1 (ENSRNOG00000024757)	Sesn3 (ENSRNOG00000008173)	Fam76b (ENSRNOG00000024863)	Cep57 (ENSRNOG00000006792)	Mtmr2 (ENSRNOG00000005923)	Maml2 (ENSRNOG00000005879)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1827							Deup1 (ENSNGAG00000015010) #13	Smco4 (ENSNGAG00000019710) #14	Cep295 (ENSNGAG00000020811) #15	4931406C07Rik (ENSNGAG00000019210) #17	Med17 (ENSNGAG00000005765) #18	Vstm5 (ENSNGAG00000008846) #19	Hephl1 (ENSNGAG00000012499) #20	ENSNGAG00000004656	Panx1 (ENSNGAG00000014760) #21	Izumo1r (ENSNGAG00000009610) #22	Gpr83 (ENSNGAG00000015036) #23	Mre11a (ENSNGAG00000010330) #24	Ankrd49 (ENSNGAG00000012789) #25	1700012B09Rik (ENSNGAG00000013078) #26	Piwil4 (ENSNGAG00000022297) #28	Amotl1 (ENSNGAG00000012913)	Cwc15 (ENSNGAG00000016450)	Kdm4d (ENSNGAG00000019223)	Endod1 (ENSNGAG00000019861)	Sesn3 (ENSNGAG00000007814)
Lesser Egyptian jerboa	MODERN SPECIES	87	Cyfip1 (ENSJJAG00000018373)	Tubgcp5 (ENSJJAG00000018158)	Naalad2 (ENSJJAG00000016701) #8	Chordc1 (ENSJJAG00000015757) #9	ENSJJAG00000011242	ENSJJAG00000010000	ENSJJAG00000000974	ENSJJAG00000024255	Fat3 (ENSJJAG00000018504) #10	Deup1 (ENSJJAG00000000219) #13	Smco4 (ENSJJAG00000000940) #14	Cep295 (ENSJJAG00000001043) #15	Vstm5 (ENSJJAG00000019443) #19	Hephl1 (ENSJJAG00000015710) #20	Panx1 (ENSJJAG00000024378) #21	Izumo1r (ENSJJAG00000018637) #22	Mre11a (ENSJJAG00000009794) #24	Ankrd49 (ENSJJAG00000023374) #25	1700012B09Rik (ENSJJAG00000020782) #26	Fut4 (ENSJJAG00000015747) #27	ENSJJAG00000002783	Amotl1 (ENSJJAG00000000834)	ENSJJAG00000016968	ENSJJAG00000015656	Sesn3 (ENSJJAG00000019262)	Fam76b (ENSJJAG00000017450)	Cep57 (ENSJJAG00000013938)	Mtmr2 (ENSJJAG00000009913)	ENSJJAG00000002824	Ccdc82 (ENSJJAG00000017966)	Jrkl (ENSJJAG00000000663)
Kangaroo rat	MODERN SPECIES	433					Fat3 (ENSDORG00000024314) #10	Mtnr1b (ENSDORG00000026210) #11	ENSDORG00000002749	Slc36a4 (ENSDORG00000027198) #12	Deup1 (ENSDORG00000011685) #13	Smco4 (ENSDORG00000001107) #14	4931406C07Rik (ENSDORG00000005004) #17	Med17 (ENSDORG00000005005) #18	Vstm5 (ENSDORG00000004620) #19	Hephl1 (ENSDORG00000005176) #20	ENSDORG00000028004	Izumo1r (ENSDORG00000005007) #22	Gpr83 (ENSDORG00000004374) #23	ENSDORG00000004828 #24	Iws1 (ENSDORG00000007385)	Myo7b (ENSDORG00000015044)	Gpr17 (ENSDORG00000015052)	Lims2 (ENSDORG00000015051)	Wdr33 (ENSDORG00000023513)	Polr2d (ENSDORG00000026897)	Ammecr1l (ENSDORG00000028104)	Sap130 (ENSDORG00000015563)	Uggt1 (ENSDORG00000003315)	Hs6st1 (ENSDORG00000028206)	ENSDORG00000026180	ENSDORG00000026195	Fam168b (ENSDORG00000015352)
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.f #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT01010000223591
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000163419	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.f #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152.g.a	ENSGT00940000162152.g.b	ENSGT00940000162152.h	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a
Marmotini	ANCESTRAL SPECIES	20	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.f #9	ENSGT00940000178162	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152.g.a	ENSGT00940000162152.g.b	ENSGT00940000162152.h	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a
Alpin marmot	MODERN SPECIES	25	CHORDC1 (ENSMMMG00000004692) #9	ENSMMMG00000004674	ENSMMMG00000004671	FAT3 (ENSMMMG00000004600) #10	MTNR1B (ENSMMMG00000004580) #11	SLC36A4 (ENSMMMG00000004555) #12	DEUP1 (ENSMMMG00000004469) #13	SMCO4 (ENSMMMG00000004447) #14	CEP295 (ENSMMMG00000004214) #15	TAF1D (ENSMMMG00000004115) #16	C11orf54 (ENSMMMG00000004067) #17	MED17 (ENSMMMG00000004045) #18	VSTM5 (ENSMMMG00000004034) #19	HEPHL1 (ENSMMMG00000003995) #20	PANX1 (ENSMMMG00000003980) #21	IZUMO1R (ENSMMMG00000003960) #22	GPR83 (ENSMMMG00000003939) #23	MRE11 (ENSMMMG00000003822) #24	ANKRD49 (ENSMMMG00000003801) #25	C11orf97 (ENSMMMG00000003791) #26	FUT4 (ENSMMMG00000003775) #27	PIWIL4 (ENSMMMG00000003741) #28	AMOTL1 (ENSMMMG00000003717)	CWC15 (ENSMMMG00000003695)	ENSMMMG00000003692	ENSMMMG00000003680	ENSMMMG00000003674	ENSMMMG00000003662	ENDOD1 (ENSMMMG00000003657)	SESN3 (ENSMMMG00000003584)	ENSMMMG00000003554
Marmotini_b	ANCESTRAL SPECIES	155			ENSGT00940000178162	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152.g.a	ENSGT00940000162152.g.b	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a
Squirrel	MODERN SPECIES	274		FAT3 (ENSSTOG00000008783) #10	MTNR1B (ENSSTOG00000008849) #11	SLC36A4 (ENSSTOG00000008854) #12	DEUP1 (ENSSTOG00000011722) #13	SMCO4 (ENSSTOG00000008008) #14	CEP295 (ENSSTOG00000008015) #15	TAF1D (ENSSTOG00000030516) #16	C11orf54 (ENSSTOG00000008061) #17	MED17 (ENSSTOG00000008098) #18	VSTM5 (ENSSTOG00000025751) #19	ENSSTOG00000033997	HEPHL1 (ENSSTOG00000026323) #20	PANX1 (ENSSTOG00000006851) #21	ENSSTOG00000032468	IZUMO1R (ENSSTOG00000032389) #22	GPR83 (ENSSTOG00000006859) #23	MRE11 (ENSSTOG00000006869) #24	ANKRD49 (ENSSTOG00000028263) #25	C11orf97 (ENSSTOG00000032509) #26	FUT4 (ENSSTOG00000006910) #27	ENSSTOG00000006932 #28	AMOTL1 (ENSSTOG00000002462)	CWC15 (ENSSTOG00000002485)	KDM4D (ENSSTOG00000021726)
Arctic ground squirrel	MODERN SPECIES	166			ENSUPAG00010000873	FAT3 (ENSUPAG00010000879) #10	MTNR1B (ENSUPAG00010000937) #11	SLC36A4 (ENSUPAG00010000949) #12	DEUP1 (ENSUPAG00010000984) #13	CEP295 (ENSUPAG00010001137) #15	TAF1D (ENSUPAG00010001478) #16	C11orf54 (ENSUPAG00010001486) #17	MED17 (ENSUPAG00010001622) #18	VSTM5 (ENSUPAG00010001672) #19	HEPHL1 (ENSUPAG00010001691) #20	PANX1 (ENSUPAG00010001730) #21	ENSUPAG00010001744	IZUMO1R (ENSUPAG00010001756) #22	GPR83 (ENSUPAG00010001763) #23	MRE11 (ENSUPAG00010001790) #24	ANKRD49 (ENSUPAG00010001896) #25	C11orf97 (ENSUPAG00010001935) #26	FUT4 (ENSUPAG00010001953) #27	PIWIL4 (ENSUPAG00010001982) #28	AMOTL1 (ENSUPAG00010002044)	CWC15 (ENSUPAG00010002076)	KDM4D (ENSUPAG00010002086)	ENDOD1 (ENSUPAG00010002099)	SESN3 (ENSUPAG00010002105)	ENSUPAG00010002123	ENSUPAG00010002131
Eurasian red squirrel	MODERN SPECIES	2	NAALAD2 (ENSSVLG00005023397) #8	ENSSVLG00005023505 #9	FAT3 (ENSSVLG00005023682) #10	MTNR1B (ENSSVLG00005023956) #11	SLC36A4 (ENSSVLG00005023972) #12	ENSSVLG00005024017	DEUP1 (ENSSVLG00005024034) #13	SMCO4 (ENSSVLG00005024149) #14	CEP295 (ENSSVLG00005024179) #15	TAF1D (ENSSVLG00005008868) #16	C11orf54 (ENSSVLG00005008945) #17	MED17 (ENSSVLG00005009035) #18	VSTM5 (ENSSVLG00005009102) #19	HEPHL1 (ENSSVLG00005009168) #20	PANX1 (ENSSVLG00005009275) #21	IZUMO1R (ENSSVLG00005009300) #22	GPR83 (ENSSVLG00005009337) #23	MRE11 (ENSSVLG00005009395) #24	ENSSVLG00005009454	ANKRD49 (ENSSVLG00005009488) #25	C11orf97 (ENSSVLG00005009503) #26	FUT4 (ENSSVLG00005009540) #27	PIWIL4 (ENSSVLG00005009583) #28	AMOTL1 (ENSSVLG00005009738)	CWC15 (ENSSVLG00005009802)	KDM4D (ENSSVLG00005009838)	ENSSVLG00005009855	ENDOD1 (ENSSVLG00005009881)	SESN3 (ENSSVLG00005009932)	ENSSVLG00005010116	CEP57 (ENSSVLG00005010241)
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.f #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084.u	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT01010000223591
Hystricomorpha_a	ANCESTRAL SPECIES	10	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.f #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084.u	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Hystricomorpha_b	ANCESTRAL SPECIES	5	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174.f #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00940000169594	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25
Long-tailed chinchilla	MODERN SPECIES	121	NAALAD2 (ENSCLAG00000012474) #8	ENSCLAG00000014963 #9	FAT3 (ENSCLAG00000013669) #10	ENSCLAG00000012677	MTNR1B (ENSCLAG00000012055) #11	SLC36A4 (ENSCLAG00000015872) #12	DEUP1 (ENSCLAG00000013832) #13	SMCO4 (ENSCLAG00000011932) #14	CEP295 (ENSCLAG00000014683) #15	TAF1D (ENSCLAG00000014698) #16	C11orf54 (ENSCLAG00000017272) #17	MED17 (ENSCLAG00000017202) #18	VSTM5 (ENSCLAG00000016423) #19	HEPHL1 (ENSCLAG00000015721) #20	PANX1 (ENSCLAG00000014612) #21	IZUMO1R (ENSCLAG00000015110) #22	ENSCLAG00000013252	GPR83 (ENSCLAG00000013629) #23	ENSCLAG00000013392 #24	ANKRD49 (ENSCLAG00000015054) #25
Degu	MODERN SPECIES	250	ENSODEG00000018835	ENSODEG00000002534	FAT3 (ENSODEG00000002606) #10	MTNR1B (ENSODEG00000002125) #11	SLC36A4 (ENSODEG00000002145) #12	DEUP1 (ENSODEG00000002198) #13	SMCO4 (ENSODEG00000018804) #14	TAF1D (ENSODEG00000002225) #16	C11orf54 (ENSODEG00000002265) #17	MED17 (ENSODEG00000002353) #18	VSTM5 (ENSODEG00000002406) #19	ENSODEG00000002422	HEPHL1 (ENSODEG00000002492) #20	ENSODEG00000000644 #21	ENSODEG00000000623	IZUMO1R (ENSODEG00000000695) #22	GPR83 (ENSODEG00000000724) #23	ENSODEG00000001221 #25	ENSODEG00000001233
Guinea pig	MODERN SPECIES	40	FOLH1 (ENSCPOG00000003797) ##8	NAALAD2 (ENSCPOG00000038440) #8	CHORDC1 (ENSCPOG00000022614) #9	ENSCPOG00000010626 #10	MTNR1B (ENSCPOG00000010637) #11	SLC36A4 (ENSCPOG00000036098) #12	DEUP1 (ENSCPOG00000011016) #13	SMCO4 (ENSCPOG00000032286) #14	CEP295 (ENSCPOG00000032006) #15	TAF1D (ENSCPOG00000002426) #16	C11orf54 (ENSCPOG00000014146) #17	MED17 (ENSCPOG00000014149) #18	VSTM5 (ENSCPOG00000024881) #19	HEPHL1 (ENSCPOG00000004098) #20	PANX1 (ENSCPOG00000039148) #21	IZUMO1R (ENSCPOG00000011657) #22	GPR83 (ENSCPOG00000039200) #23	MRE11 (ENSCPOG00000014563) #24	ANKRD49 (ENSCPOG00000030391) #25	C11orf97 (ENSCPOG00000031459) #26	FUT4 (ENSCPOG00000000069) #27	PIWIL4 (ENSCPOG00000000070) #28	AMOTL1 (ENSCPOG00000006241)	CWC15 (ENSCPOG00000006249)	KDM4D (ENSCPOG00000006256)
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000050821	FAT3 (ENSHGLG00000010388) #10	ENSHGLG00000044735 #11	SLC36A4 (ENSHGLG00000044885) #12	ENSHGLG00000020910	ENSHGLG00000014481 #15	C11orf54 (ENSHGLG00000012597) #17	TAF1D (ENSHGLG00000008795) #16	MED17 (ENSHGLG00000006191) #18	VSTM5 (ENSHGLG00000007424) #19	ENSHGLG00000048701	ENSHGLG00000049421	HEPHL1 (ENSHGLG00000005416) #20	PANX1 (ENSHGLG00000007682) #21	ENSHGLG00000050118	IZUMO1R (ENSHGLG00000008985) #22	ENSHGLG00000019637	GPR83 (ENSHGLG00000018711) #23	MRE11A (ENSHGLG00000015754) #24	ANKRD49 (ENSHGLG00000014039) #25	ENSHGLG00000014136 #26	FUT4 (ENSHGLG00000005608) #27	ENSHGLG00000005671	PIWIL4 (ENSHGLG00000007416) #28	ENSHGLG00000008729	AMOTL1 (ENSHGLG00000010959)	ENSHGLG00000049265	ENSHGLG00000035638	ENSHGLG00000032452	ENSHGLG00000043269	ENSHGLG00000046281 #14
Lagomorpha	ANCESTRAL SPECIES	5	ENSGT01030000234598.b.a.b.k.a ##8	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Rabbit	MODERN SPECIES		NAALAD2 (ENSOCUG00000014137) #8	ENSOCUG00000014147 #9	ENSOCUG00000023399	FAT3 (ENSOCUG00000007427) #10	MTNR1B (ENSOCUG00000008196) #11	SLC36A4 (ENSOCUG00000000649) #12	DEUP1 (ENSOCUG00000000199) #13	CEP295 (ENSOCUG00000029678) #15	ENSOCUG00000001096 #16	C11orf54 (ENSOCUG00000012810) #17	MED17 (ENSOCUG00000012818) #18	VSTM5 (ENSOCUG00000026554) #19	ENSOCUG00000029520	HEPHL1 (ENSOCUG00000009466) #20	PANX1 (ENSOCUG00000009473) #21	IZUMO1R (ENSOCUG00000013431) #22	GPR83 (ENSOCUG00000015502) #23	MRE11 (ENSOCUG00000014899) #24	ANKRD49 (ENSOCUG00000014912) #25	ENSOCUG00000033194	C11orf97 (ENSOCUG00000034472) #26	FUT4 (ENSOCUG00000014204) #27	PIWIL4 (ENSOCUG00000002860) #28	AMOTL1 (ENSOCUG00000001078)	CWC15 (ENSOCUG00000001629)	ENSOCUG00000001631	ENSOCUG00000032220	ENSOCUG00000031183	ENSOCUG00000035381	ENSOCUG00000038702	ENDOD1 (ENSOCUG00000014040)
Pika	MODERN SPECIES	3956																ENSOPRG00000004158 #22	ENSOPRG00000004178 #23	MRE11 (ENSOPRG00000004190) #24	ENSOPRG00000004229	ENSOPRG00000004245 #28
Tree shrew	MODERN SPECIES	4448																IZUMO1R (ENSTBEG00000006316) #22	GPR83 (ENSTBEG00000006734) #23
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162741.i.b	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000183144.A.j #22
Common shrew	MODERN SPECIES	7854																ENSSARG00000005246 #22
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162741.i.b	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162741.i.b	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Suina	ANCESTRAL SPECIES	5	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162741.i.b	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Pig	MODERN SPECIES	17	CHORDC1 (ENSSSCG00000014934) #9	ENSSSCG00000014935 #10	ENSSSCG00000034113	MTNR1B (ENSSSCG00000014939) #11	SLC36A4 (ENSSSCG00000024933) #12	DEUP1 (ENSSSCG00000014943) #13	SMCO4 (ENSSSCG00000057259) #14	CEP295 (ENSSSCG00000014946) #15	TAF1D (ENSSSCG00000038682) #16	C11orf54 (ENSSSCG00000014948) #17	MED17 (ENSSSCG00000014949) #18	VSTM5 (ENSSSCG00000014950) #19	ENSSSCG00000041237	HEPHL1 (ENSSSCG00000030461) #20	PANX1 (ENSSSCG00000032360) #21	IZUMO1R (ENSSSCG00000014952) #22	GPR83 (ENSSSCG00000022490) #23	MRE11 (ENSSSCG00000014955) #24	ANKRD49 (ENSSSCG00000014956) #25	C11orf97 (ENSSSCG00000014957) #26	ENSSSCG00000062029 #27	PIWIL4 (ENSSSCG00000014959) #28	AMOTL1 (ENSSSCG00000014960)	CWC15 (ENSSSCG00000014961)	ENSSSCG00000031376	ENSSSCG00000034794	ENSSSCG00000036400	ENSSSCG00000057084	ENSSSCG00000057445	ENSSSCG00000054911	ENDOD1 (ENSSSCG00000014965)
Chacoan peccary	MODERN SPECIES	30	TRIM77 (ENSCWAG00000002794)	NAALAD2 (ENSCWAG00000002648) #8	CHORDC1 (ENSCWAG00000002615) #9	FAT3 (ENSCWAG00000002509) #10	MTNR1B (ENSCWAG00000002467) #11	SLC36A4 (ENSCWAG00000002448) #12	DEUP1 (ENSCWAG00000002415) #13	ENSCWAG00000002405 #14	CEP295 (ENSCWAG00000002365) #15	TAF1D (ENSCWAG00000002303) #16	C11orf54 (ENSCWAG00000002241) #17	MED17 (ENSCWAG00000002193) #18	VSTM5 (ENSCWAG00000002173) #19	HEPHL1 (ENSCWAG00000002145) #20	PANX1 (ENSCWAG00000002126) #21	IZUMO1R (ENSCWAG00000002109) #22	GPR83 (ENSCWAG00000002075) #23	NACA2 (ENSCWAG00000002065)	MRE11 (ENSCWAG00000002025) #24	ANKRD49 (ENSCWAG00000002004) #25	ENSCWAG00000001993 #26	ENSCWAG00000001987 #27	PIWIL4 (ENSCWAG00000001925) #28	AMOTL1 (ENSCWAG00000001874)	CWC15 (ENSCWAG00000001851)	ENSCWAG00000001839	KDM4D (ENSCWAG00000001831)	ENDOD1 (ENSCWAG00000001818)	SESN3 (ENSCWAG00000001788)	FAM76B (ENSCWAG00000001765)	CEP57 (ENSCWAG00000001747)
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162741.i.b	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Camelidae	ANCESTRAL SPECIES	32	ENSGT00940000163858	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214.o #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Arabian camel	MODERN SPECIES	1	NAALAD2 (ENSCDRG00005011284) #8	CHORDC1 (ENSCDRG00005011505) #9	FAT3 (ENSCDRG00005011626) #10	MTNR1B (ENSCDRG00005011909) #11	SLC36A4 (ENSCDRG00005011954) #12	DEUP1 (ENSCDRG00005012090) #13	ENSCDRG00005012157 #14	ENSCDRG00005012255 #15	TAF1D (ENSCDRG00005013529) #16	ENSCDRG00005013599 #17	MED17 (ENSCDRG00005014246) #18	VSTM5 (ENSCDRG00005014480) #19	ENSCDRG00005014573	HEPHL1 (ENSCDRG00005014678) #20	PANX1 (ENSCDRG00005014832) #21	IZUMO1R (ENSCDRG00005014865) #22	GPR83 (ENSCDRG00005014899) #23	MRE11 (ENSCDRG00005014968) #24	ANKRD49 (ENSCDRG00005015366) #25	C11orf97 (ENSCDRG00005015394) #26	FUT4 (ENSCDRG00005015443) #27	PIWIL4 (ENSCDRG00005015533) #28	AMOTL1 (ENSCDRG00005015718)	CWC15 (ENSCDRG00005015943)	ENSCDRG00005015979	ENSCDRG00005016007	ENSCDRG00005016090	SESN3 (ENSCDRG00005016152)	FAM76B (ENSCDRG00005016457)	CEP57 (ENSCDRG00005016540)	MTMR2 (ENSCDRG00005016764)
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162741.i.b	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Pecora	ANCESTRAL SPECIES	7																ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.b #24	ENSGT00390000003919 #25	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b	ENSGT00940000159114	ENSGT00940000161497	ENSGT00950000182999.a.b	ENSGT00940000159575	ENSGT00940000154620	ENSGT00940000156155	ENSGT00940000157450	ENSGT00940000162085
Yarkand deer	MODERN SPECIES																	IZUMO1R (ENSCHYG00000000006) #22	GPR83 (ENSCHYG00000000012) #23	MRE11 (ENSCHYG00000000023) #24	ANKRD49 (ENSCHYG00000000041) #25	ENSCHYG00000000056	KBTBD3 (ENSCHYG00000000060)	MSANTD4 (ENSCHYG00000000065)	GRIA4 (ENSCHYG00000000113)	ENSCHYG00000000131	ENSCHYG00000000171	ENSCHYG00000000211	ENSCHYG00000000233	PDGFD (ENSCHYG00000000341)	DDI1 (ENSCHYG00000000457)	DYNC2H1 (ENSCHYG00000000537)	DCUN1D5 (ENSCHYG00000000628)
Percora_a	ANCESTRAL SPECIES	6																ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.b #24	ENSGT00390000003919 #25	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b	ENSGT00940000159114	ENSGT00940000161497	ENSGT00950000182999.a.b	ENSGT00940000159575	ENSGT00940000154620	ENSGT00940000156155	ENSGT00940000157450	ENSGT00940000162085
Bovidae	ANCESTRAL SPECIES	6												ENSGT00940000162608.b.b.a.a.b	ENSGT00940000154976.p.a	ENSGT00940000154261.q.b.a.a	ENSGT00940000154976.p.b.b	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.b #24	ENSGT00390000003919 #25	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b	ENSGT00940000159114	ENSGT00940000161497	ENSGT00940000171276	ENSGT00950000182999.a.b	ENSGT00940000159575	ENSGT00940000154620	ENSGT00940000156155	ENSGT00940000157450
Bovinae	ANCESTRAL SPECIES	21					ENSGT01100000263503.E.d.a.a.b.b.l	ENSGT01100000263503.E.d.b	ENSGT00940000154970.e.a.a.a.a.a	ENSGT00940000154976.p.a	ENSGT00940000154261.q.b.b.a	ENSGT00940000154261.q.b.a.a	ENSGT00940000154970.e.a.a.b.a	ENSGT00940000154261.q.b.a.b.c	ENSGT00940000154976.p.b.b	ENSGT00900000141017.c.b.b	ENSGT00940000158647.g.a.c	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.b #24	ENSGT00390000003919 #25	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b	ENSGT00940000159114	ENSGT00940000161497	ENSGT00940000171276	ENSGT00950000182999.a.b	ENSGT00940000159575	ENSGT00940000154620	ENSGT00940000156155	ENSGT00940000157450
Bos	ANCESTRAL SPECIES	20			ENSGT01100000263503.E.c.a.a.a.m.a.b	ENSGT01100000263503.E.c.a.b.w	ENSGT00940000154333.b.b.a	ENSGT00940000159605.o.b.b.b.e.b.b.a	ENSGT00940000154970.e.b	ENSGT00940000158647.g.b	ENSGT00900000141017.d	ENSGT00940000154970.e.a.b	ENSGT00940000154261.q.b.a.a	ENSGT00940000154970.e.a.a.b.a	ENSGT00940000154261.q.b.a.b.c	ENSGT00940000154976.p.b.b	ENSGT00940000158647.g.a.c	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.b #24	ENSGT00390000003919 #25	ENSGT00390000004663.l	ENSGT00390000004663.k	ENSGT00940000158415.f	ENSGT00440000039469	ENSGT00940000155677.b	ENSGT00940000159114	ENSGT00940000161497	ENSGT00940000171276	ENSGT00940000163552.a.b.b.a	ENSGT00950000182999.a.b	ENSGT00940000159575	ENSGT00940000154620
Bos_b	ANCESTRAL SPECIES	19			ENSGT01100000263503.E.d.a.a.b.b.l	ENSGT01100000263503.E.d.b	ENSGT00940000162374.p.b	ENSGT00940000154261.q.a.a.a.c	ENSGT00940000162608.b.b.a.a.b	ENSGT00940000154970.e.a.a.a.a.a	ENSGT00940000154976.p.a	ENSGT00940000154261.q.b.b.a	ENSGT00940000154261.q.b.a.a	ENSGT00940000154970.e.a.a.b.a	ENSGT00940000154261.q.b.a.b.c	ENSGT00940000154976.p.b.b	ENSGT00940000158647.g.a.c	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.b #24	ENSGT00390000003919 #25	ENSGT00390000004663.l	ENSGT00390000004663.k	ENSGT00940000158415.f	ENSGT00440000039469	ENSGT00940000155677.b	ENSGT00940000174020.a.b	ENSGT00940000159114	ENSGT00940000161497	ENSGT00940000163552.a.b.b.a	ENSGT00950000182999.a.b	ENSGT00940000159575	ENSGT00940000154620
Cow	MODERN SPECIES	6			OR5M9 (ENSBTAG00000049790)	OR5M5 (ENSBTAG00000045558)	ENSBTAG00000052561	OR4C174 (ENSBTAG00000040008)	ENSBTAG00000049221	OR4C1I (ENSBTAG00000049795)	OR4A2H (ENSBTAG00000003930)	OR4C146 (ENSBTAG00000052871)	OR4C175 (ENSBTAG00000054290)	OR4C171P (ENSBTAG00000013156)	OR4C178 (ENSBTAG00000003023)	OR4C180 (ENSBTAG00000055028)	OR4C185 (ENSBTAG00000046387)	IZUMO1R (ENSBTAG00000050890) #22	GPR83 (ENSBTAG00000008923) #23	MRE11 (ENSBTAG00000008925) #24	ANKRD49 (ENSBTAG00000009176) #25	AASDHPPT (ENSBTAG00000012279)	KBTBD3 (ENSBTAG00000005392)	MSANTD4 (ENSBTAG00000023989)	GRIA4 (ENSBTAG00000006176)	ENSBTAG00000055258	CASP1 (ENSBTAG00000050239)	CASP4 (ENSBTAG00000020884)	ENSBTAG00000053811	ENSBTAG00000051613	ENSBTAG00000052675	PDGFD (ENSBTAG00000034827)	DDI1 (ENSBTAG00000002887)
Hybrid Bos Indicus	MODERN SPECIES	6								ENSBIXG00005014380	ENSBIXG00005005418	ENSBIXG00005014409	ENSBIXG00005014476	ENSBIXG00005014486	ENSBIXG00005001978	ENSBIXG00005014512	ENSBIXG00005014518	IZUMO1R (ENSBIXG00005014530) #22	ENSBIXG00005014538	MRE11 (ENSBIXG00005014792) #24	ANKRD49 (ENSBIXG00005014841) #25	ENSBIXG00005014848	AASDHPPT (ENSBIXG00005014858)	KBTBD3 (ENSBIXG00005014892)	MSANTD4 (ENSBIXG00005014916)	GRIA4 (ENSBIXG00005014996)	ENSBIXG00005015044	ENSBIXG00005002205	ENSBIXG00005015170	ENSBIXG00005015227	ENSBIXG00005005639	DDI1 (ENSBIXG00005015259)	PDGFD (ENSBIXG00005015295)
Bos_a	ANCESTRAL SPECIES																	ENSGT00950000183144.A.j #22
Domestic yak	MODERN SPECIES	4					ENSBGRG00000022310	ENSBGRG00000022300	ENSBGRG00000022287	ENSBGRG00000022274	ENSBGRG00000022261	ENSBGRG00000022206	ENSBGRG00000022083	ENSBGRG00000021998	ENSBGRG00000021986	ENSBGRG00000021939	ENSBGRG00000021894	IZUMO1R (ENSBGRG00000021756) #22	MRE11 (ENSBGRG00000021342) #24	ANKRD49 (ENSBGRG00000021288) #25	ENSBGRG00000021208	KBTBD3 (ENSBGRG00000021150)	MSANTD4 (ENSBGRG00000021125)	GRIA4 (ENSBGRG00000020983)	ENSBGRG00000020667	ENSBGRG00000020533	ENSBGRG00000020511	ENSBGRG00000020487	DDI1 (ENSBGRG00000020479)	PDGFD (ENSBGRG00000020375)	ENSBGRG00000020346	DYNC2H1 (ENSBGRG00000019097)	DCUN1D5 (ENSBGRG00000018907)
Wild yak	MODERN SPECIES	2061																IZUMO1R (ENSBMUG00000020597) #22
American bison	MODERN SPECIES	3269											ENSBBBG00000013904	ENSBBBG00000003013	ENSBBBG00000003007	ENSBBBG00000002991	ENSBBBG00000002987	IZUMO1R (ENSBBBG00000002977) #22	GPR83 (ENSBBBG00000013852) #23	MRE11 (ENSBBBG00000013835) #24	ANKRD49 (ENSBBBG00000013766) #25	AASDHPPT (ENSBBBG00000002944)	KBTBD3 (ENSBBBG00000002938)	MSANTD4 (ENSBBBG00000008502)	GRIA4 (ENSBBBG00000013733)
Caprinae	ANCESTRAL SPECIES	6										ENSGT01100000263503.E.d.a.a.b.b.l	ENSGT01100000263503.E.d.b	ENSGT00940000154970.e.b	ENSGT00940000163528	ENSGT00940000158647.g.b	ENSGT00940000154976.p.a	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288.b #24	ENSGT00390000003919 #25	ENSGT00390000004663	ENSGT00940000158415	ENSGT00440000039469	ENSGT00940000155677.b	ENSGT01030000234886	ENSGT00940000159114	ENSGT00940000161497	ENSGT00940000171276	ENSGT00950000182999.a.b	ENSGT00940000159575	ENSGT00940000154620	ENSGT00940000156155
Goat	MODERN SPECIES	6												ENSCHIG00000019565	OR4A15 (ENSCHIG00000020045)	ENSCHIG00000010849	ENSCHIG00000010035	IZUMO1R (ENSCHIG00000027008) #22	GPR83 (ENSCHIG00000011152) #23	MRE11 (ENSCHIG00000021669) #24	ANKRD49 (ENSCHIG00000015614) #25	AASDHPPT (ENSCHIG00000017726)	KBTBD3 (ENSCHIG00000012819)	ENSCHIG00000013896	MSANTD4 (ENSCHIG00000021603)	ENSCHIG00000022465	ENSCHIG00000019889	ENSCHIG00000009053	ENSCHIG00000020857	ENSCHIG00000013458	ENSCHIG00000023433	ENSCHIG00000008146	DDI1 (ENSCHIG00000007991)
Siberian musk deer	MODERN SPECIES	1172												ENSMMSG00000009911	ENSMMSG00000009899	ENSMMSG00000009864	ENSMMSG00000009805	IZUMO1R (ENSMMSG00000009745) #22	GPR83 (ENSMMSG00000009714) #23	ENSMMSG00000009157 #24	ANKRD49 (ENSMMSG00000009101) #25	AASDHPPT (ENSMMSG00000009083)	KBTBD3 (ENSMMSG00000009059)	ENSMMSG00000008975	GRIA4 (ENSMMSG00000008872)	ENSMMSG00000008496	ENSMMSG00000008366	DDI1 (ENSMMSG00000008336)	PDGFD (ENSMMSG00000008276)	ENSMMSG00000008237	ENSMMSG00000008228	ENSMMSG00000008190	DYNC2H1 (ENSMMSG00000020899)
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214.q.a #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152.n.a	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214.q.a #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152.n.a	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Sperm whale	MODERN SPECIES	7	FAT3 (ENSPCTG00005005410) #10	MTNR1B (ENSPCTG00005005362) #11	SLC36A4 (ENSPCTG00005005320) #12	DEUP1 (ENSPCTG00005005239) #13	ENSPCTG00005005223 #14	ENSPCTG00005005216 #14	CEP295 (ENSPCTG00005005109) #15	TAF1D (ENSPCTG00005004998) #16	C16H11orf54 (ENSPCTG00005004783) #17	MED17 (ENSPCTG00005004711) #18	VSTM5 (ENSPCTG00005004678) #19	ENSPCTG00005004592	ENSPCTG00005004559	HEPHL1 (ENSPCTG00005004530) #20	PANX1 (ENSPCTG00005004492) #21	IZUMO1R (ENSPCTG00005004480) #22	GPR83 (ENSPCTG00005004449) #23	ENSPCTG00005004432	MRE11 (ENSPCTG00005004248) #24	ANKRD49 (ENSPCTG00005012473) #25	C11orf97 (ENSPCTG00005012423) #26	FUT4 (ENSPCTG00005012401) #27	PIWIL4 (ENSPCTG00005012159) #28	AMOTL1 (ENSPCTG00005012114)	CWC15 (ENSPCTG00005012079)	ENSPCTG00005012039	ENSPCTG00005012004	ENSPCTG00005011937	ENDOD1 (ENSPCTG00005011905)	ENSPCTG00005011881	ENSPCTG00005011830
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000156185.s	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214.q.a #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084.w	ENSGT00940000162152.n.a	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a	ENSGT00390000004986
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000156185.s.a	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214.q.a #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000153309.d.g	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084.w	ENSGT00940000162152.n.a.b	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a	ENSGT00390000004986
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000156185.s.a	ENSGT00390000013276.r	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214.q.a #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000153309.d.g	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084.w	ENSGT00940000162152.n.a.b	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a	ENSGT00390000004986
Narwhal	MODERN SPECIES	314	CHORDC1 (ENSMMNG00015020880) #9	FAT3 (ENSMMNG00015020732) #10	MTNR1B (ENSMMNG00015020672) #11	SLC36A4 (ENSMMNG00015020630) #12	DEUP1 (ENSMMNG00015020581) #13	SMCO4 (ENSMMNG00015020556) #14	ENSMMNG00015020542	ENSMMNG00015020536	CEP295 (ENSMMNG00015020472) #15	TAF1D (ENSMMNG00015020380) #16	ENSMMNG00015020304 #17	MED17 (ENSMMNG00015020217) #18	VSTM5 (ENSMMNG00015020170) #19	HEPHL1 (ENSMMNG00015020099) #20	PANX1 (ENSMMNG00015020072) #21	IZUMO1R (ENSMMNG00015020047) #22	GPR83 (ENSMMNG00015020020) #23	MRE11 (ENSMMNG00015019911) #24	ANKRD49 (ENSMMNG00015019870) #25	FUT4 (ENSMMNG00015019851) #27	PIWIL4 (ENSMMNG00015019794) #28	AMOTL1 (ENSMMNG00015019700)	ENSMMNG00015019674	ENSMMNG00015019662	ENDOD1 (ENSMMNG00015019650)	SESN3 (ENSMMNG00015019600)	FAM76B (ENSMMNG00015019558)	CEP57 (ENSMMNG00015019470)	MTMR2 (ENSMMNG00015019396)	MAML2 (ENSMMNG00015019358)	CCDC82 (ENSMMNG00015019297)
Beluga whale	MODERN SPECIES	87	FAT3 (ENSDLEG00000010985) #10	MTNR1B (ENSDLEG00000010941) #11	SLC36A4 (ENSDLEG00000010919) #12	ENSDLEG00000010889 #13	SMCO4 (ENSDLEG00000010877) #14	ENSDLEG00000010859	ENSDLEG00000010853	CEP295 (ENSDLEG00000009788) #15	TAF1D (ENSDLEG00000009654) #16	ENSDLEG00000009480 #17	MED17 (ENSDLEG00000009424) #18	VSTM5 (ENSDLEG00000009404) #19	ENSDLEG00000009395	HEPHL1 (ENSDLEG00000009188) #20	PANX1 (ENSDLEG00000009144) #21	IZUMO1R (ENSDLEG00000008834) #22	GPR83 (ENSDLEG00000008769) #23	MRE11 (ENSDLEG00000008671) #24	ANKRD49 (ENSDLEG00000008640) #25	FUT4 (ENSDLEG00000008615) #27	PIWIL4 (ENSDLEG00000008525) #28	AMOTL1 (ENSDLEG00000008425)	CWC15 (ENSDLEG00000008381)	ENDOD1 (ENSDLEG00000008365)	SESN3 (ENSDLEG00000008313)	FAM76B (ENSDLEG00000008194)	CEP57 (ENSDLEG00000008152)	MTMR2 (ENSDLEG00000008099)	ENSDLEG00000019364	ENSDLEG00000019362	CCDC82 (ENSDLEG00000019354)
Vaquita	MODERN SPECIES	19	NAALAD2 (ENSPSNG00000015587) #8	CHORDC1 (ENSPSNG00000015361) #9	FAT3 (ENSPSNG00000015176) #10	MTNR1B (ENSPSNG00000014997) #11	SLC36A4 (ENSPSNG00000014913) #12	DEUP1 (ENSPSNG00000014794) #13	ENSPSNG00000014662	CEP295 (ENSPSNG00000014268) #15	ENSPSNG00000013981 #17	TAF1D (ENSPSNG00000013901) #16	MED17 (ENSPSNG00000013775) #18	VSTM5 (ENSPSNG00000013668) #19	ENSPSNG00000013594	HEPHL1 (ENSPSNG00000013322) #20	PANX1 (ENSPSNG00000013265) #21	IZUMO1R (ENSPSNG00000013201) #22	GPR83 (ENSPSNG00000013087) #23	MRE11 (ENSPSNG00000012783) #24	ANKRD49 (ENSPSNG00000012741) #25	ENSPSNG00000012714 #27	PIWIL4 (ENSPSNG00000012478) #28	AMOTL1 (ENSPSNG00000012299)	ENSPSNG00000012253	ENSPSNG00000012220	ENSPSNG00000012161	ENDOD1 (ENSPSNG00000012066)	SESN3 (ENSPSNG00000011827)	FAM76B (ENSPSNG00000011736)	CEP57 (ENSPSNG00000011486)	ENSPSNG00000011365	MAML2 (ENSPSNG00000011258)
Dolphin	MODERN SPECIES	6791																IZUMO1R (ENSTTRG00000007211) #22
Blue whale	MODERN SPECIES	19	ENSBMSG00010008607	FAT3 (ENSBMSG00010008516) #10	MTNR1B (ENSBMSG00010008461) #11	SLC36A4 (ENSBMSG00010008445) #12	DEUP1 (ENSBMSG00010008417) #13	SMCO4 (ENSBMSG00010008401) #14	ENSBMSG00010008389	CEP295 (ENSBMSG00010008344) #15	TAF1D (ENSBMSG00010008284) #16	ENSBMSG00010008251 #17	MED17 (ENSBMSG00010008219) #18	ENSBMSG00010008190	ENSBMSG00010008183	HEPHL1 (ENSBMSG00010008172) #20	PANX1 (ENSBMSG00010008164) #21	IZUMO1R (ENSBMSG00010008153) #22	GPR83 (ENSBMSG00010008125) #23	MRE11 (ENSBMSG00010008081) #24	ANKRD49 (ENSBMSG00010008053) #25	ENSBMSG00010008035	C11orf97 (ENSBMSG00010008028) #26	ENSBMSG00010008018 #27	ENSBMSG00010008013	ENSBMSG00010008011 #28	AMOTL1 (ENSBMSG00010007997)	CWC15 (ENSBMSG00010007991)	ENSBMSG00010007988	ENSBMSG00010007984	ENSBMSG00010007975	ENSBMSG00010007972	ENDOD1 (ENSBMSG00010007966)
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162741.i.b	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a
Carnivora	ANCESTRAL SPECIES	21	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162741.i.b	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00910000147289	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a
Felidae	ANCESTRAL SPECIES		ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162741.i.b	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152.s	ENSGT00940000162152.t	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a
Panthera	ANCESTRAL SPECIES	23	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162741.i.b	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084.y.b	ENSGT00940000162152.s	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Tiger	MODERN SPECIES	123	CHORDC1 (ENSPTIG00000017806) #9	ENSPTIG00000017905	ENSPTIG00000018013 #10	ENSPTIG00000018103 #10	MTNR1B (ENSPTIG00000018222) #11	SLC36A4 (ENSPTIG00000018252) #12	DEUP1 (ENSPTIG00000018347) #13	SMCO4 (ENSPTIG00000010019) #14	CEP295 (ENSPTIG00000018669) #15	TAF1D (ENSPTIG00000019674) #16	C11orf54 (ENSPTIG00000019745) #17	MED17 (ENSPTIG00000019841) #18	VSTM5 (ENSPTIG00000020099) #19	HEPHL1 (ENSPTIG00000020126) #20	PANX1 (ENSPTIG00000020245) #21	IZUMO1R (ENSPTIG00000020317) #22	GPR83 (ENSPTIG00000020384) #23	MRE11 (ENSPTIG00000020482) #24	ANKRD49 (ENSPTIG00000020842) #25	C11orf97 (ENSPTIG00000020857) #26	PIWIL4 (ENSPTIG00000020931) #28	AMOTL1 (ENSPTIG00000021027)	ENSPTIG00000021149	KDM4D (ENSPTIG00000021192)	ENDOD1 (ENSPTIG00000021253)	SESN3 (ENSPTIG00000000066)	FAM76B (ENSPTIG00000000581)	CEP57 (ENSPTIG00000002807)	MTMR2 (ENSPTIG00000005248)	MAML2 (ENSPTIG00000005913)	CCDC82 (ENSPTIG00000006366)
Panthera_a	ANCESTRAL SPECIES	24	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162741.i.b	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084.y.a.a	ENSGT00940000162152.s.a	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
lion	MODERN SPECIES	10	FAT3 (ENSPLOG00000013276) #10	ENSPLOG00000013143	MTNR1B (ENSPLOG00000013104) #11	ENSPLOG00000013078	SLC36A4 (ENSPLOG00000012924) #12	DEUP1 (ENSPLOG00000012693) #13	SMCO4 (ENSPLOG00000012661) #14	CEP295 (ENSPLOG00000012597) #15	TAF1D (ENSPLOG00000012430) #16	C11orf54 (ENSPLOG00000012138) #17	MED17 (ENSPLOG00000012011) #18	VSTM5 (ENSPLOG00000011932) #19	ENSPLOG00000011835	HEPHL1 (ENSPLOG00000011658) #20	PANX1 (ENSPLOG00000011611) #21	IZUMO1R (ENSPLOG00000011548) #22	GPR83 (ENSPLOG00000011474) #23	MRE11 (ENSPLOG00000011192) #24	ANKRD49 (ENSPLOG00000011102) #25	C11orf97 (ENSPLOG00000011026) #26	FUT4 (ENSPLOG00000010997) #27	PIWIL4 (ENSPLOG00000018141) #28	AMOTL1 (ENSPLOG00000017940)	ENSPLOG00000017871	KDM4D (ENSPLOG00000017815)	ENDOD1 (ENSPLOG00000017790)	SESN3 (ENSPLOG00000017658)	FAM76B (ENSPLOG00000017383)	CEP57 (ENSPLOG00000017062)	MTMR2 (ENSPLOG00000016998)	MAML2 (ENSPLOG00000016912)
leopard	MODERN SPECIES	17	CHORDC1 (ENSPPRG00000009494) #9	ENSPPRG00000008409	FAT3 (ENSPPRG00000007707) #10	ENSPPRG00000005678	MTNR1B (ENSPPRG00000004216) #11	SLC36A4 (ENSPPRG00000004146) #12	DEUP1 (ENSPPRG00000003992) #13	SMCO4 (ENSPPRG00000015134) #14	CEP295 (ENSPPRG00000002239) #15	TAF1D (ENSPPRG00000000132) #16	C11orf54 (ENSPPRG00000022726) #17	MED17 (ENSPPRG00000014853) #18	VSTM5 (ENSPPRG00000012542) #19	HEPHL1 (ENSPPRG00000012328) #20	PANX1 (ENSPPRG00000012085) #21	IZUMO1R (ENSPPRG00000011844) #22	GPR83 (ENSPPRG00000011279) #23	MRE11 (ENSPPRG00000010728) #24	ANKRD49 (ENSPPRG00000008157) #25	C11orf97 (ENSPPRG00000007748) #26	FUT4 (ENSPPRG00000014970) #27	PIWIL4 (ENSPPRG00000007432) #28	AMOTL1 (ENSPPRG00000007186)	ENSPPRG00000005063	ENSPPRG00000014918	ENSPPRG00000014906	ENSPPRG00000014900	ENSPPRG00000004151	ENSPPRG00000004139	SESN3 (ENSPPRG00000003990)	FAM76B (ENSPPRG00000003510)
Cat	MODERN SPECIES	241	ENSFCAG00000037392	NAALAD2 (ENSFCAG00000025290) #8	CHORDC1 (ENSFCAG00000019389) #9	FAT3 (ENSFCAG00000022245) #10	ENSFCAG00000030530	MTNR1B (ENSFCAG00000003193) #11	SLC36A4 (ENSFCAG00000029109) #12	DEUP1 (ENSFCAG00000006337) #13	CEP295 (ENSFCAG00000028136) #15	TAF1D (ENSFCAG00000012473) #16	CD1H11orf54 (ENSFCAG00000012474) #17	MED17 (ENSFCAG00000012475) #18	VSTM5 (ENSFCAG00000023848) #19	HEPHL1 (ENSFCAG00000014735) #20	PANX1 (ENSFCAG00000004470) #21	IZUMO1R (ENSFCAG00000003023) #22	GPR83 (ENSFCAG00000010910) #23	MRE11 (ENSFCAG00000025219) #24	ANKRD49 (ENSFCAG00000042246) #25	CD1H11orf97 (ENSFCAG00000036846) #26	FUT4 (ENSFCAG00000029438) #27	PIWIL4 (ENSFCAG00000010914) #28	AMOTL1 (ENSFCAG00000010915)	CWC15 (ENSFCAG00000007826)	ENSFCAG00000045743	ENSFCAG00000043892	ENDOD1 (ENSFCAG00000005079)	SESN3 (ENSFCAG00000005081)	FAM76B (ENSFCAG00000026051)	CEP57 (ENSFCAG00000025537)	MTMR2 (ENSFCAG00000030514)
Caniformia	ANCESTRAL SPECIES	17	ENSGT01030000234598.b.a.b.k.a ##8	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823.a #26	ENSGT00910000147289	ENSGT00520000058823.b #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a
Canidae	ANCESTRAL SPECIES	17	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00950000183152.A.w.a	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a.h #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061.i.a #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00910000147289	ENSGT00520000058823.b #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a
Canis_lupus	ANCESTRAL SPECIES	21	ENSGT00940000154174 #9	ENSGT00950000183152.A.w.a	ENSGT00940000153314.a.b.a	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a.h #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061.i.a #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00910000147289	ENSGT00520000058823.b #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152.y	ENSGT00940000162152.z	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000162213.a.a.c.a.a	ENSGT00940000159074
Dingo	MODERN SPECIES	245	ENSCAFG00020016674	ENSCAFG00020016670	ENSCAFG00020016668	FAT3 (ENSCAFG00020016652) #10	MTNR1B (ENSCAFG00020016646) #11	SLC36A4 (ENSCAFG00020016637) #12	ENSCAFG00020016631 #13	ENSCAFG00020016621 #13	SMCO4 (ENSCAFG00020016620) #14	CEP295 (ENSCAFG00020016598) #15	C11orf54 (ENSCAFG00020016576) #17	MED17 (ENSCAFG00020016574) #18	VSTM5 (ENSCAFG00020016572) #19	HEPHL1 (ENSCAFG00020016564) #20	PANX1 (ENSCAFG00020016561) #21	IZUMO1R (ENSCAFG00020016546) #22	GPR83 (ENSCAFG00020016538) #23	MRE11 (ENSCAFG00020016532) #24	ENSCAFG00020016530	ANKRD49 (ENSCAFG00020016528) #25	FUT4 (ENSCAFG00020016526) #27	PIWIL4 (ENSCAFG00020016521) #28	AMOTL1 (ENSCAFG00020016518)	CWC15 (ENSCAFG00020016515)	ENSCAFG00020016513	ENSCAFG00020016510	ENSCAFG00020016506	ENSCAFG00020016504	ENSCAFG00020016496	ENSCAFG00020016489	FAM76B (ENSCAFG00020016484)
Dog	MODERN SPECIES	13	ENSCAFG00845023968	ENSCAFG00845023937	ENSCAFG00845023311 #10	MTNR1B (ENSCAFG00845023202) #11	SLC36A4 (ENSCAFG00845023100) #12	ENSCAFG00845022822	SMCO4 (ENSCAFG00845022789) #14	DEUP1 (ENSCAFG00845022176) #13	CEP295 (ENSCAFG00845021425) #15	ENSCAFG00845021166 #16	C11orf54 (ENSCAFG00845020928) #17	MED17 (ENSCAFG00845020829) #18	ENSCAFG00845020781 #19	HEPHL1 (ENSCAFG00845020630) #20	PANX1 (ENSCAFG00845020558) #21	IZUMO1R (ENSCAFG00845020509) #22	GPR83 (ENSCAFG00845020430) #23	MRE11 (ENSCAFG00845020248) #24	ANKRD49 (ENSCAFG00845020201) #25	ENSCAFG00845020169	ENSCAFG00845020114 #26	FUT4 (ENSCAFG00845020086) #27	PIWIL4 (ENSCAFG00845019963) #28	AMOTL1 (ENSCAFG00845019406)	CWC15 (ENSCAFG00845019309)	ENSCAFG00845019286	ENSCAFG00845019240	ENDOD1 (ENSCAFG00845019180)	SESN3 (ENSCAFG00845018942)	ENSCAFG00845018846	FAM76B (ENSCAFG00845018160)
Red fox	MODERN SPECIES	12	CHORDC1 (ENSVVUG00000009574) #9	ENSVVUG00000009594	ENSVVUG00000009615	ENSVVUG00000009648	ENSVVUG00000009657	FAT3 (ENSVVUG00000009801) #10	SLC36A4 (ENSVVUG00000011262) #12	DEUP1 (ENSVVUG00000011271) #13	CEP295 (ENSVVUG00000011351) #15	CUNH11orf54 (ENSVVUG00000011455) #17	MED17 (ENSVVUG00000011459) #18	VSTM5 (ENSVVUG00000011473) #19	ENSVVUG00000011475	HEPHL1 (ENSVVUG00000011481) #20	PANX1 (ENSVVUG00000011503) #21	ENSVVUG00000011513 #22	GPR83 (ENSVVUG00000011530) #23	MRE11 (ENSVVUG00000011537) #24	ANKRD49 (ENSVVUG00000011561) #25	ENSVVUG00000011564	ENSVVUG00000011567 #26	FUT4 (ENSVVUG00000011573) #27	PIWIL4 (ENSVVUG00000011577) #28	AMOTL1 (ENSVVUG00000011602)	ENSVVUG00000011644	ENSVVUG00000011648	KDM4D (ENSVVUG00000011656)	ENDOD1 (ENSVVUG00000011659)	SESN3 (ENSVVUG00000011684)	FAM76B (ENSVVUG00000011705)	ENSVVUG00000011726
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT01030000234598.b.a.b.k.a ##8	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823.a #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Ursidae	ANCESTRAL SPECIES	15	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##8	ENSGT01030000234598.b.a.b.k.b.m #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823.a #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152.u	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Ursus	ANCESTRAL SPECIES	157			ENSGT01030000234598.b.a.b.k.b.m #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152.u.a.a	ENSGT00940000162152.u.b	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
American black bear	MODERN SPECIES	9237																IZUMO1R (ENSUAMG00000001677) #22
Polar bear	MODERN SPECIES	149	GLB1L2 (ENSUMAG00000006270)	B3GAT1 (ENSUMAG00000006581)	NAALAD2 (ENSUMAG00000006599) #8	CHORDC1 (ENSUMAG00000006613) #9	FAT3 (ENSUMAG00000006731) #10	SLC36A4 (ENSUMAG00000006788) #12	DEUP1 (ENSUMAG00000006791) #13	SMCO4 (ENSUMAG00000006807) #14	CEP295 (ENSUMAG00000006832) #15	TAF1D (ENSUMAG00000006891) #16	C11orf54 (ENSUMAG00000006893) #17	MED17 (ENSUMAG00000006899) #18	VSTM5 (ENSUMAG00000006903) #19	HEPHL1 (ENSUMAG00000006908) #20	PANX1 (ENSUMAG00000006930) #21	IZUMO1R (ENSUMAG00000006944) #22	GPR83 (ENSUMAG00000007059) #23	MRE11 (ENSUMAG00000007075) #24	ANKRD49 (ENSUMAG00000007092) #25	PIWIL4 (ENSUMAG00000007117) #28	AMOTL1 (ENSUMAG00000007154)	CWC15 (ENSUMAG00000007161)	ENSUMAG00000007170	ENSUMAG00000007175	ENDOD1 (ENSUMAG00000007178)	SESN3 (ENSUMAG00000007186)	FAM76B (ENSUMAG00000007226)	CEP57 (ENSUMAG00000007244)	MTMR2 (ENSUMAG00000007301)	ENSUMAG00000008078	ENSUMAG00000008084
Giant Panda	MODERN SPECIES	18	ENSAMEG00000005259 ##8	ENSAMEG00000007477 #8	ENSAMEG00000007577 #9	ENSAMEG00000028153 #9	FAT3 (ENSAMEG00000004298) #10	SLC36A4 (ENSAMEG00000015861) #12	DEUP1 (ENSAMEG00000015849) #13	SMCO4 (ENSAMEG00000020097) #14	CEP295 (ENSAMEG00000012848) #15	TAF1D (ENSAMEG00000012858) #16	C11orf54 (ENSAMEG00000012862) #17	MED17 (ENSAMEG00000012892) #18	VSTM5 (ENSAMEG00000023824) #19	HEPHL1 (ENSAMEG00000012916) #20	PANX1 (ENSAMEG00000011923) #21	IZUMO1R (ENSAMEG00000011928) #22	GPR83 (ENSAMEG00000007680) #23	MRE11 (ENSAMEG00000007626) #24	ANKRD49 (ENSAMEG00000028517) #25	C11orf97 (ENSAMEG00000024321) #26	FUT4 (ENSAMEG00000007616) #27	PIWIL4 (ENSAMEG00000007580) #28	ENSAMEG00000001911	AMOTL1 (ENSAMEG00000011381)	CWC15 (ENSAMEG00000011392)	ENSAMEG00000025796	ENSAMEG00000027198	ENDOD1 (ENSAMEG00000019907)	SESN3 (ENSAMEG00000011413)	FAM76B (ENSAMEG00000008044)	CEP57 (ENSAMEG00000008024)
Mustelinae	ANCESTRAL SPECIES	25	ENSGT01030000234598.b.a.b.k.a ##8	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A.e #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823.a #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
American mink	MODERN SPECIES	6	FOLH1 (ENSNVIG00000004536) ##8	NAALAD2 (ENSNVIG00000004661) #8	CHRD1 (ENSNVIG00000004738) #9	FAT3 (ENSNVIG00000004831) #10	MTNR1B (ENSNVIG00000004926) #11	SLC36A4 (ENSNVIG00000004976) #12	DEUP1 (ENSNVIG00000005001) #13	ENSNVIG00000005094 #14	CEP295 (ENSNVIG00000005105) #15	TAF1D (ENSNVIG00000005172) #16	C11orf54 (ENSNVIG00000005179) #17	MED17 (ENSNVIG00000005216) #18	VSTM5 (ENSNVIG00000005272) #19	HEPHL1 (ENSNVIG00000005290) #20	PANX1 (ENSNVIG00000005347) #21	FOLR4 (ENSNVIG00000005363) #22	GPR83 (ENSNVIG00000005397) #23	MRE11 (ENSNVIG00000005415) #24	ANKRD49 (ENSNVIG00000005521) #25	C11orf97 (ENSNVIG00000005537) #26	FUT4 (ENSNVIG00000005553) #27	PIWIL4 (ENSNVIG00000005560) #28	AMOTL1 (ENSNVIG00000005602)	CWC15 (ENSNVIG00000005664)	ENSNVIG00000005671	ENSNVIG00000005674	ENDOD1 (ENSNVIG00000005691)	SESN3 (ENSNVIG00000005698)	FAM76B (ENSNVIG00000005739)	CEP57 (ENSNVIG00000005774)	MTMR2 (ENSNVIG00000005888)
Ferret	MODERN SPECIES	207	PCOLCE2 (ENSMPUG00000011868)	TRPC1 (ENSMPUG00000011873)	PLS1 (ENSMPUG00000011881)	ATR (ENSMPUG00000012022)	XRN1 (ENSMPUG00000012040)	GK5 (ENSMPUG00000012150)	TFDP2 (ENSMPUG00000012159)	ATP1B3 (ENSMPUG00000012165)	GRK7 (ENSMPUG00000012168)	ENSMPUG00000012217	RNF7 (ENSMPUG00000012222)	RASA2 (ENSMPUG00000012228)	ZBTB38 (ENSMPUG00000019344)	HEPHL1 (ENSMPUG00000012234) #20	PANX1 (ENSMPUG00000012239) #21	IZUMO1R (ENSMPUG00000012242) #22	GPR83 (ENSMPUG00000012244) #23	MRE11 (ENSMPUG00000012250) #24	ANKRD49 (ENSMPUG00000012252) #25	ENSMPUG00000012255	FUT4 (ENSMPUG00000019345) #27	PIWIL4 (ENSMPUG00000012256) #28	AMOTL1 (ENSMPUG00000012261)	CWC15 (ENSMPUG00000012265)	KDM4D (ENSMPUG00000012267)	ENSMPUG00000012270	SESN3 (ENSMPUG00000012272)	ENSMPUG00000012279	FAM76B (ENSMPUG00000012280)	CEP57 (ENSMPUG00000012287)	MTMR2 (ENSMPUG00000012291)
Laurasiatheria_c	ANCESTRAL SPECIES	23														ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Chiroptera	ANCESTRAL SPECIES	33														ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Microchiroptera	ANCESTRAL SPECIES	34														ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Greater horseshoe bat	MODERN SPECIES	2	ENSRFEG00010018698 #9	ENSRFEG00010018842	FAT3 (ENSRFEG00010018861) #10	MTNR1B (ENSRFEG00010018917) #11	SLC36A4 (ENSRFEG00010018971) #12	DEUP1 (ENSRFEG00010019047) #13	ENSRFEG00010019320 #14	CEP295 (ENSRFEG00010019371) #15	TAF1D (ENSRFEG00010019531) #16	C11orf54 (ENSRFEG00010019588) #17	MED17 (ENSRFEG00010019676) #18	VSTM5 (ENSRFEG00010019719) #19	ENSRFEG00010019751	HEPHL1 (ENSRFEG00010019856) #20	PANX1 (ENSRFEG00010020003) #21	IZUMO1R (ENSRFEG00010020055) #22	GPR83 (ENSRFEG00010020113) #23	MRE11 (ENSRFEG00010020173) #24	ANKRD49 (ENSRFEG00010020343) #25	C11orf97 (ENSRFEG00010020369) #26	FUT4 (ENSRFEG00010020392) #27	PIWIL4 (ENSRFEG00010020425) #28	AMOTL1 (ENSRFEG00010020674)	CWC15 (ENSRFEG00010020742)	ENSRFEG00010020755	ENSRFEG00010020772	ENDOD1 (ENSRFEG00010020792)	SESN3 (ENSRFEG00010020812)	FAM76B (ENSRFEG00010020857)	CEP57 (ENSRFEG00010020926)	MTMR2 (ENSRFEG00010021018)
Microbat	MODERN SPECIES	1041	FAT3 (ENSMLUG00000015758) #10	MTNR1B (ENSMLUG00000011618) #11	ENSMLUG00000001084	SLC36A4 (ENSMLUG00000005983) #12	ENSMLUG00000030695	DEUP1 (ENSMLUG00000015504) #13	SMCO4 (ENSMLUG00000006975) #14	CEP295 (ENSMLUG00000011383) #15	ENSMLUG00000011431 #16	C11orf54 (ENSMLUG00000011443) #17	MED17 (ENSMLUG00000011467) #18	VSTM5 (ENSMLUG00000029725) #19	ENSMLUG00000022473	HEPHL1 (ENSMLUG00000008248) #20	PANX1 (ENSMLUG00000000460) #21	IZUMO1R (ENSMLUG00000000463) #22	GPR83 (ENSMLUG00000016975) #23	MRE11 (ENSMLUG00000002006) #24	ANKRD49 (ENSMLUG00000002017) #25	C11orf97 (ENSMLUG00000025421) #26	PIWIL4 (ENSMLUG00000002018) #28	AMOTL1 (ENSMLUG00000002026)	ENSMLUG00000002032	ENSMLUG00000028321	ENSMLUG00000025372	ENSMLUG00000026834	ENDOD1 (ENSMLUG00000014495)	SESN3 (ENSMLUG00000014498)	ENSMLUG00000027497	FAM76B (ENSMLUG00000013608)	CEP57 (ENSMLUG00000013618)
Megabat	MODERN SPECIES	4836																IZUMO1R (ENSPVAG00000002160) #22
Equus	ANCESTRAL SPECIES	25														ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152.`b	ENSGT00940000162152.ab	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a
Horse	MODERN SPECIES	28	ENSECAG00000049990	ENSECAG00000005999	FAT3 (ENSECAG00000001988) #10	ENSECAG00000022260	MTNR1B (ENSECAG00000022198) #11	SLC36A4 (ENSECAG00000021237) #12	DEUP1 (ENSECAG00000020231) #13	CEP295 (ENSECAG00000018114) #15	TAF1D (ENSECAG00000017850) #16	C7H11orf54 (ENSECAG00000015110) #17	MED17 (ENSECAG00000011329) #18	VSTM5 (ENSECAG00000011305) #19	ENSECAG00000011283	HEPHL1 (ENSECAG00000008947) #20	PANX1 (ENSECAG00000007780) #21	IZUMO1R (ENSECAG00000007254) #22	ENSECAG00000052866	MARCHF2 (ENSECAG00000025028)	HNRNPM (ENSECAG00000023868)	PRAM1 (ENSECAG00000023478)	ZNF414 (ENSECAG00000023401)	MYO1F (ENSECAG00000016782)	ADAMTS10 (ENSECAG00000016210)	NFILZ (ENSECAG00000053206)	ENSECAG00000005142	ENSECAG00000032552	ENSECAG00000057164	ENSECAG00000029264	ENSECAG00000053886	ENSECAG00000043478	ZNF558 (ENSECAG00000012836)
Donkey	MODERN SPECIES	12	ENSEASG00005012468 #9	FAT3 (ENSEASG00005012460) #10	ENSEASG00005012365	MTNR1B (ENSEASG00005012345) #11	SLC36A4 (ENSEASG00005012341) #12	DEUP1 (ENSEASG00005012331) #13	SMCO4 (ENSEASG00005012324) #14	CEP295 (ENSEASG00005012313) #15	TAF1D (ENSEASG00005012293) #16	C11orf54 (ENSEASG00005012286) #17	MED17 (ENSEASG00005012254) #18	VSTM5 (ENSEASG00005012241) #19	ENSEASG00005012238	HEPHL1 (ENSEASG00005012218) #20	PANX1 (ENSEASG00005012200) #21	IZUMO1R (ENSEASG00005035464) #22	GPR83 (ENSEASG00005012119) #23	MRE11 (ENSEASG00005011342) #24	ANKRD49 (ENSEASG00005032651) #25	C11orf97 (ENSEASG00005011314) #26	FUT4 (ENSEASG00005011312) #27	PIWIL4 (ENSEASG00005027983) #28	AMOTL1 (ENSEASG00005011287)	CWC15 (ENSEASG00005011279)	ENSEASG00005028515	ENSEASG00005011277	ENDOD1 (ENSEASG00005028824)	SESN3 (ENSEASG00005011270)	FAM76B (ENSEASG00005011231)	CEP57 (ENSEASG00005011227)	MTMR2 (ENSEASG00005011224)
Atlantogenata	ANCESTRAL SPECIES	40														ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a	ENSGT00390000004986
Afrotheria	ANCESTRAL SPECIES	43														ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a	ENSGT00390000004986
Afrotheria_a	ANCESTRAL SPECIES	41														ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT00940000162152	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a	ENSGT00390000004986
Elephant	MODERN SPECIES	340	ENSLAFG00000027345	FAT3 (ENSLAFG00000017223) #10	ENSLAFG00000025161	MTNR1B (ENSLAFG00000028028) #11	SLC36A4 (ENSLAFG00000021548) #12	DEUP1 (ENSLAFG00000015716) #13	SMCO4 (ENSLAFG00000006995) #14	ENSLAFG00000020915 #15	TAF1D (ENSLAFG00000023200) #16	C11orf54 (ENSLAFG00000023184) #17	MED17 (ENSLAFG00000018587) #18	VSTM5 (ENSLAFG00000020501) #19	ENSLAFG00000030318	HEPHL1 (ENSLAFG00000012664) #20	PANX1 (ENSLAFG00000011329) #21	IZUMO1R (ENSLAFG00000032394) #22	GPR83 (ENSLAFG00000016367) #23	MRE11 (ENSLAFG00000016373) #24	ANKRD49 (ENSLAFG00000003825) #25	FUT4 (ENSLAFG00000008415) #27	PIWIL4 (ENSLAFG00000008418) #28	AMOTL1 (ENSLAFG00000022009)	CWC15 (ENSLAFG00000004456)	KDM4D (ENSLAFG00000004460)	ENSLAFG00000028723	ENDOD1 (ENSLAFG00000010482)	SESN3 (ENSLAFG00000001537)	FAM76B (ENSLAFG00000014029)	CEP57 (ENSLAFG00000014511)	MTMR2 (ENSLAFG00000008600)	MAML2 (ENSLAFG00000001279)
Hyrax	MODERN SPECIES	10982																IZUMO1R (ENSPCAG00000013646) #22
Tenrec	MODERN SPECIES	7412																IZUMO1R (ENSETEG00000012005) #22
Xenarthra	ANCESTRAL SPECIES																	ENSGT00950000183144.A.j #22
Armadillo	MODERN SPECIES	2877																IZUMO1R (ENSDNOG00000045885) #22
Sloth	MODERN SPECIES	11011																IZUMO1R (ENSCHOG00000005655) #22
Marsupialia	ANCESTRAL SPECIES	5	ENSGT01040000240383.b.a.a.l.a.b	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981 #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a	ENSGT00390000004986
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT01040000240383.b.a.a.l.a.b	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981.j #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000161737.n.b.a	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Diprotodontia	ANCESTRAL SPECIES	11	ENSGT01040000240383.a.a.b.b	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981.j #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000161737.n.b.a	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00950000183201.a
Diprotodontia_a	ANCESTRAL SPECIES	9	ENSGT01040000240383.a.a.b.b.c.a	ENSGT01030000234598.b.a.b.k.b #8	ENSGT00940000154174 #9	ENSGT00940000154981.j #10	ENSGT00940000162341 #11	ENSGT00940000160117 #12	ENSGT00940000153190.B.a #13	ENSGT00390000015987 #14	ENSGT00940000153123.A #15	ENSGT00390000009061 #16	ENSGT00390000017214 #17	ENSGT00390000011810 #18	ENSGT01100000263551.b.a.b #19	ENSGT00940000157994 #20	ENSGT00940000153972.A #21	ENSGT00950000183144.A.j #22	ENSGT00940000154336.d #23	ENSGT00390000017288 #24	ENSGT00390000003919 #25	ENSGT00520000058823 #26	ENSGT00940000162506 #27	ENSGT00950000183200.A.a.a #28	ENSGT00940000160158	ENSGT00390000012084	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000161737.n.b.a	ENSGT00940000159074	ENSGT00530000063695.a	ENSGT00940000153669.a.a	ENSGT00950000183201.a
Common wonbat	MODERN SPECIES	459		FAT3 (ENSVURG00010009960) #10	ENSVURG00010010016	ENSVURG00010010020	ENSVURG00010010023	SLC36A4 (ENSVURG00010010032) #12	DEUP1 (ENSVURG00010010055) #13	ENSVURG00010010135 #14	ENSVURG00010010145 #15	ENSVURG00010010253 #16	C11orf54 (ENSVURG00010010260) #17	MED17 (ENSVURG00010010274) #18	VSTM5 (ENSVURG00010010292) #19	HEPHL1 (ENSVURG00010010303) #20	PANX1 (ENSVURG00010010344) #21	IZUMO1R (ENSVURG00010010349) #22	GPR83 (ENSVURG00010010363) #23	MRE11 (ENSVURG00010010496) #24	ANKRD49 (ENSVURG00010010565) #25	C11orf97 (ENSVURG00010010576) #26	ENSVURG00010010592 #27	PIWIL4 (ENSVURG00010010619) #28	AMOTL1 (ENSVURG00010010648)	CWC15 (ENSVURG00010010692)	ENDOD1 (ENSVURG00010010700)	SESN3 (ENSVURG00010010715)	ENSVURG00010010758	FAM76B (ENSVURG00010010774)	CEP57 (ENSVURG00010010807)	ENSVURG00010010854	MAML2 (ENSVURG00010010918)
koala	MODERN SPECIES	86	ENSPCIG00000020779	ENSPCIG00000034515	ENSPCIG00000031045 #10	MTNR1B (ENSPCIG00000003688) #11	ENSPCIG00000005509	SLC36A4 (ENSPCIG00000003665) #12	DEUP1 (ENSPCIG00000003590) #13	ENSPCIG00000003565 #14	ENSPCIG00000003418 #16	C11orf54 (ENSPCIG00000003405) #17	MED17 (ENSPCIG00000003395) #18	VSTM5 (ENSPCIG00000003391) #19	HEPHL1 (ENSPCIG00000012215) #20	PANX1 (ENSPCIG00000003374) #21	ENSPCIG00000003364	IZUMO1R (ENSPCIG00000003349) #22	GPR83 (ENSPCIG00000036706) #23	MRE11 (ENSPCIG00000009614) #24	ANKRD49 (ENSPCIG00000009610) #25	C11orf97 (ENSPCIG00000034457) #26	ENSPCIG00000030597 #27	PIWIL4 (ENSPCIG00000030600) #28	AMOTL1 (ENSPCIG00000001368)	CWC15 (ENSPCIG00000001348)	ENDOD1 (ENSPCIG00000001331)	SESN3 (ENSPCIG00000001309)	FAM76B (ENSPCIG00000001260)	CEP57 (ENSPCIG00000035948)	MTMR2 (ENSPCIG00000001170)	ENSPCIG00000001152	CCDC82 (ENSPCIG00000001133)
Wallaby	MODERN SPECIES	8953																ENSMEUG00000009592 #22
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000025058	FAT3 (ENSSHAG00000012153) #10	MTNR1B (ENSSHAG00000011264) #11	ENSSHAG00000023084	ENSSHAG00000010485	SLC36A4 (ENSSHAG00000010022) #12	DEUP1 (ENSSHAG00000007373) #13	SMCO4 (ENSSHAG00000024792) #14	ENSSHAG00000006706 #15	ENSSHAG00000005874 #16	C11orf54 (ENSSHAG00000005435) #17	MED17 (ENSSHAG00000004223) #18	VSTM5 (ENSSHAG00000021368) #19	HEPHL1 (ENSSHAG00000018243) #20	PANX1 (ENSSHAG00000018175) #21	IZUMO1R (ENSSHAG00000029294) #22	GPR83 (ENSSHAG00000024803) #23	MRE11 (ENSSHAG00000017729) #24	ENSSHAG00000021016 #25	ENSSHAG00000028715 #26	FUT4 (ENSSHAG00000032130) #27	PIWIL4 (ENSSHAG00000017415) #28	AMOTL1 (ENSSHAG00000016815)	ENSSHAG00000016534	ENDOD1 (ENSSHAG00000016362)	SESN3 (ENSSHAG00000016018)	ENSSHAG00000014772	FAM76B (ENSSHAG00000030305)	CEP57 (ENSSHAG00000013049)	MTMR2 (ENSSHAG00000012900)	MAML2 (ENSSHAG00000024964)
Opossum	MODERN SPECIES	3	SLC36A4 (ENSMODG00000000957) #12	ENSMODG00000024309	DEUP1 (ENSMODG00000000922) #13	ENSMODG00000000726	ENSMODG00000030044	ENSMODG00000000714 #15	ENSMODG00000042713	ENSMODG00000047013	ENSMODG00000008546 #16	ENSMODG00000000412 #17	MED17 (ENSMODG00000000383) #18	VSTM5 (ENSMODG00000045386) #19	HEPHL1 (ENSMODG00000000357) #20	PANX1 (ENSMODG00000000278) #21	ENSMODG00000041397	IZUMO1R (ENSMODG00000000260) #22	GPR83 (ENSMODG00000000236) #23	MRE11 (ENSMODG00000000231) #24	ANKRD49 (ENSMODG00000000222) #25	ENSMODG00000043171	ENSMODG00000028613 #26	FUT4 (ENSMODG00000024373) #27	PIWIL4 (ENSMODG00000000217) #28	AMOTL1 (ENSMODG00000000180)	ENSMODG00000000169	ENDOD1 (ENSMODG00000000165)	SESN3 (ENSMODG00000000163)	FAM76B (ENSMODG00000000139)	CEP57 (ENSMODG00000000131)	MTMR2 (ENSMODG00000000116)	MAML2 (ENSMODG00000036741)
Mammalia	ANCESTRAL SPECIES	91	ENSGT00940000155158	ENSGT00510000047299	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611
Theria	ANCESTRAL SPECIES	15	ENSGT00510000047299	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Eutheria	DUPLICATION
Eutheria	DUPLICATION
Eutheria	DUPLICATION
Eutheria	DUPLICATION
Eutheria	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.a.a ##22
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b
Laurasiatheria	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.a.a ##22
Laurasiatheria_a	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.a.a ##22
Laurasiatheria_b	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.a.a ##22
Carnivora	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.a.a ##22
Caniformia	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.a.a ##22
Canidae	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.a.a ##22
Canis_lupus	ANCESTRAL SPECIES	28	ENSGT00390000007962	ENSGT00390000011708.a.k.b	ENSGT00390000011708.a.k.a.a	ENSGT00940000154616.b	ENSGT00940000157705.l	ENSGT00940000158478	ENSGT00940000157670	ENSGT00940000163940	ENSGT00390000016427	ENSGT00940000159163	ENSGT00940000155539.a.a	ENSGT00940000162060	ENSGT00940000161758	ENSGT00940000155743	ENSGT01030000234791.l	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00390000014690	ENSGT00390000002752.w.b	ENSGT00950000182913.A.a	ENSGT00390000006602	ENSGT00390000001053	ENSGT00390000010003	ENSGT00940000155479	ENSGT00510000048628	ENSGT00510000048581	ENSGT00940000154943	ENSGT00950000182903.b.b	ENSGT00390000015195	ENSGT00940000161288	ENSGT00940000157434	ENSGT00390000002905
Dingo	MODERN SPECIES	214	C11orf71 (ENSCAFG00020002560)	NNMT (ENSCAFG00020002563)	ENSCAFG00020002568	ZBTB16 (ENSCAFG00020002582)	HTR3A (ENSCAFG00020002588)	HTR3B (ENSCAFG00020002619)	USP28 (ENSCAFG00020002820)	CLDN25 (ENSCAFG00020004160)	ZW10 (ENSCAFG00020004218)	TMPRSS5 (ENSCAFG00020005248)	DRD2 (ENSCAFG00020005329)	ANKK1 (ENSCAFG00020005346)	TTC12 (ENSCAFG00020005382)	NCAM1 (ENSCAFG00020005853)	ENSCAFG00020005932	ENSCAFG00020005937 ##22	ENSCAFG00020005942	PTS (ENSCAFG00020005952)	BCO2 (ENSCAFG00020005962)	TEX12 (ENSCAFG00020006024)	IL18 (ENSCAFG00020006031)	SDHD (ENSCAFG00020006032)	TIMM8B (ENSCAFG00020006035)	NKAPD1 (ENSCAFG00020006038)	PIH1D2 (ENSCAFG00020006045)	DLAT (ENSCAFG00020006065)	DIXDC1 (ENSCAFG00020006187)	HSPB2 (ENSCAFG00020006298)	CRYAB (ENSCAFG00020006303)	CFAP68 (ENSCAFG00020006306)	FDXACB1 (ENSCAFG00020006314)
Dog	MODERN SPECIES	33	C11orf71 (ENSCAFG00845004631)	NNMT (ENSCAFG00845004639)	ENSCAFG00845000214	ZBTB16 (ENSCAFG00845000220)	HTR3A (ENSCAFG00845000246)	HTR3B (ENSCAFG00845000289)	USP28 (ENSCAFG00845000391)	CLDN25 (ENSCAFG00845000483)	ZW10 (ENSCAFG00845000507)	TMPRSS5 (ENSCAFG00845000619)	DRD2 (ENSCAFG00845000700)	ANKK1 (ENSCAFG00845000729)	TTC12 (ENSCAFG00845000767)	NCAM1 (ENSCAFG00845000915)	ENSCAFG00845001232	ENSCAFG00845001244 ##22	ENSCAFG00845001254	BCO2 (ENSCAFG00845001320)	TEX12 (ENSCAFG00845001519)	IL18 (ENSCAFG00845001557)	SDHD (ENSCAFG00845001604)	ENSCAFG00845001635	NKAPD1 (ENSCAFG00845001646)	ENSCAFG00845001671	DLAT (ENSCAFG00845001723)	DIXDC1 (ENSCAFG00845001790)	C11orf52 (ENSCAFG00845001835)	HSPB2 (ENSCAFG00845001858)	CRYAB (ENSCAFG00845001876)	CFAP68 (ENSCAFG00845001951)	ALG9 (ENSCAFG00845002061)
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00940000161220	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b
Primates	ANCESTRAL SPECIES		ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.o ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Lemuriformes	ANCESTRAL SPECIES	13	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.o ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Lemuriformes_a	ANCESTRAL SPECIES	50	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.o ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Coquerels sifaka	MODERN SPECIES	338	ENSPCOG00000006183	RHOG (ENSPCOG00000010178)	PGAP2 (ENSPCOG00000023518)	NUP98 (ENSPCOG00000020820)	CHRNA10 (ENSPCOG00000000604)	ART1 (ENSPCOG00000023847)	ART5 (ENSPCOG00000019894)	ENSPCOG00000008155	ENSPCOG00000018031	RNF121 (ENSPCOG00000028445)	IL18BP (ENSPCOG00000022571)	NUMA1 (ENSPCOG00000028849)	LAMTOR1 (ENSPCOG00000019358)	TOMT (ENSPCOG00000021317)	ANAPC15 (ENSPCOG00000022372)	FOLR3 (ENSPCOG00000015335) ##22	FOLR1 (ENSPCOG00000024246) ##22	FOLR2 (ENSPCOG00000026871) ##22	INPPL1 (ENSPCOG00000017270)	PHOX2A (ENSPCOG00000013897)	CLPB (ENSPCOG00000025816)	PDE2A (ENSPCOG00000025497)	ARAP1 (ENSPCOG00000023351)	STARD10 (ENSPCOG00000019255)	ATG16L2 (ENSPCOG00000024003)	FCHSD2 (ENSPCOG00000011232)	ARHGEF17 (ENSPCOG00000025949)	RELT (ENSPCOG00000014211)	FAM168A (ENSPCOG00000020680)	PLEKHB1 (ENSPCOG00000019823)	RAB6A (ENSPCOG00000021991)
Haplorrhini	ANCESTRAL SPECIES		ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000161220	ENSGT00390000000938.p.b	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Tarsier	MODERN SPECIES	5849	WDFY2 (ENSTSYG00000000923)	INTS6 (ENSTSYG00000006630)	SERPINE3 (ENSTSYG00000006550)	FAM124A (ENSTSYG00000001829)	C13orf42 (ENSTSYG00000025780)	ENSTSYG00000012177	ENSTSYG00000006762	ENSTSYG00000026971	ENSTSYG00000030005	RNF121 (ENSTSYG00000006770)	IL18BP (ENSTSYG00000034181)	NUMA1 (ENSTSYG00000013691)	LAMTOR1 (ENSTSYG00000014730)	TOMT (ENSTSYG00000014729)	ANAPC15 (ENSTSYG00000014179)	FOLR3 (ENSTSYG00000036287) ##22
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00940000155158	ENSGT00510000047299.e	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00510000047925	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000154879.ib	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Cebidae	ANCESTRAL SPECIES		ENSGT00940000155158	ENSGT00510000047299.e	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000154879.ib	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	2	OR52M1 (ENSCJAG00000023147)	OR52K2 (ENSCJAG00000045398)	TRIM21 (ENSCJAG00000015591)	RRM1 (ENSCJAG00000015495)	RHOG (ENSCJAG00000048517)	ENSCJAG00000015470	ENSCJAG00000015332	CHRNA10 (ENSCJAG00000015465)	ART1 (ENSCJAG00000015457)	ENSCJAG00000032556	ENSCJAG00000071881	IL18BP (ENSCJAG00000015324)	NUMA1 (ENSCJAG00000015253)	LRTOMT (ENSCJAG00000046450)	ANAPC15 (ENSCJAG00000069144)	ENSCJAG00000074280 ##22	ENSCJAG00000015239 ##22	FOLR1 (ENSCJAG00000015224) ##22	FOLR2 (ENSCJAG00000015212) ##22	INPPL1 (ENSCJAG00000015191)	PHOX2A (ENSCJAG00000015188)	CLPB (ENSCJAG00000015121)	ENSCJAG00000085949	PDE2A (ENSCJAG00000015101)	ARAP1 (ENSCJAG00000015038)	ENSCJAG00000074795	STARD10 (ENSCJAG00000043524)	ATG16L2 (ENSCJAG00000014994)	FCHSD2 (ENSCJAG00000014990)	ENSCJAG00000084151	P2RY6 (ENSCJAG00000022091)
Marmoset	MODERN SPECIES	2	OR52K2 (ENSCJAG00000045398)	TRIM21 (ENSCJAG00000015591)	RRM1 (ENSCJAG00000015495)	RHOG (ENSCJAG00000048517)	ENSCJAG00000015470	ENSCJAG00000015332	CHRNA10 (ENSCJAG00000015465)	ART1 (ENSCJAG00000015457)	ENSCJAG00000032556	ENSCJAG00000071881	IL18BP (ENSCJAG00000015324)	NUMA1 (ENSCJAG00000015253)	LRTOMT (ENSCJAG00000046450)	ANAPC15 (ENSCJAG00000069144)	ENSCJAG00000074280 ##22	ENSCJAG00000015239 ##22	FOLR1 (ENSCJAG00000015224) ##22	FOLR2 (ENSCJAG00000015212) ##22	INPPL1 (ENSCJAG00000015191)	PHOX2A (ENSCJAG00000015188)	CLPB (ENSCJAG00000015121)	ENSCJAG00000085949	PDE2A (ENSCJAG00000015101)	ARAP1 (ENSCJAG00000015038)	ENSCJAG00000074795	STARD10 (ENSCJAG00000043524)	ATG16L2 (ENSCJAG00000014994)	FCHSD2 (ENSCJAG00000014990)	ENSCJAG00000084151	P2RY6 (ENSCJAG00000022091)	ARHGEF17 (ENSCJAG00000015946)
Cebidae_a	ANCESTRAL SPECIES	10	ENSGT00940000155158	ENSGT00510000047299.e	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000154879.ib	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Capuchin	MODERN SPECIES	79	RHOG (ENSCCAG00000007123)	PGAP2 (ENSCCAG00000037016)	NUP98 (ENSCCAG00000022009)	CHRNA10 (ENSCCAG00000024887)	ART1 (ENSCCAG00000037398)	ART5 (ENSCCAG00000036098)	ENSCCAG00000025594	RNF121 (ENSCCAG00000027188)	IL18BP (ENSCCAG00000029744)	NUMA1 (ENSCCAG00000036774)	LRRC51 (ENSCCAG00000027389)	LAMTOR1 (ENSCCAG00000031446)	TOMT (ENSCCAG00000034068)	ENSCCAG00000000895	ENSCCAG00000026504	ENSCCAG00000033272 ##22	ENSCCAG00000026662	ENSCCAG00000032275 ##22	FOLR2 (ENSCCAG00000032155) ##22	INPPL1 (ENSCCAG00000024212)	PHOX2A (ENSCCAG00000028435)	CLPB (ENSCCAG00000032490)	PDE2A (ENSCCAG00000020637)	ARAP1 (ENSCCAG00000034708)	STARD10 (ENSCCAG00000027567)	ATG16L2 (ENSCCAG00000036440)	FCHSD2 (ENSCCAG00000024519)	ENSCCAG00000034490	P2RY2 (ENSCCAG00000020034)	P2RY6 (ENSCCAG00000019886)	ARHGEF17 (ENSCCAG00000029348)
Bolivian squirrel monkey	MODERN SPECIES	50	NUP98 (ENSSBOG00000030446)	ENSSBOG00000017856	CHRNA10 (ENSSBOG00000013019)	ART1 (ENSSBOG00000035768)	ART5 (ENSSBOG00000019182)	ENSSBOG00000028191	ENSSBOG00000011177	RNF121 (ENSSBOG00000029753)	ENSSBOG00000027382	IL18BP (ENSSBOG00000033231)	NUMA1 (ENSSBOG00000032575)	ENSSBOG00000032090	TOMT (ENSSBOG00000033709)	ENSSBOG00000035680	FOLR2 (ENSSBOG00000030720) ##22	ENSSBOG00000027615 ##22	FOLR1 (ENSSBOG00000032792) ##22	INPPL1 (ENSSBOG00000028042)	PHOX2A (ENSSBOG00000019317)	CLPB (ENSSBOG00000031007)	PDE2A (ENSSBOG00000035008)	ARAP1 (ENSSBOG00000031716)	STARD10 (ENSSBOG00000022143)	ATG16L2 (ENSSBOG00000027588)	FCHSD2 (ENSSBOG00000018307)	ENSSBOG00000023173	ENSSBOG00000027673	ENSSBOG00000027043	P2RY2 (ENSSBOG00000010684)	ARHGEF17 (ENSSBOG00000024564)	RELT (ENSSBOG00000027236)
Mas night monkey	MODERN SPECIES	830	RHOG (ENSANAG00000015219)	ENSANAG00000037001	NUP98 (ENSANAG00000020861)	ENSANAG00000030802	CHRNA10 (ENSANAG00000038522)	ART1 (ENSANAG00000025055)	ART5 (ENSANAG00000025964)	TRPC2 (ENSANAG00000028976)	ENSANAG00000022344	RNF121 (ENSANAG00000037407)	IL18BP (ENSANAG00000020709)	NUMA1 (ENSANAG00000038526)	LAMTOR1 (ENSANAG00000037872)	TOMT (ENSANAG00000032602)	ENSANAG00000028571	FOLR3 (ENSANAG00000023349) ##22	FOLR1 (ENSANAG00000036278) ##22	FOLR2 (ENSANAG00000026670) ##22	INPPL1 (ENSANAG00000027766)	PHOX2A (ENSANAG00000023728)	CLPB (ENSANAG00000032809)	PDE2A (ENSANAG00000032518)	ARAP1 (ENSANAG00000038203)	STARD10 (ENSANAG00000021823)	ATG16L2 (ENSANAG00000001465)	ENSANAG00000038483	FCHSD2 (ENSANAG00000027876)	P2RY2 (ENSANAG00000004407)	P2RY6 (ENSANAG00000012418)	ARHGEF17 (ENSANAG00000033936)	RELT (ENSANAG00000019742)
Catarrhini	DUPLICATION
Catarrhini	ANCESTRAL SPECIES	12	ENSGT00940000162925	ENSGT00940000163432	ENSGT00940000159942.a	ENSGT00940000159832.i	ENSGT00940000156607.a.a.b	ENSGT00940000157820.a.b	ENSGT01030000234626.A.b.o.a	ENSGT00940000156607.a.a.a	ENSGT00390000014753.l.a	ENSGT00940000161153	ENSGT00440000034745	ENSGT00940000162022	ENSGT00440000033720.a	ENSGT00390000000062.x.b.g.b	ENSGT00390000000938.p.b	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00390000000062.x.b.g.a	ENSGT00940000153421.a.a.a.a.b.i	ENSGT00390000016722	ENSGT00390000016478.i.b	ENSGT00940000155212	ENSGT00390000005717	ENSGT00410000025556.a.b	ENSGT00940000158265	ENSGT00940000155821	ENSGT00390000004175	ENSGT00940000153904.a	ENSGT00390000009151	ENSGT00950000182965.b.eb.b	ENSGT00950000183035.a.b.a	ENSGT00950000182803.B.d.b.v.b
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00510000047925	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00900000140979.a.a.`b.a.o.b	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00990000205266	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00510000047925	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00990000205266	ENSGT00940000160995.b.e.a	ENSGT00390000001538.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Pan	ANCESTRAL SPECIES	1	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00910000147131	ENSGT00910000144208.g.a	ENSGT00940000163626.f.b	ENSGT00390000009472.b.b	ENSGT00940000160995.b.e.a	ENSGT00390000001538.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00910000144184.q.a.h	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b
Chimpanzee	MODERN SPECIES	2	ENSPTRG00000047907	ENSPTRG00000044703	ENSPTRG00000007738	ENSPTRG00000049924	ENSPTRG00000050141	ENSPTRG00000028485	DEFB130 (ENSPTRG00000032474)	DEFB131B (ENSPTRG00000050172)	XNDC1N (ENSPTRG00000023860)	RNF121 (ENSPTRG00000004021)	IL18BP (ENSPTRG00000004022)	NUMA1 (ENSPTRG00000004023)	LAMTOR1 (ENSPTRG00000004024)	LRTOMT (ENSPTRG00000004025)	ENSPTRG00000046097	FOLR3 (ENSPTRG00000004027) ##22	ENSPTRG00000045624 ##22	FOLR1 (ENSPTRG00000004029) ##22	FOLR2 (ENSPTRG00000004030) ##22	INPPL1 (ENSPTRG00000004031)	PHOX2A (ENSPTRG00000004032)	ENSPTRG00000043331	ENSPTRG00000045377	CLPB (ENSPTRG00000004035)	PDE2A (ENSPTRG00000004036)	ARAP1 (ENSPTRG00000034443)	STARD10 (ENSPTRG00000004038)	ATG16L2 (ENSPTRG00000004039)	FCHSD2 (ENSPTRG00000004040)	ENSPTRG00000045147	P2RY2 (ENSPTRG00000004042)
Bonobo	MODERN SPECIES	2	CTTN (ENSPPAG00000041298)	SHANK2 (ENSPPAG00000040027)	DHCR7 (ENSPPAG00000038909)	NADSYN1 (ENSPPAG00000001380)	ENSPPAG00000044001	ENSPPAG00000029134	ENSPPAG00000035835	ENSPPAG00000040916	ENSPPAG00000012937	RNF121 (ENSPPAG00000033091)	IL18BP (ENSPPAG00000037702)	NUMA1 (ENSPPAG00000030445)	LAMTOR1 (ENSPPAG00000040943)	TOMT (ENSPPAG00000031661)	ENSPPAG00000018102	FOLR3 (ENSPPAG00000044084) ##22	ENSPPAG00000044083 ##22	FOLR1 (ENSPPAG00000030512) ##22	FOLR2 (ENSPPAG00000034921) ##22	INPPL1 (ENSPPAG00000044079)	ENSPPAG00000033151	ENSPPAG00000030469	ENSPPAG00000043414	CLPB (ENSPPAG00000016490)	PDE2A (ENSPPAG00000037525)	ARAP1 (ENSPPAG00000037129)	STARD10 (ENSPPAG00000038765)	ATG16L2 (ENSPPAG00000042061)	ENSPPAG00000042264	ENSPPAG00000043302	P2RY2 (ENSPPAG00000025105)
Human	MODERN SPECIES	2	KRTAP5-8 (ENSG00000241233)	KRTAP5-9 (ENSG00000254997)	KRTAP5-10 (ENSG00000204572)	KRTAP5-11 (ENSG00000204571)	DEFB108B (ENSG00000184276)	XNDC1N (ENSG00000254469)	DEFB131B (ENSG00000225805)	RNF121 (ENSG00000137522)	IL18BP (ENSG00000137496)	NUMA1 (ENSG00000137497)	LRTOMT (ENSG00000284922)	LRRC51 (ENSG00000184154)	LAMTOR1 (ENSG00000149357)	TOMT (ENSG00000284844)	ANAPC15 (ENSG00000110200)	FOLR3 (ENSG00000110203) ##22	FOLR1 (ENSG00000110195) ##22	FOLR2 (ENSG00000165457) ##22	INPPL1 (ENSG00000165458)	PHOX2A (ENSG00000165462)	CLPB (ENSG00000162129)	PDE2A (ENSG00000186642)	ARAP1 (ENSG00000186635)	STARD10 (ENSG00000214530)	ATG16L2 (ENSG00000168010)	FCHSD2 (ENSG00000137478)	P2RY2 (ENSG00000175591)	P2RY6 (ENSG00000171631)	ARHGEF17 (ENSG00000110237)	RELT (ENSG00000054967)	FAM168A (ENSG00000054965)
Gorilla	MODERN SPECIES	2	SHANK2 (ENSGGOG00000003019)	DHCR7 (ENSGGOG00000006547)	NADSYN1 (ENSGGOG00000006551)	ENSGGOG00000038292	KRTAP5-10 (ENSGGOG00000016395)	ENSGGOG00000036265	DEFB108B (ENSGGOG00000028100)	DEFB130A (ENSGGOG00000003692)	ENSGGOG00000027132	RNF121 (ENSGGOG00000016954)	IL18BP (ENSGGOG00000016963)	NUMA1 (ENSGGOG00000016968)	TOMT (ENSGGOG00000012492)	LAMTOR1 (ENSGGOG00000012495)	ENSGGOG00000012501	FOLR3 (ENSGGOG00000003944) ##22	ENSGGOG00000038422 ##22	FOLR1 (ENSGGOG00000005569) ##22	FOLR2 (ENSGGOG00000011292) ##22	INPPL1 (ENSGGOG00000011295)	PHOX2A (ENSGGOG00000011309)	ENSGGOG00000022254	CLPB (ENSGGOG00000006057)	PDE2A (ENSGGOG00000014611)	ARAP1 (ENSGGOG00000007805)	STARD10 (ENSGGOG00000012452)	ATG16L2 (ENSGGOG00000003472)	FCHSD2 (ENSGGOG00000034994)	P2RY2 (ENSGGOG00000012903)	P2RY6 (ENSGGOG00000008068)	ARHGEF17 (ENSGGOG00000010255)
Orangutan	MODERN SPECIES	2	STIM1 (ENSPPYG00000003626)	ENSPPYG00000040975	RHOG (ENSPPYG00000003629)	PGAP2 (ENSPPYG00000038940)	NUP98 (ENSPPYG00000003631)	CHRNA10 (ENSPPYG00000003632)	ART1 (ENSPPYG00000003633)	ART5 (ENSPPYG00000003634)	XNDC1 (ENSPPYG00000003638)	RNF121 (ENSPPYG00000003640)	IL18BP (ENSPPYG00000003641)	NUMA1 (ENSPPYG00000003642)	LRTOMT (ENSPPYG00000029740)	LAMTOR1 (ENSPPYG00000003645)	ENSPPYG00000003646	FOLR3 (ENSPPYG00000003647) ##22	ENSPPYG00000033361 ##22	FOLR1 (ENSPPYG00000030155) ##22	FOLR2 (ENSPPYG00000003648) ##22	INPPL1 (ENSPPYG00000003649)	PHOX2A (ENSPPYG00000003650)	CLPB (ENSPPYG00000003651)	PDE2A (ENSPPYG00000003652)	ARAP1 (ENSPPYG00000003653)	ENSPPYG00000003654	ATG16L2 (ENSPPYG00000003655)	FCHSD2 (ENSPPYG00000003656)	P2RY2 (ENSPPYG00000003658)	P2RY6 (ENSPPYG00000003659)	ARHGEF17 (ENSPPYG00000029870)	RELT (ENSPPYG00000003660)
Gibbon	MODERN SPECIES	5	ENSNLEG00000017313	RHOG (ENSNLEG00000030503)	PGAP2 (ENSNLEG00000032057)	NUP98 (ENSNLEG00000017280)	CHRNA10 (ENSNLEG00000017278)	ART1 (ENSNLEG00000017275)	ART5 (ENSNLEG00000017272)	ENSNLEG00000031989	ENSNLEG00000028363	RNF121 (ENSNLEG00000017264)	IL18BP (ENSNLEG00000017257)	ENSNLEG00000017241	LAMTOR1 (ENSNLEG00000017238)	LRRC51 (ENSNLEG00000030337)	ENSNLEG00000017234	FOLR3 (ENSNLEG00000017224) ##22	FOLR1 (ENSNLEG00000035852) ##22	FOLR2 (ENSNLEG00000027834) ##22	INPPL1 (ENSNLEG00000017207)	ENSNLEG00000034398	ENSNLEG00000033376	ENSNLEG00000017196	PDE2A (ENSNLEG00000017175)	ARAP1 (ENSNLEG00000032891)	STARD10 (ENSNLEG00000017168)	ATG16L2 (ENSNLEG00000017146)	FCHSD2 (ENSNLEG00000017136)	P2RY2 (ENSNLEG00000017134)	P2RY6 (ENSNLEG00000028391)	ARHGEF17 (ENSNLEG00000017127)	RELT (ENSNLEG00000017122)
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Hominidae	ANCESTRAL SPECIES	1	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00510000047925	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT01050000244900.a.a.b	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00990000205266	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00510000047925	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00990000205266	ENSGT00940000160995.b.e.a	ENSGT00390000001538.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Pan	ANCESTRAL SPECIES	1	ENSGT00390000010152	ENSGT00910000147131	ENSGT00910000144208.g.a	ENSGT00940000163626.f.b	ENSGT00390000009472.b.b	ENSGT00940000160995.b.e.a	ENSGT00390000001538.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00910000144184.q.a.h	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Chimpanzee	MODERN SPECIES	2	ENSPTRG00000044703	ENSPTRG00000007738	ENSPTRG00000049924	ENSPTRG00000050141	ENSPTRG00000028485	DEFB130 (ENSPTRG00000032474)	DEFB131B (ENSPTRG00000050172)	XNDC1N (ENSPTRG00000023860)	RNF121 (ENSPTRG00000004021)	IL18BP (ENSPTRG00000004022)	NUMA1 (ENSPTRG00000004023)	LAMTOR1 (ENSPTRG00000004024)	LRTOMT (ENSPTRG00000004025)	ENSPTRG00000046097	FOLR3 (ENSPTRG00000004027) ##22	ENSPTRG00000045624 ##22	FOLR1 (ENSPTRG00000004029) ##22	FOLR2 (ENSPTRG00000004030) ##22	INPPL1 (ENSPTRG00000004031)	PHOX2A (ENSPTRG00000004032)	ENSPTRG00000043331	ENSPTRG00000045377	CLPB (ENSPTRG00000004035)	PDE2A (ENSPTRG00000004036)	ARAP1 (ENSPTRG00000034443)	STARD10 (ENSPTRG00000004038)	ATG16L2 (ENSPTRG00000004039)	FCHSD2 (ENSPTRG00000004040)	ENSPTRG00000045147	P2RY2 (ENSPTRG00000004042)	P2RY6 (ENSPTRG00000004043)
Bonobo	MODERN SPECIES	2	SHANK2 (ENSPPAG00000040027)	DHCR7 (ENSPPAG00000038909)	NADSYN1 (ENSPPAG00000001380)	ENSPPAG00000044001	ENSPPAG00000029134	ENSPPAG00000035835	ENSPPAG00000040916	ENSPPAG00000012937	RNF121 (ENSPPAG00000033091)	IL18BP (ENSPPAG00000037702)	NUMA1 (ENSPPAG00000030445)	LAMTOR1 (ENSPPAG00000040943)	TOMT (ENSPPAG00000031661)	ENSPPAG00000018102	FOLR3 (ENSPPAG00000044084) ##22	ENSPPAG00000044083 ##22	FOLR1 (ENSPPAG00000030512) ##22	FOLR2 (ENSPPAG00000034921) ##22	INPPL1 (ENSPPAG00000044079)	ENSPPAG00000033151	ENSPPAG00000030469	ENSPPAG00000043414	CLPB (ENSPPAG00000016490)	PDE2A (ENSPPAG00000037525)	ARAP1 (ENSPPAG00000037129)	STARD10 (ENSPPAG00000038765)	ATG16L2 (ENSPPAG00000042061)	ENSPPAG00000042264	ENSPPAG00000043302	P2RY2 (ENSPPAG00000025105)	P2RY6 (ENSPPAG00000023392)
Gorilla	MODERN SPECIES	2	DHCR7 (ENSGGOG00000006547)	NADSYN1 (ENSGGOG00000006551)	ENSGGOG00000038292	KRTAP5-10 (ENSGGOG00000016395)	ENSGGOG00000036265	DEFB108B (ENSGGOG00000028100)	DEFB130A (ENSGGOG00000003692)	ENSGGOG00000027132	RNF121 (ENSGGOG00000016954)	IL18BP (ENSGGOG00000016963)	NUMA1 (ENSGGOG00000016968)	TOMT (ENSGGOG00000012492)	LAMTOR1 (ENSGGOG00000012495)	ENSGGOG00000012501	FOLR3 (ENSGGOG00000003944) ##22	ENSGGOG00000038422 ##22	FOLR1 (ENSGGOG00000005569) ##22	FOLR2 (ENSGGOG00000011292) ##22	INPPL1 (ENSGGOG00000011295)	PHOX2A (ENSGGOG00000011309)	ENSGGOG00000022254	CLPB (ENSGGOG00000006057)	PDE2A (ENSGGOG00000014611)	ARAP1 (ENSGGOG00000007805)	STARD10 (ENSGGOG00000012452)	ATG16L2 (ENSGGOG00000003472)	FCHSD2 (ENSGGOG00000034994)	P2RY2 (ENSGGOG00000012903)	P2RY6 (ENSGGOG00000008068)	ARHGEF17 (ENSGGOG00000010255)	RELT (ENSGGOG00000010271)
Orangutan	MODERN SPECIES	2	ENSPPYG00000040975	RHOG (ENSPPYG00000003629)	PGAP2 (ENSPPYG00000038940)	NUP98 (ENSPPYG00000003631)	CHRNA10 (ENSPPYG00000003632)	ART1 (ENSPPYG00000003633)	ART5 (ENSPPYG00000003634)	XNDC1 (ENSPPYG00000003638)	RNF121 (ENSPPYG00000003640)	IL18BP (ENSPPYG00000003641)	NUMA1 (ENSPPYG00000003642)	LRTOMT (ENSPPYG00000029740)	LAMTOR1 (ENSPPYG00000003645)	ENSPPYG00000003646	FOLR3 (ENSPPYG00000003647) ##22	ENSPPYG00000033361 ##22	FOLR1 (ENSPPYG00000030155) ##22	FOLR2 (ENSPPYG00000003648) ##22	INPPL1 (ENSPPYG00000003649)	PHOX2A (ENSPPYG00000003650)	CLPB (ENSPPYG00000003651)	PDE2A (ENSPPYG00000003652)	ARAP1 (ENSPPYG00000003653)	ENSPPYG00000003654	ATG16L2 (ENSPPYG00000003655)	FCHSD2 (ENSPPYG00000003656)	P2RY2 (ENSPPYG00000003658)	P2RY6 (ENSPPYG00000003659)	ARHGEF17 (ENSPPYG00000029870)	RELT (ENSPPYG00000003660)	FAM168A (ENSPPYG00000003661)
Cercopithecidae	DUPLICATION
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000155158.i	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b
Macaca	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22
Macaca_a	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22
Crab-eating macaque	MODERN SPECIES	5	RHOG (ENSMFAG00000006033)	PGAP2 (ENSMFAG00000036676)	NUP98 (ENSMFAG00000045069)	ENSMFAG00000048588	ART1 (ENSMFAG00000003890)	ENSMFAG00000062116	ART5 (ENSMFAG00000038891)	ENSMFAG00000049163	ENSMFAG00000059552	RNF121 (ENSMFAG00000043086)	ENSMFAG00000007235	NUMA1 (ENSMFAG00000042621)	TOMT (ENSMFAG00000046386)	LAMTOR1 (ENSMFAG00000040752)	FOLR2 (ENSMFAG00000002506) ##22	ENSMFAG00000043902 ##22	FOLR1 (ENSMFAG00000030646) ##22	INPPL1 (ENSMFAG00000037937)	ENSMFAG00000048036	CLPB (ENSMFAG00000039603)	PDE2A (ENSMFAG00000044960)	ARAP1 (ENSMFAG00000039424)	STARD10 (ENSMFAG00000018716)	ENSMFAG00000050335	ENSMFAG00000041534	FCHSD2 (ENSMFAG00000004075)	ENSMFAG00000052451	ENSMFAG00000026637	ENSMFAG00000059191	P2RY6 (ENSMFAG00000028522)	ENSMFAG00000036527
Cercopithecinae_b	ANCESTRAL SPECIES	32	ENSGT00940000155158.i	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b.h	ENSGT00390000013075.a.d	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00950000183087.A.a.b.b.g.e.b.b.a.b	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b
Cercopithecinae_d	ANCESTRAL SPECIES	27	ENSGT00940000155158.i	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b.h	ENSGT00390000013075.a.d	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00950000183087.A.a.b.b.g.e.b.b.a.b	ENSGT01030000234621.C.a.a.b
Drill	MODERN SPECIES	1114	ENSMLEG00000008168	PGAP2 (ENSMLEG00000038507)	NUP98 (ENSMLEG00000043563)	CHRNA10 (ENSMLEG00000019278)	ART1 (ENSMLEG00000030716)	ART5 (ENSMLEG00000008190)	ENSMLEG00000034998	ENSMLEG00000039461	RNF121 (ENSMLEG00000043299)	IL18BP (ENSMLEG00000032241)	NUMA1 (ENSMLEG00000029680)	LAMTOR1 (ENSMLEG00000037079)	TOMT (ENSMLEG00000037107)	ANAPC15 (ENSMLEG00000044094)	ENSMLEG00000037090 ##22	ENSMLEG00000042450 ##22	FOLR1 (ENSMLEG00000030123) ##22	FOLR2 (ENSMLEG00000017682) ##22	INPPL1 (ENSMLEG00000007523)	PHOX2A (ENSMLEG00000028217)	ENSMLEG00000028161	ENSMLEG00000030118	CLPB (ENSMLEG00000015735)	PDE2A (ENSMLEG00000042765)	ARAP1 (ENSMLEG00000028377)	STARD10 (ENSMLEG00000018192)	ATG16L2 (ENSMLEG00000035462)	FCHSD2 (ENSMLEG00000038604)
Vervet Monkey	MODERN SPECIES		RHOG (ENSCSAG00000004245)	PGAP2 (ENSCSAG00000004242)	NUP98 (ENSCSAG00000004237)	CHRNA10 (ENSCSAG00000004227)	ART1 (ENSCSAG00000004220)	ART5 (ENSCSAG00000004213)	ENSCSAG00000004211	RNF121 (ENSCSAG00000004206)	IL18BP (ENSCSAG00000004202)	NUMA1 (ENSCSAG00000004200)	LRRC51 (ENSCSAG00000004193)	LAMTOR1 (ENSCSAG00000004190)	TOMT (ENSCSAG00000004187)	ANAPC15 (ENSCSAG00000004184)	ENSCSAG00000004181 ##22	ENSCSAG00000004178 ##22	FOLR1 (ENSCSAG00000004176) ##22	ENSCSAG00000000627	FOLR2 (ENSCSAG00000004161) ##22	INPPL1 (ENSCSAG00000004156)	PHOX2A (ENSCSAG00000004141)	CLPB (ENSCSAG00000004140)	ENSCSAG00000000626	PDE2A (ENSCSAG00000004136)	ARAP1 (ENSCSAG00000004127)	STARD10 (ENSCSAG00000004111)	ATG16L2 (ENSCSAG00000004094)	FCHSD2 (ENSCSAG00000004080)	P2RY2 (ENSCSAG00000000625)	P2RY6 (ENSCSAG00000000624)	ARHGEF17 (ENSCSAG00000004075)
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000155158.i	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000155158.i	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b
Vervet Monkey	MODERN SPECIES		STIM1 (ENSCSAG00000004249)	RHOG (ENSCSAG00000004245)	PGAP2 (ENSCSAG00000004242)	NUP98 (ENSCSAG00000004237)	CHRNA10 (ENSCSAG00000004227)	ART1 (ENSCSAG00000004220)	ART5 (ENSCSAG00000004213)	ENSCSAG00000004211	RNF121 (ENSCSAG00000004206)	IL18BP (ENSCSAG00000004202)	NUMA1 (ENSCSAG00000004200)	LRRC51 (ENSCSAG00000004193)	LAMTOR1 (ENSCSAG00000004190)	TOMT (ENSCSAG00000004187)	ANAPC15 (ENSCSAG00000004184)	ENSCSAG00000004181 ##22	ENSCSAG00000004178 ##22	FOLR1 (ENSCSAG00000004176) ##22	ENSCSAG00000000627	FOLR2 (ENSCSAG00000004161) ##22	INPPL1 (ENSCSAG00000004156)	PHOX2A (ENSCSAG00000004141)	CLPB (ENSCSAG00000004140)	ENSCSAG00000000626	PDE2A (ENSCSAG00000004136)	ARAP1 (ENSCSAG00000004127)	STARD10 (ENSCSAG00000004111)	ATG16L2 (ENSCSAG00000004094)	FCHSD2 (ENSCSAG00000004080)	P2RY2 (ENSCSAG00000000625)	P2RY6 (ENSCSAG00000000624)
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00390000000214.a.a	ENSGT00940000155158.i	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b
Cercopithecinae_b	ANCESTRAL SPECIES	32	ENSGT00390000000214.a.a	ENSGT00940000155158.i	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b.h	ENSGT00390000013075.a.d	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00950000183087.A.a.b.b.g.e.b.b.a.b	ENSGT01030000234621.C.a.a.b
Cercopithecinae_d	ANCESTRAL SPECIES	27	ENSGT00390000000214.a.a	ENSGT00940000155158.i	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b.h	ENSGT00390000013075.a.d	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00950000183087.A.a.b.b.g.e.b.b.a.b
Drill	MODERN SPECIES	1114	STIM1 (ENSMLEG00000032366)	ENSMLEG00000008168	PGAP2 (ENSMLEG00000038507)	NUP98 (ENSMLEG00000043563)	CHRNA10 (ENSMLEG00000019278)	ART1 (ENSMLEG00000030716)	ART5 (ENSMLEG00000008190)	ENSMLEG00000034998	ENSMLEG00000039461	RNF121 (ENSMLEG00000043299)	IL18BP (ENSMLEG00000032241)	NUMA1 (ENSMLEG00000029680)	LAMTOR1 (ENSMLEG00000037079)	TOMT (ENSMLEG00000037107)	ANAPC15 (ENSMLEG00000044094)	ENSMLEG00000037090 ##22	ENSMLEG00000042450 ##22	FOLR1 (ENSMLEG00000030123) ##22	FOLR2 (ENSMLEG00000017682) ##22	INPPL1 (ENSMLEG00000007523)	PHOX2A (ENSMLEG00000028217)	ENSMLEG00000028161	ENSMLEG00000030118	CLPB (ENSMLEG00000015735)	PDE2A (ENSMLEG00000042765)	ARAP1 (ENSMLEG00000028377)	STARD10 (ENSMLEG00000018192)	ATG16L2 (ENSMLEG00000035462)	FCHSD2 (ENSMLEG00000038604)
Olive baboon	MODERN SPECIES	3	RHOG (ENSPANG00000014770)	PGAP2 (ENSPANG00000024371)	ENSPANG00000020108	NUP98 (ENSPANG00000004511)	CHRNA10 (ENSPANG00000007812)	ART1 (ENSPANG00000014357)	ART5 (ENSPANG00000006480)	ENSPANG00000035297	ENSPANG00000046603	ENSPANG00000005374	ENSPANG00000017476	ENSPANG00000025408	LAMTOR1 (ENSPANG00000021812)	LRTOMT (ENSPANG00000002496)	ENSPANG00000035397	ENSPANG00000016288 ##22	FOLR1 (ENSPANG00000017795) ##22	FOLR2 (ENSPANG00000050381) ##22	INPPL1 (ENSPANG00000002495)	PHOX2A (ENSPANG00000016550)	CLPB (ENSPANG00000007467)	PDE2A (ENSPANG00000015383)	ARAP1 (ENSPANG00000007955)	STARD10 (ENSPANG00000010680)	ATG16L2 (ENSPANG00000008372)	ENSPANG00000040580	ENSPANG00000039173	FCHSD2 (ENSPANG00000001966)	P2RY2 (ENSPANG00000008844)	P2RY6 (ENSPANG00000017366)	ARHGEF17 (ENSPANG00000000122)
Rhinopithecus	ANCESTRAL SPECIES	21	ENSGT00390000000214.a.a	ENSGT00940000155158.i	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Black snub-nosed monkey	MODERN SPECIES	1182	PGAP2 (ENSRBIG00000037238)	ENSRBIG00000029882	NUP98 (ENSRBIG00000042244)	CHRNA10 (ENSRBIG00000009540)	ART1 (ENSRBIG00000032899)	ART5 (ENSRBIG00000031267)	ENSRBIG00000044109	ENSRBIG00000000062	RNF121 (ENSRBIG00000038083)	IL18BP (ENSRBIG00000037256)	NUMA1 (ENSRBIG00000034317)	LAMTOR1 (ENSRBIG00000028888)	ENSRBIG00000033808	TOMT (ENSRBIG00000037486)	ENSRBIG00000040696	ENSRBIG00000039297 ##22	FOLR1 (ENSRBIG00000040144) ##22	FOLR2 (ENSRBIG00000029344) ##22	INPPL1 (ENSRBIG00000040337)	PHOX2A (ENSRBIG00000036312)	ENSRBIG00000038945	CLPB (ENSRBIG00000027633)	PDE2A (ENSRBIG00000010840)	ARAP1 (ENSRBIG00000016228)	STARD10 (ENSRBIG00000031300)	ATG16L2 (ENSRBIG00000033050)	FCHSD2 (ENSRBIG00000034018)	P2RY6 (ENSRBIG00000001344)	ARHGEF17 (ENSRBIG00000028737)	RELT (ENSRBIG00000019893)	FAM168A (ENSRBIG00000031689)
Golden snub-nosed monkey	MODERN SPECIES	1304	STIM1 (ENSRROG00000034312)	ENSRROG00000012834	NUP98 (ENSRROG00000031812)	CHRNA10 (ENSRROG00000043364)	ART1 (ENSRROG00000044951)	ART5 (ENSRROG00000039668)	ENSRROG00000043049	ENSRROG00000032358	RNF121 (ENSRROG00000002251)	IL18BP (ENSRROG00000036271)	NUMA1 (ENSRROG00000031539)	LAMTOR1 (ENSRROG00000043908)	TOMT (ENSRROG00000039719)	ENSRROG00000032455	ENSRROG00000014196	ENSRROG00000003896 ##22	FOLR1 (ENSRROG00000042045) ##22	FOLR2 (ENSRROG00000044789) ##22	INPPL1 (ENSRROG00000030610)	PHOX2A (ENSRROG00000026638)	ENSRROG00000036788	CLPB (ENSRROG00000041613)	PDE2A (ENSRROG00000042016)	ARAP1 (ENSRROG00000029375)	STARD10 (ENSRROG00000024050)	ATG16L2 (ENSRROG00000024129)	FCHSD2 (ENSRROG00000041973)	P2RY2 (ENSRROG00000025105)	P2RY6 (ENSRROG00000002754)	ARHGEF17 (ENSRROG00000041198)	RELT (ENSRROG00000042366)
Atlantogenata	ANCESTRAL SPECIES	35	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Afrotheria	ANCESTRAL SPECIES	41	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Afrotheria_a	ANCESTRAL SPECIES	71	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Elephant	MODERN SPECIES	563	PGAP2 (ENSLAFG00000013072)	NUP98 (ENSLAFG00000013055)	CHRNA10 (ENSLAFG00000013051)	ART1 (ENSLAFG00000013048)	ART5 (ENSLAFG00000013046)	ENSLAFG00000020562	RNF121 (ENSLAFG00000005579)	IL18BP (ENSLAFG00000027369)	NUMA1 (ENSLAFG00000005585)	LRRC51 (ENSLAFG00000006134)	LAMTOR1 (ENSLAFG00000006135)	TOMT (ENSLAFG00000026865)	ANAPC15 (ENSLAFG00000006138)	FOLR2 (ENSLAFG00000028071) ##22	ENSLAFG00000006141 ##22	ENSLAFG00000000928 ##22	INPPL1 (ENSLAFG00000000930)	PHOX2A (ENSLAFG00000002004)	CLPB (ENSLAFG00000011447)	ENSLAFG00000027052	PDE2A (ENSLAFG00000013489)	ARAP1 (ENSLAFG00000004476)	STARD10 (ENSLAFG00000020772)	ATG16L2 (ENSLAFG00000000256)	FCHSD2 (ENSLAFG00000000261)	ENSLAFG00000027005	ENSLAFG00000029551	ENSLAFG00000032659	ENSLAFG00000028873	P2RY2 (ENSLAFG00000007522)	P2RY6 (ENSLAFG00000026339)
Eutheria	ANCESTRAL SPECIES	3	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Atlantogenata	ANCESTRAL SPECIES	35	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Afrotheria	ANCESTRAL SPECIES	41	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Afrotheria_a	ANCESTRAL SPECIES	71	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Elephant	MODERN SPECIES	563	STIM1 (ENSLAFG00000022339)	RHOG (ENSLAFG00000013078)	PGAP2 (ENSLAFG00000013072)	NUP98 (ENSLAFG00000013055)	CHRNA10 (ENSLAFG00000013051)	ART1 (ENSLAFG00000013048)	ART5 (ENSLAFG00000013046)	ENSLAFG00000020562	RNF121 (ENSLAFG00000005579)	IL18BP (ENSLAFG00000027369)	NUMA1 (ENSLAFG00000005585)	LRRC51 (ENSLAFG00000006134)	LAMTOR1 (ENSLAFG00000006135)	TOMT (ENSLAFG00000026865)	ANAPC15 (ENSLAFG00000006138)	FOLR2 (ENSLAFG00000028071) ##22	ENSLAFG00000006141 ##22	ENSLAFG00000000928 ##22	INPPL1 (ENSLAFG00000000930)	PHOX2A (ENSLAFG00000002004)	CLPB (ENSLAFG00000011447)	ENSLAFG00000027052	PDE2A (ENSLAFG00000013489)	ARAP1 (ENSLAFG00000004476)	STARD10 (ENSLAFG00000020772)	ATG16L2 (ENSLAFG00000000256)	FCHSD2 (ENSLAFG00000000261)	ENSLAFG00000027005	ENSLAFG00000029551	ENSLAFG00000032659	ENSLAFG00000028873
Hyrax	MODERN SPECIES	8386																FOLR2 (ENSPCAG00000006382) ##22
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00510000047299	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Chiroptera	ANCESTRAL SPECIES	5	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1075	STIM1 (ENSMLUG00000003365)	RHOG (ENSMLUG00000027901)	PGAP2 (ENSMLUG00000015895)	NUP98 (ENSMLUG00000013592)	CHRNA10 (ENSMLUG00000013586)	ART1 (ENSMLUG00000013578)	ART5 (ENSMLUG00000013574)	ENSMLUG00000028388	RNF121 (ENSMLUG00000006527)	IL18BP (ENSMLUG00000029213)	NUMA1 (ENSMLUG00000014098)	LRRC51 (ENSMLUG00000014114)	LAMTOR1 (ENSMLUG00000014117)	TOMT (ENSMLUG00000025239)	ENSMLUG00000014120	ENSMLUG00000014124 ##22	FOLR1 (ENSMLUG00000014126) ##22	ENSMLUG00000014128 ##22	INPPL1 (ENSMLUG00000014132)	CLPB (ENSMLUG00000005040)	ENSMLUG00000024247	ENSMLUG00000022772	ENSMLUG00000025882	PDE2A (ENSMLUG00000015598)	ENSMLUG00000000196	STARD10 (ENSMLUG00000029324)	ATG16L2 (ENSMLUG00000000211)	FCHSD2 (ENSMLUG00000000220)	P2RY2 (ENSMLUG00000002983)
Microbat	MODERN SPECIES	1075	PGAP2 (ENSMLUG00000015895)	NUP98 (ENSMLUG00000013592)	CHRNA10 (ENSMLUG00000013586)	ART1 (ENSMLUG00000013578)	ART5 (ENSMLUG00000013574)	ENSMLUG00000028388	RNF121 (ENSMLUG00000006527)	IL18BP (ENSMLUG00000029213)	NUMA1 (ENSMLUG00000014098)	LRRC51 (ENSMLUG00000014114)	LAMTOR1 (ENSMLUG00000014117)	TOMT (ENSMLUG00000025239)	ENSMLUG00000014120	ENSMLUG00000014124 ##22	FOLR1 (ENSMLUG00000014126) ##22	ENSMLUG00000014128 ##22	INPPL1 (ENSMLUG00000014132)	CLPB (ENSMLUG00000005040)	ENSMLUG00000024247	ENSMLUG00000022772	ENSMLUG00000025882	PDE2A (ENSMLUG00000015598)	ENSMLUG00000000196	STARD10 (ENSMLUG00000029324)	ATG16L2 (ENSMLUG00000000211)	FCHSD2 (ENSMLUG00000000220)	P2RY2 (ENSMLUG00000002983)
Greater horseshoe bat	MODERN SPECIES	2	RHOG (ENSRFEG00010015335)	PGAP2 (ENSRFEG00010015357)	NUP98 (ENSRFEG00010015605)	CHRNA10 (ENSRFEG00010015924)	ART1 (ENSRFEG00010016058)	ART5 (ENSRFEG00010016096)	ENSRFEG00010016166	RNF121 (ENSRFEG00010010346)	IL18BP (ENSRFEG00010010534)	NUMA1 (ENSRFEG00010010639)	LAMTOR1 (ENSRFEG00010010839)	LRRC51 (ENSRFEG00010010949)	TOMT (ENSRFEG00010011112)	ANAPC15 (ENSRFEG00010011178)	FOLR1 (ENSRFEG00010011239) ##22	FOLR2 (ENSRFEG00010011288) ##22	INPPL1 (ENSRFEG00010011424)	PHOX2A (ENSRFEG00010011524)	CLPB (ENSRFEG00010011603)	ENSRFEG00010011712	PDE2A (ENSRFEG00010011847)	ARAP1 (ENSRFEG00010012250)	STARD10 (ENSRFEG00010013919)	ATG16L2 (ENSRFEG00010014159)	FCHSD2 (ENSRFEG00010014285)	P2RY2 (ENSRFEG00010014467)	P2RY6 (ENSRFEG00010014485)	ARHGEF17 (ENSRFEG00010014519)	RELT (ENSRFEG00010014926)	FAM168A (ENSRFEG00010014954)	PLEKHB1 (ENSRFEG00010015110)
Megabat	MODERN SPECIES	1960																FOLR2 (ENSPVAG00000002482) ##22	INPPL1 (ENSPVAG00000002483)	PHOX2A (ENSPVAG00000002492)	CLPB (ENSPVAG00000002495)	PDE2A (ENSPVAG00000002498)	ARAP1 (ENSPVAG00000002501)	STARD10 (ENSPVAG00000002503)	ATG16L2 (ENSPVAG00000002505)	FCHSD2 (ENSPVAG00000002506)
Equus	ANCESTRAL SPECIES	15	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b.e ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Donkey	DUPLICATION
Donkey	MODERN SPECIES	12	PGAP2 (ENSEASG00005000745)	NUP98 (ENSEASG00005000732)	CHRNA10 (ENSEASG00005000710)	ENSEASG00005000701	ENSEASG00005000693	ENSEASG00005000652	RNF121 (ENSEASG00005000646)	IL18BP (ENSEASG00005000642)	NUMA1 (ENSEASG00005000629)	LRRC51 (ENSEASG00005028135)	LAMTOR1 (ENSEASG00005000587)	TOMT (ENSEASG00005026047)	ANAPC15 (ENSEASG00005000567)	ENSEASG00005000538 ##22	ENSEASG00005000521 ##22	ENSEASG00005000519 ##22	INPPL1 (ENSEASG00005000512)	PHOX2A (ENSEASG00005000504)	CLPB (ENSEASG00005000496)	ENSEASG00005000491	PDE2A (ENSEASG00005000469)	ARAP1 (ENSEASG00005000447)	ATG16L2 (ENSEASG00005000424)	STARD10 (ENSEASG00005000436)	FCHSD2 (ENSEASG00005000113)	P2RY6 (ENSEASG00005023731)	ENSEASG00005032767	ARHGEF17 (ENSEASG00005017963)	RELT (ENSEASG00005017959)	FAM168A (ENSEASG00005017956)	PLEKHB1 (ENSEASG00005017949)
Donkey	MODERN SPECIES	12	STIM1 (ENSEASG00005000760)	RHOG (ENSEASG00005030666)	PGAP2 (ENSEASG00005000745)	NUP98 (ENSEASG00005000732)	CHRNA10 (ENSEASG00005000710)	ENSEASG00005000701	ENSEASG00005000693	ENSEASG00005000652	RNF121 (ENSEASG00005000646)	IL18BP (ENSEASG00005000642)	NUMA1 (ENSEASG00005000629)	LRRC51 (ENSEASG00005028135)	LAMTOR1 (ENSEASG00005000587)	TOMT (ENSEASG00005026047)	ANAPC15 (ENSEASG00005000567)	ENSEASG00005000538 ##22	ENSEASG00005000521 ##22	ENSEASG00005000519 ##22	INPPL1 (ENSEASG00005000512)	PHOX2A (ENSEASG00005000504)	CLPB (ENSEASG00005000496)	ENSEASG00005000491	PDE2A (ENSEASG00005000469)	ARAP1 (ENSEASG00005000447)	ATG16L2 (ENSEASG00005000424)	STARD10 (ENSEASG00005000436)	FCHSD2 (ENSEASG00005000113)	P2RY6 (ENSEASG00005023731)	ENSEASG00005032767	ARHGEF17 (ENSEASG00005017963)	RELT (ENSEASG00005017959)
Horse	MODERN SPECIES	28	RHOG (ENSECAG00000022965)	PGAP2 (ENSECAG00000021514)	NUP98 (ENSECAG00000015336)	ENSECAG00000055775	CHRNA10 (ENSECAG00000015284)	ART1 (ENSECAG00000015210)	ART5 (ENSECAG00000014500)	TRPC2 (ENSECAG00000013026)	XNDC1 (ENSECAG00000042118)	RNF121 (ENSECAG00000010511)	NUMA1 (ENSECAG00000023455)	LAMTOR1 (ENSECAG00000022080)	TOMT (ENSECAG00000022725)	ANAPC15 (ENSECAG00000048740)	ENSECAG00000020411 ##22	FOLR2 (ENSECAG00000018619) ##22	INPPL1 (ENSECAG00000017064)	PHOX2A (ENSECAG00000016514)	CLPB (ENSECAG00000011419)	ENSECAG00000028304	PDE2A (ENSECAG00000018696)	ARAP1 (ENSECAG00000016491)	STARD10 (ENSECAG00000015358)	ATG16L2 (ENSECAG00000013038)	FCHSD2 (ENSECAG00000011163)	P2RY2 (ENSECAG00000010577)	P2RY6 (ENSECAG00000038231)	ENSECAG00000050821	ARHGEF17 (ENSECAG00000008571)	RELT (ENSECAG00000007476)	FAM168A (ENSECAG00000006543)
Carnivora	ANCESTRAL SPECIES	21	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350
Caniformia	ANCESTRAL SPECIES	17	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Ursidae	ANCESTRAL SPECIES	15	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350
Ursus	DUPLICATION
Ursus	ANCESTRAL SPECIES	36	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.e ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
American black bear	MODERN SPECIES	762														TOMT (ENSUAMG00000027366)	ANAPC15 (ENSUAMG00000027369)	ENSUAMG00000027372 ##22	FOLR1 (ENSUAMG00000027376) ##22
Polar bear	MODERN SPECIES	302	STIM1 (ENSUMAG00000006267)	RHOG (ENSUMAG00000006269)	PGAP2 (ENSUMAG00000006272)	NUP98 (ENSUMAG00000006347)	ENSUMAG00000006975	ART5 (ENSUMAG00000006976)	ENSUMAG00000006987	ENSUMAG00000007024	RNF121 (ENSUMAG00000007033)	ENSUMAG00000007047	NUMA1 (ENSUMAG00000007185)	LRRC51 (ENSUMAG00000007796)	LAMTOR1 (ENSUMAG00000007804)	TOMT (ENSUMAG00000007809)	ANAPC15 (ENSUMAG00000007818)	ENSUMAG00000007828 ##22	FOLR1 (ENSUMAG00000007838) ##22	INPPL1 (ENSUMAG00000007967)	CLPB (ENSUMAG00000008697)	PDE2A (ENSUMAG00000008789)	ARAP1 (ENSUMAG00000009450)	STARD10 (ENSUMAG00000009981)	ATG16L2 (ENSUMAG00000010010)	FCHSD2 (ENSUMAG00000010093)	ENSUMAG00000010124	P2RY6 (ENSUMAG00000010134)	ARHGEF17 (ENSUMAG00000010147)	ENSUMAG00000010218	ENSUMAG00000010221	FAM168A (ENSUMAG00000010224)	PLEKHB1 (ENSUMAG00000010228)
Ursus	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.a.b.f ##22
American black bear	MODERN SPECIES	763																ENSUAMG00000027542 ##22	INPPL1 (ENSUAMG00000027397)	PHOX2A (ENSUAMG00000027380)
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	18	ENSAMEG00000028038	RHOG (ENSAMEG00000019447)	PGAP2 (ENSAMEG00000010996)	NUP98 (ENSAMEG00000010984)	CHRNA10 (ENSAMEG00000010978)	ENSAMEG00000010969	ENSAMEG00000010962	ENSAMEG00000010951	ENSAMEG00000010937	RNF121 (ENSAMEG00000010909)	IL18BP (ENSAMEG00000010904)	NUMA1 (ENSAMEG00000010861)	LRRC51 (ENSAMEG00000024659)	LRTOMT (ENSAMEG00000010848)	LAMTOR1 (ENSAMEG00000010854)	ENSAMEG00000010833 ##22	FOLR1 (ENSAMEG00000030130) ##22	ENSAMEG00000005691 ##22	INPPL1 (ENSAMEG00000005610)	PHOX2A (ENSAMEG00000030169)	CLPB (ENSAMEG00000005592)	PDE2A (ENSAMEG00000005473)	ARAP1 (ENSAMEG00000005419)	STARD10 (ENSAMEG00000005382)	ATG16L2 (ENSAMEG00000005345)	FCHSD2 (ENSAMEG00000005338)	ENSAMEG00000028744	ENSAMEG00000031322	P2RY2 (ENSAMEG00000020290)	P2RY6 (ENSAMEG00000020289)	ENSAMEG00000030401
Giant Panda	MODERN SPECIES	18	PGAP2 (ENSAMEG00000010996)	NUP98 (ENSAMEG00000010984)	CHRNA10 (ENSAMEG00000010978)	ENSAMEG00000010969	ENSAMEG00000010962	ENSAMEG00000010951	ENSAMEG00000010937	RNF121 (ENSAMEG00000010909)	IL18BP (ENSAMEG00000010904)	NUMA1 (ENSAMEG00000010861)	LRRC51 (ENSAMEG00000024659)	LRTOMT (ENSAMEG00000010848)	LAMTOR1 (ENSAMEG00000010854)	ENSAMEG00000010833 ##22	FOLR1 (ENSAMEG00000030130) ##22	ENSAMEG00000005691 ##22	INPPL1 (ENSAMEG00000005610)	PHOX2A (ENSAMEG00000030169)	CLPB (ENSAMEG00000005592)	PDE2A (ENSAMEG00000005473)	ARAP1 (ENSAMEG00000005419)	STARD10 (ENSAMEG00000005382)	ATG16L2 (ENSAMEG00000005345)	FCHSD2 (ENSAMEG00000005338)	ENSAMEG00000028744	ENSAMEG00000031322	P2RY2 (ENSAMEG00000020290)	P2RY6 (ENSAMEG00000020289)	ENSAMEG00000030401	ARHGEF17 (ENSAMEG00000017303)	RELT (ENSAMEG00000017300)
Mustelinae	ANCESTRAL SPECIES	25	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b	ENSGT00940000154769
American mink	DUPLICATION
American mink	DUPLICATION
American mink	MODERN SPECIES	6	RHOG (ENSNVIG00000019172)	PGAP2 (ENSNVIG00000019189)	NUP98 (ENSNVIG00000019281)	CHRNA10 (ENSNVIG00000019515)	ART1 (ENSNVIG00000019532)	ART5 (ENSNVIG00000019550)	ENSNVIG00000019569	ENSNVIG00000019681	RNF121 (ENSNVIG00000019697)	IL18BP (ENSNVIG00000019730)	NUMA1 (ENSNVIG00000019788)	LRC51 (ENSNVIG00000020391)	LAMTOR1 (ENSNVIG00000020491)	TOMT (ENSNVIG00000020502)	ANAPC15 (ENSNVIG00000020507)	ENSNVIG00000020543 ##22	ENSNVIG00000020551 ##22	FOLR1 (ENSNVIG00000020559) ##22	ENSNVIG00000020566 ##22	INPPL1 (ENSNVIG00000020582)	PHOX2A (ENSNVIG00000020687)	CLPB (ENSNVIG00000020719)	ENSNVIG00000020914	PDE2A (ENSNVIG00000020947)	ARAP1 (ENSNVIG00000021233)	STARD10 (ENSNVIG00000021483)	ENSNVIG00000021493	ATG16L2 (ENSNVIG00000021501)	FCSD2 (ENSNVIG00000021556)	P2RY2 (ENSNVIG00000021667)	P2RY6 (ENSNVIG00000021669)
American mink	MODERN SPECIES	6	PGAP2 (ENSNVIG00000019189)	NUP98 (ENSNVIG00000019281)	CHRNA10 (ENSNVIG00000019515)	ART1 (ENSNVIG00000019532)	ART5 (ENSNVIG00000019550)	ENSNVIG00000019569	ENSNVIG00000019681	RNF121 (ENSNVIG00000019697)	IL18BP (ENSNVIG00000019730)	NUMA1 (ENSNVIG00000019788)	LRC51 (ENSNVIG00000020391)	LAMTOR1 (ENSNVIG00000020491)	TOMT (ENSNVIG00000020502)	ANAPC15 (ENSNVIG00000020507)	ENSNVIG00000020543 ##22	ENSNVIG00000020551 ##22	FOLR1 (ENSNVIG00000020559) ##22	ENSNVIG00000020566 ##22	INPPL1 (ENSNVIG00000020582)	PHOX2A (ENSNVIG00000020687)	CLPB (ENSNVIG00000020719)	ENSNVIG00000020914	PDE2A (ENSNVIG00000020947)	ARAP1 (ENSNVIG00000021233)	STARD10 (ENSNVIG00000021483)	ENSNVIG00000021493	ATG16L2 (ENSNVIG00000021501)	FCSD2 (ENSNVIG00000021556)	P2RY2 (ENSNVIG00000021667)	P2RY6 (ENSNVIG00000021669)	ARHGEF17 (ENSNVIG00000021682)
American mink	MODERN SPECIES	6	CHRNA10 (ENSNVIG00000019515)	ART1 (ENSNVIG00000019532)	ART5 (ENSNVIG00000019550)	ENSNVIG00000019569	ENSNVIG00000019681	RNF121 (ENSNVIG00000019697)	IL18BP (ENSNVIG00000019730)	NUMA1 (ENSNVIG00000019788)	LRC51 (ENSNVIG00000020391)	LAMTOR1 (ENSNVIG00000020491)	TOMT (ENSNVIG00000020502)	ANAPC15 (ENSNVIG00000020507)	ENSNVIG00000020543 ##22	ENSNVIG00000020551 ##22	FOLR1 (ENSNVIG00000020559) ##22	ENSNVIG00000020566 ##22	INPPL1 (ENSNVIG00000020582)	PHOX2A (ENSNVIG00000020687)	CLPB (ENSNVIG00000020719)	ENSNVIG00000020914	PDE2A (ENSNVIG00000020947)	ARAP1 (ENSNVIG00000021233)	STARD10 (ENSNVIG00000021483)	ENSNVIG00000021493	ATG16L2 (ENSNVIG00000021501)	FCSD2 (ENSNVIG00000021556)	P2RY2 (ENSNVIG00000021667)	P2RY6 (ENSNVIG00000021669)	ARHGEF17 (ENSNVIG00000021682)	RELT (ENSNVIG00000021738)	FAM168A (ENSNVIG00000021746)
Ferret	MODERN SPECIES	294	PGAP2 (ENSMPUG00000010449)	NUP98 (ENSMPUG00000010422)	CHRNA10 (ENSMPUG00000010400)	ART1 (ENSMPUG00000010384)	ART5 (ENSMPUG00000010377)	ENSMPUG00000010374	ENSMPUG00000010369	ENSMPUG00000010361	RNF121 (ENSMPUG00000010355)	IL18BP (ENSMPUG00000010336)	NUMA1 (ENSMPUG00000010323)	LRRC51 (ENSMPUG00000010315)	LAMTOR1 (ENSMPUG00000010289)	ANAPC15 (ENSMPUG00000010260)	FOLR1 (ENSMPUG00000010228) ##22	FOLR2 (ENSMPUG00000010223) ##22	INPPL1 (ENSMPUG00000010200)	PHOX2A (ENSMPUG00000010182)	ENSMPUG00000010180	CLPB (ENSMPUG00000010173)	PDE2A (ENSMPUG00000009843)	ARAP1 (ENSMPUG00000009828)	STARD10 (ENSMPUG00000009791)	ATG16L2 (ENSMPUG00000009778)	FCHSD2 (ENSMPUG00000009765)	ENSMPUG00000009762	P2RY2 (ENSMPUG00000019536)	P2RY6 (ENSMPUG00000009759)	ARHGEF17 (ENSMPUG00000009751)	RELT (ENSMPUG00000009744)	FAM168A (ENSMPUG00000009739)
Canidae	DUPLICATION
Canidae	ANCESTRAL SPECIES	17	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b.l ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.k ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350
Canis_lupus	ANCESTRAL SPECIES	21	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b.l ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.k ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Dog	MODERN SPECIES	13	PGAP2 (ENSCAFG00845011486)	NUP98 (ENSCAFG00845011368)	CHRNA10 (ENSCAFG00845011302)	ENSCAFG00845011268	ENSCAFG00845011208	TRPC2 (ENSCAFG00845011165)	XNDC1 (ENSCAFG00845011096)	RNF121 (ENSCAFG00845010940)	NUMA1 (ENSCAFG00845010789)	LRTOMT (ENSCAFG00845010690)	LAMTOR1 (ENSCAFG00845010589)	TOMT (ENSCAFG00845010540)	ANAPC15 (ENSCAFG00845010469)	ENSCAFG00845010402 ##22	FOLR1 (ENSCAFG00845010357) ##22	ENSCAFG00845010325 ##22	INPPL1 (ENSCAFG00845010236)	PHOX2A (ENSCAFG00845010206)	CLPB (ENSCAFG00845010091)	PDE2A (ENSCAFG00845009737)	ARAP1 (ENSCAFG00845009338)	STARD10 (ENSCAFG00845009210)	ATG16L2 (ENSCAFG00845009039)	FCHSD2 (ENSCAFG00845008848)	P2RY2 (ENSCAFG00845008786)	P2RY6 (ENSCAFG00845008745)	ENSCAFG00845008725	ARHGEF17 (ENSCAFG00845008396)	RELT (ENSCAFG00845008255)	FAM168A (ENSCAFG00845008112)	PLEKHB1 (ENSCAFG00845007912)
Dingo	MODERN SPECIES	231	PGAP2 (ENSCAFG00020008711)	NUP98 (ENSCAFG00020005128)	CHRNA10 (ENSCAFG00020005002)	ART1 (ENSCAFG00020004997)	ART5 (ENSCAFG00020004990)	ENSCAFG00020004954	ENSCAFG00020004938	RNF121 (ENSCAFG00020004929)	IL18BP (ENSCAFG00020004928)	NUMA1 (ENSCAFG00020004656)	LRRC51 (ENSCAFG00020004626)	LAMTOR1 (ENSCAFG00020004625)	TOMT (ENSCAFG00020004624)	ANAPC15 (ENSCAFG00020004608)	FOLR1 (ENSCAFG00020004601) ##22	FOLR2 (ENSCAFG00020004597) ##22	ENSCAFG00020004594	INPPL1 (ENSCAFG00020003281)	PHOX2A (ENSCAFG00020003232)	CLPB (ENSCAFG00020003227)	PDE2A (ENSCAFG00020002505)	ENSCAFG00020002418	ARAP1 (ENSCAFG00020002397)	STARD10 (ENSCAFG00020002390)	ATG16L2 (ENSCAFG00020002305)	FCHSD2 (ENSCAFG00020002270)	P2RY2 (ENSCAFG00020002261)	ARHGEF17 (ENSCAFG00020002239)	RELT (ENSCAFG00020002227)	FAM168A (ENSCAFG00020002220)	PLEKHB1 (ENSCAFG00020002214)
Red fox	MODERN SPECIES	81	PGAP2 (ENSVVUG00000025679)	NUP98 (ENSVVUG00000025664)	CHRNA10 (ENSVVUG00000025660)	ART1 (ENSVVUG00000025659)	ART5 (ENSVVUG00000025657)	ENSVVUG00000025651	ENSVVUG00000025645	RNF121 (ENSVVUG00000025638)	ENSVVUG00000025635	NUMA1 (ENSVVUG00000025398)	LAMTOR1 (ENSVVUG00000025355)	LRRC51 (ENSVVUG00000025353)	ANAPC15 (ENSVVUG00000025345)	ENSVVUG00000025344 ##22	ENSVVUG00000025341 ##22	ENSVVUG00000025340 ##22	INPPL1 (ENSVVUG00000024927)	CLPB (ENSVVUG00000024879)	PDE2A (ENSVVUG00000024655)	ARAP1 (ENSVVUG00000024634)	STARD10 (ENSVVUG00000024630)	ENSVVUG00000024628	ENSVVUG00000024623	FCHSD2 (ENSVVUG00000024614)	P2RY2 (ENSVVUG00000024610)	ENSVVUG00000024605	ARHGEF17 (ENSVVUG00000024591)	RELT (ENSVVUG00000024567)	FAM168A (ENSVVUG00000024558)	PLEKHB1 (ENSVVUG00000024552)	RAB6A (ENSVVUG00000024550)
Canidae	ANCESTRAL SPECIES	17	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b.l ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.k ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182
Canis_lupus	ANCESTRAL SPECIES	21	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b.l ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.k ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B
Dog	MODERN SPECIES	13	STIM1 (ENSCAFG00845011568)	RHOG (ENSCAFG00845011526)	PGAP2 (ENSCAFG00845011486)	NUP98 (ENSCAFG00845011368)	CHRNA10 (ENSCAFG00845011302)	ENSCAFG00845011268	ENSCAFG00845011208	TRPC2 (ENSCAFG00845011165)	XNDC1 (ENSCAFG00845011096)	RNF121 (ENSCAFG00845010940)	NUMA1 (ENSCAFG00845010789)	LRTOMT (ENSCAFG00845010690)	LAMTOR1 (ENSCAFG00845010589)	TOMT (ENSCAFG00845010540)	ANAPC15 (ENSCAFG00845010469)	ENSCAFG00845010402 ##22	FOLR1 (ENSCAFG00845010357) ##22	ENSCAFG00845010325 ##22	INPPL1 (ENSCAFG00845010236)	PHOX2A (ENSCAFG00845010206)	CLPB (ENSCAFG00845010091)	PDE2A (ENSCAFG00845009737)	ARAP1 (ENSCAFG00845009338)	STARD10 (ENSCAFG00845009210)	ATG16L2 (ENSCAFG00845009039)	FCHSD2 (ENSCAFG00845008848)	P2RY2 (ENSCAFG00845008786)	P2RY6 (ENSCAFG00845008745)	ENSCAFG00845008725	ARHGEF17 (ENSCAFG00845008396)	RELT (ENSCAFG00845008255)
Red fox	MODERN SPECIES	81	STIM1 (ENSVVUG00000025709)	RHOG (ENSVVUG00000025684)	PGAP2 (ENSVVUG00000025679)	NUP98 (ENSVVUG00000025664)	CHRNA10 (ENSVVUG00000025660)	ART1 (ENSVVUG00000025659)	ART5 (ENSVVUG00000025657)	ENSVVUG00000025651	ENSVVUG00000025645	RNF121 (ENSVVUG00000025638)	ENSVVUG00000025635	NUMA1 (ENSVVUG00000025398)	LAMTOR1 (ENSVVUG00000025355)	LRRC51 (ENSVVUG00000025353)	ANAPC15 (ENSVVUG00000025345)	ENSVVUG00000025344 ##22	ENSVVUG00000025341 ##22	ENSVVUG00000025340 ##22	INPPL1 (ENSVVUG00000024927)	CLPB (ENSVVUG00000024879)	PDE2A (ENSVVUG00000024655)	ARAP1 (ENSVVUG00000024634)	STARD10 (ENSVVUG00000024630)	ENSVVUG00000024628	ENSVVUG00000024623	FCHSD2 (ENSVVUG00000024614)	P2RY2 (ENSVVUG00000024610)	ENSVVUG00000024605	ARHGEF17 (ENSVVUG00000024591)	RELT (ENSVVUG00000024567)	FAM168A (ENSVVUG00000024558)
Felidae	DUPLICATION
Felidae	ANCESTRAL SPECIES		ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b.n ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.m ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Panthera	ANCESTRAL SPECIES	23	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b.n ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.m ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Panthera_a	ANCESTRAL SPECIES	24	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b.n ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.m ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
leopard	MODERN SPECIES	17	PGAP2 (ENSPPRG00000022873)	NUP98 (ENSPPRG00000014752)	CHRNA10 (ENSPPRG00000010582)	ART1 (ENSPPRG00000009923)	ART5 (ENSPPRG00000009698)	ENSPPRG00000007040	ENSPPRG00000002481	RNF121 (ENSPPRG00000001694)	IL18BP (ENSPPRG00000000197)	NUMA1 (ENSPPRG00000023604)	LAMTOR1 (ENSPPRG00000013024)	LRRC51 (ENSPPRG00000011210)	ENSPPRG00000009205	ENSPPRG00000005948 ##22	FOLR1 (ENSPPRG00000005454) ##22	ENSPPRG00000004560 ##22	INPPL1 (ENSPPRG00000003083)	PHOX2A (ENSPPRG00000001283)	CLPB (ENSPPRG00000000557)	PDE2A (ENSPPRG00000023412)	ARAP1 (ENSPPRG00000008707)	STARD10 (ENSPPRG00000001129)	ATG16L2 (ENSPPRG00000000060)	FCHSD2 (ENSPPRG00000022831)	ENSPPRG00000020298	P2RY2 (ENSPPRG00000020257)	P2RY6 (ENSPPRG00000020229)	ARHGEF17 (ENSPPRG00000014870)	RELT (ENSPPRG00000013581)	FAM168A (ENSPPRG00000013109)	ENSPPRG00000012396
Tiger	MODERN SPECIES	152		ENSPTIG00000014923	CHRNA10 (ENSPTIG00000013924)	ART1 (ENSPTIG00000013219)	ART5 (ENSPTIG00000011272)	ENSPTIG00000010671	ENSPTIG00000006066	RNF121 (ENSPTIG00000021115)	IL18BP (ENSPTIG00000017522)	ENSPTIG00000022066	LAMTOR1 (ENSPTIG00000021978)	LRRC51 (ENSPTIG00000018565)	ANAPC15 (ENSPTIG00000010352)	ENSPTIG00000008701 ##22	FOLR1 (ENSPTIG00000006891) ##22	ENSPTIG00000003296 ##22	INPPL1 (ENSPTIG00000014051)	CLPB (ENSPTIG00000010499)	PDE2A (ENSPTIG00000015974)	ARAP1 (ENSPTIG00000012516)	STARD10 (ENSPTIG00000009966)	ATG16L2 (ENSPTIG00000007319)	FCHSD2 (ENSPTIG00000020988)	ENSPTIG00000007385	ARHGEF17 (ENSPTIG00000016554)	RELT (ENSPTIG00000015677)	FAM168A (ENSPTIG00000014083)	PLEKHB1 (ENSPTIG00000011036)	RAB6A (ENSPTIG00000007843)	MRPL48 (ENSPTIG00000020025)	COA4 (ENSPTIG00000007215)
Cat	MODERN SPECIES	241	NUP98 (ENSFCAG00000003741)	CHRNA10 (ENSFCAG00000023105)	ART1 (ENSFCAG00000031838)	ART5 (ENSFCAG00000031739)	TRPC2 (ENSFCAG00000026180)	XNDC1 (ENSFCAG00000044053)	RNF121 (ENSFCAG00000005315)	IL18BP (ENSFCAG00000040011)	NUMA1 (ENSFCAG00000005317)	LRRC51 (ENSFCAG00000005319)	LAMTOR1 (ENSFCAG00000005320)	TOMT (ENSFCAG00000043134)	ANAPC15 (ENSFCAG00000005321)	ENSFCAG00000006996 ##22	FOLR1 (ENSFCAG00000036714) ##22	ENSFCAG00000033570 ##22	INPPL1 (ENSFCAG00000005323)	PHOX2A (ENSFCAG00000005324)	CLPB (ENSFCAG00000005325)	PDE2A (ENSFCAG00000013190)	ARAP1 (ENSFCAG00000013192)	STARD10 (ENSFCAG00000026356)	ATG16L2 (ENSFCAG00000013194)	FCHSD2 (ENSFCAG00000031954)	ENSFCAG00000034489	P2RY2 (ENSFCAG00000032749)	P2RY6 (ENSFCAG00000035630)	ARHGEF17 (ENSFCAG00000002868)	RELT (ENSFCAG00000002869)	FAM168A (ENSFCAG00000037723)	PLEKHB1 (ENSFCAG00000004490)
Felidae	ANCESTRAL SPECIES		ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b.n ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.m ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Panthera	ANCESTRAL SPECIES	23	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b.n ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.m ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Tiger	MODERN SPECIES	152				ENSPTIG00000014923	CHRNA10 (ENSPTIG00000013924)	ART1 (ENSPTIG00000013219)	ART5 (ENSPTIG00000011272)	ENSPTIG00000010671	ENSPTIG00000006066	RNF121 (ENSPTIG00000021115)	IL18BP (ENSPTIG00000017522)	ENSPTIG00000022066	LAMTOR1 (ENSPTIG00000021978)	LRRC51 (ENSPTIG00000018565)	ANAPC15 (ENSPTIG00000010352)	ENSPTIG00000008701 ##22	FOLR1 (ENSPTIG00000006891) ##22	ENSPTIG00000003296 ##22	INPPL1 (ENSPTIG00000014051)	CLPB (ENSPTIG00000010499)	PDE2A (ENSPTIG00000015974)	ARAP1 (ENSPTIG00000012516)	STARD10 (ENSPTIG00000009966)	ATG16L2 (ENSPTIG00000007319)	FCHSD2 (ENSPTIG00000020988)	ENSPTIG00000007385	ARHGEF17 (ENSPTIG00000016554)	RELT (ENSPTIG00000015677)	FAM168A (ENSPTIG00000014083)	PLEKHB1 (ENSPTIG00000011036)	RAB6A (ENSPTIG00000007843)
Panthera_a	ANCESTRAL SPECIES	24	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b.n ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.m ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
leopard	MODERN SPECIES	17	STIM1 (ENSPPRG00000001677)	RHOG (ENSPPRG00000015051)	PGAP2 (ENSPPRG00000022873)	NUP98 (ENSPPRG00000014752)	CHRNA10 (ENSPPRG00000010582)	ART1 (ENSPPRG00000009923)	ART5 (ENSPPRG00000009698)	ENSPPRG00000007040	ENSPPRG00000002481	RNF121 (ENSPPRG00000001694)	IL18BP (ENSPPRG00000000197)	NUMA1 (ENSPPRG00000023604)	LAMTOR1 (ENSPPRG00000013024)	LRRC51 (ENSPPRG00000011210)	ENSPPRG00000009205	ENSPPRG00000005948 ##22	FOLR1 (ENSPPRG00000005454) ##22	ENSPPRG00000004560 ##22	INPPL1 (ENSPPRG00000003083)	PHOX2A (ENSPPRG00000001283)	CLPB (ENSPPRG00000000557)	PDE2A (ENSPPRG00000023412)	ARAP1 (ENSPPRG00000008707)	STARD10 (ENSPPRG00000001129)	ATG16L2 (ENSPPRG00000000060)	FCHSD2 (ENSPPRG00000022831)	ENSPPRG00000020298	P2RY2 (ENSPPRG00000020257)	P2RY6 (ENSPPRG00000020229)	ARHGEF17 (ENSPPRG00000014870)	RELT (ENSPPRG00000013581)
lion	MODERN SPECIES	10	PGAP2 (ENSPLOG00000014136)	NUP98 (ENSPLOG00000014019)	CHRNA10 (ENSPLOG00000013799)	ART1 (ENSPLOG00000013731)	ART5 (ENSPLOG00000013634)	ENSPLOG00000013405	ENSPLOG00000013320	RNF121 (ENSPLOG00000013183)	IL18BP (ENSPLOG00000013073)	NUMA1 (ENSPLOG00000012852)	LRRC51 (ENSPLOG00000012646)	LAMTOR1 (ENSPLOG00000012386)	TOMT (ENSPLOG00000012315)	ANAPC15 (ENSPLOG00000012268)	FOLR1 (ENSPLOG00000012134) ##22	FOLR2 (ENSPLOG00000012003) ##22	INPPL1 (ENSPLOG00000011628)	PHOX2A (ENSPLOG00000011573)	CLPB (ENSPLOG00000011134)	PDE2A (ENSPLOG00000010134)	ARAP1 (ENSPLOG00000009729)	STARD10 (ENSPLOG00000009602)	ATG16L2 (ENSPLOG00000009517)	FCHSD2 (ENSPLOG00000009289)	ENSPLOG00000009165	P2RY2 (ENSPLOG00000009141)	P2RY6 (ENSPLOG00000009126)	ARHGEF17 (ENSPLOG00000008864)	RELT (ENSPLOG00000008764)	FAM168A (ENSPLOG00000008699)	PLEKHB1 (ENSPLOG00000008496)
Cat	MODERN SPECIES	241	RHOG (ENSFCAG00000003744)	PGAP2 (ENSFCAG00000003743)	NUP98 (ENSFCAG00000003741)	CHRNA10 (ENSFCAG00000023105)	ART1 (ENSFCAG00000031838)	ART5 (ENSFCAG00000031739)	TRPC2 (ENSFCAG00000026180)	XNDC1 (ENSFCAG00000044053)	RNF121 (ENSFCAG00000005315)	IL18BP (ENSFCAG00000040011)	NUMA1 (ENSFCAG00000005317)	LRRC51 (ENSFCAG00000005319)	LAMTOR1 (ENSFCAG00000005320)	TOMT (ENSFCAG00000043134)	ANAPC15 (ENSFCAG00000005321)	ENSFCAG00000006996 ##22	FOLR1 (ENSFCAG00000036714) ##22	ENSFCAG00000033570 ##22	INPPL1 (ENSFCAG00000005323)	PHOX2A (ENSFCAG00000005324)	CLPB (ENSFCAG00000005325)	PDE2A (ENSFCAG00000013190)	ARAP1 (ENSFCAG00000013192)	STARD10 (ENSFCAG00000026356)	ATG16L2 (ENSFCAG00000013194)	FCHSD2 (ENSFCAG00000031954)	ENSFCAG00000034489	P2RY2 (ENSFCAG00000032749)	P2RY6 (ENSFCAG00000035630)	ARHGEF17 (ENSFCAG00000002868)	RELT (ENSFCAG00000002869)
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Suina	ANCESTRAL SPECIES	5	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b	ENSGT00940000154769
Pig	MODERN SPECIES	17	ART5 (ENSSSCG00000062852)	ENSSSCG00000014799	ENSSSCG00000048448	ENSSSCG00000048507	RNF121 (ENSSSCG00000023796)	ENSSSCG00000014800	NUMA1 (ENSSSCG00000014802)	LRRC51 (ENSSSCG00000014803)	LAMTOR1 (ENSSSCG00000014804)	TOMT (ENSSSCG00000014805)	ANAPC15 (ENSSSCG00000014806)	ENSSSCG00000061202	ENSSSCG00000036853	ENSSSCG00000022236 ##22	ENSSSCG00000053501 ##22	FOLR2 (ENSSSCG00000014812) ##22	INPPL1 (ENSSSCG00000014811)	PHOX2A (ENSSSCG00000014813)	CLPB (ENSSSCG00000036887)	PDE2A (ENSSSCG00000029388)	ARAP1 (ENSSSCG00000014817)	STARD10 (ENSSSCG00000014818)	ATG16L2 (ENSSSCG00000014819)	FCHSD2 (ENSSSCG00000014820)	P2RY2 (ENSSSCG00000040207)	P2RY6 (ENSSSCG00000014823)	ENSSSCG00000014822	RELT (ENSSSCG00000014825)	FAM168A (ENSSSCG00000039996)	ENSSSCG00000044826	PLEKHB1 (ENSSSCG00000014827)
Chacoan peccary	MODERN SPECIES	32	CHRNA10 (ENSCWAG00000000400)	ART1 (ENSCWAG00000000381)	ART5 (ENSCWAG00000000367)	ENSCWAG00000000298	ENSCWAG00000000261	ENSCWAG00000000254	RNF121 (ENSCWAG00000000171)	ENSCWAG00000000114	NUMA1 (ENSCWAG00000000058)	LRRC51 (ENSCWAG00000000017)	LAMTOR1 (ENSCWAG00000006187)	TOMT (ENSCWAG00000006156)	ANAPC15 (ENSCWAG00000006136)	ENSCWAG00000006114 ##22	ENSCWAG00000006091 ##22	FOLR2 (ENSCWAG00000006053) ##22	INPPL1 (ENSCWAG00000005975)	PHOX2A (ENSCWAG00000005947)	CLPB (ENSCWAG00000005766)	PDE2A (ENSCWAG00000004293)	ARAP1 (ENSCWAG00000003270)	STARD10 (ENSCWAG00000003131)	ATG16L2 (ENSCWAG00000003106)	FCHSD2 (ENSCWAG00000003033)	P2RY2 (ENSCWAG00000003004)	P2RY6 (ENSCWAG00000002997)	ARHGEF17 (ENSCWAG00000002950)	RELT (ENSCWAG00000002926)	FAM168A (ENSCWAG00000002905)	PLEKHB1 (ENSCWAG00000002733)	RAB6A (ENSCWAG00000002639)
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Pecora	ANCESTRAL SPECIES	7	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b.b.a.a	ENSGT01030000234601.c.b.b.a.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Percora_a	ANCESTRAL SPECIES	6	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b.b.a.a	ENSGT01030000234601.c.b.b.a.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Bovidae	ANCESTRAL SPECIES	6	ENSGT01030000234601.c.a.a.m	ENSGT01030000234601.c.b.b.b.a.a	ENSGT01030000234601.c.b.b.a.a	ENSGT01030000234601.c.b.b.b.a.b	ENSGT01030000234601.c.b.b.a.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00970000197645	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Caprinae	ANCESTRAL SPECIES	6	ENSGT01030000234601.c.a.a.m	ENSGT01030000234601.c.b.b.b.a.a	ENSGT01030000234601.c.b.b.a.a	ENSGT01030000234601.c.b.b.b.a.b	ENSGT01030000234601.c.b.b.a.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00970000197645	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Goat	MODERN SPECIES	6	ENSCHIG00000027131	ENSCHIG00000003722	ENSCHIG00000025475	ENSCHIG00000025150	ENSCHIG00000014777	ENSCHIG00000024154	RNF121 (ENSCHIG00000007617)	IL18BP (ENSCHIG00000011992)	NUMA1 (ENSCHIG00000007762)	LRRC51 (ENSCHIG00000020218)	LAMTOR1 (ENSCHIG00000012939)	TOMT (ENSCHIG00000017138)	ANAPC15 (ENSCHIG00000025108)	ENSCHIG00000026821 ##22	ENSCHIG00000021169 ##22	FOLR2 (ENSCHIG00000012684) ##22	INPPL1 (ENSCHIG00000015058)	PHOX2A (ENSCHIG00000017888)	CLPB (ENSCHIG00000027032)	PDE2A (ENSCHIG00000016802)	ENSCHIG00000024882	GLB1L3 (ENSCHIG00000022494)	ENSCHIG00000011110	ACAD8 (ENSCHIG00000011486)	THYN1 (ENSCHIG00000014867)	VPS26B (ENSCHIG00000017731)	ENSCHIG00000003542	ARAP1 (ENSCHIG00000015180)	STARD10 (ENSCHIG00000013843)	ATG16L2 (ENSCHIG00000001510)	FCHSD2 (ENSCHIG00000007132)
Rambouillet Sheep	MODERN SPECIES	6	ENSOARG00020013614	ENSOARG00020013697	ENSOARG00020013752	ENSOARG00020013793	ENSOARG00020013849	ENSOARG00020014066	RNF121 (ENSOARG00020016264)	IL18BP (ENSOARG00020016566)	NUMA1 (ENSOARG00020016627)	LAMTOR1 (ENSOARG00020016969)	LRRC51 (ENSOARG00020017145)	TOMT (ENSOARG00020017336)	ENSOARG00020017387	ENSOARG00020017479 ##22	ENSOARG00020017508 ##22	FOLR2 (ENSOARG00020017568) ##22	ENSOARG00020017600	INPPL1 (ENSOARG00020017642)	PHOX2A (ENSOARG00020018005)	CLPB (ENSOARG00020018065)	PDE2A (ENSOARG00020018348)	ARAP1 (ENSOARG00020020836)	STARD10 (ENSOARG00020022516)	ATG16L2 (ENSOARG00020022612)	FCHSD2 (ENSOARG00020022738)	P2RY2 (ENSOARG00020023482)	P2RY6 (ENSOARG00020023489)	ARHGEF17 (ENSOARG00020023502)	RELT (ENSOARG00020023665)	FAM168A (ENSOARG00020023710)	ENSOARG00020023835
Bovinae	ANCESTRAL SPECIES	26	ENSGT01030000234601.c.a.a.m	ENSGT01030000234601.c.b.b.b.a.a.b	ENSGT01030000234601.c.b.b.a.a	ENSGT01030000234601.c.b.b.b.a.b	ENSGT01030000234601.c.b.b.a.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00970000197645	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Bos	ANCESTRAL SPECIES	25	ENSGT01030000234601.c.a.a.m	ENSGT01030000234601.c.b.b.b.a.a.b	ENSGT01030000234601.c.b.b.a.a	ENSGT01030000234601.c.b.b.b.a.b	ENSGT01030000234601.c.b.b.a.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00970000197645	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Bos_b	ANCESTRAL SPECIES	40	ENSGT01030000234601.c.b.b.b.a.a.b	ENSGT01030000234601.c.b.b.a.a.a	ENSGT01030000234601.c.b.b.b.a.b	ENSGT01030000234601.c.b.b.a.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT01100000263481.n.a.a.a.b.a.a.a.a.b.a.b.a.a.a	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00970000197645	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Cow	MODERN SPECIES	6	ENSBTAG00000049953	ENSBTAG00000037826	ENSBTAG00000053949	ENSBTAG00000026796	ENSBTAG00000011549	RNF121 (ENSBTAG00000014167)	ENSBTAG00000049608	IL18BP (ENSBTAG00000027676)	NUMA1 (ENSBTAG00000018449)	LRRC51 (ENSBTAG00000017964)	LAMTOR1 (ENSBTAG00000003001)	TOMT (ENSBTAG00000003000)	ANAPC15 (ENSBTAG00000002999)	FOLR3 (ENSBTAG00000038532) ##22	FOLR1 (ENSBTAG00000021007) ##22	FOLR2 (ENSBTAG00000027684) ##22	ENSBTAG00000051491	INPPL1 (ENSBTAG00000019167)	PHOX2A (ENSBTAG00000019168)	CLPB (ENSBTAG00000001280)	PDE2A (ENSBTAG00000008419)	ENSBTAG00000050827	ARAP1 (ENSBTAG00000002051)	STARD10 (ENSBTAG00000015182)	ATG16L2 (ENSBTAG00000019059)	FCHSD2 (ENSBTAG00000019062)	P2RY2 (ENSBTAG00000039050)	P2RY6 (ENSBTAG00000038737)	ARHGEF17 (ENSBTAG00000012505)	RELT (ENSBTAG00000016494)	FAM168A (ENSBTAG00000016497)
American bison	MODERN SPECIES	3200	CHRNA10 (ENSBBBG00000013024)	ART1 (ENSBBBG00000013016)	ENSBBBG00000013002	ENSBBBG00000002587	ENSBBBG00000012985	ENSBBBG00000002576	RNF121 (ENSBBBG00000012902)	IL18BP (ENSBBBG00000012868)	NUMA1 (ENSBBBG00000012845)	LAMTOR1 (ENSBBBG00000012734)	LRRC51 (ENSBBBG00000002448)	TOMT (ENSBBBG00000012645)	ENSBBBG00000012636	ENSBBBG00000002417 ##22	ENSBBBG00000002412 ##22	FOLR2 (ENSBBBG00000002404) ##22	INPPL1 (ENSBBBG00000012547)	PHOX2A (ENSBBBG00000012496)	CLPB (ENSBBBG00000012470)	ENSBBBG00000012367	PDE2A (ENSBBBG00000012341)	ARAP1 (ENSBBBG00000012109)	STARD10 (ENSBBBG00000011810)	ATG16L2 (ENSBBBG00000011797)	FCHSD2 (ENSBBBG00000011759)	P2RY2 (ENSBBBG00000002152)	P2RY6 (ENSBBBG00000011676)	ARHGEF17 (ENSBBBG00000011654)	ENSBBBG00000002129	FAM168A (ENSBBBG00000002126)
Siberian musk deer	MODERN SPECIES	1173	CHRNA10 (ENSMMSG00000016794)	ART1 (ENSMMSG00000016761)	ENSMMSG00000016747	ENSMMSG00000016729	ENSMMSG00000016420	ENSMMSG00000014886	RNF121 (ENSMMSG00000014810)	IL18BP (ENSMMSG00000014781)	NUMA1 (ENSMMSG00000014564)	LRRC51 (ENSMMSG00000014508)	LAMTOR1 (ENSMMSG00000014476)	TOMT (ENSMMSG00000014459)	ANAPC15 (ENSMMSG00000014442)	ENSMMSG00000014429 ##22	ENSMMSG00000014412 ##22	FOLR2 (ENSMMSG00000014377) ##22	INPPL1 (ENSMMSG00000014225)	PHOX2A (ENSMMSG00000014186)	CLPB (ENSMMSG00000014071)	ENSMMSG00000014028	PDE2A (ENSMMSG00000013684)	ARAP1 (ENSMMSG00000013210)	STARD10 (ENSMMSG00000013122)	ATG16L2 (ENSMMSG00000013029)	FCHSD2 (ENSMMSG00000012938)	P2RY2 (ENSMMSG00000012914)	P2RY6 (ENSMMSG00000012905)	ARHGEF17 (ENSMMSG00000012780)	RELT (ENSMMSG00000012747)	FAM168A (ENSMMSG00000012683)	PLEKHB1 (ENSMMSG00000012555)
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Odontoceti	ANCESTRAL SPECIES	4	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b	ENSGT00940000154769
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b	ENSGT00940000154769
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b	ENSGT00940000154769
Monodontidae	ANCESTRAL SPECIES	2	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b	ENSGT00940000154769
Narwhal	MODERN SPECIES	314	RHOG (ENSMMNG00015019478)	PGAP2 (ENSMMNG00015019422)	NUP98 (ENSMMNG00015019329)	CHRNA10 (ENSMMNG00015019263)	ART1 (ENSMMNG00015019236)	ART5 (ENSMMNG00015019216)	ENSMMNG00015019184	RNF121 (ENSMMNG00015019068)	IL18BP (ENSMMNG00015019016)	NUMA1 (ENSMMNG00015018750)	LRRC51 (ENSMMNG00015018657)	ENSMMNG00015018617	TOMT (ENSMMNG00015018585)	ANAPC15 (ENSMMNG00015018557)	ENSMMNG00015018527 ##22	FOLR2 (ENSMMNG00015018497) ##22	INPPL1 (ENSMMNG00015018418)	PHOX2A (ENSMMNG00015018393)	CLPB (ENSMMNG00015018273)	PDE2A (ENSMMNG00015017771)	ARAP1 (ENSMMNG00015017106)	STARD10 (ENSMMNG00015016937)	ATG16L2 (ENSMMNG00015016662)	FCHSD2 (ENSMMNG00015016529)	P2RY2 (ENSMMNG00015016460)	P2RY6 (ENSMMNG00015016438)	ARHGEF17 (ENSMMNG00015016352)	RELT (ENSMMNG00015016271)	FAM168A (ENSMMNG00015016125)	PLEKHB1 (ENSMMNG00015015978)	ENSMMNG00015015911
Vaquita	MODERN SPECIES	19	STIM1 (ENSPSNG00000007692)	RHOG (ENSPSNG00000007639)	PGAP2 (ENSPSNG00000007538)	NUP98 (ENSPSNG00000007355)	CHRNA10 (ENSPSNG00000007246)	ART5 (ENSPSNG00000007093)	ENSPSNG00000006971	RNF121 (ENSPSNG00000006829)	IL18BP (ENSPSNG00000006755)	NUMA1 (ENSPSNG00000006651)	LRRC51 (ENSPSNG00000012109)	TOMT (ENSPSNG00000012048)	LAMTOR1 (ENSPSNG00000011884)	ENSPSNG00000011772 ##22	FOLR1 (ENSPSNG00000011710) ##22	FOLR2 (ENSPSNG00000011600) ##22	INPPL1 (ENSPSNG00000011413)	PHOX2A (ENSPSNG00000011331)	CLPB (ENSPSNG00000011155)	ENSPSNG00000010947	PDE2A (ENSPSNG00000010112)	ARAP1 (ENSPSNG00000009314)	STARD10 (ENSPSNG00000008954)	ATG16L2 (ENSPSNG00000008907)	FCHSD2 (ENSPSNG00000008732)	P2RY2 (ENSPSNG00000008662)	P2RY6 (ENSPSNG00000008640)	ARHGEF17 (ENSPSNG00000008413)	RELT (ENSPSNG00000008355)	FAM168A (ENSPSNG00000008263)	PLEKHB1 (ENSPSNG00000008110)
Dolphin	MODERN SPECIES	1599																FOLR2 (ENSTTRG00000009939) ##22	INPPL1 (ENSTTRG00000009944)	PHOX2A (ENSTTRG00000009967)	CLPB (ENSTTRG00000009974)
Sperm whale	MODERN SPECIES	7	ENSPCTG00005021334	ENSPCTG00005021108	ENSPCTG00005020598	TRIM21 (ENSPCTG00005020532)	ENSPCTG00005020522	ENSPCTG00005020506	RRM1 (ENSPCTG00005020416)	STIM1 (ENSPCTG00005020347)	ENSPCTG00005020304	RNF121 (ENSPCTG00005020223)	IL18BP (ENSPCTG00005020194)	NUMA1 (ENSPCTG00005020137)	ENSPCTG00005020112	ENSPCTG00005020083 ##22	FOLR1 (ENSPCTG00005020027) ##22	FOLR2 (ENSPCTG00005019879) ##22	INPPL1 (ENSPCTG00005019784)	PHOX2A (ENSPCTG00005019740)	CLPB (ENSPCTG00005019599)	FCHSD2 (ENSPCTG00005019385)	ATG16L2 (ENSPCTG00005019127)	STARD10 (ENSPCTG00005019006)	P2RY6 (ENSPCTG00005018990)	PDE2A (ENSPCTG00005017229)	ENSPCTG00005017089	PLEKHB1 (ENSPCTG00005016848)	RAB6A (ENSPCTG00005016426)	ENSPCTG00005016368	MRPL48 (ENSPCTG00005016115)	COA4 (ENSPCTG00005016081)	PAAF1 (ENSPCTG00005016004)
Blue whale	MODERN SPECIES	19	CHRNA10 (ENSBMSG00010020235)	ART1 (ENSBMSG00010020205)	ART5 (ENSBMSG00010020191)	ENSBMSG00010020160	ENSBMSG00010020144	ENSBMSG00010020130	ENSBMSG00010020113	RNF121 (ENSBMSG00010019983)	IL18BP (ENSBMSG00010019943)	NUMA1 (ENSBMSG00010019817)	LRRC51 (ENSBMSG00010019723)	TOMT (ENSBMSG00010019695)	LAMTOR1 (ENSBMSG00010019653)	ENSBMSG00010019619 ##22	FOLR1 (ENSBMSG00010019603) ##22	FOLR2 (ENSBMSG00010019571) ##22	INPPL1 (ENSBMSG00010019507)	PHOX2A (ENSBMSG00010019476)	CLPB (ENSBMSG00010019411)	ENSBMSG00010019360	PDE2A (ENSBMSG00010017836)	ARAP1 (ENSBMSG00010015454)	STARD10 (ENSBMSG00010015245)	ATG16L2 (ENSBMSG00010015158)	FCHSD2 (ENSBMSG00010015023)	P2RY2 (ENSBMSG00010014980)	P2RY6 (ENSBMSG00010014966)	ARHGEF17 (ENSBMSG00010014835)	RELT (ENSBMSG00010014757)	FAM168A (ENSBMSG00010014681)	PLEKHB1 (ENSBMSG00010014530)
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00940000161220	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350
Primates	ANCESTRAL SPECIES		ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000161220	ENSGT00390000000938.p.b	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000018423.a
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000018423.a
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00510000047925	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00990000205266	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00510000047925	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Gorilla	MODERN SPECIES	2	ENSGGOG00000038292	KRTAP5-10 (ENSGGOG00000016395)	ENSGGOG00000036265	DEFB108B (ENSGGOG00000028100)	DEFB130A (ENSGGOG00000003692)	ENSGGOG00000027132	RNF121 (ENSGGOG00000016954)	IL18BP (ENSGGOG00000016963)	NUMA1 (ENSGGOG00000016968)	TOMT (ENSGGOG00000012492)	LAMTOR1 (ENSGGOG00000012495)	ENSGGOG00000012501	FOLR3 (ENSGGOG00000003944) ##22	ENSGGOG00000038422 ##22	FOLR1 (ENSGGOG00000005569) ##22	FOLR2 (ENSGGOG00000011292) ##22	INPPL1 (ENSGGOG00000011295)	PHOX2A (ENSGGOG00000011309)	ENSGGOG00000022254	CLPB (ENSGGOG00000006057)	PDE2A (ENSGGOG00000014611)	ARAP1 (ENSGGOG00000007805)	STARD10 (ENSGGOG00000012452)	ATG16L2 (ENSGGOG00000003472)	FCHSD2 (ENSGGOG00000034994)	P2RY2 (ENSGGOG00000012903)	P2RY6 (ENSGGOG00000008068)	ARHGEF17 (ENSGGOG00000010255)	RELT (ENSGGOG00000010271)	FAM168A (ENSGGOG00000010281)	PLEKHB1 (ENSGGOG00000011695)
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00390000010152	ENSGT00990000205266	ENSGT00940000160995.b.e.a	ENSGT00390000001538.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b	ENSGT00940000154769
Pan	ANCESTRAL SPECIES	1	ENSGT00910000144208.g.a	ENSGT00940000163626.f.b	ENSGT00390000009472.b.b	ENSGT00940000160995.b.e.a	ENSGT00390000001538.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00910000144184.q.a.h	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Bonobo	MODERN SPECIES	2	NADSYN1 (ENSPPAG00000001380)	ENSPPAG00000044001	ENSPPAG00000029134	ENSPPAG00000035835	ENSPPAG00000040916	ENSPPAG00000012937	RNF121 (ENSPPAG00000033091)	IL18BP (ENSPPAG00000037702)	NUMA1 (ENSPPAG00000030445)	LAMTOR1 (ENSPPAG00000040943)	TOMT (ENSPPAG00000031661)	ENSPPAG00000018102	FOLR3 (ENSPPAG00000044084) ##22	ENSPPAG00000044083 ##22	FOLR1 (ENSPPAG00000030512) ##22	FOLR2 (ENSPPAG00000034921) ##22	INPPL1 (ENSPPAG00000044079)	ENSPPAG00000033151	ENSPPAG00000030469	ENSPPAG00000043414	CLPB (ENSPPAG00000016490)	PDE2A (ENSPPAG00000037525)	ARAP1 (ENSPPAG00000037129)	STARD10 (ENSPPAG00000038765)	ATG16L2 (ENSPPAG00000042061)	ENSPPAG00000042264	ENSPPAG00000043302	P2RY2 (ENSPPAG00000025105)	P2RY6 (ENSPPAG00000023392)	ARHGEF17 (ENSPPAG00000032495)	RELT (ENSPPAG00000030906)
Chimpanzee	MODERN SPECIES	2	ENSPTRG00000049924	ENSPTRG00000050141	ENSPTRG00000028485	DEFB130 (ENSPTRG00000032474)	DEFB131B (ENSPTRG00000050172)	XNDC1N (ENSPTRG00000023860)	RNF121 (ENSPTRG00000004021)	IL18BP (ENSPTRG00000004022)	NUMA1 (ENSPTRG00000004023)	LAMTOR1 (ENSPTRG00000004024)	LRTOMT (ENSPTRG00000004025)	ENSPTRG00000046097	FOLR3 (ENSPTRG00000004027) ##22	ENSPTRG00000045624 ##22	FOLR1 (ENSPTRG00000004029) ##22	FOLR2 (ENSPTRG00000004030) ##22	INPPL1 (ENSPTRG00000004031)	PHOX2A (ENSPTRG00000004032)	ENSPTRG00000043331	ENSPTRG00000045377	CLPB (ENSPTRG00000004035)	PDE2A (ENSPTRG00000004036)	ARAP1 (ENSPTRG00000034443)	STARD10 (ENSPTRG00000004038)	ATG16L2 (ENSPTRG00000004039)	FCHSD2 (ENSPTRG00000004040)	ENSPTRG00000045147	P2RY2 (ENSPTRG00000004042)	P2RY6 (ENSPTRG00000004043)	ARHGEF17 (ENSPTRG00000049905)	RELT (ENSPTRG00000004045)
Human	MODERN SPECIES	2	KRTAP5-10 (ENSG00000204572)	KRTAP5-11 (ENSG00000204571)	DEFB108B (ENSG00000184276)	XNDC1N (ENSG00000254469)	DEFB131B (ENSG00000225805)	RNF121 (ENSG00000137522)	IL18BP (ENSG00000137496)	NUMA1 (ENSG00000137497)	LRTOMT (ENSG00000284922)	LRRC51 (ENSG00000184154)	LAMTOR1 (ENSG00000149357)	TOMT (ENSG00000284844)	ANAPC15 (ENSG00000110200)	FOLR3 (ENSG00000110203) ##22	FOLR1 (ENSG00000110195) ##22	FOLR2 (ENSG00000165457) ##22	INPPL1 (ENSG00000165458)	PHOX2A (ENSG00000165462)	CLPB (ENSG00000162129)	PDE2A (ENSG00000186642)	ARAP1 (ENSG00000186635)	STARD10 (ENSG00000214530)	ATG16L2 (ENSG00000168010)	FCHSD2 (ENSG00000137478)	P2RY2 (ENSG00000175591)	P2RY6 (ENSG00000171631)	ARHGEF17 (ENSG00000110237)	RELT (ENSG00000054967)	FAM168A (ENSG00000054965)	PLEKHB1 (ENSG00000021300)	RAB6A (ENSG00000175582)
Orangutan	MODERN SPECIES	2	PGAP2 (ENSPPYG00000038940)	NUP98 (ENSPPYG00000003631)	CHRNA10 (ENSPPYG00000003632)	ART1 (ENSPPYG00000003633)	ART5 (ENSPPYG00000003634)	XNDC1 (ENSPPYG00000003638)	RNF121 (ENSPPYG00000003640)	IL18BP (ENSPPYG00000003641)	NUMA1 (ENSPPYG00000003642)	LRTOMT (ENSPPYG00000029740)	LAMTOR1 (ENSPPYG00000003645)	ENSPPYG00000003646	FOLR3 (ENSPPYG00000003647) ##22	ENSPPYG00000033361 ##22	FOLR1 (ENSPPYG00000030155) ##22	FOLR2 (ENSPPYG00000003648) ##22	INPPL1 (ENSPPYG00000003649)	PHOX2A (ENSPPYG00000003650)	CLPB (ENSPPYG00000003651)	PDE2A (ENSPPYG00000003652)	ARAP1 (ENSPPYG00000003653)	ENSPPYG00000003654	ATG16L2 (ENSPPYG00000003655)	FCHSD2 (ENSPPYG00000003656)	P2RY2 (ENSPPYG00000003658)	P2RY6 (ENSPPYG00000003659)	ARHGEF17 (ENSPPYG00000029870)	RELT (ENSPPYG00000003660)	FAM168A (ENSPPYG00000003661)	PLEKHB1 (ENSPPYG00000003662)	RAB6A (ENSPPYG00000003663)
Gibbon	MODERN SPECIES	5	PGAP2 (ENSNLEG00000032057)	NUP98 (ENSNLEG00000017280)	CHRNA10 (ENSNLEG00000017278)	ART1 (ENSNLEG00000017275)	ART5 (ENSNLEG00000017272)	ENSNLEG00000031989	ENSNLEG00000028363	RNF121 (ENSNLEG00000017264)	IL18BP (ENSNLEG00000017257)	ENSNLEG00000017241	LAMTOR1 (ENSNLEG00000017238)	LRRC51 (ENSNLEG00000030337)	ENSNLEG00000017234	FOLR3 (ENSNLEG00000017224) ##22	FOLR1 (ENSNLEG00000035852) ##22	FOLR2 (ENSNLEG00000027834) ##22	INPPL1 (ENSNLEG00000017207)	ENSNLEG00000034398	ENSNLEG00000033376	ENSNLEG00000017196	PDE2A (ENSNLEG00000017175)	ARAP1 (ENSNLEG00000032891)	STARD10 (ENSNLEG00000017168)	ATG16L2 (ENSNLEG00000017146)	FCHSD2 (ENSNLEG00000017136)	P2RY2 (ENSNLEG00000017134)	P2RY6 (ENSNLEG00000028391)	ARHGEF17 (ENSNLEG00000017127)	RELT (ENSNLEG00000017122)	FAM168A (ENSNLEG00000032977)	ENSNLEG00000035102
Cercopithecidae	ANCESTRAL SPECIES		ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Vervet Monkey	MODERN SPECIES		CHRNA10 (ENSCSAG00000004227)	ART1 (ENSCSAG00000004220)	ART5 (ENSCSAG00000004213)	ENSCSAG00000004211	RNF121 (ENSCSAG00000004206)	IL18BP (ENSCSAG00000004202)	NUMA1 (ENSCSAG00000004200)	LRRC51 (ENSCSAG00000004193)	LAMTOR1 (ENSCSAG00000004190)	TOMT (ENSCSAG00000004187)	ANAPC15 (ENSCSAG00000004184)	ENSCSAG00000004181 ##22	ENSCSAG00000004178 ##22	FOLR1 (ENSCSAG00000004176) ##22	ENSCSAG00000000627	FOLR2 (ENSCSAG00000004161) ##22	INPPL1 (ENSCSAG00000004156)	PHOX2A (ENSCSAG00000004141)	CLPB (ENSCSAG00000004140)	ENSCSAG00000000626	PDE2A (ENSCSAG00000004136)	ARAP1 (ENSCSAG00000004127)	STARD10 (ENSCSAG00000004111)	ATG16L2 (ENSCSAG00000004094)	FCHSD2 (ENSCSAG00000004080)	P2RY2 (ENSCSAG00000000625)	P2RY6 (ENSCSAG00000000624)	ARHGEF17 (ENSCSAG00000004075)	RELT (ENSCSAG00000004070)	FAM168A (ENSCSAG00000004066)	PLEKHB1 (ENSCSAG00000004063)
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Macaca	ANCESTRAL SPECIES	2	ENSGT00390000000214.a.a	ENSGT00940000155158.i	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00390000016789	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Pig-tailed macaque	MODERN SPECIES	423	ENSMNEG00000009473	ENSMNEG00000004843	PGAP2 (ENSMNEG00000004471)	NUP98 (ENSMNEG00000029671)	CHRNA10 (ENSMNEG00000028568)	ART1 (ENSMNEG00000035928)	ART5 (ENSMNEG00000036474)	ENSMNEG00000040075	ENSMNEG00000043225	RNF121 (ENSMNEG00000008640)	IL18BP (ENSMNEG00000036751)	NUMA1 (ENSMNEG00000014073)	TOMT (ENSMNEG00000029982)	LAMTOR1 (ENSMNEG00000032598)	ANAPC15 (ENSMNEG00000038267)	FOLR2 (ENSMNEG00000012370) ##22	ENSMNEG00000038951	FOLR1 (ENSMNEG00000028943) ##22	INPPL1 (ENSMNEG00000031772)	PHOX2A (ENSMNEG00000036777)	CLPB (ENSMNEG00000032568)	PDE2A (ENSMNEG00000016355)	ARAP1 (ENSMNEG00000040367)	STARD10 (ENSMNEG00000036590)	ATG16L2 (ENSMNEG00000036070)	FCHSD2 (ENSMNEG00000034851)	P2RY2 (ENSMNEG00000020248)	P2RY6 (ENSMNEG00000022365)	ARHGEF17 (ENSMNEG00000037963)	RELT (ENSMNEG00000040208)	FAM168A (ENSMNEG00000022700)
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00390000000214.a.a	ENSGT00940000155158.i	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01100000263493.a.a.a.b.a.a.b.b.a.a.a.a.a.a.b.a.b	ENSGT01030000234601.c.b.b	ENSGT00390000004140.b	ENSGT00940000166898.a.a.b.b.a.a.a.a.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00390000016789	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT01100000263493.a.b.a.b.a.a.b.a.b.b.b.a.b.b.a.a.a.a.b.b.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Rhesus	MODERN SPECIES	5	STIM1 (ENSMMUG00000003958)	RHOG (ENSMMUG00000003957)	PGAP2 (ENSMMUG00000003955)	NUP98 (ENSMMUG00000003950)	CHRNA10 (ENSMMUG00000003949)	ART1 (ENSMMUG00000003948)	ENSMMUG00000060447	ART5 (ENSMMUG00000003946)	XNDC1 (ENSMMUG00000007325)	ENSMMUG00000059115	RNF121 (ENSMMUG00000007326)	IL18BP (ENSMMUG00000007340)	NUMA1 (ENSMMUG00000007330)	LRTOMT (ENSMMUG00000021280)	LAMTOR1 (ENSMMUG00000021282)	FOLR2 (ENSMMUG00000010453) ##22	FOLR1 (ENSMMUG00000010455) ##22	INPPL1 (ENSMMUG00000010451)	PHOX2A (ENSMMUG00000060629)	ENSMMUG00000056905	ENSMMUG00000061215	CLPB (ENSMMUG00000005423)	ARAP1 (ENSMMUG00000015054)	STARD10 (ENSMMUG00000039301)	ATG16L2 (ENSMMUG00000001293)	FCHSD2 (ENSMMUG00000001294)	P2RY2 (ENSMMUG00000019186)	P2RY6 (ENSMMUG00000003138)	ARHGEF17 (ENSMMUG00000003139)	RELT (ENSMMUG00000003140)	FAM168A (ENSMMUG00000003142)
Crab-eating macaque	MODERN SPECIES	5	STIM1 (ENSMFAG00000033963)	RHOG (ENSMFAG00000006033)	PGAP2 (ENSMFAG00000036676)	NUP98 (ENSMFAG00000045069)	ENSMFAG00000048588	ART1 (ENSMFAG00000003890)	ENSMFAG00000062116	ART5 (ENSMFAG00000038891)	ENSMFAG00000049163	ENSMFAG00000059552	RNF121 (ENSMFAG00000043086)	ENSMFAG00000007235	NUMA1 (ENSMFAG00000042621)	TOMT (ENSMFAG00000046386)	LAMTOR1 (ENSMFAG00000040752)	FOLR2 (ENSMFAG00000002506) ##22	ENSMFAG00000043902 ##22	FOLR1 (ENSMFAG00000030646) ##22	INPPL1 (ENSMFAG00000037937)	ENSMFAG00000048036	CLPB (ENSMFAG00000039603)	PDE2A (ENSMFAG00000044960)	ARAP1 (ENSMFAG00000039424)	STARD10 (ENSMFAG00000018716)	ENSMFAG00000050335	ENSMFAG00000041534	FCHSD2 (ENSMFAG00000004075)	ENSMFAG00000052451	ENSMFAG00000026637	ENSMFAG00000059191	P2RY6 (ENSMFAG00000028522)
Cercopithecinae_b	ANCESTRAL SPECIES	32	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b.h	ENSGT00390000013075.a.d	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00950000183087.A.a.b.b.g.e.b.b.a.b	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Olive baboon	MODERN SPECIES	3	ENSPANG00000020108	NUP98 (ENSPANG00000004511)	CHRNA10 (ENSPANG00000007812)	ART1 (ENSPANG00000014357)	ART5 (ENSPANG00000006480)	ENSPANG00000035297	ENSPANG00000046603	ENSPANG00000005374	ENSPANG00000017476	ENSPANG00000025408	LAMTOR1 (ENSPANG00000021812)	LRTOMT (ENSPANG00000002496)	ENSPANG00000035397	ENSPANG00000016288 ##22	FOLR1 (ENSPANG00000017795) ##22	FOLR2 (ENSPANG00000050381) ##22	INPPL1 (ENSPANG00000002495)	PHOX2A (ENSPANG00000016550)	CLPB (ENSPANG00000007467)	PDE2A (ENSPANG00000015383)	ARAP1 (ENSPANG00000007955)	STARD10 (ENSPANG00000010680)	ATG16L2 (ENSPANG00000008372)	ENSPANG00000040580	ENSPANG00000039173	FCHSD2 (ENSPANG00000001966)	P2RY2 (ENSPANG00000008844)	P2RY6 (ENSPANG00000017366)	ARHGEF17 (ENSPANG00000000122)	RELT (ENSPANG00000000123)	FAM168A (ENSPANG00000006479)
Cercopithecinae_d	ANCESTRAL SPECIES	27	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b.h	ENSGT00390000013075.a.d	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00950000183087.A.a.b.b.g.e.b.b.a.b	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b
Sooty mangabey	MODERN SPECIES	545	PGAP2 (ENSCATG00000034622)	NUP98 (ENSCATG00000033581)	CHRNA10 (ENSCATG00000038975)	ART1 (ENSCATG00000020846)	ART5 (ENSCATG00000044955)	ENSCATG00000043589	ENSCATG00000043505	RNF121 (ENSCATG00000039465)	IL18BP (ENSCATG00000036233)	NUMA1 (ENSCATG00000044445)	LAMTOR1 (ENSCATG00000045256)	TOMT (ENSCATG00000043251)	ANAPC15 (ENSCATG00000043590)	ENSCATG00000037183	FOLR1 (ENSCATG00000045296) ##22	FOLR2 (ENSCATG00000029421) ##22	INPPL1 (ENSCATG00000038751)	PHOX2A (ENSCATG00000043898)	CLPB (ENSCATG00000044266)	PDE2A (ENSCATG00000042056)	ARAP1 (ENSCATG00000030588)	STARD10 (ENSCATG00000039309)	ATG16L2 (ENSCATG00000042490)	ENSCATG00000014513	FCHSD2 (ENSCATG00000045137)	P2RY2 (ENSCATG00000013549)	P2RY6 (ENSCATG00000010832)	ARHGEF17 (ENSCATG00000031638)	RELT (ENSCATG00000039204)	FAM168A (ENSCATG00000039849)	ENSCATG00000030929
Drill	MODERN SPECIES	1114	NUP98 (ENSMLEG00000043563)	CHRNA10 (ENSMLEG00000019278)	ART1 (ENSMLEG00000030716)	ART5 (ENSMLEG00000008190)	ENSMLEG00000034998	ENSMLEG00000039461	RNF121 (ENSMLEG00000043299)	IL18BP (ENSMLEG00000032241)	NUMA1 (ENSMLEG00000029680)	LAMTOR1 (ENSMLEG00000037079)	TOMT (ENSMLEG00000037107)	ANAPC15 (ENSMLEG00000044094)	ENSMLEG00000037090 ##22	ENSMLEG00000042450 ##22	FOLR1 (ENSMLEG00000030123) ##22	FOLR2 (ENSMLEG00000017682) ##22	INPPL1 (ENSMLEG00000007523)	PHOX2A (ENSMLEG00000028217)	ENSMLEG00000028161	ENSMLEG00000030118	CLPB (ENSMLEG00000015735)	PDE2A (ENSMLEG00000042765)	ARAP1 (ENSMLEG00000028377)	STARD10 (ENSMLEG00000018192)	ATG16L2 (ENSMLEG00000035462)	FCHSD2 (ENSMLEG00000038604)
Rhinopithecus	ANCESTRAL SPECIES	21	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000018423.a
Golden snub-nosed monkey	MODERN SPECIES	1304	NUP98 (ENSRROG00000031812)	CHRNA10 (ENSRROG00000043364)	ART1 (ENSRROG00000044951)	ART5 (ENSRROG00000039668)	ENSRROG00000043049	ENSRROG00000032358	RNF121 (ENSRROG00000002251)	IL18BP (ENSRROG00000036271)	NUMA1 (ENSRROG00000031539)	LAMTOR1 (ENSRROG00000043908)	TOMT (ENSRROG00000039719)	ENSRROG00000032455	ENSRROG00000014196	ENSRROG00000003896 ##22	FOLR1 (ENSRROG00000042045) ##22	FOLR2 (ENSRROG00000044789) ##22	INPPL1 (ENSRROG00000030610)	PHOX2A (ENSRROG00000026638)	ENSRROG00000036788	CLPB (ENSRROG00000041613)	PDE2A (ENSRROG00000042016)	ARAP1 (ENSRROG00000029375)	STARD10 (ENSRROG00000024050)	ATG16L2 (ENSRROG00000024129)	FCHSD2 (ENSRROG00000041973)	P2RY2 (ENSRROG00000025105)	P2RY6 (ENSRROG00000002754)	ARHGEF17 (ENSRROG00000041198)	RELT (ENSRROG00000042366)	ENSRROG00000034790	FAM168A (ENSRROG00000011809)
Black snub-nosed monkey	MODERN SPECIES	1182	NUP98 (ENSRBIG00000042244)	CHRNA10 (ENSRBIG00000009540)	ART1 (ENSRBIG00000032899)	ART5 (ENSRBIG00000031267)	ENSRBIG00000044109	ENSRBIG00000000062	RNF121 (ENSRBIG00000038083)	IL18BP (ENSRBIG00000037256)	NUMA1 (ENSRBIG00000034317)	LAMTOR1 (ENSRBIG00000028888)	ENSRBIG00000033808	TOMT (ENSRBIG00000037486)	ENSRBIG00000040696	ENSRBIG00000039297 ##22	FOLR1 (ENSRBIG00000040144) ##22	FOLR2 (ENSRBIG00000029344) ##22	INPPL1 (ENSRBIG00000040337)	PHOX2A (ENSRBIG00000036312)	ENSRBIG00000038945	CLPB (ENSRBIG00000027633)	PDE2A (ENSRBIG00000010840)	ARAP1 (ENSRBIG00000016228)	STARD10 (ENSRBIG00000031300)	ATG16L2 (ENSRBIG00000033050)	FCHSD2 (ENSRBIG00000034018)	P2RY6 (ENSRBIG00000001344)	ARHGEF17 (ENSRBIG00000028737)	RELT (ENSRBIG00000019893)	FAM168A (ENSRBIG00000031689)	ENSRBIG00000044591	PLEKHB1 (ENSRBIG00000012607)
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00510000047925	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000154879.ib	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Cebidae	ANCESTRAL SPECIES		ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000154879.ib	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Cebidae_a	ANCESTRAL SPECIES	10	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000154879.ib	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Capuchin	MODERN SPECIES	79	CHRNA10 (ENSCCAG00000024887)	ART1 (ENSCCAG00000037398)	ART5 (ENSCCAG00000036098)	ENSCCAG00000025594	RNF121 (ENSCCAG00000027188)	IL18BP (ENSCCAG00000029744)	NUMA1 (ENSCCAG00000036774)	LRRC51 (ENSCCAG00000027389)	LAMTOR1 (ENSCCAG00000031446)	TOMT (ENSCCAG00000034068)	ENSCCAG00000000895	ENSCCAG00000026504	ENSCCAG00000033272 ##22	ENSCCAG00000026662	ENSCCAG00000032275 ##22	FOLR2 (ENSCCAG00000032155) ##22	INPPL1 (ENSCCAG00000024212)	PHOX2A (ENSCCAG00000028435)	CLPB (ENSCCAG00000032490)	PDE2A (ENSCCAG00000020637)	ARAP1 (ENSCCAG00000034708)	STARD10 (ENSCCAG00000027567)	ATG16L2 (ENSCCAG00000036440)	FCHSD2 (ENSCCAG00000024519)	ENSCCAG00000034490	P2RY2 (ENSCCAG00000020034)	P2RY6 (ENSCCAG00000019886)	ARHGEF17 (ENSCCAG00000029348)	RELT (ENSCCAG00000034344)	FAM168A (ENSCCAG00000021168)	PLEKHB1 (ENSCCAG00000020844)
Bolivian squirrel monkey	MODERN SPECIES	50	PGAP2 (ENSSBOG00000032817)	NUP98 (ENSSBOG00000030446)	ENSSBOG00000017856	CHRNA10 (ENSSBOG00000013019)	ART1 (ENSSBOG00000035768)	ART5 (ENSSBOG00000019182)	ENSSBOG00000028191	ENSSBOG00000011177	RNF121 (ENSSBOG00000029753)	ENSSBOG00000027382	IL18BP (ENSSBOG00000033231)	NUMA1 (ENSSBOG00000032575)	ENSSBOG00000032090	TOMT (ENSSBOG00000033709)	ENSSBOG00000035680	FOLR2 (ENSSBOG00000030720) ##22	ENSSBOG00000027615 ##22	FOLR1 (ENSSBOG00000032792) ##22	INPPL1 (ENSSBOG00000028042)	PHOX2A (ENSSBOG00000019317)	CLPB (ENSSBOG00000031007)	PDE2A (ENSSBOG00000035008)	ARAP1 (ENSSBOG00000031716)	STARD10 (ENSSBOG00000022143)	ATG16L2 (ENSSBOG00000027588)	FCHSD2 (ENSSBOG00000018307)	ENSSBOG00000023173	ENSSBOG00000027673	ENSSBOG00000027043	P2RY2 (ENSSBOG00000010684)	ARHGEF17 (ENSSBOG00000024564)
Marmoset	MODERN SPECIES	2	RRM1 (ENSCJAG00000015495)	RHOG (ENSCJAG00000048517)	ENSCJAG00000015470	ENSCJAG00000015332	CHRNA10 (ENSCJAG00000015465)	ART1 (ENSCJAG00000015457)	ENSCJAG00000032556	ENSCJAG00000071881	IL18BP (ENSCJAG00000015324)	NUMA1 (ENSCJAG00000015253)	LRTOMT (ENSCJAG00000046450)	ANAPC15 (ENSCJAG00000069144)	ENSCJAG00000074280 ##22	ENSCJAG00000015239 ##22	FOLR1 (ENSCJAG00000015224) ##22	FOLR2 (ENSCJAG00000015212) ##22	INPPL1 (ENSCJAG00000015191)	PHOX2A (ENSCJAG00000015188)	CLPB (ENSCJAG00000015121)	ENSCJAG00000085949	PDE2A (ENSCJAG00000015101)	ARAP1 (ENSCJAG00000015038)	ENSCJAG00000074795	STARD10 (ENSCJAG00000043524)	ATG16L2 (ENSCJAG00000014994)	FCHSD2 (ENSCJAG00000014990)	ENSCJAG00000084151	P2RY6 (ENSCJAG00000022091)	ARHGEF17 (ENSCJAG00000015946)	RELT (ENSCJAG00000015934)	FAM168A (ENSCJAG00000015915)
Mas night monkey	MODERN SPECIES	830	NUP98 (ENSANAG00000020861)	ENSANAG00000030802	CHRNA10 (ENSANAG00000038522)	ART1 (ENSANAG00000025055)	ART5 (ENSANAG00000025964)	TRPC2 (ENSANAG00000028976)	ENSANAG00000022344	RNF121 (ENSANAG00000037407)	IL18BP (ENSANAG00000020709)	NUMA1 (ENSANAG00000038526)	LAMTOR1 (ENSANAG00000037872)	TOMT (ENSANAG00000032602)	ENSANAG00000028571	FOLR3 (ENSANAG00000023349) ##22	FOLR1 (ENSANAG00000036278) ##22	FOLR2 (ENSANAG00000026670) ##22	INPPL1 (ENSANAG00000027766)	PHOX2A (ENSANAG00000023728)	CLPB (ENSANAG00000032809)	PDE2A (ENSANAG00000032518)	ARAP1 (ENSANAG00000038203)	STARD10 (ENSANAG00000021823)	ATG16L2 (ENSANAG00000001465)	ENSANAG00000038483	FCHSD2 (ENSANAG00000027876)	P2RY2 (ENSANAG00000004407)	P2RY6 (ENSANAG00000012418)	ARHGEF17 (ENSANAG00000033936)	RELT (ENSANAG00000019742)	FAM168A (ENSANAG00000027985)	ENSANAG00000024968
Tarsier	MODERN SPECIES	1848																FOLR2 (ENSTSYG00000029773) ##22	INPPL1 (ENSTSYG00000004075)	PHOX2A (ENSTSYG00000034768)
Strepsirrhini	DUPLICATION
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.o ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b	ENSGT00940000154769
Lemuriformes	ANCESTRAL SPECIES	13	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.o ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b	ENSGT00940000154769
Lemuriformes_a	ANCESTRAL SPECIES	50	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.o ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b	ENSGT00940000154769
Greater bamboo lemur	MODERN SPECIES	254	PGAP2 (ENSPSMG00000013810)	ENSPSMG00000013767	NUP98 (ENSPSMG00000013580)	CHRNA10 (ENSPSMG00000013408)	ART1 (ENSPSMG00000013396)	ART5 (ENSPSMG00000013386)	ENSPSMG00000013373	ENSPSMG00000013357	RNF121 (ENSPSMG00000013330)	IL18BP (ENSPSMG00000013284)	NUMA1 (ENSPSMG00000012829)	LAMTOR1 (ENSPSMG00000012519)	TOMT (ENSPSMG00000012468)	ANAPC15 (ENSPSMG00000012383)	FOLR1 (ENSPSMG00000012351) ##22	FOLR2 (ENSPSMG00000012333) ##22	INPPL1 (ENSPSMG00000012299)	PHOX2A (ENSPSMG00000012271)	CLPB (ENSPSMG00000012111)	ENSPSMG00000011792	PDE2A (ENSPSMG00000011524)	ARAP1 (ENSPSMG00000010436)	STARD10 (ENSPSMG00000009819)	ATG16L2 (ENSPSMG00000009784)	FCHSD2 (ENSPSMG00000009609)	P2RY2 (ENSPSMG00000009468)	P2RY6 (ENSPSMG00000009466)	ARHGEF17 (ENSPSMG00000009449)	RELT (ENSPSMG00000009387)	ENSPSMG00000009349	FAM168A (ENSPSMG00000009333)
Coquerels sifaka	MODERN SPECIES	338	PGAP2 (ENSPCOG00000023518)	NUP98 (ENSPCOG00000020820)	CHRNA10 (ENSPCOG00000000604)	ART1 (ENSPCOG00000023847)	ART5 (ENSPCOG00000019894)	ENSPCOG00000008155	ENSPCOG00000018031	RNF121 (ENSPCOG00000028445)	IL18BP (ENSPCOG00000022571)	NUMA1 (ENSPCOG00000028849)	LAMTOR1 (ENSPCOG00000019358)	TOMT (ENSPCOG00000021317)	ANAPC15 (ENSPCOG00000022372)	FOLR3 (ENSPCOG00000015335) ##22	FOLR1 (ENSPCOG00000024246) ##22	FOLR2 (ENSPCOG00000026871) ##22	INPPL1 (ENSPCOG00000017270)	PHOX2A (ENSPCOG00000013897)	CLPB (ENSPCOG00000025816)	PDE2A (ENSPCOG00000025497)	ARAP1 (ENSPCOG00000023351)	STARD10 (ENSPCOG00000019255)	ATG16L2 (ENSPCOG00000024003)	FCHSD2 (ENSPCOG00000011232)	ARHGEF17 (ENSPCOG00000025949)	RELT (ENSPCOG00000014211)	FAM168A (ENSPCOG00000020680)	PLEKHB1 (ENSPCOG00000019823)	RAB6A (ENSPCOG00000021991)	ENSPCOG00000025047	PAAF1 (ENSPCOG00000017138)
Mouse lemur	MODERN SPECIES	27	PGAP2 (ENSMICG00000003239)	NUP98 (ENSMICG00000003216)	CHRNA10 (ENSMICG00000048048)	ART1 (ENSMICG00000028693)	ART5 (ENSMICG00000014815)	TRPC2 (ENSMICG00000030772)	ENSMICG00000014788	RNF121 (ENSMICG00000014792)	IL18BP (ENSMICG00000014827)	NUMA1 (ENSMICG00000014831)	TOMT (ENSMICG00000010445)	LAMTOR1 (ENSMICG00000010450)	ENSMICG00000029423	ENSMICG00000013939 ##22	FOLR1 (ENSMICG00000030044) ##22	FOLR2 (ENSMICG00000037402) ##22	INPPL1 (ENSMICG00000011696)	PHOX2A (ENSMICG00000004256)	CLPB (ENSMICG00000011735)	PDE2A (ENSMICG00000012366)	ARAP1 (ENSMICG00000012392)	STARD10 (ENSMICG00000029572)	ATG16L2 (ENSMICG00000012424)	FCHSD2 (ENSMICG00000012437)	ENSMICG00000029704	ARHGEF17 (ENSMICG00000016715)	RELT (ENSMICG00000016731)	FAM168A (ENSMICG00000043205)	ENSMICG00000031782	PLEKHB1 (ENSMICG00000003147)	RAB6A (ENSMICG00000031565)
Bushbaby	MODERN SPECIES	116	STIM1 (ENSOGAG00000011877)	RHOG (ENSOGAG00000030422)	PGAP2 (ENSOGAG00000013298)	NUP98 (ENSOGAG00000034549)	CHRNA10 (ENSOGAG00000007040)	ART1 (ENSOGAG00000032956)	ART5 (ENSOGAG00000014785)	ENSOGAG00000027009	RNF121 (ENSOGAG00000000958)	NUMA1 (ENSOGAG00000000960)	LRRC51 (ENSOGAG00000001364)	LAMTOR1 (ENSOGAG00000031156)	TOMT (ENSOGAG00000025408)	ANAPC15 (ENSOGAG00000027496)	FOLR1 (ENSOGAG00000000641) ##22	FOLR2 (ENSOGAG00000031929) ##22	INPPL1 (ENSOGAG00000012996)	PHOX2A (ENSOGAG00000026307)	CLPB (ENSOGAG00000015338)	PDE2A (ENSOGAG00000006218)	ARAP1 (ENSOGAG00000011984)	STARD10 (ENSOGAG00000029093)	ATG16L2 (ENSOGAG00000012494)	FCHSD2 (ENSOGAG00000011995)	P2RY2 (ENSOGAG00000000742)	P2RY6 (ENSOGAG00000000743)	ARHGEF17 (ENSOGAG00000000744)	RELT (ENSOGAG00000000748)	FAM168A (ENSOGAG00000000749)	ENSOGAG00000033848	PLEKHB1 (ENSOGAG00000007287)
Strepsirrhini	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.a.b.p ##22
Lemuriformes	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.a.b.p ##22
Mouse lemur	MODERN SPECIES	27	STIM1 (ENSMICG00000015437)	RHOG (ENSMICG00000044004)	PGAP2 (ENSMICG00000003239)	NUP98 (ENSMICG00000003216)	CHRNA10 (ENSMICG00000048048)	ART1 (ENSMICG00000028693)	ART5 (ENSMICG00000014815)	TRPC2 (ENSMICG00000030772)	ENSMICG00000014788	RNF121 (ENSMICG00000014792)	IL18BP (ENSMICG00000014827)	NUMA1 (ENSMICG00000014831)	TOMT (ENSMICG00000010445)	LAMTOR1 (ENSMICG00000010450)	ENSMICG00000029423	ENSMICG00000013939 ##22	FOLR1 (ENSMICG00000030044) ##22	FOLR2 (ENSMICG00000037402) ##22	INPPL1 (ENSMICG00000011696)	PHOX2A (ENSMICG00000004256)	CLPB (ENSMICG00000011735)	PDE2A (ENSMICG00000012366)	ARAP1 (ENSMICG00000012392)	STARD10 (ENSMICG00000029572)	ATG16L2 (ENSMICG00000012424)	FCHSD2 (ENSMICG00000012437)	ENSMICG00000029704	ARHGEF17 (ENSMICG00000016715)	RELT (ENSMICG00000016731)	FAM168A (ENSMICG00000043205)	ENSMICG00000031782
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000167530	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Glires	ANCESTRAL SPECIES	1	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Rodentia	ANCESTRAL SPECIES	1	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789.t.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Marmotini	ANCESTRAL SPECIES	28	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789.t.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Marmotini_b	ANCESTRAL SPECIES	13	ENSGT00550000074799	ENSGT00550000074873.l.a.b	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789.t.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Squirrel	MODERN SPECIES	98	NUP98 (ENSSTOG00000027525)	ENSSTOG00000030092	CHRNA10 (ENSSTOG00000023110)	ART1 (ENSSTOG00000021482)	ART5 (ENSSTOG00000028010)	ENSSTOG00000026237	RNF121 (ENSSTOG00000010800)	IL18BP (ENSSTOG00000033761)	NUMA1 (ENSSTOG00000010821)	ENSSTOG00000030734	ENSSTOG00000023118	LRRC51 (ENSSTOG00000010863)	TOMT (ENSSTOG00000027749)	ANAPC15 (ENSSTOG00000023840)	FOLR1 (ENSSTOG00000010871) ##22	FOLR2 (ENSSTOG00000004760) ##22	INPPL1 (ENSSTOG00000010874)	PHOX2A (ENSSTOG00000021537)	CLPB (ENSSTOG00000004769)	ENSSTOG00000019965	PDE2A (ENSSTOG00000004792)	ARAP1 (ENSSTOG00000014711)	STARD10 (ENSSTOG00000020779)	ATG16L2 (ENSSTOG00000003790)	FCHSD2 (ENSSTOG00000003831)	P2RY2 (ENSSTOG00000029054)	P2RY6 (ENSSTOG00000024044)	ARHGEF17 (ENSSTOG00000014476)	RELT (ENSSTOG00000014491)	FAM168A (ENSSTOG00000014507)	PLEKHB1 (ENSSTOG00000022422)
Arctic ground squirrel	MODERN SPECIES	238	NUP98 (ENSUPAG00010019310)	ENSUPAG00010019361	CHRNA10 (ENSUPAG00010019373)	ART1 (ENSUPAG00010019379)	ART5 (ENSUPAG00010019384)	ENSUPAG00010019427	ENSUPAG00010019504	RNF121 (ENSUPAG00010019519)	IL18BP (ENSUPAG00010019545)	NUMA1 (ENSUPAG00010019551)	LAMTOR1 (ENSUPAG00010019589)	ENSUPAG00010019609	TOMT (ENSUPAG00010019634)	ANAPC15 (ENSUPAG00010019644)	FOLR1 (ENSUPAG00010019692) ##22	FOLR2 (ENSUPAG00010019707) ##22	INPPL1 (ENSUPAG00010019719)	PHOX2A (ENSUPAG00010019756)	ENSUPAG00010019762	CLPB (ENSUPAG00010019765)	ENSUPAG00010019794	PDE2A (ENSUPAG00010019809)	ARAP1 (ENSUPAG00010019919)	STARD10 (ENSUPAG00010020080)	ATG16L2 (ENSUPAG00010020103)	ENSUPAG00010020122
Alpin marmot	MODERN SPECIES	3	PGAP2 (ENSMMMG00000012503)	ENSMMMG00000012497	NUP98 (ENSMMMG00000012428)	CHRNA10 (ENSMMMG00000012422)	ART1 (ENSMMMG00000012409)	ART5 (ENSMMMG00000012335)	ENSMMMG00000012273	RNF121 (ENSMMMG00000012228)	IL18BP (ENSMMMG00000012171)	NUMA1 (ENSMMMG00000012073)	LRRC51 (ENSMMMG00000012002)	ENSMMMG00000011993	TOMT (ENSMMMG00000011977)	ANAPC15 (ENSMMMG00000011899)	FOLR1 (ENSMMMG00000011885) ##22	FOLR2 (ENSMMMG00000011868) ##22	INPPL1 (ENSMMMG00000011850)	ENSMMMG00000011846	CLPB (ENSMMMG00000011769)	ENSMMMG00000011761	ENSMMMG00000011745	PDE2A (ENSMMMG00000011641)	ARAP1 (ENSMMMG00000011395)	STARD10 (ENSMMMG00000011387)	ATG16L2 (ENSMMMG00000011309)	FCHSD2 (ENSMMMG00000011218)	P2RY2 (ENSMMMG00000011203)	P2RY6 (ENSMMMG00000011197)	ARHGEF17 (ENSMMMG00000011108)	RELT (ENSMMMG00000011086)	FAM168A (ENSMMMG00000010911)
Eurasian red squirrel	MODERN SPECIES	2	STIM1 (ENSSVLG00005012021)	RHOG (ENSSVLG00005012192)	PGAP2 (ENSSVLG00005012266)	NUP98 (ENSSVLG00005012518)	ART1 (ENSSVLG00005012997)	ART5 (ENSSVLG00005013095)	ENSSVLG00005013515	RNF121 (ENSSVLG00005013754)	IL18BP (ENSSVLG00005013917)	NUMA1 (ENSSVLG00005014050)	LRRC51 (ENSSVLG00005014225)	LAMTOR1 (ENSSVLG00005014350)	TOMT (ENSSVLG00005014436)	ANAPC15 (ENSSVLG00005014488)	FOLR1 (ENSSVLG00005014547) ##22	FOLR2 (ENSSVLG00005014598) ##22	INPPL1 (ENSSVLG00005014717)	PHOX2A (ENSSVLG00005014822)	CLPB (ENSSVLG00005014931)	ENSSVLG00005015120	ENSSVLG00005015181	PDE2A (ENSSVLG00005015411)	ARAP1 (ENSSVLG00005016156)	STARD10 (ENSSVLG00005016723)	ENSSVLG00005016893	ENSSVLG00005016976	P2RY2 (ENSSVLG00005017053)	P2RY6 (ENSSVLG00005017079)	ARHGEF17 (ENSSVLG00005017138)	RELT (ENSSVLG00005017446)	FAM168A (ENSSVLG00005017595)
Rodentia_B	ANCESTRAL SPECIES	33	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Kangaroo rat	MODERN SPECIES	341	Rhog (ENSDORG00000026853)	Pgap2 (ENSDORG00000015417)	Nup98 (ENSDORG00000015576)	Chrna10 (ENSDORG00000001387)	Art1 (ENSDORG00000001385)	Art5 (ENSDORG00000001382)	ENSDORG00000025634	Rnf121 (ENSDORG00000011927)	Il18bp (ENSDORG00000028634)	Numa1 (ENSDORG00000011931)	Lrrc51 (ENSDORG00000004447)	Lamtor1 (ENSDORG00000025485)	Tomt (ENSDORG00000028464)	Anapc15-ps (ENSDORG00000028333)	Folr1 (ENSDORG00000012556) ##22	Folr2 (ENSDORG00000030135) ##22	Inppl1 (ENSDORG00000011283)	Phox2a (ENSDORG00000011281)	ENSDORG00000000660	Pde2a (ENSDORG00000010009)	Stard10 (ENSDORG00000010017)	Atg16l2 (ENSDORG00000011918)	Fchsd2 (ENSDORG00000011922)	P2ry2 (ENSDORG00000014962)	ENSDORG00000028773	ENSDORG00000024940	P2ry6 (ENSDORG00000024896)	Arhgef17 (ENSDORG00000004680)	Relt (ENSDORG00000011226)	Fam168a (ENSDORG00000024331)	Plekhb1 (ENSDORG00000014122)
Myomorpha	ANCESTRAL SPECIES	13	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Muroidea	ANCESTRAL SPECIES	12	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Muroidea_A	ANCESTRAL SPECIES		ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d.g	ENSGT01030000234601.d.h	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Cricetidae_B	ANCESTRAL SPECIES	26	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT01030000234601.d.g	ENSGT01030000234601.d.h	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Northern American deer mouse	MODERN SPECIES		Pgap2 (ENSPEMG00000015466)	Nup98 (ENSPEMG00000016300)	Chrna10 (ENSPEMG00000017386)	Art1 (ENSPEMG00000016101)	Art5 (ENSPEMG00000017665)	ENSPEMG00000010719	ENSPEMG00000025957	Rnf121 (ENSPEMG00000012343)	Il18bp (ENSPEMG00000014508)	Numa1 (ENSPEMG00000014078)	ENSPEMG00000008657	Lamtor1 (ENSPEMG00000016570)	Tomt (ENSPEMG00000027342)	Anapc15-ps (ENSPEMG00000019092)	Folr1 (ENSPEMG00000014185) ##22	Folr2 (ENSPEMG00000025691) ##22	Inppl1 (ENSPEMG00000001871)	Phox2a (ENSPEMG00000030123)	Clpb (ENSPEMG00000008808)	ENSPEMG00000026828	ENSPEMG00000026615	ENSPEMG00000026968	Dlg2 (ENSPEMG00000000578)	Ccdc90b (ENSPEMG00000024143)	ENSPEMG00000025655	Ankrd42 (ENSPEMG00000007018)	ENSPEMG00000030761	ENSPEMG00000003266	ENSPEMG00000030624	Rab30 (ENSPEMG00000023854)	Ddias (ENSPEMG00000023174)
Prairie vole	MODERN SPECIES	124	Pgap2 (ENSMOCG00000006118)	Nup98 (ENSMOCG00000008330)	Chrna10 (ENSMOCG00000005181)	Art1 (ENSMOCG00000021442)	Art5 (ENSMOCG00000013346)	ENSMOCG00000004641	Rnf121 (ENSMOCG00000013442)	Il18bp (ENSMOCG00000013050)	Numa1 (ENSMOCG00000018430)	Lrrc51 (ENSMOCG00000010256)	Lamtor1 (ENSMOCG00000018156)	Tomt (ENSMOCG00000006456)	Anapc15-ps (ENSMOCG00000002457)	ENSMOCG00000013848	ENSMOCG00000010849	Folr2 (ENSMOCG00000019883) ##22	Inppl1 (ENSMOCG00000008314)	Phox2a (ENSMOCG00000001587)	ENSMOCG00000020605	ENSMOCG00000014105	Arap1 (ENSMOCG00000018102)	ENSMOCG00000003369	Atg16l2 (ENSMOCG00000020412)	Fchsd2 (ENSMOCG00000014516)	P2ry2 (ENSMOCG00000018461)	P2ry6 (ENSMOCG00000017677)	ENSMOCG00000000106	Relt (ENSMOCG00000001751)	Fam168a (ENSMOCG00000012224)	ENSMOCG00000004502	Plekhb1 (ENSMOCG00000012335)
Cricetinae	ANCESTRAL SPECIES	15	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT01030000234601.d.g	ENSGT01030000234601.d.h	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Golden Hamster	MODERN SPECIES	660	Rhog (ENSMAUG00000000774)	Pgap2 (ENSMAUG00000014694)	Nup98 (ENSMAUG00000007796)	Chrna10 (ENSMAUG00000005411)	Art1 (ENSMAUG00000021510)	Art5 (ENSMAUG00000018734)	ENSMAUG00000007241	Rnf121 (ENSMAUG00000001102)	Il18bp (ENSMAUG00000018941)	Numa1 (ENSMAUG00000009039)	Lrrc51 (ENSMAUG00000019182)	Lamtor1 (ENSMAUG00000007664)	Tomt (ENSMAUG00000007579)	Anapc15-ps (ENSMAUG00000019284)	ENSMAUG00000001686	Folr2 (ENSMAUG00000008465) ##22	Inppl1 (ENSMAUG00000001936)	Phox2a (ENSMAUG00000015452)	ENSMAUG00000019071	ENSMAUG00000020199	ENSMAUG00000015433	Arap1 (ENSMAUG00000013533)	Stard10 (ENSMAUG00000019503)	Atg16l2 (ENSMAUG00000021267)	Fchsd2 (ENSMAUG00000021476)	P2ry2 (ENSMAUG00000014993)	P2ry6 (ENSMAUG00000018708)	ENSMAUG00000013880	Relt (ENSMAUG00000014770)	Fam168a (ENSMAUG00000022112)	Plekhb1 (ENSMAUG00000019995)
Chinese hamster chok1gshd	MODERN SPECIES	101	Rhog (ENSCGRG00001008934)	Pgap2 (ENSCGRG00001021425)	Nup98 (ENSCGRG00001020636)	Chrna10 (ENSCGRG00001010661)	Art1 (ENSCGRG00001002060)	Art5 (ENSCGRG00001020472)	ENSCGRG00001016215	Rnf121 (ENSCGRG00001014503)	Il18bp (ENSCGRG00001013762)	Numa1 (ENSCGRG00001022188)	Lrrc51 (ENSCGRG00001002333)	Lamtor1 (ENSCGRG00001022318)	Tomt (ENSCGRG00001015404)	Anapc15-ps (ENSCGRG00001005734)	Folr1 (ENSCGRG00001016933) ##22	Folr2 (ENSCGRG00001007737) ##22	Inppl1 (ENSCGRG00001008145)	Phox2a (ENSCGRG00001000999)	Clpb (ENSCGRG00001003280)	ENSCGRG00001019437	ENSCGRG00001019112	ENSCGRG00001016840	Pde2a (ENSCGRG00001018176)	Arap1 (ENSCGRG00001017180)	Stard10 (ENSCGRG00001017553)	Atg16l2 (ENSCGRG00001020091)	Fchsd2 (ENSCGRG00001000379)	P2ry2 (ENSCGRG00001001173)	P2ry6 (ENSCGRG00001012749)	Arhgef17 (ENSCGRG00001012651)	Relt (ENSCGRG00001022996)
Murinae	ANCESTRAL SPECIES		ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Mus	ANCESTRAL SPECIES		ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Mus_A	ANCESTRAL SPECIES	1	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d.e	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350.a	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Mus_B	ANCESTRAL SPECIES		ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789.r.a	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d.e	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350.a	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Mouse	MODERN SPECIES	16	Nup98 (ENSMUSG00000063550)	Chrna10 (ENSMUSG00000066279)	Art1 (ENSMUSG00000030996)	Art5 (ENSMUSG00000070424)	Trpc2 (ENSMUSG00000100254)	Xntrpc (ENSMUSG00000070425)	Xndc1 (ENSMUSG00000099481)	Rnf121 (ENSMUSG00000070426)	Il18bp (ENSMUSG00000070427)	Numa1 (ENSMUSG00000066306)	Lrrc51 (ENSMUSG00000064307)	Lamtor1 (ENSMUSG00000030842)	Tomt (ENSMUSG00000078630)	Anapc15 (ENSMUSG00000030649)	Folr1 (ENSMUSG00000001827) ##22	Folr2 (ENSMUSG00000032725) ##22	Inppl1 (ENSMUSG00000032737)	Phox2a (ENSMUSG00000007946)	Clpb (ENSMUSG00000001829)	Art2b (ENSMUSG00000030651)	Art2a (ENSMUSG00000092517)	Pde2a (ENSMUSG00000110195)	Gm45837 (ENSMUSG00000030653)	Arap1 (ENSMUSG00000032812)	Stard10 (ENSMUSG00000030688)	Atg16l2 (ENSMUSG00000047767)	Fchsd2 (ENSMUSG00000030691)	P2ry2 (ENSMUSG00000032860)	P2ry6 (ENSMUSG00000048779)	Arhgef17 (ENSMUSG00000032875)	Relt (ENSMUSG00000008318)
Mus_C	ANCESTRAL SPECIES	13	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789.r.a	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d.e	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350.a	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Steppe mouse	MODERN SPECIES	3349	Nup98 (ENSMSIG00000002896)	Chrna10 (ENSMSIG00000002835)	Art1 (ENSMSIG00000002789)	Art5 (ENSMSIG00000002670)	ENSMSIG00000002300	ENSMSIG00000002248	Rnf121 (ENSMSIG00000002104)	Il18bp (ENSMSIG00000028554)	Numa1 (ENSMSIG00000028506)	Lrrc51 (ENSMSIG00000028501)	Lamtor1 (ENSMSIG00000028492)	Tomt (ENSMSIG00000028487)	Anapc15 (ENSMSIG00000028474)	Folr1 (ENSMSIG00000028445) ##22	ENSMSIG00000028441	Folr2 (ENSMSIG00000028432) ##22	Inppl1 (ENSMSIG00000028415)	Phox2a (ENSMSIG00000028410)	Clpb (ENSMSIG00000028373)	Art2b (ENSMSIG00000028361)	ENSMSIG00000028355	Pde2a (ENSMSIG00000028275)	Arap1 (ENSMSIG00000028221)	Stard10 (ENSMSIG00000028188)	Atg16l2 (ENSMSIG00000028165)	Fchsd2 (ENSMSIG00000028158)	P2ry2 (ENSMSIG00000028156)	P2ry6 (ENSMSIG00000028155)	Arhgef17 (ENSMSIG00000028136)	Relt (ENSMSIG00000028128)	Fam168a (ENSMSIG00000028072)
spretus	MODERN SPECIES	16	MGP_SPRETEiJ_G0031193	Chrna10 (MGP_SPRETEiJ_G0031192)	Art1 (MGP_SPRETEiJ_G0031191)	Art5 (MGP_SPRETEiJ_G0031190)	MGP_SPRETEiJ_G0031189	MGP_SPRETEiJ_G0031188	MGP_SPRETEiJ_G0031187	Rnf121 (MGP_SPRETEiJ_G0031186)	Il18bp (MGP_SPRETEiJ_G0031185)	Numa1 (MGP_SPRETEiJ_G0031184)	Lrrc51 (MGP_SPRETEiJ_G0031183)	Lamtor1 (MGP_SPRETEiJ_G0031182)	Tomt (MGP_SPRETEiJ_G0031181)	Anapc15 (MGP_SPRETEiJ_G0031180)	Folr1 (MGP_SPRETEiJ_G0031179) ##22	Folr2 (MGP_SPRETEiJ_G0031178) ##22	Inppl1 (MGP_SPRETEiJ_G0031177)	Phox2a (MGP_SPRETEiJ_G0031176)	Clpb (MGP_SPRETEiJ_G0031175)	MGP_SPRETEiJ_G0031174	MGP_SPRETEiJ_G0031173	Arap1 (MGP_SPRETEiJ_G0031172)	Stard10 (MGP_SPRETEiJ_G0031171)	Atg16l2 (MGP_SPRETEiJ_G0031170)	Fchsd2 (MGP_SPRETEiJ_G0031169)	P2ry2 (MGP_SPRETEiJ_G0031168)	P2ry6 (MGP_SPRETEiJ_G0031167)	Arhgef17 (MGP_SPRETEiJ_G0031166)	Relt (MGP_SPRETEiJ_G0031165)	Fam168a (MGP_SPRETEiJ_G0031164)	Plekhb1 (MGP_SPRETEiJ_G0031163)
Ryukyu mouse	MODERN SPECIES	16	MGP_CAROLIEiJ_G0030082	Chrna10 (MGP_CAROLIEiJ_G0030081)	Art1 (MGP_CAROLIEiJ_G0030080)	MGP_CAROLIEiJ_G0030079	MGP_CAROLIEiJ_G0030078	MGP_CAROLIEiJ_G0030077	MGP_CAROLIEiJ_G0030076	Rnf121 (MGP_CAROLIEiJ_G0030075)	Il18bp (MGP_CAROLIEiJ_G0030074)	Numa1 (MGP_CAROLIEiJ_G0030073)	Lrrc51 (MGP_CAROLIEiJ_G0030072)	Lamtor1 (MGP_CAROLIEiJ_G0030071)	Tomt (MGP_CAROLIEiJ_G0030070)	MGP_CAROLIEiJ_G0030069	Folr1 (MGP_CAROLIEiJ_G0030068) ##22	Folr2 (MGP_CAROLIEiJ_G0030067) ##22	Inppl1 (MGP_CAROLIEiJ_G0030066)	Phox2a (MGP_CAROLIEiJ_G0030065)	Clpb (MGP_CAROLIEiJ_G0030064)	Art2b (MGP_CAROLIEiJ_G0030063)	Pde2a (MGP_CAROLIEiJ_G0030062)	Arap1 (MGP_CAROLIEiJ_G0030061)	Stard10 (MGP_CAROLIEiJ_G0030060)	Atg16l2 (MGP_CAROLIEiJ_G0030059)	Fchsd2 (MGP_CAROLIEiJ_G0030058)	P2ry2 (MGP_CAROLIEiJ_G0030057)	P2ry6 (MGP_CAROLIEiJ_G0030056)	Arhgef17 (MGP_CAROLIEiJ_G0030055)	Relt (MGP_CAROLIEiJ_G0030054)	Fam168a (MGP_CAROLIEiJ_G0030053)	Plekhb1 (MGP_CAROLIEiJ_G0030052)
Shrew mouse	MODERN SPECIES		MGP_PahariEiJ_G0013303	Chrna10 (MGP_PahariEiJ_G0013302)	Art1 (MGP_PahariEiJ_G0013301)	Art5 (MGP_PahariEiJ_G0013300)	MGP_PahariEiJ_G0013299	MGP_PahariEiJ_G0013298	MGP_PahariEiJ_G0013297	Rnf121 (MGP_PahariEiJ_G0013296)	Il18bp (MGP_PahariEiJ_G0013295)	Numa1 (MGP_PahariEiJ_G0013294)	Lrrc51 (MGP_PahariEiJ_G0013293)	Lamtor1 (MGP_PahariEiJ_G0013292)	Tomt (MGP_PahariEiJ_G0013291)	MGP_PahariEiJ_G0013290	Folr1 (MGP_PahariEiJ_G0013289) ##22	Folr2 (MGP_PahariEiJ_G0013288) ##22	Inppl1 (MGP_PahariEiJ_G0013287)	Phox2a (MGP_PahariEiJ_G0013286)	Clpb (MGP_PahariEiJ_G0013285)	Pde2a (MGP_PahariEiJ_G0013284)	Arap1 (MGP_PahariEiJ_G0013283)	Stard10 (MGP_PahariEiJ_G0013282)	Atg16l2 (MGP_PahariEiJ_G0013281)	Fchsd2 (MGP_PahariEiJ_G0013280)	P2ry2 (MGP_PahariEiJ_G0013279)	P2ry6 (MGP_PahariEiJ_G0013278)	Arhgef17 (MGP_PahariEiJ_G0013277)	Relt (MGP_PahariEiJ_G0013276)	Fam168a (MGP_PahariEiJ_G0013275)	Plekhb1 (MGP_PahariEiJ_G0013274)	Rab6a (MGP_PahariEiJ_G0013273)
Rat	MODERN SPECIES		Rhog (ENSRNOG00000020393)	Pgap2 (ENSRNOG00000020371)	Nup98 (ENSRNOG00000020347)	Chrna10 (ENSRNOG00000020293)	Art1 (ENSRNOG00000020251)	Art5 (ENSRNOG00000020242)	Trpc2 (ENSRNOG00000020188)	Rnf121 (ENSRNOG00000020175)	Il18bp (ENSRNOG00000020150)	Numa1 (ENSRNOG00000000417)	Lrrc51 (ENSRNOG00000020124)	LOC100361543 (ENSRNOG00000020016)	Lrtomt (ENSRNOG00000023434)	Anapc15 (ENSRNOG00000019936)	Folr1 (ENSRNOG00000019902) ##22	Folr2 (ENSRNOG00000019890) ##22	Inppl1 (ENSRNOG00000019730)	Phox2a (ENSRNOG00000019706)	Clpb (ENSRNOG00000019693)	Art2b (ENSRNOG00000019687)	Pde2a (ENSRNOG00000019560)	Arap1 (ENSRNOG00000019555)	Stard10 (ENSRNOG00000019491)	Atg16l2 (ENSRNOG00000019413)	AABR07004891.1 (ENSRNOG00000033196)	Fchsd2 (ENSRNOG00000019319)	P2ry2 (ENSRNOG00000019283)	P2ry6 (ENSRNOG00000019270)	Arhgef17 (ENSRNOG00000053502)	Relt (ENSRNOG00000025075)	Fam168a (ENSRNOG00000018873)
Tree shrew	MODERN SPECIES	4488													LRRC51 (ENSTBEG00000011970)	LAMTOR1 (ENSTBEG00000011982)	ENSTBEG00000012095	FOLR2 (ENSTBEG00000012107) ##22	INPPL1 (ENSTBEG00000012162)	ENSTBEG00000012297	CLPB (ENSTBEG00000012325)
Eutheria	ANCESTRAL SPECIES	3	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B
Euarchontoglires	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.b ##22
Euarchontoglires_A	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.b ##22
Glires	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.b ##22
Lagomorpha	ANCESTRAL SPECIES	5	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a.o	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Rabbit	MODERN SPECIES		ENSOCUG00000007307	ENSOCUG00000026823	ENSOCUG00000013630	ENSOCUG00000023526	ART1 (ENSOCUG00000022791)	ART5 (ENSOCUG00000025690)	ENSOCUG00000012313	ENSOCUG00000036297	RNF121 (ENSOCUG00000012317)	IL18BP (ENSOCUG00000012326)	NUMA1 (ENSOCUG00000012335)	LRRC51 (ENSOCUG00000000162)	LAMTOR1 (ENSOCUG00000000164)	TOMT (ENSOCUG00000026896)	ENSOCUG00000025778	ENSOCUG00000022850 ##22	INPPL1 (ENSOCUG00000000167)	PHOX2A (ENSOCUG00000000169)	CLPB (ENSOCUG00000017356)	ENSOCUG00000025696	PDE2A (ENSOCUG00000014917)	ENSOCUG00000021605	STARD10 (ENSOCUG00000021327)	ATG16L2 (ENSOCUG00000010446)	FCHSD2 (ENSOCUG00000010457)	P2RY6 (ENSOCUG00000017568)	ENSOCUG00000038016	ARHGEF17 (ENSOCUG00000029716)	RELT (ENSOCUG00000025119)	ENSOCUG00000000318	ENSOCUG00000024033
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Suina	ANCESTRAL SPECIES	5	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Chacoan peccary	MODERN SPECIES	32	PGAP2 (ENSCWAG00000000505)	NUP98 (ENSCWAG00000000443)	CHRNA10 (ENSCWAG00000000400)	ART1 (ENSCWAG00000000381)	ART5 (ENSCWAG00000000367)	ENSCWAG00000000298	ENSCWAG00000000261	ENSCWAG00000000254	RNF121 (ENSCWAG00000000171)	ENSCWAG00000000114	NUMA1 (ENSCWAG00000000058)	LRRC51 (ENSCWAG00000000017)	LAMTOR1 (ENSCWAG00000006187)	TOMT (ENSCWAG00000006156)	ANAPC15 (ENSCWAG00000006136)	ENSCWAG00000006114 ##22	ENSCWAG00000006091 ##22	FOLR2 (ENSCWAG00000006053) ##22	INPPL1 (ENSCWAG00000005975)	PHOX2A (ENSCWAG00000005947)	CLPB (ENSCWAG00000005766)	PDE2A (ENSCWAG00000004293)	ARAP1 (ENSCWAG00000003270)	STARD10 (ENSCWAG00000003131)	ATG16L2 (ENSCWAG00000003106)	FCHSD2 (ENSCWAG00000003033)	P2RY2 (ENSCWAG00000003004)	P2RY6 (ENSCWAG00000002997)	ARHGEF17 (ENSCWAG00000002950)	RELT (ENSCWAG00000002926)	FAM168A (ENSCWAG00000002905)
Pig	MODERN SPECIES	17	CHRNA10 (ENSSSCG00000014796)	ART1 (ENSSSCG00000038255)	ART5 (ENSSSCG00000062852)	ENSSSCG00000014799	ENSSSCG00000048448	ENSSSCG00000048507	RNF121 (ENSSSCG00000023796)	ENSSSCG00000014800	NUMA1 (ENSSSCG00000014802)	LRRC51 (ENSSSCG00000014803)	LAMTOR1 (ENSSSCG00000014804)	TOMT (ENSSSCG00000014805)	ANAPC15 (ENSSSCG00000014806)	ENSSSCG00000061202	ENSSSCG00000036853	ENSSSCG00000022236 ##22	ENSSSCG00000053501 ##22	FOLR2 (ENSSSCG00000014812) ##22	INPPL1 (ENSSSCG00000014811)	PHOX2A (ENSSSCG00000014813)	CLPB (ENSSSCG00000036887)	PDE2A (ENSSSCG00000029388)	ARAP1 (ENSSSCG00000014817)	STARD10 (ENSSSCG00000014818)	ATG16L2 (ENSSSCG00000014819)	FCHSD2 (ENSSSCG00000014820)	P2RY2 (ENSSSCG00000040207)	P2RY6 (ENSSSCG00000014823)	ENSSSCG00000014822	RELT (ENSSSCG00000014825)	FAM168A (ENSSSCG00000039996)
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Camelidae	ANCESTRAL SPECIES	32	ENSGT00390000000214.a.a	ENSGT00940000155158.a.a	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000161220	ENSGT00390000016789	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b	ENSGT00940000154769
Arabian camel	MODERN SPECIES	1	ENSCDRG00005001763	ENSCDRG00005001773	PGAP2 (ENSCDRG00005001795)	NUP98 (ENSCDRG00005001857)	CHRNA10 (ENSCDRG00005000126)	ART1 (ENSCDRG00005000164)	ART5 (ENSCDRG00005000179)	ENSCDRG00005000213	ENSCDRG00005000233	RNF121 (ENSCDRG00005000310)	ENSCDRG00005000432	NUMA1 (ENSCDRG00005000496)	LAMTOR1 (ENSCDRG00005000668)	LRRC51 (ENSCDRG00005000728)	TOMT (ENSCDRG00005000758)	ENSCDRG00005000800 ##22	INPPL1 (ENSCDRG00005000881)	PHOX2A (ENSCDRG00005000943)	CLPB (ENSCDRG00005001007)	PDE2A (ENSCDRG00005001163)	ARAP1 (ENSCDRG00005001520)	STARD10 (ENSCDRG00005001667)	ATG16L2 (ENSCDRG00005001813)	FCHSD2 (ENSCDRG00005001884)	P2RY2 (ENSCDRG00005001935)	P2RY6 (ENSCDRG00005001948)	ARHGEF17 (ENSCDRG00005001971)	RELT (ENSCDRG00005001998)	FAM168A (ENSCDRG00005002037)	PLEKHB1 (ENSCDRG00005002077)	RAB6A (ENSCDRG00005002194)
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Cetacea	ANCESTRAL SPECIES	4	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00510000047299	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00510000047299	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Narwhal	MODERN SPECIES	314	STIM1 (ENSMMNG00015019519)	RHOG (ENSMMNG00015019478)	PGAP2 (ENSMMNG00015019422)	NUP98 (ENSMMNG00015019329)	CHRNA10 (ENSMMNG00015019263)	ART1 (ENSMMNG00015019236)	ART5 (ENSMMNG00015019216)	ENSMMNG00015019184	RNF121 (ENSMMNG00015019068)	IL18BP (ENSMMNG00015019016)	NUMA1 (ENSMMNG00015018750)	LRRC51 (ENSMMNG00015018657)	ENSMMNG00015018617	TOMT (ENSMMNG00015018585)	ANAPC15 (ENSMMNG00015018557)	ENSMMNG00015018527 ##22	FOLR2 (ENSMMNG00015018497) ##22	INPPL1 (ENSMMNG00015018418)	PHOX2A (ENSMMNG00015018393)	CLPB (ENSMMNG00015018273)	PDE2A (ENSMMNG00015017771)	ARAP1 (ENSMMNG00015017106)	STARD10 (ENSMMNG00015016937)	ATG16L2 (ENSMMNG00015016662)	FCHSD2 (ENSMMNG00015016529)	P2RY2 (ENSMMNG00015016460)	P2RY6 (ENSMMNG00015016438)	ARHGEF17 (ENSMMNG00015016352)	RELT (ENSMMNG00015016271)	FAM168A (ENSMMNG00015016125)	PLEKHB1 (ENSMMNG00015015978)
Beluga whale	MODERN SPECIES	2	ENSDLEG00000007737	ENSDLEG00000007749	PGAP2 (ENSDLEG00000007756)	ENSDLEG00000007768	NUP98 (ENSDLEG00000007779)	CHRNA10 (ENSDLEG00000007812)	ART1 (ENSDLEG00000007819)	ART5 (ENSDLEG00000007822)	RNF121 (ENSDLEG00000007824)	IL18BP (ENSDLEG00000000045)	NUMA1 (ENSDLEG00000000083)	LRRC51 (ENSDLEG00000000220)	LAMTOR1 (ENSDLEG00000000237)	TOMT (ENSDLEG00000000250)	ENSDLEG00000000265	FOLR2 (ENSDLEG00000000287) ##22	FOLR1 (ENSDLEG00000000312) ##22	INPPL1 (ENSDLEG00000000346)	PHOX2A (ENSDLEG00000000479)	CLPB (ENSDLEG00000000504)	ARAP1 (ENSDLEG00000000824)	STARD10 (ENSDLEG00000001848)	ATG16L2 (ENSDLEG00000001882)	FCHSD2 (ENSDLEG00000002069)	P2RY2 (ENSDLEG00000002113)	P2RY6 (ENSDLEG00000002120)	ARHGEF17 (ENSDLEG00000002164)	RELT (ENSDLEG00000002338)	FAM168A (ENSDLEG00000002357)	PLEKHB1 (ENSDLEG00000002396)	RAB6A (ENSDLEG00000002432)
Vaquita	MODERN SPECIES	19	ENSPSNG00000007859	RRM1 (ENSPSNG00000007791)	STIM1 (ENSPSNG00000007692)	RHOG (ENSPSNG00000007639)	PGAP2 (ENSPSNG00000007538)	NUP98 (ENSPSNG00000007355)	CHRNA10 (ENSPSNG00000007246)	ART5 (ENSPSNG00000007093)	ENSPSNG00000006971	RNF121 (ENSPSNG00000006829)	IL18BP (ENSPSNG00000006755)	NUMA1 (ENSPSNG00000006651)	LRRC51 (ENSPSNG00000012109)	TOMT (ENSPSNG00000012048)	LAMTOR1 (ENSPSNG00000011884)	ENSPSNG00000011772 ##22	FOLR1 (ENSPSNG00000011710) ##22	FOLR2 (ENSPSNG00000011600) ##22	INPPL1 (ENSPSNG00000011413)	PHOX2A (ENSPSNG00000011331)	CLPB (ENSPSNG00000011155)	ENSPSNG00000010947	PDE2A (ENSPSNG00000010112)	ARAP1 (ENSPSNG00000009314)	STARD10 (ENSPSNG00000008954)	ATG16L2 (ENSPSNG00000008907)	FCHSD2 (ENSPSNG00000008732)	P2RY2 (ENSPSNG00000008662)	P2RY6 (ENSPSNG00000008640)	ARHGEF17 (ENSPSNG00000008413)	RELT (ENSPSNG00000008355)
Sperm whale	MODERN SPECIES	7	OR51E1 (ENSPCTG00005021430)	TRIM68 (ENSPCTG00005021408)	ENSPCTG00005021334	ENSPCTG00005021108	ENSPCTG00005020598	TRIM21 (ENSPCTG00005020532)	ENSPCTG00005020522	ENSPCTG00005020506	RRM1 (ENSPCTG00005020416)	STIM1 (ENSPCTG00005020347)	ENSPCTG00005020304	RNF121 (ENSPCTG00005020223)	IL18BP (ENSPCTG00005020194)	NUMA1 (ENSPCTG00005020137)	ENSPCTG00005020112	ENSPCTG00005020083 ##22	FOLR1 (ENSPCTG00005020027) ##22	FOLR2 (ENSPCTG00005019879) ##22	INPPL1 (ENSPCTG00005019784)	PHOX2A (ENSPCTG00005019740)	CLPB (ENSPCTG00005019599)	FCHSD2 (ENSPCTG00005019385)	ATG16L2 (ENSPCTG00005019127)	STARD10 (ENSPCTG00005019006)	P2RY6 (ENSPCTG00005018990)	PDE2A (ENSPCTG00005017229)	ENSPCTG00005017089	PLEKHB1 (ENSPCTG00005016848)	RAB6A (ENSPCTG00005016426)	ENSPCTG00005016368	MRPL48 (ENSPCTG00005016115)
Blue whale	MODERN SPECIES	19	PGAP2 (ENSBMSG00010020521)	NUP98 (ENSBMSG00010020322)	CHRNA10 (ENSBMSG00010020235)	ART1 (ENSBMSG00010020205)	ART5 (ENSBMSG00010020191)	ENSBMSG00010020160	ENSBMSG00010020144	ENSBMSG00010020130	ENSBMSG00010020113	RNF121 (ENSBMSG00010019983)	IL18BP (ENSBMSG00010019943)	NUMA1 (ENSBMSG00010019817)	LRRC51 (ENSBMSG00010019723)	TOMT (ENSBMSG00010019695)	LAMTOR1 (ENSBMSG00010019653)	ENSBMSG00010019619 ##22	FOLR1 (ENSBMSG00010019603) ##22	FOLR2 (ENSBMSG00010019571) ##22	INPPL1 (ENSBMSG00010019507)	PHOX2A (ENSBMSG00010019476)	CLPB (ENSBMSG00010019411)	ENSBMSG00010019360	PDE2A (ENSBMSG00010017836)	ARAP1 (ENSBMSG00010015454)	STARD10 (ENSBMSG00010015245)	ATG16L2 (ENSBMSG00010015158)	FCHSD2 (ENSBMSG00010015023)	P2RY2 (ENSBMSG00010014980)	P2RY6 (ENSBMSG00010014966)	ARHGEF17 (ENSBMSG00010014835)	RELT (ENSBMSG00010014757)
Pecora	ANCESTRAL SPECIES	7	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b.b.a.a	ENSGT01030000234601.c.b.b.a.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Yarkand deer	MODERN SPECIES		PGAP2 (ENSCHYG00000000203)	NUP98 (ENSCHYG00000000272)	ENSCHYG00000000378	CHRNA10 (ENSCHYG00000000388)	ENSCHYG00000000402	ENSCHYG00000000414	ENSCHYG00000000444	ENSCHYG00000000526	RNF121 (ENSCHYG00000000566)	IL18BP (ENSCHYG00000000670)	NUMA1 (ENSCHYG00000000708)	LRRC51 (ENSCHYG00000000894)	LAMTOR1 (ENSCHYG00000000930)	TOMT (ENSCHYG00000001000)	ANAPC15 (ENSCHYG00000001017)	ENSCHYG00000001069 ##22	INPPL1 (ENSCHYG00000001162)	ENSCHYG00000001307	PHOX2A (ENSCHYG00000001320)	CLPB (ENSCHYG00000001358)	ENSCHYG00000001438	PDE2A (ENSCHYG00000001472)	ARAP1 (ENSCHYG00000001833)	STARD10 (ENSCHYG00000002286)	ATG16L2 (ENSCHYG00000002383)	FCHSD2 (ENSCHYG00000002479)	ENSCHYG00000002551	P2RY2 (ENSCHYG00000002560)	P2RY6 (ENSCHYG00000002581)	ARHGEF17 (ENSCHYG00000002628)	RELT (ENSCHYG00000002882)
Percora_a	ANCESTRAL SPECIES	6	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b.b.a.a	ENSGT01030000234601.c.b.b.a.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Bovidae	ANCESTRAL SPECIES	6	ENSGT00940000160721	ENSGT01030000234601.c.a.a.m	ENSGT01030000234601.c.b.b.b.a.a	ENSGT01030000234601.c.b.b.a.a	ENSGT01030000234601.c.b.b.b.a.b	ENSGT01030000234601.c.b.b.a.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00970000197645	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Caprinae	ANCESTRAL SPECIES	6	ENSGT00940000160721	ENSGT01030000234601.c.a.a.m	ENSGT01030000234601.c.b.b.b.a.a	ENSGT01030000234601.c.b.b.a.a	ENSGT01030000234601.c.b.b.b.a.b	ENSGT01030000234601.c.b.b.a.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00970000197645	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	6	ENSOARG00020013439	ENSOARG00020013552	ENSOARG00020013614	ENSOARG00020013697	ENSOARG00020013752	ENSOARG00020013793	ENSOARG00020013849	ENSOARG00020014066	RNF121 (ENSOARG00020016264)	IL18BP (ENSOARG00020016566)	NUMA1 (ENSOARG00020016627)	LAMTOR1 (ENSOARG00020016969)	LRRC51 (ENSOARG00020017145)	TOMT (ENSOARG00020017336)	ENSOARG00020017387	ENSOARG00020017479 ##22	ENSOARG00020017508 ##22	FOLR2 (ENSOARG00020017568) ##22	ENSOARG00020017600	INPPL1 (ENSOARG00020017642)	PHOX2A (ENSOARG00020018005)	CLPB (ENSOARG00020018065)	PDE2A (ENSOARG00020018348)	ARAP1 (ENSOARG00020020836)	STARD10 (ENSOARG00020022516)	ATG16L2 (ENSOARG00020022612)	FCHSD2 (ENSOARG00020022738)	P2RY2 (ENSOARG00020023482)	P2RY6 (ENSOARG00020023489)	ARHGEF17 (ENSOARG00020023502)	RELT (ENSOARG00020023665)
Rambouillet Sheep	MODERN SPECIES	6	ENSOARG00020013552	ENSOARG00020013614	ENSOARG00020013697	ENSOARG00020013752	ENSOARG00020013793	ENSOARG00020013849	ENSOARG00020014066	RNF121 (ENSOARG00020016264)	IL18BP (ENSOARG00020016566)	NUMA1 (ENSOARG00020016627)	LAMTOR1 (ENSOARG00020016969)	LRRC51 (ENSOARG00020017145)	TOMT (ENSOARG00020017336)	ENSOARG00020017387	ENSOARG00020017479 ##22	ENSOARG00020017508 ##22	FOLR2 (ENSOARG00020017568) ##22	ENSOARG00020017600	INPPL1 (ENSOARG00020017642)	PHOX2A (ENSOARG00020018005)	CLPB (ENSOARG00020018065)	PDE2A (ENSOARG00020018348)	ARAP1 (ENSOARG00020020836)	STARD10 (ENSOARG00020022516)	ATG16L2 (ENSOARG00020022612)	FCHSD2 (ENSOARG00020022738)	P2RY2 (ENSOARG00020023482)	P2RY6 (ENSOARG00020023489)	ARHGEF17 (ENSOARG00020023502)	RELT (ENSOARG00020023665)	FAM168A (ENSOARG00020023710)
Goat	DUPLICATION
Goat	MODERN SPECIES	6	CHRNA10 (ENSCHIG00000023811)	ART1 (ENSCHIG00000011429)	ENSCHIG00000027131	ENSCHIG00000003722	ENSCHIG00000025475	ENSCHIG00000025150	ENSCHIG00000014777	ENSCHIG00000024154	RNF121 (ENSCHIG00000007617)	IL18BP (ENSCHIG00000011992)	NUMA1 (ENSCHIG00000007762)	LRRC51 (ENSCHIG00000020218)	LAMTOR1 (ENSCHIG00000012939)	TOMT (ENSCHIG00000017138)	ANAPC15 (ENSCHIG00000025108)	ENSCHIG00000026821 ##22	ENSCHIG00000021169 ##22	FOLR2 (ENSCHIG00000012684) ##22	INPPL1 (ENSCHIG00000015058)	PHOX2A (ENSCHIG00000017888)	CLPB (ENSCHIG00000027032)	PDE2A (ENSCHIG00000016802)	ENSCHIG00000024882	GLB1L3 (ENSCHIG00000022494)	ENSCHIG00000011110	ACAD8 (ENSCHIG00000011486)	THYN1 (ENSCHIG00000014867)	VPS26B (ENSCHIG00000017731)	ENSCHIG00000003542	ARAP1 (ENSCHIG00000015180)	STARD10 (ENSCHIG00000013843)
Goat	MODERN SPECIES	6	ART1 (ENSCHIG00000011429)	ENSCHIG00000027131	ENSCHIG00000003722	ENSCHIG00000025475	ENSCHIG00000025150	ENSCHIG00000014777	ENSCHIG00000024154	RNF121 (ENSCHIG00000007617)	IL18BP (ENSCHIG00000011992)	NUMA1 (ENSCHIG00000007762)	LRRC51 (ENSCHIG00000020218)	LAMTOR1 (ENSCHIG00000012939)	TOMT (ENSCHIG00000017138)	ANAPC15 (ENSCHIG00000025108)	ENSCHIG00000026821 ##22	ENSCHIG00000021169 ##22	FOLR2 (ENSCHIG00000012684) ##22	INPPL1 (ENSCHIG00000015058)	PHOX2A (ENSCHIG00000017888)	CLPB (ENSCHIG00000027032)	PDE2A (ENSCHIG00000016802)	ENSCHIG00000024882	GLB1L3 (ENSCHIG00000022494)	ENSCHIG00000011110	ACAD8 (ENSCHIG00000011486)	THYN1 (ENSCHIG00000014867)	VPS26B (ENSCHIG00000017731)	ENSCHIG00000003542	ARAP1 (ENSCHIG00000015180)	STARD10 (ENSCHIG00000013843)	ATG16L2 (ENSCHIG00000001510)
Bovinae	ANCESTRAL SPECIES	26	ENSGT00940000160721	ENSGT01030000234601.c.a.a.m	ENSGT01030000234601.c.b.b.b.a.a.b	ENSGT01030000234601.c.b.b.a.a	ENSGT01030000234601.c.b.b.b.a.b	ENSGT01030000234601.c.b.b.a.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00970000197645	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Bos	ANCESTRAL SPECIES	25	ENSGT00940000160721	ENSGT01030000234601.c.a.a.m	ENSGT01030000234601.c.b.b.b.a.a.b	ENSGT01030000234601.c.b.b.a.a	ENSGT01030000234601.c.b.b.b.a.b	ENSGT01030000234601.c.b.b.a.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00970000197645	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Bos_a	ANCESTRAL SPECIES	44	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT01030000234601.c.a.a.m	ENSGT01030000234601.c.b.b.b.a.a.b	ENSGT01030000234601.c.b.b.a.a	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00970000197645	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Domestic yak	MODERN SPECIES	4	RHOG (ENSBGRG00000011947)	PGAP2 (ENSBGRG00000011558)	NUP98 (ENSBGRG00000010590)	ART1 (ENSBGRG00000010516)	ENSBGRG00000010416	ENSBGRG00000010193	ENSBGRG00000009938	ENSBGRG00000009873	ENSBGRG00000009857	RNF121 (ENSBGRG00000009669)	IL18BP (ENSBGRG00000009609)	NUMA1 (ENSBGRG00000009339)	LRRC51 (ENSBGRG00000009230)	TOMT (ENSBGRG00000009185)	ENSBGRG00000008842	ENSBGRG00000008584 ##22	ENSBGRG00000008517	INPPL1 (ENSBGRG00000008145)	PHOX2A (ENSBGRG00000008074)	CLPB (ENSBGRG00000007580)	PDE2A (ENSBGRG00000006673)	ARAP1 (ENSBGRG00000006242)	STARD10 (ENSBGRG00000006123)	ATG16L2 (ENSBGRG00000006010)	FCHSD2 (ENSBGRG00000005680)	P2RY2 (ENSBGRG00000005652)	P2RY6 (ENSBGRG00000005634)	ARHGEF17 (ENSBGRG00000005527)	RELT (ENSBGRG00000005485)	ENSBGRG00000005457	FAM168A (ENSBGRG00000005377)
Wild yak	MODERN SPECIES	571											LAMTOR1 (ENSBMUG00000017696)	LRRC51 (ENSBMUG00000017749)	TOMT (ENSBMUG00000017777)	ENSBMUG00000017794	ENSBMUG00000017811	ENSBMUG00000017927 ##22	INPPL1 (ENSBMUG00000018036)	PHOX2A (ENSBMUG00000018065)	CLPB (ENSBMUG00000018178)	PDE2A (ENSBMUG00000018425)
Bos_b	ANCESTRAL SPECIES	40	ENSGT01030000234601.c.a.a.n	ENSGT01030000234601.c.b.b.b.a.a.b	ENSGT01030000234601.c.b.b.a.a.a	ENSGT01030000234601.c.b.b.b.a.b	ENSGT01030000234601.c.b.b.a.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT01100000263481.n.a.a.a.b.a.a.a.a.b.a.b.a.a.a	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00970000197645	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Hybrid Bos Indicus	MODERN SPECIES	6	ENSBIXG00005024803	ENSBIXG00005024814	ENSBIXG00005024838	ENSBIXG00005024846	ENSBIXG00005024873	ENSBIXG00005025004	ENSBIXG00005004267	ENSBIXG00005004268	RNF121 (ENSBIXG00005025224)	IL18BP (ENSBIXG00005025310)	NUMA1 (ENSBIXG00005025405)	LRRC51 (ENSBIXG00005025513)	ENSBIXG00005025581	TOMT (ENSBIXG00005025609)	ENSBIXG00005004369	ENSBIXG00005004401 ##22	INPPL1 (ENSBIXG00005025854)	PHOX2A (ENSBIXG00005004416)	CLPB (ENSBIXG00005026019)	PDE2A (ENSBIXG00005026297)	ARAP1 (ENSBIXG00005026681)	STARD10 (ENSBIXG00005007647)	ATG16L2 (ENSBIXG00005026829)	FCHSD2 (ENSBIXG00005026990)	P2RY2 (ENSBIXG00005004642)	P2RY6 (ENSBIXG00005027067)	ARHGEF17 (ENSBIXG00005027217)	RELT (ENSBIXG00005004708)	ENSBIXG00005005616	FAM168A (ENSBIXG00005027419)	PLEKHB1 (ENSBIXG00005027551)
Cow	DUPLICATION
Cow	MODERN SPECIES	6	ENSBTAG00000053052	ENSBTAG00000013997	ENSBTAG00000049953	ENSBTAG00000037826	ENSBTAG00000053949	ENSBTAG00000026796	ENSBTAG00000011549	RNF121 (ENSBTAG00000014167)	ENSBTAG00000049608	IL18BP (ENSBTAG00000027676)	NUMA1 (ENSBTAG00000018449)	LRRC51 (ENSBTAG00000017964)	LAMTOR1 (ENSBTAG00000003001)	TOMT (ENSBTAG00000003000)	ANAPC15 (ENSBTAG00000002999)	FOLR3 (ENSBTAG00000038532) ##22	FOLR1 (ENSBTAG00000021007) ##22	FOLR2 (ENSBTAG00000027684) ##22	ENSBTAG00000051491	INPPL1 (ENSBTAG00000019167)	PHOX2A (ENSBTAG00000019168)	CLPB (ENSBTAG00000001280)	PDE2A (ENSBTAG00000008419)	ENSBTAG00000050827	ARAP1 (ENSBTAG00000002051)	STARD10 (ENSBTAG00000015182)	ATG16L2 (ENSBTAG00000019059)	FCHSD2 (ENSBTAG00000019062)	P2RY2 (ENSBTAG00000039050)	P2RY6 (ENSBTAG00000038737)	ARHGEF17 (ENSBTAG00000012505)
Cow	MODERN SPECIES	6	ENSBTAG00000013997	ENSBTAG00000049953	ENSBTAG00000037826	ENSBTAG00000053949	ENSBTAG00000026796	ENSBTAG00000011549	RNF121 (ENSBTAG00000014167)	ENSBTAG00000049608	IL18BP (ENSBTAG00000027676)	NUMA1 (ENSBTAG00000018449)	LRRC51 (ENSBTAG00000017964)	LAMTOR1 (ENSBTAG00000003001)	TOMT (ENSBTAG00000003000)	ANAPC15 (ENSBTAG00000002999)	FOLR3 (ENSBTAG00000038532) ##22	FOLR1 (ENSBTAG00000021007) ##22	FOLR2 (ENSBTAG00000027684) ##22	ENSBTAG00000051491	INPPL1 (ENSBTAG00000019167)	PHOX2A (ENSBTAG00000019168)	CLPB (ENSBTAG00000001280)	PDE2A (ENSBTAG00000008419)	ENSBTAG00000050827	ARAP1 (ENSBTAG00000002051)	STARD10 (ENSBTAG00000015182)	ATG16L2 (ENSBTAG00000019059)	FCHSD2 (ENSBTAG00000019062)	P2RY2 (ENSBTAG00000039050)	P2RY6 (ENSBTAG00000038737)	ARHGEF17 (ENSBTAG00000012505)	RELT (ENSBTAG00000016494)
American bison	DUPLICATION
American bison	MODERN SPECIES	3200	PGAP2 (ENSBBBG00000013187)	NUP98 (ENSBBBG00000002654)	CHRNA10 (ENSBBBG00000013024)	ART1 (ENSBBBG00000013016)	ENSBBBG00000013002	ENSBBBG00000002587	ENSBBBG00000012985	ENSBBBG00000002576	RNF121 (ENSBBBG00000012902)	IL18BP (ENSBBBG00000012868)	NUMA1 (ENSBBBG00000012845)	LAMTOR1 (ENSBBBG00000012734)	LRRC51 (ENSBBBG00000002448)	TOMT (ENSBBBG00000012645)	ENSBBBG00000012636	ENSBBBG00000002417 ##22	ENSBBBG00000002412 ##22	FOLR2 (ENSBBBG00000002404) ##22	INPPL1 (ENSBBBG00000012547)	PHOX2A (ENSBBBG00000012496)	CLPB (ENSBBBG00000012470)	ENSBBBG00000012367	PDE2A (ENSBBBG00000012341)	ARAP1 (ENSBBBG00000012109)	STARD10 (ENSBBBG00000011810)	ATG16L2 (ENSBBBG00000011797)	FCHSD2 (ENSBBBG00000011759)	P2RY2 (ENSBBBG00000002152)	P2RY6 (ENSBBBG00000011676)	ARHGEF17 (ENSBBBG00000011654)	ENSBBBG00000002129
American bison	MODERN SPECIES	3200	NUP98 (ENSBBBG00000002654)	CHRNA10 (ENSBBBG00000013024)	ART1 (ENSBBBG00000013016)	ENSBBBG00000013002	ENSBBBG00000002587	ENSBBBG00000012985	ENSBBBG00000002576	RNF121 (ENSBBBG00000012902)	IL18BP (ENSBBBG00000012868)	NUMA1 (ENSBBBG00000012845)	LAMTOR1 (ENSBBBG00000012734)	LRRC51 (ENSBBBG00000002448)	TOMT (ENSBBBG00000012645)	ENSBBBG00000012636	ENSBBBG00000002417 ##22	ENSBBBG00000002412 ##22	FOLR2 (ENSBBBG00000002404) ##22	INPPL1 (ENSBBBG00000012547)	PHOX2A (ENSBBBG00000012496)	CLPB (ENSBBBG00000012470)	ENSBBBG00000012367	PDE2A (ENSBBBG00000012341)	ARAP1 (ENSBBBG00000012109)	STARD10 (ENSBBBG00000011810)	ATG16L2 (ENSBBBG00000011797)	FCHSD2 (ENSBBBG00000011759)	P2RY2 (ENSBBBG00000002152)	P2RY6 (ENSBBBG00000011676)	ARHGEF17 (ENSBBBG00000011654)	ENSBBBG00000002129	FAM168A (ENSBBBG00000002126)
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	1173	PGAP2 (ENSMMSG00000016954)	NUP98 (ENSMMSG00000016850)	CHRNA10 (ENSMMSG00000016794)	ART1 (ENSMMSG00000016761)	ENSMMSG00000016747	ENSMMSG00000016729	ENSMMSG00000016420	ENSMMSG00000014886	RNF121 (ENSMMSG00000014810)	IL18BP (ENSMMSG00000014781)	NUMA1 (ENSMMSG00000014564)	LRRC51 (ENSMMSG00000014508)	LAMTOR1 (ENSMMSG00000014476)	TOMT (ENSMMSG00000014459)	ANAPC15 (ENSMMSG00000014442)	ENSMMSG00000014429 ##22	ENSMMSG00000014412 ##22	FOLR2 (ENSMMSG00000014377) ##22	INPPL1 (ENSMMSG00000014225)	PHOX2A (ENSMMSG00000014186)	CLPB (ENSMMSG00000014071)	ENSMMSG00000014028	PDE2A (ENSMMSG00000013684)	ARAP1 (ENSMMSG00000013210)	STARD10 (ENSMMSG00000013122)	ATG16L2 (ENSMMSG00000013029)	FCHSD2 (ENSMMSG00000012938)	P2RY2 (ENSMMSG00000012914)	P2RY6 (ENSMMSG00000012905)	ARHGEF17 (ENSMMSG00000012780)	RELT (ENSMMSG00000012747)
Siberian musk deer	MODERN SPECIES	1173	NUP98 (ENSMMSG00000016850)	CHRNA10 (ENSMMSG00000016794)	ART1 (ENSMMSG00000016761)	ENSMMSG00000016747	ENSMMSG00000016729	ENSMMSG00000016420	ENSMMSG00000014886	RNF121 (ENSMMSG00000014810)	IL18BP (ENSMMSG00000014781)	NUMA1 (ENSMMSG00000014564)	LRRC51 (ENSMMSG00000014508)	LAMTOR1 (ENSMMSG00000014476)	TOMT (ENSMMSG00000014459)	ANAPC15 (ENSMMSG00000014442)	ENSMMSG00000014429 ##22	ENSMMSG00000014412 ##22	FOLR2 (ENSMMSG00000014377) ##22	INPPL1 (ENSMMSG00000014225)	PHOX2A (ENSMMSG00000014186)	CLPB (ENSMMSG00000014071)	ENSMMSG00000014028	PDE2A (ENSMMSG00000013684)	ARAP1 (ENSMMSG00000013210)	STARD10 (ENSMMSG00000013122)	ATG16L2 (ENSMMSG00000013029)	FCHSD2 (ENSMMSG00000012938)	P2RY2 (ENSMMSG00000012914)	P2RY6 (ENSMMSG00000012905)	ARHGEF17 (ENSMMSG00000012780)	RELT (ENSMMSG00000012747)	FAM168A (ENSMMSG00000012683)
Atlantogenata	ANCESTRAL SPECIES	321															ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22
Afrotheria	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.b ##22
Afrotheria_a	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.a.b ##22
Elephant	MODERN SPECIES	563	RHOG (ENSLAFG00000013078)	PGAP2 (ENSLAFG00000013072)	NUP98 (ENSLAFG00000013055)	CHRNA10 (ENSLAFG00000013051)	ART1 (ENSLAFG00000013048)	ART5 (ENSLAFG00000013046)	ENSLAFG00000020562	RNF121 (ENSLAFG00000005579)	IL18BP (ENSLAFG00000027369)	NUMA1 (ENSLAFG00000005585)	LRRC51 (ENSLAFG00000006134)	LAMTOR1 (ENSLAFG00000006135)	TOMT (ENSLAFG00000026865)	ANAPC15 (ENSLAFG00000006138)	FOLR2 (ENSLAFG00000028071) ##22	ENSLAFG00000006141 ##22	ENSLAFG00000000928 ##22	INPPL1 (ENSLAFG00000000930)	PHOX2A (ENSLAFG00000002004)	CLPB (ENSLAFG00000011447)	ENSLAFG00000027052	PDE2A (ENSLAFG00000013489)	ARAP1 (ENSLAFG00000004476)	STARD10 (ENSLAFG00000020772)	ATG16L2 (ENSLAFG00000000256)	FCHSD2 (ENSLAFG00000000261)	ENSLAFG00000027005	ENSLAFG00000029551	ENSLAFG00000032659	ENSLAFG00000028873	P2RY2 (ENSLAFG00000007522)
Hyrax	MODERN SPECIES	930																ENSPCAG00000015189 ##22
Tenrec	DUPLICATION
Tenrec	MODERN SPECIES	17977																ENSETEG00000019620 ##22
Tenrec	MODERN SPECIES	11633																ENSETEG00000015365 ##22
Xenarthra	ANCESTRAL SPECIES	157	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00390000000938	ENSGT00940000161220	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22
Armadillo	MODERN SPECIES	3577	PGAP2 (ENSDNOG00000048260)	NUP98 (ENSDNOG00000002694)	CHRNA10 (ENSDNOG00000040920)	ART1 (ENSDNOG00000002689)	ART5 (ENSDNOG00000002686)	ENSDNOG00000035106	RNF121 (ENSDNOG00000011868)	IL18BP (ENSDNOG00000040104)	NUMA1 (ENSDNOG00000011890)	LRRC51 (ENSDNOG00000031787)	LAMTOR1 (ENSDNOG00000031499)	ANAPC15 (ENSDNOG00000040394)	TOMT (ENSDNOG00000038196)	ENSDNOG00000038143 ##22	ENSDNOG00000000856 ##22	ENSDNOG00000003145 ##22
Eutheria	ANCESTRAL SPECIES	3	ENSGT00510000047299	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Atlantogenata	ANCESTRAL SPECIES	321																ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22
Xenarthra	ANCESTRAL SPECIES	157	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00390000000938	ENSGT00940000161220	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22
Armadillo	DUPLICATION
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	3577														ENSDNOG00000003145 ##22	ENSDNOG00000000856 ##22	ENSDNOG00000038143 ##22	TOMT (ENSDNOG00000038196)	ANAPC15 (ENSDNOG00000040394)	LAMTOR1 (ENSDNOG00000031499)	LRRC51 (ENSDNOG00000031787)	NUMA1 (ENSDNOG00000011890)	IL18BP (ENSDNOG00000040104)	RNF121 (ENSDNOG00000011868)	ENSDNOG00000035106	ART5 (ENSDNOG00000002686)	ART1 (ENSDNOG00000002689)	CHRNA10 (ENSDNOG00000040920)	NUP98 (ENSDNOG00000002694)	PGAP2 (ENSDNOG00000048260)	ENSDNOG00000034887	STIM1 (ENSDNOG00000042079)
Armadillo	MODERN SPECIES	3577	ENSDNOG00000034887	PGAP2 (ENSDNOG00000048260)	NUP98 (ENSDNOG00000002694)	CHRNA10 (ENSDNOG00000040920)	ART1 (ENSDNOG00000002689)	ART5 (ENSDNOG00000002686)	ENSDNOG00000035106	RNF121 (ENSDNOG00000011868)	IL18BP (ENSDNOG00000040104)	NUMA1 (ENSDNOG00000011890)	LRRC51 (ENSDNOG00000031787)	LAMTOR1 (ENSDNOG00000031499)	ANAPC15 (ENSDNOG00000040394)	TOMT (ENSDNOG00000038196)	ENSDNOG00000038143 ##22	ENSDNOG00000000856 ##22	ENSDNOG00000003145 ##22
Armadillo	MODERN SPECIES	1449																ENSDNOG00000042784 ##22	ID2 (ENSDNOG00000035918)	KIDINS220 (ENSDNOG00000002905)	MBOAT2 (ENSDNOG00000041557)	ENSDNOG00000041786	ASAP2 (ENSDNOG00000008886)	ITGB1BP1 (ENSDNOG00000008930)	CPSF3 (ENSDNOG00000008940)	IAH1 (ENSDNOG00000009272)	ADAM17 (ENSDNOG00000009284)	ENSDNOG00000033666	TAF1B (ENSDNOG00000018268)	GRHL1 (ENSDNOG00000014493)	KLF11 (ENSDNOG00000035689)	ENSDNOG00000047738	ENSDNOG00000012581
Sloth	MODERN SPECIES	11583																FOLR1 (ENSCHOG00000011849) ##22
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.b ##22
Hedgehog	MODERN SPECIES	13614																FOLR1 (ENSEEUG00000013915) ##22
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182
Carnivora	ANCESTRAL SPECIES	21	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B
Caniformia	ANCESTRAL SPECIES	17	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350
Ursidae	ANCESTRAL SPECIES	15	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B
Ursus	ANCESTRAL SPECIES	36	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.e ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Polar bear	MODERN SPECIES	302	RHOG (ENSUMAG00000006269)	PGAP2 (ENSUMAG00000006272)	NUP98 (ENSUMAG00000006347)	ENSUMAG00000006975	ART5 (ENSUMAG00000006976)	ENSUMAG00000006987	ENSUMAG00000007024	RNF121 (ENSUMAG00000007033)	ENSUMAG00000007047	NUMA1 (ENSUMAG00000007185)	LRRC51 (ENSUMAG00000007796)	LAMTOR1 (ENSUMAG00000007804)	TOMT (ENSUMAG00000007809)	ANAPC15 (ENSUMAG00000007818)	ENSUMAG00000007828 ##22	FOLR1 (ENSUMAG00000007838) ##22	INPPL1 (ENSUMAG00000007967)	CLPB (ENSUMAG00000008697)	PDE2A (ENSUMAG00000008789)	ARAP1 (ENSUMAG00000009450)	STARD10 (ENSUMAG00000009981)	ATG16L2 (ENSUMAG00000010010)	FCHSD2 (ENSUMAG00000010093)	ENSUMAG00000010124	P2RY6 (ENSUMAG00000010134)	ARHGEF17 (ENSUMAG00000010147)	ENSUMAG00000010218	ENSUMAG00000010221	FAM168A (ENSUMAG00000010224)	PLEKHB1 (ENSUMAG00000010228)	RAB6A (ENSUMAG00000010248)
American black bear	MODERN SPECIES	762													TOMT (ENSUAMG00000027366)	ANAPC15 (ENSUAMG00000027369)	ENSUAMG00000027372 ##22	FOLR1 (ENSUAMG00000027376) ##22
Giant Panda	MODERN SPECIES	18	RHOG (ENSAMEG00000019447)	PGAP2 (ENSAMEG00000010996)	NUP98 (ENSAMEG00000010984)	CHRNA10 (ENSAMEG00000010978)	ENSAMEG00000010969	ENSAMEG00000010962	ENSAMEG00000010951	ENSAMEG00000010937	RNF121 (ENSAMEG00000010909)	IL18BP (ENSAMEG00000010904)	NUMA1 (ENSAMEG00000010861)	LRRC51 (ENSAMEG00000024659)	LRTOMT (ENSAMEG00000010848)	LAMTOR1 (ENSAMEG00000010854)	ENSAMEG00000010833 ##22	FOLR1 (ENSAMEG00000030130) ##22	ENSAMEG00000005691 ##22	INPPL1 (ENSAMEG00000005610)	PHOX2A (ENSAMEG00000030169)	CLPB (ENSAMEG00000005592)	PDE2A (ENSAMEG00000005473)	ARAP1 (ENSAMEG00000005419)	STARD10 (ENSAMEG00000005382)	ATG16L2 (ENSAMEG00000005345)	FCHSD2 (ENSAMEG00000005338)	ENSAMEG00000028744	ENSAMEG00000031322	P2RY2 (ENSAMEG00000020290)	P2RY6 (ENSAMEG00000020289)	ENSAMEG00000030401	ARHGEF17 (ENSAMEG00000017303)
Mustelinae	ANCESTRAL SPECIES	25	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
American mink	MODERN SPECIES	6	NUP98 (ENSNVIG00000019281)	CHRNA10 (ENSNVIG00000019515)	ART1 (ENSNVIG00000019532)	ART5 (ENSNVIG00000019550)	ENSNVIG00000019569	ENSNVIG00000019681	RNF121 (ENSNVIG00000019697)	IL18BP (ENSNVIG00000019730)	NUMA1 (ENSNVIG00000019788)	LRC51 (ENSNVIG00000020391)	LAMTOR1 (ENSNVIG00000020491)	TOMT (ENSNVIG00000020502)	ANAPC15 (ENSNVIG00000020507)	ENSNVIG00000020543 ##22	ENSNVIG00000020551 ##22	FOLR1 (ENSNVIG00000020559) ##22	ENSNVIG00000020566 ##22	INPPL1 (ENSNVIG00000020582)	PHOX2A (ENSNVIG00000020687)	CLPB (ENSNVIG00000020719)	ENSNVIG00000020914	PDE2A (ENSNVIG00000020947)	ARAP1 (ENSNVIG00000021233)	STARD10 (ENSNVIG00000021483)	ENSNVIG00000021493	ATG16L2 (ENSNVIG00000021501)	FCSD2 (ENSNVIG00000021556)	P2RY2 (ENSNVIG00000021667)	P2RY6 (ENSNVIG00000021669)	ARHGEF17 (ENSNVIG00000021682)	RELT (ENSNVIG00000021738)
Ferret	MODERN SPECIES	294	RHOG (ENSMPUG00000019537)	PGAP2 (ENSMPUG00000010449)	NUP98 (ENSMPUG00000010422)	CHRNA10 (ENSMPUG00000010400)	ART1 (ENSMPUG00000010384)	ART5 (ENSMPUG00000010377)	ENSMPUG00000010374	ENSMPUG00000010369	ENSMPUG00000010361	RNF121 (ENSMPUG00000010355)	IL18BP (ENSMPUG00000010336)	NUMA1 (ENSMPUG00000010323)	LRRC51 (ENSMPUG00000010315)	LAMTOR1 (ENSMPUG00000010289)	ANAPC15 (ENSMPUG00000010260)	FOLR1 (ENSMPUG00000010228) ##22	FOLR2 (ENSMPUG00000010223) ##22	INPPL1 (ENSMPUG00000010200)	PHOX2A (ENSMPUG00000010182)	ENSMPUG00000010180	CLPB (ENSMPUG00000010173)	PDE2A (ENSMPUG00000009843)	ARAP1 (ENSMPUG00000009828)	STARD10 (ENSMPUG00000009791)	ATG16L2 (ENSMPUG00000009778)	FCHSD2 (ENSMPUG00000009765)	ENSMPUG00000009762	P2RY2 (ENSMPUG00000019536)	P2RY6 (ENSMPUG00000009759)	ARHGEF17 (ENSMPUG00000009751)	RELT (ENSMPUG00000009744)
Canidae	ANCESTRAL SPECIES	17	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b.l ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.k ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B
Red fox	DUPLICATION
Red fox	MODERN SPECIES	81	RHOG (ENSVVUG00000025684)	PGAP2 (ENSVVUG00000025679)	NUP98 (ENSVVUG00000025664)	CHRNA10 (ENSVVUG00000025660)	ART1 (ENSVVUG00000025659)	ART5 (ENSVVUG00000025657)	ENSVVUG00000025651	ENSVVUG00000025645	RNF121 (ENSVVUG00000025638)	ENSVVUG00000025635	NUMA1 (ENSVVUG00000025398)	LAMTOR1 (ENSVVUG00000025355)	LRRC51 (ENSVVUG00000025353)	ANAPC15 (ENSVVUG00000025345)	ENSVVUG00000025344 ##22	ENSVVUG00000025341 ##22	ENSVVUG00000025340 ##22	INPPL1 (ENSVVUG00000024927)	CLPB (ENSVVUG00000024879)	PDE2A (ENSVVUG00000024655)	ARAP1 (ENSVVUG00000024634)	STARD10 (ENSVVUG00000024630)	ENSVVUG00000024628	ENSVVUG00000024623	FCHSD2 (ENSVVUG00000024614)	P2RY2 (ENSVVUG00000024610)	ENSVVUG00000024605	ARHGEF17 (ENSVVUG00000024591)	RELT (ENSVVUG00000024567)	FAM168A (ENSVVUG00000024558)	PLEKHB1 (ENSVVUG00000024552)
Red fox	MODERN SPECIES	61	NNMT (ENSVVUG00000016281)	ENSVVUG00000016275	ZBTB16 (ENSVVUG00000016272)	HTR3A (ENSVVUG00000016249)	HTR3B (ENSVVUG00000016234)	USP28 (ENSVVUG00000016186)	CLDN25 (ENSVVUG00000016173)	ZW10 (ENSVVUG00000016132)	DRD2 (ENSVVUG00000016119)	ANKK1 (ENSVVUG00000016115)	TTC12 (ENSVVUG00000016067)	ENSVVUG00000016052	NCAM1 (ENSVVUG00000016037)	ENSVVUG00000016025	ENSVVUG00000016018	ENSVVUG00000015988 ##22	ENSVVUG00000015984	PTS (ENSVVUG00000015979)	BCO2 (ENSVVUG00000015967)	TEX12 (ENSVVUG00000015963)	IL18 (ENSVVUG00000015952)	SDHD (ENSVVUG00000015950)	ENSVVUG00000015949	ENSVVUG00000015945	ENSVVUG00000015941	DLAT (ENSVVUG00000015934)	DIXDC1 (ENSVVUG00000015914)	C11orf52 (ENSVVUG00000015902)	HSPB2 (ENSVVUG00000015899)	ENSVVUG00000015896	CRYAB (ENSVVUG00000015883)
Canis_lupus	ANCESTRAL SPECIES	21	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b.l ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.k ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000174692	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350
Dog	MODERN SPECIES	13	RHOG (ENSCAFG00845011526)	PGAP2 (ENSCAFG00845011486)	NUP98 (ENSCAFG00845011368)	CHRNA10 (ENSCAFG00845011302)	ENSCAFG00845011268	ENSCAFG00845011208	TRPC2 (ENSCAFG00845011165)	XNDC1 (ENSCAFG00845011096)	RNF121 (ENSCAFG00845010940)	NUMA1 (ENSCAFG00845010789)	LRTOMT (ENSCAFG00845010690)	LAMTOR1 (ENSCAFG00845010589)	TOMT (ENSCAFG00845010540)	ANAPC15 (ENSCAFG00845010469)	ENSCAFG00845010402 ##22	FOLR1 (ENSCAFG00845010357) ##22	ENSCAFG00845010325 ##22	INPPL1 (ENSCAFG00845010236)	PHOX2A (ENSCAFG00845010206)	CLPB (ENSCAFG00845010091)	PDE2A (ENSCAFG00845009737)	ARAP1 (ENSCAFG00845009338)	STARD10 (ENSCAFG00845009210)	ATG16L2 (ENSCAFG00845009039)	FCHSD2 (ENSCAFG00845008848)	P2RY2 (ENSCAFG00845008786)	P2RY6 (ENSCAFG00845008745)	ENSCAFG00845008725	ARHGEF17 (ENSCAFG00845008396)	RELT (ENSCAFG00845008255)	FAM168A (ENSCAFG00845008112)
Dingo	MODERN SPECIES	231	RHOG (ENSCAFG00020008715)	PGAP2 (ENSCAFG00020008711)	NUP98 (ENSCAFG00020005128)	CHRNA10 (ENSCAFG00020005002)	ART1 (ENSCAFG00020004997)	ART5 (ENSCAFG00020004990)	ENSCAFG00020004954	ENSCAFG00020004938	RNF121 (ENSCAFG00020004929)	IL18BP (ENSCAFG00020004928)	NUMA1 (ENSCAFG00020004656)	LRRC51 (ENSCAFG00020004626)	LAMTOR1 (ENSCAFG00020004625)	TOMT (ENSCAFG00020004624)	ANAPC15 (ENSCAFG00020004608)	FOLR1 (ENSCAFG00020004601) ##22	FOLR2 (ENSCAFG00020004597) ##22	ENSCAFG00020004594	INPPL1 (ENSCAFG00020003281)	PHOX2A (ENSCAFG00020003232)	CLPB (ENSCAFG00020003227)	PDE2A (ENSCAFG00020002505)	ENSCAFG00020002418	ARAP1 (ENSCAFG00020002397)	STARD10 (ENSCAFG00020002390)	ATG16L2 (ENSCAFG00020002305)	FCHSD2 (ENSCAFG00020002270)	P2RY2 (ENSCAFG00020002261)	ARHGEF17 (ENSCAFG00020002239)	RELT (ENSCAFG00020002227)	FAM168A (ENSCAFG00020002220)
Felidae	ANCESTRAL SPECIES		ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b.n ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.m ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Panthera	ANCESTRAL SPECIES	23	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b.n ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.m ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Panthera_a	ANCESTRAL SPECIES	24	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.b.n ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.m ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000164915	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
leopard	MODERN SPECIES	17	RHOG (ENSPPRG00000015051)	PGAP2 (ENSPPRG00000022873)	NUP98 (ENSPPRG00000014752)	CHRNA10 (ENSPPRG00000010582)	ART1 (ENSPPRG00000009923)	ART5 (ENSPPRG00000009698)	ENSPPRG00000007040	ENSPPRG00000002481	RNF121 (ENSPPRG00000001694)	IL18BP (ENSPPRG00000000197)	NUMA1 (ENSPPRG00000023604)	LAMTOR1 (ENSPPRG00000013024)	LRRC51 (ENSPPRG00000011210)	ENSPPRG00000009205	ENSPPRG00000005948 ##22	FOLR1 (ENSPPRG00000005454) ##22	ENSPPRG00000004560 ##22	INPPL1 (ENSPPRG00000003083)	PHOX2A (ENSPPRG00000001283)	CLPB (ENSPPRG00000000557)	PDE2A (ENSPPRG00000023412)	ARAP1 (ENSPPRG00000008707)	STARD10 (ENSPPRG00000001129)	ATG16L2 (ENSPPRG00000000060)	FCHSD2 (ENSPPRG00000022831)	ENSPPRG00000020298	P2RY2 (ENSPPRG00000020257)	P2RY6 (ENSPPRG00000020229)	ARHGEF17 (ENSPPRG00000014870)	RELT (ENSPPRG00000013581)	FAM168A (ENSPPRG00000013109)
lion	MODERN SPECIES	10	RHOG (ENSPLOG00000014243)	PGAP2 (ENSPLOG00000014136)	NUP98 (ENSPLOG00000014019)	CHRNA10 (ENSPLOG00000013799)	ART1 (ENSPLOG00000013731)	ART5 (ENSPLOG00000013634)	ENSPLOG00000013405	ENSPLOG00000013320	RNF121 (ENSPLOG00000013183)	IL18BP (ENSPLOG00000013073)	NUMA1 (ENSPLOG00000012852)	LRRC51 (ENSPLOG00000012646)	LAMTOR1 (ENSPLOG00000012386)	TOMT (ENSPLOG00000012315)	ANAPC15 (ENSPLOG00000012268)	FOLR1 (ENSPLOG00000012134) ##22	FOLR2 (ENSPLOG00000012003) ##22	INPPL1 (ENSPLOG00000011628)	PHOX2A (ENSPLOG00000011573)	CLPB (ENSPLOG00000011134)	PDE2A (ENSPLOG00000010134)	ARAP1 (ENSPLOG00000009729)	STARD10 (ENSPLOG00000009602)	ATG16L2 (ENSPLOG00000009517)	FCHSD2 (ENSPLOG00000009289)	ENSPLOG00000009165	P2RY2 (ENSPLOG00000009141)	P2RY6 (ENSPLOG00000009126)	ARHGEF17 (ENSPLOG00000008864)	RELT (ENSPLOG00000008764)	FAM168A (ENSPLOG00000008699)
Tiger	MODERN SPECIES	152			ENSPTIG00000014923	CHRNA10 (ENSPTIG00000013924)	ART1 (ENSPTIG00000013219)	ART5 (ENSPTIG00000011272)	ENSPTIG00000010671	ENSPTIG00000006066	RNF121 (ENSPTIG00000021115)	IL18BP (ENSPTIG00000017522)	ENSPTIG00000022066	LAMTOR1 (ENSPTIG00000021978)	LRRC51 (ENSPTIG00000018565)	ANAPC15 (ENSPTIG00000010352)	ENSPTIG00000008701 ##22	FOLR1 (ENSPTIG00000006891) ##22	ENSPTIG00000003296 ##22	INPPL1 (ENSPTIG00000014051)	CLPB (ENSPTIG00000010499)	PDE2A (ENSPTIG00000015974)	ARAP1 (ENSPTIG00000012516)	STARD10 (ENSPTIG00000009966)	ATG16L2 (ENSPTIG00000007319)	FCHSD2 (ENSPTIG00000020988)	ENSPTIG00000007385	ARHGEF17 (ENSPTIG00000016554)	RELT (ENSPTIG00000015677)	FAM168A (ENSPTIG00000014083)	PLEKHB1 (ENSPTIG00000011036)	RAB6A (ENSPTIG00000007843)	MRPL48 (ENSPTIG00000020025)
Cat	MODERN SPECIES	241	PGAP2 (ENSFCAG00000003743)	NUP98 (ENSFCAG00000003741)	CHRNA10 (ENSFCAG00000023105)	ART1 (ENSFCAG00000031838)	ART5 (ENSFCAG00000031739)	TRPC2 (ENSFCAG00000026180)	XNDC1 (ENSFCAG00000044053)	RNF121 (ENSFCAG00000005315)	IL18BP (ENSFCAG00000040011)	NUMA1 (ENSFCAG00000005317)	LRRC51 (ENSFCAG00000005319)	LAMTOR1 (ENSFCAG00000005320)	TOMT (ENSFCAG00000043134)	ANAPC15 (ENSFCAG00000005321)	ENSFCAG00000006996 ##22	FOLR1 (ENSFCAG00000036714) ##22	ENSFCAG00000033570 ##22	INPPL1 (ENSFCAG00000005323)	PHOX2A (ENSFCAG00000005324)	CLPB (ENSFCAG00000005325)	PDE2A (ENSFCAG00000013190)	ARAP1 (ENSFCAG00000013192)	STARD10 (ENSFCAG00000026356)	ATG16L2 (ENSFCAG00000013194)	FCHSD2 (ENSFCAG00000031954)	ENSFCAG00000034489	P2RY2 (ENSFCAG00000032749)	P2RY6 (ENSFCAG00000035630)	ARHGEF17 (ENSFCAG00000002868)	RELT (ENSFCAG00000002869)	FAM168A (ENSFCAG00000037723)
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350
Chiroptera	ANCESTRAL SPECIES	5	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00390000000214.a.a	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Microbat	MODERN SPECIES	1075	RHOG (ENSMLUG00000027901)	PGAP2 (ENSMLUG00000015895)	NUP98 (ENSMLUG00000013592)	CHRNA10 (ENSMLUG00000013586)	ART1 (ENSMLUG00000013578)	ART5 (ENSMLUG00000013574)	ENSMLUG00000028388	RNF121 (ENSMLUG00000006527)	IL18BP (ENSMLUG00000029213)	NUMA1 (ENSMLUG00000014098)	LRRC51 (ENSMLUG00000014114)	LAMTOR1 (ENSMLUG00000014117)	TOMT (ENSMLUG00000025239)	ENSMLUG00000014120	ENSMLUG00000014124 ##22	FOLR1 (ENSMLUG00000014126) ##22	ENSMLUG00000014128 ##22	INPPL1 (ENSMLUG00000014132)	CLPB (ENSMLUG00000005040)	ENSMLUG00000024247	ENSMLUG00000022772	ENSMLUG00000025882	PDE2A (ENSMLUG00000015598)	ENSMLUG00000000196	STARD10 (ENSMLUG00000029324)	ATG16L2 (ENSMLUG00000000211)	FCHSD2 (ENSMLUG00000000220)	P2RY2 (ENSMLUG00000002983)
Greater horseshoe bat	MODERN SPECIES	2	STIM1 (ENSRFEG00010014649)	RHOG (ENSRFEG00010015335)	PGAP2 (ENSRFEG00010015357)	NUP98 (ENSRFEG00010015605)	CHRNA10 (ENSRFEG00010015924)	ART1 (ENSRFEG00010016058)	ART5 (ENSRFEG00010016096)	ENSRFEG00010016166	RNF121 (ENSRFEG00010010346)	IL18BP (ENSRFEG00010010534)	NUMA1 (ENSRFEG00010010639)	LAMTOR1 (ENSRFEG00010010839)	LRRC51 (ENSRFEG00010010949)	TOMT (ENSRFEG00010011112)	ANAPC15 (ENSRFEG00010011178)	FOLR1 (ENSRFEG00010011239) ##22	FOLR2 (ENSRFEG00010011288) ##22	INPPL1 (ENSRFEG00010011424)	PHOX2A (ENSRFEG00010011524)	CLPB (ENSRFEG00010011603)	ENSRFEG00010011712	PDE2A (ENSRFEG00010011847)	ARAP1 (ENSRFEG00010012250)	STARD10 (ENSRFEG00010013919)	ATG16L2 (ENSRFEG00010014159)	FCHSD2 (ENSRFEG00010014285)	P2RY2 (ENSRFEG00010014467)	P2RY6 (ENSRFEG00010014485)	ARHGEF17 (ENSRFEG00010014519)	RELT (ENSRFEG00010014926)	FAM168A (ENSRFEG00010014954)
Equus	DUPLICATION
Equus	ANCESTRAL SPECIES	15	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b.e ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350
Donkey	MODERN SPECIES	12	RHOG (ENSEASG00005030666)	PGAP2 (ENSEASG00005000745)	NUP98 (ENSEASG00005000732)	CHRNA10 (ENSEASG00005000710)	ENSEASG00005000701	ENSEASG00005000693	ENSEASG00005000652	RNF121 (ENSEASG00005000646)	IL18BP (ENSEASG00005000642)	NUMA1 (ENSEASG00005000629)	LRRC51 (ENSEASG00005028135)	LAMTOR1 (ENSEASG00005000587)	TOMT (ENSEASG00005026047)	ANAPC15 (ENSEASG00005000567)	ENSEASG00005000538 ##22	ENSEASG00005000521 ##22	ENSEASG00005000519 ##22	INPPL1 (ENSEASG00005000512)	PHOX2A (ENSEASG00005000504)	CLPB (ENSEASG00005000496)	ENSEASG00005000491	PDE2A (ENSEASG00005000469)	ARAP1 (ENSEASG00005000447)	ATG16L2 (ENSEASG00005000424)	STARD10 (ENSEASG00005000436)	FCHSD2 (ENSEASG00005000113)	P2RY6 (ENSEASG00005023731)	ENSEASG00005032767	ARHGEF17 (ENSEASG00005017963)	RELT (ENSEASG00005017959)	FAM168A (ENSEASG00005017956)
Horse	MODERN SPECIES	28	STIM1 (ENSECAG00000022968)	RHOG (ENSECAG00000022965)	PGAP2 (ENSECAG00000021514)	NUP98 (ENSECAG00000015336)	ENSECAG00000055775	CHRNA10 (ENSECAG00000015284)	ART1 (ENSECAG00000015210)	ART5 (ENSECAG00000014500)	TRPC2 (ENSECAG00000013026)	XNDC1 (ENSECAG00000042118)	RNF121 (ENSECAG00000010511)	NUMA1 (ENSECAG00000023455)	LAMTOR1 (ENSECAG00000022080)	TOMT (ENSECAG00000022725)	ANAPC15 (ENSECAG00000048740)	ENSECAG00000020411 ##22	FOLR2 (ENSECAG00000018619) ##22	INPPL1 (ENSECAG00000017064)	PHOX2A (ENSECAG00000016514)	CLPB (ENSECAG00000011419)	ENSECAG00000028304	PDE2A (ENSECAG00000018696)	ARAP1 (ENSECAG00000016491)	STARD10 (ENSECAG00000015358)	ATG16L2 (ENSECAG00000013038)	FCHSD2 (ENSECAG00000011163)	P2RY2 (ENSECAG00000010577)	P2RY6 (ENSECAG00000038231)	ENSECAG00000050821	ARHGEF17 (ENSECAG00000008571)	RELT (ENSECAG00000007476)
Equus	ANCESTRAL SPECIES	12	ENSGT00390000013264.d	ENSGT00390000010172	ENSGT00390000003428	ENSGT00940000164461	ENSGT00440000033811	ENSGT00940000161471	ENSGT00940000159453	ENSGT00940000158640	ENSGT00940000162193	ENSGT00510000048726	ENSGT00940000160654	ENSGT00940000157580	ENSGT00390000005261	ENSGT00500000044920	ENSGT00940000156710	ENSGT00950000183144.A.i.a.b.f ##22	ENSGT00940000155626	ENSGT00940000156021	ENSGT00940000156043	ENSGT00390000003601.b	ENSGT00940000158757	ENSGT01080000257472	ENSGT00390000011192	ENSGT00940000158643	ENSGT00940000153284.b	ENSGT00390000013532	ENSGT00390000008110	ENSGT00390000014817	ENSGT00940000156935	ENSGT00510000048509	ENSGT00530000063690.a.b.a.b
Horse	MODERN SPECIES	22	SRP72 (ENSECAG00000006920)	PAICS (ENSECAG00000019862)	PPAT (ENSECAG00000023644)	ENSECAG00000001025	CRACD (ENSECAG00000013781)	AASDH (ENSECAG00000009502)	CEP135 (ENSECAG00000014393)	EXOC1 (ENSECAG00000023793)	EXOC1L (ENSECAG00000035811)	NMU (ENSECAG00000025148)	PDCL2 (ENSECAG00000025160)	CLOCK (ENSECAG00000006331)	TMEM165 (ENSECAG00000018843)	SRD5A3 (ENSECAG00000047094)	KDR (ENSECAG00000019429)	ENSECAG00000011833 ##22	KIT (ENSECAG00000012032)	PDGFRA (ENSECAG00000018176)	CHIC2 (ENSECAG00000014019)	GSX2 (ENSECAG00000013430)	LNX1 (ENSECAG00000017017)	FIP1L1 (ENSECAG00000019415)	SCFD2 (ENSECAG00000002235)	RASL11B (ENSECAG00000003789)	USP46 (ENSECAG00000009006)	SPATA18 (ENSECAG00000017782)	SGCB (ENSECAG00000020148)	LRRC66 (ENSECAG00000022299)	DCUN1D4 (ENSECAG00000023996)	CWH43 (ENSECAG00000024870)	OCIAD2 (ENSECAG00000024972)
Donkey	MODERN SPECIES	22	ARL9 (ENSEASG00005036423)	SRP72 (ENSEASG00005017747)	ENSEASG00005017751	PPAT (ENSEASG00005017759)	AASDH (ENSEASG00005017782)	CRACD (ENSEASG00005017786)	CEP135 (ENSEASG00005017805)	EXOC1 (ENSEASG00005018001)	EXOC1L (ENSEASG00005018850)	NMU (ENSEASG00005038160)	PDCL2 (ENSEASG00005018854)	CLOCK (ENSEASG00005018895)	TMEM165 (ENSEASG00005019466)	SRD5A3 (ENSEASG00005019468)	KDR (ENSEASG00005019475)	ENSEASG00005019484 ##22	KIT (ENSEASG00005019490)	ENSEASG00005024773	PDGFRA (ENSEASG00005019499)	GSX2 (ENSEASG00005019509)	CHIC2 (ENSEASG00005033054)	LNX1 (ENSEASG00005019513)	ENSEASG00005019566	SCFD2 (ENSEASG00005019936)	RASL11B (ENSEASG00005024651)	USP46 (ENSEASG00005019951)	SPATA18 (ENSEASG00005037001)	SGCB (ENSEASG00005004301)	LRRC66 (ENSEASG00005004297)	DCUN1D4 (ENSEASG00005014327)	CWH43 (ENSEASG00005014324)
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Cetacea	ANCESTRAL SPECIES	4	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00510000047299	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00510000047299	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00940000155158.b	ENSGT00510000047299	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Narwhal	DUPLICATION
Narwhal	DUPLICATION
Narwhal	MODERN SPECIES	221																ENSMMNG00015007481 ##22
Narwhal	MODERN SPECIES	141																ENSMMNG00015001474 ##22
Narwhal	MODERN SPECIES	82																ENSMMNG00015004740 ##22
Beluga whale	MODERN SPECIES	2	ENSDLEG00000007749	PGAP2 (ENSDLEG00000007756)	ENSDLEG00000007768	NUP98 (ENSDLEG00000007779)	CHRNA10 (ENSDLEG00000007812)	ART1 (ENSDLEG00000007819)	ART5 (ENSDLEG00000007822)	RNF121 (ENSDLEG00000007824)	IL18BP (ENSDLEG00000000045)	NUMA1 (ENSDLEG00000000083)	LRRC51 (ENSDLEG00000000220)	LAMTOR1 (ENSDLEG00000000237)	TOMT (ENSDLEG00000000250)	ENSDLEG00000000265	FOLR2 (ENSDLEG00000000287) ##22	FOLR1 (ENSDLEG00000000312) ##22	INPPL1 (ENSDLEG00000000346)	PHOX2A (ENSDLEG00000000479)	CLPB (ENSDLEG00000000504)	ARAP1 (ENSDLEG00000000824)	STARD10 (ENSDLEG00000001848)	ATG16L2 (ENSDLEG00000001882)	FCHSD2 (ENSDLEG00000002069)	P2RY2 (ENSDLEG00000002113)	P2RY6 (ENSDLEG00000002120)	ARHGEF17 (ENSDLEG00000002164)	RELT (ENSDLEG00000002338)	FAM168A (ENSDLEG00000002357)	PLEKHB1 (ENSDLEG00000002396)	RAB6A (ENSDLEG00000002432)	ENSDLEG00000002441
Vaquita	MODERN SPECIES	19	RRM1 (ENSPSNG00000007791)	STIM1 (ENSPSNG00000007692)	RHOG (ENSPSNG00000007639)	PGAP2 (ENSPSNG00000007538)	NUP98 (ENSPSNG00000007355)	CHRNA10 (ENSPSNG00000007246)	ART5 (ENSPSNG00000007093)	ENSPSNG00000006971	RNF121 (ENSPSNG00000006829)	IL18BP (ENSPSNG00000006755)	NUMA1 (ENSPSNG00000006651)	LRRC51 (ENSPSNG00000012109)	TOMT (ENSPSNG00000012048)	LAMTOR1 (ENSPSNG00000011884)	ENSPSNG00000011772 ##22	FOLR1 (ENSPSNG00000011710) ##22	FOLR2 (ENSPSNG00000011600) ##22	INPPL1 (ENSPSNG00000011413)	PHOX2A (ENSPSNG00000011331)	CLPB (ENSPSNG00000011155)	ENSPSNG00000010947	PDE2A (ENSPSNG00000010112)	ARAP1 (ENSPSNG00000009314)	STARD10 (ENSPSNG00000008954)	ATG16L2 (ENSPSNG00000008907)	FCHSD2 (ENSPSNG00000008732)	P2RY2 (ENSPSNG00000008662)	P2RY6 (ENSPSNG00000008640)	ARHGEF17 (ENSPSNG00000008413)	RELT (ENSPSNG00000008355)	FAM168A (ENSPSNG00000008263)
Dolphin	MODERN SPECIES	2328													LRRC51 (ENSTTRG00000010748)	LAMTOR1 (ENSTTRG00000010763)	ANAPC15 (ENSTTRG00000010773)	FOLR1 (ENSTTRG00000010780) ##22
Sperm whale	MODERN SPECIES	7	TRIM68 (ENSPCTG00005021408)	ENSPCTG00005021334	ENSPCTG00005021108	ENSPCTG00005020598	TRIM21 (ENSPCTG00005020532)	ENSPCTG00005020522	ENSPCTG00005020506	RRM1 (ENSPCTG00005020416)	STIM1 (ENSPCTG00005020347)	ENSPCTG00005020304	RNF121 (ENSPCTG00005020223)	IL18BP (ENSPCTG00005020194)	NUMA1 (ENSPCTG00005020137)	ENSPCTG00005020112	ENSPCTG00005020083 ##22	FOLR1 (ENSPCTG00005020027) ##22	FOLR2 (ENSPCTG00005019879) ##22	INPPL1 (ENSPCTG00005019784)	PHOX2A (ENSPCTG00005019740)	CLPB (ENSPCTG00005019599)	FCHSD2 (ENSPCTG00005019385)	ATG16L2 (ENSPCTG00005019127)	STARD10 (ENSPCTG00005019006)	P2RY6 (ENSPCTG00005018990)	PDE2A (ENSPCTG00005017229)	ENSPCTG00005017089	PLEKHB1 (ENSPCTG00005016848)	RAB6A (ENSPCTG00005016426)	ENSPCTG00005016368	MRPL48 (ENSPCTG00005016115)	COA4 (ENSPCTG00005016081)
Blue whale	MODERN SPECIES	19	NUP98 (ENSBMSG00010020322)	CHRNA10 (ENSBMSG00010020235)	ART1 (ENSBMSG00010020205)	ART5 (ENSBMSG00010020191)	ENSBMSG00010020160	ENSBMSG00010020144	ENSBMSG00010020130	ENSBMSG00010020113	RNF121 (ENSBMSG00010019983)	IL18BP (ENSBMSG00010019943)	NUMA1 (ENSBMSG00010019817)	LRRC51 (ENSBMSG00010019723)	TOMT (ENSBMSG00010019695)	LAMTOR1 (ENSBMSG00010019653)	ENSBMSG00010019619 ##22	FOLR1 (ENSBMSG00010019603) ##22	FOLR2 (ENSBMSG00010019571) ##22	INPPL1 (ENSBMSG00010019507)	PHOX2A (ENSBMSG00010019476)	CLPB (ENSBMSG00010019411)	ENSBMSG00010019360	PDE2A (ENSBMSG00010017836)	ARAP1 (ENSBMSG00010015454)	STARD10 (ENSBMSG00010015245)	ATG16L2 (ENSBMSG00010015158)	FCHSD2 (ENSBMSG00010015023)	P2RY2 (ENSBMSG00010014980)	P2RY6 (ENSBMSG00010014966)	ARHGEF17 (ENSBMSG00010014835)	RELT (ENSBMSG00010014757)	FAM168A (ENSBMSG00010014681)
Camelidae	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.b ##22
Alpaca	MODERN SPECIES	3534																FOLR1 (ENSVPAG00000005386) ##22
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00940000161220	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000167530	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350
Glires	ANCESTRAL SPECIES	1	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00950000186182	ENSGT00940000153798.B	ENSGT00940000160350
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789.t.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Marmotini	ANCESTRAL SPECIES	28	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789.t.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Marmotini_b	ANCESTRAL SPECIES	13	ENSGT00510000047299	ENSGT00550000074799	ENSGT00550000074873.l.a.b	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789.t.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Arctic ground squirrel	MODERN SPECIES	238	PGAP2 (ENSUPAG00010019300)	NUP98 (ENSUPAG00010019310)	ENSUPAG00010019361	CHRNA10 (ENSUPAG00010019373)	ART1 (ENSUPAG00010019379)	ART5 (ENSUPAG00010019384)	ENSUPAG00010019427	ENSUPAG00010019504	RNF121 (ENSUPAG00010019519)	IL18BP (ENSUPAG00010019545)	NUMA1 (ENSUPAG00010019551)	LAMTOR1 (ENSUPAG00010019589)	ENSUPAG00010019609	TOMT (ENSUPAG00010019634)	ANAPC15 (ENSUPAG00010019644)	FOLR1 (ENSUPAG00010019692) ##22	FOLR2 (ENSUPAG00010019707) ##22	INPPL1 (ENSUPAG00010019719)	PHOX2A (ENSUPAG00010019756)	ENSUPAG00010019762	CLPB (ENSUPAG00010019765)	ENSUPAG00010019794	PDE2A (ENSUPAG00010019809)	ARAP1 (ENSUPAG00010019919)	STARD10 (ENSUPAG00010020080)	ATG16L2 (ENSUPAG00010020103)	ENSUPAG00010020122
Squirrel	MODERN SPECIES	98	PGAP2 (ENSSTOG00000000745)	NUP98 (ENSSTOG00000027525)	ENSSTOG00000030092	CHRNA10 (ENSSTOG00000023110)	ART1 (ENSSTOG00000021482)	ART5 (ENSSTOG00000028010)	ENSSTOG00000026237	RNF121 (ENSSTOG00000010800)	IL18BP (ENSSTOG00000033761)	NUMA1 (ENSSTOG00000010821)	ENSSTOG00000030734	ENSSTOG00000023118	LRRC51 (ENSSTOG00000010863)	TOMT (ENSSTOG00000027749)	ANAPC15 (ENSSTOG00000023840)	FOLR1 (ENSSTOG00000010871) ##22	FOLR2 (ENSSTOG00000004760) ##22	INPPL1 (ENSSTOG00000010874)	PHOX2A (ENSSTOG00000021537)	CLPB (ENSSTOG00000004769)	ENSSTOG00000019965	PDE2A (ENSSTOG00000004792)	ARAP1 (ENSSTOG00000014711)	STARD10 (ENSSTOG00000020779)	ATG16L2 (ENSSTOG00000003790)	FCHSD2 (ENSSTOG00000003831)	P2RY2 (ENSSTOG00000029054)	P2RY6 (ENSSTOG00000024044)	ARHGEF17 (ENSSTOG00000014476)	RELT (ENSSTOG00000014491)	FAM168A (ENSSTOG00000014507)
Alpin marmot	MODERN SPECIES	3	ENSMMMG00000012516	PGAP2 (ENSMMMG00000012503)	ENSMMMG00000012497	NUP98 (ENSMMMG00000012428)	CHRNA10 (ENSMMMG00000012422)	ART1 (ENSMMMG00000012409)	ART5 (ENSMMMG00000012335)	ENSMMMG00000012273	RNF121 (ENSMMMG00000012228)	IL18BP (ENSMMMG00000012171)	NUMA1 (ENSMMMG00000012073)	LRRC51 (ENSMMMG00000012002)	ENSMMMG00000011993	TOMT (ENSMMMG00000011977)	ANAPC15 (ENSMMMG00000011899)	FOLR1 (ENSMMMG00000011885) ##22	FOLR2 (ENSMMMG00000011868) ##22	INPPL1 (ENSMMMG00000011850)	ENSMMMG00000011846	CLPB (ENSMMMG00000011769)	ENSMMMG00000011761	ENSMMMG00000011745	PDE2A (ENSMMMG00000011641)	ARAP1 (ENSMMMG00000011395)	STARD10 (ENSMMMG00000011387)	ATG16L2 (ENSMMMG00000011309)	FCHSD2 (ENSMMMG00000011218)	P2RY2 (ENSMMMG00000011203)	P2RY6 (ENSMMMG00000011197)	ARHGEF17 (ENSMMMG00000011108)	RELT (ENSMMMG00000011086)
Eurasian red squirrel	MODERN SPECIES	2	RRM1 (ENSSVLG00005011898)	STIM1 (ENSSVLG00005012021)	RHOG (ENSSVLG00005012192)	PGAP2 (ENSSVLG00005012266)	NUP98 (ENSSVLG00005012518)	ART1 (ENSSVLG00005012997)	ART5 (ENSSVLG00005013095)	ENSSVLG00005013515	RNF121 (ENSSVLG00005013754)	IL18BP (ENSSVLG00005013917)	NUMA1 (ENSSVLG00005014050)	LRRC51 (ENSSVLG00005014225)	LAMTOR1 (ENSSVLG00005014350)	TOMT (ENSSVLG00005014436)	ANAPC15 (ENSSVLG00005014488)	FOLR1 (ENSSVLG00005014547) ##22	FOLR2 (ENSSVLG00005014598) ##22	INPPL1 (ENSSVLG00005014717)	PHOX2A (ENSSVLG00005014822)	CLPB (ENSSVLG00005014931)	ENSSVLG00005015120	ENSSVLG00005015181	PDE2A (ENSSVLG00005015411)	ARAP1 (ENSSVLG00005016156)	STARD10 (ENSSVLG00005016723)	ENSSVLG00005016893	ENSSVLG00005016976	P2RY2 (ENSSVLG00005017053)	P2RY6 (ENSSVLG00005017079)	ARHGEF17 (ENSSVLG00005017138)	RELT (ENSSVLG00005017446)
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.b	ENSGT00950000183144.A.i.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Naked mole-rat female	MODERN SPECIES	24	RHOG (ENSHGLG00000005170)	PGAP2 (ENSHGLG00000010933)	NUP98 (ENSHGLG00000010522)	CHRNA10 (ENSHGLG00000006957)	ENSHGLG00000035168	ENSHGLG00000017966	ENSHGLG00000014873	ENSHGLG00000032622	RNF121 (ENSHGLG00000013885)	IL18BP (ENSHGLG00000018624)	NUMA1 (ENSHGLG00000014134)	Lrrc51 (ENSHGLG00000009288)	LAMTOR1 (ENSHGLG00000007631)	TOMT (ENSHGLG00000037195)	ENSHGLG00000016939	FOLR1 (ENSHGLG00000034542) ##22	INPPL1 (ENSHGLG00000009057)	PHOX2A (ENSHGLG00000039357)	CLPB (ENSHGLG00000015505)	ARAP1 (ENSHGLG00000010532)	STARD10 (ENSHGLG00000008044)	ATG16L2 (ENSHGLG00000007355)	ENSHGLG00000039911	ENSHGLG00000033127	FCHSD2 (ENSHGLG00000006220)	P2RY2 (ENSHGLG00000010376)	P2RY6 (ENSHGLG00000009637)	ARHGEF17 (ENSHGLG00000006914)	RELT (ENSHGLG00000005986)	ENSHGLG00000038465	FAM168A (ENSHGLG00000004069)
Hystricomorpha_a	ANCESTRAL SPECIES	10	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.b	ENSGT00950000183144.A.i.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Guinea pig	MODERN SPECIES	103	STIM1 (ENSCPOG00000013334)	RHOG (ENSCPOG00000021968)	PGAP2 (ENSCPOG00000006513)	NUP98 (ENSCPOG00000006504)	CHRNA10 (ENSCPOG00000027544)	ART1 (ENSCPOG00000036126)	ART5 (ENSCPOG00000000192)	ENSCPOG00000008849	RNF121 (ENSCPOG00000039916)	IL18BP (ENSCPOG00000005646)	NUMA1 (ENSCPOG00000008858)	LRRC51 (ENSCPOG00000005109)	LAMTOR1 (ENSCPOG00000031226)	TOMT (ENSCPOG00000040520)	ANAPC15 (ENSCPOG00000040374)	FOLR1 (ENSCPOG00000012539) ##22	INPPL1 (ENSCPOG00000014786)	PHOX2A (ENSCPOG00000014793)	CLPB (ENSCPOG00000005865)	ENSCPOG00000022639	PDE2A (ENSCPOG00000011286)	ARAP1 (ENSCPOG00000011298)	STARD10 (ENSCPOG00000026959)	ATG16L2 (ENSCPOG00000023584)	FCHSD2 (ENSCPOG00000011328)	P2RY2 (ENSCPOG00000031185)	P2RY6 (ENSCPOG00000036625)	ARHGEF17 (ENSCPOG00000026361)	RELT (ENSCPOG00000024433)	FAM168A (ENSCPOG00000035702)	PLEKHB1 (ENSCPOG00000013730)
Hystricomorpha_b	ANCESTRAL SPECIES	5	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000167530	ENSGT00940000161220	ENSGT00390000000938.b	ENSGT00950000183144.A.i.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Long-tailed chinchilla	MODERN SPECIES	121	RHOG (ENSCLAG00000016136)	PGAP2 (ENSCLAG00000016381)	NUP98 (ENSCLAG00000016425)	CHRNA10 (ENSCLAG00000014704)	ART1 (ENSCLAG00000014117)	ART5 (ENSCLAG00000013938)	ENSCLAG00000017055	ENSCLAG00000016663	RNF121 (ENSCLAG00000017146)	ENSCLAG00000016974	NUMA1 (ENSCLAG00000016726)	LRRC51 (ENSCLAG00000016803)	LAMTOR1 (ENSCLAG00000016024)	ANAPC15 (ENSCLAG00000016375)	TOMT (ENSCLAG00000017135)	FOLR1 (ENSCLAG00000016536) ##22	INPPL1 (ENSCLAG00000014240)	PHOX2A (ENSCLAG00000016051)	CLPB (ENSCLAG00000016849)	ENSCLAG00000014763	PDE2A (ENSCLAG00000013636)	ARAP1 (ENSCLAG00000016265)	STARD10 (ENSCLAG00000014403)	ATG16L2 (ENSCLAG00000016529)	FCHSD2 (ENSCLAG00000015250)	P2RY2 (ENSCLAG00000016377)	P2RY6 (ENSCLAG00000015656)	ARHGEF17 (ENSCLAG00000016790)	RELT (ENSCLAG00000015348)	FAM168A (ENSCLAG00000014406)	PLEKHB1 (ENSCLAG00000016539)
Degu	MODERN SPECIES	187	ENSODEG00000008717	ENSODEG00000008581	NUP98 (ENSODEG00000008778)	CHRNA10 (ENSODEG00000007974)	ART1 (ENSODEG00000009116)	ENSODEG00000008188	ART5 (ENSODEG00000007527)	ENSODEG00000008950	RNF121 (ENSODEG00000009786)	IL18BP (ENSODEG00000010200)	ENSODEG00000007877	Lrrc51 (ENSODEG00000008284)	ENSODEG00000007062	Tomt (ENSODEG00000008354)	ENSODEG00000007214	FOLR1 (ENSODEG00000006777) ##22	ENSODEG00000019600	INPPL1 (ENSODEG00000006960)	PHOX2A (ENSODEG00000006697)	ENSODEG00000007512	CLPB (ENSODEG00000009124)	PDE2A (ENSODEG00000009589)	ENSODEG00000009509	STARD10 (ENSODEG00000006015)	ATG16L2 (ENSODEG00000007030)	ENSODEG00000008989	FCHSD2 (ENSODEG00000006875)	ENSODEG00000019749	P2RY2 (ENSODEG00000007272)	P2RY6 (ENSODEG00000019427)	ARHGEF17 (ENSODEG00000006220)
Rodentia_B	ANCESTRAL SPECIES	33	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Myomorpha	ANCESTRAL SPECIES	13	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Muroidea	ANCESTRAL SPECIES	12	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d.g	ENSGT01030000234601.d.h	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Cricetidae_B	ANCESTRAL SPECIES	26	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT01030000234601.d.g	ENSGT01030000234601.d.h	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Northern American deer mouse	MODERN SPECIES		Rhog (ENSPEMG00000028803)	Pgap2 (ENSPEMG00000015466)	Nup98 (ENSPEMG00000016300)	Chrna10 (ENSPEMG00000017386)	Art1 (ENSPEMG00000016101)	Art5 (ENSPEMG00000017665)	ENSPEMG00000010719	ENSPEMG00000025957	Rnf121 (ENSPEMG00000012343)	Il18bp (ENSPEMG00000014508)	Numa1 (ENSPEMG00000014078)	ENSPEMG00000008657	Lamtor1 (ENSPEMG00000016570)	Tomt (ENSPEMG00000027342)	Anapc15-ps (ENSPEMG00000019092)	Folr1 (ENSPEMG00000014185) ##22	Folr2 (ENSPEMG00000025691) ##22	Inppl1 (ENSPEMG00000001871)	Phox2a (ENSPEMG00000030123)	Clpb (ENSPEMG00000008808)	ENSPEMG00000026828	ENSPEMG00000026615	ENSPEMG00000026968	Dlg2 (ENSPEMG00000000578)	Ccdc90b (ENSPEMG00000024143)	ENSPEMG00000025655	Ankrd42 (ENSPEMG00000007018)	ENSPEMG00000030761	ENSPEMG00000003266	ENSPEMG00000030624	Rab30 (ENSPEMG00000023854)
Cricetinae	ANCESTRAL SPECIES	15	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT01030000234601.d.g	ENSGT01030000234601.d.h	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Chinese hamster chok1gshd	MODERN SPECIES	101	Stim1 (ENSCGRG00001021574)	Rhog (ENSCGRG00001008934)	Pgap2 (ENSCGRG00001021425)	Nup98 (ENSCGRG00001020636)	Chrna10 (ENSCGRG00001010661)	Art1 (ENSCGRG00001002060)	Art5 (ENSCGRG00001020472)	ENSCGRG00001016215	Rnf121 (ENSCGRG00001014503)	Il18bp (ENSCGRG00001013762)	Numa1 (ENSCGRG00001022188)	Lrrc51 (ENSCGRG00001002333)	Lamtor1 (ENSCGRG00001022318)	Tomt (ENSCGRG00001015404)	Anapc15-ps (ENSCGRG00001005734)	Folr1 (ENSCGRG00001016933) ##22	Folr2 (ENSCGRG00001007737) ##22	Inppl1 (ENSCGRG00001008145)	Phox2a (ENSCGRG00001000999)	Clpb (ENSCGRG00001003280)	ENSCGRG00001019437	ENSCGRG00001019112	ENSCGRG00001016840	Pde2a (ENSCGRG00001018176)	Arap1 (ENSCGRG00001017180)	Stard10 (ENSCGRG00001017553)	Atg16l2 (ENSCGRG00001020091)	Fchsd2 (ENSCGRG00001000379)	P2ry2 (ENSCGRG00001001173)	P2ry6 (ENSCGRG00001012749)	Arhgef17 (ENSCGRG00001012651)
Murinae	ANCESTRAL SPECIES		ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Mus	ANCESTRAL SPECIES		ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d.e	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350.a	ENSGT00390000005140.b.a
Mus_B	ANCESTRAL SPECIES		ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789.r.a	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d.e	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350.a	ENSGT00390000005140.b.a
Mouse	MODERN SPECIES	16	Pgap2 (ENSMUSG00000030990)	Nup98 (ENSMUSG00000063550)	Chrna10 (ENSMUSG00000066279)	Art1 (ENSMUSG00000030996)	Art5 (ENSMUSG00000070424)	Trpc2 (ENSMUSG00000100254)	Xntrpc (ENSMUSG00000070425)	Xndc1 (ENSMUSG00000099481)	Rnf121 (ENSMUSG00000070426)	Il18bp (ENSMUSG00000070427)	Numa1 (ENSMUSG00000066306)	Lrrc51 (ENSMUSG00000064307)	Lamtor1 (ENSMUSG00000030842)	Tomt (ENSMUSG00000078630)	Anapc15 (ENSMUSG00000030649)	Folr1 (ENSMUSG00000001827) ##22	Folr2 (ENSMUSG00000032725) ##22	Inppl1 (ENSMUSG00000032737)	Phox2a (ENSMUSG00000007946)	Clpb (ENSMUSG00000001829)	Art2b (ENSMUSG00000030651)	Art2a (ENSMUSG00000092517)	Pde2a (ENSMUSG00000110195)	Gm45837 (ENSMUSG00000030653)	Arap1 (ENSMUSG00000032812)	Stard10 (ENSMUSG00000030688)	Atg16l2 (ENSMUSG00000047767)	Fchsd2 (ENSMUSG00000030691)	P2ry2 (ENSMUSG00000032860)	P2ry6 (ENSMUSG00000048779)	Arhgef17 (ENSMUSG00000032875)
Mus_C	ANCESTRAL SPECIES	13	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789.r.a	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.d.e	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350.a	ENSGT00390000005140.b.a
Steppe mouse	MODERN SPECIES	3349	Rhog (ENSMSIG00000003636)	ENSMSIG00000003418	Nup98 (ENSMSIG00000002896)	Chrna10 (ENSMSIG00000002835)	Art1 (ENSMSIG00000002789)	Art5 (ENSMSIG00000002670)	ENSMSIG00000002300	ENSMSIG00000002248	Rnf121 (ENSMSIG00000002104)	Il18bp (ENSMSIG00000028554)	Numa1 (ENSMSIG00000028506)	Lrrc51 (ENSMSIG00000028501)	Lamtor1 (ENSMSIG00000028492)	Tomt (ENSMSIG00000028487)	Anapc15 (ENSMSIG00000028474)	Folr1 (ENSMSIG00000028445) ##22	ENSMSIG00000028441	Folr2 (ENSMSIG00000028432) ##22	Inppl1 (ENSMSIG00000028415)	Phox2a (ENSMSIG00000028410)	Clpb (ENSMSIG00000028373)	Art2b (ENSMSIG00000028361)	ENSMSIG00000028355	Pde2a (ENSMSIG00000028275)	Arap1 (ENSMSIG00000028221)	Stard10 (ENSMSIG00000028188)	Atg16l2 (ENSMSIG00000028165)	Fchsd2 (ENSMSIG00000028158)	P2ry2 (ENSMSIG00000028156)	P2ry6 (ENSMSIG00000028155)	Arhgef17 (ENSMSIG00000028136)
spretus	MODERN SPECIES	16	Pgap2 (MGP_SPRETEiJ_G0031194)	MGP_SPRETEiJ_G0031193	Chrna10 (MGP_SPRETEiJ_G0031192)	Art1 (MGP_SPRETEiJ_G0031191)	Art5 (MGP_SPRETEiJ_G0031190)	MGP_SPRETEiJ_G0031189	MGP_SPRETEiJ_G0031188	MGP_SPRETEiJ_G0031187	Rnf121 (MGP_SPRETEiJ_G0031186)	Il18bp (MGP_SPRETEiJ_G0031185)	Numa1 (MGP_SPRETEiJ_G0031184)	Lrrc51 (MGP_SPRETEiJ_G0031183)	Lamtor1 (MGP_SPRETEiJ_G0031182)	Tomt (MGP_SPRETEiJ_G0031181)	Anapc15 (MGP_SPRETEiJ_G0031180)	Folr1 (MGP_SPRETEiJ_G0031179) ##22	Folr2 (MGP_SPRETEiJ_G0031178) ##22	Inppl1 (MGP_SPRETEiJ_G0031177)	Phox2a (MGP_SPRETEiJ_G0031176)	Clpb (MGP_SPRETEiJ_G0031175)	MGP_SPRETEiJ_G0031174	MGP_SPRETEiJ_G0031173	Arap1 (MGP_SPRETEiJ_G0031172)	Stard10 (MGP_SPRETEiJ_G0031171)	Atg16l2 (MGP_SPRETEiJ_G0031170)	Fchsd2 (MGP_SPRETEiJ_G0031169)	P2ry2 (MGP_SPRETEiJ_G0031168)	P2ry6 (MGP_SPRETEiJ_G0031167)	Arhgef17 (MGP_SPRETEiJ_G0031166)	Relt (MGP_SPRETEiJ_G0031165)	Fam168a (MGP_SPRETEiJ_G0031164)
Ryukyu mouse	MODERN SPECIES	16	Pgap2 (MGP_CAROLIEiJ_G0030083)	MGP_CAROLIEiJ_G0030082	Chrna10 (MGP_CAROLIEiJ_G0030081)	Art1 (MGP_CAROLIEiJ_G0030080)	MGP_CAROLIEiJ_G0030079	MGP_CAROLIEiJ_G0030078	MGP_CAROLIEiJ_G0030077	MGP_CAROLIEiJ_G0030076	Rnf121 (MGP_CAROLIEiJ_G0030075)	Il18bp (MGP_CAROLIEiJ_G0030074)	Numa1 (MGP_CAROLIEiJ_G0030073)	Lrrc51 (MGP_CAROLIEiJ_G0030072)	Lamtor1 (MGP_CAROLIEiJ_G0030071)	Tomt (MGP_CAROLIEiJ_G0030070)	MGP_CAROLIEiJ_G0030069	Folr1 (MGP_CAROLIEiJ_G0030068) ##22	Folr2 (MGP_CAROLIEiJ_G0030067) ##22	Inppl1 (MGP_CAROLIEiJ_G0030066)	Phox2a (MGP_CAROLIEiJ_G0030065)	Clpb (MGP_CAROLIEiJ_G0030064)	Art2b (MGP_CAROLIEiJ_G0030063)	Pde2a (MGP_CAROLIEiJ_G0030062)	Arap1 (MGP_CAROLIEiJ_G0030061)	Stard10 (MGP_CAROLIEiJ_G0030060)	Atg16l2 (MGP_CAROLIEiJ_G0030059)	Fchsd2 (MGP_CAROLIEiJ_G0030058)	P2ry2 (MGP_CAROLIEiJ_G0030057)	P2ry6 (MGP_CAROLIEiJ_G0030056)	Arhgef17 (MGP_CAROLIEiJ_G0030055)	Relt (MGP_CAROLIEiJ_G0030054)	Fam168a (MGP_CAROLIEiJ_G0030053)
Shrew mouse	MODERN SPECIES		Pgap2 (MGP_PahariEiJ_G0013304)	MGP_PahariEiJ_G0013303	Chrna10 (MGP_PahariEiJ_G0013302)	Art1 (MGP_PahariEiJ_G0013301)	Art5 (MGP_PahariEiJ_G0013300)	MGP_PahariEiJ_G0013299	MGP_PahariEiJ_G0013298	MGP_PahariEiJ_G0013297	Rnf121 (MGP_PahariEiJ_G0013296)	Il18bp (MGP_PahariEiJ_G0013295)	Numa1 (MGP_PahariEiJ_G0013294)	Lrrc51 (MGP_PahariEiJ_G0013293)	Lamtor1 (MGP_PahariEiJ_G0013292)	Tomt (MGP_PahariEiJ_G0013291)	MGP_PahariEiJ_G0013290	Folr1 (MGP_PahariEiJ_G0013289) ##22	Folr2 (MGP_PahariEiJ_G0013288) ##22	Inppl1 (MGP_PahariEiJ_G0013287)	Phox2a (MGP_PahariEiJ_G0013286)	Clpb (MGP_PahariEiJ_G0013285)	Pde2a (MGP_PahariEiJ_G0013284)	Arap1 (MGP_PahariEiJ_G0013283)	Stard10 (MGP_PahariEiJ_G0013282)	Atg16l2 (MGP_PahariEiJ_G0013281)	Fchsd2 (MGP_PahariEiJ_G0013280)	P2ry2 (MGP_PahariEiJ_G0013279)	P2ry6 (MGP_PahariEiJ_G0013278)	Arhgef17 (MGP_PahariEiJ_G0013277)	Relt (MGP_PahariEiJ_G0013276)	Fam168a (MGP_PahariEiJ_G0013275)	Plekhb1 (MGP_PahariEiJ_G0013274)
Rat	MODERN SPECIES		Stim1 (ENSRNOG00000020425)	Rhog (ENSRNOG00000020393)	Pgap2 (ENSRNOG00000020371)	Nup98 (ENSRNOG00000020347)	Chrna10 (ENSRNOG00000020293)	Art1 (ENSRNOG00000020251)	Art5 (ENSRNOG00000020242)	Trpc2 (ENSRNOG00000020188)	Rnf121 (ENSRNOG00000020175)	Il18bp (ENSRNOG00000020150)	Numa1 (ENSRNOG00000000417)	Lrrc51 (ENSRNOG00000020124)	LOC100361543 (ENSRNOG00000020016)	Lrtomt (ENSRNOG00000023434)	Anapc15 (ENSRNOG00000019936)	Folr1 (ENSRNOG00000019902) ##22	Folr2 (ENSRNOG00000019890) ##22	Inppl1 (ENSRNOG00000019730)	Phox2a (ENSRNOG00000019706)	Clpb (ENSRNOG00000019693)	Art2b (ENSRNOG00000019687)	Pde2a (ENSRNOG00000019560)	Arap1 (ENSRNOG00000019555)	Stard10 (ENSRNOG00000019491)	Atg16l2 (ENSRNOG00000019413)	AABR07004891.1 (ENSRNOG00000033196)	Fchsd2 (ENSRNOG00000019319)	P2ry2 (ENSRNOG00000019283)	P2ry6 (ENSRNOG00000019270)	Arhgef17 (ENSRNOG00000053502)	Relt (ENSRNOG00000025075)
Lesser Egyptian jerboa	MODERN SPECIES	43	Rrm1 (ENSJJAG00000016672)	Stim1 (ENSJJAG00000007495)	Rhog (ENSJJAG00000012951)	Pgap2 (ENSJJAG00000017134)	Nup98 (ENSJJAG00000019633)	Chrna10 (ENSJJAG00000016424)	Art1 (ENSJJAG00000014342)	Art5 (ENSJJAG00000023861)	ENSJJAG00000015322	Rnf121 (ENSJJAG00000017900)	Numa1 (ENSJJAG00000019258)	ENSJJAG00000011544	Lrrc51 (ENSJJAG00000011700)	Tomt (ENSJJAG00000001785)	Anapc15-ps (ENSJJAG00000019862)	Folr1 (ENSJJAG00000019600) ##22	Inppl1 (ENSJJAG00000013756)	Phox2a (ENSJJAG00000011355)	Clpb (ENSJJAG00000010825)	Enox1 (ENSJJAG00000022161)	Dnajc15 (ENSJJAG00000003576)	ENSJJAG00000009640	Fam216b (ENSJJAG00000018229)	Tnfsf11 (ENSJJAG00000000831)	Akap11 (ENSJJAG00000005221)	Dgkh (ENSJJAG00000015395)	Vwa8 (ENSJJAG00000021301)	Rgcc (ENSJJAG00000020348)	Mtrf1 (ENSJJAG00000017590)	ENSJJAG00000001187	Wbp4 (ENSJJAG00000014406)
Kangaroo rat	MODERN SPECIES	341	Stim1 (ENSDORG00000012967)	Rhog (ENSDORG00000026853)	Pgap2 (ENSDORG00000015417)	Nup98 (ENSDORG00000015576)	Chrna10 (ENSDORG00000001387)	Art1 (ENSDORG00000001385)	Art5 (ENSDORG00000001382)	ENSDORG00000025634	Rnf121 (ENSDORG00000011927)	Il18bp (ENSDORG00000028634)	Numa1 (ENSDORG00000011931)	Lrrc51 (ENSDORG00000004447)	Lamtor1 (ENSDORG00000025485)	Tomt (ENSDORG00000028464)	Anapc15-ps (ENSDORG00000028333)	Folr1 (ENSDORG00000012556) ##22	Folr2 (ENSDORG00000030135) ##22	Inppl1 (ENSDORG00000011283)	Phox2a (ENSDORG00000011281)	ENSDORG00000000660	Pde2a (ENSDORG00000010009)	Stard10 (ENSDORG00000010017)	Atg16l2 (ENSDORG00000011918)	Fchsd2 (ENSDORG00000011922)	P2ry2 (ENSDORG00000014962)	ENSDORG00000028773	ENSDORG00000024940	P2ry6 (ENSDORG00000024896)	Arhgef17 (ENSDORG00000004680)	Relt (ENSDORG00000011226)	Fam168a (ENSDORG00000024331)
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.a.b ##22
Pika	DUPLICATION
Pika	MODERN SPECIES	5767																ENSOPRG00000008108 ##22
Pika	MODERN SPECIES	8601																ENSOPRG00000007472 ##22
Primates	ANCESTRAL SPECIES		ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Haplorrhini	ANCESTRAL SPECIES		ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000161220	ENSGT00390000000938.p.b	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Simiiformes	ANCESTRAL SPECIES		ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Hominidae	ANCESTRAL SPECIES	1	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00510000047925	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00940000158565	ENSGT00940000153561.b.a.a.b	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00990000205266	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00510000047925	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00390000000417.a.b	ENSGT00390000010152	ENSGT00990000205266	ENSGT00940000160995.b.e.a	ENSGT00390000001538.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Pan	ANCESTRAL SPECIES	1	ENSGT00910000147131	ENSGT00910000144208.g.a	ENSGT00940000163626.f.b	ENSGT00390000009472.b.b	ENSGT00940000160995.b.e.a	ENSGT00390000001538.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.c ##22	ENSGT00950000183144.A.i.a.a.a.a.d ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00910000144184.q.a.h	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Bonobo	MODERN SPECIES	2	DHCR7 (ENSPPAG00000038909)	NADSYN1 (ENSPPAG00000001380)	ENSPPAG00000044001	ENSPPAG00000029134	ENSPPAG00000035835	ENSPPAG00000040916	ENSPPAG00000012937	RNF121 (ENSPPAG00000033091)	IL18BP (ENSPPAG00000037702)	NUMA1 (ENSPPAG00000030445)	LAMTOR1 (ENSPPAG00000040943)	TOMT (ENSPPAG00000031661)	ENSPPAG00000018102	FOLR3 (ENSPPAG00000044084) ##22	ENSPPAG00000044083 ##22	FOLR1 (ENSPPAG00000030512) ##22	FOLR2 (ENSPPAG00000034921) ##22	INPPL1 (ENSPPAG00000044079)	ENSPPAG00000033151	ENSPPAG00000030469	ENSPPAG00000043414	CLPB (ENSPPAG00000016490)	PDE2A (ENSPPAG00000037525)	ARAP1 (ENSPPAG00000037129)	STARD10 (ENSPPAG00000038765)	ATG16L2 (ENSPPAG00000042061)	ENSPPAG00000042264	ENSPPAG00000043302	P2RY2 (ENSPPAG00000025105)	P2RY6 (ENSPPAG00000023392)	ARHGEF17 (ENSPPAG00000032495)
Chimpanzee	MODERN SPECIES	2	ENSPTRG00000007738	ENSPTRG00000049924	ENSPTRG00000050141	ENSPTRG00000028485	DEFB130 (ENSPTRG00000032474)	DEFB131B (ENSPTRG00000050172)	XNDC1N (ENSPTRG00000023860)	RNF121 (ENSPTRG00000004021)	IL18BP (ENSPTRG00000004022)	NUMA1 (ENSPTRG00000004023)	LAMTOR1 (ENSPTRG00000004024)	LRTOMT (ENSPTRG00000004025)	ENSPTRG00000046097	FOLR3 (ENSPTRG00000004027) ##22	ENSPTRG00000045624 ##22	FOLR1 (ENSPTRG00000004029) ##22	FOLR2 (ENSPTRG00000004030) ##22	INPPL1 (ENSPTRG00000004031)	PHOX2A (ENSPTRG00000004032)	ENSPTRG00000043331	ENSPTRG00000045377	CLPB (ENSPTRG00000004035)	PDE2A (ENSPTRG00000004036)	ARAP1 (ENSPTRG00000034443)	STARD10 (ENSPTRG00000004038)	ATG16L2 (ENSPTRG00000004039)	FCHSD2 (ENSPTRG00000004040)	ENSPTRG00000045147	P2RY2 (ENSPTRG00000004042)	P2RY6 (ENSPTRG00000004043)	ARHGEF17 (ENSPTRG00000049905)
Human	MODERN SPECIES	2	KRTAP5-9 (ENSG00000254997)	KRTAP5-10 (ENSG00000204572)	KRTAP5-11 (ENSG00000204571)	DEFB108B (ENSG00000184276)	XNDC1N (ENSG00000254469)	DEFB131B (ENSG00000225805)	RNF121 (ENSG00000137522)	IL18BP (ENSG00000137496)	NUMA1 (ENSG00000137497)	LRTOMT (ENSG00000284922)	LRRC51 (ENSG00000184154)	LAMTOR1 (ENSG00000149357)	TOMT (ENSG00000284844)	ANAPC15 (ENSG00000110200)	FOLR3 (ENSG00000110203) ##22	FOLR1 (ENSG00000110195) ##22	FOLR2 (ENSG00000165457) ##22	INPPL1 (ENSG00000165458)	PHOX2A (ENSG00000165462)	CLPB (ENSG00000162129)	PDE2A (ENSG00000186642)	ARAP1 (ENSG00000186635)	STARD10 (ENSG00000214530)	ATG16L2 (ENSG00000168010)	FCHSD2 (ENSG00000137478)	P2RY2 (ENSG00000175591)	P2RY6 (ENSG00000171631)	ARHGEF17 (ENSG00000110237)	RELT (ENSG00000054967)	FAM168A (ENSG00000054965)	PLEKHB1 (ENSG00000021300)
Gorilla	MODERN SPECIES	2	NADSYN1 (ENSGGOG00000006551)	ENSGGOG00000038292	KRTAP5-10 (ENSGGOG00000016395)	ENSGGOG00000036265	DEFB108B (ENSGGOG00000028100)	DEFB130A (ENSGGOG00000003692)	ENSGGOG00000027132	RNF121 (ENSGGOG00000016954)	IL18BP (ENSGGOG00000016963)	NUMA1 (ENSGGOG00000016968)	TOMT (ENSGGOG00000012492)	LAMTOR1 (ENSGGOG00000012495)	ENSGGOG00000012501	FOLR3 (ENSGGOG00000003944) ##22	ENSGGOG00000038422 ##22	FOLR1 (ENSGGOG00000005569) ##22	FOLR2 (ENSGGOG00000011292) ##22	INPPL1 (ENSGGOG00000011295)	PHOX2A (ENSGGOG00000011309)	ENSGGOG00000022254	CLPB (ENSGGOG00000006057)	PDE2A (ENSGGOG00000014611)	ARAP1 (ENSGGOG00000007805)	STARD10 (ENSGGOG00000012452)	ATG16L2 (ENSGGOG00000003472)	FCHSD2 (ENSGGOG00000034994)	P2RY2 (ENSGGOG00000012903)	P2RY6 (ENSGGOG00000008068)	ARHGEF17 (ENSGGOG00000010255)	RELT (ENSGGOG00000010271)	FAM168A (ENSGGOG00000010281)
Orangutan	MODERN SPECIES	2	RHOG (ENSPPYG00000003629)	PGAP2 (ENSPPYG00000038940)	NUP98 (ENSPPYG00000003631)	CHRNA10 (ENSPPYG00000003632)	ART1 (ENSPPYG00000003633)	ART5 (ENSPPYG00000003634)	XNDC1 (ENSPPYG00000003638)	RNF121 (ENSPPYG00000003640)	IL18BP (ENSPPYG00000003641)	NUMA1 (ENSPPYG00000003642)	LRTOMT (ENSPPYG00000029740)	LAMTOR1 (ENSPPYG00000003645)	ENSPPYG00000003646	FOLR3 (ENSPPYG00000003647) ##22	ENSPPYG00000033361 ##22	FOLR1 (ENSPPYG00000030155) ##22	FOLR2 (ENSPPYG00000003648) ##22	INPPL1 (ENSPPYG00000003649)	PHOX2A (ENSPPYG00000003650)	CLPB (ENSPPYG00000003651)	PDE2A (ENSPPYG00000003652)	ARAP1 (ENSPPYG00000003653)	ENSPPYG00000003654	ATG16L2 (ENSPPYG00000003655)	FCHSD2 (ENSPPYG00000003656)	P2RY2 (ENSPPYG00000003658)	P2RY6 (ENSPPYG00000003659)	ARHGEF17 (ENSPPYG00000029870)	RELT (ENSPPYG00000003660)	FAM168A (ENSPPYG00000003661)	PLEKHB1 (ENSPPYG00000003662)
Gibbon	MODERN SPECIES	5	RHOG (ENSNLEG00000030503)	PGAP2 (ENSNLEG00000032057)	NUP98 (ENSNLEG00000017280)	CHRNA10 (ENSNLEG00000017278)	ART1 (ENSNLEG00000017275)	ART5 (ENSNLEG00000017272)	ENSNLEG00000031989	ENSNLEG00000028363	RNF121 (ENSNLEG00000017264)	IL18BP (ENSNLEG00000017257)	ENSNLEG00000017241	LAMTOR1 (ENSNLEG00000017238)	LRRC51 (ENSNLEG00000030337)	ENSNLEG00000017234	FOLR3 (ENSNLEG00000017224) ##22	FOLR1 (ENSNLEG00000035852) ##22	FOLR2 (ENSNLEG00000027834) ##22	INPPL1 (ENSNLEG00000017207)	ENSNLEG00000034398	ENSNLEG00000033376	ENSNLEG00000017196	PDE2A (ENSNLEG00000017175)	ARAP1 (ENSNLEG00000032891)	STARD10 (ENSNLEG00000017168)	ATG16L2 (ENSNLEG00000017146)	FCHSD2 (ENSNLEG00000017136)	P2RY2 (ENSNLEG00000017134)	P2RY6 (ENSNLEG00000028391)	ARHGEF17 (ENSNLEG00000017127)	RELT (ENSNLEG00000017122)	FAM168A (ENSNLEG00000032977)
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Vervet Monkey	MODERN SPECIES		PGAP2 (ENSCSAG00000004242)	NUP98 (ENSCSAG00000004237)	CHRNA10 (ENSCSAG00000004227)	ART1 (ENSCSAG00000004220)	ART5 (ENSCSAG00000004213)	ENSCSAG00000004211	RNF121 (ENSCSAG00000004206)	IL18BP (ENSCSAG00000004202)	NUMA1 (ENSCSAG00000004200)	LRRC51 (ENSCSAG00000004193)	LAMTOR1 (ENSCSAG00000004190)	TOMT (ENSCSAG00000004187)	ANAPC15 (ENSCSAG00000004184)	ENSCSAG00000004181 ##22	ENSCSAG00000004178 ##22	FOLR1 (ENSCSAG00000004176) ##22	ENSCSAG00000000627	FOLR2 (ENSCSAG00000004161) ##22	INPPL1 (ENSCSAG00000004156)	PHOX2A (ENSCSAG00000004141)	CLPB (ENSCSAG00000004140)	ENSCSAG00000000626	PDE2A (ENSCSAG00000004136)	ARAP1 (ENSCSAG00000004127)	STARD10 (ENSCSAG00000004111)	ATG16L2 (ENSCSAG00000004094)	FCHSD2 (ENSCSAG00000004080)	P2RY2 (ENSCSAG00000000625)	P2RY6 (ENSCSAG00000000624)	ARHGEF17 (ENSCSAG00000004075)	RELT (ENSCSAG00000004070)
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Cercopithecinae_b	ANCESTRAL SPECIES	32	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b.h	ENSGT00390000013075.a.d	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00950000183087.A.a.b.b.g.e.b.b.a.b	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B
Cercopithecinae_d	ANCESTRAL SPECIES	27	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b.h	ENSGT00390000013075.a.d	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00950000183144.A.i.a.a.a.a.d.a ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00940000155980.C.d	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00950000183087.A.a.b.b.g.e.b.b.a.b	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350
Sooty mangabey	MODERN SPECIES	545	ENSCATG00000014698	PGAP2 (ENSCATG00000034622)	NUP98 (ENSCATG00000033581)	CHRNA10 (ENSCATG00000038975)	ART1 (ENSCATG00000020846)	ART5 (ENSCATG00000044955)	ENSCATG00000043589	ENSCATG00000043505	RNF121 (ENSCATG00000039465)	IL18BP (ENSCATG00000036233)	NUMA1 (ENSCATG00000044445)	LAMTOR1 (ENSCATG00000045256)	TOMT (ENSCATG00000043251)	ANAPC15 (ENSCATG00000043590)	ENSCATG00000037183	FOLR1 (ENSCATG00000045296) ##22	FOLR2 (ENSCATG00000029421) ##22	INPPL1 (ENSCATG00000038751)	PHOX2A (ENSCATG00000043898)	CLPB (ENSCATG00000044266)	PDE2A (ENSCATG00000042056)	ARAP1 (ENSCATG00000030588)	STARD10 (ENSCATG00000039309)	ATG16L2 (ENSCATG00000042490)	ENSCATG00000014513	FCHSD2 (ENSCATG00000045137)	P2RY2 (ENSCATG00000013549)	P2RY6 (ENSCATG00000010832)	ARHGEF17 (ENSCATG00000031638)	RELT (ENSCATG00000039204)	FAM168A (ENSCATG00000039849)
Drill	MODERN SPECIES	1114	PGAP2 (ENSMLEG00000038507)	NUP98 (ENSMLEG00000043563)	CHRNA10 (ENSMLEG00000019278)	ART1 (ENSMLEG00000030716)	ART5 (ENSMLEG00000008190)	ENSMLEG00000034998	ENSMLEG00000039461	RNF121 (ENSMLEG00000043299)	IL18BP (ENSMLEG00000032241)	NUMA1 (ENSMLEG00000029680)	LAMTOR1 (ENSMLEG00000037079)	TOMT (ENSMLEG00000037107)	ANAPC15 (ENSMLEG00000044094)	ENSMLEG00000037090 ##22	ENSMLEG00000042450 ##22	FOLR1 (ENSMLEG00000030123) ##22	FOLR2 (ENSMLEG00000017682) ##22	INPPL1 (ENSMLEG00000007523)	PHOX2A (ENSMLEG00000028217)	ENSMLEG00000028161	ENSMLEG00000030118	CLPB (ENSMLEG00000015735)	PDE2A (ENSMLEG00000042765)	ARAP1 (ENSMLEG00000028377)	STARD10 (ENSMLEG00000018192)	ATG16L2 (ENSMLEG00000035462)	FCHSD2 (ENSMLEG00000038604)
Olive baboon	MODERN SPECIES	3	PGAP2 (ENSPANG00000024371)	ENSPANG00000020108	NUP98 (ENSPANG00000004511)	CHRNA10 (ENSPANG00000007812)	ART1 (ENSPANG00000014357)	ART5 (ENSPANG00000006480)	ENSPANG00000035297	ENSPANG00000046603	ENSPANG00000005374	ENSPANG00000017476	ENSPANG00000025408	LAMTOR1 (ENSPANG00000021812)	LRTOMT (ENSPANG00000002496)	ENSPANG00000035397	ENSPANG00000016288 ##22	FOLR1 (ENSPANG00000017795) ##22	FOLR2 (ENSPANG00000050381) ##22	INPPL1 (ENSPANG00000002495)	PHOX2A (ENSPANG00000016550)	CLPB (ENSPANG00000007467)	PDE2A (ENSPANG00000015383)	ARAP1 (ENSPANG00000007955)	STARD10 (ENSPANG00000010680)	ATG16L2 (ENSPANG00000008372)	ENSPANG00000040580	ENSPANG00000039173	FCHSD2 (ENSPANG00000001966)	P2RY2 (ENSPANG00000008844)	P2RY6 (ENSPANG00000017366)	ARHGEF17 (ENSPANG00000000122)	RELT (ENSPANG00000000123)
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000155158.i	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00390000016789	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Pig-tailed macaque	MODERN SPECIES	423	PGAP2 (ENSMNEG00000004471)	NUP98 (ENSMNEG00000029671)	CHRNA10 (ENSMNEG00000028568)	ART1 (ENSMNEG00000035928)	ART5 (ENSMNEG00000036474)	ENSMNEG00000040075	ENSMNEG00000043225	RNF121 (ENSMNEG00000008640)	IL18BP (ENSMNEG00000036751)	NUMA1 (ENSMNEG00000014073)	TOMT (ENSMNEG00000029982)	LAMTOR1 (ENSMNEG00000032598)	ANAPC15 (ENSMNEG00000038267)	FOLR2 (ENSMNEG00000012370) ##22	ENSMNEG00000038951	FOLR1 (ENSMNEG00000028943) ##22	INPPL1 (ENSMNEG00000031772)	PHOX2A (ENSMNEG00000036777)	CLPB (ENSMNEG00000032568)	PDE2A (ENSMNEG00000016355)	ARAP1 (ENSMNEG00000040367)	STARD10 (ENSMNEG00000036590)	ATG16L2 (ENSMNEG00000036070)	FCHSD2 (ENSMNEG00000034851)	P2RY2 (ENSMNEG00000020248)	P2RY6 (ENSMNEG00000022365)	ARHGEF17 (ENSMNEG00000037963)	RELT (ENSMNEG00000040208)	FAM168A (ENSMNEG00000022700)	PLEKHB1 (ENSMNEG00000040021)	RAB6A (ENSMNEG00000029216)
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000155158.i	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01100000263493.a.a.a.b.a.a.b.b.a.a.a.a.a.a.b.a.b	ENSGT01030000234601.c.b.b	ENSGT00390000004140.b	ENSGT00940000166898.a.a.b.b.a.a.a.a.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00390000016789	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT01100000263493.a.b.a.b.a.a.b.a.b.b.b.a.b.b.a.a.a.a.b.b.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT01030000237705	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Crab-eating macaque	MODERN SPECIES	5	PGAP2 (ENSMFAG00000036676)	NUP98 (ENSMFAG00000045069)	ENSMFAG00000048588	ART1 (ENSMFAG00000003890)	ENSMFAG00000062116	ART5 (ENSMFAG00000038891)	ENSMFAG00000049163	ENSMFAG00000059552	RNF121 (ENSMFAG00000043086)	ENSMFAG00000007235	NUMA1 (ENSMFAG00000042621)	TOMT (ENSMFAG00000046386)	LAMTOR1 (ENSMFAG00000040752)	FOLR2 (ENSMFAG00000002506) ##22	ENSMFAG00000043902 ##22	FOLR1 (ENSMFAG00000030646) ##22	INPPL1 (ENSMFAG00000037937)	ENSMFAG00000048036	CLPB (ENSMFAG00000039603)	PDE2A (ENSMFAG00000044960)	ARAP1 (ENSMFAG00000039424)	STARD10 (ENSMFAG00000018716)	ENSMFAG00000050335	ENSMFAG00000041534	FCHSD2 (ENSMFAG00000004075)	ENSMFAG00000052451	ENSMFAG00000026637	ENSMFAG00000059191	P2RY6 (ENSMFAG00000028522)	ENSMFAG00000036527	ENSMFAG00000053348
Rhesus	MODERN SPECIES	5	RHOG (ENSMMUG00000003957)	PGAP2 (ENSMMUG00000003955)	NUP98 (ENSMMUG00000003950)	CHRNA10 (ENSMMUG00000003949)	ART1 (ENSMMUG00000003948)	ENSMMUG00000060447	ART5 (ENSMMUG00000003946)	XNDC1 (ENSMMUG00000007325)	ENSMMUG00000059115	RNF121 (ENSMMUG00000007326)	IL18BP (ENSMMUG00000007340)	NUMA1 (ENSMMUG00000007330)	LRTOMT (ENSMMUG00000021280)	LAMTOR1 (ENSMMUG00000021282)	FOLR2 (ENSMMUG00000010453) ##22	FOLR1 (ENSMMUG00000010455) ##22	INPPL1 (ENSMMUG00000010451)	PHOX2A (ENSMMUG00000060629)	ENSMMUG00000056905	ENSMMUG00000061215	CLPB (ENSMMUG00000005423)	ARAP1 (ENSMMUG00000015054)	STARD10 (ENSMMUG00000039301)	ATG16L2 (ENSMMUG00000001293)	FCHSD2 (ENSMMUG00000001294)	P2RY2 (ENSMMUG00000019186)	P2RY6 (ENSMMUG00000003138)	ARHGEF17 (ENSMMUG00000003139)	RELT (ENSMMUG00000003140)	FAM168A (ENSMMUG00000003142)	PLEKHB1 (ENSMMUG00000004791)
Rhinopithecus	ANCESTRAL SPECIES	21	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a.d.b ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00950000183152.B.c.a.fe.a	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Black snub-nosed monkey	MODERN SPECIES	1182	ENSRBIG00000029882	NUP98 (ENSRBIG00000042244)	CHRNA10 (ENSRBIG00000009540)	ART1 (ENSRBIG00000032899)	ART5 (ENSRBIG00000031267)	ENSRBIG00000044109	ENSRBIG00000000062	RNF121 (ENSRBIG00000038083)	IL18BP (ENSRBIG00000037256)	NUMA1 (ENSRBIG00000034317)	LAMTOR1 (ENSRBIG00000028888)	ENSRBIG00000033808	TOMT (ENSRBIG00000037486)	ENSRBIG00000040696	ENSRBIG00000039297 ##22	FOLR1 (ENSRBIG00000040144) ##22	FOLR2 (ENSRBIG00000029344) ##22	INPPL1 (ENSRBIG00000040337)	PHOX2A (ENSRBIG00000036312)	ENSRBIG00000038945	CLPB (ENSRBIG00000027633)	PDE2A (ENSRBIG00000010840)	ARAP1 (ENSRBIG00000016228)	STARD10 (ENSRBIG00000031300)	ATG16L2 (ENSRBIG00000033050)	FCHSD2 (ENSRBIG00000034018)	P2RY6 (ENSRBIG00000001344)	ARHGEF17 (ENSRBIG00000028737)	RELT (ENSRBIG00000019893)	FAM168A (ENSRBIG00000031689)	ENSRBIG00000044591
Golden snub-nosed monkey	MODERN SPECIES	1304	ENSRROG00000012834	NUP98 (ENSRROG00000031812)	CHRNA10 (ENSRROG00000043364)	ART1 (ENSRROG00000044951)	ART5 (ENSRROG00000039668)	ENSRROG00000043049	ENSRROG00000032358	RNF121 (ENSRROG00000002251)	IL18BP (ENSRROG00000036271)	NUMA1 (ENSRROG00000031539)	LAMTOR1 (ENSRROG00000043908)	TOMT (ENSRROG00000039719)	ENSRROG00000032455	ENSRROG00000014196	ENSRROG00000003896 ##22	FOLR1 (ENSRROG00000042045) ##22	FOLR2 (ENSRROG00000044789) ##22	INPPL1 (ENSRROG00000030610)	PHOX2A (ENSRROG00000026638)	ENSRROG00000036788	CLPB (ENSRROG00000041613)	PDE2A (ENSRROG00000042016)	ARAP1 (ENSRROG00000029375)	STARD10 (ENSRROG00000024050)	ATG16L2 (ENSRROG00000024129)	FCHSD2 (ENSRROG00000041973)	P2RY2 (ENSRROG00000025105)	P2RY6 (ENSRROG00000002754)	ARHGEF17 (ENSRROG00000041198)	RELT (ENSRROG00000042366)	ENSRROG00000034790
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00510000047925	ENSGT00390000016789	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000154879.ib	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Cebidae	ANCESTRAL SPECIES		ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000154879.ib	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Marmoset	MODERN SPECIES	2	TRIM21 (ENSCJAG00000015591)	RRM1 (ENSCJAG00000015495)	RHOG (ENSCJAG00000048517)	ENSCJAG00000015470	ENSCJAG00000015332	CHRNA10 (ENSCJAG00000015465)	ART1 (ENSCJAG00000015457)	ENSCJAG00000032556	ENSCJAG00000071881	IL18BP (ENSCJAG00000015324)	NUMA1 (ENSCJAG00000015253)	LRTOMT (ENSCJAG00000046450)	ANAPC15 (ENSCJAG00000069144)	ENSCJAG00000074280 ##22	ENSCJAG00000015239 ##22	FOLR1 (ENSCJAG00000015224) ##22	FOLR2 (ENSCJAG00000015212) ##22	INPPL1 (ENSCJAG00000015191)	PHOX2A (ENSCJAG00000015188)	CLPB (ENSCJAG00000015121)	ENSCJAG00000085949	PDE2A (ENSCJAG00000015101)	ARAP1 (ENSCJAG00000015038)	ENSCJAG00000074795	STARD10 (ENSCJAG00000043524)	ATG16L2 (ENSCJAG00000014994)	FCHSD2 (ENSCJAG00000014990)	ENSCJAG00000084151	P2RY6 (ENSCJAG00000022091)	ARHGEF17 (ENSCJAG00000015946)	RELT (ENSCJAG00000015934)
Cebidae_a	ANCESTRAL SPECIES	10	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938.q	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00910000147234	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT00940000154879.ib	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a
Bolivian squirrel monkey	MODERN SPECIES	50	ENSSBOG00000017856	CHRNA10 (ENSSBOG00000013019)	ART1 (ENSSBOG00000035768)	ART5 (ENSSBOG00000019182)	ENSSBOG00000028191	ENSSBOG00000011177	RNF121 (ENSSBOG00000029753)	ENSSBOG00000027382	IL18BP (ENSSBOG00000033231)	NUMA1 (ENSSBOG00000032575)	ENSSBOG00000032090	TOMT (ENSSBOG00000033709)	ENSSBOG00000035680	FOLR2 (ENSSBOG00000030720) ##22	ENSSBOG00000027615 ##22	FOLR1 (ENSSBOG00000032792) ##22	INPPL1 (ENSSBOG00000028042)	PHOX2A (ENSSBOG00000019317)	CLPB (ENSSBOG00000031007)	PDE2A (ENSSBOG00000035008)	ARAP1 (ENSSBOG00000031716)	STARD10 (ENSSBOG00000022143)	ATG16L2 (ENSSBOG00000027588)	FCHSD2 (ENSSBOG00000018307)	ENSSBOG00000023173	ENSSBOG00000027673	ENSSBOG00000027043	P2RY2 (ENSSBOG00000010684)	ARHGEF17 (ENSSBOG00000024564)	RELT (ENSSBOG00000027236)	FAM168A (ENSSBOG00000005248)
Capuchin	DUPLICATION
Capuchin	MODERN SPECIES	79	NUP98 (ENSCCAG00000022009)	CHRNA10 (ENSCCAG00000024887)	ART1 (ENSCCAG00000037398)	ART5 (ENSCCAG00000036098)	ENSCCAG00000025594	RNF121 (ENSCCAG00000027188)	IL18BP (ENSCCAG00000029744)	NUMA1 (ENSCCAG00000036774)	LRRC51 (ENSCCAG00000027389)	LAMTOR1 (ENSCCAG00000031446)	TOMT (ENSCCAG00000034068)	ENSCCAG00000000895	ENSCCAG00000026504	ENSCCAG00000033272 ##22	ENSCCAG00000026662	ENSCCAG00000032275 ##22	FOLR2 (ENSCCAG00000032155) ##22	INPPL1 (ENSCCAG00000024212)	PHOX2A (ENSCCAG00000028435)	CLPB (ENSCCAG00000032490)	PDE2A (ENSCCAG00000020637)	ARAP1 (ENSCCAG00000034708)	STARD10 (ENSCCAG00000027567)	ATG16L2 (ENSCCAG00000036440)	FCHSD2 (ENSCCAG00000024519)	ENSCCAG00000034490	P2RY2 (ENSCCAG00000020034)	P2RY6 (ENSCCAG00000019886)	ARHGEF17 (ENSCCAG00000029348)	RELT (ENSCCAG00000034344)	FAM168A (ENSCCAG00000021168)
Capuchin	MODERN SPECIES	8	ENSCCAG00000019331	ALDH2 (ENSCCAG00000033005)	ACAD10 (ENSCCAG00000027525)	BRAP (ENSCCAG00000035296)	ATXN2 (ENSCCAG00000026267)	SH2B3 (ENSCCAG00000028333)	PHETA1 (ENSCCAG00000024913)	CUX2 (ENSCCAG00000020003)	MYL2 (ENSCCAG00000022041)	CCDC63 (ENSCCAG00000021976)	ENSCCAG00000018829	HVCN1 (ENSCCAG00000018134)	ENSCCAG00000032348	PPTC7 (ENSCCAG00000030882)	RAD9B (ENSCCAG00000036273)	ENSCCAG00000025400 ##22	VPS29 (ENSCCAG00000021777)	ENSCCAG00000037803	GPN3 (ENSCCAG00000020449)	ENSCCAG00000027141	ANAPC7 (ENSCCAG00000028880)	ATP2A2 (ENSCCAG00000034051)	IFT81 (ENSCCAG00000028684)	ENSCCAG00000007333	ANKRD13A (ENSCCAG00000037958)	GIT2 (ENSCCAG00000021510)	TCHP (ENSCCAG00000027565)	GLTP (ENSCCAG00000032136)	TRPV4 (ENSCCAG00000025742)	FAM222A (ENSCCAG00000030874)	MVK (ENSCCAG00000019252)
Mas night monkey	MODERN SPECIES	830	ENSANAG00000037001	NUP98 (ENSANAG00000020861)	ENSANAG00000030802	CHRNA10 (ENSANAG00000038522)	ART1 (ENSANAG00000025055)	ART5 (ENSANAG00000025964)	TRPC2 (ENSANAG00000028976)	ENSANAG00000022344	RNF121 (ENSANAG00000037407)	IL18BP (ENSANAG00000020709)	NUMA1 (ENSANAG00000038526)	LAMTOR1 (ENSANAG00000037872)	TOMT (ENSANAG00000032602)	ENSANAG00000028571	FOLR3 (ENSANAG00000023349) ##22	FOLR1 (ENSANAG00000036278) ##22	FOLR2 (ENSANAG00000026670) ##22	INPPL1 (ENSANAG00000027766)	PHOX2A (ENSANAG00000023728)	CLPB (ENSANAG00000032809)	PDE2A (ENSANAG00000032518)	ARAP1 (ENSANAG00000038203)	STARD10 (ENSANAG00000021823)	ATG16L2 (ENSANAG00000001465)	ENSANAG00000038483	FCHSD2 (ENSANAG00000027876)	P2RY2 (ENSANAG00000004407)	P2RY6 (ENSANAG00000012418)	ARHGEF17 (ENSANAG00000033936)	RELT (ENSANAG00000019742)	FAM168A (ENSANAG00000027985)
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	1460																FOLR1 (ENSTSYG00000003503) ##22
Tarsier	MODERN SPECIES	5408																ENSTSYG00000036436 ##22
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.o ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Bushbaby	MODERN SPECIES	116	ENSOGAG00000032480	STIM1 (ENSOGAG00000011877)	RHOG (ENSOGAG00000030422)	PGAP2 (ENSOGAG00000013298)	NUP98 (ENSOGAG00000034549)	CHRNA10 (ENSOGAG00000007040)	ART1 (ENSOGAG00000032956)	ART5 (ENSOGAG00000014785)	ENSOGAG00000027009	RNF121 (ENSOGAG00000000958)	NUMA1 (ENSOGAG00000000960)	LRRC51 (ENSOGAG00000001364)	LAMTOR1 (ENSOGAG00000031156)	TOMT (ENSOGAG00000025408)	ANAPC15 (ENSOGAG00000027496)	FOLR1 (ENSOGAG00000000641) ##22	FOLR2 (ENSOGAG00000031929) ##22	INPPL1 (ENSOGAG00000012996)	PHOX2A (ENSOGAG00000026307)	CLPB (ENSOGAG00000015338)	PDE2A (ENSOGAG00000006218)	ARAP1 (ENSOGAG00000011984)	STARD10 (ENSOGAG00000029093)	ATG16L2 (ENSOGAG00000012494)	FCHSD2 (ENSOGAG00000011995)	P2RY2 (ENSOGAG00000000742)	P2RY6 (ENSOGAG00000000743)	ARHGEF17 (ENSOGAG00000000744)	RELT (ENSOGAG00000000748)	FAM168A (ENSOGAG00000000749)	ENSOGAG00000033848
Lemuriformes	ANCESTRAL SPECIES	13	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.o ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Mouse lemur	MODERN SPECIES	27	RHOG (ENSMICG00000044004)	PGAP2 (ENSMICG00000003239)	NUP98 (ENSMICG00000003216)	CHRNA10 (ENSMICG00000048048)	ART1 (ENSMICG00000028693)	ART5 (ENSMICG00000014815)	TRPC2 (ENSMICG00000030772)	ENSMICG00000014788	RNF121 (ENSMICG00000014792)	IL18BP (ENSMICG00000014827)	NUMA1 (ENSMICG00000014831)	TOMT (ENSMICG00000010445)	LAMTOR1 (ENSMICG00000010450)	ENSMICG00000029423	ENSMICG00000013939 ##22	FOLR1 (ENSMICG00000030044) ##22	FOLR2 (ENSMICG00000037402) ##22	INPPL1 (ENSMICG00000011696)	PHOX2A (ENSMICG00000004256)	CLPB (ENSMICG00000011735)	PDE2A (ENSMICG00000012366)	ARAP1 (ENSMICG00000012392)	STARD10 (ENSMICG00000029572)	ATG16L2 (ENSMICG00000012424)	FCHSD2 (ENSMICG00000012437)	ENSMICG00000029704	ARHGEF17 (ENSMICG00000016715)	RELT (ENSMICG00000016731)	FAM168A (ENSMICG00000043205)	ENSMICG00000031782	PLEKHB1 (ENSMICG00000003147)
Lemuriformes_a	ANCESTRAL SPECIES	50	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00940000161220	ENSGT00390000016789	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.a.a ##22	ENSGT00950000183144.A.i.a.b ##22	ENSGT00950000183144.A.i.a.a.a.b.o ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Coquerels sifaka	MODERN SPECIES	338	RHOG (ENSPCOG00000010178)	PGAP2 (ENSPCOG00000023518)	NUP98 (ENSPCOG00000020820)	CHRNA10 (ENSPCOG00000000604)	ART1 (ENSPCOG00000023847)	ART5 (ENSPCOG00000019894)	ENSPCOG00000008155	ENSPCOG00000018031	RNF121 (ENSPCOG00000028445)	IL18BP (ENSPCOG00000022571)	NUMA1 (ENSPCOG00000028849)	LAMTOR1 (ENSPCOG00000019358)	TOMT (ENSPCOG00000021317)	ANAPC15 (ENSPCOG00000022372)	FOLR3 (ENSPCOG00000015335) ##22	FOLR1 (ENSPCOG00000024246) ##22	FOLR2 (ENSPCOG00000026871) ##22	INPPL1 (ENSPCOG00000017270)	PHOX2A (ENSPCOG00000013897)	CLPB (ENSPCOG00000025816)	PDE2A (ENSPCOG00000025497)	ARAP1 (ENSPCOG00000023351)	STARD10 (ENSPCOG00000019255)	ATG16L2 (ENSPCOG00000024003)	FCHSD2 (ENSPCOG00000011232)	ARHGEF17 (ENSPCOG00000025949)	RELT (ENSPCOG00000014211)	FAM168A (ENSPCOG00000020680)	PLEKHB1 (ENSPCOG00000019823)	RAB6A (ENSPCOG00000021991)	ENSPCOG00000025047
Greater bamboo lemur	MODERN SPECIES	254	RHOG (ENSPSMG00000013826)	PGAP2 (ENSPSMG00000013810)	ENSPSMG00000013767	NUP98 (ENSPSMG00000013580)	CHRNA10 (ENSPSMG00000013408)	ART1 (ENSPSMG00000013396)	ART5 (ENSPSMG00000013386)	ENSPSMG00000013373	ENSPSMG00000013357	RNF121 (ENSPSMG00000013330)	IL18BP (ENSPSMG00000013284)	NUMA1 (ENSPSMG00000012829)	LAMTOR1 (ENSPSMG00000012519)	TOMT (ENSPSMG00000012468)	ANAPC15 (ENSPSMG00000012383)	FOLR1 (ENSPSMG00000012351) ##22	FOLR2 (ENSPSMG00000012333) ##22	INPPL1 (ENSPSMG00000012299)	PHOX2A (ENSPSMG00000012271)	CLPB (ENSPSMG00000012111)	ENSPSMG00000011792	PDE2A (ENSPSMG00000011524)	ARAP1 (ENSPSMG00000010436)	STARD10 (ENSPSMG00000009819)	ATG16L2 (ENSPSMG00000009784)	FCHSD2 (ENSPSMG00000009609)	P2RY2 (ENSPSMG00000009468)	P2RY6 (ENSPSMG00000009466)	ARHGEF17 (ENSPSMG00000009449)	RELT (ENSPSMG00000009387)	ENSPSMG00000009349
Eutheria	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.b ##22
Boreoeutheria	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.b ##22
Laurasiatheria	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.b ##22
Laurasiatheria_a	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.b ##22
Artiodactyla	ANCESTRAL SPECIES																	ENSGT00950000183144.A.i.b ##22
Suina	ANCESTRAL SPECIES	5	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i.a.a.b ##22	ENSGT00950000183144.A.i.b ##22	ENSGT00950000183144.A.i.a.a.a.b ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00940000153936.b	ENSGT00510000046732.A	ENSGT01030000234621.C.a.a.b	ENSGT01030000234621.C.a.b	ENSGT00940000153798.B	ENSGT00940000160350	ENSGT00390000005140.b.a	ENSGT00390000013989.b
Pig	MODERN SPECIES	17	ART1 (ENSSSCG00000038255)	ART5 (ENSSSCG00000062852)	ENSSSCG00000014799	ENSSSCG00000048448	ENSSSCG00000048507	RNF121 (ENSSSCG00000023796)	ENSSSCG00000014800	NUMA1 (ENSSSCG00000014802)	LRRC51 (ENSSSCG00000014803)	LAMTOR1 (ENSSSCG00000014804)	TOMT (ENSSSCG00000014805)	ANAPC15 (ENSSSCG00000014806)	ENSSSCG00000061202	ENSSSCG00000036853	ENSSSCG00000022236 ##22	ENSSSCG00000053501 ##22	FOLR2 (ENSSSCG00000014812) ##22	INPPL1 (ENSSSCG00000014811)	PHOX2A (ENSSSCG00000014813)	CLPB (ENSSSCG00000036887)	PDE2A (ENSSSCG00000029388)	ARAP1 (ENSSSCG00000014817)	STARD10 (ENSSSCG00000014818)	ATG16L2 (ENSSSCG00000014819)	FCHSD2 (ENSSSCG00000014820)	P2RY2 (ENSSSCG00000040207)	P2RY6 (ENSSSCG00000014823)	ENSSSCG00000014822	RELT (ENSSSCG00000014825)	FAM168A (ENSSSCG00000039996)	ENSSSCG00000044826
Chacoan peccary	MODERN SPECIES	32	NUP98 (ENSCWAG00000000443)	CHRNA10 (ENSCWAG00000000400)	ART1 (ENSCWAG00000000381)	ART5 (ENSCWAG00000000367)	ENSCWAG00000000298	ENSCWAG00000000261	ENSCWAG00000000254	RNF121 (ENSCWAG00000000171)	ENSCWAG00000000114	NUMA1 (ENSCWAG00000000058)	LRRC51 (ENSCWAG00000000017)	LAMTOR1 (ENSCWAG00000006187)	TOMT (ENSCWAG00000006156)	ANAPC15 (ENSCWAG00000006136)	ENSCWAG00000006114 ##22	ENSCWAG00000006091 ##22	FOLR2 (ENSCWAG00000006053) ##22	INPPL1 (ENSCWAG00000005975)	PHOX2A (ENSCWAG00000005947)	CLPB (ENSCWAG00000005766)	PDE2A (ENSCWAG00000004293)	ARAP1 (ENSCWAG00000003270)	STARD10 (ENSCWAG00000003131)	ATG16L2 (ENSCWAG00000003106)	FCHSD2 (ENSCWAG00000003033)	P2RY2 (ENSCWAG00000003004)	P2RY6 (ENSCWAG00000002997)	ARHGEF17 (ENSCWAG00000002950)	RELT (ENSCWAG00000002926)	FAM168A (ENSCWAG00000002905)	PLEKHB1 (ENSCWAG00000002733)
Marsupialia	ANCESTRAL SPECIES	34	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b.c	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.c.b.b.d	ENSGT01030000234601.d.n	ENSGT01030000234601.d.m
Opossum	MODERN SPECIES	3	RHOG (ENSMODG00000024005)	PGAP2 (ENSMODG00000008322)	NUP98 (ENSMODG00000008290)	CHRNA10 (ENSMODG00000008246)	ART1 (ENSMODG00000008234)	ENSMODG00000008226	ENSMODG00000008210	ENSMODG00000043809	ENSMODG00000050450	ENSMODG00000008145	ENSMODG00000045146	NUMA1 (ENSMODG00000008131)	LAMTOR1 (ENSMODG00000008074)	TOMT (ENSMODG00000008087)	ANAPC15 (ENSMODG00000008052)	ENSMODG00000008032 ##22	INPPL1 (ENSMODG00000008002)	PHOX2A (ENSMODG00000007882)	CLPB (ENSMODG00000007937)	ENSMODG00000049232	ENSMODG00000044446	ENSMODG00000027983	ENSMODG00000007901	ENSMODG00000045501	ENSMODG00000043544	PDE2A (ENSMODG00000007870)	ARAP1 (ENSMODG00000007803)	STARD10 (ENSMODG00000007754)	ENSMODG00000007739	FCHSD2 (ENSMODG00000007713)	P2RY2 (ENSMODG00000007664)
Marsupialia_b	ANCESTRAL SPECIES	20	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b.c	ENSGT01060000248588.b.d	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.c.b.b.d	ENSGT01030000234601.d.n	ENSGT01030000234601.d.m	ENSGT00940000157940	ENSGT00390000016881	ENSGT00390000006573	ENSGT00940000153481.C	ENSGT00950000183130.B	ENSGT00390000013549.a.a	ENSGT00530000063860.b	ENSGT01060000248594.e.b	ENSGT00390000010391
Diprotodontia	ANCESTRAL SPECIES	24	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b.c	ENSGT01060000248588.b.d	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.c.b.b.d	ENSGT01030000234601.d.n	ENSGT01030000234601.d.m	ENSGT00940000157940	ENSGT00390000016881	ENSGT00390000006573	ENSGT00940000153481.C	ENSGT00950000183130.B	ENSGT00390000013549.a.a	ENSGT00530000063860.b	ENSGT01060000248594.e.b	ENSGT00390000010391
Diprotodontia_a	ANCESTRAL SPECIES	25	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b.c	ENSGT01060000248588.b.d	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00390000004026	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.i ##22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT01030000234601.c.b.b.d	ENSGT01030000234601.d.n	ENSGT01030000234601.d.m	ENSGT00940000153527.d.b.a.b	ENSGT00940000157940	ENSGT00390000016881	ENSGT00390000006573	ENSGT00940000153481.C	ENSGT00950000183130.B	ENSGT00390000013549.a.a	ENSGT00530000063860.b	ENSGT01060000248594.e.b
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1019	PGAP2 (ENSVURG00010022229)	NUP98 (ENSVURG00010022236)	CHRNA10 (ENSVURG00010022242)	ART1 (ENSVURG00010022250)	ENSVURG00010022252	ENSVURG00010022256	ENSVURG00010022281	RNF121 (ENSVURG00010022282)	ENSVURG00010022284	NUMA1 (ENSVURG00010022288)	LRRC51 (ENSVURG00010022301)	ENSVURG00010022305	TOMT (ENSVURG00010022308)	ANAPC15 (ENSVURG00010022314)	ENSVURG00010022322 ##22	ENSVURG00010022383 ##22	INPPL1 (ENSVURG00010022386)	PHOX2A (ENSVURG00010022391)	CLPB (ENSVURG00010022398)	ENSVURG00010022415	ENSVURG00010022417
Common wonbat	MODERN SPECIES	1019	RHOG (ENSVURG00010022226)	PGAP2 (ENSVURG00010022229)	NUP98 (ENSVURG00010022236)	CHRNA10 (ENSVURG00010022242)	ART1 (ENSVURG00010022250)	ENSVURG00010022252	ENSVURG00010022256	ENSVURG00010022281	RNF121 (ENSVURG00010022282)	ENSVURG00010022284	NUMA1 (ENSVURG00010022288)	LRRC51 (ENSVURG00010022301)	ENSVURG00010022305	TOMT (ENSVURG00010022308)	ANAPC15 (ENSVURG00010022314)	ENSVURG00010022322 ##22	ENSVURG00010022383 ##22	INPPL1 (ENSVURG00010022386)	PHOX2A (ENSVURG00010022391)	CLPB (ENSVURG00010022398)	ENSVURG00010022415	ENSVURG00010022417
koala	MODERN SPECIES	178	RHOG (ENSPCIG00000021585)	PGAP2 (ENSPCIG00000021586)	NUP98 (ENSPCIG00000021590)	CHRNA10 (ENSPCIG00000021591)	ART1 (ENSPCIG00000021593)	ENSPCIG00000021594	ENSPCIG00000021595	ENSPCIG00000021596	RNF121 (ENSPCIG00000021597)	ENSPCIG00000021598	NUMA1 (ENSPCIG00000021599)	LRRC51 (ENSPCIG00000021600)	LAMTOR1 (ENSPCIG00000021601)	TOMT (ENSPCIG00000036693)	ANAPC15 (ENSPCIG00000021603)	ENSPCIG00000021613 ##22	INPPL1 (ENSPCIG00000021609)	PHOX2A (ENSPCIG00000021614)	CLPB (ENSPCIG00000021617)	ENSPCIG00000031991	ENSPCIG00000021622	ENSPCIG00000023347	ENSPCIG00000021623	CCNA1 (ENSPCIG00000021624)	SERTM1 (ENSPCIG00000021627)	RFXAP (ENSPCIG00000021628)	ENSPCIG00000021629	ALG5 (ENSPCIG00000021631)	EXOSC8 (ENSPCIG00000021634)	SUPT20H (ENSPCIG00000021637)
Wallaby	MODERN SPECIES	1916																ENSMEUG00000014453 ##22
Tasmanian devil	MODERN SPECIES	2	STIM1 (ENSSHAG00000025905)	RHOG (ENSSHAG00000027041)	PGAP2 (ENSSHAG00000022303)	NUP98 (ENSSHAG00000008956)	CHRNA10 (ENSSHAG00000008448)	ENSSHAG00000007813	ENSSHAG00000020578	ENSSHAG00000020511	ENSSHAG00000007137	ENSSHAG00000025707	ENSSHAG00000027844	LRRC51 (ENSSHAG00000002993)	NUMA1 (ENSSHAG00000005073)	TOMT (ENSSHAG00000024784)	ANAPC15 (ENSSHAG00000002646)	ENSSHAG00000027820 ##22	INPPL1 (ENSSHAG00000006877)	PHOX2A (ENSSHAG00000006734)	ENSSHAG00000002899	ENSSHAG00000000866	ENSSHAG00000001550	ENSSHAG00000000434	ENSSHAG00000003884	SERTM1 (ENSSHAG00000021330)	RFXAP (ENSSHAG00000023216)	ENSSHAG00000001186	ALG5 (ENSSHAG00000004230)	EXOSC8 (ENSSHAG00000005532)	SUPT20H (ENSSHAG00000005725)	POSTN (ENSSHAG00000011227)	TRPC4 (ENSSHAG00000011972)
Platypus	MODERN SPECIES	11	RHOG (ENSOANG00000008920)	PGAP2 (ENSOANG00000040661)	NUP98 (ENSOANG00000005159)	CHRNA10 (ENSOANG00000049777)	ENSOANG00000010012	ART5 (ENSOANG00000002242)	TRPC2 (ENSOANG00000037306)	XNDC1 (ENSOANG00000050597)	RNF121 (ENSOANG00000038960)	ENSOANG00000000597	LRRC51 (ENSOANG00000001784)	LAMTOR1 (ENSOANG00000042128)	TOMT (ENSOANG00000042216)	ANAPC15 (ENSOANG00000044213)	ENSOANG00000042603	ENSOANG00000043517 ##22	INPPL1 (ENSOANG00000010026)	ENSOANG00000040848	CLPB (ENSOANG00000008149)	ENSOANG00000013753	ENSOANG00000005516	ENSOANG00000003846	ENSOANG00000005326	ENSOANG00000008114	ENSOANG00000043749	ENSOANG00000015107	PDE2A (ENSOANG00000009297)	ENSOANG00000015978	ARAP1 (ENSOANG00000011819)	STARD10 (ENSOANG00000038761)	ENSOANG00000042170
Sauria	ANCESTRAL SPECIES	44	ENSGT00940000155158	ENSGT00510000047299	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT00940000169757	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00960000190355	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692	ENSGT00940000159817	ENSGT00960000190186	ENSGT00950000182887.C.a.b	ENSGT00390000015701
Lepidosauria	ANCESTRAL SPECIES	57	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT01030000234601.c.a.a.a	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00960000190355	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00940000174692	ENSGT00940000159817	ENSGT00940000175321	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b	ENSGT00390000015701
tuatara	MODERN SPECIES	323																ENSSPUG00000006367 #22	INPPL1 (ENSSPUG00000006321)	PHOX2A (ENSSPUG00000006299)	CLPB (ENSSPUG00000006272)	ENSSPUG00000006259	ENSSPUG00000006247	ARAP1 (ENSSPUG00000006218)
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT01030000234601.c.a.a.a	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00960000190355	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000174692	ENSGT00940000159817	ENSGT00390000015701	ENSGT00950000182887.C.a.b	ENSGT00940000153936.b	ENSGT00940000162049	ENSGT01080000257336.a.c.a	ENSGT00940000154868.b	ENSGT00940000158353	ENSGT00940000155001.B	ENSGT00390000006450	ENSGT00940000163239
Laterata	ANCESTRAL SPECIES	3	ENSGT00910000144246	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT01030000234601.c.a.a.a	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000159817	ENSGT00390000015701	ENSGT00950000182887.C.a.b	ENSGT00940000153936.b	ENSGT01080000257336.a.c.a	ENSGT00940000154868.b	ENSGT00940000158353	ENSGT00940000155001.B	ENSGT00390000006450	ENSGT00940000163239	ENSGT00940000161241	ENSGT00940000153680.b
Argentine black and white tegu	MODERN SPECIES	118	RRM1 (ENSSMRG00000001706)	STIM1 (ENSSMRG00000001690)	RHOG (ENSSMRG00000001677)	PGAP2 (ENSSMRG00000001672)	NUP98 (ENSSMRG00000001664)	ENSSMRG00000001662	ART1 (ENSSMRG00000001654)	ENSSMRG00000001612	RNF121 (ENSSMRG00000001602)	NUMA1 (ENSSMRG00000001562)	ENSSMRG00000001554	LAMTOR1 (ENSSMRG00000001547)	ENSSMRG00000001539	TOMT (ENSSMRG00000001129)	ANAPC15 (ENSSMRG00000001125)	ENSSMRG00000001117 #22	INPPL1 (ENSSMRG00000001092)	PHOX2A (ENSSMRG00000001049)	CLPB (ENSSMRG00000001026)	STARD10 (ENSSMRG00000001020)	ARAP1 (ENSSMRG00000000908)
Common wall lizard	MODERN SPECIES	12	ENSPMRG00000000555	ENSPMRG00000000566	ENSPMRG00000000578	ENSPMRG00000000598	ENSPMRG00000000662	ENSPMRG00000000787	XNDC1N (ENSPMRG00000000837)	RNF121 (ENSPMRG00000000865)	NUMA1 (ENSPMRG00000000897)	LRRC51 (ENSPMRG00000000933)	LAMTOR1 (ENSPMRG00000000945)	ENSPMRG00000000961	ENSPMRG00000000974	TOMT (ENSPMRG00000001056)	ANAPC15 (ENSPMRG00000001180)	ENSPMRG00000001190 #22	INPPL1 (ENSPMRG00000001205)	PHOX2A (ENSPMRG00000001227)	CLPB (ENSPMRG00000001260)	STARD10 (ENSPMRG00000001371)	ENSPMRG00000001383	ENSPMRG00000001391	ARAP1 (ENSPMRG00000001406)	ENSPMRG00000001441	ENSPMRG00000001450	PDE2A (ENSPMRG00000001460)	ENSPMRG00000001487	ENSPMRG00000001498	ARRB1 (ENSPMRG00000001506)	ENSPMRG00000001526	ATG16L2 (ENSPMRG00000001532)
Toxicofera	ANCESTRAL SPECIES	39	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT01030000234601.c.a.a.a	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00960000190355	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000174692	ENSGT00940000159817
Elapidae	ANCESTRAL SPECIES	37	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT01030000234601.c.a.a.a	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00960000190355	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000174692	ENSGT00940000159817	ENSGT00440000038181	ENSGT00940000153680.b	ENSGT00940000163239	ENSGT00390000006450	ENSGT00940000155001.B	ENSGT00940000158353	ENSGT00940000154868.b
Elapidae_a	ANCESTRAL SPECIES	162										ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961
Blue-lipped sea krait	MODERN SPECIES	9389													ENSLLTG00000010981	TOMT (ENSLLTG00000011002)	ANAPC15 (ENSLLTG00000011029)	ENSLLTG00000011064 #22
Indian cobra	MODERN SPECIES	4	ENSNNAG00000012282	NUP98 (ENSNNAG00000012188)	ENSNNAG00000012052	ENSNNAG00000012021	ENSNNAG00000011794	XNDC1N (ENSNNAG00000011752)	RNF121 (ENSNNAG00000011701)	NUMA1 (ENSNNAG00000011620)	ENSNNAG00000011589	LRRC51 (ENSNNAG00000011570)	ENSNNAG00000011546	LAMTOR1 (ENSNNAG00000011470)	ENSNNAG00000011394	TOMT (ENSNNAG00000011362)	ANAPC15 (ENSNNAG00000011340)	ENSNNAG00000011276 #22	INPPL1 (ENSNNAG00000010722)	PHOX2A (ENSNNAG00000010655)	CLPB (ENSNNAG00000009815)	STARD10 (ENSNNAG00000009731)	ENSNNAG00000009679	ENSNNAG00000009619	SPCS2 (ENSNNAG00000009593)	RNF169 (ENSNNAG00000009533)	ENSNNAG00000009517	LIPT2 (ENSNNAG00000009503)	KCNE3 (ENSNNAG00000009495)	ENSNNAG00000009314	ENSNNAG00000009293	ENSNNAG00000009282	ARRB1 (ENSNNAG00000009211)
Lizard	MODERN SPECIES	390																ENSACAG00000042663 #22
Archelosauria	ANCESTRAL SPECIES		ENSGT00510000047299	ENSGT01060000250461	ENSGT00550000074799	ENSGT00940000160721	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00960000190355	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692	ENSGT00940000159817	ENSGT00960000190186	ENSGT00950000182887.C.a.b	ENSGT00390000015701	ENSGT00940000162049	ENSGT01080000257336.a.c.a	ENSGT00940000154868.b	ENSGT00940000158353
Archosauria	ANCESTRAL SPECIES	2	ENSGT01090000260013.b.b	ENSGT00910000144246	ENSGT00940000165269	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT00390000013075.a	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00960000190186	ENSGT00950000182887.C.a.b	ENSGT00390000015701	ENSGT00940000162049	ENSGT01080000257336.a.c.a	ENSGT00940000154868.b	ENSGT00940000158353	ENSGT00940000155001.B
Aves	ANCESTRAL SPECIES	33	ENSGT01100000263522.B	ENSGT00910000144246	ENSGT00940000165269	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT00390000013075.a	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00960000190186	ENSGT00950000182887.C.a.b	ENSGT00390000015701	ENSGT00940000162049	ENSGT01080000257336.a.c.a	ENSGT00940000154868.b	ENSGT00940000158353	ENSGT00940000155001.B
Neognathae	DUPLICATION
Neognathae	ANCESTRAL SPECIES	1	ENSGT00960000189458	ENSGT01030000234601.c.a.a	ENSGT00940000160721	ENSGT00550000074799	ENSGT00510000047299	ENSGT00940000155158	ENSGT00390000000214.a.a	ENSGT00940000165269	ENSGT00910000144246	ENSGT01090000260013.b.b	ENSGT01100000263528.A.b.b	ENSGT01100000263528.A.b.a	ENSGT01100000263490.C.a	ENSGT01100000263490.D.a.a	ENSGT01090000259999.F	ENSGT00950000183144.A.c #22	ENSGT01100000263554.A.b	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT00940000156437.j.a.a	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00390000002732.n	ENSGT00940000155116.a	ENSGT00950000182936.a.a.a	ENSGT00940000159415	ENSGT01100000263563.c.a	ENSGT00950000183182.b	ENSGT00390000000002.a.b	ENSGT00390000009178	ENSGT00940000158173	ENSGT00950000183040.A.a	ENSGT00450000040326
Neognathae_b	ANCESTRAL SPECIES	38	ENSGT00940000165269	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT00960000189458	ENSGT00390000013075.a	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.d #22	ENSGT00950000183144.A.c #22	ENSGT01100000263554.A.b	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT00940000156437.j.a.a	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00390000002732.n	ENSGT00950000182936.a.a.a	ENSGT00940000159415	ENSGT01100000263563.c.a	ENSGT00950000183182.b	ENSGT00390000000002.a.b	ENSGT00390000009178	ENSGT00940000158173	ENSGT00950000183040.A.a	ENSGT00450000040326	ENSGT00390000006189
Neognathae_c	ANCESTRAL SPECIES	11	ENSGT00940000155158	ENSGT00390000000214.a.a	ENSGT00940000165269	ENSGT00910000144246	ENSGT01090000260013.b.b	ENSGT01100000263528.A.b.b	ENSGT01100000263528.A.b.a	ENSGT01100000263490.C.a	ENSGT01100000263490.D.a.a	ENSGT00960000189084.j	ENSGT00940000157809.f.b.a.b	ENSGT00940000157809.f.b.a.a	ENSGT00960000189084.i	ENSGT00940000157809.f.a	ENSGT00390000010849.b.b	ENSGT00950000183144.A.c #22	ENSGT01100000263554.A.b	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT00940000156437.j.a.a	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00390000002732.n	ENSGT00950000182936.a.a.a	ENSGT00940000159415	ENSGT01100000263563.c.a	ENSGT00950000183182.b	ENSGT00390000000002.a.b	ENSGT00390000009178	ENSGT00940000158173	ENSGT00950000183040.A.a	ENSGT00450000040326	ENSGT00940000155956
Golden eagle	MODERN SPECIES	10	RHOG (ENSACCG00020010356)	STIM1 (ENSACCG00020010385)	ENSACCG00020010406	RRM1 (ENSACCG00020010420)	ENSACCG00020010446	ENSACCG00020010456	ENSACCG00020010465	OR52R1 (ENSACCG00020010475)	ENSACCG00020010520	ENSACCG00020010578	ENSACCG00020010594	ENSACCG00020010609	ENSACCG00020010616	ENSACCG00020010627	ENSACCG00020010635	ENSACCG00020010643 #22	OR51Q1 (ENSACCG00020010649)	ENSACCG00020010657	ENSACCG00020010662	ENSACCG00020010672	RPS11 (ENSACCG00020010680)	FHIP1B (ENSACCG00020010699)	CNGA4 (ENSACCG00020010709)	CCKBR (ENSACCG00020010725)	SMPD1 (ENSACCG00020010734)	APBB1 (ENSACCG00020010749)	HPX (ENSACCG00020010777)	TRIM3 (ENSACCG00020010804)	ARFIP2 (ENSACCG00020010820)	ENSACCG00020010833	ENSACCG00020010860
Kakapo	MODERN SPECIES	11										LCMT2 (ENSSHBG00005018406)	ENSSHBG00005018404	TPP1 (ENSSHBG00005018401)	ILK (ENSSHBG00005018398)	ENSSHBG00005018395	ARFIP2 (ENSSHBG00005018392)	ENSSHBG00005018386 #22	ENSSHBG00005018383	ENSSHBG00005018380	ENSSHBG00005018377	OR51E2 (ENSSHBG00005018376)	ENSSHBG00005018373	ENSSHBG00005018371	ENSSHBG00005018369	ENSSHBG00005018367	ENSSHBG00005018357	RRM1 (ENSSHBG00005018339)	ENSSHBG00005018324	STIM1 (ENSSHBG00005018045)	RHOG (ENSSHBG00005018023)	PGAP2 (ENSSHBG00005018020)	NUP98 (ENSSHBG00005017948)
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00550000074783	ENSGT00940000164659	ENSGT00940000158923	ENSGT00390000000455.a	ENSGT00390000016499	ENSGT00960000189458	ENSGT00390000013075.a	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.d #22	ENSGT00950000183144.A.c #22	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00390000002732.n	ENSGT00950000182936.a.a.a	ENSGT00940000159415	ENSGT01100000263563.c.a	ENSGT00950000183182.b	ENSGT00390000000002.a.b	ENSGT00940000158173	ENSGT00950000183040.A.a	ENSGT00450000040326	ENSGT00390000006189	ENSGT00940000155956	ENSGT00390000009368	ENSGT00390000008684
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00940000157065	ENSGT00940000154065.b	ENSGT00940000155131	ENSGT00940000160503	ENSGT00940000158406	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000161651	ENSGT00910000144246	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799.b	ENSGT00550000074799.a	ENSGT00940000160721	ENSGT00950000183144.A.c #22	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00950000182936.a.a.a	ENSGT00940000159415	ENSGT01100000263563.c.a	ENSGT00950000183182.b	ENSGT00390000000002.a.b	ENSGT00940000158173	ENSGT00950000183040.A.a	ENSGT00450000040326	ENSGT00390000006189	ENSGT00940000155956	ENSGT00390000009368	ENSGT00390000008684	ENSGT00940000163671.b
Flycatcher	MODERN SPECIES		TMEM50B (ENSFALG00000028536)	ENSFALG00000010690	IFNAR1 (ENSFALG00000011897)	ENSFALG00000028738	RRM1 (ENSFALG00000010231)	STIM1 (ENSFALG00000010216)	ENSFALG00000010208	ENSFALG00000010169	ENSFALG00000023801	ENSFALG00000010152	ENSFALG00000010148	ENSFALG00000024788	ENSFALG00000028820	ENSFALG00000024983	ENSFALG00000026135	ENSFALG00000008071 #22	ENSFALG00000008084	CCKBR (ENSFALG00000008124)	ENSFALG00000028863	ENSFALG00000026748	ENSFALG00000022940	ENSFALG00000028757	ENSFALG00000027466	TRIM3 (ENSFALG00000008157)	ARFIP2 (ENSFALG00000008168)	ENSFALG00000028777	ENSFALG00000026258	ENSFALG00000008171	TAF10 (ENSFALG00000027096)	ILK (ENSFALG00000008183)	ENSFALG00000028061
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00940000157065	ENSGT00940000154065.b	ENSGT00940000155131	ENSGT00940000160503	ENSGT00940000158406	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000161651	ENSGT00910000144246	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799.b	ENSGT00550000074799.a	ENSGT00940000160721	ENSGT00950000183144.A.c #22	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00940000164975	ENSGT00950000182936.a.a.a	ENSGT00940000159415	ENSGT01100000263563.c.a	ENSGT00950000183182.b	ENSGT00390000000002.a.b	ENSGT00940000158173	ENSGT00950000183040.A.a	ENSGT00450000040326	ENSGT00390000006189	ENSGT00940000155956	ENSGT00390000009368	ENSGT00390000008684
Medium ground finch	MODERN SPECIES	421										ENSGFOG00000005304	ENSGFOG00000005326	ENSGFOG00000005367	ENSGFOG00000005377	ENSGFOG00000005383	ENSGFOG00000005396	ENSGFOG00000005404 #22	ENSGFOG00000005416	ENSGFOG00000005422
Passeroidea	ANCESTRAL SPECIES	10	ENSGT00940000158406	ENSGT00940000158231	ENSGT00510000049322	ENSGT00940000161651	ENSGT00910000144246	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799.b	ENSGT00550000074799.a	ENSGT00940000160721	ENSGT01090000259999.F	ENSGT01100000263490.D.a.a	ENSGT00940000157809.e.a.b	ENSGT00390000010849.b.a.a	ENSGT00950000183144.A.c #22	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00940000164975	ENSGT00950000182936.a.a.a	ENSGT00940000159415	ENSGT01100000263563.c.a	ENSGT00950000183182.b	ENSGT00390000000002.a.b	ENSGT00940000158173	ENSGT00950000183040.A.a	ENSGT00450000040326	ENSGT00390000006189	ENSGT00940000155956	ENSGT00390000009368	ENSGT00390000008684
Zebra finch	MODERN SPECIES		ENSTGUG00000027670	ENSTGUG00000019322	ENSTGUG00000000544	STIM1 (ENSTGUG00000023766)	ENSTGUG00000019583	NUP98 (ENSTGUG00000000556)	CHRNA10 (ENSTGUG00000023632)	ENSTGUG00000000569	OR51E2 (ENSTGUG00000027638)	ENSTGUG00000027908	ENSTGUG00000020222	ENSTGUG00000020485	ENSTGUG00000026720	ENSTGUG00000027415	ENSTGUG00000023257	ENSTGUG00000023804 #22	ENSTGUG00000028762	ENSTGUG00000024431	RPS11 (ENSTGUG00000000582)	ENSTGUG00000000588	CNGA4 (ENSTGUG00000022508)	ENSTGUG00000025680	ENSTGUG00000022950	ENSTGUG00000029169	ENSTGUG00000028748	ENSTGUG00000028105	SMPD1 (ENSTGUG00000021401)	ENSTGUG00000020302	TRIM3 (ENSTGUG00000000602)	ARFIP2 (ENSTGUG00000014784)	ENSTGUG00000025726
Common canary	MODERN SPECIES	103									ENSSCAG00000008463	ENSSCAG00000008410	OR51E2 (ENSSCAG00000008404)	ENSSCAG00000008402	ENSSCAG00000008400	ENSSCAG00000008397	ENSSCAG00000007903	ENSSCAG00000007819 #22	ENSSCAG00000007811	ENSSCAG00000007803	SLC5A3 (ENSSCAG00000007799)
Great tit	DUPLICATION
Great tit	MODERN SPECIES		C3orf52 (ENSPMJG00000011933)	ENSPMJG00000011934	ENSPMJG00000011935	CD200 (ENSPMJG00000011936)	LTN1 (ENSPMJG00000011937)	RWDD2B (ENSPMJG00000011938)	USP16 (ENSPMJG00000011939)	CCT8 (ENSPMJG00000012001)	ENSPMJG00000012002	BACH1 (ENSPMJG00000012003)	PAXBP1 (ENSPMJG00000012004)	C21orf62 (ENSPMJG00000012005)	RNF121 (ENSPMJG00000012007)	NUMA1 (ENSPMJG00000012008)	ENSPMJG00000012009	ENSPMJG00000012010 #22	ENSPMJG00000012014	ENSPMJG00000012015	C21orf91 (ENSPMJG00000012017)	CHODL (ENSPMJG00000012021)	TMPRSS15 (ENSPMJG00000012023)	NCAM2 (ENSPMJG00000012066)	MRPL39 (ENSPMJG00000012068)	JAM2 (ENSPMJG00000012069)	ENSPMJG00000012070	GABPA (ENSPMJG00000012071)	APP (ENSPMJG00000012072)	ENSPMJG00000012073	MAP6 (ENSPMJG00000012079)	ENSPMJG00000012080	MOGAT2 (ENSPMJG00000012081)
Great tit	MODERN SPECIES					RRM1 (ENSPMJG00000000066)	STIM1 (ENSPMJG00000000616)	RHOG (ENSPMJG00000000889)	ENSPMJG00000000891	NUP98 (ENSPMJG00000000924)	ENSPMJG00000005448	ENSPMJG00000005449	ENSPMJG00000005450	ENSPMJG00000005451	ENSPMJG00000005452	ENSPMJG00000005478	ENSPMJG00000005479	ENSPMJG00000005480 #22	ENSPMJG00000005482	ENSPMJG00000005486	RPS11 (ENSPMJG00000005488)	FHIP1B (ENSPMJG00000005493)	CNGA4 (ENSPMJG00000005623)	CCKBR (ENSPMJG00000005649)	SMPD1 (ENSPMJG00000005650)	APBB1 (ENSPMJG00000005651)	TRIM3 (ENSPMJG00000005653)	ARFIP2 (ENSPMJG00000005656)	ENSPMJG00000005658	ENSPMJG00000005659	ENSPMJG00000005669	ENSPMJG00000005672	ENSPMJG00000005677
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00940000162049	ENSGT00940000161067.y.b	ENSGT00390000015701	ENSGT00950000182887.C.a.b	ENSGT00960000190186	ENSGT00550000074799	ENSGT00510000047299	ENSGT00940000155158	ENSGT00390000000214.a.a	ENSGT00940000165269	ENSGT00910000144246	ENSGT01090000260013.b.b	ENSGT01090000260013.b.a.a.a.b	ENSGT01100000263490.A.a.a.a	ENSGT01090000260043.a.a.a.b.b.a.a.a	ENSGT00950000183144.A.c #22	ENSGT01100000263554.A.b	ENSGT00390000002732.n	ENSGT00950000182936.a.a.a	ENSGT00940000159415	ENSGT01100000263563.c.a	ENSGT00950000183182.b	ENSGT00390000000002.a.b	ENSGT00390000009178	ENSGT00940000158173	ENSGT00950000183040.A.a	ENSGT00450000040326	ENSGT00390000006189	ENSGT00940000155956	ENSGT00390000009368	ENSGT00390000008684
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000155158	ENSGT00390000000214.a.a	ENSGT00940000165269	ENSGT00910000144246	ENSGT01090000260013.b.b	ENSGT01100000263528.A.b.b	ENSGT01090000259999.F	ENSGT01100000263490.D.a.a	ENSGT01090000260013.b.a.a.a.b	ENSGT00960000189084.h	ENSGT00940000157809.e.b	ENSGT00390000010849.b	ENSGT00940000157809.e.a.a.b	ENSGT00390000010849.a.e.b	ENSGT01090000260043.a.a.a.b.b.a.a.a	ENSGT00950000183144.A.c #22	ENSGT01100000263554.A.b	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT00940000156437.j.a.a	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00390000002732.n	ENSGT00950000182936.a.a.a	ENSGT00940000159415	ENSGT01100000263563.c.a	ENSGT00950000183182.b	ENSGT00390000000002.a.b	ENSGT00390000009178	ENSGT00940000158173	ENSGT00950000183040.A.a	ENSGT00450000040326	ENSGT00390000006189
Japanese quail	MODERN SPECIES		RHOG (ENSCJPG00005005696)	STIM1 (ENSCJPG00005005690)	ENSCJPG00005005675	RRM1 (ENSCJPG00005005673)	ENSCJPG00005005671	ENSCJPG00005005670	ENSCJPG00005005666	OR51E2 (ENSCJPG00005005660)	ENSCJPG00005005657	ENSCJPG00005005655	ENSCJPG00005005654	ENSCJPG00005005652	ENSCJPG00005005650	ENSCJPG00005005649	ENSCJPG00005005510	ENSCJPG00005005507 #22	ENSCJPG00005005504	ENSCJPG00005005502	ENSCJPG00005005500	ENSCJPG00005005498	RPS11 (ENSCJPG00005005488)	FHIP1B (ENSCJPG00005005483)	CNGA4 (ENSCJPG00005005481)	CCKBR (ENSCJPG00005005479)	SMPD1 (ENSCJPG00005005471)	APBB1 (ENSCJPG00005005399)	HPX (ENSCJPG00005005397)	ARFIP2 (ENSCJPG00005005388)	TIMM10B (ENSCJPG00005005386)	ENSCJPG00005005381	RRP8 (ENSCJPG00005005367)
Phasianidae_b	ANCESTRAL SPECIES	45											ENSGT01100000263554.A.a	ENSGT00390000010849.a.e.b	ENSGT00390000010849.b	ENSGT00940000157809.e.a.a.b	ENSGT01090000260043.a.a.a.b.b.a.a.a	ENSGT00950000183144.A.c #22	ENSGT01100000263554.A.b	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT00940000156437.j.a.a	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00390000002732.n	ENSGT00950000182936.a.a.a	ENSGT00940000159415	ENSGT01100000263563.c.a	ENSGT00950000183182.b	ENSGT00390000000002.a.b	ENSGT00390000009178	ENSGT00940000158173	ENSGT00950000183040.A.a	ENSGT00450000040326	ENSGT00940000155956
Chicken	MODERN SPECIES		ENSGALG00010003535	ENSGALG00010003269	ENSGALG00010003539	OR51E2 (ENSGALG00010003320)	ENSGALG00010003296	ENSGALG00010003326	ENSGALG00010003342	ENSGALG00010003339	OR52R1 (ENSGALG00010003544)	OR51M1 (ENSGALG00010003349)	HBBA (ENSGALG00010003868)	ENSGALG00010003371	ENSGALG00010003379	HBE1 (ENSGALG00010003363)	ENSGALG00010003389	FOLR1 (ENSGALG00010003415) #22	ENSGALG00010003450	OR52B2L (ENSGALG00010003487)	ENSGALG00010003494	ENSGALG00010003499	RPS11 (ENSGALG00010001654)	FHIP1B (ENSGALG00010001551)	CNGA4 (ENSGALG00010001553)	CCKBR (ENSGALG00010001558)	SMPD1 (ENSGALG00010001570)	APBB1 (ENSGALG00010001605)	HPX (ENSGALG00010001612)	TRIM3 (ENSGALG00010001617)	ARFIP2 (ENSGALG00010001627)	TIMM10B (ENSGALG00010001635)	ENSGALG00010001674
Turkey	MODERN SPECIES		RHOG (ENSMGAG00000016029)	STIM1 (ENSMGAG00000022860)	ENSMGAG00000010735	RRM1 (ENSMGAG00000010749)	ENSMGAG00000016213	ENSMGAG00000016218	ENSMGAG00000017212	OR51E2 (ENSMGAG00000010773)	ENSMGAG00000016220	ENSMGAG00000014964	ENSMGAG00000021241	ENSMGAG00000014945	ENSMGAG00000014944	ENSMGAG00000014946	ENSMGAG00000019891	ENSMGAG00000015285 #22	ENSMGAG00000015283	ENSMGAG00000021488	ENSMGAG00000015319	ENSMGAG00000009652	CNGA4 (ENSMGAG00000019671)	CCKBR (ENSMGAG00000007144)	ARFIP2 (ENSMGAG00000015281)	ENSMGAG00000015279	ENSMGAG00000015217 #9	ENSMGAG00000017364 ##8	ENSMGAG00000015216 #8	ENSMGAG00000015218 ##8	ENSMGAG00000015220	ENSMGAG00000020786	ENSMGAG00000015221
Anatidae	ANCESTRAL SPECIES	56	ENSGT00910000144246.d	ENSGT01090000260013.b.b	ENSGT01100000263528.A.b.b	ENSGT01100000263528.A.b.a	ENSGT01100000263490.C.a	ENSGT01090000259999.F	ENSGT01100000263490.D.a.a	ENSGT01090000260013.b.a.a.a.b	ENSGT00940000157809.e.b	ENSGT00960000189084.g	ENSGT00940000157809.f.a	ENSGT00390000010849.b	ENSGT00940000157809.e.a.a.a	ENSGT01100000263490.A.a.a.a	ENSGT01090000260043.a.a.a.b.b.a.a.a	ENSGT00950000183144.A.c #22	ENSGT01100000263554.A.b	ENSGT00940000155116.a	ENSGT00950000182936.a.a.a	ENSGT00940000159415	ENSGT01100000263563.c.a	ENSGT00390000000002.a.b	ENSGT00390000009178	ENSGT00940000158173	ENSGT00950000183040.A.a	ENSGT00450000040326	ENSGT00940000155956	ENSGT00390000009368	ENSGT00390000008684	ENSGT00940000163671.b.f	ENSGT00940000162599
Duck	MODERN SPECIES		STIM1 (ENSAPLG00000013672)	ENSAPLG00000015156	RRM1 (ENSAPLG00000030799)	ENSAPLG00000000847	ENSAPLG00000014541	ENSAPLG00000000841	ENSAPLG00000000833	ENSAPLG00000000832	OR51E2 (ENSAPLG00000000823)	OR52R1 (ENSAPLG00000000781)	ENSAPLG00000022038	ENSAPLG00000022404	ENSAPLG00000023947	ENSAPLG00000001553	ENSAPLG00000002208	ENSAPLG00000003503 #22	ENSAPLG00000015040	ENSAPLG00000011624	RPS11 (ENSAPLG00000010997)	ENSAPLG00000023002	FHIP1B (ENSAPLG00000006910)	SMPD1 (ENSAPLG00000030260)	CCKBR (ENSAPLG00000006606)	APBB1 (ENSAPLG00000021238)	HPX (ENSAPLG00000028385)	TIMM10B (ENSAPLG00000025254)	ENSAPLG00000009463	ENSAPLG00000020105	ENSAPLG00000024979	ENSAPLG00000029753	ENSAPLG00000029556
Pink-footed goose	MODERN SPECIES	278	ILK (ENSABRG00000001278)	ENSABRG00000001223	TIMM10B (ENSABRG00000001192)	ARFIP2 (ENSABRG00000001173)	TRIM3 (ENSABRG00000001142)	HPX (ENSABRG00000001101)	APBB1 (ENSABRG00000001000)	CCKBR (ENSABRG00000000945)	CNGA4 (ENSABRG00000000926)	FHIP1B (ENSABRG00000000820)	ENSABRG00000000791	RPS11 (ENSABRG00000000727)	ENSABRG00000012410	ENSABRG00000012407	ENSABRG00000012400	ENSABRG00000012390 #22	ENSABRG00000012354	ENSABRG00000012346	ENSABRG00000012341	ENSABRG00000012338	ENSABRG00000012330	ENSABRG00000012324	ENSABRG00000012322	ENSABRG00000012295	ENSABRG00000012276	ENSABRG00000012269	RRM1 (ENSABRG00000012244)	ENSABRG00000012223	STIM1 (ENSABRG00000012210)	RHOG (ENSABRG00000012195)	PGAP2 (ENSABRG00000012184)
Neognathae	ANCESTRAL SPECIES	1	ENSGT00940000165269	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT00960000189458	ENSGT00390000013075.a	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.d #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00960000190186	ENSGT00950000182887.C.a.b	ENSGT00390000015701	ENSGT00940000162049	ENSGT01080000257336.a.c.a	ENSGT00940000154868.b	ENSGT00940000158353	ENSGT00940000155001.B	ENSGT00390000006450
Neognathae_b	ANCESTRAL SPECIES	38	ENSGT00910000144246	ENSGT00940000165269	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT00940000160721	ENSGT01030000234601.c.a.a	ENSGT00960000189458	ENSGT00390000013075.a	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.d #22	ENSGT00950000183144.A.c #22	ENSGT01100000263554.A.b	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT00940000156437.j.a.a	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00390000002732.n	ENSGT00950000182936.a.a.a	ENSGT00940000159415	ENSGT01100000263563.c.a	ENSGT00950000183182.b	ENSGT00390000000002.a.b	ENSGT00390000009178	ENSGT00940000158173	ENSGT00950000183040.A.a	ENSGT00450000040326
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00390000016055	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00550000074783	ENSGT00940000164659	ENSGT00940000158923	ENSGT00390000000455.a	ENSGT00390000016499	ENSGT00960000189458	ENSGT00390000013075.a	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.d #22	ENSGT00950000183144.A.c #22	ENSGT01090000260043.a.a.a.b.b.a.b	ENSGT01090000260043.a.a.a.b.b.b	ENSGT00390000002732.n	ENSGT00950000182936.a.a.a	ENSGT00940000159415	ENSGT01100000263563.c.a	ENSGT00950000183182.b	ENSGT00390000000002.a.b	ENSGT00940000158173	ENSGT00950000183040.A.a	ENSGT00450000040326	ENSGT00390000006189	ENSGT00940000155956	ENSGT00390000009368
Great tit	MODERN SPECIES		GBE1 (ENSPMJG00000012145)	ENSPMJG00000012144	ENSPMJG00000012140	ROBO2 (ENSPMJG00000012139)	ENSPMJG00000012138	ENSPMJG00000012137	ENSPMJG00000012135	HSPA13 (ENSPMJG00000012134)	SAMSN1 (ENSPMJG00000012133)	NRIP1 (ENSPMJG00000012131)	USP25 (ENSPMJG00000012125)	CXADR (ENSPMJG00000012108)	LAMTOR1 (ENSPMJG00000012106)	ENSPMJG00000012105	ENSPMJG00000012104	ENSPMJG00000012103 #22	INPPL1 (ENSPMJG00000012102)	PHOX2A (ENSPMJG00000012101)	CLPB (ENSPMJG00000012100)	STARD10 (ENSPMJG00000012099)	ARAP1 (ENSPMJG00000012098)	PDE2A (ENSPMJG00000012097)	ARRB1 (ENSPMJG00000012096)	WDR73 (ENSPMJG00000012095)	ENSPMJG00000012093	EMSY (ENSPMJG00000012091)	THAP12 (ENSPMJG00000012090)	WNT11 (ENSPMJG00000012085)	UVRAG (ENSPMJG00000012083)	DGAT2 (ENSPMJG00000012082)	MOGAT2 (ENSPMJG00000012081)
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00390000016055	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00550000074783	ENSGT00940000164659	ENSGT00940000158923	ENSGT00390000000455.a	ENSGT00390000016499	ENSGT00960000189458	ENSGT00390000013075.a	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00390000016789.f	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.d #22
Passeriformes_g	ANCESTRAL SPECIES	25	ENSGT00530000063970.d	ENSGT00390000016055	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00550000074783	ENSGT00940000164659	ENSGT00940000158923	ENSGT00390000000455.a	ENSGT00390000016499	ENSGT00960000189458	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00390000016789.f	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.d #22
Passeroidea	ANCESTRAL SPECIES	5	ENSGT00530000063970.c.a	ENSGT00530000063970.d	ENSGT00390000016055	ENSGT00390000007224.b	ENSGT00940000156013	ENSGT00550000074783	ENSGT00940000164659	ENSGT00940000158923	ENSGT00390000000455.a	ENSGT00960000189458	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00390000016789.f	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.d #22
Common canary	MODERN SPECIES	33	NIT2 (ENSSCAG00000016724)	TBC1D23 (ENSSCAG00000016719)	FILIP1L (ENSSCAG00000016716)	CMSS1 (ENSSCAG00000016713)	ENSSCAG00000016711	CCT8 (ENSSCAG00000016698)	ENSSCAG00000016690	BACH1 (ENSSCAG00000016686)	PAXBP1 (ENSSCAG00000016662)	RNF121 (ENSSCAG00000016654)	ENSSCAG00000016652	NUMA1 (ENSSCAG00000016646)	ENSSCAG00000016642	TOMT (ENSSCAG00000016640)	ANAPC15 (ENSSCAG00000016638)	ENSSCAG00000016635 #22	INPPL1 (ENSSCAG00000016621)	ENSSCAG00000016608	PHOX2A (ENSSCAG00000016594)	CLPB (ENSSCAG00000016581)	STARD10 (ENSSCAG00000016576)	ARAP1 (ENSSCAG00000016530)	PDE2A (ENSSCAG00000016517)	ARRB1 (ENSSCAG00000016514)	WDR73 (ENSSCAG00000016509)	NCAM2 (ENSSCAG00000016497)
Zebra finch	MODERN SPECIES		ENSTGUG00000015867	CD200 (ENSTGUG00000013591)	LTN1 (ENSTGUG00000013590)	RWDD2B (ENSTGUG00000013589)	USP16 (ENSTGUG00000013588)	CCT8 (ENSTGUG00000013587)	ENSTGUG00000013586	BACH1 (ENSTGUG00000013585)	PAXBP1 (ENSTGUG00000013579)	RNF121 (ENSTGUG00000013584)	ENSTGUG00000019101	NUMA1 (ENSTGUG00000025341)	LAMTOR1 (ENSTGUG00000013581)	TOMT (ENSTGUG00000019290)	ANAPC15 (ENSTGUG00000018949)	ENSTGUG00000013578 #22	INPPL1 (ENSTGUG00000021546)	PHOX2A (ENSTGUG00000027907)	CLPB (ENSTGUG00000013575)	ARAP1 (ENSTGUG00000013572)	PDE2A (ENSTGUG00000013571)	ARRB1 (ENSTGUG00000013570)	WDR73 (ENSTGUG00000013569)	ENSTGUG00000013568	EMSY (ENSTGUG00000013566)	THAP12 (ENSTGUG00000013565)	WNT11 (ENSTGUG00000013564)	UVRAG (ENSTGUG00000013563)	DGAT2 (ENSTGUG00000013562)	MOGAT2 (ENSTGUG00000013561)	ENSTGUG00000024357
Medium ground finch	MODERN SPECIES	269					CCT8 (ENSGFOG00000013961)	ENSGFOG00000013959	BACH1 (ENSGFOG00000013958)	PAXBP1 (ENSGFOG00000013953)	C21orf62 (ENSGFOG00000013950)	ENSGFOG00000013949	RNF121 (ENSGFOG00000013947)	NUMA1 (ENSGFOG00000013944)	LAMTOR1 (ENSGFOG00000013942)	TOMT (ENSGFOG00000013941)	ANAPC15 (ENSGFOG00000013940)	ENSGFOG00000013939 #22	CLPB (ENSGFOG00000013914)	STARD10 (ENSGFOG00000013913)	ARAP1 (ENSGFOG00000013613)	PDE2A (ENSGFOG00000013566)	ARRB1 (ENSGFOG00000013557)	WDR73 (ENSGFOG00000013554)	ENSGFOG00000013553	EMSY (ENSGFOG00000013548)
Flycatcher	MODERN SPECIES		USP16 (ENSFALG00000006325)	CCT8 (ENSFALG00000006323)	ENSFALG00000024393	ENSFALG00000006320	BACH1 (ENSFALG00000006318)	ENSFALG00000006314	ENSFALG00000023758	ENSFALG00000006310	ENSFALG00000027906	ENSFALG00000006307	ENSFALG00000006305	NUMA1 (ENSFALG00000006299)	LAMTOR1 (ENSFALG00000025763)	TOMT (ENSFALG00000006289)	ANAPC15 (ENSFALG00000006281)	ENSFALG00000006276 #22	INPPL1 (ENSFALG00000006266)	PHOX2A (ENSFALG00000006255)	CLPB (ENSFALG00000006254)	STARD10 (ENSFALG00000023469)	ENSFALG00000006247	PDE2A (ENSFALG00000006241)	ENSFALG00000006237	ENSFALG00000006235	ENSFALG00000006232	EMSY (ENSFALG00000006228)	THAP12 (ENSFALG00000006223)	ENSFALG00000027681	WNT11 (ENSFALG00000006210)	ENSFALG00000027208	UVRAG (ENSFALG00000011910)
Neognathae_c	ANCESTRAL SPECIES	11	ENSGT01090000260013.b.b	ENSGT00910000144246	ENSGT00940000165269	ENSGT00390000000214.a.a	ENSGT00940000155158	ENSGT00510000047299	ENSGT00550000074799	ENSGT01030000234601.c.a.a	ENSGT00960000189458	ENSGT00390000013075.a	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00390000016789	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.d #22	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00950000182887.C.a.b	ENSGT00390000015701	ENSGT00940000162049	ENSGT01080000257336.a.c.a	ENSGT00940000154868.b	ENSGT00940000158353	ENSGT00940000155001.B	ENSGT00390000006450	ENSGT00940000163239	ENSGT00940000161241
Kakapo	MODERN SPECIES	11	STIM1 (ENSSHBG00005018045)	RHOG (ENSSHBG00005018023)	PGAP2 (ENSSHBG00005018020)	NUP98 (ENSSHBG00005017948)	ENSSHBG00005017895	ENSSHBG00005017889	ENSSHBG00005017877	ENSSHBG00005017870	ENSSHBG00005017863	RNF121 (ENSSHBG00005017857)	XNDC1N (ENSSHBG00005017851)	NUMA1 (ENSSHBG00005017815)	LAMTOR1 (ENSSHBG00005017801)	TOMT (ENSSHBG00005017795)	ANAPC15 (ENSSHBG00005017790)	ENSSHBG00005017788 #22	ENSSHBG00005017762	PHOX2A (ENSSHBG00005017760)	CLPB (ENSSHBG00005017755)	STARD10 (ENSSHBG00005017749)	ARAP1 (ENSSHBG00005008177)	PDE2A (ENSSHBG00005007700)	ENSSHBG00005007683	ARRB1 (ENSSHBG00005007666)	ENSSHBG00005007652	ENSSHBG00005007648	SLCO2B1 (ENSSHBG00005007635)	ENSSHBG00005007625	PGM2L1 (ENSSHBG00005007613)	KCNE3 (ENSSHBG00005007603)	LIPT2 (ENSSHBG00005007598)
Golden eagle	MODERN SPECIES	10	RRM1 (ENSACCG00020010420)	ENSACCG00020010406	STIM1 (ENSACCG00020010385)	RHOG (ENSACCG00020010356)	PGAP2 (ENSACCG00020010341)	NUP98 (ENSACCG00020010314)	ENSACCG00020010289	ART1 (ENSACCG00020010280)	ENSACCG00020010268	RNF121 (ENSACCG00020010256)	XNDC1N (ENSACCG00020010242)	NUMA1 (ENSACCG00020010219)	LAMTOR1 (ENSACCG00020010208)	TOMT (ENSACCG00020010198)	ANAPC15 (ENSACCG00020010189)	ENSACCG00020010179 #22	PHOX2A (ENSACCG00020010151)	CLPB (ENSACCG00020010131)	STARD10 (ENSACCG00020010098)	ARAP1 (ENSACCG00020010037)	PDE2A (ENSACCG00020009991)	ARRB1 (ENSACCG00020009965)	WDR73 (ENSACCG00020009949)	ENSACCG00020009942	SLCO2B1 (ENSACCG00020009937)	ENSACCG00020009918	PGM2L1 (ENSACCG00020009896)	KCNE3 (ENSACCG00020009883)	LIPT2 (ENSACCG00020009876)	ENSACCG00020009858	CHRDL2 (ENSACCG00020009830)
Galloanserae	ANCESTRAL SPECIES																	ENSGT00950000183144.A.d #22
Phasianidae	ANCESTRAL SPECIES																	ENSGT00950000183144.A.d #22
Phasianidae_b	ANCESTRAL SPECIES																	ENSGT00950000183144.A.d #22
Turkey	MODERN SPECIES	344																ENSMGAG00000021440 #22
Chicken	MODERN SPECIES		THAP12 (ENSGALG00010002348)	WNT11 (ENSGALG00010002356)	UVRAG (ENSGALG00010002368)	ART7B (ENSGALG00010002377)	ART7C (ENSGALG00010003832)	ENSGALG00010002388	ENSGALG00010003839	ART1L2 (ENSGALG00010002382)	ENSGALG00010002398	RNF175 (ENSGALG00010002410)	ENSGALG00010002411	NUMA1 (ENSGALG00010002430)	LRRC51 (ENSGALG00010002440)	LAMTOR1 (ENSGALG00010002460)	TOMT (ENSGALG00010002461)	ENSGALG00010002465 #22	STARD10 (ENSGALG00010001717)	ENSGALG00010001731	ENSGALG00010001740	ENSGALG00010001744	ENSGALG00010001746	ENSGALG00010001748	ARRB1 (ENSGALG00010001752)	ENSGALG00010001771	ENSGALG00010001774	SLCO2B1 (ENSGALG00010001796)	ENSGALG00010003512	PGM2L1 (ENSGALG00010001820)	KCNE3 (ENSGALG00010001822)	LIPT2 (ENSGALG00010001825)	POLD3 (ENSGALG00010001829)
Cryptodira	ANCESTRAL SPECIES	29	ENSGT01030000234601.c.a.a	ENSGT01030000234601.c.b.b	ENSGT01030000234601.c.b.a.f.b	ENSGT01030000234601.c.b.a.e	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00960000190355	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000166245	ENSGT01030000234621.C.a.a.a	ENSGT01030000234582.f.a.a	ENSGT00390000002414	ENSGT00940000165703	ENSGT00940000164773	ENSGT00730000111220	ENSGT00940000161362	ENSGT00940000160128	ENSGT00940000167491	ENSGT00950000183061.a.a.a.a.b	ENSGT00940000153168.A	ENSGT00940000160157	ENSGT00940000155516
Chinese turtle	DUPLICATION
Chinese turtle	DUPLICATION
Chinese turtle	MODERN SPECIES	173												CLPB (ENSPSIG00000002250)	PHOX2A (ENSPSIG00000002287)	INPPL1 (ENSPSIG00000002289)	ENSPSIG00000002325 #22	ENSPSIG00000002326 #22	ENSPSIG00000002332 #22	TOMT (ENSPSIG00000002345)	ENSPSIG00000002356	LAMTOR1 (ENSPSIG00000002359)	LRRC51 (ENSPSIG00000002362)	NUMA1 (ENSPSIG00000002377)	RNF121 (ENSPSIG00000002388)	ENSPSIG00000002414	ENSPSIG00000002417	ENSPSIG00000002464	ENSPSIG00000002466
Chinese turtle	MODERN SPECIES	173				ENSPSIG00000002466	ENSPSIG00000002464	ENSPSIG00000002417	ENSPSIG00000002414	RNF121 (ENSPSIG00000002388)	NUMA1 (ENSPSIG00000002377)	LRRC51 (ENSPSIG00000002362)	LAMTOR1 (ENSPSIG00000002359)	ENSPSIG00000002356	TOMT (ENSPSIG00000002345)	ENSPSIG00000002332 #22	ENSPSIG00000002326 #22	ENSPSIG00000002325 #22	INPPL1 (ENSPSIG00000002289)	PHOX2A (ENSPSIG00000002287)	CLPB (ENSPSIG00000002250)
Chinese turtle	MODERN SPECIES	173						ENSPSIG00000002466	ENSPSIG00000002464	ENSPSIG00000002417	ENSPSIG00000002414	RNF121 (ENSPSIG00000002388)	NUMA1 (ENSPSIG00000002377)	LRRC51 (ENSPSIG00000002362)	LAMTOR1 (ENSPSIG00000002359)	ENSPSIG00000002356	TOMT (ENSPSIG00000002345)	ENSPSIG00000002332 #22	ENSPSIG00000002326 #22	ENSPSIG00000002325 #22	INPPL1 (ENSPSIG00000002289)	PHOX2A (ENSPSIG00000002287)	CLPB (ENSPSIG00000002250)
Testudinoidea	DUPLICATION
Testudinoidea	ANCESTRAL SPECIES	24	ENSGT01030000234601.c.b.a.f.a	ENSGT01030000234601.c.b.a.f.b.d	ENSGT01030000234601.c.b.a.f.b.c.a.b	ENSGT01030000234601.c.b.a.e	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00960000190355	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.g #22	ENSGT00950000183144.A.h #22	ENSGT00940000156576	ENSGT00940000166245	ENSGT01030000234621.C.a.a.a	ENSGT01030000234582.f.a.a	ENSGT00390000002414	ENSGT00940000165703	ENSGT00940000164773	ENSGT00730000111220	ENSGT00940000161362	ENSGT00940000160128	ENSGT00940000167491	ENSGT00950000183061.a.a.a.a.b	ENSGT00940000153168.A	ENSGT00940000160157
Emydidae	ANCESTRAL SPECIES	32	ENSGT01030000234601.c.b.a.f.a	ENSGT01030000234601.c.b.a.f.b.d	ENSGT01030000234601.c.b.a.f.b.c.a.b	ENSGT01030000234601.c.b.a.e	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00940000167530	ENSGT00960000190355	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.g #22	ENSGT00950000183144.A.h #22	ENSGT00940000156576	ENSGT01030000234621.C.a.a.a	ENSGT01030000234582.f.a.a	ENSGT00390000002414	ENSGT00940000165703	ENSGT00940000164773	ENSGT00730000111220	ENSGT00940000161362	ENSGT00940000160128	ENSGT00940000167491	ENSGT00950000183061.a.a.a.a.b	ENSGT00940000153168.A	ENSGT00940000160157	ENSGT00940000155516
painted turtle	MODERN SPECIES	815	ENSCPBG00000003300	ENSCPBG00000003308	ENSCPBG00000003316	ENSCPBG00000003323	ENSCPBG00000003332	ENSCPBG00000003338	ENSCPBG00000003438	ENSCPBG00000003953	RNF121 (ENSCPBG00000003965)	NUMA1 (ENSCPBG00000004015)	LRRC51 (ENSCPBG00000004082)	ENSCPBG00000004090	ENSCPBG00000004095	TOMT (ENSCPBG00000004102)	ANAPC15 (ENSCPBG00000004116)	ENSCPBG00000004133 #22	ENSCPBG00000004163 #22	ENSCPBG00000004257 #22	INPPL1 (ENSCPBG00000004673)	PHOX2A (ENSCPBG00000004888)	CLPB (ENSCPBG00000004900)	STARD10 (ENSCPBG00000004929)	ARAP1 (ENSCPBG00000004942)	PDE2A (ENSCPBG00000004977)	ATG16L2 (ENSCPBG00000004996)	ENSCPBG00000005018	WDR73 (ENSCPBG00000005051)
Three-toed box turtle	MODERN SPECIES	2302																ENSTMTG00000013944 #22	ENSTMTG00000013938 #22
Testudinidae	ANCESTRAL SPECIES		ENSGT01030000234601.c.b.a.f.b.c.b	ENSGT01030000234601.c.b.a.f.b.c.a.a	ENSGT01030000234601.c.b.a.f.a	ENSGT01030000234601.c.b.a.f.b.d	ENSGT01030000234601.c.b.a.f.b.c.a.b	ENSGT01030000234601.c.b.a.e	ENSGT01060000248588.b	ENSGT00940000169757	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A.g #22	ENSGT00950000183144.A.h #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000153936.b	ENSGT00950000182887.C.a.b	ENSGT00390000015701	ENSGT00940000162049.b	ENSGT00940000162049.a	ENSGT01080000257336.a.c.a	ENSGT00940000154868.b	ENSGT00940000158353.a
Goode s thornscrub tortoise	MODERN SPECIES		ENSGEVG00005000947	ART1 (ENSGEVG00005000962)	ART5 (ENSGEVG00005000986)	ENSGEVG00005001000	ENSGEVG00005001012	ENSGEVG00005001039	ENSGEVG00005001056	ENSGEVG00005001224	RNF121 (ENSGEVG00005001565)	NUMA1 (ENSGEVG00005001607)	LRRC51 (ENSGEVG00005001643)	LAMTOR1 (ENSGEVG00005001660)	ENSGEVG00005001675	TOMT (ENSGEVG00005001760)	ANAPC15 (ENSGEVG00005001783)	ENSGEVG00005001793 #22	ENSGEVG00005001804 #22	ENSGEVG00005001814 #22	INPPL1 (ENSGEVG00005001985)	PHOX2A (ENSGEVG00005002492)	CLPB (ENSGEVG00005002515)	STARD10 (ENSGEVG00005002578)	ARAP1 (ENSGEVG00005002609)	ENSGEVG00005002686	ENSGEVG00005002695	PDE2A (ENSGEVG00005002718)	ATG16L2 (ENSGEVG00005002742)	ARRB1 (ENSGEVG00005002777)	WDR73 (ENSGEVG00005002815)	ENSGEVG00005002824	ENSGEVG00005002835
Abingdon island giant tortoise	MODERN SPECIES	108	ENSCABG00000018423	ENSCABG00000018422	ENSCABG00000018420	ENSCABG00000018419	ENSCABG00000018417	ENSCABG00000018416	ENSCABG00000018412	ENSCABG00000018405	RNF121 (ENSCABG00000018403)	NUMA1 (ENSCABG00000018394)	LRRC51 (ENSCABG00000018379)	LAMTOR1 (ENSCABG00000018374)	ENSCABG00000018371	TOMT (ENSCABG00000018361)	ANAPC15 (ENSCABG00000018359)	ENSCABG00000018356 #22	ENSCABG00000018353 #22	ENSCABG00000018351	INPPL1 (ENSCABG00000018350)	ENSCABG00000018349	CLPB (ENSCABG00000018002)	STARD10 (ENSCABG00000017999)	ARAP1 (ENSCABG00000017997)	PDE2A (ENSCABG00000017992)	ATG16L2 (ENSCABG00000017990)	PPP1R14C (ENSCABG00000017989)	LRP11 (ENSCABG00000017986)
Testudinoidea	ANCESTRAL SPECIES	24	ENSGT00940000155516	ENSGT00940000160157	ENSGT00940000153168.A	ENSGT00950000183061.a.a.a.a.b	ENSGT00940000167491	ENSGT00940000160128	ENSGT00940000161362	ENSGT00730000111220	ENSGT00940000164773	ENSGT00940000165703	ENSGT00390000002414	ENSGT01030000234582.f.a.a	ENSGT01030000234621.C.a.a.a	ENSGT00940000166245	ENSGT00940000156576	ENSGT00950000183144.A.h #22	ENSGT00950000183144.A.g #22	ENSGT00390000000938	ENSGT00940000161220	ENSGT00940000156432.b	ENSGT00390000016789	ENSGT00960000190355	ENSGT00940000167530	ENSGT00510000047925	ENSGT00950000183078.b.a.a	ENSGT00390000013075.a	ENSGT00940000169757	ENSGT01060000248588.b	ENSGT01030000234601.c.b.a.e	ENSGT01030000234601.c.b.a.f.b.c.a.b	ENSGT01030000234601.c.b.a.f.b.d
Emydidae	ANCESTRAL SPECIES	32	ENSGT00940000153259.a.a.a	ENSGT00940000155516	ENSGT00940000160157	ENSGT00940000153168.A	ENSGT00950000183061.a.a.a.a.b	ENSGT00940000167491	ENSGT00940000160128	ENSGT00940000161362	ENSGT00730000111220	ENSGT00940000164773	ENSGT00940000165703	ENSGT00390000002414	ENSGT01030000234582.f.a.a	ENSGT01030000234621.C.a.a.a	ENSGT00940000156576	ENSGT00950000183144.A.h #22	ENSGT00950000183144.A.g #22	ENSGT00390000000938	ENSGT00940000161220	ENSGT00940000156432.b	ENSGT00390000016789	ENSGT00960000190355	ENSGT00940000167530	ENSGT00510000047925	ENSGT00950000183078.b.a.a	ENSGT00390000013075.a	ENSGT00940000169757	ENSGT01060000248588.b	ENSGT01030000234601.c.b.a.e	ENSGT01030000234601.c.b.a.f.b.c.a.b	ENSGT01030000234601.c.b.a.f.b.d
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	815						WDR73 (ENSCPBG00000005051)	ENSCPBG00000005018	ATG16L2 (ENSCPBG00000004996)	PDE2A (ENSCPBG00000004977)	ARAP1 (ENSCPBG00000004942)	STARD10 (ENSCPBG00000004929)	CLPB (ENSCPBG00000004900)	PHOX2A (ENSCPBG00000004888)	INPPL1 (ENSCPBG00000004673)	ENSCPBG00000004257 #22	ENSCPBG00000004163 #22	ENSCPBG00000004133 #22	ANAPC15 (ENSCPBG00000004116)	TOMT (ENSCPBG00000004102)	ENSCPBG00000004095	ENSCPBG00000004090	LRRC51 (ENSCPBG00000004082)	NUMA1 (ENSCPBG00000004015)	RNF121 (ENSCPBG00000003965)	ENSCPBG00000003953	ENSCPBG00000003438	ENSCPBG00000003338	ENSCPBG00000003332	ENSCPBG00000003323	ENSCPBG00000003316	ENSCPBG00000003308
painted turtle	MODERN SPECIES	815	ENSCPBG00000003316	ENSCPBG00000003323	ENSCPBG00000003332	ENSCPBG00000003338	ENSCPBG00000003438	ENSCPBG00000003953	RNF121 (ENSCPBG00000003965)	NUMA1 (ENSCPBG00000004015)	LRRC51 (ENSCPBG00000004082)	ENSCPBG00000004090	ENSCPBG00000004095	TOMT (ENSCPBG00000004102)	ANAPC15 (ENSCPBG00000004116)	ENSCPBG00000004133 #22	ENSCPBG00000004163 #22	ENSCPBG00000004257 #22	INPPL1 (ENSCPBG00000004673)	PHOX2A (ENSCPBG00000004888)	CLPB (ENSCPBG00000004900)	STARD10 (ENSCPBG00000004929)	ARAP1 (ENSCPBG00000004942)	PDE2A (ENSCPBG00000004977)	ATG16L2 (ENSCPBG00000004996)	ENSCPBG00000005018	WDR73 (ENSCPBG00000005051)
Three-toed box turtle	DUPLICATION
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	2264																ENSTMTG00000010373 #22
Three-toed box turtle	MODERN SPECIES	1743																ENSTMTG00000017438 #22
Three-toed box turtle	MODERN SPECIES	2302																ENSTMTG00000013938 #22	ENSTMTG00000013944 #22
Testudinidae	ANCESTRAL SPECIES		ENSGT00940000155001.B.c	ENSGT00940000158353.a	ENSGT00940000154868.b	ENSGT01080000257336.a.c.a	ENSGT00940000162049.a	ENSGT00940000162049.b	ENSGT00390000015701	ENSGT00950000182887.C.a.b	ENSGT00940000153936.b	ENSGT00940000159817	ENSGT00940000157424	ENSGT00510000047611	ENSGT00390000012961	ENSGT00940000161147	ENSGT00940000156576	ENSGT00950000183144.A.h #22	ENSGT00950000183144.A.g #22	ENSGT00390000000938	ENSGT00940000161220	ENSGT00940000156432.b	ENSGT00390000016789	ENSGT00510000047925	ENSGT00950000183078.b.a.a	ENSGT00390000013075.a	ENSGT00940000169757	ENSGT01060000248588.b	ENSGT01030000234601.c.b.a.e	ENSGT01030000234601.c.b.a.f.b.c.a.b	ENSGT01030000234601.c.b.a.f.b.d	ENSGT01030000234601.c.b.a.f.a	ENSGT01030000234601.c.b.a.f.b.c.a.a
Goode s thornscrub tortoise	DUPLICATION
Goode s thornscrub tortoise	MODERN SPECIES		ART5 (ENSGEVG00005000986)	ENSGEVG00005001000	ENSGEVG00005001012	ENSGEVG00005001039	ENSGEVG00005001056	ENSGEVG00005001224	RNF121 (ENSGEVG00005001565)	NUMA1 (ENSGEVG00005001607)	LRRC51 (ENSGEVG00005001643)	LAMTOR1 (ENSGEVG00005001660)	ENSGEVG00005001675	TOMT (ENSGEVG00005001760)	ANAPC15 (ENSGEVG00005001783)	ENSGEVG00005001793 #22	ENSGEVG00005001804 #22	ENSGEVG00005001814 #22	INPPL1 (ENSGEVG00005001985)	PHOX2A (ENSGEVG00005002492)	CLPB (ENSGEVG00005002515)	STARD10 (ENSGEVG00005002578)	ARAP1 (ENSGEVG00005002609)	ENSGEVG00005002686	ENSGEVG00005002695	PDE2A (ENSGEVG00005002718)	ATG16L2 (ENSGEVG00005002742)	ARRB1 (ENSGEVG00005002777)	WDR73 (ENSGEVG00005002815)	ENSGEVG00005002824	ENSGEVG00005002835	SLCO2B1 (ENSGEVG00005002871)	ENSGEVG00005003019
Goode s thornscrub tortoise	MODERN SPECIES		SLCO2B1 (ENSGEVG00005002871)	ENSGEVG00005002835	ENSGEVG00005002824	WDR73 (ENSGEVG00005002815)	ARRB1 (ENSGEVG00005002777)	ATG16L2 (ENSGEVG00005002742)	PDE2A (ENSGEVG00005002718)	ENSGEVG00005002695	ENSGEVG00005002686	ARAP1 (ENSGEVG00005002609)	STARD10 (ENSGEVG00005002578)	CLPB (ENSGEVG00005002515)	PHOX2A (ENSGEVG00005002492)	INPPL1 (ENSGEVG00005001985)	ENSGEVG00005001814 #22	ENSGEVG00005001804 #22	ENSGEVG00005001793 #22	ANAPC15 (ENSGEVG00005001783)	TOMT (ENSGEVG00005001760)	ENSGEVG00005001675	LAMTOR1 (ENSGEVG00005001660)	LRRC51 (ENSGEVG00005001643)	NUMA1 (ENSGEVG00005001607)	RNF121 (ENSGEVG00005001565)	ENSGEVG00005001224	ENSGEVG00005001056	ENSGEVG00005001039	ENSGEVG00005001012	ENSGEVG00005001000	ART5 (ENSGEVG00005000986)	ART1 (ENSGEVG00005000962)
Abingdon island giant tortoise	MODERN SPECIES	108						LRP11 (ENSCABG00000017986)	PPP1R14C (ENSCABG00000017989)	ATG16L2 (ENSCABG00000017990)	PDE2A (ENSCABG00000017992)	ARAP1 (ENSCABG00000017997)	STARD10 (ENSCABG00000017999)	CLPB (ENSCABG00000018002)	ENSCABG00000018349	INPPL1 (ENSCABG00000018350)	ENSCABG00000018351	ENSCABG00000018353 #22	ENSCABG00000018356 #22	ANAPC15 (ENSCABG00000018359)	TOMT (ENSCABG00000018361)	ENSCABG00000018371	LAMTOR1 (ENSCABG00000018374)	LRRC51 (ENSCABG00000018379)	NUMA1 (ENSCABG00000018394)	RNF121 (ENSCABG00000018403)	ENSCABG00000018405	ENSCABG00000018412	ENSCABG00000018416	ENSCABG00000018417	ENSCABG00000018419	ENSCABG00000018420	ENSCABG00000018422
Anura	ANCESTRAL SPECIES	151								ENSGT00390000017353	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000157424	ENSGT01030000234621.C.a.a.a	ENSGT01030000234582.f.a.a	ENSGT00390000002414	ENSGT00940000165703	ENSGT00530000063624.B	ENSGT00940000157843	ENSGT00950000183118.A.c.b.r	ENSGT00940000156656	ENSGT00940000156837	ENSGT00510000047029	ENSGT00950000182963.b.b
Leishan spiny toad	MODERN SPECIES	1260														TOMT (ENSLLEG00000018319)	ENSLLEG00000018404	ENSLLEG00000018440 #22
Frog	MODERN SPECIES	2	XB5799088 [provisional:art5] (ENSXETG00000031855)	ENSXETG00000033199	ENSXETG00000004212	ENSXETG00000004239	ENSXETG00000004266	gigyf1 (ENSXETG00000003319)	ENSXETG00000004257	ENSXETG00000036722	lrif1 (ENSXETG00000032187)	ENSXETG00000004224	xndc1 (ENSXETG00000036972)	numa1 (ENSXETG00000036258)	ENSXETG00000043095	lamtor1 (ENSXETG00000046758)	sfrpx (ENSXETG00000045448)	folr1 (ENSXETG00000044118) #22	inppl1 (ENSXETG00000035315)	phox2a (ENSXETG00000049171)	clpb (ENSXETG00000010507)	lrtomt (ENSXETG00000044749)	znf674 (ENSXETG00000010512)	ENSXETG00000042493	ENSXETG00000048265	fhip1b (ENSXETG00000010517)	trim39l.1 (ENSXETG00000048760)	cnga4 (ENSXETG00000010525)	ENSXETG00000041415	art5 (ENSXETG00000010526)	ENSXETG00000041420	XB5918646 [provisional] (ENSXETG00000048232)	ENSXETG00000045100
Coelacanth	MODERN SPECIES	1983																folr (ENSLACG00000000045) #22	INPPL1 (ENSLACG00000004991)	ENSLACG00000005287	PHOX2A (ENSLACG00000007475)	CLPB (ENSLACG00000008436)
Actinopterygii	ANCESTRAL SPECIES	187	ENSGT00550000074799	ENSGT00510000047299	ENSGT00940000155158	ENSGT00390000000214.a.a	ENSGT00940000165269	ENSGT00910000144246	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00510000047611
Reedfish	MODERN SPECIES	12	ENSECRG00000004665	stim1b (ENSECRG00000004686)	slc6a7 (ENSECRG00000004718)	ENSECRG00000004737	rrm1 (ENSECRG00000004753)	ENSECRG00000004773	ENSECRG00000004803	rnf121 (ENSECRG00000004839)	ENSECRG00000004854	ENSECRG00000004867	LRRC51 (ENSECRG00000004873)	lamtor1 (ENSECRG00000004878)	ENSECRG00000004886	tomt (ENSECRG00000004891)	anapc15 (ENSECRG00000004898)	folr (ENSECRG00000004902) #22	inppl1a (ENSECRG00000004919)	phox2a (ENSECRG00000004940)	CLPB (ENSECRG00000004952)	stard10 (ENSECRG00000004961)	ARAP1 (ENSECRG00000004972)	PDE2A (ENSECRG00000004997)	ENSECRG00000005017	ENSECRG00000005027	arrb1 (ENSECRG00000005035)	ENSECRG00000005050	ENSECRG00000005063	ENSECRG00000005070	ENSECRG00000005079	ENSECRG00000005086	ENSECRG00000005093
Neopterygii	ANCESTRAL SPECIES	52	ENSGT00550000074799	ENSGT00510000047299	ENSGT00940000155158	ENSGT00390000000214.a.a	ENSGT00940000165269	ENSGT00910000144246	ENSGT01060000248588.b	ENSGT00390000004140.b	ENSGT00390000013075.a	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692	ENSGT00940000159817	ENSGT00940000153669.a	ENSGT00530000063695.a	ENSGT00940000159074	ENSGT00950000183168.D	ENSGT00390000012084	ENSGT00940000160158	ENSGT00940000162506 #27
Spotted gar	MODERN SPECIES	669	pgap2 (ENSLOCG00000008012)	rhoga (ENSLOCG00000018023)	stim1b (ENSLOCG00000007988)	slc6a7 (ENSLOCG00000007970)	ENSLOCG00000007962	rrm1 (ENSLOCG00000007941)	ENSLOCG00000007930	trpc2b (ENSLOCG00000007903)	rnf121 (ENSLOCG00000007891)	wu:fb44b02 (ENSLOCG00000007865)	LRRC51 (ENSLOCG00000007850)	lamtor1 (ENSLOCG00000007824)	ENSLOCG00000007815	tomt (ENSLOCG00000007792)	anapc15 (ENSLOCG00000007778)	folr (ENSLOCG00000007764) #22	inppl1a (ENSLOCG00000007744)	phox2a (ENSLOCG00000007728)	CLPB (ENSLOCG00000007715)	stard10 (ENSLOCG00000007700)	ARAP1 (ENSLOCG00000007666)	PDE2A (ENSLOCG00000007646)	mtmr2 (ENSLOCG00000007628)	cep57 (ENSLOCG00000007612)	fam76b (ENSLOCG00000007600)	sesn3 (ENSLOCG00000007583)	cwc15 (ENSLOCG00000007570)	AMOTL1 (ENSLOCG00000007548)	FUT4 (ENSLOCG00000018021) #27	ankrd49 (ENSLOCG00000007534) #25	mre11a (ENSLOCG00000007516) #24
Osteoglossocephalai	ANCESTRAL SPECIES	12	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174 #9	ENSGT00940000154981.bb.b #10	ENSGT00940000166267.b	ENSGT00940000166338	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692	ENSGT00940000159817	ENSGT00940000153669.a	ENSGT00530000063695.a	ENSGT00940000159074.e.a	ENSGT00940000160158	ENSGT00940000162506 #27	ENSGT00390000003919 #25	ENSGT00390000017288 #24
Osteoglossiformes	ANCESTRAL SPECIES	14	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000167196	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.eb #9	ENSGT00940000166338	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692	ENSGT00940000159817	ENSGT00940000153669.a	ENSGT00530000063695.a	ENSGT00940000159074.e.a.a	ENSGT00950000183168.D	ENSGT00940000160158	ENSGT00940000162506 #27	ENSGT00390000003919 #25	ENSGT00390000017288 #24
Asian bonytongue	MODERN SPECIES	1	ENSSFOG00015016669	fzd4 (ENSSFOG00015016654)	RAB38 (ENSSFOG00015032955)	ctsc (ENSSFOG00015031421)	grm5b (ENSSFOG00015016586)	tyr (ENSSFOG00015016560)	ENSSFOG00015016496	naalad2 (ENSSFOG00015016458) #8	CHORDC1 (ENSSFOG00015016409) #9	NUMA1 (ENSSFOG00015016370)	lrrc51 (ENSSFOG00015030124)	lamtor1 (ENSSFOG00015032080)	ENSSFOG00015026836	tomt (ENSSFOG00015016320)	anapc15 (ENSSFOG00015033360)	folr (ENSSFOG00015016286) #22	inppl1a (ENSSFOG00015016243)	phox2a (ENSSFOG00015026369)	CLPB (ENSSFOG00015016160)	stard10 (ENSSFOG00015024322)	ARAP1 (ENSSFOG00015016004)	PDE2A (ENSSFOG00015025589)	mtmr2 (ENSSFOG00015015953)	cep57 (ENSSFOG00015015937)	fam76b (ENSSFOG00015028364)	sesn3 (ENSSFOG00015025832)	ENSSFOG00015015880	AMOTL1 (ENSSFOG00015015786)	FUT4 (ENSSFOG00015033363) #27	ankrd49 (ENSSFOG00015025398) #25	mre11a (ENSSFOG00015015723) #24
P. kingsleyae	MODERN SPECIES	46	fzd4 (ENSPKIG00000023363)	RAB38 (ENSPKIG00000023351)	ctsc (ENSPKIG00000023330)	grm5b (ENSPKIG00000023293)	tyr (ENSPKIG00000023265)	naalad2 (ENSPKIG00000023233) #8	ENSPKIG00000023153	chordc1b (ENSPKIG00000023107) #9	ENSPKIG00000023088	ENSPKIG00000023065	lrrc51 (ENSPKIG00000023052)	lamtor1 (ENSPKIG00000023034)	ENSPKIG00000023020	tomt (ENSPKIG00000023006)	anapc15 (ENSPKIG00000022993)	folr (ENSPKIG00000022982) #22	inppl1a (ENSPKIG00000022920)	phox2a (ENSPKIG00000022891)	CLPB (ENSPKIG00000022857)	stard10 (ENSPKIG00000022830)	ARAP1 (ENSPKIG00000022707)	ENSPKIG00000022651	ENSPKIG00000022639	ENSPKIG00000022627	ENSPKIG00000022614	mtmr2 (ENSPKIG00000022570)	cep57 (ENSPKIG00000022533)	fam76b (ENSPKIG00000022497)	sesn3 (ENSPKIG00000022463)	AMOTL1 (ENSPKIG00000022430)	FUT4 (ENSPKIG00000022413) #27
Clupeocephala	ANCESTRAL SPECIES	10	ENSGT00980000202145	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT00940000166338	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692	ENSGT00940000159817	ENSGT00530000063695.a	ENSGT00940000153669.a	ENSGT00940000159074.f	ENSGT00950000183168.D	ENSGT00390000012084
Euteleosteomorpha	ANCESTRAL SPECIES	158	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT00940000166338	ENSGT01100000263529.a.b	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000168882	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692.b	ENSGT00940000159817	ENSGT00530000063695.a	ENSGT00940000174790	ENSGT00390000017288 #24
Acanthomorphata	ANCESTRAL SPECIES	69	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT01100000263529.a.b	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692.a	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b
Euacanthomorphacea	ANCESTRAL SPECIES	8	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT01100000263529.a.b	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692.a	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b
Percomorphaceae	ANCESTRAL SPECIES	8	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT01100000263529.a.b	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692.a	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b
Tiger tail seahorse	MODERN SPECIES	345	PDGFD (ENSHCOG00000015191)	DYNC2H1 (ENSHCOG00000015174)	ENSHCOG00000015009	fzd4 (ENSHCOG00000014990)	RAB38 (ENSHCOG00000014973)	ctsc (ENSHCOG00000014852)	grm5b (ENSHCOG00000014839)	tyr (ENSHCOG00000014801)	NOX4 (ENSHCOG00000014787)	naalad2 (ENSHCOG00000014743) #8	lamtor1 (ENSHCOG00000014577)	ENSHCOG00000014560	ENSHCOG00000014546	tomt (ENSHCOG00000014541)	anapc15 (ENSHCOG00000014533)	folr (ENSHCOG00000014475) #22	inppl1a (ENSHCOG00000014440)	phox2a (ENSHCOG00000014102)	CLPB (ENSHCOG00000014092)	stard10 (ENSHCOG00000014081)	ARAP1 (ENSHCOG00000014044)	ENSHCOG00000013986	ENSHCOG00000013981	ENSHCOG00000013967	cul3a (ENSHCOG00000013949)	ENSHCOG00000013897	MMP28 (ENSHCOG00000013878)	ENSHCOG00000013873	porb (ENSHCOG00000013841)	tmem120ab (ENSHCOG00000013795)	gdpd1 (ENSHCOG00000013756)
Percomorphaceae_B	ANCESTRAL SPECIES	13	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692.a	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b
Percomorphaceae_C	ANCESTRAL SPECIES	9	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Percomorphaceae_D	ANCESTRAL SPECIES	9	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00950000183078.b.a.a	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Carangaria	ANCESTRAL SPECIES	8	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Pleuronectoidei	ANCESTRAL SPECIES	13	ENSGT00530000067879	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000167196	ENSGT01030000234598.b.a.b #8	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Turbot	MODERN SPECIES	15	ENSSMAG00000019220	ENSSMAG00000019226	RAB38 (ENSSMAG00000019236)	ctsc (ENSSMAG00000019244)	grm5b (ENSSMAG00000019258)	tyr (ENSSMAG00000019336)	ENSSMAG00000019367	naalad2 (ENSSMAG00000019448) #8	ENSSMAG00000019471	ENSSMAG00000019481	lrrc51 (ENSSMAG00000030122)	lamtor1 (ENSSMAG00000026615)	ENSSMAG00000019546	TOMT (ENSSMAG00000019555)	ANAPC15 (ENSSMAG00000019561)	FOLR3 (ENSSMAG00000019568) #22	inppl1a (ENSSMAG00000019580)	PHOX2A (ENSSMAG00000019665)	CLPB (ENSSMAG00000019669)	STARD10 (ENSSMAG00000019680)	ENSSMAG00000019689	PDE2A (ENSSMAG00000019767)	ENSSMAG00000019831	ENSSMAG00000035799	ENSSMAG00000019866	ENSSMAG00000019884	ENSSMAG00000019924	ENSSMAG00000019961	ENSSMAG00000035831	ENSSMAG00000032784	ENSSMAG00000022958
Tongue sole	MODERN SPECIES	14	DYNC2H1 (ENSCSEG00000018584)	ENSCSEG00000018672	fzd4 (ENSCSEG00000018675)	ctsc (ENSCSEG00000018687)	grm5b (ENSCSEG00000018704)	tyr (ENSCSEG00000018726)	ENSCSEG00000018844	naalad2 (ENSCSEG00000018897) #8	ENSCSEG00000018921	ENSCSEG00000018933	lrrc51 (ENSCSEG00000018959)	lamtor1 (ENSCSEG00000018964)	ENSCSEG00000018967	tomt (ENSCSEG00000018970)	anapc15 (ENSCSEG00000018973)	folr (ENSCSEG00000018981) #22	inppl1a (ENSCSEG00000018990)	phox2a (ENSCSEG00000019016)	CLPB (ENSCSEG00000019021)	stard10 (ENSCSEG00000019039)	ARAP1 (ENSCSEG00000019052)	ENSCSEG00000019082	ENSCSEG00000019089	cul3a (ENSCSEG00000019098)	ENSCSEG00000019135	MMP28 (ENSCSEG00000019144)	taf15 (ENSCSEG00000019154)	porb (ENSCSEG00000019170)	tmem120ab (ENSCSEG00000019188)	gdpd1 (ENSCSEG00000019216)	ENSCSEG00000019225
Carangaria_A	ANCESTRAL SPECIES	10	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00950000183078.b.a.a	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Seriola	ANCESTRAL SPECIES	50	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000167196	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00950000183078.b.a.a	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d	ENSGT00390000002172.A.a.f
Greater amberjack	MODERN SPECIES	54	fzd4 (ENSSDUG00000001085)	RAB38 (ENSSDUG00000001077)	ctsc (ENSSDUG00000001041)	grm5b (ENSSDUG00000000971)	tyr (ENSSDUG00000000940)	ENSSDUG00000000879	naalad2 (ENSSDUG00000000768) #8	chordc1a (ENSSDUG00000000692) #9	ENSSDUG00000000683	ENSSDUG00000000661	lrrc51 (ENSSDUG00000000650)	lamtor1 (ENSSDUG00000000638)	ENSSDUG00000000632	tomt (ENSSDUG00000000620)	anapc15 (ENSSDUG00000000596)	folr (ENSSDUG00000000588) #22	inppl1a (ENSSDUG00000000456)	phox2a (ENSSDUG00000000415)	CLPB (ENSSDUG00000000380)	stard10 (ENSSDUG00000000352)	ARAP1 (ENSSDUG00000000326)	PDE2A (ENSSDUG00000000273)	cul3b (ENSSDUG00000000174)	ENSSDUG00000000132	MMP28 (ENSSDUG00000000115)	ENSSDUG00000000075	porb (ENSSDUG00000021305)	tmem120ab (ENSSDUG00000021093)	gdpd1 (ENSSDUG00000021048)	ENSSDUG00000021036	hip1 (ENSSDUG00000020986)
Yellowtail amberjack	MODERN SPECIES	2741	fzd4 (ENSSLDG00000021128)	RAB38 (ENSSLDG00000021121)	ctsc (ENSSLDG00000021097)	grm5b (ENSSLDG00000021052)	tyr (ENSSLDG00000021033)	ENSSLDG00000021003	naalad2 (ENSSLDG00000020972) #8	chordc1a (ENSSLDG00000020956) #9	ENSSLDG00000020936	ENSSLDG00000020906	lrrc51 (ENSSLDG00000020850)	lamtor1 (ENSSLDG00000020827)	ENSSLDG00000020817	tomt (ENSSLDG00000020804)	anapc15 (ENSSLDG00000020792)	folr (ENSSLDG00000020787) #22	inppl1a (ENSSLDG00000020696)	phox2a (ENSSLDG00000020662)	CLPB (ENSSLDG00000020646)	stard10 (ENSSLDG00000020632)	ARAP1 (ENSSLDG00000020430)	PDE2A (ENSSLDG00000020340)	cul3b (ENSSLDG00000020281)	ENSSLDG00000020263	MMP28 (ENSSLDG00000020244)	ENSSLDG00000020220	porb (ENSSLDG00000020150)	tmem120ab (ENSSLDG00000020128)	gdpd1 (ENSSLDG00000020095)	ENSSLDG00000020079
Barramundi perch	MODERN SPECIES	205	fzd4 (ENSLCAG00010021715)	RAB38 (ENSLCAG00010021710)	ctsc (ENSLCAG00010021706)	grm5b (ENSLCAG00010021672)	tyr (ENSLCAG00010021647)	NOX4 (ENSLCAG00010021616)	naalad2 (ENSLCAG00010021505) #8	chordc1a (ENSLCAG00010021455) #9	ENSLCAG00010021452	ENSLCAG00010021448	lrrc51 (ENSLCAG00010021444)	lamtor1 (ENSLCAG00010021443)	ENSLCAG00010021442	tomt (ENSLCAG00010021440)	anapc15 (ENSLCAG00010021435)	folr (ENSLCAG00010021431) #22	inppl1a (ENSLCAG00010021421)	phox2a (ENSLCAG00010021414)	CLPB (ENSLCAG00010021324)	stard10 (ENSLCAG00010021294)	ARAP1 (ENSLCAG00010021170)	PDE2A (ENSLCAG00010021119)	cul3b (ENSLCAG00010021008)	ENSLCAG00010020959	MMP28 (ENSLCAG00010020954)
Anabantaria	ANCESTRAL SPECIES	9	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00950000183078.b.a.a	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Zig-zag eel	MODERN SPECIES	4	ENSMAMG00000006713	ENSMAMG00000006693	RAB38 (ENSMAMG00000006682)	ctsc (ENSMAMG00000006634)	grm5b (ENSMAMG00000006586)	tyr (ENSMAMG00000006563)	NOX4 (ENSMAMG00000006542)	naalad2 (ENSMAMG00000006462) #8	ENSMAMG00000024322	ENSMAMG00000006425	lrrc51 (ENSMAMG00000025288)	lamtor1 (ENSMAMG00000026349)	ENSMAMG00000006384	TOMT (ENSMAMG00000006377)	ANAPC15 (ENSMAMG00000025907)	FOLR3 (ENSMAMG00000006353) #22	inppl1a (ENSMAMG00000006179)	PHOX2A (ENSMAMG00000006151)	CLPB (ENSMAMG00000006065)	STARD10 (ENSMAMG00000006028)	ENSMAMG00000005991	PDE2A (ENSMAMG00000005938)	ENSMAMG00000005885	ENSMAMG00000005855	ENSMAMG00000005845	taf15 (ENSMAMG00000005819)	porb (ENSMAMG00000005790)	tmem120ab (ENSMAMG00000005775)	gdpd1 (ENSMAMG00000005748)	ENSMAMG00000005728	hip1 (ENSMAMG00000005573)
Anabantoidei	ANCESTRAL SPECIES	14	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000167196	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00950000183078.b.a.a	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Climbing perch	MODERN SPECIES	4	grm5b (ENSATEG00000007055)	tyr (ENSATEG00000007018)	ENSATEG00000006930	naalad2 (ENSATEG00000006835) #8	ENSATEG00000006796 #9	ENSATEG00000006790	ENSATEG00000006745 #9	ENSATEG00000006713	ENSATEG00000006698	wu:fb44b02 (ENSATEG00000006669)	lrrc51 (ENSATEG00000006642)	lamtor1 (ENSATEG00000006622)	ENSATEG00000006615	TOMT (ENSATEG00000006587)	ANAPC15 (ENSATEG00000006568)	FOLR3 (ENSATEG00000006561) #22	inppl1a (ENSATEG00000006407)	PHOX2A (ENSATEG00000006385)	CLPB (ENSATEG00000006300)	STARD10 (ENSATEG00000006277)	ENSATEG00000006256	PDE2A (ENSATEG00000028427)	ENSATEG00000006122	ENSATEG00000029517	ENSATEG00000006101	taf15 (ENSATEG00000006084)	porb (ENSATEG00000006011)	tmem120ab (ENSATEG00000005963)	gdpd1 (ENSATEG00000005904)	ENSATEG00000027470	hip1 (ENSATEG00000005853)
Siamese fighting fish	MODERN SPECIES	4	ctsc (ENSBSLG00000015887)	grm5b (ENSBSLG00000015914)	tyr (ENSBSLG00000016234)	ENSBSLG00000016243	naalad2 (ENSBSLG00000016272) #8	ENSBSLG00000007817	ENSBSLG00000008091	ENSBSLG00000011364	ENSBSLG00000011369	wu:fb44b02 (ENSBSLG00000011384)	lrrc51 (ENSBSLG00000011403)	lamtor1 (ENSBSLG00000011409)	ENSBSLG00000011424	tomt (ENSBSLG00000011655)	anapc15 (ENSBSLG00000011832)	folr (ENSBSLG00000011866) #22	inppl1a (ENSBSLG00000012023)	phox2a (ENSBSLG00000013018)	CLPB (ENSBSLG00000013431)	stard10 (ENSBSLG00000014888)	ARAP1 (ENSBSLG00000014902)	PDE2A (ENSBSLG00000016792)	ENSBSLG00000017564	cul3b (ENSBSLG00000017580)	ENSBSLG00000017738	MMP28 (ENSBSLG00000017757)	taf15 (ENSBSLG00000017775)	porb (ENSBSLG00000017866)	tmem120ab (ENSBSLG00000019064)	gdpd1 (ENSBSLG00000019169)	ENSBSLG00000019267
Eupercaria	ANCESTRAL SPECIES	7	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Tetraodontidae	ANCESTRAL SPECIES	10	ENSGT00940000155677.a	ENSGT00940000159575	ENSGT00940000154620	ENSGT00940000157141	ENSGT00530000067879	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT00940000167196	ENSGT01030000234598.b.a.b.d #8	ENSGT00940000166338	ENSGT00390000016789	ENSGT00940000161220	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961
Fugu	MODERN SPECIES	2	ENSTRUG00000031824	PDGFD (ENSTRUG00000004007)	ENSTRUG00000023004	fzd4 (ENSTRUG00000006345)	ENSTRUG00000022837	RAB38 (ENSTRUG00000006585)	ctsc (ENSTRUG00000006734)	grm5b (ENSTRUG00000006938)	tyr (ENSTRUG00000007845)	NOX4 (ENSTRUG00000008102)	ENSTRUG00000030580	naalad2 (ENSTRUG00000008489) #8	ENSTRUG00000022827	tomt (ENSTRUG00000009353)	lamtor1 (ENSTRUG00000023989)	folr (ENSTRUG00000009430) #22	inppl1a (ENSTRUG00000009438)	phox2a (ENSTRUG00000009916)	CLPB (ENSTRUG00000009957)	ENSTRUG00000010035	sst1.1 (ENSTRUG00000010048)	ece2b (ENSTRUG00000010049)	eif4h (ENSTRUG00000010290)	ENSTRUG00000031938	rffl (ENSTRUG00000010440)	ENSTRUG00000029733	ENSTRUG00000028826	SCN4B (ENSTRUG00000001355)	ENSTRUG00000005322	ENSTRUG00000005267	SLITRK3 (ENSTRUG00000030858)
Tetraodon	MODERN SPECIES	26	PLPPR5 (ENSTNIG00000003367)	tyw3 (ENSTNIG00000003368)	ENSTNIG00000003369	ENSTNIG00000003370	ttpa (ENSTNIG00000003371)	ca8 (ENSTNIG00000003372)	bcar1 (ENSTNIG00000003373)	ENSTNIG00000003374	fermt3b (ENSTNIG00000003380)	trpt1 (ENSTNIG00000003381)	ZBTB3 (ENSTNIG00000003382)	rnaseh2c (ENSTNIG00000000431)	BSCL2 (ENSTNIG00000003383)	lamtor1 (ENSTNIG00000003386)	anapc15 (ENSTNIG00000003387)	folr (ENSTNIG00000003388) #22	dtd2 (ENSTNIG00000001436)	ENSTNIG00000003416	si:dkeyp-104h9.5 (ENSTNIG00000003417)	icmt (ENSTNIG00000003418)	ENSTNIG00000001191	ENSTNIG00000003419	fbxw2 (ENSTNIG00000003420)	fbxw2 (ENSTNIG00000003421)	ENSTNIG00000003422	ENSTNIG00000003425	arl4ca (ENSTNIG00000003426)	sh3bp4a (ENSTNIG00000003427)	timm29 (ENSTNIG00000000919)	yipf2 (ENSTNIG00000003430)	jph1b (ENSTNIG00000003444)
Eupecaria_A	ANCESTRAL SPECIES	9	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Ballan wrasse	MODERN SPECIES	170					tyr (ENSLBEG00000000057)	ENSLBEG00000000048	naalad2 (ENSLBEG00000027990) #8	ENSLBEG00000027958	ENSLBEG00000027945	ENSLBEG00000027923	lrrc51 (ENSLBEG00000027911)	lamtor1 (ENSLBEG00000027904)	ENSLBEG00000027892	tomt (ENSLBEG00000027883)	anapc15 (ENSLBEG00000027872)	folr (ENSLBEG00000027860) #22	inppl1a (ENSLBEG00000027829)	phox2a (ENSLBEG00000027812)	CLPB (ENSLBEG00000027793)	stard10 (ENSLBEG00000027764)	ARAP1 (ENSLBEG00000027711)	ENSLBEG00000027665	ENSLBEG00000027657	cul3b (ENSLBEG00000027634)	ENSLBEG00000027616	MMP28 (ENSLBEG00000027595)	ENSLBEG00000027571	porb (ENSLBEG00000027532)	tmem120ab (ENSLBEG00000027495)	gdpd1 (ENSLBEG00000027477)	ENSLBEG00000027458
Eupecaria_B	ANCESTRAL SPECIES	9	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Perciformes	ANCESTRAL SPECIES	10	ENSGT00530000067879	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Perciformes_a	ANCESTRAL SPECIES	9	ENSGT00530000067879	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d	ENSGT00390000002172.A.a.f
Pike perch	MODERN SPECIES	97							ENSSLUG00000006906	ENSSLUG00000006913	ENSSLUG00000006917	ENSSLUG00000006942	lrrc51 (ENSSLUG00000006983)	lamtor1 (ENSSLUG00000006989)	ENSSLUG00000006998	tomt (ENSSLUG00000007017)	anapc15 (ENSSLUG00000007121)	folr (ENSSLUG00000007130) #22	inppl1a (ENSSLUG00000007220)	phox2a (ENSSLUG00000009019)	CLPB (ENSSLUG00000009163)	stard10 (ENSSLUG00000011087)	ARAP1 (ENSSLUG00000011180)	cul3b (ENSSLUG00000014796)	ENSSLUG00000015217	MMP28 (ENSSLUG00000015222)	ENSSLUG00000015236	porb (ENSSLUG00000015322)	tmem120ab (ENSSLUG00000016132)	gdpd1 (ENSSLUG00000016160)	ENSSLUG00000016180	bcl7bb (ENSSLUG00000016182)	baz1b (ENSSLUG00000016192)
Channel bull blenny	MODERN SPECIES	4	ENSCGOG00000016985	fzd4 (ENSCGOG00000016983)	ENSCGOG00000016982	RAB38 (ENSCGOG00000016979)	ctsc (ENSCGOG00000016923)	grm5b (ENSCGOG00000016897)	tyr (ENSCGOG00000016888)	NOX4 (ENSCGOG00000016884)	naalad2 (ENSCGOG00000015723) #8	ENSCGOG00000015675	lrrc51 (ENSCGOG00000015672)	lamtor1 (ENSCGOG00000015668)	ENSCGOG00000015665	tomt (ENSCGOG00000015622)	anapc15 (ENSCGOG00000015599)	folr (ENSCGOG00000015593) #22	inppl1a (ENSCGOG00000014911)	phox2a (ENSCGOG00000014894)	CLPB (ENSCGOG00000013997)	stard10 (ENSCGOG00000013983)	ARAP1 (ENSCGOG00000012540)	cul3b (ENSCGOG00000011813)	ENSCGOG00000011794	MMP28 (ENSCGOG00000011793)	taf15 (ENSCGOG00000011786)	porb (ENSCGOG00000011551)	tmem120ab (ENSCGOG00000011529)	gdpd1 (ENSCGOG00000011502)	ENSCGOG00000011498	hip1 (ENSCGOG00000011017)	bcl7bb (ENSCGOG00000011004)
Cottioidei	ANCESTRAL SPECIES	4	ENSGT00530000067879	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Stickleback	MODERN SPECIES		fzd4 (ENSGACG00000008058)	RAB38 (ENSGACG00000008046)	ctsc (ENSGACG00000007985)	grm5b (ENSGACG00000007968)	tyr (ENSGACG00000007960)	NOX4 (ENSGACG00000007953)	naalad2 (ENSGACG00000007887) #8	ENSGACG00000007884	ENSGACG00000007877	ENSGACG00000007861	lrrc51 (ENSGACG00000007856)	lamtor1 (ENSGACG00000007841)	ENSGACG00000007837	tomt (ENSGACG00000007832)	anapc15 (ENSGACG00000007825)	folr (ENSGACG00000007809) #22	inppl1a (ENSGACG00000007795)	phox2a (ENSGACG00000007788)	CLPB (ENSGACG00000007783)	stard10 (ENSGACG00000007754)	ARAP1 (ENSGACG00000007728)	PDE2A (ENSGACG00000007721)	cul3b (ENSGACG00000007710)	FAM124B (ENSGACG00000007708)	MMP28 (ENSGACG00000007700)	porb (ENSGACG00000007695)	tmem120ab (ENSGACG00000007693)	gdpd1 (ENSGACG00000007672)	ENSGACG00000007670	hip1 (ENSGACG00000007649)	bcl7bb (ENSGACG00000007630)
Lumpfish	MODERN SPECIES	4	ENSCLMG00005006686	fzd4 (ENSCLMG00005006684)	RAB38 (ENSCLMG00005006675)	ctsc (ENSCLMG00005006673)	grm5b (ENSCLMG00005006663)	tyr (ENSCLMG00005006660)	ENSCLMG00005006657	naalad2 (ENSCLMG00005001781) #8	ENSCLMG00005001354	ENSCLMG00005015385	lrrc51 (ENSCLMG00005015373)	lamtor1 (ENSCLMG00005015370)	ENSCLMG00005015369	tomt (ENSCLMG00005015362)	anapc15 (ENSCLMG00005015360)	folr (ENSCLMG00005015357) #22	inppl1a (ENSCLMG00005015338)	phox2a (ENSCLMG00005015327)	CLPB (ENSCLMG00005014477)	stard10 (ENSCLMG00005014472)	ENSCLMG00005014471	ARAP1 (ENSCLMG00005012543)	cul3b (ENSCLMG00005011879)	FAM124B (ENSCLMG00005011869)	MMP28 (ENSCLMG00005011868)	taf15 (ENSCLMG00005011867)	porb (ENSCLMG00005009326)	tmem120ab (ENSCLMG00005009164)	gdpd1 (ENSCLMG00005009157)	ENSCLMG00005009156	hip1 (ENSCLMG00005009137)
Eupecaria_C	ANCESTRAL SPECIES	7	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000167196	ENSGT01030000234598.b.a.b #8	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Gilthead seabream	MODERN SPECIES	11	ENSSAUG00010007949	fzd4 (ENSSAUG00010007962)	RAB38 (ENSSAUG00010007963)	ctsc (ENSSAUG00010007964)	grm5b (ENSSAUG00010007984)	tyr (ENSSAUG00010010654)	ENSSAUG00010010656	naalad2 (ENSSAUG00010010665) #8	ENSSAUG00010010845	ENSSAUG00010010848	lrrc51 (ENSSAUG00010010850)	lamtor1 (ENSSAUG00010010852)	ENSSAUG00010010853	tomt (ENSSAUG00010010854)	anapc15 (ENSSAUG00010010864)	folr (ENSSAUG00010010866) #22	inppl1a (ENSSAUG00010010874)	phox2a (ENSSAUG00010011354)	CLPB (ENSSAUG00010011370)	stard10 (ENSSAUG00010012432)	ARAP1 (ENSSAUG00010012469)	PDE2A (ENSSAUG00010014024)	cul3b (ENSSAUG00010014703)	taf15 (ENSSAUG00010015246)	ENSSAUG00010015248	MMP28 (ENSSAUG00010015249)	porb (ENSSAUG00010015280)	tmem120ab (ENSSAUG00010017888)	gdpd1 (ENSSAUG00010018088)	ENSSAUG00010018093	hip1 (ENSSAUG00010018125)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	5	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000167196	ENSGT01030000234598.b.a.b #8	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Large yellow croaker	MODERN SPECIES	479	DYNC2H1 (ENSLCRG00005003982)	ENSLCRG00005004008	fzd4 (ENSLCRG00005004009)	RAB38 (ENSLCRG00005004010)	ctsc (ENSLCRG00005004011)	grm5b (ENSLCRG00005004019)	tyr (ENSLCRG00005004091)	ENSLCRG00005004096	naalad2 (ENSLCRG00005004105) #8	ENSLCRG00005004128	ENSLCRG00005004132	lrrc51 (ENSLCRG00005004142)	lamtor1 (ENSLCRG00005004143)	ENSLCRG00005004144	anapc15 (ENSLCRG00005004146)	folr (ENSLCRG00005004147) #22	inppl1a (ENSLCRG00005004177)	phox2a (ENSLCRG00005007767)	CLPB (ENSLCRG00005007781)	stard10 (ENSLCRG00005008672)	ARAP1 (ENSLCRG00005008684)	PDE2A (ENSLCRG00005008984)	cul3b (ENSLCRG00005009172)	ENSLCRG00005009210	MMP28 (ENSLCRG00005009211)	taf15 (ENSLCRG00005009212)	porb (ENSLCRG00005009255)	tmem120ab (ENSLCRG00005012882)	gdpd1 (ENSLCRG00005012926)	ENSLCRG00005012994	hip1 (ENSLCRG00005012999)
European seabass	MODERN SPECIES	3	ENSDLAG00005030448	ENSDLAG00005029202	RAB38 (ENSDLAG00005017739)	ctsc (ENSDLAG00005017730)	grm5b (ENSDLAG00005012505)	tyr (ENSDLAG00005012407)	ENSDLAG00005012279	naalad2 (ENSDLAG00005004271) #8	ENSDLAG00005004224	ENSDLAG00005012263	ENSDLAG00005012231	lrrc51 (ENSDLAG00005027669)	lamtor1 (ENSDLAG00005032867)	ENSDLAG00005012216	TOMT (ENSDLAG00005012209)	FOLR3 (ENSDLAG00005012198) #22	ANAPC15 (ENSDLAG00005034101)	inppl1a (ENSDLAG00005010945)	PHOX2A (ENSDLAG00005010889)	CLPB (ENSDLAG00005010031)	ENSDLAG00005029348	ENSDLAG00005032064	ENSDLAG00005027513	ENSDLAG00005007483	ENSDLAG00005007463	ENSDLAG00005007440	taf15 (ENSDLAG00005007422)	porb (ENSDLAG00005007045)	ENSDLAG00005006235	gdpd1 (ENSDLAG00005006089)	ENSDLAG00005006069
Ovalentaria	ANCESTRAL SPECIES	8	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692.a	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b
Ovalentaria_B	ANCESTRAL SPECIES	11	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692.a	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b
Cichlidae	ANCESTRAL SPECIES	25	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT00940000177108.a.b	ENSGT00940000177108.b	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692.a	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	22	ENSGT00940000159604	ENSGT00950000182928.A.a.a	ENSGT00940000157430.a.b.f	ENSGT00940000157855	ENSGT00390000001735	ENSGT00990000203761	ENSGT00940000165230.a	ENSGT00410000028333	ENSGT00940000162662.bb.a.a	ENSGT00940000177108.b	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000164472.a.b.a.b.a.a.a.b.a.b.a.a	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b
Nile tilapia	MODERN SPECIES	5	blmh (ENSONIG00000007986)	ENSONIG00000041660	ENSONIG00000040973	rap1gap2a (ENSONIG00000007992)	ENSONIG00000030515	ENSONIG00000041172	ENSONIG00000008000	ENSONIG00000030955	ENSONIG00000043143	ENSONIG00000016755	lrrc51 (ENSONIG00000034887)	lamtor1 (ENSONIG00000016754)	ENSONIG00000016751	tomt (ENSONIG00000016750)	anapc15 (ENSONIG00000016749)	folr (ENSONIG00000035656) #22	inppl1a (ENSONIG00000016738)	phox2a (ENSONIG00000027153)	CLPB (ENSONIG00000016731)	ENSONIG00000033427	stard10 (ENSONIG00000016728)	ARAP1 (ENSONIG00000016723)	PDE2A (ENSONIG00000016713)	ENSONIG00000043005	ENSONIG00000041571	cul3b (ENSONIG00000016708)	FAM124B (ENSONIG00000040230)	mmp28 (ENSONIG00000027558)	taf15 (ENSONIG00000016704)	porb (ENSONIG00000016702)	tmem120ab (ENSONIG00000016701)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	25	ENSGT00940000159604	ENSGT00950000182928.A.a.a	ENSGT00940000157430.a.b.f	ENSGT00940000157855	ENSGT00390000001735	ENSGT00990000203761	ENSGT00940000165230.a	ENSGT00410000028333	ENSGT00940000162662.bb.a.a.b.a.a	ENSGT00940000177108.b	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000164472.a.b.a.b.a.a.a.b.a.b.a.a	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b
Lyretail cichlid	MODERN SPECIES	357											ENSNBRG00000004920	lrrc51 (ENSNBRG00000004890)	lamtor1 (ENSNBRG00000004878)	ENSNBRG00000004862	anapc15 (ENSNBRG00000004842)	folr (ENSNBRG00000004782) #22	inppl1a (ENSNBRG00000004581)	phox2a (ENSNBRG00000004538)	CLPB (ENSNBRG00000004368)	stard10 (ENSNBRG00000004311)	ARAP1 (ENSNBRG00000004292)	ENSNBRG00000004280	ENSNBRG00000004257	ENSNBRG00000004238	ENSNBRG00000004216	MMP28 (ENSNBRG00000004177)	taf15 (ENSNBRG00000004162)	porb (ENSNBRG00000004129)	tmem120ab (ENSNBRG00000004068)	gdpd1 (ENSNBRG00000004031)	ENSNBRG00000003931
Haplochromini	ANCESTRAL SPECIES	33										ENSGT00940000177108.b	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000164472.a.b.a.b.a.a.a.b.a.b.a.a.a.a	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b
Burton s mouthbrooder	MODERN SPECIES	422											lamtor1 (ENSHBUG00000015579)	lrrc51 (ENSHBUG00000015584)	ENSHBUG00000015559	TOMT (ENSHBUG00000015555)	anapc15 (ENSHBUG00000015534)	folr (ENSHBUG00000015526) #22	inppl1a (ENSHBUG00000015510)	phox2a (ENSHBUG00000015461)	ENSHBUG00000015445	CLPB (ENSHBUG00000015426)	stard10 (ENSHBUG00000015384)	ARAP1 (ENSHBUG00000015338)	PDE2A (ENSHBUG00000015292)	cul3b (ENSHBUG00000015248)	ENSHBUG00000015193	MMP28 (ENSHBUG00000015182)	taf15 (ENSHBUG00000015178)	porb (ENSHBUG00000015158)	tmem120ab (ENSHBUG00000015031)	gdpd1 (ENSHBUG00000014971)	ENSHBUG00000014891
Haplochromini_A	ANCESTRAL SPECIES	20										ENSGT00940000177108.b	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000164472.a.b.a.b.a.a.a.b.a.b.a.a.a.a	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b
P. nyererei	MODERN SPECIES	480											lrrc51 (ENSPNYG00000013403)	lamtor1 (ENSPNYG00000013381)	ENSPNYG00000013355	tomt (ENSPNYG00000013342)	anapc15 (ENSPNYG00000013329)	folr (ENSPNYG00000013297) #22	inppl1a (ENSPNYG00000013271)	phox2a (ENSPNYG00000013252)	CLPB (ENSPNYG00000013200)	stard10 (ENSPNYG00000013164)	ENSPNYG00000013091	ENSPNYG00000013066	ENSPNYG00000013018	ENSPNYG00000012999	cul3b (ENSPNYG00000012946)	ENSPNYG00000012914	MMP28 (ENSPNYG00000012888)	taf15 (ENSPNYG00000012865)	porb (ENSPNYG00000012823)	tmem120ab (ENSPNYG00000012787)	gdpd1 (ENSPNYG00000012760)
Haplochromini_B	ANCESTRAL SPECIES	9	ENSGT00940000159604	ENSGT00950000182928.A.a.a	ENSGT00940000157430.a.b.f	ENSGT00940000157855	ENSGT00390000001735	ENSGT00990000203761	ENSGT00940000165230.a	ENSGT00410000028333	ENSGT00940000162662.bb.a.a.a.a	ENSGT00940000177108.b	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00940000164472.a.b.a.b.a.a.a.b.a.b.a.a.a.a.b	ENSGT00510000047611	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Zebra mbuna	MODERN SPECIES	1096	blmh (ENSMZEG00005006646)	ENSMZEG00005006671	rap1gap2a (ENSMZEG00005006701)	ENSMZEG00005006777	ENSMZEG00005006951	ENSMZEG00005007009	ENSMZEG00005007082	ENSMZEG00005007097	ENSMZEG00005007162	ENSMZEG00005007269	lrrc51 (ENSMZEG00005007403)	lamtor1 (ENSMZEG00005007448)	ENSMZEG00005007460	tomt (ENSMZEG00005007469)	anapc15 (ENSMZEG00005007484)	folr (ENSMZEG00005007500) #22	inppl1a (ENSMZEG00005007511)	phox2a (ENSMZEG00005007533)	CLPB (ENSMZEG00005007555)	ENSMZEG00005007565	stard10 (ENSMZEG00005007581)	ENSMZEG00005007615	PDE2A (ENSMZEG00005007725)	cul3b (ENSMZEG00005007773)	ENSMZEG00005007833	MMP28 (ENSMZEG00005007839)	taf15 (ENSMZEG00005007852)	porb (ENSMZEG00005007864)	ENSMZEG00005007889	tmem120ab (ENSMZEG00005007914)	gdpd1 (ENSMZEG00005007933)
Eastern happy	MODERN SPECIES	5	ENSACLG00000009250	rap1gap2a (ENSACLG00000009035)	ENSACLG00000008802	ENSACLG00000008797	ENSACLG00000008741	ENSACLG00000008681	ENSACLG00000008643	ENSACLG00000008584	ENSACLG00000008567	ENSACLG00000008564	lrrc51 (ENSACLG00000007885)	lamtor1 (ENSACLG00000007876)	ENSACLG00000007873	tomt (ENSACLG00000007870)	anapc15 (ENSACLG00000007860)	folr (ENSACLG00000007856) #22	inppl1a (ENSACLG00000007842)	phox2a (ENSACLG00000007830)	CLPB (ENSACLG00000007797)	stard10 (ENSACLG00000007776)	ARAP1 (ENSACLG00000007640)	ENSACLG00000007386	PDE2A (ENSACLG00000007327)	cul3b (ENSACLG00000007270)	ENSACLG00000007259	MMP28 (ENSACLG00000007234)	taf15 (ENSACLG00000007228)	porb (ENSACLG00000007192)	tmem120ab (ENSACLG00000007161)	gdpd1 (ENSACLG00000007141)	ENSACLG00000007132
Midas cichlid	MODERN SPECIES	1042				ENSACIG00000009261	ENSACIG00000009252	naalad2 (ENSACIG00000009207) #8	chordc1a (ENSACIG00000009150) #9	ENSACIG00000009141	ENSACIG00000009130	ENSACIG00000009120	lrrc51 (ENSACIG00000009095)	lamtor1 (ENSACIG00000009075)	ENSACIG00000009059	tomt (ENSACIG00000009045)	anapc15 (ENSACIG00000009028)	folr (ENSACIG00000008986) #22	inppl1a (ENSACIG00000008932)	phox2a (ENSACIG00000008915)	CLPB (ENSACIG00000008875)	stard10 (ENSACIG00000008850)	ARAP1 (ENSACIG00000008740)	ENSACIG00000008701	ENSACIG00000008696	ENSACIG00000008684	cul3b (ENSACIG00000008642)	ENSACIG00000008630	MMP28 (ENSACIG00000008613)	taf15 (ENSACIG00000008575)	porb (ENSACIG00000008544)	ENSACIG00000008539	tmem120ab (ENSACIG00000008517)
Pomacentridae	ANCESTRAL SPECIES	5	ENSGT00530000067879	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Pomacentridae_A	ANCESTRAL SPECIES	4	ENSGT00530000067879	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000159010.a	ENSGT00940000164942.b
Amphiprion	ANCESTRAL SPECIES	6	ENSGT00530000067879	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220.c	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000159010.a	ENSGT00940000164942.b
Clown anemonefish	MODERN SPECIES	170										ENSAOCG00000015749	lrrc51 (ENSAOCG00000015809)	lamtor1 (ENSAOCG00000015847)	ENSAOCG00000015864	tomt (ENSAOCG00000015885)	anapc15 (ENSAOCG00000015912)	folr (ENSAOCG00000015927) #22	inppl1a (ENSAOCG00000016059)	phox2a (ENSAOCG00000001105)
Orange clownfish	MODERN SPECIES	23	ENSAPEG00000016867	fzd4 (ENSAPEG00000016886)	RAB38 (ENSAPEG00000016912)	ctsc (ENSAPEG00000016927)	grm5b (ENSAPEG00000016973)	tyr (ENSAPEG00000017027)	ENSAPEG00000017063	naalad2 (ENSAPEG00000017110) #8	ENSAPEG00000017166	ENSAPEG00000017209	lrrc51 (ENSAPEG00000017266)	lamtor1 (ENSAPEG00000017322)	ENSAPEG00000017352	tomt (ENSAPEG00000017367)	anapc15 (ENSAPEG00000017391)	folr (ENSAPEG00000017419) #22	inppl1a (ENSAPEG00000017439)	phox2a (ENSAPEG00000017530)	CLPB (ENSAPEG00000017558)	stard10 (ENSAPEG00000017583)	ARAP1 (ENSAPEG00000017627)	PDE2A (ENSAPEG00000017810)	cul3b (ENSAPEG00000017938)	ENSAPEG00000017974	MMP28 (ENSAPEG00000017982)	taf15 (ENSAPEG00000018037)	porb (ENSAPEG00000018066)	tmem120ab (ENSAPEG00000018101)	gdpd1 (ENSAPEG00000018150)	ENSAPEG00000018190	hip1 (ENSAPEG00000018220)
Spiny chromis	MODERN SPECIES	396															anapc15 (ENSAPOG00000002205)	folr (ENSAPOG00000002212) #22	inppl1a (ENSAPOG00000002267)	phox2a (ENSAPOG00000002281)	CLPB (ENSAPOG00000002293)	stard10 (ENSAPOG00000002305)	ARAP1 (ENSAPOG00000002324)	PDE2A (ENSAPOG00000002356)
Bicolor damselfish	MODERN SPECIES	271	ENSSPAG00000020770	fzd4 (ENSSPAG00000020755)	RAB38 (ENSSPAG00000020749)	ctsc (ENSSPAG00000020724)	grm5b (ENSSPAG00000020680)	tyr (ENSSPAG00000020644)	ENSSPAG00000020580	naalad2 (ENSSPAG00000020506) #8	ENSSPAG00000020480	ENSSPAG00000020416	lrrc51 (ENSSPAG00000020376)	lamtor1 (ENSSPAG00000020362)	ENSSPAG00000020353	tomt (ENSSPAG00000020338)	anapc15 (ENSSPAG00000020323)	folr (ENSSPAG00000020314) #22	inppl1a (ENSSPAG00000020205)	phox2a (ENSSPAG00000020178)	CLPB (ENSSPAG00000020158)	stard10 (ENSSPAG00000020134)	ENSSPAG00000020124	ARAP1 (ENSSPAG00000020094)	ENSSPAG00000020069	ENSSPAG00000020053	cul3b (ENSSPAG00000020000)	ENSSPAG00000019986
Atherinomorphae	ANCESTRAL SPECIES	15	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000167196	ENSGT01030000234598.b.a.b #8	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576.j	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Oryzias	ANCESTRAL SPECIES	8	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000161632	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576.j	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Oryzias_a	ANCESTRAL SPECIES	8	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000161632	ENSGT01030000234598.b.a.b.h.b #8	ENSGT00940000159621	ENSGT01030000234598.b.a.b.h.a #8	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576.j	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Chinese medaka	MODERN SPECIES	725			fzd4 (ENSOSIG00000014488)	RAB38 (ENSOSIG00000014490)	ctsc (ENSOSIG00000014491)	grm5b (ENSOSIG00000014506)	anapc15 (ENSOSIG00000014779)	ENSOSIG00000014782	naalad2 (ENSOSIG00000014786) #8	ENSOSIG00000014830	ENSOSIG00000014836	lrrc51 (ENSOSIG00000014842)	lamtor1 (ENSOSIG00000014843)	ENSOSIG00000014844	tomt (ENSOSIG00000014845)	folr (ENSOSIG00000015009) #22	inppl1a (ENSOSIG00000015028)	phox2a (ENSOSIG00000015564)	CLPB (ENSOSIG00000015566)	stard10 (ENSOSIG00000015603)	ARAP1 (ENSOSIG00000015615)	PDE2A (ENSOSIG00000016180)	cul3b (ENSOSIG00000016188)	FAM124B (ENSOSIG00000016308)	MMP28 (ENSOSIG00000016313)	taf15 (ENSOSIG00000016318)	porb (ENSOSIG00000016330)	tmem120ab (ENSOSIG00000016687)	gdpd1 (ENSOSIG00000017264)	ENSOSIG00000017268	bcl7bb (ENSOSIG00000000701)
Japanese Medaka HdrR	MODERN SPECIES	4	ENSORLG00000010731	fzd4 (ENSORLG00000010775)	RAB38 (ENSORLG00000010789)	ctsc (ENSORLG00000010823)	grm5b (ENSORLG00000010875)	tyr (ENSORLG00000010905)	ENSORLG00000010998	naalad2 (ENSORLG00000011078) #8	ENSORLG00000011090	ENSORLG00000011120	lrrc51 (ENSORLG00000011128)	lamtor1 (ENSORLG00000023696)	ENSORLG00000011145	tomt (ENSORLG00000011168)	anapc15 (ENSORLG00000024422)	folr (ENSORLG00000011195) #22	inppl1a (ENSORLG00000011228)	phox2a (ENSORLG00000024115)	CLPB (ENSORLG00000011250)	stard10 (ENSORLG00000011266)	ARAP1 (ENSORLG00000011295)	ENSORLG00000028472	ENSORLG00000025156	cul3b (ENSORLG00000011336)	FAM124B (ENSORLG00000011343)	MMP28 (ENSORLG00000011349)	taf15 (ENSORLG00000011382)	POR (ENSORLG00000011398)	tmem120ab (ENSORLG00000011423)	gdpd1 (ENSORLG00000011464)	ENSORLG00000029645
Oryzias_b	ANCESTRAL SPECIES	14	ENSGT00530000067879	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000161632	ENSGT01030000234598.b.a.b #8	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576.j	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Indian medaka	MODERN SPECIES	12	ENSOMEG00000002585	fzd4 (ENSOMEG00000002595)	RAB38 (ENSOMEG00000000048)	ctsc (ENSOMEG00000002605)	grm5b (ENSOMEG00000002640)	tyr (ENSOMEG00000002663)	ENSOMEG00000002687	naalad2 (ENSOMEG00000001007) #8	ENSOMEG00000002717	ENSOMEG00000002736	lrrc51 (ENSOMEG00000002740)	lamtor1 (ENSOMEG00000002763)	ENSOMEG00000002771	tomt (ENSOMEG00000002778)	anapc15 (ENSOMEG00000002788)	folr (ENSOMEG00000002791) #22	inppl1a (ENSOMEG00000002830)	phox2a (ENSOMEG00000002844)	CLPB (ENSOMEG00000002901)	stard10 (ENSOMEG00000002936)	ARAP1 (ENSOMEG00000002959)	PDE2A (ENSOMEG00000002986)	cul3b (ENSOMEG00000003016)	ENSOMEG00000003035	MMP28 (ENSOMEG00000003055)	taf15 (ENSOMEG00000003065)	porb (ENSOMEG00000003101)	tmem120ab (ENSOMEG00000003125)	gdpd1 (ENSOMEG00000003147)	ENSOMEG00000003165	hip1 (ENSOMEG00000003233)
Javanese ricefish	MODERN SPECIES	4	ENSOJAG00000009084	fzd4 (ENSOJAG00000009071)	RAB38 (ENSOJAG00000009061)	ctsc (ENSOJAG00000008944)	grm5b (ENSOJAG00000008315)	tyr (ENSOJAG00000008238)	ENSOJAG00000008144	naalad2 (ENSOJAG00000006232) #8	ENSOJAG00000006052	ENSOJAG00000005955	lrrc51 (ENSOJAG00000021106)	lamtor1 (ENSOJAG00000021104)	ENSOJAG00000021099	tomt (ENSOJAG00000021096)	anapc15 (ENSOJAG00000021090)	folr (ENSOJAG00000021078) #22	inppl1a (ENSOJAG00000020585)	phox2a (ENSOJAG00000020529)	CLPB (ENSOJAG00000019374)	stard10 (ENSOJAG00000019265)	ARAP1 (ENSOJAG00000018885)	PDE2A (ENSOJAG00000018093)	cul3b (ENSOJAG00000017654)	FAM124B (ENSOJAG00000017620)	MMP28 (ENSOJAG00000017611)	ENSOJAG00000017598	POR (ENSOJAG00000017436)	tmem120ab (ENSOJAG00000017383)	gdpd1 (ENSOJAG00000017371)	ENSOJAG00000017361	hip1 (ENSOJAG00000017057)
Cyprinodontiformes	ANCESTRAL SPECIES	12	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000167196	ENSGT01030000234598.b.a.b #8	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576.j	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Aplocheiloidei	ANCESTRAL SPECIES	8	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000167196	ENSGT01030000234598.b.a.b #8	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00950000183078.b.a.a	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576.j	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Mangrove rivulus	MODERN SPECIES	75																folr (ENSKMAG00000001430) #22	inppl1a (ENSKMAG00000001455)	phox2a (ENSKMAG00000001592)	CLPB (ENSKMAG00000001615)	stard10 (ENSKMAG00000001623)	ARAP1 (ENSKMAG00000001659)	PDE2A (ENSKMAG00000001714)	cul3b (ENSKMAG00000001794)	ENSKMAG00000001887	MMP28 (ENSKMAG00000001896)	taf15 (ENSKMAG00000001916)	porb (ENSKMAG00000001985)	TMEM120A (ENSKMAG00000002081)	gdpd1 (ENSKMAG00000002144)	ENSKMAG00000002210	hip1 (ENSKMAG00000002247)
Turquoise killifish	MODERN SPECIES	1615	FZD4 (ENSNFUG00015003450)	RAB38 (ENSNFUG00015003454)	ctsc (ENSNFUG00015003458)	grm5b (ENSNFUG00015003499)	ENSNFUG00015003589	tyr (ENSNFUG00015003600)	NOX4 (ENSNFUG00015003612)	FOLH1 (ENSNFUG00015003697) #8	ENSNFUG00015003940	Nfu_g_1_000309 (ENSNFUG00015003947)	lrrc51 (ENSNFUG00015003952)	lamtor1 (ENSNFUG00015003958)	CABZ01110305.1 (ENSNFUG00015003962)	LRTOMT (ENSNFUG00015003971)	anapc15 (ENSNFUG00015003983)	folr (ENSNFUG00015003995) #22	INPPL1A (ENSNFUG00015004024)	phox2a (ENSNFUG00015004077)	CLPB (ENSNFUG00015004105)	PDE2A (ENSNFUG00015004164)	ENSNFUG00015004206	CUL3 (ENSNFUG00015004293)	FAM124B (ENSNFUG00015008044)	CU633910.1 (ENSNFUG00015008054)	taf15 (ENSNFUG00015008075)	POR (ENSNFUG00015008134)	tmem120ab (ENSNFUG00015008247)	GDPD1 (ENSNFUG00015008383)	YPEL2 (ENSNFUG00015008392)	HIP1 (ENSNFUG00015008481)	ENSNFUG00015008753
Cyprinodontoidei	ANCESTRAL SPECIES	9	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000167196	ENSGT01030000234598.b.a.b #8	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576.j	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Poeciliinae	ANCESTRAL SPECIES	14	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000167196	ENSGT01030000234598.b.a.b #8	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576.j	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Poecilia	ANCESTRAL SPECIES	2	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000167196	ENSGT01030000234598.b.a.b #8	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576.j	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
NAME_6	ANCESTRAL SPECIES	83	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000167196	ENSGT01030000234598.b.a.b #8	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576.j	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Amazon molly	MODERN SPECIES	405	ENSPFOG00000006584	fzd4 (ENSPFOG00000006607)	RAB38 (ENSPFOG00000006670)	ctsc (ENSPFOG00000006702)	grm5b (ENSPFOG00000006828)	tyr (ENSPFOG00000007303)	ENSPFOG00000007381	naalad2 (ENSPFOG00000007722) #8	ENSPFOG00000008103	ENSPFOG00000008141	lrrc51 (ENSPFOG00000008470)	lamtor1 (ENSPFOG00000008495)	ENSPFOG00000008540	TOMT (ENSPFOG00000008581)	anapc15 (ENSPFOG00000008608)	folr (ENSPFOG00000008631) #22	inppl1a (ENSPFOG00000008661)	phox2a (ENSPFOG00000008962)	CLPB (ENSPFOG00000008997)	stard10 (ENSPFOG00000009246)	ARAP1 (ENSPFOG00000009340)	PDE2A (ENSPFOG00000021686)	cul3b (ENSPFOG00000010374)	ENSPFOG00000010473	MMP28 (ENSPFOG00000010494)	taf15 (ENSPFOG00000022773)	porb (ENSPFOG00000010601)	tmem120ab (ENSPFOG00000022505)	gdpd1 (ENSPFOG00000010895)	ENSPFOG00000011008	gdpd1 (ENSPFOG00000011036)
Sailfin molly	MODERN SPECIES	87													ENSPLAG00000018510	tomt (ENSPLAG00000018490)	anapc15 (ENSPLAG00000018477)	folr (ENSPLAG00000018473) #22	inppl1a (ENSPLAG00000018457)	phox2a (ENSPLAG00000018346)	CLPB (ENSPLAG00000018334)	stard10 (ENSPLAG00000018324)	ARAP1 (ENSPLAG00000018306)	ENSPLAG00000018286	ADRB2 (ENSPLAG00000018276)	ablim3 (ENSPLAG00000018246)	afap1l1b (ENSPLAG00000018004)	fgf13b (ENSPLAG00000017978)	f9b (ENSPLAG00000017940)	MCF2 (ENSPLAG00000017598)	arr3a (ENSPLAG00000017586)	znrd2 (ENSPLAG00000017560)	FAM89B (ENSPLAG00000017555)
Guppy	MODERN SPECIES	443	ENSPREG00000020698	fzd4 (ENSPREG00000020658)	RAB38 (ENSPREG00000020610)	ctsc (ENSPREG00000020586)	grm5b (ENSPREG00000020546)	tyr (ENSPREG00000019772)	ENSPREG00000019643	naalad2 (ENSPREG00000019604) #8	ENSPREG00000019552	ENSPREG00000019491	lrrc51 (ENSPREG00000019476)	lamtor1 (ENSPREG00000019467)	ENSPREG00000019459	tomt (ENSPREG00000019451)	anapc15 (ENSPREG00000019439)	folr (ENSPREG00000019427) #22	inppl1a (ENSPREG00000019344)	phox2a (ENSPREG00000019321)	CLPB (ENSPREG00000019244)	stard10 (ENSPREG00000019212)	ARAP1 (ENSPREG00000019122)	PDE2A (ENSPREG00000018900)	cul3b (ENSPREG00000018825)	ENSPREG00000018799	MMP28 (ENSPREG00000018784)	taf15 (ENSPREG00000018762)	porb (ENSPREG00000018682)	tmem120ab (ENSPREG00000018647)	gdpd1 (ENSPREG00000018611)	ENSPREG00000018587	hip1 (ENSPREG00000018519)
Platyfish	MODERN SPECIES	9	ENSXMAG00000011269	fzd4 (ENSXMAG00000022124)	RAB38 (ENSXMAG00000011258)	ctsc (ENSXMAG00000027463)	grm5b (ENSXMAG00000011216)	tyr (ENSXMAG00000011209)	ENSXMAG00000011187	naalad2 (ENSXMAG00000011164) #8	ENSXMAG00000011159	ENSXMAG00000025532	lrrc51 (ENSXMAG00000011147)	lamtor1 (ENSXMAG00000026503)	ENSXMAG00000021046	tomt (ENSXMAG00000011134)	anapc15 (ENSXMAG00000027789)	folr (ENSXMAG00000011128) #22	inppl1a (ENSXMAG00000011097)	phox2a (ENSXMAG00000024115)	CLPB (ENSXMAG00000011076)	stard10 (ENSXMAG00000011069)	ARAP1 (ENSXMAG00000011055)	PDE2A (ENSXMAG00000011011)	cul3b (ENSXMAG00000010990)	ENSXMAG00000010989	MMP28 (ENSXMAG00000010985)	taf15 (ENSXMAG00000010983)	porb (ENSXMAG00000010967)	tmem120ab (ENSXMAG00000010965)	gdpd1 (ENSXMAG00000010955)	ENSXMAG00000010954	hip1 (ENSXMAG00000010922)
NAME_4	ANCESTRAL SPECIES	48	ENSGT00940000157141	ENSGT00940000157301.b.f	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000167196	ENSGT01030000234598.b.a.b #8	ENSGT00940000177108	ENSGT01100000263529.a.b	ENSGT00940000166338	ENSGT00510000047925.f	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576.j	ENSGT00940000161147	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00940000155066.e.a	ENSGT00590000083134.a.b	ENSGT00940000159596	ENSGT00940000166275	ENSGT00940000156847.a	ENSGT00390000007848.a.c	ENSGT00940000156673	ENSGT00940000164942.b	ENSGT00940000153594.d
Sheepshead minnow	MODERN SPECIES	470	fzd4 (ENSCVAG00000000901)	RAB38 (ENSCVAG00000018050)	ctsc (ENSCVAG00000018043)	grm5b (ENSCVAG00000018004)	tyr (ENSCVAG00000017937)	ENSCVAG00000017915	naalad2 (ENSCVAG00000017871) #8	ENSCVAG00000017815	ENSCVAG00000017799	ENSCVAG00000017786	lrrc51 (ENSCVAG00000017774)	lamtor1 (ENSCVAG00000017717)	ENSCVAG00000000456	tomt (ENSCVAG00000017692)	anapc15 (ENSCVAG00000017679)	folr (ENSCVAG00000017642) #22	inppl1a (ENSCVAG00000017600)	phox2a (ENSCVAG00000017527)	CLPB (ENSCVAG00000017512)	stard10 (ENSCVAG00000017495)	ARAP1 (ENSCVAG00000017458)
Mummichog	MODERN SPECIES	1590	PDGFD (ENSFHEG00000003514)	DYNC2H1 (ENSFHEG00000003493)	fzd4 (ENSFHEG00000003325)	RAB38 (ENSFHEG00000003307)	ctsc (ENSFHEG00000003297)	grm5b (ENSFHEG00000003269)	tyr (ENSFHEG00000003241)	ENSFHEG00000003229	naalad2 (ENSFHEG00000003211) #8	ENSFHEG00000003146	lrrc51 (ENSFHEG00000003118)	lamtor1 (ENSFHEG00000003081)	ENSFHEG00000003067	tomt (ENSFHEG00000000089)	anapc15 (ENSFHEG00000003046)	folr (ENSFHEG00000003033) #22	inppl1a (ENSFHEG00000003021)	phox2a (ENSFHEG00000002937)	CLPB (ENSFHEG00000002928)	stard10 (ENSFHEG00000002914)	ARAP1 (ENSFHEG00000002903)	PDE2A (ENSFHEG00000000083)	cul3b (ENSFHEG00000002854)	ENSFHEG00000002842	MMP28 (ENSFHEG00000002830)	taf15 (ENSFHEG00000002789)	porb (ENSFHEG00000002763)	tmem120ab (ENSFHEG00000002716)	gdpd1 (ENSFHEG00000002693)	ENSFHEG00000002651	hip1 (ENSFHEG00000002633)
Pinecone sodierfish	MODERN SPECIES	4	ARHGEF17 (ENSMMDG00005020851)	relt (ENSMMDG00005020846)	P2RY2 (ENSMMDG00005020842)	FCHSD2 (ENSMMDG00005020836)	ENSMMDG00005020829	ENSMMDG00005020828	ENSMMDG00005020827	yif1b (ENSMMDG00005020822)	ENSMMDG00005020816	wu:fb44b02 (ENSMMDG00005020806)	lrrc51 (ENSMMDG00005020805)	lamtor1 (ENSMMDG00005020803)	ENSMMDG00005020802	tomt (ENSMMDG00005020717)	anapc15 (ENSMMDG00005020709)	folr (ENSMMDG00005020707) #22	inppl1a (ENSMMDG00005020613)	phox2a (ENSMMDG00005020582)	CLPB (ENSMMDG00005020048)	stard10 (ENSMMDG00005020036)	ARAP1 (ENSMMDG00005018279)	PDE2A (ENSMMDG00005018235)	cul3b (ENSMMDG00005017998)	ENSMMDG00005017991	MMP28 (ENSMMDG00005017986)	taf15 (ENSMMDG00005017983)	porb (ENSMMDG00005014422)	tmem120ab (ENSMMDG00005014178)	gdpd1 (ENSMMDG00005014134)	ENSMMDG00005014126	hip1 (ENSMMDG00005014039)
Cod	MODERN SPECIES	7	ENSGMOG00000013244	ENSGMOG00000013237	ilvbl (ENSGMOG00000013220)	ENSGMOG00000023750	ENSGMOG00000013206	ENSGMOG00000013201	ENSGMOG00000031508	ENSGMOG00000014998	ENSGMOG00000017641	ENSGMOG00000036683	LRRC51 (ENSGMOG00000017511)	LAMTOR1 (ENSGMOG00000017505)	ENSGMOG00000017495	TOMT (ENSGMOG00000017484)	ANAPC15 (ENSGMOG00000017474)	FOLR3 (ENSGMOG00000017463) #22	inppl1a (ENSGMOG00000017399)	PHOX2A (ENSGMOG00000032516)	CLPB (ENSGMOG00000017368)	ENSGMOG00000017353	ENSGMOG00000017266	ENSGMOG00000017178	ENSGMOG00000032677	ENSGMOG00000017130	ENSGMOG00000016793	ENSGMOG00000016778	gdpd1 (ENSGMOG00000016760)	ENSGMOG00000030590	ENSGMOG00000016708	bcl7bb (ENSGMOG00000016696)	baz1b (ENSGMOG00000016660)
Protacanthopterygii	ANCESTRAL SPECIES	15	ENSGT00940000155787	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000167196	ENSGT00940000159621	ENSGT01030000234598.b.a.b #8	ENSGT00940000154174.fb.b #9	ENSGT00940000166338	ENSGT01100000263529.a.b	ENSGT00950000183078.b.a.a	ENSGT00510000047925	ENSGT00390000016789	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147	ENSGT00390000012961.o	ENSGT00940000168882	ENSGT00390000012961.p	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692.b	ENSGT00940000159817	ENSGT00530000063695.a	ENSGT00940000174790	ENSGT00390000017288 #24
Salmoninae	ANCESTRAL SPECIES	44	ENSGT00940000159575.d	ENSGT00530000067879.b	ENSGT00940000157141.i	ENSGT00940000157301.b.f	ENSGT00940000155787.w	ENSGT00940000155787.x	ENSGT01030000234595.A.a.jb.a	ENSGT00940000155336.g.a	ENSGT00940000154174.fb.b #9	ENSGT00940000166338	ENSGT00510000047925	ENSGT00390000016789.b	ENSGT00940000156432.b.a	ENSGT00940000161220	ENSGT00390000000938.mb	ENSGT00950000183144.A #22	ENSGT00940000156576.g	ENSGT00940000161147.c	ENSGT00390000012961.o	ENSGT00940000168882	ENSGT00510000047611.ub	ENSGT00940000157424.m.b.b	ENSGT00940000159817.jb.b	ENSGT00940000165320	ENSGT00510000046732.A.d.c.a.a	ENSGT01030000234621.C.a.a.b.m	ENSGT00940000160350.i	ENSGT00940000153798.B.k.b	ENSGT01030000234621.C.a.b.c	ENSGT00390000005140.a.p.a	ENSGT00940000157637.a.c
Salmoninae_a	ANCESTRAL SPECIES	56	ENSGT00940000154620.h.a	ENSGT00530000067879.a	ENSGT00940000157141.j	ENSGT00940000157301.b.f.c	ENSGT00940000155787.w	ENSGT01030000234595.A.a.jb.a.n	ENSGT01030000234595.A.a.jb.a.m.a	ENSGT00940000155336.g.a	ENSGT00940000154174.fb.b #9	ENSGT00940000166338	ENSGT00510000047925	ENSGT00390000016789.b	ENSGT00940000156432.b.a	ENSGT00940000161220	ENSGT00390000000938.mb	ENSGT00950000183144.A #22	ENSGT00940000156576.g	ENSGT00940000161147.c	ENSGT00390000012961.o	ENSGT00510000047611.ub	ENSGT00940000157424.m.b.b	ENSGT00940000159817.jb.b	ENSGT00940000165320	ENSGT00510000046732.A.d.c.a.a	ENSGT01030000234621.C.a.a.b.m	ENSGT00940000160350.i	ENSGT00940000153798.B.k.b	ENSGT01030000234621.C.a.b.c	ENSGT00390000005140.a.p.a	ENSGT00390000012340.h.a	ENSGT00940000157637.a.c
Oncorhynchus	ANCESTRAL SPECIES	57	ENSGT00530000067879.a	ENSGT00940000157141.j	ENSGT00940000157301.b.f.c	ENSGT00940000157301.b.f.d.c.b	ENSGT00940000155787.w	ENSGT01030000234595.A.a.jb.a.n	ENSGT01030000234595.A.a.jb.a.m.a	ENSGT00940000155336.g.a	ENSGT00940000154174.fb.b #9	ENSGT00940000166338	ENSGT00510000047925	ENSGT00390000016789.b	ENSGT00940000156432.b.a	ENSGT00940000161220	ENSGT00390000000938.mb	ENSGT00950000183144.A #22	ENSGT00940000156576.g	ENSGT00940000161147.c	ENSGT00390000012961.o
Rainbow trout	MODERN SPECIES	16	ENSOMYG00000055260	RAB38 (ENSOMYG00000040810)	ctsc (ENSOMYG00000040372)	ENSOMYG00000069612	GRM5 (ENSOMYG00000040870)	tyr (ENSOMYG00000040409)	ENSOMYG00000048565	ENSOMYG00000040815	chordc1a (ENSOMYG00000040453) #9	ENSOMYG00000051509	LRRC51 (ENSOMYG00000040508)	lamtor1 (ENSOMYG00000040517)	ENSOMYG00000040522	TOMT (ENSOMYG00000040563)	ANAPC15 (ENSOMYG00000040604)	FOLR3 (ENSOMYG00000040616) #22	INPPL1 (ENSOMYG00000056307)	ENSOMYG00000063326	PHOX2A (ENSOMYG00000054316)	tiparp (ENSOMYG00000017306)	ssr3 (ENSOMYG00000068525)	KCNAB1 (ENSOMYG00000017319)	ENSOMYG00000049110	ENSOMYG00000017407	gmps (ENSOMYG00000017379)	ENSOMYG00000073338	slc33a1 (ENSOMYG00000017362)	PLCH1 (ENSOMYG00000017423)	ENSOMYG00000058732	ENSOMYG00000017432	ENSOMYG00000017466
Oncorhynchus_a	ANCESTRAL SPECIES	32	ENSGT00940000155677.a.g.b.b	ENSGT00530000067879.b	ENSGT00940000157141.i	ENSGT00940000157301.b.f.d.c.b	ENSGT00940000155787.x	ENSGT00940000155787.w	ENSGT01030000234595.A.a.jb.a.n	ENSGT00940000155336.g.a	ENSGT00940000154174.fb.b #9	ENSGT00940000166338	ENSGT00510000047925	ENSGT00390000016789.b	ENSGT00940000156432.b.a	ENSGT00940000161220	ENSGT00390000000938.mb	ENSGT00950000183144.A #22	ENSGT00940000156576.g	ENSGT00940000161147.c	ENSGT00390000012961.o
Coho salmon	MODERN SPECIES	9	ENSOKIG00005009071	PDE2A (ENSOKIG00005009117)	ENSOKIG00005009510	ENSOKIG00005009516	ENSOKIG00005009528	tyr (ENSOKIG00005009538)	CTSC (ENSOKIG00005009559)	ENSOKIG00005009574	chordc1a (ENSOKIG00005009586) #9	ENSOKIG00005009749	lrrc51 (ENSOKIG00005009789)	lamtor1 (ENSOKIG00005009819)	ENSOKIG00005009835	tomt (ENSOKIG00005009855)	anapc15 (ENSOKIG00005009955)	folr (ENSOKIG00005009968) #22	inppl1a (ENSOKIG00005010021)	phox2a (ENSOKIG00005010203)	CLPB (ENSOKIG00005010215)	ENSOKIG00005010251	RAB38 (ENSOKIG00005010256)	CTSC (ENSOKIG00005010266)	RAB38 (ENSOKIG00005010282)	fzd4 (ENSOKIG00005010285)	ENSOKIG00005010289	DYNC2H1 (ENSOKIG00005010324)	ENSOKIG00005010353	PDGFD (ENSOKIG00005010386)	gria4a (ENSOKIG00005010591)	MSANTD4 (ENSOKIG00005014715)	aasdhppt (ENSOKIG00005014720)
Chinook salmon	MODERN SPECIES	5	glod4 (ENSOTSG00005005457)	zgc:165481 (ENSOTSG00005005473)	ENSOTSG00005001747	RAB38 (ENSOTSG00005001752)	ctsc (ENSOTSG00005001762)	grm5b (ENSOTSG00005001811)	tyr (ENSOTSG00005001817)	ctsc (ENSOTSG00005001835)	chordc1a (ENSOTSG00005001865) #9	ENSOTSG00005001929	lrrc51 (ENSOTSG00005001932)	lamtor1 (ENSOTSG00005001943)	ENSOTSG00005001951	tomt (ENSOTSG00005001955)	anapc15 (ENSOTSG00005001957)	folr (ENSOTSG00005001959) #22	ENSOTSG00005001963	phox2a (ENSOTSG00005002076)	ENSOTSG00005002241	ccnl1a (ENSOTSG00005002581)	ENSOTSG00005003060	ENSOTSG00005003096	ENSOTSG00005003124	ENSOTSG00005003153	olfcj1 (ENSOTSG00005003163)	olfcg6 (ENSOTSG00005003169)	ENSOTSG00005003301	ENSOTSG00005003571	ENSOTSG00005003578	ENSOTSG00005003644	ENSOTSG00005003646
Salmo	ANCESTRAL SPECIES	18	ENSGT00940000154620.h.a	ENSGT00530000067879.a	ENSGT00940000157141.j	ENSGT00940000157301.b.f.c	ENSGT01030000234595.A.a.jb.a.m.a	ENSGT00940000155336.g.a	ENSGT00940000155787.w	ENSGT01060000252820	ENSGT00940000154174.fb.b.a #9	ENSGT00940000166338	ENSGT00510000047925.d	ENSGT00390000016789.b	ENSGT00940000156432.b.a	ENSGT00940000161220	ENSGT00390000000938.mb	ENSGT00950000183144.A #22	ENSGT00940000156576.g	ENSGT00940000161147.c	ENSGT00390000012961.o	ENSGT00510000047611.ub	ENSGT00940000157424.m.b.b	ENSGT00940000159817.jb.b	ENSGT00940000165320	ENSGT00940000157221.x.i.b	ENSGT00990000211390	ENSGT00390000000214.a.b.k.a	ENSGT00390000015965	ENSGT01100000263563.c.b.c	ENSGT00390000005197.a.cb.e.a	ENSGT00390000018895.a.m.a	ENSGT00390000018549.k
River trout	MODERN SPECIES	4	ENSSTUG00000013017	fzd4 (ENSSTUG00000013041)	RAB38 (ENSSTUG00000013046)	ctsc (ENSSTUG00000013066)	ENSSTUG00000013086	tyr (ENSSTUG00000013133)	ctsc (ENSSTUG00000018723)	ENSSTUG00000018740	chordc1a (ENSSTUG00000018766) #9	ENSSTUG00000018796	lrrc51 (ENSSTUG00000018861)	lamtor1 (ENSSTUG00000018867)	ENSSTUG00000018871	tomt (ENSSTUG00000018879)	anapc15 (ENSSTUG00000018880)	folr (ENSSTUG00000018891) #22	inppl1a (ENSSTUG00000018914)	phox2a (ENSSTUG00000018975)	CLPB (ENSSTUG00000019064)	stard10 (ENSSTUG00000019966)	ENSSTUG00000019974	ENSSTUG00000020011	PDGFD (ENSSTUG00000020120)	PDE2A (ENSSTUG00000020401)	ENSSTUG00000024110	ENSSTUG00000024197	P2RY2 (ENSSTUG00000024219)	relt (ENSSTUG00000024230)	ENSSTUG00000024238	P2RY6 (ENSSTUG00000024244)	ENSSTUG00000024255
Huchen	MODERN SPECIES	2678						ENSHHUG00000041830	ENSHHUG00000041832	tyr (ENSHHUG00000041833)	chordc1a (ENSHHUG00000041912) #9	wu:fb44b02 (ENSHHUG00000041927)	lrrc51 (ENSHHUG00000041976)	lamtor1 (ENSHHUG00000041980)	ENSHHUG00000041995	tomt (ENSHHUG00000041998)	anapc15 (ENSHHUG00000042035)	folr (ENSHHUG00000042036) #22
Northern pike	MODERN SPECIES		RAB38 (ENSELUG00000011561)	ctsc (ENSELUG00000011548)	grm5b (ENSELUG00000000414)	ENSELUG00000031147	tyr (ENSELUG00000011493)	ENSELUG00000011453	naalad2 (ENSELUG00000011396) #8	chordc1a (ENSELUG00000011345) #9	ENSELUG00000011300	wu:fb44b02 (ENSELUG00000011268)	lrrc51 (ENSELUG00000011176)	lamtor1 (ENSELUG00000031764)	ENSELUG00000001616	tomt (ENSELUG00000030914)	anapc15 (ENSELUG00000000393)	folr (ENSELUG00000011064) #22	inppl1a (ENSELUG00000011031)	phox2a (ENSELUG00000010927)	CLPB (ENSELUG00000010906)	stard10 (ENSELUG00000010852)	ARAP1 (ENSELUG00000010786)	PDE2A (ENSELUG00000000383)	cep57 (ENSELUG00000010594)	ENSELUG00000010579	mre11a (ENSELUG00000010562) #24	ENSELUG00000010544	FCHSD2 (ENSELUG00000010513)	P2RY2 (ENSELUG00000010427)	relt (ENSELUG00000010415)	ARHGEF17 (ENSELUG00000010368)	P2RY6 (ENSELUG00000010325)
Otomorpha	ANCESTRAL SPECIES	416													ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147.b	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692	ENSGT00940000159817	ENSGT00530000063695.a
Otophysi	ANCESTRAL SPECIES	149												ENSGT00940000158415	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147.b	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692	ENSGT00940000159817	ENSGT00530000063695.a	ENSGT00940000157673	ENSGT00940000164152.a	ENSGT01020000230768	ENSGT00940000164682	ENSGT00940000155439.a.b.b	ENSGT00940000167797	ENSGT00940000155439.a.b.a.b
Characiphysae	ANCESTRAL SPECIES	94												ENSGT00940000158415	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147.b	ENSGT00940000175000	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000174692	ENSGT00940000159817	ENSGT00530000063695.a	ENSGT00940000157673	ENSGT00940000164152.a	ENSGT01020000230768	ENSGT00940000164682	ENSGT00940000155439.a.b.b	ENSGT00940000167797	ENSGT00950000183106.a.a.b
Characiphysae_b	ANCESTRAL SPECIES	90												ENSGT00940000158415	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576.d	ENSGT00940000156576.c	ENSGT00940000161147.b	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692	ENSGT00940000159817	ENSGT00530000063695.a	ENSGT00940000157673	ENSGT00940000164152.a	ENSGT01020000230768	ENSGT00940000164682	ENSGT00940000155439.a.b.b	ENSGT00940000167797
Characoidei	ANCESTRAL SPECIES	106												ENSGT00940000158415	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576.d	ENSGT00940000156576.c	ENSGT00940000161147.b	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000174692	ENSGT00940000159817	ENSGT00530000063695.a	ENSGT00940000157673	ENSGT00940000164152.a	ENSGT01020000230768	ENSGT00940000164682	ENSGT00940000155439.a.b.b	ENSGT00940000167797
Red-bellied piranha	MODERN SPECIES	771								bloc1s3 (ENSPNAG00000000601)	ifi30 (ENSPNAG00000000605)	ENSPNAG00000008047	clca1 (ENSPNAG00000008061)	KBTBD3 (ENSPNAG00000000632)	ENSPNAG00000000638	tomt (ENSPNAG00000008075)	anapc15 (ENSPNAG00000008081)	folr (ENSPNAG00000008089) #22	ENSPNAG00000008095	inppl1a (ENSPNAG00000000674)	phox2a (ENSPNAG00000008111)
Mexicana tetra	MODERN SPECIES	192										ENSAMXG00000034726	KBTBD3 (ENSAMXG00000038226)	ENSAMXG00000039154	ENSAMXG00000011568	tomt (ENSAMXG00000011574)	anapc15 (ENSAMXG00000037586)	folr (ENSAMXG00000011581) #22	ENSAMXG00000034170
Electric eel	MODERN SPECIES	268								megf6 (ENSEEEG00000004174)	mffa (ENSEEEG00000004177)	mrpl44 (ENSEEEG00000004179)	agfg1a (ENSEEEG00000004183)	KBTBD3 (ENSEEEG00000004197)	ENSEEEG00000004201	tomt (ENSEEEG00000004202)	anapc15 (ENSEEEG00000004203)	folr (ENSEEEG00000004204) #22	inppl1a (ENSEEEG00000004206)	phox2a (ENSEEEG00000004207)	CLPB (ENSEEEG00000004229)	stard10 (ENSEEEG00000004547)	ARAP1 (ENSEEEG00000004549)	ENSEEEG00000004551	PDE2A (ENSEEEG00000004552)	cep57 (ENSEEEG00000004555)	ECEL1 (ENSEEEG00000004559)	ENSEEEG00000004567
Channel catfish	MODERN SPECIES	8	Mrps23 (ENSIPUG00000015227)	nos2 (ENSIPUG00000015080)	lyrm9 (ENSIPUG00000015062)	NOS2 (ENSIPUG00000015006)	nlk (ENSIPUG00000014972)	ENSIPUG00000014954	ENSIPUG00000014930	ENSIPUG00000014919	wscd1 (ENSIPUG00000014885)	gucy2f (ENSIPUG00000014854)	serpinh1b (ENSIPUG00000014838)	kbtbd3 (ENSIPUG00000014828)	ENSIPUG00000014807	tomt (ENSIPUG00000014788)	anapc15 (ENSIPUG00000014780)	folr (ENSIPUG00000014768) #22	inppl1a (ENSIPUG00000014726)	GDPD5 (ENSIPUG00000014617)	HSPA13 (ENSIPUG00000014573)	samsn1a (ENSIPUG00000014553)	zbtb7b (ENSIPUG00000014538)	NRIP1 (ENSIPUG00000014531)	zgc:153372 (ENSIPUG00000014484)	tsku (ENSIPUG00000014475)	ENSIPUG00000014446	rap1gap2 (ENSIPUG00000014328)	xaf1 (ENSIPUG00000014302)	tekt1 (ENSIPUG00000014289)	inpp5ka (ENSIPUG00000014228)	ENSIPUG00000014188	ENSIPUG00000014178
Cyprinoidei	ANCESTRAL SPECIES	82											ENSGT00390000009409	ENSGT00940000158415	ENSGT00940000156432.b	ENSGT00940000161220	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147.b	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000157424	ENSGT00940000159817	ENSGT00530000063695.a	ENSGT00940000157673	ENSGT00940000164152.a	ENSGT01020000230768	ENSGT00940000164682	ENSGT00940000155439.a.b.a.a	ENSGT00940000155439.a.b.a.b	ENSGT00940000167797	ENSGT00950000183106.a.a.b
Cyprininae	ANCESTRAL SPECIES	322									ENSGT00940000164977.b	ENSGT00940000160308.v	ENSGT00390000007686.a.f	ENSGT00390000009409	ENSGT00940000158415	ENSGT00940000161220.h	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576.f	ENSGT00940000161147.b.b	ENSGT00390000012961	ENSGT00510000047611.rb.b	ENSGT00940000157424.hc.b	ENSGT00510000047611.rb.a	ENSGT00940000157424.hc.a	ENSGT00940000159817.g	ENSGT00530000063695.a.h	ENSGT00940000157673.j	ENSGT00940000164152.a.c	ENSGT01020000230768.c	ENSGT00940000164682.a	ENSGT00940000155439.a.b.a.a	ENSGT00940000155439.a.b.a.b.b
Cyprininae_a	ANCESTRAL SPECIES	442			ENSGT00940000164285.b.a	ENSGT00390000001474	ENSGT00390000008920.c.b	ENSGT00940000159702.k	ENSGT00550000074807.c.c.a	ENSGT00940000159702.l	ENSGT00550000074807.c.c.b	ENSGT00940000164977.b	ENSGT00940000160308.v	ENSGT00390000007686.a.f	ENSGT00940000158415	ENSGT00940000161220.h	ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576.f	ENSGT00940000161147.b.b	ENSGT00390000012961.i	ENSGT00510000047611.rb.b	ENSGT00940000157424.hc.b
Golden-line barbel	MODERN SPECIES	612	ENSSGRG00000016299	SIK3 (ENSSGRG00000016300)	ENSSGRG00000016484	SIDT2 (ENSSGRG00000016526)	socs9 (ENSSGRG00000017943)	paf1 (ENSSGRG00000017945)	SAMD4B (ENSSGRG00000018080)	ENSSGRG00000018123	ENSSGRG00000018125	DMWD (ENSSGRG00000018426)	eif3k (ENSSGRG00000018428)	KBTBD3 (ENSSGRG00000018429)	ENSSGRG00000018430	tomt (ENSSGRG00000018431)	ANAPC15 (ENSSGRG00000018432)	folr (ENSSGRG00000018433) #22	inppl1a (ENSSGRG00000018452)	phox2a (ENSSGRG00000018592)	CLPB (ENSSGRG00000018593)	stard10 (ENSSGRG00000018609)	ENSSGRG00000018613	ENSSGRG00000018616
Common carp reference	MODERN SPECIES	26	ENSCCRG00000024084	ENSCCRG00000080235	socs9 (ENSCCRG00000067075)	paf1 (ENSCCRG00000070452)	ENSCCRG00000032179	psma6l (ENSCCRG00000032183)	ENSCCRG00000054035	ENSCCRG00000042726	ENSCCRG00000031152	ENSCCRG00000066233	ENSCCRG00000081370	eif3k (ENSCCRG00000065013)	ENSCCRG00000054691	tomt (ENSCCRG00000049280)	ANAPC15 (ENSCCRG00000059221)	FOLR3 (ENSCCRG00000022805) #22	inppl1a (ENSCCRG00000022801)	PHOX2A (ENSCCRG00000082230)	CLPB (ENSCCRG00000022794)	ENSCCRG00000003630	ENSCCRG00000031216	ENSCCRG00000056715	cep57 (ENSCCRG00000071036)	ENSCCRG00000062159	zgc:153039 (ENSCCRG00000024695)	chrd (ENSCCRG00000021437)	clcn2c (ENSCCRG00000021108)	CLCN2 (ENSCCRG00000049028)	FAM131A (ENSCCRG00000073992)	ENSCCRG00000073727	PSMD2 (ENSCCRG00000038886)
Goldfish	MODERN SPECIES	6	igsf11 (ENSCARG00000005101)	lrfn1 (ENSCARG00000005111)	ENSCARG00000005116	ENSCARG00000005136	ENSCARG00000005147	SIK3 (ENSCARG00000005189)	otx5 (ENSCARG00000005548)	MAP4K1 (ENSCARG00000005580)	DMWD (ENSCARG00000005684)	ENSCARG00000005691	eif3k (ENSCARG00000005711)	ENSCARG00000005792	KBTBD3 (ENSCARG00000005803)	tomt (ENSCARG00000005811)	anapc15 (ENSCARG00000005820)	folr (ENSCARG00000005825) #22	inppl1a (ENSCARG00000005892)	phox2a (ENSCARG00000006671)	CLPB (ENSCARG00000006682)	stard10 (ENSCARG00000006706)	ARAP1 (ENSCARG00000006769)	ENSCARG00000007198	ENSCARG00000007211	ENSCARG00000007220	ENSCARG00000007225	ENSCARG00000007242	MPZL2 (ENSCARG00000007246)	ENSCARG00000007252	ENSCARG00000007264	ENSCARG00000007273	SIK3 (ENSCARG00000007316)
Zebrafish	MODERN SPECIES	6	igsf11 (ENSDARG00000109783)	ENSDARG00000011463	ENSDARG00000087950	zgc:162872 (ENSDARG00000012184)	ilkap (ENSDARG00000040615)	clcn2c (ENSDARG00000060439)	chrd (ENSDARG00000006110)	zgc:153039 (ENSDARG00000102724)	ECEL1 (ENSDARG00000060549)	cep57 (ENSDARG00000067668)	ENSDARG00000079064	ENSDARG00000114444	gap43 (ENSDARG00000099744)	ENSDARG00000103069	anapc15 (ENSDARG00000101285)	folr (ENSDARG00000102442) #22	ENSDARG00000114026	CLPB (ENSDARG00000088463)	ENSDARG00000090232	phox2a (ENSDARG00000007406)	inppl1a (ENSDARG00000104222)	SIK3 (ENSDARG00000088083)	SIDT2 (ENSDARG00000045976)	ENSDARG00000101186	socs9 (ENSDARG00000101985)	paf1 (ENSDARG00000098432)	stard10 (ENSDARG00000097718)	tomt (ENSDARG00000115463)	ENSDARG00000089563	KBTBD3 (ENSDARG00000060512)	ENSDARG00000116346
Clupeiformes	ANCESTRAL SPECIES	481															ENSGT00390000000938	ENSGT00950000183144.A #22	ENSGT00940000156576	ENSGT00940000161147.b	ENSGT00390000012961	ENSGT00510000047611	ENSGT00940000159817	ENSGT00530000063695.a
Denticle herring	MODERN SPECIES	10	ENSDCDG00000017851	psmd2 (ENSDCDG00000021982)	prss16 (ENSDCDG00000022713)	serpine2 (ENSDCDG00000022719)	wdfy1 (ENSDCDG00000022727)	dhrs12la (ENSDCDG00000022746)	ENSDCDG00000022748	kcne4 (ENSDCDG00000022749)	acsl3a (ENSDCDG00000022780)	ENSDCDG00000025823	pxylp1 (ENSDCDG00000025826)	ENSDCDG00000025828	PDE2A (ENSDCDG00000025895)	cep57 (ENSDCDG00000028419)	anapc15 (ENSDCDG00000028420)	folr (ENSDCDG00000028422) #22	inppl1a (ENSDCDG00000028450)	phox2a (ENSDCDG00000028817)	CLPB (ENSDCDG00000028875)	stard10 (ENSDCDG00000030376)	ARAP1 (ENSDCDG00000030410)	ENSDCDG00000031319	ENSDCDG00000031329	ENSDCDG00000031331	sst1.1 (ENSDCDG00000031334)	MASP1 (ENSDCDG00000031335)	ostn (ENSDCDG00000031337)	ENSDCDG00000031342	ENSDCDG00000031345	ENSDCDG00000031351	ENSDCDG00000031357
Atlantic herring	MODERN SPECIES	25	ENSCHAG00000011207	ENSCHAG00000011177	ENSCHAG00000011066	ENSCHAG00000010979	zgc:153039 (ENSCHAG00000010912)	ctsc (ENSCHAG00000010627)	GRM5 (ENSCHAG00000010541)	ENSCHAG00000010452	ENSCHAG00000010437	ENSCHAG00000010428	SGPP2 (ENSCHAG00000010421)	farsb (ENSCHAG00000010287)	ENSCHAG00000010269	ENSCHAG00000010254	anapc15 (ENSCHAG00000010235)	FOLR2 (ENSCHAG00000010214) #22	ENSCHAG00000010187	phox2a (ENSCHAG00000010163)	CLPB (ENSCHAG00000009705)	ENSCHAG00000009688	ENSCHAG00000009675	ENSCHAG00000008820	ENSCHAG00000008710	ENSCHAG00000008684	dhrs12la (ENSCHAG00000008499)	wdfy1 (ENSCHAG00000008330)	serpine2 (ENSCHAG00000008261)	prss16 (ENSCHAG00000008184)	PSMD2 (ENSCHAG00000007125)	ENSCHAG00000006518	ENSCHAG00000001733
Elephant shark	MODERN SPECIES	2469																folr (ENSCMIG00000006999) #22
Cyclostomata	ANCESTRAL SPECIES	33												ENSGT00940000160339	ENSGT00940000156386	ENSGT01100000263512.a	ENSGT00550000075160	ENSGT00950000183144.A #22
Lamprey	MODERN SPECIES	79													pou4f2 (ENSPMAG00000004299)	kif3a (ENSPMAG00000004239)	polr1d (ENSPMAG00000004228)	folr (ENSPMAG00000004213) #22	PDE2A (ENSPMAG00000004190)
Hagfish	MODERN SPECIES	216												pou4f2 (ENSEBUG00000006469)	kif3a (ENSEBUG00000016679)	ENSEBUG00000003320	ENSEBUG00000011748	folr (ENSEBUG00000012723) #22	ENSEBUG00000003298	ENSEBUG00000001480	ENSEBUG00000009282	rps3 (ENSEBUG00000003683)	ENSEBUG00000001372	ENSEBUG00000000567	ENSEBUG00000005673	ENSEBUG00000005859	ENSEBUG00000012601	ENSEBUG00000001909	ENSEBUG00000012127	hccsb (ENSEBUG00000000951)	mrpl30 (ENSEBUG00000013592)	ENSEBUG00000012859	rnpep (ENSEBUG00000010565)
Ciona	DUPLICATION
Ciona	DUPLICATION
Ciona	ANCESTRAL SPECIES																	ENSGT00950000183144.A.a.a #22
Ciona savignyi	MODERN SPECIES	236	ENSCSAVG00000010851	ENSCSAVG00000010850	ENSCSAVG00000010848	ENSCSAVG00000010847	ENSCSAVG00000010844	ENSCSAVG00000010843	ENSCSAVG00000010810	ENSCSAVG00000010808	ENSCSAVG00000010807	ENSCSAVG00000010805	ENSCSAVG00000010803	ENSCSAVG00000010802	ENSCSAVG00000010798	ENSCSAVG00000010795	ENSCSAVG00000010791	ENSCSAVG00000010790 #22	ENSCSAVG00000010787	ENSCSAVG00000010765	ENSCSAVG00000010764	ENSCSAVG00000010763	ENSCSAVG00000010762	ENSCSAVG00000010721	ENSCSAVG00000010720	ENSCSAVG00000010715	ENSCSAVG00000010713	ENSCSAVG00000010697	ENSCSAVG00000010693	ENSCSAVG00000010683	ENSCSAVG00000010682	ENSCSAVG00000010681	ENSCSAVG00000010678
Ciona intestinalis	MODERN SPECIES	9	ENSCING00000019216	ENSCING00000021408	ENSCING00000007120	ENSCING00000007119	ENSCING00000007118	ENSCING00000012213	ENSCING00000007091	ENSCING00000021744	ENSCING00000024877	ENSCING00000012212	ENSCING00000024477	ENSCING00000023181	ENSCING00000020777	ENSCING00000009306	ENSCING00000007042	ENSCING00000012209 #22	ENSCING00000012207	ENSCING00000007038	ENSCING00000019449	ENSCING00000020793	ENSCING00000007033	ENSCING00000023893	ENSCING00000012206	ENSCING00000019797	ENSCING00000024853	ENSCING00000009304	ENSCING00000009305	ENSCING00000024542	ENSCING00000022069	ENSCING00000000221	ENSCING00000024110
Ciona	ANCESTRAL SPECIES																	ENSGT00950000183144.A.a.b #22
Ciona savignyi	MODERN SPECIES	318	ENSCSAVG00000000975	ENSCSAVG00000000966	ENSCSAVG00000000963	ENSCSAVG00000000962	ENSCSAVG00000000934	ENSCSAVG00000000931	ENSCSAVG00000000927	ENSCSAVG00000000896	ENSCSAVG00000000894	ENSCSAVG00000000886	ENSCSAVG00000000884	ENSCSAVG00000000879	ENSCSAVG00000000861	ENSCSAVG00000000851	ENSCSAVG00000000821	ENSCSAVG00000000818 #22	ENSCSAVG00000000814	ENSCSAVG00000000804
Ciona intestinalis	MODERN SPECIES	6	ENSCING00000009496	ENSCING00000020360	ENSCING00000020176	ENSCING00000011434	ENSCING00000023668	ENSCING00000021765	ENSCING00000020234	ENSCING00000011436	ENSCING00000009812	ENSCING00000005955	ENSCING00000024032	ENSCING00000005942	zf(dhhc)-1 (ENSCING00000005948)	ENSCING00000019030	ENSCING00000005950	ENSCING00000005953 #22	ENSCING00000024103	ENSCING00000005938	ENSCING00000011490	ENSCING00000024546	ENSCING00000005939	ENSCING00000011489	ENSCING00000005940	ENSCING00000019193	ENSCING00000022692	ENSCING00000018558	ENSCING00000005941	ENSCING00000021089	ENSCING00000022875	ENSCING00000011494	ENSCING00000023602
Ciona	ANCESTRAL SPECIES	1158																ENSGT00950000183144.A.b #22	ENSGT00940000155763
Ciona savignyi	MODERN SPECIES	46	ENSCSAVG00000007152	ENSCSAVG00000007150	ENSCSAVG00000007146	ENSCSAVG00000007094	ENSCSAVG00000007089	ENSCSAVG00000007083	ENSCSAVG00000007081	ENSCSAVG00000006976	ENSCSAVG00000006720	ENSCSAVG00000006716	ENSCSAVG00000006670	ENSCSAVG00000006626	ENSCSAVG00000006620	ENSCSAVG00000006618	ENSCSAVG00000005638	ENSCSAVG00000005634 #22	ENSCSAVG00000005623	ENSCSAVG00000005621	ENSCSAVG00000004814	ENSCSAVG00000004809	ENSCSAVG00000004802	ENSCSAVG00000004798	ENSCSAVG00000004792	ENSCSAVG00000004788	ENSCSAVG00000004785	ENSCSAVG00000004602	ENSCSAVG00000004595	ENSCSAVG00000004594	ENSCSAVG00000004585	ENSCSAVG00000004582	ENSCSAVG00000004576
Ciona intestinalis	MODERN SPECIES	9	ENSCING00000009216	ENSCING00000022760	ENSCING00000020824	ENSCING00000021113	ENSCING00000025034	ENSCING00000024645	cbfb (ENSCING00000009214)	ENSCING00000020444	ENSCING00000012097	ENSCING00000009212	ENSCING00000023696	ENSCING00000023245	ENSCING00000018307	ENSCING00000023167	ENSCING00000009210	ENSCING00000009209 #22	ENSCING00000024915	ENSCING00000009208	ENSCING00000009207	ENSCING00000019854	ENSCING00000009206	ENSCING00000009205	ENSCING00000020582	ENSCING00000016191	ENSCING00000012099	ENSCING00000009204	ENSCING00000018878	ENSCING00000022820	ENSCING00000023445	ENSCING00000012100	ENSCING00000012101
Chordata	ANCESTRAL SPECIES																	ENSGT00950000183144.B ##22
Vertebrata	ANCESTRAL SPECIES	200																ENSGT00950000183144.B ##22	ENSGT00420000029753	ENSGT00390000016650
Cyclostomata	ANCESTRAL SPECIES	235																ENSGT00950000183144.B ##22	ENSGT00420000029753	ENSGT00390000016650
Hagfish	MODERN SPECIES	1166														ENSEBUG00000005314	ENSEBUG00000009903	ENSEBUG00000005242 ##22	ENSEBUG00000002320	ENSEBUG00000008289	ENSEBUG00000014873	ENSEBUG00000002038
Lamprey	MODERN SPECIES	630																ENSPMAG00000003376 ##22
Gnathostomata	ANCESTRAL SPECIES	26										ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259	ENSGT00940000155705	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277	ENSGT00510000047220	ENSGT00940000153167.B	ENSGT00940000158765	ENSGT01070000253866	ENSGT00740000116213	ENSGT00390000003464	ENSGT00390000018130.b	ENSGT00390000016466
Elephant shark	DUPLICATION
Elephant shark	MODERN SPECIES	1559	KIF2C (ENSCMIG00000008872)	coa7 (ENSCMIG00000008880)	zyg11 (ENSCMIG00000008890)	echdc2 (ENSCMIG00000008908)	tmem53 (ENSCMIG00000008920)	ARMH1 (ENSCMIG00000008924)	IPO13 (ENSCMIG00000008946)	ENSCMIG00000009104	ENSCMIG00000009267	ebna1bp2 (ENSCMIG00000009308)	lurap1 (ENSCMIG00000009312)	pomgnt1 (ENSCMIG00000009351)	TSPAN1 (ENSCMIG00000009522)	pik3r3b (ENSCMIG00000009637)	MAST2 (ENSCMIG00000009962)	ENSCMIG00000010166 ##22	IPP (ENSCMIG00000010168)	tmem69 (ENSCMIG00000010171)	GPBP1L1 (ENSCMIG00000010173)	ENSCMIG00000010180	ENSCMIG00000010182	NASP (ENSCMIG00000010185)	akr1a1b (ENSCMIG00000010205)	prdx1 (ENSCMIG00000010227)	plpp3 (ENSCMIG00000010232)	MUTYH (ENSCMIG00000010246)	toe1 (ENSCMIG00000010266)	tesk2 (ENSCMIG00000010274)	ENSCMIG00000010284	ENSCMIG00000010290	mmachc (ENSCMIG00000010293)
Elephant shark	MODERN SPECIES	1665	GTF2F1 (ENSCMIG00000004835)	PSPN (ENSCMIG00000004844)	ALKBH7 (ENSCMIG00000004848)	wdr83os (ENSCMIG00000004852)	wdr83 (ENSCMIG00000004863)	ENSCMIG00000004870	FBXW9 (ENSCMIG00000004871)	TNPO2 (ENSCMIG00000005025)	TRIP10 (ENSCMIG00000005715)	ENSCMIG00000005718	notch3 (ENSCMIG00000005776)	SHFL (ENSCMIG00000005848)	rab3db (ENSCMIG00000005855)	ENSCMIG00000005862	MAST1 (ENSCMIG00000005877)	ENSCMIG00000005905 ##22	ENSCMIG00000005910	prdx2 (ENSCMIG00000005918)	ENSCMIG00000005930	ndufb7 (ENSCMIG00000005932)	ENSCMIG00000005937	ENSCMIG00000005940
Euteleostomi	ANCESTRAL SPECIES	292											ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00940000167241	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a	ENSGT00390000018130.b
Sarcopterygii	ANCESTRAL SPECIES	92											ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.a.a	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00940000167241	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a	ENSGT00390000018130.b	ENSGT00390000003464	ENSGT00740000116213	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00510000049326.b.a	ENSGT01050000244838.B
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	588																ENSLACG00000011696 ##22	IPP (ENSLACG00000011893)	TMEM69 (ENSLACG00000012132)	GPBP1L1 (ENSLACG00000012352)	ENSLACG00000012734	NASP (ENSLACG00000013351)	PRDX1 (ENSLACG00000014285)	zte38 (ENSLACG00000014360)	MMACHC (ENSLACG00000015013)	ENSLACG00000015468	ENSLACG00000022540	TESK2 (ENSLACG00000016055)	ENSLACG00000016268
Coelacanth	MODERN SPECIES	418	ZNF653 (ENSLACG00000017182)	elavl3 (ENSLACG00000016601)	ENSLACG00000016391	PRKCSH (ENSLACG00000016148)	ODAD3 (ENSLACG00000016002)	ENSLACG00000015250	ENSLACG00000015043	ENSLACG00000014678	PLPPR2 (ENSLACG00000014212)	AP1M2 (ENSLACG00000013909)	CDKN2D (ENSLACG00000013803)	KRI1 (ENSLACG00000013401)	ENSLACG00000013249	ATG4D (ENSLACG00000012770)	MAST1 (ENSLACG00000011873)	rtbdn (ENSLACG00000008516) ##22	RNASEH2A (ENSLACG00000007789)	HOOK2 (ENSLACG00000006401)	JUNB (ENSLACG00000001525)
Tetrapoda	ANCESTRAL SPECIES	8	ENSGT00940000163316	ENSGT00940000161237	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00390000002634.a	ENSGT00940000164108.a	ENSGT00940000164623.C	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Anura	ANCESTRAL SPECIES	6	ENSGT01050000244898.a.a.b	ENSGT00940000154587.a.a	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000163316.c	ENSGT00940000161237	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00530000063646.b
Frog	DUPLICATION
Frog	MODERN SPECIES	4	ENSXETG00000043105	faah.3 (ENSXETG00000004361)	faah.1 (ENSXETG00000024500)	faah.2 (ENSXETG00000004365)	nsun4 (ENSXETG00000024501)	uqcrh (ENSXETG00000042017)	lrrc41 (ENSXETG00000036043)	rad54l (ENSXETG00000004369)	ENSXETG00000045488	ENSXETG00000046808	lurap1 (ENSXETG00000024502)	pomgnt1 (ENSXETG00000004370)	tspan1 (ENSXETG00000004371)	pik3r3 (ENSXETG00000003253)	mast2 (ENSXETG00000003254)	izumo1r (ENSXETG00000003259) ##22	ENSXETG00000037795	atp6v0b (ENSXETG00000003260)	b4galt2 (ENSXETG00000003265)	ENSXETG00000045019	vwc2l.2 (ENSXETG00000003266)	ccdc24 (ENSXETG00000032737)	slc6a9 (ENSXETG00000003268)	klf17 (ENSXETG00000001058)	dmap1 (ENSXETG00000001057)	ENSXETG00000035284	eri3 (ENSXETG00000037080)	rnf220.1 (ENSXETG00000001054)	tmem53 (ENSXETG00000001053)	ARMH1 (ENSXETG00000039519)	kif2c (ENSXETG00000013598)
Frog	MODERN SPECIES	3	ENSXETG00000043596	ENSXETG00000045259	ENSXETG00000045037	ENSXETG00000042146	ENSXETG00000037581	rab3d (ENSXETG00000027219)	plppr2 (ENSXETG00000007925)	swsap1 (ENSXETG00000032165)	epor (ENSXETG00000007924)	dnase2 (ENSXETG00000007923)	thibz (ENSXETG00000007922)	ENSXETG00000040763	mast1 (ENSXETG00000004760)	ENSXETG00000044297	ENSXETG00000043080	rtbdn (ENSXETG00000004761) ##22	rnaseh2a (ENSXETG00000004762)	prdx2 (ENSXETG00000004763)	junb (ENSXETG00000034515)	hook2 (ENSXETG00000004765)	best2 (ENSXETG00000025368)	get3 (ENSXETG00000004767)	trir (ENSXETG00000004768)	rnf11.2 (ENSXETG00000004769)	tnpo2 (ENSXETG00000004771)	fbxw9 (ENSXETG00000004770)	dhps (ENSXETG00000005599)	wdr83 (ENSXETG00000005598)	wdr83os (ENSXETG00000025826)	man2b1 (ENSXETG00000005597)	trmt1 (ENSXETG00000033863)
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	1531																ENSLLEG00000016811 ##22	ATP6V0B (ENSLLEG00000016889)
Leishan spiny toad	MODERN SPECIES	6	ELAVL3 (ENSLLEG00000022639)	PRKCSH (ENSLLEG00000022014)	ODAD3 (ENSLLEG00000021873)	ENSLLEG00000021844	RGL3 (ENSLLEG00000021695)	SWSAP1 (ENSLLEG00000021653)	EPOR (ENSLLEG00000021493)	PLPPR2 (ENSLLEG00000021392)	RAB3D (ENSLLEG00000021304)	ENSLLEG00000021142	ENSLLEG00000021118	ENSLLEG00000021093	ENSLLEG00000021057	ENSLLEG00000021031	MAST1 (ENSLLEG00000020461)	ENSLLEG00000020204 ##22	RNASEH2A (ENSLLEG00000020091)	ENSLLEG00000019999	ENSLLEG00000019922	JUNB (ENSLLEG00000019884)	ENSLLEG00000019860	HOOK2 (ENSLLEG00000018942)	BEST2 (ENSLLEG00000018793)	TRIR (ENSLLEG00000018682)	GET3 (ENSLLEG00000018363)	TNPO2 (ENSLLEG00000017229)	ENSLLEG00000017146	FBXW9 (ENSLLEG00000017029)	DHPS (ENSLLEG00000016722)	WDR83 (ENSLLEG00000016542)	WDR83OS (ENSLLEG00000016451)
Amniota	ANCESTRAL SPECIES	31	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00950000182917.a.b.b	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000164108.a	ENSGT00940000164623.C	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Mammalia	ANCESTRAL SPECIES	47	ENSGT01050000244898.a.a.b	ENSGT00940000154587.a.a	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000163316	ENSGT00940000161237	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000006459	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000003464	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A	ENSGT00940000158362	ENSGT00390000018302	ENSGT00940000159923
Platypus	MODERN SPECIES	9	RAD54L (ENSOANG00000039799)	LRRC41 (ENSOANG00000044307)	ENSOANG00000043609	FAAH (ENSOANG00000039661)	DMBX1 (ENSOANG00000040550)	ENSOANG00000036851	MOB3C (ENSOANG00000047366)	ATPAF1 (ENSOANG00000007256)	ENSOANG00000049254	EFCAB14 (ENSOANG00000047490)	CYP4B1 (ENSOANG00000012347)	ENSOANG00000036059	ENSOANG00000036921	PIK3R3 (ENSOANG00000005917)	MAST2 (ENSOANG00000011786)	ENSOANG00000045416 ##22	IPP (ENSOANG00000011788)	ENSOANG00000011789	GPBP1L1 (ENSOANG00000011790)	ENSOANG00000011791	NASP (ENSOANG00000011792)	AKR1A1 (ENSOANG00000011793)	PRDX1 (ENSOANG00000011794)	MMACHC (ENSOANG00000021591)	ENSOANG00000041792	TESK2 (ENSOANG00000038877)	TOE1 (ENSOANG00000049170)	ENSOANG00000014215	ZSWIM5 (ENSOANG00000009711)	UROD (ENSOANG00000038801)	HECTD3 (ENSOANG00000047677)
Theria	ANCESTRAL SPECIES	29	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00900000141021.b.b	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00900000141021.b.b	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856.b	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a.g
Diprotodontia	ANCESTRAL SPECIES	20	ENSGT00900000141021.b.b	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856.b	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a.g
Diprotodontia_a	ANCESTRAL SPECIES	16	ENSGT00900000141021.b.b	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856.b	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a.g
koala	MODERN SPECIES	58	IER2 (ENSPCIG00000019269)	NACC1 (ENSPCIG00000019270)	TRMT1 (ENSPCIG00000019273)	LYL1 (ENSPCIG00000019276)	NFIX (ENSPCIG00000019280)	ENSPCIG00000033702	ENSPCIG00000019285	RAD23A (ENSPCIG00000019286)	CALR (ENSPCIG00000019290)	FARSA (ENSPCIG00000019294)	ENSPCIG00000019297	GCDH (ENSPCIG00000019299)	ENSPCIG00000014086	DNASE2 (ENSPCIG00000014087)	MAST1 (ENSPCIG00000014093)	ENSPCIG00000014111 ##22	RNASEH2A (ENSPCIG00000014119)	PRDX2 (ENSPCIG00000014122)	JUNB (ENSPCIG00000014125)	HOOK2 (ENSPCIG00000012585)	BEST2 (ENSPCIG00000015279)	GET3 (ENSPCIG00000015293)	TRIR (ENSPCIG00000015300)	ENSPCIG00000015303	TNPO2 (ENSPCIG00000015327)	FBXW9 (ENSPCIG00000015866)	ENSPCIG00000015871	DHPS (ENSPCIG00000015878)	WDR83 (ENSPCIG00000015889)	WDR83OS (ENSPCIG00000015902)	MAN2B1 (ENSPCIG00000015894)
Opossum	MODERN SPECIES	2	ENSMODG00000000627	ENSMODG00000049316	ENSMODG00000029552	ADGRB1 (ENSMODG00000000556)	ENSMODG00000000048	ARC (ENSMODG00000000033)	JRK (ENSMODG00000024367)	THEM6 (ENSMODG00000000042)	ENSMODG00000024365	ENSMODG00000039273	LYPD2 (ENSMODG00000000038)	LYNX1 (ENSMODG00000029659)	ENSMODG00000027533	ENSMODG00000027916	ENSMODG00000000019	ENSMODG00000029040 ##22	ENSMODG00000010616	RNASEH2A (ENSMODG00000006997)	PRDX2 (ENSMODG00000006978)	JUNB (ENSMODG00000044926)	HOOK2 (ENSMODG00000006959)	BEST2 (ENSMODG00000006822)	GET3 (ENSMODG00000006913)	TRIR (ENSMODG00000025628)	ENSMODG00000006894	TNPO2 (ENSMODG00000006888)	FBXW9 (ENSMODG00000006836)	ENSMODG00000044399	ENSMODG00000006807	WDR83 (ENSMODG00000006785)	WDR83OS (ENSMODG00000045969)
Eutheria	ANCESTRAL SPECIES	27	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00390000016735
Atlantogenata	ANCESTRAL SPECIES	41	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a.i.a	ENSGT01030000234638.b.a.a.i.b.a	ENSGT00390000016735
Afrotheria	ANCESTRAL SPECIES	38	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a.i.a	ENSGT01030000234638.b.a.a.i.b.a	ENSGT00390000016735
Afrotheria_a	ANCESTRAL SPECIES	39	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a.i.a	ENSGT01030000234638.b.a.a.i.b.a	ENSGT00390000016735
Elephant	MODERN SPECIES	270	STX10 (ENSLAFG00000029308)	NACC1 (ENSLAFG00000012921)	TRMT1 (ENSLAFG00000014072)	LYL1 (ENSLAFG00000005235)	NFIX (ENSLAFG00000017040)	DAND5 (ENSLAFG00000002928)	GADD45GIP1 (ENSLAFG00000027811)	RAD23A (ENSLAFG00000029782)	CALR (ENSLAFG00000016157)	FARSA (ENSLAFG00000016154)	ENSLAFG00000027765	GCDH (ENSLAFG00000016147)	KLF1 (ENSLAFG00000016145)	DNASE2 (ENSLAFG00000016136)	MAST1 (ENSLAFG00000016119)	RTBDN (ENSLAFG00000016111) ##22	RNASEH2A (ENSLAFG00000015571)	PRDX2 (ENSLAFG00000008526)	JUNB (ENSLAFG00000008530)	HOOK2 (ENSLAFG00000021382)	BEST2 (ENSLAFG00000032080)	GET3 (ENSLAFG00000011727)	TRIR (ENSLAFG00000011724)	TNPO2 (ENSLAFG00000003661)	FBXW9 (ENSLAFG00000026488)	DHPS (ENSLAFG00000027105)	WDR83 (ENSLAFG00000031530)	WDR83OS (ENSLAFG00000032207)	ENSLAFG00000008483	ENSLAFG00000031542	ENSLAFG00000025944
Hyrax	MODERN SPECIES	574								ENSPCAG00000015945	RAD23A (ENSPCAG00000015877)	CALR (ENSPCAG00000015789)	FARSA (ENSPCAG00000015721)	SYCE2 (ENSPCAG00000015680)	GCDH (ENSPCAG00000015614)	KLF1 (ENSPCAG00000015589)	MAST1 (ENSPCAG00000015438)	RTBDN (ENSPCAG00000015367) ##22	RNASEH2A (ENSPCAG00000015319)	PRDX2 (ENSPCAG00000015277)	JUNB (ENSPCAG00000015270)	HOOK2 (ENSPCAG00000015171)	BEST2 (ENSPCAG00000015104)	GET3 (ENSPCAG00000015072)	TRIR (ENSPCAG00000015051)	TNPO2 (ENSPCAG00000014916)	FBXW9 (ENSPCAG00000014854)	WDR83 (ENSPCAG00000014813)	WDR83OS (ENSPCAG00000014783)	MAN2B1 (ENSPCAG00000014647)
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Primates	ANCESTRAL SPECIES	18	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b.v.a	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b.v.a	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000266406	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Hominidae	ANCESTRAL SPECIES		ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b.v.a	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000266406	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b.v.a	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000266406	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b.v.a	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000266406	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Pan	ANCESTRAL SPECIES	14	ENSGT00940000159327	ENSGT00530000063646.b.v.a	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00900000143204.b	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00950000182755.b.a.a.a.a.a.b.d.b
Chimpanzee	MODERN SPECIES	10	NACC1 (ENSPTRG00000010558)	TRMT1 (ENSPTRG00000010557)	LYL1 (ENSPTRG00000049311)	NFIX (ENSPTRG00000010555)	DAND5 (ENSPTRG00000010554)	GADD45GIP1 (ENSPTRG00000010553)	RAD23A (ENSPTRG00000010552)	CALR (ENSPTRG00000010551)	FARSA (ENSPTRG00000010550)	SYCE2 (ENSPTRG00000010549)	ENSPTRG00000050317	GCDH (ENSPTRG00000010548)	KLF1 (ENSPTRG00000010547)	DNASE2 (ENSPTRG00000010546)	MAST1 (ENSPTRG00000010545)	RTBDN (ENSPTRG00000010543) ##22	RNASEH2A (ENSPTRG00000010542)	THSD8 (ENSPTRG00000049528)	PRDX2 (ENSPTRG00000010541)	JUNB (ENSPTRG00000029110)	HOOK2 (ENSPTRG00000010539)	BEST2 (ENSPTRG00000010538)	GET3 (ENSPTRG00000010537)	TRIR (ENSPTRG00000010536)	TNPO2 (ENSPTRG00000010535)	FBXW9 (ENSPTRG00000010534)	DHPS (ENSPTRG00000010533)	WDR83 (ENSPTRG00000010532)	WDR83OS (ENSPTRG00000010531)	MAN2B1 (ENSPTRG00000010530)	ZNF791 (ENSPTRG00000010521)
Bonobo	MODERN SPECIES	10	STX10 (ENSPPAG00000042146)	NACC1 (ENSPPAG00000033614)	ENSPPAG00000031484	LYL1 (ENSPPAG00000028076)	NFIX (ENSPPAG00000027719)	GADD45GIP1 (ENSPPAG00000039356)	RAD23A (ENSPPAG00000016916)	CALR (ENSPPAG00000006666)	FARSA (ENSPPAG00000034266)	SYCE2 (ENSPPAG00000028078)	ENSPPAG00000027273	GCDH (ENSPPAG00000026417)	KLF1 (ENSPPAG00000039322)	DNASE2 (ENSPPAG00000034169)	MAST1 (ENSPPAG00000035621)	RTBDN (ENSPPAG00000025282) ##22	RNASEH2A (ENSPPAG00000028092)	THSD8 (ENSPPAG00000028013)	PRDX2 (ENSPPAG00000034246)	JUNB (ENSPPAG00000024799)	HOOK2 (ENSPPAG00000008477)	BEST2 (ENSPPAG00000036993)	GET3 (ENSPPAG00000042483)	TRIR (ENSPPAG00000023372)	ENSPPAG00000014576	TNPO2 (ENSPPAG00000019494)	FBXW9 (ENSPPAG00000028530)	DHPS (ENSPPAG00000022756)	WDR83 (ENSPPAG00000038802)	WDR83OS (ENSPPAG00000014278)	MAN2B1 (ENSPPAG00000031820)
Human	MODERN SPECIES	10	STX10 (ENSG00000104915)	NACC1 (ENSG00000160877)	TRMT1 (ENSG00000104907)	LYL1 (ENSG00000104903)	NFIX (ENSG00000008441)	DAND5 (ENSG00000179284)	GADD45GIP1 (ENSG00000179271)	RAD23A (ENSG00000179262)	CALR (ENSG00000179218)	FARSA (ENSG00000179115)	SYCE2 (ENSG00000161860)	GCDH (ENSG00000105607)	KLF1 (ENSG00000105610)	DNASE2 (ENSG00000105612)	MAST1 (ENSG00000105613)	RTBDN (ENSG00000132026) ##22	RNASEH2A (ENSG00000104889)	THSD8 (ENSG00000284491)	PRDX2 (ENSG00000167815)	JUNB (ENSG00000171223)	HOOK2 (ENSG00000095066)	BEST2 (ENSG00000039987)	GET3 (ENSG00000198356)	TRIR (ENSG00000123144)	TNPO2 (ENSG00000105576)	FBXW9 (ENSG00000132004)	GNG14 (ENSG00000283980)	DHPS (ENSG00000095059)	WDR83OS (ENSG00000105583)	WDR83 (ENSG00000123154)	ENSG00000269590
Gorilla	MODERN SPECIES	10	STX10 (ENSGGOG00000009480)	NACC1 (ENSGGOG00000022388)	TRMT1 (ENSGGOG00000014007)	LYL1 (ENSGGOG00000023512)	NFIX (ENSGGOG00000001831)	DAND5 (ENSGGOG00000009692)	GADD45GIP1 (ENSGGOG00000022807)	RAD23A (ENSGGOG00000023403)	CALR (ENSGGOG00000016129)	FARSA (ENSGGOG00000003418)	ENSGGOG00000003416	GCDH (ENSGGOG00000003411)	KLF1 (ENSGGOG00000003408)	DNASE2 (ENSGGOG00000003402)	MAST1 (ENSGGOG00000003390)	RTBDN (ENSGGOG00000001903) ##22	RNASEH2A (ENSGGOG00000005846)	THSD8 (ENSGGOG00000037364)	PRDX2 (ENSGGOG00000025089)	JUNB (ENSGGOG00000005566)	HOOK2 (ENSGGOG00000005558)	BEST2 (ENSGGOG00000005549)	ASNA1 (ENSGGOG00000005545)	TRIR (ENSGGOG00000005540)	ENSGGOG00000013442	FBXW9 (ENSGGOG00000013425)	DHPS (ENSGGOG00000013390)	WDR83OS (ENSGGOG00000013381)	WDR83 (ENSGGOG00000013383)	MAN2B1 (ENSGGOG00000013365)	ENSGGOG00000043721
Orangutan	MODERN SPECIES	10	IER2 (ENSPPYG00000009625)	STX10 (ENSPPYG00000009624)	NACC1 (ENSPPYG00000009623)	TRMT1 (ENSPPYG00000009622)	LYL1 (ENSPPYG00000009621)	ENSPPYG00000009620	DAND5 (ENSPPYG00000009619)	GADD45GIP1 (ENSPPYG00000038376)	RAD23A (ENSPPYG00000009617)	CALR (ENSPPYG00000009616)	FARSA (ENSPPYG00000009615)	GCDH (ENSPPYG00000009613)	KLF1 (ENSPPYG00000009612)	DNASE2 (ENSPPYG00000009611)	MAST1 (ENSPPYG00000009610)	ENSPPYG00000009609 ##22	RNASEH2A (ENSPPYG00000009608)	THSD8 (ENSPPYG00000035108)	PRDX2 (ENSPPYG00000009607)	JUNB (ENSPPYG00000034415)	HOOK2 (ENSPPYG00000009606)	BEST2 (ENSPPYG00000009605)	GET3 (ENSPPYG00000009604)	TRIR (ENSPPYG00000009603)	TNPO2 (ENSPPYG00000009602)	FBXW9 (ENSPPYG00000009601)	DHPS (ENSPPYG00000009600)	WDR83 (ENSPPYG00000009599)	WDR83OS (ENSPPYG00000009598)	MAN2B1 (ENSPPYG00000009597)	ZNF791 (ENSPPYG00000009596)
Gibbon	MODERN SPECIES		ENSNLEG00000013019	LYL1 (ENSNLEG00000013010)	NFIX (ENSNLEG00000012980)	DAND5 (ENSNLEG00000012978)	GADD45GIP1 (ENSNLEG00000012973)	RAD23A (ENSNLEG00000012969)	CALR (ENSNLEG00000012958)	ENSNLEG00000012957	FARSA (ENSNLEG00000012899)	ENSNLEG00000034095	GCDH (ENSNLEG00000012871)	ENSNLEG00000029024	KLF1 (ENSNLEG00000012868)	DNASE2 (ENSNLEG00000012861)	MAST1 (ENSNLEG00000012834)	ENSNLEG00000012830 ##22	RNASEH2A (ENSNLEG00000012806)	PRDX2 (ENSNLEG00000012800)	JUNB (ENSNLEG00000012796)	ENSNLEG00000012793	TRIR (ENSNLEG00000033688)	TNPO2 (ENSNLEG00000012758)	FBXW9 (ENSNLEG00000012752)	DHPS (ENSNLEG00000012722)	WDR83 (ENSNLEG00000012710)	WDR83OS (ENSNLEG00000012705)	MAN2B1 (ENSNLEG00000012695)	ZNF791 (ENSNLEG00000012694)	ZNF490 (ENSNLEG00000012691)	ZNF564 (ENSNLEG00000012688)	ZNF709 (ENSNLEG00000036256)
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b.v.a	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b.v.a	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b.v.a	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Macaca	ANCESTRAL SPECIES	21	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b.v.a	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00950000182755.b.a.a.a.a.a.b.d.b
Pig-tailed macaque	MODERN SPECIES	76	STX10 (ENSMNEG00000039402)	NACC1 (ENSMNEG00000001897)	TRMT1 (ENSMNEG00000037867)	LYL1 (ENSMNEG00000013370)	NFIX (ENSMNEG00000032823)	DAND5 (ENSMNEG00000040891)	GADD45GIP1 (ENSMNEG00000033121)	RAD23A (ENSMNEG00000042153)	CALR (ENSMNEG00000034740)	FARSA (ENSMNEG00000043866)	SYCE2 (ENSMNEG00000032767)	GCDH (ENSMNEG00000035137)	KLF1 (ENSMNEG00000030783)	DNASE2 (ENSMNEG00000038975)	MAST1 (ENSMNEG00000038625)	RTBDN (ENSMNEG00000031687) ##22	RNASEH2A (ENSMNEG00000033054)	PRDX2 (ENSMNEG00000042230)	JUNB (ENSMNEG00000006142)	HOOK2 (ENSMNEG00000006128)	BEST2 (ENSMNEG00000043730)	GET3 (ENSMNEG00000028577)	TRIR (ENSMNEG00000007751)	TNPO2 (ENSMNEG00000041024)	FBXW9 (ENSMNEG00000039654)	ENSMNEG00000042372	DHPS (ENSMNEG00000044271)	WDR83 (ENSMNEG00000045547)	WDR83OS (ENSMNEG00000045544)	MAN2B1 (ENSMNEG00000045549)	ZNF791 (ENSMNEG00000045545)
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000156518.C	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b.v.a	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828.o.b.b.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT00390000008063	ENSGT00940000159016	ENSGT01030000234638.b.a.a	ENSGT00950000182755.b.a.a.a.a.a.b.d.b	ENSGT00940000164491	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.a.b.a.b.b.b.a.b.a.a
Crab-eating macaque	MODERN SPECIES	10	STX10 (ENSMFAG00000039740)	NACC1 (ENSMFAG00000036952)	ENSMFAG00000047628	TRMT1 (ENSMFAG00000033143)	LYL1 (ENSMFAG00000032986)	NFIX (ENSMFAG00000038849)	DAND5 (ENSMFAG00000033697)	GADD45GIP1 (ENSMFAG00000048260)	RAD23A (ENSMFAG00000003404)	CALR (ENSMFAG00000040740)	FARSA (ENSMFAG00000030595)	GCDH (ENSMFAG00000003761)	KLF1 (ENSMFAG00000044883)	DNASE2 (ENSMFAG00000003665)	MAST1 (ENSMFAG00000041128)	RTBDN (ENSMFAG00000038313) ##22	RNASEH2A (ENSMFAG00000002011)	ENSMFAG00000031614	ENSMFAG00000052456	MAN2B1 (ENSMFAG00000042986)	ZNF791 (ENSMFAG00000036181)	ENSMFAG00000049717	ZNF490 (ENSMFAG00000031592)	ENSMFAG00000061912	ZNF799 (ENSMFAG00000020521)	ENSMFAG00000034105	ENSMFAG00000001303	ZNF44 (ENSMFAG00000043810)	ENSMFAG00000064789	ENSMFAG00000032338	ENSMFAG00000063908
Rhesus	MODERN SPECIES	10	CACNA1A (ENSMMUG00000003555)	STX10 (ENSMMUG00000011427)	NACC1 (ENSMMUG00000017971)	TRMT1 (ENSMMUG00000001167)	LYL1 (ENSMMUG00000001166)	NFIX (ENSMMUG00000019292)	DAND5 (ENSMMUG00000063314)	GADD45GIP1 (ENSMMUG00000042251)	RAD23A (ENSMMUG00000004393)	CALR (ENSMMUG00000004392)	FARSA (ENSMMUG00000004390)	GCDH (ENSMMUG00000007043)	KLF1 (ENSMMUG00000011230)	DNASE2 (ENSMMUG00000028866)	MAST1 (ENSMMUG00000008740)	RTBDN (ENSMMUG00000007322) ##22	RNASEH2A (ENSMMUG00000045010)	PRDX2 (ENSMMUG00000005689)	JUNB (ENSMMUG00000005688)	HOOK2 (ENSMMUG00000005686)	BEST2 (ENSMMUG00000063236)	GET3 (ENSMMUG00000006275)	TRIR (ENSMMUG00000006274)	TNPO2 (ENSMMUG00000005684)	FBXW9 (ENSMMUG00000016870)	DHPS (ENSMMUG00000016869)	WDR83 (ENSMMUG00000016868)	WDR83OS (ENSMMUG00000016863)	ZNF791 (ENSMMUG00000016862)	ZNF490 (ENSMMUG00000016860)	ENSMMUG00000058614
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b.v.a	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Olive baboon	MODERN SPECIES	12	IER2 (ENSPANG00000014006)	STX10 (ENSPANG00000012122)	NACC1 (ENSPANG00000004447)	TRMT1 (ENSPANG00000009247)	LYL1 (ENSPANG00000014670)	NFIX (ENSPANG00000018992)	GADD45GIP1 (ENSPANG00000009045)	RAD23A (ENSPANG00000014671)	CALR (ENSPANG00000005597)	FARSA (ENSPANG00000010978)	SYCE2 (ENSPANG00000001632)	GCDH (ENSPANG00000007728)	KLF1 (ENSPANG00000033071)	DNASE2 (ENSPANG00000049574)	MAST1 (ENSPANG00000015630)	RTBDN (ENSPANG00000015629) ##22	RNASEH2A (ENSPANG00000034495)	THSD8 (ENSPANG00000032212)	PRDX2 (ENSPANG00000010732)	JUNB (ENSPANG00000018727)	HOOK2 (ENSPANG00000014672)	BEST2 (ENSPANG00000022682)	GET3 (ENSPANG00000017713)	TRIR (ENSPANG00000004448)	TNPO2 (ENSPANG00000016857)	FBXW9 (ENSPANG00000050930)	DHPS (ENSPANG00000011701)	WDR83 (ENSPANG00000010733)	WDR83OS (ENSPANG00000038509)	MAN2B1 (ENSPANG00000017977)	ZNF791 (ENSPANG00000005118)
Cercopithecinae_d	ANCESTRAL SPECIES	8	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b.v.a	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Drill	MODERN SPECIES	1150	NACC1 (ENSMLEG00000030829)	TRMT1 (ENSMLEG00000016142)	LYL1 (ENSMLEG00000040101)	NFIX (ENSMLEG00000009460)	DAND5 (ENSMLEG00000039027)	GADD45GIP1 (ENSMLEG00000026252)	RAD23A (ENSMLEG00000025874)	CALR (ENSMLEG00000043015)	FARSA (ENSMLEG00000029157)	SYCE2 (ENSMLEG00000040081)	GCDH (ENSMLEG00000034975)	ENSMLEG00000022275	KLF1 (ENSMLEG00000029486)	DNASE2 (ENSMLEG00000042329)	ENSMLEG00000014873	RTBDN (ENSMLEG00000029058) ##22	RNASEH2A (ENSMLEG00000043654)	THSD8 (ENSMLEG00000031315)	PRDX2 (ENSMLEG00000007227)	JUNB (ENSMLEG00000002218)	HOOK2 (ENSMLEG00000042169)	BEST2 (ENSMLEG00000036400)	GET3 (ENSMLEG00000042440)	TNPO2 (ENSMLEG00000018391)	FBXW9 (ENSMLEG00000036977)	ENSMLEG00000028807	DHPS (ENSMLEG00000039380)	WDR83 (ENSMLEG00000006025)	WDR83OS (ENSMLEG00000030207)	MAN2B1 (ENSMLEG00000033102)	ZNF791 (ENSMLEG00000034449)
Sooty mangabey	MODERN SPECIES	347	STX10 (ENSCATG00000030837)	NACC1 (ENSCATG00000035045)	TRMT1 (ENSCATG00000039850)	LYL1 (ENSCATG00000044487)	NFIX (ENSCATG00000043066)	DAND5 (ENSCATG00000043902)	GADD45GIP1 (ENSCATG00000030476)	RAD23A (ENSCATG00000004423)	CALR (ENSCATG00000033446)	ENSCATG00000024201	SYCE2 (ENSCATG00000041610)	GCDH (ENSCATG00000027594)	KLF1 (ENSCATG00000043665)	DNASE2 (ENSCATG00000039766)	MAST1 (ENSCATG00000034930)	RTBDN (ENSCATG00000043279) ##22	RNASEH2A (ENSCATG00000029609)	PRDX2 (ENSCATG00000030663)	JUNB (ENSCATG00000021976)	HOOK2 (ENSCATG00000035441)	BEST2 (ENSCATG00000018527)	GET3 (ENSCATG00000010766)	TRIR (ENSCATG00000041032)	TNPO2 (ENSCATG00000042599)	FBXW9 (ENSCATG00000036324)	ENSCATG00000036205	ENSCATG00000037007	WDR83 (ENSCATG00000035388)	WDR83OS (ENSCATG00000036611)	MAN2B1 (ENSCATG00000042104)	ZNF791 (ENSCATG00000041735)
Vervet Monkey	MODERN SPECIES	25	STX10 (ENSCSAG00000006490)	NACC1 (ENSCSAG00000006493)	TRMT1 (ENSCSAG00000006500)	LYL1 (ENSCSAG00000006504)	NFIX (ENSCSAG00000006510)	DAND5 (ENSCSAG00000006514)	GADD45GIP1 (ENSCSAG00000006518)	RAD23A (ENSCSAG00000006523)	CALR (ENSCSAG00000006527)	FARSA (ENSCSAG00000006530)	SYCE2 (ENSCSAG00000006533)	GCDH (ENSCSAG00000006539)	KLF1 (ENSCSAG00000006545)	DNASE2 (ENSCSAG00000006550)	MAST1 (ENSCSAG00000006558)	RTBDN (ENSCSAG00000006564) ##22	RNASEH2A (ENSCSAG00000006567)	PRDX2 (ENSCSAG00000006571)	JUNB (ENSCSAG00000018838)	HOOK2 (ENSCSAG00000006578)	BEST2 (ENSCSAG00000006582)	GET3 (ENSCSAG00000006585)	TRIR (ENSCSAG00000006588)	TNPO2 (ENSCSAG00000006597)	FBXW9 (ENSCSAG00000006605)	DHPS (ENSCSAG00000006608)	WDR83 (ENSCSAG00000006611)	WDR83OS (ENSCSAG00000006616)	MAN2B1 (ENSCSAG00000006628)	ZNF791 (ENSCSAG00000006632)	ZNF490 (ENSCSAG00000006639)
Rhinopithecus	ANCESTRAL SPECIES		ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b.v.a	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Golden snub-nosed monkey	MODERN SPECIES	975	STX10 (ENSRROG00000040598)	NACC1 (ENSRROG00000040733)	TRMT1 (ENSRROG00000028599)	LYL1 (ENSRROG00000030934)	NFIX (ENSRROG00000033828)	DAND5 (ENSRROG00000032903)	GADD45GIP1 (ENSRROG00000032590)	RAD23A (ENSRROG00000040220)	CALR (ENSRROG00000044583)	FARSA (ENSRROG00000040046)	SYCE2 (ENSRROG00000032909)	GCDH (ENSRROG00000044762)	KLF1 (ENSRROG00000041432)	DNASE2 (ENSRROG00000029927)	MAST1 (ENSRROG00000042288)	RTBDN (ENSRROG00000035994) ##22	RNASEH2A (ENSRROG00000043799)	THSD8 (ENSRROG00000036021)	PRDX2 (ENSRROG00000035034)	JUNB (ENSRROG00000025586)	HOOK2 (ENSRROG00000026930)	BEST2 (ENSRROG00000036441)	GET3 (ENSRROG00000034020)	TRIR (ENSRROG00000042115)	TNPO2 (ENSRROG00000040402)	FBXW9 (ENSRROG00000041458)	ENSRROG00000041417	DHPS (ENSRROG00000040289)	WDR83 (ENSRROG00000017599)	WDR83OS (ENSRROG00000035299)	MAN2B1 (ENSRROG00000039902)
Black snub-nosed monkey	MODERN SPECIES	1206	STX10 (ENSRBIG00000035960)	NACC1 (ENSRBIG00000038786)	TRMT1 (ENSRBIG00000038324)	LYL1 (ENSRBIG00000000841)	NFIX (ENSRBIG00000044362)	DAND5 (ENSRBIG00000042172)	GADD45GIP1 (ENSRBIG00000028947)	RAD23A (ENSRBIG00000039630)	CALR (ENSRBIG00000038580)	FARSA (ENSRBIG00000025585)	SYCE2 (ENSRBIG00000037872)	GCDH (ENSRBIG00000031343)	KLF1 (ENSRBIG00000036232)	ENSRBIG00000038978	MAST1 (ENSRBIG00000036674)	RTBDN (ENSRBIG00000033268) ##22
Platyrrhini	ANCESTRAL SPECIES	16	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121.l	ENSGT00390000002121.k
Cebidae	ANCESTRAL SPECIES	20	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121.k	ENSGT01030000234638.b.a.a
Marmoset	MODERN SPECIES	14	STX10 (ENSCJAG00000004519)	NACC1 (ENSCJAG00000043018)	TRMT1 (ENSCJAG00000004566)	LYL1 (ENSCJAG00000004598)	NFIX (ENSCJAG00000004603)	DAND5 (ENSCJAG00000004639)	GADD45GIP1 (ENSCJAG00000004645)	ENSCJAG00000004494	CALR (ENSCJAG00000004650)	FARSA (ENSCJAG00000004686)	SYCE2 (ENSCJAG00000004733)	GCDH (ENSCJAG00000004741)	KLF1 (ENSCJAG00000004762)	DNASE2 (ENSCJAG00000004764)	MAST1 (ENSCJAG00000004772)	RTBDN (ENSCJAG00000004863) ##22	RNASEH2A (ENSCJAG00000004873)	PRDX2 (ENSCJAG00000004882)	JUNB (ENSCJAG00000078765)	HOOK2 (ENSCJAG00000004942)	ENSCJAG00000084405	TRIR (ENSCJAG00000005083)	TNPO2 (ENSCJAG00000005096)	FBXW9 (ENSCJAG00000005225)	ENSCJAG00000045360	DHPS (ENSCJAG00000005244)	WDR83 (ENSCJAG00000005272)	ENSCJAG00000038528	MAN2B1 (ENSCJAG00000005297)	ZNF791 (ENSCJAG00000080833)	ZNF490 (ENSCJAG00000005408)
Cebidae_a	ANCESTRAL SPECIES	9	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.o.b	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121.l	ENSGT00390000002121.k
Capuchin	MODERN SPECIES	234	STX10 (ENSCCAG00000035795)	NACC1 (ENSCCAG00000033562)	TRMT1 (ENSCCAG00000022263)	LYL1 (ENSCCAG00000036697)	NFIX (ENSCCAG00000022096)	DAND5 (ENSCCAG00000018636)	GADD45GIP1 (ENSCCAG00000036734)	RAD23A (ENSCCAG00000030313)	CALR (ENSCCAG00000000456)	FARSA (ENSCCAG00000028176)	SYCE2 (ENSCCAG00000033990)	GCDH (ENSCCAG00000027806)	KLF1 (ENSCCAG00000022356)	ENSCCAG00000035903	MAST1 (ENSCCAG00000036093)	RTBDN (ENSCCAG00000023878) ##22	RNASEH2A (ENSCCAG00000030453)	THSD8 (ENSCCAG00000030346)	PRDX2 (ENSCCAG00000013200)	JUNB (ENSCCAG00000020250)	HOOK2 (ENSCCAG00000001971)	BEST2 (ENSCCAG00000028789)	ASNA1 (ENSCCAG00000036628)	TRIR (ENSCCAG00000034041)	TNPO2 (ENSCCAG00000024574)	FBXW9 (ENSCCAG00000027128)	ENSCCAG00000022190	DHPS (ENSCCAG00000020342)	WDR83 (ENSCCAG00000034478)	WDR83OS (ENSCCAG00000027678)	MAN2B1 (ENSCCAG00000032165)
Bolivian squirrel monkey	MODERN SPECIES	192	STX10 (ENSSBOG00000028486)	NACC1 (ENSSBOG00000029763)	TRMT1 (ENSSBOG00000028861)	LYL1 (ENSSBOG00000035321)	NFIX (ENSSBOG00000036002)	DAND5 (ENSSBOG00000027807)	GADD45GIP1 (ENSSBOG00000022567)	RAD23A (ENSSBOG00000023231)	CALR (ENSSBOG00000019002)	FARSA (ENSSBOG00000031362)	SYCE2 (ENSSBOG00000022841)	GCDH (ENSSBOG00000021506)	KLF1 (ENSSBOG00000034347)	DNASE2 (ENSSBOG00000011199)	MAST1 (ENSSBOG00000020496)	RTBDN (ENSSBOG00000023703) ##22	RNASEH2A (ENSSBOG00000033164)	THSD8 (ENSSBOG00000036213)	PRDX2 (ENSSBOG00000034677)	JUNB (ENSSBOG00000019470)	HOOK2 (ENSSBOG00000025848)	BEST2 (ENSSBOG00000025207)	GET3 (ENSSBOG00000034152)	TRIR (ENSSBOG00000032465)	TNPO2 (ENSSBOG00000019551)	FBXW9 (ENSSBOG00000029356)	ENSSBOG00000029032	DHPS (ENSSBOG00000033113)	WDR83 (ENSSBOG00000030461)	WDR83OS (ENSSBOG00000029116)	MAN2B1 (ENSSBOG00000025631)
Mas night monkey	MODERN SPECIES	937	STX10 (ENSANAG00000037876)	NACC1 (ENSANAG00000037555)	TRMT1 (ENSANAG00000023016)	LYL1 (ENSANAG00000037857)	NFIX (ENSANAG00000009093)	DAND5 (ENSANAG00000022153)	GADD45GIP1 (ENSANAG00000021876)	RAD23A (ENSANAG00000037597)	CALR (ENSANAG00000021327)	FARSA (ENSANAG00000037420)	SYCE2 (ENSANAG00000036720)	KLF1 (ENSANAG00000036457)	GCDH (ENSANAG00000036490)	DNASE2 (ENSANAG00000021770)	MAST1 (ENSANAG00000020839)	RTBDN (ENSANAG00000037449) ##22	RNASEH2A (ENSANAG00000037932)	THSD8 (ENSANAG00000035604)	PRDX2 (ENSANAG00000026462)	JUNB (ENSANAG00000018377)	HOOK2 (ENSANAG00000003110)	BEST2 (ENSANAG00000037461)	GET3 (ENSANAG00000037482)	TRIR (ENSANAG00000036223)	TNPO2 (ENSANAG00000036645)	FBXW9 (ENSANAG00000033814)	ENSANAG00000033935	DHPS (ENSANAG00000035528)	MAN2B1 (ENSANAG00000037791)	ZNF791 (ENSANAG00000035071)	ZNF490 (ENSANAG00000035599)
Tarsier	MODERN SPECIES	1688					NFIX (ENSTSYG00000007548)	DAND5 (ENSTSYG00000030904)	GADD45GIP1 (ENSTSYG00000033228)	RAD23A (ENSTSYG00000007634)	CALR (ENSTSYG00000033515)	FARSA (ENSTSYG00000002595)	SYCE2 (ENSTSYG00000036192)	GCDH (ENSTSYG00000003920)	KLF1 (ENSTSYG00000029943)	DNASE2 (ENSTSYG00000028119)	MAST1 (ENSTSYG00000003492)	RTBDN (ENSTSYG00000002450) ##22	RNASEH2A (ENSTSYG00000025418)
Strepsirrhini	ANCESTRAL SPECIES	28	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Lemuriformes	ANCESTRAL SPECIES	35	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Mouse lemur	MODERN SPECIES	16	STX10 (ENSMICG00000000814)	ENSMICG00000035600	TRMT1 (ENSMICG00000000793)	LYL1 (ENSMICG00000045046)	NFIX (ENSMICG00000000785)	DAND5 (ENSMICG00000046835)	GADD45GIP1 (ENSMICG00000038609)	RAD23A (ENSMICG00000016290)	CALR (ENSMICG00000016284)	FARSA (ENSMICG00000016272)	GCDH (ENSMICG00000016264)	SYCE2 (ENSMICG00000016268)	KLF1 (ENSMICG00000016260)	ENSMICG00000016255	MAST1 (ENSMICG00000016221)	RTBDN (ENSMICG00000028676) ##22	RNASEH2A (ENSMICG00000016430)	PRDX2 (ENSMICG00000016211)	JUNB (ENSMICG00000027217)	HOOK2 (ENSMICG00000016176)	BEST2 (ENSMICG00000037638)	GET3 (ENSMICG00000016170)	TRIR (ENSMICG00000027484)	TNPO2 (ENSMICG00000016153)	FBXW9 (ENSMICG00000016149)	ENSMICG00000042997	DHPS (ENSMICG00000005368)	WDR83 (ENSMICG00000045845)	WDR83OS (ENSMICG00000041694)	MAN2B1 (ENSMICG00000030973)	ZNF791 (ENSMICG00000001543)
Lemuriformes_a	ANCESTRAL SPECIES	25	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Coquerels sifaka	MODERN SPECIES	226	STX10 (ENSPCOG00000027677)	NACC1 (ENSPCOG00000028443)	TRMT1 (ENSPCOG00000008653)	LYL1 (ENSPCOG00000027352)	NFIX (ENSPCOG00000015718)	DAND5 (ENSPCOG00000014620)	GADD45GIP1 (ENSPCOG00000008740)	RAD23A (ENSPCOG00000023819)	CALR (ENSPCOG00000027189)	FARSA (ENSPCOG00000014412)	SYCE2 (ENSPCOG00000023390)	GCDH (ENSPCOG00000027495)	KLF1 (ENSPCOG00000024775)	DNASE2 (ENSPCOG00000018438)	MAST1 (ENSPCOG00000010146)	RTBDN (ENSPCOG00000019035) ##22	RNASEH2A (ENSPCOG00000003686)	THSD8 (ENSPCOG00000027163)	PRDX2 (ENSPCOG00000023441)	JUNB (ENSPCOG00000013392)	HOOK2 (ENSPCOG00000027579)	BEST2 (ENSPCOG00000025129)	GET3 (ENSPCOG00000027722)	TRIR (ENSPCOG00000027525)	TNPO2 (ENSPCOG00000018386)	FBXW9 (ENSPCOG00000024449)	ENSPCOG00000028753	DHPS (ENSPCOG00000028759)	WDR83 (ENSPCOG00000019048)	WDR83OS (ENSPCOG00000024280)	MAN2B1 (ENSPCOG00000018811)
Greater bamboo lemur	MODERN SPECIES	2602																RTBDN (ENSPSMG00000003755) ##22	RNASEH2A (ENSPSMG00000003775)	THSD8 (ENSPSMG00000003781)	ENSPSMG00000003806
Bushbaby	MODERN SPECIES	242	IER2 (ENSOGAG00000032686)	STX10 (ENSOGAG00000025310)	NACC1 (ENSOGAG00000031864)	TRMT1 (ENSOGAG00000025576)	LYL1 (ENSOGAG00000033339)	NFIX (ENSOGAG00000017133)	DAND5 (ENSOGAG00000026803)	GADD45GIP1 (ENSOGAG00000028560)	RAD23A (ENSOGAG00000007693)	CALR (ENSOGAG00000012249)	FARSA (ENSOGAG00000012243)	GCDH (ENSOGAG00000012240)	KLF1 (ENSOGAG00000025438)	DNASE2 (ENSOGAG00000034724)	MAST1 (ENSOGAG00000012223)	RTBDN (ENSOGAG00000012219) ##22	RNASEH2A (ENSOGAG00000012214)	ENSOGAG00000024998	JUNB (ENSOGAG00000025664)	HOOK2 (ENSOGAG00000028323)	BEST2 (ENSOGAG00000026961)	GET3 (ENSOGAG00000012205)	TRIR (ENSOGAG00000012203)	TNPO2 (ENSOGAG00000012192)	FBXW9 (ENSOGAG00000012187)	DHPS (ENSOGAG00000012805)	WDR83 (ENSOGAG00000012803)	WDR83OS (ENSOGAG00000012802)	MAN2B1 (ENSOGAG00000015392)	ZNF791 (ENSOGAG00000015391)	ENSOGAG00000005003
Euarchontoglires_A	ANCESTRAL SPECIES	20	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Glires	ANCESTRAL SPECIES	21	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Rodentia	ANCESTRAL SPECIES	17	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Rodentia_B	ANCESTRAL SPECIES	43	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Myomorpha	ANCESTRAL SPECIES	52	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Muroidea	ANCESTRAL SPECIES	60	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Northern American deer mouse	MODERN SPECIES	18	Nacc1 (ENSPEMG00000003314)	Trmt1 (ENSPEMG00000016247)	Lyl1 (ENSPEMG00000026641)	ENSPEMG00000029305	Nfix (ENSPEMG00000011765)	Dand5 (ENSPEMG00000017061)	Gadd45gip1 (ENSPEMG00000011904)	Rad23a (ENSPEMG00000006140)	Calr (ENSPEMG00000001949)	Farsa (ENSPEMG00000012560)	Syce2 (ENSPEMG00000016357)	Gcdh (ENSPEMG00000009103)	Klf1 (ENSPEMG00000017635)	Dnase2a (ENSPEMG00000000677)	Mast1 (ENSPEMG00000010588)	Rtbdn (ENSPEMG00000024999) ##22	Rnaseh2a (ENSPEMG00000018009)	Gm49661 (ENSPEMG00000029668)	Prdx2 (ENSPEMG00000000538)	Junb (ENSPEMG00000006961)	Hook2 (ENSPEMG00000009962)	Best2 (ENSPEMG00000015867)	Get3 (ENSPEMG00000016543)	Trir (ENSPEMG00000016449)	Tnpo2 (ENSPEMG00000018702)	Fbxw9 (ENSPEMG00000017063)	Gng14 (ENSPEMG00000029438)	Dhps (ENSPEMG00000019124)	Wdr83 (ENSPEMG00000014294)	Wdr83os (ENSPEMG00000025345)	ENSPEMG00000025750
Prairie vole	MODERN SPECIES	98	Cd209b (ENSMOCG00000014532)	Cd209e (ENSMOCG00000011986)	Cd209a (ENSMOCG00000013815)	Clec4g (ENSMOCG00000007606)	ENSMOCG00000009634	Dand5 (ENSMOCG00000006477)	Gadd45gip1 (ENSMOCG00000017223)	Rad23a (ENSMOCG00000008410)	Calr (ENSMOCG00000003128)	Farsa (ENSMOCG00000011399)	Syce2 (ENSMOCG00000016839)	Gcdh (ENSMOCG00000005123)	Klf1 (ENSMOCG00000015689)	Dnase2a (ENSMOCG00000001379)	Mast1 (ENSMOCG00000015813)	Rtbdn (ENSMOCG00000002540) ##22	Rnaseh2a (ENSMOCG00000017408)	ENSMOCG00000020752	Junb (ENSMOCG00000003238)	Hook2 (ENSMOCG00000014258)	Best2 (ENSMOCG00000006958)	Get3 (ENSMOCG00000002658)	Trir (ENSMOCG00000009371)	Tnpo2 (ENSMOCG00000016489)	ENSMOCG00000003557	Gng14 (ENSMOCG00000002530)	Dhps (ENSMOCG00000020268)	Wdr83 (ENSMOCG00000015572)	Wdr83os (ENSMOCG00000000084)	Man2b1 (ENSMOCG00000019337)	ENSMOCG00000006321
Murinae	ANCESTRAL SPECIES	15	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856.d	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828.h	ENSGT00870000137755	ENSGT00940000155828.g.a	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121
Mus	ANCESTRAL SPECIES	6	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856.d	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828.h	ENSGT00870000137755	ENSGT00940000155828.g.a	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121
Mus_A	ANCESTRAL SPECIES	8	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856.d	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.g.a	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121.i	ENSGT01030000234638.b.a.a
Mus_B	ANCESTRAL SPECIES	6	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856.d	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828.g.a	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121.i	ENSGT01030000234638.b.a.a
Mus_C	ANCESTRAL SPECIES	5	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00940000157455.z	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856.d	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828.h	ENSGT00870000137755	ENSGT00940000155828.g.a	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121.i
Steppe mouse	MODERN SPECIES	2800	Trmt1 (ENSMSIG00000014300)	Lyl1 (ENSMSIG00000014285)	ENSMSIG00000014268	Nfix (ENSMSIG00000014176)	Dand5 (ENSMSIG00000014166)	Gadd45gip1 (ENSMSIG00000014154)	Rad23a (ENSMSIG00000014128)	ENSMSIG00000014123	ENSMSIG00000014114	Farsa (ENSMSIG00000014035)	Syce2 (ENSMSIG00000013998)	Gcdh (ENSMSIG00000013969)	Klf1 (ENSMSIG00000013957)	Dnase2a (ENSMSIG00000013905)	ENSMSIG00000013886	Rtbdn (ENSMSIG00000013845) ##22	Rnaseh2a (ENSMSIG00000013788)	Gm49661 (ENSMSIG00000013769)	Prdx2 (ENSMSIG00000013681)	Junb (ENSMSIG00000013671)	Hook2 (ENSMSIG00000013603)	Get3 (ENSMSIG00000013568)	Trir (ENSMSIG00000013540)	Tnpo2 (ENSMSIG00000013409)	Fbxw9 (ENSMSIG00000013376)	Gng14 (ENSMSIG00000013367)	Dhps (ENSMSIG00000013355)	Wdr83 (ENSMSIG00000013337)	Wdr83os (ENSMSIG00000013323)	Man2b1 (ENSMSIG00000013254)	ENSMSIG00000013245
spretus	MODERN SPECIES	17	Trmt1 (MGP_SPRETEiJ_G0032422)	Nfix (MGP_SPRETEiJ_G0032423)	Lyl1 (MGP_SPRETEiJ_G0032424)	MGP_SPRETEiJ_G0032425	Dand5 (MGP_SPRETEiJ_G0032426)	Gadd45gip1 (MGP_SPRETEiJ_G0032427)	Rad23a (MGP_SPRETEiJ_G0032428)	Calr (MGP_SPRETEiJ_G0032429)	MGP_SPRETEiJ_G0032430	Farsa (MGP_SPRETEiJ_G0032431)	Syce2 (MGP_SPRETEiJ_G0032432)	Gcdh (MGP_SPRETEiJ_G0032433)	Klf1 (MGP_SPRETEiJ_G0032434)	Dnase2a (MGP_SPRETEiJ_G0032435)	Mast1 (MGP_SPRETEiJ_G0032436)	Rtbdn (MGP_SPRETEiJ_G0032437) ##22	Rnaseh2a (MGP_SPRETEiJ_G0032438)	MGP_SPRETEiJ_G0032439	Junb (MGP_SPRETEiJ_G0032440)	Hook2 (MGP_SPRETEiJ_G0032441)	Best2 (MGP_SPRETEiJ_G0032442)	Get3 (MGP_SPRETEiJ_G0032443)	Trir (MGP_SPRETEiJ_G0032444)	Tnpo2 (MGP_SPRETEiJ_G0032445)	Fbxw9 (MGP_SPRETEiJ_G0032446)	Gng14 (MGP_SPRETEiJ_G0032447)	Dhps (MGP_SPRETEiJ_G0032448)	Wdr83 (MGP_SPRETEiJ_G0032449)	Wdr83os (MGP_SPRETEiJ_G0032450)	Man2b1 (MGP_SPRETEiJ_G0032451)	Zfp791 (MGP_SPRETEiJ_G0032452)
Mouse	MODERN SPECIES	17	Ier2 (ENSMUSG00000053560)	Nacc1 (ENSMUSG00000001910)	Trmt1 (ENSMUSG00000001909)	Nfix (ENSMUSG00000001911)	Lyl1 (ENSMUSG00000034041)	Dand5 (ENSMUSG00000053226)	Gadd45gip1 (ENSMUSG00000033751)	Rad23a (ENSMUSG00000003813)	Calr (ENSMUSG00000003814)	Farsa (ENSMUSG00000003808)	Syce2 (ENSMUSG00000003824)	Gcdh (ENSMUSG00000003809)	Klf1 (ENSMUSG00000054191)	Dnase2a (ENSMUSG00000003812)	Mast1 (ENSMUSG00000053693)	Rtbdn (ENSMUSG00000048617) ##22	Rnaseh2a (ENSMUSG00000052926)	Gm49661 (ENSMUSG00000111184)	Prdx2 (ENSMUSG00000005161)	Junb (ENSMUSG00000052837)	Hook2 (ENSMUSG00000052566)	Best2 (ENSMUSG00000052819)	Get3 (ENSMUSG00000052456)	Trir (ENSMUSG00000041203)	Tnpo2 (ENSMUSG00000031691)	Fbxw9 (ENSMUSG00000008167)	Gng14 (ENSMUSG00000095845)	Dhps (ENSMUSG00000060038)	Wdr83 (ENSMUSG00000005150)	Wdr83os (ENSMUSG00000059355)	Man2b1 (ENSMUSG00000005142)
Ryukyu mouse	MODERN SPECIES	17	Nacc1 (MGP_CAROLIEiJ_G0031303)	Trmt1 (MGP_CAROLIEiJ_G0031304)	Nfix (MGP_CAROLIEiJ_G0031305)	Lyl1 (MGP_CAROLIEiJ_G0031306)	MGP_CAROLIEiJ_G0031307	Dand5 (MGP_CAROLIEiJ_G0031308)	Gadd45gip1 (MGP_CAROLIEiJ_G0031309)	Rad23a (MGP_CAROLIEiJ_G0031310)	Calr (MGP_CAROLIEiJ_G0031311)	Farsa (MGP_CAROLIEiJ_G0031312)	Syce2 (MGP_CAROLIEiJ_G0031313)	Gcdh (MGP_CAROLIEiJ_G0031314)	Klf1 (MGP_CAROLIEiJ_G0031315)	Dnase2a (MGP_CAROLIEiJ_G0031316)	Mast1 (MGP_CAROLIEiJ_G0031317)	Rtbdn (MGP_CAROLIEiJ_G0031318) ##22	MGP_CAROLIEiJ_G0031319	Prdx2 (MGP_CAROLIEiJ_G0031320)	Junb (MGP_CAROLIEiJ_G0031321)	Hook2 (MGP_CAROLIEiJ_G0031322)	Best2 (MGP_CAROLIEiJ_G0031323)	Get3 (MGP_CAROLIEiJ_G0031324)	Trir (MGP_CAROLIEiJ_G0031325)	Tnpo2 (MGP_CAROLIEiJ_G0031326)	Fbxw9 (MGP_CAROLIEiJ_G0031327)	Gng14 (MGP_CAROLIEiJ_G0031328)	Dhps (MGP_CAROLIEiJ_G0031329)	Wdr83 (MGP_CAROLIEiJ_G0031330)	Wdr83os (MGP_CAROLIEiJ_G0031331)	Man2b1 (MGP_CAROLIEiJ_G0031332)	Zfp791 (MGP_CAROLIEiJ_G0031333)
Shrew mouse	MODERN SPECIES	12	Cacna1a (MGP_PahariEiJ_G0022907)	Ier2 (MGP_PahariEiJ_G0022908)	Nacc1 (MGP_PahariEiJ_G0022909)	Lyl1 (MGP_PahariEiJ_G0022911)	Nfix (MGP_PahariEiJ_G0022912)	Dand5 (MGP_PahariEiJ_G0022913)	Gadd45gip1 (MGP_PahariEiJ_G0022914)	Rad23a (MGP_PahariEiJ_G0022915)	Calr (MGP_PahariEiJ_G0022916)	Farsa (MGP_PahariEiJ_G0022917)	Syce2 (MGP_PahariEiJ_G0022918)	Gcdh (MGP_PahariEiJ_G0022919)	Klf1 (MGP_PahariEiJ_G0022920)	Dnase2a (MGP_PahariEiJ_G0022921)	Mast1 (MGP_PahariEiJ_G0022922)	MGP_PahariEiJ_G0022923 ##22	Rnaseh2a (MGP_PahariEiJ_G0022924)	MGP_PahariEiJ_G0022925	Junb (MGP_PahariEiJ_G0022926)	Hook2 (MGP_PahariEiJ_G0022927)	Best2 (MGP_PahariEiJ_G0022928)	Get3 (MGP_PahariEiJ_G0022929)	Trir (MGP_PahariEiJ_G0022930)	Tnpo2 (MGP_PahariEiJ_G0022931)	Fbxw9 (MGP_PahariEiJ_G0022932)	Gng14 (MGP_PahariEiJ_G0022933)	Dhps (MGP_PahariEiJ_G0022934)	Wdr83 (MGP_PahariEiJ_G0022935)	Man2b1 (MGP_PahariEiJ_G0022936)	Zfp791 (MGP_PahariEiJ_G0022937)	Or7c19 (MGP_PahariEiJ_G0022938)
Rat	MODERN SPECIES	10	Cacna1a (ENSRNOG00000052707)	Ier2 (ENSRNOG00000067274)	Nacc1 (ENSRNOG00000002864)	Trmt1 (ENSRNOG00000002914)	Lyl1 (ENSRNOG00000002950)	Nfix (ENSRNOG00000002983)	Dand5 (ENSRNOG00000033368)	Gadd45gip1 (ENSRNOG00000003011)	Rad23a (ENSRNOG00000003026)	Calr (ENSRNOG00000003029)	Farsa (ENSRNOG00000003149)	Gcdh (ENSRNOG00000003307)	Klf1 (ENSRNOG00000003443)	Dnase2 (ENSRNOG00000023830)	MAST1 (ENSRNOG00000003469)	Rtbdn (ENSRNOG00000043215) ##22	Rnaseh2a (ENSRNOG00000068063)	Thsd8 (ENSRNOG00000003504)	Prdx2 (ENSRNOG00000003520)	Hook2 (ENSRNOG00000003682)	Best2 (ENSRNOG00000003737)	Get3 (ENSRNOG00000003747)	Trir (ENSRNOG00000003863)	Tnpo2 (ENSRNOG00000003970)	Fbxw9 (ENSRNOG00000004212)	Gng14 (ENSRNOG00000023899)	Dhps (ENSRNOG00000004219)	Wdr83 (ENSRNOG00000004287)	Man2b1 (ENSRNOG00000023910)	Zfp791 (ENSRNOG00000023920)	LOC108348296 (ENSRNOG00000046751)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1738	Cacna1a (ENSNGAG00000000916)	Nacc1 (ENSNGAG00000021982)	Trmt1 (ENSNGAG00000022486)	Lyl1 (ENSNGAG00000014673)	Nfix (ENSNGAG00000016724)	Dand5 (ENSNGAG00000021187)	Gadd45gip1 (ENSNGAG00000022030)	Rad23a (ENSNGAG00000022186)	Calr (ENSNGAG00000011286)	Farsa (ENSNGAG00000018353)	Syce2 (ENSNGAG00000023150)	Gcdh (ENSNGAG00000022070)	Klf1 (ENSNGAG00000022931)	Dnase2a (ENSNGAG00000022792)	Mast1 (ENSNGAG00000002377)	Rtbdn (ENSNGAG00000011358) ##22	Rnaseh2a (ENSNGAG00000017988)	Prdx2 (ENSNGAG00000022496)	Junb (ENSNGAG00000006939)	Hook2 (ENSNGAG00000022705)	Best2 (ENSNGAG00000014058)	Get3 (ENSNGAG00000015555)	Trir (ENSNGAG00000017973)	Tnpo2 (ENSNGAG00000000650)	ENSNGAG00000017579	Gng14 (ENSNGAG00000018951)	ENSNGAG00000008057	Wdr83 (ENSNGAG00000001041)	Wdr83os (ENSNGAG00000022509)	ENSNGAG00000022764	ENSNGAG00000005762
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Sciuridae	ANCESTRAL SPECIES	20	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Marmotini	ANCESTRAL SPECIES	41	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Marmotini_b	ANCESTRAL SPECIES	40	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Arctic ground squirrel	MODERN SPECIES	217	NACC1 (ENSUPAG00010008354)	TRMT1 (ENSUPAG00010008343)	LYL1 (ENSUPAG00010008333)	ENSUPAG00010008329	NFIX (ENSUPAG00010008230)	DAND5 (ENSUPAG00010008227)	GADD45GIP1 (ENSUPAG00010008222)	RAD23A (ENSUPAG00010008197)	CALR (ENSUPAG00010008184)	FARSA (ENSUPAG00010008158)	SYCE2 (ENSUPAG00010008135)	GCDH (ENSUPAG00010008102)	KLF1 (ENSUPAG00010008092)	DNASE2 (ENSUPAG00010008053)	MAST1 (ENSUPAG00010007994)	RTBDN (ENSUPAG00010007981) ##22	RNASEH2A (ENSUPAG00010007909)	THSD8 (ENSUPAG00010007901)	ENSUPAG00010007882	JUNB (ENSUPAG00010007878)	HOOK2 (ENSUPAG00010007823)	BEST2 (ENSUPAG00010007798)	GET3 (ENSUPAG00010007783)	TRIR (ENSUPAG00010007779)	TNPO2 (ENSUPAG00010007721)	FBXW9 (ENSUPAG00010007705)	ENSUPAG00010007702	DHPS (ENSUPAG00010007686)	WDR83 (ENSUPAG00010007673)	WDR83OS (ENSUPAG00010007669)	MAN2B1 (ENSUPAG00010007651)
Squirrel	MODERN SPECIES	259	STX10 (ENSSTOG00000007880)	NACC1 (ENSSTOG00000007865)	TRMT1 (ENSSTOG00000012531)	LYL1 (ENSSTOG00000028401)	NFIX (ENSSTOG00000007848)	DAND5 (ENSSTOG00000016420)	GADD45GIP1 (ENSSTOG00000016419)	RAD23A (ENSSTOG00000024117)	CALR (ENSSTOG00000008774)	FARSA (ENSSTOG00000008748)	SYCE2 (ENSSTOG00000008737)	GCDH (ENSSTOG00000008724)	KLF1 (ENSSTOG00000021956)	DNASE2 (ENSSTOG00000008712)	MAST1 (ENSSTOG00000008668)	Rtbdn (ENSSTOG00000006228) ##22	RNASEH2A (ENSSTOG00000006224)	ENSSTOG00000025862	JUNB (ENSSTOG00000031929)	HOOK2 (ENSSTOG00000011709)	BEST2 (ENSSTOG00000019471)	GET3 (ENSSTOG00000006992)	TRIR (ENSSTOG00000006978)	TNPO2 (ENSSTOG00000006952)	FBXW9 (ENSSTOG00000006921)	ENSSTOG00000030269	DHPS (ENSSTOG00000006900)	WDR83 (ENSSTOG00000006883)	WDR83OS (ENSSTOG00000006874)	MAN2B1 (ENSSTOG00000029598)	ENSSTOG00000034910
Alpin marmot	MODERN SPECIES	24	STX10 (ENSMMMG00000021518)	NACC1 (ENSMMMG00000021510)	TRMT1 (ENSMMMG00000021080)	LYL1 (ENSMMMG00000021069)	NFIX (ENSMMMG00000021044)	DAND5 (ENSMMMG00000021038)	GADD45GIP1 (ENSMMMG00000021032)	ENSMMMG00000021016	CALR (ENSMMMG00000021010)	FARSA (ENSMMMG00000020996)	SYCE2 (ENSMMMG00000020981)	GCDH (ENSMMMG00000020963)	KLF1 (ENSMMMG00000020960)	DNASE2 (ENSMMMG00000020947)	MAST1 (ENSMMMG00000020911)	RTBDN (ENSMMMG00000020903) ##22	RNASEH2A (ENSMMMG00000020879)	THSD8 (ENSMMMG00000020877)	ENSMMMG00000020873	JUNB (ENSMMMG00000020869)	HOOK2 (ENSMMMG00000020811)	BEST2 (ENSMMMG00000020790)	GET3 (ENSMMMG00000020781)	TRIR (ENSMMMG00000020777)	TNPO2 (ENSMMMG00000020726)	FBXW9 (ENSMMMG00000020717)	ENSMMMG00000020713	DHPS (ENSMMMG00000020706)	WDR83 (ENSMMMG00000020697)	WDR83OS (ENSMMMG00000020687)	MAN2B1 (ENSMMMG00000020653)
Eurasian red squirrel	MODERN SPECIES	7	STX10 (ENSSVLG00005018658)	NACC1 (ENSSVLG00005018614)	TRMT1 (ENSSVLG00005018534)	LYL1 (ENSSVLG00005018485)	NFIX (ENSSVLG00005018211)	DAND5 (ENSSVLG00005018136)	GADD45GIP1 (ENSSVLG00005018098)	RAD23A (ENSSVLG00005018009)	CALR (ENSSVLG00005017951)	FARSA (ENSSVLG00005017880)	ENSSVLG00005017827	GCDH (ENSSVLG00005017674)	KLF1 (ENSSVLG00005017619)	DNASE2 (ENSSVLG00005017585)	MAST1 (ENSSVLG00005017111)	RTBDN (ENSSVLG00005016997) ##22	RNASEH2A (ENSSVLG00005016950)	THSD8 (ENSSVLG00005016905)	PRDX2 (ENSSVLG00005016837)	JUNB (ENSSVLG00005025317)	HOOK2 (ENSSVLG00005025297)	BEST2 (ENSSVLG00005025274)	ENSSVLG00005025252	TRIR (ENSSVLG00005025236)	TNPO2 (ENSSVLG00005025206)	FBXW9 (ENSSVLG00005025161)	ENSSVLG00005025134	DHPS (ENSSVLG00005025110)	ENSSVLG00005025092	ENSSVLG00005025070	ENSSVLG00005025050
Hystricomorpha	ANCESTRAL SPECIES	55	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a.k.b	ENSGT00950000182915.b.b.a.a.l	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	15	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a.k.b	ENSGT00950000182915.b.b.a.a.l	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Hystricomorpha_b	ANCESTRAL SPECIES	31	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a.k.b	ENSGT00950000182915.b.b.a.a.l	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00390000003094
Long-tailed chinchilla	MODERN SPECIES	122	IER2 (ENSCLAG00000015309)	NACC1 (ENSCLAG00000016122)	TRMT1 (ENSCLAG00000015295)	LYL1 (ENSCLAG00000014483)	NFIX (ENSCLAG00000013479)	DAND5 (ENSCLAG00000011402)	GADD45GIP1 (ENSCLAG00000015799)	RAD23A (ENSCLAG00000016638)	CALR (ENSCLAG00000012923)	FARSA (ENSCLAG00000015489)	SYCE2 (ENSCLAG00000014420)	GCDH (ENSCLAG00000015590)	KLF1 (ENSCLAG00000013218)	DNASE2 (ENSCLAG00000012983)	MAST1 (ENSCLAG00000012224)	RTBDN (ENSCLAG00000014391) ##22	RNASEH2A (ENSCLAG00000014930)	PRDX2 (ENSCLAG00000013924)	JUNB (ENSCLAG00000018028)	HOOK2 (ENSCLAG00000012972)	BEST2 (ENSCLAG00000012820)	GET3 (ENSCLAG00000011393)	TRIR (ENSCLAG00000011164)	TNPO2 (ENSCLAG00000013442)	ENSCLAG00000011841	FBXW9 (ENSCLAG00000012587)	DHPS (ENSCLAG00000012256)	WDR83 (ENSCLAG00000012198)	ENSCLAG00000011821	MAN2B1 (ENSCLAG00000013086)	ZNF333 (ENSCLAG00000014959)
Degu	MODERN SPECIES	114	ENSODEG00000019786	TRMT1 (ENSODEG00000010323)	LYL1 (ENSODEG00000010992)	NFIX (ENSODEG00000010171)	ENSODEG00000010129	GADD45GIP1 (ENSODEG00000010728)	RAD23A (ENSODEG00000011287)	CALR (ENSODEG00000010711)	FARSA (ENSODEG00000010433)	ENSODEG00000010928	GCDH (ENSODEG00000010247)	KLF1 (ENSODEG00000009692)	DNASE2 (ENSODEG00000009845)	ENSODEG00000011144	ENSODEG00000012916	RTBDN (ENSODEG00000011942) ##22	RNASEH2A (ENSODEG00000009772)	PRDX2 (ENSODEG00000009999)	JUNB (ENSODEG00000019944)	HOOK2 (ENSODEG00000011305)	BEST2 (ENSODEG00000010248)	GET3 (ENSODEG00000010662)	TRIR (ENSODEG00000010879)	TNPO2 (ENSODEG00000009670)	FBXW9 (ENSODEG00000010372)	ENSODEG00000013891	ENSODEG00000011490	DHPS (ENSODEG00000010756)	WDR83 (ENSODEG00000010258)	WDR83OS (ENSODEG00000011674)	MAN2B1 (ENSODEG00000010434)
Guinea pig	MODERN SPECIES	42	YJU2B (ENSCPOG00000006545)	CACNA1A (ENSCPOG00000025184)	NACC1 (ENSCPOG00000022222)	TRMT1 (ENSCPOG00000011754)	LYL1 (ENSCPOG00000036111)	NFIX (ENSCPOG00000022563)	RAD23A (ENSCPOG00000037407)	GADD45GIP1 (ENSCPOG00000024072)	CALR (ENSCPOG00000000791)	FARSA (ENSCPOG00000000787)	ENSCPOG00000033097	GCDH (ENSCPOG00000027058)	KLF1 (ENSCPOG00000000784)	DNASE2 (ENSCPOG00000000783)	MAST1 (ENSCPOG00000000777)	RTBDN (ENSCPOG00000000774) ##22	RNASEH2A (ENSCPOG00000038877)	PRDX2 (ENSCPOG00000023583)	JUNB (ENSCPOG00000020703)	HOOK2 (ENSCPOG00000000771)	BEST2 (ENSCPOG00000000768)	GET3 (ENSCPOG00000026971)	TRIR (ENSCPOG00000003765)	TNPO2 (ENSCPOG00000007033)	FBXW9 (ENSCPOG00000007026)	ENSCPOG00000033374	DHPS (ENSCPOG00000002309)	WDR83 (ENSCPOG00000002306)	WDR83OS (ENSCPOG00000022365)	MAN2B1 (ENSCPOG00000002295)	ENSCPOG00000023273
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Artiodactyla	ANCESTRAL SPECIES	22	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00860000135639	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Suina	ANCESTRAL SPECIES	16	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Chacoan peccary	MODERN SPECIES	769	IER2 (ENSCWAG00000001159)	STX10 (ENSCWAG00000001131)	NACC1 (ENSCWAG00000001107)	TRMT1 (ENSCWAG00000001026)	LYL1 (ENSCWAG00000001006)	NFIX (ENSCWAG00000000950)	GADD45GIP1 (ENSCWAG00000000909)	RAD23A (ENSCWAG00000000887)	CALR (ENSCWAG00000000858)	FARSA (ENSCWAG00000000829)	SYCE2 (ENSCWAG00000000797)	GCDH (ENSCWAG00000000760)	KLF1 (ENSCWAG00000000736)	DNASE2 (ENSCWAG00000000717)	MAST1 (ENSCWAG00000000559)	RTBDN (ENSCWAG00000000515) ##22	RNASEH2A (ENSCWAG00000000486)	THSD8 (ENSCWAG00000000470)	ENSCWAG00000000453	JUNB (ENSCWAG00000000438)
Pig	MODERN SPECIES	10	STX10 (ENSSSCG00000013752)	NACC1 (ENSSSCG00000013751)	TRMT1 (ENSSSCG00000013744)	LYL1 (ENSSSCG00000024549)	NFIX (ENSSSCG00000013742)	ENSSSCG00000048273	RAD23A (ENSSSCG00000013747)	GADD45GIP1 (ENSSSCG00000034859)	CALR (ENSSSCG00000013746)	FARSA (ENSSSCG00000013745)	SYCE2 (ENSSSCG00000013740)	GCDH (ENSSSCG00000013729)	KLF1 (ENSSSCG00000013730)	DNASE2 (ENSSSCG00000013731)	MAST1 (ENSSSCG00000013732)	RTBDN (ENSSSCG00000033304) ##22	RNASEH2A (ENSSSCG00000013737)	PRDX2 (ENSSSCG00000013736)	JUNB (ENSSSCG00000013735)	HOOK2 (ENSSSCG00000013734)	BEST2 (ENSSSCG00000013733)	GET3 (ENSSSCG00000038776)	TRIR (ENSSSCG00000013727)	TNPO2 (ENSSSCG00000013726)	FBXW9 (ENSSSCG00000013725)	ENSSSCG00000052605	DHPS (ENSSSCG00000013723)	WDR83 (ENSSSCG00000013722)	WDR83OS (ENSSSCG00000013721)	MAN2B1 (ENSSSCG00000013720)	ENSSSCG00000029347
Artiodactyla_a	ANCESTRAL SPECIES	23	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00860000135639	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Camelidae	ANCESTRAL SPECIES	69	ENSGT00940000156518.C	ENSGT00900000141021.b.b	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Arabian camel	MODERN SPECIES	14	IER2 (ENSCDRG00005022160)	STX10 (ENSCDRG00005022163)	NACC1 (ENSCDRG00005022164)	TRMT1 (ENSCDRG00005022165)	LYL1 (ENSCDRG00005022168)	NFIX (ENSCDRG00005022174)	ENSCDRG00005022176	GADD45GIP1 (ENSCDRG00005022178)	RAD23A (ENSCDRG00005022180)	CALR (ENSCDRG00005022183)	FARSA (ENSCDRG00005022184)	GCDH (ENSCDRG00005022187)	KLF1 (ENSCDRG00005022188)	DNASE2 (ENSCDRG00005022189)	MAST1 (ENSCDRG00005022190)	RTBDN (ENSCDRG00005022192) ##22	RNASEH2A (ENSCDRG00005022193)	THSD8 (ENSCDRG00005022194)	PRDX2 (ENSCDRG00005022195)	JUNB (ENSCDRG00005022198)	HOOK2 (ENSCDRG00005022199)	BEST2 (ENSCDRG00005022200)	ASNA1 (ENSCDRG00005022202)	TRIR (ENSCDRG00005022203)	TNPO2 (ENSCDRG00005022205)	FBXW9 (ENSCDRG00005022210)	ENSCDRG00005022213	DHPS (ENSCDRG00005022217)	WDR83 (ENSCDRG00005022223)	WDR83OS (ENSCDRG00005022225)	MAN2B1 (ENSCDRG00005022226)
Alpaca	MODERN SPECIES	388																RTBDN (ENSVPAG00000001006) ##22
Artiodactyla_b	ANCESTRAL SPECIES	23	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00860000135639	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00860000135639	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a.m	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00860000135639	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a.m	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Sperm whale	MODERN SPECIES	26							GADD45GIP1 (ENSPCTG00005019623)	RAD23A (ENSPCTG00005019572)	CALR (ENSPCTG00005019546)	FARSA (ENSPCTG00005019481)	SYCE2 (ENSPCTG00005019462)	GCDH (ENSPCTG00005019424)	KLF1 (ENSPCTG00005019380)	DNASE2 (ENSPCTG00005019363)	MAST1 (ENSPCTG00005019033)	RTBDN (ENSPCTG00005018893) ##22	RNASEH2A (ENSPCTG00005018850)	THSD8 (ENSPCTG00005018824)	PRDX2 (ENSPCTG00005018785)	JUNB (ENSPCTG00005018767)	HOOK2 (ENSPCTG00005018712)	BEST2 (ENSPCTG00005018605)	ASNA1 (ENSPCTG00005018458)	TRIR (ENSPCTG00005018441)	TNPO2 (ENSPCTG00005018339)	FBXW9 (ENSPCTG00005018271)	ENSPCTG00005018240	DHPS (ENSPCTG00005018077)	WDR83 (ENSPCTG00005018037)	WDR83OS (ENSPCTG00005017991)
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00860000135639	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a.m	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Dolphin	MODERN SPECIES	135							GADD45GIP1 (ENSTTRG00000003602)	RAD23A (ENSTTRG00000003601)	CALR (ENSTTRG00000003600)	FARSA (ENSTTRG00000003599)	SYCE2 (ENSTTRG00000003598)	GCDH (ENSTTRG00000003597)	KLF1 (ENSTTRG00000003596)	DNASE2 (ENSTTRG00000003595)	MAST1 (ENSTTRG00000003594)	RTBDN (ENSTTRG00000003593) ##22	RNASEH2A (ENSTTRG00000003592)	PRDX2 (ENSTTRG00000003591)	JUNB (ENSTTRG00000003590)	HOOK2 (ENSTTRG00000003588)	BEST2 (ENSTTRG00000003586)
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a.m	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Vaquita	MODERN SPECIES	14	IER2 (ENSPSNG00000005553)	STX10 (ENSPSNG00000005596)	NACC1 (ENSPSNG00000005645)	TRMT1 (ENSPSNG00000005699)	LYL1 (ENSPSNG00000005801)	NFIX (ENSPSNG00000005985)	ENSPSNG00000006174	GADD45GIP1 (ENSPSNG00000006226)	RAD23A (ENSPSNG00000006274)	CALR (ENSPSNG00000006361)	FARSA (ENSPSNG00000006551)	GCDH (ENSPSNG00000006697)	KLF1 (ENSPSNG00000006733)	DNASE2 (ENSPSNG00000006758)	MAST1 (ENSPSNG00000006815)	RTBDN (ENSPSNG00000007000) ##22	RNASEH2A (ENSPSNG00000007087)	PRDX2 (ENSPSNG00000007156)	JUNB (ENSPSNG00000007194)	HOOK2 (ENSPSNG00000007235)	BEST2 (ENSPSNG00000007304)	TRIR (ENSPSNG00000007370)	TNPO2 (ENSPSNG00000007421)	FBXW9 (ENSPSNG00000000092)	ENSPSNG00000000122	DHPS (ENSPSNG00000000212)	WDR83OS (ENSPSNG00000000152)	WDR83 (ENSPSNG00000000274)	MAN2B1 (ENSPSNG00000000314)	ENSPSNG00000000399	ENSPSNG00000000426
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a.m	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000266406	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Narwhal	MODERN SPECIES	298	STX10 (ENSMMNG00015005279)	NACC1 (ENSMMNG00015005326)	TRMT1 (ENSMMNG00015005352)	LYL1 (ENSMMNG00015005401)	NFIX (ENSMMNG00015005457)	ENSMMNG00015005553	GADD45GIP1 (ENSMMNG00015005584)	RAD23A (ENSMMNG00015004840)	ENSMMNG00015004845	FARSA (ENSMMNG00015004851)	SYCE2 (ENSMMNG00015004858)	GCDH (ENSMMNG00015004861)	KLF1 (ENSMMNG00015004865)	DNASE2 (ENSMMNG00015004869)	MAST1 (ENSMMNG00015004880)	RTBDN (ENSMMNG00015004901) ##22	RNASEH2A (ENSMMNG00015004907)	THSD8 (ENSMMNG00015004915)	PRDX2 (ENSMMNG00015004919)	JUNB (ENSMMNG00015004931)	HOOK2 (ENSMMNG00015004937)	BEST2 (ENSMMNG00015004949)	GET3 (ENSMMNG00015004960)	TRIR (ENSMMNG00015004970)	TNPO2 (ENSMMNG00015004980)	FBXW9 (ENSMMNG00015005000)	ENSMMNG00015005005	DHPS (ENSMMNG00015005018)	WDR83 (ENSMMNG00015005037)	WDR83OS (ENSMMNG00015005049)	MAN2B1 (ENSMMNG00015005071)
Beluga whale	MODERN SPECIES	27	IER2 (ENSDLEG00000011026)	STX10 (ENSDLEG00000010977)	NACC1 (ENSDLEG00000010956)	TRMT1 (ENSDLEG00000010945)	LYL1 (ENSDLEG00000010935)	NFIX (ENSDLEG00000010831)	GADD45GIP1 (ENSDLEG00000010807)	RAD23A (ENSDLEG00000010781)	CALR (ENSDLEG00000010762)	FARSA (ENSDLEG00000010737)	SYCE2 (ENSDLEG00000010725)	KLF1 (ENSDLEG00000010698)	GCDH (ENSDLEG00000010654)	DNASE2 (ENSDLEG00000010624)	MAST1 (ENSDLEG00000010566)	RTBDN (ENSDLEG00000010548) ##22	RNASEH2A (ENSDLEG00000010529)	PRDX2 (ENSDLEG00000010520)	JUNB (ENSDLEG00000010512)	HOOK2 (ENSDLEG00000010436)	BEST2 (ENSDLEG00000010397)	ASNA1 (ENSDLEG00000010378)	TRIR (ENSDLEG00000010365)	TNPO2 (ENSDLEG00000010236)	FBXW9 (ENSDLEG00000010197)	DHPS (ENSDLEG00000010176)	WDR83 (ENSDLEG00000010152)	WDR83OS (ENSDLEG00000010133)	MAN2B1 (ENSDLEG00000010021)	ENSDLEG00000010003	ENSDLEG00000009987
Blue whale	MODERN SPECIES	14	IER2 (ENSBMSG00010006332)	STX10 (ENSBMSG00010006307)	NACC1 (ENSBMSG00010006289)	TRMT1 (ENSBMSG00010006254)	LYL1 (ENSBMSG00010006239)	NFIX (ENSBMSG00010006215)	GADD45GIP1 (ENSBMSG00010006182)	RAD23A (ENSBMSG00010006168)	ENSBMSG00010006144	FARSA (ENSBMSG00010006124)	ENSBMSG00010006111	GCDH (ENSBMSG00010006092)	KLF1 (ENSBMSG00010006067)	DNASE2 (ENSBMSG00010006057)	MAST1 (ENSBMSG00010006004)	RTBDN (ENSBMSG00010005967) ##22	RNASEH2A (ENSBMSG00010005947)	THSD8 (ENSBMSG00010005934)	PRDX2 (ENSBMSG00010005921)	JUNB (ENSBMSG00010005909)	HOOK2 (ENSBMSG00010005872)	BEST2 (ENSBMSG00010005835)	GET3 (ENSBMSG00010005817)	TRIR (ENSBMSG00010005806)	TNPO2 (ENSBMSG00010005781)	FBXW9 (ENSBMSG00010005739)	ENSBMSG00010005715	DHPS (ENSBMSG00010005704)	WDR83 (ENSBMSG00010005695)	WDR83OS (ENSBMSG00010005684)	MAN2B1 (ENSBMSG00010005667)
Pecora	ANCESTRAL SPECIES		ENSGT00900000141021.b.b	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Percora_a	ANCESTRAL SPECIES		ENSGT00900000141021.b.b	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Bovidae	ANCESTRAL SPECIES		ENSGT00900000141021.b.b	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Bovinae	ANCESTRAL SPECIES	2	ENSGT00900000141021.b.b	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
American bison	MODERN SPECIES	3279	IER2 (ENSBBBG00000005013)	STX10 (ENSBBBG00000005006)	NACC1 (ENSBBBG00000019295)	TRMT1 (ENSBBBG00000019284)	LYL1 (ENSBBBG00000019215)	NFIX (ENSBBBG00000019204)	ENSBBBG00000008167	RAD23A (ENSBBBG00000019119)	CALR (ENSBBBG00000004880)	FARSA (ENSBBBG00000019049)	SYCE2 (ENSBBBG00000004849)	GCDH (ENSBBBG00000004838)	KLF1 (ENSBBBG00000004825)	DNASE2 (ENSBBBG00000018969)	MAST1 (ENSBBBG00000018956)	RTBDN (ENSBBBG00000018793) ##22	RNASEH2A (ENSBBBG00000018775)	THSD8 (ENSBBBG00000018770)	PRDX2 (ENSBBBG00000008767)	HOOK2 (ENSBBBG00000009147)	BEST2 (ENSBBBG00000018649)	GET3 (ENSBBBG00000004626)	ENSBBBG00000018618	TNPO2 (ENSBBBG00000018607)	FBXW9 (ENSBBBG00000018508)	ENSBBBG00000018499	DHPS (ENSBBBG00000004547)	WDR83 (ENSBBBG00000018478)	WDR83OS (ENSBBBG00000004534)	MAN2B1 (ENSBBBG00000018459)	ENSBBBG00000018419
Bos	ANCESTRAL SPECIES	3	ENSGT00900000141021.b.b	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b.r	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Bos_b	ANCESTRAL SPECIES	2	ENSGT00900000141021.b.b	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b.r	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00950000182755.b.a.a.a.a.a.a.b.j
Hybrid Bos Indicus	MODERN SPECIES	26	CACNA1A (ENSBIXG00005021956)	IER2 (ENSBIXG00005003732)	STX10 (ENSBIXG00005006889)	TRMT1 (ENSBIXG00005022272)	LYL1 (ENSBIXG00005003796)	NACC1 (ENSBIXG00005003906)	GADD45GIP1 (ENSBIXG00005022995)	RAD23A (ENSBIXG00005023035)	CALR (ENSBIXG00005023092)	FARSA (ENSBIXG00005023164)	ENSBIXG00005023188	GCDH (ENSBIXG00005006673)	KLF1 (ENSBIXG00005006052)	DNASE2 (ENSBIXG00005023267)	MAST1 (ENSBIXG00005023334)	RTBDN (ENSBIXG00005007174) ##22	RNASEH2A (ENSBIXG00005023406)	JUNB (ENSBIXG00005023431)	PRDX2 (ENSBIXG00005004022)	HOOK2 (ENSBIXG00005023624)	BEST2 (ENSBIXG00005004058)	GET3 (ENSBIXG00005023763)	TNPO2 (ENSBIXG00005024052)	ENSBIXG00005024114	FBXW9 (ENSBIXG00005024191)	DHPS (ENSBIXG00005024243)	WDR83 (ENSBIXG00005004147)	WDR83OS (ENSBIXG00005024294)	MAN2B1 (ENSBIXG00005024343)	ENSBIXG00005024372	ENSBIXG00005004163
Cow	MODERN SPECIES	26	IER2 (ENSBTAG00000016354)	STX10 (ENSBTAG00000016352)	NACC1 (ENSBTAG00000016350)	TRMT1 (ENSBTAG00000019325)	LYL1 (ENSBTAG00000019329)	NFIX (ENSBTAG00000018229)	GADD45GIP1 (ENSBTAG00000015117)	RAD23A (ENSBTAG00000015116)	CALR (ENSBTAG00000015114)	FARSA (ENSBTAG00000021374)	SYCE2 (ENSBTAG00000016213)	GCDH (ENSBTAG00000016211)	KLF1 (ENSBTAG00000006083)	DNASE2 (ENSBTAG00000006082)	MAST1 (ENSBTAG00000006080)	RTBDN (ENSBTAG00000006077) ##22	RNASEH2A (ENSBTAG00000009661)	PRDX2 (ENSBTAG00000012062)	JUNB (ENSBTAG00000012046)	HOOK2 (ENSBTAG00000008654)	BEST2 (ENSBTAG00000025652)	GET3 (ENSBTAG00000011837)	TRIR (ENSBTAG00000011825)	TNPO2 (ENSBTAG00000011811)	FBXW9 (ENSBTAG00000020924)	GNG14 (ENSBTAG00000006251)	DHPS (ENSBTAG00000006247)	WDR83 (ENSBTAG00000006245)	WDR83OS (ENSBTAG00000006244)	MAN2B1 (ENSBTAG00000006241)	ENSBTAG00000016721
Bos_a	ANCESTRAL SPECIES	57	ENSGT00900000141021.b.b	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b.r	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Domestic yak	MODERN SPECIES	27	STX10 (ENSBGRG00000008914)	NACC1 (ENSBGRG00000008843)	ENSBGRG00000008808	TRMT1 (ENSBGRG00000008629)	LYL1 (ENSBGRG00000008585)	NFIX (ENSBGRG00000007656)	GADD45GIP1 (ENSBGRG00000007568)	RAD23A (ENSBGRG00000007230)	CALR (ENSBGRG00000007159)	FARSA (ENSBGRG00000006949)	SYCE2 (ENSBGRG00000006880)	GCDH (ENSBGRG00000006775)	KLF1 (ENSBGRG00000006745)	DNASE2 (ENSBGRG00000006722)	MAST1 (ENSBGRG00000006558)	RTBDN (ENSBGRG00000006406) ##22	RNASEH2A (ENSBGRG00000006330)	THSD8 (ENSBGRG00000006299)	PRDX2 (ENSBGRG00000006234)	JUNB (ENSBGRG00000006220)	HOOK2 (ENSBGRG00000005838)	BEST2 (ENSBGRG00000005756)	GET3 (ENSBGRG00000005656)	TRIR (ENSBGRG00000005621)	TNPO2 (ENSBGRG00000005497)	FBXW9 (ENSBGRG00000005389)	ENSBGRG00000005368	DHPS (ENSBGRG00000005293)	WDR83 (ENSBGRG00000005260)	WDR83OS (ENSBGRG00000005213)	MAN2B1 (ENSBGRG00000005041)
Wild yak	MODERN SPECIES	1191	IER2 (ENSBMUG00000015268)	STX10 (ENSBMUG00000015238)	NACC1 (ENSBMUG00000015196)	TRMT1 (ENSBMUG00000015157)	LYL1 (ENSBMUG00000015125)	NFIX (ENSBMUG00000015081)	GADD45GIP1 (ENSBMUG00000015011)	RAD23A (ENSBMUG00000014991)	CALR (ENSBMUG00000014947)	FARSA (ENSBMUG00000014925)	SYCE2 (ENSBMUG00000014874)	GCDH (ENSBMUG00000014853)	KLF1 (ENSBMUG00000014835)	DNASE2 (ENSBMUG00000014821)	MAST1 (ENSBMUG00000014789)	RTBDN (ENSBMUG00000014745) ##22	RNASEH2A (ENSBMUG00000014723)	THSD8 (ENSBMUG00000014710)	PRDX2 (ENSBMUG00000014704)	HOOK2 (ENSBMUG00000014550)	BEST2 (ENSBMUG00000014141)	ASNA1 (ENSBMUG00000014104)	TRIR (ENSBMUG00000014082)	TNPO2 (ENSBMUG00000013142)	FBXW9 (ENSBMUG00000012328)	ENSBMUG00000012320	DHPS (ENSBMUG00000012304)	WDR83 (ENSBMUG00000012287)	WDR83OS (ENSBMUG00000012262)	MAN2B1 (ENSBMUG00000012248)	ENSBMUG00000012228
Caprinae	ANCESTRAL SPECIES	3	ENSGT00900000141021.b.b	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Goat	MODERN SPECIES	26	IER2 (ENSCHIG00000007994)	STX10 (ENSCHIG00000018262)	NACC1 (ENSCHIG00000023771)	TRMT1 (ENSCHIG00000013569)	LYL1 (ENSCHIG00000027128)	NFIX (ENSCHIG00000022384)	GADD45GIP1 (ENSCHIG00000017823)	RAD23A (ENSCHIG00000017626)	CALR (ENSCHIG00000023446)	FARSA (ENSCHIG00000022617)	SYCE2 (ENSCHIG00000023183)	GCDH (ENSCHIG00000008032)	KLF1 (ENSCHIG00000024201)	DNASE2 (ENSCHIG00000018237)	MAST1 (ENSCHIG00000012078)	RTBDN (ENSCHIG00000018795) ##22	RNASEH2A (ENSCHIG00000014460)	ENSCHIG00000008839	JUNB (ENSCHIG00000007846)	HOOK2 (ENSCHIG00000017730)	BEST2 (ENSCHIG00000009210)	GET3 (ENSCHIG00000023078)	TRIR (ENSCHIG00000017848)	TNPO2 (ENSCHIG00000011718)	FBXW9 (ENSCHIG00000027225)	ENSCHIG00000018933	DHPS (ENSCHIG00000011017)	WDR83 (ENSCHIG00000025793)	WDR83OS (ENSCHIG00000020903)	MAN2B1 (ENSCHIG00000001921)	ENSCHIG00000016295
Rambouillet Sheep	MODERN SPECIES	21	ENSOARG00020008152	IER2 (ENSOARG00020008180)	STX10 (ENSOARG00020008210)	NACC1 (ENSOARG00020008294)	TRMT1 (ENSOARG00020008381)	LYL1 (ENSOARG00020008580)	NFIX (ENSOARG00020008684)	GADD45GIP1 (ENSOARG00020009801)	RAD23A (ENSOARG00020009840)	CALR (ENSOARG00020009931)	FARSA (ENSOARG00020010040)	GCDH (ENSOARG00020010253)	KLF1 (ENSOARG00020010329)	DNASE2 (ENSOARG00020010363)	MAST1 (ENSOARG00020010455)	RTBDN (ENSOARG00020011079) ##22	RNASEH2A (ENSOARG00020011239)	THSD8 (ENSOARG00020011281)	PRDX2 (ENSOARG00020011331)	JUNB (ENSOARG00020011427)	BEST2 (ENSOARG00020011833)	ASNA1 (ENSOARG00020011930)	TRIR (ENSOARG00020012000)	TNPO2 (ENSOARG00020012156)	FBXW9 (ENSOARG00020012297)	ENSOARG00020012653	DHPS (ENSOARG00020012703)	WDR83 (ENSOARG00020012835)	WDR83OS (ENSOARG00020012900)	MAN2B1 (ENSOARG00020012993)	ENSOARG00020013719
Siberian musk deer	MODERN SPECIES	34	IER2 (ENSMMSG00000018376)	STX10 (ENSMMSG00000018243)	NACC1 (ENSMMSG00000018197)	TRMT1 (ENSMMSG00000018011)	LYL1 (ENSMMSG00000017977)	NFIX (ENSMMSG00000017773)	GADD45GIP1 (ENSMMSG00000017735)	RAD23A (ENSMMSG00000017530)	ENSMMSG00000017464	FARSA (ENSMMSG00000017435)	SYCE2 (ENSMMSG00000017412)	GCDH (ENSMMSG00000017382)	KLF1 (ENSMMSG00000017358)	DNASE2 (ENSMMSG00000017335)	MAST1 (ENSMMSG00000017118)	RTBDN (ENSMMSG00000017054) ##22	RNASEH2A (ENSMMSG00000017025)	THSD8 (ENSMMSG00000017010)	ENSMMSG00000016984	JUNB (ENSMMSG00000016968)	HOOK2 (ENSMMSG00000016914)	BEST2 (ENSMMSG00000016855)	GET3 (ENSMMSG00000016786)	TRIR (ENSMMSG00000016742)	TNPO2 (ENSMMSG00000016676)	FBXW9 (ENSMMSG00000016611)	ENSMMSG00000016585	DHPS (ENSMMSG00000016482)	WDR83 (ENSMMSG00000016414)	ENSMMSG00000016351	MAN2B1 (ENSMMSG00000016295)
Yarkand deer	MODERN SPECIES	32	CACNA1A (ENSCHYG00000009142)	IER2 (ENSCHYG00000015316)	STX10 (ENSCHYG00000015356)	NACC1 (ENSCHYG00000015883)	TRMT1 (ENSCHYG00000016033)	LYL1 (ENSCHYG00000016421)	NFIX (ENSCHYG00000016512)	GADD45GIP1 (ENSCHYG00000017788)	ENSCHYG00000017855	FARSA (ENSCHYG00000018361)	GCDH (ENSCHYG00000018661)	KLF1 (ENSCHYG00000019002)	DNASE2 (ENSCHYG00000019086)	MAST1 (ENSCHYG00000019171)	ENSCHYG00000019426	RTBDN (ENSCHYG00000019447) ##22	RNASEH2A (ENSCHYG00000019565)	ENSCHYG00000019679	JUNB (ENSCHYG00000019794)	HOOK2 (ENSCHYG00000019849)	BEST2 (ENSCHYG00000020079)	ENSCHYG00000020173	TRIR (ENSCHYG00000020314)	TNPO2 (ENSCHYG00000020399)	FBXW9 (ENSCHYG00000020520)	ENSCHYG00000020822	DHPS (ENSCHYG00000020871)	WDR83 (ENSCHYG00000021020)	ENSCHYG00000021159	MAN2B1 (ENSCHYG00000021233)	ENSCHYG00000021342
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Carnivora	ANCESTRAL SPECIES	6	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Caniformia	ANCESTRAL SPECIES	4	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00950000182755.b.a.a.a.a.a.a.b.j
Caniformia_b	ANCESTRAL SPECIES	23	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195.d	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00950000182755.b.a.a.a.a.a.a.b.j
Ursidae	ANCESTRAL SPECIES	20	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195.d	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00950000182755.b.a.a.a.a.a.b
Ursus	ANCESTRAL SPECIES	91	ENSGT00900000141021.b.b	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195.c	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00950000182755.b.a.a.a.a.a.b
American black bear	MODERN SPECIES	5330									GADD45GIP1 (ENSUAMG00000010243)	RAD23A (ENSUAMG00000010239)	CALR (ENSUAMG00000010233)	FARSA (ENSUAMG00000010230)	GCDH (ENSUAMG00000010223)	DNASE2 (ENSUAMG00000010218)	MAST1 (ENSUAMG00000010040)	ENSUAMG00000010039 ##22
Polar bear	MODERN SPECIES	464	ENSUMAG00000006017	ENSUMAG00000006021	ENSUMAG00000006026	TRMT1 (ENSUMAG00000006027)	LYL1 (ENSUMAG00000006035)	NFIX (ENSUMAG00000006053)	DAND5 (ENSUMAG00000006065)	ENSUMAG00000006067	RAD23A (ENSUMAG00000006070)	CALR (ENSUMAG00000006097)	FARSA (ENSUMAG00000006110)	SYCE2 (ENSUMAG00000006118)	GCDH (ENSUMAG00000006134)	DNASE2 (ENSUMAG00000006143)	MAST1 (ENSUMAG00000006156)	RTBDN (ENSUMAG00000006251) ##22	ENSUMAG00000006254	PRDX2 (ENSUMAG00000006260)	HOOK2 (ENSUMAG00000006279)	ENSUMAG00000006424	GET3 (ENSUMAG00000006429)	ENSUMAG00000006440	TNPO2 (ENSUMAG00000006504)	FBXW9 (ENSUMAG00000007019)	DHPS (ENSUMAG00000007032)	WDR83 (ENSUMAG00000007054)	WDR83OS (ENSUMAG00000007153)	MAN2B1 (ENSUMAG00000007247)	ENSUMAG00000007577
Giant Panda	MODERN SPECIES	14	NACC1 (ENSAMEG00000012634)	TRMT1 (ENSAMEG00000012598)	LYL1 (ENSAMEG00000026522)	ENSAMEG00000027765	ENSAMEG00000012569	DAND5 (ENSAMEG00000012568)	GADD45GIP1 (ENSAMEG00000012565)	RAD23A (ENSAMEG00000012527)	ENSAMEG00000012487	FARSA (ENSAMEG00000012446)	SYCE2 (ENSAMEG00000012442)	GCDH (ENSAMEG00000012411)	KLF1 (ENSAMEG00000027076)	DNASE2 (ENSAMEG00000012396)	MAST1 (ENSAMEG00000012351)	RTBDN (ENSAMEG00000012347) ##22	RNASEH2A (ENSAMEG00000028673)	PRDX2 (ENSAMEG00000012307)	JUNB (ENSAMEG00000012298)	HOOK2 (ENSAMEG00000012234)	BEST2 (ENSAMEG00000012212)	GET3 (ENSAMEG00000012198)	TRIR (ENSAMEG00000012192)	TNPO2 (ENSAMEG00000012123)	FBXW9 (ENSAMEG00000012106)	ENSAMEG00000012105	DHPS (ENSAMEG00000012097)	WDR83 (ENSAMEG00000012090)	WDR83OS (ENSAMEG00000024064)	MAN2B1 (ENSAMEG00000012013)	ENSAMEG00000025321
Mustelinae	ANCESTRAL SPECIES	45	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195.d	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00950000182755.b.a.a.a.a.a.a.b.j
Ferret	MODERN SPECIES	185	IER2 (ENSMPUG00000018705)	STX10 (ENSMPUG00000004133)	NACC1 (ENSMPUG00000004203)	TRMT1 (ENSMPUG00000004210)	LYL1 (ENSMPUG00000004316)	NFIX (ENSMPUG00000004325)	GADD45GIP1 (ENSMPUG00000004344)	RAD23A (ENSMPUG00000004334)	CALR (ENSMPUG00000004348)	FARSA (ENSMPUG00000004400)	GCDH (ENSMPUG00000004518)	ENSMPUG00000004535	KLF1 (ENSMPUG00000004544)	DNASE2 (ENSMPUG00000004550)	MAST1 (ENSMPUG00000004565)	RTBDN (ENSMPUG00000004582) ##22	RNASEH2A (ENSMPUG00000004586)	PRDX2 (ENSMPUG00000004591)	JUNB (ENSMPUG00000018708)	HOOK2 (ENSMPUG00000004624)	GET3 (ENSMPUG00000004639)	TRIR (ENSMPUG00000004652)	TNPO2 (ENSMPUG00000004663)	FBXW9 (ENSMPUG00000004689)	ENSMPUG00000004759	DHPS (ENSMPUG00000004768)	WDR83 (ENSMPUG00000004831)	WDR83OS (ENSMPUG00000004837)	MAN2B1 (ENSMPUG00000004856)	ENSMPUG00000004877	ENSMPUG00000004884
American mink	MODERN SPECIES	233	STX10 (ENSNVIG00000004211)	NACC1 (ENSNVIG00000004197)	TRMT1 (ENSNVIG00000004121)	LYL1 (ENSNVIG00000004114)	NFIX (ENSNVIG00000004082)	DAND5 (ENSNVIG00000004073)	ENSNVIG00000004059	RAD23A (ENSNVIG00000004028)	CALR (ENSNVIG00000004013)	FARSA (ENSNVIG00000003979)	SYCE2 (ENSNVIG00000003941)	GCDH (ENSNVIG00000003925)	KLF1 (ENSNVIG00000003918)	DNASE2 (ENSNVIG00000003902)	MAST1 (ENSNVIG00000003827)	RTBDN (ENSNVIG00000003814) ##22	RNASEH2A (ENSNVIG00000003791)	PRDX2 (ENSNVIG00000003765)	JUNB (ENSNVIG00000003745)	HOOK2 (ENSNVIG00000003702)	BEST2 (ENSNVIG00000003651)	GET3 (ENSNVIG00000003624)	TRIR (ENSNVIG00000003597)	TNPO2 (ENSNVIG00000003442)	FBXW9 (ENSNVIG00000003405)	ENSNVIG00000003395	DHPS (ENSNVIG00000003322)	WDR83 (ENSNVIG00000003299)	WDR83OS (ENSNVIG00000003265)	MAN2B1 (ENSNVIG00000003244)	ENSNVIG00000003206
Canidae	ANCESTRAL SPECIES		ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00960000189551	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404.b	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00950000182755.b.a.a.a.a.a.a.b.j
Dingo	MODERN SPECIES	112	ENSCAFG00020005909	NACC1 (ENSCAFG00020005901)	TRMT1 (ENSCAFG00020005397)	LYL1 (ENSCAFG00020005371)	NFIX (ENSCAFG00020005352)	DAND5 (ENSCAFG00020005339)	GADD45GIP1 (ENSCAFG00020005337)	RAD23A (ENSCAFG00020005332)	CALR (ENSCAFG00020005320)	FARSA (ENSCAFG00020005315)	ENSCAFG00020005308	GCDH (ENSCAFG00020005305)	KLF1 (ENSCAFG00020005300)	DNASE2 (ENSCAFG00020005295)	MAST1 (ENSCAFG00020005207)	RTBDN (ENSCAFG00020005198) ##22	RNASEH2A (ENSCAFG00020005190)	PRDX2 (ENSCAFG00020005178)	JUNB (ENSCAFG00020005176)	HOOK2 (ENSCAFG00020005171)	BEST2 (ENSCAFG00020005167)	GET3 (ENSCAFG00020005145)	TRIR (ENSCAFG00020005142)	TNPO2 (ENSCAFG00020005115)	FBXW9 (ENSCAFG00020005110)	ENSCAFG00020005105	DHPS (ENSCAFG00020005102)	WDR83 (ENSCAFG00020005098)	WDR83OS (ENSCAFG00020005096)	MAN2B1 (ENSCAFG00020005086)	ENSCAFG00020005083
Dog	MODERN SPECIES	12	STX10 (ENSCAFG00845030435)	NACC1 (ENSCAFG00845030474)	TRMT1 (ENSCAFG00845030492)	ENSCAFG00845030516	NFIX (ENSCAFG00845030565)	DAND5 (ENSCAFG00845015107)	GADD45GIP1 (ENSCAFG00845015125)	RAD23A (ENSCAFG00845015161)	CALR (ENSCAFG00845015220)	FARSA (ENSCAFG00845015291)	SYCE2 (ENSCAFG00845015391)	GCDH (ENSCAFG00845015478)	KLF1 (ENSCAFG00845015569)	DNASE2 (ENSCAFG00845015604)	MAST1 (ENSCAFG00845015670)	RTBDN (ENSCAFG00845015774) ##22	RNASEH2A (ENSCAFG00845015846)	PRDX2 (ENSCAFG00845015946)	JUNB (ENSCAFG00845015989)	HOOK2 (ENSCAFG00845016033)	BEST2 (ENSCAFG00845016163)	GET3 (ENSCAFG00845016222)	TRIR (ENSCAFG00845016276)	TNPO2 (ENSCAFG00845016346)	FBXW9 (ENSCAFG00845016738)	GNG14 (ENSCAFG00845016787)	DHPS (ENSCAFG00845016832)	WDR83 (ENSCAFG00845016879)	WDR83OS (ENSCAFG00845016928)	ENSCAFG00845017174	ENSCAFG00845017657
Red fox	MODERN SPECIES	182	NACC1 (ENSVVUG00000024182)	TRMT1 (ENSVVUG00000024177)	LYL1 (ENSVVUG00000024174)	ENSVVUG00000024173	NFIX (ENSVVUG00000024169)	DAND5 (ENSVVUG00000024168)	GADD45GIP1 (ENSVVUG00000024166)	RAD23A (ENSVVUG00000024155)	CALR (ENSVVUG00000024147)	FARSA (ENSVVUG00000024145)	ENSVVUG00000024144	GCDH (ENSVVUG00000024143)	KLF1 (ENSVVUG00000024142)	DNASE2 (ENSVVUG00000024141)	MAST1 (ENSVVUG00000024135)	RTBDN (ENSVVUG00000024134) ##22	ENSVVUG00000024133	PRDX2 (ENSVVUG00000024132)	JUNB (ENSVVUG00000024130)	HOOK2 (ENSVVUG00000024128)	BEST2 (ENSVVUG00000024122)	ASNA1 (ENSVVUG00000024118)	TRIR (ENSVVUG00000024113)	TNPO2 (ENSVVUG00000023860)	FBXW9 (ENSVVUG00000023840)	GNG14 (ENSVVUG00000023838)	DHPS (ENSVVUG00000023833)	WDR83 (ENSVVUG00000023830)	WDR83OS (ENSVVUG00000023828)	MAN2B1 (ENSVVUG00000023820)	ENSVVUG00000023819
Felidae	ANCESTRAL SPECIES	21	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Panthera	ANCESTRAL SPECIES	15	ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Panthera_a	ANCESTRAL SPECIES		ENSGT00940000163101	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
leopard	MODERN SPECIES	110	STX10 (ENSPPRG00000014043)	NACC1 (ENSPPRG00000012438)	TRMT1 (ENSPPRG00000012117)	LYL1 (ENSPPRG00000008858)	NFIX (ENSPPRG00000007036)	DAND5 (ENSPPRG00000002664)	GADD45GIP1 (ENSPPRG00000002575)	RAD23A (ENSPPRG00000002419)	CALR (ENSPPRG00000000511)	FARSA (ENSPPRG00000000346)	SYCE2 (ENSPPRG00000021729)	GCDH (ENSPPRG00000020586)	KLF1 (ENSPPRG00000016685)	DNASE2 (ENSPPRG00000015132)	MAST1 (ENSPPRG00000014214)	RTBDN (ENSPPRG00000013084) ##22	THSD8 (ENSPPRG00000011424)	RNASEH2A (ENSPPRG00000010585)	PRDX2 (ENSPPRG00000010246)	JUNB (ENSPPRG00000020564)	ENSPPRG00000009177	HOOK2 (ENSPPRG00000009042)	BEST2 (ENSPPRG00000006013)	GET3 (ENSPPRG00000004506)	TRIR (ENSPPRG00000003329)	TNPO2 (ENSPPRG00000003075)	FBXW9 (ENSPPRG00000023858)	ENSPPRG00000020820	DHPS (ENSPPRG00000019899)	WDR83 (ENSPPRG00000014810)	WDR83OS (ENSPPRG00000014585)
lion	MODERN SPECIES	2	STX10 (ENSPLOG00000016759)	NACC1 (ENSPLOG00000016708)	TRMT1 (ENSPLOG00000016470)	LYL1 (ENSPLOG00000016418)	NFIX (ENSPLOG00000016031)	DAND5 (ENSPLOG00000015976)	GADD45GIP1 (ENSPLOG00000015943)	RAD23A (ENSPLOG00000015869)	CALR (ENSPLOG00000015775)	FARSA (ENSPLOG00000015558)	SYCE2 (ENSPLOG00000015466)	GCDH (ENSPLOG00000015264)	KLF1 (ENSPLOG00000015199)	DNASE2 (ENSPLOG00000015142)	MAST1 (ENSPLOG00000014769)	RTBDN (ENSPLOG00000014688) ##22	RNASEH2A (ENSPLOG00000014659)	THSD8 (ENSPLOG00000014622)	PRDX2 (ENSPLOG00000014517)	JUNB (ENSPLOG00000014495)	HOOK2 (ENSPLOG00000014055)	BEST2 (ENSPLOG00000013919)	GET3 (ENSPLOG00000013778)	TRIR (ENSPLOG00000013712)	TNPO2 (ENSPLOG00000013652)	FBXW9 (ENSPLOG00000013556)	ENSPLOG00000013520	DHPS (ENSPLOG00000013447)	WDR83 (ENSPLOG00000013379)	WDR83OS (ENSPLOG00000013336)	MAN2B1 (ENSPLOG00000013282)
Tiger	MODERN SPECIES	580	YJU2B (ENSPTIG00000005555)	ENSPTIG00000008052	STX10 (ENSPTIG00000008273)	TRMT1 (ENSPTIG00000008833)	NFIX (ENSPTIG00000009075)	DAND5 (ENSPTIG00000010336)	ENSPTIG00000010514	RAD23A (ENSPTIG00000010565)	CALR (ENSPTIG00000011152)	FARSA (ENSPTIG00000011502)	SYCE2 (ENSPTIG00000011935)	GCDH (ENSPTIG00000012466)	ENSPTIG00000012710	DNASE2 (ENSPTIG00000012774)	ENSPTIG00000012815	RTBDN (ENSPTIG00000013220) ##22	RNASEH2A (ENSPTIG00000013366)	THSD8 (ENSPTIG00000013637)	PRDX2 (ENSPTIG00000013677)	HOOK2 (ENSPTIG00000013806)	BEST2 (ENSPTIG00000014298)	GET3 (ENSPTIG00000014699)
Cat	MODERN SPECIES	1	IER2 (ENSFCAG00000000485)	STX10 (ENSFCAG00000000484)	NACC1 (ENSFCAG00000025613)	TRMT1 (ENSFCAG00000000483)	ENSFCAG00000000482	NFIX (ENSFCAG00000000481)	DAND5 (ENSFCAG00000043469)	GADD45GIP1 (ENSFCAG00000034587)	RAD23A (ENSFCAG00000023315)	CALR (ENSFCAG00000000479)	FARSA (ENSFCAG00000023511)	GCDH (ENSFCAG00000000477)	KLF1 (ENSFCAG00000026066)	DNASE2 (ENSFCAG00000000476)	MAST1 (ENSFCAG00000000475)	RTBDN (ENSFCAG00000009941) ##22	RNASEH2A (ENSFCAG00000000474)	THSD8 (ENSFCAG00000052414)	PRDX2 (ENSFCAG00000000473)	JUNB (ENSFCAG00000022803)	HOOK2 (ENSFCAG00000028846)	BEST2 (ENSFCAG00000000470)	GET3 (ENSFCAG00000000468)	TRIR (ENSFCAG00000032147)	TNPO2 (ENSFCAG00000000467)	FBXW9 (ENSFCAG00000000466)	GNG14 (ENSFCAG00000021887)	DHPS (ENSFCAG00000000465)	WDR83 (ENSFCAG00000037204)	WDR83OS (ENSFCAG00000000463)	MAN2B1 (ENSFCAG00000029528)
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Chiroptera	ANCESTRAL SPECIES	60	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Microchiroptera	ANCESTRAL SPECIES	51	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00860000135639	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00870000137755	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Greater horseshoe bat	MODERN SPECIES	9	NACC1 (ENSRFEG00010020944)	TRMT1 (ENSRFEG00010020964)	LYL1 (ENSRFEG00010020997)	NFIX (ENSRFEG00010021037)	ENSRFEG00010021172	DAND5 (ENSRFEG00010021178)	GADD45GIP1 (ENSRFEG00010021188)	RAD23A (ENSRFEG00010021198)	CALR (ENSRFEG00010021212)	FARSA (ENSRFEG00010021230)	SYCE2 (ENSRFEG00010021245)	GCDH (ENSRFEG00010021270)	KLF1 (ENSRFEG00010021300)	DNASE2 (ENSRFEG00010021305)	MAST1 (ENSRFEG00010021327)	RTBDN (ENSRFEG00010021362) ##22	ENSRFEG00010021370	RNASEH2A (ENSRFEG00010021379)	THSD8 (ENSRFEG00010021389)	PRDX2 (ENSRFEG00010021398)	JUNB (ENSRFEG00010021403)	HOOK2 (ENSRFEG00010021413)	BEST2 (ENSRFEG00010021431)	GET3 (ENSRFEG00010021439)	TRIR (ENSRFEG00010021446)	TNPO2 (ENSRFEG00010021459)	FBXW9 (ENSRFEG00010021482)	ENSRFEG00010021496	DHPS (ENSRFEG00010021515)	WDR83 (ENSRFEG00010021533)	WDR83OS (ENSRFEG00010021544)
Microbat	MODERN SPECIES	1559			NACC1 (ENSMLUG00000003937)	TRMT1 (ENSMLUG00000012809)	LYL1 (ENSMLUG00000012805)	NFIX (ENSMLUG00000012794)	GADD45GIP1 (ENSMLUG00000012790)	RAD23A (ENSMLUG00000012783)	ENSMLUG00000012776	FARSA (ENSMLUG00000012767)	SYCE2 (ENSMLUG00000004284)	GCDH (ENSMLUG00000012753)	KLF1 (ENSMLUG00000012751)	DNASE2 (ENSMLUG00000023519)	MAST1 (ENSMLUG00000012736)	RTBDN (ENSMLUG00000012729) ##22	RNASEH2A (ENSMLUG00000012723)	PRDX2 (ENSMLUG00000012718)	JUNB (ENSMLUG00000012714)	HOOK2 (ENSMLUG00000012699)	BEST2 (ENSMLUG00000029360)	GET3 (ENSMLUG00000012694)	TRIR (ENSMLUG00000012689)	TNPO2 (ENSMLUG00000012669)	FBXW9 (ENSMLUG00000012655)	ENSMLUG00000024606	DHPS (ENSMLUG00000012647)	WDR83 (ENSMLUG00000012637)	WDR83OS (ENSMLUG00000012633)
Megabat	MODERN SPECIES	292							GADD45GIP1 (ENSPVAG00000014719)	RAD23A (ENSPVAG00000014717)	CALR (ENSPVAG00000014715)	FARSA (ENSPVAG00000014714)	SYCE2 (ENSPVAG00000014713)	GCDH (ENSPVAG00000014712)	KLF1 (ENSPVAG00000014711)	DNASE2 (ENSPVAG00000014710)	MAST1 (ENSPVAG00000014707)	RTBDN (ENSPVAG00000014705) ##22	RNASEH2A (ENSPVAG00000014703)	PRDX2 (ENSPVAG00000014702)	ENSPVAG00000014700	BEST2 (ENSPVAG00000014699)	GET3 (ENSPVAG00000014698)	TRIR (ENSPVAG00000014697)
Equus	ANCESTRAL SPECIES	55	ENSGT00940000159327	ENSGT00530000063646.b	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00530000063926.b	ENSGT00390000013719	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a	ENSGT00950000182755.b.a.a.a.a.a.a.b.j
Donkey	MODERN SPECIES	12	NACC1 (ENSEASG00005004040)	TRMT1 (ENSEASG00005004050)	LYL1 (ENSEASG00005024646)	NFIX (ENSEASG00005004061)	ENSEASG00005028746	DAND5 (ENSEASG00005004075)	GADD45GIP1 (ENSEASG00005035955)	RAD23A (ENSEASG00005004081)	CALR (ENSEASG00005004089)	FARSA (ENSEASG00005004093)	ENSEASG00005034575	GCDH (ENSEASG00005004102)	KLF1 (ENSEASG00005004104)	DNASE2 (ENSEASG00005004105)	MAST1 (ENSEASG00005004109)	RTBDN (ENSEASG00005004115) ##22	RNASEH2A (ENSEASG00005004118)	JUNB (ENSEASG00005032517)	PRDX2 (ENSEASG00005004125)	HOOK2 (ENSEASG00005004135)	BEST2 (ENSEASG00005004149)	GET3 (ENSEASG00005004153)	TRIR (ENSEASG00005004158)	TNPO2 (ENSEASG00005004160)	FBXW9 (ENSEASG00005004179)	ENSEASG00005024096	DHPS (ENSEASG00005004189)	WDR83 (ENSEASG00005004195)	WDR83OS (ENSEASG00005036170)	ENSEASG00005004211	ENSEASG00005031648
Horse	MODERN SPECIES	28	NACC1 (ENSECAG00000015051)	TRMT1 (ENSECAG00000016149)	LYL1 (ENSECAG00000028699)	NFIX (ENSECAG00000019690)	ENSECAG00000031092	GADD45GIP1 (ENSECAG00000003766)	DAND5 (ENSECAG00000024508)	RAD23A (ENSECAG00000024607)	CALR (ENSECAG00000008164)	FARSA (ENSECAG00000015139)	SYCE2 (ENSECAG00000052051)	GCDH (ENSECAG00000012495)	KLF1 (ENSECAG00000027715)	DNASE2 (ENSECAG00000018970)	MAST1 (ENSECAG00000022473)	RTBDN (ENSECAG00000001223) ##22	RNASEH2A (ENSECAG00000007013)	JUNB (ENSECAG00000003816)	PRDX2 (ENSECAG00000011541)	HOOK2 (ENSECAG00000014343)	BEST2 (ENSECAG00000038067)	GET3 (ENSECAG00000007103)	TRIR (ENSECAG00000012154)	TNPO2 (ENSECAG00000013673)	FBXW9 (ENSECAG00000005017)	GNG14 (ENSECAG00000008886)	DHPS (ENSECAG00000009177)	WDR83 (ENSECAG00000019788)	WDR83OS (ENSECAG00000058865)	MAN2B1 (ENSECAG00000022546)	ENSECAG00000034536
Sauria	ANCESTRAL SPECIES	22	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00860000135639	ENSGT00390000013719	ENSGT00950000182917.a.b.b	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000164108.a	ENSGT00940000164623.C	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Archelosauria	ANCESTRAL SPECIES	28	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00950000185200	ENSGT00390000013719	ENSGT00950000182917.a.b.b	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000164108.a	ENSGT00940000164623.C	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00940000156708.a.a	ENSGT00390000006806	ENSGT01100000263497.E.a.a	ENSGT00390000008063	ENSGT00940000159016	ENSGT00390000002121	ENSGT01030000234638.b.a.a
Archosauria	ANCESTRAL SPECIES	11	ENSGT00940000154587.a.a	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000161237	ENSGT00940000163316.a.a	ENSGT00940000163316.b	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000003464	ENSGT00740000116213	ENSGT01030000235254	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A	ENSGT00510000049326.a	ENSGT00940000158362
Aves	ANCESTRAL SPECIES	7	ENSGT00940000154587.a.a	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000161237	ENSGT00940000163316.a.a	ENSGT00940000163316.b	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000003464	ENSGT01030000235254	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A	ENSGT00510000049326.a	ENSGT00940000158362	ENSGT00390000018302
Neognathae	ANCESTRAL SPECIES	8	ENSGT00940000154587.a.a	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000161237	ENSGT00940000163316.a.a	ENSGT00940000163316.b	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000003464	ENSGT01030000235254	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A	ENSGT00510000049326.a	ENSGT00940000158362	ENSGT00390000018302
Galloanserae	ANCESTRAL SPECIES	8	ENSGT00940000154587.a.a	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000161237	ENSGT00940000163316.a.a	ENSGT00940000163316.b	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000003464	ENSGT01030000235254	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A	ENSGT00510000049326.a	ENSGT00940000158362	ENSGT00390000018302
Phasianidae	ANCESTRAL SPECIES	7	ENSGT00940000154587.a.a	ENSGT00390000008086	ENSGT00940000161237	ENSGT00940000155505.a	ENSGT00940000163316.a.a	ENSGT00940000163316.b	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b.`b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000003464	ENSGT01030000235254	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A	ENSGT00510000049326.a	ENSGT00940000158362	ENSGT00390000018302
Phasianidae_b	ANCESTRAL SPECIES	7	ENSGT01050000244898.a.a.b	ENSGT00940000154587.a.a	ENSGT00940000161237	ENSGT00940000155505.a	ENSGT00940000163316.a.a	ENSGT00940000163316.b	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b.`b.a	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000003464	ENSGT01030000235254	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A	ENSGT00510000049326.a	ENSGT00940000158362	ENSGT00390000018302
Chicken	MODERN SPECIES	37	ATPAF1 (ENSGALG00010022867)	MOB3C (ENSGALG00010022860)	MKNK1 (ENSGALG00010023356)	DMBX1 (ENSGALG00010022675)	VDHAP (ENSGALG00010027076)	ENSGALG00010022999	NSUN4 (ENSGALG00010023124)	UQCRHL (ENSGALG00010023114)	LRRC41 (ENSGALG00010023090)	RAD54L (ENSGALG00010023052)	LURAP1 (ENSGALG00010023097)	POMGNT1 (ENSGALG00010023073)	TSPAN1 (ENSGALG00010023330)	PIK3R3 (ENSGALG00010023309)	ENSGALG00010026498	RBP (ENSGALG00010026367) ##22	IPP (ENSGALG00010026335)	TMEM69 (ENSGALG00010026325)	GPBP1L1 (ENSGALG00010026321)	NASP (ENSGALG00010026287)	AKR1A1 (ENSGALG00010026213)	PRDX1 (ENSGALG00010026128)	MMACHC (ENSGALG00010026115)	ENSGALG00010026111	TESK2 (ENSGALG00010026106)	TOE1 (ENSGALG00010026093)	MUTYH (ENSGALG00010026083)	HPDL (ENSGALG00010026073)	SELENOP2 (ENSGALG00010026066)	ZSWIM5 (ENSGALG00010026010)	UROD (ENSGALG00010025959)
Turkey	MODERN SPECIES	1	ENSMGAG00000022555	ENSMGAG00000010284	ENSMGAG00000010326	ZSWIM5 (ENSMGAG00000010341)	ENSMGAG00000017218	ENSMGAG00000010370	ENSMGAG00000010366	TOE1 (ENSMGAG00000010387)	ENSMGAG00000010395	ENSMGAG00000021918	ENSMGAG00000022085	ENSMGAG00000010417	ENSMGAG00000010420	ENSMGAG00000010441	ENSMGAG00000010470	ENSMGAG00000010515 ##22	IPP (ENSMGAG00000010501)	TMEM69 (ENSMGAG00000010500)	ENSMGAG00000020097	GPBP1L1 (ENSMGAG00000019238)	ENSMGAG00000010530	PIK3R3 (ENSMGAG00000010604)	ENSMGAG00000010574	ENSMGAG00000010616	LURAP1 (ENSMGAG00000010613)	ENSMGAG00000010634	ENSMGAG00000020766	NSUN4 (ENSMGAG00000010675)	ENSMGAG00000010666	LRRC41 (ENSMGAG00000010654)	ENSMGAG00000010684
Japanese quail	MODERN SPECIES	26	MOB3C (ENSCJPG00005010071)	ENSCJPG00005010070	TMEM275 (ENSCJPG00005010069)	DMBX1 (ENSCJPG00005010066)	FAAH (ENSCJPG00005010065)	ENSCJPG00005010064	ENSCJPG00005010063	NSUN4 (ENSCJPG00005010062)	LRRC41 (ENSCJPG00005010061)	RAD54L (ENSCJPG00005010060)	LURAP1 (ENSCJPG00005010059)	POMGNT1 (ENSCJPG00005010058)	TSPAN1 (ENSCJPG00005010057)	PIK3R3 (ENSCJPG00005010056)	MAST2 (ENSCJPG00005010055)	ENSCJPG00005010054 ##22	IPP (ENSCJPG00005010026)	TMEM69 (ENSCJPG00005010025)	GPBP1L1 (ENSCJPG00005009998)	NASP (ENSCJPG00005009996)	AKR1A1 (ENSCJPG00005009995)	PRDX1 (ENSCJPG00005009947)	MMACHC (ENSCJPG00005009945)	TESK2 (ENSCJPG00005009939)	TOE1 (ENSCJPG00005009935)	ENSCJPG00005009769	ENSCJPG00005009768	ZSWIM5 (ENSCJPG00005009766)	UROD (ENSCJPG00005009763)	ENSCJPG00005009761	ENSCJPG00005009759
Anatidae	ANCESTRAL SPECIES	5	ENSGT00940000154587.a.a	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000161237	ENSGT00940000163316.a.a	ENSGT00940000163316.b	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000003464	ENSGT01030000235254	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A	ENSGT00510000049326.a	ENSGT00940000158362	ENSGT00390000018302
Duck	MODERN SPECIES	26	ENSAPLG00000008479	TMEM275 (ENSAPLG00000018210)	DMBX1 (ENSAPLG00000008404)	FAAH (ENSAPLG00000007898)	ENSAPLG00000007474	ENSAPLG00000007374	NSUN4 (ENSAPLG00000007241)	ENSAPLG00000007037	LRRC41 (ENSAPLG00000006638)	RAD54L (ENSAPLG00000006389)	LURAP1 (ENSAPLG00000030348)	POMGNT1 (ENSAPLG00000007878)	TSPAN1 (ENSAPLG00000007619)	PIK3R3 (ENSAPLG00000006823)	MAST2 (ENSAPLG00000006200)	ENSAPLG00000006104 ##22	IPP (ENSAPLG00000005658)	TMEM69 (ENSAPLG00000005652)	GPBP1L1 (ENSAPLG00000005350)	NASP (ENSAPLG00000004941)	AKR1A1 (ENSAPLG00000007260)	PRDX1 (ENSAPLG00000007243)	MMACHC (ENSAPLG00000007238)	ENSAPLG00000007235	TESK2 (ENSAPLG00000007216)	TOE1 (ENSAPLG00000007214)	ZSWIM5 (ENSAPLG00000009826)	ENSAPLG00000010545	ENSAPLG00000011298	ENSAPLG00000020070	ENSAPLG00000011981
Pink-footed goose	MODERN SPECIES	1	TMEM275 (ENSABRG00000016800)	DMBX1 (ENSABRG00000016803)	ENSABRG00000016807	ENSABRG00000016808	ENSABRG00000016829	NSUN4 (ENSABRG00000016836)	ENSABRG00000016838	LRRC41 (ENSABRG00000016846)	RAD54L (ENSABRG00000016858)	LURAP1 (ENSABRG00000016908)	POMGNT1 (ENSABRG00000016911)	TSPAN1 (ENSABRG00000016928)	ENSABRG00000016940	PIK3R3 (ENSABRG00000016952)	MAST2 (ENSABRG00000016971)	ENSABRG00000017000 ##22	IPP (ENSABRG00000017006)	TMEM69 (ENSABRG00000017007)	GPBP1L1 (ENSABRG00000017008)	NASP (ENSABRG00000017014)	AKR1A1 (ENSABRG00000017018)	PRDX1 (ENSABRG00000017021)	MMACHC (ENSABRG00000017026)	ENSABRG00000017035	TESK2 (ENSABRG00000017040)	TOE1 (ENSABRG00000017043)	MUTYH (ENSABRG00000017058)	HPDL (ENSABRG00000017164)	ENSABRG00000017170	ZSWIM5 (ENSABRG00000017186)	UROD (ENSABRG00000017296)
Neognathae_b	ANCESTRAL SPECIES	10	ENSGT00940000154587.a.a	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000161237	ENSGT00940000163316.a.a	ENSGT00940000163316.b	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000003464	ENSGT01030000235254	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A	ENSGT00510000049326.a	ENSGT00940000158362	ENSGT00390000018302
Passeriformes	ANCESTRAL SPECIES	8	ENSGT00940000154587.a.a	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000161237	ENSGT00940000163316.a.a	ENSGT00940000163316.b	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000003464	ENSGT01030000235254	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A	ENSGT00510000049326.a	ENSGT00940000158362	ENSGT00390000018302
Passeriformes_d	ANCESTRAL SPECIES	9	ENSGT00940000154587.a.a	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000161237	ENSGT00940000163316.a.a	ENSGT00940000163316.b	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000003464	ENSGT01030000235254	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A	ENSGT00510000049326.a	ENSGT00940000158362	ENSGT00390000018302
Passeriformes_g	ANCESTRAL SPECIES	10	ENSGT00940000154587.a.a	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000161237	ENSGT00940000163316.a.a	ENSGT00940000163316.b	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000003464	ENSGT01030000235254	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A	ENSGT00940000158362	ENSGT00390000018302	ENSGT00940000159923.a
Passeroidea	ANCESTRAL SPECIES	9	ENSGT00940000154587.a.a	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000161237	ENSGT00940000163316.a.a	ENSGT00940000163316.b	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000003464	ENSGT01030000235254	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A	ENSGT00940000158362	ENSGT00390000018302	ENSGT00940000159923.a
Zebra finch	MODERN SPECIES	30	ENSTGUG00000008358	TMEM275 (ENSTGUG00000027598)	DMBX1 (ENSTGUG00000008353)	FAAH (ENSTGUG00000008323)	ENSTGUG00000017201	ENSTGUG00000008319	NSUN4 (ENSTGUG00000021857)	UQCRH (ENSTGUG00000008278)	LRRC41 (ENSTGUG00000008262)	RAD54L (ENSTGUG00000008233)	LURAP1 (ENSTGUG00000020108)	POMGNT1 (ENSTGUG00000008179)	TSPAN1 (ENSTGUG00000008165)	PIK3R3 (ENSTGUG00000008122)	MAST2 (ENSTGUG00000008089)	ENSTGUG00000020094 ##22	IPP (ENSTGUG00000008061)	TMEM69 (ENSTGUG00000008059)	GPBP1L1 (ENSTGUG00000008044)	NASP (ENSTGUG00000008032)	AKR1A1 (ENSTGUG00000007993)	PRDX1 (ENSTGUG00000023194)	MMACHC (ENSTGUG00000028995)	ENSTGUG00000028416	TESK2 (ENSTGUG00000007934)	TOE1 (ENSTGUG00000007927)	MUTYH (ENSTGUG00000007890)	HPDL (ENSTGUG00000007887)	ZSWIM5 (ENSTGUG00000007862)	UROD (ENSTGUG00000007828)	HECTD3 (ENSTGUG00000007801)
Common canary	MODERN SPECIES	9	MOB3C (ENSSCAG00000003260)	ENSSCAG00000003252	TMEM275 (ENSSCAG00000003248)	DMBX1 (ENSSCAG00000003244)	ENSSCAG00000003239	ENSSCAG00000003233	NSUN4 (ENSSCAG00000003229)	ENSSCAG00000003227	LRRC41 (ENSSCAG00000003220)	RAD54L (ENSSCAG00000003152)	LURAP1 (ENSSCAG00000003134)	POMGNT1 (ENSSCAG00000003126)	TSPAN1 (ENSSCAG00000003114)	PIK3R3 (ENSSCAG00000003105)	MAST2 (ENSSCAG00000001759)	ENSSCAG00000001368 ##22	IPP (ENSSCAG00000001357)	TMEM69 (ENSSCAG00000001344)	GPBP1L1 (ENSSCAG00000001337)	ENSSCAG00000001327	ENSSCAG00000001319	AKR1A1 (ENSSCAG00000001310)	PRDX1 (ENSSCAG00000001283)	MMACHC (ENSSCAG00000001267)	ENSSCAG00000001259	TESK2 (ENSSCAG00000001234)	TOE1 (ENSSCAG00000001216)	MUTYH (ENSSCAG00000001091)	HPDL (ENSSCAG00000001046)	ZSWIM5 (ENSSCAG00000001001)	UROD (ENSSCAG00000000983)
Medium ground finch	MODERN SPECIES	50	ENSGFOG00000010874	ATPAF1 (ENSGFOG00000010864)	MOB3C (ENSGFOG00000010857)	ENSGFOG00000010842	DMBX1 (ENSGFOG00000010834)	FAAH (ENSGFOG00000010792)	ENSGFOG00000010777	NSUN4 (ENSGFOG00000010770)	ENSGFOG00000010765	LRRC41 (ENSGFOG00000010756)	RAD54L (ENSGFOG00000010680)	POMGNT1 (ENSGFOG00000010649)	TSPAN1 (ENSGFOG00000010599)	PIK3R3 (ENSGFOG00000010593)	MAST2 (ENSGFOG00000010136)	ENSGFOG00000010077 ##22	IPP (ENSGFOG00000010074)	TMEM69 (ENSGFOG00000010069)	GPBP1L1 (ENSGFOG00000010064)	NASP (ENSGFOG00000010057)	AKR1A1 (ENSGFOG00000010053)	PRDX1 (ENSGFOG00000010049)	MMACHC (ENSGFOG00000010046)	ENSGFOG00000010044	TESK2 (ENSGFOG00000010039)	TOE1 (ENSGFOG00000009762)	ENSGFOG00000009742	ENSGFOG00000009736	ZSWIM5 (ENSGFOG00000009718)	UROD (ENSGFOG00000009714)	HECTD3 (ENSGFOG00000009695)
Flycatcher	MODERN SPECIES	27	ATPAF1 (ENSFALG00000028925)	MOB3C (ENSFALG00000009374)	ENSFALG00000009378	ENSFALG00000024196	ENSFALG00000009400	ENSFALG00000009429	NSUN4 (ENSFALG00000028643)	ENSFALG00000028231	LRRC41 (ENSFALG00000009461)	RAD54L (ENSFALG00000009480)	LURAP1 (ENSFALG00000009504)	POMGNT1 (ENSFALG00000009510)	TSPAN1 (ENSFALG00000009516)	PIK3R3 (ENSFALG00000009521)	MAST2 (ENSFALG00000009528)	ENSFALG00000009535 ##22	IPP (ENSFALG00000009544)	TMEM69 (ENSFALG00000009547)	GPBP1L1 (ENSFALG00000009548)	AKR1A1 (ENSFALG00000009600)	NASP (ENSFALG00000009566)	PRDX1 (ENSFALG00000009626)	MMACHC (ENSFALG00000026112)	ENSFALG00000009643	TESK2 (ENSFALG00000026966)	TOE1 (ENSFALG00000005017)	ENSFALG00000005024	HPDL (ENSFALG00000005038)	ENSFALG00000005047	ZSWIM5 (ENSFALG00000005058)	UROD (ENSFALG00000005074)
Great tit	MODERN SPECIES	28	ENSPMJG00000019632	TMEM275 (ENSPMJG00000019631)	DMBX1 (ENSPMJG00000019630)	FAAH (ENSPMJG00000019628)	ENSPMJG00000019627	ENSPMJG00000019624	NSUN4 (ENSPMJG00000019620)	ENSPMJG00000019616	LRRC41 (ENSPMJG00000019615)	RAD54L (ENSPMJG00000019613)	LURAP1 (ENSPMJG00000019612)	POMGNT1 (ENSPMJG00000019610)	TSPAN1 (ENSPMJG00000019609)	PIK3R3 (ENSPMJG00000019608)	MAST2 (ENSPMJG00000019600)	ENSPMJG00000019595 ##22	IPP (ENSPMJG00000019594)	TMEM69 (ENSPMJG00000019593)	GPBP1L1 (ENSPMJG00000019592)	ENSPMJG00000019591	AKR1A1 (ENSPMJG00000019587)	PRDX1 (ENSPMJG00000019585)	MMACHC (ENSPMJG00000019583)	ENSPMJG00000019579	TESK2 (ENSPMJG00000019575)	TOE1 (ENSPMJG00000019573)	MUTYH (ENSPMJG00000019571)	HPDL (ENSPMJG00000019570)	ENSPMJG00000019569	ZSWIM5 (ENSPMJG00000019567)	UROD (ENSPMJG00000019565)
Neognathae_c	ANCESTRAL SPECIES	7	ENSGT00940000154587.a.a	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000161237	ENSGT00940000163316.a.a	ENSGT00940000163316.b	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000003464	ENSGT01030000235254	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A	ENSGT00510000049326.a	ENSGT00940000158362	ENSGT00390000018302
Kakapo	MODERN SPECIES	25	ENSSHBG00005006177	TMEM275 (ENSSHBG00005006147)	DMBX1 (ENSSHBG00005006125)	FAAH (ENSSHBG00005006094)	ENSSHBG00005006062	ENSSHBG00005006024	NSUN4 (ENSSHBG00005006011)	ENSSHBG00005006002	LRRC41 (ENSSHBG00005005972)	RAD54L (ENSSHBG00005005827)	LURAP1 (ENSSHBG00005005795)	POMGNT1 (ENSSHBG00005005775)	TSPAN1 (ENSSHBG00005005758)	PIK3R3 (ENSSHBG00005005718)	MAST2 (ENSSHBG00005005596)	ENSSHBG00005005524 ##22	IPP (ENSSHBG00005005497)	TMEM69 (ENSSHBG00005005478)	GPBP1L1 (ENSSHBG00005005468)	NASP (ENSSHBG00005005428)	AKR1A1 (ENSSHBG00005005391)	PRDX1 (ENSSHBG00005005359)	MMACHC (ENSSHBG00005005343)	ENSSHBG00005005335	ENSSHBG00005005312	TOE1 (ENSSHBG00005000742)	MUTYH (ENSSHBG00005000724)	ENSSHBG00005000704	ENSSHBG00005000689	ZSWIM5 (ENSSHBG00005000679)	UROD (ENSSHBG00005017176)
Golden eagle	MODERN SPECIES	3	MOB3C (ENSACCG00020009219)	ENSACCG00020009204	DMBX1 (ENSACCG00020009185)	FAAH (ENSACCG00020009164)	ENSACCG00020009114	ENSACCG00020009073	ENSACCG00020009065	LRRC41 (ENSACCG00020009052)	RAD54L (ENSACCG00020009028)	ENSACCG00020009010	LURAP1 (ENSACCG00020008999)	POMGNT1 (ENSACCG00020008982)	TSPAN1 (ENSACCG00020008954)	PIK3R3 (ENSACCG00020008935)	MAST2 (ENSACCG00020008823)	ENSACCG00020008724 ##22	IPP (ENSACCG00020008705)	TMEM69 (ENSACCG00020008697)	GPBP1L1 (ENSACCG00020008683)	NASP (ENSACCG00020008664)	AKR1A1 (ENSACCG00020008647)	PRDX1 (ENSACCG00020008632)	MMACHC (ENSACCG00020008615)	ENSACCG00020008609	TESK2 (ENSACCG00020008598)	TOE1 (ENSACCG00020008579)	MUTYH (ENSACCG00020008559)	ENSACCG00020008542	ENSACCG00020008533	ZSWIM5 (ENSACCG00020008509)	UROD (ENSACCG00020008481)
African ostrich	MODERN SPECIES	819														PIK3R3 (ENSSCUG00000012437)	MAST2 (ENSSCUG00000012361)	ENSSCUG00000012303 ##22	IPP (ENSSCUG00000012299)	TMEM69 (ENSSCUG00000012298)	GPBP1L1 (ENSSCUG00000012296)	NASP (ENSSCUG00000012294)	AKR1A1 (ENSSCUG00000012291)	PRDX1 (ENSSCUG00000012290)	MMACHC (ENSSCUG00000012289)	ENSSCUG00000012286	ENSSCUG00000012283	TESK2 (ENSSCUG00000012281)	TOE1 (ENSSCUG00000012279)	ENSSCUG00000012275	ENSSCUG00000012272	HPDL (ENSSCUG00000012271)	ENSSCUG00000012269
Australian saltwater crocodile	MODERN SPECIES	28	TMEM275 (ENSCPRG00005017950)	DMBX1 (ENSCPRG00005017947)	RAD54L (ENSCPRG00005017943)	ENSCPRG00005017941	ENSCPRG00005017938	ENSCPRG00005017934	NSUN4 (ENSCPRG00005017933)	ENSCPRG00005017930	LRRC41 (ENSCPRG00005017926)	LURAP1 (ENSCPRG00005017917)	POMGNT1 (ENSCPRG00005017911)	TSPAN1 (ENSCPRG00005017902)	PIK3R3 (ENSCPRG00005017894)	ENSCPRG00005017887	MAST2 (ENSCPRG00005017882)	ENSCPRG00005017875 ##22	IPP (ENSCPRG00005017866)	GPBP1L1 (ENSCPRG00005017857)	NASP (ENSCPRG00005017842)	AKR1A1 (ENSCPRG00005017833)	PRDX1 (ENSCPRG00005017830)	MMACHC (ENSCPRG00005017827)	ENSCPRG00005017821	ENSCPRG00005017818	TESK2 (ENSCPRG00005017812)	TOE1 (ENSCPRG00005017804)	MUTYH (ENSCPRG00005017799)	ENSCPRG00005017796	ZSWIM5 (ENSCPRG00005017762)	UROD (ENSCPRG00005017736)	HECTD3 (ENSCPRG00005017593)
Cryptodira	ANCESTRAL SPECIES	39	ENSGT00390000016735	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00390000013719	ENSGT00950000182917.a.b.b	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a	ENSGT00390000006387	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000164108.a	ENSGT00940000164623.C	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00940000167241	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000018130.b	ENSGT00390000003464	ENSGT00740000116213
Testudinoidea	ANCESTRAL SPECIES	36	ENSGT00940000162404	ENSGT00950000182916.a.b.a.a.a.b.b	ENSGT00390000013719	ENSGT00950000182917.a.b.b	ENSGT00390000012078.a.b	ENSGT00950000182915.b.b.a.a.b	ENSGT00390000006387	ENSGT00940000163154.B.e.b.d.a	ENSGT00390000004872	ENSGT00940000158116	ENSGT00940000161856	ENSGT00390000002634.a	ENSGT00940000164108.a	ENSGT00940000164623.C	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00940000167241	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000018130.b	ENSGT00390000003464	ENSGT00740000116213	ENSGT01030000235254	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A
Testudinidae	ANCESTRAL SPECIES	33	ENSGT00940000155505.a	ENSGT00940000163316.b	ENSGT00940000161237	ENSGT00940000163316.a.a	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00950000185760	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00940000167241	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000018130.b	ENSGT00390000003464	ENSGT00740000116213	ENSGT00980000198729	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES	965																ENSCABG00000008463 ##22	IPP (ENSCABG00000008461)
Abingdon island giant tortoise	MODERN SPECIES	2622															MAST1 (ENSCABG00000010109)	ENSCABG00000010110 ##22	RNASEH2A (ENSCABG00000010111)	PRDX2 (ENSCABG00000010112)	JUNB (ENSCABG00000010113)	HOOK2 (ENSCABG00000010114)	BEST2 (ENSCABG00000010115)	ENSCABG00000010116	GET3 (ENSCABG00000010117)	TRIR (ENSCABG00000010118)	ENSCABG00000010120	TNPO2 (ENSCABG00000010122)	FBXW9 (ENSCABG00000010128)	ENSCABG00000010131	DHPS (ENSCABG00000010139)	WDR83OS (ENSCABG00000010187)	ENSCABG00000010190
Goode s thornscrub tortoise	DUPLICATION
Goode s thornscrub tortoise	MODERN SPECIES	22	ENSGEVG00005019576	DMBX1 (ENSGEVG00005019588)	ENSGEVG00005019602	FAAH (ENSGEVG00005019620)	ENSGEVG00005019637	NSUN4 (ENSGEVG00005019648)	ENSGEVG00005019659	LRRC41 (ENSGEVG00005019676)	RAD54L (ENSGEVG00005019699)	LURAP1 (ENSGEVG00005019716)	POMGNT1 (ENSGEVG00005019721)	TSPAN1 (ENSGEVG00005019729)	ENSGEVG00005019734	PIK3R3 (ENSGEVG00005019739)	MAST2 (ENSGEVG00005020025)	ENSGEVG00005020502 ##22	IPP (ENSGEVG00005020503)	TMEM69 (ENSGEVG00005020507)	GPBP1L1 (ENSGEVG00005020508)	ENSGEVG00005020516	NASP (ENSGEVG00005020524)	AKR1A1 (ENSGEVG00005020534)	PRDX1 (ENSGEVG00005020539)	ENSGEVG00005008538	MMACHC (ENSGEVG00005008601)	ENSGEVG00005008619	ENSGEVG00005008647	TESK2 (ENSGEVG00005008687)	TOE1 (ENSGEVG00005008798)	MUTYH (ENSGEVG00005008835)	HPDL (ENSGEVG00005008936)
Goode s thornscrub tortoise	MODERN SPECIES	152	ACP5 (ENSGEVG00005019364)	LYL1 (ENSGEVG00005019355)	NFIX (ENSGEVG00005019340)	GADD45GIP1 (ENSGEVG00005019331)	ENSGEVG00005019296	RAD23A (ENSGEVG00005019280)	CALR (ENSGEVG00005019273)	FARSA (ENSGEVG00005019260)	ENSGEVG00005019250	GCDH (ENSGEVG00005019243)	KLF1 (ENSGEVG00005019235)	DNASE2 (ENSGEVG00005019228)	ENSGEVG00005019218	ENSGEVG00005019202	ENSGEVG00005019190	ENSGEVG00005019178 ##22	RNASEH2A (ENSGEVG00005019166)	PRDX2 (ENSGEVG00005019161)	JUNB (ENSGEVG00005019155)	HOOK2 (ENSGEVG00005019137)	BEST2 (ENSGEVG00005019104)	GET3 (ENSGEVG00005019088)	TRIR (ENSGEVG00005019081)	ENSGEVG00005019076	TNPO2 (ENSGEVG00005019053)	FBXW9 (ENSGEVG00005019042)	ENSGEVG00005019028	DHPS (ENSGEVG00005019003)	WDR83 (ENSGEVG00005018986)	WDR83OS (ENSGEVG00005018973)	MAN2B1 (ENSGEVG00005018951)
Emydidae	ANCESTRAL SPECIES	22	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000163316.b	ENSGT00940000163316.a.a	ENSGT00940000161237	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00940000167241	ENSGT00390000016650	ENSGT00940000156539	ENSGT00940000154277.a.b	ENSGT00390000018130.b	ENSGT00390000003464	ENSGT00740000116213	ENSGT01030000235254	ENSGT00940000158765	ENSGT00940000153167.B	ENSGT00510000047220	ENSGT00530000063474.A
Three-toed box turtle	MODERN SPECIES	47	ENSTMTG00000010437	DMBX1 (ENSTMTG00000010467)	ENSTMTG00000010486	ENSTMTG00000010541	ENSTMTG00000010676	ENSTMTG00000010712	NSUN4 (ENSTMTG00000010730)	LRRC41 (ENSTMTG00000010766)	RAD54L (ENSTMTG00000011057)	ENSTMTG00000011632	LURAP1 (ENSTMTG00000011643)	POMGNT1 (ENSTMTG00000011662)	TSPAN1 (ENSTMTG00000011697)	PIK3R3 (ENSTMTG00000000080)	MAST2 (ENSTMTG00000000486)	ENSTMTG00000001174 ##22	IPP (ENSTMTG00000001195)	TMEM69 (ENSTMTG00000001208)	GPBP1L1 (ENSTMTG00000001221)	ENSTMTG00000001232	NASP (ENSTMTG00000001252)	AKR1A1 (ENSTMTG00000001274)	PRDX1 (ENSTMTG00000001284)	ENSTMTG00000001298	MMACHC (ENSTMTG00000001321)	TESK2 (ENSTMTG00000001336)	TOE1 (ENSTMTG00000001348)	MUTYH (ENSTMTG00000001360)	HPDL (ENSTMTG00000001375)	ENSTMTG00000001383	ZSWIM5 (ENSTMTG00000001444)
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	17	ENSCPBG00000005892	ING1 (ENSCPBG00000005890)	CARS2 (ENSCPBG00000005880)	NAXD (ENSCPBG00000005870)	RAB20 (ENSCPBG00000005866)	COL4A2 (ENSCPBG00000005855)	ENSCPBG00000005733	IRS2 (ENSCPBG00000005697)	LRRC41 (ENSCPBG00000005687)	RAD54L (ENSCPBG00000005675)	LURAP1 (ENSCPBG00000005664)	POMGNT1 (ENSCPBG00000005648)	TSPAN1 (ENSCPBG00000005640)	PIK3R3 (ENSCPBG00000005617)	MAST2 (ENSCPBG00000005533)	ENSCPBG00000005508 ##22	IPP (ENSCPBG00000005502)	TMEM69 (ENSCPBG00000005495)	GPBP1L1 (ENSCPBG00000005483)	ENSCPBG00000005462	NASP (ENSCPBG00000005434)	AKR1A1 (ENSCPBG00000005428)	PRDX1 (ENSCPBG00000005425)	ENSCPBG00000005423	MMACHC (ENSCPBG00000005421)	ENSCPBG00000005415	ENSCPBG00000005411	TESK2 (ENSCPBG00000005403)	TOE1 (ENSCPBG00000005398)	ENSCPBG00000005390	ENSCPBG00000005385
painted turtle	MODERN SPECIES	2403	ECSIT (ENSCPBG00000023960)	ENSCPBG00000023959	CNN1 (ENSCPBG00000023957)	ELOF1 (ENSCPBG00000023953)	ACP5 (ENSCPBG00000023952)	NFIX (ENSCPBG00000023946)	GADD45GIP1 (ENSCPBG00000023940)	ENSCPBG00000023933	RAD23A (ENSCPBG00000023930)	ENSCPBG00000023916	FARSA (ENSCPBG00000023915)	ENSCPBG00000023914	SYCE2 (ENSCPBG00000023913)	GCDH (ENSCPBG00000023912)	MAST1 (ENSCPBG00000023911)	ENSCPBG00000023910 ##22	RNASEH2A (ENSCPBG00000023909)	PRDX2 (ENSCPBG00000023908)	JUNB (ENSCPBG00000023907)	HOOK2 (ENSCPBG00000023905)	BEST2 (ENSCPBG00000023904)	GET3 (ENSCPBG00000023903)	TRIR (ENSCPBG00000023902)	ENSCPBG00000023900	TNPO2 (ENSCPBG00000023892)	FBXW9 (ENSCPBG00000023887)	ENSCPBG00000023879	DHPS (ENSCPBG00000023877)	ENSCPBG00000023873	WDR83OS (ENSCPBG00000023872)	MAN2B1 (ENSCPBG00000023871)
Chinese turtle	DUPLICATION
Chinese turtle	MODERN SPECIES	640												POMGNT1 (ENSPSIG00000011729)	TSPAN1 (ENSPSIG00000011664)	PIK3R3 (ENSPSIG00000011656)	MAST2 (ENSPSIG00000011643)	ENSPSIG00000011485 ##22	IPP (ENSPSIG00000011375)	TMEM69 (ENSPSIG00000011364)	GPBP1L1 (ENSPSIG00000011356)	NASP (ENSPSIG00000010948)	AKR1A1 (ENSPSIG00000010528)	PRDX1 (ENSPSIG00000010419)	MMACHC (ENSPSIG00000010390)	ENSPSIG00000010383	TESK2 (ENSPSIG00000010305)	TOE1 (ENSPSIG00000010299)	MUTYH (ENSPSIG00000010238)	ENSPSIG00000010228	ZSWIM5 (ENSPSIG00000010140)	ENSPSIG00000010091	EIF2B3 (ENSPSIG00000009928)
Chinese turtle	MODERN SPECIES	181							NFIX (ENSPSIG00000013902)	ENSPSIG00000013785	RAD23A (ENSPSIG00000013229)	ENSPSIG00000012928	FARSA (ENSPSIG00000012701)	SYCE2 (ENSPSIG00000012696)	GCDH (ENSPSIG00000012491)	MAST1 (ENSPSIG00000012191)	ENSPSIG00000012165	ENSPSIG00000012044 ##22	RNASEH2A (ENSPSIG00000012039)	PRDX2 (ENSPSIG00000012036)	JUNB (ENSPSIG00000000714)	ENSPSIG00000000707	GET3 (ENSPSIG00000012030)	ENSPSIG00000012015	TNPO2 (ENSPSIG00000010215)	FBXW9 (ENSPSIG00000009970)	DHPS (ENSPSIG00000009859)	WDR83 (ENSPSIG00000008218)	WDR83OS (ENSPSIG00000008145)	ENSPSIG00000006881	ENSPSIG00000006121
Lepidosauria	ANCESTRAL SPECIES	11	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000163316.b	ENSGT00940000163316.a.b	ENSGT00940000163316.a.a	ENSGT00940000161237	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b
tuatara	MODERN SPECIES	1725	ENSSPUG00000008905	DMBX1 (ENSSPUG00000008894)	ENSSPUG00000008867	ENSSPUG00000008848	ENSSPUG00000008796	FAAH (ENSSPUG00000008773)	NSUN4 (ENSSPUG00000008598)	ENSSPUG00000008549	LRRC41 (ENSSPUG00000008537)	RAD54L (ENSSPUG00000008501)	LURAP1 (ENSSPUG00000008406)	POMGNT1 (ENSSPUG00000008304)	TSPAN1 (ENSSPUG00000008283)	PIK3R3 (ENSSPUG00000008274)	MAST2 (ENSSPUG00000008056)	ENSSPUG00000007957 ##22	IPP (ENSSPUG00000007872)
Episquamata	ANCESTRAL SPECIES	1	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000163316.b	ENSGT00940000163316.a.b	ENSGT00940000163316.a.a	ENSGT00940000161237	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000012433.b	ENSGT00940000160852	ENSGT00940000164586	ENSGT00940000159121	ENSGT00940000162474	ENSGT00940000162133	ENSGT00510000047486	ENSGT00940000159901	ENSGT00940000159923	ENSGT00390000018302	ENSGT00940000158362	ENSGT00390000003464
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000163316.b	ENSGT00940000163316.a.b	ENSGT00940000163316.a.a	ENSGT00940000161237	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000012433.b	ENSGT00940000160852	ENSGT00940000164586	ENSGT00940000159121	ENSGT00940000162474	ENSGT00940000162133	ENSGT00510000047486	ENSGT00940000159901	ENSGT00940000159923	ENSGT00390000018302	ENSGT00940000158362	ENSGT00390000003464
Elapidae	ANCESTRAL SPECIES	1	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000163316.b	ENSGT00940000163316.a.b	ENSGT00940000163316.a.a	ENSGT00940000161237	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000012433.b	ENSGT00940000160852	ENSGT00940000164586	ENSGT00940000159121	ENSGT00940000162474	ENSGT00940000162133	ENSGT00510000047486	ENSGT00940000159901	ENSGT00940000159923	ENSGT00390000018302	ENSGT00940000158362	ENSGT00390000003464
Indian cobra	MODERN SPECIES	2	ENSNNAG00000009684	DMBX1 (ENSNNAG00000009640)	ENSNNAG00000009543	ENSNNAG00000009445	ENSNNAG00000009411	FAAH (ENSNNAG00000008955)	NSUN4 (ENSNNAG00000008917)	ENSNNAG00000008904	LRRC41 (ENSNNAG00000008886)	RAD54L (ENSNNAG00000008522)	LURAP1 (ENSNNAG00000008492)	POMGNT1 (ENSNNAG00000008355)	TSPAN1 (ENSNNAG00000008310)	PIK3R3 (ENSNNAG00000008262)	MAST2 (ENSNNAG00000005562)	ENSNNAG00000005323 ##22	IPP (ENSNNAG00000005300)	TMEM69 (ENSNNAG00000005287)	GPBP1L1 (ENSNNAG00000005252)	ENSNNAG00000005212	BEST4 (ENSNNAG00000005176)	ENSNNAG00000005162	PLK3 (ENSNNAG00000005132)	DYNLT4 (ENSNNAG00000005122)	BTBD19 (ENSNNAG00000005100)	EIF2B3 (ENSNNAG00000005050)	PTCH2 (ENSNNAG00000002025)	HECTD3 (ENSNNAG00000001256)	UROD (ENSNNAG00000001236)	ZSWIM5 (ENSNNAG00000000938)	MMACHC (ENSNNAG00000000844)
Elapidae_a	ANCESTRAL SPECIES	7	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000163316.b	ENSGT00940000163316.a.b	ENSGT00940000163316.a.a	ENSGT00940000161237	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000012433.b	ENSGT00940000160852	ENSGT00940000164586	ENSGT00940000159121	ENSGT00940000162474	ENSGT00940000162133	ENSGT00510000047486	ENSGT00940000159901	ENSGT00940000159923	ENSGT00390000018302	ENSGT00940000158362	ENSGT00390000003464
Blue-lipped sea krait	DUPLICATION
Blue-lipped sea krait	MODERN SPECIES	7080																ENSLLTG00000004714 ##22
Blue-lipped sea krait	MODERN SPECIES	3685														PWWP2A (ENSLLTG00000007222)	TTC1 (ENSLLTG00000007234)	ENSLLTG00000007259 ##22	RNASEH2A (ENSLLTG00000007281)
Acanthophiinae	ANCESTRAL SPECIES	5	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000163316.b	ENSGT00940000163316.a.b	ENSGT00940000163316.a.a	ENSGT00940000161237	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000012433.b	ENSGT00940000160852	ENSGT00940000164586	ENSGT00940000159121	ENSGT00940000162474	ENSGT00940000162133	ENSGT00510000047486	ENSGT00940000159901	ENSGT00940000159923	ENSGT00390000018302	ENSGT00940000158362	ENSGT00390000003464
Mainland tiger snake	MODERN SPECIES	13	TMEM275 (ENSNSUG00000016165)	DMBX1 (ENSNSUG00000016164)	ENSNSUG00000016163	ENSNSUG00000016162	ENSNSUG00000016161	FAAH (ENSNSUG00000016160)	NSUN4 (ENSNSUG00000016159)	ENSNSUG00000016158	LRRC41 (ENSNSUG00000016149)	RAD54L (ENSNSUG00000016147)	LURAP1 (ENSNSUG00000016145)	POMGNT1 (ENSNSUG00000016096)	TSPAN1 (ENSNSUG00000016088)	PIK3R3 (ENSNSUG00000016086)	MAST2 (ENSNSUG00000015815)	ENSNSUG00000015813 ##22	IPP (ENSNSUG00000015812)	TMEM69 (ENSNSUG00000015811)	GPBP1L1 (ENSNSUG00000015810)	RPS8 (ENSNSUG00000015807)	BEST4 (ENSNSUG00000015806)	ENSNSUG00000015805	PLK3 (ENSNSUG00000015804)	DYNLT4 (ENSNSUG00000015803)	BTBD19 (ENSNSUG00000015802)	EIF2B3 (ENSNSUG00000015781)	PTCH2 (ENSNSUG00000015780)	HECTD3 (ENSNSUG00000015758)	UROD (ENSNSUG00000015757)	ZSWIM5 (ENSNSUG00000015756)	MMACHC (ENSNSUG00000015755)
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	34	ENSPTXG00000001502	DMBX1 (ENSPTXG00000001497)	ENSPTXG00000001485	ENSPTXG00000001479	ENSPTXG00000007125	FAAH (ENSPTXG00000007124)	NSUN4 (ENSPTXG00000007122)	ENSPTXG00000007120	LRRC41 (ENSPTXG00000007114)	RAD54L (ENSPTXG00000007109)	LURAP1 (ENSPTXG00000007107)	POMGNT1 (ENSPTXG00000007106)	TSPAN1 (ENSPTXG00000007105)	PIK3R3 (ENSPTXG00000007104)	MAST2 (ENSPTXG00000001758)	ENSPTXG00000001662 ##22	IPP (ENSPTXG00000001661)	TMEM69 (ENSPTXG00000001660)	ENSPTXG00000001659	RPS8 (ENSPTXG00000001654)	ENSPTXG00000001653	PLK3 (ENSPTXG00000001652)	EIF2B3 (ENSPTXG00000001651)	PTCH2 (ENSPTXG00000001650)	HECTD3 (ENSPTXG00000001646)	UROD (ENSPTXG00000001643)	ZSWIM5 (ENSPTXG00000001640)	MMACHC (ENSPTXG00000001638)	ENSPTXG00000001633	ENSPTXG00000001629	TESK2 (ENSPTXG00000001624)
Eastern brown snake	MODERN SPECIES	6	ENSPTXG00000007980	NUDCD2 (ENSPTXG00000007979)	CCNG1 (ENSPTXG00000007977)	GABRG2 (ENSPTXG00000007952)	GABRA1 (ENSPTXG00000007948)	GABRB2 (ENSPTXG00000007944)	ENSPTXG00000007941	ATP10B (ENSPTXG00000007936)	ENSPTXG00000007926	SLU7 (ENSPTXG00000007924)	C1QTNF2 (ENSPTXG00000007923)	CCNJL (ENSPTXG00000007921)	FABP6 (ENSPTXG00000007917)	PWWP2A (ENSPTXG00000007913)	TTC1 (ENSPTXG00000007912)	ENSPTXG00000007911 ##22	RNASEH2A (ENSPTXG00000007909)	PRDX2 (ENSPTXG00000007908)	JUNB (ENSPTXG00000007907)	HOOK2 (ENSPTXG00000007904)	BEST2 (ENSPTXG00000007902)	GET3 (ENSPTXG00000007901)	TRIR (ENSPTXG00000007900)	ENSPTXG00000007898	TNPO2 (ENSPTXG00000007892)	FBXW9 (ENSPTXG00000007888)	WDR83 (ENSPTXG00000007886)	WDR83OS (ENSPTXG00000007885)	IER2 (ENSPTXG00000007884)	ENSPTXG00000007883	STX10 (ENSPTXG00000007882)
Lizard	DUPLICATION
Lizard	DUPLICATION
Lizard	MODERN SPECIES	3	ENSACAG00000001984	FAAH (ENSACAG00000002040)	NSUN4 (ENSACAG00000043184)	ENSACAG00000002194	LRRC41 (ENSACAG00000002210)	RAD54L (ENSACAG00000002312)	LURAP1 (ENSACAG00000002422)	ENSACAG00000002593	POMGNT1 (ENSACAG00000002424)	TSPAN1 (ENSACAG00000029493)	ENSACAG00000028366	PIK3R3 (ENSACAG00000015856)	ENSACAG00000038001	ENSACAG00000040097	MAST2 (ENSACAG00000015765)	ENSACAG00000015757 ##22	ENSACAG00000034632	IPP (ENSACAG00000015733)	TMEM69 (ENSACAG00000015732)	GPBP1L1 (ENSACAG00000015710)	ENSACAG00000015697	BEST4 (ENSACAG00000015654)	ENSACAG00000037806	PLK3 (ENSACAG00000015556)	BTBD19 (ENSACAG00000025484)	ENSACAG00000040878	ENSACAG00000039368	ENSACAG00000043022	ENSACAG00000015495	ENSACAG00000015383	HECTD3 (ENSACAG00000015321)
Lizard	MODERN SPECIES	590																ENSACAG00000022661 ##22
Lizard	MODERN SPECIES	900					ENSACAG00000036703	ATP10B (ENSACAG00000006180)	ENSACAG00000041795	pttg1 (ENSACAG00000038565)	SLU7 (ENSACAG00000003144)	C1QTNF2 (ENSACAG00000003238)	CCNJL (ENSACAG00000003244)	FABP6 (ENSACAG00000003260)	PWWP2A (ENSACAG00000003282)	ENSACAG00000041562	ENSACAG00000034730	ENSACAG00000013645 ##22	RNASEH2A (ENSACAG00000003338)	PRDX2 (ENSACAG00000003382)	JUNB (ENSACAG00000022758)	HOOK2 (ENSACAG00000003428)	BEST2 (ENSACAG00000003499)	GET3 (ENSACAG00000025550)	TRIR (ENSACAG00000003556)	ENSACAG00000003560	TNPO2 (ENSACAG00000003576)	FBXW9 (ENSACAG00000003732)	WDR83 (ENSACAG00000003772)	WDR83OS (ENSACAG00000003794)	IER2 (ENSACAG00000041275)	STX10 (ENSACAG00000003807)	NACC1 (ENSACAG00000003808)
Laterata	ANCESTRAL SPECIES	3	ENSGT00390000008086	ENSGT00940000155505.a	ENSGT00940000163316.b	ENSGT00940000163316.a.b	ENSGT00940000163316.a.a	ENSGT00940000161237	ENSGT00940000153665.b.a.b	ENSGT00390000003860	ENSGT00390000015908	ENSGT00940000156897	ENSGT00530000063790.a	ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.b	ENSGT00940000155705.b	ENSGT00950000183144.B ##22	ENSGT00940000158629	ENSGT00390000015318	ENSGT00420000029753.b	ENSGT00390000012433.b	ENSGT00940000160852	ENSGT00940000164586	ENSGT00940000159121	ENSGT00940000162474	ENSGT00940000162133	ENSGT00510000047486	ENSGT00940000159901	ENSGT00940000159923	ENSGT00390000018302	ENSGT00940000158362	ENSGT00390000003464
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	14	DMBX1 (ENSPMRG00000008152)	ENSPMRG00000008154	ENSPMRG00000008164	ENSPMRG00000008178	FAAH (ENSPMRG00000008196)	NSUN4 (ENSPMRG00000008211)	ENSPMRG00000008218	LRRC41 (ENSPMRG00000008224)	RAD54L (ENSPMRG00000008267)	LURAP1 (ENSPMRG00000008487)	POMGNT1 (ENSPMRG00000008531)	TSPAN1 (ENSPMRG00000008655)	PIK3R3 (ENSPMRG00000008673)	MAST2 (ENSPMRG00000008824)	ENSPMRG00000009604	ENSPMRG00000009610 ##22	IPP (ENSPMRG00000009620)	TMEM69 (ENSPMRG00000009634)	GPBP1L1 (ENSPMRG00000009638)	RPS8 (ENSPMRG00000009647)	BEST4 (ENSPMRG00000009667)	ENSPMRG00000009673	PLK3 (ENSPMRG00000009686)	DYNLT4 (ENSPMRG00000009700)	BTBD19 (ENSPMRG00000009707)	EIF2B3 (ENSPMRG00000009723)	PTCH2 (ENSPMRG00000009741)	HECTD3 (ENSPMRG00000009767)	ENSPMRG00000009780	UROD (ENSPMRG00000009785)	ZSWIM5 (ENSPMRG00000009809)
Common wall lizard	MODERN SPECIES	10	CCNG1 (ENSPMRG00000011071)	ENSPMRG00000011068	GABRG2 (ENSPMRG00000011060)	GABRA1 (ENSPMRG00000011054)	GABRA6 (ENSPMRG00000011045)	GABRB2 (ENSPMRG00000011033)	ATP10B (ENSPMRG00000010905)	ENSPMRG00000010883	SLU7 (ENSPMRG00000010877)	C1QTNF2 (ENSPMRG00000010872)	CCNJL (ENSPMRG00000010868)	FABP6 (ENSPMRG00000010865)	ENSPMRG00000010862	PWWP2A (ENSPMRG00000010860)	TTC1 (ENSPMRG00000010829)	ENSPMRG00000010809 ##22	RNASEH2A (ENSPMRG00000010800)	PRDX2 (ENSPMRG00000010782)	ENSPMRG00000010777	JUNB (ENSPMRG00000010774)	HOOK2 (ENSPMRG00000010757)	BEST2 (ENSPMRG00000010746)	GET3 (ENSPMRG00000010741)	TRIR (ENSPMRG00000010734)	ENSPMRG00000010732	TNPO2 (ENSPMRG00000010718)	FBXW9 (ENSPMRG00000010713)	WDR83 (ENSPMRG00000010708)	ENSPMRG00000010703	IER2 (ENSPMRG00000010701)	STX10 (ENSPMRG00000010697)
Argentine black and white tegu	DUPLICATION
Argentine black and white tegu	MODERN SPECIES	16	MOB3C (ENSSMRG00000018334)	ENSSMRG00000018336	TMEM275 (ENSSMRG00000018337)	DMBX1 (ENSSMRG00000018338)	ENSSMRG00000018339	ENSSMRG00000018340	NSUN4 (ENSSMRG00000018341)	ENSSMRG00000018342	LRRC41 (ENSSMRG00000018343)	RAD54L (ENSSMRG00000018344)	LURAP1 (ENSSMRG00000018346)	POMGNT1 (ENSSMRG00000018347)	TSPAN1 (ENSSMRG00000018348)	PIK3R3 (ENSSMRG00000018350)	MAST2 (ENSSMRG00000018352)	ENSSMRG00000018353 ##22	IPP (ENSSMRG00000018354)	TMEM69 (ENSSMRG00000018355)	GPBP1L1 (ENSSMRG00000018356)	RPS8 (ENSSMRG00000018357)	BEST4 (ENSSMRG00000018358)	ENSSMRG00000018363	PLK3 (ENSSMRG00000018364)	DYNLT4 (ENSSMRG00000018365)	BTBD19 (ENSSMRG00000018366)	EIF2B3 (ENSSMRG00000018368)	PTCH2 (ENSSMRG00000018370)	HECTD3 (ENSSMRG00000018371)	UROD (ENSSMRG00000018372)	ZSWIM5 (ENSSMRG00000018373)	ENSSMRG00000018374
Argentine black and white tegu	MODERN SPECIES	1	CCNG1 (ENSSMRG00000003603)	ENSSMRG00000003616	GABRG2 (ENSSMRG00000003620)	GABRA1 (ENSSMRG00000003623)	GABRA6 (ENSSMRG00000003628)	GABRB2 (ENSSMRG00000003635)	ENSSMRG00000003642	ATP10B (ENSSMRG00000003645)	ENSSMRG00000004264	SLU7 (ENSSMRG00000004269)	C1QTNF2 (ENSSMRG00000004274)	CCNJL (ENSSMRG00000004294)	FABP6 (ENSSMRG00000004297)	PWWP2A (ENSSMRG00000004300)	TTC1 (ENSSMRG00000004302)	ENSSMRG00000004305 ##22	RNASEH2A (ENSSMRG00000004307)	PRDX2 (ENSSMRG00000004309)	JUNB (ENSSMRG00000004310)	HOOK2 (ENSSMRG00000004311)	BEST2 (ENSSMRG00000004322)	GET3 (ENSSMRG00000004333)	TRIR (ENSSMRG00000004338)	ENSSMRG00000004342	TNPO2 (ENSSMRG00000004344)	FBXW9 (ENSSMRG00000004357)	WDR83 (ENSSMRG00000004361)	WDR83OS (ENSSMRG00000004362)	IER2 (ENSSMRG00000004370)	STX10 (ENSSMRG00000004371)	NACC1 (ENSSMRG00000004373)
Actinopterygii	ANCESTRAL SPECIES	172	ENSGT00940000160389	ENSGT00510000047770.c.a	ENSGT00940000166140	ENSGT00940000157140.b.b	ENSGT00390000005147	ENSGT00470000042444	ENSGT00940000161143	ENSGT01050000244887.A.a.a.a	ENSGT00940000159543	ENSGT00940000159089	ENSGT00940000159801.B	ENSGT00390000005605	ENSGT00950000182923.A	ENSGT00530000063000.a.a.b	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817
Neopterygii	ANCESTRAL SPECIES	86		ENSGT00940000160389	ENSGT00510000047770.c.a	ENSGT00940000166140	ENSGT00940000157140.b.b	ENSGT00470000042444	ENSGT00940000161143	ENSGT00390000005147	ENSGT01050000244887.A.a.a.a	ENSGT00940000159543	ENSGT00390000005584	ENSGT00940000161046	ENSGT00940000156887	ENSGT00530000063000.a.a.b	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195.a.b	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00940000161361	ENSGT00390000003817	ENSGT00390000012267	ENSGT00940000163721	ENSGT00390000012078.a.b	ENSGT00950000182916.a.b.a.a.a.b.a.b	ENSGT00950000185200	ENSGT00390000013719	ENSGT00950000182917.a.b.b	ENSGT00940000164506
Osteoglossocephalai	ANCESTRAL SPECIES	86	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343	ENSGT00940000166140	ENSGT00940000157140.b.b.b	ENSGT00470000042444	ENSGT00940000161143	ENSGT00940000159543	ENSGT00940000165948	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b	ENSGT00940000157700	ENSGT00950000183144.B ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195.a.b
Clupeocephala	ANCESTRAL SPECIES	5	ENSGT01030000234881	ENSGT00390000012436.h	ENSGT00940000165343.c.a	ENSGT00940000166140	ENSGT00940000157140.b.b.b	ENSGT00470000042444	ENSGT00940000161143	ENSGT01050000244887.A.a.a.a.i	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000154277.b.b.b	ENSGT00940000155828	ENSGT00940000161195.a.b	ENSGT00940000161361	ENSGT00390000003817	ENSGT00940000163721	ENSGT00950000182916.a.b.a.a.a.b.a.a	ENSGT00530000063926.b	ENSGT00940000164506.b.a	ENSGT00940000157552.s.a	ENSGT00390000004368	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e
Euteleosteomorpha	ANCESTRAL SPECIES		ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT01030000234881	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000154277.b.b.b	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000177829	ENSGT00940000154990.fb.b
Acanthomorphata	ANCESTRAL SPECIES	25	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT01030000234881	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000177829	ENSGT00940000154990.fb.b
Euacanthomorphacea	ANCESTRAL SPECIES	5	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT01030000234881	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT01040000241154	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000177829
Percomorphaceae	ANCESTRAL SPECIES	3	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT01030000234881	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611
Percomorphaceae_B	ANCESTRAL SPECIES	2	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT01030000234881	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT01040000241154	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000177829
Percomorphaceae_C	ANCESTRAL SPECIES		ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT01030000234881	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT01040000241154	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000177829
Percomorphaceae_D	ANCESTRAL SPECIES	1	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT01030000234881	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000177829	ENSGT00940000154990.fb.b
Anabantaria	ANCESTRAL SPECIES	6	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT01030000234881	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000177829	ENSGT00940000154990.fb.b
Zig-zag eel	MODERN SPECIES	22	ENSMAMG00000028391	EMP1 (ENSMAMG00000009018)	GSG1 (ENSMAMG00000009024)	ENSMAMG00000009035	ENSMAMG00000009043	ENSMAMG00000028475	ENSMAMG00000009094	wbp2nl (ENSMAMG00000009102)	rrp7a (ENSMAMG00000009125)	ENSMAMG00000009151	fam234b (ENSMAMG00000009213)	ENSMAMG00000009228	ENSMAMG00000009256	ENSMAMG00000009380	MAST1 (ENSMAMG00000009392)	rtbdn (ENSMAMG00000009461) ##22	junbb (ENSMAMG00000025546)	hook2 (ENSMAMG00000009671)	ubn2b (ENSMAMG00000009736)	trir (ENSMAMG00000009782)	ENSMAMG00000009789	ENSMAMG00000009813	ENSMAMG00000009822	ENSMAMG00000009898	ENSMAMG00000009908	ENSMAMG00000009916	ENSMAMG00000024601	ENSMAMG00000027988	ENSMAMG00000026146	ENSMAMG00000010390	ENSMAMG00000026048
Anabantoidei	ANCESTRAL SPECIES	7	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT01030000234881	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT01100000263705
Siamese fighting fish	MODERN SPECIES	19	gcat (ENSBSLG00000007653)	mcm5 (ENSBSLG00000007575)	hmox1a (ENSBSLG00000007561)	ankrd54 (ENSBSLG00000007549)	ENSBSLG00000007547	hmgxb4a (ENSBSLG00000007543)	si:dkeyp-69e1.8 (ENSBSLG00000007541)	foxd7 (ENSBSLG00000007540)	s1pr5a (ENSBSLG00000007536)	spc24 (ENSBSLG00000007535)	kri1 (ENSBSLG00000007526)	ldlra (ENSBSLG00000007510)	smarca4a (ENSBSLG00000007418)	ATG4D (ENSBSLG00000007413)	ENSBSLG00000007367	rtbdn (ENSBSLG00000007358) ##22	junbb (ENSBSLG00000007355)	hook2 (ENSBSLG00000006692)	trir (ENSBSLG00000006271)	rpsa (ENSBSLG00000006254)	ENSBSLG00000006253	ENSBSLG00000006252	ENSBSLG00000006249	ENSBSLG00000004589	txn2 (ENSBSLG00000004538)	ENSBSLG00000004536	ENSBSLG00000004533	trappc5 (ENSBSLG00000004508)	pglyrp6 (ENSBSLG00000004477)	WIZ (ENSBSLG00000004466)	ptger1b (ENSBSLG00000004461)
Carangaria	ANCESTRAL SPECIES	4	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT01100000263705
Pleuronectoidei	ANCESTRAL SPECIES	2	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000160152	ENSGT00940000161195.a.a	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT01100000263705
Turbot	MODERN SPECIES	10	gcat (ENSSMAG00000003602)	mcm5 (ENSSMAG00000003553)	foxred2 (ENSSMAG00000003473)	ankrd54 (ENSSMAG00000003542)	ENSSMAG00000034140	hmgxb4a (ENSSMAG00000003433)	si:dkeyp-69e1.8 (ENSSMAG00000003420)	foxd7 (ENSSMAG00000003416)	s1pr5a (ENSSMAG00000003411)	spc24 (ENSSMAG00000025121)	kri1 (ENSSMAG00000003342)	ldlra (ENSSMAG00000003321)	smarca4a (ENSSMAG00000003200)	ENSSMAG00000003181	ENSSMAG00000003147	rtbdn (ENSSMAG00000003131) ##22	ENSSMAG00000003103	ENSSMAG00000003094	ENSSMAG00000023842	ENSSMAG00000002993	ENSSMAG00000002885	txn2 (ENSSMAG00000002868)	ENSSMAG00000002861	ENSSMAG00000002831	ENSSMAG00000002816	ENSSMAG00000002798	ENSSMAG00000002778	pkn1b (ENSSMAG00000002589)	ENSSMAG00000002575	ENSSMAG00000002559	ENSSMAG00000002524
Tongue sole	MODERN SPECIES	8	mcm5 (ENSCSEG00000014503)	gcat (ENSCSEG00000014525)	tom1 (ENSCSEG00000014540)	mfsd6l (ENSCSEG00000014552)	ENSCSEG00000014558	ntn1b (ENSCSEG00000014566)	si:dkeyp-69e1.8 (ENSCSEG00000014574)	foxd7 (ENSCSEG00000014582)	s1pr5a (ENSCSEG00000014590)	spc24 (ENSCSEG00000014595)	kri1 (ENSCSEG00000014632)	ldlra (ENSCSEG00000014678)	smarca4a (ENSCSEG00000014771)	ATG4D (ENSCSEG00000014816)	MAST1 (ENSCSEG00000014975)	rtbdn (ENSCSEG00000014991) ##22	ENSCSEG00000015003	junbb (ENSCSEG00000015048)	trir (ENSCSEG00000015054)	ubn2b (ENSCSEG00000015063)	rpsa (ENSCSEG00000015086)	slc25a38a (ENSCSEG00000015201)	MYH9 (ENSCSEG00000015246)	ENSCSEG00000015385	txn2 (ENSCSEG00000015391)	ENSCSEG00000015397	ENSCSEG00000015409	DDX39A (ENSCSEG00000015474)	ENSCSEG00000015487	tnnt1 (ENSCSEG00000015502)	pih1d1 (ENSCSEG00000015518)
Carangaria_A	ANCESTRAL SPECIES	12	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00940000154990.fb.b	ENSGT00940000168611	ENSGT00950000183036.b.f
Seriola	ANCESTRAL SPECIES	23	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00390000018482	ENSGT00940000161324.h.b	ENSGT00390000018868.A	ENSGT00530000063694.b	ENSGT00390000017489.a	ENSGT00390000018898	ENSGT00940000157340.k.b	ENSGT00390000015973	ENSGT00940000157339	ENSGT00940000166743	ENSGT00390000020164
Yellowtail amberjack	MODERN SPECIES	3214	mcm5 (ENSSLDG00000024344)	hmox1a (ENSSLDG00000024376)	foxred2 (ENSSLDG00000024389)	ankrd54 (ENSSLDG00000024403)	hmgxb4a (ENSSLDG00000024411)	si:dkeyp-69e1.8 (ENSSLDG00000024430)	foxd7 (ENSSLDG00000024433)	s1pr5a (ENSSLDG00000024435)	spc24 (ENSSLDG00000024439)	kri1 (ENSSLDG00000024449)	ldlra (ENSSLDG00000024476)	smarca4a (ENSSLDG00000024486)	ATG4D (ENSSLDG00000024552)	MAST1 (ENSSLDG00000024572)	ENSSLDG00000024651	rtbdn (ENSSLDG00000024661) ##22	junbb (ENSSLDG00000024674)	hook2 (ENSSLDG00000024683)	trir (ENSSLDG00000024724)	ubn2b (ENSSLDG00000024732)	rrp7a (ENSSLDG00000024758)	POLDIP3 (ENSSLDG00000024763)	fam234b (ENSSLDG00000024774)	SMDT1 (ENSSLDG00000024784)	ndufa6 (ENSSLDG00000024789)	triobpb (ENSSLDG00000024817)	nol12 (ENSSLDG00000024826)	srebf2 (ENSSLDG00000024831)	ENSSLDG00000024850	CCDC134 (ENSSLDG00000024853)	ENSSLDG00000024868
Greater amberjack	MODERN SPECIES	225	gcat (ENSSDUG00000017601)	mcm5 (ENSSDUG00000017539)	hmox1a (ENSSDUG00000017522)	foxred2 (ENSSDUG00000017501)	ankrd54 (ENSSDUG00000017492)	hmgxb4a (ENSSDUG00000017480)	si:dkeyp-69e1.8 (ENSSDUG00000017466)	foxd7 (ENSSDUG00000017459)	s1pr5a (ENSSDUG00000017452)	spc24 (ENSSDUG00000017432)	kri1 (ENSSDUG00000017395)	ldlra (ENSSDUG00000017366)	smarca4a (ENSSDUG00000017298)	ATG4D (ENSSDUG00000017265)	MAST1 (ENSSDUG00000017147)	rtbdn (ENSSDUG00000017125) ##22	junbb (ENSSDUG00000017119)	hook2 (ENSSDUG00000017095)	trir (ENSSDUG00000017089)	ubn2b (ENSSDUG00000016985)	rrp7a (ENSSDUG00000016921)	ENSSDUG00000016940	POLDIP3 (ENSSDUG00000016881)	fam234b (ENSSDUG00000016835)	SMDT1 (ENSSDUG00000016826)	ndufa6 (ENSSDUG00000016818)	triobpb (ENSSDUG00000016789)	nol12 (ENSSDUG00000016769)	srebf2 (ENSSDUG00000016742)	ENSSDUG00000016736	CCDC134 (ENSSDUG00000016718)
Barramundi perch	MODERN SPECIES	138	mcm5 (ENSLCAG00010020992)	hmox1a (ENSLCAG00010020980)	foxred2 (ENSLCAG00010020974)	ankrd54 (ENSLCAG00010020969)	hmgxb4a (ENSLCAG00010020965)	si:dkeyp-69e1.8 (ENSLCAG00010020962)	foxd7 (ENSLCAG00010020945)	s1pr5a (ENSLCAG00010020943)	spc24 (ENSLCAG00010020940)	kri1 (ENSLCAG00010020932)	ldlra (ENSLCAG00010020566)	smarca4a (ENSLCAG00010020479)	ENSLCAG00010020430	ATG4D (ENSLCAG00010020427)	MAST1 (ENSLCAG00010020419)	rtbdn (ENSLCAG00010020407) ##22	junbb (ENSLCAG00010020403)	hook2 (ENSLCAG00010020100)	trir (ENSLCAG00010019994)	ubn2b (ENSLCAG00010019976)	rpsa (ENSLCAG00010019953)	slc25a38a (ENSLCAG00010019948)	MYH9 (ENSLCAG00010017682)	txn2 (ENSLCAG00010017386)	ENSLCAG00010017382	DDX39A (ENSLCAG00010017350)	ENSLCAG00010017334	ENSLCAG00010017331	pkn1b (ENSLCAG00010016723)	ENSLCAG00010016553	MCOLN1 (ENSLCAG00010016537)
Eupercaria	ANCESTRAL SPECIES	3	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611
Eupecaria_A	ANCESTRAL SPECIES	5	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611
Ballan wrasse	MODERN SPECIES	1998																rtbdn (ENSLBEG00000013710) ##22
Eupecaria_B	ANCESTRAL SPECIES		ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611
Eupecaria_C	ANCESTRAL SPECIES	17	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	26	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611
European seabass	MODERN SPECIES	21	tom1 (ENSDLAG00005025467)	gcat (ENSDLAG00005025460)	mcm5 (ENSDLAG00005025443)	hmox1a (ENSDLAG00005025440)	foxred2 (ENSDLAG00005025435)	ankrd54 (ENSDLAG00005025423)	si:dkeyp-69e1.8 (ENSDLAG00005025420)	foxd7 (ENSDLAG00005030410)	s1pr5a (ENSDLAG00005034138)	spc24 (ENSDLAG00005025414)	kri1 (ENSDLAG00005025407)	ldlra (ENSDLAG00005025005)	smarca4a (ENSDLAG00005024921)	ENSDLAG00005024911	MAST1 (ENSDLAG00005024754)	rtbdn (ENSDLAG00005029809) ##22	junbb (ENSDLAG00005024718)	hook2 (ENSDLAG00005024232)	trir (ENSDLAG00005030948)	ubn2b (ENSDLAG00005024137)	ENSDLAG00005033984	ENSDLAG00005022268	ENSDLAG00005022198	ENSDLAG00005022196	ENSDLAG00005022175	ENSDLAG00005022168	ENSDLAG00005022163	ENSDLAG00005029706	pkn1b (ENSDLAG00005018963)	ENSDLAG00005018854	ENSDLAG00005018028
Large yellow croaker	MODERN SPECIES	483	SYN3 (ENSLCRG00005009004)	TIMP3 (ENSLCRG00005009912)	si:ch73-252i11.1 (ENSLCRG00005009918)	ENSLCRG00005009923	TAFA2 (ENSLCRG00005009926)	zgc:165507 (ENSLCRG00005009929)	lrig3 (ENSLCRG00005009932)	atp23 (ENSLCRG00005010181)	rpap3 (ENSLCRG00005010185)	ENSLCRG00005010189	mapk12b (ENSLCRG00005010201)	mapk11 (ENSLCRG00005010317)	smarca4a (ENSLCRG00005010550)	ATG4D (ENSLCRG00005010693)	MAST1 (ENSLCRG00005010704)	rtbdn (ENSLCRG00005012410) ##22	junbb (ENSLCRG00005012411)	hook2 (ENSLCRG00005012442)	rpsa (ENSLCRG00005014977)	trir (ENSLCRG00005014979)	ubn2b (ENSLCRG00005014980)	slc25a38a (ENSLCRG00005014981)	MYH9 (ENSLCRG00005015007)	txn2 (ENSLCRG00005015609)	ENSLCRG00005015610	ENSLCRG00005015611	DDX39A (ENSLCRG00005015615)	ENSLCRG00005015638	ENSLCRG00005015640	ENSLCRG00005002709	pkn1b (ENSLCRG00005002886)
Gilthead seabream	MODERN SPECIES	15	gcat (ENSSAUG00010025862)	mcm5 (ENSSAUG00010025861)	hmox1a (ENSSAUG00010025859)	foxred2 (ENSSAUG00010025858)	ankrd54 (ENSSAUG00010025857)	hmgxb4a (ENSSAUG00010025855)	si:dkeyp-69e1.8 (ENSSAUG00010025854)	foxd7 (ENSSAUG00010025853)	s1pr5a (ENSSAUG00010025851)	spc24 (ENSSAUG00010025850)	kri1 (ENSSAUG00010025845)	ldlra (ENSSAUG00010025481)	smarca4a (ENSSAUG00010025438)	ATG4D (ENSSAUG00010025435)	MAST1 (ENSSAUG00010025250)	rtbdn (ENSSAUG00010025236) ##22	junbb (ENSSAUG00010025234)	hook2 (ENSSAUG00010025205)	trir (ENSSAUG00010025196)	ubn2b (ENSSAUG00010025195)	rpsa (ENSSAUG00010025190)	slc25a38a (ENSSAUG00010025186)	MYH9 (ENSSAUG00010024631)	txn2 (ENSSAUG00010024601)	ENSSAUG00010024600	DDX39A (ENSSAUG00010024594)	ENSSAUG00010024592	ENSSAUG00010024591	ENSSAUG00010024589	pkn1b (ENSSAUG00010023829)	ENSSAUG00010023811
Perciformes	ANCESTRAL SPECIES	1	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611
Cottioidei	ANCESTRAL SPECIES	1	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00940000166981	ENSGT00940000160609.f	ENSGT00510000048192	ENSGT01060000248595.b.a.b.b.a.a	ENSGT00940000164511.C	ENSGT00950000182818.A	ENSGT00940000162682.B.b	ENSGT00940000155510	ENSGT00940000157917.b	ENSGT00530000064085.d	ENSGT00390000008812.b.b.b	ENSGT00940000164506.b.b	ENSGT00940000160257
Lumpfish	MODERN SPECIES	23	gcat (ENSCLMG00005016299)	mcm5 (ENSCLMG00005016272)	hmox1a (ENSCLMG00005016269)	foxred2 (ENSCLMG00005016267)	ankrd54 (ENSCLMG00005016265)	hmgxb4a (ENSCLMG00005016263)	si:dkeyp-69e1.8 (ENSCLMG00005016262)	foxd7 (ENSCLMG00005016261)	s1pr5a (ENSCLMG00005016260)	spc24 (ENSCLMG00005016259)	kri1 (ENSCLMG00005016257)	ldlra (ENSCLMG00005015217)	smarca4a (ENSCLMG00005015175)	ATG4D (ENSCLMG00005015166)	MAST1 (ENSCLMG00005014982)	rtbdn (ENSCLMG00005014980) ##22	junbb (ENSCLMG00005014979)	hook2 (ENSCLMG00005010761)	syt5a (ENSCLMG00005010737)	tnnt1 (ENSCLMG00005010732)	pih1d1 (ENSCLMG00005010731)	ENSCLMG00005004872	ENSCLMG00005004778	prl (ENSCLMG00005004773)	ENSCLMG00005004765	thraa (ENSCLMG00005004517)	NSF (ENSCLMG00005004256)	CDK5R1 (ENSCLMG00005004238)	tspan35 (ENSCLMG00005021271)	ZNF653 (ENSCLMG00005021269)	ENSCLMG00005021268
Stickleback	MODERN SPECIES	10	zgc:171844 (ENSGACG00000006843)	tom1 (ENSGACG00000006786)	mcm5 (ENSGACG00000006776)	hmox1a (ENSGACG00000006771)	foxred2 (ENSGACG00000006763)	ankrd54 (ENSGACG00000006757)	hmgxb4a (ENSGACG00000006744)	si:dkeyp-69e1.8 (ENSGACG00000006740)	s1pr5a (ENSGACG00000006737)	spc24 (ENSGACG00000006733)	kri1 (ENSGACG00000006712)	ldlra (ENSGACG00000006705)	smarca4a (ENSGACG00000006691)	ENSGACG00000006688	MAST1 (ENSGACG00000006669)	rtbdn (ENSGACG00000006658) ##22	junbb (ENSGACG00000006654)	hook2 (ENSGACG00000006640)	syt5a (ENSGACG00000006630)	tnnt1 (ENSGACG00000006626)	pih1d1 (ENSGACG00000006615)	ENSGACG00000006606	ENSGACG00000006598	prl (ENSGACG00000006561)	dusp3b (ENSGACG00000006555)	ENSGACG00000006554	thraa (ENSGACG00000006540)	nsfa (ENSGACG00000006514)	CDK5R1 (ENSGACG00000006504)	tspan35 (ENSGACG00000006494)	ZNF653 (ENSGACG00000006483)
Perciformes_a	ANCESTRAL SPECIES	1	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00940000155858.e	ENSGT00390000012267	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611
Pike perch	MODERN SPECIES	38	gcat (ENSSLUG00000005665)	mcm5 (ENSSLUG00000005621)	hmox1a (ENSSLUG00000005599)	foxred2 (ENSSLUG00000005588)	ankrd54 (ENSSLUG00000005577)	hmgxb4a (ENSSLUG00000005569)	si:dkeyp-69e1.8 (ENSSLUG00000005562)	foxd7 (ENSSLUG00000005557)	s1pr5a (ENSSLUG00000005546)	spc24 (ENSSLUG00000005537)	kri1 (ENSSLUG00000005522)	ldlra (ENSSLUG00000018042)	smarca4a (ENSSLUG00000017847)	ATG4D (ENSSLUG00000017825)	MAST1 (ENSSLUG00000017811)	rtbdn (ENSSLUG00000017798) ##22	junbb (ENSSLUG00000017793)	hook2 (ENSSLUG00000016658)
Channel bull blenny	MODERN SPECIES	22	gcat (ENSCGOG00000011272)	mcm5 (ENSCGOG00000011316)	hmox1a (ENSCGOG00000011632)	foxred2 (ENSCGOG00000011637)	ankrd54 (ENSCGOG00000011675)	hmgxb4a (ENSCGOG00000011687)	si:dkeyp-69e1.8 (ENSCGOG00000011695)	foxd7 (ENSCGOG00000011699)	s1pr5a (ENSCGOG00000011705)	spc24 (ENSCGOG00000011708)	kri1 (ENSCGOG00000011712)	ldlra (ENSCGOG00000011766)	smarca4a (ENSCGOG00000012016)	ATG4D (ENSCGOG00000016428)	MAST1 (ENSCGOG00000016453)	rtbdn (ENSCGOG00000017728) ##22	junbb (ENSCGOG00000017729)	hook2 (ENSCGOG00000017755)	ubn2b (ENSCGOG00000018563)	trir (ENSCGOG00000018567)	rpsa (ENSCGOG00000018572)	slc25a38a (ENSCGOG00000018575)	MYH9 (ENSCGOG00000018703)	txn2 (ENSCGOG00000023533)	ENSCGOG00000023535	DDX39A (ENSCGOG00000023561)	ENSCGOG00000023737	ENSCGOG00000023738	ENSCGOG00000023739	pkn1b (ENSCGOG00000023819)	ENSCGOG00000024170
Ovalentaria	ANCESTRAL SPECIES	1	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT01040000241154	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b
Atherinomorphae	ANCESTRAL SPECIES	25	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000177737	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT01040000241154	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b
Cyprinodontiformes	ANCESTRAL SPECIES	3	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000177737	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT01040000241154	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b
Aplocheiloidei	ANCESTRAL SPECIES	30	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611
Mangrove rivulus	MODERN SPECIES	37	mcm5 (ENSKMAG00000012432)	hmox1a (ENSKMAG00000012409)	foxred2 (ENSKMAG00000012353)	ankrd54 (ENSKMAG00000012297)	hmgxb4a (ENSKMAG00000012268)	si:dkeyp-69e1.8 (ENSKMAG00000012252)	foxd7 (ENSKMAG00000012240)	s1pr5a (ENSKMAG00000012231)	spc24 (ENSKMAG00000012212)	kri1 (ENSKMAG00000012111)	ldlra (ENSKMAG00000012041)	smarca4a (ENSKMAG00000011931)	ATG4D (ENSKMAG00000011884)	MAST1 (ENSKMAG00000011861)	ENSKMAG00000011834	rtbdn (ENSKMAG00000011820) ##22	junbb (ENSKMAG00000011813)	hook2 (ENSKMAG00000011755)	ENSKMAG00000011717	trir (ENSKMAG00000011701)	ubn2b (ENSKMAG00000011657)	rpsa (ENSKMAG00000011591)	slc25a38a (ENSKMAG00000011567)	MYH9 (ENSKMAG00000011387)	txn2 (ENSKMAG00000011298)	ENSKMAG00000011264	DDX39A (ENSKMAG00000011231)	ENSKMAG00000011205	ENSKMAG00000011189	ENSKMAG00000011177	pkn1b (ENSKMAG00000011042)
Turquoise killifish	MODERN SPECIES	1612	foxred2 (ENSNFUG00015017313)	ankrd54 (ENSNFUG00015017321)	HMGXB4 (ENSNFUG00015017370)	ENSNFUG00015017401	foxd7 (ENSNFUG00015017403)	S1PR5A (ENSNFUG00015017411)	SPC24 (ENSNFUG00015017416)	KRI1 (ENSNFUG00015017426)	LDLR (ENSNFUG00015017463)	ENSNFUG00015017623	ENSNFUG00015017627	smarca4a (ENSNFUG00015017646)	ATG4D (ENSNFUG00015017721)	MAST1 (ENSNFUG00015000406)	ENSNFUG00015000831	rtbdn (ENSNFUG00015000833) ##22	hook2 (ENSNFUG00015000942)	C3H19ORF43 (ENSNFUG00015001354)	UBN2 (ENSNFUG00015001361)	RPSA (ENSNFUG00015001374)	slc25a38a (ENSNFUG00015001388)	MYH9 (ENSNFUG00015001458)	ENSNFUG00015001716	TXN2 (ENSNFUG00015001719)	ENSNFUG00015001721	DDX39A (ENSNFUG00015001735)	Nfu_g_1_019756 (ENSNFUG00015001794)	ENSNFUG00015001798	ENG (ENSNFUG00015001805)	ENSNFUG00015002027	ENSNFUG00015002031
Cyprinodontoidei	ANCESTRAL SPECIES	22	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000177737	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT01040000241154	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b
Poeciliinae	ANCESTRAL SPECIES	1	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000177737	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT01040000241154	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b
Poecilia	ANCESTRAL SPECIES	18	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000177737	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT01040000241154	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b
NAME_6	ANCESTRAL SPECIES	40	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000177737	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT01040000241154	ENSGT00940000178069
Sailfin molly	MODERN SPECIES	679										ENSPLAG00000014454	ldlra (ENSPLAG00000014424)	ENSPLAG00000014304	smarca4a (ENSPLAG00000014294)	ATG4D (ENSPLAG00000014163)	MAST1 (ENSPLAG00000014153)	rtbdn (ENSPLAG00000014045) ##22	hook2 (ENSPLAG00000013997)	trir (ENSPLAG00000013962)	ubn2b (ENSPLAG00000013950)	rpsa (ENSPLAG00000013936)	SLC25A38 (ENSPLAG00000013902)
Amazon molly	MODERN SPECIES	364	gcat (ENSPFOG00000006148)	mcm5 (ENSPFOG00000006454)	hmox1a (ENSPFOG00000006716)	foxred2 (ENSPFOG00000006801)	ankrd54 (ENSPFOG00000006969)	hmgxb4a (ENSPFOG00000007097)	si:dkeyp-69e1.8 (ENSPFOG00000007214)	foxd7 (ENSPFOG00000020947)	s1pr5a (ENSPFOG00000020948)	spc24 (ENSPFOG00000007227)	kri1 (ENSPFOG00000007297)	ldlra (ENSPFOG00000007522)	smarca4a (ENSPFOG00000007892)	ATG4D (ENSPFOG00000008224)	ENSPFOG00000008245	rtbdn (ENSPFOG00000008571) ##22	junbb (ENSPFOG00000008616)
Guppy	MODERN SPECIES	460	gcat (ENSPREG00000015026)	ENSPREG00000015020	hmox1a (ENSPREG00000015010)	foxred2 (ENSPREG00000014993)	ankrd54 (ENSPREG00000014877)	hmgxb4a (ENSPREG00000014834)	foxd7 (ENSPREG00000014826)	s1pr5a (ENSPREG00000014811)	spc24 (ENSPREG00000014799)	kri1 (ENSPREG00000014731)	ldlra (ENSPREG00000014707)	smarca4a (ENSPREG00000014608)	ATG4D (ENSPREG00000014549)	MAST1 (ENSPREG00000014461)	junbb (ENSPREG00000014425)	rtbdn (ENSPREG00000014383) ##22	hook2 (ENSPREG00000014349)	trir (ENSPREG00000014314)	ubn2b (ENSPREG00000014253)	ENSPREG00000014229	rpsa (ENSPREG00000014208)	slc25a38a (ENSPREG00000014185)	MYH9 (ENSPREG00000014041)	txn2 (ENSPREG00000014016)	ENSPREG00000014003	DDX39A (ENSPREG00000013989)	ENSPREG00000013976	ENSPREG00000013967	ENSPREG00000013960	pkn1b (ENSPREG00000013849)	ENSPREG00000013823
Platyfish	MODERN SPECIES	7	gcat (ENSXMAG00000004589)	mcm5 (ENSXMAG00000004527)	hmox1a (ENSXMAG00000021191)	foxred2 (ENSXMAG00000004517)	ankrd54 (ENSXMAG00000004508)	hmgxb4a (ENSXMAG00000004489)	si:dkeyp-69e1.8 (ENSXMAG00000004487)	foxd7 (ENSXMAG00000022105)	s1pr5a (ENSXMAG00000019997)	spc24 (ENSXMAG00000004479)	kri1 (ENSXMAG00000004461)	ldlra (ENSXMAG00000006284)	smarca4a (ENSXMAG00000006321)	ATG4D (ENSXMAG00000009160)	MAST1 (ENSXMAG00000009142)	rtbdn (ENSXMAG00000021867) ##22	hook2 (ENSXMAG00000009113)	trir (ENSXMAG00000009111)	ubn2b (ENSXMAG00000009106)	rpsa (ENSXMAG00000009095)	slc25a38a (ENSXMAG00000009093)	MYH9 (ENSXMAG00000008955)	txn2 (ENSXMAG00000021471)	ENSXMAG00000008657	DDX39A (ENSXMAG00000008939)	ENSXMAG00000021166	ENSXMAG00000028641	ENSXMAG00000008924	pkn1b (ENSXMAG00000008895)	ENSXMAG00000025108	ENSXMAG00000022190
NAME_4	ANCESTRAL SPECIES	77	ENSGT00940000156865.b	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT01040000240732	ENSGT00940000178069	ENSGT00940000177829	ENSGT00940000154990.fb.b
Sheepshead minnow	MODERN SPECIES	302												smarca4a (ENSCVAG00000006979)	ATG4D (ENSCVAG00000006993)	MAST1 (ENSCVAG00000000193)	ENSCVAG00000007061	rtbdn (ENSCVAG00000000197) ##22	junbb (ENSCVAG00000007096)	hook2 (ENSCVAG00000000198)	trir (ENSCVAG00000007128)	ubn2b (ENSCVAG00000007272)	rpsa (ENSCVAG00000007308)	slc25a38a (ENSCVAG00000007346)	MYH9 (ENSCVAG00000007422)	txn2 (ENSCVAG00000007438)	ENSCVAG00000007450	DDX39A (ENSCVAG00000007477)	ENSCVAG00000007489	ENSCVAG00000007494	ENSCVAG00000007502	ENSCVAG00000007507	ENSCVAG00000007521
Mummichog	MODERN SPECIES	2245	gcat (ENSFHEG00000010474)	mcm5 (ENSFHEG00000010419)	hmox1a (ENSFHEG00000010353)	foxred2 (ENSFHEG00000010341)	ankrd54 (ENSFHEG00000010317)	hmgxb4a (ENSFHEG00000010296)	si:dkeyp-69e1.8 (ENSFHEG00000010271)	foxd7 (ENSFHEG00000010262)	spc24 (ENSFHEG00000010254)	s1pr5a (ENSFHEG00000010242)	kri1 (ENSFHEG00000010230)	ldlra (ENSFHEG00000010208)	smarca4a (ENSFHEG00000010182)	ATG4D (ENSFHEG00000010060)	MAST1 (ENSFHEG00000010045)	rtbdn (ENSFHEG00000009971) ##22	junbb (ENSFHEG00000009954)	hook2 (ENSFHEG00000009928)	trir (ENSFHEG00000009862)	ubn2b (ENSFHEG00000009890)	rpsa (ENSFHEG00000009847)	slc25a38a (ENSFHEG00000009834)	MYH9 (ENSFHEG00000009825)	txn2 (ENSFHEG00000009742)	ENSFHEG00000009726	DDX39A (ENSFHEG00000009716)	ENSFHEG00000009687	ENSFHEG00000009677	ENSFHEG00000009658	pkn1b (ENSFHEG00000009637)	ENSFHEG00000009563
Oryzias	ANCESTRAL SPECIES		ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000177737	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611
Oryzias_a	ANCESTRAL SPECIES	20	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605.i.a	ENSGT00940000154819.a.b.c.a	ENSGT00390000005605.i.b	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00940000154912.u.b	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b	ENSGT00950000183099	ENSGT00940000155858.e	ENSGT00390000012267	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611
Chinese medaka	MODERN SPECIES	400															MAST1 (ENSOSIG00000005001)	rtbdn (ENSOSIG00000005872) ##22	junbb (ENSOSIG00000005874)	hook2 (ENSOSIG00000005906)	ENSOSIG00000008185	DDX39A (ENSOSIG00000008187)	ENSOSIG00000008193	txn2 (ENSOSIG00000008194)	MYH9 (ENSOSIG00000008234)	slc25a38a (ENSOSIG00000014419)	rpsa (ENSOSIG00000014424)	ubn2b (ENSOSIG00000014428)	trir (ENSOSIG00000014430)	ENSOSIG00000014431	pkn1b (ENSOSIG00000014447)	ENSOSIG00000016544	MCOLN1 (ENSOSIG00000016548)
Japanese Medaka HdrR	MODERN SPECIES	22	ENSORLG00000019647	ENSORLG00000021901	ENSORLG00000028274	ENSORLG00000015398	ENSORLG00000023163	ENSORLG00000029111	ENSORLG00000025742	ENSORLG00000022846	ENSORLG00000023944	ENSORLG00000025256	smarca4a (ENSORLG00000015452)	ENSORLG00000022176	ENSORLG00000015476	ENSORLG00000015500	MAST1 (ENSORLG00000015521)	rtbdn (ENSORLG00000015528) ##22	ENSORLG00000024867	junbb (ENSORLG00000021995)	hook2 (ENSORLG00000015585)	DDX39A (ENSORLG00000010565)	ENSORLG00000026553	txn2 (ENSORLG00000015600)	MYH9 (ENSORLG00000016200)	slc25a38a (ENSORLG00000016238)	rpsa (ENSORLG00000016251)	ubn2b (ENSORLG00000016256)	trir (ENSORLG00000016259)	ENSORLG00000016274	ENSORLG00000026263	ENSORLG00000016288	pkn1b (ENSORLG00000016312)
Oryzias_b	ANCESTRAL SPECIES	42	ENSGT00940000155083.a.c	ENSGT00940000157534.a.b	ENSGT00950000182961.a.b.b	ENSGT00390000013260.A.b.a	ENSGT00390000003753	ENSGT00940000160728.j	ENSGT01000000214705	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000177737	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000177182.b
Indian medaka	MODERN SPECIES	9	ENSOMEG00000008597	ntn1b (ENSOMEG00000001010)	ENSOMEG00000008712	mfsd6l (ENSOMEG00000008731)	zgc:171844 (ENSOMEG00000008764)	tom1 (ENSOMEG00000008938)	gcat (ENSOMEG00000008986)	mcm5 (ENSOMEG00000009046)	hmox1a (ENSOMEG00000009077)	foxred2 (ENSOMEG00000009123)	ankrd54 (ENSOMEG00000009146)	hmgxb4a (ENSOMEG00000009171)	si:dkeyp-69e1.8 (ENSOMEG00000009192)	foxd7 (ENSOMEG00000009211)	MAST1 (ENSOMEG00000009249)	rtbdn (ENSOMEG00000009277) ##22	junbb (ENSOMEG00000009286)	hook2 (ENSOMEG00000009418)	trir (ENSOMEG00000009480)	ubn2b (ENSOMEG00000009511)	rpsa (ENSOMEG00000009576)	slc25a38a (ENSOMEG00000009614)	MYH9 (ENSOMEG00000009713)	txn2 (ENSOMEG00000009745)	ENSOMEG00000009760	DDX39A (ENSOMEG00000009789)	ENSOMEG00000009801	ENSOMEG00000009823	pkn1b (ENSOMEG00000009934)	ENSOMEG00000009972	ENSOMEG00000009981
Javanese ricefish	MODERN SPECIES	22	wbp11 (ENSOJAG00000002768)	ENSOJAG00000002748	ENSOJAG00000002737	GPRC5D (ENSOJAG00000002725)	ENSOJAG00000002708	ENSOJAG00000002697	PLEKHF1 (ENSOJAG00000002687)	ENSOJAG00000002684	s1pr5a (ENSOJAG00000002679)	spc24 (ENSOJAG00000002675)	ENSOJAG00000002621	GADD45GIP1 (ENSOJAG00000002181)	ENSOJAG00000002150	ENSOJAG00000002140	MAST1 (ENSOJAG00000001680)	rtbdn (ENSOJAG00000001580) ##22	junbb (ENSOJAG00000001566)	trir (ENSOJAG00000001541)	ubn2b (ENSOJAG00000001517)	RPSA (ENSOJAG00000001492)	slc25a38a (ENSOJAG00000001481)	txn2 (ENSOJAG00000000925)	ENSOJAG00000000920	DDX39A (ENSOJAG00000000913)	ENSOJAG00000000903	ENSOJAG00000000899	ENSOJAG00000000893	pkn1b (ENSOJAG00000000819)	ENSOJAG00000000770	MCOLN1 (ENSOJAG00000000741)	trappc5 (ENSOJAG00000000680)
Ovalentaria_B	ANCESTRAL SPECIES		ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT01100000263705
Pomacentridae	ANCESTRAL SPECIES	31	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00940000178069	ENSGT00530000063861.a	ENSGT00940000154990.fb.b
Pomacentridae_A	ANCESTRAL SPECIES	21	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605.k	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a.c	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00940000178069	ENSGT00530000063861.a	ENSGT00940000154990.fb.b
Amphiprion	ANCESTRAL SPECIES	25	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605.k	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a.c	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00940000178069	ENSGT00530000063861.a	ENSGT00940000154990.fb.b
Clown anemonefish	MODERN SPECIES	1089																rtbdn (ENSAOCG00000006677) ##22	junbb (ENSAOCG00000006682)	hook2 (ENSAOCG00000007064)	trir (ENSAOCG00000007110)	ubn2b (ENSAOCG00000007139)	rpsa (ENSAOCG00000007195)	slc25a38a (ENSAOCG00000007235)	MYH9 (ENSAOCG00000007343)	txn2 (ENSAOCG00000007365)	ENSAOCG00000000394	DDX39A (ENSAOCG00000007403)	ENSAOCG00000007410
Orange clownfish	MODERN SPECIES	5	hmox1a (ENSAPEG00000015298)	foxred2 (ENSAPEG00000015316)	ankrd54 (ENSAPEG00000015351)	hmgxb4a (ENSAPEG00000015362)	si:dkeyp-69e1.8 (ENSAPEG00000015370)	foxd7 (ENSAPEG00000015388)	s1pr5a (ENSAPEG00000015400)	spc24 (ENSAPEG00000015408)	kri1 (ENSAPEG00000015417)	ldlra (ENSAPEG00000015445)	ENSAPEG00000015536	smarca4a (ENSAPEG00000015559)	ENSAPEG00000015638	ATG4D (ENSAPEG00000015658)	MAST1 (ENSAPEG00000015668)	rtbdn (ENSAPEG00000015759) ##22	ENSAPEG00000015779	hook2 (ENSAPEG00000015844)	trir (ENSAPEG00000016221)	ubn2b (ENSAPEG00000016235)	rpsa (ENSAPEG00000016294)	slc25a38a (ENSAPEG00000016352)	MYH9 (ENSAPEG00000016375)	txn2 (ENSAPEG00000016586)	ENSAPEG00000016651	DDX39A (ENSAPEG00000017193)	ENSAPEG00000017262	ENSAPEG00000017435	pkn1b (ENSAPEG00000017466)	ENSAPEG00000017539	ENSAPEG00000017556
Spiny chromis	MODERN SPECIES	89	hmox1a (ENSAPOG00000003093)	foxred2 (ENSAPOG00000003223)	ankrd54 (ENSAPOG00000003240)	hmgxb4a (ENSAPOG00000003261)	si:dkeyp-69e1.8 (ENSAPOG00000003274)	foxd7 (ENSAPOG00000003284)	ENSAPOG00000003312	s1pr5a (ENSAPOG00000003320)	spc24 (ENSAPOG00000003328)	kri1 (ENSAPOG00000003361)	ldlra (ENSAPOG00000003428)	smarca4a (ENSAPOG00000003509)	ENSAPOG00000003542	ATG4D (ENSAPOG00000003552)	ENSAPOG00000003617	rtbdn (ENSAPOG00000003640) ##22	ENSAPOG00000003699
Bicolor damselfish	MODERN SPECIES	1032					si:dkeyp-69e1.8 (ENSSPAG00000003968)	foxd7 (ENSSPAG00000003978)	s1pr5a (ENSSPAG00000003987)	spc24 (ENSSPAG00000003995)	kri1 (ENSSPAG00000004023)	ldlra (ENSSPAG00000004135)	smarca4a (ENSSPAG00000004248)	ENSSPAG00000004418	ATG4D (ENSSPAG00000004473)	MAST1 (ENSSPAG00000004488)	ENSSPAG00000004515	rtbdn (ENSSPAG00000004563) ##22	hook2 (ENSSPAG00000004624)
Cichlidae	ANCESTRAL SPECIES	19	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611
Pseudocrenilabrinae	ANCESTRAL SPECIES	1	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00940000163467.a.b.b.b	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT01100000263705
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	27	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00940000163467.a.b.b.b	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT01100000263705
Haplochromini	ANCESTRAL SPECIES	32	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00940000163467.a.b.b.b	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611
Burton s mouthbrooder	MODERN SPECIES	350	hmox1a (ENSHBUG00000021422)	ENSHBUG00000021412	foxred2 (ENSHBUG00000021404)	ankrd54 (ENSHBUG00000021341)	hmgxb4a (ENSHBUG00000021327)	si:dkeyp-69e1.8 (ENSHBUG00000021253)	foxd7 (ENSHBUG00000021244)	s1pr5a (ENSHBUG00000021232)	spc24 (ENSHBUG00000021224)	kri1 (ENSHBUG00000021212)	ldlra (ENSHBUG00000021197)	smarca4a (ENSHBUG00000021172)	ATG4D (ENSHBUG00000020894)	MAST1 (ENSHBUG00000020881)	ENSHBUG00000020862	rtbdn (ENSHBUG00000020722) ##22	junbb (ENSHBUG00000020693)	hook2 (ENSHBUG00000020665)	ubn2b (ENSHBUG00000020646)	trir (ENSHBUG00000000633)	rpsa (ENSHBUG00000020630)	slc25a38a (ENSHBUG00000020594)	MYH9 (ENSHBUG00000020558)	txn2 (ENSHBUG00000020290)	ENSHBUG00000020272	DDX39A (ENSHBUG00000020257)	ENSHBUG00000000615	ENSHBUG00000020215	ENSHBUG00000020204	pkn1b (ENSHBUG00000000612)	ENSHBUG00000020107
Haplochromini_A	ANCESTRAL SPECIES	34	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00940000163467.a.b.b.b	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT01100000263705
P. nyererei	MODERN SPECIES	376	hmox1a (ENSPNYG00000000397)	ENSPNYG00000000401	foxred2 (ENSPNYG00000000407)	ankrd54 (ENSPNYG00000000428)	hmgxb4a (ENSPNYG00000000445)	si:dkeyp-69e1.8 (ENSPNYG00000000483)	foxd7 (ENSPNYG00000000490)	s1pr5a (ENSPNYG00000000501)	spc24 (ENSPNYG00000000511)	kri1 (ENSPNYG00000000553)	ldlra (ENSPNYG00000000697)	smarca4a (ENSPNYG00000000717)	ATG4D (ENSPNYG00000000837)	MAST1 (ENSPNYG00000000851)	ENSPNYG00000000905	rtbdn (ENSPNYG00000000986) ##22	junbb (ENSPNYG00000001015)	hook2 (ENSPNYG00000001067)	trir (ENSPNYG00000001295)	ubn2b (ENSPNYG00000001273)	rpsa (ENSPNYG00000001305)	slc25a38a (ENSPNYG00000001346)	MYH9 (ENSPNYG00000001361)	txn2 (ENSPNYG00000001465)	ENSPNYG00000001485	DDX39A (ENSPNYG00000001498)	ENSPNYG00000001563	ENSPNYG00000001775	pkn1b (ENSPNYG00000001809)	ENSPNYG00000001849	MCOLN1 (ENSPNYG00000001876)
Haplochromini_B	ANCESTRAL SPECIES	31	ENSGT01050000244824.G	ENSGT00390000017673.b.l	ENSGT00940000163467.a.b.b.b	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183099	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000177182
Eastern happy	MODERN SPECIES	16	hmox1a (ENSACLG00000018952)	ENSACLG00000018971	foxred2 (ENSACLG00000018978)	ankrd54 (ENSACLG00000019008)	hmgxb4a (ENSACLG00000019023)	si:dkeyp-69e1.8 (ENSACLG00000019084)	foxd7 (ENSACLG00000019118)	s1pr5a (ENSACLG00000000124)	spc24 (ENSACLG00000000132)	kri1 (ENSACLG00000000135)	ldlra (ENSACLG00000000151)	smarca4a (ENSACLG00000000163)	ATG4D (ENSACLG00000000346)	MAST1 (ENSACLG00000000372)	ENSACLG00000000427	rtbdn (ENSACLG00000000460) ##22	junbb (ENSACLG00000000469)	ENSACLG00000000499	hook2 (ENSACLG00000000514)	trir (ENSACLG00000000917)	ubn2b (ENSACLG00000000931)	rpsa (ENSACLG00000000951)	slc25a38a (ENSACLG00000000983)	MYH9 (ENSACLG00000001015)	txn2 (ENSACLG00000001180)	ENSACLG00000001199	DDX39A (ENSACLG00000001214)	ENSACLG00000001247	ENSACLG00000001258	ENSACLG00000001293	pkn1b (ENSACLG00000001314)
Zebra mbuna	MODERN SPECIES	1107	hmox1a (ENSMZEG00005004189)	ENSMZEG00005004130	foxred2 (ENSMZEG00005004108)	ankrd54 (ENSMZEG00005004094)	hmgxb4a (ENSMZEG00005004079)	si:dkeyp-69e1.8 (ENSMZEG00005004070)	foxd7 (ENSMZEG00005004053)	s1pr5a (ENSMZEG00005004045)	spc24 (ENSMZEG00005004038)	kri1 (ENSMZEG00005004013)	ldlra (ENSMZEG00005003998)	smarca4a (ENSMZEG00005003889)	ATG4D (ENSMZEG00005003809)	MAST1 (ENSMZEG00005003727)	ENSMZEG00005003701	rtbdn (ENSMZEG00005003679) ##22	junbb (ENSMZEG00005003658)	hook2 (ENSMZEG00005003284)	trir (ENSMZEG00005003258)	ubn2b (ENSMZEG00005003197)	rpsa (ENSMZEG00005003155)	slc25a38a (ENSMZEG00005003047)	MYH9 (ENSMZEG00005002935)	txn2 (ENSMZEG00005002916)	ENSMZEG00005002911	DDX39A (ENSMZEG00005002864)	ENSMZEG00005002654	ENSMZEG00005002629	ENSMZEG00005002600	pkn1b (ENSMZEG00005002537)	ENSMZEG00005002505
Lyretail cichlid	MODERN SPECIES	423	mcm5 (ENSNBRG00000012070)	hmox1a (ENSNBRG00000011786)	ENSNBRG00000011779	foxred2 (ENSNBRG00000011754)	ankrd54 (ENSNBRG00000011732)	hmgxb4a (ENSNBRG00000011693)	si:dkeyp-69e1.8 (ENSNBRG00000011683)	foxd7 (ENSNBRG00000011668)	s1pr5a (ENSNBRG00000011662)	spc24 (ENSNBRG00000011610)	kri1 (ENSNBRG00000011580)	ldlra (ENSNBRG00000011554)	smarca4a (ENSNBRG00000011457)	ATG4D (ENSNBRG00000011391)	MAST1 (ENSNBRG00000011320)	rtbdn (ENSNBRG00000011306) ##22	junbb (ENSNBRG00000011282)	hook2 (ENSNBRG00000010993)	trir (ENSNBRG00000010941)	ubn2b (ENSNBRG00000010895)	rpsa (ENSNBRG00000010854)	slc25a38a (ENSNBRG00000010824)	MYH9 (ENSNBRG00000010730)	ENSNBRG00000010711	DDX39A (ENSNBRG00000010679)	ENSNBRG00000010417	ENSNBRG00000010351	ENSNBRG00000010335	pkn1b (ENSNBRG00000010293)	ENSNBRG00000010276	ENSNBRG00000010264
Nile tilapia	MODERN SPECIES	16	mcm5 (ENSONIG00000008233)	hmox1a (ENSONIG00000036898)	ENSONIG00000021075	foxred2 (ENSONIG00000008228)	ankrd54 (ENSONIG00000008226)	hmgxb4a (ENSONIG00000008225)	si:dkeyp-69e1.8 (ENSONIG00000008223)	foxd7 (ENSONIG00000041330)	s1pr5a (ENSONIG00000021073)	spc24 (ENSONIG00000008221)	kri1 (ENSONIG00000008218)	ldlra (ENSONIG00000008214)	smarca4a (ENSONIG00000008196)	ATG4D (ENSONIG00000043096)	MAST1 (ENSONIG00000008189)	rtbdn (ENSONIG00000008184) ##22	junbb (ENSONIG00000021072)	hook2 (ENSONIG00000008175)	trir (ENSONIG00000038123)	ubn2b (ENSONIG00000008172)	rpsa (ENSONIG00000008163)	slc25a38a (ENSONIG00000008160)	MYH9 (ENSONIG00000008128)	txn2 (ENSONIG00000008126)	ENSONIG00000008125	DDX39A (ENSONIG00000036607)	ENSONIG00000028312	ENSONIG00000008115	ENSONIG00000008110	pkn1b (ENSONIG00000008107)	ENSONIG00000031168
Midas cichlid	MODERN SPECIES	80	gcat (ENSACIG00000022210)	mcm5 (ENSACIG00000022193)	hmox1a (ENSACIG00000021980)	foxred2 (ENSACIG00000021951)	ankrd54 (ENSACIG00000021835)	hmgxb4a (ENSACIG00000021800)	si:dkeyp-69e1.8 (ENSACIG00000021792)	foxd7 (ENSACIG00000021788)	s1pr5a (ENSACIG00000021777)	spc24 (ENSACIG00000021764)	kri1 (ENSACIG00000021726)	ldlra (ENSACIG00000021617)	smarca4a (ENSACIG00000021550)	ATG4D (ENSACIG00000021464)	MAST1 (ENSACIG00000021403)	rtbdn (ENSACIG00000021389) ##22	junbb (ENSACIG00000021369)	hook2 (ENSACIG00000021128)	trir (ENSACIG00000021095)	ubn2b (ENSACIG00000021073)	rpsa (ENSACIG00000021049)	slc25a38a (ENSACIG00000020998)	MYH9 (ENSACIG00000020930)	txn2 (ENSACIG00000020923)	ENSACIG00000020913	DDX39A (ENSACIG00000020898)	ENSACIG00000020690	ENSACIG00000020666	pkn1b (ENSACIG00000020637)	ENSACIG00000020625	ENSACIG00000020612
Tiger tail seahorse	MODERN SPECIES	506	zgc:63470 (ENSHCOG00000009790)	rela (ENSHCOG00000009779)	PPP1CB (ENSHCOG00000009767)	SLC29A2 (ENSHCOG00000000638)	ift57 (ENSHCOG00000009743)	SORCS2 (ENSHCOG00000009730)	s1pr5a (ENSHCOG00000009647)	spc24 (ENSHCOG00000009636)	kri1 (ENSHCOG00000009624)	ldlra (ENSHCOG00000009609)	smarca4a (ENSHCOG00000009510)	ATG4D (ENSHCOG00000009439)	MAST1 (ENSHCOG00000009422)	ENSHCOG00000009388	ENSHCOG00000009379	rtbdn (ENSHCOG00000009346) ##22	junbb (ENSHCOG00000009342)	hook2 (ENSHCOG00000009310)	trir (ENSHCOG00000009299)	ubn2b (ENSHCOG00000009284)	rpsa (ENSHCOG00000009232)	slc25a38a (ENSHCOG00000009218)	MYH9 (ENSHCOG00000009201)	txn2 (ENSHCOG00000009131)	ENSHCOG00000009120	DDX39A (ENSHCOG00000009111)	gcat (ENSHCOG00000009094)	tom1 (ENSHCOG00000009039)	zgc:171844 (ENSHCOG00000009022)	mfsd6l (ENSHCOG00000009008)	ENSHCOG00000009006
Pinecone sodierfish	MODERN SPECIES	22	mcm5 (ENSMMDG00005006384)	hmox1a (ENSMMDG00005006394)	foxred2 (ENSMMDG00005006400)	ankrd54 (ENSMMDG00005006413)	hmgxb4a (ENSMMDG00005006426)	si:dkeyp-69e1.8 (ENSMMDG00005006430)	foxd7 (ENSMMDG00005006431)	s1pr5a (ENSMMDG00005006433)	spc24 (ENSMMDG00005006434)	kri1 (ENSMMDG00005006438)	ldlra (ENSMMDG00005006489)	smarca4a (ENSMMDG00005010874)	ENSMMDG00005019256	ATG4D (ENSMMDG00005019261)	ENSMMDG00005019264	rtbdn (ENSMMDG00005019269) ##22	junbb (ENSMMDG00005019271)	hook2 (ENSMMDG00005019286)	trir (ENSMMDG00005019306)	ubn2b (ENSMMDG00005019309)	TTC26 (ENSMMDG00005019320)	rpsa (ENSMMDG00005019334)	slc25a38a (ENSMMDG00005019340)	MYH9 (ENSMMDG00005019553)	txn2 (ENSMMDG00005021474)	ENSMMDG00005021478	DDX39A (ENSMMDG00005021494)	ENSMMDG00005021527	ENSMMDG00005021529	ENSMMDG00005021533	pkn1b (ENSMMDG00005021575)
Cod	MODERN SPECIES	11	nptx1l (ENSGMOG00000003164)	ENSGMOG00000003180	ENSGMOG00000027468	ENSGMOG00000036899	foxred2 (ENSGMOG00000004592)	ankrd54 (ENSGMOG00000004561)	hmgxb4a (ENSGMOG00000004531)	si:dkeyp-69e1.8 (ENSGMOG00000025395)	spc24 (ENSGMOG00000002830)	kri1 (ENSGMOG00000002769)	ldlra (ENSGMOG00000002735)	smarca4a (ENSGMOG00000002649)	ENSGMOG00000035020	ENSGMOG00000035221	MAST1 (ENSGMOG00000002538)	rtbdn (ENSGMOG00000028213) ##22	junbb (ENSGMOG00000002596)	hook2 (ENSGMOG00000018181)	trir (ENSGMOG00000034793)	ubn2b (ENSGMOG00000011209)	ENSGMOG00000033837	slc25a38a (ENSGMOG00000011227)	ENSGMOG00000011235	txn2 (ENSGMOG00000027676)	ENSGMOG00000032786	ENSGMOG00000011287	ENSGMOG00000026219	ENSGMOG00000032601	ENSGMOG00000036073	pkn1b (ENSGMOG00000010775)	ENSGMOG00000029700
Protacanthopterygii	ANCESTRAL SPECIES	8	ENSGT00390000017673.b.l	ENSGT00640000091519	ENSGT00940000157805	ENSGT00390000012436.g	ENSGT00940000165343.c.b	ENSGT00940000157140.b.b.b	ENSGT00470000042444	ENSGT00940000161143	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000154277.b.b.b	ENSGT00940000155828	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267.e	ENSGT00940000155858.e	ENSGT00390000000159	ENSGT00950000183099.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	998															ENSGT00940000157700.d.a.a	ENSGT00950000183144.B.`b ##22	ENSGT00940000155828	ENSGT00940000161195.a.a.e	ENSGT00940000160152.l	ENSGT00390000012267.e.a
Salmoninae_a	ANCESTRAL SPECIES	158															ENSGT00940000157700.d.a.a	ENSGT00950000183144.B.`b ##22	ENSGT00940000155828	ENSGT00940000161195.a.a.e	ENSGT00940000160152.k.a	ENSGT00390000012267.f	ENSGT00940000160152.l	ENSGT00390000012267.e.a	ENSGT00940000155858.e.e	ENSGT00390000000159.i.a	ENSGT00950000183099.a.a.b	ENSGT00550000075117.m.b.d	ENSGT00940000155632.o	ENSGT00530000064086.`b	ENSGT00940000165172.a.f.a	ENSGT00940000154912.u.a.d	ENSGT00940000177829
Oncorhynchus	ANCESTRAL SPECIES	65	ENSGT00640000091519.f.a	ENSGT00940000157805.h	ENSGT00390000012436.g.f	ENSGT00940000165343.c.b.d	ENSGT00940000157140.b.b.b.c.a	ENSGT00940000160757.n	ENSGT00990000210763.a	ENSGT01050000244887.A.a.a.a.j.d	ENSGT00390000005584.a.b	ENSGT00390000005605.e	ENSGT00940000154819.a.b.c.a.g.b	ENSGT00940000156887.a.e.c.a.a	ENSGT00950000182923.A.ib.a.a	ENSGT00530000063000.a.a.b.i.c.b	ENSGT00940000157700.d.a.a	ENSGT00950000183144.B.`b ##22	ENSGT00940000154277.b.b.b.b.a.a	ENSGT00940000155828	ENSGT00940000161195.a.a.e	ENSGT00940000160152.k.a	ENSGT00390000012267.f	ENSGT00940000160152.l	ENSGT00390000012267.e.a	ENSGT00940000155858.e.e	ENSGT00390000000159.i.a	ENSGT00950000183099.a.a.b	ENSGT00550000075117.m.b.d.c	ENSGT00940000155632.o.b	ENSGT00530000064086.`b	ENSGT00940000165172.a.f.a	ENSGT00940000154912.u.a.d
Rainbow trout	MODERN SPECIES	4	hmgxb4a (ENSOMYG00000022467)	si:dkeyp-69e1.8 (ENSOMYG00000022458)	foxd7 (ENSOMYG00000022453)	il-8 (ENSOMYG00000022444)	ENSOMYG00000022433	s1pr5a (ENSOMYG00000022427)	spc24 (ENSOMYG00000022421)	kri1 (ENSOMYG00000022391)	ENSOMYG00000067083	ldlra (ENSOMYG00000021575)	smarca4a (ENSOMYG00000021175)	ENSOMYG00000021049	ENSOMYG00000021036	ENSOMYG00000053440	MAST1 (ENSOMYG00000020896)	rtbdn (ENSOMYG00000020840) ##22	ENSOMYG00000020832	junbb (ENSOMYG00000020826)	ENSOMYG00000068385	HOOK2 (ENSOMYG00000020139)	trir (ENSOMYG00000020022)	ubn2b (ENSOMYG00000019996)	ENSOMYG00000019788	ENSOMYG00000019560	ENSOMYG00000019515	ENSOMYG00000019426	ENSOMYG00000019364	ENSOMYG00000019358	ENSOMYG00000019268	ENSOMYG00000019130	ENSOMYG00000058328
Oncorhynchus_a	ANCESTRAL SPECIES	44	ENSGT00640000091519.f.a	ENSGT00940000157805.h	ENSGT00390000012436.g.f	ENSGT00940000165343.c.b.d	ENSGT00940000157140.b.b.b.c.a	ENSGT00940000160757.n	ENSGT00990000210763.a	ENSGT01050000244887.A.a.a.a.j.d	ENSGT00390000005584.a.b	ENSGT00390000005605.e	ENSGT00940000154819.a.b.c.a.g.b	ENSGT00940000156887.a.e.c.a.a	ENSGT00950000182923.A.ib.a.a	ENSGT00530000063000.a.a.b.i.c.b	ENSGT00940000157700.d.a.a	ENSGT00950000183144.B.`b ##22	ENSGT00940000154277.b.b.b.b.a.a	ENSGT00940000155828	ENSGT00940000161195.a.a.e	ENSGT00940000160152.k.a	ENSGT00390000012267.f	ENSGT00940000155858.e.e	ENSGT00390000000159.i.a	ENSGT00950000183099.a.a.b	ENSGT00550000075117.m.b.d.c	ENSGT00940000155632.o.b	ENSGT00530000064086.`b	ENSGT00940000165172.a.f.a	ENSGT00940000154912.u.a.d	ENSGT00940000159311.d.a.a.i.a.c	ENSGT00940000160024.c.a.b
Coho salmon	MODERN SPECIES	1	foxred2 (ENSOKIG00005014539)	ankrd54 (ENSOKIG00005014514)	hmgxb4a (ENSOKIG00005014505)	si:dkeyp-69e1.8 (ENSOKIG00005014497)	foxd7 (ENSOKIG00005014487)	ENSOKIG00005014478	ENSOKIG00005014394	s1pr5a (ENSOKIG00005022154)	spc24 (ENSOKIG00005022132)	kri1 (ENSOKIG00005022118)	ldlra (ENSOKIG00005022079)	smarca4a (ENSOKIG00005021743)	ENSOKIG00005021672	ATG4D (ENSOKIG00005021601)	MAST1 (ENSOKIG00005020950)	rtbdn (ENSOKIG00005020855) ##22	PRDX2 (ENSOKIG00005020821)	junbb (ENSOKIG00005020817)	HOOK2 (ENSOKIG00005020304)	trir (ENSOKIG00005020242)	TTC26 (ENSOKIG00005019958)	ENSOKIG00005019727	slc25a38a (ENSOKIG00005019706)	MYH9 (ENSOKIG00005019571)	TXN2 (ENSOKIG00005019510)	ENSOKIG00005019502	DDX39A (ENSOKIG00005019436)	ENSOKIG00005019425	ENSOKIG00005019420	ENSOKIG00005019414	ENSOKIG00005019404
Chinook salmon	MODERN SPECIES	19	GID4 (ENSOTSG00005014804)	drc3 (ENSOTSG00005014802)	TOM1L2 (ENSOTSG00005014787)	srebf1 (ENSOTSG00005014784)	ENSOTSG00005014783	ENSOTSG00005014782	GGA3 (ENSOTSG00005014572)	mrps7 (ENSOTSG00005014567)	MIF4GD (ENSOTSG00005014564)	slc25a19 (ENSOTSG00005014559)	ENSOTSG00005014558	ENSOTSG00005014557	ENSOTSG00005014556	ATG4D (ENSOTSG00005014555)	MAST1 (ENSOTSG00005013712)	rtbdn (ENSOTSG00005013711) ##22	ENSOTSG00005013710	junbb (ENSOTSG00005013709)	ENSOTSG00005013708	HOOK2 (ENSOTSG00005013561)	trir (ENSOTSG00005013560)	ubn2b (ENSOTSG00005013552)	TTC26 (ENSOTSG00005012598)	rpsa (ENSOTSG00005012458)	slc25a38a (ENSOTSG00005012457)	txn2 (ENSOTSG00005012455)	ENSOTSG00005012454	DDX39A (ENSOTSG00005012443)	ENSOTSG00005012439	ENSOTSG00005012438	ENSOTSG00005012437
Salmo	ANCESTRAL SPECIES	69	ENSGT00440000038745.a.a.b.a	ENSGT00940000156865.b.h	ENSGT00940000155729.r.a.b	ENSGT01050000244824.G.k.c	ENSGT00390000017673.b.l.a	ENSGT00640000091519.f	ENSGT00940000157805.g	ENSGT00390000012436.g.f.b	ENSGT00940000160757.k	ENSGT01050000244887.A.a.a.a.j.c	ENSGT00390000005605.f	ENSGT00940000154819.a.b.c.a.h	ENSGT00940000156887.a.e.b	ENSGT00530000063000.a.a.b.i.c.b	ENSGT00940000157700.d.b	ENSGT00950000183144.B.`b ##22	ENSGT00940000154277.b.b.b.b.b	ENSGT00940000161195.a.a.f	ENSGT00940000160152.k.b	ENSGT00390000012267.e.b.a	ENSGT00940000155858.e.f	ENSGT00940000155632.o.d	ENSGT00530000064086.ab	ENSGT00940000165172.a.f.b	ENSGT00940000154912.u.a.c	ENSGT00940000159311.d.a.a.i.b	ENSGT00940000156166.b.a.a.d	ENSGT00530000063861.a.f	ENSGT00940000154990.fb.b.b	ENSGT01100000263820.b	ENSGT00950000183036.b.f.k
Atlantic salmon	MODERN SPECIES	22	tom1 (ENSSSAG00000091826)	gcat (ENSSSAG00000070799)	mcm5 (ENSSSAG00000040979)	hmox1a (ENSSSAG00000070727)	foxred2 (ENSSSAG00000070717)	hmgxb4a (ENSSSAG00000026951)	si:dkeyp-69e1.8 (ENSSSAG00000070767)	mip2a (ENSSSAG00000070770)	ENSSSAG00000006510	s1pr5a (ENSSSAG00000089324)	kri1 (ENSSSAG00000070681)	ldlra (ENSSSAG00000069976)	smarca4a (ENSSSAG00000069499)	ENSSSAG00000085374	MAST1 (ENSSSAG00000068180)	rtbdn (ENSSSAG00000001518) ##22	ENSSSAG00000117056	junbb (ENSSSAG00000084114)	HOOK2 (ENSSSAG00000009349)	trir (ENSSSAG00000102091)	ubn2b (ENSSSAG00000067711)	ENSSSAG00000067676	ENSSSAG00000116040	ENSSSAG00000092859	ENSSSAG00000084151	ENSSSAG00000066742	ENSSSAG00000066700	ENSSSAG00000097197	gfi1b (ENSSSAG00000066672)	ENSSSAG00000110041	pkn1b (ENSSSAG00000045359)
River trout	MODERN SPECIES	25	hmox1a (ENSSTUG00000004862)	foxred2 (ENSSTUG00000004843)	ankrd54 (ENSSTUG00000004828)	hmgxb4a (ENSSTUG00000004802)	si:dkeyp-69e1.8 (ENSSTUG00000004797)	foxd7 (ENSSTUG00000004790)	ENSSTUG00000004785	ENSSTUG00000004778	s1pr5a (ENSSTUG00000004772)	spc24 (ENSSTUG00000004767)	kri1 (ENSSTUG00000004737)	ldlra (ENSSTUG00000004443)	smarca4a (ENSSTUG00000003900)	ATG4D (ENSSTUG00000019419)	MAST1 (ENSSTUG00000018719)	rtbdn (ENSSTUG00000018684) ##22	ENSSTUG00000018679	junbb (ENSSTUG00000018671)	ENSSTUG00000018644	HOOK2 (ENSSTUG00000017625)	trir (ENSSTUG00000017553)	ubn2b (ENSSTUG00000017508)	ENSSTUG00000017497	SLC25A38 (ENSSTUG00000017494)	MYH9 (ENSSTUG00000013961)	txn2 (ENSSTUG00000013724)	ENSSTUG00000013717	DDX39A (ENSSTUG00000013590)	ENSSTUG00000013557	ENSSTUG00000013547	ENSSTUG00000013522
Salmoninae	ANCESTRAL SPECIES		ENSGT00940000157140.b.b.b.c.b	ENSGT01030000234940.h.a	ENSGT00990000210763	ENSGT01050000244887.A.a.a.a.j	ENSGT00390000005584.a.a	ENSGT00390000005605.f	ENSGT00940000154819.a.b.c.a.g	ENSGT00940000156887.a.e	ENSGT00950000182923.A.ib.a.a	ENSGT00530000063000.a.a.b.i.c.b	ENSGT00940000157700.d.b	ENSGT00940000156887.a.f.a	ENSGT00950000182923.A.ib.a.b	ENSGT00530000063000.a.a.b.i.c.a	ENSGT00940000157700.d.a.b	ENSGT00950000183144.B.ab ##22	ENSGT00940000154277.b.b.b.b	ENSGT00940000161195.a.a.f	ENSGT00940000160152.k	ENSGT00390000012267.e.b	ENSGT00940000155858.e	ENSGT00390000000159.i.b	ENSGT00950000183099.a.a.a	ENSGT00950000183099.a.b	ENSGT00550000075117.m.b.c	ENSGT00530000064086.`b	ENSGT00390000000159.i.a	ENSGT00950000183099.a.a.b	ENSGT00550000075117.m.b.d	ENSGT00940000155632.o	ENSGT00530000064086.ab
Huchen	DUPLICATION
Huchen	MODERN SPECIES	317	ankrd54 (ENSHHUG00000039611)	hmgxb4a (ENSHHUG00000039598)	si:dkeyp-69e1.8 (ENSHHUG00000039593)	foxd7 (ENSHHUG00000039586)	ENSHHUG00000039565	s1pr5a (ENSHHUG00000039562)	spc24 (ENSHHUG00000039554)	kri1 (ENSHHUG00000039523)	ldlra (ENSHHUG00000039243)	smarca4a (ENSHHUG00000039198)	ENSHHUG00000039187	ENSHHUG00000039166	ATG4D (ENSHHUG00000039142)	ENSHHUG00000039134	MAST1 (ENSHHUG00000039044)	rtbdn (ENSHHUG00000039030) ##22	ENSHHUG00000039023	junbb (ENSHHUG00000039017)	HOOK2 (ENSHHUG00000038729)	trir (ENSHHUG00000038721)	ubn2b (ENSHHUG00000038701)	TTC26 (ENSHHUG00000038651)	rpsa (ENSHHUG00000038579)	SLC25A38 (ENSHHUG00000038536)	MYH9 (ENSHHUG00000036440)	txn2 (ENSHHUG00000036406)	ENSHHUG00000036396	DDX39A (ENSHHUG00000036327)	ENSHHUG00000036322	ENSHHUG00000036319	ENSHHUG00000036315
Huchen	MODERN SPECIES	953			ENSHHUG00000017310	ENSHHUG00000017362	s1pr5a (ENSHHUG00000017377)	spc24 (ENSHHUG00000017386)	kri1 (ENSHHUG00000017399)	ldlra (ENSHHUG00000017448)	smarca4a (ENSHHUG00000018463)	ENSHHUG00000018512	ATG4D (ENSHHUG00000018522)	ENSHHUG00000018532	ENSHHUG00000018535	ENSHHUG00000018544	ENSHHUG00000018546	rtbdn (ENSHHUG00000018556) ##22	ENSHHUG00000018569	junbb (ENSHHUG00000018764)	HOOK2 (ENSHHUG00000018768)	trir (ENSHHUG00000018821)	ubn2b (ENSHHUG00000018825)	TTC26 (ENSHHUG00000018854)	rpsa (ENSHHUG00000018951)	slc25a38a (ENSHHUG00000019008)	MYH9 (ENSHHUG00000019015)	txn2 (ENSHHUG00000019319)	ENSHHUG00000019325	DDX39A (ENSHHUG00000019344)	ENSHHUG00000019550	ENSHHUG00000019553
Salmoninae_a	ANCESTRAL SPECIES	37	ENSGT00940000157140.b.b.b.c.a	ENSGT00940000160757	ENSGT00990000210763	ENSGT01050000244887.A.a.a.a.j.d	ENSGT00390000005584.a.b	ENSGT00390000005605.e	ENSGT00940000154819.a.b.c.a.g	ENSGT00940000156887.a.e	ENSGT00950000182923.A.ib.a.a	ENSGT00530000063000.a.a.b.i.c.b	ENSGT00940000157700.d.b	ENSGT00940000156887.a.f.a	ENSGT00950000182923.A.ib.a.b	ENSGT00530000063000.a.a.b.i.c.a	ENSGT00940000157700.d.a.b	ENSGT00950000183144.B.ab ##22	ENSGT00940000154277.b.b.b.b.a	ENSGT00940000154277.b.b.b.a	ENSGT00940000161195.a.a.f	ENSGT00940000160152.k.b	ENSGT00390000012267.e.b	ENSGT00940000155858.e.f	ENSGT00390000000159.i.b	ENSGT00950000183099.a.a.a	ENSGT00940000165172.a.e	ENSGT00940000154912.u.a.c	ENSGT00940000159311.d.a.a.i.a	ENSGT00940000160024.c.a.b	ENSGT00940000159311.d.a.a.i.b	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a
Oncorhynchus	ANCESTRAL SPECIES	37	ENSGT00530000063599.A.g	ENSGT00440000038745.a.a.b.a.a.a.a	ENSGT00940000156865.b.e	ENSGT00940000155729.r.b	ENSGT01050000244824.G.k.b	ENSGT00390000017673.b.l.b.b	ENSGT00640000091519.f.b	ENSGT00940000157805.g	ENSGT00390000012436.g.e	ENSGT00940000165343.c.b.c	ENSGT00940000157140.b.b.b.c.b	ENSGT00940000156887.a.e.c.b	ENSGT00950000182923.A.hb	ENSGT00530000063000.a.a.b.i.c.a	ENSGT00940000157700.d.a.b	ENSGT00950000183144.B.ab ##22	ENSGT00940000154277.b.b.b.b.a.b	ENSGT00940000154277.b.b.b.a	ENSGT00940000161195.a.a.f	ENSGT00940000160152.k.b	ENSGT00390000012267.e.b	ENSGT00940000155858.e.f	ENSGT00390000000159.i.b	ENSGT00950000183099.a.a.a	ENSGT00550000075117.m.b.d.d	ENSGT00940000155632.o.a	ENSGT00530000064086.ab	ENSGT00940000165172.a.f.b	ENSGT00940000154912.u.a.c	ENSGT00940000159311.d.a.a.i.a.d	ENSGT00940000156166.b.a.a.b
Rainbow trout	MODERN SPECIES	3	foxred2 (ENSOMYG00000029047)	ankrd54 (ENSOMYG00000029023)	hmgxb4a (ENSOMYG00000029002)	si:dkeyp-69e1.8 (ENSOMYG00000028962)	foxd7 (ENSOMYG00000056670)	CXCL8 (ENSOMYG00000028934)	s1pr5a (ENSOMYG00000028915)	spc24 (ENSOMYG00000028907)	kri1 (ENSOMYG00000028885)	ldlra (ENSOMYG00000028150)	smarca4a (ENSOMYG00000027454)	ENSOMYG00000027277	ENSOMYG00000027267	ENSOMYG00000027244	MAST1 (ENSOMYG00000024088)	rtbdn (ENSOMYG00000023506) ##22	ENSOMYG00000069568	junbb (ENSOMYG00000023473)	HOOK2 (ENSOMYG00000022731)	trir (ENSOMYG00000022503)	ubn2b (ENSOMYG00000022462)	ENSOMYG00000022207	ENSOMYG00000031514	ENSOMYG00000022116	ENSOMYG00000021304	ENSOMYG00000020994	ENSOMYG00000020990	ENSOMYG00000020948	ENSOMYG00000020912	ENSOMYG00000020884	ENSOMYG00000020876
Oncorhynchus_a	ANCESTRAL SPECIES	55	ENSGT00950000182803.A.a.b.k.b.g	ENSGT00940000155004.t.j	ENSGT00940000157864.a.b.h	ENSGT00390000015579.a.b.e	ENSGT00940000153578.A.e.h	ENSGT00940000154705.A.a.h	ENSGT00940000155563.k.a.d.a.a	ENSGT01050000244891.E.a.b.f	ENSGT00940000154830.c.c	ENSGT00940000158772.b.i	ENSGT00940000153882.a.b.a.b.e	ENSGT00940000156887.a.e.c.b	ENSGT00950000182923.A.hb	ENSGT00530000063000.a.a.b.i.c.a	ENSGT00940000157700.d.a.b	ENSGT00950000183144.B.ab ##22	ENSGT00940000154277.b.b.b.a	ENSGT00940000161195.a.a.f	ENSGT00940000160152.k.b	ENSGT00390000012267.e.b	ENSGT00940000155858.e.f	ENSGT00390000000159.i.b	ENSGT00950000183099.a.a.a	ENSGT00550000075117.m.b.d.d	ENSGT00940000155632.o.a	ENSGT00530000064086.ab	ENSGT00940000165172.a.f.b	ENSGT00940000154912.u.a.c	ENSGT00940000159311.d.a.a.i.a.d	ENSGT00940000156166.b.a.a.b	ENSGT00530000063861.a.c
Chinook salmon	MODERN SPECIES	33	rasd4 (ENSOTSG00005040832)	PRPSAP1 (ENSOTSG00005040759)	ENSOTSG00005040753	SPHK1 (ENSOTSG00005040750)	AANAT (ENSOTSG00005040747)	ddx5 (ENSOTSG00005040745)	smurf2 (ENSOTSG00005040717)	kpna2 (ENSOTSG00005040684)	ENSOTSG00005040677	GRB2 (ENSOTSG00005040663)	MCHR1 (ENSOTSG00005040660)	smarca4a (ENSOTSG00005036691)	ENSOTSG00005036687	ATG4D (ENSOTSG00005036686)	MAST1 (ENSOTSG00005035980)	rtbdn (ENSOTSG00005035971) ##22	ENSOTSG00005035970	junbb (ENSOTSG00005035968)	HOOK2 (ENSOTSG00005035326)	trir (ENSOTSG00005035324)	ubn2b (ENSOTSG00005035323)	TTC26 (ENSOTSG00005035305)	ENSOTSG00005035300	ENSOTSG00005035299	ENSOTSG00005035297	IFT27 (ENSOTSG00005035296)	SYNGR1 (ENSOTSG00005035295)	ENSOTSG00005035293	ENSOTSG00005035292	ENSOTSG00005035291	GPRC5A (ENSOTSG00005035290)
Coho salmon	MODERN SPECIES	26	si:dkeyp-69e1.8 (ENSOKIG00005018169)	foxd7 (ENSOKIG00005018155)	ENSOKIG00005018149	ENSOKIG00005018132	ENSOKIG00005018117	ENSOKIG00005018100	s1pr5a (ENSOKIG00005018093)	spc24 (ENSOKIG00005018079)	kri1 (ENSOKIG00005018066)	ldlra (ENSOKIG00005017598)	ENSOKIG00005017571	smarca4a (ENSOKIG00005017216)	ENSOKIG00005017153	ATG4D (ENSOKIG00005017147)	MAST1 (ENSOKIG00005015826)	rtbdn (ENSOKIG00005015720) ##22	ENSOKIG00005015705	junbb (ENSOKIG00005015699)	HOOK2 (ENSOKIG00005015416)	trir (ENSOKIG00005015385)	ubn2b (ENSOKIG00005015236)	TTC26 (ENSOKIG00005014788)	ENSOKIG00005014719	ENSOKIG00005014711	MYH9 (ENSOKIG00005011933)	ENSOKIG00005011644	ENSOKIG00005011630	DDX39A (ENSOKIG00005011257)	ENSOKIG00005011239	ENSOKIG00005011233	ENSOKIG00005011224
Salmo	ANCESTRAL SPECIES	53	ENSGT00390000017673.b.l.b.a	ENSGT00640000091519.e	ENSGT00390000012436.g.f.a	ENSGT00940000165343.c.b.d	ENSGT00940000157140.b.b.b.c.a	ENSGT00940000160757.l	ENSGT00990000210763	ENSGT01050000244887.A.a.a.a.j.d	ENSGT00390000005584.b	ENSGT00390000005605.e	ENSGT00940000154819.a.b.c.a.g	ENSGT00940000156887.a.e.a	ENSGT00950000182923.A.ib.a.a	ENSGT00530000063000.a.a.b.i.c.a	ENSGT00940000157700.d.a.a	ENSGT00950000183144.B.ab ##22	ENSGT00940000154277.b.b.b.b.a	ENSGT00940000161195.a.a.e	ENSGT00940000160152.k.a	ENSGT00390000012267.e.b.b	ENSGT00940000155858.e.e	ENSGT00390000000159.i.a	ENSGT00950000183099.a.b	ENSGT00550000075117.m.b.d	ENSGT00940000155632.o.c	ENSGT00530000064086.`b	ENSGT00940000165172.a.f.a	ENSGT00940000154912.u.a.d	ENSGT00940000159311.d.a.a.i.a	ENSGT00940000160024.c.a.b	ENSGT00940000156166.b.a.a.c
River trout	MODERN SPECIES		ENSSTUG00000012711	ankrd54 (ENSSTUG00000012695)	hmgxb4a (ENSSTUG00000012674)	si:dkeyp-69e1.8 (ENSSTUG00000012665)	foxd7 (ENSSTUG00000012658)	ENSSTUG00000012638	ENSSTUG00000012498	s1pr5a (ENSSTUG00000012490)	spc24 (ENSSTUG00000012473)	kri1 (ENSSTUG00000012419)	ldlra (ENSSTUG00000012337)	smarca4a (ENSSTUG00000004756)	ENSSTUG00000004499	ATG4D (ENSSTUG00000004457)	MAST1 (ENSSTUG00000003591)	rtbdn (ENSSTUG00000003533) ##22	ENSSTUG00000003523	junbb (ENSSTUG00000003514)	HOOK2 (ENSSTUG00000003162)	trir (ENSSTUG00000003123)	ubn2b (ENSSTUG00000002990)	TTC26 (ENSSTUG00000002163)	rpsa (ENSSTUG00000002092)	slc25a38a (ENSSTUG00000002078)	MYH9 (ENSSTUG00000001873)	txn2 (ENSSTUG00000001817)	ENSSTUG00000001809	DDX39A (ENSSTUG00000001691)	ENSSTUG00000001676	ENSSTUG00000001661	ENSSTUG00000001648
Atlantic salmon	MODERN SPECIES	25	mcm5 (ENSSSAG00000005359)	HMOX (ENSSSAG00000006231)	foxred2 (ENSSSAG00000006269)	hmgxb4a (ENSSSAG00000006466)	si:dkeyp-69e1.8 (ENSSSAG00000006481)	foxd7 (ENSSSAG00000105207)	il8 (ENSSSAG00000006498)	ENSSSAG00000006518	s1pr5a (ENSSSAG00000121767)	kri1 (ENSSSAG00000005024)	ldlra (ENSSSAG00000005295)	smarca4a (ENSSSAG00000096866)	ENSSSAG00000008548	ENSSSAG00000008557	MAST1 (ENSSSAG00000008779)	rbp (ENSSSAG00000108597) ##22	ENSSSAG00000059068	junbb (ENSSSAG00000084145)	HOOK2 (ENSSSAG00000067743)	ubn2b (ENSSSAG00000037952)	ENSSSAG00000039421	ENSSSAG00000041429	ENSSSAG00000109013	ENSSSAG00000041571	ENSSSAG00000105848	ENSSSAG00000066709	ddx39 (ENSSSAG00000045119)	ENSSSAG00000045176	ENSSSAG00000045195	ENSSSAG00000098070	ENSSSAG00000045313
Northern pike	MODERN SPECIES	10	ENSELUG00000011657	flii (ENSELUG00000011761)	TOP3A (ENSELUG00000011817)	smcr8a (ENSELUG00000011865)	shmt1 (ENSELUG00000011924)	ENSELUG00000011939	ENSELUG00000029433	ENSELUG00000029264	arl6ip1 (ENSELUG00000011980)	smg1 (ENSELUG00000012072)	clec19a (ENSELUG00000012124)	SYT17 (ENSELUG00000012167)	ENSELUG00000012213	ATG4D (ENSELUG00000000396)	MAST1 (ENSELUG00000011095)	rtbdn (ENSELUG00000010978) ##22	junbb (ENSELUG00000010952)	ENSELUG00000010934	hook2 (ENSELUG00000010917)	trir (ENSELUG00000010844)	ubn2b (ENSELUG00000010871)	TTC26 (ENSELUG00000010823)	rpsa (ENSELUG00000010762)	slc25a38a (ENSELUG00000010718)	MYH9 (ENSELUG00000010704)	txn2 (ENSELUG00000010652)	ENSELUG00000010612	DDX39A (ENSELUG00000010581)	ENSELUG00000010551	ENSELUG00000010543	ENSELUG00000010531
Otomorpha	ANCESTRAL SPECIES	19														ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.v	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00530000063861.a	ENSGT00940000154990.fb.b	ENSGT00940000168611	ENSGT00950000183036.b.f	ENSGT00390000000976
Clupeiformes	ANCESTRAL SPECIES	17	ENSGT00940000153496.a.b.b	ENSGT00990000204948	ENSGT00940000175471	ENSGT00390000004010.a.b.a.a.e	ENSGT00940000164377	ENSGT00390000018570.a.a.b	ENSGT00940000160393	ENSGT00940000159290	ENSGT00390000018266	ENSGT00940000154915	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000161195.b	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00550000075117.m.b	ENSGT00940000155632.o	ENSGT00530000064086	ENSGT00940000165172.a	ENSGT00940000154912.u.b	ENSGT00940000159311.d.a.a	ENSGT00940000156166.b.a.a	ENSGT00940000177829	ENSGT00530000063861.a	ENSGT00940000154990.fb.b
Atlantic herring	MODERN SPECIES		pmp22a (ENSCHAG00000026735)	hs3st3b1a (ENSCHAG00000026733)	ARHGAP44 (ENSCHAG00000026709)	ENSCHAG00000026702	mfsd13al (ENSCHAG00000026699)	CDR2 (ENSCHAG00000026697)	SDR42E2 (ENSCHAG00000026689)	ENSCHAG00000026681	MOSMO (ENSCHAG00000026674)	kri1 (ENSCHAG00000026668)	ldlra (ENSCHAG00000026568)	smarca4a (ENSCHAG00000026467)	ENSCHAG00000026459	ATG4D (ENSCHAG00000026457)	MAST1 (ENSCHAG00000026419)	rtbdn (ENSCHAG00000026408) ##22	junbb (ENSCHAG00000026405)	slc25a38a (ENSCHAG00000026397)	MYH9 (ENSCHAG00000012446)	txn2 (ENSCHAG00000011915)	ENSCHAG00000011909	ddx39aa (ENSCHAG00000011776)	ENSCHAG00000011761	ENSCHAG00000011753	ENSCHAG00000011747	ENSCHAG00000011735	pkn1b (ENSCHAG00000001842)	ENSCHAG00000001198	MCOLN1 (ENSCHAG00000000876)	trappc5 (ENSCHAG00000000716)	pglyrp6 (ENSCHAG00000000673)
Denticle herring	MODERN SPECIES	17	ENSDCDG00000022969	tob1b (ENSDCDG00000022972)	spag9a (ENSDCDG00000022986)	ENSDCDG00000023135	kdelr2a (ENSDCDG00000023136)	mfsd13al (ENSDCDG00000023137)	CDR2 (ENSDCDG00000023138)	SDR42E2 (ENSDCDG00000023140)	ENSDCDG00000023145	kri1 (ENSDCDG00000023148)	ldlra (ENSDCDG00000023175)	smarca4a (ENSDCDG00000024187)	ENSDCDG00000024261	ATG4D (ENSDCDG00000002884)	MAST1 (ENSDCDG00000003154)	rtbdn (ENSDCDG00000004034) ##22	junba (ENSDCDG00000004036)	hook2 (ENSDCDG00000004051)	trir (ENSDCDG00000004249)	ubn2b (ENSDCDG00000004254)	slc25a38a (ENSDCDG00000004260)	MYH9 (ENSDCDG00000004285)	GUCY2C (ENSDCDG00000004520)	ENSDCDG00000004587	ENSDCDG00000004589	plbd1a (ENSDCDG00000004593)	pick1 (ENSDCDG00000004685)	ENSDCDG00000004704	ENSDCDG00000004705	ENSDCDG00000004707	ENSDCDG00000004717
Otophysi	ANCESTRAL SPECIES	358										ENSGT00940000155004.t	ENSGT00720000108861	ENSGT00940000157864.a.b	ENSGT00940000153578.A.e	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00390000012267	ENSGT00940000155858.e
Characiphysae	ANCESTRAL SPECIES	26	ENSGT00390000006009.a.a.a.c.b	ENSGT00390000006009.a.a.a.d.b	ENSGT00940000158816.c	ENSGT00940000159339.sb.b	ENSGT00940000159924.c.b	ENSGT00940000164904.b	ENSGT00950000182895.b.b	ENSGT00390000000204	ENSGT00940000157333.b	ENSGT00940000155004.t.a.a	ENSGT00720000108861	ENSGT00940000157864.a.b	ENSGT00940000153578.A.e	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183036.b.f	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.v.a	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b
Characiphysae_b	ANCESTRAL SPECIES	17	ENSGT00940000157428	ENSGT00940000154322.A.b.a	ENSGT00940000156843	ENSGT00390000006009.a.a.a.c.b	ENSGT00940000158816.c	ENSGT00940000159339.sb.b	ENSGT00940000159924.c.b	ENSGT00940000164904.b	ENSGT00950000182895.b.a.a	ENSGT00390000000204	ENSGT00940000157333.b	ENSGT00940000157864.a.b	ENSGT00940000153578.A.e	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00950000183036.b.f	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.v.a	ENSGT00940000165172.a	ENSGT00530000064086	ENSGT00940000155632.o	ENSGT00550000075117.m.b
Characoidei	ANCESTRAL SPECIES	90	ENSGT00940000157428	ENSGT00940000154322.A.b.a	ENSGT00940000156843	ENSGT00940000158816.c	ENSGT00940000159339.sb.b	ENSGT00940000159924.c.b	ENSGT00940000164904.b	ENSGT00390000000204	ENSGT00940000157333.b	ENSGT00940000155004.t.b	ENSGT00940000168137	ENSGT00940000157864.a.b	ENSGT00940000153578.A.e	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e	ENSGT00530000063960	ENSGT00390000000976	ENSGT00950000183036.b.f	ENSGT00940000168611	ENSGT00940000154990.fb.b	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.v.a	ENSGT00940000165172.a	ENSGT00530000064086
Red-bellied piranha	MODERN SPECIES	395											ENSPNAG00000006813	ENSPNAG00000017217	ENSPNAG00000017236	ENSPNAG00000005331	MAST1 (ENSPNAG00000017359)	rtbdn (ENSPNAG00000017387) ##22	junbb (ENSPNAG00000017419)	hook2 (ENSPNAG00000017447)	trir (ENSPNAG00000017464)	ubn2b (ENSPNAG00000017512)	TRAPPC5 (ENSPNAG00000003481)	MCOLN1 (ENSPNAG00000017540)	ENSPNAG00000003483
Mexicana tetra	MODERN SPECIES	15	ENSAMXG00000040763	mmd (ENSAMXG00000030092)	RBFOX3 (ENSAMXG00000042841)	jpt1b (ENSAMXG00000019411)	sumo2b (ENSAMXG00000019405)	NUP85 (ENSAMXG00000042274)	GGA3 (ENSAMXG00000019401)	cygb1 (ENSAMXG00000019396)	ENSAMXG00000002318	ENSAMXG00000042787	SPHK1 (ENSAMXG00000041303)	ENSAMXG00000005293	ENSAMXG00000019106	ENSAMXG00000042693	MAST1 (ENSAMXG00000005313)	rtbdn (ENSAMXG00000005331) ##22	junbb (ENSAMXG00000034822)	hook2 (ENSAMXG00000015035)	TRAPPC5 (ENSAMXG00000038506)	ubn2b (ENSAMXG00000015063)	trir (ENSAMXG00000042277)	MCOLN1 (ENSAMXG00000015134)	ENSAMXG00000029303	pkn1b (ENSAMXG00000015189)	ENSAMXG00000015212	ENSAMXG00000015228	ENSAMXG00000033415	ENSAMXG00000015240	ddx39ab (ENSAMXG00000018631)	ENSAMXG00000015267	txn2 (ENSAMXG00000038781)
Channel catfish	MODERN SPECIES	3	ENSIPUG00000021863	ENSIPUG00000021849	hn1 (ENSIPUG00000021843)	sumo2 (ENSIPUG00000021832)	nup85 (ENSIPUG00000021770)	ENSIPUG00000021739	ENSIPUG00000021725	cygb1 (ENSIPUG00000021713)	cygb1 (ENSIPUG00000021707)	fbf1 (ENSIPUG00000021673)	SPHK1 (ENSIPUG00000021631)	ENSIPUG00000021612	ENSIPUG00000021604	MAST1 (ENSIPUG00000021594)	ENSIPUG00000021579	rtbdn (ENSIPUG00000021562) ##22	junb (ENSIPUG00000021554)	hook2 (ENSIPUG00000021528)	c12h19orf43 (ENSIPUG00000021520)	ubn2b (ENSIPUG00000021459)	TRAPPC5 (ENSIPUG00000021452)	MCOLN1 (ENSIPUG00000021446)	ENSIPUG00000021440	pkn1b (ENSIPUG00000021417)	ENSIPUG00000021411	ENSIPUG00000021407	ENSIPUG00000021404	ENSIPUG00000021400	DDX39A (ENSIPUG00000021341)	ENSIPUG00000021335	txn2 (ENSIPUG00000021332)
Cyprinoidei	ANCESTRAL SPECIES	216											ENSGT00940000155004.t	ENSGT00940000157864.a.b	ENSGT00940000153578.A.e	ENSGT00530000063000.a.a.b.i	ENSGT00940000157700.d	ENSGT00950000183144.B ##22	ENSGT00940000161195.a.a	ENSGT00940000160152	ENSGT00390000012267	ENSGT00940000155858.e
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	187							ENSGT00940000155004.t.d	ENSGT00720000108861	ENSGT00940000163472.i.a.b.b.a.a.b.b.b.a.a.a.b.b.b	ENSGT00940000155004.t.c	ENSGT00940000157864.a.b.a	ENSGT00940000153578.A.e.b	ENSGT00950000182923.A.`b.a	ENSGT00530000063000.a.a.b.i.a	ENSGT00940000157700.d.w	ENSGT00950000183144.B.bb ##22	ENSGT00940000161195.a.a.c	ENSGT00940000160152	ENSGT00390000012267.i	ENSGT00940000155858.e.b	ENSGT00940000160987.e.b.a.b.a	ENSGT00950000183036.b.f.c.a	ENSGT00940000168611.a	ENSGT00940000154990.fb.b.h	ENSGT00940000177829	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.v.a.b	ENSGT00940000165172.a.c	ENSGT01030000234583.a.a.c.b.a.a.a.b.b.a.a.a.a.a.a.a.a.b.a.a.a.b.a.b.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	50	ENSCARG00000026320	ENSCARG00000026312	MCOLN1 (ENSCARG00000025717)	ENSCARG00000025694	ENSCARG00000025689	jpt1b (ENSCARG00000025675)	ENSCARG00000025661	NUP85 (ENSCARG00000025341)	GGA3 (ENSCARG00000024855)	ENSCARG00000024815	cygb1 (ENSCARG00000024802)	SPHK1 (ENSCARG00000024706)	ENSCARG00000024696	ATG4D (ENSCARG00000024672)	MAST1 (ENSCARG00000022935)	rtbdn (ENSCARG00000036456) ##22	junbb (ENSCARG00000036449)	HOOK2 (ENSCARG00000033609)	trir (ENSCARG00000033422)	ubn2b (ENSCARG00000033359)	ENSCARG00000033330	mmd (ENSCARG00000033280)	hlfa (ENSCARG00000033258)	ENSCARG00000033076	ENSCARG00000033047	ENSCARG00000033039	ENSCARG00000033035	ENSCARG00000033034	ENSCARG00000032983	elac2 (ENSCARG00000032430)	SHISA6 (ENSCARG00000032384)
Goldfish	MODERN SPECIES	50	ENSCARG00000029101	ENSCARG00000029031	plbd1a (ENSCARG00000028639)	pick1 (ENSCARG00000028518)	ENSCARG00000028505	ENSCARG00000028500	ENSCARG00000028479	ENSCARG00000028371	ENSCARG00000028249	cygb1 (ENSCARG00000028224)	SPHK1 (ENSCARG00000028205)	ENSCARG00000028171	ATG4D (ENSCARG00000028161)	MAST1 (ENSCARG00000027125)	ENSCARG00000027061	rtbdn (ENSCARG00000027047) ##22	junbb (ENSCARG00000027041)	ENSCARG00000027035	HOOK2 (ENSCARG00000026534)	trir (ENSCARG00000026472)	ubn2b (ENSCARG00000026351)	ENSCARG00000026335	ENSCARG00000026327	ENSCARG00000026320	ENSCARG00000026312	MCOLN1 (ENSCARG00000025717)	ENSCARG00000025694	ENSCARG00000025689	jpt1b (ENSCARG00000025675)	ENSCARG00000025661	NUP85 (ENSCARG00000025341)
Cyprininae_a	ANCESTRAL SPECIES	310				ENSGT00950000182895.a.a.a.a.b	ENSGT00390000000204.l.b	ENSGT00940000157333.b.c	ENSGT00390000013973.A.a.c.a.g.a.a.a	ENSGT00940000155004.t.d	ENSGT00720000108861	ENSGT00940000157864.a.b.a	ENSGT00940000153578.A.e.b	ENSGT00950000182923.A.`b.a	ENSGT00530000063000.a.a.b.i.a	ENSGT00940000157700.d.w	ENSGT00940000163472.i.a.b.b.a.a.b.b.b.a.a.a.b.b.b	ENSGT00950000183144.B.bb ##22	ENSGT00940000161195.a.a.c	ENSGT00940000160152	ENSGT00390000012267.i	ENSGT00940000155858.e.b	ENSGT00940000160987.e.b.a.b.a	ENSGT00950000183036.b.f.c.a	ENSGT00940000168611.a	ENSGT00940000154990.fb.b.h	ENSGT00530000063861.a	ENSGT00940000156166.b.a.a	ENSGT00940000159311.d.a.a	ENSGT00940000154912.v.a.b	ENSGT00940000165172.a.c	ENSGT01030000234583.a.a.c.b.a.a.a.b.b.a.a.a.a.a.a.a.a.b.a.a.a.b.a.b.b	ENSGT00530000064086.w
Golden-line barbel	MODERN SPECIES	1132											SPHK1 (ENSSGRG00000038462)	ENSSGRG00000038461	ENSSGRG00000038458	ENSSGRG00000038451	MAST1 (ENSSGRG00000038218)	rtbdn (ENSSGRG00000038193) ##22	junbb (ENSSGRG00000038189)	hook2 (ENSSGRG00000037314)	ENSSGRG00000037287	ubn2b (ENSSGRG00000037283)	ENSSGRG00000037282
Common carp reference	MODERN SPECIES	1	HLF (ENSCCRG00000057349)	mmd (ENSCCRG00000028047)	TMEM100 (ENSCCRG00000078509)	ENSCCRG00000082794	PCTP (ENSCCRG00000049126)	CBX2 (ENSCCRG00000073835)	ENSCCRG00000078161	ENSCCRG00000055959	RBFOX3 (ENSCCRG00000036735)	ENSCCRG00000044395	ENSCCRG00000052813	ENSCCRG00000044390	ENSCCRG00000064297	ENSCCRG00000044382	ENSCCRG00000043190	ENSCCRG00000071156 ##22	sumo2b (ENSCCRG00000072018)	ENSCCRG00000076059	ENSCCRG00000039366	cygb1 (ENSCCRG00000074613)	ENSCCRG00000064221	ENSCCRG00000078624	ENSCCRG00000061570	ENSCCRG00000008059	ENSCCRG00000015362	ENSCCRG00000008133	ENSCCRG00000058919	junbb (ENSCCRG00000057802)	ENSCCRG00000082218	ENSCCRG00000011540	ubn2b (ENSCCRG00000010344)
Cyprininae	ANCESTRAL SPECIES	611										ENSGT00940000168137	ENSGT00940000157864.a.b.b	ENSGT00940000153578.A.e.a	ENSGT00950000182923.A.`b.b	ENSGT00530000063000.a.a.b.i.b	ENSGT00940000157700.d.x	ENSGT00950000183144.B.cb ##22	ENSGT00940000161195.a.a.d	ENSGT00390000012267.j	ENSGT00940000155858.e.a	ENSGT00950000183036.b.f.c.b	ENSGT00940000168611.b	ENSGT00940000154990.fb.b.g.a	ENSGT00940000154912.v.a.a	ENSGT00940000165172.a.d	ENSGT01030000234583.a.a.c.b.a.a.a.b.b.a.a.a.a.a.a.a.a.b.a.a.a.b.b.a
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	22	ENSCARG00000001814	ENSCARG00000001808	zgc:136767 (ENSCARG00000001807)	ENSCARG00000001791	jpt1b (ENSCARG00000001764)	sumo2b (ENSCARG00000001736)	NUP85 (ENSCARG00000001651)	GGA3 (ENSCARG00000001418)	ENSCARG00000001336	cygb1 (ENSCARG00000001332)	SPHK1 (ENSCARG00000001318)	ENSCARG00000001310	ENSCARG00000001303	ENSCARG00000001296	MAST1 (ENSCARG00000001290)	rtbdn (ENSCARG00000001283) ##22	junbb (ENSCARG00000001277)	jpt1b (ENSCARG00000001271)	sumo2b (ENSCARG00000001255)	ENSCARG00000001249	GGA3 (ENSCARG00000000990)	ENSCARG00000000907	ENSCARG00000000901	cygb1 (ENSCARG00000000896)	ENSCARG00000000892	ENSCARG00000000883	ENSCARG00000000872	ENSCARG00000000859	ENSCARG00000000848	ENSCARG00000000831	ENSCARG00000000827
Goldfish	MODERN SPECIES	22	zgc:123295 (ENSCARG00000001424)	ENSCARG00000001438	ENSCARG00000001462	CCDC134 (ENSCARG00000001467)	ENSCARG00000001485	ENSCARG00000001515	KDELR3 (ENSCARG00000001520)	KCNJ4 (ENSCARG00000001521)	ENSCARG00000001524	rrp7a (ENSCARG00000000135)	ENSCARG00000000144	ENSCARG00000000152	ENSCARG00000000162	ENSCARG00000000174	GRIN2B (ENSCARG00000000186)	rtbdn (ENSCARG00000000201) ##22	junbb (ENSCARG00000000210)	trir (ENSCARG00000000228)	ubn2b (ENSCARG00000000261)	ENSCARG00000000286	MCOLN1 (ENSCARG00000000299)	ENSCARG00000000322	ENSCARG00000000331	pkn1b (ENSCARG00000000476)	ENSCARG00000000709	ddx39ab (ENSCARG00000000732)	ENSCARG00000000765	ENSCARG00000000784	ENSCARG00000000807	MAST1 (ENSCARG00000000820)	ENSCARG00000000827
Cyprininae_a	ANCESTRAL SPECIES	649										ENSGT00940000168137	ENSGT00940000157864.a.b.b	ENSGT00940000153578.A.e.a	ENSGT00950000182923.A.`b.b	ENSGT00530000063000.a.a.b.i.b	ENSGT00940000157700.d.x	ENSGT00950000183144.B.cb ##22	ENSGT00940000161195.a.a.d
Common carp reference	MODERN SPECIES	3	zgc:136767 (ENSCCRG00000062575)	jpt1b (ENSCCRG00000072501)	ENSCCRG00000038141	ENSCCRG00000038117	ENSCCRG00000037932	ENSCCRG00000062212	cygb1 (ENSCCRG00000082133)	ENSCCRG00000045393	ENSCCRG00000052105	ENSCCRG00000064089	ENSCCRG00000080883	ENSCCRG00000071932	ENSCCRG00000008062	ENSCCRG00000015372	ENSCCRG00000068486	rtbdn (ENSCCRG00000064399) ##22	ENSCCRG00000011830	trir (ENSCCRG00000078765)	ubn2b (ENSCCRG00000011530)	ENSCCRG00000060221	ENSCCRG00000082409	ENSCCRG00000078673	ENSCCRG00000066526	pkn1b (ENSCCRG00000021721)	ENSCCRG00000078792	ddx39ab (ENSCCRG00000080061)	ENSCCRG00000062308	ENSCCRG00000054297	ENSCCRG00000044135	slc25a38a (ENSCCRG00000075945)	ENSCCRG00000068569
Golden-line barbel	MODERN SPECIES	1217																rtbdn (ENSSGRG00000029334) ##22	junbb (ENSSGRG00000029333)	ENSSGRG00000029228	dpysl4 (ENSSGRG00000026350)	ENSSGRG00000026319	KIF5B (ENSSGRG00000023077)	ENSSGRG00000023004	ENSSGRG00000023002	ENSSGRG00000022999	CDH18 (ENSSGRG00000022957)
Zebrafish	MODERN SPECIES	18	ENSDARG00000117076	ENSDARG00000089947	ENSDARG00000115220	ENSDARG00000114108	ENSDARG00000110003	ENSDARG00000091679	ENSDARG00000103530	zgc:173577 (ENSDARG00000098923)	ENSDARG00000094216	zgc:113443 (ENSDARG00000100803)	zgc:173517 (ENSDARG00000102401)	ENSDARG00000102411	ENSDARG00000115857	znf1001 (ENSDARG00000103777)	ENSDARG00000090740	rtbdn (ENSDARG00000103413) ##22	junbb (ENSDARG00000104773)	hook2 (ENSDARG00000099235)	ENSDARG00000039309	trir (ENSDARG00000104178)	ubn2b (ENSDARG00000100508)	trim35-21 (ENSDARG00000102303)	ENSDARG00000101055	trim35-24 (ENSDARG00000099684)	trim35-23 (ENSDARG00000102368)	trim35-22 (ENSDARG00000102264)	ENSDARG00000100721	ENSDARG00000100373	trim35-19 (ENSDARG00000099639)	ENSDARG00000111323	ENSDARG00000105044
Osteoglossiformes	DUPLICATION
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	41	ENSGT00390000012436.g	ENSGT00940000165343	ENSGT00940000166140	ENSGT00940000157140.b.b.b	ENSGT00470000042444	ENSGT00940000161143	ENSGT01050000244887.A.a.a.a.l	ENSGT00940000159543	ENSGT00940000165948	ENSGT00940000159801.B	ENSGT00940000159089	ENSGT00940000154819.a.b.d	ENSGT00940000156887.b	ENSGT00530000063000.a.a.b	ENSGT00940000157700.a	ENSGT00950000183144.B.db.a ##22	ENSGT00390000010768	ENSGT00940000155828	ENSGT00940000161195.a.a.a	ENSGT00940000160152.m	ENSGT00940000161361	ENSGT00390000003817.c	ENSGT00390000012267	ENSGT00940000163721	ENSGT00390000012078.a.b	ENSGT00950000182916.a.b.a.a.a.b.a.b.b	ENSGT00940000177692	ENSGT00950000182916.a.b.a.a.a.b.a.b.a	ENSGT00390000013719	ENSGT00950000182917.a.b.b.g	ENSGT00940000164506.b.b
Asian bonytongue	MODERN SPECIES	12	hmgxb4a (ENSSFOG00015010243)	ENSSFOG00015031199	ENSSFOG00015031783	foxd7 (ENSSFOG00015010194)	ENSSFOG00015010183	fdx2 (ENSSFOG00015030952)	ENSSFOG00015010170	keap1b (ENSSFOG00015010140)	ENSSFOG00015010119	CDKN2D (ENSSFOG00015010093)	ap1m2 (ENSSFOG00015010047)	ENSSFOG00015010040	SMARCA4 (ENSSFOG00015009921)	atg4da (ENSSFOG00015009908)	MAST1 (ENSSFOG00015009789)	rtbdn (ENSSFOG00015009745) ##22	rnaseh2a (ENSSFOG00015009692)	ENSSFOG00015009666	JUNB (ENSSFOG00015031678)	HOOK2 (ENSSFOG00015009620)	BEST2 (ENSSFOG00015009584)	get3 (ENSSFOG00015009554)	TRIR (ENSSFOG00015025754)	rnf11a (ENSSFOG00015009524)	rad23aa (ENSSFOG00015009506)	ENSSFOG00015028565	nfixb (ENSSFOG00015009407)	dand5 (ENSSFOG00015009362)	ENSSFOG00015009317	ENSSFOG00015009288	ENSSFOG00015009276
P. kingsleyae	MODERN SPECIES	45	hmgxb4a (ENSPKIG00000010496)	ENSPKIG00000010465	ENSPKIG00000010456	ENSPKIG00000010442	zglp1 (ENSPKIG00000010420)	fdx2 (ENSPKIG00000010398)	ENSPKIG00000010381	keap1b (ENSPKIG00000010365)	ENSPKIG00000010349	CDKN2D (ENSPKIG00000010335)	ap1m2 (ENSPKIG00000010279)	ENSPKIG00000010225	SMARCA4 (ENSPKIG00000010087)	atg4da (ENSPKIG00000010015)	MAST1 (ENSPKIG00000009888)	rtbdn (ENSPKIG00000009782) ##22	rnaseh2a (ENSPKIG00000009756)	PRDX2 (ENSPKIG00000009726)	JUNB (ENSPKIG00000009704)	HOOK2 (ENSPKIG00000009652)	BEST2 (ENSPKIG00000009609)	get3 (ENSPKIG00000009567)	TRIR (ENSPKIG00000009548)	rnf11a (ENSPKIG00000009428)	rad23aa (ENSPKIG00000009389)	nfixb (ENSPKIG00000009239)	dand5 (ENSPKIG00000009143)	ENSPKIG00000009117	epor (ENSPKIG00000009064)	rab3da (ENSPKIG00000009021)	pld6 (ENSPKIG00000009005)
Osteoglossiformes	ANCESTRAL SPECIES	64	ENSGT00710000107036.a.a	ENSGT00940000155774.b	ENSGT00940000156865.b	ENSGT00940000155729	ENSGT01050000244824.G	ENSGT00640000091519	ENSGT00940000157805	ENSGT00940000157140.b.b.a	ENSGT01050000244887.A.a.a.a.k	ENSGT00390000005584	ENSGT00390000005605	ENSGT00940000154819.a.b.c.a	ENSGT00940000156887.a	ENSGT00950000182923.A.s	ENSGT00940000157700.b	ENSGT00950000183144.B.db.b ##22	ENSGT00940000154277.b.b.b	ENSGT00940000161195.a.a.b	ENSGT00940000160152.n	ENSGT00390000003817.d
Asian bonytongue	MODERN SPECIES	18	ENSSFOG00015027877	ddx47 (ENSSFOG00015013392)	gcat (ENSSFOG00015013409)	ENSSFOG00015013478	mcm5 (ENSSFOG00015013517)	foxred2 (ENSSFOG00015013582)	ENSSFOG00015013623	S1PR5 (ENSSFOG00015024243)	spc24 (ENSSFOG00015013634)	kri1 (ENSSFOG00015013646)	CDKN2D (ENSSFOG00015032731)	ldlra (ENSSFOG00015013750)	smarca4a (ENSSFOG00015013823)	ENSSFOG00015013947	MAST1 (ENSSFOG00015013958)	rtbdn (ENSSFOG00015014018) ##22	ENSSFOG00015014054	junbb (ENSSFOG00015009655)	HOOK2 (ENSSFOG00015014239)	get3 (ENSSFOG00015027208)	trir (ENSSFOG00015028164)	nfixb (ENSSFOG00015014321)	GADD45GIP1 (ENSSFOG00015024648)	zgc:158403 (ENSSFOG00015014474)	dhps (ENSSFOG00015028198)	ENSSFOG00015014503	tspan35 (ENSSFOG00015014521)	ZNF653 (ENSSFOG00015014543)	ENSSFOG00015014555	epor (ENSSFOG00015030139)	rab3db (ENSSFOG00015026404)
Osteoglossiformes	ANCESTRAL SPECIES	5	ENSGT01100000263662	ENSGT00530000063347.A.b.l	ENSGT00390000007600	ENSGT00390000017123.a	ENSGT00940000159251	ENSGT00950000182879.a.b.a.a.b.a	ENSGT00950000182879.a.b.a.a.b.b.b.b	ENSGT00950000182879.a.b.b.u	ENSGT00990000205848	ENSGT00950000182879.a.a	ENSGT00950000182879.b	ENSGT00530000063632.A	ENSGT00940000158851.b	ENSGT00940000156259.a.a.e	ENSGT00940000155705.b.a	ENSGT00950000183144.B.eb ##22	ENSGT00390000016650.c.a.g	ENSGT00940000156539	ENSGT00940000154277.a.c.b	ENSGT00940000163309	ENSGT00390000002659	ENSGT01020000230412.A.c.b.c.a.a	ENSGT00390000003156.b.c	ENSGT01060000248556.B.q	ENSGT00940000160740	ENSGT00940000156073.c.b	ENSGT00940000161304	ENSGT00940000159127	ENSGT00940000156988	ENSGT00730000111085.A	ENSGT00530000063498.B
P. kingsleyae	MODERN SPECIES	5	hook1 (ENSPKIG00000010275)	cyp2n13 (ENSPKIG00000010353)	ENSPKIG00000010373	ENSPKIG00000010391	ENSPKIG00000010422	ENSPKIG00000010472	ENSPKIG00000010530	ENSPKIG00000010553	ENSPKIG00000010572	cyp2aa8 (ENSPKIG00000010593)	ENSPKIG00000010617	pomgnt1 (ENSPKIG00000010659)	TSPAN1 (ENSPKIG00000010755)	PIK3R3 (ENSPKIG00000010834)	MAST2 (ENSPKIG00000010952)	ENSPKIG00000011003 ##22	GPBP1L1 (ENSPKIG00000011031)	nasp (ENSPKIG00000011084)	PRDX1 (ENSPKIG00000011147)	aldh9a1a.1 (ENSPKIG00000011195)	tmco1 (ENSPKIG00000011236)	uck2a (ENSPKIG00000011255)	magoh (ENSPKIG00000011331)	cpt2 (ENSPKIG00000011296)	PODN (ENSPKIG00000011351)	slc1a7b (ENSPKIG00000011379)	SHISAL2A (ENSPKIG00000011398)	gpx7 (ENSPKIG00000011422)	prpf38a (ENSPKIG00000011439)	orc1 (ENSPKIG00000011491)	mpl (ENSPKIG00000011598)
Asian bonytongue	MODERN SPECIES	24	ENSSFOG00015027008	ENSSFOG00015020461	ENSSFOG00015025359	ENSSFOG00015032711	ENSSFOG00015022050	ENSSFOG00015022062	pomgnt1 (ENSSFOG00015022074)	TSPAN1 (ENSSFOG00015029719)	ENSSFOG00015033132	ENSSFOG00015030041	ENSSFOG00015031373	pomgnt1 (ENSSFOG00015030963)	TSPAN1 (ENSSFOG00015025147)	PIK3R3 (ENSSFOG00015022151)	MAST2 (ENSSFOG00015022185)	ENSSFOG00015022211 ##22	GPBP1L1 (ENSSFOG00015022225)	nasp (ENSSFOG00015022246)	akr1a1b (ENSSFOG00015022288)	PRDX1 (ENSSFOG00015022297)	aldh9a1a.1 (ENSSFOG00015022323)	uck2a (ENSSFOG00015027960)	tmco1 (ENSSFOG00015022384)	magoh (ENSSFOG00015022407)	cpt2 (ENSSFOG00015022430)	PODN (ENSSFOG00015022474)	slc1a7b (ENSSFOG00015022481)	SHISAL2A (ENSSFOG00015022496)	gpx7 (ENSSFOG00015022500)	orc1 (ENSSFOG00015022510)	mpl (ENSSFOG00015022525)
Spotted gar	DUPLICATION
Spotted gar	MODERN SPECIES	648	DNAI3 (ENSLOCG00000005471)	MCOLN3 (ENSLOCG00000005502)	mcoln2 (ENSLOCG00000005533)	LPAR3 (ENSLOCG00000005571)	ENSLOCG00000005586	ssx2ipa (ENSLOCG00000005611)	ENSLOCG00000005628	ENSLOCG00000005652	ENSLOCG00000005669	lurap1 (ENSLOCG00000005689)	pomgnt1 (ENSLOCG00000005707)	TSPAN1 (ENSLOCG00000005739)	PIK3R3 (ENSLOCG00000005759)	MAST2 (ENSLOCG00000005784)	ENSLOCG00000005801	ENSLOCG00000005820 ##22	IPP (ENSLOCG00000005843)	tmem69 (ENSLOCG00000005866)	GPBP1L1 (ENSLOCG00000005900)	ENSLOCG00000005921	nasp (ENSLOCG00000005955)	akr1a1b (ENSLOCG00000005983)	prdx1 (ENSLOCG00000006005)	ENSLOCG00000006033	aldh9a1a.1 (ENSLOCG00000006045)	tmco1 (ENSLOCG00000006070)	uck2a (ENSLOCG00000006084)	magoh (ENSLOCG00000006104)	czib (ENSLOCG00000006123)	cpt2 (ENSLOCG00000006146)	SCP2 (ENSLOCG00000006164)
Spotted gar	MODERN SPECIES	672	ecsit (ENSLOCG00000007679)	foxd7 (ENSLOCG00000018295)	ENSLOCG00000007686	fdx2 (ENSLOCG00000007698)	s1pr5b (ENSLOCG00000018296)	keap1b (ENSLOCG00000007721)	spc24 (ENSLOCG00000007731)	ENSLOCG00000007742	kri1 (ENSLOCG00000007754)	CDKN2D (ENSLOCG00000007768)	ap1m2 (ENSLOCG00000007782)	LDLR (ENSLOCG00000007795)	smarca4a (ENSLOCG00000007820)	atg4da (ENSLOCG00000007842)	MAST1 (ENSLOCG00000007853)	rtbdn (ENSLOCG00000007879) ##22	rnaseh2a (ENSLOCG00000007890)	prdx2 (ENSLOCG00000007904)	junbb (ENSLOCG00000018297)	hook2 (ENSLOCG00000007916)	BEST2 (ENSLOCG00000007943)	get3 (ENSLOCG00000007957)	trir (ENSLOCG00000007974)	rad23aa (ENSLOCG00000007980)	nfixb (ENSLOCG00000007997)	ENSLOCG00000008013	ENSLOCG00000008024	zgc:158403 (ENSLOCG00000008037)	ENSLOCG00000008063	tspan35 (ENSLOCG00000008073)	ZNF653 (ENSLOCG00000008078)
Reedfish	DUPLICATION
Reedfish	MODERN SPECIES	1	ENSECRG00000017799	ENSECRG00000019799	ENSECRG00000019817	ENSECRG00000019927	ENSECRG00000020984	ENSECRG00000021012	ENSECRG00000021045	cyp2v1 (ENSECRG00000021263)	ENSECRG00000021479	ENSECRG00000021576	lurap1 (ENSECRG00000021602)	pomgnt1 (ENSECRG00000021615)	TSPAN1 (ENSECRG00000021630)	pik3r3b (ENSECRG00000021645)	MAST2 (ENSECRG00000021663)	ENSECRG00000021696 ##22	IPP (ENSECRG00000021711)	tmem69 (ENSECRG00000021727)	GPBP1L1 (ENSECRG00000021742)	ENSECRG00000021772	ENSECRG00000021779	ENSECRG00000021791	ENSECRG00000021798	ENSECRG00000021804	ENSECRG00000021811	ENSECRG00000021818	ENSECRG00000021825	ENSECRG00000021834	ENSECRG00000021842	ENSECRG00000021847	ENSECRG00000021854
Reedfish	MODERN SPECIES	8	tmem205 (ENSECRG00000022157)	pld6 (ENSECRG00000022167)	rab3db (ENSECRG00000022173)	epor (ENSECRG00000022187)	ENSECRG00000022202	tspan35 (ENSECRG00000022210)	nfixb (ENSECRG00000022267)	LDLR (ENSECRG00000022353)	smarca4a (ENSECRG00000022404)	ap1m2 (ENSECRG00000022504)	CDKN2D (ENSECRG00000022521)	kri1 (ENSECRG00000022529)	ENSECRG00000022550	atg4da (ENSECRG00000022566)	MAST1 (ENSECRG00000022588)	rtbdn (ENSECRG00000016742) ##22	rnaseh2a (ENSECRG00000016753)	PRDX2 (ENSECRG00000016770)	junba (ENSECRG00000016788)	hook2 (ENSECRG00000016806)	BEST2 (ENSECRG00000016838)	get3 (ENSECRG00000016877)	trir (ENSECRG00000016949)	rnf11a (ENSECRG00000016960)	rad23aa (ENSECRG00000016975)	ENSECRG00000017009	ENSECRG00000017071	ENSECRG00000017081	kank2 (ENSECRG00000017107)	DOCK6 (ENSECRG00000017288)	elavl3 (ENSECRG00000018117)
Ciona	ANCESTRAL SPECIES																	ENSGT00950000183144.B ##22
Ciona savignyi	MODERN SPECIES	334	ENSCSAVG00000000551	ENSCSAVG00000000553	ENSCSAVG00000000554	ENSCSAVG00000000555	ENSCSAVG00000000557	ENSCSAVG00000000558	ENSCSAVG00000000560	ENSCSAVG00000000628	ENSCSAVG00000000631	ENSCSAVG00000000632	ENSCSAVG00000000633	ENSCSAVG00000000634	ENSCSAVG00000000663	ENSCSAVG00000000672	ENSCSAVG00000000715	ENSCSAVG00000000787 ##22	ENSCSAVG00000000789	ENSCSAVG00000000791	ENSCSAVG00000000795	ENSCSAVG00000000811	ENSCSAVG00000000812	ENSCSAVG00000000813	ENSCSAVG00000000816	ENSCSAVG00000000820	ENSCSAVG00000000823	ENSCSAVG00000000825	ENSCSAVG00000000828	ENSCSAVG00000000837	ENSCSAVG00000000857	ENSCSAVG00000000859	ENSCSAVG00000000866
Ciona intestinalis	MODERN SPECIES	9	ENSCING00000009641	ENSCING00000019772	ENSCING00000018997	ENSCING00000022156	ENSCING00000019995	ENSCING00000023898	ENSCING00000021905	ENSCING00000009647	ENSCING00000009646	ENSCING00000009645	ENSCING00000009644	ENSCING00000010034	ENSCING00000022207	ENSCING00000022609	ENSCING00000009648	ENSCING00000012300 ##22	ENSCING00000009655	ENSCING00000009654	ENSCING00000012299	ENSCING00000021646	ENSCING00000009652	ENSCING00000021259	ENSCING00000009651	ENSCING00000009650	ENSCING00000012298	ENSCING00000009649	ENSCING00000021674	ENSCING00000023793	ENSCING00000009657	ENSCING00000018652	ENSCING00000019294