Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES 102 ENSGT00940000162796 ENSGT00940000165849 ENSGT00940000157197 ENSGT00940000160186 ENSGT00910000144291 ENSGT00390000003426 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00390000013163 #9 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00730000111972 ENSGT00950000183137.b.b #22 Euteleostomi ANCESTRAL SPECIES 140 ENSGT00950000183175.B.a ENSGT00940000162796 ENSGT00940000165849 ENSGT00940000161160 ENSGT00940000158553.b.b ENSGT00940000157197 ENSGT00940000160186 ENSGT00910000144291 ENSGT00390000000537 ENSGT00940000153451.a.a.b ENSGT00940000158129 ENSGT00390000013163 #9 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 Sarcopterygii ANCESTRAL SPECIES 47 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 Tetrapoda ANCESTRAL SPECIES 29 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00940000158761 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00940000153451.a.a.b ENSGT00390000000537 ENSGT00940000160017 ENSGT00390000003426 ENSGT00910000144291 ENSGT00940000160186 ENSGT00940000157197 ENSGT00940000158553.b.b Amniota ANCESTRAL SPECIES 17 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00940000158761 ENSGT00950000182938.b.a ENSGT00940000158129 ENSGT00940000153451.a.a.b ENSGT00390000000537 ENSGT00940000160017 ENSGT00390000003426 ENSGT00910000144291 ENSGT00940000160186 ENSGT00940000157197 ENSGT00940000158553.b.b Mammalia ANCESTRAL SPECIES 30 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00900000141664 ENSGT00530000064225 ENSGT00520000060726 ENSGT00940000158761 ENSGT00950000182938.b.a ENSGT00940000158129 ENSGT00940000153451.a.a.b ENSGT00390000000537 ENSGT00940000160017 ENSGT00390000003426 ENSGT00910000144291 Theria ANCESTRAL SPECIES 18 ENSGT00900000141664 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000159769.a.b ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703 #36 ENSGT00940000157857 Eutheria ANCESTRAL SPECIES 6 ENSGT00900000141664 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000159769.a.b ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703 #36 ENSGT00940000157857 Boreoeutheria ANCESTRAL SPECIES 9 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000159769.a.b ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 Euarchontoglires ANCESTRAL SPECIES 8 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 Primates ANCESTRAL SPECIES 8 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00390000000703.g.b ##36 Haplorrhini ANCESTRAL SPECIES 4 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.g.b ##36 ENSGT00940000157857 Simiiformes ANCESTRAL SPECIES 6 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.g.b ##36 ENSGT00940000157857 Platyrrhini ANCESTRAL SPECIES 7 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.g.a.a.b ##36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Cebidae ANCESTRAL SPECIES 6 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.g.a.a.b ##36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Marmoset MODERN SPECIES 11 SPINK7 (ENSCJAG00000021238) #7 SPINK9 (ENSCJAG00000021232) #8 FBXO38 (ENSCJAG00000021201) #9 HTR4 (ENSCJAG00000021192) #10 ADRB2 (ENSCJAG00000046663) #11 SH3TC2 (ENSCJAG00000021183) #12 ABLIM3 (ENSCJAG00000021152) #13 ENSCJAG00000069995 #14 AFAP1L1 (ENSCJAG00000021140) #15 PCYOX1L (ENSCJAG00000021137) #16 IL17B (ENSCJAG00000021136) #17 ENSCJAG00000073579 #18 CSNK1A1 (ENSCJAG00000021121) #19 ARHGEF37 (ENSCJAG00000021116) #20 ENSCJAG00000073211 #21 PPARGC1B (ENSCJAG00000021113) #22 PDE6A (ENSCJAG00000021102) #23 ENSCJAG00000076698 #24 SLC26A2 (ENSCJAG00000021099) #25 HMGXB3 (ENSCJAG00000021088) #26 CSF1R (ENSCJAG00000021077) #27 PDGFRB (ENSCJAG00000021070) #28 ENSCJAG00000080616 #29 CDX1 (ENSCJAG00000021069) #30 SLC6A7 (ENSCJAG00000021053) #31 CAMK2A (ENSCJAG00000021031) #32 ARSI (ENSCJAG00000047946) #33 TCOF1 (ENSCJAG00000020993) #34 CD74 (ENSCJAG00000038854) #35 ENSCJAG00000020981 #36 ENSCJAG00000080077 #37 Cebidae_a ANCESTRAL SPECIES 83 ENSGT00740000116871 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.g.a.a.b ##36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Capuchin MODERN SPECIES 71 ENSCCAG00000036330 ENSCCAG00000031419 SPINK7 (ENSCCAG00000024710) #7 SPINK9 (ENSCCAG00000022106) #8 FBXO38 (ENSCCAG00000033302) #9 HTR4 (ENSCCAG00000033464) #10 ADRB2 (ENSCCAG00000027966) #11 SH3TC2 (ENSCCAG00000037468) #12 ABLIM3 (ENSCCAG00000033452) #13 AFAP1L1 (ENSCCAG00000037827) #15 GRPEL2 (ENSCCAG00000030877) PCYOX1L (ENSCCAG00000031959) #16 IL17B (ENSCCAG00000037576) #17 CSNK1A1 (ENSCCAG00000036479) #19 ARHGEF37 (ENSCCAG00000035607) #20 PPARGC1B (ENSCCAG00000026909) #22 PDE6A (ENSCCAG00000037978) #23 SLC26A2 (ENSCCAG00000020161) #25 ENSCCAG00000030622 HMGXB3 (ENSCCAG00000023989) #26 CSF1R (ENSCCAG00000033803) #27 ENSCCAG00000026641 PDGFRB (ENSCCAG00000031575) #28 CDX1 (ENSCCAG00000029914) #30 SLC6A7 (ENSCCAG00000033881) #31 CAMK2A (ENSCCAG00000029738) #32 ENSCCAG00000023659 ENSCCAG00000020087 CNNM1 (ENSCCAG00000037324) GOT1 (ENSCCAG00000036234) NKX2-3 (ENSCCAG00000028510) Bolivian squirrel monkey MODERN SPECIES 103 MARCOL (ENSSBOG00000032171) SPINK7 (ENSSBOG00000034263) #7 SPINK9 (ENSSBOG00000021252) #8 FBXO38 (ENSSBOG00000029557) #9 HTR4 (ENSSBOG00000029448) #10 ADRB2 (ENSSBOG00000020834) #11 SH3TC2 (ENSSBOG00000019392) #12 ABLIM3 (ENSSBOG00000031658) #13 AFAP1L1 (ENSSBOG00000031006) #15 GRPEL2 (ENSSBOG00000030736) PCYOX1L (ENSSBOG00000029897) #16 IL17B (ENSSBOG00000027325) #17 CSNK1A1 (ENSSBOG00000025117) #19 ENSSBOG00000026169 ARHGEF37 (ENSSBOG00000028328) #20 PPARGC1B (ENSSBOG00000028738) #22 PDE6A (ENSSBOG00000021337) #23 SLC26A2 (ENSSBOG00000031044) #25 TIGD6 (ENSSBOG00000032889) HMGXB3 (ENSSBOG00000020648) #26 CSF1R (ENSSBOG00000023982) #27 PDGFRB (ENSSBOG00000025037) #28 ENSSBOG00000030617 #30 SLC6A7 (ENSSBOG00000018069) #31 CAMK2A (ENSSBOG00000025496) #32 ARSI (ENSSBOG00000025544) #33 TCOF1 (ENSSBOG00000026594) #34 CD74 (ENSSBOG00000024664) #35 ENSSBOG00000028782 ##36 NDST1 (ENSSBOG00000018856) SYNPO (ENSSBOG00000025452) Mas night monkey MODERN SPECIES 966 SPINK7 (ENSANAG00000024041) #7 ENSANAG00000037965 SPINK9 (ENSANAG00000017436) #8 FBXO38 (ENSANAG00000025070) #9 HTR4 (ENSANAG00000016946) #10 ADRB2 (ENSANAG00000025525) #11 SH3TC2 (ENSANAG00000019462) #12 ENSANAG00000026413 ABLIM3 (ENSANAG00000036878) #13 AFAP1L1 (ENSANAG00000024427) #15 GRPEL2 (ENSANAG00000030295) PCYOX1L (ENSANAG00000020560) #16 IL17B (ENSANAG00000020790) #17 CSNK1A1 (ENSANAG00000021098) #19 ARHGEF37 (ENSANAG00000025504) #20 PPARGC1B (ENSANAG00000021830) #22 PDE6A (ENSANAG00000035251) #23 SLC26A2 (ENSANAG00000024045) #25 TIGD6 (ENSANAG00000023656) HMGXB3 (ENSANAG00000021091) #26 CSF1R (ENSANAG00000028025) #27 ENSANAG00000027390 PDGFRB (ENSANAG00000036549) #28 CDX1 (ENSANAG00000022954) #30 SLC6A7 (ENSANAG00000021354) #31 CAMK2A (ENSANAG00000021986) #32 ARSI (ENSANAG00000035477) #33 TCOF1 (ENSANAG00000027583) #34 CD74 (ENSANAG00000024731) #35 ENSANAG00000024272 ENSANAG00000023796 ##36 Catarrhini ANCESTRAL SPECIES 7 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00860000136176 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.g.b ##36 Cercopithecidae ANCESTRAL SPECIES 5 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00860000136176 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.g.b ##36 Cercopithecinae ANCESTRAL SPECIES 9 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00860000136176 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.g.b ##36 Cercopithecinae_a ANCESTRAL SPECIES 9 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.a ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00860000136176 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.g.b ##36 Cercopithecinae_b ANCESTRAL SPECIES 4 ENSGT00740000116871 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.a ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00860000136176 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00910000147883 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.g.b ##36 Olive baboon MODERN SPECIES 15 SPINK14 (ENSPANG00000024863) SPINK6 (ENSPANG00000007464) SPINK7 (ENSPANG00000012115) #7 SPINK9 (ENSPANG00000008614) #8 FBXO38 (ENSPANG00000026422) #9 HTR4 (ENSPANG00000017118) #10 ADRB2 (ENSPANG00000025700) #11 SH3TC2 (ENSPANG00000012855) #12 ABLIM3 (ENSPANG00000012205) #13 AFAP1L1 (ENSPANG00000024862) #15 GRPEL2 (ENSPANG00000013468) PCYOX1L (ENSPANG00000005731) #16 IL17B (ENSPANG00000010657) #17 CSNK1A1 (ENSPANG00000010406) #19 ARHGEF37 (ENSPANG00000013089) #20 PPARGC1B (ENSPANG00000009512) #22 PDE6A (ENSPANG00000019517) #23 SLC26A2 (ENSPANG00000008875) #25 TIGD6 (ENSPANG00000023729) HMGXB3 (ENSPANG00000023318) #26 CSF1R (ENSPANG00000018729) #27 PDGFRB (ENSPANG00000023735) #28 CDX1 (ENSPANG00000050127) #30 SLC6A7 (ENSPANG00000006208) #31 CAMK2A (ENSPANG00000013259) #32 CD74 (ENSPANG00000003593) #35 ARSI (ENSPANG00000013185) #33 TCOF1 (ENSPANG00000021403) #34 RPS14 (ENSPANG00000011660) ##36 NDST1 (ENSPANG00000010405) SYNPO (ENSPANG00000008125) Cercopithecinae_d ANCESTRAL SPECIES 90 ENSGT00740000116871 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.a ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00860000136176 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00390000011010.b.mb ENSGT00940000157138 #28 ENSGT00910000147883 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 Drill MODERN SPECIES 921 SPINK13 (ENSMLEG00000041668) SPINK7 (ENSMLEG00000011759) #7 SPINK9 (ENSMLEG00000043753) #8 FBXO38 (ENSMLEG00000043874) #9 HTR4 (ENSMLEG00000032925) #10 ADRB2 (ENSMLEG00000013549) #11 SH3TC2 (ENSMLEG00000039672) #12 ABLIM3 (ENSMLEG00000035568) #13 AFAP1L1 (ENSMLEG00000036743) #15 GRPEL2 (ENSMLEG00000027712) PCYOX1L (ENSMLEG00000029797) #16 IL17B (ENSMLEG00000029463) #17 CSNK1A1 (ENSMLEG00000032054) #19 ARHGEF37 (ENSMLEG00000008241) #20 PPARGC1B (ENSMLEG00000040973) #22 PDE6A (ENSMLEG00000035530) #23 SLC26A2 (ENSMLEG00000026088) #25 ENSMLEG00000036295 TIGD6 (ENSMLEG00000000354) HMGXB3 (ENSMLEG00000043365) #26 CSF1R (ENSMLEG00000038866) #27 ENSMLEG00000031129 PDGFRB (ENSMLEG00000019760) #28 ENSMLEG00000027551 ENSMLEG00000036186 #30 SLC6A7 (ENSMLEG00000040929) #31 CAMK2A (ENSMLEG00000040131) #32 ARSI (ENSMLEG00000039581) #33 TCOF1 (ENSMLEG00000035580) #34 CD74 (ENSMLEG00000035018) #35 Sooty mangabey MODERN SPECIES 150 MARCOL (ENSCATG00000041443) SPINK13 (ENSCATG00000033181) SPINK7 (ENSCATG00000031455) #7 SPINK9 (ENSCATG00000036099) #8 FBXO38 (ENSCATG00000008057) #9 HTR4 (ENSCATG00000035093) #10 ADRB2 (ENSCATG00000023186) #11 SH3TC2 (ENSCATG00000036976) #12 ABLIM3 (ENSCATG00000025886) #13 AFAP1L1 (ENSCATG00000029104) #15 ENSCATG00000040029 PCYOX1L (ENSCATG00000032100) #16 IL17B (ENSCATG00000031837) #17 CSNK1A1 (ENSCATG00000034093) #19 ARHGEF37 (ENSCATG00000044070) #20 PPARGC1B (ENSCATG00000030402) #22 PDE6A (ENSCATG00000022091) #23 SLC26A2 (ENSCATG00000016803) #25 ENSCATG00000030068 TIGD6 (ENSCATG00000017990) HMGXB3 (ENSCATG00000038002) #26 CSF1R (ENSCATG00000007348) #27 ENSCATG00000045226 PDGFRB (ENSCATG00000044827) #28 CDX1 (ENSCATG00000040987) #30 SLC6A7 (ENSCATG00000034837) #31 CAMK2A (ENSCATG00000035164) #32 ARSI (ENSCATG00000035397) #33 TCOF1 (ENSCATG00000032047) #34 CD74 (ENSCATG00000041658) #35 RPS14 (ENSCATG00000032281) ##36 Macaca ANCESTRAL SPECIES 7 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.a ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00860000136176 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.h.b #36 Pig-tailed macaque MODERN SPECIES 383 SPINK13 (ENSMNEG00000028624) SPINK7 (ENSMNEG00000041021) #7 SPINK9 (ENSMNEG00000034418) #8 FBXO38 (ENSMNEG00000033470) #9 HTR4 (ENSMNEG00000035428) #10 ADRB2 (ENSMNEG00000002108) #11 SH3TC2 (ENSMNEG00000018695) #12 ABLIM3 (ENSMNEG00000043657) #13 AFAP1L1 (ENSMNEG00000022071) #15 ENSMNEG00000040561 PCYOX1L (ENSMNEG00000034433) #16 IL17B (ENSMNEG00000003168) #17 ENSMNEG00000036052 CSNK1A1 (ENSMNEG00000036153) #19 ARHGEF37 (ENSMNEG00000035164) #20 PPARGC1B (ENSMNEG00000034121) #22 PDE6A (ENSMNEG00000043885) #23 SLC26A2 (ENSMNEG00000028522) #25 ENSMNEG00000045322 TIGD6 (ENSMNEG00000028353) HMGXB3 (ENSMNEG00000035203) #26 CSF1R (ENSMNEG00000041139) #27 ENSMNEG00000031925 PDGFRB (ENSMNEG00000033412) #28 ENSMNEG00000040737 CDX1 (ENSMNEG00000030411) #30 SLC6A7 (ENSMNEG00000024157) #31 CAMK2A (ENSMNEG00000044336) #32 ARSI (ENSMNEG00000039468) #33 TCOF1 (ENSMNEG00000037911) #34 CD74 (ENSMNEG00000036530) #35 Macaca_a ANCESTRAL SPECIES 8 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.a ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT01030000239693 ENSGT00940000164709.a.b.b.a.a.b.b.b.b.a.b.b.c.a.a.b ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00940000161627.a.a.a.b.b.b.b.a.a.a.a.a.a.a.b.b.a.a.a.a.b ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.h.b #36 ENSGT00950000183054.a.a.b Crab-eating macaque MODERN SPECIES 16 SPINK7 (ENSMFAG00000053265) #7 SPINK9 (ENSMFAG00000044805) #8 FBXO38 (ENSMFAG00000045852) #9 HTR4 (ENSMFAG00000043212) #10 ADRB2 (ENSMFAG00000021322) #11 SH3TC2 (ENSMFAG00000001106) #12 AFAP1L1 (ENSMFAG00000044334) #15 GRPEL2 (ENSMFAG00000044538) PCYOX1L (ENSMFAG00000039773) #16 IL17B (ENSMFAG00000030082) #17 ENSMFAG00000063962 ENSMFAG00000054852 CSNK1A1 (ENSMFAG00000030995) #19 ENSMFAG00000062100 ARHGEF37 (ENSMFAG00000040761) #20 PPARGC1B (ENSMFAG00000042269) #22 PDE6A (ENSMFAG00000039234) #23 SLC26A2 (ENSMFAG00000042946) #25 TIGD6 (ENSMFAG00000028440) HMGXB3 (ENSMFAG00000041979) #26 CSF1R (ENSMFAG00000034429) #27 PDGFRB (ENSMFAG00000001633) #28 CDX1 (ENSMFAG00000053823) #30 SLC6A7 (ENSMFAG00000039840) #31 CAMK2A (ENSMFAG00000004062) #32 ENSMFAG00000053308 TCOF1 (ENSMFAG00000041830) #34 CD74 (ENSMFAG00000042836) #35 ENSMFAG00000039531 #36 SYNPO (ENSMFAG00000031848) MYOZ3 (ENSMFAG00000035709) Rhesus MODERN SPECIES 16 SPINK9 (ENSMMUG00000029782) #8 FBXO38 (ENSMMUG00000016908) #9 HTR4 (ENSMMUG00000016913) #10 ADRB2 (ENSMMUG00000002214) #11 SH3TC2 (ENSMMUG00000019820) #12 ABLIM3 (ENSMMUG00000021657) #13 AFAP1L1 (ENSMMUG00000021660) #15 GRPEL2 (ENSMMUG00000059111) PCYOX1L (ENSMMUG00000021663) #16 IL17B (ENSMMUG00000021666) #17 ENSMMUG00000062594 ENSMMUG00000063983 CSNK1A1 (ENSMMUG00000001758) #19 ENSMMUG00000053973 ARHGEF37 (ENSMMUG00000017714) #20 PPARGC1B (ENSMMUG00000004749) #22 PDE6A (ENSMMUG00000004752) #23 SLC26A2 (ENSMMUG00000029776) #25 TIGD6 (ENSMMUG00000011553) HMGXB3 (ENSMMUG00000011554) #26 CSF1R (ENSMMUG00000011556) #27 PDGFRB (ENSMMUG00000011557) #28 CDX1 (ENSMMUG00000050352) #30 SLC6A7 (ENSMMUG00000011559) #31 CAMK2A (ENSMMUG00000011563) #32 ARSI (ENSMMUG00000011565) #33 ENSMMUG00000052015 TCOF1 (ENSMMUG00000009111) #34 CD74 (ENSMMUG00000009113) #35 RPS14 (ENSMMUG00000002848) #36 NDST1 (ENSMMUG00000005414) Vervet Monkey MODERN SPECIES 15 SPINK6 (ENSCSAG00000011920) SPINK13 (ENSCSAG00000011916) SPINK7 (ENSCSAG00000011911) #7 SPINK9 (ENSCSAG00000011905) #8 FBXO38 (ENSCSAG00000011896) #9 HTR4 (ENSCSAG00000011878) #10 ADRB2 (ENSCSAG00000019717) #11 ENSCSAG00000011867 #12 ABLIM3 (ENSCSAG00000011859) #13 AFAP1L1 (ENSCSAG00000011843) #15 ENSCSAG00000011834 PCYOX1L (ENSCSAG00000011829) #16 IL17B (ENSCSAG00000011821) #17 CSNK1A1 (ENSCSAG00000011814) #19 ARHGEF37 (ENSCSAG00000011804) #20 PPARGC1B (ENSCSAG00000011792) #22 PDE6A (ENSCSAG00000011757) #23 SLC26A2 (ENSCSAG00000011710) #25 TIGD6 (ENSCSAG00000019718) HMGXB3 (ENSCSAG00000011700) #26 CSF1R (ENSCSAG00000011690) #27 PDGFRB (ENSCSAG00000011671) #28 CDX1 (ENSCSAG00000011659) #30 SLC6A7 (ENSCSAG00000011636) #31 CAMK2A (ENSCSAG00000011585) #32 ARSI (ENSCSAG00000011574) #33 TCOF1 (ENSCSAG00000011564) #34 CD74 (ENSCSAG00000011542) #35 RPS14 (ENSCSAG00000011534) ##36 NDST1 (ENSCSAG00000011472) SYNPO (ENSCSAG00000011415) Rhinopithecus ANCESTRAL SPECIES 53 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330.b #23 ENSGT00940000161330.a #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00860000136176 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00910000147883 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 Black snub-nosed monkey MODERN SPECIES 531 SPINK7 (ENSRBIG00000042503) #7 SPINK9 (ENSRBIG00000033013) #8 FBXO38 (ENSRBIG00000034304) #9 HTR4 (ENSRBIG00000042388) #10 ADRB2 (ENSRBIG00000044505) #11 SH3TC2 (ENSRBIG00000032968) #12 ABLIM3 (ENSRBIG00000027319) #13 AFAP1L1 (ENSRBIG00000024173) #15 GRPEL2 (ENSRBIG00000034866) PCYOX1L (ENSRBIG00000035607) #16 IL17B (ENSRBIG00000037794) #17 ENSRBIG00000015114 ENSRBIG00000043370 CSNK1A1 (ENSRBIG00000032845) #19 ARHGEF37 (ENSRBIG00000005435) #20 PPARGC1B (ENSRBIG00000036724) #22 PDE6A (ENSRBIG00000038805) #23 SLC26A2 (ENSRBIG00000016061) #25 ENSRBIG00000029871 TIGD6 (ENSRBIG00000023892) HMGXB3 (ENSRBIG00000040563) #26 CSF1R (ENSRBIG00000031321) #27 PDGFRB (ENSRBIG00000031617) #28 ENSRBIG00000029648 CDX1 (ENSRBIG00000026089) #30 SLC6A7 (ENSRBIG00000033408) #31 CAMK2A (ENSRBIG00000040779) #32 ARSI (ENSRBIG00000031647) #33 TCOF1 (ENSRBIG00000032993) #34 CD74 (ENSRBIG00000042547) #35 ENSRBIG00000039331 ##36 Golden snub-nosed monkey MODERN SPECIES 2594 FBXO38 (ENSRROG00000028798) #9 HTR4 (ENSRROG00000041400) #10 ADRB2 (ENSRROG00000023775) #11 SH3TC2 (ENSRROG00000035976) #12 ABLIM3 (ENSRROG00000044842) #13 AFAP1L1 (ENSRROG00000035083) #15 GRPEL2 (ENSRROG00000030768) PCYOX1L (ENSRROG00000045676) #16 IL17B (ENSRROG00000020909) #17 ENSRROG00000040365 ENSRROG00000033814 CSNK1A1 (ENSRROG00000032970) #19 ENSRROG00000031607 ARHGEF37 (ENSRROG00000027184) #20 PPARGC1B (ENSRROG00000029594) #22 ENSRROG00000041184 #23 Hominoidea ANCESTRAL SPECIES 8 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00860000136176 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.g.b ##36 ENSGT00940000157857 Hominidae ANCESTRAL SPECIES 7 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00860000136176 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.g.b ##36 ENSGT00940000157857 Homo/Pan/Gorilla group ANCESTRAL SPECIES 7 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT00390000009776.j.a.a ENSGT01100000263544.c.a.a.a #25 ENSGT00860000136176 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.g.b ##36 Gorilla MODERN SPECIES 18 MARCOL (ENSGGOG00000041755) SPINK13 (ENSGGOG00000025175) SPINK7 (ENSGGOG00000001299) #7 ENSGGOG00000023945 #8 FBXO38 (ENSGGOG00000004687) #9 HTR4 (ENSGGOG00000016400) #10 ADRB2 (ENSGGOG00000005445) #11 SH3TC2 (ENSGGOG00000006958) #12 ABLIM3 (ENSGGOG00000005384) #13 AFAP1L1 (ENSGGOG00000005401) #15 GRPEL2 (ENSGGOG00000005410) PCYOX1L (ENSGGOG00000005413) #16 IL17B (ENSGGOG00000005421) #17 CSNK1A1 (ENSGGOG00000013926) #19 ARHGEF37 (ENSGGOG00000001871) #20 PPARGC1B (ENSGGOG00000009505) #22 ENSGGOG00000010699 #23 ENSGGOG00000041643 SLC26A2 (ENSGGOG00000000528) #25 ENSGGOG00000041991 TIGD6 (ENSGGOG00000008920) HMGXB3 (ENSGGOG00000008921) #26 CSF1R (ENSGGOG00000008936) #27 ENSGGOG00000015098 PDGFRB (ENSGGOG00000007244) #28 ENSGGOG00000000106 SLC6A7 (ENSGGOG00000000107) #31 CAMK2A (ENSGGOG00000000108) #32 ARSI (ENSGGOG00000000111) #33 TCOF1 (ENSGGOG00000011690) #34 CD74 (ENSGGOG00000011709) #35 Homo/Pan group ANCESTRAL SPECIES 8 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT00390000009776.j.a.a ENSGT01100000263544.c.a.a.a #25 ENSGT00860000136176 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.g.b ##36 Pan ANCESTRAL SPECIES 10 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700.kb.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT00390000009776.j.a.a ENSGT01100000263544.c.a.a.a #25 ENSGT00860000136176 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.g.b ##36 Chimpanzee MODERN SPECIES 18 MARCOL (ENSPTRG00000051181) SPINK13 (ENSPTRG00000034142) SPINK7 (ENSPTRG00000017387) #7 SPINK9 (ENSPTRG00000028533) #8 FBXO38 (ENSPTRG00000017388) #9 HTR4 (ENSPTRG00000017389) #10 ADRB2 (ENSPTRG00000017391) #11 SH3TC2 (ENSPTRG00000017392) #12 ABLIM3 (ENSPTRG00000017393) #13 AFAP1L1 (ENSPTRG00000017394) #15 GRPEL2 (ENSPTRG00000017396) PCYOX1L (ENSPTRG00000017397) #16 IL17B (ENSPTRG00000017399) #17 CSNK1A1 (ENSPTRG00000017401) #19 ARHGEF37 (ENSPTRG00000017402) #20 PPARGC1B (ENSPTRG00000017403) #22 PDE6A (ENSPTRG00000017404) #23 ENSPTRG00000051114 SLC26A2 (ENSPTRG00000043485) #25 ENSPTRG00000048680 TIGD6 (ENSPTRG00000049458) HMGXB3 (ENSPTRG00000017408) #26 CSF1R (ENSPTRG00000017409) #27 PDGFRB (ENSPTRG00000044533) #28 CDX1 (ENSPTRG00000017411) #30 SLC6A7 (ENSPTRG00000017413) #31 CAMK2A (ENSPTRG00000017414) #32 ARSI (ENSPTRG00000017415) #33 TCOF1 (ENSPTRG00000017416) #34 CD74 (ENSPTRG00000017417) #35 RPS14 (ENSPTRG00000017418) ##36 Bonobo MODERN SPECIES 18 SPINK13 (ENSPPAG00000026789) SPINK7 (ENSPPAG00000037231) #7 ENSPPAG00000039891 #8 FBXO38 (ENSPPAG00000016960) #9 HTR4 (ENSPPAG00000040790) #10 ADRB2 (ENSPPAG00000036592) #11 SH3TC2 (ENSPPAG00000021974) #12 ABLIM3 (ENSPPAG00000029456) #13 AFAP1L1 (ENSPPAG00000035426) #15 GRPEL2 (ENSPPAG00000032219) PCYOX1L (ENSPPAG00000038525) #16 IL17B (ENSPPAG00000034378) #17 CSNK1A1 (ENSPPAG00000041093) #19 ENSPPAG00000029858 ARHGEF37 (ENSPPAG00000032767) #20 PPARGC1B (ENSPPAG00000035226) #22 PDE6A (ENSPPAG00000038123) #23 ENSPPAG00000026689 SLC26A2 (ENSPPAG00000038310) #25 ENSPPAG00000012250 TIGD6 (ENSPPAG00000008619) HMGXB3 (ENSPPAG00000008815) #26 CSF1R (ENSPPAG00000041729) #27 PDGFRB (ENSPPAG00000037485) #28 CDX1 (ENSPPAG00000034240) #30 SLC6A7 (ENSPPAG00000006132) #31 CAMK2A (ENSPPAG00000042225) #32 ARSI (ENSPPAG00000039302) #33 TCOF1 (ENSPPAG00000038092) #34 CD74 (ENSPPAG00000037472) #35 RPS14 (ENSPPAG00000027035) ##36 Human MODERN SPECIES 17 MARCOL (ENSG00000248109) SPINK13 (ENSG00000214510) SPINK7 (ENSG00000145879) #7 SPINK9 (ENSG00000204909) #8 FBXO38 (ENSG00000145868) #9 HTR4 (ENSG00000164270) #10 ADRB2 (ENSG00000169252) #11 SH3TC2 (ENSG00000169247) #12 ABLIM3 (ENSG00000173210) #13 AFAP1L1 (ENSG00000157510) #15 GRPEL2 (ENSG00000164284) PCYOX1L (ENSG00000145882) #16 IL17B (ENSG00000127743) #17 CSNK1A1 (ENSG00000113712) #19 ARHGEF37 (ENSG00000183111) #20 PPARGC1B (ENSG00000155846) #22 PDE6A (ENSG00000132915) #23 SLC26A2 (ENSG00000155850) #25 TIGD6 (ENSG00000164296) HMGXB3 (ENSG00000113716) #26 CSF1R (ENSG00000182578) #27 PDGFRB (ENSG00000113721) #28 CDX1 (ENSG00000113722) #30 SLC6A7 (ENSG00000011083) #31 CAMK2A (ENSG00000070808) #32 ARSI (ENSG00000183876) #33 TCOF1 (ENSG00000070814) #34 CD74 (ENSG00000019582) #35 RPS14 (ENSG00000164587) ##36 NDST1 (ENSG00000070614) SYNPO (ENSG00000171992) Orangutan MODERN SPECIES 18 SPINK13 (ENSPPYG00000015924) SPINK7 (ENSPPYG00000015925) #7 ENSPPYG00000015926 #8 FBXO38 (ENSPPYG00000015927) #9 HTR4 (ENSPPYG00000015928) #10 ADRB2 (ENSPPYG00000015929) #11 SH3TC2 (ENSPPYG00000015930) #12 ABLIM3 (ENSPPYG00000015931) #13 AFAP1L1 (ENSPPYG00000015932) #15 GRPEL2 (ENSPPYG00000015933) PCYOX1L (ENSPPYG00000015934) #16 IL17B (ENSPPYG00000015935) #17 ENSPPYG00000036819 CSNK1A1 (ENSPPYG00000015936) #19 ARHGEF37 (ENSPPYG00000015937) #20 PPARGC1B (ENSPPYG00000015938) #22 PDE6A (ENSPPYG00000015939) #23 SLC26A2 (ENSPPYG00000038636) #25 HMGXB3 (ENSPPYG00000015941) #26 CSF1R (ENSPPYG00000015942) #27 PDGFRB (ENSPPYG00000015943) #28 CDX1 (ENSPPYG00000015944) #30 SLC6A7 (ENSPPYG00000015945) #31 CAMK2A (ENSPPYG00000015946) #32 ARSI (ENSPPYG00000015947) #33 TCOF1 (ENSPPYG00000015948) #34 CD74 (ENSPPYG00000015949) #35 RPS14 (ENSPPYG00000035071) ##36 NDST1 (ENSPPYG00000015951) SYNPO (ENSPPYG00000015952) MYOZ3 (ENSPPYG00000015953) Gibbon MODERN SPECIES 11 MARCOL (ENSNLEG00000031931) ENSNLEG00000010067 SPINK7 (ENSNLEG00000010071) #7 ENSNLEG00000010076 #8 FBXO38 (ENSNLEG00000010079) #9 HTR4 (ENSNLEG00000010112) #10 SH3TC2 (ENSNLEG00000010121) #12 ABLIM3 (ENSNLEG00000010135) #13 AFAP1L1 (ENSNLEG00000010143) #15 GRPEL2 (ENSNLEG00000029202) PCYOX1L (ENSNLEG00000010166) #16 IL17B (ENSNLEG00000035704) #17 ENSNLEG00000010172 CSNK1A1 (ENSNLEG00000027267) #19 ARHGEF37 (ENSNLEG00000010188) #20 PPARGC1B (ENSNLEG00000010193) #22 ENSNLEG00000035864 PDE6A (ENSNLEG00000010198) #23 SLC26A2 (ENSNLEG00000010209) #25 ENSNLEG00000028618 TIGD6 (ENSNLEG00000010212) HMGXB3 (ENSNLEG00000010213) #26 CSF1R (ENSNLEG00000010225) #27 PDGFRB (ENSNLEG00000010243) #28 ENSNLEG00000010259 #30 SLC6A7 (ENSNLEG00000010260) #31 ENSNLEG00000010278 ENSNLEG00000010308 #33 TCOF1 (ENSNLEG00000010310) #34 CD74 (ENSNLEG00000010343) #35 ENSNLEG00000010366 ##36 Tarsier MODERN SPECIES 4953 PPARGC1B (ENSTSYG00000034354) #22 PDE6A (ENSTSYG00000012904) #23 SLC26A2 (ENSTSYG00000013375) #25 HMGXB3 (ENSTSYG00000012751) #26 CSF1R (ENSTSYG00000032396) #27 PDGFRB (ENSTSYG00000026745) #28 ENSTSYG00000030948 #30 SLC6A7 (ENSTSYG00000036951) #31 CAMK2A (ENSTSYG00000014099) #32 ARSI (ENSTSYG00000034592) #33 Strepsirrhini ANCESTRAL SPECIES 5 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Lemuriformes ANCESTRAL SPECIES 21 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Lemuriformes_a ANCESTRAL SPECIES 13 ENSGT00740000116871 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000159769.a.b ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Coquerels sifaka MODERN SPECIES 738 SPINK14 (ENSPCOG00000015724) SPINK6 (ENSPCOG00000012126) MARCOL (ENSPCOG00000015672) SPINK7 (ENSPCOG00000017440) #7 FBXO38 (ENSPCOG00000019795) #9 HTR4 (ENSPCOG00000026629) #10 SH3TC2 (ENSPCOG00000016330) #12 ABLIM3 (ENSPCOG00000021938) #13 AFAP1L1 (ENSPCOG00000020332) #15 GRPEL2 (ENSPCOG00000027577) PCYOX1L (ENSPCOG00000027029) #16 IL17B (ENSPCOG00000018305) #17 ENSPCOG00000027113 #19 ENSPCOG00000017255 #19 ARHGEF37 (ENSPCOG00000018318) #20 PPARGC1B (ENSPCOG00000024059) #22 PDE6A (ENSPCOG00000028318) #23 SLC26A2 (ENSPCOG00000021285) #25 HMGXB3 (ENSPCOG00000023148) #26 CSF1R (ENSPCOG00000025616) #27 PDGFRB (ENSPCOG00000028113) #28 CDX1 (ENSPCOG00000018558) #30 SLC6A7 (ENSPCOG00000019876) #31 ENSPCOG00000024805 ARSI (ENSPCOG00000006855) #33 TCOF1 (ENSPCOG00000017379) #34 CD74 (ENSPCOG00000016171) #35 RPS14 (ENSPCOG00000020077) #36 NDST1 (ENSPCOG00000021870) SYNPO (ENSPCOG00000014120) MYOZ3 (ENSPCOG00000024354) Greater bamboo lemur MODERN SPECIES 50 SPINK13 (ENSPSMG00000024551) SPINK7 (ENSPSMG00000024547) #7 SPINK9 (ENSPSMG00000024545) #8 FBXO38 (ENSPSMG00000024539) #9 HTR4 (ENSPSMG00000024509) #10 ADRB2 (ENSPSMG00000024452) #11 SH3TC2 (ENSPSMG00000024445) #12 ABLIM3 (ENSPSMG00000024414) #13 AFAP1L1 (ENSPSMG00000024305) #15 GRPEL2 (ENSPSMG00000024280) PCYOX1L (ENSPSMG00000024261) #16 IL17B (ENSPSMG00000024251) #17 ENSPSMG00000024239 CSNK1A1 (ENSPSMG00000024208) #19 ARHGEF37 (ENSPSMG00000024142) #20 PPARGC1B (ENSPSMG00000024131) #22 ENSPSMG00000024111 PDE6A (ENSPSMG00000024104) #23 SLC26A2 (ENSPSMG00000024091) #25 TIGD6 (ENSPSMG00000024090) HMGXB3 (ENSPSMG00000024071) #26 CSF1R (ENSPSMG00000024029) #27 PDGFRB (ENSPSMG00000023975) #28 CDX1 (ENSPSMG00000023900) #30 SLC6A7 (ENSPSMG00000023895) #31 ENSPSMG00000023853 ARSI (ENSPSMG00000023785) #33 TCOF1 (ENSPSMG00000023681) #34 CD74 (ENSPSMG00000023546) #35 ENSPSMG00000023524 #36 NDST1 (ENSPSMG00000023510) Mouse lemur MODERN SPECIES 15 ENSMICG00000030041 SPINK7 (ENSMICG00000002552) #7 SPINK9 (ENSMICG00000046265) #8 FBXO38 (ENSMICG00000002556) #9 HTR4 (ENSMICG00000002566) #10 ADRB2 (ENSMICG00000002569) #11 SH3TC2 (ENSMICG00000002571) #12 ABLIM3 (ENSMICG00000002582) #13 AFAP1L1 (ENSMICG00000002598) #15 GRPEL2 (ENSMICG00000042083) PCYOX1L (ENSMICG00000028126) #16 IL17B (ENSMICG00000002611) #17 CSNK1A1 (ENSMICG00000027056) #19 ENSMICG00000027812 ARHGEF37 (ENSMICG00000002691) #20 PPARGC1B (ENSMICG00000002702) #22 PDE6A (ENSMICG00000002710) #23 SLC26A2 (ENSMICG00000028691) #25 HMGXB3 (ENSMICG00000002740) #26 CSF1R (ENSMICG00000002770) #27 PDGFRB (ENSMICG00000002797) #28 CDX1 (ENSMICG00000033499) #30 SLC6A7 (ENSMICG00000002824) #31 CAMK2A (ENSMICG00000002837) #32 ARSI (ENSMICG00000002855) #33 TCOF1 (ENSMICG00000002858) #34 CD74 (ENSMICG00000002890) #35 RPS14 (ENSMICG00000027116) #36 NDST1 (ENSMICG00000008828) SYNPO (ENSMICG00000037458) MYOZ3 (ENSMICG00000045206) Bushbaby MODERN SPECIES 118 SCGB3A2 (ENSOGAG00000002793) C5orf46 (ENSOGAG00000016090) SPINK5 (ENSOGAG00000013274) SPINK7 (ENSOGAG00000001393) #7 HTR4 (ENSOGAG00000001398) #10 FBXO38 (ENSOGAG00000001396) #9 ADRB2 (ENSOGAG00000012705) #11 SH3TC2 (ENSOGAG00000013586) #12 ABLIM3 (ENSOGAG00000014316) #13 AFAP1L1 (ENSOGAG00000014322) #15 GRPEL2 (ENSOGAG00000014326) PCYOX1L (ENSOGAG00000014328) #16 IL17B (ENSOGAG00000014331) #17 ENSOGAG00000003253 #19 ARHGEF37 (ENSOGAG00000003254) #20 PPARGC1B (ENSOGAG00000015983) #22 PDE6A (ENSOGAG00000015989) #23 SLC26A2 (ENSOGAG00000015997) #25 HMGXB3 (ENSOGAG00000004593) #26 CSF1R (ENSOGAG00000004598) #27 PDGFRB (ENSOGAG00000004602) #28 CDX1 (ENSOGAG00000025120) #30 SLC6A7 (ENSOGAG00000004607) #31 ENSOGAG00000024303 ENSOGAG00000004613 ARSI (ENSOGAG00000004618) #33 TCOF1 (ENSOGAG00000004619) #34 ENSOGAG00000031151 CD74 (ENSOGAG00000004628) #35 ENSOGAG00000000721 #36 NDST1 (ENSOGAG00000011074) Euarchontoglires_A ANCESTRAL SPECIES 8 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Tree shrew MODERN SPECIES 2735 PPARGC1B (ENSTBEG00000011857) #22 PDE6A (ENSTBEG00000012307) #23 HMGXB3 (ENSTBEG00000013169) #26 CSF1R (ENSTBEG00000013483) #27 Glires ANCESTRAL SPECIES 7 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Rodentia ANCESTRAL SPECIES 7 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Rodentia_A ANCESTRAL SPECIES 7 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Sciuridae ANCESTRAL SPECIES 18 ENSGT00740000116871 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700.x.b.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Marmotini ANCESTRAL SPECIES 23 ENSGT00740000116871 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700.x.b.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Marmotini_b ANCESTRAL SPECIES 16 ENSGT00740000116871 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700.x.b.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Arctic ground squirrel MODERN SPECIES 29 ENSUPAG00010013059 SPINK13 (ENSUPAG00010013067) SPINK7 (ENSUPAG00010013075) #7 ENSUPAG00010013087 FBXO38 (ENSUPAG00010013108) #9 HTR4 (ENSUPAG00010013156) #10 ADRB2 (ENSUPAG00010013166) #11 SH3TC2 (ENSUPAG00010013173) #12 ABLIM3 (ENSUPAG00010013211) #13 AFAP1L1 (ENSUPAG00010013342) #15 GRPEL2 (ENSUPAG00010013353) PCYOX1L (ENSUPAG00010013355) #16 IL17B (ENSUPAG00010013375) #17 ENSUPAG00010013391 #19 ARHGEF37 (ENSUPAG00010013464) #20 PPARGC1B (ENSUPAG00010013478) #22 PDE6A (ENSUPAG00010013495) #23 SLC26A2 (ENSUPAG00010013538) #25 TIGD6 (ENSUPAG00010013551) HMGXB3 (ENSUPAG00010013558) #26 CSF1R (ENSUPAG00010013615) #27 Squirrel MODERN SPECIES 104 ENSSTOG00000033221 SPINK13 (ENSSTOG00000032408) SPINK7 (ENSSTOG00000033073) #7 FBXO38 (ENSSTOG00000009088) #9 HTR4 (ENSSTOG00000007489) #10 ADRB2 (ENSSTOG00000010102) #11 ENSSTOG00000023821 SH3TC2 (ENSSTOG00000015087) #12 ABLIM3 (ENSSTOG00000015100) #13 AFAP1L1 (ENSSTOG00000015118) #15 GRPEL2 (ENSSTOG00000015128) PCYOX1L (ENSSTOG00000015137) #16 IL17B (ENSSTOG00000015142) #17 ENSSTOG00000022141 #19 ARHGEF37 (ENSSTOG00000008681) #20 PPARGC1B (ENSSTOG00000024758) #22 PDE6A (ENSSTOG00000008725) #23 SLC26A2 (ENSSTOG00000006553) #25 TIGD6 (ENSSTOG00000008758) HMGXB3 (ENSSTOG00000008763) #26 CSF1R (ENSSTOG00000026851) #27 PDGFRB (ENSSTOG00000025211) #28 CDX1 (ENSSTOG00000020585) #30 SLC6A7 (ENSSTOG00000007042) #31 CAMK2A (ENSSTOG00000008932) #32 ARSI (ENSSTOG00000026168) #33 TCOF1 (ENSSTOG00000008957) #34 CD74 (ENSSTOG00000009017) #35 RPS14 (ENSSTOG00000026574) #36 NDST1 (ENSSTOG00000000336) SYNPO (ENSSTOG00000025895) Alpin marmot MODERN SPECIES SPINK13 (ENSMMMG00000018976) SPINK7 (ENSMMMG00000018980) #7 ENSMMMG00000018983 FBXO38 (ENSMMMG00000018990) #9 HTR4 (ENSMMMG00000019045) #10 ADRB2 (ENSMMMG00000019082) #11 SH3TC2 (ENSMMMG00000019086) #12 ABLIM3 (ENSMMMG00000019099) #13 AFAP1L1 (ENSMMMG00000019132) #15 GRPEL2 (ENSMMMG00000019143) PCYOX1L (ENSMMMG00000019178) #16 IL17B (ENSMMMG00000019186) #17 ENSMMMG00000019193 ENSMMMG00000019199 #19 ARHGEF37 (ENSMMMG00000019234) #20 PPARGC1B (ENSMMMG00000019280) #22 PDE6A (ENSMMMG00000019293) #23 ENSMMMG00000019311 SLC26A2 (ENSMMMG00000019313) #25 TIGD6 (ENSMMMG00000019320) HMGXB3 (ENSMMMG00000019323) #26 CSF1R (ENSMMMG00000019339) #27 ENSMMMG00000019351 ENSMMMG00000019359 PDGFRB (ENSMMMG00000019362) #28 ENSMMMG00000019448 #30 SLC6A7 (ENSMMMG00000019461) #31 CAMK2A (ENSMMMG00000019478) #32 ARSI (ENSMMMG00000019539) #33 TCOF1 (ENSMMMG00000019543) #34 CD74 (ENSMMMG00000019567) #35 Eurasian red squirrel MODERN SPECIES 15 ENSSVLG00005009773 SPINK13 (ENSSVLG00005009725) SPINK7 (ENSSVLG00005009662) #7 SPINK9 (ENSSVLG00005009630) #8 FBXO38 (ENSSVLG00005009534) #9 HTR4 (ENSSVLG00005009342) #10 ADRB2 (ENSSVLG00005009293) #11 SH3TC2 (ENSSVLG00005009091) #12 ABLIM3 (ENSSVLG00005008990) #13 AFAP1L1 (ENSSVLG00005008886) #15 GRPEL2 (ENSSVLG00005008810) PCYOX1L (ENSSVLG00005008779) #16 IL17B (ENSSVLG00005008753) #17 CSNK1A1 (ENSSVLG00005008669) #19 ARHGEF37 (ENSSVLG00005008585) #20 PPARGC1B (ENSSVLG00005008537) #22 PDE6A (ENSSVLG00005008299) #23 ENSSVLG00005008227 #25 ENSSVLG00005008152 #25 HMGXB3 (ENSSVLG00005008069) #26 CSF1R (ENSSVLG00005007891) #27 PDGFRB (ENSSVLG00005007828) #28 CDX1 (ENSSVLG00005007785) #30 SLC6A7 (ENSSVLG00005007630) #31 CAMK2A (ENSSVLG00005007155) #32 ARSI (ENSSVLG00005007002) #33 TCOF1 (ENSSVLG00005006969) #34 CD74 (ENSSVLG00005006927) #35 ENSSVLG00005006912 #36 NDST1 (ENSSVLG00005006873) SYNPO (ENSSVLG00005006825) Hystricomorpha ANCESTRAL SPECIES 27 ENSGT00740000116871 ENSGT00940000165308 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Hystricomorpha_a ANCESTRAL SPECIES 24 ENSGT00740000116871 ENSGT00940000165308 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Hystricomorpha_b ANCESTRAL SPECIES 57 ENSGT00530000064225 ENSGT00740000116871 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Long-tailed chinchilla MODERN SPECIES 122 C5orf46 (ENSCLAG00000013364) SPINK5 (ENSCLAG00000010015) SPINK6 (ENSCLAG00000010382) SPINK7 (ENSCLAG00000012052) #7 ENSCLAG00000011836 FBXO38 (ENSCLAG00000011431) #9 HTR4 (ENSCLAG00000010344) #10 ADRB2 (ENSCLAG00000017769) #11 SH3TC2 (ENSCLAG00000012078) #12 ABLIM3 (ENSCLAG00000015956) #13 AFAP1L1 (ENSCLAG00000010477) #15 PCYOX1L (ENSCLAG00000010474) #16 IL17B (ENSCLAG00000012430) #17 ENSCLAG00000010744 #19 ARHGEF37 (ENSCLAG00000012033) #20 PPARGC1B (ENSCLAG00000015452) #22 PDE6A (ENSCLAG00000015700) #23 SLC26A2 (ENSCLAG00000014413) #25 HMGXB3 (ENSCLAG00000010310) #26 CSF1R (ENSCLAG00000011617) #27 PDGFRB (ENSCLAG00000009688) #28 CDX1 (ENSCLAG00000009492) #30 SLC6A7 (ENSCLAG00000011923) #31 CAMK2A (ENSCLAG00000012010) #32 ARSI (ENSCLAG00000014790) #33 TCOF1 (ENSCLAG00000010605) #34 CD74 (ENSCLAG00000014142) #35 ENSCLAG00000017348 #36 NDST1 (ENSCLAG00000014298) ENSCLAG00000017020 MYOZ3 (ENSCLAG00000011296) Degu MODERN SPECIES 81 SPINK6 (ENSODEG00000005901) ENSODEG00000005177 SPINK7 (ENSODEG00000005558) #7 ENSODEG00000006116 FBXO38 (ENSODEG00000006237) #9 HTR4 (ENSODEG00000005142) #10 SH3TC2 (ENSODEG00000005803) #12 ABLIM3 (ENSODEG00000005665) #13 AFAP1L1 (ENSODEG00000005278) #15 GRPEL2 (ENSODEG00000005652) PCYOX1L (ENSODEG00000006043) #16 IL17B (ENSODEG00000006115) #17 ENSODEG00000006337 #19 ENSODEG00000006577 ARHGEF37 (ENSODEG00000006724) #20 PPARGC1B (ENSODEG00000004901) #22 ENSODEG00000005721 #23 SLC26A2 (ENSODEG00000006352) #25 HMGXB3 (ENSODEG00000006575) #26 CSF1R (ENSODEG00000004884) #27 PDGFRB (ENSODEG00000007189) #28 CDX1 (ENSODEG00000005756) #30 SLC6A7 (ENSODEG00000005582) #31 CAMK2A (ENSODEG00000006434) #32 ARSI (ENSODEG00000005121) #33 ENSODEG00000005372 #34 CD74 (ENSODEG00000006374) #35 ENSODEG00000005622 #36 NDST1 (ENSODEG00000006023) SYNPO (ENSODEG00000005711) MYOZ3 (ENSODEG00000006247) Guinea pig MODERN SPECIES 6 ENSCPOG00000032360 ENSCPOG00000008611 SPINK7 (ENSCPOG00000027129) #7 ENSCPOG00000033815 FBXO38 (ENSCPOG00000012424) #9 HTR4 (ENSCPOG00000012428) #10 ADRB2 (ENSCPOG00000012753) #11 SH3TC2 (ENSCPOG00000014919) #12 ABLIM3 (ENSCPOG00000014922) #13 AFAP1L1 (ENSCPOG00000014925) #15 GRPEL2 (ENSCPOG00000031461) PCYOX1L (ENSCPOG00000024170) #16 IL17B (ENSCPOG00000019682) #17 CSNK1A1 (ENSCPOG00000036829) #19 ARHGEF37 (ENSCPOG00000002907) #20 PPARGC1B (ENSCPOG00000001958) #22 PDE6A (ENSCPOG00000001962) #23 SLC26A2 (ENSCPOG00000001964) #25 HMGXB3 (ENSCPOG00000002607) #26 CSF1R (ENSCPOG00000024309) #27 PDGFRB (ENSCPOG00000005994) #28 ENSCPOG00000020353 #30 SLC6A7 (ENSCPOG00000027356) #31 CAMK2A (ENSCPOG00000006638) #32 ARSI (ENSCPOG00000021634) #33 TCOF1 (ENSCPOG00000002741) #34 CD74 (ENSCPOG00000034371) #35 RPS14 (ENSCPOG00000024408) #36 NDST1 (ENSCPOG00000002897) SYNPO (ENSCPOG00000034268) MYOZ3 (ENSCPOG00000032133) Naked mole-rat female MODERN SPECIES 25 ENSHGLG00000007633 #10 ENSHGLG00000047084 ENSHGLG00000045515 #11 ENSHGLG00000009971 ENSHGLG00000033081 #12 ENSHGLG00000036885 #12 ABLIM3 (ENSHGLG00000012245) #13 AFAP1L1 (ENSHGLG00000017322) #15 GRPEL2 (ENSHGLG00000041395) PCYOX1L (ENSHGLG00000018480) #16 IL17B (ENSHGLG00000018467) #17 CSNK1A1 (ENSHGLG00000014074) #19 ENSHGLG00000050787 ARHGEF37 (ENSHGLG00000015980) #20 ENSHGLG00000050938 PPARGC1B (ENSHGLG00000005967) #22 ENSHGLG00000037858 PDE6A (ENSHGLG00000006466) #23 SLC26A2 (ENSHGLG00000008518) #25 HMGXB3 (ENSHGLG00000009767) #26 CSF1R (ENSHGLG00000003579) #27 PDGFRB (ENSHGLG00000003797) #28 CDX1 (ENSHGLG00000004687) #30 SLC6A7 (ENSHGLG00000005136) #31 CAMK2A (ENSHGLG00000006526) #32 ARSI (ENSHGLG00000007275) #33 TCOF1 (ENSHGLG00000007903) #34 CD74 (ENSHGLG00000003902) #35 RPS14 (ENSHGLG00000004211) #36 NDST1 (ENSHGLG00000004281) SYNPO (ENSHGLG00000039282) Rodentia_B ANCESTRAL SPECIES 4 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Myomorpha ANCESTRAL SPECIES 5 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Muroidea ANCESTRAL SPECIES 4 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Muroidea_A ANCESTRAL SPECIES 18 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Cricetidae ANCESTRAL SPECIES 18 ENSGT00940000164814 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.c.a ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Cricetidae_B ANCESTRAL SPECIES 15 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.c.a ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Prairie vole MODERN SPECIES 5 ENSMOCG00000022868 Spink13 (ENSMOCG00000019263) Spink7 (ENSMOCG00000017843) #7 Gm36368 (ENSMOCG00000003300) Fbxo38 (ENSMOCG00000015410) #9 Htr4 (ENSMOCG00000007510) #10 Adrb2 (ENSMOCG00000002446) #11 Sh3tc2 (ENSMOCG00000001886) #12 Ablim3 (ENSMOCG00000022187) #13 Afap1l1 (ENSMOCG00000009034) #15 Grpel2 (ENSMOCG00000005100) Pcyox1l (ENSMOCG00000002804) #16 Il17b (ENSMOCG00000003368) #17 Csnk1a1 (ENSMOCG00000014668) #19 Arhgef37 (ENSMOCG00000017841) #20 Ppargc1b (ENSMOCG00000014885) #22 Pde6a (ENSMOCG00000007130) #23 Slc26a2 (ENSMOCG00000020889) #25 Hmgxb3 (ENSMOCG00000014574) #26 Csf1r (ENSMOCG00000018935) #27 Pdgfrb (ENSMOCG00000015349) #28 Cdx1 (ENSMOCG00000005003) #30 Slc6a7 (ENSMOCG00000021402) #31 Camk2a (ENSMOCG00000006768) #32 Arsi (ENSMOCG00000011780) #33 Tcof1 (ENSMOCG00000007081) #34 Cd74 (ENSMOCG00000008628) #35 ENSMOCG00000005011 #36 Ndst1 (ENSMOCG00000023013) Synpo (ENSMOCG00000020812) Myoz3 (ENSMOCG00000022001) Northern American deer mouse MODERN SPECIES 10 ENSPEMG00000010935 Spink13 (ENSPEMG00000010732) Spink7 (ENSPEMG00000009248) #7 Gm36368 (ENSPEMG00000008650) Fbxo38 (ENSPEMG00000003062) #9 Htr4 (ENSPEMG00000018290) #10 Adrb2 (ENSPEMG00000018963) #11 Sh3tc2 (ENSPEMG00000002472) #12 Ablim3 (ENSPEMG00000006536) #13 Afap1l1 (ENSPEMG00000012507) #15 ENSPEMG00000031083 Pcyox1l (ENSPEMG00000008397) #16 Il17b (ENSPEMG00000016022) #17 Csnk1a1 (ENSPEMG00000015069) #19 Arhgef37 (ENSPEMG00000006816) #20 Ppargc1b (ENSPEMG00000018822) #22 Pde6a (ENSPEMG00000007308) #23 Slc26a2 (ENSPEMG00000026991) #25 Hmgxb3 (ENSPEMG00000009704) #26 Csf1r (ENSPEMG00000010942) #27 Pdgfrb (ENSPEMG00000016131) #28 Cdx1 (ENSPEMG00000029534) #30 Slc6a7 (ENSPEMG00000015046) #31 Camk2a (ENSPEMG00000016613) #32 Arsi (ENSPEMG00000017637) #33 Cd74 (ENSPEMG00000015385) #35 ENSPEMG00000000346 #36 Ndst1 (ENSPEMG00000009619) Synpo (ENSPEMG00000013062) Myoz3 (ENSPEMG00000005852) Rbm22 (ENSPEMG00000001753) Cricetinae ANCESTRAL SPECIES 14 ENSGT00940000164814 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.c.a ENSGT00390000011206.b.e #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Chinese hamster chok1gshd MODERN SPECIES 153 Spink13 (ENSCGRG00001022801) Spink7 (ENSCGRG00001024419) #7 Gm36368 (ENSCGRG00001012234) Fbxo38 (ENSCGRG00001021538) #9 Htr4 (ENSCGRG00001012683) #10 Adrb2 (ENSCGRG00001009662) #11 Sh3tc2 (ENSCGRG00001020826) #12 Ablim3 (ENSCGRG00001021818) #13 Afap1l1 (ENSCGRG00001018190) #15 ENSCGRG00001022902 #16 ENSCGRG00001024056 #16 Il17b (ENSCGRG00001005197) #17 ENSCGRG00001021849 Csnk1a1 (ENSCGRG00001015873) #19 Arhgef37 (ENSCGRG00001011933) #20 Ppargc1b (ENSCGRG00001017949) #22 Pde6a (ENSCGRG00001018960) #23 Slc26a2 (ENSCGRG00001016363) #25 Hmgxb3 (ENSCGRG00001022214) #26 Csf1r (ENSCGRG00001013504) #27 Pdgfrb (ENSCGRG00001022643) #28 Cdx1 (ENSCGRG00001016843) #30 Slc6a7 (ENSCGRG00001006717) #31 ENSCGRG00001022640 Arsi (ENSCGRG00001004125) #33 Tcof1 (ENSCGRG00001009700) #34 Cd74 (ENSCGRG00001022698) #35 RPS14 (ENSCGRG00001019064) #36 ENSCGRG00001007906 Ndst1 (ENSCGRG00001024486) Synpo (ENSCGRG00001015166) Golden Hamster MODERN SPECIES 665 Apcdd1 (ENSMAUG00000010015) ENSMAUG00000013780 Spink13 (ENSMAUG00000007928) Spink7 (ENSMAUG00000009498) #7 Gm36368 (ENSMAUG00000015079) Fbxo38 (ENSMAUG00000019180) #9 Htr4 (ENSMAUG00000006143) #10 Adrb2 (ENSMAUG00000017373) #11 Sh3tc2 (ENSMAUG00000019540) #12 Ablim3 (ENSMAUG00000019807) #13 Afap1l1 (ENSMAUG00000010737) #15 Grpel2 (ENSMAUG00000014948) Il17b (ENSMAUG00000015682) #17 Csnk1a1 (ENSMAUG00000001051) #19 Arhgef37 (ENSMAUG00000005987) #20 Ppargc1b (ENSMAUG00000014191) #22 Pde6a (ENSMAUG00000002281) #23 Slc26a2 (ENSMAUG00000013332) #25 Hmgxb3 (ENSMAUG00000018828) #26 Csf1r (ENSMAUG00000009005) #27 Pdgfrb (ENSMAUG00000012051) #28 Cdx1 (ENSMAUG00000013537) #30 Slc6a7 (ENSMAUG00000009461) #31 Camk2a (ENSMAUG00000019808) #32 Arsi (ENSMAUG00000000226) #33 Tcof1 (ENSMAUG00000000553) #34 Cd74 (ENSMAUG00000015863) #35 ENSMAUG00000015670 #36 Ndst1 (ENSMAUG00000017050) Synpo (ENSMAUG00000010215) Myoz3 (ENSMAUG00000012595) Murinae ANCESTRAL SPECIES 17 ENSGT00940000164814.a ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.u #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Mus ANCESTRAL SPECIES 19 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00800000125342 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.u #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Mus_A ANCESTRAL SPECIES 19 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00800000125342 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.u #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Mus_B ANCESTRAL SPECIES 19 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00800000125342 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.u.a #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Mouse MODERN SPECIES 9 Spink13 (ENSMUSG00000073551) Spink7 (ENSMUSG00000060201) #7 Gm36368 (ENSMUSG00000110576) Spink10 (ENSMUSG00000044176) Fbxo38 (ENSMUSG00000042211) #9 Htr4 (ENSMUSG00000026322) #10 Adrb2 (ENSMUSG00000045730) #11 Sh3tc2 (ENSMUSG00000045629) #12 Ablim3 (ENSMUSG00000032735) #13 Afap1l1 (ENSMUSG00000033032) #15 Grpel2 (ENSMUSG00000024580) Pcyox1l (ENSMUSG00000024579) #16 Il17b (ENSMUSG00000024578) #17 Csnk1a1 (ENSMUSG00000024576) #19 Arhgef37 (ENSMUSG00000045094) #20 Ppargc1b (ENSMUSG00000033871) #22 Pde6a (ENSMUSG00000024575) #23 Slc26a2 (ENSMUSG00000034320) #25 Hmgxb3 (ENSMUSG00000024622) #26 Csf1r (ENSMUSG00000024621) #27 Pdgfrb (ENSMUSG00000024620) #28 Cdx1 (ENSMUSG00000024619) #30 Slc6a7 (ENSMUSG00000052026) #31 Camk2a (ENSMUSG00000024617) #32 Arsi (ENSMUSG00000036412) #33 Tcof1 (ENSMUSG00000024613) #34 Cd74 (ENSMUSG00000024610) #35 Rps14 (ENSMUSG00000024608) #36 Ndst1 (ENSMUSG00000054008) Synpo (ENSMUSG00000043079) Myoz3 (ENSMUSG00000049173) Mus_C ANCESTRAL SPECIES 16 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00800000125342 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.u.a #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a spretus MODERN SPECIES 9 Spink10 (MGP_SPRETEiJ_G0023250) Spink13 (MGP_SPRETEiJ_G0023249) Spink7 (MGP_SPRETEiJ_G0023248) #7 Fbxo38 (MGP_SPRETEiJ_G0023247) #9 Htr4 (MGP_SPRETEiJ_G0023246) #10 MGP_SPRETEiJ_G0023245 Adrb2 (MGP_SPRETEiJ_G0023244) #11 Sh3tc2 (MGP_SPRETEiJ_G0023243) #12 Ablim3 (MGP_SPRETEiJ_G0023242) #13 Afap1l1 (MGP_SPRETEiJ_G0023241) #15 Grpel2 (MGP_SPRETEiJ_G0023240) Pcyox1l (MGP_SPRETEiJ_G0023239) #16 Il17b (MGP_SPRETEiJ_G0023238) #17 Csnk1a1 (MGP_SPRETEiJ_G0023237) #19 Arhgef37 (MGP_SPRETEiJ_G0023236) #20 Ppargc1b (MGP_SPRETEiJ_G0023235) #22 Pde6a (MGP_SPRETEiJ_G0023234) #23 Slc26a2 (MGP_SPRETEiJ_G0023233) #25 Hmgxb3 (MGP_SPRETEiJ_G0023232) #26 Csf1r (MGP_SPRETEiJ_G0023231) #27 Pdgfrb (MGP_SPRETEiJ_G0023230) #28 Cdx1 (MGP_SPRETEiJ_G0023229) #30 Slc6a7 (MGP_SPRETEiJ_G0023228) #31 Camk2a (MGP_SPRETEiJ_G0023227) #32 Arsi (MGP_SPRETEiJ_G0023226) #33 Tcof1 (MGP_SPRETEiJ_G0023225) #34 Cd74 (MGP_SPRETEiJ_G0023224) #35 Rps14 (MGP_SPRETEiJ_G0023223) #36 Ndst1 (MGP_SPRETEiJ_G0023222) Synpo (MGP_SPRETEiJ_G0023221) Myoz3 (MGP_SPRETEiJ_G0023220) Steppe mouse MODERN SPECIES 2160 Arhgef37 (ENSMSIG00000019352) #20 Ppargc1b (ENSMSIG00000019610) #22 Ryukyu mouse MODERN SPECIES 9 Spink10 (MGP_CAROLIEiJ_G0022338) Spink13 (MGP_CAROLIEiJ_G0022337) Spink7 (MGP_CAROLIEiJ_G0022336) #7 Fbxo38 (MGP_CAROLIEiJ_G0022335) #9 Htr4 (MGP_CAROLIEiJ_G0022334) #10 MGP_CAROLIEiJ_G0022333 Adrb2 (MGP_CAROLIEiJ_G0022332) #11 Sh3tc2 (MGP_CAROLIEiJ_G0022331) #12 Ablim3 (MGP_CAROLIEiJ_G0022330) #13 Afap1l1 (MGP_CAROLIEiJ_G0022329) #15 Grpel2 (MGP_CAROLIEiJ_G0022328) Pcyox1l (MGP_CAROLIEiJ_G0022327) #16 Il17b (MGP_CAROLIEiJ_G0022326) #17 Csnk1a1 (MGP_CAROLIEiJ_G0022325) #19 Arhgef37 (MGP_CAROLIEiJ_G0022324) #20 Ppargc1b (MGP_CAROLIEiJ_G0022323) #22 Pde6a (MGP_CAROLIEiJ_G0022322) #23 Slc26a2 (MGP_CAROLIEiJ_G0022321) #25 Hmgxb3 (MGP_CAROLIEiJ_G0022320) #26 Csf1r (MGP_CAROLIEiJ_G0022319) #27 Pdgfrb (MGP_CAROLIEiJ_G0022318) #28 Cdx1 (MGP_CAROLIEiJ_G0022317) #30 Slc6a7 (MGP_CAROLIEiJ_G0022316) #31 Camk2a (MGP_CAROLIEiJ_G0022315) #32 Arsi (MGP_CAROLIEiJ_G0022314) #33 Tcof1 (MGP_CAROLIEiJ_G0022313) #34 Cd74 (MGP_CAROLIEiJ_G0022312) #35 Rps14 (MGP_CAROLIEiJ_G0022311) #36 Ndst1 (MGP_CAROLIEiJ_G0022310) Synpo (MGP_CAROLIEiJ_G0022309) Myoz3 (MGP_CAROLIEiJ_G0022308) Shrew mouse MODERN SPECIES 6 Spink10 (MGP_PahariEiJ_G0019068) Spink13 (MGP_PahariEiJ_G0019067) Spink7 (MGP_PahariEiJ_G0019066) #7 Fbxo38 (MGP_PahariEiJ_G0019065) #9 Htr4 (MGP_PahariEiJ_G0019064) #10 MGP_PahariEiJ_G0019063 Adrb2 (MGP_PahariEiJ_G0019062) #11 Sh3tc2 (MGP_PahariEiJ_G0019061) #12 Ablim3 (MGP_PahariEiJ_G0019060) #13 Afap1l1 (MGP_PahariEiJ_G0019059) #15 Grpel2 (MGP_PahariEiJ_G0019058) Pcyox1l (MGP_PahariEiJ_G0019057) #16 Il17b (MGP_PahariEiJ_G0019056) #17 Csnk1a1 (MGP_PahariEiJ_G0019055) #19 Arhgef37 (MGP_PahariEiJ_G0019054) #20 Ppargc1b (MGP_PahariEiJ_G0019053) #22 Pde6a (MGP_PahariEiJ_G0019052) #23 Slc26a2 (MGP_PahariEiJ_G0019051) #25 Hmgxb3 (MGP_PahariEiJ_G0019050) #26 Csf1r (MGP_PahariEiJ_G0019049) #27 Pdgfrb (MGP_PahariEiJ_G0019048) #28 Cdx1 (MGP_PahariEiJ_G0019047) #30 Slc6a7 (MGP_PahariEiJ_G0019046) #31 Camk2a (MGP_PahariEiJ_G0019045) #32 Arsi (MGP_PahariEiJ_G0019044) #33 Tcof1 (MGP_PahariEiJ_G0019043) #34 MGP_PahariEiJ_G0019042 #35 Rps14 (MGP_PahariEiJ_G0019041) #36 Ndst1 (MGP_PahariEiJ_G0019040) Synpo (MGP_PahariEiJ_G0019039) Myoz3 (MGP_PahariEiJ_G0019038) Rat MODERN SPECIES 9 Spink13 (ENSRNOG00000038793) Spink7 (ENSRNOG00000032873) #7 LOC102547035 (ENSRNOG00000058091) Fbxo38 (ENSRNOG00000019063) #9 Htr4 (ENSRNOG00000019134) #10 ENSRNOG00000068793 Adrb2 (ENSRNOG00000019217) #11 Sh3tc2 (ENSRNOG00000019305) #12 Ablim3 (ENSRNOG00000019365) #13 Afap1l1 (ENSRNOG00000019403) #15 Grpel2 (ENSRNOG00000064275) Pcyox1l (ENSRNOG00000019643) #16 Il17b (ENSRNOG00000019695) #17 Csnk1a1 (ENSRNOG00000063313) #19 Arhgef37 (ENSRNOG00000025502) #20 Ppargc1b (ENSRNOG00000017503) #22 Pde6a (ENSRNOG00000017816) #23 Slc26a2 (ENSRNOG00000018082) #25 Hmgxb3 (ENSRNOG00000018132) #26 Csf1r (ENSRNOG00000018414) #27 Pdgfrb (ENSRNOG00000018461) #28 Cdx1 (ENSRNOG00000060334) #30 Slc6a7 (ENSRNOG00000018644) #31 Camk2a (ENSRNOG00000018712) #32 Arsi (ENSRNOG00000026060) #33 Tcof1 (ENSRNOG00000026108) #34 Cd74 (ENSRNOG00000018735) #35 Rps14 (ENSRNOG00000018774) #36 Ndst1 (ENSRNOG00000019014) Synpo (ENSRNOG00000019181) Rbm22 (ENSRNOG00000019235) Upper Galilee mountains blind mole rat MODERN SPECIES 1018 Htr4 (ENSNGAG00000017150) #10 Sh3tc2 (ENSNGAG00000018960) #12 ENSNGAG00000020126 ENSNGAG00000020302 Ablim3 (ENSNGAG00000001557) #13 Afap1l1 (ENSNGAG00000009627) #15 ENSNGAG00000011362 Grpel2 (ENSNGAG00000011908) Pcyox1l (ENSNGAG00000012349) #16 Il17b (ENSNGAG00000013221) #17 ENSNGAG00000014437 #19 Arhgef37 (ENSNGAG00000015605) #20 Ppargc1b (ENSNGAG00000016998) #22 Pde6a (ENSNGAG00000019377) #23 Slc26a2 (ENSNGAG00000019650) #25 Lesser Egyptian jerboa MODERN SPECIES 113 Gm36368 (ENSJJAG00000023568) Fbxo38 (ENSJJAG00000002802) #9 Htr4 (ENSJJAG00000017156) #10 ENSJJAG00000020095 ENSJJAG00000017717 Sh3tc2 (ENSJJAG00000018953) #12 Ablim3 (ENSJJAG00000023419) #13 ENSJJAG00000021995 #15 ENSJJAG00000001426 Pcyox1l (ENSJJAG00000010362) #16 Il17b (ENSJJAG00000013607) #17 ENSJJAG00000017594 #19 ENSJJAG00000021433 Arhgef37 (ENSJJAG00000022039) #20 ENSJJAG00000015885 Ppargc1b (ENSJJAG00000018633) #22 ENSJJAG00000019481 Pde6a (ENSJJAG00000003639) #23 Slc26a2 (ENSJJAG00000010661) #25 Hmgxb3 (ENSJJAG00000012795) #26 Csf1r (ENSJJAG00000022296) #27 ENSJJAG00000014141 Pdgfrb (ENSJJAG00000016117) #28 Cdx1 (ENSJJAG00000019049) #30 Slc6a7 (ENSJJAG00000021358) #31 Camk2a (ENSJJAG00000011066) #32 Arsi (ENSJJAG00000002346) #33 ENSJJAG00000005248 ENSJJAG00000009612 Cd74 (ENSJJAG00000011199) #35 Kangaroo rat MODERN SPECIES 404 Gm37797 (ENSDORG00000026147) ENSDORG00000027988 Spink7 (ENSDORG00000015485) #7 Gm36368 (ENSDORG00000025096) Fbxo38 (ENSDORG00000008958) #9 Htr4 (ENSDORG00000011917) #10 ENSDORG00000024403 Sh3tc2 (ENSDORG00000016298) #12 Ablim3 (ENSDORG00000004812) #13 Afap1l1 (ENSDORG00000013435) #15 Grpel2 (ENSDORG00000029163) Pcyox1l (ENSDORG00000011140) #16 Il17b (ENSDORG00000011138) #17 ENSDORG00000011907 #19 Arhgef37 (ENSDORG00000016036) #20 Ppargc1b (ENSDORG00000012605) #22 Pde6a (ENSDORG00000012607) #23 Slc26a2 (ENSDORG00000027006) #25 Hmgxb3 (ENSDORG00000009890) #26 Csf1r (ENSDORG00000009892) #27 Pdgfrb (ENSDORG00000009895) #28 Cdx1 (ENSDORG00000029630) #30 Slc6a7 (ENSDORG00000000014) #31 Camk2a (ENSDORG00000009223) #32 Arsi (ENSDORG00000009222) #33 Cd74 (ENSDORG00000001514) #35 ENSDORG00000007146 #36 Ndst1 (ENSDORG00000016071) Synpo (ENSDORG00000005325) Myoz3 (ENSDORG00000005327) Rbm22 (ENSDORG00000005329) Lagomorpha ANCESTRAL SPECIES 3 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700.`b #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Pika MODERN SPECIES 2403 PPARGC1B (ENSOPRG00000010017) #22 PDE6A (ENSOPRG00000010042) #23 Rabbit MODERN SPECIES 14 SPINK13 (ENSOCUG00000024941) SPINK7 (ENSOCUG00000037791) #7 SPINK9 (ENSOCUG00000029351) #8 FBXO38 (ENSOCUG00000017291) #9 HTR4 (ENSOCUG00000017309) #10 ADRB2 (ENSOCUG00000016088) #11 SH3TC2 (ENSOCUG00000025096) #12 ABLIM3 (ENSOCUG00000016093) #13 AFAP1L1 (ENSOCUG00000016114) #15 ENSOCUG00000016138 PCYOX1L (ENSOCUG00000008337) #16 IL17B (ENSOCUG00000016145) #17 CSNK1A1 (ENSOCUG00000006669) #19 ENSOCUG00000036543 ARHGEF37 (ENSOCUG00000006829) #20 PPARGC1B (ENSOCUG00000013833) #22 PDE6A (ENSOCUG00000013850) #23 SLC26A2 (ENSOCUG00000013871) #25 HMGXB3 (ENSOCUG00000007500) #26 CSF1R (ENSOCUG00000021056) #27 PDGFRB (ENSOCUG00000001725) #28 CDX1 (ENSOCUG00000012479) #30 SLC6A7 (ENSOCUG00000006404) #31 CAMK2A (ENSOCUG00000017865) #32 ARSI (ENSOCUG00000025005) #33 TCOF1 (ENSOCUG00000003848) #34 CD74 (ENSOCUG00000003863) #35 ENSOCUG00000011509 #36 NDST1 (ENSOCUG00000011515) SYNPO (ENSOCUG00000009270) MYOZ3 (ENSOCUG00000013346) Laurasiatheria ANCESTRAL SPECIES 8 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000159769.a.b ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 Eulipotyphla ANCESTRAL SPECIES 1749 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 Hedgehog MODERN SPECIES 4997 PPARGC1B (ENSEEUG00000014903) #22 PDE6A (ENSEEUG00000015079) #23 Laurasiatheria_a ANCESTRAL SPECIES 9 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000159769.a.b ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 Laurasiatheria_b ANCESTRAL SPECIES 9 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000159769.a.b ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 Carnivora ANCESTRAL SPECIES 8 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000159769.a.b ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 Caniformia ANCESTRAL SPECIES 5 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00940000165187 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000159769.a.b ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 Canidae ANCESTRAL SPECIES 7 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00940000165187 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000159769.a.b ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 Canis_lupus ANCESTRAL SPECIES 12 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00940000165308 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00940000165187 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000159769.a.b ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00950000185035.b ENSGT00390000000703.h.lb.a #36 Dog MODERN SPECIES 32 GZMK (ENSCAFG00845011436) ENSCAFG00845011407 SPINK7 (ENSCAFG00845011376) #7 SPINK9 (ENSCAFG00845011276) #8 ENSCAFG00845011221 FBXO38 (ENSCAFG00845010983) #9 HTR4 (ENSCAFG00845010692) #10 ADRB2 (ENSCAFG00845010580) #11 SH3TC2 (ENSCAFG00845010410) #12 ABLIM3 (ENSCAFG00845010075) #13 AFAP1L1 (ENSCAFG00845009783) #15 PCYOX1L (ENSCAFG00845009623) #16 IL17B (ENSCAFG00845009566) #17 CSNK1A1 (ENSCAFG00845009382) #19 ARHGEF37 (ENSCAFG00845009298) #20 PPARGC1B (ENSCAFG00845009130) #22 PDE6A (ENSCAFG00845008935) #23 SLC26A2 (ENSCAFG00845008861) #25 HMGXB3 (ENSCAFG00845008592) #26 CSF1R (ENSCAFG00845008395) #27 PDGFRB (ENSCAFG00845008241) #28 CDX1 (ENSCAFG00845008164) #30 SLC6A7 (ENSCAFG00845008088) #31 CAMK2A (ENSCAFG00845007828) #32 ARSI (ENSCAFG00845007705) #33 TCOF1 (ENSCAFG00845007250) #34 CD74 (ENSCAFG00845006874) #35 ENSCAFG00845006810 RPS14 (ENSCAFG00845006753) #36 NDST1 (ENSCAFG00845006610) SYNPO (ENSCAFG00845006489) Dingo MODERN SPECIES 324 ESM1 (ENSCAFG00020023350) GZMK (ENSCAFG00020023353) SPINK7 (ENSCAFG00020023362) #7 FBXO38 (ENSCAFG00020023380) #9 HTR4 (ENSCAFG00020023454) #10 ADRB2 (ENSCAFG00020023459) #11 SH3TC2 (ENSCAFG00020023464) #12 ENSCAFG00020023475 ABLIM3 (ENSCAFG00020023480) #13 AFAP1L1 (ENSCAFG00020023491) #15 GRPEL2 (ENSCAFG00020023496) PCYOX1L (ENSCAFG00020023499) #16 IL17B (ENSCAFG00020023501) #17 CSNK1A1 (ENSCAFG00020023507) #19 ARHGEF37 (ENSCAFG00020023512) #20 PPARGC1B (ENSCAFG00020023524) #22 PDE6A (ENSCAFG00020023546) #23 SLC26A2 (ENSCAFG00020023581) #25 TIGD6 (ENSCAFG00020023582) HMGXB3 (ENSCAFG00020023583) #26 CSF1R (ENSCAFG00020023585) #27 PDGFRB (ENSCAFG00020023594) #28 CDX1 (ENSCAFG00020023603) #30 SLC6A7 (ENSCAFG00020023615) #31 ENSCAFG00020023616 CAMK2A (ENSCAFG00020023618) #32 ARSI (ENSCAFG00020023634) #33 TCOF1 (ENSCAFG00020023637) #34 CD74 (ENSCAFG00020023646) #35 ENSCAFG00020023654 ENSCAFG00020023657 #36 Red fox MODERN SPECIES 2 ENSVVUG00000014599 SPINK7 (ENSVVUG00000014584) #7 SPINK9 (ENSVVUG00000014579) #8 FBXO38 (ENSVVUG00000014567) #9 HTR4 (ENSVVUG00000014538) #10 ADRB2 (ENSVVUG00000014517) #11 SH3TC2 (ENSVVUG00000014444) #12 ENSVVUG00000014427 ABLIM3 (ENSVVUG00000014418) #13 AFAP1L1 (ENSVVUG00000014410) #15 GRPEL2 (ENSVVUG00000014408) PCYOX1L (ENSVVUG00000014404) #16 IL17B (ENSVVUG00000014402) #17 CSNK1A1 (ENSVVUG00000014391) #19 ARHGEF37 (ENSVVUG00000014383) #20 PPARGC1B (ENSVVUG00000014358) #22 PDE6A (ENSVVUG00000007855) #23 SLC26A2 (ENSVVUG00000007543) #25 TIGD6 (ENSVVUG00000007540) HMGXB3 (ENSVVUG00000007485) #26 CSF1R (ENSVVUG00000007458) #27 PDGFRB (ENSVVUG00000007442) #28 ENSVVUG00000007438 #30 SLC6A7 (ENSVVUG00000007422) #31 CAMK2A (ENSVVUG00000007418) #32 ARSI (ENSVVUG00000007357) #33 TCOF1 (ENSVVUG00000007298) #34 CD74 (ENSVVUG00000007268) #35 RPS14 (ENSVVUG00000007262) #36 NDST1 (ENSVVUG00000007251) SYNPO (ENSVVUG00000007230) Caniformia_b ANCESTRAL SPECIES 4 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00940000165187 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000159769.a.b ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 Mustelinae ANCESTRAL SPECIES 13 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00860000135710 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00940000165187 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Ferret MODERN SPECIES 162 ENSMPUG00000014307 ENSMPUG00000014304 FBXO38 (ENSMPUG00000014300) #9 HTR4 (ENSMPUG00000014297) #10 ENSMPUG00000014294 ADRB2 (ENSMPUG00000014292) #11 SH3TC2 (ENSMPUG00000014283) #12 ENSMPUG00000014282 ABLIM3 (ENSMPUG00000014280) #13 AFAP1L1 (ENSMPUG00000014272) #15 GRPEL2 (ENSMPUG00000014268) PCYOX1L (ENSMPUG00000014263) #16 IL17B (ENSMPUG00000014258) #17 CSNK1A1 (ENSMPUG00000014255) #19 ARHGEF37 (ENSMPUG00000014249) #20 PPARGC1B (ENSMPUG00000014245) #22 PDE6A (ENSMPUG00000014122) #23 SLC26A2 (ENSMPUG00000014113) #25 TIGD6 (ENSMPUG00000019320) HMGXB3 (ENSMPUG00000014009) #26 CSF1R (ENSMPUG00000013999) #27 PDGFRB (ENSMPUG00000013990) #28 CDX1 (ENSMPUG00000013978) #30 SLC6A7 (ENSMPUG00000013975) #31 CAMK2A (ENSMPUG00000013844) #32 ARSI (ENSMPUG00000013841) #33 ENSMPUG00000013791 #34 CD74 (ENSMPUG00000013786) #35 ENSMPUG00000013776 #36 NDST1 (ENSMPUG00000013771) SYNPO (ENSMPUG00000013767) American mink MODERN SPECIES 18 ENSNVIG00000002339 SPINK7 (ENSNVIG00000002330) #7 ENSNVIG00000002321 FBXO38 (ENSNVIG00000002255) #9 HTR4 (ENSNVIG00000002194) #10 ADRB2 (ENSNVIG00000002179) #11 SH3TC2 (ENSNVIG00000002135) #12 ENSNVIG00000002115 ABLIM3 (ENSNVIG00000001879) #13 AFAP1L1 (ENSNVIG00000001811) #15 GRPEL2 (ENSNVIG00000001766) PCYOX1L (ENSNVIG00000001740) #16 IL17B (ENSNVIG00000001722) #17 CSNK1A1 (ENSNVIG00000001545) #19 ARHGEF37 (ENSNVIG00000001518) #20 PPARGC1B (ENSNVIG00000001480) #22 PDE6A (ENSNVIG00000001368) #23 SLC26A2 (ENSNVIG00000001354) #25 TIGD6 (ENSNVIG00000001345) HMGXB3 (ENSNVIG00000001274) #26 CSF1R (ENSNVIG00000001216) #27 PDGFRB (ENSNVIG00000001164) #28 CDX1 (ENSNVIG00000001149) #30 SLC6A7 (ENSNVIG00000001070) #31 CAMK2A (ENSNVIG00000001006) #32 ARSI (ENSNVIG00000000989) #33 TCOF1 (ENSNVIG00000000370) #34 CD74 (ENSNVIG00000000261) #35 ENSNVIG00000000207 #36 NDST1 (ENSNVIG00000000103) SYNPO (ENSNVIG00000000070) Ursidae ANCESTRAL SPECIES 24 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00940000165308 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b.d #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00910000147883 ENSGT00940000160823 #31 ENSGT00940000159769.a.b ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961.h #35 ENSGT00390000000703.h #36 Giant Panda MODERN SPECIES 13 ENSAMEG00000019196 SPINK7 (ENSAMEG00000024511) #7 SPINK9 (ENSAMEG00000031483) #8 FBXO38 (ENSAMEG00000001149) #9 HTR4 (ENSAMEG00000001144) #10 ADRB2 (ENSAMEG00000020122) #11 SH3TC2 (ENSAMEG00000005533) #12 ENSAMEG00000028219 ABLIM3 (ENSAMEG00000005476) #13 AFAP1L1 (ENSAMEG00000005448) #15 GRPEL2 (ENSAMEG00000029514) PCYOX1L (ENSAMEG00000005410) #16 IL17B (ENSAMEG00000027431) #17 CSNK1A1 (ENSAMEG00000005335) #19 ARHGEF37 (ENSAMEG00000005310) #20 PPARGC1B (ENSAMEG00000005287) #22 PDE6A (ENSAMEG00000005215) #23 SLC26A2 (ENSAMEG00000005206) #25 TIGD6 (ENSAMEG00000020121) HMGXB3 (ENSAMEG00000005161) #26 CSF1R (ENSAMEG00000005060) #27 PDGFRB (ENSAMEG00000004961) #28 CDX1 (ENSAMEG00000031327) #30 ENSAMEG00000028629 SLC6A7 (ENSAMEG00000004844) #31 CAMK2A (ENSAMEG00000026130) #32 ARSI (ENSAMEG00000004746) #33 TCOF1 (ENSAMEG00000004673) #34 RPS14 (ENSAMEG00000004654) #35 NDST1 (ENSAMEG00000004600) SYNPO (ENSAMEG00000004592) Ursus ANCESTRAL SPECIES 10 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00940000166334 ENSGT00940000165308 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b.d #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a.c #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000159769.a.b ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961.h #35 ENSGT00390000000703.h #36 ENSGT00940000157857 Polar bear MODERN SPECIES 179 GZMK (ENSUMAG00000005679) SPINK7 (ENSUMAG00000005677) #7 SPINK9 (ENSUMAG00000005675) #8 ENSUMAG00000005667 FBXO38 (ENSUMAG00000005518) #9 HTR4 (ENSUMAG00000005494) #10 ADRB2 (ENSUMAG00000005490) #11 SH3TC2 (ENSUMAG00000005460) #12 ABLIM3 (ENSUMAG00000005443) #13 AFAP1L1 (ENSUMAG00000005437) #15 GRPEL2 (ENSUMAG00000005433) PCYOX1L (ENSUMAG00000005426) #16 IL17B (ENSUMAG00000005420) #17 CSNK1A1 (ENSUMAG00000005410) #19 ARHGEF37 (ENSUMAG00000005379) #20 PPARGC1B (ENSUMAG00000005361) #22 PDE6A (ENSUMAG00000004883) #23 SLC26A2 (ENSUMAG00000004796) #25 TIGD6 (ENSUMAG00000004793) HMGXB3 (ENSUMAG00000004789) #26 CSF1R (ENSUMAG00000004783) #27 PDGFRB (ENSUMAG00000004358) #28 SLC6A7 (ENSUMAG00000004279) #31 ENSUMAG00000004228 ENSUMAG00000004106 #32 ARSI (ENSUMAG00000004091) #33 TCOF1 (ENSUMAG00000004013) #34 CD74 (ENSUMAG00000003979) #35 RPS14 (ENSUMAG00000003973) #36 NDST1 (ENSUMAG00000003729) SYNPO (ENSUMAG00000003679) Felidae ANCESTRAL SPECIES 6 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Cat MODERN SPECIES SPINK13 (ENSFCAG00000041823) SPINK7 (ENSFCAG00000038097) #7 SPINK9 (ENSFCAG00000035030) #8 ENSFCAG00000047904 FBXO38 (ENSFCAG00000006106) #9 HTR4 (ENSFCAG00000009931) #10 ADRB2 (ENSFCAG00000007954) #11 SH3TC2 (ENSFCAG00000007955) #12 ABLIM3 (ENSFCAG00000003622) #13 AFAP1L1 (ENSFCAG00000003623) #15 GRPEL2 (ENSFCAG00000045597) PCYOX1L (ENSFCAG00000003625) #16 IL17B (ENSFCAG00000003626) #17 CSNK1A1 (ENSFCAG00000031849) #19 ARHGEF37 (ENSFCAG00000003628) #20 PPARGC1B (ENSFCAG00000003629) #22 PDE6A (ENSFCAG00000003630) #23 SLC26A2 (ENSFCAG00000026045) #25 TIGD6 (ENSFCAG00000024582) HMGXB3 (ENSFCAG00000003632) #26 CSF1R (ENSFCAG00000003633) #27 PDGFRB (ENSFCAG00000003634) #28 CDX1 (ENSFCAG00000022723) #30 SLC6A7 (ENSFCAG00000024714) #31 ARSI (ENSFCAG00000024271) #33 TCOF1 (ENSFCAG00000025754) #34 CAMK2A (ENSFCAG00000003635) #32 NDST1 (ENSFCAG00000002041) SYNPO (ENSFCAG00000002043) MYOZ3 (ENSFCAG00000013867) RBM22 (ENSFCAG00000018845) Panthera ANCESTRAL SPECIES 6 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Tiger MODERN SPECIES 422 CSNK1A1 (ENSPTIG00000021579) #19 ARHGEF37 (ENSPTIG00000006596) #20 PPARGC1B (ENSPTIG00000007391) #22 PDE6A (ENSPTIG00000011759) #23 SLC26A2 (ENSPTIG00000016543) #25 TIGD6 (ENSPTIG00000006085) HMGXB3 (ENSPTIG00000017751) #26 CSF1R (ENSPTIG00000019258) #27 PDGFRB (ENSPTIG00000006696) #28 ENSPTIG00000010717 #30 SLC6A7 (ENSPTIG00000011219) #31 CAMK2A (ENSPTIG00000013660) #32 ARSI (ENSPTIG00000006313) #33 CD74 (ENSPTIG00000015808) #35 RPS14 (ENSPTIG00000015980) #36 NDST1 (ENSPTIG00000016596) SYNPO (ENSPTIG00000018778) MYOZ3 (ENSPTIG00000019243) Panthera_a ANCESTRAL SPECIES 3 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b leopard MODERN SPECIES 44 SPINK7 (ENSPPRG00000007094) #7 ENSPPRG00000006706 #8 FBXO38 (ENSPPRG00000005614) #9 HTR4 (ENSPPRG00000004837) #10 ENSPPRG00000003920 #11 ENSPPRG00000003693 #11 SH3TC2 (ENSPPRG00000003501) #12 ABLIM3 (ENSPPRG00000001965) #13 AFAP1L1 (ENSPPRG00000011153) #15 GRPEL2 (ENSPPRG00000009018) PCYOX1L (ENSPPRG00000008748) #16 IL17B (ENSPPRG00000008266) #17 ENSPPRG00000008114 CSNK1A1 (ENSPPRG00000007912) #19 ARHGEF37 (ENSPPRG00000005780) #20 PPARGC1B (ENSPPRG00000004608) #22 PDE6A (ENSPPRG00000002126) #23 SLC26A2 (ENSPPRG00000022664) #25 TIGD6 (ENSPPRG00000015925) HMGXB3 (ENSPPRG00000023078) #26 CSF1R (ENSPPRG00000017326) #27 PDGFRB (ENSPPRG00000014021) #28 ENSPPRG00000012982 #30 SLC6A7 (ENSPPRG00000012765) #31 CAMK2A (ENSPPRG00000011243) #32 ARSI (ENSPPRG00000009868) #33 CD74 (ENSPPRG00000022361) #35 RPS14 (ENSPPRG00000015556) #36 NDST1 (ENSPPRG00000013968) SYNPO (ENSPPRG00000012666) MYOZ3 (ENSPPRG00000012072) lion MODERN SPECIES ENSPLOG00000001587 SPINK13 (ENSPLOG00000001600) SPINK7 (ENSPLOG00000001613) #7 SPINK9 (ENSPLOG00000001627) #8 FBXO38 (ENSPLOG00000001656) #9 HTR4 (ENSPLOG00000001716) #10 ADRB2 (ENSPLOG00000001745) #11 SH3TC2 (ENSPLOG00000001760) #12 ABLIM3 (ENSPLOG00000001844) #13 AFAP1L1 (ENSPLOG00000002014) #15 GRPEL2 (ENSPLOG00000002072) PCYOX1L (ENSPLOG00000002086) #16 IL17B (ENSPLOG00000002102) #17 CSNK1A1 (ENSPLOG00000002155) #19 ARHGEF37 (ENSPLOG00000002246) #20 PPARGC1B (ENSPLOG00000002296) #22 PDE6A (ENSPLOG00000002368) #23 SLC26A2 (ENSPLOG00000002429) #25 TIGD6 (ENSPLOG00000002441) HMGXB3 (ENSPLOG00000002456) #26 CSF1R (ENSPLOG00000002499) #27 PDGFRB (ENSPLOG00000002606) #28 CDX1 (ENSPLOG00000002644) #30 SLC6A7 (ENSPLOG00000002663) #31 CAMK2A (ENSPLOG00000002802) #32 ARSI (ENSPLOG00000003058) #33 TCOF1 (ENSPLOG00000003215) #34 CD74 (ENSPLOG00000003458) #35 RPS14 (ENSPLOG00000003476) #36 NDST1 (ENSPLOG00000003497) SYNPO (ENSPLOG00000003528) Laurasiatheria_c ANCESTRAL SPECIES 7 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Equus ANCESTRAL SPECIES 6 ENSGT00940000165308.g.b.a.b ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Horse MODERN SPECIES 5 ENSECAG00000037084 ENSECAG00000028172 SPINK7 (ENSECAG00000034028) #7 SPINK9 (ENSECAG00000036703) #8 FBXO38 (ENSECAG00000016193) #9 HTR4 (ENSECAG00000013365) #10 ADRB2 (ENSECAG00000004810) #11 SH3TC2 (ENSECAG00000009311) #12 ABLIM3 (ENSECAG00000016129) #13 AFAP1L1 (ENSECAG00000010738) #15 GRPEL2 (ENSECAG00000009449) PCYOX1L (ENSECAG00000007083) #16 IL17B (ENSECAG00000006456) #17 CSNK1A1 (ENSECAG00000004882) #19 ARHGEF37 (ENSECAG00000022738) #20 PPARGC1B (ENSECAG00000019769) #22 PDE6A (ENSECAG00000024028) #23 SLC26A2 (ENSECAG00000023363) #25 TIGD6 (ENSECAG00000004664) HMGXB3 (ENSECAG00000015743) #26 CSF1R (ENSECAG00000000860) #27 PDGFRB (ENSECAG00000024793) #28 CDX1 (ENSECAG00000024772) #30 SLC6A7 (ENSECAG00000011225) #31 CAMK2A (ENSECAG00000019790) #32 ARSI (ENSECAG00000004586) #33 TCOF1 (ENSECAG00000014261) #34 CD74 (ENSECAG00000008503) #35 RPS14 (ENSECAG00000024336) #36 NDST1 (ENSECAG00000017361) SYNPO (ENSECAG00000017352) Donkey MODERN SPECIES 29 ENSEASG00005024880 ENSEASG00005027718 SPINK7 (ENSEASG00005031369) #7 SPINK9 (ENSEASG00005026461) #8 FBXO38 (ENSEASG00005002952) #9 HTR4 (ENSEASG00005002941) #10 ADRB2 (ENSEASG00005035523) #11 SH3TC2 (ENSEASG00005002925) #12 ABLIM3 (ENSEASG00005002886) #13 AFAP1L1 (ENSEASG00005002876) #15 GRPEL2 (ENSEASG00005029186) PCYOX1L (ENSEASG00005002869) #16 IL17B (ENSEASG00005034663) #17 CSNK1A1 (ENSEASG00005002855) #19 ARHGEF37 (ENSEASG00005002843) #20 PPARGC1B (ENSEASG00005002826) #22 PDE6A (ENSEASG00005002786) #23 SLC26A2 (ENSEASG00005002777) #25 TIGD6 (ENSEASG00005034038) HMGXB3 (ENSEASG00005002772) #26 CSF1R (ENSEASG00005002767) #27 PDGFRB (ENSEASG00005002763) #28 CDX1 (ENSEASG00005002759) #30 SLC6A7 (ENSEASG00005002754) #31 CAMK2A (ENSEASG00005002750) #32 ARSI (ENSEASG00005002748) #33 TCOF1 (ENSEASG00005002741) #34 CD74 (ENSEASG00005002735) #35 ENSEASG00005002733 #36 NDST1 (ENSEASG00005002728) SYNPO (ENSEASG00005002726) Chiroptera ANCESTRAL SPECIES 1 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT01080000259604 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Megabat MODERN SPECIES 1530 PPARGC1B (ENSPVAG00000001308) #22 PDE6A (ENSPVAG00000001309) #23 SLC26A2 (ENSPVAG00000001310) #25 TIGD6 (ENSPVAG00000001311) HMGXB3 (ENSPVAG00000001312) #26 CSF1R (ENSPVAG00000001313) #27 PDGFRB (ENSPVAG00000001314) #28 CDX1 (ENSPVAG00000001315) #30 SLC6A7 (ENSPVAG00000001316) #31 Microchiroptera ANCESTRAL SPECIES 3 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT01080000259604 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Microbat MODERN SPECIES 1139 ENSMLUG00000025288 SPINK13 (ENSMLUG00000027219) ENSMLUG00000022200 #7 ENSMLUG00000029877 #7 FBXO38 (ENSMLUG00000013064) #9 HTR4 (ENSMLUG00000003382) #10 ADRB2 (ENSMLUG00000006314) #11 SH3TC2 (ENSMLUG00000010270) #12 ABLIM3 (ENSMLUG00000001706) #13 AFAP1L1 (ENSMLUG00000002902) #15 GRPEL2 (ENSMLUG00000029499) PCYOX1L (ENSMLUG00000030590) #16 IL17B (ENSMLUG00000002907) #17 ENSMLUG00000002910 #19 ARHGEF37 (ENSMLUG00000012793) #20 PPARGC1B (ENSMLUG00000013169) #22 Greater horseshoe bat MODERN SPECIES 16 ENSRFEG00010010974 SPINK13 (ENSRFEG00010011013) SPINK7 (ENSRFEG00010011127) #7 ENSRFEG00010011193 FBXO38 (ENSRFEG00010011244) #9 HTR4 (ENSRFEG00010011375) #10 ADRB2 (ENSRFEG00010011504) #11 SH3TC2 (ENSRFEG00010011549) #12 ABLIM3 (ENSRFEG00010012097) #13 AFAP1L1 (ENSRFEG00010012253) #15 GRPEL2 (ENSRFEG00010012346) ENSRFEG00010012425 #16 IL17B (ENSRFEG00010012496) #17 CSNK1A1 (ENSRFEG00010012571) #19 ARHGEF37 (ENSRFEG00010012691) #20 PPARGC1B (ENSRFEG00010012783) #22 PDE6A (ENSRFEG00010012866) #23 SLC26A2 (ENSRFEG00010013454) #25 HMGXB3 (ENSRFEG00010013671) #26 CSF1R (ENSRFEG00010013869) #27 PDGFRB (ENSRFEG00010013950) #28 CDX1 (ENSRFEG00010014033) #30 SLC6A7 (ENSRFEG00010014080) #31 CAMK2A (ENSRFEG00010014294) #32 ARSI (ENSRFEG00010014388) #33 TCOF1 (ENSRFEG00010014446) #34 CD74 (ENSRFEG00010014522) #35 RPS14 (ENSRFEG00010014582) #36 NDST1 (ENSRFEG00010014641) SYNPO (ENSRFEG00010014778) MYOZ3 (ENSRFEG00010013242) Artiodactyla ANCESTRAL SPECIES 8 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Suina ANCESTRAL SPECIES 11 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Pig MODERN SPECIES 10 SPINK7 (ENSSSCG00000054392) #7 ENSSSCG00000061955 SPINK9 (ENSSSCG00000014426) #8 FBXO38 (ENSSSCG00000014427) #9 HTR4 (ENSSSCG00000014428) #10 ADRB2 (ENSSSCG00000052586) #11 SH3TC2 (ENSSSCG00000023279) #12 ABLIM3 (ENSSSCG00000014430) #13 AFAP1L1 (ENSSSCG00000014431) #15 GRPEL2 (ENSSSCG00000014432) PCYOX1L (ENSSSCG00000014433) #16 IL17B (ENSSSCG00000014434) #17 ENSSSCG00000032383 CSNK1A1 (ENSSSCG00000014435) #19 ARHGEF37 (ENSSSCG00000014436) #20 PPARGC1B (ENSSSCG00000014437) #22 PDE6A (ENSSSCG00000014438) #23 SLC26A2 (ENSSSCG00000039045) #25 HMGXB3 (ENSSSCG00000014440) #26 CSF1R (ENSSSCG00000014441) #27 PDGFRB (ENSSSCG00000022741) #28 CDX1 (ENSSSCG00000060480) #30 SLC6A7 (ENSSSCG00000014447) #31 CAMK2A (ENSSSCG00000014443) #32 ARSI (ENSSSCG00000014448) #33 TCOF1 (ENSSSCG00000014450) #34 CD74 (ENSSSCG00000033262) #35 RPS14 (ENSSSCG00000054578) #36 NDST1 (ENSSSCG00000032731) SYNPO (ENSSSCG00000038453) MYOZ3 (ENSSSCG00000035729) Chacoan peccary MODERN SPECIES 912 ENSCWAG00000004038 SPINK13 (ENSCWAG00000004078) SPINK7 (ENSCWAG00000004155) #7 SPINK9 (ENSCWAG00000004188) #8 FBXO38 (ENSCWAG00000004229) #9 HTR4 (ENSCWAG00000004339) #10 ADRB2 (ENSCWAG00000004475) #11 SH3TC2 (ENSCWAG00000004496) #12 ABLIM3 (ENSCWAG00000004703) #13 AFAP1L1 (ENSCWAG00000005442) #15 GRPEL2 (ENSCWAG00000005612) PCYOX1L (ENSCWAG00000005628) #16 IL17B (ENSCWAG00000005656) #17 CSNK1A1 (ENSCWAG00000005716) #19 ARHGEF37 (ENSCWAG00000005846) #20 PPARGC1B (ENSCWAG00000005883) #22 PDE6A (ENSCWAG00000005987) #23 SLC26A2 (ENSCWAG00000006207) #25 HMGXB3 (ENSCWAG00000006248) #26 ENSCWAG00000006349 #27 ENSCWAG00000006378 #27 PDGFRB (ENSCWAG00000006419) #28 CDX1 (ENSCWAG00000006455) #30 SLC6A7 (ENSCWAG00000006482) #31 CAMK2A (ENSCWAG00000006565) #32 Artiodactyla_a ANCESTRAL SPECIES 7 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Camelidae ANCESTRAL SPECIES 1 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00940000165308 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Arabian camel MODERN SPECIES 22 SPINK13 (ENSCDRG00005003321) SPINK7 (ENSCDRG00005003303) #7 SPINK9 (ENSCDRG00005003292) #8 ENSCDRG00005003281 FBXO38 (ENSCDRG00005003249) #9 HTR4 (ENSCDRG00005003218) #10 ADRB2 (ENSCDRG00005003202) #11 SH3TC2 (ENSCDRG00005003129) #12 ABLIM3 (ENSCDRG00005003081) #13 AFAP1L1 (ENSCDRG00005003036) #15 GRPEL2 (ENSCDRG00005003018) PCYOX1L (ENSCDRG00005003002) #16 IL17B (ENSCDRG00005002983) #17 ENSCDRG00005002711 #19 ARHGEF37 (ENSCDRG00005002648) #20 PPARGC1B (ENSCDRG00005002597) #22 PDE6A (ENSCDRG00005002480) #23 SLC26A2 (ENSCDRG00005002437) #25 TIGD6 (ENSCDRG00005002431) HMGXB3 (ENSCDRG00005002388) #26 CSF1R (ENSCDRG00005002338) #27 PDGFRB (ENSCDRG00005002306) #28 CDX1 (ENSCDRG00005002290) #30 SLC6A7 (ENSCDRG00005002268) #31 CAMK2A (ENSCDRG00005002212) #32 ARSI (ENSCDRG00005002191) #33 TCOF1 (ENSCDRG00005002111) #34 CD74 (ENSCDRG00005002071) #35 RPS14 (ENSCDRG00005002058) #36 NDST1 (ENSCDRG00005002048) SYNPO (ENSCDRG00005002038) Artiodactyla_b ANCESTRAL SPECIES 8 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Cetacea ANCESTRAL SPECIES 1 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00950000182965.a.b.b.a ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.k.a ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.tb #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Odontoceti ANCESTRAL SPECIES 1 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00950000182965.a.b.b.a ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.k.a ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.tb #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Odontoceti_a ANCESTRAL SPECIES 1 ENSGT00530000064225 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.k.a ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.tb #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Odontoceti_b ANCESTRAL SPECIES 1 ENSGT00530000064225 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.k.a ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.tb #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Monodontidae ANCESTRAL SPECIES 7 ENSGT00530000064225 ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.k.a ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.tb #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Narwhal MODERN SPECIES 298 SPINK6 (ENSMMNG00015000740) ENSMMNG00015000765 SPINK13 (ENSMMNG00015000781) SPINK7 (ENSMMNG00015000804) #7 FBXO38 (ENSMMNG00015000846) #9 HTR4 (ENSMMNG00015000986) #10 ADRB2 (ENSMMNG00015001090) #11 SH3TC2 (ENSMMNG00015001111) #12 ABLIM3 (ENSMMNG00015001180) #13 AFAP1L1 (ENSMMNG00015001296) #15 ENSMMNG00015001433 PCYOX1L (ENSMMNG00015001461) #16 IL17B (ENSMMNG00015001496) #17 CSNK1A1 (ENSMMNG00015001586) #19 ARHGEF37 (ENSMMNG00015001691) #20 PPARGC1B (ENSMMNG00015001754) #22 PDE6A (ENSMMNG00015001823) #23 SLC26A2 (ENSMMNG00015001926) #25 HMGXB3 (ENSMMNG00015001971) #26 CSF1R (ENSMMNG00015002039) #27 PDGFRB (ENSMMNG00015002105) #28 CDX1 (ENSMMNG00015002198) #30 SLC6A7 (ENSMMNG00015002220) #31 CAMK2A (ENSMMNG00015002266) #32 ARSI (ENSMMNG00015002304) #33 TCOF1 (ENSMMNG00015002369) #34 CD74 (ENSMMNG00015002514) #35 RPS14 (ENSMMNG00015002549) #36 NDST1 (ENSMMNG00015002590) SYNPO (ENSMMNG00015002633) MYOZ3 (ENSMMNG00015002653) Beluga whale MODERN SPECIES 34 CUNH5orf46 (ENSDLEG00000003615) SPINK5 (ENSDLEG00000003623) ENSDLEG00000003637 ENSDLEG00000003646 FBXO38 (ENSDLEG00000003654) #9 HTR4 (ENSDLEG00000003669) #10 SH3TC2 (ENSDLEG00000003686) #12 ADRB2 (ENSDLEG00000003724) #11 ABLIM3 (ENSDLEG00000003752) #13 AFAP1L1 (ENSDLEG00000003846) #15 GRPEL2 (ENSDLEG00000003935) PCYOX1L (ENSDLEG00000003965) #16 IL17B (ENSDLEG00000003971) #17 CSNK1A1 (ENSDLEG00000003984) #19 ARHGEF37 (ENSDLEG00000003999) #20 PPARGC1B (ENSDLEG00000004020) #22 PDE6A (ENSDLEG00000004080) #23 SLC26A2 (ENSDLEG00000004278) #25 HMGXB3 (ENSDLEG00000004299) #26 CSF1R (ENSDLEG00000004672) #27 PDGFRB (ENSDLEG00000004691) #28 CDX1 (ENSDLEG00000004703) #30 SLC6A7 (ENSDLEG00000004710) #31 CAMK2A (ENSDLEG00000004732) #32 ARSI (ENSDLEG00000004761) #33 TCOF1 (ENSDLEG00000004784) #34 CD74 (ENSDLEG00000004841) #35 RPS14 (ENSDLEG00000004853) #36 NDST1 (ENSDLEG00000004880) SYNPO (ENSDLEG00000004897) MYOZ3 (ENSDLEG00000004899) Vaquita MODERN SPECIES 14 ENSPSNG00000000317 SPINK6 (ENSPSNG00000000297) SPINK13 (ENSPSNG00000000253) SPINK7 (ENSPSNG00000000221) #7 FBXO38 (ENSPSNG00000000192) #9 HTR4 (ENSPSNG00000000133) #10 ADRB2 (ENSPSNG00000019879) #11 SH3TC2 (ENSPSNG00000019837) #12 ABLIM3 (ENSPSNG00000019641) #13 AFAP1L1 (ENSPSNG00000019557) #15 GRPEL2 (ENSPSNG00000019509) PCYOX1L (ENSPSNG00000019459) #16 IL17B (ENSPSNG00000019415) #17 CSNK1A1 (ENSPSNG00000019268) #19 ARHGEF37 (ENSPSNG00000019187) #20 PPARGC1B (ENSPSNG00000019085) #22 PDE6A (ENSPSNG00000018694) #23 SLC26A2 (ENSPSNG00000018617) #25 TIGD6 (ENSPSNG00000018522) HMGXB3 (ENSPSNG00000018442) #26 CSF1R (ENSPSNG00000018376) #27 PDGFRB (ENSPSNG00000018303) #28 CDX1 (ENSPSNG00000018239) #30 SLC6A7 (ENSPSNG00000018104) #31 CAMK2A (ENSPSNG00000017048) #32 ARSI (ENSPSNG00000016936) #33 TCOF1 (ENSPSNG00000016692) #34 CD74 (ENSPSNG00000016586) #35 ENSPSNG00000016534 #36 NDST1 (ENSPSNG00000016433) SYNPO (ENSPSNG00000016365) Dolphin MODERN SPECIES 1751 ADRB2 (ENSTTRG00000008381) #11 SH3TC2 (ENSTTRG00000008382) #12 ABLIM3 (ENSTTRG00000008384) #13 AFAP1L1 (ENSTTRG00000008394) #15 GRPEL2 (ENSTTRG00000008406) PCYOX1L (ENSTTRG00000008409) #16 IL17B (ENSTTRG00000008419) #17 CSNK1A1 (ENSTTRG00000008420) #19 ARHGEF37 (ENSTTRG00000008422) #20 PPARGC1B (ENSTTRG00000008430) #22 PDE6A (ENSTTRG00000008434) #23 SLC26A2 (ENSTTRG00000008441) #25 HMGXB3 (ENSTTRG00000008445) #26 CSF1R (ENSTTRG00000008450) #27 Sperm whale MODERN SPECIES 111 PPARGC1B (ENSPCTG00005015662) #22 Blue whale MODERN SPECIES 14 SPINK6 (ENSBMSG00010000377) ENSBMSG00010000399 SPINK13 (ENSBMSG00010000418) SPINK7 (ENSBMSG00010000439) #7 FBXO38 (ENSBMSG00010000482) #9 HTR4 (ENSBMSG00010000543) #10 ADRB2 (ENSBMSG00010000651) #11 SH3TC2 (ENSBMSG00010000673) #12 ABLIM3 (ENSBMSG00010000753) #13 AFAP1L1 (ENSBMSG00010000816) #15 ENSBMSG00010000880 PCYOX1L (ENSBMSG00010000893) #16 IL17B (ENSBMSG00010000910) #17 CSNK1A1 (ENSBMSG00010000981) #19 ARHGEF37 (ENSBMSG00010001077) #20 PPARGC1B (ENSBMSG00010001147) #22 PDE6A (ENSBMSG00010001237) #23 SLC26A2 (ENSBMSG00010001309) #25 TIGD6 (ENSBMSG00010001323) HMGXB3 (ENSBMSG00010001346) #26 CSF1R (ENSBMSG00010001379) #27 ENSBMSG00010001419 PDGFRB (ENSBMSG00010001441) #28 CDX1 (ENSBMSG00010001462) #30 SLC6A7 (ENSBMSG00010001480) #31 CAMK2A (ENSBMSG00010001552) #32 ARSI (ENSBMSG00010002055) #33 TCOF1 (ENSBMSG00010002122) #34 CD74 (ENSBMSG00010002205) #35 ENSBMSG00010002223 #36 NDST1 (ENSBMSG00010002246) Pecora ANCESTRAL SPECIES ENSGT00940000165308 ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700.ub.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.wb.b #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Percora_a ANCESTRAL SPECIES ENSGT00940000165308.c.a ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700.ub.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.wb.b #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Bovidae ANCESTRAL SPECIES ENSGT00940000165308.c.a ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700.ub.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.wb.b #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Bovinae ANCESTRAL SPECIES 2 ENSGT00940000165308.c.a ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.i ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700.ub.a.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.wb.b #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Bos ANCESTRAL SPECIES 3 ENSGT00940000165308.c.a ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.i ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700.ub.a.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.wb.b #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Bos_a ANCESTRAL SPECIES 2 ENSGT00940000165308.c.a ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.i ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700.ub.a.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.wb.b #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Domestic yak MODERN SPECIES 27 ENSBGRG00000017256 SPINK13 (ENSBGRG00000017334) SPINK7 (ENSBGRG00000017405) #7 SPINK9 (ENSBGRG00000017477) #8 FBXO38 (ENSBGRG00000017630) #9 HTR4 (ENSBGRG00000018072) #10 ADRB2 (ENSBGRG00000018281) #11 SH3TC2 (ENSBGRG00000018333) #12 ABLIM3 (ENSBGRG00000018552) #13 AFAP1L1 (ENSBGRG00000018883) #15 GRPEL2 (ENSBGRG00000018960) PCYOX1L (ENSBGRG00000019037) #16 IL17B (ENSBGRG00000019180) #17 ENSBGRG00000019297 #19 ARHGEF37 (ENSBGRG00000019623) #20 PPARGC1B (ENSBGRG00000019954) #22 PDE6A (ENSBGRG00000020131) #23 SLC26A2 (ENSBGRG00000020568) #25 HMGXB3 (ENSBGRG00000020613) #26 CSF1R (ENSBGRG00000020676) #27 PDGFRB (ENSBGRG00000020782) #28 CDX1 (ENSBGRG00000021205) #30 SLC6A7 (ENSBGRG00000021265) #31 CAMK2A (ENSBGRG00000021420) #32 ARSI (ENSBGRG00000021902) #33 TCOF1 (ENSBGRG00000022016) #34 CD74 (ENSBGRG00000022423) #35 ENSBGRG00000022490 #36 NDST1 (ENSBGRG00000022569) SYNPO (ENSBGRG00000022770) MYOZ3 (ENSBGRG00000022822) Wild yak MODERN SPECIES 716 ABLIM3 (ENSBMUG00000014582) #13 AFAP1L1 (ENSBMUG00000014791) #15 GRPEL2 (ENSBMUG00000014818) PCYOX1L (ENSBMUG00000014872) #16 IL17B (ENSBMUG00000014891) #17 ENSBMUG00000014922 #19 ENSBMUG00000014942 #19 ARHGEF37 (ENSBMUG00000014980) #20 PPARGC1B (ENSBMUG00000015009) #22 PDE6A (ENSBMUG00000015080) #23 ENSBMUG00000015150 SLC26A2 (ENSBMUG00000015170) #25 HMGXB3 (ENSBMUG00000015189) #26 CSF1R (ENSBMUG00000015223) #27 Bos_b ANCESTRAL SPECIES 2 ENSGT00940000165308.c.a ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b.i ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700.ub.a.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.wb.b #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b ENSGT00950000183027.a.a Cow MODERN SPECIES 26 SPINK7 (ENSBTAG00000044183) #7 SPINK9 (ENSBTAG00000052488) #8 FBXO38 (ENSBTAG00000020303) #9 HTR4 (ENSBTAG00000010837) #10 ADRB2 (ENSBTAG00000002144) #11 SH3TC2 (ENSBTAG00000017151) #12 ABLIM3 (ENSBTAG00000004896) #13 ENSBTAG00000048563 AFAP1L1 (ENSBTAG00000019948) #15 ENSBTAG00000052766 GRPEL2 (ENSBTAG00000019950) PCYOX1L (ENSBTAG00000019951) #16 IL17B (ENSBTAG00000010578) #17 CSNK1A1 (ENSBTAG00000005326) #19 ARHGEF37 (ENSBTAG00000015419) #20 PPARGC1B (ENSBTAG00000012943) #22 PDE6A (ENSBTAG00000012945) #23 SLC26A2 (ENSBTAG00000014615) #25 HMGXB3 (ENSBTAG00000012768) #26 CSF1R (ENSBTAG00000012771) #27 PDGFRB (ENSBTAG00000002804) #28 CDX1 (ENSBTAG00000012014) #30 SLC6A7 (ENSBTAG00000000910) #31 CAMK2A (ENSBTAG00000020087) #32 ARSI (ENSBTAG00000012834) #33 TCOF1 (ENSBTAG00000015224) #34 CD74 (ENSBTAG00000015228) #35 RPS14 (ENSBTAG00000008570) #36 NDST1 (ENSBTAG00000001692) SYNPO (ENSBTAG00000013744) MYOZ3 (ENSBTAG00000025136) Hybrid Bos Indicus MODERN SPECIES 26 SPINK7 (ENSBIXG00005018848) #7 SPINK9 (ENSBIXG00005018872) #8 FBXO38 (ENSBIXG00005018959) #9 HTR4 (ENSBIXG00005019071) #10 ADRB2 (ENSBIXG00005019131) #11 ENSBIXG00005003118 SH3TC2 (ENSBIXG00005019209) #12 ABLIM3 (ENSBIXG00005019407) #13 ENSBIXG00005019455 AFAP1L1 (ENSBIXG00005003178) #15 ENSBIXG00005019586 PCYOX1L (ENSBIXG00005003199) #16 IL17B (ENSBIXG00005003205) #17 ENSBIXG00005019760 #19 ARHGEF37 (ENSBIXG00005019892) #20 PPARGC1B (ENSBIXG00005007671) #22 PDE6A (ENSBIXG00005006399) #23 SLC26A2 (ENSBIXG00005003313) #25 HMGXB3 (ENSBIXG00005020173) #26 CSF1R (ENSBIXG00005003356) #27 PDGFRB (ENSBIXG00005003405) #28 CDX1 (ENSBIXG00005003420) #30 SLC6A7 (ENSBIXG00005020348) #31 CAMK2A (ENSBIXG00005020401) #32 ARSI (ENSBIXG00005020426) #33 TCOF1 (ENSBIXG00005003479) #34 CD74 (ENSBIXG00005020644) #35 ENSBIXG00005003493 #36 NDST1 (ENSBIXG00005020779) SYNPO (ENSBIXG00005020825) MYOZ3 (ENSBIXG00005020843) American bison MODERN SPECIES 3206 ENSBBBG00000025494 SPINK13 (ENSBBBG00000007867) SPINK7 (ENSBBBG00000025440) #7 SPINK9 (ENSBBBG00000025423) #8 FBXO38 (ENSBBBG00000007859) #9 HTR4 (ENSBBBG00000025179) #10 ADRB2 (ENSBBBG00000008077) #11 SH3TC2 (ENSBBBG00000025093) #12 ABLIM3 (ENSBBBG00000025023) #13 AFAP1L1 (ENSBBBG00000024685) #15 ENSBBBG00000024632 PCYOX1L (ENSBBBG00000024617) #16 IL17B (ENSBBBG00000024601) #17 ENSBBBG00000024576 #19 ARHGEF37 (ENSBBBG00000000273) #20 PPARGC1B (ENSBBBG00000024422) #22 PDE6A (ENSBBBG00000024328) #23 SLC26A2 (ENSBBBG00000008983) #25 HMGXB3 (ENSBBBG00000006289) #26 CSF1R (ENSBBBG00000006257) #27 PDGFRB (ENSBBBG00000006246) #28 CDX1 (ENSBBBG00000023991) #30 SLC6A7 (ENSBBBG00000008692) #31 CAMK2A (ENSBBBG00000023955) #32 ARSI (ENSBBBG00000023880) #33 TCOF1 (ENSBBBG00000008689) #34 CD74 (ENSBBBG00000006073) #35 ENSBBBG00000000348 #36 NDST1 (ENSBBBG00000000377) SYNPO (ENSBBBG00000000444) MYOZ3 (ENSBBBG00000000464) Caprinae ANCESTRAL SPECIES 3 ENSGT00940000165308.c.a ENSGT00400000023784 ENSGT00940000161876 #7 ENSGT00530000064312 #8 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700.ub.a #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703.h.wb.b #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Rambouillet Sheep MODERN SPECIES 21 ENSOARG00020023322 SPINK13 (ENSOARG00020023348) SPINK7 (ENSOARG00020023362) #7 ENSOARG00020023389 #8 FBXO38 (ENSOARG00020023455) #9 HTR4 (ENSOARG00020023572) #10 ADRB2 (ENSOARG00020023772) #11 SH3TC2 (ENSOARG00020023787) #12 ABLIM3 (ENSOARG00020023876) #13 AFAP1L1 (ENSOARG00020024308) #15 GRPEL2 (ENSOARG00020024427) PCYOX1L (ENSOARG00020009821) #16 IL17B (ENSOARG00020009839) #17 ENSOARG00020009902 #19 ARHGEF37 (ENSOARG00020010150) #20 PPARGC1B (ENSOARG00020010324) #22 PDE6A (ENSOARG00020010736) #23 SLC26A2 (ENSOARG00020011309) #25 HMGXB3 (ENSOARG00020011388) #26 CSF1R (ENSOARG00020011611) #27 PDGFRB (ENSOARG00020011812) #28 CDX1 (ENSOARG00020011893) #30 SLC6A7 (ENSOARG00020011935) #31 CAMK2A (ENSOARG00020012100) #32 ARSI (ENSOARG00020012667) #33 TCOF1 (ENSOARG00020012742) #34 ENSOARG00020013258 #35 ENSOARG00020013429 #36 NDST1 (ENSOARG00020013489) SYNPO (ENSOARG00020013674) MYOZ3 (ENSOARG00020013724) Goat MODERN SPECIES 26 ENSCHIG00000018387 ENSCHIG00000025526 SPINK7 (ENSCHIG00000013983) #7 SPINK9 (ENSCHIG00000013135) #8 ENSCHIG00000016093 FBXO38 (ENSCHIG00000026135) #9 HTR4 (ENSCHIG00000022715) #10 SH3TC2 (ENSCHIG00000015736) #12 ABLIM3 (ENSCHIG00000021812) #13 AFAP1L1 (ENSCHIG00000003854) #15 GRPEL2 (ENSCHIG00000026744) PCYOX1L (ENSCHIG00000022991) #16 IL17B (ENSCHIG00000026913) #17 ENSCHIG00000012892 #19 ARHGEF37 (ENSCHIG00000025128) #20 PPARGC1B (ENSCHIG00000004409) #22 PDE6A (ENSCHIG00000017922) #23 SLC26A2 (ENSCHIG00000012265) #25 TIGD6 (ENSCHIG00000026767) HMGXB3 (ENSCHIG00000011628) #26 CSF1R (ENSCHIG00000026731) #27 PDGFRB (ENSCHIG00000024821) #28 CDX1 (ENSCHIG00000022811) #30 SLC6A7 (ENSCHIG00000022198) #31 CAMK2A (ENSCHIG00000025051) #32 ARSI (ENSCHIG00000006882) #33 TCOF1 (ENSCHIG00000007887) #34 CD74 (ENSCHIG00000014130) #35 ENSCHIG00000012469 #36 NDST1 (ENSCHIG00000017289) SYNPO (ENSCHIG00000024003) Siberian musk deer MODERN SPECIES 64 ARHGEF37 (ENSMMSG00000001496) #20 PPARGC1B (ENSMMSG00000001527) #22 PDE6A (ENSMMSG00000001576) #23 ENSMMSG00000001654 SLC26A2 (ENSMMSG00000001663) #25 HMGXB3 (ENSMMSG00000001693) #26 ENSMMSG00000001734 CSF1R (ENSMMSG00000001755) #27 PDGFRB (ENSMMSG00000001819) #28 CDX1 (ENSMMSG00000001895) #30 SLC6A7 (ENSMMSG00000001903) #31 CAMK2A (ENSMMSG00000001943) #32 ARSI (ENSMMSG00000002014) #33 TCOF1 (ENSMMSG00000002050) #34 CD74 (ENSMMSG00000002175) #35 ENSMMSG00000002199 #36 NDST1 (ENSMMSG00000002217) Yarkand deer MODERN SPECIES 32 ENSCHYG00000002996 SPINK13 (ENSCHYG00000003006) SPINK7 (ENSCHYG00000003021) #7 SPINK9 (ENSCHYG00000003036) #8 FBXO38 (ENSCHYG00000003111) #9 HTR4 (ENSCHYG00000003272) #10 ADRB2 (ENSCHYG00000003348) #11 SH3TC2 (ENSCHYG00000003366) #12 ABLIM3 (ENSCHYG00000003490) #13 AFAP1L1 (ENSCHYG00000003583) #15 GRPEL2 (ENSCHYG00000003657) PCYOX1L (ENSCHYG00000003705) #16 IL17B (ENSCHYG00000003726) #17 ENSCHYG00000003774 #19 ARHGEF37 (ENSCHYG00000003829) #20 PPARGC1B (ENSCHYG00000003895) #22 PDE6A (ENSCHYG00000003974) #23 SLC26A2 (ENSCHYG00000004031) #25 HMGXB3 (ENSCHYG00000004053) #26 CSF1R (ENSCHYG00000004143) #27 PDGFRB (ENSCHYG00000004180) #28 CDX1 (ENSCHYG00000004360) #30 SLC6A7 (ENSCHYG00000004421) #31 CAMK2A (ENSCHYG00000004518) #32 ARSI (ENSCHYG00000004887) #33 TCOF1 (ENSCHYG00000004939) #34 CD74 (ENSCHYG00000005571) #35 ENSCHYG00000005598 RPS14 (ENSCHYG00000005605) #36 NDST1 (ENSCHYG00000005637) SYNPO (ENSCHYG00000005748) Atlantogenata ANCESTRAL SPECIES ENSGT00530000064225 ENSGT00740000116871 ENSGT00940000161876 #7 ENSGT01080000259604 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961 #35 ENSGT00390000000703 #36 ENSGT00940000157857 ENSGT00950000183054.a.a.b Afrotheria ANCESTRAL SPECIES 7 ENSGT00390000011484 ENSGT00510000048608 ENSGT00940000161876 #7 ENSGT01080000259604 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000159769.a.b ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961.e #35 ENSGT00390000000703 #36 ENSGT00940000157857 Afrotheria_a ANCESTRAL SPECIES 7 ENSGT00390000011484 ENSGT00510000048608 ENSGT00940000161876 #7 ENSGT01080000259604 ENSGT00390000013163 #9 ENSGT00940000155983.a.a #10 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000159769.a.b ENSGT00940000157656.a #33 ENSGT00730000111382 #34 ENSGT00390000008961.e #35 ENSGT00390000000703 #36 ENSGT00940000157857 Elephant MODERN SPECIES 2 C5orf46 (ENSLAFG00000031450) SPINK5 (ENSLAFG00000002815) SPINK7 (ENSLAFG00000022995) #7 ENSLAFG00000016388 FBXO38 (ENSLAFG00000014405) #9 HTR4 (ENSLAFG00000013339) #10 ADRB2 (ENSLAFG00000032235) #11 SH3TC2 (ENSLAFG00000006471) #12 ABLIM3 (ENSLAFG00000006481) #13 AFAP1L1 (ENSLAFG00000006486) #15 GRPEL2 (ENSLAFG00000006489) PCYOX1L (ENSLAFG00000006493) #16 IL17B (ENSLAFG00000021716) #17 CSNK1A1 (ENSLAFG00000002394) #19 ARHGEF37 (ENSLAFG00000013074) #20 PPARGC1B (ENSLAFG00000012339) #22 PDE6A (ENSLAFG00000022256) #23 SLC26A2 (ENSLAFG00000029084) #25 HMGXB3 (ENSLAFG00000016790) #26 CSF1R (ENSLAFG00000016799) #27 PDGFRB (ENSLAFG00000016816) #28 CDX1 (ENSLAFG00000025906) #30 SLC6A7 (ENSLAFG00000011811) #31 ENSLAFG00000023243 ARSI (ENSLAFG00000014293) #33 TCOF1 (ENSLAFG00000021485) #34 CD74 (ENSLAFG00000017699) #35 ENSLAFG00000031195 #36 NDST1 (ENSLAFG00000000568) SYNPO (ENSLAFG00000006635) MYOZ3 (ENSLAFG00000001650) Hyrax MODERN SPECIES 4097 PPARGC1B (ENSPCAG00000012171) #22 ENSPCAG00000012330 #23 Tenrec MODERN SPECIES 4835 PPARGC1B (ENSETEG00000009222) #22 PDE6A (ENSETEG00000009225) #23 Xenarthra ANCESTRAL SPECIES 651 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000175494 ENSGT00940000162069 #30 Armadillo MODERN SPECIES 1068 PPARGC1B (ENSDNOG00000005985) #22 PDE6A (ENSDNOG00000005998) #23 SLC26A2 (ENSDNOG00000032277) #25 HMGXB3 (ENSDNOG00000006128) #26 CSF1R (ENSDNOG00000006156) #27 PDGFRB (ENSDNOG00000045278) #28 ENSDNOG00000047173 CDX1 (ENSDNOG00000033702) #30 Sloth MODERN SPECIES 4472 ENSCHOG00000005517 #22 Marsupialia ANCESTRAL SPECIES 9 ENSGT00940000156071 ENSGT00950000182810.A.b ENSGT00940000158849 ENSGT00940000160067 ENSGT00940000160864 ENSGT00390000012163 ENSGT00510000046929.b ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153700.kc #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792.o ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b Marsupialia_b ANCESTRAL SPECIES 5 ENSGT00940000156071 ENSGT00950000182810.A.b ENSGT00940000158849 ENSGT00940000160067 ENSGT00940000160864 ENSGT00390000012163 ENSGT00510000046929.b ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153700.kc #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792.o ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b Diprotodontia ANCESTRAL SPECIES 6 ENSGT00940000156071 ENSGT00950000182810.A.b ENSGT00940000158849 ENSGT00940000160067 ENSGT00940000160864 ENSGT00390000012163 ENSGT00510000046929.b ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153700.kc #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792.o ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b Wallaby MODERN SPECIES 6109 ENSMEUG00000015297 #22 Diprotodontia_a ANCESTRAL SPECIES 7 ENSGT00940000156071 ENSGT00950000182810.A.b ENSGT00940000158849 ENSGT00940000160067 ENSGT00940000160864 ENSGT00390000012163 ENSGT00510000046929.b ENSGT00940000160880 ENSGT00940000157770 ENSGT01030000234518.A.a.b ENSGT00950000182864.a.b.b.a.b.a.b ENSGT00940000158185 ENSGT01030000234527.A.a.b.b.a ENSGT00940000153700.kc #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000163700 ENSGT00390000006983 #26 ENSGT00940000155506 #27 ENSGT00940000157138 #28 ENSGT00940000162069 #30 ENSGT00940000160823 #31 ENSGT00940000155150.b.b #32 ENSGT00940000157656.a #33 ENSGT00390000009443 ENSGT00390000006954 ENSGT00390000002792.o ENSGT00950000183027.a.a ENSGT00950000183054.a.a.b Common wonbat MODERN SPECIES 1087 KCTD16 (ENSVURG00010008934) PRELID2 (ENSVURG00010008901) GRXCR2 (ENSVURG00010008892) SH3RF2 (ENSVURG00010008874) LARS1 (ENSVURG00010008801) RBM27 (ENSVURG00010008743) POU4F3 (ENSVURG00010008715) GPR151 (ENSVURG00010008710) TCERG1 (ENSVURG00010008636) PPP2R2B (ENSVURG00010008487) STK32A (ENSVURG00010008433) DPYSL3 (ENSVURG00010008394) ENSVURG00010008320 #19 ENSVURG00010008310 ARHGEF37 (ENSVURG00010008297) #20 PPARGC1B (ENSVURG00010008276) #22 SLC26A2 (ENSVURG00010008248) #25 TIGD6 (ENSVURG00010008246) HMGXB3 (ENSVURG00010008212) #26 CSF1R (ENSVURG00010008187) #27 PDGFRB (ENSVURG00010008163) #28 CDX1 (ENSVURG00010008143) #30 SLC6A7 (ENSVURG00010008134) #31 CAMK2A (ENSVURG00010008075) #32 ENSVURG00010008058 #33 ENSVURG00010008054 #33 SMIM3 (ENSVURG00010008052) DCTN4 (ENSVURG00010008039) ENSVURG00010008018 MYOZ3 (ENSVURG00010007998) ENSVURG00010007995 koala MODERN SPECIES 151 GRXCR2 (ENSPCIG00000005928) SH3RF2 (ENSPCIG00000030574) PLAC8L1 (ENSPCIG00000030573) LARS1 (ENSPCIG00000030572) RBM27 (ENSPCIG00000025797) POU4F3 (ENSPCIG00000025792) TCERG1 (ENSPCIG00000010713) GPR151 (ENSPCIG00000010706) PPP2R2B (ENSPCIG00000010698) STK32A (ENSPCIG00000020118) ENSPCIG00000020120 ENSPCIG00000020113 ENSPCIG00000020109 #19 ENSPCIG00000020106 ARHGEF37 (ENSPCIG00000020104) #20 PPARGC1B (ENSPCIG00000020102) #22 PDE6A (ENSPCIG00000019146) #23 SLC26A2 (ENSPCIG00000016473) #25 TIGD6 (ENSPCIG00000016474) HMGXB3 (ENSPCIG00000013139) #26 ENSPCIG00000031345 CSF1R (ENSPCIG00000019799) #27 PDGFRB (ENSPCIG00000019781) #28 CDX1 (ENSPCIG00000028021) #30 SLC6A7 (ENSPCIG00000028016) #31 CAMK2A (ENSPCIG00000028012) #32 ARSI (ENSPCIG00000015081) #33 SMIM3 (ENSPCIG00000015082) DCTN4 (ENSPCIG00000015084) RBM22 (ENSPCIG00000015088) MYOZ3 (ENSPCIG00000015092) Tasmanian devil MODERN SPECIES 1 YIPF5 (ENSSHAG00000004034) KCTD16 (ENSSHAG00000005464) PRELID2 (ENSSHAG00000024365) GRXCR2 (ENSSHAG00000008086) SH3RF2 (ENSSHAG00000002066) LARS1 (ENSSHAG00000006084) RBM27 (ENSSHAG00000006988) POU4F3 (ENSSHAG00000008089) TCERG1 (ENSSHAG00000009179) GPR151 (ENSSHAG00000026077) STK32A (ENSSHAG00000013781) ENSSHAG00000024017 ENSSHAG00000014038 ENSSHAG00000020812 #19 ENSSHAG00000015563 #20 ENSSHAG00000016400 #22 PDE6A (ENSSHAG00000016532) #23 SLC26A2 (ENSSHAG00000016766) #25 TIGD6 (ENSSHAG00000026142) HMGXB3 (ENSSHAG00000016817) #26 CSF1R (ENSSHAG00000016935) #27 PDGFRB (ENSSHAG00000017061) #28 CDX1 (ENSSHAG00000022841) #30 SLC6A7 (ENSSHAG00000017303) #31 CAMK2A (ENSSHAG00000017375) #32 ENSSHAG00000017512 #33 ENSSHAG00000023178 ENSSHAG00000022372 DCTN4 (ENSSHAG00000017664) ENSSHAG00000017734 ENSSHAG00000024493 Opossum MODERN SPECIES PRELID2 (ENSMODG00000010256) GRXCR2 (ENSMODG00000023740) SH3RF2 (ENSMODG00000010250) PLAC8L1 (ENSMODG00000010239) LARS1 (ENSMODG00000010231) RBM27 (ENSMODG00000010182) POU4F3 (ENSMODG00000010137) TCERG1 (ENSMODG00000010124) GPR151 (ENSMODG00000010101) PPP2R2B (ENSMODG00000010096) STK32A (ENSMODG00000010041) ENSMODG00000010051 ENSMODG00000009999 ENSMODG00000009937 #19 ARHGEF37 (ENSMODG00000009895) #20 PPARGC1B (ENSMODG00000009891) #22 PDE6A (ENSMODG00000009879) #23 SLC26A2 (ENSMODG00000045345) #25 HMGXB3 (ENSMODG00000009798) #26 CSF1R (ENSMODG00000009759) #27 PDGFRB (ENSMODG00000009737) #28 CDX1 (ENSMODG00000009708) #30 SLC6A7 (ENSMODG00000009703) #31 ENSMODG00000009615 #33 SMIM3 (ENSMODG00000023732) DCTN4 (ENSMODG00000038898) ENSMODG00000009574 MYOZ3 (ENSMODG00000009554) ENSMODG00000009545 CD74 (ENSMODG00000028756) #35 RPS14 (ENSMODG00000009485) #36 Platypus MODERN SPECIES 84 TFAP2D (ENSOANG00000003129) TFAP2B (ENSOANG00000003130) PKHD1 (ENSOANG00000003131) MCM3 (ENSOANG00000039131) ENSOANG00000003133 PAQR8 (ENSOANG00000003985) EFHC1 (ENSOANG00000003986) TRAM2 (ENSOANG00000020088) ENSOANG00000003988 ENSOANG00000042936 GRPEL2 (ENSOANG00000011040) PCYOX1L (ENSOANG00000013478) #16 ENSOANG00000013479 #17 CSNK1A1 (ENSOANG00000002863) #19 ARHGEF37 (ENSOANG00000039639) #20 PPARGC1B (ENSOANG00000009368) #22 PDE6A (ENSOANG00000009367) #23 SLC26A2 (ENSOANG00000037790) #25 HTR4 (ENSOANG00000009365) #10 FBXO38 (ENSOANG00000009363) #9 ENSOANG00000021422 ENSOANG00000037332 PPP2R2B (ENSOANG00000021421) GPR151 (ENSOANG00000006850) TCERG1 (ENSOANG00000006849) YWHAQ (ENSOANG00000007786) ENSOANG00000007787 GRHL1 (ENSOANG00000007788) KLF11 (ENSOANG00000007790) MRPS16 (ENSOANG00000042831) FBXW11 (ENSOANG00000007791) Sauria ANCESTRAL SPECIES 17 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00950000185681 ENSGT00940000159349 ENSGT00940000179707 ENSGT00940000159591 ENSGT00390000002292.b ENSGT00390000009693 ENSGT00940000159531 Lepidosauria ANCESTRAL SPECIES 15 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT01090000260260.a ENSGT00390000012630.A Episquamata ANCESTRAL SPECIES 4 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00940000157609 ENSGT01090000260260.a ENSGT00390000012630.A ENSGT00940000158048 ENSGT00950000183039.B.b.b ENSGT00940000156835 ENSGT00940000161316 ENSGT00530000063787.A ENSGT00940000154903 ENSGT00510000047951 ENSGT00940000159322 ENSGT00950000183061.a.a.a.a.a.a.a Laterata ANCESTRAL SPECIES 1 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00940000157609 ENSGT01090000260260.a ENSGT00390000012630.A ENSGT00940000158048 ENSGT00950000183039.B.b.b ENSGT00940000156835 ENSGT00940000161316 ENSGT00530000063787.A ENSGT00940000154903 ENSGT00510000047951 ENSGT00940000159322 ENSGT00950000183061.a.a.a.a.a.a.a Common wall lizard MODERN SPECIES 10 NEURL1B (ENSPMRG00000015130) SH3PXD2B (ENSPMRG00000015116) EFCAB9 (ENSPMRG00000015112) STK10 (ENSPMRG00000015086) ADRB2 (ENSPMRG00000015071) #11 SH3TC2 (ENSPMRG00000015037) #12 ABLIM3 (ENSPMRG00000014945) #13 AFAP1L1 (ENSPMRG00000014884) #15 ENSPMRG00000014867 GRPEL2 (ENSPMRG00000014847) PCYOX1L (ENSPMRG00000014840) #16 IL17B (ENSPMRG00000014838) #17 ENSPMRG00000014832 CSNK1A1 (ENSPMRG00000014794) #19 ARHGEF37 (ENSPMRG00000014779) #20 PPARGC1B (ENSPMRG00000014770) #22 SLC26A2 (ENSPMRG00000014766) #25 ENSPMRG00000014761 #25 HTR4 (ENSPMRG00000014752) #10 FBXO38 (ENSPMRG00000014703) #9 ECHS1 (ENSPMRG00000014691) ENSPMRG00000014686 ENSPMRG00000014682 ENSPMRG00000014677 ENSPMRG00000014672 KCNIP1 (ENSPMRG00000014664) KCNMB1 (ENSPMRG00000014652) ENSPMRG00000014648 ENSPMRG00000014643 FOXI1 (ENSPMRG00000014639) INSYN2B (ENSPMRG00000014634) Argentine black and white tegu MODERN SPECIES 1 SH3PXD2B (ENSSMRG00000000416) STK10 (ENSSMRG00000000484) EFCAB9 (ENSSMRG00000000510) UBTD2 (ENSSMRG00000000513) ENSSMRG00000000551 ADRB2 (ENSSMRG00000000556) #11 SH3TC2 (ENSSMRG00000000562) #12 ABLIM3 (ENSSMRG00000000668) #13 AFAP1L1 (ENSSMRG00000000709) #15 GRPEL2 (ENSSMRG00000000756) PCYOX1L (ENSSMRG00000000762) #16 IL17B (ENSSMRG00000000774) #17 CSNK1A1 (ENSSMRG00000000796) #19 ENSSMRG00000000841 ARHGEF37 (ENSSMRG00000000923) #20 PPARGC1B (ENSSMRG00000001032) #22 SLC26A2 (ENSSMRG00000001051) #25 ENSSMRG00000001136 #25 HTR4 (ENSSMRG00000001233) #10 FBXO38 (ENSSMRG00000001259) #9 ECHS1 (ENSSMRG00000001277) ENSSMRG00000001283 ENSSMRG00000001289 ENSSMRG00000001292 ENSSMRG00000001323 ENSSMRG00000001328 KCNIP1 (ENSSMRG00000001464) KCNMB1 (ENSSMRG00000001503) FOXI1 (ENSSMRG00000001519) DOCK2 (ENSSMRG00000001535) INSYN2B (ENSSMRG00000003214) Toxicofera ANCESTRAL SPECIES 3 ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00940000157609 ENSGT01040000241711 ENSGT00390000012630.A ENSGT00940000158048 ENSGT00950000183039.B.b.b ENSGT00940000156835 ENSGT00940000161316 ENSGT00530000063787.A ENSGT00940000154903 ENSGT00510000047951 ENSGT00940000159322 ENSGT00950000183061.a.a.a.a.a.a.a Elapidae ANCESTRAL SPECIES 2 ENSGT00940000158396 ENSGT00940000156818.p ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00940000157609 ENSGT01030000235731 ENSGT01010000230216 ENSGT01040000241711 ENSGT01010000229209 ENSGT01010000228740 ENSGT00390000012630.A ENSGT00940000158048 ENSGT00950000183039.B.b.b ENSGT00940000156835 ENSGT00940000161316 ENSGT00940000154903 Elapidae_a ANCESTRAL SPECIES 11 ENSGT00940000158396 ENSGT00940000156818.p ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00940000157609 ENSGT01030000235731 ENSGT01010000230216 ENSGT01040000241711 ENSGT01010000229209 ENSGT01010000228740 ENSGT00390000012630.A ENSGT00940000158048 ENSGT00950000183039.B.b.b ENSGT00940000156835 ENSGT00940000161316 ENSGT00530000063787.A Acanthophiinae ANCESTRAL SPECIES 12 ENSGT00940000158396 ENSGT00940000156818.p ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00900000143729 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00940000157609 ENSGT01030000235731 ENSGT01010000230216 ENSGT01040000241711 ENSGT01010000229209 ENSGT01010000228740 ENSGT00390000012630.A ENSGT00940000158048 ENSGT00950000183039.B.b.b ENSGT00940000156835 ENSGT00940000161316 ENSGT00530000063787.A Eastern brown snake MODERN SPECIES 6 NEURL1B (ENSPTXG00000001020) SH3PXD2B (ENSPTXG00000001015) STK10 (ENSPTXG00000000694) EFCAB9 (ENSPTXG00000000630) UBTD2 (ENSPTXG00000000628) ADRB2 (ENSPTXG00000000624) #11 SH3TC2 (ENSPTXG00000000607) #12 ABLIM3 (ENSPTXG00000000575) #13 AFAP1L1 (ENSPTXG00000000554) #15 GRPEL2 (ENSPTXG00000000539) PCYOX1L (ENSPTXG00000000528) #16 IL17B (ENSPTXG00000000473) #17 CSNK1A1 (ENSPTXG00000000431) #19 ENSPTXG00000000279 ARHGEF37 (ENSPTXG00000000222) #20 PPARGC1B (ENSPTXG00000000068) #22 SLC26A2 (ENSPTXG00000000054) #25 ENSPTXG00000009392 #25 HTR4 (ENSPTXG00000009391) #10 FBXO38 (ENSPTXG00000009390) #9 ECHS1 (ENSPTXG00000009389) ENSPTXG00000009388 ENSPTXG00000009387 ENSPTXG00000009386 ENSPTXG00000009385 KCNIP1 (ENSPTXG00000009384) KCNMB1 (ENSPTXG00000009383) ENSPTXG00000009382 ENSPTXG00000009381 FOXI1 (ENSPTXG00000009380) INSYN2B (ENSPTXG00000009379) Mainland tiger snake MODERN SPECIES 4 SH3PXD2B (ENSNSUG00000010565) STK10 (ENSNSUG00000010569) EFCAB9 (ENSNSUG00000010573) UBTD2 (ENSNSUG00000010577) ADRB2 (ENSNSUG00000010579) #11 SH3TC2 (ENSNSUG00000010581) #12 ABLIM3 (ENSNSUG00000010584) #13 AFAP1L1 (ENSNSUG00000010596) #15 GRPEL2 (ENSNSUG00000010706) PCYOX1L (ENSNSUG00000010707) #16 IL17B (ENSNSUG00000010709) #17 ENSNSUG00000010716 CSNK1A1 (ENSNSUG00000010717) #19 ENSNSUG00000010718 ARHGEF37 (ENSNSUG00000010758) #20 PPARGC1B (ENSNSUG00000010762) #22 SLC26A2 (ENSNSUG00000010802) #25 ENSNSUG00000010831 #25 HTR4 (ENSNSUG00000010865) #10 FBXO38 (ENSNSUG00000010869) #9 ECHS1 (ENSNSUG00000010986) ENSNSUG00000010989 ENSNSUG00000010995 ENSNSUG00000010996 ENSNSUG00000011001 ENSNSUG00000011003 KCNIP1 (ENSNSUG00000011005) KCNMB1 (ENSNSUG00000011009) ENSNSUG00000011014 FOXI1 (ENSNSUG00000011016) DOCK2 (ENSNSUG00000011021) Blue-lipped sea krait MODERN SPECIES 8023 PPARGC1B (ENSLLTG00000012291) #22 Indian cobra MODERN SPECIES 1 DUSP1 (ENSNNAG00000000362) NEURL1B (ENSNNAG00000000391) SH3PXD2B (ENSNNAG00000000415) STK10 (ENSNNAG00000000463) EFCAB9 (ENSNNAG00000000494) UBTD2 (ENSNNAG00000000511) ADRB2 (ENSNNAG00000000525) #11 SH3TC2 (ENSNNAG00000000550) #12 ABLIM3 (ENSNNAG00000000585) #13 AFAP1L1 (ENSNNAG00000000702) #15 GRPEL2 (ENSNNAG00000001028) PCYOX1L (ENSNNAG00000001092) #16 IL17B (ENSNNAG00000001196) #17 CSNK1A1 (ENSNNAG00000001230) #19 ARHGEF37 (ENSNNAG00000001335) #20 PPARGC1B (ENSNNAG00000001536) #22 SLC26A2 (ENSNNAG00000001567) #25 ENSNNAG00000001656 #25 HTR4 (ENSNNAG00000001749) #10 FBXO38 (ENSNNAG00000001781) #9 ECHS1 (ENSNNAG00000001819) ENSNNAG00000001839 ENSNNAG00000001865 ENSNNAG00000001880 ENSNNAG00000001889 ENSNNAG00000001898 ENSNNAG00000001909 ENSNNAG00000001918 ENSNNAG00000001929 ENSNNAG00000001941 ENSNNAG00000001950 Lizard MODERN SPECIES 1 UBTD2 (ENSACAG00000015415) ENSACAG00000038795 ADRB2 (ENSACAG00000015418) #11 SH3TC2 (ENSACAG00000015429) #12 ENSACAG00000039080 ABLIM3 (ENSACAG00000015469) #13 AFAP1L1 (ENSACAG00000015542) #15 GRPEL2 (ENSACAG00000015596) PCYOX1L (ENSACAG00000015622) #16 IL17B (ENSACAG00000015644) #17 CSNK1A1 (ENSACAG00000015659) #19 ENSACAG00000036989 ENSACAG00000028117 ARHGEF37 (ENSACAG00000015707) #20 ENSACAG00000028909 PPARGC1B (ENSACAG00000015737) #22 SLC26A2 (ENSACAG00000015760) #25 ENSACAG00000035366 #25 ENSACAG00000015764 #10 ENSACAG00000015809 #9 ENSACAG00000025449 ENSACAG00000029294 ENSACAG00000015834 ENSACAG00000015835 ENSACAG00000039938 ENSACAG00000024493 ENSACAG00000015836 KCNIP1 (ENSACAG00000015841) ENSACAG00000043166 KCNMB1 (ENSACAG00000029490) ENSACAG00000038101 tuatara MODERN SPECIES 1921 CSNK1A1 (ENSSPUG00000019269) #19 ARHGEF37 (ENSSPUG00000019270) #20 PPARGC1B (ENSSPUG00000019271) #22 ENSSPUG00000019272 HTR4 (ENSSPUG00000019274) #10 FBXO38 (ENSSPUG00000019275) #9 ENSSPUG00000019276 ENSSPUG00000019277 IL12B (ENSSPUG00000019278) Archelosauria ANCESTRAL SPECIES 15 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00950000185681 ENSGT00940000159349 ENSGT00940000179707 ENSGT00940000159591 ENSGT00390000002292.b Archosauria ANCESTRAL SPECIES 17 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00950000185681 ENSGT00940000159349 ENSGT00940000179707 ENSGT00940000159591 ENSGT00390000002292.b Aves ANCESTRAL SPECIES 15 ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00950000185681 ENSGT00940000159349 ENSGT00940000179707 ENSGT00940000159591 ENSGT00390000002292.b Neognathae ANCESTRAL SPECIES 14 ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00950000185681 ENSGT00940000159349 ENSGT00940000159591 ENSGT00390000002292.b ENSGT00390000009693 Neognathae_b ANCESTRAL SPECIES 16 ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00950000185681 ENSGT00940000159349 ENSGT00940000159591 ENSGT00390000002292.b ENSGT00390000009693 Neognathae_c ANCESTRAL SPECIES 19 ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00950000185681 ENSGT00940000159349 ENSGT00940000159591 ENSGT00390000002292.b ENSGT00390000009693 Kakapo MODERN SPECIES 6 DUSP1 (ENSSHBG00005016192) NEURL1B (ENSSHBG00005016201) SH3PXD2B (ENSSHBG00005016219) STK10 (ENSSHBG00005016343) UBTD2 (ENSSHBG00005017971) ADRB2 (ENSSHBG00005017975) #11 SH3TC2 (ENSSHBG00005017984) #12 ABLIM3 (ENSSHBG00005018000) #13 AFAP1L1 (ENSSHBG00005018003) #15 GRPEL2 (ENSSHBG00005018006) PCYOX1L (ENSSHBG00005018008) #16 IL17B (ENSSHBG00005018010) #17 CSNK1A1 (ENSSHBG00005018017) #19 ENSSHBG00005018025 ARHGEF37 (ENSSHBG00005018029) #20 PPARGC1B (ENSSHBG00005018033) #22 ENSSHBG00005018047 ENSSHBG00005018051 SLC26A2 (ENSSHBG00005018055) #25 ENSSHBG00005018064 #25 HTR4 (ENSSHBG00005018183) #10 FBXO38 (ENSSHBG00005018193) #9 ENSSHBG00005018201 IL12B (ENSSHBG00005018203) ADRA1B (ENSSHBG00005018208) TTC1 (ENSSHBG00005018210) PWWP2A (ENSSHBG00005018212) FABP6 (ENSSHBG00005018215) ENSSHBG00005018216 CCNJL (ENSSHBG00005018219) C1QTNF2 (ENSSHBG00005018222) Golden eagle MODERN SPECIES 14 ENSACCG00020012686 DUSP1 (ENSACCG00020012672) NEURL1B (ENSACCG00020012648) SH3PXD2B (ENSACCG00020012626) STK10 (ENSACCG00020012579) UBTD2 (ENSACCG00020012552) ADRB2 (ENSACCG00020012531) #11 SH3TC2 (ENSACCG00020012431) #12 ABLIM3 (ENSACCG00020012238) #13 AFAP1L1 (ENSACCG00020012061) #15 GRPEL2 (ENSACCG00020011972) PCYOX1L (ENSACCG00020011932) #16 IL17B (ENSACCG00020011884) #17 CSNK1A1 (ENSACCG00020011837) #19 ARHGEF37 (ENSACCG00020011768) #20 PPARGC1B (ENSACCG00020011712) #22 ENSACCG00020011667 ENSACCG00020011626 SLC26A2 (ENSACCG00020011604) #25 ENSACCG00020011572 #25 HTR4 (ENSACCG00020016661) #10 FBXO38 (ENSACCG00020016658) #9 ENSACCG00020016655 IL12B (ENSACCG00020016647) ADRA1B (ENSACCG00020016640) TTC1 (ENSACCG00020016637) PWWP2A (ENSACCG00020016631) FABP6 (ENSACCG00020016625) CCNJL (ENSACCG00020016616) C1QTNF2 (ENSACCG00020016613) SLU7 (ENSACCG00020016607) Passeriformes ANCESTRAL SPECIES 14 ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00940000159591 ENSGT00940000159784 ENSGT00390000004029 ENSGT00390000013467 ENSGT00950000182974.a.a.b Passeriformes_d ANCESTRAL SPECIES 15 ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00940000159591 ENSGT00940000159784 ENSGT00390000004029 ENSGT00390000013467 ENSGT00950000182974.a.a.b Passeriformes_g ANCESTRAL SPECIES 15 ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00940000159591 ENSGT00940000159784 ENSGT00390000004029 ENSGT00390000013467 ENSGT00950000182974.a.a.b Medium ground finch MODERN SPECIES 11 DUSP1 (ENSGFOG00000007032) NEURL1B (ENSGFOG00000007039) SH3PXD2B (ENSGFOG00000007045) STK10 (ENSGFOG00000007164) UBTD2 (ENSGFOG00000010545) ADRB2 (ENSGFOG00000010549) #11 ENSGFOG00000010556 #12 ABLIM3 (ENSGFOG00000010564) #13 AFAP1L1 (ENSGFOG00000010583) #15 GRPEL2 (ENSGFOG00000010597) PCYOX1L (ENSGFOG00000010603) #16 IL17B (ENSGFOG00000010605) #17 ENSGFOG00000010610 CSNK1A1 (ENSGFOG00000010614) #19 ARHGEF37 (ENSGFOG00000010621) #20 PPARGC1B (ENSGFOG00000010638) #22 ENSGFOG00000010644 ENSGFOG00000010647 SLC26A2 (ENSGFOG00000010656) #25 ENSGFOG00000010669 #25 HTR4 (ENSGFOG00000010835) #10 FBXO38 (ENSGFOG00000010861) #9 IL12B (ENSGFOG00000010875) ADRA1B (ENSGFOG00000010887) TTC1 (ENSGFOG00000010891) ENSGFOG00000010897 FABP6 (ENSGFOG00000010902) C1QTNF2 (ENSGFOG00000010908) GDF9 (ENSGFOG00000010909) UQCRQ (ENSGFOG00000010914) LEAP2 (ENSGFOG00000010917) Passeroidea ANCESTRAL SPECIES 15 ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00940000159591 ENSGT00940000159784 ENSGT00390000004029 ENSGT00390000013467 ENSGT00950000182974.a.a.b Zebra finch MODERN SPECIES 4 ERGIC1 (ENSTGUG00000000300) DUSP1 (ENSTGUG00000000299) NEURL1B (ENSTGUG00000000298) SH3PXD2B (ENSTGUG00000022640) STK10 (ENSTGUG00000000289) UBTD2 (ENSTGUG00000029278) ADRB2 (ENSTGUG00000000286) #11 SH3TC2 (ENSTGUG00000000277) #12 ABLIM3 (ENSTGUG00000000269) #13 AFAP1L1 (ENSTGUG00000000263) #15 GRPEL2 (ENSTGUG00000027926) PCYOX1L (ENSTGUG00000000252) #16 IL17B (ENSTGUG00000000251) #17 CSNK1A1 (ENSTGUG00000000243) #19 ARHGEF37 (ENSTGUG00000000241) #20 PPARGC1B (ENSTGUG00000000232) #22 ENSTGUG00000020371 SLC26A2 (ENSTGUG00000000228) #25 ENSTGUG00000000226 #25 HTR4 (ENSTGUG00000000218) #10 FBXO38 (ENSTGUG00000000212) #9 ENSTGUG00000027639 IL12B (ENSTGUG00000000209) ADRA1B (ENSTGUG00000000206) TTC1 (ENSTGUG00000000200) PWWP2A (ENSTGUG00000000199) FABP6 (ENSTGUG00000000197) C1QTNF2 (ENSTGUG00000000195) GDF9 (ENSTGUG00000000194) UQCRQ (ENSTGUG00000000193) LEAP2 (ENSTGUG00000000192) Common canary MODERN SPECIES 16 KIF20A (ENSSCAG00000000091) SFXN1 (ENSSCAG00000000132) NEURL1B (ENSSCAG00000000152) SH3PXD2B (ENSSCAG00000000168) STK10 (ENSSCAG00000000397) UBTD2 (ENSSCAG00000001079) ADRB2 (ENSSCAG00000001083) #11 SH3TC2 (ENSSCAG00000001099) #12 ABLIM3 (ENSSCAG00000001170) #13 AFAP1L1 (ENSSCAG00000001363) #15 GRPEL2 (ENSSCAG00000001377) PCYOX1L (ENSSCAG00000001381) #16 IL17B (ENSSCAG00000001387) #17 CSNK1A1 (ENSSCAG00000001399) #19 ARHGEF37 (ENSSCAG00000001410) #20 PPARGC1B (ENSSCAG00000001426) #22 ENSSCAG00000001456 SLC26A2 (ENSSCAG00000001463) #25 ENSSCAG00000001469 #25 HTR4 (ENSSCAG00000001475) #10 FBXO38 (ENSSCAG00000001522) #9 ENSSCAG00000001607 IL12B (ENSSCAG00000001611) ADRA1B (ENSSCAG00000001616) TTC1 (ENSSCAG00000001618) ENSSCAG00000001622 FABP6 (ENSSCAG00000001624) C1QTNF2 (ENSSCAG00000001626) GDF9 (ENSSCAG00000001629) UQCRQ (ENSSCAG00000001631) LEAP2 (ENSSCAG00000001633) Flycatcher MODERN SPECIES 4 SH3PXD2B (ENSFALG00000008827) ENSFALG00000008830 ENSFALG00000008833 ADRB2 (ENSFALG00000014433) #11 SH3TC2 (ENSFALG00000008835) #12 ABLIM3 (ENSFALG00000008837) #13 AFAP1L1 (ENSFALG00000008840) #15 GRPEL2 (ENSFALG00000008841) PCYOX1L (ENSFALG00000008842) #16 IL17B (ENSFALG00000025253) #17 ENSFALG00000025781 CSNK1A1 (ENSFALG00000028539) #19 ENSFALG00000025562 ENSFALG00000008853 ARHGEF37 (ENSFALG00000008850) #20 PPARGC1B (ENSFALG00000008858) #22 ENSFALG00000026287 ENSFALG00000028330 ENSFALG00000025241 SLC26A2 (ENSFALG00000022993) #25 ENSFALG00000026449 #10 ENSFALG00000008879 #9 ENSFALG00000027878 IL12B (ENSFALG00000008882) ADRA1B (ENSFALG00000008888) TTC1 (ENSFALG00000008895) ENSFALG00000028176 FABP6 (ENSFALG00000008903) C1QTNF2 (ENSFALG00000008905) GDF9 (ENSFALG00000022963) UQCRQ (ENSFALG00000008909) Great tit MODERN SPECIES 4 ERGIC1 (ENSPMJG00000006461) DUSP1 (ENSPMJG00000006458) NEURL1B (ENSPMJG00000006456) SH3PXD2B (ENSPMJG00000006447) STK10 (ENSPMJG00000006445) UBTD2 (ENSPMJG00000006444) ADRB2 (ENSPMJG00000006425) #11 SH3TC2 (ENSPMJG00000006424) #12 ABLIM3 (ENSPMJG00000006419) #13 AFAP1L1 (ENSPMJG00000006405) #15 GRPEL2 (ENSPMJG00000006401) PCYOX1L (ENSPMJG00000006393) #16 IL17B (ENSPMJG00000006386) #17 CSNK1A1 (ENSPMJG00000006380) #19 ARHGEF37 (ENSPMJG00000006361) #20 PPARGC1B (ENSPMJG00000006359) #22 ENSPMJG00000006357 ENSPMJG00000006353 ENSPMJG00000006348 SLC26A2 (ENSPMJG00000006346) #25 ENSPMJG00000006344 #25 HTR4 (ENSPMJG00000006340) #10 FBXO38 (ENSPMJG00000006329) #9 ENSPMJG00000006326 IL12B (ENSPMJG00000006319) ADRA1B (ENSPMJG00000006317) TTC1 (ENSPMJG00000006315) ENSPMJG00000006314 FABP6 (ENSPMJG00000006313) ENSPMJG00000006312 C1QTNF2 (ENSPMJG00000006311) Galloanserae ANCESTRAL SPECIES 14 ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00940000159349 ENSGT00940000159591 ENSGT00390000002292.b ENSGT00390000009693 ENSGT00940000159531 Anatidae ANCESTRAL SPECIES 52 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000237810 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00940000159349 ENSGT00940000159591 ENSGT00390000002292.b ENSGT00390000009693 Duck MODERN SPECIES 5 ABLIM3 (ENSAPLG00000012449) #13 AFAP1L1 (ENSAPLG00000011997) #15 ENSAPLG00000011936 PCYOX1L (ENSAPLG00000011797) #16 IL17B (ENSAPLG00000011795) #17 CSNK1A1 (ENSAPLG00000010571) #19 ARHGEF37 (ENSAPLG00000010419) #20 PPARGC1B (ENSAPLG00000009977) #22 SLC26A2 (ENSAPLG00000009889) #25 ENSAPLG00000027437 #25 HTR4 (ENSAPLG00000009505) #10 FBXO38 (ENSAPLG00000009306) #9 ENSAPLG00000018464 IL12B (ENSAPLG00000009092) ADRA1B (ENSAPLG00000009090) TTC1 (ENSAPLG00000008791) ENSAPLG00000027187 ENSAPLG00000020414 C1QTNF2 (ENSAPLG00000008595) SLU7 (ENSAPLG00000008133) ENSAPLG00000007970 ATP10B (ENSAPLG00000012027) ENSAPLG00000026525 Pink-footed goose MODERN SPECIES 415 ABLIM3 (ENSABRG00000011141) #13 AFAP1L1 (ENSABRG00000011185) #15 GRPEL2 (ENSABRG00000011218) PCYOX1L (ENSABRG00000011231) #16 IL17B (ENSABRG00000011243) #17 CSNK1A1 (ENSABRG00000011274) #19 ARHGEF37 (ENSABRG00000011303) #20 PPARGC1B (ENSABRG00000011312) #22 ENSABRG00000011319 Phasianidae ANCESTRAL SPECIES 14 ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b.h #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692.l ENSGT00940000157692.k ENSGT00940000157139 ENSGT00940000159349 ENSGT00940000159591 ENSGT00390000002292.b ENSGT00390000009693 Japanese quail MODERN SPECIES 4 ERGIC1 (ENSCJPG00005008827) DUSP1 (ENSCJPG00005008826) NEURL1B (ENSCJPG00005008825) SH3PXD2B (ENSCJPG00005008824) STK10 (ENSCJPG00005008823) UBTD2 (ENSCJPG00005008822) ADRB2 (ENSCJPG00005008819) #11 SH3TC2 (ENSCJPG00005008812) #12 ABLIM3 (ENSCJPG00005008809) #13 AFAP1L1 (ENSCJPG00005008808) #15 GRPEL2 (ENSCJPG00005008807) PCYOX1L (ENSCJPG00005008806) #16 IL17B (ENSCJPG00005008805) #17 CSNK1A1 (ENSCJPG00005008802) #19 ARHGEF37 (ENSCJPG00005008801) #20 PPARGC1B (ENSCJPG00005008794) #22 ENSCJPG00005008791 SLC26A2 (ENSCJPG00005008790) #25 ENSCJPG00005008787 #25 HTR4 (ENSCJPG00005008783) #10 FBXO38 (ENSCJPG00005008781) #9 ENSCJPG00005008780 ADRA1B (ENSCJPG00005008779) IL12B (ENSCJPG00005008776) TTC1 (ENSCJPG00005008775) PWWP2A (ENSCJPG00005008774) FABP6 (ENSCJPG00005008773) CCNJL (ENSCJPG00005008772) C1QTNF2 (ENSCJPG00005008771) SLU7 (ENSCJPG00005008769) ENSCJPG00005008768 Phasianidae_b ANCESTRAL SPECIES 18 ENSGT00530000063113.C ENSGT00940000159044 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b.h #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692.l ENSGT00940000157692.k ENSGT00940000157139 ENSGT00940000159349 ENSGT00940000159591 ENSGT00390000002292.b ENSGT00390000009693 Chicken MODERN SPECIES 4 ERGIC1 (ENSGALG00010009117) DUSP1 (ENSGALG00010008227) NEURL1B (ENSGALG00010012391) SH3PXD2B (ENSGALG00010012382) STK10 (ENSGALG00010012358) UBTD2 (ENSGALG00010012327) ADRB2 (ENSGALG00010012314) #11 SH3TC2 (ENSGALG00010012312) #12 ABLIM3 (ENSGALG00010012297) #13 AFAP1L1 (ENSGALG00010011745) #15 GRPEL2 (ENSGALG00010011784) PCYOX1L (ENSGALG00010011764) #16 IL17B (ENSGALG00010011754) #17 CSNK1A1 (ENSGALG00010011991) #19 ARHGEF37 (ENSGALG00010008217) #20 PPARGC1B (ENSGALG00010008209) #22 ENSGALG00010008195 ENSGALG00010008187 SLC26A2 (ENSGALG00010008174) #25 ENSGALG00010008173 #25 HTR4 (ENSGALG00010008169) #10 FBXO38 (ENSGALG00010011647) #9 ENSGALG00010009424 IL12B (ENSGALG00010009374) ADRA1B (ENSGALG00010009333) TTC1 (ENSGALG00010009303) ENSGALG00010009276 ENSGALG00010009268 FABP6 (ENSGALG00010009202) CCNJL (ENSGALG00010009151) C1QTNF2 (ENSGALG00010009097) African ostrich MODERN SPECIES 997 G3BP1 (ENSSCUG00000012837) ENSSCUG00000012836 SPARC (ENSSCUG00000012835) FAT2 (ENSSCUG00000012826) SLC36A1 (ENSSCUG00000012824) CCDC69 (ENSSCUG00000012820) ENSSCUG00000012818 ANXA6 (ENSSCUG00000012813) TNIP1 (ENSSCUG00000012804) ENSSCUG00000012801 DCTN4 (ENSSCUG00000012786) RBM22 (ENSSCUG00000012776) MYOZ3 (ENSSCUG00000012774) NDST1 (ENSSCUG00000012770) RPS14 (ENSSCUG00000012768) #36 PPARGC1B (ENSSCUG00000012755) #22 SLC26A2 (ENSSCUG00000012737) #25 ENSSCUG00000012735 #25 HTR4 (ENSSCUG00000012732) #10 FBXO38 (ENSSCUG00000012727) #9 ENSSCUG00000012726 IL12B (ENSSCUG00000012725) ADRA1B (ENSSCUG00000012720) TTC1 (ENSSCUG00000012719) ENSSCUG00000012715 FABP6 (ENSSCUG00000012711) CCNJL (ENSSCUG00000012708) ENSSCUG00000012706 C1QTNF2 (ENSSCUG00000012705) SLU7 (ENSSCUG00000012703) ENSSCUG00000012701 Australian saltwater crocodile MODERN SPECIES 34 NEURL1B (ENSCPRG00005007875) SH3PXD2B (ENSCPRG00005007836) STK10 (ENSCPRG00005007810) EFCAB9 (ENSCPRG00005007806) UBTD2 (ENSCPRG00005007804) ADRB2 (ENSCPRG00005007778) #11 SH3TC2 (ENSCPRG00005007768) #12 ABLIM3 (ENSCPRG00005007745) #13 AFAP1L1 (ENSCPRG00005007715) #15 GRPEL2 (ENSCPRG00005007705) PCYOX1L (ENSCPRG00005007700) #16 IL17B (ENSCPRG00005007697) #17 CSNK1A1 (ENSCPRG00005007410) #19 ENSCPRG00005007347 ARHGEF37 (ENSCPRG00005007253) #20 PPARGC1B (ENSCPRG00005007224) #22 ENSCPRG00005007214 ENSCPRG00005007213 SLC26A2 (ENSCPRG00005007205) #25 ENSCPRG00005007158 #25 HTR4 (ENSCPRG00005007148) #10 FBXO38 (ENSCPRG00005007108) #9 ENSCPRG00005007099 IL12B (ENSCPRG00005007094) ADRA1B (ENSCPRG00005007082) TTC1 (ENSCPRG00005007077) ENSCPRG00005007069 FABP6 (ENSCPRG00005007064) CCNJL (ENSCPRG00005007058) C1QTNF2 (ENSCPRG00005007055) SLU7 (ENSCPRG00005007052) Cryptodira ANCESTRAL SPECIES 15 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00940000159349 ENSGT00940000159591 ENSGT00390000002292.b ENSGT00390000009693 ENSGT00940000159531 Testudinoidea ANCESTRAL SPECIES 5 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT01000000218554 ENSGT00940000165772.b ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00940000159349 ENSGT00940000159591 ENSGT00390000002292.b Emydidae ANCESTRAL SPECIES 11 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT01000000218554 ENSGT00940000165772.b ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00940000159349 ENSGT00940000159591 ENSGT00390000002292.b Three-toed box turtle MODERN SPECIES 177 DUSP1 (ENSTMTG00000013458) NEURL1B (ENSTMTG00000013469) SH3PXD2B (ENSTMTG00000013489) STK10 (ENSTMTG00000013536) UBTD2 (ENSTMTG00000013558) ADRB2 (ENSTMTG00000013564) #11 SH3TC2 (ENSTMTG00000013579) #12 ABLIM3 (ENSTMTG00000013687) #13 AFAP1L1 (ENSTMTG00000014767) #15 GRPEL2 (ENSTMTG00000014920) PCYOX1L (ENSTMTG00000014925) #16 IL17B (ENSTMTG00000014942) #17 CSNK1A1 (ENSTMTG00000014973) #19 ENSTMTG00000014993 ARHGEF37 (ENSTMTG00000015020) #20 PPARGC1B (ENSTMTG00000015044) #22 ENSTMTG00000015086 SLC26A2 (ENSTMTG00000015109) #25 HTR4 (ENSTMTG00000015116) #10 FBXO38 (ENSTMTG00000015153) #9 ENSTMTG00000015184 ENSTMTG00000015196 ENSTMTG00000015207 IL12B (ENSTMTG00000015219) ADRA1B (ENSTMTG00000015241) TTC1 (ENSTMTG00000015247) PWWP2A (ENSTMTG00000015264) painted turtle MODERN SPECIES 2385 NEURL1B (ENSCPBG00000007630) SH3PXD2B (ENSCPBG00000007639) STK10 (ENSCPBG00000007660) EFCAB9 (ENSCPBG00000007673) UBTD2 (ENSCPBG00000007679) ADRB2 (ENSCPBG00000007688) #11 SH3TC2 (ENSCPBG00000007700) #12 ABLIM3 (ENSCPBG00000007739) #13 AFAP1L1 (ENSCPBG00000007799) #15 GRPEL2 (ENSCPBG00000007831) PCYOX1L (ENSCPBG00000007839) #16 IL17B (ENSCPBG00000007844) #17 CSNK1A1 (ENSCPBG00000007854) #19 ENSCPBG00000007862 ARHGEF37 (ENSCPBG00000007872) #20 PPARGC1B (ENSCPBG00000007891) #22 ENSCPBG00000007898 SLC26A2 (ENSCPBG00000007902) #25 ENSCPBG00000007906 HTR4 (ENSCPBG00000007919) #10 FBXO38 (ENSCPBG00000007955) #9 ENSCPBG00000007970 ENSCPBG00000007976 ENSCPBG00000007984 IL12B (ENSCPBG00000007991) ADRA1B (ENSCPBG00000008010) TTC1 (ENSCPBG00000008013) PWWP2A (ENSCPBG00000008022) FABP6 (ENSCPBG00000008028) CCNJL (ENSCPBG00000008032) C1QTNF2 (ENSCPBG00000008038) Testudinidae ANCESTRAL SPECIES 16 ENSGT00940000157079.a ENSGT00940000158396 ENSGT00940000156818 ENSGT00390000007501 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT01030000234583.a.b.b.f.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT01000000218554 ENSGT00940000165772.b ENSGT00960000189299 ENSGT00390000012630.A ENSGT00940000156944 ENSGT00940000157213 ENSGT00940000157692 ENSGT00940000157139 ENSGT00940000159349 ENSGT00940000159591 ENSGT00390000002292.b Abingdon island giant tortoise MODERN SPECIES 1807 SH3TC2 (ENSCABG00000012525) #12 ABLIM3 (ENSCABG00000012519) #13 AFAP1L1 (ENSCABG00000012310) #15 GRPEL2 (ENSCABG00000012309) PCYOX1L (ENSCABG00000012307) #16 IL17B (ENSCABG00000012306) #17 CSNK1A1 (ENSCABG00000012302) #19 ENSCABG00000012300 ENSCABG00000012299 PPARGC1B (ENSCABG00000012296) #22 ENSCABG00000012295 SLC26A2 (ENSCABG00000012294) #25 HTR4 (ENSCABG00000012290) #10 FBXO38 (ENSCABG00000012286) #9 ENSCABG00000012282 ENSCABG00000012280 IL12B (ENSCABG00000012277) ADRA1B (ENSCABG00000012272) TTC1 (ENSCABG00000012268) PWWP2A (ENSCABG00000012265) FABP6 (ENSCABG00000012261) CCNJL (ENSCABG00000012259) C1QTNF2 (ENSCABG00000012257) SLU7 (ENSCABG00000012026) ENSCABG00000012014 Goode s thornscrub tortoise MODERN SPECIES 22 ENSGEVG00005009428 STK10 (ENSGEVG00005009569) EFCAB9 (ENSGEVG00005009608) UBTD2 (ENSGEVG00005009650) ADRB2 (ENSGEVG00005009673) #11 SH3TC2 (ENSGEVG00005009752) #12 ENSGEVG00005009824 #13 ENSGEVG00005010177 #13 AFAP1L1 (ENSGEVG00005010272) #15 GRPEL2 (ENSGEVG00005010390) PCYOX1L (ENSGEVG00005010405) #16 IL17B (ENSGEVG00005010426) #17 CSNK1A1 (ENSGEVG00005010496) #19 ENSGEVG00005010620 ARHGEF37 (ENSGEVG00005010677) #20 PPARGC1B (ENSGEVG00005010716) #22 ENSGEVG00005010816 SLC26A2 (ENSGEVG00005010871) #25 HTR4 (ENSGEVG00005010911) #10 FBXO38 (ENSGEVG00005011028) #9 ENSGEVG00005011127 ENSGEVG00005011162 ENSGEVG00005011208 ENSGEVG00005011251 IL12B (ENSGEVG00005011293) ADRA1B (ENSGEVG00005011409) TTC1 (ENSGEVG00005011434) PWWP2A (ENSGEVG00005011464) FABP6 (ENSGEVG00005011498) CCNJL (ENSGEVG00005011585) C1QTNF2 (ENSGEVG00005011684) Chinese turtle MODERN SPECIES 2220 NEURL1B (ENSPSIG00000010315) SH3PXD2B (ENSPSIG00000010303) STK10 (ENSPSIG00000009241) EFCAB9 (ENSPSIG00000009216) UBTD2 (ENSPSIG00000009210) ADRB2 (ENSPSIG00000008710) #11 SH3TC2 (ENSPSIG00000007989) #12 ABLIM3 (ENSPSIG00000006198) #13 AFAP1L1 (ENSPSIG00000015614) #15 GRPEL2 (ENSPSIG00000015124) PCYOX1L (ENSPSIG00000013871) #16 IL17B (ENSPSIG00000013786) #17 CSNK1A1 (ENSPSIG00000012179) #19 ENSPSIG00000000250 ARHGEF37 (ENSPSIG00000011066) #20 PPARGC1B (ENSPSIG00000008358) #22 SLC26A2 (ENSPSIG00000007690) #25 HTR4 (ENSPSIG00000006016) #10 FBXO38 (ENSPSIG00000005569) #9 IL12B (ENSPSIG00000018025) ADRA1B (ENSPSIG00000017993) ARX (ENSPSIG00000017365) IL1RAPL1 (ENSPSIG00000016810) ENSPSIG00000016721 ENSPSIG00000000229 TASL (ENSPSIG00000000221) ENSPSIG00000014520 ENSPSIG00000000217 TAB3 (ENSPSIG00000012851) Anura ANCESTRAL SPECIES ENSGT00390000005154 ENSGT00940000158670 ENSGT00940000154966 ENSGT00390000004149 ENSGT00940000156818 ENSGT00940000156641 ENSGT00940000159538 #11 ENSGT00530000063812.B #12 ENSGT00950000182850.a.b.a.b.b #13 ENSGT00950000183067.a.b.a #15 ENSGT00390000005589.a.b ENSGT00390000011206.b #16 ENSGT00940000160854 #17 ENSGT00940000153700 #19 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00390000013163 #9 ENSGT01090000260260 ENSGT00940000158761 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00940000153451.a.a.b ENSGT00390000000537 ENSGT00530000064714 ENSGT00940000160017 ENSGT00390000003426 ENSGT00940000164577 ENSGT00940000161364 Frog MODERN SPECIES 3 msx2 (ENSXETG00000009168) ENSXETG00000041565 nsg2 (ENSXETG00000009166) cpeb4 (ENSXETG00000012731) stc2 (ENSXETG00000012730) nkx2-5 (ENSXETG00000012729) bnip1 (ENSXETG00000044127) crebrf (ENSXETG00000012727) ENSXETG00000042330 atp6v0e1 (ENSXETG00000024781) jakmip2 (ENSXETG00000012726) rpl26 (ENSXETG00000024782) dpysl3 (ENSXETG00000012718) stk32a (ENSXETG00000012715) arhgef37 (ENSXETG00000012714) #20 ppargc1b (ENSXETG00000012711) #22 pde6a (ENSXETG00000012709) #23 slc26a2 (ENSXETG00000049390) #25 slc26a2.2 (ENSXETG00000031991) #25 ENSXETG00000045931 ENSXETG00000047377 htr4 (ENSXETG00000019373) #10 fbxo38 (ENSXETG00000019371) #9 ENSXETG00000046062 ENSXETG00000045645 ENSXETG00000036085 ENSXETG00000048539 ENSXETG00000046050 XB5861580 [provisional] (ENSXETG00000019368) ENSXETG00000047996 ENSXETG00000046738 Leishan spiny toad MODERN SPECIES 6 ENSLLEG00000008087 ADRB2 (ENSLLEG00000008145) #11 ENSLLEG00000008163 ENSLLEG00000008172 SH3TC2 (ENSLLEG00000008218) #12 ENSLLEG00000008519 ENSLLEG00000008540 ABLIM3 (ENSLLEG00000008655) #13 AFAP1L1 (ENSLLEG00000009809) #15 GRPEL2 (ENSLLEG00000010154) PCYOX1L (ENSLLEG00000010203) #16 IL17B (ENSLLEG00000010266) #17 CSNK1A1 (ENSLLEG00000010398) #19 ENSLLEG00000010913 ARHGEF37 (ENSLLEG00000010958) #20 PPARGC1B (ENSLLEG00000011230) #22 PDE6A (ENSLLEG00000011396) #23 SLC26A2 (ENSLLEG00000011545) #25 ENSLLEG00000011579 #25 ENSLLEG00000011619 #25 ENSLLEG00000011675 HTR4 (ENSLLEG00000011727) #10 FBXO38 (ENSLLEG00000012045) #9 ENSLLEG00000012192 ENSLLEG00000012205 ENSLLEG00000012242 ENSLLEG00000012273 ENSLLEG00000012291 ENSLLEG00000012365 ENSLLEG00000012382 ENSLLEG00000012407 Coelacanth MODERN SPECIES 1182 ABLIM3 (ENSLACG00000001207) #13 AFAP1L1 (ENSLACG00000004868) #15 GRPEL2 (ENSLACG00000006320) PCYOX1L (ENSLACG00000006394) #16 IL17B (ENSLACG00000006880) #17 CSNK1A1 (ENSLACG00000008673) #19 ARHGEF37 (ENSLACG00000009628) #20 PPARGC1B (ENSLACG00000011232) #22 ENSLACG00000011710 PDE6A (ENSLACG00000012002) #23 SLC26A2 (ENSLACG00000012512) #25 ENSLACG00000012970 #25 Actinopterygii ANCESTRAL SPECIES 176 ENSGT00390000013163 #9 ENSGT00940000153700 #19 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00940000153147 ENSGT00940000154808.a.b ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000159322 ENSGT00940000171091 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000161330 #23 ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000154361.B ENSGT00940000157425.A ENSGT00940000158603 ENSGT00940000153203.A.a Neopterygii ANCESTRAL SPECIES 164 ENSGT00940000160487 ENSGT00940000160541 ENSGT00390000013163 #9 ENSGT00940000153700 #19 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00940000153147 ENSGT00940000154808.a.b ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000159322 ENSGT00940000171091 ENSGT00940000163999.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000159747 ENSGT00940000157712 ENSGT00940000157425.A ENSGT00940000158603 ENSGT00940000153203.A.a Osteoglossocephalai ANCESTRAL SPECIES 133 ENSGT00510000046732.B ENSGT00920000149123.d ENSGT00940000156736 ENSGT00740000115581.f ENSGT00390000013163 #9 ENSGT00940000153700 #19 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00940000153147 ENSGT00940000154808.a.b ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000159322 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000159747 ENSGT00940000157712 Clupeocephala ANCESTRAL SPECIES 28 ENSGT00940000156736.d ENSGT00390000013163 #9 ENSGT00940000153700 #19 ENSGT01030000234957 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00940000153147.a.a ENSGT00940000154808.a.b ENSGT00940000167175 ENSGT00940000165646.B ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000159322 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000159747 ENSGT00940000157712 ENSGT00980000203236 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b Euteleosteomorpha ANCESTRAL SPECIES 9 ENSGT00920000149123.d ENSGT00940000156736.d ENSGT00390000013163 #9 ENSGT00940000153700 #19 ENSGT01030000234957 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00940000154808.a.b ENSGT00940000167175 ENSGT00940000165646.B ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000159322 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000159747 ENSGT00940000157712 ENSGT00980000203236 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b Protacanthopterygii ANCESTRAL SPECIES 19 ENSGT00940000154808.a.b ENSGT00950000183123 ENSGT00390000004405.a.c ENSGT00940000157046.E ENSGT00940000158313.a.a ENSGT00940000158675.b ENSGT00940000160528.a ENSGT00940000158956.d ENSGT00940000153147.a.a ENSGT00940000165646.B ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000159322 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000157139.a ENSGT00950000182934.b ENSGT00940000156944.a.b ENSGT00940000163509.a.a.a ENSGT00940000163509.b ENSGT00940000165075.a.b ENSGT00940000160001 ENSGT00940000158095 ENSGT00940000165836 ENSGT00940000157061.b ENSGT00530000063371.C.b ENSGT00940000159222.k Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 320 ENSGT00920000149123.d.h.b ENSGT00940000156736.d.a ENSGT00390000013163.g #9 ENSGT00940000153700.e #19 ENSGT00940000153909.b.d ENSGT00510000047951.i ENSGT00950000183123.o.a.a.b ENSGT00940000153147.a.a ENSGT00940000165646.B ENSGT00940000157891.d ENSGT00950000183033.a.b.b.o ENSGT00390000000618.a ENSGT00980000199741.C ENSGT00940000159322.g.a ENSGT00950000183088.a.a.i #20 ENSGT00950000183137.b.b.a #22 ENSGT00940000156471.b.d ENSGT00940000155983.a.a.f.a.a #10 Salmoninae_a ANCESTRAL SPECIES 12 ENSGT00940000165542.a ENSGT00940000160541.e ENSGT00920000149123.d.h.b ENSGT00940000156736.d.a ENSGT00390000013163.g #9 ENSGT00940000153700.e #19 ENSGT00940000153909.b.d ENSGT00510000047951.i ENSGT00940000154808.a.b.m ENSGT00940000157891.d ENSGT00950000183033.a.b.b.o ENSGT00390000000618.a ENSGT00980000199741.C ENSGT00940000159322.g.a ENSGT00950000183088.a.a.i #20 ENSGT00950000183137.b.b.a #22 ENSGT00940000156471.b.d ENSGT00940000155983.a.a.f.a.a #10 ENSGT00990000211098 ENSGT00940000156944.a.b.b ENSGT00940000163509.a.a.a.r ENSGT00940000165075.a.b.b.a ENSGT00940000160001.g ENSGT00940000158095.k ENSGT00940000165836.c ENSGT00940000157061.b.k.a.b ENSGT00530000063371.C.b.b ENSGT00940000159222.k ENSGT00940000154735.d.a.a.b.b ENSGT00940000159595.p ENSGT00940000154461.ed Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00920000149123.d.h.b ENSGT00940000156736.d.a ENSGT00390000013163.g #9 ENSGT00940000153700.e #19 ENSGT01030000234957.d ENSGT00940000153909.b.d ENSGT00510000047951.i ENSGT00940000154808.a.b.m.a ENSGT01060000253572 ENSGT00940000157891.d ENSGT00950000183033.a.b.b.o ENSGT00390000000618.a ENSGT00980000199741.C ENSGT00940000159322.g.a ENSGT00950000183088.a.a.i #20 ENSGT00950000183137.b.b.a #22 ENSGT00940000156471.b.d ENSGT00940000155983.a.a.f.b #10 ENSGT00990000211098 ENSGT00940000156944.a.b.b ENSGT00940000163509.a.a.a.r ENSGT00940000165075.a.b.b.a ENSGT00940000160001.g ENSGT00940000158095.k ENSGT00940000165836.c ENSGT00940000157061.b.k.a.b ENSGT00530000063371.C.b.b ENSGT00940000159222.k.a ENSGT00940000154735.d.a.a.b.b ENSGT00940000159595.p ENSGT00940000154461.ed Rainbow trout MODERN SPECIES 5 ENSOMYG00000013966 #9 csnk1a1 (ENSOMYG00000014106) #19 ENSOMYG00000059381 ENSOMYG00000014186 spdl1 (ENSOMYG00000023860) ENSOMYG00000057051 roa0 (ENSOMYG00000014228) ENSOMYG00000068248 ENSOMYG00000014276 fam13b (ENSOMYG00000014467) cxcl14 (ENSOMYG00000015124) ENSOMYG00000050397 casp (ENSOMYG00000015137) slit3 (ENSOMYG00000015271) ENSOMYG00000015421 #20 ENSOMYG00000015444 #22 pde6a (ENSOMYG00000015465) ENSOMYG00000015537 #10 ENSOMYG00000015574 ENSOMYG00000015616 ENSOMYG00000049267 ENSOMYG00000015623 egr1 (ENSOMYG00000015637) REEP2 (ENSOMYG00000015666) ENSOMYG00000015748 ENSOMYG00000019773 ENSOMYG00000076089 FAM53C (ENSOMYG00000003319) ENSOMYG00000003859 hnrnpaba (ENSOMYG00000004211) ENSOMYG00000004237 Oncorhynchus_a ANCESTRAL SPECIES 20 ENSGT00940000156736.d.a ENSGT00390000013163.g #9 ENSGT00940000153700.e #19 ENSGT01030000234957.d ENSGT00940000153909.b.d ENSGT00510000047951.i.c ENSGT00510000047951.i.d ENSGT00940000154808.a.b.m.a ENSGT01060000253572 ENSGT00940000157891.d ENSGT00950000183033.a.b.b.o ENSGT00390000000618.a ENSGT00980000199741.C ENSGT00940000159322.g.a ENSGT00950000183088.a.a.i #20 ENSGT00950000183137.b.b.a #22 ENSGT00940000156471.b.d ENSGT01050000247992 ENSGT00940000155983.a.a.f.b #10 ENSGT00990000211098 ENSGT00940000156944.a.b.b ENSGT00940000163509.a.a.a.r ENSGT00940000165075.a.b.b.a ENSGT00940000160001.g ENSGT00940000158095.k ENSGT00940000165836.c ENSGT00940000157061.b.k.a.b ENSGT00530000063371.C.b.b ENSGT00940000159222.k.a ENSGT00940000154735.d.a.a.b.b ENSGT00940000159595.p Chinook salmon MODERN SPECIES 13 maea (ENSOTSG00005040200) nkx1.2lb (ENSOTSG00005040201) SLBP (ENSOTSG00005040205) ENSOTSG00005040210 ENSOTSG00005040211 STOX2 (ENSOTSG00005040216) spdl1 (ENSOTSG00005040217) ENSOTSG00005040219 ENSOTSG00005040220 KLHL3 (ENSOTSG00005040221) fam13b (ENSOTSG00005040245) cxcl14 (ENSOTSG00005040351) ENSOTSG00005040356 slit3 (ENSOTSG00005011190) ENSOTSG00005011321 #20 ENSOTSG00005011326 #22 ENSOTSG00005011329 ENSOTSG00005011330 HTR4 (ENSOTSG00005011331) #10 ENSOTSG00005011334 adra1bb (ENSOTSG00005011337) ENSOTSG00005011338 egr1 (ENSOTSG00005011340) ENSOTSG00005011357 ENSOTSG00005016044 ctbp1 (ENSOTSG00005016046) FAM53C (ENSOTSG00005016061) phykpl (ENSOTSG00005016069) hnrnpaba (ENSOTSG00005017532) ENSOTSG00005017533 nme5 (ENSOTSG00005017534) Coho salmon MODERN SPECIES 10 fgfrl1b (ENSOKIG00005011388) FBXO38 (ENSOKIG00005011418) #9 csnk1a1 (ENSOKIG00005011575) #19 SIL1 (ENSOKIG00005011680) spdl1 (ENSOKIG00005011705) ENSOKIG00005011834 ENSOKIG00005011978 ENSOKIG00005011979 KLHL3 (ENSOKIG00005012034) fam13b (ENSOKIG00005012721) cxcl14 (ENSOKIG00005012842) ENSOKIG00005012866 slit3 (ENSOKIG00005012886) ENSOKIG00005012944 ENSOKIG00005012948 #20 ENSOKIG00005012960 #22 pde6a (ENSOKIG00005012971) ENSOKIG00005013033 ENSOKIG00005013048 HTR4 (ENSOKIG00005013060) #10 ENSOKIG00005013074 ADRA1B (ENSOKIG00005013118) ENSOKIG00005013136 egr1 (ENSOKIG00005013181) reep2 (ENSOKIG00005013190) KDM3B (ENSOKIG00005013336) ENSOKIG00005017111 ctbp1 (ENSOKIG00005017127) FAM53C (ENSOKIG00005017357) phykpl (ENSOKIG00005017410) hnrnpaba (ENSOKIG00005017771) Salmo ANCESTRAL SPECIES 1 ENSGT00920000149123.d.h.b ENSGT00940000156736.d.a ENSGT00390000013163.g #9 ENSGT00940000153700.e #19 ENSGT00940000153909.b.d ENSGT00510000047951.i ENSGT00950000183123.o.a.a.b ENSGT00940000153147.a.a ENSGT00940000165646.B ENSGT00940000157891.d ENSGT00950000183033.a.b.b.o ENSGT00390000000618.a ENSGT00980000199741.C ENSGT00940000159322.g.a ENSGT00950000183088.a.a.i #20 ENSGT00950000183137.b.b.a #22 ENSGT00940000156471.b.d ENSGT01100000263544.c.a.a.a.d #25 ENSGT00940000155983.a.a.f.a.a #10 ENSGT00990000211098 ENSGT00940000156944.a.b.b ENSGT00940000163509.a.a.a.r ENSGT00940000165075.a.b.b.a ENSGT00940000160001.g ENSGT00940000158095.k ENSGT00940000165836.c ENSGT00940000157061.b.k.a.b ENSGT00530000063371.C.b.b ENSGT00940000159222.k ENSGT00940000159222.l ENSGT00940000154735.d.a.a.b.b Atlantic salmon MODERN SPECIES 24 ENSSSAG00000052912 ENSSSAG00000047960 ENSSSAG00000047900 fbxo38 (ENSSSAG00000047516) #9 csnk1a1 (ENSSSAG00000047433) #19 ENSSSAG00000047423 spdl1 (ENSSSAG00000047397) ENSSSAG00000093198 ENSSSAG00000085929 ENSSSAG00000046126 fam13b (ENSSSAG00000047130) cxcl14 (ENSSSAG00000047101) ENSSSAG00000047093 slit3 (ENSSSAG00000044758) ARHGEF37 (ENSSSAG00000044512) #20 ENSSSAG00000044482 #22 pde6a (ENSSSAG00000042795) ENSSSAG00000042753 #25 ENSSSAG00000042720 #10 ENSSSAG00000042670 ENSSSAG00000086827 ENSSSAG00000042639 ENSSSAG00000094693 egr1 (ENSSSAG00000093647) REEP2 (ENSSSAG00000102121) ENSSSAG00000038175 ENSSSAG00000037131 ENSSSAG00000086354 FAM53C (ENSSSAG00000058417) ENSSSAG00000083693 ENSSSAG00000091908 River trout MODERN SPECIES 22 ENSSTUG00000042612 hspa9 (ENSSTUG00000039509) fgfrl1b (ENSSTUG00000039436) FBXO38 (ENSSTUG00000039245) #9 csnk1a1 (ENSSTUG00000039095) #19 ENSSTUG00000039082 ENSSTUG00000039066 spdl1 (ENSSTUG00000039037) ENSSTUG00000039022 KLHL3 (ENSSTUG00000038835) fam13b (ENSSTUG00000038726) cxcl14 (ENSSTUG00000038706) ENSSTUG00000038696 slit3 (ENSSTUG00000033027) ENSSTUG00000032787 #20 ENSSTUG00000032766 #22 pde6a (ENSSTUG00000032347) HTR4 (ENSSTUG00000032302) #10 ENSSTUG00000032290 ENSSTUG00000032248 ADRA1B (ENSSTUG00000032241) ENSSTUG00000032230 egr1 (ENSSTUG00000032214) reep2 (ENSSTUG00000032156) KDM3B (ENSSTUG00000028442) ENSSTUG00000028302 ctbp1 (ENSSTUG00000015345) FAM53C (ENSSTUG00000015330) ENSSTUG00000015324 phykpl (ENSSTUG00000014904) hnrnpaba (ENSSTUG00000014841) Huchen MODERN SPECIES 476 fam13b (ENSHHUG00000030080) cxcl14 (ENSHHUG00000030073) ENSHHUG00000030056 slit3 (ENSHHUG00000029347) ENSHHUG00000029320 #20 ENSHHUG00000029315 #22 pde6a (ENSHHUG00000029262) ENSHHUG00000029259 #10 Salmoninae ANCESTRAL SPECIES 326 ENSGT00950000183088.a.a.j #20 ENSGT00950000183137.b.b.b #22 ENSGT00940000156471.b.c ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a.e #10 ENSGT00940000155983.a.a.f.a.b #10 ENSGT00940000157139.a ENSGT00940000156944.a.b.a ENSGT00940000165075.a.b.b.b ENSGT00940000160001.h ENSGT00940000158095.l ENSGT00940000165836.d ENSGT00940000157061.b.k.a.a ENSGT00530000063371.C.b.a ENSGT00940000154735.d.a.a.b.a ENSGT00940000159595.o ENSGT00940000154461.fd Salmoninae_a ANCESTRAL SPECIES 41 ENSGT00920000149123.d.h.a ENSGT00940000156736.d.b.a.a ENSGT00940000156736.d.b.b ENSGT00390000013163.h #9 ENSGT00940000153700.f #19 ENSGT01030000234957 ENSGT00940000153909.b.c ENSGT00510000047951.j ENSGT00940000154808.a.b.n ENSGT00950000183123.p ENSGT00940000157891.c ENSGT00950000183033.a.b.b.p ENSGT00390000000618.b ENSGT00940000159322.g.b ENSGT00950000183088.a.a.j #20 ENSGT00950000183137.b.b.b #22 ENSGT00940000156471.b.c ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a.e #10 ENSGT00940000157139.a ENSGT00990000212007 ENSGT00950000182934.b ENSGT00940000156944.a.b.a ENSGT00940000165075.a.b.b.b ENSGT00940000160001.h ENSGT00940000158095.l ENSGT00940000165836.d ENSGT00940000157061.b.k.a.a ENSGT00530000063371.C.b.a ENSGT00940000159222.l ENSGT00940000154735.d.a.a.b.a Oncorhynchus ANCESTRAL SPECIES 34 ENSGT00920000149123.d.h.a ENSGT00940000156736.d.b.a.a ENSGT00940000153700.f #19 ENSGT01030000234957.c ENSGT00940000153909.b.c ENSGT00510000047951.j ENSGT00940000154808.a.b.n ENSGT00940000165646.B ENSGT00940000154808.a.b.m.b ENSGT00950000183123.p ENSGT00940000157891.c ENSGT00950000183033.a.b.b.p ENSGT00390000000618.b ENSGT00940000159322.g.b ENSGT00950000183088.a.a.j #20 ENSGT00950000183137.b.b.b #22 ENSGT00940000156471.b.c ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a.e #10 ENSGT00940000157139.a ENSGT00990000212007 ENSGT00940000156944.a.b.a ENSGT00940000165075.a.b.b.b ENSGT00940000160001.h ENSGT00940000158095.l ENSGT00940000165836.d ENSGT00940000157061.b.k.a.a ENSGT00530000063371.C.b.a ENSGT00940000159222.k.b ENSGT00940000154735.d.a.a.b.a ENSGT00940000159595.o Oncorhynchus_a ANCESTRAL SPECIES 34 ENSGT00940000160541.f ENSGT00510000046732.B ENSGT00920000149123.d.h.a ENSGT00940000156736.d.b.a.a ENSGT00940000153700.f #19 ENSGT01030000234957.c ENSGT00940000153909.b.c ENSGT00510000047951.j ENSGT00940000154808.a.b.m.b ENSGT00950000183123.p ENSGT00940000157891.c ENSGT00950000183033.a.b.b.p ENSGT00390000000618.b ENSGT00940000159322.g.b ENSGT00950000183088.a.a.j #20 ENSGT00950000183137.b.b.b #22 ENSGT00940000156471.b.c ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a.e #10 ENSGT00940000157139.a ENSGT00990000212007 ENSGT00940000156944.a.b.a ENSGT00940000165075.a.b.b.b ENSGT00940000160001.h ENSGT00940000158095.l ENSGT00940000165836.d ENSGT00940000157061.b.k.a.a ENSGT00530000063371.C.b.a ENSGT00940000159222.k.b ENSGT00940000154735.d.a.a.b.a ENSGT00940000159595.o Coho salmon MODERN SPECIES 6 ENSOKIG00005021639 hspa9 (ENSOKIG00005021687) ENSOKIG00005021756 CSNK1A1 (ENSOKIG00005021812) #19 ENSOKIG00005021876 SIL1 (ENSOKIG00005021886) HNRNPA0 (ENSOKIG00005033788) ENSOKIG00005033804 KLHL3 (ENSOKIG00005033818) ENSOKIG00005033912 fam13b (ENSOKIG00005033929) cxcl14 (ENSOKIG00005033953) slit3 (ENSOKIG00005034059) ENSOKIG00005035500 ARHGEF37 (ENSOKIG00005035521) #20 ENSOKIG00005035536 #22 pde6a (ENSOKIG00005035700) SLC26A2 (ENSOKIG00005039024) #25 HTR4 (ENSOKIG00005039049) #10 ENSOKIG00005039073 adra1bb (ENSOKIG00005039100) egr1 (ENSOKIG00005039111) ENSOKIG00005039127 REEP2 (ENSOKIG00005039136) KDM3B (ENSOKIG00005039281) spon2a (ENSOKIG00005040581) ENSOKIG00005040598 FAM53C (ENSOKIG00005040651) ENSOKIG00005040671 hnrnpaba (ENSOKIG00005040704) nme5 (ENSOKIG00005040883) Chinook salmon MODERN SPECIES 32 hspa9 (ENSOTSG00005008985) fgfrl1b (ENSOTSG00005008995) ENSOTSG00005008996 csnk1a1 (ENSOTSG00005009001) #19 ENSOTSG00005009007 SIL1 (ENSOTSG00005009008) spdl1 (ENSOTSG00005009010) HNRNPA0 (ENSOTSG00005009011) ENSOTSG00005009012 KLHL3 (ENSOTSG00005009014) fam13b (ENSOTSG00005009017) cxcl14 (ENSOTSG00005009021) ENSOTSG00005009025 ENSOTSG00005009028 ARHGEF37 (ENSOTSG00005009031) #20 ENSOTSG00005009036 #22 pde6a (ENSOTSG00005009049) SLC26A2 (ENSOTSG00005011483) #25 HTR4 (ENSOTSG00005011484) #10 ENSOTSG00005011486 ENSOTSG00005011487 ADRA1B (ENSOTSG00005011489) egr1 (ENSOTSG00005011490) reep2 (ENSOTSG00005011491) KDM3B (ENSOTSG00005011502) spon2a (ENSOTSG00005016157) ENSOTSG00005016158 FAM53C (ENSOTSG00005016159) ENSOTSG00005016161 hnrnpaba (ENSOTSG00005016163) nme5 (ENSOTSG00005016165) Rainbow trout MODERN SPECIES 23 csnk1a1 (ENSOMYG00000016595) #19 ENSOMYG00000076093 ENSOMYG00000016608 ENSOMYG00000016618 spdl1 (ENSOMYG00000016627) ENSOMYG00000016653 ENSOMYG00000016664 ENSOMYG00000016685 fam13b (ENSOMYG00000016762) cxcl14 (ENSOMYG00000016815) slit3 (ENSOMYG00000062685) ENSOMYG00000059931 ENSOMYG00000073840 ENSOMYG00000075355 ARHGEF37 (ENSOMYG00000016893) #20 ENSOMYG00000016970 #22 pde6a (ENSOMYG00000017048) SLC26A2 (ENSOMYG00000017229) #25 ENSOMYG00000073240 ENSOMYG00000017243 #10 ENSOMYG00000068632 ENSOMYG00000017262 ENSOMYG00000017274 ENSOMYG00000055836 egr1 (ENSOMYG00000017282) REEP2 (ENSOMYG00000017302) ENSOMYG00000017441 ENSOMYG00000071803 ENSOMYG00000074318 FAM53C (ENSOMYG00000019784) ENSOMYG00000065710 Salmo ANCESTRAL SPECIES 47 ENSGT00510000046732.B ENSGT00920000149123.d.h.a ENSGT00940000156736.d.b.b ENSGT00390000013163.h #9 ENSGT00940000153700.f #19 ENSGT01030000234957 ENSGT00940000153909.b.c ENSGT00940000154808.a.b.n ENSGT00940000154808.a.b.m ENSGT00950000183123.p ENSGT00940000157891.c ENSGT00950000183033.a.b.b.p ENSGT00390000000618.b ENSGT00940000159322.g.b ENSGT00950000183088.a.a.j #20 ENSGT00950000183137.b.b.b #22 ENSGT00940000156471.b.c ENSGT01100000263544.c.a.a.a.c #25 ENSGT00940000155983.a.a.e #10 ENSGT00940000157139.a ENSGT00990000212007 ENSGT00950000182934.b ENSGT00940000156944.a.b.a ENSGT00940000165075.a.b.b.b ENSGT00940000160001.h ENSGT00940000158095.l ENSGT00940000165836.d ENSGT00940000157061.b.k.a.a ENSGT00530000063371.C.b.a ENSGT00990000212225 ENSGT00940000154735.d.a.a.b.a Atlantic salmon MODERN SPECIES 28 ENSSSAG00000091745 csnk1a1 (ENSSSAG00000047236) #19 ENSSSAG00000047219 ENSSSAG00000105748 ENSSSAG00000108175 ENSSSAG00000112982 hnrnpa0l (ENSSSAG00000121827) ENSSSAG00000047146 ENSSSAG00000047284 fam13b (ENSSSAG00000045061) cxcl14 (ENSSSAG00000044980) ENSSSAG00000098992 slit3 (ENSSSAG00000041168) ARHGEF37 (ENSSSAG00000040862) #20 ENSSSAG00000112742 ENSSSAG00000040843 #22 pde6a (ENSSSAG00000005113) SLC26A2 (ENSSSAG00000004653) #25 ENSSSAG00000092593 ENSSSAG00000004627 #10 ENSSSAG00000098308 ENSSSAG00000100455 egr1 (ENSSSAG00000004583) ENSSSAG00000111308 ENSSSAG00000004580 REEP2 (ENSSSAG00000107560) ENSSSAG00000002653 ENSSSAG00000002368 ENSSSAG00000102465 FAM53C (ENSSSAG00000040248) ENSSSAG00000040198 River trout MODERN SPECIES 4 hspa9 (ENSSTUG00000026641) fgfrl1b (ENSSTUG00000026623) csnk1a1 (ENSSTUG00000026284) #19 ENSSTUG00000026257 SIL1 (ENSSTUG00000015948) HNRNPA0 (ENSSTUG00000015893) HNRNPA0 (ENSSTUG00000015884) ENSSTUG00000015880 KLHL3 (ENSSTUG00000015762) fam13b (ENSSTUG00000015516) cxcl14 (ENSSTUG00000015479) ENSSTUG00000015470 slit3 (ENSSTUG00000013247) ENSSTUG00000013184 ARHGEF37 (ENSSTUG00000013119) #20 ENSSTUG00000013096 #22 pde6a (ENSSTUG00000012475) SLC26A2 (ENSSTUG00000012429) #25 HTR4 (ENSSTUG00000012413) #10 ENSSTUG00000012401 ENSSTUG00000012388 adra1bb (ENSSTUG00000012377) egr1 (ENSSTUG00000012364) reep2 (ENSSTUG00000012342) KDM3B (ENSSTUG00000010623) spon2a (ENSSTUG00000010549) ctbp1 (ENSSTUG00000010290) FAM53C (ENSSTUG00000010271) ENSSTUG00000010263 hnrnpaba (ENSSTUG00000010243) nme5 (ENSSTUG00000010213) Huchen MODERN SPECIES 1361 ENSHHUG00000033719 #22 pde6a (ENSHHUG00000033599) SLC26A2 (ENSHHUG00000033592) #25 ENSHHUG00000033591 HTR4 (ENSHHUG00000033581) #10 Northern pike MODERN SPECIES 3 ENSELUG00000014087 hspa9 (ENSELUG00000014148) fgfrl1b (ENSELUG00000014184) FBXO38 (ENSELUG00000014216) #9 csnk1a1 (ENSELUG00000014326) #19 ENSELUG00000014358 ENSELUG00000014369 spdl1 (ENSELUG00000014382) ENSELUG00000014407 ENSELUG00000014398 KLHL3 (ENSELUG00000014442) fam13b (ENSELUG00000014560) cxcl14 (ENSELUG00000014628) slit3 (ENSELUG00000014761) ARHGEF37 (ENSELUG00000014865) #20 ENSELUG00000014929 #22 pde6a (ENSELUG00000015021) SLC26A2 (ENSELUG00000015049) #25 HTR4 (ENSELUG00000015146) #10 ENSELUG00000015200 ENSELUG00000015211 adra1bb (ENSELUG00000015225) egr1 (ENSELUG00000015243) reep2 (ENSELUG00000027427) KDM3B (ENSELUG00000015328) spon2a (ENSELUG00000000562) ctbp1 (ENSELUG00000015366) FAM53C (ENSELUG00000015392) phykpl (ENSELUG00000015423) hnrnpaba (ENSELUG00000015443) nme5 (ENSELUG00000015464) Acanthomorphata ANCESTRAL SPECIES 214 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00510000048167.b.b ENSGT00940000177647 ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a ENSGT00510000046787.e.b ENSGT00940000163780 ENSGT00940000156583 ENSGT00940000165176 Euacanthomorphacea ANCESTRAL SPECIES 10 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT01020000231038 ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00940000177647 Pinecone sodierfish MODERN SPECIES 1 zgc:92045 (ENSMMDG00005006199) SRP72 (ENSMMDG00005006221) ENSMMDG00005006233 arl9 (ENSMMDG00005006236) hopx (ENSMMDG00005006238) SEC24B (ENSMMDG00005006347) TSTD2 (ENSMMDG00005011277) NCBP1 (ENSMMDG00005011295) SLC49A3 (ENSMMDG00005011858) PCGF3 (ENSMMDG00005011865) CPLX1 (ENSMMDG00005011868) ENSMMDG00005011872 SMU1 (ENSMMDG00005011879) CPXM1 (ENSMMDG00005011930) ARHGEF37 (ENSMMDG00005012737) #20 ENSMMDG00005012739 #22 pde6a (ENSMMDG00005012744) SLC26A2 (ENSMMDG00005012752) #25 HTR4 (ENSMMDG00005012756) #10 lman2 (ENSMMDG00005012932) FAT2 (ENSMMDG00005012940) mtnr1al (ENSMMDG00005012953) SLC36A1 (ENSMMDG00005012958) atox1 (ENSMMDG00005012967) sparc (ENSMMDG00005012973) g3bp1 (ENSMMDG00005013234) glra1 (ENSMMDG00005013250) slc25a48 (ENSMMDG00005013280) cplx2 (ENSMMDG00005013282) thoc3 (ENSMMDG00005013283) ENSMMDG00005013284 Percomorphaceae ANCESTRAL SPECIES 11 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00980000198740 Tiger tail seahorse MODERN SPECIES 332 zgc:136929 (ENSHCOG00000007124) spon2b (ENSHCOG00000000213) ENSHCOG00000007075 fgfrl1a (ENSHCOG00000007058) ENSHCOG00000007026 ENSHCOG00000006954 NCBP1 (ENSHCOG00000000204) SLC49A3 (ENSHCOG00000000199) PCGF3 (ENSHCOG00000006888) ENSHCOG00000006850 SMU1 (ENSHCOG00000006827) CPXM1 (ENSHCOG00000006762) GALNT8 (ENSHCOG00000006675) ELP1 (ENSHCOG00000006585) ARHGEF37 (ENSHCOG00000006428) #20 ENSHCOG00000006411 #22 pde6a (ENSHCOG00000006357) SLC26A2 (ENSHCOG00000006316) #25 HTR4 (ENSHCOG00000006309) #10 lman2 (ENSHCOG00000006284) FAT2 (ENSHCOG00000006160) mtnr1al (ENSHCOG00000005271) SLC36A1 (ENSHCOG00000005254) tmem35 (ENSHCOG00000005217) arl13a (ENSHCOG00000005206) xkrx (ENSHCOG00000005190) nox1 (ENSHCOG00000005180) cstf2 (ENSHCOG00000005157) ENSHCOG00000005140 tspan7 (ENSHCOG00000005093) SRPX2 (ENSHCOG00000005080) Percomorphaceae_B ANCESTRAL SPECIES 14 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00940000177647 Percomorphaceae_C ANCESTRAL SPECIES 16 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Percomorphaceae_D ANCESTRAL SPECIES 17 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Anabantaria ANCESTRAL SPECIES 15 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397.p ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Zig-zag eel MODERN SPECIES 1 ENSMAMG00000009773 ENSMAMG00000009818 SMU1 (ENSMAMG00000009833) ENSMAMG00000009876 ENSMAMG00000009905 ARHGEF37 (ENSMAMG00000009959) #20 ENSMAMG00000009976 #22 pde6a (ENSMAMG00000009992) SLC26A2 (ENSMAMG00000010041) #25 ENSMAMG00000010057 #10 ENSMAMG00000010079 ENSMAMG00000010102 ENSMAMG00000010137 mtnr1al (ENSMAMG00000010266) ENSMAMG00000025587 atox1 (ENSMAMG00000026452) sparc (ENSMAMG00000013092) g3bp1 (ENSMAMG00000013109) glra1 (ENSMAMG00000013123) ENSMAMG00000013141 slc25a48 (ENSMAMG00000025670) ENSMAMG00000013160 Anabantoidei ANCESTRAL SPECIES 11 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397.p ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b ENSGT00390000003288 Climbing perch MODERN SPECIES 1 ENSATEG00000006740 SRP72 (ENSATEG00000006781) ENSATEG00000006860 arl9 (ENSATEG00000006875) hopx (ENSATEG00000006884) ENSATEG00000006904 ENSATEG00000006920 ENSATEG00000006929 SLC49A3 (ENSATEG00000007020) ENSATEG00000007028 CPLX1 (ENSATEG00000007050) ENSATEG00000007066 ENSATEG00000007125 ENSATEG00000007178 ARHGEF37 (ENSATEG00000007496) #20 ENSATEG00000007544 #22 pde6a (ENSATEG00000007552) SLC26A2 (ENSATEG00000028621) #25 ENSATEG00000007639 #10 ENSATEG00000007679 ENSATEG00000007718 ENSATEG00000027884 ENSATEG00000026984 ENSATEG00000007867 ENSATEG00000025307 ENSATEG00000027419 ENSATEG00000029730 ENSATEG00000025880 ENSATEG00000026559 ENSATEG00000029862 ENSATEG00000026365 Siamese fighting fish MODERN SPECIES 1 ENSBSLG00000011219 ENSBSLG00000011226 ENSBSLG00000011231 hopx (ENSBSLG00000011239) SEC24B (ENSBSLG00000011246) TSTD2 (ENSBSLG00000011251) zgc:92045 (ENSBSLG00000011317) hopx (ENSBSLG00000011332) SEC24B (ENSBSLG00000011359) NCBP1 (ENSBSLG00000012706) SLC49A3 (ENSBSLG00000012717) PCGF3 (ENSBSLG00000012741) CPLX1 (ENSBSLG00000013046) SLC26A2 (ENSBSLG00000013143) #25 pde6a (ENSBSLG00000013481) ENSBSLG00000015167 #22 ENSBSLG00000015247 pde6a (ENSBSLG00000015328) SLC26A2 (ENSBSLG00000015748) #25 HTR4 (ENSBSLG00000016615) #10 ENSBSLG00000016655 lman2 (ENSBSLG00000016786) FAT2 (ENSBSLG00000017201) mtnr1al (ENSBSLG00000017576) ENSBSLG00000017594 SLC36A1 (ENSBSLG00000017616) ENSBSLG00000017773 atox1 (ENSBSLG00000017779) sparc (ENSBSLG00000017795) g3bp1 (ENSBSLG00000018181) glra1 (ENSBSLG00000018233) Carangaria ANCESTRAL SPECIES 15 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Carangaria_A ANCESTRAL SPECIES 17 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Seriola ANCESTRAL SPECIES 31 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00940000159060 ENSGT00940000153304.A ENSGT00940000159999 ENSGT00940000160111 ENSGT00940000157196 ENSGT00390000014020 ENSGT00940000164536.b Yellowtail amberjack MODERN SPECIES 2823 ENSSLDG00000006672 SMU1 (ENSSLDG00000006708) CPXM1 (ENSSLDG00000006768) ELP1 (ENSSLDG00000006808) ARHGEF37 (ENSSLDG00000007015) #20 ENSSLDG00000007085 #22 pde6a (ENSSLDG00000007116) SLC26A2 (ENSSLDG00000007189) #25 HTR4 (ENSSLDG00000007212) #10 lman2 (ENSSLDG00000007318) ENSSLDG00000007355 sfxn5b (ENSSLDG00000007383) ENSSLDG00000007429 Greater amberjack MODERN SPECIES 113 zgc:92045 (ENSSDUG00000007411) SRP72 (ENSSDUG00000007345) ENSSDUG00000007333 arl9 (ENSSDUG00000007325) hopx (ENSSDUG00000007322) SEC24B (ENSSDUG00000007195) TSTD2 (ENSSDUG00000007163) NCBP1 (ENSSDUG00000007019) SLC49A3 (ENSSDUG00000006977) PCGF3 (ENSSDUG00000006943) CPLX1 (ENSSDUG00000006922) SMU1 (ENSSDUG00000006891) CPXM1 (ENSSDUG00000006846) ELP1 (ENSSDUG00000006610) ARHGEF37 (ENSSDUG00000006552) #20 ENSSDUG00000006531 #22 pde6a (ENSSDUG00000006470) SLC26A2 (ENSSDUG00000006448) #25 HTR4 (ENSSDUG00000006394) #10 lman2 (ENSSDUG00000006357) FAT2 (ENSSDUG00000006306) mtnr1al (ENSSDUG00000006290) SLC36A1 (ENSSDUG00000006270) atox1 (ENSSDUG00000006254) sytl4 (ENSSDUG00000006223) trmt12 (ENSSDUG00000006168) zdhhc9 (ENSSDUG00000006121) SASH3 (ENSSDUG00000006109) xpnpep2 (ENSSDUG00000006081) apln (ENSSDUG00000006075) ENSSDUG00000006035 Barramundi perch MODERN SPECIES 90 hopx (ENSLCAG00010006086) ENSLCAG00010006080 SEC24B (ENSLCAG00010005589) TSTD2 (ENSLCAG00010005498) NCBP1 (ENSLCAG00010005186) SLC49A3 (ENSLCAG00010005103) PCGF3 (ENSLCAG00010005097) CPLX1 (ENSLCAG00010005092) SMU1 (ENSLCAG00010005083) CPXM1 (ENSLCAG00010004983) ARHGEF37 (ENSLCAG00010004912) #20 ENSLCAG00010004900 #22 pde6a (ENSLCAG00010004555) SLC26A2 (ENSLCAG00010004423) #25 HTR4 (ENSLCAG00010004387) #10 lman2 (ENSLCAG00010004365) b4galt1l (ENSLCAG00010004357) rest (ENSLCAG00010004353) noa1 (ENSLCAG00010004341) nipsnap3a (ENSLCAG00010004332) SLC44A1 (ENSLCAG00010004040) TBC1D2 (ENSLCAG00010004022) neurog1 (ENSLCAG00010004019) ENSLCAG00010004016 ENSLCAG00010004012 ENSLCAG00010003992 Pleuronectoidei ANCESTRAL SPECIES 19 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Tongue sole MODERN SPECIES 6 mtnr1al (ENSCSEG00000012507) SLC36A1 (ENSCSEG00000012497) atox1 (ENSCSEG00000012490) lman2 (ENSCSEG00000012470) ENSCSEG00000012461 SEC24B (ENSCSEG00000012444) TSTD2 (ENSCSEG00000012433) NCBP1 (ENSCSEG00000012377) SLC49A3 (ENSCSEG00000012355) PCGF3 (ENSCSEG00000012338) CPLX1 (ENSCSEG00000012329) SMU1 (ENSCSEG00000012301) CPXM1 (ENSCSEG00000012282) ELP1 (ENSCSEG00000012230) ARHGEF37 (ENSCSEG00000012208) #20 ENSCSEG00000012195 #22 pde6a (ENSCSEG00000012160) SLC26A2 (ENSCSEG00000012154) #25 ENSCSEG00000012144 klhl4 (ENSCSEG00000012115) ENSCSEG00000012101 ENSCSEG00000012094 eef1g (ENSCSEG00000012081) polr2g (ENSCSEG00000011991) si:ch211-175m2.5 (ENSCSEG00000011974) ENSCSEG00000011952 chrnb3b (ENSCSEG00000011925) ENSCSEG00000011943 ENSCSEG00000011902 ENSCSEG00000011885 RNF38 (ENSCSEG00000011864) Turbot MODERN SPECIES 4 ENSSMAG00000007171 ENSSMAG00000007195 ENSSMAG00000007161 ENSSMAG00000029533 ENSSMAG00000022996 ENSSMAG00000005557 ENSSMAG00000023620 ENSSMAG00000007111 ENSSMAG00000035076 ENSSMAG00000007094 ENSSMAG00000029890 ENSSMAG00000007084 ENSSMAG00000007074 ENSSMAG00000007035 ARHGEF37 (ENSSMAG00000006958) #20 ENSSMAG00000006930 #22 pde6a (ENSSMAG00000006883) SLC26A2 (ENSSMAG00000029056) #25 ENSSMAG00000030425 #10 ENSSMAG00000006358 ENSSMAG00000006434 mtnr1al (ENSSMAG00000025091) ENSSMAG00000006543 atox1 (ENSSMAG00000006562) ENSSMAG00000031040 sparc (ENSSMAG00000006598) g3bp1 (ENSSMAG00000006669) glra1 (ENSSMAG00000006718) ENSSMAG00000027427 slc25a48 (ENSSMAG00000006758) ENSSMAG00000006775 Eupercaria ANCESTRAL SPECIES 12 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Tetraodontidae ANCESTRAL SPECIES 104 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.a.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b ENSGT00390000003288 Fugu MODERN SPECIES 5 ENSTRUG00000031281 ENSTRUG00000029551 DGKQ (ENSTRUG00000002613) mgat4b (ENSTRUG00000001769) canx (ENSTRUG00000001564) ARHGEF37 (ENSTRUG00000003793) #20 ENSTRUG00000020349 #22 ENSTRUG00000033350 SLC26A2 (ENSTRUG00000001304) #25 HTR4 (ENSTRUG00000001258) #10 lman2 (ENSTRUG00000001185) FAT2 (ENSTRUG00000030114) mtnr1al (ENSTRUG00000027279) SLC36A1 (ENSTRUG00000027926) atox1 (ENSTRUG00000033174) sparc (ENSTRUG00000014364) g3bp1 (ENSTRUG00000024045) ENSTRUG00000024876 slc25a48 (ENSTRUG00000002430) cplx2 (ENSTRUG00000028930) thoc3 (ENSTRUG00000002925) ENSTRUG00000003172 Eupecaria_A ANCESTRAL SPECIES 13 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Ballan wrasse MODERN SPECIES 102 slit3 (ENSLBEG00000011327) ENSLBEG00000011442 SEC24B (ENSLBEG00000011497) TSTD2 (ENSLBEG00000011622) NCBP1 (ENSLBEG00000011661) SLC49A3 (ENSLBEG00000011741) PCGF3 (ENSLBEG00000011761) CPLX1 (ENSLBEG00000011797) SMU1 (ENSLBEG00000011824) CPXM1 (ENSLBEG00000011886) ELP1 (ENSLBEG00000011982) ARHGEF37 (ENSLBEG00000012222) #20 ENSLBEG00000012248 ENSLBEG00000012274 #22 pde6a (ENSLBEG00000012336) SLC26A2 (ENSLBEG00000012386) #25 HTR4 (ENSLBEG00000012464) #10 ENSLBEG00000012529 lman2 (ENSLBEG00000012552) FAT2 (ENSLBEG00000012608) mtnr1al (ENSLBEG00000012673) SLC36A1 (ENSLBEG00000012690) atox1 (ENSLBEG00000012711) sparc (ENSLBEG00000012779) g3bp1 (ENSLBEG00000012867) Eupecaria_B ANCESTRAL SPECIES 13 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Eupecaria_C ANCESTRAL SPECIES 12 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 39 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 European seabass MODERN SPECIES 12 ENSDLAG00005009788 ENSDLAG00005009764 ENSDLAG00005033882 ENSDLAG00005008783 ENSDLAG00005008646 SLC49A3 (ENSDLAG00005008614) ENSDLAG00005029679 CPLX1 (ENSDLAG00005032751) ENSDLAG00005027366 ENSDLAG00005008525 ENSDLAG00005007866 ENSDLAG00005007158 ENSDLAG00005007040 #20 ENSDLAG00005005266 ENSDLAG00005027021 ENSDLAG00005006987 #22 pde6a (ENSDLAG00005005603) ENSDLAG00005006975 #25 ENSDLAG00005023777 ENSDLAG00005027355 ENSDLAG00005005527 #10 ENSDLAG00005033359 ENSDLAG00005028816 ENSDLAG00005029554 ENSDLAG00005032297 ENSDLAG00005033517 ENSDLAG00005032711 ENSDLAG00005032474 ENSDLAG00005032714 ENSDLAG00005026399 ENSDLAG00005017922 Large yellow croaker MODERN SPECIES ENSLCRG00005015328 fgfrl1a (ENSLCRG00005015331) slit3 (ENSLCRG00005015375) arl9 (ENSLCRG00005018615) hopx (ENSLCRG00005018616) SEC24B (ENSLCRG00005018637) TSTD2 (ENSLCRG00005019981) NCBP1 (ENSLCRG00005019984) SLC49A3 (ENSLCRG00005019988) PCGF3 (ENSLCRG00005019989) CPLX1 (ENSLCRG00005019990) SMU1 (ENSLCRG00005019993) CPXM1 (ENSLCRG00005019998) ELP1 (ENSLCRG00005020427) ARHGEF37 (ENSLCRG00005020468) #20 ENSLCRG00005020469 #22 pde6a (ENSLCRG00005020486) SLC26A2 (ENSLCRG00005022159) #25 HTR4 (ENSLCRG00005022161) #10 lman2 (ENSLCRG00005022165) SLITRK4 (ENSLCRG00005022181) IQSEC1 (ENSLCRG00005022191) acad9 (ENSLCRG00005022380) ENSLCRG00005022410 EFCC1 (ENSLCRG00005022411) CFAP57 (ENSLCRG00005022412) nuf2 (ENSLCRG00005022415) FRMD4B (ENSLCRG00005022417) arl6ip5a (ENSLCRG00005022419) trnt1 (ENSLCRG00005022420) ENSLCRG00005022421 Gilthead seabream MODERN SPECIES 9 ENSSAUG00010008125 arl9 (ENSSAUG00010008124) zgc:92045 (ENSSAUG00010008123) SEC24B (ENSSAUG00010006430) TSTD2 (ENSSAUG00010006398) NCBP1 (ENSSAUG00010005242) ENSSAUG00010005239 SLC49A3 (ENSSAUG00010005238) PCGF3 (ENSSAUG00010005235) CPLX1 (ENSSAUG00010005234) ENSSAUG00010005232 SMU1 (ENSSAUG00010005230) CPXM1 (ENSSAUG00010005030) ELP1 (ENSSAUG00010005003) ARHGEF37 (ENSSAUG00010004993) #20 ENSSAUG00010004991 #22 pde6a (ENSSAUG00010002712) SLC26A2 (ENSSAUG00010002592) #25 HTR4 (ENSSAUG00010002579) #10 lman2 (ENSSAUG00010007219) FAT2 (ENSSAUG00010007168) mtnr1al (ENSSAUG00010007156) SLC36A1 (ENSSAUG00010007141) atox1 (ENSSAUG00010007132) sparc (ENSSAUG00010007127) g3bp1 (ENSSAUG00010007125) glra1 (ENSSAUG00010005865) ENSSAUG00010005845 slc25a48 (ENSSAUG00010005843) cplx2 (ENSSAUG00010005838) thoc3 (ENSSAUG00010005831) Perciformes ANCESTRAL SPECIES 13 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Perciformes_a ANCESTRAL SPECIES 11 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Pike perch MODERN SPECIES 32 zgc:92045 (ENSSLUG00000007947) SRP72 (ENSSLUG00000007979) ENSSLUG00000008303 arl9 (ENSSLUG00000008304) hopx (ENSSLUG00000008310) SEC24B (ENSSLUG00000008368) TSTD2 (ENSSLUG00000008846) NCBP1 (ENSSLUG00000008862) SLC49A3 (ENSSLUG00000008975) PCGF3 (ENSSLUG00000008977) CPLX1 (ENSSLUG00000008981) SMU1 (ENSSLUG00000008987) CPXM1 (ENSSLUG00000009022) ELP1 (ENSSLUG00000009626) ARHGEF37 (ENSSLUG00000010579) #20 PPARGC1B (ENSSLUG00000010596) #22 pde6a (ENSSLUG00000010640) SLC26A2 (ENSSLUG00000010734) #25 HTR4 (ENSSLUG00000010737) #10 ENSSLUG00000010741 lman2 (ENSSLUG00000010760) FAT2 (ENSSLUG00000010833) mtnr1al (ENSSLUG00000010923) SLC36A1 (ENSSLUG00000010933) atox1 (ENSSLUG00000010960) sparc (ENSSLUG00000010968) g3bp1 (ENSSLUG00000011015) glra1 (ENSSLUG00000011030) ENSSLUG00000011073 slc25a48 (ENSSLUG00000011075) cplx2 (ENSSLUG00000011079) Channel bull blenny MODERN SPECIES 1 nudt6 (ENSCGOG00000011211) ENSCGOG00000011207 SPATA5 (ENSCGOG00000010883) spry1 (ENSCGOG00000010870) ANKRD50 (ENSCGOG00000010864) ENSCGOG00000010859 ENSCGOG00000010857 ENSCGOG00000010854 FAT4 (ENSCGOG00000010848) arl9 (ENSCGOG00000010845) zgc:92045 (ENSCGOG00000010782) SRP72 (ENSCGOG00000010720) ENSCGOG00000010715 arl9 (ENSCGOG00000010714) ARHGEF37 (ENSCGOG00000010711) #20 ENSCGOG00000010710 #22 pde6a (ENSCGOG00000010593) SLC26A2 (ENSCGOG00000010540) #25 ENSCGOG00000010535 ENSCGOG00000010532 ENSCGOG00000010530 ENSCGOG00000010527 ENSCGOG00000010524 ENSCGOG00000010522 lman2 (ENSCGOG00000010320) FAT2 (ENSCGOG00000010291) mtnr1al (ENSCGOG00000010287) SLC36A1 (ENSCGOG00000010245) atox1 (ENSCGOG00000010243) sparc (ENSCGOG00000010219) g3bp1 (ENSCGOG00000009954) Cottioidei ANCESTRAL SPECIES 9 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00730000111972 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 Lumpfish MODERN SPECIES 1 ENSCLMG00005012816 SEC24B (ENSCLMG00005012849) TSTD2 (ENSCLMG00005015512) NCBP1 (ENSCLMG00005015513) SLC49A3 (ENSCLMG00005015520) SLC49A3 (ENSCLMG00005015526) ENSCLMG00005015528 PCGF3 (ENSCLMG00005015530) CPLX1 (ENSCLMG00005015531) SMU1 (ENSCLMG00005015532) ELP1 (ENSCLMG00005001759) ARHGEF37 (ENSCLMG00005003878) #20 ENSCLMG00005003883 ENSCLMG00005003884 ENSCLMG00005003887 ENSCLMG00005003888 #22 pde6a (ENSCLMG00005003890) SLC26A2 (ENSCLMG00005003895) #25 HTR4 (ENSCLMG00005003897) #10 lman2 (ENSCLMG00005003902) ENSCLMG00005003907 FAT2 (ENSCLMG00005003911) ENSCLMG00005004050 mtnr1al (ENSCLMG00005004051) SLC36A1 (ENSCLMG00005004052) atox1 (ENSCLMG00005004089) sparc (ENSCLMG00005004091) g3bp1 (ENSCLMG00005004122) glra1 (ENSCLMG00005004137) ENSCLMG00005004160 slc25a48 (ENSCLMG00005004162) Ovalentaria ANCESTRAL SPECIES 15 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00940000177647 Atherinomorphae ANCESTRAL SPECIES 9 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Oryzias ANCESTRAL SPECIES 17 ENSGT00940000162861 ENSGT00570000079101.a.b ENSGT00390000018691.d ENSGT00940000159397 ENSGT00940000169173 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Oryzias_b ANCESTRAL SPECIES 47 ENSGT00940000162861 ENSGT00570000079101.a.b ENSGT00390000018691.d ENSGT00940000159397 ENSGT00940000169173 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Javanese ricefish MODERN SPECIES 1 spdl1 (ENSOJAG00000003997) trappc11 (ENSOJAG00000003770) ENSOJAG00000003734 ENSOJAG00000003713 ENSOJAG00000003686 SEC24B (ENSOJAG00000003467) TSTD2 (ENSOJAG00000003442) NCBP1 (ENSOJAG00000003408) SLC49A3 (ENSOJAG00000003386) PCGF3 (ENSOJAG00000003363) CPLX1 (ENSOJAG00000003338) SMU1 (ENSOJAG00000003282) CPXM1 (ENSOJAG00000003183) ELP1 (ENSOJAG00000003026) ARHGEF37 (ENSOJAG00000003008) #20 ENSOJAG00000002980 #22 SLC26A2 (ENSOJAG00000002886) #25 pde6a (ENSOJAG00000002703) HTR4 (ENSOJAG00000002669) #10 lman2 (ENSOJAG00000002630) ENSOJAG00000002615 FAT2 (ENSOJAG00000002493) mtnr1al (ENSOJAG00000002461) SLC36A1 (ENSOJAG00000002330) atox1 (ENSOJAG00000002296) sparc (ENSOJAG00000002111) g3bp1 (ENSOJAG00000002007) glra1 (ENSOJAG00000001876) slc25a48 (ENSOJAG00000001835) ENSOJAG00000001821 cplx2 (ENSOJAG00000001813) Indian medaka MODERN SPECIES 37 nkx1.2lb (ENSOMEG00000020258) ENSOMEG00000020312 ENSOMEG00000020326 arl9 (ENSOMEG00000020346) ENSOMEG00000020360 SEC24B (ENSOMEG00000000762) TSTD2 (ENSOMEG00000000542) NCBP1 (ENSOMEG00000020698) SLC49A3 (ENSOMEG00000020739) PCGF3 (ENSOMEG00000020817) CPLX1 (ENSOMEG00000020838) SMU1 (ENSOMEG00000020867) CPXM1 (ENSOMEG00000020904) ELP1 (ENSOMEG00000021054) ARHGEF37 (ENSOMEG00000021154) #20 ENSOMEG00000021279 #22 pde6a (ENSOMEG00000021321) SLC26A2 (ENSOMEG00000021337) #25 HTR4 (ENSOMEG00000021442) #10 lman2 (ENSOMEG00000021496) FAT2 (ENSOMEG00000021558) mtnr1al (ENSOMEG00000021575) SLC36A1 (ENSOMEG00000021599) atox1 (ENSOMEG00000021626) sparc (ENSOMEG00000021664) g3bp1 (ENSOMEG00000021702) glra1 (ENSOMEG00000021793) ENSOMEG00000021833 slc25a48 (ENSOMEG00000021884) ENSOMEG00000021911 cplx2 (ENSOMEG00000021947) Oryzias_a ANCESTRAL SPECIES 65 ENSGT00940000162861 ENSGT00570000079101.a.b ENSGT00390000018691.d ENSGT00940000159397 ENSGT00940000169173 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583.g ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Chinese medaka MODERN SPECIES 34 spdl1 (ENSOSIG00000000106) ENSOSIG00000000083 ENSOSIG00000000071 ENSOSIG00000000051 arl9 (ENSOSIG00000000048) ENSOSIG00000000036 NCBP1 (ENSOSIG00000022065) SLC49A3 (ENSOSIG00000022051) ENSOSIG00000022038 PCGF3 (ENSOSIG00000022035) CPLX1 (ENSOSIG00000022031) SMU1 (ENSOSIG00000022021) CPXM1 (ENSOSIG00000021996) ELP1 (ENSOSIG00000021983) ENSOSIG00000021958 #20 ENSOSIG00000021944 #22 pde6a (ENSOSIG00000020371) ENSOSIG00000020266 HTR4 (ENSOSIG00000020263) #10 lman2 (ENSOSIG00000020257) ENSOSIG00000020253 FAT2 (ENSOSIG00000020244) Japanese Medaka HdrR MODERN SPECIES 1 ENSORLG00000010903 ENSORLG00000010910 ENSORLG00000010927 ENSORLG00000027441 ENSORLG00000010941 ENSORLG00000024622 TSTD2 (ENSORLG00000010950) NCBP1 (ENSORLG00000011008) SLC49A3 (ENSORLG00000011021) PCGF3 (ENSORLG00000011041) CPLX1 (ENSORLG00000026929) SMU1 (ENSORLG00000011072) CPXM1 (ENSORLG00000011088) ELP1 (ENSORLG00000011140) ARHGEF37 (ENSORLG00000011154) #20 ENSORLG00000011166 #22 pde6a (ENSORLG00000023972) SLC26A2 (ENSORLG00000011237) #25 HTR4 (ENSORLG00000011251) #10 lman2 (ENSORLG00000011264) ENSORLG00000011281 ENSORLG00000026927 mtnr1al (ENSORLG00000023936) SLC36A1 (ENSORLG00000011309) atox1 (ENSORLG00000022837) sparc (ENSORLG00000011369) g3bp1 (ENSORLG00000011422) glra1 (ENSORLG00000011468) slc25a48 (ENSORLG00000011483) ENSORLG00000011492 ENSORLG00000024576 Cyprinodontiformes ANCESTRAL SPECIES 8 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00510000048167.b.b Aplocheiloidei ANCESTRAL SPECIES 13 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000158129 ENSGT00510000048167.b.b ENSGT00390000003288 ENSGT00940000160403 Mangrove rivulus MODERN SPECIES 126 SRP72 (ENSKMAG00000003776) ENSKMAG00000003758 arl9 (ENSKMAG00000003749) ENSKMAG00000003742 SEC24B (ENSKMAG00000003692) TSTD2 (ENSKMAG00000003667) NCBP1 (ENSKMAG00000003594) SLC49A3 (ENSKMAG00000003518) PCGF3 (ENSKMAG00000003471) CPLX1 (ENSKMAG00000003461) SMU1 (ENSKMAG00000003389) CPXM1 (ENSKMAG00000003199) ELP1 (ENSKMAG00000003085) ARHGEF37 (ENSKMAG00000003012) #20 ENSKMAG00000003000 #22 pde6a (ENSKMAG00000002895) SLC26A2 (ENSKMAG00000002858) #25 HTR4 (ENSKMAG00000002836) #10 lman2 (ENSKMAG00000002789) ENSKMAG00000002772 FAT2 (ENSKMAG00000002653) mtnr1al (ENSKMAG00000002623) SLC36A1 (ENSKMAG00000002610) atox1 (ENSKMAG00000002592) sparc (ENSKMAG00000002580) g3bp1 (ENSKMAG00000002530) glra1 (ENSKMAG00000002468) Turquoise killifish MODERN SPECIES 1610 hopx (ENSNFUG00015002818) SEC24B (ENSNFUG00015002946) TSTD2 (ENSNFUG00015003334) NCBP1 (ENSNFUG00015003348) MFSD7 (ENSNFUG00015003383) ENSNFUG00015003387 CPLX1 (ENSNFUG00015003392) ENSNFUG00015003394 ENSNFUG00015003397 ENSNFUG00015003401 ENSNFUG00015003405 ENSNFUG00015003408 SMU1 (ENSNFUG00015003412) CU469518.1 (ENSNFUG00015003444) IKBKAP (ENSNFUG00015003549) PPARGC1B (ENSNFUG00015003601) #22 ENSNFUG00015003658 SLC26A2 (ENSNFUG00015003850) #25 ENSNFUG00015003852 ENSNFUG00015003857 ENSNFUG00015003868 HTR4 (ENSNFUG00015000208) #10 ENSNFUG00015000309 mtnr1al (ENSNFUG00015000375) SLC36A1 (ENSNFUG00015000398) ENSNFUG00015000428 sparc (ENSNFUG00015000443) G3BP1 (ENSNFUG00015000475) glra1 (ENSNFUG00015000524) ENSNFUG00015000567 ENSNFUG00015000569 Cyprinodontoidei ANCESTRAL SPECIES 23 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT01100000263513.a.a.b.b.b.b.a.a.b.a.d ENSGT00950000183071.a.b ENSGT00950000182897.B.a.b.a Poeciliinae ANCESTRAL SPECIES 11 ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT01100000263513.a.a.b.b.b.b.a.a.b.a.d ENSGT00950000183071.a.b ENSGT00950000182897.B.a.b.a Poecilia ANCESTRAL SPECIES 33 ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT01100000263513.a.a.b.b.b.b.a.a.b.a.d ENSGT00950000183071.a.b ENSGT00950000182897.B.a.b.a NAME_6 ANCESTRAL SPECIES 41 ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT01100000263513.a.a.b.b.b.b.a.a.b.a.d ENSGT00950000183071.a.b ENSGT00950000182897.B.a.b.a Amazon molly MODERN SPECIES 319 ENSPFOG00000005612 #22 pde6a (ENSPFOG00000005692) SLC26A2 (ENSPFOG00000006250) #25 HTR4 (ENSPFOG00000006342) #10 lman2 (ENSPFOG00000006470) FAT2 (ENSPFOG00000006694) mtnr1al (ENSPFOG00000024813) SLC36A1 (ENSPFOG00000007576) atox1 (ENSPFOG00000007849) sparc (ENSPFOG00000007866) g3bp1 (ENSPFOG00000007942) glra1 (ENSPFOG00000008160) slc25a48 (ENSPFOG00000008394) ENSPFOG00000008455 hs6st2 (ENSPFOG00000008569) mbnl3 (ENSPFOG00000008576) Sailfin molly MODERN SPECIES 831 ELP1 (ENSPLAG00000022359) ARHGEF37 (ENSPLAG00000022292) #20 ENSPLAG00000022284 #22 pde6a (ENSPLAG00000022276) SLC26A2 (ENSPLAG00000022230) #25 HTR4 (ENSPLAG00000022222) #10 Guppy MODERN SPECIES 440 rhogc (ENSPREG00000007175) ENSPREG00000007310 kctd12b (ENSPREG00000007319) znf711 (ENSPREG00000007328) zgc:66447 (ENSPREG00000007346) SLC25A53 (ENSPREG00000007377) prps1b (ENSPREG00000007387) FRMPD3 (ENSPREG00000007423) ENSPREG00000007456 irg1l (ENSPREG00000007475) zgc:174917 (ENSPREG00000007492) SMU1 (ENSPREG00000007516) CPXM1 (ENSPREG00000007548) ELP1 (ENSPREG00000007602) ARHGEF37 (ENSPREG00000007695) #20 ENSPREG00000007743 #22 pde6a (ENSPREG00000007789) SLC26A2 (ENSPREG00000007894) #25 HTR4 (ENSPREG00000007913) #10 ENSPREG00000007943 lman2 (ENSPREG00000007962) FAT2 (ENSPREG00000007999) mtnr1al (ENSPREG00000008094) SLC36A1 (ENSPREG00000008299) atox1 (ENSPREG00000008315) sparc (ENSPREG00000008334) g3bp1 (ENSPREG00000008376) glra1 (ENSPREG00000008393) slc25a48 (ENSPREG00000008440) ENSPREG00000008476 hs6st2 (ENSPREG00000008516) Platyfish MODERN SPECIES 15 zgc:92045 (ENSXMAG00000026585) ENSXMAG00000019976 ARL9 (ENSXMAG00000018339) ENSXMAG00000019975 SEC24B (ENSXMAG00000018296) TSTD2 (ENSXMAG00000018284) NCBP1 (ENSXMAG00000018253) SLC49A3 (ENSXMAG00000018242) PCGF3 (ENSXMAG00000018235) CPLX1 (ENSXMAG00000018230) ENSXMAG00000024180 SMU1 (ENSXMAG00000019096) CPXM1 (ENSXMAG00000019113) ELP1 (ENSXMAG00000019128) ARHGEF37 (ENSXMAG00000019168) #20 ENSXMAG00000019179 #22 pde6a (ENSXMAG00000019181) SLC26A2 (ENSXMAG00000019224) #25 HTR4 (ENSXMAG00000019228) #10 fabp4a (ENSXMAG00000028083) lman2 (ENSXMAG00000019231) FAT2 (ENSXMAG00000019238) mtnr1al (ENSXMAG00000019248) SLC36A1 (ENSXMAG00000019249) atox1 (ENSXMAG00000019253) ENSXMAG00000022019 sparc (ENSXMAG00000019254) g3bp1 (ENSXMAG00000019255) glra1 (ENSXMAG00000019257) ENSXMAG00000022787 slc25a48 (ENSXMAG00000028496) NAME_4 ANCESTRAL SPECIES 23 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT01100000263513.a.a.b.b.b.b.a.a.b.a.d ENSGT00950000183071.a.b ENSGT00950000182897.B.a.b.a Sheepshead minnow MODERN SPECIES 1660 ENSCVAG00000021822 #22 Mummichog MODERN SPECIES 2190 TSTD2 (ENSFHEG00000013350) NCBP1 (ENSFHEG00000000655) SLC49A3 (ENSFHEG00000000714) PCGF3 (ENSFHEG00000013546) CPLX1 (ENSFHEG00000013548) SMU1 (ENSFHEG00000013585) CPXM1 (ENSFHEG00000013615) ELP1 (ENSFHEG00000013864) ARHGEF37 (ENSFHEG00000013887) #20 ENSFHEG00000013904 #22 pde6a (ENSFHEG00000013968) SLC26A2 (ENSFHEG00000014001) #25 HTR4 (ENSFHEG00000014052) #10 lman2 (ENSFHEG00000014092) ENSFHEG00000014102 FAT2 (ENSFHEG00000014164) mtnr1al (ENSFHEG00000014772) SLC36A1 (ENSFHEG00000014799) atox1 (ENSFHEG00000014808) sparc (ENSFHEG00000014851) g3bp1 (ENSFHEG00000014921) glra1 (ENSFHEG00000014957) slc25a48 (ENSFHEG00000014982) ENSFHEG00000015012 hs6st2 (ENSFHEG00000015019) Ovalentaria_B ANCESTRAL SPECIES 13 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00940000177647 Cichlidae ANCESTRAL SPECIES 88 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00530000063506.A ENSGT00390000011725.c ENSGT00390000010318 ENSGT00390000002781 ENSGT00940000177214 ENSGT00940000158554 ENSGT00940000157465 ENSGT01050000244840.A.b.a ENSGT00940000158869 ENSGT00940000164810 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 Pseudocrenilabrinae ANCESTRAL SPECIES 27 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00510000046787.e.b ENSGT00940000163780 ENSGT00940000156583 ENSGT00940000165176 ENSGT00940000158507 ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00940000177647 Pseudocrenilabrinae_A ANCESTRAL SPECIES 31 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00510000046787.e.b ENSGT00940000163780 ENSGT00940000156583 ENSGT00940000165176 ENSGT00940000158507 ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 ENSGT00940000177647 Haplochromini ANCESTRAL SPECIES 25 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b.d ENSGT00940000156471.b.b.c ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00510000046787.e.b ENSGT00940000163780 ENSGT00940000156583 ENSGT00940000165176 ENSGT00940000158507 ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 Haplochromini_A ANCESTRAL SPECIES 28 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b.d ENSGT00940000156471.b.b.c ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00510000046787.e.b ENSGT00940000163780 ENSGT00940000156583 ENSGT00940000165176 ENSGT00940000158507 ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 Haplochromini_B ANCESTRAL SPECIES 45 ENSGT00940000166278.B.b.b.e.b.a ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b.d ENSGT00940000156471.b.b.c ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00510000046787.e.b ENSGT00940000163780 ENSGT00940000156583 ENSGT00940000165176 ENSGT00940000158507 ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 Zebra mbuna MODERN SPECIES 21 ENSMZEG00005022264 ENSMZEG00005022267 ENSMZEG00005022270 ENSMZEG00005022273 ENSMZEG00005022279 #22 ENSMZEG00005022284 Eastern happy MODERN SPECIES 11 TBC1D9B (ENSACLG00000018821) ENSACLG00000018802 sqstm1 (ENSACLG00000018790) ENSACLG00000018772 selenot2 (ENSACLG00000018738) ENSACLG00000018714 igfbp7 (ENSACLG00000018703) polr2b (ENSACLG00000018568) hspa9 (ENSACLG00000018511) ENSACLG00000018450 ENSACLG00000018444 ENSACLG00000018438 SLITRK2 (ENSACLG00000018391) ENSACLG00000018344 ENSACLG00000018304 ENSACLG00000018214 #22 ENSACLG00000018203 pde6a (ENSACLG00000018110) SLC26A2 (ENSACLG00000018100) #25 HTR4 (ENSACLG00000018039) #10 lman2 (ENSACLG00000017897) sparc (ENSACLG00000017854) atox1 (ENSACLG00000017840) ENSACLG00000017836 SLC36A1 (ENSACLG00000017816) ENSACLG00000017808 mtnr1al (ENSACLG00000017502) FAT2 (ENSACLG00000017446) g3bp1 (ENSACLG00000017400) glra1 (ENSACLG00000017381) ENSACLG00000017366 P. nyererei MODERN SPECIES 403 SLITRK2 (ENSPNYG00000002279) ENSPNYG00000002297 ENSPNYG00000002312 #22 pde6a (ENSPNYG00000002332) HTR4 (ENSPNYG00000002465) #10 lman2 (ENSPNYG00000002508) sparc (ENSPNYG00000002557) atox1 (ENSPNYG00000002572) SLC36A1 (ENSPNYG00000002584) mtnr1al (ENSPNYG00000002639) FAT2 (ENSPNYG00000002951) g3bp1 (ENSPNYG00000003109) glra1 (ENSPNYG00000003130) Burton s mouthbrooder MODERN SPECIES 980 ENSHBUG00000018253 #22 pde6a (ENSHBUG00000018199) SLC26A2 (ENSHBUG00000018134) #25 Lyretail cichlid MODERN SPECIES 341 ENSNBRG00000014405 #22 pde6a (ENSNBRG00000014374) SLC26A2 (ENSNBRG00000014354) #25 HTR4 (ENSNBRG00000014298) #10 lman2 (ENSNBRG00000014278) sparc (ENSNBRG00000014248) atox1 (ENSNBRG00000014234) SLC36A1 (ENSNBRG00000014207) mtnr1al (ENSNBRG00000014190) FAT2 (ENSNBRG00000014129) g3bp1 (ENSNBRG00000014110) glra1 (ENSNBRG00000014047) slc25a48 (ENSNBRG00000014029) ENSNBRG00000013981 ENSNBRG00000013963 cplx2 (ENSNBRG00000013942) Nile tilapia MODERN SPECIES 11 igbp1 (ENSONIG00000011522) FBXO38 (ENSONIG00000011523) #9 csnk1a1 (ENSONIG00000011528) #19 ENSONIG00000029967 STOX2 (ENSONIG00000011533) ENSONIG00000038886 enpp6 (ENSONIG00000011534) ENSONIG00000029557 ENSONIG00000032090 ENSONIG00000043068 naa15a (ENSONIG00000011538) mlsl (ENSONIG00000011547) ENSONIG00000037440 ENSONIG00000037021 ENSONIG00000035619 ENSONIG00000032092 #22 pde6a (ENSONIG00000004214) SLC26A2 (ENSONIG00000004222) #25 ENSONIG00000037809 ENSONIG00000039130 HTR4 (ENSONIG00000004225) #10 SLITRK2 (ENSONIG00000021252) hspa9 (ENSONIG00000004081) ENSONIG00000028405 hars (ENSONIG00000011548) ENSONIG00000038275 dnd1 (ENSONIG00000035317) gfra3 (ENSONIG00000042785) ENSONIG00000040678 ENSONIG00000039812 ENSONIG00000034918 Midas cichlid MODERN SPECIES 369 ENSACIG00000009609 POLR2B (ENSACIG00000009631) igfbp7 (ENSACIG00000009680) ENSACIG00000009737 selenot2 (ENSACIG00000009766) ENSACIG00000009797 sqstm1 (ENSACIG00000009826) ENSACIG00000009878 TBC1D9B (ENSACIG00000009896) rnf130 (ENSACIG00000009953) F2RL3 (ENSACIG00000010006) ENSACIG00000010029 ENSACIG00000010171 ENSACIG00000010192 #20 ENSACIG00000010231 #22 ENSACIG00000010273 pde6a (ENSACIG00000010282) ENSACIG00000010335 thoc3 (ENSACIG00000010364) cplx2 (ENSACIG00000010376) Pomacentridae ANCESTRAL SPECIES 58 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.b ENSGT00940000156471.b.a.a ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT00940000158129 Pomacentridae_A ANCESTRAL SPECIES 60 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B ENSGT00390000013344 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.a.a ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT01090000260059.a.b.b.b.a.d.a.a.b.b.a ENSGT00940000158129 Amphiprion ANCESTRAL SPECIES 86 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00390000018691.d ENSGT00940000159397 ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00940000155007.n.a ENSGT00940000156141.B.g ENSGT00390000013344.g.a ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.a.a ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b ENSGT00390000011365.a ENSGT00940000159047.d ENSGT00940000159354 ENSGT00950000182938.b.b.a ENSGT01090000260059.a.b.b.b.a.d.a.a.b.b.a.b ENSGT00940000158129 Orange clownfish MODERN SPECIES 4 zgc:92045 (ENSAPEG00000001486) SRP72 (ENSAPEG00000001512) ENSAPEG00000001581 arl9 (ENSAPEG00000001590) hopx (ENSAPEG00000001616) SEC24B (ENSAPEG00000001631) TSTD2 (ENSAPEG00000001671) NCBP1 (ENSAPEG00000001701) SLC49A3 (ENSAPEG00000001779) PCGF3 (ENSAPEG00000001795) CPLX1 (ENSAPEG00000001826) SMU1 (ENSAPEG00000001841) CPXM1 (ENSAPEG00000001894) ELP1 (ENSAPEG00000001949) ARHGEF37 (ENSAPEG00000001968) #20 ENSAPEG00000002056 #22 ENSAPEG00000002065 ENSAPEG00000002142 ENSAPEG00000002162 pde6a (ENSAPEG00000002213) SLC26A2 (ENSAPEG00000002310) #25 HTR4 (ENSAPEG00000002336) #10 lman2 (ENSAPEG00000002391) FAT2 (ENSAPEG00000002455) mtnr1al (ENSAPEG00000002565) ENSAPEG00000002913 SLC36A1 (ENSAPEG00000002957) atox1 (ENSAPEG00000003010) sparc (ENSAPEG00000003035) g3bp1 (ENSAPEG00000003082) glra1 (ENSAPEG00000003138) Clown anemonefish MODERN SPECIES 2011 ENSAOCG00000011787 #22 Spiny chromis MODERN SPECIES 1341 ENSAPOG00000013988 #22 Bicolor damselfish MODERN SPECIES 323 SMU1 (ENSSPAG00000001935) CPXM1 (ENSSPAG00000001718) ELP1 (ENSSPAG00000001634) ARHGEF37 (ENSSPAG00000001607) #20 ENSSPAG00000001592 #22 pde6a (ENSSPAG00000001524) SLC26A2 (ENSSPAG00000001477) #25 HTR4 (ENSSPAG00000001441) #10 Cod MODERN SPECIES 1 ENSGMOG00000030659 ENSGMOG00000032065 ENSGMOG00000035215 ENSGMOG00000000314 ENSGMOG00000012256 ENSGMOG00000012259 ENSGMOG00000036362 b4galt7 (ENSGMOG00000014786) ENSGMOG00000014778 ENSGMOG00000011405 ENSGMOG00000005071 ENSGMOG00000019046 ENSGMOG00000024289 ENSGMOG00000026293 ARHGEF37 (ENSGMOG00000014487) #20 ENSGMOG00000030539 #22 pde6a (ENSGMOG00000013630) SLC26A2 (ENSGMOG00000013680) #25 ENSGMOG00000034137 #10 ENSGMOG00000014209 ENSGMOG00000037214 ENSGMOG00000019136 ENSGMOG00000019154 slc25a48 (ENSGMOG00000019144) glra1 (ENSGMOG00000015249) g3bp1 (ENSGMOG00000019345) sparc (ENSGMOG00000019341) atox1 (ENSGMOG00000023345) ENSGMOG00000027688 mtnr1al (ENSGMOG00000017372) ENSGMOG00000017306 Otomorpha ANCESTRAL SPECIES 34 ENSGT00940000153147.a.b ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000159322 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000159747 ENSGT00940000157712 ENSGT00980000203236 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b Clupeiformes ANCESTRAL SPECIES 37 ENSGT00420000029769.b ENSGT00390000012574 ENSGT00940000158241 ENSGT00390000010773 ENSGT00940000154672 ENSGT00940000170113 ENSGT00940000156418 ENSGT00940000156495 ENSGT00390000000470.n ENSGT00390000005639.a.a.m ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000159322 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000159747 ENSGT00940000157712 ENSGT00980000203236 ENSGT00940000157425.A ENSGT00950000183026.A.a.b ENSGT00390000003288 ENSGT00940000158507 ENSGT00940000165176 ENSGT00940000156583 ENSGT00940000163780 ENSGT00510000046787.e.b Denticle herring MODERN SPECIES 9 tmem144b (ENSDCDG00000025000) rxfp1 (ENSDCDG00000025029) etfdh (ENSDCDG00000025059) ppid (ENSDCDG00000026598) ENSDCDG00000026600 RAPGEF2 (ENSDCDG00000026686) fstl5 (ENSDCDG00000030629) qdpra (ENSDCDG00000030633) ldb2a (ENSDCDG00000030637) KLHL3 (ENSDCDG00000030693) fam13b (ENSDCDG00000030710) cxcl14 (ENSDCDG00000030730) slit3 (ENSDCDG00000030972) ENSDCDG00000033534 ARHGEF37 (ENSDCDG00000033535) #20 ENSDCDG00000033537 #22 pde6a (ENSDCDG00000033541) SLC26A2 (ENSDCDG00000033556) #25 HTR4 (ENSDCDG00000033559) #10 lman2 (ENSDCDG00000033561) tmed9 (ENSDCDG00000033562) b4galt7 (ENSDCDG00000033566) emx3 (ENSDCDG00000033567) ENSDCDG00000033569 gm2a (ENSDCDG00000033571) FAT2 (ENSDCDG00000033575) mtnr1al (ENSDCDG00000033618) SLC36A1 (ENSDCDG00000033621) atox1 (ENSDCDG00000033625) sparc (ENSDCDG00000033630) g3bp1 (ENSDCDG00000033635) Atlantic herring MODERN SPECIES 22 RAPGEF2 (ENSCHAG00000019881) ENSCHAG00000019832 RAPGEF2 (ENSCHAG00000019369) fstl5 (ENSCHAG00000018863) qdpra (ENSCHAG00000018755) ENSCHAG00000018698 ENSCHAG00000018684 ENSCHAG00000018664 ENSCHAG00000018638 ENSCHAG00000018570 fam13b (ENSCHAG00000018487) cxcl14 (ENSCHAG00000018407) ENSCHAG00000018392 slit3 (ENSCHAG00000014782) ARHGEF37 (ENSCHAG00000014629) #20 ENSCHAG00000014619 #22 pde6a (ENSCHAG00000014049) SLC26A2 (ENSCHAG00000014030) #25 HTR4 (ENSCHAG00000013996) #10 HTR4 (ENSCHAG00000013829) #10 lman2 (ENSCHAG00000013600) ppid (ENSCHAG00000013565) etfdh (ENSCHAG00000012168) rxfp1 (ENSCHAG00000012038) ENSCHAG00000012028 TMEM144 (ENSCHAG00000012018) GASK1B (ENSCHAG00000012009) ENSCHAG00000011994 gria2b (ENSCHAG00000009528) glrbb (ENSCHAG00000009369) PDGFC (ENSCHAG00000009210) Otophysi ANCESTRAL SPECIES 43 ENSGT00940000162301 ENSGT00940000155070.a.b.a ENSGT00940000154808.a.b.j.a ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000159322 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000153322.B.d.a ENSGT01030000235165 ENSGT00940000153899.a.a ENSGT00980000198740 ENSGT00510000048167.b.b ENSGT00940000177647 ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a ENSGT00510000046787.e.b Characiphysae ANCESTRAL SPECIES 7 ENSGT00940000164681 ENSGT00390000011180 ENSGT00940000164878.a ENSGT00940000158778.d ENSGT00950000183162.a.a.d ENSGT00940000159674 ENSGT00940000162301 ENSGT00940000155070.a.b.a ENSGT00940000165646.B ENSGT00940000154808.a.b.j.a ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000159322 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000153322.B.d.a ENSGT01030000235165 ENSGT00940000153899.a.a ENSGT00510000048167.b.b ENSGT00940000177647 ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a ENSGT00510000046787.e.b ENSGT00940000163780 Channel catfish MODERN SPECIES 27 trpt1 (ENSIPUG00000002573) Ctsf (ENSIPUG00000002485) ENSIPUG00000002477 eif1ad (ENSIPUG00000002466) nrg2b (ENSIPUG00000002217) PURA (ENSIPUG00000002191) PSD2 (ENSIPUG00000002104) CHRM1 (ENSIPUG00000002079) dpf2l (ENSIPUG00000002015) ENSIPUG00000001991 klhl3 (ENSIPUG00000001973) fam13b (ENSIPUG00000001891) cxcl14 (ENSIPUG00000001869) slit3 (ENSIPUG00000001656) arhgef37 (ENSIPUG00000001613) #20 Ppargc1b (ENSIPUG00000001584) #22 PDE6A (ENSIPUG00000001474) slc26a2 (ENSIPUG00000001460) #25 HTR4 (ENSIPUG00000001401) #10 ENSIPUG00000001366 tmem216 (ENSIPUG00000001353) ENSIPUG00000001321 ENSIPUG00000001315 thoc3 (ENSIPUG00000001292) cplx2 (ENSIPUG00000001281) slc25a48 (ENSIPUG00000001259) glra1 (ENSIPUG00000001240) G3BP (ENSIPUG00000001190) sparc (ENSIPUG00000001149) atox1 (ENSIPUG00000001118) SLC36A1 (ENSIPUG00000001090) Characiphysae_b ANCESTRAL SPECIES 7 ENSGT00390000002731 ENSGT00940000164681 ENSGT00390000011180 ENSGT00940000164878.a ENSGT00940000158778.d ENSGT00950000183162.a.a.d ENSGT00940000159674 ENSGT00940000162301 ENSGT00940000155070.a.b.a ENSGT00940000154808.a.b.j.a ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000159322 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000153322.B.d.a ENSGT01030000235165 ENSGT00940000153899.a.a ENSGT00510000048167.b.b ENSGT00940000177647 ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a ENSGT00510000046787.e.b ENSGT00940000163780 Characoidei ANCESTRAL SPECIES 2 ENSGT00390000002731 ENSGT00940000164681 ENSGT00390000011180 ENSGT00940000164878.a ENSGT00940000158778.d ENSGT00950000183162.a.a.d ENSGT00940000159674 ENSGT00940000162301 ENSGT00940000155070.a.b.a ENSGT00940000154808.a.b.j.a ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000159322 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000153322.B.d.a ENSGT01030000235165 ENSGT00940000153899.a.a ENSGT00510000048167.b.b ENSGT00940000177647 ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a ENSGT00510000046787.e.b ENSGT00940000163780 Red-bellied piranha MODERN SPECIES 14 ENSPNAG00000023068 ehd1a (ENSPNAG00000023091) ubxn1 (ENSPNAG00000023105) ENSPNAG00000023116 GANAB (ENSPNAG00000023237) INTS5 (ENSPNAG00000023251) rarres3l (ENSPNAG00000023261) CHRM1 (ENSPNAG00000023269) dpf2l (ENSPNAG00000023318) HNRNPA0 (ENSPNAG00000023333) KLHL3 (ENSPNAG00000023373) fam13b (ENSPNAG00000023431) cxcl14 (ENSPNAG00000023529) slit3 (ENSPNAG00000023714) ARHGEF37 (ENSPNAG00000023761) #20 ENSPNAG00000023871 #22 pde6a (ENSPNAG00000024013) SLC26A2 (ENSPNAG00000024034) #25 HTR4 (ENSPNAG00000024109) #10 ENSPNAG00000024173 ENSPNAG00000024218 tmem216 (ENSPNAG00000024234) ENSPNAG00000024298 ENSPNAG00000024308 thoc3 (ENSPNAG00000005252) cplx2 (ENSPNAG00000024357) slc25a48 (ENSPNAG00000024397) glra1 (ENSPNAG00000024478) g3bp1 (ENSPNAG00000024583) sparc (ENSPNAG00000024599) atox1 (ENSPNAG00000024625) Mexicana tetra MODERN SPECIES 16 trpt1 (ENSAMXG00000010533) ctsf (ENSAMXG00000010535) eif1ad (ENSAMXG00000010537) ENSAMXG00000024947 nrg2b (ENSAMXG00000037440) PURA (ENSAMXG00000024949) PSD2 (ENSAMXG00000036801) CHRM1 (ENSAMXG00000029040) dpf2l (ENSAMXG00000034779) ENSAMXG00000024951 KLHL3 (ENSAMXG00000010572) fam13b (ENSAMXG00000010577) cxcl14 (ENSAMXG00000030504) slit3 (ENSAMXG00000010608) ARHGEF37 (ENSAMXG00000010660) #20 ENSAMXG00000010665 #22 pde6a (ENSAMXG00000010673) SLC26A2 (ENSAMXG00000040557) #25 HTR4 (ENSAMXG00000031787) #10 ENSAMXG00000029033 ENSAMXG00000010681 ENSAMXG00000010682 ENSAMXG00000010685 tmem216 (ENSAMXG00000010702) ENSAMXG00000010728 thoc3 (ENSAMXG00000010750) cplx2 (ENSAMXG00000010761) slc25a48 (ENSAMXG00000039070) glra1 (ENSAMXG00000042508) g3bp1 (ENSAMXG00000010833) sparc (ENSAMXG00000029677) Electric eel MODERN SPECIES 70 trpt1 (ENSEEEG00000014131) ctsf (ENSEEEG00000014133) eif1ad (ENSEEEG00000014135) ENSEEEG00000014136 nrg2b (ENSEEEG00000014139) PURA (ENSEEEG00000014142) PSD2 (ENSEEEG00000014147) ENSEEEG00000014152 dpf2l (ENSEEEG00000014163) ENSEEEG00000014178 KLHL3 (ENSEEEG00000014180) fam13b (ENSEEEG00000014184) cxcl14 (ENSEEEG00000014199) slit3 (ENSEEEG00000014211) ARHGEF37 (ENSEEEG00000014219) #20 ENSEEEG00000014222 #22 pde6a (ENSEEEG00000014228) SLC26A2 (ENSEEEG00000014256) #25 HTR4 (ENSEEEG00000014266) #10 tmem216 (ENSEEEG00000014270) ENSEEEG00000014274 ENSEEEG00000014280 ENSEEEG00000014282 ENSEEEG00000014285 thoc3 (ENSEEEG00000014288) cplx2 (ENSEEEG00000014289) slc25a48 (ENSEEEG00000014291) glra1 (ENSEEEG00000014294) g3bp1 (ENSEEEG00000014297) sparc (ENSEEEG00000014307) atox1 (ENSEEEG00000014358) Cyprinoidei ANCESTRAL SPECIES 9 ENSGT00940000157037.a.d ENSGT00940000164716.A ENSGT00940000154998.a.b.k ENSGT00390000005989.a.b.b ENSGT00940000158996 ENSGT00390000014412.l ENSGT00940000162301 ENSGT00940000155070.a.b.a ENSGT00940000153147.a.b ENSGT00940000154808.a.b.j.a ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618.d ENSGT00940000159322 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b.h ENSGT00940000155983.a.a #10 ENSGT01100000263544.c.a.a.a #25 ENSGT00510000048167.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a ENSGT00940000159354 ENSGT00940000159047.d ENSGT00390000011365.a ENSGT00510000046787.e.b ENSGT00940000163780 ENSGT00940000156583 ENSGT00940000165176 ENSGT00940000158507 ENSGT00390000003288.s Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 866 ENSGT00950000183137.b.b.c #22 ENSGT00940000156471.b.g ENSGT00940000153899.a.a ENSGT01030000235165.b ENSGT00940000153322.B.d.a.s ENSGT00940000155983.a.a.c #10 ENSGT01100000263544.c.a.a.a.a #25 Cyprininae_a ANCESTRAL SPECIES 503 ENSGT00940000155070.a.b.a.a ENSGT00940000153147.a.b ENSGT00940000157891.b ENSGT00950000183033.a.b.b.d ENSGT00390000000618.d ENSGT00940000159322.f ENSGT00950000183088.a.a.f #20 ENSGT00950000183137.b.b.c #22 ENSGT00940000156471.b.g ENSGT00940000153899.a.a ENSGT01030000235165.b ENSGT00940000153322.B.d.a.s ENSGT00940000155983.a.a.c #10 ENSGT01100000263544.c.a.a.a.a #25 Golden-line barbel MODERN SPECIES 300 RAB32 (ENSSGRG00000031856) GRM1 (ENSSGRG00000031853) cep57l1 (ENSSGRG00000031851) sesn1 (ENSSGRG00000031708) ARMC2 (ENSSGRG00000031706) foxo3b (ENSSGRG00000031705) afg1lb (ENSSGRG00000031704) snx3 (ENSSGRG00000031702) nr2e1 (ENSSGRG00000031701) OSTM1 (ENSSGRG00000031700) sec63 (ENSSGRG00000031608) SCML4 (ENSSGRG00000031605) ENSSGRG00000031604 ENSSGRG00000031603 #20 ENSSGRG00000031602 #20 ENSSGRG00000031601 #22 pde6a (ENSSGRG00000031101) tmem216 (ENSSGRG00000031092) ENSSGRG00000031090 ENSSGRG00000031089 HTR4 (ENSSGRG00000031088) #10 ENSSGRG00000031086 ENSSGRG00000031084 ENSSGRG00000031083 Common carp reference MODERN SPECIES 20 il4 (ENSCCRG00000052605) ENSCCRG00000071522 ENSCCRG00000064430 msx2a (ENSCCRG00000004546) cpeb4a (ENSCCRG00000073615) stc2a (ENSCCRG00000032679) ENSCCRG00000032673 ENSCCRG00000007360 dpf2l (ENSCCRG00000057318) hnrnpa0a (ENSCCRG00000059572) ENSCCRG00000039094 fam13b (ENSCCRG00000065847) cxcl14 (ENSCCRG00000053197) slit3 (ENSCCRG00000060113) ENSCCRG00000010390 #20 ENSCCRG00000017374 #22 pde6a (ENSCCRG00000005589) tmem216 (ENSCCRG00000005459) ENSCCRG00000062998 ENSCCRG00000062068 ENSCCRG00000057818 #10 ENSCCRG00000069703 #25 ENSCCRG00000038255 thoc3 (ENSCCRG00000038043) cplx2 (ENSCCRG00000069670) slc25a48 (ENSCCRG00000007904) glra1 (ENSCCRG00000073290) g3bp1 (ENSCCRG00000036348) sparc (ENSCCRG00000035673) atox1 (ENSCCRG00000028230) ENSCCRG00000028228 Goldfish MODERN SPECIES 32 tmed9 (ENSCARG00000010459) lman2 (ENSCARG00000010467) gpr137 (ENSCARG00000010502) syvn1 (ENSCARG00000010510) smad5 (ENSCARG00000010559) tgfbi (ENSCARG00000010607) ENSCARG00000010805 ENSCARG00000010874 neurog1 (ENSCARG00000011833) ENSCARG00000011840 ENSCARG00000011843 HS3ST1 (ENSCARG00000011848) ENSCARG00000011860 ENSCARG00000011865 ENSCARG00000011870 ENSCARG00000011875 #22 ENSCARG00000011895 slc25a48 (ENSCARG00000011904) neurog1 (ENSCARG00000011917) polr2g (ENSCARG00000011922) eef1g (ENSCARG00000011947) ENSCARG00000012035 zdhhc9 (ENSCARG00000012053) c1galt1c1 (ENSCARG00000012061) mcts1 (ENSCARG00000012063) cul4b (ENSCARG00000012174) lamp2 (ENSCARG00000014210) septin6 (ENSCARG00000014244) ATP1B4 (ENSCARG00000014931) TMEM255A (ENSCARG00000014959) nkap (ENSCARG00000014986) Cyprininae ANCESTRAL SPECIES 79 ENSGT00950000183033.a.b.b.c ENSGT00390000000618.c ENSGT00940000159322.e ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b.d #22 ENSGT01030000235165.a ENSGT00940000153322.B.d.a.t ENSGT00940000155983.a.a.d #10 ENSGT01100000263544.c.a.a.a.b #25 ENSGT00510000048167.b.b.a ENSGT00940000158129 ENSGT00940000166119 ENSGT00950000182938.b.b.a.e ENSGT00940000159354.a ENSGT00940000159047.d.a ENSGT00390000011365.a.jc ENSGT00510000046787.e.b.j ENSGT00940000163780.s.a ENSGT00940000156583.l ENSGT00940000165176.a Goldfish MODERN SPECIES 5 ENSCARG00000008797 kif3a (ENSCARG00000008420) il4 (ENSCARG00000008385) ENSCARG00000008381 msx2a (ENSCARG00000008376) cpeb4a (ENSCARG00000008113) stc2a (ENSCARG00000008081) nkx2.5 (ENSCARG00000008074) BNIP1 (ENSCARG00000008054) dpf2l (ENSCARG00000008017) hnrnpa0a (ENSCARG00000008003) fam13b (ENSCARG00000007927) CXCL14 (ENSCARG00000007898) slit3 (ENSCARG00000006589) ENSCARG00000006435 #20 ENSCARG00000006385 #22 ENSCARG00000006371 ENSCARG00000006342 ENSCARG00000006303 HTR4 (ENSCARG00000006270) #10 SLC26A2 (ENSCARG00000006251) #25 ENSCARG00000006164 thoc3 (ENSCARG00000006099) cplx2 (ENSCARG00000006070) slc25a48 (ENSCARG00000006051) slc25a48 (ENSCARG00000006045) glra1 (ENSCARG00000005710) g3bp1 (ENSCARG00000005647) sparc (ENSCARG00000005487) atox1 (ENSCARG00000005458) SLC36A1 (ENSCARG00000005412) Cyprininae_a ANCESTRAL SPECIES 104 ENSGT00990000209953.a ENSGT00940000157037.a.d.a ENSGT00940000164716.A.b ENSGT00940000154998.a.b.k.a ENSGT00390000005989.a.b.b.b ENSGT00940000158996.h ENSGT00390000014412.l ENSGT00940000162301 ENSGT00940000155070.a.b.a.b ENSGT00940000154808.a.b.j.a ENSGT00940000157891.a ENSGT00950000183033.a.b.b.c ENSGT00390000000618.c ENSGT00940000159322.e ENSGT00950000183088.a.a.e #20 ENSGT00950000183137.b.b.d #22 ENSGT01030000235165.a ENSGT00940000153322.B.d.a.t ENSGT00940000155983.a.a.d #10 ENSGT01100000263544.c.a.a.a.b #25 ENSGT00510000048167.b.b.a ENSGT00510000048167.b.b.b ENSGT00940000158129 ENSGT00950000182938.b.b.a.f ENSGT00940000159354.b ENSGT00940000159047.d.b ENSGT00390000011365.a.jc ENSGT00510000046787.e.b.j ENSGT00940000163780.s.a ENSGT00940000156583.l ENSGT00940000165176.a Common carp reference MODERN SPECIES 35 kif3a (ENSCCRG00000005867) il4 (ENSCCRG00000062646) ENSCCRG00000060463 msx2a (ENSCCRG00000082142) cpeb4a (ENSCCRG00000071205) stc2a (ENSCCRG00000007402) nkx2.5 (ENSCCRG00000007406) BNIP1 (ENSCCRG00000007411) dpf2l (ENSCCRG00000007368) ENSCCRG00000082153 ENSCCRG00000040735 fam13b (ENSCCRG00000007416) ENSCCRG00000061370 slit3 (ENSCCRG00000062711) ENSCCRG00000010399 #20 ENSCCRG00000010365 #22 ENSCCRG00000010355 ENSCCRG00000005437 ENSCCRG00000050917 #10 ENSCCRG00000059770 #25 ENSCCRG00000075289 ENSCCRG00000075181 cplx2 (ENSCCRG00000075510) slc25a48 (ENSCCRG00000038006) glra1 (ENSCCRG00000036510) g3bp1 (ENSCCRG00000076121) sparc (ENSCCRG00000059331) atox1 (ENSCCRG00000035645) ENSCCRG00000035625 mtnr1al (ENSCCRG00000035616) ENSCCRG00000026071 Golden-line barbel MODERN SPECIES 249 il4 (ENSSGRG00000022741) ENSSGRG00000022739 msx2a (ENSSGRG00000022738) cpeb4a (ENSSGRG00000022676) stc2a (ENSSGRG00000022660) nkx2.5 (ENSSGRG00000022659) BNIP1 (ENSSGRG00000022656) CHRM1 (ENSSGRG00000022655) dpf2l (ENSSGRG00000022654) ENSSGRG00000022653 KLHL3 (ENSSGRG00000022454) fam13b (ENSSGRG00000022297) CXCL14 (ENSSGRG00000022284) slit3 (ENSSGRG00000020690) ENSSGRG00000020649 #20 ENSSGRG00000020647 #22 ENSSGRG00000020645 pde6a (ENSSGRG00000020428) tmem216 (ENSSGRG00000020427) ENSSGRG00000020426 ENSSGRG00000020424 ENSSGRG00000020423 HTR4 (ENSSGRG00000020419) #10 SLC26A2 (ENSSGRG00000020418) #25 ENSSGRG00000020417 thoc3 (ENSSGRG00000020416) cplx2 (ENSSGRG00000020414) cplx2 (ENSSGRG00000020412) slc25a48 (ENSSGRG00000020411) glra1 (ENSSGRG00000020404) g3bp1 (ENSSGRG00000020403) Zebrafish MODERN SPECIES 5 msx2a (ENSDARG00000104651) ENSDARG00000105348 cpeb4a (ENSDARG00000056691) stc2a (ENSDARG00000056680) nkx2.5 (ENSDARG00000018004) BNIP1 (ENSDARG00000078259) CHRM1 (ENSDARG00000037292) dpf2l (ENSDARG00000037291) hnrnpa0a (ENSDARG00000089302) KLHL3 (ENSDARG00000056647) fam13b (ENSDARG00000076779) ENSDARG00000078398 cxcl14 (ENSDARG00000056627) slit3 (ENSDARG00000034268) ENSDARG00000002463 #20 ENSDARG00000101569 #22 pde6a (ENSDARG00000000380) tmem216 (ENSDARG00000091576) ENSDARG00000001162 ENSDARG00000000394 ENSDARG00000099345 HTR4 (ENSDARG00000061940) #10 SLC26A2 (ENSDARG00000011618) #25 ENSDARG00000056519 thoc3 (ENSDARG00000056517) cplx2 (ENSDARG00000061918) slc25a48 (ENSDARG00000021250) glra1 (ENSDARG00000012019) g3bp1 (ENSDARG00000017741) sparc (ENSDARG00000019353) atox1 (ENSDARG00000087693) Osteoglossiformes ANCESTRAL SPECIES 150 ENSGT00940000160487 ENSGT00940000160541 ENSGT00510000046732.B.i ENSGT00510000046732.B.j ENSGT00920000149123.d ENSGT00390000013163 #9 ENSGT00940000153700 #19 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00940000154808.a.b ENSGT00940000157891 ENSGT00950000183033.a.b.b.b ENSGT00390000000618 ENSGT00940000159322 ENSGT00950000183088.a.a #20 ENSGT00950000183137.b.b #22 ENSGT00940000156471.b ENSGT01100000263544.c.a.a.a #25 ENSGT00940000155983.a.a #10 ENSGT00940000158355 ENSGT00940000159747 Asian bonytongue MODERN SPECIES 4 gm2a (ENSSFOG00015002248) hspa9 (ENSSFOG00015002266) fgfrl1b (ENSSFOG00015002361) FBXO38 (ENSSFOG00015002400) #9 csnk1a1 (ENSSFOG00015002502) #19 ENSSFOG00015002569 ENSSFOG00015027544 spdl1 (ENSSFOG00015002583) HNRNPA0 (ENSSFOG00015029213) HNRNPA0 (ENSSFOG00015025597) KLHL3 (ENSSFOG00015002683) FAM13B (ENSSFOG00015002807) cxcl14 (ENSSFOG00015027067) slit3 (ENSSFOG00015002876) ARHGEF37 (ENSSFOG00015003000) #20 ENSSFOG00015024285 #22 pde6a (ENSSFOG00015003096) SLC26A2 (ENSSFOG00015026230) #25 HTR4 (ENSSFOG00015003177) #10 lman2 (ENSSFOG00015003246) tmed9 (ENSSFOG00015003289) b4galt7 (ENSSFOG00015003328) emx3 (ENSSFOG00015003367) FCHSD1 (ENSSFOG00015003395) ENSSFOG00015003471 hdac3 (ENSSFOG00015003477) ENSSFOG00015003533 ENSSFOG00015003576 il1rapl2 (ENSSFOG00015003661) ENSSFOG00015003722 commd5 (ENSSFOG00015003765) P. kingsleyae MODERN SPECIES 50 hspa9 (ENSPKIG00000020567) fgfrl1b (ENSPKIG00000020528) FBXO38 (ENSPKIG00000020462) #9 csnk1a1 (ENSPKIG00000020391) #19 ENSPKIG00000020372 SIL1 (ENSPKIG00000020342) spdl1 (ENSPKIG00000020315) ENSPKIG00000020290 HNRNPA0 (ENSPKIG00000020281) HNRNPA0 (ENSPKIG00000020270) KLHL3 (ENSPKIG00000020218) FAM13B (ENSPKIG00000020108) cxcl14 (ENSPKIG00000020045) slit3 (ENSPKIG00000019877) ARHGEF37 (ENSPKIG00000019789) #20 ENSPKIG00000019743 #22 pde6a (ENSPKIG00000019686) SLC26A2 (ENSPKIG00000019639) #25 HTR4 (ENSPKIG00000019566) #10 lman2 (ENSPKIG00000019510) tmed9 (ENSPKIG00000019481) ENSPKIG00000019447 ndufa1 (ENSPKIG00000019416) rpl39 (ENSPKIG00000019381) upf3b (ENSPKIG00000019226) ENSPKIG00000019178 septin6 (ENSPKIG00000019114) ENSPKIG00000019022 nkrf (ENSPKIG00000019002) slc25a5 (ENSPKIG00000018987) slc25a43 (ENSPKIG00000018978) Spotted gar MODERN SPECIES 672 PRR7 (ENSLOCG00000012327) DBN1 (ENSLOCG00000012321) ENSLOCG00000012316 ENSLOCG00000012311 znf346 (ENSLOCG00000012305) fgfr4 (ENSLOCG00000012293) ENSLOCG00000012289 ENSLOCG00000012285 ENSLOCG00000012281 rab24 (ENSLOCG00000012274) fam13b (ENSLOCG00000012259) cxcl14 (ENSLOCG00000012251) slit3 (ENSLOCG00000012214) tlr22 (ENSLOCG00000018316) ARHGEF37 (ENSLOCG00000012204) #20 ENSLOCG00000012195 #22 pde6a (ENSLOCG00000012187) SLC26A2 (ENSLOCG00000012182) #25 HTR4 (ENSLOCG00000012176) #10 lman2 (ENSLOCG00000012170) tmed9 (ENSLOCG00000012165) b4galt7 (ENSLOCG00000012160) emx3 (ENSLOCG00000012156) N4BP3 (ENSLOCG00000012151) rmnd5b (ENSLOCG00000012143) KLHL3 (ENSLOCG00000012130) ENSLOCG00000012121 spdl1 (ENSLOCG00000012111) SIL1 (ENSLOCG00000012109) csnk1a1 (ENSLOCG00000012101) #19 FBXO38 (ENSLOCG00000012089) #9 Reedfish MODERN SPECIES 2 GEMIN5 (ENSECRG00000009202) mrpl22 (ENSECRG00000009188) sgcd (ENSECRG00000009179) ENSECRG00000009132 rars1 (ENSECRG00000009109) ENSECRG00000011037 ENSECRG00000011026 nop16 (ENSECRG00000011020) ENSECRG00000011015 ENSECRG00000011013 GRK6 (ENSECRG00000011004) ENSECRG00000010995 DBN1 (ENSECRG00000010977) zgc:77151 (ENSECRG00000010966) ARHGEF37 (ENSECRG00000010956) #20 PPARGC1B (ENSECRG00000010948) #22 PDE6A (ENSECRG00000010059) #23 SLC26A2 (ENSECRG00000009870) #25 HTR4 (ENSECRG00000009860) #10 lman2 (ENSECRG00000009839) tmed9 (ENSECRG00000009714) b4galt7 (ENSECRG00000009680) ENSECRG00000009670 emx3 (ENSECRG00000009661) N4BP3 (ENSECRG00000009649) rmnd5b (ENSECRG00000009617) rab24 (ENSECRG00000009598) ENSECRG00000009557 fgfr4 (ENSECRG00000009520) znf346 (ENSECRG00000009498) ENSECRG00000009454 Elephant shark MODERN SPECIES 1641 ENSCMIG00000000638 faf2 (ENSCMIG00000019755) CLTB (ENSCMIG00000019753) higd2a (ENSCMIG00000019751) nop16 (ENSCMIG00000019750) ENSCMIG00000019748 KIAA1191 (ENSCMIG00000019747) ENSCMIG00000019745 thoc3 (ENSCMIG00000019741) cplx2 (ENSCMIG00000019739) FBXO38 (ENSCMIG00000019727) #9 csnk1a1 (ENSCMIG00000019696) #19 tlr22 (ENSCMIG00000019690) ENSCMIG00000019686 #20 ENSCMIG00000019685 ENSCMIG00000019684 #22 ENSCMIG00000019680 pde6a (ENSCMIG00000019459) Gnathostomata ANCESTRAL SPECIES 9 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000013015 ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b Euteleostomi ANCESTRAL SPECIES ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00940000177623 ENSGT00980000201267 ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Sarcopterygii ANCESTRAL SPECIES 2 ENSGT00940000157221 ENSGT00390000000214.a.b ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Tetrapoda ANCESTRAL SPECIES 3 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00940000177623 ENSGT00980000201267 ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Amniota ANCESTRAL SPECIES 2 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00940000177623 ENSGT00980000201267 ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Mammalia ANCESTRAL SPECIES 1 ENSGT00390000015965 ENSGT00940000174987 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Theria ANCESTRAL SPECIES 6 ENSGT00390000015965 ENSGT00940000174987 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Marsupialia ANCESTRAL SPECIES 7 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b.r ENSGT00950000183177.a.a.b.q ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b Marsupialia_b ANCESTRAL SPECIES 8 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b.r ENSGT00950000183177.a.a.b.q ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b Diprotodontia ANCESTRAL SPECIES 10 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398.a ENSGT00940000159983 ENSGT00950000183177.a.a.b.q ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b Diprotodontia_a ANCESTRAL SPECIES 12 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398.a ENSGT00940000159983 ENSGT00950000183177.a.a.b.q ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b koala MODERN SPECIES 2 STIM2 (ENSPCIG00000034168) TBC1D19 (ENSPCIG00000031776) CCKAR (ENSPCIG00000020497) RBPJ (ENSPCIG00000020491) ENSPCIG00000020488 SEL1L3 (ENSPCIG00000020485) SLC34A2 (ENSPCIG00000010248) ANAPC4 (ENSPCIG00000004096) ZCCHC4 (ENSPCIG00000004082) PI4K2B (ENSPCIG00000004075) SEPSECS (ENSPCIG00000004071) LGI2 (ENSPCIG00000004064) CCDC149 (ENSPCIG00000004052) SOD3 (ENSPCIG00000004032) DHX15 (ENSPCIG00000004023) PPARGC1A (ENSPCIG00000015835) ##22 GBA3 (ENSPCIG00000031948) ADGRA3 (ENSPCIG00000003169) KCNIP4 (ENSPCIG00000032533) PACRGL (ENSPCIG00000001570) SLIT2 (ENSPCIG00000001602) ENSPCIG00000033287 #36 LCORL (ENSPCIG00000002185) NCAPG (ENSPCIG00000002094) FAM184B (ENSPCIG00000002043) MED28 (ENSPCIG00000002020) LAP3 (ENSPCIG00000001974) ENSPCIG00000001957 CLRN2 (ENSPCIG00000034320) QDPR (ENSPCIG00000036849) LDB2 (ENSPCIG00000018570) Common wonbat MODERN SPECIES 1054 ENSVURG00010005042 SEL1L3 (ENSVURG00010005010) ENSVURG00010005005 ENSVURG00010004876 ENSVURG00010004770 ENSVURG00010004760 ENSVURG00010004753 ANAPC4 (ENSVURG00010004724) ZCCHC4 (ENSVURG00010004655) PI4K2B (ENSVURG00010004516) SEPSECS (ENSVURG00010004502) LGI2 (ENSVURG00010004467) CCDC149 (ENSVURG00010004454) ENSVURG00010004425 DHX15 (ENSVURG00010004378) PPARGC1A (ENSVURG00010004128) ##22 GBA3 (ENSVURG00010003981) ADGRA3 (ENSVURG00010003909) KCNIP4 (ENSVURG00010003721) PACRGL (ENSVURG00010003638) SLIT2 (ENSVURG00010003053) ENSVURG00010002861 LCORL (ENSVURG00010002792) NCAPG (ENSVURG00010002704) FAM184B (ENSVURG00010002687) MED28 (ENSVURG00010002668) LAP3 (ENSVURG00010002623) CLRN2 (ENSVURG00010002616) QDPR (ENSVURG00010002603) LDB2 (ENSVURG00010002542) TAPT1 (ENSVURG00010001958) Wallaby MODERN SPECIES 1882 PPARGC1A (ENSMEUG00000006008) ##22 Tasmanian devil MODERN SPECIES 5 SEL1L3 (ENSSHAG00000009419) ENSSHAG00000023004 ENSSHAG00000028205 ENSSHAG00000031795 ENSSHAG00000010890 ENSSHAG00000004649 ENSSHAG00000010251 ANAPC4 (ENSSHAG00000003402) ZCCHC4 (ENSSHAG00000004438) PI4K2B (ENSSHAG00000031409) SEPSECS (ENSSHAG00000007001) LGI2 (ENSSHAG00000031544) CCDC149 (ENSSHAG00000022022) SOD3 (ENSSHAG00000010341) DHX15 (ENSSHAG00000011568) PPARGC1A (ENSSHAG00000010033) ##22 GBA3 (ENSSHAG00000014922) ADGRA3 (ENSSHAG00000015732) KCNIP4 (ENSSHAG00000018003) PACRGL (ENSSHAG00000018246) SLIT2 (ENSSHAG00000018310) LCORL (ENSSHAG00000022282) NCAPG (ENSSHAG00000016051) FAM184B (ENSSHAG00000030198) MED28 (ENSSHAG00000021089) LAP3 (ENSSHAG00000016352) CLRN2 (ENSSHAG00000020791) QDPR (ENSSHAG00000020885) LDB2 (ENSSHAG00000017644) TAPT1 (ENSSHAG00000026955) PROM1 (ENSSHAG00000018318) Opossum MODERN SPECIES 4 ENSMODG00000025549 ENSMODG00000027534 ENSMODG00000025532 ENSMODG00000041870 ENSMODG00000000304 ENSMODG00000049518 ENSMODG00000000328 ENSMODG00000000363 ZCCHC4 (ENSMODG00000000388) PI4K2B (ENSMODG00000000405) SEPSECS (ENSMODG00000000423) LGI2 (ENSMODG00000000460) CCDC149 (ENSMODG00000000471) ENSMODG00000000474 DHX15 (ENSMODG00000000516) PPARGC1A (ENSMODG00000000549) ##22 ENSMODG00000027716 ENSMODG00000051423 GBA3 (ENSMODG00000000560) ADGRA3 (ENSMODG00000000582) ENSMODG00000024777 ENSMODG00000029251 ENSMODG00000042215 ENSMODG00000000625 PACRGL (ENSMODG00000000641) SLIT2 (ENSMODG00000000731) ENSMODG00000050739 ENSMODG00000000757 NCAPG (ENSMODG00000000781) FAM184B (ENSMODG00000000804) MED28 (ENSMODG00000000813) Eutheria ANCESTRAL SPECIES 2 ENSGT00390000015965 ENSGT00940000174987 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 Boreoeutheria ANCESTRAL SPECIES 8 ENSGT00940000174987 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00990000204159 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b Laurasiatheria ANCESTRAL SPECIES 11 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00990000204159 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b Laurasiatheria_a ANCESTRAL SPECIES 8 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT01010000227024 ENSGT00390000012430 ENSGT00990000204159 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B Artiodactyla ANCESTRAL SPECIES 12 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT01010000227024 ENSGT00390000012430 ENSGT00990000204159 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 Suina ANCESTRAL SPECIES 33 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00940000155145.qb ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT01010000227024 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Chacoan peccary MODERN SPECIES 960 CCKAR (ENSCWAG00000013281) RBPJ (ENSCWAG00000012916) SMIM20 (ENSCWAG00000012836) SEL1L3 (ENSCWAG00000012543) SLC34A2 (ENSCWAG00000012428) ENSCWAG00000012413 ANAPC4 (ENSCWAG00000012255) ZCCHC4 (ENSCWAG00000012130) PI4K2B (ENSCWAG00000011991) SEPSECS (ENSCWAG00000011958) LGI2 (ENSCWAG00000011876) CCDC149 (ENSCWAG00000021648) SOD3 (ENSCWAG00000021634) DHX15 (ENSCWAG00000021627) ENSCWAG00000021624 PPARGC1A (ENSCWAG00000021590) ##22 GBA3 (ENSCWAG00000021575) ADGRA3 (ENSCWAG00000021565) KCNIP4 (ENSCWAG00000021434) PACRGL (ENSCWAG00000021407) SLIT2 (ENSCWAG00000021168) LCORL (ENSCWAG00000021051) NCAPG (ENSCWAG00000021025) ENSCWAG00000021017 DCAF16 (ENSCWAG00000021010) FAM184B (ENSCWAG00000020994) MED28 (ENSCWAG00000020976) LAP3 (ENSCWAG00000020960) CLRN2 (ENSCWAG00000020951) QDPR (ENSCWAG00000020915) LDB2 (ENSCWAG00000020873) Pig MODERN SPECIES 16 CCKAR (ENSSSCG00000061661) RBPJ (ENSSSCG00000022155) ENSSSCG00000040571 SEL1L3 (ENSSSCG00000022446) SLC34A2 (ENSSSCG00000008758) ENSSSCG00000028632 ANAPC4 (ENSSSCG00000025902) ZCCHC4 (ENSSSCG00000028581) PI4K2B (ENSSSCG00000027340) SEPSECS (ENSSSCG00000025315) LGI2 (ENSSSCG00000028927) CCDC149 (ENSSSCG00000023001) SOD3 (ENSSSCG00000028814) DHX15 (ENSSSCG00000008756) ENSSSCG00000048996 PPARGC1A (ENSSSCG00000029275) ##22 GBA3 (ENSSSCG00000008754) ADGRA3 (ENSSSCG00000008753) KCNIP4 (ENSSSCG00000023934) PACRGL (ENSSSCG00000008750) SLIT2 (ENSSSCG00000008749) ENSSSCG00000045672 LCORL (ENSSSCG00000008748) NCAPG (ENSSSCG00000008747) DCAF16 (ENSSSCG00000040393) FAM184B (ENSSSCG00000026232) MED28 (ENSSSCG00000029989) LAP3 (ENSSSCG00000023604) CLRN2 (ENSSSCG00000023941) QDPR (ENSSSCG00000034811) LDB2 (ENSSSCG00000029227) Artiodactyla_a ANCESTRAL SPECIES 12 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT00990000204159 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Camelidae ANCESTRAL SPECIES 22 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Arabian camel MODERN SPECIES 11 STIM2 (ENSCDRG00005011898) TBC1D19 (ENSCDRG00005012784) CCKAR (ENSCDRG00005013202) RBPJ (ENSCDRG00005013306) SMIM20 (ENSCDRG00005014579) SEL1L3 (ENSCDRG00005014618) SLC34A2 (ENSCDRG00005014773) ANAPC4 (ENSCDRG00005014928) ZCCHC4 (ENSCDRG00005015096) PI4K2B (ENSCDRG00005015238) SEPSECS (ENSCDRG00005015323) LGI2 (ENSCDRG00005015363) CCDC149 (ENSCDRG00005015468) DHX15 (ENSCDRG00005015802) ENSCDRG00005015845 PPARGC1A (ENSCDRG00005015905) ##22 GBA3 (ENSCDRG00005016157) ADGRA3 (ENSCDRG00005016284) KCNIP4 (ENSCDRG00005017078) PACRGL (ENSCDRG00005017336) SLIT2 (ENSCDRG00005017665) LCORL (ENSCDRG00005019406) NCAPG (ENSCDRG00005019491) DCAF16 (ENSCDRG00005019512) ENSCDRG00005019521 FAM184B (ENSCDRG00005019524) MED28 (ENSCDRG00005019543) LAP3 (ENSCDRG00005019557) CLRN2 (ENSCDRG00005019615) QDPR (ENSCDRG00005019647) LDB2 (ENSCDRG00005019698) Alpaca MODERN SPECIES 2139 PPARGC1A (ENSVPAG00000003478) ##22 GBA3 (ENSVPAG00000003477) Artiodactyla_b ANCESTRAL SPECIES 16 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430.b ENSGT00990000204159 ENSGT00390000012430.a.a ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 Pecora ANCESTRAL SPECIES 15 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398.f ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430.b ENSGT00990000204159 ENSGT00390000012430.a.a ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00390000002485 ENSGT00390000010702 Percora_a ANCESTRAL SPECIES 18 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398.f ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430.b ENSGT00990000204159 ENSGT00390000012430.a.a ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00390000002485 ENSGT00390000010702 Bovidae ANCESTRAL SPECIES 18 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398.f ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430.b ENSGT00990000204159 ENSGT00390000012430.a.a ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00390000002485 ENSGT00390000010702 Caprinae ANCESTRAL SPECIES 13 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398.e.b ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00990000204159 ENSGT00390000012430.b ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00390000002485 ENSGT00390000010702 ENSGT00390000002509 Goat MODERN SPECIES 25 TBC1D19 (ENSCHIG00000015018) CCKAR (ENSCHIG00000024465) RBPJ (ENSCHIG00000022041) ENSCHIG00000026046 ENSCHIG00000016018 SEL1L3 (ENSCHIG00000020813) SLC34A2 (ENSCHIG00000015739) ANAPC4 (ENSCHIG00000023609) ZCCHC4 (ENSCHIG00000022645) PI4K2B (ENSCHIG00000022484) SEPSECS (ENSCHIG00000010810) LGI2 (ENSCHIG00000022089) CCDC149 (ENSCHIG00000015517) SOD3 (ENSCHIG00000017899) DHX15 (ENSCHIG00000026321) PPARGC1A (ENSCHIG00000015991) ##22 GBA3 (ENSCHIG00000011472) ADGRA3 (ENSCHIG00000019880) KCNIP4 (ENSCHIG00000026213) PACRGL (ENSCHIG00000003767) SLIT2 (ENSCHIG00000026290) ENSCHIG00000025245 ENSCHIG00000014191 LCORL (ENSCHIG00000019851) NCAPG (ENSCHIG00000012343) ENSCHIG00000004370 DCAF16 (ENSCHIG00000018352) FAM184B (ENSCHIG00000018090) MED28 (ENSCHIG00000026033) LAP3 (ENSCHIG00000007898) ENSCHIG00000016386 Rambouillet Sheep MODERN SPECIES 22 CCKAR (ENSOARG00020019878) RBPJ (ENSOARG00020019203) ENSOARG00020019119 ENSOARG00020019074 SEL1L3 (ENSOARG00020017417) SLC34A2 (ENSOARG00020017154) ENSOARG00020017059 ANAPC4 (ENSOARG00020016174) ZCCHC4 (ENSOARG00020016087) PI4K2B (ENSOARG00020015990) SEPSECS (ENSOARG00020015918) LGI2 (ENSOARG00020015826) CCDC149 (ENSOARG00020015431) SOD3 (ENSOARG00020015395) DHX15 (ENSOARG00020015199) PPARGC1A (ENSOARG00020014504) ##22 GBA3 (ENSOARG00020014356) ENSOARG00020014326 ADGRA3 (ENSOARG00020012646) KCNIP4 (ENSOARG00020010623) PACRGL (ENSOARG00020009882) SLIT2 (ENSOARG00020024781) LCORL (ENSOARG00020024486) NCAPG (ENSOARG00020024287) ENSOARG00020024265 DCAF16 (ENSOARG00020024261) FAM184B (ENSOARG00020024233) MED28 (ENSOARG00020024224) LAP3 (ENSOARG00020024149) IBSP (ENSOARG00020024136) ENSOARG00020024122 Bovinae ANCESTRAL SPECIES 15 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398.f.b.b ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430.b ENSGT00990000204159 ENSGT00390000012430.a.a ENSGT00530000063669.a ENSGT00390000006192.mb ENSGT00530000063255.B ENSGT00390000002485 ENSGT00390000010702 Bos ANCESTRAL SPECIES 15 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398.f.b.b ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430.b ENSGT00990000204159 ENSGT00390000012430.a.a ENSGT00530000063669.a ENSGT00390000006192.mb ENSGT00530000063255.B ENSGT00390000002485 ENSGT00390000010702 Bos_a ANCESTRAL SPECIES 33 ENSGT00390000002398.f.a ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430.b ENSGT00990000204159 ENSGT00530000063669.a ENSGT00390000006192.mb ENSGT00530000063255.B ENSGT00390000002485 ENSGT00390000010702 ENSGT00390000002509 Domestic yak MODERN SPECIES 25 TBC1D19 (ENSBGRG00000010907) CCKAR (ENSBGRG00000011346) ENSBGRG00000011453 ENSBGRG00000011943 SEL1L3 (ENSBGRG00000012074) SLC34A2 (ENSBGRG00000012616) ANAPC4 (ENSBGRG00000012791) ZCCHC4 (ENSBGRG00000013290) PI4K2B (ENSBGRG00000013424) ENSBGRG00000013553 ENSBGRG00000013588 LGI2 (ENSBGRG00000013655) CCDC149 (ENSBGRG00000013831) SOD3 (ENSBGRG00000014092) DHX15 (ENSBGRG00000014165) PPARGC1A (ENSBGRG00000014262) ##22 ENSBGRG00000014626 GBA3 (ENSBGRG00000014640) ADGRA3 (ENSBGRG00000014715) KCNIP4 (ENSBGRG00000015106) ENSBGRG00000016237 PACRGL (ENSBGRG00000016270) SLIT2 (ENSBGRG00000016692) LCORL (ENSBGRG00000018966) NCAPG (ENSBGRG00000019203) DCAF16 (ENSBGRG00000019480) ENSBGRG00000019505 FAM184B (ENSBGRG00000019554) ENSBGRG00000020045 LAP3 (ENSBGRG00000020079) IBSP (ENSBGRG00000020277) Wild yak MODERN SPECIES 883 CCKAR (ENSBMUG00000009499) ENSBMUG00000009400 ENSBMUG00000009243 SEL1L3 (ENSBMUG00000009222) SLC34A2 (ENSBMUG00000009192) ANAPC4 (ENSBMUG00000009147) ZCCHC4 (ENSBMUG00000009112) PI4K2B (ENSBMUG00000009097) ENSBMUG00000009090 ENSBMUG00000009078 LGI2 (ENSBMUG00000009065) CCDC149 (ENSBMUG00000009015) SOD3 (ENSBMUG00000008945) DHX15 (ENSBMUG00000008926) PPARGC1A (ENSBMUG00000008896) ##22 GBA3 (ENSBMUG00000008806) ADGRA3 (ENSBMUG00000008551) KCNIP4 (ENSBMUG00000008314) PACRGL (ENSBMUG00000008109) SLIT2 (ENSBMUG00000007699) ENSBMUG00000007576 LCORL (ENSBMUG00000007513) DCAF16 (ENSBMUG00000007469) NCAPG (ENSBMUG00000007457) Bos_b ANCESTRAL SPECIES 14 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398.f.b.b ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430.a.a ENSGT00990000204159 ENSGT00390000012430.b ENSGT00530000063669.a ENSGT00390000006192.mb ENSGT00530000063255.B ENSGT00390000002485 ENSGT00390000010702 Hybrid Bos Indicus MODERN SPECIES 25 TBC1D19 (ENSBIXG00005014867) CCKAR (ENSBIXG00005014904) ENSBIXG00005014915 ENSBIXG00005015160 ENSBIXG00005015232 SEL1L3 (ENSBIXG00005015302) SLC34A2 (ENSBIXG00005015405) ANAPC4 (ENSBIXG00005015494) ZCCHC4 (ENSBIXG00005015528) PI4K2B (ENSBIXG00005007139) SEPSECS (ENSBIXG00005015627) LGI2 (ENSBIXG00005015662) CCDC149 (ENSBIXG00005015720) SOD3 (ENSBIXG00005015766) DHX15 (ENSBIXG00005000158) PPARGC1A (ENSBIXG00005002513) ##22 GBA3 (ENSBIXG00005002538) ADGRA3 (ENSBIXG00005016078) KCNIP4 (ENSBIXG00005016282) PACRGL (ENSBIXG00005016395) SLIT2 (ENSBIXG00005016517) LCORL (ENSBIXG00005016615) NCAPG (ENSBIXG00005016643) ENSBIXG00005016657 DCAF16 (ENSBIXG00005016667) FAM184B (ENSBIXG00005016686) MED28 (ENSBIXG00005016711) LAP3 (ENSBIXG00005002708) IBSP (ENSBIXG00005002715) MEPE (ENSBIXG00005016833) SPP1 (ENSBIXG00005002733) Cow MODERN SPECIES 25 TBC1D19 (ENSBTAG00000033214) CCKAR (ENSBTAG00000004988) RBPJ (ENSBTAG00000003602) SMIM20 (ENSBTAG00000003897) SEL1L3 (ENSBTAG00000002299) SLC34A2 (ENSBTAG00000001545) ANAPC4 (ENSBTAG00000000646) ZCCHC4 (ENSBTAG00000007240) PI4K2B (ENSBTAG00000006492) SEPSECS (ENSBTAG00000014616) LGI2 (ENSBTAG00000017390) CCDC149 (ENSBTAG00000021940) SOD3 (ENSBTAG00000013980) DHX15 (ENSBTAG00000008896) ENSBTAG00000050251 PPARGC1A (ENSBTAG00000017024) ##22 ENSBTAG00000033327 ENSBTAG00000054175 GBA3 (ENSBTAG00000020363) ADGRA3 (ENSBTAG00000004653) KCNIP4 (ENSBTAG00000047743) PACRGL (ENSBTAG00000033351) SLIT2 (ENSBTAG00000005108) LCORL (ENSBTAG00000046561) DCAF16 (ENSBTAG00000011973) NCAPG (ENSBTAG00000021582) FAM184B (ENSBTAG00000005932) MED28 (ENSBTAG00000019441) LAP3 (ENSBTAG00000005989) IBSP (ENSBTAG00000000470) MEPE (ENSBTAG00000007568) American bison MODERN SPECIES 3060 STIM2 (ENSBBBG00000000908) TBC1D19 (ENSBBBG00000000826) CCKAR (ENSBBBG00000000817) ENSBBBG00000014989 ENSBBBG00000015008 SEL1L3 (ENSBBBG00000015090) SLC34A2 (ENSBBBG00000015150) ANAPC4 (ENSBBBG00000003767) ZCCHC4 (ENSBBBG00000003522) PI4K2B (ENSBBBG00000015277) SEPSECS (ENSBBBG00000015291) LGI2 (ENSBBBG00000015299) CCDC149 (ENSBBBG00000001370) SOD3 (ENSBBBG00000001360) DHX15 (ENSBBBG00000001321) PPARGC1A (ENSBBBG00000003508) ##22 GBA3 (ENSBBBG00000015331) ADGRA3 (ENSBBBG00000015349) Siberian musk deer MODERN SPECIES 1269 CCKAR (ENSMMSG00000013523) RBPJ (ENSMMSG00000013568) ENSMMSG00000013732 ENSMMSG00000013746 SEL1L3 (ENSMMSG00000013767) SLC34A2 (ENSMMSG00000013857) ENSMMSG00000013917 ANAPC4 (ENSMMSG00000013938) ENSMMSG00000013962 PI4K2B (ENSMMSG00000013983) SEPSECS (ENSMMSG00000014034) LGI2 (ENSMMSG00000014063) CCDC149 (ENSMMSG00000014088) SOD3 (ENSMMSG00000014159) DHX15 (ENSMMSG00000014182) PPARGC1A (ENSMMSG00000014222) ##22 GBA3 (ENSMMSG00000014264) ADGRA3 (ENSMMSG00000014314) ENSMMSG00000014413 KCNIP4 (ENSMMSG00000014468) PACRGL (ENSMMSG00000015388) SLIT2 (ENSMMSG00000015533) Yarkand deer MODERN SPECIES 8 ENSCHYG00000009099 TBC1D19 (ENSCHYG00000008635) CCKAR (ENSCHYG00000008569) RBPJ (ENSCHYG00000008084) ENSCHYG00000008030 ENSCHYG00000008010 SEL1L3 (ENSCHYG00000007618) ANAPC4 (ENSCHYG00000007432) ZCCHC4 (ENSCHYG00000007309) PI4K2B (ENSCHYG00000007192) SEPSECS (ENSCHYG00000007094) LGI2 (ENSCHYG00000007044) CCDC149 (ENSCHYG00000006926) SOD3 (ENSCHYG00000006891) DHX15 (ENSCHYG00000021793) PPARGC1A (ENSCHYG00000021428) ##22 GBA3 (ENSCHYG00000021332) ADGRA3 (ENSCHYG00000021204) KCNIP4 (ENSCHYG00000020826) PACRGL (ENSCHYG00000020362) SLIT2 (ENSCHYG00000017605) LCORL (ENSCHYG00000017174) NCAPG (ENSCHYG00000016981) ENSCHYG00000016911 DCAF16 (ENSCHYG00000016863) FAM184B (ENSCHYG00000016331) MED28 (ENSCHYG00000016257) LAP3 (ENSCHYG00000016057) ENSCHYG00000015978 IBSP (ENSCHYG00000015873) MEPE (ENSCHYG00000015726) Cetacea ANCESTRAL SPECIES 12 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398.d ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000155046.ib ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430.b ENSGT00990000204159 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT01030000234638.b.a.b.q.a Odontoceti ANCESTRAL SPECIES 11 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.z ENSGT00390000002398.d ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000155046.ib ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430.b ENSGT00990000204159 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT01030000234638.b.a.b.q.a Odontoceti_a ANCESTRAL SPECIES 22 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430.a.b ENSGT00990000204159 ENSGT00390000012430.b ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b Dolphin MODERN SPECIES 4177 PPARGC1A (ENSTTRG00000005327) ##22 Odontoceti_b ANCESTRAL SPECIES 11 ENSGT01100000263563.c.b ENSGT00390000005197.a.z ENSGT00390000002398.d ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000005197.a.y.a ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430.a.b ENSGT00990000204159 ENSGT00390000012430.b ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 Monodontidae ANCESTRAL SPECIES 9 ENSGT01100000263563.c.b ENSGT00390000005197.a.z ENSGT00390000002398.d ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000005197.a.y.a ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000155046.ib ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430.a.b ENSGT00990000204159 ENSGT00390000012430.b ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B Narwhal MODERN SPECIES 307 TBC1D19 (ENSMMNG00015008369) CCKAR (ENSMMNG00015008421) ENSMMNG00015008477 ENSMMNG00015008545 SEL1L3 (ENSMMNG00015008572) SLC34A2 (ENSMMNG00015008603) ENSMMNG00015008616 ANAPC4 (ENSMMNG00015008631) ZCCHC4 (ENSMMNG00015008659) PI4K2B (ENSMMNG00015008695) SEPSECS (ENSMMNG00015008713) LGI2 (ENSMMNG00015008731) CCDC149 (ENSMMNG00015008754) DHX15 (ENSMMNG00015008799) ENSMMNG00015008809 PPARGC1A (ENSMMNG00015008833) ##22 ENSMMNG00015008863 ADGRA3 (ENSMMNG00015008884) KCNIP4 (ENSMMNG00015008956) PACRGL (ENSMMNG00015009050) SLIT2 (ENSMMNG00015009152) ENSMMNG00015009273 ENSMMNG00015009280 LCORL (ENSMMNG00015009296) NCAPG (ENSMMNG00015007354) DCAF16 (ENSMMNG00015007397) FAM184B (ENSMMNG00015007424) MED28 (ENSMMNG00015007473) LAP3 (ENSMMNG00015007496) CLRN2 (ENSMMNG00015007529) QDPR (ENSMMNG00015007572) Beluga whale MODERN SPECIES 77 TBC1D19 (ENSDLEG00000013283) CCKAR (ENSDLEG00000013378) RBPJ (ENSDLEG00000013407) SMIM20 (ENSDLEG00000013675) SEL1L3 (ENSDLEG00000013692) SLC34A2 (ENSDLEG00000013774) ANAPC4 (ENSDLEG00000013885) ZCCHC4 (ENSDLEG00000013994) PI4K2B (ENSDLEG00000014029) SEPSECS (ENSDLEG00000014056) LGI2 (ENSDLEG00000014089) CCDC149 (ENSDLEG00000014195) SOD3 (ENSDLEG00000014224) DHX15 (ENSDLEG00000014245) ENSDLEG00000014273 PPARGC1A (ENSDLEG00000014290) ##22 ADGRA3 (ENSDLEG00000014341) KCNIP4 (ENSDLEG00000014391) PACRGL (ENSDLEG00000014457) SLIT2 (ENSDLEG00000014508) ENSDLEG00000014713 ENSDLEG00000014730 PITPNA (ENSDLEG00000014743) LCORL (ENSDLEG00000014752) LCORL (ENSDLEG00000014767) NCAPG (ENSDLEG00000014792) ENSDLEG00000015016 ENSDLEG00000015021 FAM184B (ENSDLEG00000015028) MED28 (ENSDLEG00000015066) LAP3 (ENSDLEG00000015076) Vaquita MODERN SPECIES 16 ENSPSNG00000021513 SMIM20 (ENSPSNG00000021406) SEL1L3 (ENSPSNG00000021270) SLC34A2 (ENSPSNG00000021188) ENSPSNG00000021159 ANAPC4 (ENSPSNG00000021117) ZCCHC4 (ENSPSNG00000021077) PI4K2B (ENSPSNG00000021008) SEPSECS (ENSPSNG00000020956) LGI2 (ENSPSNG00000020909) CCDC149 (ENSPSNG00000020784) SOD3 (ENSPSNG00000020739) DHX15 (ENSPSNG00000020699) ENSPSNG00000020677 ENSPSNG00000020646 PPARGC1A (ENSPSNG00000020569) ##22 ADGRA3 (ENSPSNG00000020337) KCNIP4 (ENSPSNG00000019756) PACRGL (ENSPSNG00000019499) SLIT2 (ENSPSNG00000017795) ENSPSNG00000017595 LCORL (ENSPSNG00000017486) NCAPG (ENSPSNG00000017383) DCAF16 (ENSPSNG00000017358) FAM184B (ENSPSNG00000017332) MED28 (ENSPSNG00000017283) ENSPSNG00000017095 CLRN2 (ENSPSNG00000017033) QDPR (ENSPSNG00000016877) LDB2 (ENSPSNG00000016774) TAPT1 (ENSPSNG00000015826) Sperm whale MODERN SPECIES 18 ENSPCTG00005009237 TBC1D19 (ENSPCTG00005009308) CCKAR (ENSPCTG00005009612) ENSPCTG00005009702 ENSPCTG00005010143 SEL1L3 (ENSPCTG00005010228) ENSPCTG00005010721 ANAPC4 (ENSPCTG00005010830) ZCCHC4 (ENSPCTG00005010952) PI4K2B (ENSPCTG00005011034) SEPSECS (ENSPCTG00005011169) LGI2 (ENSPCTG00005011194) CCDC149 (ENSPCTG00005011289) SOD3 (ENSPCTG00005011496) DHX15 (ENSPCTG00005011521) PPARGC1A (ENSPCTG00005011631) ##22 ENSPCTG00005011760 ADGRA3 (ENSPCTG00005011845) KCNIP4 (ENSPCTG00005012048) PACRGL (ENSPCTG00005012723) SLIT2 (ENSPCTG00005013113) ENSPCTG00005015108 LCORL (ENSPCTG00005015166) NCAPG (ENSPCTG00005015312) DCAF16 (ENSPCTG00005015428) ENSPCTG00005015449 FAM184B (ENSPCTG00005015473) MED28 (ENSPCTG00005015699) LAP3 (ENSPCTG00005015721) ENSPCTG00005015805 CLRN2 (ENSPCTG00005015878) Blue whale MODERN SPECIES 16 STIM2 (ENSBMSG00010000991) ENSBMSG00010001022 TBC1D19 (ENSBMSG00010001070) CCKAR (ENSBMSG00010001131) ENSBMSG00010001239 SMIM20 (ENSBMSG00010001389) SEL1L3 (ENSBMSG00010001472) SLC34A2 (ENSBMSG00010001530) ANAPC4 (ENSBMSG00010001569) ZCCHC4 (ENSBMSG00010001603) PI4K2B (ENSBMSG00010001625) SEPSECS (ENSBMSG00010001650) LGI2 (ENSBMSG00010001673) CCDC149 (ENSBMSG00010001719) DHX15 (ENSBMSG00010001763) PPARGC1A (ENSBMSG00010001849) ##22 ENSBMSG00010001976 ADGRA3 (ENSBMSG00010002059) KCNIP4 (ENSBMSG00010002394) ENSBMSG00010002859 PACRGL (ENSBMSG00010002900) SLIT2 (ENSBMSG00010003178) ENSBMSG00010003522 LCORL (ENSBMSG00010003554) NCAPG (ENSBMSG00010003593) DCAF16 (ENSBMSG00010003609) FAM184B (ENSBMSG00010003615) ENSBMSG00010003627 LAP3 (ENSBMSG00010003642) ENSBMSG00010003653 CLRN2 (ENSBMSG00010003668) Laurasiatheria_b ANCESTRAL SPECIES 8 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00990000204159 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Carnivora ANCESTRAL SPECIES 5 ENSGT00970000193677 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00990000204159 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Caniformia ANCESTRAL SPECIES 7 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00990000204159 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Caniformia_b ANCESTRAL SPECIES 5 ENSGT00970000193677 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00990000204159 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Ursidae ANCESTRAL SPECIES 29 ENSGT00390000015965 ENSGT00950000182895.a.a.a.a.a.a.b.a.a.c.b ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00990000204159 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Ursus ANCESTRAL SPECIES 180 ENSGT00970000193677 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 Polar bear MODERN SPECIES 128 TBC1D19 (ENSUMAG00000004209) ENSUMAG00000004204 CCKAR (ENSUMAG00000004192) RBPJ (ENSUMAG00000004171) SMIM20 (ENSUMAG00000004164) SEL1L3 (ENSUMAG00000003892) SLC34A2 (ENSUMAG00000003792) ANAPC4 (ENSUMAG00000003767) ZCCHC4 (ENSUMAG00000003758) PI4K2B (ENSUMAG00000003697) SEPSECS (ENSUMAG00000003690) LGI2 (ENSUMAG00000003678) CCDC149 (ENSUMAG00000003673) ENSUMAG00000003656 DHX15 (ENSUMAG00000003647) PPARGC1A (ENSUMAG00000003557) ##22 GBA3 (ENSUMAG00000003537) ADGRA3 (ENSUMAG00000003527) KCNIP4 (ENSUMAG00000003497) PACRGL (ENSUMAG00000003485) SLIT2 (ENSUMAG00000003439) American black bear MODERN SPECIES 2594 PPARGC1A (ENSUAMG00000020843) ##22 Giant Panda MODERN SPECIES 2 ENSAMEG00000023854 CAR1 (ENSAMEG00000031321) CCKAR (ENSAMEG00000014732) RBPJ (ENSAMEG00000018082) SMIM20 (ENSAMEG00000018092) SEL1L3 (ENSAMEG00000018094) SLC34A2 (ENSAMEG00000018105) ANAPC4 (ENSAMEG00000018114) ZCCHC4 (ENSAMEG00000027841) PI4K2B (ENSAMEG00000014735) SEPSECS (ENSAMEG00000014700) LGI2 (ENSAMEG00000008417) CCDC149 (ENSAMEG00000008440) SOD3 (ENSAMEG00000023550) DHX15 (ENSAMEG00000010482) PPARGC1A (ENSAMEG00000010421) ##22 GBA3 (ENSAMEG00000006494) ADGRA3 (ENSAMEG00000006461) KCNIP4 (ENSAMEG00000006445) PACRGL (ENSAMEG00000006436) SLIT2 (ENSAMEG00000006196) LCORL (ENSAMEG00000000192) NCAPG (ENSAMEG00000000194) DCAF16 (ENSAMEG00000019722) ENSAMEG00000028828 FAM184B (ENSAMEG00000000208) MED28 (ENSAMEG00000001760) LAP3 (ENSAMEG00000001748) CLRN2 (ENSAMEG00000001743) QDPR (ENSAMEG00000001735) LDB2 (ENSAMEG00000001733) Mustelinae ANCESTRAL SPECIES 112 ENSGT00970000193677 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00960000191062 Ferret MODERN SPECIES 252 TBC1D19 (ENSMPUG00000016711) CCKAR (ENSMPUG00000016713) RBPJ (ENSMPUG00000016715) ENSMPUG00000016716 ENSMPUG00000016717 SEL1L3 (ENSMPUG00000016719) SLC34A2 (ENSMPUG00000016722) ANAPC4 (ENSMPUG00000016724) ZCCHC4 (ENSMPUG00000016727) PI4K2B (ENSMPUG00000016729) SEPSECS (ENSMPUG00000016732) LGI2 (ENSMPUG00000016733) CCDC149 (ENSMPUG00000016734) SOD3 (ENSMPUG00000020131) DHX15 (ENSMPUG00000016735) PPARGC1A (ENSMPUG00000016736) ##22 GBA3 (ENSMPUG00000016738) ADGRA3 (ENSMPUG00000016741) KCNIP4 (ENSMPUG00000016743) PACRGL (ENSMPUG00000016745) SLIT2 (ENSMPUG00000016755) American mink MODERN SPECIES 32 CCKAR (ENSNVIG00000013587) ENSNVIG00000013579 RBPJ (ENSNVIG00000013517) SMIM20 (ENSNVIG00000013500) SEL1L3 (ENSNVIG00000013431) SLC34A2 (ENSNVIG00000013390) ANAPC4 (ENSNVIG00000013320) ZCCHC4 (ENSNVIG00000013287) PI4K2B (ENSNVIG00000013261) ENSNVIG00000013245 SEPSECS (ENSNVIG00000013227) LGI2 (ENSNVIG00000013203) CCDC149 (ENSNVIG00000013098) SOD3 (ENSNVIG00000013084) DHX15 (ENSNVIG00000013069) PPARGC1A (ENSNVIG00000012965) ##22 ENSNVIG00000012944 ADGRA3 (ENSNVIG00000012904) KCNIP4 (ENSNVIG00000012734) PACRL (ENSNVIG00000012630) SLIT2 (ENSNVIG00000012226) ENSNVIG00000012188 LCORL (ENSNVIG00000012088) NCAPG (ENSNVIG00000012054) ENSNVIG00000012047 DCA16 (ENSNVIG00000012046) FAM184B (ENSNVIG00000012028) MED28 (ENSNVIG00000011999) LAP3 (ENSNVIG00000011980) CLRN2 (ENSNVIG00000011967) QDPR (ENSNVIG00000011920) Canidae ANCESTRAL SPECIES 21 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00990000204159 ENSGT00390000012430 ENSGT00940000157061.a ENSGT00940000159900 ENSGT00940000160999 ENSGT00740000115581.f ENSGT00940000165250 ENSGT00940000156736 Canis_lupus ANCESTRAL SPECIES 23 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556.i ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000163089.b.l.a.b ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT00940000157061.a ENSGT00940000159900 ENSGT00940000153137.a.a.f ENSGT00940000160999 ENSGT00740000115581.f ENSGT00940000165250 Dog MODERN SPECIES 22 CAR1 (ENSCAFG00845005825) CCKAR (ENSCAFG00845005880) RBPJ (ENSCAFG00845005977) ENSCAFG00845006105 SMIM20 (ENSCAFG00845006127) SEL1L3 (ENSCAFG00845006276) SLC34A2 (ENSCAFG00845006845) ANAPC4 (ENSCAFG00845007014) ZCCHC4 (ENSCAFG00845007308) PI4K2B (ENSCAFG00845007474) SEPSECS (ENSCAFG00845007550) LGI2 (ENSCAFG00845007610) CCDC149 (ENSCAFG00845007671) SOD3 (ENSCAFG00845007800) DHX15 (ENSCAFG00845007821) PPARGC1A (ENSCAFG00845008311) ##22 GBA3 (ENSCAFG00845008730) ADGRA3 (ENSCAFG00845008840) KCNIP4 (ENSCAFG00845009227) PACRGL (ENSCAFG00845009809) ENSCAFG00845010003 SLIT2 (ENSCAFG00845010097) ENSCAFG00845000335 LCORL (ENSCAFG00845000382) NCAPG (ENSCAFG00845000445) ENSCAFG00845000722 ENSCAFG00845000771 ENSCAFG00845000883 ENSCAFG00845000897 TMED11 (ENSCAFG00845000919) ENSCAFG00845000939 Dingo MODERN SPECIES 138 CCKAR (ENSCAFG00020027326) RBPJ (ENSCAFG00020027303) ENSCAFG00020027299 SEL1L3 (ENSCAFG00020027291) SLC34A2 (ENSCAFG00020027270) ANAPC4 (ENSCAFG00020027256) ENSCAFG00020027253 ENSCAFG00020027252 PI4K2B (ENSCAFG00020027250) SEPSECS (ENSCAFG00020027249) LGI2 (ENSCAFG00020027248) CCDC149 (ENSCAFG00020027247) SOD3 (ENSCAFG00020027246) DHX15 (ENSCAFG00020027245) ENSCAFG00020027244 PPARGC1A (ENSCAFG00020027242) ##22 GBA3 (ENSCAFG00020027241) ADGRA3 (ENSCAFG00020027238) KCNIP4 (ENSCAFG00020027237) PACRGL (ENSCAFG00020027236) ENSCAFG00020027235 SLIT2 (ENSCAFG00020027191) ENSCAFG00020027105 ENSCAFG00020027097 NCAPG (ENSCAFG00020027090) ENSCAFG00020027087 DCAF16 (ENSCAFG00020027085) CTBP1 (ENSCAFG00020027072) SPON2 (ENSCAFG00020027066) ENSCAFG00020027065 ENSCAFG00020027063 Red fox MODERN SPECIES 1 ENSVVUG00000013949 TBC1D19 (ENSVVUG00000013875) CCKAR (ENSVVUG00000013858) RBPJ (ENSVVUG00000013837) SMIM20 (ENSVVUG00000013812) SEL1L3 (ENSVVUG00000013804) SLC34A2 (ENSVVUG00000013552) ANAPC4 (ENSVVUG00000013531) ZCCHC4 (ENSVVUG00000013506) PI4K2B (ENSVVUG00000013490) SEPSECS (ENSVVUG00000013476) LGI2 (ENSVVUG00000013458) CCDC149 (ENSVVUG00000013407) DHX15 (ENSVVUG00000013395) ENSVVUG00000013388 PPARGC1A (ENSVVUG00000013365) ##22 ENSVVUG00000013361 GBA3 (ENSVVUG00000013354) ADGRA3 (ENSVVUG00000013329) KCNIP4 (ENSVVUG00000013290) PACRGL (ENSVVUG00000013266) SLIT2 (ENSVVUG00000013236) LCORL (ENSVVUG00000013122) NCAPG (ENSVVUG00000013106) ENSVVUG00000013105 DCAF16 (ENSVVUG00000013103) CTBP1 (ENSVVUG00000013060) SPON2 (ENSVVUG00000013053) ENSVVUG00000013034 FGFRL1 (ENSVVUG00000013026) IDUA (ENSVVUG00000013021) Felidae ANCESTRAL SPECIES 4 ENSGT00970000193677 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT00990000204159 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Panthera ANCESTRAL SPECIES 5 ENSGT00970000193677 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT00990000204159 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Panthera_a ANCESTRAL SPECIES 2 ENSGT00970000193677 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT00990000204159 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a lion MODERN SPECIES 4 ENSPLOG00000013017 CCKAR (ENSPLOG00000013057) RBPJ (ENSPLOG00000013224) ENSPLOG00000013526 SEL1L3 (ENSPLOG00000013599) SLC34A2 (ENSPLOG00000013975) ANAPC4 (ENSPLOG00000014198) ZCCHC4 (ENSPLOG00000014263) PI4K2B (ENSPLOG00000014324) SEPSECS (ENSPLOG00000014441) LGI2 (ENSPLOG00000014551) CCDC149 (ENSPLOG00000014724) SOD3 (ENSPLOG00000015212) DHX15 (ENSPLOG00000015238) ENSPLOG00000015280 PPARGC1A (ENSPLOG00000015341) ##22 GBA3 (ENSPLOG00000015752) ADGRA3 (ENSPLOG00000015872) KCNIP4 (ENSPLOG00000016314) PACRGL (ENSPLOG00000016813) SLIT2 (ENSPLOG00000017126) LCORL (ENSPLOG00000018632) NCAPG (ENSPLOG00000018793) DCAF16 (ENSPLOG00000018834) ENSPLOG00000018846 FAM184B (ENSPLOG00000018870) MED28 (ENSPLOG00000019074) LAP3 (ENSPLOG00000019113) CLRN2 (ENSPLOG00000019148) QDPR (ENSPLOG00000019184) LDB2 (ENSPLOG00000019312) leopard MODERN SPECIES 25 CCKAR (ENSPPRG00000024018) RBPJ (ENSPPRG00000024386) SMIM20 (ENSPPRG00000018812) SEL1L3 (ENSPPRG00000018369) ENSPPRG00000009004 SLC34A2 (ENSPPRG00000008628) ANAPC4 (ENSPPRG00000006664) ZCCHC4 (ENSPPRG00000006329) PI4K2B (ENSPPRG00000006151) SEPSECS (ENSPPRG00000005618) LGI2 (ENSPPRG00000005473) CCDC149 (ENSPPRG00000005074) SOD3 (ENSPPRG00000020880) DHX15 (ENSPPRG00000002164) ENSPPRG00000020851 PPARGC1A (ENSPPRG00000001711) ##22 GBA3 (ENSPPRG00000000195) ADGRA3 (ENSPPRG00000022711) KCNIP4 (ENSPPRG00000023823) PACRGL (ENSPPRG00000024486) SLIT2 (ENSPPRG00000024875) LCORL (ENSPPRG00000011434) NCAPG (ENSPPRG00000009186) DCAF16 (ENSPPRG00000019998) ENSPPRG00000019983 FAM184B (ENSPPRG00000008574) MED28 (ENSPPRG00000007960) LAP3 (ENSPPRG00000007349) CLRN2 (ENSPPRG00000006945) QDPR (ENSPPRG00000006672) LDB2 (ENSPPRG00000005287) Tiger MODERN SPECIES 439 ENSPTIG00000003842 PPARGC1A (ENSPTIG00000007378) ##22 GBA3 (ENSPTIG00000009959) ADGRA3 (ENSPTIG00000011265) KCNIP4 (ENSPTIG00000012906) PACRGL (ENSPTIG00000017096) SLIT2 (ENSPTIG00000019043) LCORL (ENSPTIG00000007463) NCAPG (ENSPTIG00000010747) DCAF16 (ENSPTIG00000005268) ENSPTIG00000005270 FAM184B (ENSPTIG00000012636) MED28 (ENSPTIG00000013729) LAP3 (ENSPTIG00000013871) CLRN2 (ENSPTIG00000015501) QDPR (ENSPTIG00000015700) LDB2 (ENSPTIG00000017280) Cat MODERN SPECIES 235 CAR1 (ENSFCAG00000049200) CCKAR (ENSFCAG00000007718) RBPJ (ENSFCAG00000030363) SMIM20 (ENSFCAG00000046718) SEL1L3 (ENSFCAG00000013720) SLC34A2 (ENSFCAG00000029965) ANAPC4 (ENSFCAG00000042946) ZCCHC4 (ENSFCAG00000023396) PI4K2B (ENSFCAG00000025109) SEPSECS (ENSFCAG00000023094) LGI2 (ENSFCAG00000032361) CCDC149 (ENSFCAG00000015383) SOD3 (ENSFCAG00000045310) DHX15 (ENSFCAG00000009234) ENSFCAG00000040987 PPARGC1A (ENSFCAG00000000043) ##22 GBA3 (ENSFCAG00000031717) ADGRA3 (ENSFCAG00000027302) KCNIP4 (ENSFCAG00000014899) PACRGL (ENSFCAG00000035192) SLIT2 (ENSFCAG00000031735) LCORL (ENSFCAG00000029474) NCAPG (ENSFCAG00000030778) DCAF16 (ENSFCAG00000002836) ENSFCAG00000038117 FAM184B (ENSFCAG00000002835) MED28 (ENSFCAG00000041406) LAP3 (ENSFCAG00000026136) CLRN2 (ENSFCAG00000002833) QDPR (ENSFCAG00000002832) LDB2 (ENSFCAG00000010092) Laurasiatheria_c ANCESTRAL SPECIES 8 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT00990000204159 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Equus ANCESTRAL SPECIES 12 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT01090000263426 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT00990000204159 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 Donkey MODERN SPECIES 22 STIM2 (ENSEASG00005008051) TBC1D19 (ENSEASG00005008046) CCKAR (ENSEASG00005038229) RBPJ (ENSEASG00005008027) SMIM20 (ENSEASG00005024155) SEL1L3 (ENSEASG00005008020) SLC34A2 (ENSEASG00005008016) ANAPC4 (ENSEASG00005008014) ZCCHC4 (ENSEASG00005008011) PI4K2B (ENSEASG00005008006) SEPSECS (ENSEASG00005008003) LGI2 (ENSEASG00005008001) CCDC149 (ENSEASG00005008000) SOD3 (ENSEASG00005033891) ENSEASG00005007991 ENSEASG00005007984 ##22 ENSEASG00005009587 ZFAND5 (ENSEASG00005009586) TMC1 (ENSEASG00005036859) ALDH1A1 (ENSEASG00005009584) ANXA1 (ENSEASG00005007925) RORB (ENSEASG00005007922) TRPM6 (ENSEASG00005007843) ENSEASG00005007794 ENSEASG00005027501 ENSEASG00005005051 TLE4 (ENSEASG00005005032) PSAT1 (ENSEASG00005005021) CEP78 (ENSEASG00005005009) ENSEASG00005005001 GNAQ (ENSEASG00005004998) Horse MODERN SPECIES 22 CCKAR (ENSECAG00000017266) RBPJ (ENSECAG00000019257) ENSECAG00000002201 SMIM20 (ENSECAG00000041550) SEL1L3 (ENSECAG00000000638) SLC34A2 (ENSECAG00000013315) ANAPC4 (ENSECAG00000017692) ZCCHC4 (ENSECAG00000007352) PI4K2B (ENSECAG00000008251) SEPSECS (ENSECAG00000009932) LGI2 (ENSECAG00000016152) CCDC149 (ENSECAG00000022451) SOD3 (ENSECAG00000035543) ENSECAG00000045825 DHX15 (ENSECAG00000023224) PPARGC1A (ENSECAG00000009164) ##22 GBA3 (ENSECAG00000014346) ADGRA3 (ENSECAG00000014865) KCNIP4 (ENSECAG00000018365) PACRGL (ENSECAG00000021508) SLIT2 (ENSECAG00000022407) ENSECAG00000057886 ENSECAG00000003040 LCORL (ENSECAG00000000648) NCAPG (ENSECAG00000007470) DCAF16 (ENSECAG00000002410) FAM184B (ENSECAG00000013661) MED28 (ENSECAG00000017465) LAP3 (ENSECAG00000018272) CLRN2 (ENSECAG00000039666) QDPR (ENSECAG00000005662) Chiroptera ANCESTRAL SPECIES 9 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00940000165139.b ENSGT00940000162414.n ENSGT00390000001577 ENSGT00390000012430 ENSGT00990000204159 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b Microchiroptera ANCESTRAL SPECIES 10 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00940000165139.b ENSGT00940000162414.n ENSGT00390000001577 ENSGT00390000012430 ENSGT00990000204159 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b Greater horseshoe bat MODERN SPECIES 23 RBPJ (ENSRFEG00010000987) ENSRFEG00010001068 ENSRFEG00010001077 SMIM20 (ENSRFEG00010001089) SEL1L3 (ENSRFEG00010001115) SLC34A2 (ENSRFEG00010001179) ANAPC4 (ENSRFEG00010001248) ZCCHC4 (ENSRFEG00010001312) PI4K2B (ENSRFEG00010001371) SEPSECS (ENSRFEG00010001416) LGI2 (ENSRFEG00010001447) CCDC149 (ENSRFEG00010001512) SOD3 (ENSRFEG00010001657) DHX15 (ENSRFEG00010001673) ENSRFEG00010001699 PPARGC1A (ENSRFEG00010001741) ##22 GBA3 (ENSRFEG00010001815) ADGRA3 (ENSRFEG00010001866) KCNIP4 (ENSRFEG00010001993) ENSRFEG00010002058 PACRGL (ENSRFEG00010002088) SLIT2 (ENSRFEG00010002355) ENSRFEG00010002832 LCORL (ENSRFEG00010002869) NCAPG (ENSRFEG00010002948) DCAF16 (ENSRFEG00010002974) ENSRFEG00010002981 FAM184B (ENSRFEG00010003021) ENSRFEG00010003059 LAP3 (ENSRFEG00010003082) CLRN2 (ENSRFEG00010003114) Microbat MODERN SPECIES 1049 TBC1D19 (ENSMLUG00000017193) ENSMLUG00000023226 CCKAR (ENSMLUG00000017191) RBPJ (ENSMLUG00000017187) SMIM20 (ENSMLUG00000000713) SEL1L3 (ENSMLUG00000000702) ENSMLUG00000000694 ANAPC4 (ENSMLUG00000004233) ZCCHC4 (ENSMLUG00000004225) PI4K2B (ENSMLUG00000001044) SEPSECS (ENSMLUG00000005883) LGI2 (ENSMLUG00000005887) CCDC149 (ENSMLUG00000014745) SOD3 (ENSMLUG00000014742) DHX15 (ENSMLUG00000001617) PPARGC1A (ENSMLUG00000016307) ##22 ENSMLUG00000027956 ENSMLUG00000027157 GBA3 (ENSMLUG00000009213) ADGRA3 (ENSMLUG00000003454) ENSMLUG00000023890 Megabat MODERN SPECIES 4799 PPARGC1A (ENSPVAG00000004965) ##22 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183137.b.a ##22 Common shrew MODERN SPECIES 784 PPARGC1A (ENSSARG00000000575) ##22 Hedgehog MODERN SPECIES 1245 PPARGC1A (ENSEEUG00000009219) ##22 Euarchontoglires ANCESTRAL SPECIES 9 ENSGT00940000174987 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00990000204159 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b Primates ANCESTRAL SPECIES 10 ENSGT00940000174987 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00990000204159 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b Haplorrhini ANCESTRAL SPECIES 23 ENSGT00940000174987 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00990000204159 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b Simiiformes ANCESTRAL SPECIES 10 ENSGT00940000174987 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b Catarrhini ANCESTRAL SPECIES 14 ENSGT00940000174987 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b Hominoidea ANCESTRAL SPECIES 10 ENSGT00390000015965 ENSGT00940000174987 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT01100000263819 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Hominidae ANCESTRAL SPECIES 12 ENSGT00390000015965 ENSGT00940000174987 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT01100000263819 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 11 ENSGT00390000015965 ENSGT00940000174987 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00950000182891.a.a.b.a.b.a.s.c.a ENSGT00940000157235 ENSGT00940000158985.b ENSGT00940000159756 ENSGT00940000158402 ENSGT01030000234946.d.a.b.b ENSGT00940000154965.B ENSGT00390000001577 ENSGT01100000263819 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b Homo/Pan group ANCESTRAL SPECIES 10 ENSGT00390000015965 ENSGT00940000174987 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00950000182891.a.a.b.a.b.a.s.c.a ENSGT00940000157235 ENSGT00940000158985.b ENSGT00940000159756 ENSGT00940000158402 ENSGT01030000234946.d.a.b.b ENSGT00940000154965.B ENSGT00390000001577 ENSGT01100000263819 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b Pan ANCESTRAL SPECIES 7 ENSGT00390000015965 ENSGT00940000174987 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00950000182891.a.a.b.a.b.a.s.c.a ENSGT00940000157235 ENSGT00940000158985.b ENSGT00940000159756 ENSGT00940000158402 ENSGT01030000234946.d.a.b.b ENSGT00940000154965.B ENSGT00390000001577 ENSGT01100000263819 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b Chimpanzee MODERN SPECIES 17 STIM2 (ENSPTRG00000015971) TBC1D19 (ENSPTRG00000015970) CCKAR (ENSPTRG00000015969) RBPJ (ENSPTRG00000015968) ENSPTRG00000015967 SEL1L3 (ENSPTRG00000015966) SLC34A2 (ENSPTRG00000015965) ANAPC4 (ENSPTRG00000015963) ZCCHC4 (ENSPTRG00000015962) PI4K2B (ENSPTRG00000015960) SEPSECS (ENSPTRG00000015959) LGI2 (ENSPTRG00000045126) CCDC149 (ENSPTRG00000015957) SOD3 (ENSPTRG00000015956) DHX15 (ENSPTRG00000015955) PPARGC1A (ENSPTRG00000015954) ##22 GBA3 (ENSPTRG00000043929) ENSPTRG00000042867 ADGRA3 (ENSPTRG00000015949) KCNIP4 (ENSPTRG00000015948) PACRGL (ENSPTRG00000015945) SLIT2 (ENSPTRG00000024331) ENSPTRG00000050513 LCORL (ENSPTRG00000052306) NCAPG (ENSPTRG00000015942) ENSPTRG00000045108 DCAF16 (ENSPTRG00000051571) FAM184B (ENSPTRG00000015940) MED28 (ENSPTRG00000045116) LAP3 (ENSPTRG00000015938) CLRN2 (ENSPTRG00000050671) Bonobo MODERN SPECIES 17 TBC1D19 (ENSPPAG00000039764) ENSPPAG00000027805 CCKAR (ENSPPAG00000027751) RBPJ (ENSPPAG00000042016) SMIM20 (ENSPPAG00000037198) SEL1L3 (ENSPPAG00000026819) SLC34A2 (ENSPPAG00000031554) ANAPC4 (ENSPPAG00000040743) ZCCHC4 (ENSPPAG00000031116) PI4K2B (ENSPPAG00000040564) SEPSECS (ENSPPAG00000037022) LGI2 (ENSPPAG00000043039) CCDC149 (ENSPPAG00000040269) SOD3 (ENSPPAG00000022679) DHX15 (ENSPPAG00000030385) PPARGC1A (ENSPPAG00000034694) ##22 GBA3 (ENSPPAG00000040905) ENSPPAG00000011801 ADGRA3 (ENSPPAG00000035849) KCNIP4 (ENSPPAG00000033844) PACRGL (ENSPPAG00000027879) SLIT2 (ENSPPAG00000043820) LCORL (ENSPPAG00000039308) NCAPG (ENSPPAG00000028077) ENSPPAG00000023045 DCAF16 (ENSPPAG00000021334) FAM184B (ENSPPAG00000038055) MED28 (ENSPPAG00000034569) LAP3 (ENSPPAG00000029619) CLRN2 (ENSPPAG00000027659) QDPR (ENSPPAG00000036323) Human MODERN SPECIES 16 STIM2 (ENSG00000109689) TBC1D19 (ENSG00000109680) CCKAR (ENSG00000163394) RBPJ (ENSG00000168214) SMIM20 (ENSG00000250317) SEL1L3 (ENSG00000091490) SLC34A2 (ENSG00000157765) ANAPC4 (ENSG00000053900) ZCCHC4 (ENSG00000168228) PI4K2B (ENSG00000038210) SEPSECS (ENSG00000109618) LGI2 (ENSG00000153012) CCDC149 (ENSG00000181982) SOD3 (ENSG00000109610) DHX15 (ENSG00000109606) PPARGC1A (ENSG00000109819) ##22 GBA3 (ENSG00000249948) ADGRA3 (ENSG00000152990) KCNIP4 (ENSG00000185774) PACRGL (ENSG00000163138) SLIT2 (ENSG00000145147) LCORL (ENSG00000178177) NCAPG (ENSG00000109805) DCAF16 (ENSG00000163257) FAM184B (ENSG00000047662) MED28 (ENSG00000118579) LAP3 (ENSG00000002549) CLRN2 (ENSG00000249581) QDPR (ENSG00000151552) LDB2 (ENSG00000169744) TAPT1 (ENSG00000169762) Gorilla MODERN SPECIES 17 ENSGGOG00000038446 STIM2 (ENSGGOG00000000474) TBC1D19 (ENSGGOG00000025239) CCKAR (ENSGGOG00000015177) RBPJ (ENSGGOG00000004582) ENSGGOG00000013757 SEL1L3 (ENSGGOG00000001417) SLC34A2 (ENSGGOG00000016668) ANAPC4 (ENSGGOG00000025631) ZCCHC4 (ENSGGOG00000016476) PI4K2B (ENSGGOG00000014057) SEPSECS (ENSGGOG00000025528) LGI2 (ENSGGOG00000023809) CCDC149 (ENSGGOG00000010166) DHX15 (ENSGGOG00000016819) PPARGC1A (ENSGGOG00000009810) ##22 GBA3 (ENSGGOG00000013597) ENSGGOG00000026378 ADGRA3 (ENSGGOG00000026666) ENSGGOG00000038375 PACRGL (ENSGGOG00000012603) SLIT2 (ENSGGOG00000006151) ENSGGOG00000037439 LCORL (ENSGGOG00000014894) NCAPG (ENSGGOG00000015019) ENSGGOG00000038365 FAM184B (ENSGGOG00000007263) MED28 (ENSGGOG00000001114) LAP3 (ENSGGOG00000001110) CLRN2 (ENSGGOG00000004114) QDPR (ENSGGOG00000004110) Orangutan MODERN SPECIES 17 CCKAR (ENSPPYG00000014653) RBPJ (ENSPPYG00000014652) SMIM20 (ENSPPYG00000014651) SEL1L3 (ENSPPYG00000014650) ENSPPYG00000031785 SLC34A2 (ENSPPYG00000014649) ANAPC4 (ENSPPYG00000034769) ZCCHC4 (ENSPPYG00000014647) PI4K2B (ENSPPYG00000014646) SEPSECS (ENSPPYG00000014645) LGI2 (ENSPPYG00000039828) CCDC149 (ENSPPYG00000014643) SOD3 (ENSPPYG00000014642) ENSPPYG00000036250 DHX15 (ENSPPYG00000014641) PPARGC1A (ENSPPYG00000014640) ##22 GBA3 (ENSPPYG00000014639) ENSPPYG00000014638 ADGRA3 (ENSPPYG00000014637) KCNIP4 (ENSPPYG00000030455) PACRGL (ENSPPYG00000014634) SLIT2 (ENSPPYG00000014633) ENSPPYG00000036110 LCORL (ENSPPYG00000014631) NCAPG (ENSPPYG00000014630) FAM184B (ENSPPYG00000014628) MED28 (ENSPPYG00000014627) LAP3 (ENSPPYG00000014626) CLRN2 (ENSPPYG00000014625) QDPR (ENSPPYG00000014624) LDB2 (ENSPPYG00000014623) Gibbon MODERN SPECIES 12 TBC1D19 (ENSNLEG00000016920) CCKAR (ENSNLEG00000016913) RBPJ (ENSNLEG00000016895) ENSNLEG00000032692 ENSNLEG00000016894 SEL1L3 (ENSNLEG00000016867) SLC34A2 (ENSNLEG00000016860) ANAPC4 (ENSNLEG00000016831) ZCCHC4 (ENSNLEG00000016824) PI4K2B (ENSNLEG00000016814) SEPSECS (ENSNLEG00000016800) LGI2 (ENSNLEG00000016796) CCDC149 (ENSNLEG00000016779) SOD3 (ENSNLEG00000032570) DHX15 (ENSNLEG00000016767) PPARGC1A (ENSNLEG00000016760) ##22 GBA3 (ENSNLEG00000016754) ENSNLEG00000027847 ADGRA3 (ENSNLEG00000016741) KCNIP4 (ENSNLEG00000016720) PACRGL (ENSNLEG00000016706) SLIT2 (ENSNLEG00000016689) ENSNLEG00000031015 LCORL (ENSNLEG00000016684) NCAPG (ENSNLEG00000016632) ENSNLEG00000036017 FAM184B (ENSNLEG00000031656) ENSNLEG00000016620 LAP3 (ENSNLEG00000016606) CLRN2 (ENSNLEG00000016604) QDPR (ENSNLEG00000016583) Cercopithecidae ANCESTRAL SPECIES 10 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b Rhinopithecus ANCESTRAL SPECIES 355 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 Golden snub-nosed monkey MODERN SPECIES 1053 SLC34A2 (ENSRROG00000031171) ANAPC4 (ENSRROG00000032130) ZCCHC4 (ENSRROG00000002974) PI4K2B (ENSRROG00000028941) SEPSECS (ENSRROG00000022363) LGI2 (ENSRROG00000043141) CCDC149 (ENSRROG00000040964) SOD3 (ENSRROG00000020067) DHX15 (ENSRROG00000039130) PPARGC1A (ENSRROG00000010419) ##22 ENSRROG00000028618 Black snub-nosed monkey MODERN SPECIES 194 SLC34A2 (ENSRBIG00000020575) ANAPC4 (ENSRBIG00000043872) ZCCHC4 (ENSRBIG00000034117) ENSRBIG00000038457 PI4K2B (ENSRBIG00000033543) SEPSECS (ENSRBIG00000030491) LGI2 (ENSRBIG00000027385) CCDC149 (ENSRBIG00000029170) DHX15 (ENSRBIG00000037326) PPARGC1A (ENSRBIG00000032333) ##22 ENSRBIG00000026496 GBA3 (ENSRBIG00000036546) ENSRBIG00000026616 ADGRA3 (ENSRBIG00000029625) KCNIP4 (ENSRBIG00000028034) PACRGL (ENSRBIG00000037932) SLIT2 (ENSRBIG00000031606) TRPV6 (ENSRBIG00000040293) EPHB6 (ENSRBIG00000044488) ENSRBIG00000026887 ENSRBIG00000042167 ENSRBIG00000026151 ENSRBIG00000008812 ENSRBIG00000013946 ENSRBIG00000019362 Cercopithecinae ANCESTRAL SPECIES 14 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b Vervet Monkey MODERN SPECIES 19 ENSCSAG00000016720 TBC1D19 (ENSCSAG00000016710) CCKAR (ENSCSAG00000016683) RBPJ (ENSCSAG00000016678) ENSCSAG00000016669 SEL1L3 (ENSCSAG00000016666) SLC34A2 (ENSCSAG00000016651) ANAPC4 (ENSCSAG00000016642) ZCCHC4 (ENSCSAG00000016633) PI4K2B (ENSCSAG00000016627) SEPSECS (ENSCSAG00000016622) LGI2 (ENSCSAG00000016614) CCDC149 (ENSCSAG00000016607) SOD3 (ENSCSAG00000019694) DHX15 (ENSCSAG00000016601) PPARGC1A (ENSCSAG00000016575) ##22 GBA3 (ENSCSAG00000016567) ADGRA3 (ENSCSAG00000016562) KCNIP4 (ENSCSAG00000016556) PACRGL (ENSCSAG00000016548) SLIT2 (ENSCSAG00000016541) ENSCSAG00000016527 ENSCSAG00000016522 LCORL (ENSCSAG00000016518) NCAPG (ENSCSAG00000016516) DCAF16 (ENSCSAG00000019695) FAM184B (ENSCSAG00000016499) MED28 (ENSCSAG00000016495) LAP3 (ENSCSAG00000016492) CLRN2 (ENSCSAG00000016486) QDPR (ENSCSAG00000016485) Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT00390000005197.a ENSGT00390000002398.j ENSGT00390000014814.a.b.a.b.b ENSGT00390000002398.i.a ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000003682.ib.a.b.f.b.a.b Cercopithecinae_b ANCESTRAL SPECIES 6 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000014814.a.b.a.b.b ENSGT00390000002398.j ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000003682.ib.a.b.f.b.a.b Olive baboon MODERN SPECIES 13 ENSPANG00000041131 #29 SLC34A2 (ENSPANG00000043751) ENSPANG00000046005 ##37 ENSPANG00000037863 ##24 ANAPC4 (ENSPANG00000019352) ZCCHC4 (ENSPANG00000013373) ENSPANG00000008337 PI4K2B (ENSPANG00000024999) SEPSECS (ENSPANG00000021177) ENSPANG00000050688 LGI2 (ENSPANG00000016910) CCDC149 (ENSPANG00000020855) SOD3 (ENSPANG00000044825) ENSPANG00000042441 DHX15 (ENSPANG00000020685) PPARGC1A (ENSPANG00000005420) ##22 GBA3 (ENSPANG00000007746) ADGRA3 (ENSPANG00000008144) KCNIP4 (ENSPANG00000001124) ENSPANG00000046365 ##14 PACRGL (ENSPANG00000001123) SLIT2 (ENSPANG00000007747) ENSPANG00000044021 LCORL (ENSPANG00000024022) NCAPG (ENSPANG00000000938) DCAF16 (ENSPANG00000004496) FAM184B (ENSPANG00000011425) MED28 (ENSPANG00000007793) LAP3 (ENSPANG00000005671) CLRN2 (ENSPANG00000018188) QDPR (ENSPANG00000010254) Cercopithecinae_d ANCESTRAL SPECIES 91 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398.j ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Sooty mangabey MODERN SPECIES 551 TBC1D19 (ENSCATG00000009189) CCKAR (ENSCATG00000038819) RBPJ (ENSCATG00000044181) ENSCATG00000032458 SEL1L3 (ENSCATG00000038183) SLC34A2 (ENSCATG00000029842) ANAPC4 (ENSCATG00000035985) ZCCHC4 (ENSCATG00000028628) PI4K2B (ENSCATG00000015768) SEPSECS (ENSCATG00000041245) LGI2 (ENSCATG00000043883) CCDC149 (ENSCATG00000037847) SOD3 (ENSCATG00000021168) DHX15 (ENSCATG00000000715) ENSCATG00000022340 PPARGC1A (ENSCATG00000032575) ##22 GBA3 (ENSCATG00000042364) ADGRA3 (ENSCATG00000042545) KCNIP4 (ENSCATG00000031858) PACRGL (ENSCATG00000043616) SLIT2 (ENSCATG00000044093) LCORL (ENSCATG00000032265) NCAPG (ENSCATG00000032636) DCAF16 (ENSCATG00000014975) ENSCATG00000016096 FAM184B (ENSCATG00000040065) MED28 (ENSCATG00000030546) LAP3 (ENSCATG00000040965) CLRN2 (ENSCATG00000032386) QDPR (ENSCATG00000029669) LDB2 (ENSCATG00000019886) Drill MODERN SPECIES 1063 CCDC149 (ENSMLEG00000031412) DHX15 (ENSMLEG00000032462) ENSMLEG00000027556 PPARGC1A (ENSMLEG00000034233) ##22 GBA3 (ENSMLEG00000030270) ENSMLEG00000037885 ADGRA3 (ENSMLEG00000041303) ENSMLEG00000026837 ENSMLEG00000027467 ENSMLEG00000027749 ENSMLEG00000002968 Macaca ANCESTRAL SPECIES 25 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000014814.a.b.a.b.b ENSGT00390000002398.i.a ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Pig-tailed macaque MODERN SPECIES 141 CCKAR (ENSMNEG00000038424) RBPJ (ENSMNEG00000037915) ENSMNEG00000027453 ENSMNEG00000045287 SEL1L3 (ENSMNEG00000044018) SLC34A2 (ENSMNEG00000033278) ANAPC4 (ENSMNEG00000044256) ZCCHC4 (ENSMNEG00000027221) PI4K2B (ENSMNEG00000010678) SEPSECS (ENSMNEG00000041117) LGI2 (ENSMNEG00000015411) CCDC149 (ENSMNEG00000034296) ENSMNEG00000005920 ##18 DHX15 (ENSMNEG00000035145) ENSMNEG00000013564 PPARGC1A (ENSMNEG00000028682) ##22 GBA3 (ENSMNEG00000038431) ADGRA3 (ENSMNEG00000030797) KCNIP4 (ENSMNEG00000031720) PACRGL (ENSMNEG00000038893) SLIT2 (ENSMNEG00000043095) LCORL (ENSMNEG00000043804) NCAPG (ENSMNEG00000039630) DCAF16 (ENSMNEG00000024029) ENSMNEG00000026854 FAM184B (ENSMNEG00000006055) MED28 (ENSMNEG00000037815) LAP3 (ENSMNEG00000044815) CLRN2 (ENSMNEG00000045042) QDPR (ENSMNEG00000033228) LDB2 (ENSMNEG00000036183) Macaca_a ANCESTRAL SPECIES 12 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398.i.a ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT01100000263493.a.b.a.a.b.a.a.b.b.b.a.b.a.a.a.a.a.b ##37 ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.a.a.b.a.b.b.a ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B.k ENSGT00940000163244.d.b.a.b.a.a.d.a ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Rhesus MODERN SPECIES 15 RBPJ (ENSMMUG00000015828) ENSMMUG00000006680 SEL1L3 (ENSMMUG00000020349) SLC34A2 (ENSMMUG00000021135) ENSMMUG00000049554 ##37 ENSMMUG00000053638 ANAPC4 (ENSMMUG00000004458) PI4K2B (ENSMMUG00000003629) SEPSECS (ENSMMUG00000019784) LGI2 (ENSMMUG00000060440) ENSMMUG00000052018 ##14 ENSMMUG00000062929 CCDC149 (ENSMMUG00000004785) SOD3 (ENSMMUG00000002612) DHX15 (ENSMMUG00000009637) PPARGC1A (ENSMMUG00000001844) ##22 GBA3 (ENSMMUG00000005569) ADGRA3 (ENSMMUG00000019963) ENSMMUG00000056216 ##14 ENSMMUG00000053542 ENSMMUG00000056032 KCNIP4 (ENSMMUG00000030380) PACRGL (ENSMMUG00000017670) SLIT2 (ENSMMUG00000002614) LCORL (ENSMMUG00000018073) NCAPG (ENSMMUG00000018070) DCAF16 (ENSMMUG00000056606) FAM184B (ENSMMUG00000018067) MED28 (ENSMMUG00000053953) LAP3 (ENSMMUG00000005732) ENSMMUG00000064012 Crab-eating macaque MODERN SPECIES 15 SMIM20 (ENSMFAG00000033269) SEL1L3 (ENSMFAG00000002093) SLC34A2 (ENSMFAG00000020407) ENSMFAG00000049099 ##37 ENSMFAG00000065080 ANAPC4 (ENSMFAG00000037891) ZCCHC4 (ENSMFAG00000033636) ENSMFAG00000056821 PI4K2B (ENSMFAG00000033102) SEPSECS (ENSMFAG00000003516) LGI2 (ENSMFAG00000036970) CCDC149 (ENSMFAG00000042580) ENSMFAG00000055313 ##18 SOD3 (ENSMFAG00000020365) DHX15 (ENSMFAG00000003532) PPARGC1A (ENSMFAG00000000534) ##22 GBA3 (ENSMFAG00000003358) ADGRA3 (ENSMFAG00000030955) ENSMFAG00000054483 ENSMFAG00000056830 ENSMFAG00000065325 ENSMFAG00000065584 ENSMFAG00000049773 ENSMFAG00000047189 KCNIP4 (ENSMFAG00000042661) PACRGL (ENSMFAG00000029845) SLIT2 (ENSMFAG00000000096) ENSMFAG00000054658 LCORL (ENSMFAG00000043664) NCAPG (ENSMFAG00000000798) DCAF16 (ENSMFAG00000029339) Platyrrhini ANCESTRAL SPECIES 5 ENSGT00390000008128.c.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985.c ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT01100000263819 ENSGT00390000012430.c ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Cebidae ANCESTRAL SPECIES 4 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985.c ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430.c ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Cebidae_a ANCESTRAL SPECIES 34 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985.c ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430.c ENSGT01100000263819 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Bolivian squirrel monkey MODERN SPECIES 65 TBC1D19 (ENSSBOG00000030316) CCKAR (ENSSBOG00000028673) RBPJ (ENSSBOG00000024531) ENSSBOG00000022950 SEL1L3 (ENSSBOG00000031484) SLC34A2 (ENSSBOG00000023680) ANAPC4 (ENSSBOG00000025712) ZCCHC4 (ENSSBOG00000020855) PI4K2B (ENSSBOG00000030108) SEPSECS (ENSSBOG00000023218) LGI2 (ENSSBOG00000033943) CCDC149 (ENSSBOG00000034478) SOD3 (ENSSBOG00000003134) ENSSBOG00000030054 DHX15 (ENSSBOG00000022126) PPARGC1A (ENSSBOG00000006423) ##22 GBA3 (ENSSBOG00000032739) ADGRA3 (ENSSBOG00000006417) ENSSBOG00000032262 ENSSBOG00000023241 KCNIP4 (ENSSBOG00000034826) PACRGL (ENSSBOG00000024032) SLIT2 (ENSSBOG00000017816) ENSSBOG00000030307 LCORL (ENSSBOG00000026920) NCAPG (ENSSBOG00000022967) ENSSBOG00000009348 DCAF16 (ENSSBOG00000013262) FAM184B (ENSSBOG00000030079) MED28 (ENSSBOG00000023401) ENSSBOG00000001223 Capuchin MODERN SPECIES 422 PPARGC1A (ENSCCAG00000024681) ##22 GBA3 (ENSCCAG00000033650) ADGRA3 (ENSCCAG00000034466) Marmoset MODERN SPECIES 15 CCKAR (ENSCJAG00000083281) RBPJ (ENSCJAG00000021033) ENSCJAG00000086596 ENSCJAG00000063163 ##18 SMIM20 (ENSCJAG00000081638) SEL1L3 (ENSCJAG00000021061) SLC34A2 (ENSCJAG00000013366) ENSCJAG00000084062 ##37 ANAPC4 (ENSCJAG00000013271) SEPSECS (ENSCJAG00000013178) LGI2 (ENSCJAG00000042679) CCDC149 (ENSCJAG00000013127) SOD3 (ENSCJAG00000013121) ENSCJAG00000087251 DHX15 (ENSCJAG00000013069) PPARGC1A (ENSCJAG00000013024) ##22 ENSCJAG00000083951 ENSCJAG00000075836 GBA3 (ENSCJAG00000013020) ADGRA3 (ENSCJAG00000012977) ENSCJAG00000075053 KCNIP4 (ENSCJAG00000012939) ENSCJAG00000071426 ##14 ENSCJAG00000080968 PACRGL (ENSCJAG00000012915) SLIT2 (ENSCJAG00000012812) ENSCJAG00000079404 ##14 ENSCJAG00000054556 ENSCJAG00000071321 ENSCJAG00000079516 ENSCJAG00000086132 ##14 Mas night monkey MODERN SPECIES 1274 ENSANAG00000021496 STIM2 (ENSANAG00000030101) TBC1D19 (ENSANAG00000034488) CCKAR (ENSANAG00000033444) RBPJ (ENSANAG00000028890) SMIM20 (ENSANAG00000027622) SEL1L3 (ENSANAG00000035152) SLC34A2 (ENSANAG00000020569) ANAPC4 (ENSANAG00000028966) ZCCHC4 (ENSANAG00000034646) PI4K2B (ENSANAG00000030238) SEPSECS (ENSANAG00000035197) LGI2 (ENSANAG00000027724) CCDC149 (ENSANAG00000029354) DHX15 (ENSANAG00000020669) PPARGC1A (ENSANAG00000035930) ##22 GBA3 (ENSANAG00000033499) ADGRA3 (ENSANAG00000029226) KCNIP4 (ENSANAG00000020849) PACRGL (ENSANAG00000026655) SLIT2 (ENSANAG00000034275) ENSANAG00000036506 LCORL (ENSANAG00000026998) NCAPG (ENSANAG00000037426) ENSANAG00000004148 DCAF16 (ENSANAG00000003812) FAM184B (ENSANAG00000030525) ENSANAG00000018015 LAP3 (ENSANAG00000026474) CLRN2 (ENSANAG00000037120) ENSANAG00000022597 Tarsier MODERN SPECIES 3414 PPARGC1A (ENSTSYG00000010439) ##22 Strepsirrhini ANCESTRAL SPECIES 46 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Lemuriformes ANCESTRAL SPECIES 62 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00960000191062 Mouse lemur MODERN SPECIES 26 TBC1D19 (ENSMICG00000015879) CCKAR (ENSMICG00000016023) RBPJ (ENSMICG00000016014) SMIM20 (ENSMICG00000017222) SEL1L3 (ENSMICG00000017216) SLC34A2 (ENSMICG00000045359) ENSMICG00000033125 ANAPC4 (ENSMICG00000017188) ZCCHC4 (ENSMICG00000017179) PI4K2B (ENSMICG00000017176) SEPSECS (ENSMICG00000028863) LGI2 (ENSMICG00000002206) CCDC149 (ENSMICG00000017475) DHX15 (ENSMICG00000015414) ENSMICG00000045337 PPARGC1A (ENSMICG00000015390) ##22 GBA3 (ENSMICG00000017466) ADGRA3 (ENSMICG00000003022) ENSMICG00000009425 KCNIP4 (ENSMICG00000035356) PACRGL (ENSMICG00000005651) SLIT2 (ENSMICG00000005622) ENSMICG00000027479 LCORL (ENSMICG00000034656) NCAPG (ENSMICG00000006804) DCAF16 (ENSMICG00000042496) FAM184B (ENSMICG00000006794) MED28 (ENSMICG00000035340) ENSMICG00000006788 CLRN2 (ENSMICG00000039157) QDPR (ENSMICG00000000596) Lemuriformes_a ANCESTRAL SPECIES 192 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 Greater bamboo lemur MODERN SPECIES 685 SLC34A2 (ENSPSMG00000020812) ANAPC4 (ENSPSMG00000020764) ZCCHC4 (ENSPSMG00000020716) PI4K2B (ENSPSMG00000020669) ENSPSMG00000020644 SEPSECS (ENSPSMG00000020631) LGI2 (ENSPSMG00000020605) CCDC149 (ENSPSMG00000020571) SOD3 (ENSPSMG00000020541) DHX15 (ENSPSMG00000020496) PPARGC1A (ENSPSMG00000020422) ##22 GBA3 (ENSPSMG00000020313) ADGRA3 (ENSPSMG00000020306) Coquerels sifaka MODERN SPECIES 979 ENSPCOG00000015580 TBC1D19 (ENSPCOG00000027578) CCKAR (ENSPCOG00000022459) RBPJ (ENSPCOG00000014943) SMIM20 (ENSPCOG00000020751) SEL1L3 (ENSPCOG00000008204) SLC34A2 (ENSPCOG00000001661) ANAPC4 (ENSPCOG00000019322) ZCCHC4 (ENSPCOG00000019530) PI4K2B (ENSPCOG00000025453) SEPSECS (ENSPCOG00000027479) LGI2 (ENSPCOG00000019962) CCDC149 (ENSPCOG00000021677) DHX15 (ENSPCOG00000016858) ENSPCOG00000019130 PPARGC1A (ENSPCOG00000022858) ##22 ENSPCOG00000013452 ADGRA3 (ENSPCOG00000026249) Bushbaby MODERN SPECIES 184 TBC1D19 (ENSOGAG00000008054) CCKAR (ENSOGAG00000028711) RBPJ (ENSOGAG00000007913) SEL1L3 (ENSOGAG00000006417) SLC34A2 (ENSOGAG00000006413) ANAPC4 (ENSOGAG00000002068) ZCCHC4 (ENSOGAG00000002064) PI4K2B (ENSOGAG00000029591) ENSOGAG00000024400 ENSOGAG00000033259 SEPSECS (ENSOGAG00000008524) LGI2 (ENSOGAG00000025923) CCDC149 (ENSOGAG00000007602) ENSOGAG00000029820 ENSOGAG00000007593 PPARGC1A (ENSOGAG00000014559) ##22 GBA3 (ENSOGAG00000004907) ENSOGAG00000034271 ADGRA3 (ENSOGAG00000012841) KCNIP4 (ENSOGAG00000012838) PACRGL (ENSOGAG00000012836) SLIT2 (ENSOGAG00000012831) ENSOGAG00000005593 ENSOGAG00000005585 FAM184B (ENSOGAG00000005580) MED28 (ENSOGAG00000033835) LAP3 (ENSOGAG00000005576) CLRN2 (ENSOGAG00000029063) QDPR (ENSOGAG00000013513) ENSOGAG00000030115 LDB2 (ENSOGAG00000002455) Euarchontoglires_A ANCESTRAL SPECIES 9 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT01040000242873 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00990000204159 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 Glires ANCESTRAL SPECIES 8 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00990000204159 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 Rodentia ANCESTRAL SPECIES 13 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT01010000227024 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 Rodentia_B ANCESTRAL SPECIES 19 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00960000191062 ENSGT00390000010628 Myomorpha ANCESTRAL SPECIES 19 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00960000191062 ENSGT00390000010628 Muroidea ANCESTRAL SPECIES 17 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00960000191062 ENSGT00390000010628 Muroidea_A ANCESTRAL SPECIES 13 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00960000191062 ENSGT00390000010628 Cricetidae ANCESTRAL SPECIES 14 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00960000191062 ENSGT00390000010628 Cricetinae ANCESTRAL SPECIES 9 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00960000191062 ENSGT00390000010628 Chinese hamster chok1gshd MODERN SPECIES 44 Cckar (ENSCGRG00001015331) Rbpj (ENSCGRG00001016640) ENSCGRG00001010832 Smim20 (ENSCGRG00001010352) Sel1l3 (ENSCGRG00001023792) Slc34a2 (ENSCGRG00001019379) Anapc4 (ENSCGRG00001021562) ENSCGRG00001016709 Zcchc4 (ENSCGRG00001014205) Pi4k2b (ENSCGRG00001005696) Sepsecs (ENSCGRG00001023389) Lgi2 (ENSCGRG00001010617) Ccdc149 (ENSCGRG00001001092) Sod3 (ENSCGRG00001009531) Dhx15 (ENSCGRG00001023527) Ppargc1a (ENSCGRG00001015534) ##22 ENSCGRG00001005713 ENSCGRG00001004741 Adgra3 (ENSCGRG00001023189) Kcnip4 (ENSCGRG00001018947) 5730480H06Rik (ENSCGRG00001006394) Slit2 (ENSCGRG00001021922) ENSCGRG00001020697 ENSCGRG00001020289 ENSCGRG00001011448 ENSCGRG00001007598 Ncapg (ENSCGRG00001013905) Fam184b (ENSCGRG00001011119) ENSCGRG00001021780 Lap3 (ENSCGRG00001017729) Clrn2 (ENSCGRG00001000075) Golden Hamster MODERN SPECIES 632 Stim2 (ENSMAUG00000018372) Tbc1d19 (ENSMAUG00000018698) Cckar (ENSMAUG00000020673) Rbpj (ENSMAUG00000020612) Smim20 (ENSMAUG00000016115) Sel1l3 (ENSMAUG00000009548) Slc34a2 (ENSMAUG00000016072) Anapc4 (ENSMAUG00000015911) Zcchc4 (ENSMAUG00000017115) Pi4k2b (ENSMAUG00000015492) Sepsecs (ENSMAUG00000002352) Lgi2 (ENSMAUG00000020219) Ccdc149 (ENSMAUG00000001813) Dhx15 (ENSMAUG00000011535) Ppargc1a (ENSMAUG00000011811) ##22 ENSMAUG00000006861 ENSMAUG00000007935 Adgra3 (ENSMAUG00000012066) ENSMAUG00000007284 Kcnip4 (ENSMAUG00000020538) 5730480H06Rik (ENSMAUG00000000592) Slit2 (ENSMAUG00000011068) ENSMAUG00000019848 Ncapg (ENSMAUG00000007532) Fam184b (ENSMAUG00000021123) ENSMAUG00000008581 Lap3 (ENSMAUG00000014239) ENSMAUG00000013013 Ldb2 (ENSMAUG00000019898) Tapt1 (ENSMAUG00000020047) Cricetidae_B ANCESTRAL SPECIES 9 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b Northern American deer mouse MODERN SPECIES 1 Tbc1d19 (ENSPEMG00000010326) Cckar (ENSPEMG00000025192) Rbpj (ENSPEMG00000010386) Smim20 (ENSPEMG00000030098) Sel1l3 (ENSPEMG00000020373) Slc34a2 (ENSPEMG00000007479) Anapc4 (ENSPEMG00000014070) ENSPEMG00000029080 Zcchc4 (ENSPEMG00000013522) Pi4k2b (ENSPEMG00000007793) Sepsecs (ENSPEMG00000006742) Lgi2 (ENSPEMG00000011026) Ccdc149 (ENSPEMG00000012229) Sod3 (ENSPEMG00000028688) Dhx15 (ENSPEMG00000012226) Ppargc1a (ENSPEMG00000010892) ##22 ENSPEMG00000009892 Adgra3 (ENSPEMG00000017979) ENSPEMG00000025724 Kcnip4 (ENSPEMG00000000713) 5730480H06Rik (ENSPEMG00000015581) Slit2 (ENSPEMG00000001202) ENSPEMG00000021270 Ncapg (ENSPEMG00000020612) Fam184b (ENSPEMG00000021704) ENSPEMG00000030352 Lap3 (ENSPEMG00000020769) Clrn2 (ENSPEMG00000020731) Qdpr (ENSPEMG00000020868) Ldb2 (ENSPEMG00000020695) ENSPEMG00000001976 Prairie vole MODERN SPECIES 88 Lgi2 (ENSMOCG00000003214) Ccdc149 (ENSMOCG00000022653) Sod3 (ENSMOCG00000010088) Dhx15 (ENSMOCG00000003474) Ppargc1a (ENSMOCG00000008765) ##22 ENSMOCG00000016793 Adgra3 (ENSMOCG00000015234) Kcnip4 (ENSMOCG00000010621) 5730480H06Rik (ENSMOCG00000020867) Slit2 (ENSMOCG00000012614) ENSMOCG00000020963 ENSMOCG00000004853 ENSMOCG00000006778 Ncapg (ENSMOCG00000016519) Fam184b (ENSMOCG00000006017) Med28 (ENSMOCG00000021857) Lap3 (ENSMOCG00000018206) Clrn2 (ENSMOCG00000000341) Qdpr (ENSMOCG00000020517) Ldb2 (ENSMOCG00000000590) Murinae ANCESTRAL SPECIES 12 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT01100000263511.b.a.b.a.a ENSGT01100000263543.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 Mus ANCESTRAL SPECIES 14 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.b Mus_A ANCESTRAL SPECIES 6 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b Mus_B ANCESTRAL SPECIES 4 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b Mouse MODERN SPECIES 14 Stim2 (ENSMUSG00000039156) Tbc1d19 (ENSMUSG00000039178) Cckar (ENSMUSG00000029193) Rbpj (ENSMUSG00000039191) Smim20 (ENSMUSG00000061461) Sel1l3 (ENSMUSG00000029189) Slc34a2 (ENSMUSG00000029188) Anapc4 (ENSMUSG00000029176) Zcchc4 (ENSMUSG00000029179) Pi4k2b (ENSMUSG00000029186) Sepsecs (ENSMUSG00000029173) Lgi2 (ENSMUSG00000039252) Ccdc149 (ENSMUSG00000045790) Sod3 (ENSMUSG00000072941) Dhx15 (ENSMUSG00000029169) Ppargc1a (ENSMUSG00000029167) ##22 Adgra3 (ENSMUSG00000029090) Kcnip4 (ENSMUSG00000029088) 5730480H06Rik (ENSMUSG00000029089) Slit2 (ENSMUSG00000031558) Lcorl (ENSMUSG00000015882) Ncapg (ENSMUSG00000015880) Fam184b (ENSMUSG00000015879) Med28 (ENSMUSG00000015804) Lap3 (ENSMUSG00000039682) Clrn2 (ENSMUSG00000049530) Qdpr (ENSMUSG00000015806) Ldb2 (ENSMUSG00000039706) Tapt1 (ENSMUSG00000046985) Prom1 (ENSMUSG00000029086) Fgfbp1 (ENSMUSG00000048373) Mus_C ANCESTRAL SPECIES 4 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b Steppe mouse MODERN SPECIES 2887 Ppargc1a (ENSMSIG00000019989) ##22 ENSMSIG00000019964 spretus MODERN SPECIES 14 Stim2 (MGP_SPRETEiJ_G0028223) Tbc1d19 (MGP_SPRETEiJ_G0028222) Cckar (MGP_SPRETEiJ_G0028221) MGP_SPRETEiJ_G0028220 Smim20 (MGP_SPRETEiJ_G0028219) Sel1l3 (MGP_SPRETEiJ_G0028218) Slc34a2 (MGP_SPRETEiJ_G0028217) Anapc4 (MGP_SPRETEiJ_G0028216) Zcchc4 (MGP_SPRETEiJ_G0028215) Pi4k2b (MGP_SPRETEiJ_G0028214) Sepsecs (MGP_SPRETEiJ_G0028213) Lgi2 (MGP_SPRETEiJ_G0028212) Ccdc149 (MGP_SPRETEiJ_G0028211) Sod3 (MGP_SPRETEiJ_G0028210) Dhx15 (MGP_SPRETEiJ_G0028209) Ppargc1a (MGP_SPRETEiJ_G0028208) ##22 Adgra3 (MGP_SPRETEiJ_G0028207) Kcnip4 (MGP_SPRETEiJ_G0028206) 5730480H06Rik (MGP_SPRETEiJ_G0028205) Slit2 (MGP_SPRETEiJ_G0028204) MGP_SPRETEiJ_G0028203 Ncapg (MGP_SPRETEiJ_G0028202) Fam184b (MGP_SPRETEiJ_G0028201) Med28 (MGP_SPRETEiJ_G0028200) Lap3 (MGP_SPRETEiJ_G0028199) Clrn2 (MGP_SPRETEiJ_G0028198) Qdpr (MGP_SPRETEiJ_G0028197) Ldb2 (MGP_SPRETEiJ_G0028196) Tapt1 (MGP_SPRETEiJ_G0028195) Prom1 (MGP_SPRETEiJ_G0028194) Fgfbp1 (MGP_SPRETEiJ_G0028193) Ryukyu mouse MODERN SPECIES 14 Stim2 (MGP_CAROLIEiJ_G0027228) Tbc1d19 (MGP_CAROLIEiJ_G0027227) Cckar (MGP_CAROLIEiJ_G0027226) MGP_CAROLIEiJ_G0027225 Smim20 (MGP_CAROLIEiJ_G0027224) Sel1l3 (MGP_CAROLIEiJ_G0027223) Slc34a2 (MGP_CAROLIEiJ_G0027222) Anapc4 (MGP_CAROLIEiJ_G0027221) Zcchc4 (MGP_CAROLIEiJ_G0027220) Pi4k2b (MGP_CAROLIEiJ_G0027219) Sepsecs (MGP_CAROLIEiJ_G0027218) Lgi2 (MGP_CAROLIEiJ_G0027217) Ccdc149 (MGP_CAROLIEiJ_G0027216) Sod3 (MGP_CAROLIEiJ_G0027215) Dhx15 (MGP_CAROLIEiJ_G0027214) Ppargc1a (MGP_CAROLIEiJ_G0027213) ##22 Adgra3 (MGP_CAROLIEiJ_G0027212) MGP_CAROLIEiJ_G0027211 Kcnip4 (MGP_CAROLIEiJ_G0027210) 5730480H06Rik (MGP_CAROLIEiJ_G0027209) Slit2 (MGP_CAROLIEiJ_G0027208) MGP_CAROLIEiJ_G0027207 Ncapg (MGP_CAROLIEiJ_G0027206) Fam184b (MGP_CAROLIEiJ_G0027205) Med28 (MGP_CAROLIEiJ_G0027204) Lap3 (MGP_CAROLIEiJ_G0027203) Clrn2 (MGP_CAROLIEiJ_G0027202) Qdpr (MGP_CAROLIEiJ_G0027201) Ldb2 (MGP_CAROLIEiJ_G0027200) Tapt1 (MGP_CAROLIEiJ_G0027199) Prom1 (MGP_CAROLIEiJ_G0027198) Shrew mouse MODERN SPECIES 4 Stim2 (MGP_PahariEiJ_G0017010) Tbc1d19 (MGP_PahariEiJ_G0017009) Cckar (MGP_PahariEiJ_G0017008) Rbpj (MGP_PahariEiJ_G0017007) Smim20 (MGP_PahariEiJ_G0017006) Sel1l3 (MGP_PahariEiJ_G0017005) Slc34a2 (MGP_PahariEiJ_G0017004) Anapc4 (MGP_PahariEiJ_G0017003) Zcchc4 (MGP_PahariEiJ_G0017002) Pi4k2b (MGP_PahariEiJ_G0017001) Sepsecs (MGP_PahariEiJ_G0017000) Lgi2 (MGP_PahariEiJ_G0016999) Ccdc149 (MGP_PahariEiJ_G0016998) Sod3 (MGP_PahariEiJ_G0016997) Dhx15 (MGP_PahariEiJ_G0016996) Ppargc1a (MGP_PahariEiJ_G0016995) ##22 Adgra3 (MGP_PahariEiJ_G0016994) MGP_PahariEiJ_G0016993 Kcnip4 (MGP_PahariEiJ_G0016992) 5730480H06Rik (MGP_PahariEiJ_G0016991) Slit2 (MGP_PahariEiJ_G0016990) MGP_PahariEiJ_G0016989 Ncapg (MGP_PahariEiJ_G0016988) Fam184b (MGP_PahariEiJ_G0016987) Med28 (MGP_PahariEiJ_G0016986) Lap3 (MGP_PahariEiJ_G0016985) Clrn2 (MGP_PahariEiJ_G0016984) Qdpr (MGP_PahariEiJ_G0016983) Ldb2 (MGP_PahariEiJ_G0016982) Tapt1 (MGP_PahariEiJ_G0016981) Prom1 (MGP_PahariEiJ_G0016980) Rat MODERN SPECIES 5 Cckar (ENSRNOG00000043124) Rbpj (ENSRNOG00000046327) LOC100361259 (ENSRNOG00000055911) AABR07015507.1 (ENSRNOG00000051190) Sel1l3 (ENSRNOG00000004932) Slc34a2 (ENSRNOG00000004626) Anapc4 (ENSRNOG00000004130) Zcchc4 (ENSRNOG00000029064) Pi4k2b (ENSRNOG00000003924) Sepsecs (ENSRNOG00000049244) Lgi2 (ENSRNOG00000066201) Ccdc149 (ENSRNOG00000024454) ENSRNOG00000064588 Sod3 (ENSRNOG00000003869) Dhx15 (ENSRNOG00000003844) Ppargc1a (ENSRNOG00000004473) ##22 ENSRNOG00000067137 AABR07015559.1 (ENSRNOG00000055015) Hmgn1-ps6 (ENSRNOG00000069654) Gba3 (ENSRNOG00000024634) Adgra3 (ENSRNOG00000004279) Ifitm3-ps1 (ENSRNOG00000048944) Kcnip4 (ENSRNOG00000032350) Pacrgl (ENSRNOG00000004140) Slit2 (ENSRNOG00000003840) ENSRNOG00000068270 Lcorl (ENSRNOG00000003787) Ncapg (ENSRNOG00000038572) Fam184b (ENSRNOG00000003704) Med28 (ENSRNOG00000003592) Lap3 (ENSRNOG00000003289) Upper Galilee mountains blind mole rat MODERN SPECIES 986 Cckar (ENSNGAG00000021342) ENSNGAG00000021067 Rbpj (ENSNGAG00000013338) Smim20 (ENSNGAG00000009723) Sel1l3 (ENSNGAG00000008965) Slc34a2 (ENSNGAG00000000788) ENSNGAG00000019141 ENSNGAG00000018886 Zcchc4 (ENSNGAG00000015745) Pi4k2b (ENSNGAG00000001252) Sepsecs (ENSNGAG00000000721) Lgi2 (ENSNGAG00000018556) Ccdc149 (ENSNGAG00000017784) Sod3 (ENSNGAG00000017105) Dhx15 (ENSNGAG00000016196) Ppargc1a (ENSNGAG00000015090) ##22 ENSNGAG00000014375 Adgra3 (ENSNGAG00000012199) Lesser Egyptian jerboa MODERN SPECIES 58 Tbc1d19 (ENSJJAG00000015623) Cckar (ENSJJAG00000009819) Rbpj (ENSJJAG00000024408) Smim20 (ENSJJAG00000020734) Sel1l3 (ENSJJAG00000018980) Slc34a2 (ENSJJAG00000023515) ENSJJAG00000023054 Zcchc4 (ENSJJAG00000016627) Pi4k2b (ENSJJAG00000021578) Sepsecs (ENSJJAG00000001251) Lgi2 (ENSJJAG00000021018) Ccdc149 (ENSJJAG00000016740) Sod3 (ENSJJAG00000019475) ENSJJAG00000010774 Dhx15 (ENSJJAG00000010364) ENSJJAG00000018377 ##22 ENSJJAG00000023479 Adgra3 (ENSJJAG00000000786) Kcnip4 (ENSJJAG00000016294) ENSJJAG00000008981 ENSJJAG00000020450 Slit2 (ENSJJAG00000018613) ENSJJAG00000017549 ENSJJAG00000017097 ENSJJAG00000020247 Ncapg (ENSJJAG00000023233) Fam184b (ENSJJAG00000014582) ENSJJAG00000022052 Lap3 (ENSJJAG00000016507) Clrn2 (ENSJJAG00000010634) Qdpr (ENSJJAG00000019964) Kangaroo rat MODERN SPECIES 327 ENSDORG00000028755 Stim2 (ENSDORG00000016610) Tbc1d19 (ENSDORG00000013790) Cckar (ENSDORG00000006353) Rbpj (ENSDORG00000006352) Smim20 (ENSDORG00000028531) Sel1l3 (ENSDORG00000011773) Slc34a2 (ENSDORG00000016105) ENSDORG00000025086 ENSDORG00000012901 Pi4k2b (ENSDORG00000000491) Sepsecs (ENSDORG00000012655) Lgi2 (ENSDORG00000005632) Ccdc149 (ENSDORG00000005628) Dhx15 (ENSDORG00000013848) Ppargc1a (ENSDORG00000016276) ##22 ENSDORG00000011391 Adgra3 (ENSDORG00000007520) ENSDORG00000024508 Kcnip4 (ENSDORG00000015626) 5730480H06Rik (ENSDORG00000015625) Slit2 (ENSDORG00000000584) ENSDORG00000025331 Ncapg (ENSDORG00000013096) ENSDORG00000028180 ENSDORG00000029831 Lap3 (ENSDORG00000008040) Clrn2 (ENSDORG00000008037) Qdpr (ENSDORG00000008034) Ldb2 (ENSDORG00000010160) Tapt1 (ENSDORG00000010543) Rodentia_A ANCESTRAL SPECIES 20 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT01010000227024 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 Hystricomorpha ANCESTRAL SPECIES 26 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Hystricomorpha_a ANCESTRAL SPECIES 23 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Hystricomorpha_b ANCESTRAL SPECIES 37 ENSGT00940000157221 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Degu MODERN SPECIES 47 ENSODEG00000008773 TBC1D19 (ENSODEG00000007019) CCKAR (ENSODEG00000007359) ENSODEG00000007277 ENSODEG00000007321 SEL1L3 (ENSODEG00000008196) SLC34A2 (ENSODEG00000010839) ENSODEG00000019525 ENSODEG00000006972 ENSODEG00000007449 PI4K2B (ENSODEG00000008999) SEPSECS (ENSODEG00000010607) LGI2 (ENSODEG00000009206) ENSODEG00000008421 ENSODEG00000008891 ENSODEG00000008409 ##22 GBA3 (ENSODEG00000007983) ADGRA3 (ENSODEG00000008912) KCNIP4 (ENSODEG00000009132) ENSODEG00000009142 SLIT2 (ENSODEG00000011554) ENSODEG00000007550 ENSODEG00000007625 NCAPG (ENSODEG00000007988) FAM184B (ENSODEG00000008017) MED28 (ENSODEG00000010235) ENSODEG00000008724 CLRN2 (ENSODEG00000009531) QDPR (ENSODEG00000009810) LDB2 (ENSODEG00000010335) TAPT1 (ENSODEG00000007601) Long-tailed chinchilla MODERN SPECIES 187 LGI2 (ENSCLAG00000001203) CCDC149 (ENSCLAG00000000982) ENSCLAG00000017465 DHX15 (ENSCLAG00000000508) PPARGC1A (ENSCLAG00000002058) ##22 GBA3 (ENSCLAG00000002378) ADGRA3 (ENSCLAG00000001094) KCNIP4 (ENSCLAG00000001455) PACRGL (ENSCLAG00000001007) SLIT2 (ENSCLAG00000001413) ENSCLAG00000002042 LCORL (ENSCLAG00000002297) NCAPG (ENSCLAG00000000689) FAM184B (ENSCLAG00000000877) MED28 (ENSCLAG00000000626) LAP3 (ENSCLAG00000000942) CLRN2 (ENSCLAG00000001024) QDPR (ENSCLAG00000000873) LDB2 (ENSCLAG00000001146) TAPT1 (ENSCLAG00000000811) Guinea pig MODERN SPECIES 50 TBC1D19 (ENSCPOG00000003940) CCKAR (ENSCPOG00000007046) RBPJ (ENSCPOG00000007041) ENSCPOG00000040682 SMIM20 (ENSCPOG00000007684) SEL1L3 (ENSCPOG00000001037) SLC34A2 (ENSCPOG00000024165) ANAPC4 (ENSCPOG00000013122) ZCCHC4 (ENSCPOG00000011477) PI4K2B (ENSCPOG00000015398) SEPSECS (ENSCPOG00000035974) LGI2 (ENSCPOG00000024161) CCDC149 (ENSCPOG00000008895) SOD3 (ENSCPOG00000035072) DHX15 (ENSCPOG00000006467) PPARGC1A (ENSCPOG00000001518) ##22 GBA3 (ENSCPOG00000024273) ADGRA3 (ENSCPOG00000014179) KCNIP4 (ENSCPOG00000038077) ENSCPOG00000039330 Naked mole-rat female MODERN SPECIES 1 RBPJ (ENSHGLG00000010901) ENSHGLG00000048407 ENSHGLG00000042802 SEL1L3 (ENSHGLG00000011887) SLC34A2 (ENSHGLG00000012163) ANAPC4 (ENSHGLG00000004987) ENSHGLG00000039602 ZCCHC4 (ENSHGLG00000005154) PI4K2B (ENSHGLG00000005194) SEPSECS (ENSHGLG00000005236) ENSHGLG00000031983 LGI2 (ENSHGLG00000034196) CCDC149 (ENSHGLG00000045906) SOD3 (ENSHGLG00000047646) DHX15 (ENSHGLG00000006630) PPARGC1A (ENSHGLG00000007022) ##22 ENSHGLG00000041210 ENSHGLG00000046378 ENSHGLG00000008324 ADGRA3 (ENSHGLG00000008661) KCNIP4 (ENSHGLG00000009003) ENSHGLG00000009348 ENSHGLG00000042478 PACRGL (ENSHGLG00000049060) SLIT2 (ENSHGLG00000010533) ENSHGLG00000003986 LCORL (ENSHGLG00000004100) NCAPG (ENSHGLG00000004282) FAM184B (ENSHGLG00000004352) ENSHGLG00000004397 MED28 (ENSHGLG00000042367) Sciuridae ANCESTRAL SPECIES 19 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00390000001577 ENSGT01010000227024 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Marmotini ANCESTRAL SPECIES 26 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800.e ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT01010000227024 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Alpin marmot MODERN SPECIES 9 ENSMMMG00000017503 STIM2 (ENSMMMG00000017470) CCKAR (ENSMMMG00000017438) RBPJ (ENSMMMG00000017407) SMIM20 (ENSMMMG00000017386) SEL1L3 (ENSMMMG00000017356) SLC34A2 (ENSMMMG00000017344) ANAPC4 (ENSMMMG00000017319) ZCCHC4 (ENSMMMG00000017301) PI4K2B (ENSMMMG00000017289) SEPSECS (ENSMMMG00000017270) LGI2 (ENSMMMG00000017262) CCDC149 (ENSMMMG00000017248) DHX15 (ENSMMMG00000017227) ENSMMMG00000017220 PPARGC1A (ENSMMMG00000017190) ##22 GBA3 (ENSMMMG00000017174) ADGRA3 (ENSMMMG00000017146) KCNIP4 (ENSMMMG00000017078) PACRGL (ENSMMMG00000017055) SLIT2 (ENSMMMG00000016769) ENSMMMG00000016741 ENSMMMG00000016736 ENSMMMG00000016717 NCAPG (ENSMMMG00000016692) ENSMMMG00000016689 DCAF16 (ENSMMMG00000016681) FAM184B (ENSMMMG00000016657) ENSMMMG00000016639 LAP3 (ENSMMMG00000016620) CLRN2 (ENSMMMG00000016613) Marmotini_b ANCESTRAL SPECIES 33 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a.b ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b.g ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800.e ENSGT00900000143693 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000155725 ENSGT00730000111419 ENSGT00940000162414 ENSGT00390000001577 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192.t ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 Arctic ground squirrel MODERN SPECIES 9 TBC1D19 (ENSUPAG00010018475) CCKAR (ENSUPAG00010018463) RBPJ (ENSUPAG00010018415) SMIM20 (ENSUPAG00010018408) SEL1L3 (ENSUPAG00010018378) ENSUPAG00010018366 ANAPC4 (ENSUPAG00010018324) ZCCHC4 (ENSUPAG00010018312) PI4K2B (ENSUPAG00010018304) SEPSECS (ENSUPAG00010018289) LGI2 (ENSUPAG00010018269) CCDC149 (ENSUPAG00010018257) SOD3 (ENSUPAG00010018252) DHX15 (ENSUPAG00010018237) ENSUPAG00010018232 PPARGC1A (ENSUPAG00010018212) ##22 GBA3 (ENSUPAG00010018197) ADGRA3 (ENSUPAG00010018174) KCNIP4 (ENSUPAG00010017944) PACRGL (ENSUPAG00010017902) SLIT2 (ENSUPAG00010017541) ENSUPAG00010017517 ENSUPAG00010017493 DCAF16 (ENSUPAG00010017485) NCAPG (ENSUPAG00010017444) FAM184B (ENSUPAG00010017393) ENSUPAG00010017366 LAP3 (ENSUPAG00010017358) CLRN2 (ENSUPAG00010017347) QDPR (ENSUPAG00010017321) LDB2 (ENSUPAG00010017297) Squirrel MODERN SPECIES 77 STIM2 (ENSSTOG00000014072) TBC1D19 (ENSSTOG00000024301) CCKAR (ENSSTOG00000028796) RBPJ (ENSSTOG00000004547) SMIM20 (ENSSTOG00000004810) SEL1L3 (ENSSTOG00000010415) SLC34A2 (ENSSTOG00000012971) ANAPC4 (ENSSTOG00000016156) ZCCHC4 (ENSSTOG00000023603) PI4K2B (ENSSTOG00000016146) SEPSECS (ENSSTOG00000013399) LGI2 (ENSSTOG00000002210) ENSSTOG00000025245 ENSSTOG00000015000 PPARGC1A (ENSSTOG00000012522) ##22 GBA3 (ENSSTOG00000030967) ADGRA3 (ENSSTOG00000008272) KCNIP4 (ENSSTOG00000014315) PACRGL (ENSSTOG00000014307) SLIT2 (ENSSTOG00000009778) ENSSTOG00000030554 LCORL (ENSSTOG00000000960) NCAPG (ENSSTOG00000023744) DCAF16 (ENSSTOG00000000944) FAM184B (ENSSTOG00000000931) ENSSTOG00000000930 LAP3 (ENSSTOG00000000922) CLRN2 (ENSSTOG00000009920) QDPR (ENSSTOG00000009916) ENSSTOG00000034519 Eurasian red squirrel MODERN SPECIES 18 ENSSVLG00005011823 TBC1D19 (ENSSVLG00005011905) CCKAR (ENSSVLG00005012173) RBPJ (ENSSVLG00005012303) SMIM20 (ENSSVLG00005012667) SEL1L3 (ENSSVLG00005012722) SLC34A2 (ENSSVLG00005013163) ANAPC4 (ENSSVLG00005013305) ZCCHC4 (ENSSVLG00005013382) ENSSVLG00005013482 SEPSECS (ENSSVLG00005013560) LGI2 (ENSSVLG00005013643) CCDC149 (ENSSVLG00005013936) SOD3 (ENSSVLG00005014382) ENSSVLG00005014421 PPARGC1A (ENSSVLG00005014549) ##22 GBA3 (ENSSVLG00005014999) ADGRA3 (ENSSVLG00005015123) KCNIP4 (ENSSVLG00005015491) PACRGL (ENSSVLG00005016040) SLIT2 (ENSSVLG00005016302) ENSSVLG00005017689 LCORL (ENSSVLG00005017781) NCAPG (ENSSVLG00005018065) DCAF16 (ENSSVLG00005018117) ENSSVLG00005018135 FAM184B (ENSSVLG00005018162) ENSSVLG00005018337 LAP3 (ENSSVLG00005018397) CLRN2 (ENSSVLG00005018469) QDPR (ENSSVLG00005018520) Lagomorpha ANCESTRAL SPECIES 3 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00990000204159 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000010628 Rabbit MODERN SPECIES 11 TBC1D19 (ENSOCUG00000013465) CCKAR (ENSOCUG00000013457) RBPJ (ENSOCUG00000013449) SMIM20 (ENSOCUG00000034394) SEL1L3 (ENSOCUG00000017195) SLC34A2 (ENSOCUG00000002944) ANAPC4 (ENSOCUG00000016004) ZCCHC4 (ENSOCUG00000015990) PI4K2B (ENSOCUG00000015972) SEPSECS (ENSOCUG00000008262) LGI2 (ENSOCUG00000004764) CCDC149 (ENSOCUG00000007463) ENSOCUG00000007460 ENSOCUG00000019163 DHX15 (ENSOCUG00000003026) PPARGC1A (ENSOCUG00000014668) ##22 GBA3 (ENSOCUG00000005568) ENSOCUG00000000919 ENSOCUG00000035389 ENSOCUG00000038173 ENSOCUG00000010595 KCNIP4 (ENSOCUG00000002189) ENSOCUG00000002186 SLIT2 (ENSOCUG00000009517) LCORL (ENSOCUG00000006802) NCAPG (ENSOCUG00000006792) ENSOCUG00000033408 DCAF16 (ENSOCUG00000021289) FAM184B (ENSOCUG00000001582) ENSOCUG00000001576 LAP3 (ENSOCUG00000001571) Pika MODERN SPECIES 188 PPARGC1A (ENSOPRG00000012899) ##22 Tree shrew MODERN SPECIES 320 PPARGC1A (ENSTBEG00000005147) ##22 Atlantogenata ANCESTRAL SPECIES 46 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139.b ENSGT00940000162414 ENSGT00390000001577 ENSGT00390000012430 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Xenarthra ANCESTRAL SPECIES 385 ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 Armadillo MODERN SPECIES 1850 RBPJ (ENSDNOG00000035383) ENSDNOG00000043501 ENSDNOG00000043946 SEL1L3 (ENSDNOG00000004313) ENSDNOG00000039515 SLC34A2 (ENSDNOG00000032564) ENSDNOG00000032662 ANAPC4 (ENSDNOG00000032226) ZCCHC4 (ENSDNOG00000004525) PI4K2B (ENSDNOG00000044369) SEPSECS (ENSDNOG00000049494) LGI2 (ENSDNOG00000037791) CCDC149 (ENSDNOG00000038755) SOD3 (ENSDNOG00000024793) DHX15 (ENSDNOG00000014438) PPARGC1A (ENSDNOG00000041106) ##22 Sloth MODERN SPECIES 990 PPARGC1A (ENSCHOG00000000367) ##22 Afrotheria ANCESTRAL SPECIES 53 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b Afrotheria_a ANCESTRAL SPECIES 50 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.a.a.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b Elephant MODERN SPECIES 164 TBC1D19 (ENSLAFG00000009636) CCKAR (ENSLAFG00000000294) RBPJ (ENSLAFG00000000410) ENSLAFG00000007091 SEL1L3 (ENSLAFG00000012362) ENSLAFG00000013325 ENSLAFG00000026426 ANAPC4 (ENSLAFG00000012242) ZCCHC4 (ENSLAFG00000012234) PI4K2B (ENSLAFG00000012228) SEPSECS (ENSLAFG00000010804) LGI2 (ENSLAFG00000002475) CCDC149 (ENSLAFG00000007108) SOD3 (ENSLAFG00000022899) DHX15 (ENSLAFG00000005466) PPARGC1A (ENSLAFG00000012981) ##22 ENSLAFG00000030988 GBA3 (ENSLAFG00000029577) ADGRA3 (ENSLAFG00000003897) KCNIP4 (ENSLAFG00000005792) PACRGL (ENSLAFG00000005786) SLIT2 (ENSLAFG00000017738) ENSLAFG00000009691 NCAPG (ENSLAFG00000009686) FAM184B (ENSLAFG00000015420) MED28 (ENSLAFG00000016936) LAP3 (ENSLAFG00000016929) CLRN2 (ENSLAFG00000016844) QDPR (ENSLAFG00000004518) LDB2 (ENSLAFG00000000552) ENSLAFG00000028231 Hyrax MODERN SPECIES 9969 PPARGC1A (ENSPCAG00000016308) ##22 Tenrec MODERN SPECIES 1211 PPARGC1A (ENSETEG00000018091) ##22 Platypus MODERN SPECIES 9 STIM2 (ENSOANG00000006701) TBC1D19 (ENSOANG00000006700) CCKAR (ENSOANG00000029819) RBPJ (ENSOANG00000006699) ENSOANG00000037572 SEL1L3 (ENSOANG00000006697) SLC34A2 (ENSOANG00000006695) ANAPC4 (ENSOANG00000006689) ZCCHC4 (ENSOANG00000006688) PI4K2B (ENSOANG00000006681) SEPSECS (ENSOANG00000045251) LGI2 (ENSOANG00000041994) CCDC149 (ENSOANG00000006683) ENSOANG00000038598 DHX15 (ENSOANG00000006682) PPARGC1A (ENSOANG00000006680) ##22 GBA3 (ENSOANG00000006679) ADGRA3 (ENSOANG00000006677) KCNIP4 (ENSOANG00000006672) ENSOANG00000006671 SLIT2 (ENSOANG00000006668) ENSOANG00000006667 NCAPG (ENSOANG00000006664) ENSOANG00000006663 MED28 (ENSOANG00000047599) LAP3 (ENSOANG00000006661) CLRN2 (ENSOANG00000039129) DEPDC1 (ENSOANG00000006658) RPE65 (ENSOANG00000006656) WLS (ENSOANG00000007764) DIRAS2 (ENSOANG00000042492) Sauria ANCESTRAL SPECIES 6 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00940000177623 ENSGT00980000201267 ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Archelosauria ANCESTRAL SPECIES 4 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00980000201267 ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Archosauria ANCESTRAL SPECIES 1 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00980000201267 ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Aves ANCESTRAL SPECIES 3 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00980000201267 ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Neognathae ANCESTRAL SPECIES 5 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00980000201267 ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Galloanserae ANCESTRAL SPECIES 5 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Anatidae ANCESTRAL SPECIES 2 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b ENSGT00940000154372.a.a Duck MODERN SPECIES 22 TBC1D19 (ENSAPLG00000007019) CCKAR (ENSAPLG00000025740) ENSAPLG00000020697 RBPJ (ENSAPLG00000007512) SMIM20 (ENSAPLG00000026829) SEL1L3 (ENSAPLG00000007928) ENSAPLG00000008254 ENSAPLG00000016667 ZCCHC4 (ENSAPLG00000009717) PI4K2B (ENSAPLG00000009723) SEPSECS (ENSAPLG00000009962) LGI2 (ENSAPLG00000019636) CCDC149 (ENSAPLG00000010671) SOD3 (ENSAPLG00000001811) DHX15 (ENSAPLG00000005889) PPARGC1A (ENSAPLG00000005303) ##22 ADGRA3 (ENSAPLG00000009086) KCNIP4 (ENSAPLG00000009534) PACRGL (ENSAPLG00000009745) SLIT2 (ENSAPLG00000009781) ENSAPLG00000024706 ENSAPLG00000006384 NCAPG (ENSAPLG00000006687) FAM184B (ENSAPLG00000007157) MED28 (ENSAPLG00000007405) LAP3 (ENSAPLG00000007431) CLRN2 (ENSAPLG00000007712) QDPR (ENSAPLG00000007721) LDB2 (ENSAPLG00000007630) TAPT1 (ENSAPLG00000007389) PROM1 (ENSAPLG00000006442) Pink-footed goose MODERN SPECIES 57 CCKAR (ENSABRG00000015392) RBPJ (ENSABRG00000015380) ENSABRG00000015367 SEL1L3 (ENSABRG00000015358) ENSABRG00000015346 ANAPC4 (ENSABRG00000014877) ZCCHC4 (ENSABRG00000014832) PI4K2B (ENSABRG00000014824) SEPSECS (ENSABRG00000014796) LGI2 (ENSABRG00000014793) CCDC149 (ENSABRG00000014788) SOD3 (ENSABRG00000014787) DHX15 (ENSABRG00000014781) PPARGC1A (ENSABRG00000014767) ##22 ENSABRG00000014762 ADGRA3 (ENSABRG00000014750) KCNIP4 (ENSABRG00000014740) PACRGL (ENSABRG00000014727) SLIT2 (ENSABRG00000014700) LCORL (ENSABRG00000014672) NCAPG (ENSABRG00000014658) FAM184B (ENSABRG00000014647) MED28 (ENSABRG00000014643) LAP3 (ENSABRG00000014639) CLRN2 (ENSABRG00000014636) QDPR (ENSABRG00000014631) LDB2 (ENSABRG00000014613) TAPT1 (ENSABRG00000014605) PROM1 (ENSABRG00000014568) Phasianidae ANCESTRAL SPECIES 2 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Phasianidae_b ANCESTRAL SPECIES 4 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a.a ENSGT00530000063669.a.b ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Turkey MODERN SPECIES 24 STIM2 (ENSMGAG00000012398) TBC1D19 (ENSMGAG00000012405) CCKAR (ENSMGAG00000012415) RBPJ (ENSMGAG00000012418) SMIM20 (ENSMGAG00000018966) SEL1L3 (ENSMGAG00000012431) ENSMGAG00000012440 ANAPC4 (ENSMGAG00000012445) ZCCHC4 (ENSMGAG00000012455) PI4K2B (ENSMGAG00000012457) SEPSECS (ENSMGAG00000012465) LGI2 (ENSMGAG00000012466) CCDC149 (ENSMGAG00000012469) SOD3 (ENSMGAG00000012473) DHX15 (ENSMGAG00000012477) PPARGC1A (ENSMGAG00000012485) ##22 ADGRA3 (ENSMGAG00000012495) KCNIP4 (ENSMGAG00000012506) PACRGL (ENSMGAG00000012511) SLIT2 (ENSMGAG00000012515) ENSMGAG00000017819 ENSMGAG00000022532 ENSMGAG00000007141 ENSMGAG00000021486 ENSMGAG00000012554 LCORL (ENSMGAG00000018531) NCAPG (ENSMGAG00000012563) FAM184B (ENSMGAG00000012574) LAP3 (ENSMGAG00000012582) CLRN2 (ENSMGAG00000012587) QDPR (ENSMGAG00000012588) Chicken MODERN SPECIES 33 TBC1D19 (ENSGALG00010010722) CCKAR (ENSGALG00010010732) RBPJ (ENSGALG00010010837) SMIM20 (ENSGALG00010010853) SEL1L3 (ENSGALG00010010857) SLC34A2 (ENSGALG00010010900) ANAPC4 (ENSGALG00010010933) ZCCHC4 (ENSGALG00010010939) PI4K2B (ENSGALG00010010945) SEPSECS (ENSGALG00010010161) ENSGALG00010010175 LGI2 (ENSGALG00010010178) CCDC149 (ENSGALG00010009728) SOD3 (ENSGALG00010009833) DHX15 (ENSGALG00010009943) PPARGC1A (ENSGALG00010010006) ##22 ENSGALG00010010027 ADGRA3 (ENSGALG00010009200) KCNIP4 (ENSGALG00010010298) PACRGL (ENSGALG00010010308) SLIT2 (ENSGALG00010010383) LCORL (ENSGALG00010010971) LCORL (ENSGALG00010010958) NCAPG (ENSGALG00010010974) ENSGALG00010012058 ENSGALG00010010979 MED28 (ENSGALG00010010983) LAP3 (ENSGALG00010010997) CLRN2 (ENSGALG00010011000) QDPR (ENSGALG00010011018) LDB2 (ENSGALG00010011096) Japanese quail MODERN SPECIES 22 TBC1D19 (ENSCJPG00005018350) CCKAR (ENSCJPG00005018351) RBPJ (ENSCJPG00005018352) SMIM20 (ENSCJPG00005018355) SEL1L3 (ENSCJPG00005018359) ENSCJPG00005018366 ANAPC4 (ENSCJPG00005018368) ZCCHC4 (ENSCJPG00005018369) PI4K2B (ENSCJPG00005018370) SEPSECS (ENSCJPG00005018371) ENSCJPG00005018372 LGI2 (ENSCJPG00005018373) CCDC149 (ENSCJPG00005018374) SOD3 (ENSCJPG00005018375) DHX15 (ENSCJPG00005018376) PPARGC1A (ENSCJPG00005018379) ##22 ADGRA3 (ENSCJPG00005018386) KCNIP4 (ENSCJPG00005018389) PACRGL (ENSCJPG00005018390) SLIT2 (ENSCJPG00005018391) LCORL (ENSCJPG00005018397) NCAPG (ENSCJPG00005018398) FAM184B (ENSCJPG00005018399) MED28 (ENSCJPG00005018400) LAP3 (ENSCJPG00005018401) CLRN2 (ENSCJPG00005018402) QDPR (ENSCJPG00005018403) LDB2 (ENSCJPG00005018404) TAPT1 (ENSCJPG00005018406) PROM1 (ENSCJPG00005018407) FGFBP2 (ENSCJPG00005018408) Neognathae_b ANCESTRAL SPECIES 4 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00980000201267 ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b Neognathae_c ANCESTRAL SPECIES 3 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00980000201267 ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b Golden eagle MODERN SPECIES STIM2 (ENSACCG00020000216) TBC1D19 (ENSACCG00020000215) CCKAR (ENSACCG00020000214) RBPJ (ENSACCG00020000213) SMIM20 (ENSACCG00020000212) SEL1L3 (ENSACCG00020000211) ENSACCG00020000210 ANAPC4 (ENSACCG00020000209) ZCCHC4 (ENSACCG00020000208) PI4K2B (ENSACCG00020000207) SEPSECS (ENSACCG00020000206) LGI2 (ENSACCG00020000205) CCDC149 (ENSACCG00020000204) SOD3 (ENSACCG00020000203) DHX15 (ENSACCG00020000202) PPARGC1A (ENSACCG00020000201) ##22 ADGRA3 (ENSACCG00020000200) KCNIP4 (ENSACCG00020000199) PACRGL (ENSACCG00020000198) SLIT2 (ENSACCG00020000196) ENSACCG00020000195 LCORL (ENSACCG00020000194) NCAPG (ENSACCG00020000193) FAM184B (ENSACCG00020000192) MED28 (ENSACCG00020000191) LAP3 (ENSACCG00020000190) CLRN2 (ENSACCG00020000189) QDPR (ENSACCG00020000188) LDB2 (ENSACCG00020000187) TAPT1 (ENSACCG00020000186) PROM1 (ENSACCG00020000185) Kakapo MODERN SPECIES 24 CCKAR (ENSSHBG00005018052) RBPJ (ENSSHBG00005018048) ENSSHBG00005018043 ENSSHBG00005018035 SEL1L3 (ENSSHBG00005018031) ENSSHBG00005018026 ENSSHBG00005018018 ENSSHBG00005018011 ZCCHC4 (ENSSHBG00005018004) PI4K2B (ENSSHBG00005018001) SEPSECS (ENSSHBG00005017996) LGI2 (ENSSHBG00005017808) CCDC149 (ENSSHBG00005017766) SOD3 (ENSSHBG00005017737) DHX15 (ENSSHBG00005017735) PPARGC1A (ENSSHBG00005017729) ##22 ENSSHBG00005017723 ADGRA3 (ENSSHBG00005017709) ENSSHBG00005017698 KCNIP4 (ENSSHBG00005017689) PACRGL (ENSSHBG00005017674) SLIT2 (ENSSHBG00005012686) LCORL (ENSSHBG00005011891) ENSSHBG00005011838 ENSSHBG00005011809 ENSSHBG00005011791 MED28 (ENSSHBG00005011774) LAP3 (ENSSHBG00005011753) CLRN2 (ENSSHBG00005011732) QDPR (ENSSHBG00005011714) LDB2 (ENSSHBG00005011680) Passeriformes ANCESTRAL SPECIES 4 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b Passeriformes_d ANCESTRAL SPECIES 4 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a.b ENSGT00390000010628 ENSGT00530000063586.b Passeriformes_g DUPLICATION Passeriformes_g ANCESTRAL SPECIES 5 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a.b ##22 ENSGT00950000183137.b.a.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a.b ENSGT00390000010628 ENSGT00530000063586.b Passeroidea ANCESTRAL SPECIES 4 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a.b ##22 ENSGT00950000183137.b.a.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a.b ENSGT00390000010628 ENSGT00530000063586.b Zebra finch MODERN SPECIES 25 STIM2 (ENSTGUG00000009177) TBC1D19 (ENSTGUG00000009193) CCKAR (ENSTGUG00000009230) RBPJ (ENSTGUG00000009245) SMIM20 (ENSTGUG00000009263) SEL1L3 (ENSTGUG00000009265) ENSTGUG00000009289 ANAPC4 (ENSTGUG00000009328) ZCCHC4 (ENSTGUG00000009397) PI4K2B (ENSTGUG00000009404) SEPSECS (ENSTGUG00000009417) LGI2 (ENSTGUG00000021263) CCDC149 (ENSTGUG00000009438) SOD3 (ENSTGUG00000009451) DHX15 (ENSTGUG00000009452) PPARGC1A (ENSTGUG00000009487) ##22 ADGRA3 (ENSTGUG00000009517) KCNIP4 (ENSTGUG00000009548) PACRGL (ENSTGUG00000009573) SLIT2 (ENSTGUG00000009575) LCORL (ENSTGUG00000024633) NCAPG (ENSTGUG00000009641) FAM184B (ENSTGUG00000009652) MED28 (ENSTGUG00000009655) LAP3 (ENSTGUG00000009661) CLRN2 (ENSTGUG00000021577) QDPR (ENSTGUG00000023659) LDB2 (ENSTGUG00000009708) TAPT1 (ENSTGUG00000009719) PROM1 (ENSTGUG00000009725) FGFBP2 (ENSTGUG00000009762) Medium ground finch MODERN SPECIES TBC1D19 (ENSGFOG00000001691) CCKAR (ENSGFOG00000001670) RBPJ (ENSGFOG00000001663) ENSGFOG00000001653 SEL1L3 (ENSGFOG00000001635) ENSGFOG00000001618 ANAPC4 (ENSGFOG00000001587) ZCCHC4 (ENSGFOG00000001560) PI4K2B (ENSGFOG00000001541) SEPSECS (ENSGFOG00000001468) LGI2 (ENSGFOG00000001453) CCDC149 (ENSGFOG00000001434) SOD3 (ENSGFOG00000001424) DHX15 (ENSGFOG00000001405) ENSGFOG00000001391 ##22 ENSGFOG00000001383 ##22 ADGRA3 (ENSGFOG00000001255) KCNIP4 (ENSGFOG00000001224) PACRGL (ENSGFOG00000001209) SLIT2 (ENSGFOG00000001040) LCORL (ENSGFOG00000001000) NCAPG (ENSGFOG00000000976) FAM184B (ENSGFOG00000000947) MED28 (ENSGFOG00000000924) LAP3 (ENSGFOG00000000912) CLRN2 (ENSGFOG00000000908) QDPR (ENSGFOG00000000896) LDB2 (ENSGFOG00000000880) TAPT1 (ENSGFOG00000000647) PROM1 (ENSGFOG00000000527) FGFBP2 (ENSGFOG00000000505) Passeriformes_g ANCESTRAL SPECIES 5 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a.b ##22 ENSGT00950000183137.b.a.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a.b ENSGT00390000010628 Passeroidea ANCESTRAL SPECIES 4 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a.b ##22 ENSGT00950000183137.b.a.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a.b ENSGT00390000010628 Common canary MODERN SPECIES 2 STIM2 (ENSSCAG00000004950) TBC1D19 (ENSSCAG00000004860) CCKAR (ENSSCAG00000004827) RBPJ (ENSSCAG00000004817) SMIM20 (ENSSCAG00000004809) SEL1L3 (ENSSCAG00000004798) ENSSCAG00000004791 ANAPC4 (ENSSCAG00000004765) ZCCHC4 (ENSSCAG00000004739) PI4K2B (ENSSCAG00000004729) SEPSECS (ENSSCAG00000004722) LGI2 (ENSSCAG00000004718) CCDC149 (ENSSCAG00000004710) SOD3 (ENSSCAG00000004707) DHX15 (ENSSCAG00000004696) PPARGC1A (ENSSCAG00000004681) ##22 ADGRA3 (ENSSCAG00000004631) KCNIP4 (ENSSCAG00000004606) PACRGL (ENSSCAG00000004596) SLIT2 (ENSSCAG00000002023) ENSSCAG00000001527 LCORL (ENSSCAG00000001523) NCAPG (ENSSCAG00000001509) FAM184B (ENSSCAG00000001496) MED28 (ENSSCAG00000001491) LAP3 (ENSSCAG00000001484) CLRN2 (ENSSCAG00000001470) QDPR (ENSSCAG00000001462) LDB2 (ENSSCAG00000001448) TAPT1 (ENSSCAG00000001104) PROM1 (ENSSCAG00000000963) Medium ground finch MODERN SPECIES STIM2 (ENSGFOG00000001728) TBC1D19 (ENSGFOG00000001691) CCKAR (ENSGFOG00000001670) RBPJ (ENSGFOG00000001663) ENSGFOG00000001653 SEL1L3 (ENSGFOG00000001635) ENSGFOG00000001618 ANAPC4 (ENSGFOG00000001587) ZCCHC4 (ENSGFOG00000001560) PI4K2B (ENSGFOG00000001541) SEPSECS (ENSGFOG00000001468) LGI2 (ENSGFOG00000001453) CCDC149 (ENSGFOG00000001434) SOD3 (ENSGFOG00000001424) DHX15 (ENSGFOG00000001405) ENSGFOG00000001391 ##22 ENSGFOG00000001383 ##22 ADGRA3 (ENSGFOG00000001255) KCNIP4 (ENSGFOG00000001224) PACRGL (ENSGFOG00000001209) SLIT2 (ENSGFOG00000001040) LCORL (ENSGFOG00000001000) NCAPG (ENSGFOG00000000976) FAM184B (ENSGFOG00000000947) MED28 (ENSGFOG00000000924) LAP3 (ENSGFOG00000000912) CLRN2 (ENSGFOG00000000908) QDPR (ENSGFOG00000000896) LDB2 (ENSGFOG00000000880) TAPT1 (ENSGFOG00000000647) PROM1 (ENSGFOG00000000527) Flycatcher MODERN SPECIES 22 ENSFALG00000024970 STIM2 (ENSFALG00000009145) TBC1D19 (ENSFALG00000009147) CCKAR (ENSFALG00000009150) RBPJ (ENSFALG00000028202) SMIM20 (ENSFALG00000009156) SEL1L3 (ENSFALG00000009157) ENSFALG00000009167 ANAPC4 (ENSFALG00000009180) PI4K2B (ENSFALG00000009183) SEPSECS (ENSFALG00000009193) LGI2 (ENSFALG00000024523) CCDC149 (ENSFALG00000009207) SOD3 (ENSFALG00000014662) DHX15 (ENSFALG00000009210) PPARGC1A (ENSFALG00000009211) ##22 ADGRA3 (ENSFALG00000009212) KCNIP4 (ENSFALG00000009214) PACRGL (ENSFALG00000009221) SLIT2 (ENSFALG00000009223) LCORL (ENSFALG00000009227) NCAPG (ENSFALG00000009232) FAM184B (ENSFALG00000009234) MED28 (ENSFALG00000009238) LAP3 (ENSFALG00000009242) CLRN2 (ENSFALG00000028197) QDPR (ENSFALG00000027910) ENSFALG00000009259 ENSFALG00000023317 TAPT1 (ENSFALG00000009267) PROM1 (ENSFALG00000009278) Great tit MODERN SPECIES 23 ENSPMJG00000016294 STIM2 (ENSPMJG00000016298) TBC1D19 (ENSPMJG00000016299) CCKAR (ENSPMJG00000016300) RBPJ (ENSPMJG00000016301) SMIM20 (ENSPMJG00000016303) SEL1L3 (ENSPMJG00000016304) ENSPMJG00000016305 ANAPC4 (ENSPMJG00000016306) ZCCHC4 (ENSPMJG00000016307) PI4K2B (ENSPMJG00000016308) LGI2 (ENSPMJG00000016309) CCDC149 (ENSPMJG00000016310) SOD3 (ENSPMJG00000016311) DHX15 (ENSPMJG00000016312) PPARGC1A (ENSPMJG00000016314) ##22 ADGRA3 (ENSPMJG00000016320) KCNIP4 (ENSPMJG00000016323) PACRGL (ENSPMJG00000016324) SLIT2 (ENSPMJG00000016326) LCORL (ENSPMJG00000016341) NCAPG (ENSPMJG00000016343) FAM184B (ENSPMJG00000016345) MED28 (ENSPMJG00000016346) LAP3 (ENSPMJG00000016347) CLRN2 (ENSPMJG00000016348) QDPR (ENSPMJG00000016349) LDB2 (ENSPMJG00000016350) TAPT1 (ENSPMJG00000016351) PROM1 (ENSPMJG00000016354) FGFBP2 (ENSPMJG00000016358) African ostrich MODERN SPECIES 548 PCDH7 (ENSSCUG00000006563) STIM2 (ENSSCUG00000006544) TBC1D19 (ENSSCUG00000006542) CCKAR (ENSSCUG00000006541) RBPJ (ENSSCUG00000006539) SEL1L3 (ENSSCUG00000006536) ENSSCUG00000006534 ANAPC4 (ENSSCUG00000006515) ZCCHC4 (ENSSCUG00000006498) PI4K2B (ENSSCUG00000006495) SEPSECS (ENSSCUG00000006488) LGI2 (ENSSCUG00000006480) CCDC149 (ENSSCUG00000006474) SOD3 (ENSSCUG00000006470) DHX15 (ENSSCUG00000006468) PPARGC1A (ENSSCUG00000006459) ##22 GBA3 (ENSSCUG00000006451) ADGRA3 (ENSSCUG00000006446) KCNIP4 (ENSSCUG00000006432) PACRGL (ENSSCUG00000006427) SLIT2 (ENSSCUG00000006422) LCORL (ENSSCUG00000006417) NCAPG (ENSSCUG00000006416) FAM184B (ENSSCUG00000006414) MED28 (ENSSCUG00000006413) LAP3 (ENSSCUG00000006410) CLRN2 (ENSSCUG00000006409) QDPR (ENSSCUG00000006408) LDB2 (ENSSCUG00000006404) TAPT1 (ENSSCUG00000006387) PROM1 (ENSSCUG00000006375) Australian saltwater crocodile MODERN SPECIES 65 TBC1D19 (ENSCPRG00005005240) CCKAR (ENSCPRG00005005217) RBPJ (ENSCPRG00005005213) SMIM20 (ENSCPRG00005005197) SEL1L3 (ENSCPRG00005005084) ENSCPRG00005005064 ANAPC4 (ENSCPRG00005005005) ZCCHC4 (ENSCPRG00005004986) PI4K2B (ENSCPRG00005004981) SEPSECS (ENSCPRG00005004978) LGI2 (ENSCPRG00005004932) CCDC149 (ENSCPRG00005004911) SOD3 (ENSCPRG00005004903) DHX15 (ENSCPRG00005004902) ENSCPRG00005004898 PPARGC1A (ENSCPRG00005004873) ##22 ADGRA3 (ENSCPRG00005004846) ENSCPRG00005004791 KCNIP4 (ENSCPRG00005004785) PACRGL (ENSCPRG00005004777) SLIT2 (ENSCPRG00005004729) LCORL (ENSCPRG00005004691) NCAPG (ENSCPRG00005004674) FAM184B (ENSCPRG00005004659) MED28 (ENSCPRG00005004651) LAP3 (ENSCPRG00005004478) CLRN2 (ENSCPRG00005004449) QDPR (ENSCPRG00005004440) LDB2 (ENSCPRG00005004419) ENSCPRG00005004389 TAPT1 (ENSCPRG00005004379) Cryptodira ANCESTRAL SPECIES 2 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Testudinoidea ANCESTRAL SPECIES 10 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Emydidae ANCESTRAL SPECIES 1 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Three-toed box turtle MODERN SPECIES 26 STIM2 (ENSTMTG00000002059) TBC1D19 (ENSTMTG00000002117) CCKAR (ENSTMTG00000002168) RBPJ (ENSTMTG00000002176) ENSTMTG00000002188 SEL1L3 (ENSTMTG00000002230) ENSTMTG00000002359 ANAPC4 (ENSTMTG00000002376) ZCCHC4 (ENSTMTG00000002410) PI4K2B (ENSTMTG00000002417) SEPSECS (ENSTMTG00000002424) LGI2 (ENSTMTG00000002426) CCDC149 (ENSTMTG00000002431) SOD3 (ENSTMTG00000002436) DHX15 (ENSTMTG00000002439) PPARGC1A (ENSTMTG00000002447) ##22 GBA3 (ENSTMTG00000002452) ADGRA3 (ENSTMTG00000002458) KCNIP4 (ENSTMTG00000002466) ENSTMTG00000002473 SLIT2 (ENSTMTG00000002651) ENSTMTG00000005401 LCORL (ENSTMTG00000005413) NCAPG (ENSTMTG00000005492) FAM184B (ENSTMTG00000006529) MED28 (ENSTMTG00000006560) LAP3 (ENSTMTG00000006569) CLRN2 (ENSTMTG00000006597) QDPR (ENSTMTG00000006607) LDB2 (ENSTMTG00000006627) TAPT1 (ENSTMTG00000006647) painted turtle MODERN SPECIES 15 STIM2 (ENSCPBG00000027991) TBC1D19 (ENSCPBG00000027982) CCKAR (ENSCPBG00000027976) RBPJ (ENSCPBG00000027973) SMIM20 (ENSCPBG00000027970) SEL1L3 (ENSCPBG00000027969) ENSCPBG00000027967 ANAPC4 (ENSCPBG00000027964) ZCCHC4 (ENSCPBG00000027961) PI4K2B (ENSCPBG00000027959) SEPSECS (ENSCPBG00000027958) LGI2 (ENSCPBG00000027955) CCDC149 (ENSCPBG00000027952) SOD3 (ENSCPBG00000027950) DHX15 (ENSCPBG00000027946) PPARGC1A (ENSCPBG00000027936) ##22 GBA3 (ENSCPBG00000027931) ADGRA3 (ENSCPBG00000027926) KCNIP4 (ENSCPBG00000027922) PACRGL (ENSCPBG00000027917) SLIT2 (ENSCPBG00000027876) CORIN (ENSCPBG00000027875) ATP10D (ENSCPBG00000027872) COMMD8 (ENSCPBG00000027871) ENSCPBG00000027869 GABRA4 (ENSCPBG00000027868) GABRA2 (ENSCPBG00000027867) GABRG1 (ENSCPBG00000027866) ENSCPBG00000027865 ENSCPBG00000027863 UNC45B (ENSCPBG00000027851) Testudinidae ANCESTRAL SPECIES 11 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b Abingdon island giant tortoise MODERN SPECIES 1897 DHX15 (ENSCABG00000023140) PPARGC1A (ENSCABG00000023141) ##22 GBA3 (ENSCABG00000023142) ADGRA3 (ENSCABG00000023143) Goode s thornscrub tortoise MODERN SPECIES 19 STIM2 (ENSGEVG00005018809) TBC1D19 (ENSGEVG00005018764) CCKAR (ENSGEVG00005018734) RBPJ (ENSGEVG00005018699) SMIM20 (ENSGEVG00005018677) SEL1L3 (ENSGEVG00005018390) ENSGEVG00005018253 ANAPC4 (ENSGEVG00005018145) ZCCHC4 (ENSGEVG00005018084) PI4K2B (ENSGEVG00005018044) SEPSECS (ENSGEVG00005018007) LGI2 (ENSGEVG00005017978) CCDC149 (ENSGEVG00005017958) SOD3 (ENSGEVG00005017946) DHX15 (ENSGEVG00005017920) PPARGC1A (ENSGEVG00005017736) ##22 GBA3 (ENSGEVG00005017692) ENSGEVG00005017685 ADGRA3 (ENSGEVG00005017643) KCNIP4 (ENSGEVG00005017568) PACRGL (ENSGEVG00005017545) SLIT2 (ENSGEVG00005017408) LCORL (ENSGEVG00005017290) NCAPG (ENSGEVG00005017190) FAM184B (ENSGEVG00005017032) MED28 (ENSGEVG00005017002) LAP3 (ENSGEVG00005016970) CLRN2 (ENSGEVG00005016931) QDPR (ENSGEVG00005016893) LDB2 (ENSGEVG00005016780) TAPT1 (ENSGEVG00005016748) Chinese turtle MODERN SPECIES 2222 CCKAR (ENSPSIG00000016827) RBPJ (ENSPSIG00000016822) SMIM20 (ENSPSIG00000016781) ENSPSIG00000000844 ENSPSIG00000016650 ENSPSIG00000016641 ENSPSIG00000016305 ANAPC4 (ENSPSIG00000015647) ZCCHC4 (ENSPSIG00000015625) PI4K2B (ENSPSIG00000015479) SEPSECS (ENSPSIG00000014906) LGI2 (ENSPSIG00000014639) CCDC149 (ENSPSIG00000014502) SOD3 (ENSPSIG00000014347) DHX15 (ENSPSIG00000013524) PPARGC1A (ENSPSIG00000011790) ##22 GBA3 (ENSPSIG00000011741) ADGRA3 (ENSPSIG00000010975) ENSPSIG00000000521 ENSPSIG00000010673 Lepidosauria ANCESTRAL SPECIES 9 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Episquamata ANCESTRAL SPECIES 3 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Toxicofera ANCESTRAL SPECIES 21 ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT01040000242873 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 Elapidae DUPLICATION Elapidae DUPLICATION Elapidae ANCESTRAL SPECIES 22 ENSGT00940000159741 ENSGT00390000015386 ENSGT00940000162580 ENSGT00940000156391 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a.c.b ##22 ENSGT00950000183137.b.a.c.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 Elapidae_a ANCESTRAL SPECIES 25 ENSGT00940000159741 ENSGT00390000015386 ENSGT00940000162580 ENSGT00940000156391 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a.c.b ##22 ENSGT00950000183137.b.a.c.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 Acanthophiinae ANCESTRAL SPECIES 4 ENSGT00940000159741 ENSGT00390000015386 ENSGT00940000162580 ENSGT00940000156391 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800.k.a ENSGT00950000183137.b.a.c.b ##22 ENSGT00950000183137.b.a.c.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154372.a.b ENSGT00530000063586.b ENSGT00390000010628 ENSGT00390000005639.a.a ENSGT00390000000470 ENSGT00850000132319.a.a.b ENSGT00530000063255.B ENSGT00390000006192 ENSGT00390000001577 ENSGT00940000154965.B ENSGT00940000162414 Eastern brown snake MODERN SPECIES 12 RGS12 (ENSPTXG00000014789) DOK7 (ENSPTXG00000014785) HMX1 (ENSPTXG00000014784) CPZ (ENSPTXG00000014577) SEL1L3 (ENSPTXG00000014557) ENSPTXG00000014555 ENSPTXG00000014553 ZCCHC4 (ENSPTXG00000014551) PI4K2B (ENSPTXG00000014547) SEPSECS (ENSPTXG00000014544) LGI2 (ENSPTXG00000014385) CCDC149 (ENSPTXG00000014377) SOD3 (ENSPTXG00000014375) ENSPTXG00000014369 ENSPTXG00000014365 ##22 ENSPTXG00000014363 ##22 ADGRA3 (ENSPTXG00000014357) KCNIP4 (ENSPTXG00000014352) PACRGL (ENSPTXG00000014280) SLIT2 (ENSPTXG00000003109) FGFBP1 (ENSPTXG00000003001) PROM1 (ENSPTXG00000002997) TAPT1 (ENSPTXG00000002993) LDB2 (ENSPTXG00000002989) QDPR (ENSPTXG00000002987) CLRN2 (ENSPTXG00000002986) LAP3 (ENSPTXG00000002984) MED28 (ENSPTXG00000002981) ENSPTXG00000002978 LCORL (ENSPTXG00000002973) ENSPTXG00000002971 Mainland tiger snake MODERN SPECIES 108 PPARGC1A (ENSNSUG00000010610) ##22 ADGRA3 (ENSNSUG00000010618) KCNIP4 (ENSNSUG00000010661) ENSNSUG00000010662 SLIT2 (ENSNSUG00000010664) FGFBP1 (ENSNSUG00000010670) PROM1 (ENSNSUG00000010676) TAPT1 (ENSNSUG00000010687) LDB2 (ENSNSUG00000010926) QDPR (ENSNSUG00000010929) CLRN2 (ENSNSUG00000010930) LAP3 (ENSNSUG00000010931) MED28 (ENSNSUG00000010932) ENSNSUG00000010933 ENSNSUG00000010934 ENSNSUG00000010935 Indian cobra MODERN SPECIES 3 HTT (ENSNNAG00000015459) MSANTD1 (ENSNNAG00000015260) RGS12 (ENSNNAG00000015161) DOK7 (ENSNNAG00000015066) HMX1 (ENSNNAG00000015026) CPZ (ENSNNAG00000015015) ENSNNAG00000014962 ZCCHC4 (ENSNNAG00000014948) PI4K2B (ENSNNAG00000014852) SEPSECS (ENSNNAG00000014821) LGI2 (ENSNNAG00000014722) CCDC149 (ENSNNAG00000014613) SOD3 (ENSNNAG00000014595) DHX15 (ENSNNAG00000014577) ENSNNAG00000014553 PPARGC1A (ENSNNAG00000014522) ##22 ADGRA3 (ENSNNAG00000014236) KCNIP4 (ENSNNAG00000014013) PACRGL (ENSNNAG00000013981) SLIT2 (ENSNNAG00000013901) LDB2 (ENSNNAG00000013877) QDPR (ENSNNAG00000013862) CLRN2 (ENSNNAG00000013834) LAP3 (ENSNNAG00000013792) MED28 (ENSNNAG00000013760) NCAPG (ENSNNAG00000013717) ENSNNAG00000013685 ENSNNAG00000013522 PALLD (ENSNNAG00000012120) CBR4 (ENSNNAG00000012002) SH3RF1 (ENSNNAG00000011951) Elapidae ANCESTRAL SPECIES 22 ENSGT00940000159778 ENSGT00940000159741 ENSGT00390000015386 ENSGT00940000162580 ENSGT00940000156391 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a.c.b ##22 ENSGT00950000183137.b.a.c.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 Elapidae_a ANCESTRAL SPECIES 25 ENSGT00940000159778 ENSGT00940000159741 ENSGT00390000015386 ENSGT00940000162580 ENSGT00940000156391 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a.c.b ##22 ENSGT00950000183137.b.a.c.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 Acanthophiinae ANCESTRAL SPECIES 4 ENSGT00940000159778 ENSGT00940000159741 ENSGT00390000015386 ENSGT00940000162580 ENSGT00940000156391 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800.k.a ENSGT00950000183137.b.a.c.b ##22 ENSGT00950000183137.b.a.c.a ##22 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000154372.a.b ENSGT00530000063586.b ENSGT00390000010628 ENSGT00390000005639.a.a ENSGT00390000000470 ENSGT00850000132319.a.a.b ENSGT00530000063255.B ENSGT00390000006192 ENSGT00390000001577 ENSGT00940000154965.B Eastern brown snake MODERN SPECIES 12 HGFAC (ENSPTXG00000014791) RGS12 (ENSPTXG00000014789) DOK7 (ENSPTXG00000014785) HMX1 (ENSPTXG00000014784) CPZ (ENSPTXG00000014577) SEL1L3 (ENSPTXG00000014557) ENSPTXG00000014555 ENSPTXG00000014553 ZCCHC4 (ENSPTXG00000014551) PI4K2B (ENSPTXG00000014547) SEPSECS (ENSPTXG00000014544) LGI2 (ENSPTXG00000014385) CCDC149 (ENSPTXG00000014377) SOD3 (ENSPTXG00000014375) ENSPTXG00000014369 ENSPTXG00000014365 ##22 ENSPTXG00000014363 ##22 ADGRA3 (ENSPTXG00000014357) KCNIP4 (ENSPTXG00000014352) PACRGL (ENSPTXG00000014280) SLIT2 (ENSPTXG00000003109) FGFBP1 (ENSPTXG00000003001) PROM1 (ENSPTXG00000002997) TAPT1 (ENSPTXG00000002993) LDB2 (ENSPTXG00000002989) QDPR (ENSPTXG00000002987) CLRN2 (ENSPTXG00000002986) LAP3 (ENSPTXG00000002984) MED28 (ENSPTXG00000002981) ENSPTXG00000002978 LCORL (ENSPTXG00000002973) Elapidae ANCESTRAL SPECIES ENSGT00950000183137.b.a.d ##22 Elapidae_a ANCESTRAL SPECIES ENSGT00950000183137.b.a.d ##22 Blue-lipped sea krait MODERN SPECIES 4966 ENSLLTG00000016205 ##22 Lizard MODERN SPECIES 4 ENSACAG00000045555 TBC1D22A (ENSACAG00000004028) CERK (ENSACAG00000004135) GRAMD4 (ENSACAG00000004218) ENSACAG00000044432 KLB (ENSACAG00000007623) RFC1 (ENSACAG00000007579) WDR19 (ENSACAG00000007508) KLHL5 (ENSACAG00000007412) CCDC149 (ENSACAG00000000382) ENSACAG00000000410 DHX15 (ENSACAG00000000412) ENSACAG00000041740 ENSACAG00000028853 ENSACAG00000035171 PPARGC1A (ENSACAG00000000741) ##22 GBA3 (ENSACAG00000001008) ADGRA3 (ENSACAG00000001047) ENSACAG00000035774 ENSACAG00000039647 KCNIP4 (ENSACAG00000001279) ENSACAG00000038554 ENSACAG00000044078 ENSACAG00000040215 PACRGL (ENSACAG00000001294) SLIT2 (ENSACAG00000001304) ENSACAG00000044681 ENSACAG00000042769 NCAPG (ENSACAG00000002066) ENSACAG00000044171 FAM184B (ENSACAG00000011063) Laterata ANCESTRAL SPECIES 21 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a ENSGT00390000010628 ENSGT00530000063586.b Argentine black and white tegu MODERN SPECIES 1 STIM2 (ENSSMRG00000001982) TBC1D19 (ENSSMRG00000001948) CCKAR (ENSSMRG00000001920) RBPJ (ENSSMRG00000001903) SMIM20 (ENSSMRG00000001898) SEL1L3 (ENSSMRG00000001883) ENSSMRG00000001828 ANAPC4 (ENSSMRG00000001814) ZCCHC4 (ENSSMRG00000001737) PI4K2B (ENSSMRG00000001725) SEPSECS (ENSSMRG00000001718) LGI2 (ENSSMRG00000001701) CCDC149 (ENSSMRG00000001694) SOD3 (ENSSMRG00000001656) DHX15 (ENSSMRG00000001639) PPARGC1A (ENSSMRG00000001615) ##22 GBA3 (ENSSMRG00000001542) ADGRA3 (ENSSMRG00000001520) KCNIP4 (ENSSMRG00000001469) PACRGL (ENSSMRG00000001371) SLIT2 (ENSSMRG00000001324) ENSSMRG00000000978 NCAPG (ENSSMRG00000000940) FAM184B (ENSSMRG00000000763) MED28 (ENSSMRG00000000730) LAP3 (ENSSMRG00000000708) CLRN2 (ENSSMRG00000000698) QDPR (ENSSMRG00000000697) LDB2 (ENSSMRG00000000662) ENSSMRG00000000602 TAPT1 (ENSSMRG00000000542) Common wall lizard MODERN SPECIES 17 SEL1L3 (ENSPMRG00000013412) ENSPMRG00000013390 ENSPMRG00000013386 ANAPC4 (ENSPMRG00000012834) ZCCHC4 (ENSPMRG00000012751) PI4K2B (ENSPMRG00000012743) SEPSECS (ENSPMRG00000012735) ENSPMRG00000012728 ENSPMRG00000012723 ENSPMRG00000012716 ENSPMRG00000012712 CCDC149 (ENSPMRG00000012672) SOD3 (ENSPMRG00000012656) ENSPMRG00000012650 DHX15 (ENSPMRG00000012637) PPARGC1A (ENSPMRG00000012623) ##22 ENSPMRG00000012618 GBA3 (ENSPMRG00000012612) ADGRA3 (ENSPMRG00000012584) ENSPMRG00000012574 KCNIP4 (ENSPMRG00000012569) PACRGL (ENSPMRG00000012559) SLIT2 (ENSPMRG00000012451) ENSPMRG00000012414 ENSPMRG00000012409 ENSPMRG00000012397 NCAPG (ENSPMRG00000012378) MED28 (ENSPMRG00000012369) ENSPMRG00000012364 LAP3 (ENSPMRG00000012334) ENSPMRG00000012315 tuatara MODERN SPECIES 1248 FYTTD1 (ENSSPUG00000012549) LRCH3 (ENSSPUG00000012579) IQCG (ENSSPUG00000012714) ENSSPUG00000012977 SMIM20 (ENSSPUG00000012981) SEL1L3 (ENSSPUG00000013017) ENSSPUG00000013223 ANAPC4 (ENSSPUG00000013251) ZCCHC4 (ENSSPUG00000013292) ENSSPUG00000013365 SEPSECS (ENSSPUG00000013376) LGI2 (ENSSPUG00000013404) CCDC149 (ENSSPUG00000013513) SOD3 (ENSSPUG00000013526) DHX15 (ENSSPUG00000013533) PPARGC1A (ENSSPUG00000013556) ##22 GBA3 (ENSSPUG00000013605) ADGRA3 (ENSSPUG00000013618) Anura ANCESTRAL SPECIES 2 ENSGT00390000000214.a.b ENSGT00390000015965 ENSGT01100000263563.c.b ENSGT00390000005197.a ENSGT00390000002398 ENSGT00940000159983 ENSGT00950000183177.b ENSGT00390000004612 ENSGT00390000012556 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800 ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000165139 ENSGT00940000162414 ENSGT00390000001577 ENSGT00530000063669.a ENSGT00980000201435.a.a.a ENSGT00980000201435.a.a.b ENSGT00980000201435.a.b ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b Frog MODERN SPECIES cckar (ENSXETG00000000911) rbpj (ENSXETG00000046629) smim20 (ENSXETG00000043460) sel1l3 (ENSXETG00000000947) slc34a2 (ENSXETG00000000954) anapc4 (ENSXETG00000000957) zcchc4 (ENSXETG00000000960) pi4k2b (ENSXETG00000000962) ENSXETG00000020344 ENSXETG00000046969 sepsecs (ENSXETG00000002119) lgi2 (ENSXETG00000002120) ccdc149 (ENSXETG00000002121) sod3 (ENSXETG00000002122) dhx15 (ENSXETG00000002123) ppargc1a (ENSXETG00000020468) ##22 ENSXETG00000036897 or51e1 (ENSXETG00000020469) adgra3 (ENSXETG00000020470) kcnip4 (ENSXETG00000045139) pacrgl (ENSXETG00000020472) ENSXETG00000048458 slit2 (ENSXETG00000020473) ENSXETG00000043650 lcorl (ENSXETG00000039970) ENSXETG00000036171 ncapg (ENSXETG00000023826) FAM184B (ENSXETG00000041368) ENSXETG00000036945 ENSXETG00000035789 ENSXETG00000037544 Leishan spiny toad MODERN SPECIES SEL1L3 (ENSLLEG00000002464) ENSLLEG00000002525 ENSLLEG00000002565 ANAPC4 (ENSLLEG00000002614) ZCCHC4 (ENSLLEG00000002757) PI4K2B (ENSLLEG00000002831) SEPSECS (ENSLLEG00000002935) LGI2 (ENSLLEG00000003012) CCDC149 (ENSLLEG00000003067) SOD3 (ENSLLEG00000003122) DHX15 (ENSLLEG00000003148) ENSLLEG00000003217 ENSLLEG00000003228 ENSLLEG00000003250 ENSLLEG00000003265 PPARGC1A (ENSLLEG00000003271) ##22 ENSLLEG00000003299 ENSLLEG00000003306 ENSLLEG00000003311 GBA3 (ENSLLEG00000003323) ADGRA3 (ENSLLEG00000003347) ENSLLEG00000003418 ENSLLEG00000003425 ENSLLEG00000003429 KCNIP4 (ENSLLEG00000003440) ENSLLEG00000003469 ENSLLEG00000003480 PACRGL (ENSLLEG00000003489) ENSLLEG00000003502 SLIT2 (ENSLLEG00000003552) ENSLLEG00000003712 Coelacanth MODERN SPECIES 638 SEPSECS (ENSLACG00000001231) LGI2 (ENSLACG00000004097) CCDC149 (ENSLACG00000004919) SOD3 (ENSLACG00000006218) DHX15 (ENSLACG00000007225) PPARGC1A (ENSLACG00000014054) ##22 GBA3 (ENSLACG00000015881) Actinopterygii ANCESTRAL SPECIES 20 ENSGT00390000012556 ENSGT00940000168370 ENSGT00940000164655 ENSGT00390000010434.a ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800.a.b ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00940000159756 ENSGT00940000158402 ENSGT00940000162414 ENSGT00940000154965.B ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000013015 ENSGT00390000006192 ENSGT00530000063255.B ENSGT00850000132319.a.a.b ENSGT00390000000470 ENSGT00390000005639.a.a Neopterygii ANCESTRAL SPECIES 259 ENSGT00390000007332 ENSGT00940000157294 ENSGT00390000015958 ENSGT00940000162224 ENSGT00940000155800.a.b ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a ENSGT00950000183027.b ENSGT00940000156337 Osteoglossocephalai ANCESTRAL SPECIES 261 ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.A ENSGT00390000015958.d ENSGT00940000157294.c ENSGT00390000015958.c ENSGT00940000162224 ENSGT00940000155800.a.b ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.b ENSGT00950000183027.b.a ENSGT00940000156337.d ENSGT00800000124172.j Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 103 ENSGT00940000153289.a.a.b ENSGT00940000157772 ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a.e ENSGT00390000014293.a.g ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00390000007332 ENSGT00940000157294.d.a ENSGT00940000165054.A ENSGT00390000015958.d ENSGT00940000155800.a.b.a ENSGT00950000183137.b.a.e ##22 ENSGT00940000160460 ENSGT00940000157235.g P. kingsleyae MODERN SPECIES 273 vstm2a (ENSPKIG00000004322) HECW1 (ENSPKIG00000004204) stk17a (ENSPKIG00000004154) trmt10a (ENSPKIG00000004059) C4orf54 (ENSPKIG00000004041) sepsecs (ENSPKIG00000003978) lgi2a (ENSPKIG00000003923) ccdc149a (ENSPKIG00000003869) dhx15 (ENSPKIG00000003730) PPARGC1A (ENSPKIG00000003643) ##22 gba3 (ENSPKIG00000003613) ADGRA3 (ENSPKIG00000003579) Asian bonytongue MODERN SPECIES 20 ENSSFOG00015019048 ACO1 (ENSSFOG00015018941) frem1a (ENSSFOG00015018913) ENSSFOG00015018901 tspan5a (ENSSFOG00015018876) RAP1GDS1 (ENSSFOG00015018811) slc1a1 (ENSSFOG00015018753) spata6l (ENSSFOG00015018726) trmt10a (ENSSFOG00015018710) ENSSFOG00015018699 sepsecs (ENSSFOG00015030052) lgi2a (ENSSFOG00015018648) ENSSFOG00015025930 ccdc149a (ENSSFOG00015018593) dhx15 (ENSSFOG00015018549) PPARGC1A (ENSSFOG00015018522) ##22 gba3 (ENSSFOG00015018516) ADGRA3 (ENSSFOG00015018468) KCNIP4 (ENSSFOG00015018405) ENSSFOG00015018368 SYNPO2 (ENSSFOG00015032764) myoz2a (ENSSFOG00015018331) USP53 (ENSSFOG00015018293) ENSSFOG00015029766 FABP2 (ENSSFOG00015029809) DMRTA1 (ENSSFOG00015029453) elavl2 (ENSSFOG00015027679) CAAP1 (ENSSFOG00015030065) PTPRD (ENSSFOG00015018170) TYRP1 (ENSSFOG00015018063) LURAP1L (ENSSFOG00015031107) Osteoglossiformes ANCESTRAL SPECIES 60 ENSGT00940000160246.b ENSGT00940000158215.j ENSGT00390000009819.a.a ENSGT00940000154404.b.e.a ENSGT00530000063926.a ENSGT00940000155429.a.a.f ENSGT00390000014293.a.h ENSGT00940000155397.a.a.b ENSGT00940000155397.a.a.a ENSGT00390000011412 ENSGT00730000111645.b ENSGT00940000157294.d.b ENSGT00390000015958.c ENSGT00940000162224 ENSGT00940000155800.a.b.b ENSGT00950000183137.b.a.f ##22 ENSGT00940000157235.h ENSGT00940000158985 ENSGT00950000182924.A.b.a.b.j ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00800000124172.i ENSGT00940000160640 ENSGT00940000156823.e.g ENSGT00510000047770.c.b ENSGT00940000156823.e.h.b ENSGT00390000017010 ENSGT00940000153617.D ENSGT00940000155804.k.a ENSGT00530000063790.b.g P. kingsleyae MODERN SPECIES 25 ENSPKIG00000003186 ENSPKIG00000003157 echs1 (ENSPKIG00000003138) ENSPKIG00000003126 ENSPKIG00000003112 tspan5a (ENSPKIG00000003076) RAP1GDS1 (ENSPKIG00000003021) SLC1A1 (ENSPKIG00000002887) SLC1A1 (ENSPKIG00000002771) mttp (ENSPKIG00000002708) C4orf54 (ENSPKIG00000002685) lgi2a (ENSPKIG00000002649) ccdc149b (ENSPKIG00000002620) SOD3 (ENSPKIG00000002602) dhx15 (ENSPKIG00000002577) PPARGC1A (ENSPKIG00000002531) ##22 ADGRA3 (ENSPKIG00000002480) ENSPKIG00000002372 ENSPKIG00000002296 ENSPKIG00000002241 sec24d (ENSPKIG00000002201) ENSPKIG00000002178 ENSPKIG00000002169 ENSPKIG00000002147 ENSPKIG00000002133 ENSPKIG00000002115 ENSPKIG00000002093 ENSPKIG00000002077 myoz2b (ENSPKIG00000002037) ENSPKIG00000002000 fabp2 (ENSPKIG00000001969) Asian bonytongue MODERN SPECIES 7 rps6 (ENSSFOG00015002123) ACER2 (ENSSFOG00015002097) ENSSFOG00015002114 ENSSFOG00015002079 ENSSFOG00015002051 tspan5a (ENSSFOG00015030250) RAP1GDS1 (ENSSFOG00015001923) SLC1A1 (ENSSFOG00015001795) SLC1A1 (ENSSFOG00015001787) mttp (ENSSFOG00015001768) C4orf54 (ENSSFOG00015001759) lgi2a (ENSSFOG00015001715) ccdc149b (ENSSFOG00015028556) SOD3 (ENSSFOG00015001702) dhx15 (ENSSFOG00015001653) PPARGC1A (ENSSFOG00015001633) ##22 ADGRA3 (ENSSFOG00015001554) KCNIP4 (ENSSFOG00015001513) sec24d (ENSSFOG00015001430) ENSSFOG00015028177 myoz2b (ENSSFOG00015001358) USP53 (ENSSFOG00015001304) fabp2 (ENSSFOG00015001291) ENSSFOG00015026817 elavl2 (ENSSFOG00015001257) smc2 (ENSSFOG00015001137) ecpas (ENSSFOG00015000926) kdm4c (ENSSFOG00015000814) PTPRD (ENSSFOG00015000700) ENSSFOG00015000683 ENSSFOG00015000612 Clupeocephala ANCESTRAL SPECIES 316 ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.A ENSGT00390000015958.d ENSGT00940000162224 ENSGT00940000155800.a.b ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT01060000248649 ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c Otomorpha ANCESTRAL SPECIES 145 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00390000007252.c ENSGT00950000182920.b.a.b.a.a ENSGT00390000008250 ENSGT00940000158215 ENSGT00730000110920.b.a.b ENSGT00940000153289.a.a.b ENSGT00940000157772 ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.A ENSGT00390000015958.d ENSGT00940000162224 ENSGT00940000155800.a.b ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a Otophysi ANCESTRAL SPECIES 50 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00390000007252.c ENSGT00950000182920.b.a.b.a.a ENSGT00390000008250 ENSGT00940000158215 ENSGT00730000110920.b.a.b ENSGT00940000153289.a.a.b ENSGT00940000157772 ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.A ENSGT00390000015958.d ENSGT00940000162224 ENSGT00940000155800.a.b ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00940000163587.a.b.b.e.a ENSGT00950000183153.c.a.q Characiphysae ANCESTRAL SPECIES 19 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00390000007252.c ENSGT00950000182920.b.a.b.a.a ENSGT00390000008250 ENSGT00940000158215 ENSGT00730000110920.b.a.b ENSGT00940000153289.a.a.b ENSGT00940000157772 ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.A ENSGT00390000015958.d ENSGT00940000162224 ENSGT00940000155800.a.b ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00390000009210 ENSGT00940000166308 Channel catfish MODERN SPECIES 26 adamtsl1 (ENSIPUG00000019767) ENSIPUG00000019873 larp7 (ENSIPUG00000019886) plin2 (ENSIPUG00000019925) haus6 (ENSIPUG00000019938) DENND4C (ENSIPUG00000019984) acer2 (ENSIPUG00000020048) ENSIPUG00000020070 ENSIPUG00000020076 ACO1 (ENSIPUG00000020088) sepsecs (ENSIPUG00000020145) lgi2 (ENSIPUG00000020178) ENSIPUG00000020191 ccdc149a (ENSIPUG00000020203) dhx15 (ENSIPUG00000020233) PPARGC1A (ENSIPUG00000020313) ##22 gba3 (ENSIPUG00000020346) adgra3 (ENSIPUG00000020357) kcnip4 (ENSIPUG00000020401) sec24d (ENSIPUG00000020455) SYNPO2 (ENSIPUG00000020468) myoz2a (ENSIPUG00000020473) ENSIPUG00000020482 ENSIPUG00000020510 ENSIPUG00000020520 ENSIPUG00000020532 ENSIPUG00000020539 vbp1 (ENSIPUG00000020555) ENSIPUG00000020571 ENSIPUG00000020603 rab39b (ENSIPUG00000020833) Characiphysae_b ANCESTRAL SPECIES 18 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00390000007252.c ENSGT00950000182920.b.a.b.a.a ENSGT00390000008250 ENSGT00940000158215 ENSGT00730000110920.b.a.b ENSGT00940000153289.a.a.b ENSGT00940000157772 ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.A ENSGT00390000015958.d ENSGT00940000162224 ENSGT00940000155800.a.b ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000173396 ENSGT01030000234601.s ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b Characoidei ANCESTRAL SPECIES 9 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00390000007252.c ENSGT00950000182920.b.a.b.a.a ENSGT00390000008250 ENSGT00940000158215 ENSGT00730000110920.b.a.b ENSGT00940000153289.a.a.b ENSGT00940000157772 ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.A ENSGT00390000015958.d ENSGT00940000162224 ENSGT00940000155800.a.b ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000173396 ENSGT01030000234601.s ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b Red-bellied piranha MODERN SPECIES 224 ENSPNAG00000004804 ccdc149a (ENSPNAG00000010255) dhx15 (ENSPNAG00000010321) PPARGC1A (ENSPNAG00000010393) ##22 gba3 (ENSPNAG00000010437) ADGRA3 (ENSPNAG00000001403) ENSPNAG00000001405 KCNIP4 (ENSPNAG00000010598) sec24d (ENSPNAG00000010613) SYNPO2 (ENSPNAG00000001422) myoz2a (ENSPNAG00000001423) USP53 (ENSPNAG00000010692) frem1a (ENSPNAG00000010747) ENSPNAG00000010756 tspan5a (ENSPNAG00000001444) RAP1GDS1 (ENSPNAG00000001461) slc1a1 (ENSPNAG00000010984) spata6l (ENSPNAG00000011014) gabarapb (ENSPNAG00000011021) Mexicana tetra MODERN SPECIES 7 spata6l (ENSAMXG00000013847) slc1a1 (ENSAMXG00000043975) ENSAMXG00000032033 RAP1GDS1 (ENSAMXG00000013835) tspan5a (ENSAMXG00000040397) ENSAMXG00000002335 frem1a (ENSAMXG00000002343) USP53 (ENSAMXG00000002366) myoz2a (ENSAMXG00000031405) ENSAMXG00000030857 sec24d (ENSAMXG00000002393) KCNIP4 (ENSAMXG00000002428) ENSAMXG00000030994 ADGRA3 (ENSAMXG00000002446) gba3 (ENSAMXG00000002452) PPARGC1A (ENSAMXG00000002461) ##22 ENSAMXG00000043979 ntn4 (ENSAMXG00000007434) dock11 (ENSAMXG00000007450) il13ra1 (ENSAMXG00000007475) ENSAMXG00000044091 ENSAMXG00000029236 il13ra1 (ENSAMXG00000030064) kirrel1a (ENSAMXG00000011544) ndufs2 (ENSAMXG00000039771) fcer1g (ENSAMXG00000030191) hacd4 (ENSAMXG00000037245) FOCAD (ENSAMXG00000011494) mllt3 (ENSAMXG00000038404) ENSAMXG00000037906 trmt10a (ENSAMXG00000040069) Electric eel MODERN SPECIES 233 ENSEEEG00000004146 dhx15 (ENSEEEG00000003913) ENSEEEG00000003910 PPARGC1A (ENSEEEG00000003907) ##22 gba3 (ENSEEEG00000003904) KCNIP4 (ENSEEEG00000003883) sec24d (ENSEEEG00000002150) SYNPO2 (ENSEEEG00000002124) myoz2a (ENSEEEG00000002112) USP53 (ENSEEEG00000002109) frem1a (ENSEEEG00000002103) Cyprinoidei ANCESTRAL SPECIES 41 ENSGT00940000154982.c ENSGT01030000234633.B.a.c ENSGT00390000006950 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00390000014786 ENSGT00730000110920.b.a.b.b ENSGT00940000153289.a.a.b ENSGT00940000157772 ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.A ENSGT00390000015958.d ENSGT00940000162224 ENSGT00940000155800.a.b ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00950000183153.c.a.r ENSGT00940000160688 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 188 ENSGT00950000183154.b.a.b ENSGT00390000014786 ENSGT00730000110920.b.a.b.b.a.a ENSGT00940000154404.b.i.a ENSGT00940000153289.a.a.b.a ENSGT00730000110920.b.a.b.b.a.b ENSGT00940000154404.b.i.b ENSGT00940000153289.a.a.b.b ENSGT00940000157772 ENSGT00390000007332 ENSGT00940000157294.d.k.a ENSGT00940000165054.A.a ENSGT00390000015958.d ENSGT00940000162224.g.a ENSGT00940000155800.a.b ENSGT00950000183137.b.a.g ##22 ENSGT00940000160460.b ENSGT00940000157235.j ENSGT00940000158985.r.b.b ENSGT00950000182924.A.b.a.b.d ENSGT00950000183054.a.a.a.a.c ENSGT00950000183027.b.b.h ENSGT00940000156337.c.c ENSGT00940000156337.c.d ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a.c.b ENSGT00940000161376 ENSGT00390000014293.a.e.a.b ENSGT00940000155397.a.b.b ENSGT00530000063821.b.b Goldfish MODERN SPECIES 25 lrp4 (ENSCARG00000026352) cacnb2a (ENSCARG00000022899) ENSCARG00000022801 SMCHD1 (ENSCARG00000022493) METTL4 (ENSCARG00000022455) adcyap1a (ENSCARG00000022450) ppp1r15a (ENSCARG00000022446) ENSCARG00000022435 ENSCARG00000022429 ACO1 (ENSCARG00000022132) ENSCARG00000022114 sepsecs (ENSCARG00000021929) lgi2a (ENSCARG00000021878) ccdc149a (ENSCARG00000021766) dhx15 (ENSCARG00000021356) PPARGC1A (ENSCARG00000020917) ##22 ADGRA3 (ENSCARG00000020576) ENSCARG00000020551 cdh11 (ENSCARG00000020379) ENSCARG00000020346 CDH8 (ENSCARG00000019299) ENSCARG00000019240 ADAMTS18 (ENSCARG00000019119) ENSCARG00000019102 PHKB (ENSCARG00000018873) ITFG1 (ENSCARG00000018805) NETO2 (ENSCARG00000018776) dnaja2a (ENSCARG00000018728) gpt2 (ENSCARG00000016369) zgc:92818 (ENSCARG00000016292) mylk3 (ENSCARG00000016238) Cyprininae_a ANCESTRAL SPECIES 141 ENSGT00730000110920.b.a.b.b.a.a ENSGT00940000154404.b.i.a ENSGT00940000153289.a.a.b.a ENSGT00940000153289.a.a.b.b ENSGT00940000157772 ENSGT00390000007332.g ENSGT00940000157294.d.k.a ENSGT00940000165054.A.a.a ENSGT00390000007332.h ENSGT00940000157294.d.k.b ENSGT00940000165054.A.b ENSGT00940000165054.A.a.b ENSGT00390000015958.d ENSGT00940000162224.g.b ENSGT00940000155800.a.b.o ENSGT00950000183137.b.a.g ##22 ENSGT00940000160460.b ENSGT00940000157235.j ENSGT00940000158985.r.b.b ENSGT00950000182924.A.b.a.b.d ENSGT00950000183054.a.a.a.a.c ENSGT00950000183027.b.b.h ENSGT00940000156337.c.c ENSGT00940000156337.c.d ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a.c.b ENSGT00390000014293.a.e.a.b ENSGT00940000155397.a.b.b ENSGT00530000063821.b.b ENSGT00940000166995.g Common carp reference MODERN SPECIES 6 ENSCCRG00000066462 ENSCCRG00000064777 ppp1r15a (ENSCCRG00000076631) ENSCCRG00000053263 ENSCCRG00000016223 sepsecs (ENSCCRG00000048219) lgi2a (ENSCCRG00000005289) ENSCCRG00000004568 sod3a (ENSCCRG00000061811) ENSCCRG00000056492 sod3a (ENSCCRG00000048918) sod3a (ENSCCRG00000066357) ENSCCRG00000069927 dhx15 (ENSCCRG00000003352) ENSCCRG00000080132 PPARGC1A (ENSCCRG00000031885) ##22 gba3 (ENSCCRG00000055057) ADGRA3 (ENSCCRG00000019901) KCNIP4 (ENSCCRG00000076448) sec24d (ENSCCRG00000081935) SYNPO2 (ENSCCRG00000068057) MYOZ2 (ENSCCRG00000082866) USP53 (ENSCCRG00000074205) frem1a (ENSCCRG00000031364) tspan5a (ENSCCRG00000043468) ENSCCRG00000033631 slc1a1 (ENSCCRG00000042132) ENSCCRG00000047549 ctdnep1b (ENSCCRG00000047601) elp5 (ENSCCRG00000047596) ENSCCRG00000071102 Golden-line barbel MODERN SPECIES 704 ACER2 (ENSSGRG00000026645) ppp1r15a (ENSSGRG00000026644) ENSSGRG00000026643 ENSSGRG00000026642 ACO1 (ENSSGRG00000026557) sepsecs (ENSSGRG00000026531) lgi2a (ENSSGRG00000026529) ENSSGRG00000026526 ENSSGRG00000026525 ccdc149a (ENSSGRG00000026479) sod3a (ENSSGRG00000026472) sod3a (ENSSGRG00000026471) sod3a (ENSSGRG00000026470) sod3a (ENSSGRG00000026468) dhx15 (ENSSGRG00000026151) PPARGC1A (ENSSGRG00000026144) ##22 Cyprininae ANCESTRAL SPECIES 858 ENSGT00950000183137.b.a.h ##22 ENSGT00940000160460.a ENSGT00940000157235.i ENSGT00940000158985.r.b.a ENSGT00950000182924.A.b.a.b.c ENSGT00950000183054.a.a.a.a.d ENSGT00950000183027.b.b.g Goldfish MODERN SPECIES 47 ENSCARG00000054374 ENSCARG00000054524 myl12.1 (ENSCARG00000054533) MYOM1 (ENSCARG00000054786) ENSCARG00000060513 SMCHD1 (ENSCARG00000060669) adcyap1a (ENSCARG00000062847) tyms (ENSCARG00000062865) ACER2 (ENSCARG00000062899) ppp1r15a (ENSCARG00000062920) ENSCARG00000062925 lgi2a (ENSCARG00000062932) ENSCARG00000062973 sod3a (ENSCARG00000063009) dhx15 (ENSCARG00000063047) PPARGC1A (ENSCARG00000063351) ##22 ENSCARG00000063752 gba3 (ENSCARG00000063771) ADGRA3 (ENSCARG00000063837) KCNIP4 (ENSCARG00000064167) sec24d (ENSCARG00000064536) SYNPO2 (ENSCARG00000067787) MYOZ2 (ENSCARG00000067791) USP53 (ENSCARG00000067800) frem1a (ENSCARG00000067826) ENSCARG00000067878 ENSCARG00000067886 RAP1GDS1 (ENSCARG00000067961) slc1a1 (ENSCARG00000068017) spata6l (ENSCARG00000068068) GABARAP (ENSCARG00000068082) Cyprininae_a ANCESTRAL SPECIES 619 ENSGT00940000162224.g.a ENSGT00940000155800.a.b.p ENSGT00950000183137.b.a.h ##22 ENSGT00940000160460.a ENSGT00940000157235.i ENSGT00940000158985.r.b.a ENSGT00950000182924.A.b.a.b.c ENSGT00950000183054.a.a.a.a.d ENSGT00950000183027.b.b.g Common carp reference MODERN SPECIES myl12.1 (ENSCCRG00000029974) MYOM1 (ENSCCRG00000044425) ENSCCRG00000040510 SMCHD1 (ENSCCRG00000044629) tyms (ENSCCRG00000048229) ENSCCRG00000064784 ppp1r15a (ENSCCRG00000081796) ENSCCRG00000016546 sepsecs (ENSCCRG00000045253) lgi2a (ENSCCRG00000048217) ENSCCRG00000076337 ENSCCRG00000043972 ccdc149a (ENSCCRG00000043977) sod3a (ENSCCRG00000077543) dhx15 (ENSCCRG00000072441) PPARGC1A (ENSCCRG00000020738) ##22 gba3 (ENSCCRG00000011902) ADGRA3 (ENSCCRG00000024750) KCNIP4 (ENSCCRG00000064572) sec24d (ENSCCRG00000061858) SYNPO2 (ENSCCRG00000068614) MYOZ2 (ENSCCRG00000078569) USP53 (ENSCCRG00000036700) frem1a (ENSCCRG00000063078) ENSCCRG00000069654 tspan5a (ENSCCRG00000065306) ENSCCRG00000042149 slc1a1 (ENSCCRG00000047608) spata6l (ENSCCRG00000047563) ENSCCRG00000060838 ctdnep1b (ENSCCRG00000054342) Golden-line barbel MODERN SPECIES 299 myl12.1 (ENSSGRG00000030663) MYOM1 (ENSSGRG00000030320) ENSSGRG00000030310 SMCHD1 (ENSSGRG00000030256) adcyap1a (ENSSGRG00000030240) adcyap1a (ENSSGRG00000030233) ENSSGRG00000030231 ppp1r15a (ENSSGRG00000030230) ENSSGRG00000030229 ACO1 (ENSSGRG00000029950) sepsecs (ENSSGRG00000029828) lgi2a (ENSSGRG00000029827) sod3a (ENSSGRG00000029823) sod3a (ENSSGRG00000029821) dhx15 (ENSSGRG00000029505) PPARGC1A (ENSSGRG00000029480) ##22 gba3 (ENSSGRG00000029478) ADGRA3 (ENSSGRG00000029477) Zebrafish MODERN SPECIES 22 ENSDARG00000102178 SMCHD1 (ENSDARG00000104374) METTL4 (ENSDARG00000088999) adcyap1a (ENSDARG00000004015) tyms (ENSDARG00000042894) ACER2 (ENSDARG00000077782) ppp1r15a (ENSDARG00000069135) ENSDARG00000101240 ACO1 (ENSDARG00000026376) sepsecs (ENSDARG00000033861) lgi2a (ENSDARG00000111069) ENSDARG00000087767 ccdc149a (ENSDARG00000078829) sod3a (ENSDARG00000070168) dhx15 (ENSDARG00000015392) PPARGC1A (ENSDARG00000067829) ##22 gba3 (ENSDARG00000031150) ADGRA3 (ENSDARG00000073673) KCNIP4 (ENSDARG00000088100) sec24d (ENSDARG00000045946) ENSDARG00000099032 myoz2a (ENSDARG00000012311) USP53 (ENSDARG00000078615) frem1a (ENSDARG00000069473) ENSDARG00000105048 tspan5a (ENSDARG00000086033) RAP1GDS1 (ENSDARG00000073741) slc1a1 (ENSDARG00000020212) spata6l (ENSDARG00000004874) gabarapb (ENSDARG00000052082) ctdnep1b (ENSDARG00000035781) Clupeiformes ANCESTRAL SPECIES 226 ENSGT00390000015958.d ENSGT00940000162224 ENSGT00940000155800.a.b ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a Denticle herring MODERN SPECIES pip4p1b (ENSDCDG00000005370) STK26 (ENSDCDG00000005372) ENSDCDG00000005408 DACH2 (ENSDCDG00000005410) cnpy3 (ENSDCDG00000005427) trpc5a (ENSDCDG00000005428) ENSDCDG00000005434 S100P (ENSDCDG00000005440) ENSDCDG00000005442 kiaa0232 (ENSDCDG00000005443) TBC1D14 (ENSDCDG00000005450) ccl36.1 (ENSDCDG00000010498) ccdc149a (ENSDCDG00000010527) sod3a (ENSDCDG00000010631) dhx15 (ENSDCDG00000010642) PPARGC1A (ENSDCDG00000010686) ##22 ADGRA3 (ENSDCDG00000010760) gba3 (ENSDCDG00000010832) KCNIP4 (ENSDCDG00000010857) sec24d (ENSDCDG00000011172) SYNPO2 (ENSDCDG00000018487) MYOZ2 (ENSDCDG00000018492) ENSDCDG00000018501 USP53 (ENSDCDG00000018506) SYNPO2 (ENSDCDG00000018518) ENSDCDG00000018519 frem1a (ENSDCDG00000018530) ENSDCDG00000018547 tspan5a (ENSDCDG00000018556) RAP1GDS1 (ENSDCDG00000018603) slc1a1 (ENSDCDG00000018776) Euteleosteomorpha ANCESTRAL SPECIES 191 ENSGT00730000111880 ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000153617.C.e.a ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a Protacanthopterygii ANCESTRAL SPECIES 20 ENSGT00530000062962.b.b ENSGT00730000111645.a ENSGT00940000165285.f ENSGT00530000063169.a ENSGT00530000063821.b.b ENSGT00940000155397.a.b ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000155429.a.a ENSGT00990000204039 ENSGT00940000156990 ENSGT00940000157772 ENSGT00940000153289.a.a.b ENSGT00390000015958.d ENSGT00940000155800.a.b.c ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985.e ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00940000154658.a ENSGT00950000182886.a.b ENSGT01090000260185.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 256 ENSGT00730000111645.a.d ENSGT00940000155903.g.b ENSGT00530000063652.a.a.b ENSGT00940000156306.d ENSGT00950000182916.a.b.a.b.u.a ENSGT00940000158006.a ENSGT00550000074944.k ENSGT00940000157772.c ENSGT00940000153289.a.a.b.c ENSGT00940000155800.b ENSGT00950000183137.b.a.i ##22 ENSGT00940000157235.l ENSGT00940000158985.e.b ENSGT00950000182924.A.b.a.b.h ENSGT00950000183054.a.a.b.d ENSGT00950000183054.a.a.a.a.h ENSGT00950000183027.b.b.e ENSGT00940000156337.c.g ENSGT00940000153617.B.h ENSGT00940000155804.k.a.a ENSGT00530000063790.b.d ENSGT00940000155586.B.g.b ENSGT00940000155527.j.a.e.a ENSGT00940000154658.a.d ENSGT00940000156022.a.c.b ENSGT01090000260185.a Huchen MODERN SPECIES 406 ENSHHUG00000009801 zdhhc21 (ENSHHUG00000009813) plaa (ENSHHUG00000009821) ENSHHUG00000009886 ENSHHUG00000009896 ACO1 (ENSHHUG00000009921) ENSHHUG00000010046 ACER2 (ENSHHUG00000010064) ENSHHUG00000010086 ENSHHUG00000010123 ENSHHUG00000010133 PPARGC1A (ENSHHUG00000010146) ##22 Salmoninae_a ANCESTRAL SPECIES 20 ENSGT00530000063169.a.r ENSGT00940000165285.f ENSGT00950000182774.b.a.b.a.b.a.b.a.a.a.a.a.a.b.a.a ENSGT00730000111645.a.d ENSGT00940000155903.g.b ENSGT00900000140979.a.a ENSGT00530000063652.a.a.b ENSGT00940000156306.d ENSGT00950000182916.a.b.a.b.u.a ENSGT00940000158006.a ENSGT00550000074944.k ENSGT00940000157772.c ENSGT00940000153289.a.a.b.c ENSGT00940000165054.B ENSGT00940000155800.b ENSGT00950000183137.b.a.i ##22 ENSGT00940000157235.l ENSGT00940000158985.e.b ENSGT00950000182924.A.b.a.b.h ENSGT00950000183054.a.a.a.a.h ENSGT00950000183027.b.b.e ENSGT00940000156337.c.g ENSGT00940000153617.B.h ENSGT00940000155804.k.a.a ENSGT00530000063790.b.d ENSGT00940000155586.B.g.b ENSGT00940000155527.j.a.e.a ENSGT00940000154658.a.d ENSGT00940000156022.a.c.b ENSGT01090000260185.a.a ENSGT01090000260185.a.b Salmo ANCESTRAL SPECIES 49 ENSGT00940000165285.f ENSGT00950000182774.b.a.b.a.b.a.b.a.a.a.a.a.a.b.a.a ENSGT00730000111645.a.d ENSGT00940000155903.g.b ENSGT00900000140979.a.a ENSGT00530000063652.a.a.b ENSGT00940000156306.d ENSGT00950000182866.D.d.a.c.a.i.b.a.a ENSGT00950000182916.a.b.a.b.v ENSGT00940000158006.a ENSGT00550000074944.k ENSGT00940000157772.c ENSGT00940000153289.a.a.b.c ENSGT00940000165054.B ENSGT00940000155800.b ENSGT00950000183137.b.a.i ##22 ENSGT00940000157235.l ENSGT00940000158985.e.a.a ENSGT00950000182924.A.b.a.b.h ENSGT00950000183054.a.a.a.a.h ENSGT00950000183027.b.b.e ENSGT00940000156337.c.g ENSGT00940000153617.B.h ENSGT00940000155804.k.a.a ENSGT00530000063790.b.d ENSGT00940000155586.B.g.b ENSGT00940000155527.j.a.e.a ENSGT00940000154658.a.d ENSGT00940000156022.a.c.b ENSGT01090000260185.a.a ENSGT00940000154273.b.h Atlantic salmon MODERN SPECIES 26 H2AZ1 (ENSSSAG00000039934) Ddit4l (ENSSSAG00000039999) PPP3CA (ENSSSAG00000040278) ENSSSAG00000057570 ENSSSAG00000057685 ENSSSAG00000062965 ENSSSAG00000062983 ENSSSAG00000063203 ENSSSAG00000086352 cj011 (ENSSSAG00000063292) ENSSSAG00000097570 ENSSSAG00000096793 ENSSSAG00000091906 ENSSSAG00000063308 ENSSSAG00000106996 PPARGC1A (ENSSSAG00000063349) ##22 ENSSSAG00000063507 KCNIP4 (ENSSSAG00000092519) sec24d (ENSSSAG00000002760) SYNPO2 (ENSSSAG00000007715) MYOZ2 (ENSSSAG00000102011) USP53 (ENSSSAG00000007723) ENSSSAG00000035522 ENSSSAG00000112123 PTPRD (ENSSSAG00000111433) ENSSSAG00000076592 ci150 (ENSSSAG00000076598) ENSSSAG00000076710 ENSSSAG00000078516 ENSSSAG00000079215 ENSSSAG00000101481 River trout MODERN SPECIES 38 mllt3 (ENSSTUG00000035120) H2AZ1 (ENSSTUG00000035152) DDIT4L (ENSSTUG00000035157) PPP3CA (ENSSTUG00000035269) nxpe3 (ENSSTUG00000040174) ENSSTUG00000040188 ENSSTUG00000040201 zdhhc21 (ENSSTUG00000040206) plaa (ENSSTUG00000040217) ACO1 (ENSSTUG00000040449) ENSSTUG00000040588 ACER2 (ENSSTUG00000040611) ENSSTUG00000040665 ENSSTUG00000040820 ENSSTUG00000040837 PPARGC1A (ENSSTUG00000040880) ##22 ADGRA3 (ENSSTUG00000040967) KCNIP4 (ENSSTUG00000041209) ENSSTUG00000041307 sec24d (ENSSTUG00000041379) SYNPO2 (ENSSTUG00000043865) MYOZ2 (ENSSTUG00000043874) USP53 (ENSSTUG00000043882) PTPRD (ENSSTUG00000044156) TYRP1 (ENSSTUG00000050648) LURAP1L (ENSSTUG00000050649) MPDZ (ENSSTUG00000050655) ADGRL3 (ENSSTUG00000050737) ENSSTUG00000051008 ENSSTUG00000051014 ENSSTUG00000030551 Oncorhynchus ANCESTRAL SPECIES 9 ENSGT00530000063169.a.r ENSGT00940000165285.f ENSGT00950000182774.b.a.b.a.b.a.b.a.a.a.a.a.a.b.a.a ENSGT00730000111645.a.d ENSGT00940000155903.g.b ENSGT00900000140979.a.a ENSGT00530000063652.a.a.b ENSGT00940000156306.d ENSGT00950000182916.a.b.a.b.u.a ENSGT00940000158006.a ENSGT00550000074944.k ENSGT00940000157772.c ENSGT00940000153289.a.a.b.c ENSGT00940000165054.B ENSGT00940000155800.b ENSGT00950000183137.b.a.i ##22 ENSGT00940000157235.l ENSGT00940000158985.e.b ENSGT00950000182924.A.b.a.b.h ENSGT00950000183054.a.a.a.a.h ENSGT00950000183027.b.b.e ENSGT00940000156337.c.g ENSGT00940000153617.B.h ENSGT00940000155804.k.a.a ENSGT00530000063790.b.d ENSGT00940000155586.B.g.b ENSGT00940000155527.j.a.e.a ENSGT00940000154658.a.d ENSGT00940000156022.a.c.b ENSGT01090000260185.a.a ENSGT00940000154273.b.h.a Rainbow trout MODERN SPECIES 13 H2AZ1 (ENSOMYG00000028216) ENSOMYG00000028197 ENSOMYG00000028176 PPP3CA (ENSOMYG00000026946) ENSOMYG00000064361 ENSOMYG00000026434 ENSOMYG00000026400 ENSOMYG00000026017 ENSOMYG00000045963 ENSOMYG00000045951 ENSOMYG00000045949 ENSOMYG00000072861 ENSOMYG00000045941 ENSOMYG00000057396 ENSOMYG00000062329 PPARGC1A (ENSOMYG00000045926) ##22 ENSOMYG00000045869 ENSOMYG00000045831 KCNIP4 (ENSOMYG00000045813) sec24d (ENSOMYG00000045731) SYNPO2 (ENSOMYG00000045708) MYOZ2 (ENSOMYG00000055798) ENSOMYG00000025319 USP53 (ENSOMYG00000045689) PTPRD (ENSOMYG00000044756) TYRP1 (ENSOMYG00000044591) LURAP1L (ENSOMYG00000044588) MPDZ (ENSOMYG00000043957) ENSOMYG00000034945 ENSOMYG00000033362 ENSOMYG00000033004 Oncorhynchus_a ANCESTRAL SPECIES 16 ENSGT00530000063169.a.r ENSGT00940000165285.f ENSGT00950000182774.b.a.b.a.b.a.b.a.a.a.a.a.a.b.a.a ENSGT00730000111645.a.d ENSGT00940000155903.g.b ENSGT00900000140979.a.a.n.a ENSGT00530000063652.a.a.b ENSGT00940000156306.d ENSGT00950000182916.a.b.a.b.u.a ENSGT00940000158006.a ENSGT00550000074944.k ENSGT00940000157772.c ENSGT00940000153289.a.a.b.c ENSGT00940000165054.B ENSGT00940000155800.b ENSGT00950000183137.b.a.i ##22 ENSGT00940000157235.l ENSGT00940000158985.e.b ENSGT00950000182924.A.b.a.b.h ENSGT00950000183054.a.a.a.a.h ENSGT00950000183027.b.b.e ENSGT00940000156337.c.g ENSGT00940000153617.B.h ENSGT00940000155804.k.a.a ENSGT00530000063790.b.d ENSGT00940000155586.B.g.b ENSGT00940000155527.j.a.e.a ENSGT00940000154658.a.d ENSGT00940000156022.a.c.b ENSGT01090000260185.a.a ENSGT00730000112044.e.a.b Chinook salmon MODERN SPECIES 6 PPP3CA (ENSOTSG00005047806) NFIB (ENSOTSG00005047799) zdhhc21 (ENSOTSG00005047798) plaa (ENSOTSG00005047796) ACO1 (ENSOTSG00005047791) ENSOTSG00005047789 ACER2 (ENSOTSG00005047788) ENSOTSG00005047787 ENSOTSG00005047786 ENSOTSG00005047785 ENSOTSG00005047784 cyp3a65 (ENSOTSG00005047783) cyp3a65 (ENSOTSG00005047782) cyp3a65 (ENSOTSG00005047781) ENSOTSG00005047780 ##22 PPARGC1A (ENSOTSG00005047779) ##22 ADGRA3 (ENSOTSG00005047778) KCNIP4 (ENSOTSG00005047776) sec24d (ENSOTSG00005047761) SYNPO2 (ENSOTSG00005047760) MYOZ2 (ENSOTSG00005047759) USP53 (ENSOTSG00005047758) PTPRD (ENSOTSG00005033249) TYRP1 (ENSOTSG00005033164) LURAP1L (ENSOTSG00005033163) MPDZ (ENSOTSG00005027964) ENSOTSG00005027936 NEURL4 (ENSOTSG00005027659) ENSOTSG00005027655 ENSOTSG00005027653 ndufs2 (ENSOTSG00005027463) Coho salmon MODERN SPECIES 29 TRMT10A (ENSOKIG00005008243) ENSOKIG00005008227 ENSOKIG00005008214 ENSOKIG00005008202 MLLT3 (ENSOKIG00005008168) ENSOKIG00005008127 DDIT4L (ENSOKIG00005008111) PPP3CA (ENSOKIG00005003983) NFIB (ENSOKIG00005003656) ZDHHC21 (ENSOKIG00005003629) plaa (ENSOKIG00005003581) ACO1 (ENSOKIG00005003541) ENSOKIG00005003521 ACER2 (ENSOKIG00005003511) ENSOKIG00005003493 PPARGC1A (ENSOKIG00005003470) ##22 ADGRA3 (ENSOKIG00005003387) ENSOKIG00005003345 KCNIP4 (ENSOKIG00005003328) sec24d (ENSOKIG00005002237) SYNPO2 (ENSOKIG00005001919) MYOZ2 (ENSOKIG00005001910) USP53 (ENSOKIG00005001862) ENSOKIG00005001836 ENSOKIG00005047144 PTPRD (ENSOKIG00005029261) TYRP1 (ENSOKIG00005028467) LURAP1L (ENSOKIG00005028452) MPDZ (ENSOKIG00005022843) ADGRL3 (ENSOKIG00005016342) ENSOKIG00005016099 Salmoninae ANCESTRAL SPECIES 269 ENSGT00530000062962.b.b ENSGT00730000111645.a.c ENSGT00530000063169.a.q ENSGT00940000155397.a.b.g ENSGT00940000180421 ENSGT00390000014293.a.d ENSGT00940000161376 ENSGT00940000155429.a.a.a ENSGT00990000204039 ENSGT00940000156990 ENSGT00940000157772.d ENSGT00940000153289.a.a.b.d ENSGT00940000163471.a.f ENSGT00390000015958.d ENSGT00940000155800.a.b.c ENSGT00950000183137.b.a.j ##22 ENSGT00940000160460 ENSGT00940000157235.k ENSGT00970000193500 ENSGT01060000248649 ENSGT00950000183054.a.a.a.a.g ENSGT00950000183027.b.b.f ENSGT00940000156337.c.h Huchen MODERN SPECIES 153 ENSHHUG00000047356 ENSHHUG00000047360 srl (ENSHHUG00000047365) ADCY9 (ENSHHUG00000047380) CREBBP (ENSHHUG00000047389) ENSHHUG00000047556 trap1 (ENSHHUG00000047559) ENSHHUG00000047564 GDE1 (ENSHHUG00000047565) ENSHHUG00000047567 PPARGC1A (ENSHHUG00000047574) ##22 ENSHHUG00000047576 gba3 (ENSHHUG00000047578) ADGRA3 (ENSHHUG00000047581) ENSHHUG00000047649 KCNIP4 (ENSHHUG00000047651) sec24d (ENSHHUG00000047666) ENSHHUG00000048027 MYOZ2 (ENSHHUG00000048029) USP53 (ENSHHUG00000048030) Salmoninae_a ANCESTRAL SPECIES 34 ENSGT00390000004438 ENSGT00530000062962.b.b ENSGT00730000111645.a.c ENSGT00530000063169.a.q ENSGT00990000214324 ENSGT00940000155397.a.b.g ENSGT00390000014293.a.d ENSGT00940000155429.a.a.a ENSGT00990000204039 ENSGT00940000156990 ENSGT00940000157772.d ENSGT00940000153289.a.a.b.d ENSGT00940000163471.a.f ENSGT00390000015958.d ENSGT00940000155800.a.b.c ENSGT00950000183137.b.a.j ##22 ENSGT00940000160460 ENSGT00940000157235.k ENSGT00970000193500 ENSGT01060000248649 ENSGT00950000183054.a.a.a.a.g ENSGT00950000183027.b.b.f ENSGT00940000156337.c.h ENSGT00940000153617.B.g ENSGT00940000155804.k.a.b ENSGT00530000063790.b.c ENSGT00940000155586.B.g.a ENSGT00940000155527.j.a.e.b ENSGT00940000154658.a.c ENSGT01090000260185.b ENSGT00940000156022.a.d Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 31 ENSGT00530000062962.b.b ENSGT00730000111645.a.c ENSGT00530000063169.a.q ENSGT00990000214324 ENSGT00940000155397.a.b.g ENSGT00390000014293.a.d ENSGT00940000161376 ENSGT00940000155429.a.a.a ENSGT00990000204039 ENSGT00940000156990 ENSGT00940000153289.a.a.b.d ENSGT00940000154308.D.c.a.b.b.a.a.a.b.a.b ENSGT01100000263495.A.a.b.b.a.a.b.b.b.b.b.b.a.b.a.a.a.b.b.a.b ENSGT00390000015958.d ENSGT00940000155800.a.b.c ENSGT00950000183137.b.a.j.a ##22 ENSGT00940000160460 ENSGT00940000157235.k ENSGT00970000193500 ENSGT00940000158985.f ENSGT00950000182924.A.b.a.b.g ENSGT00950000183054.a.a.a.a.g ENSGT00950000183027.b.b.f ENSGT00940000156337.c.h ENSGT00940000153617.B.g ENSGT00960000188752.b.a.a.b ENSGT00940000155804.k.a.b ENSGT00530000063790.b.c ENSGT00940000155586.B.g.a ENSGT00940000155527.j.a.e.b ENSGT00940000154658.a.c Rainbow trout MODERN SPECIES 30 hacd4 (ENSOMYG00000002160) ENSOMYG00000065315 ENSOMYG00000002143 ENSOMYG00000002125 ENSOMYG00000002116 slc1a1 (ENSOMYG00000002082) ENSOMYG00000001988 tspan5a (ENSOMYG00000001867) ENSOMYG00000001846 frem1a (ENSOMYG00000001711) ENSOMYG00000001575 ENSOMYG00000001522 ENSOMYG00000058832 ccdc149a (ENSOMYG00000045481) dhx15 (ENSOMYG00000045446) PPARGC1A (ENSOMYG00000074575) ##22 gba3 (ENSOMYG00000045420) ADGRA3 (ENSOMYG00000045348) ENSOMYG00000045316 KCNIP4 (ENSOMYG00000045307) sec24d (ENSOMYG00000044726) ENSOMYG00000044658 MYOZ2 (ENSOMYG00000044655) USP53 (ENSOMYG00000044651) ENSOMYG00000076736 ENSOMYG00000050015 PTPRD (ENSOMYG00000029183) ENSOMYG00000025863 TYRP1 (ENSOMYG00000025839) LURAP1L (ENSOMYG00000025827) MPDZ (ENSOMYG00000022089) Oncorhynchus_a ANCESTRAL SPECIES 30 ENSGT00530000062962.b.b ENSGT00730000111645.a.c ENSGT00530000063169.a.q ENSGT00990000214324 ENSGT00940000155397.a.b.g ENSGT00390000014293.a.d ENSGT00940000161376 ENSGT00940000155429.a.a.a ENSGT00990000204039 ENSGT00940000156990 ENSGT00940000153289.a.a.b.d ENSGT00940000154308.D.c.a.b.b.a.a.a.b.a.b ENSGT01100000263495.A.a.b.b.a.a.b.b.b.b.b.b.a.b.a.a.a.b.b.a.b ENSGT00390000015958.d ENSGT00940000155800.a.b.c ENSGT00950000183137.b.a.j.a ##22 ENSGT00940000160460 ENSGT00940000157235.k ENSGT00970000193500 ENSGT00940000158985.f ENSGT00950000182924.A.b.a.b.g ENSGT00950000183054.a.a.a.a.g ENSGT00950000183027.b.b.f ENSGT00940000156337.c.h ENSGT00940000153617.B.g ENSGT00960000188752.b.a.a.b ENSGT00940000155804.k.a.b ENSGT00530000063790.b.c ENSGT00940000155586.B.g.a ENSGT00940000155527.j.a.e.b ENSGT00940000154658.a.c Chinook salmon MODERN SPECIES 1 ENSOTSG00005047253 slc1a1 (ENSOTSG00005047237) RAP1GDS1 (ENSOTSG00005047234) tspan5a (ENSOTSG00005047233) ENSOTSG00005047231 frem1a (ENSOTSG00005047230) ENSOTSG00005047229 ENSOTSG00005047228 ENSOTSG00005047227 ENSOTSG00005047226 ENSOTSG00005047224 ENSOTSG00005047223 ENSOTSG00005047222 ccdc149a (ENSOTSG00005047219) dhx15 (ENSOTSG00005047193) PPARGC1A (ENSOTSG00005047184) ##22 gba3 (ENSOTSG00005047182) ADGRA3 (ENSOTSG00005047179) ENSOTSG00005047174 KCNIP4 (ENSOTSG00005047173) sec24d (ENSOTSG00005046997) ENSOTSG00005046991 MYOZ2 (ENSOTSG00005046989) USP53 (ENSOTSG00005046984) PTPRD (ENSOTSG00005024026) ENSOTSG00005023889 TYRP1 (ENSOTSG00005023884) MPDZ (ENSOTSG00005015616) cdk6 (ENSOTSG00005015574) ADGRL3 (ENSOTSG00005008372) ENSOTSG00005008304 Coho salmon MODERN SPECIES 7 hacd4 (ENSOKIG00005025014) C4orf54 (ENSOKIG00005025004) trmt10a (ENSOKIG00005024987) ENSOKIG00005024977 slc1a1 (ENSOKIG00005024458) RAP1GDS1 (ENSOKIG00005024358) ENSOKIG00005024316 ENSOKIG00005024300 frem1a (ENSOKIG00005023905) ENSOKIG00005023830 ENSOKIG00005023822 ENSOKIG00005023813 ENSOKIG00005023779 ccdc149a (ENSOKIG00005023735) dhx15 (ENSOKIG00005023620) PPARGC1A (ENSOKIG00005023592) ##22 ENSOKIG00005023589 ENSOKIG00005023583 gba3 (ENSOKIG00005023578) ADGRA3 (ENSOKIG00005023469) ENSOKIG00005023401 KCNIP4 (ENSOKIG00005023368) sec24d (ENSOKIG00005018397) SYNPO2 (ENSOKIG00005018225) MYOZ2 (ENSOKIG00005018208) USP53 (ENSOKIG00005018165) PTPRD (ENSOKIG00005017112) TYRP1 (ENSOKIG00005016952) LURAP1L (ENSOKIG00005016940) MPDZ (ENSOKIG00005010909) ADGRL3 (ENSOKIG00005006122) Oncorhynchus ANCESTRAL SPECIES ENSGT00950000183137.b.a.j.b ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00950000183137.b.a.j.b ##22 Chinook salmon MODERN SPECIES 6 DDIT4L (ENSOTSG00005047914) PPP3CA (ENSOTSG00005047806) NFIB (ENSOTSG00005047799) zdhhc21 (ENSOTSG00005047798) plaa (ENSOTSG00005047796) ACO1 (ENSOTSG00005047791) ENSOTSG00005047789 ACER2 (ENSOTSG00005047788) ENSOTSG00005047787 ENSOTSG00005047786 ENSOTSG00005047785 ENSOTSG00005047784 cyp3a65 (ENSOTSG00005047783) cyp3a65 (ENSOTSG00005047782) cyp3a65 (ENSOTSG00005047781) ENSOTSG00005047780 ##22 PPARGC1A (ENSOTSG00005047779) ##22 ADGRA3 (ENSOTSG00005047778) KCNIP4 (ENSOTSG00005047776) sec24d (ENSOTSG00005047761) SYNPO2 (ENSOTSG00005047760) MYOZ2 (ENSOTSG00005047759) USP53 (ENSOTSG00005047758) PTPRD (ENSOTSG00005033249) TYRP1 (ENSOTSG00005033164) LURAP1L (ENSOTSG00005033163) MPDZ (ENSOTSG00005027964) ENSOTSG00005027936 NEURL4 (ENSOTSG00005027659) ENSOTSG00005027655 ENSOTSG00005027653 Salmo ANCESTRAL SPECIES 18 ENSGT00730000111645.a.c ENSGT00530000063169.a.q ENSGT00990000214324 ENSGT00940000155397.a.b.g ENSGT00390000014293.a.d ENSGT00940000155429.a.a.a ENSGT00990000204039 ENSGT00940000156990 ENSGT00940000157772.d ENSGT00940000153289.a.a.b.d ENSGT00940000154308.D.c.a.b.b.a.a.a.b.a.b ENSGT00940000154308.D.c.a.b.a.a.a.a.a.b.a.a.a.a.a.a.b.b ENSGT00940000154308.D.c.a.b.a.b.a.b.a.a.a.b ENSGT00390000015958.d ENSGT00940000155800.a.b.c ENSGT00950000183137.b.a.j ##22 ENSGT00940000160460 ENSGT00940000157235.k ENSGT00940000162818.c.a.g.b ENSGT00940000158985.f ENSGT00950000182924.A.b.a.b.g ENSGT01060000248649 ENSGT00950000183054.a.a.a.a.g ENSGT00950000183027.b.b.f ENSGT00940000156337.c.h ENSGT00940000153617.B.g ENSGT00940000155804.k.a.b ENSGT00530000063790.b.c ENSGT00940000155586.B.g.a ENSGT00940000155527.j.a.e.b ENSGT00940000154658.a.c River trout MODERN SPECIES 35 trmt10a (ENSSTUG00000000926) ENSSTUG00000000935 slc1a1 (ENSSTUG00000000964) RAP1GDS1 (ENSSTUG00000001109) tspan5a (ENSSTUG00000001228) ENSSTUG00000001247 frem1a (ENSSTUG00000001292) ACO1 (ENSSTUG00000001546) ENSSTUG00000001695 ENSSTUG00000001697 ENSSTUG00000001729 ENSSTUG00000001748 ENSSTUG00000001763 ccdc149a (ENSSTUG00000001799) dhx15 (ENSSTUG00000002166) PPARGC1A (ENSSTUG00000002234) ##22 gba3 (ENSSTUG00000002255) ADGRA3 (ENSSTUG00000002273) ENSSTUG00000002450 KCNIP4 (ENSSTUG00000002478) SEC24C (ENSSTUG00000002697) SYNPO2 (ENSSTUG00000005339) ENSSTUG00000005351 USP53 (ENSSTUG00000005403) PTPRD (ENSSTUG00000005964) TYRP1 (ENSSTUG00000028684) LURAP1L (ENSSTUG00000028702) MPDZ (ENSSTUG00000028873) ADGRL3 (ENSSTUG00000033369) ENSSTUG00000040419 ENSSTUG00000040514 Atlantic salmon MODERN SPECIES 9 tspan5a (ENSSSAG00000065056) ENSSSAG00000065377 ENSSSAG00000116401 frem1 (ENSSSAG00000065397) ENSSSAG00000065501 ENSSSAG00000110548 ENSSSAG00000066501 ENSSSAG00000097914 ENSSSAG00000112040 ENSSSAG00000107458 ENSSSAG00000107855 ENSSSAG00000045968 ENSSSAG00000117349 ccdc149a (ENSSSAG00000066535) dhx15 (ENSSSAG00000067298) PPARGC1A (ENSSSAG00000108573) ##22 gba3 (ENSSSAG00000082579) ADGRA3 (ENSSSAG00000069698) KCNIP4 (ENSSSAG00000121775) ENSSSAG00000101838 sec24d (ENSSSAG00000069906) ENSSSAG00000110901 ENSSSAG00000074270 MYOZ2 (ENSSSAG00000074272) USP53 (ENSSSAG00000074275) PTPRD (ENSSSAG00000096916) tyrp-1 (ENSSSAG00000075543) LURAP1L (ENSSSAG00000122135) ENSSSAG00000075588 ENSSSAG00000076648 ENSSSAG00000079701 Northern pike MODERN SPECIES 23 ENSELUG00000016170 ENSELUG00000016183 ENSELUG00000031565 trmt10a (ENSELUG00000016190) spata6l (ENSELUG00000016212) slc1a1 (ENSELUG00000016268) RAP1GDS1 (ENSELUG00000016426) tspan5a (ENSELUG00000016547) ENSELUG00000016572 frem1a (ENSELUG00000016724) ACO1 (ENSELUG00000016812) ENSELUG00000016841 ACER2 (ENSELUG00000016895) ccdc149a (ENSELUG00000016931) dhx15 (ENSELUG00000016984) PPARGC1A (ENSELUG00000017027) ##22 gba3 (ENSELUG00000017046) ADGRA3 (ENSELUG00000000643) KCNIP4 (ENSELUG00000017200) sec24d (ENSELUG00000017252) SYNPO2 (ENSELUG00000017264) myoz2a (ENSELUG00000017272) USP53 (ENSELUG00000017340) PTPRD (ENSELUG00000017519) ENSELUG00000026202 TYRP1 (ENSELUG00000017554) LURAP1L (ENSELUG00000000688) MPDZ (ENSELUG00000017678) ADGRL3 (ENSELUG00000017939) ENSELUG00000026228 ENSELUG00000018451 Acanthomorphata ANCESTRAL SPECIES 174 ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a Euacanthomorphacea ANCESTRAL SPECIES 17 ENSGT00940000178140 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00390000007252.c ENSGT01030000236063 ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a Percomorphaceae ANCESTRAL SPECIES 18 ENSGT00940000156243 ENSGT00940000159642.e ENSGT00940000178140 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a Tiger tail seahorse MODERN SPECIES 479 ENSHCOG00000014650 ENSHCOG00000014656 ENSHCOG00000014667 ENSHCOG00000014685 ENSHCOG00000000410 sec24d (ENSHCOG00000014697) KCNIP4 (ENSHCOG00000014753) ENSHCOG00000014769 ADGRA3 (ENSHCOG00000014798) ccdc149a (ENSHCOG00000014815) ENSHCOG00000000415 PPARGC1A (ENSHCOG00000014886) ##22 gba3 (ENSHCOG00000014918) ENSHCOG00000014945 ENSHCOG00000014958 ENSHCOG00000014964 LARP7 (ENSHCOG00000000664) COL25A1 (ENSHCOG00000015024) etnppl (ENSHCOG00000015028) ostc (ENSHCOG00000015052) rpl34 (ENSHCOG00000015061) ENSHCOG00000015116 sepsecs (ENSHCOG00000015135) lgi2a (ENSHCOG00000000698) si:dkey-85k7.7 (ENSHCOG00000015177) tm4sf5 (ENSHCOG00000015193) ENSHCOG00000000421 Percomorphaceae_B ANCESTRAL SPECIES 19 ENSGT00940000178140 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00650000094787 ENSGT00940000165054.C.e.a ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00980000202414 ENSGT00940000154658.a Ovalentaria ANCESTRAL SPECIES 20 ENSGT00940000159642.e ENSGT00940000178140 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00650000094787 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a Ovalentaria_B ANCESTRAL SPECIES 19 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00650000094787.d ENSGT00940000165054.C.f ENSGT00650000094787.c ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a Pomacentridae ANCESTRAL SPECIES 28 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a.e ENSGT00940000154658.a.f ENSGT00390000017010 Pomacentridae_A ANCESTRAL SPECIES 22 ENSGT00940000156243 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f.a ENSGT00940000165054.C.f.b ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a.f ENSGT00390000017010 Amphiprion ANCESTRAL SPECIES 96 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f.a ENSGT00940000165054.C.f.b ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000162226.b ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a.f Clown anemonefish MODERN SPECIES 1368 ostc (ENSAOCG00000006451) rpl34 (ENSAOCG00000006471) SLC24A2 (ENSAOCG00000006517) sepsecs (ENSAOCG00000000315) lgi2a (ENSAOCG00000006594) ENSAOCG00000006611 ENSAOCG00000006622 ccdc149a (ENSAOCG00000006644) ENSAOCG00000006690 PPARGC1A (ENSAOCG00000006754) ##22 gba3 (ENSAOCG00000006768) Orange clownfish MODERN SPECIES 15 ENSAPEG00000021962 DENND4C (ENSAPEG00000022009) ENSAPEG00000022147 plin2 (ENSAPEG00000022161) ELP1 (ENSAPEG00000022178) ENSAPEG00000022222 ostc (ENSAPEG00000022258) rpl34 (ENSAPEG00000022292) SLC24A2 (ENSAPEG00000022322) sepsecs (ENSAPEG00000022364) lgi2a (ENSAPEG00000022430) ENSAPEG00000022445 ENSAPEG00000022456 ccdc149a (ENSAPEG00000022469) ENSAPEG00000022503 PPARGC1A (ENSAPEG00000022574) ##22 gba3 (ENSAPEG00000022624) ADGRA3 (ENSAPEG00000022637) ENSAPEG00000022657 ENSAPEG00000022664 KCNIP4 (ENSAPEG00000022684) sec24d (ENSAPEG00000022743) ENSAPEG00000022778 myoz2a (ENSAPEG00000022815) USP53 (ENSAPEG00000022822) PTPRD (ENSAPEG00000022919) TYRP1 (ENSAPEG00000023168) LURAP1L (ENSAPEG00000023192) ENSAPEG00000023197 ENSAPEG00000023207 ENSAPEG00000023222 Spiny chromis MODERN SPECIES 249 ENSAPOG00000018719 ENSAPOG00000018674 ccdc149a (ENSAPOG00000018658) ENSAPOG00000018637 PPARGC1A (ENSAPOG00000018632) ##22 gba3 (ENSAPOG00000018548) ADGRA3 (ENSAPOG00000018540) Bicolor damselfish MODERN SPECIES 875 PPARGC1A (ENSSPAG00000023514) ##22 gba3 (ENSSPAG00000023510) ADGRA3 (ENSSPAG00000023508) Cichlidae ANCESTRAL SPECIES 20 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910.a ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 Pseudocrenilabrinae ANCESTRAL SPECIES 18 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910.a ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f.c.b.a ENSGT00650000094787.c.a ENSGT00940000165054.C.f.c.a ENSGT00940000165054.C.f.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 Nile tilapia MODERN SPECIES 15 plin2 (ENSONIG00000008770) ADAMTSL1 (ENSONIG00000008766) ENSONIG00000033929 larp7 (ENSONIG00000008763) COL25A1 (ENSONIG00000008760) etnppl (ENSONIG00000008754) ostc (ENSONIG00000037519) ENSONIG00000008774 rpl34 (ENSONIG00000038178) SLC24A2 (ENSONIG00000008752) sepsecs (ENSONIG00000008744) lgi2a (ENSONIG00000040285) ENSONIG00000039847 ccdc149a (ENSONIG00000028055) ENSONIG00000007642 PPARGC1A (ENSONIG00000007635) ##22 gba3 (ENSONIG00000007634) ADGRA3 (ENSONIG00000036115) KCNIP4 (ENSONIG00000041474) sec24d (ENSONIG00000007619) SYNPO2 (ENSONIG00000032796) myoz2a (ENSONIG00000007614) USP53 (ENSONIG00000007612) PTPRD (ENSONIG00000007588) TYRP1 (ENSONIG00000007584) LURAP1L (ENSONIG00000007582) MPDZ (ENSONIG00000007574) ADGRL3 (ENSONIG00000007571) ENSONIG00000028332 ENSONIG00000007557 ENSONIG00000030865 Pseudocrenilabrinae_A ANCESTRAL SPECIES 23 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910.a ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f.c.b.a ENSGT00650000094787.c.a ENSGT00940000165054.C.f.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 Haplochromini ANCESTRAL SPECIES 31 ENSGT00940000165054.C.f.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 Haplochromini_A ANCESTRAL SPECIES 35 ENSGT00940000165054.C.f.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 P. nyererei MODERN SPECIES 421 ENSPNYG00000006337 ENSPNYG00000006753 ccdc149a (ENSPNYG00000006765) ENSPNYG00000006790 PPARGC1A (ENSPNYG00000006846) ##22 gba3 (ENSPNYG00000006891) ADGRA3 (ENSPNYG00000006906) KCNIP4 (ENSPNYG00000006925) sec24d (ENSPNYG00000006950) ENSPNYG00000006966 myoz2a (ENSPNYG00000006977) ENSPNYG00000007004 PTPRD (ENSPNYG00000007040) TYRP1 (ENSPNYG00000007139) LURAP1L (ENSPNYG00000007165) MPDZ (ENSPNYG00000007185) ADGRL3 (ENSPNYG00000007344) Haplochromini_B ANCESTRAL SPECIES 25 ENSGT00940000156243.lb ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910.a ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f.c.b.a.a ENSGT00650000094787.c.a ENSGT00940000165054.C.f.c.a.a.a ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 Eastern happy MODERN SPECIES 15 rpl34 (ENSACLG00000023428) SLC24A2 (ENSACLG00000000199) sepsecs (ENSACLG00000000375) lgi2a (ENSACLG00000000457) ENSACLG00000000482 ENSACLG00000000489 ENSACLG00000000497 ENSACLG00000000564 ENSACLG00000000580 ENSACLG00000000661 ccdc149a (ENSACLG00000000669) ENSACLG00000000717 ENSACLG00000000737 ENSACLG00000000749 ENSACLG00000000765 PPARGC1A (ENSACLG00000001002) ##22 gba3 (ENSACLG00000001126) ADGRA3 (ENSACLG00000001140) KCNIP4 (ENSACLG00000001315) sec24d (ENSACLG00000001362) ENSACLG00000001403 myoz2a (ENSACLG00000001413) USP53 (ENSACLG00000001439) PTPRD (ENSACLG00000001550) TYRP1 (ENSACLG00000001942) LURAP1L (ENSACLG00000001998) MPDZ (ENSACLG00000002011) ADGRL3 (ENSACLG00000002240) ENSACLG00000002311 ENSACLG00000002328 CAAP1 (ENSACLG00000002613) Zebra mbuna MODERN SPECIES 1106 ENSMZEG00005002072 etnppl (ENSMZEG00005002019) ostc (ENSMZEG00005002057) rpl34 (ENSMZEG00005001997) SLC24A2 (ENSMZEG00005001969) sepsecs (ENSMZEG00005001940) lgi2a (ENSMZEG00005001904) ENSMZEG00005001891 ENSMZEG00005001871 ENSMZEG00005001859 ENSMZEG00005001849 ENSMZEG00005001840 ENSMZEG00005001823 ccdc149a (ENSMZEG00005001812) ENSMZEG00005001757 PPARGC1A (ENSMZEG00005001739) ##22 ENSMZEG00005001709 gba3 (ENSMZEG00005001698) ADGRA3 (ENSMZEG00005001689) KCNIP4 (ENSMZEG00005001667) sec24d (ENSMZEG00005001595) ENSMZEG00005001547 myoz2a (ENSMZEG00005001520) USP53 (ENSMZEG00005001507) PTPRD (ENSMZEG00005001243) ENSMZEG00005001208 TYRP1 (ENSMZEG00005001187) LURAP1L (ENSMZEG00005001183) MPDZ (ENSMZEG00005001094) ADGRL3 (ENSMZEG00005001028) ENSMZEG00005000817 Burton s mouthbrooder MODERN SPECIES 451 ccdc149a (ENSHBUG00000005103) ENSHBUG00000005166 PPARGC1A (ENSHBUG00000005269) ##22 gba3 (ENSHBUG00000005285) ADGRA3 (ENSHBUG00000005294) KCNIP4 (ENSHBUG00000005352) sec24d (ENSHBUG00000000141) ENSHBUG00000005763 myoz2a (ENSHBUG00000005777) ENSHBUG00000005804 PTPRD (ENSHBUG00000005922) Lyretail cichlid MODERN SPECIES 406 ENSNBRG00000023355 ccdc149a (ENSNBRG00000023359) ENSNBRG00000023387 PPARGC1A (ENSNBRG00000023403) ##22 gba3 (ENSNBRG00000023414) ADGRA3 (ENSNBRG00000023430) KCNIP4 (ENSNBRG00000023439) sec24d (ENSNBRG00000023448) ENSNBRG00000023471 myoz2a (ENSNBRG00000023482) ENSNBRG00000023490 PTPRD (ENSNBRG00000023501) TYRP1 (ENSNBRG00000023511) LURAP1L (ENSNBRG00000023518) MPDZ (ENSNBRG00000023524) ENSNBRG00000023536 ENSNBRG00000023541 Midas cichlid MODERN SPECIES 793 ccdc149a (ENSACIG00000009651) dhx15 (ENSACIG00000009701) PPARGC1A (ENSACIG00000009732) ##22 gba3 (ENSACIG00000009785) ADGRA3 (ENSACIG00000009827) KCNIP4 (ENSACIG00000009882) sec24d (ENSACIG00000009914) SYNPO2 (ENSACIG00000010161) myoz2a (ENSACIG00000010197) USP53 (ENSACIG00000010321) PTPRD (ENSACIG00000010385) TYRP1 (ENSACIG00000010444) LURAP1L (ENSACIG00000010470) MPDZ (ENSACIG00000010482) ADGRL3 (ENSACIG00000010583) ENSACIG00000010635 CAAP1 (ENSACIG00000010733) elavl2 (ENSACIG00000010855) Atherinomorphae ANCESTRAL SPECIES 22 ENSGT00940000156243 ENSGT00940000159642.e ENSGT00940000178140 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 Cyprinodontiformes ANCESTRAL SPECIES 22 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e Aplocheiloidei ANCESTRAL SPECIES 65 ENSGT00940000158215 ENSGT00390000005970 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e Mangrove rivulus MODERN SPECIES 29 ENSKMAG00000004722 rpl34 (ENSKMAG00000004831) ostc (ENSKMAG00000004843) etnppl (ENSKMAG00000004865) COL25A1 (ENSKMAG00000004934) larp7 (ENSKMAG00000005057) ENSKMAG00000005074 ENSKMAG00000005088 plin2 (ENSKMAG00000005106) ENSKMAG00000005127 DENND4C (ENSKMAG00000005171) sepsecs (ENSKMAG00000005232) lgi2a (ENSKMAG00000005285) ccdc149a (ENSKMAG00000005321) ENSKMAG00000005335 PPARGC1A (ENSKMAG00000005390) ##22 ENSKMAG00000005471 gba3 (ENSKMAG00000005482) ADGRA3 (ENSKMAG00000005518) KCNIP4 (ENSKMAG00000005612) ENSKMAG00000005659 sec24d (ENSKMAG00000005695) ENSKMAG00000005720 myoz2a (ENSKMAG00000005757) USP53 (ENSKMAG00000005777) PTPRD (ENSKMAG00000005817) TYRP1 (ENSKMAG00000005890) LURAP1L (ENSKMAG00000005922) MPDZ (ENSKMAG00000005956) ADGRL3 (ENSKMAG00000006060) ENSKMAG00000006133 Turquoise killifish MODERN SPECIES 1613 TCF21 (ENSNFUG00015024370) TBPL1 (ENSNFUG00015024368) slc2a12 (ENSNFUG00015024362) SGK1 (ENSNFUG00015024306) aldh8a1 (ENSNFUG00015024296) ENSNFUG00015024289 HBS1L (ENSNFUG00015023786) CMYB (ENSNFUG00015023707) ENSNFUG00015023702 PDE7B (ENSNFUG00015023665) ENSNFUG00015023654 CCDC149A (ENSNFUG00015023552) DHX15 (ENSNFUG00015023530) ENSNFUG00015023526 ENSNFUG00015023524 PPARGC1A (ENSNFUG00015023520) ##22 gba3 (ENSNFUG00015023515) GPR125 (ENSNFUG00015023499) ENSNFUG00015023471 ENSNFUG00015023463 ENSNFUG00015023461 KCNIP4 (ENSNFUG00015023456) sec24d (ENSNFUG00015023311) SYNPO2 (ENSNFUG00015023296) myoz2a (ENSNFUG00015023294) ENSNFUG00015023290 ENSNFUG00015023288 ENSNFUG00015023287 ENSNFUG00015023285 ENSNFUG00015023284 ENSNFUG00015023282 Cyprinodontoidei ANCESTRAL SPECIES 21 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e NAME_4 ANCESTRAL SPECIES 89 ENSGT00390000005970 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B Mummichog MODERN SPECIES 2216 DENND4C (ENSFHEG00000021547) ENSFHEG00000021560 plin2 (ENSFHEG00000021574) ENSFHEG00000021598 ENSFHEG00000021613 ENSFHEG00000021639 larp7 (ENSFHEG00000021652) etnppl (ENSFHEG00000021689) ostc (ENSFHEG00000021712) rpl34 (ENSFHEG00000021729) ENSFHEG00000021776 sepsecs (ENSFHEG00000021820) lgi2a (ENSFHEG00000021844) ccdc149a (ENSFHEG00000021883) ENSFHEG00000021899 PPARGC1A (ENSFHEG00000021990) ##22 ENSFHEG00000021999 ADGRA3 (ENSFHEG00000022017) KCNIP4 (ENSFHEG00000022030) ENSFHEG00000022077 myoz2a (ENSFHEG00000022088) USP53 (ENSFHEG00000022100) PTPRD (ENSFHEG00000022220) Sheepshead minnow MODERN SPECIES 263 ADAMTSL1 (ENSCVAG00000016926) ENSCVAG00000016863 larp7 (ENSCVAG00000016852) etnppl (ENSCVAG00000016759) ostc (ENSCVAG00000016750) rpl34 (ENSCVAG00000016732) ENSCVAG00000016715 sepsecs (ENSCVAG00000016650) lgi2a (ENSCVAG00000016620) ENSCVAG00000016590 ccdc149a (ENSCVAG00000016580) ENSCVAG00000000873 PPARGC1A (ENSCVAG00000016547) ##22 gba3 (ENSCVAG00000016477) Poeciliinae ANCESTRAL SPECIES 21 ENSGT00940000156243 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00650000094787 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e Poecilia ANCESTRAL SPECIES 48 ENSGT00940000156243 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00650000094787 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e NAME_6 ANCESTRAL SPECIES 167 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B Amazon molly MODERN SPECIES 361 plin2 (ENSPFOG00000000129) ADAMTSL1 (ENSPFOG00000000171) ENSPFOG00000000245 larp7 (ENSPFOG00000000265) ENSPFOG00000000314 COL25A1 (ENSPFOG00000000329) etnppl (ENSPFOG00000022180) ostc (ENSPFOG00000000415) rpl34 (ENSPFOG00000000440) ENSPFOG00000000476 sepsecs (ENSPFOG00000000629) lgi2a (ENSPFOG00000000752) ENSPFOG00000000794 ccdc149a (ENSPFOG00000000819) ENSPFOG00000000949 PPARGC1A (ENSPFOG00000001263) ##22 gba3 (ENSPFOG00000001505) ADGRA3 (ENSPFOG00000001638) KCNIP4 (ENSPFOG00000001854) sec24d (ENSPFOG00000002059) ENSPFOG00000002529 myoz2a (ENSPFOG00000002591) USP53 (ENSPFOG00000002651) PTPRD (ENSPFOG00000002724) Sailfin molly MODERN SPECIES 197 etnppl (ENSPLAG00000002987) ostc (ENSPLAG00000002963) rpl34 (ENSPLAG00000002943) ENSPLAG00000002935 sepsecs (ENSPLAG00000000813) lgi2a (ENSPLAG00000002899) ENSPLAG00000002885 ccdc149a (ENSPLAG00000002874) ENSPLAG00000002863 PPARGC1A (ENSPLAG00000002827) ##22 gba3 (ENSPLAG00000002810) ADGRA3 (ENSPLAG00000002802) Guppy MODERN SPECIES 448 plin2 (ENSPREG00000019580) ENSPREG00000019569 ENSPREG00000019555 ENSPREG00000019534 larp7 (ENSPREG00000019513) etnppl (ENSPREG00000019475) ostc (ENSPREG00000019453) rpl34 (ENSPREG00000019431) SLC24A2 (ENSPREG00000019395) sepsecs (ENSPREG00000019358) lgi2a (ENSPREG00000019332) ENSPREG00000019312 ENSPREG00000019297 ccdc149a (ENSPREG00000019271) ENSPREG00000019256 PPARGC1A (ENSPREG00000019171) ##22 gba3 (ENSPREG00000019133) ADGRA3 (ENSPREG00000019098) KCNIP4 (ENSPREG00000018931) sec24d (ENSPREG00000018869) ENSPREG00000018845 myoz2a (ENSPREG00000018830) USP53 (ENSPREG00000018805) PTPRD (ENSPREG00000018440) TYRP1 (ENSPREG00000018301) LURAP1L (ENSPREG00000018293) ENSPREG00000017839 ADGRL3 (ENSPREG00000017398) ENSPREG00000017212 CAAP1 (ENSPREG00000017188) elavl2 (ENSPREG00000017160) Platyfish MODERN SPECIES 5 haus6 (ENSXMAG00000029941) DENND4C (ENSXMAG00000008498) plin2 (ENSXMAG00000008491) ENSXMAG00000026993 ADAMTSL1 (ENSXMAG00000008488) ENSXMAG00000008487 larp7 (ENSXMAG00000008479) etnppl (ENSXMAG00000028512) ostc (ENSXMAG00000025929) ENSXMAG00000008464 sepsecs (ENSXMAG00000008452) lgi2a (ENSXMAG00000008444) ENSXMAG00000027969 ccdc149a (ENSXMAG00000008441) dhx15 (ENSXMAG00000008425) PPARGC1A (ENSXMAG00000007748) ##22 gba3 (ENSXMAG00000007766) ADGRA3 (ENSXMAG00000007771) KCNIP4 (ENSXMAG00000001979) sec24d (ENSXMAG00000001944) ENSXMAG00000001940 myoz2a (ENSXMAG00000023576) USP53 (ENSXMAG00000021530) PTPRD (ENSXMAG00000004920) ENSXMAG00000028029 TYRP1 (ENSXMAG00000004910) LURAP1L (ENSXMAG00000004908) ENSXMAG00000027724 MPDZ (ENSXMAG00000004907) ADGRL3 (ENSXMAG00000004882) ENSXMAG00000004781 Oryzias ANCESTRAL SPECIES 21 ENSGT00940000156243 ENSGT00940000159642.e ENSGT00940000178140 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 Oryzias_a ANCESTRAL SPECIES 27 ENSGT00940000156243 ENSGT00940000159642.e ENSGT00940000178140 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00980000202414 ENSGT00940000154658.a.g ENSGT00940000154658.a.h Japanese Medaka HdrR MODERN SPECIES 9 ENSORLG00000021989 ENSORLG00000005000 ENSORLG00000022811 ENSORLG00000027637 larp7 (ENSORLG00000004978) COL25A1 (ENSORLG00000004934) etnppl (ENSORLG00000004922) ostc (ENSORLG00000004900) rpl34 (ENSORLG00000004887) SLC24A2 (ENSORLG00000004872) sepsecs (ENSORLG00000004861) lgi2a (ENSORLG00000004842) ENSORLG00000025218 ccdc149a (ENSORLG00000004829) ENSORLG00000004819 PPARGC1A (ENSORLG00000004788) ##22 gba3 (ENSORLG00000004780) ADGRA3 (ENSORLG00000004767) ENSORLG00000023209 KCNIP4 (ENSORLG00000004748) sec24d (ENSORLG00000004729) SYNPO2 (ENSORLG00000028437) myoz2a (ENSORLG00000025044) USP53 (ENSORLG00000004686) ENSORLG00000022754 PTPRD (ENSORLG00000004650) TYRP1 (ENSORLG00000004326) LURAP1L (ENSORLG00000028081) MPDZ (ENSORLG00000004290) ADGRL3 (ENSORLG00000004254) ENSORLG00000023983 Chinese medaka MODERN SPECIES 335 ENSOSIG00000017652 plin2 (ENSOSIG00000017655) ENSOSIG00000017666 ENSOSIG00000017669 larp7 (ENSOSIG00000017676) ENSOSIG00000017680 COL25A1 (ENSOSIG00000017705) ostc (ENSOSIG00000017716) rpl34 (ENSOSIG00000017720) SLC24A2 (ENSOSIG00000017737) sepsecs (ENSOSIG00000017745) lgi2a (ENSOSIG00000017781) ENSOSIG00000017783 ccdc149a (ENSOSIG00000017803) ENSOSIG00000017891 PPARGC1A (ENSOSIG00000017996) ##22 gba3 (ENSOSIG00000018001) ADGRA3 (ENSOSIG00000018085) KCNIP4 (ENSOSIG00000018864) sec24d (ENSOSIG00000018989) SYNPO2 (ENSOSIG00000020993) ENSOSIG00000021000 USP53 (ENSOSIG00000021007) Oryzias_b ANCESTRAL SPECIES 18 ENSGT00390000005970 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT00940000159642.e ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e Indian medaka MODERN SPECIES 19 ENSOMEG00000007048 ENSOMEG00000007016 ENSOMEG00000006961 ENSOMEG00000006939 larp7 (ENSOMEG00000006920) COL25A1 (ENSOMEG00000006833) etnppl (ENSOMEG00000006448) ostc (ENSOMEG00000006412) rpl34 (ENSOMEG00000006389) SLC24A2 (ENSOMEG00000006308) sepsecs (ENSOMEG00000006218) lgi2a (ENSOMEG00000006174) ENSOMEG00000006152 ccdc149a (ENSOMEG00000006119) ENSOMEG00000006075 PPARGC1A (ENSOMEG00000000670) ##22 gba3 (ENSOMEG00000005946) ADGRA3 (ENSOMEG00000005915) KCNIP4 (ENSOMEG00000005776) sec24d (ENSOMEG00000005678) ENSOMEG00000005638 myoz2a (ENSOMEG00000005628) ENSOMEG00000005608 PTPRD (ENSOMEG00000005568) TYRP1 (ENSOMEG00000005449) LURAP1L (ENSOMEG00000005431) MPDZ (ENSOMEG00000005411) ADGRL3 (ENSOMEG00000005355) ENSOMEG00000005308 CAAP1 (ENSOMEG00000005226) elavl2 (ENSOMEG00000005178) Javanese ricefish MODERN SPECIES 9 ENSOJAG00000012873 plin2 (ENSOJAG00000012882) ENSOJAG00000012891 ENSOJAG00000012900 larp7 (ENSOJAG00000012909) ENSOJAG00000012922 etnppl (ENSOJAG00000012942) ostc (ENSOJAG00000013035) rpl34 (ENSOJAG00000013084) SLC24A2 (ENSOJAG00000013120) sepsecs (ENSOJAG00000013136) lgi2a (ENSOJAG00000013212) ENSOJAG00000013236 ccdc149a (ENSOJAG00000013251) ENSOJAG00000013382 PPARGC1A (ENSOJAG00000013648) ##22 gba3 (ENSOJAG00000013665) ADGRA3 (ENSOJAG00000013743) KCNIP4 (ENSOJAG00000014582) sec24d (ENSOJAG00000014803) SYNPO2 (ENSOJAG00000017001) myoz2a (ENSOJAG00000017040) USP53 (ENSOJAG00000017053) PTPRD (ENSOJAG00000017841) ENSOJAG00000023091 TYRP1 (ENSOJAG00000023096) LURAP1L (ENSOJAG00000023101) ADGRL3 (ENSOJAG00000023481) ENSOJAG00000023853 ENSOJAG00000023915 CAAP1 (ENSOJAG00000023918) Percomorphaceae_C ANCESTRAL SPECIES 20 ENSGT00940000178140 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00650000094787 ENSGT00940000165054.C.e.a ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ENSGT00980000202414 ENSGT00940000154658.a Percomorphaceae_D ANCESTRAL SPECIES 20 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a Anabantaria ANCESTRAL SPECIES 19 ENSGT00390000005970 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ENSGT00980000202414 ENSGT00940000154658.a Anabantoidei ANCESTRAL SPECIES 24 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT01030000236063 ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ENSGT00980000202414 ENSGT00940000154658.a Climbing perch MODERN SPECIES 9 ENSATEG00000016165 ENSATEG00000016224 ENSATEG00000016238 ENSATEG00000027750 COL25A1 (ENSATEG00000029427) ENSATEG00000029379 ETNPPL (ENSATEG00000016261) OSTC (ENSATEG00000016319) RPL34 (ENSATEG00000016338) ENSATEG00000016363 sepsecs (ENSATEG00000016442) lgi2a (ENSATEG00000028171) ENSATEG00000016497 ccdc149a (ENSATEG00000016582) ENSATEG00000016651 PPARGC1A (ENSATEG00000016702) ##22 gba3 (ENSATEG00000016764) ADGRA3 (ENSATEG00000016776) KCNIP4 (ENSATEG00000016803) sec24d (ENSATEG00000016860) SYNPO2 (ENSATEG00000017221) myoz2a (ENSATEG00000017228) USP53 (ENSATEG00000017245) PTPRD (ENSATEG00000017283) TYRP1 (ENSATEG00000017446) LURAP1L (ENSATEG00000017466) ENSATEG00000026345 MPDZ (ENSATEG00000017540) ENSATEG00000017807 ENSATEG00000028927 ENSATEG00000017971 Siamese fighting fish MODERN SPECIES 10 ENSBSLG00000018242 ENSBSLG00000018223 ENSBSLG00000018195 ENSBSLG00000018154 ENSBSLG00000018152 ENSBSLG00000018150 ENSBSLG00000018149 ENSBSLG00000018147 ENSBSLG00000018146 ENSBSLG00000018144 ENSBSLG00000018138 ENSBSLG00000018134 ENSBSLG00000018124 ccdc149a (ENSBSLG00000018107) ENSBSLG00000018041 PPARGC1A (ENSBSLG00000017998) ##22 gba3 (ENSBSLG00000017992) ADGRA3 (ENSBSLG00000017720) KCNIP4 (ENSBSLG00000017625) sec24d (ENSBSLG00000015555) SYNPO2 (ENSBSLG00000015420) myoz2a (ENSBSLG00000015413) USP53 (ENSBSLG00000015366) ENSBSLG00000015352 PTPRD (ENSBSLG00000004441) LURAP1L (ENSBSLG00000003235) MPDZ (ENSBSLG00000002122) ENSBSLG00000002092 ADGRL3 (ENSBSLG00000001907) ENSBSLG00000001323 CAAP1 (ENSBSLG00000001197) Zig-zag eel MODERN SPECIES 9 ENSMAMG00000005941 ENSMAMG00000005928 ENSMAMG00000028671 ENSMAMG00000005846 ENSMAMG00000005835 ETNPPL (ENSMAMG00000005807) ENSMAMG00000005796 RPL34 (ENSMAMG00000005765) ENSMAMG00000005661 sepsecs (ENSMAMG00000005628) lgi2a (ENSMAMG00000024529) ENSMAMG00000005604 ENSMAMG00000026600 ccdc149a (ENSMAMG00000005569) ENSMAMG00000005544 PPARGC1A (ENSMAMG00000005531) ##22 gba3 (ENSMAMG00000005526) ADGRA3 (ENSMAMG00000005447) KCNIP4 (ENSMAMG00000005426) sec24d (ENSMAMG00000005409) SYNPO2 (ENSMAMG00000005405) myoz2a (ENSMAMG00000005400) USP53 (ENSMAMG00000005390) PTPRD (ENSMAMG00000005311) TYRP1 (ENSMAMG00000005278) LURAP1L (ENSMAMG00000005271) MPDZ (ENSMAMG00000005182) ENSMAMG00000005041 ENSMAMG00000004862 CAAP1 (ENSMAMG00000004841) ENSMAMG00000004829 Carangaria ANCESTRAL SPECIES 20 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 Carangaria_A ANCESTRAL SPECIES 32 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT01030000236063 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.e.a ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 Seriola ANCESTRAL SPECIES 92 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT01030000236063 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.e.a ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 Greater amberjack MODERN SPECIES 104 plin2 (ENSSDUG00000006963) ENSSDUG00000006980 ENSSDUG00000007005 ENSSDUG00000007032 larp7 (ENSSDUG00000007045) ENSSDUG00000007084 etnppl (ENSSDUG00000007097) ostc (ENSSDUG00000007161) rpl34 (ENSSDUG00000007177) ENSSDUG00000007207 sepsecs (ENSSDUG00000007238) lgi2a (ENSSDUG00000007275) ENSSDUG00000007315 ccdc149a (ENSSDUG00000007338) ENSSDUG00000007372 PPARGC1A (ENSSDUG00000007408) ##22 ADGRA3 (ENSSDUG00000007460) gba3 (ENSSDUG00000007517) KCNIP4 (ENSSDUG00000007532) sec24d (ENSSDUG00000007582) SYNPO2 (ENSSDUG00000007614) myoz2a (ENSSDUG00000007627) USP53 (ENSSDUG00000007643) PTPRD (ENSSDUG00000007674) ENSSDUG00000007762 TYRP1 (ENSSDUG00000007769) LURAP1L (ENSSDUG00000007782) MPDZ (ENSSDUG00000007803) ADGRL3 (ENSSDUG00000007904) ENSSDUG00000007944 ENSSDUG00000007974 Yellowtail amberjack MODERN SPECIES 3028 ENSSLDG00000006883 ENSSLDG00000006896 ccdc149a (ENSSLDG00000006908) ENSSLDG00000006937 PPARGC1A (ENSSLDG00000006987) ##22 gba3 (ENSSLDG00000007033) ADGRA3 (ENSSLDG00000007055) KCNIP4 (ENSSLDG00000007147) sec24d (ENSSLDG00000007259) SYNPO2 (ENSSLDG00000007325) myoz2a (ENSSLDG00000007340) USP53 (ENSSLDG00000007359) PTPRD (ENSSLDG00000007511) TYRP1 (ENSSLDG00000007913) LURAP1L (ENSSLDG00000007937) MPDZ (ENSSLDG00000007978) ADGRL3 (ENSSLDG00000008084) ENSSLDG00000008148 ENSSLDG00000008240 CAAP1 (ENSSLDG00000008437) Barramundi perch MODERN SPECIES 17 ADAMTSL1 (ENSLCAG00010017109) ENSLCAG00010017106 larp7 (ENSLCAG00010017103) ENSLCAG00010017099 etnppl (ENSLCAG00010017071) ostc (ENSLCAG00010017065) rpl34 (ENSLCAG00010017061) SLC24A2 (ENSLCAG00010017053) sepsecs (ENSLCAG00010017044) lgi2a (ENSLCAG00010017037) ENSLCAG00010017036 ENSLCAG00010017035 ENSLCAG00010017032 ccdc149a (ENSLCAG00010017029) ENSLCAG00010017007 PPARGC1A (ENSLCAG00010017001) ##22 gba3 (ENSLCAG00010017000) ADGRA3 (ENSLCAG00010016996) KCNIP4 (ENSLCAG00010016993) sec24d (ENSLCAG00010016774) SYNPO2 (ENSLCAG00010016710) myoz2a (ENSLCAG00010016708) USP53 (ENSLCAG00010016704) PTPRD (ENSLCAG00010016357) TYRP1 (ENSLCAG00010016274) LURAP1L (ENSLCAG00010016272) MPDZ (ENSLCAG00010016203) ADGRL3 (ENSLCAG00010015142) ENSLCAG00010014177 CAAP1 (ENSLCAG00010014034) SLC45A4 (ENSLCAG00010014030) Pleuronectoidei ANCESTRAL SPECIES 17 ENSGT00390000005970 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT00940000159642.e ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e Turbot MODERN SPECIES 11 ENSSMAG00000011239 ENSSMAG00000011259 ENSSMAG00000011296 COL25A1 (ENSSMAG00000011318) ETNPPL (ENSSMAG00000011357) OSTC (ENSSMAG00000025611) RPL34 (ENSSMAG00000011388) ENSSMAG00000011402 sepsecs (ENSSMAG00000011444) lgi2a (ENSSMAG00000011472) ENSSMAG00000011493 ENSSMAG00000032501 ccdc149a (ENSSMAG00000011517) ENSSMAG00000011559 ENSSMAG00000036898 PPARGC1A (ENSSMAG00000011571) ##22 ENSSMAG00000011635 gba3 (ENSSMAG00000011641) ADGRA3 (ENSSMAG00000011652) KCNIP4 (ENSSMAG00000009912) sec24d (ENSSMAG00000009962) SYNPO2 (ENSSMAG00000009992) myoz2a (ENSSMAG00000010051) ENSSMAG00000010060 PTPRD (ENSSMAG00000010085) TYRP1 (ENSSMAG00000010205) LURAP1L (ENSSMAG00000010216) MPDZ (ENSSMAG00000010226) ENSSMAG00000010310 ENSSMAG00000010548 CAAP1 (ENSSMAG00000010726) Tongue sole MODERN SPECIES plin2 (ENSCSEG00000009156) ENSCSEG00000009178 ENSCSEG00000009122 ENSCSEG00000009103 ENSCSEG00000009092 larp7 (ENSCSEG00000009088) ENSCSEG00000008890 etnppl (ENSCSEG00000007057) ostc (ENSCSEG00000007086) rpl34 (ENSCSEG00000007040) ENSCSEG00000007006 sepsecs (ENSCSEG00000006978) lgi2a (ENSCSEG00000006962) ccdc149a (ENSCSEG00000006946) ENSCSEG00000006920 PPARGC1A (ENSCSEG00000006884) ##22 gba3 (ENSCSEG00000006878) ENSCSEG00000006872 ADGRA3 (ENSCSEG00000006830) KCNIP4 (ENSCSEG00000006784) sec24d (ENSCSEG00000006764) SYNPO2 (ENSCSEG00000006762) myoz2a (ENSCSEG00000006757) USP53 (ENSCSEG00000006719) PTPRD (ENSCSEG00000006693) ENSCSEG00000006686 TYRP1 (ENSCSEG00000006672) LURAP1L (ENSCSEG00000006665) MPDZ (ENSCSEG00000006527) ADGRL3 (ENSCSEG00000006436) ENSCSEG00000006362 Eupercaria ANCESTRAL SPECIES 19 ENSGT00940000159642.e ENSGT00940000178140 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00650000094787 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ENSGT00980000202414 ENSGT00940000154658.a Eupecaria_A ANCESTRAL SPECIES 20 ENSGT00940000159642.e ENSGT00940000178140 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00650000094787 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ENSGT00980000202414 ENSGT00940000154658.a Ballan wrasse MODERN SPECIES 32 ENSLBEG00000020199 ENSLBEG00000020131 ENSLBEG00000020084 larp7 (ENSLBEG00000020062) COL25A1 (ENSLBEG00000020026) etnppl (ENSLBEG00000019967) ostc (ENSLBEG00000019949) rpl34 (ENSLBEG00000019926) SLC24A2 (ENSLBEG00000019874) sepsecs (ENSLBEG00000019794) lgi2a (ENSLBEG00000019750) ENSLBEG00000019730 ENSLBEG00000019708 ccdc149a (ENSLBEG00000019664) ENSLBEG00000019620 PPARGC1A (ENSLBEG00000019562) ##22 gba3 (ENSLBEG00000019541) ADGRA3 (ENSLBEG00000019470) KCNIP4 (ENSLBEG00000019403) sec24d (ENSLBEG00000019311) ENSLBEG00000019292 myoz2a (ENSLBEG00000019146) ENSLBEG00000019095 ENSLBEG00000019081 FBXL17 (ENSLBEG00000019061) PRXL2C (ENSLBEG00000019044) ENSLBEG00000018977 ENSLBEG00000018951 znf367 (ENSLBEG00000018925) ENSLBEG00000018885 ENSLBEG00000018867 Eupecaria_B ANCESTRAL SPECIES 20 ENSGT00940000159642.e ENSGT00940000178140 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00650000094787 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ENSGT00980000202414 ENSGT00940000154658.a Eupecaria_C ANCESTRAL SPECIES 20 ENSGT00390000005970 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 Eupercaria_incertae_sedis ANCESTRAL SPECIES 19 ENSGT00940000178571 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 European seabass MODERN SPECIES 16 ENSDLAG00005021873 ENSDLAG00005021856 ENSDLAG00005022090 ENSDLAG00005022094 ENSDLAG00005022182 ENSDLAG00005022185 COL25A1 (ENSDLAG00005027354) ENSDLAG00005022260 OSTC (ENSDLAG00005033655) ENSDLAG00005027613 sepsecs (ENSDLAG00005022341) lgi2a (ENSDLAG00005028049) ENSDLAG00005022371 ccdc149a (ENSDLAG00005022379) ENSDLAG00005022394 PPARGC1A (ENSDLAG00005022412) ##22 gba3 (ENSDLAG00005022428) ADGRA3 (ENSDLAG00005022440) KCNIP4 (ENSDLAG00005022495) sec24d (ENSDLAG00005022522) SYNPO2 (ENSDLAG00005022711) myoz2a (ENSDLAG00005027006) USP53 (ENSDLAG00005022719) PTPRD (ENSDLAG00005022790) ENSDLAG00005023769 ENSDLAG00005023772 ENSDLAG00005031040 MPDZ (ENSDLAG00005023845) ENSDLAG00005024755 ENSDLAG00005025425 CAAP1 (ENSDLAG00005006023) Gilthead seabream MODERN SPECIES 1 ENSSAUG00010026716 ENSSAUG00010026715 ENSSAUG00010026714 ENSSAUG00010026713 ENSSAUG00010026711 ENSSAUG00010026710 ENSSAUG00010026709 ENSSAUG00010026706 ENSSAUG00010026705 ENSSAUG00010026704 ENSSAUG00010026702 ENSSAUG00010026699 ENSSAUG00010026697 ccdc149a (ENSSAUG00010026696) ENSSAUG00010026692 PPARGC1A (ENSSAUG00010026690) ##22 gba3 (ENSSAUG00010026688) ADGRA3 (ENSSAUG00010026684) KCNIP4 (ENSSAUG00010026681) sec24d (ENSSAUG00010026666) SYNPO2 (ENSSAUG00010026663) myoz2a (ENSSAUG00010026662) USP53 (ENSSAUG00010026657) PTPRD (ENSSAUG00010018340) TYRP1 (ENSSAUG00010018023) LURAP1L (ENSSAUG00010018021) MPDZ (ENSSAUG00010013816) ADGRL3 (ENSSAUG00010007883) ENSSAUG00010002251 CAAP1 (ENSSAUG00010002020) elavl2 (ENSSAUG00010001898) Perciformes ANCESTRAL SPECIES 19 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT00940000159642.e ENSGT00940000178140 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00650000094787 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ENSGT00940000154658.a ENSGT00390000017010 Perciformes_a ANCESTRAL SPECIES 18 ENSGT00940000158215 ENSGT00390000005970 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ENSGT00940000154658.a ENSGT00390000017010 Pike perch MODERN SPECIES 65 DENND4C (ENSSLUG00000023788) ENSSLUG00000023743 plin2 (ENSSLUG00000023736) ENSSLUG00000023725 ENSSLUG00000023721 larp7 (ENSSLUG00000023715) etnppl (ENSSLUG00000023691) ostc (ENSSLUG00000023673) rpl34 (ENSSLUG00000023670) SLC24A2 (ENSSLUG00000023616) sepsecs (ENSSLUG00000023584) lgi2a (ENSSLUG00000023568) ccdc149a (ENSSLUG00000023407) ENSSLUG00000023363 ENSSLUG00000023358 PPARGC1A (ENSSLUG00000023352) ##22 gba3 (ENSSLUG00000023345) ADGRA3 (ENSSLUG00000022914) KCNIP4 (ENSSLUG00000022875) sec24d (ENSSLUG00000022346) ENSSLUG00000022306 myoz2a (ENSSLUG00000022299) USP53 (ENSSLUG00000022283) PTPRD (ENSSLUG00000019313) ENSSLUG00000019070 TYRP1 (ENSSLUG00000019066) LURAP1L (ENSSLUG00000019062) MPDZ (ENSSLUG00000015084) ENSSLUG00000014877 ADGRL3 (ENSSLUG00000010650) ENSSLUG00000025298 Channel bull blenny MODERN SPECIES 9 haus6 (ENSCGOG00000013333) DENND4C (ENSCGOG00000012628) ENSCGOG00000012603 plin2 (ENSCGOG00000012575) ADAMTSL1 (ENSCGOG00000012548) ENSCGOG00000012543 larp7 (ENSCGOG00000012378) etnppl (ENSCGOG00000012362) ostc (ENSCGOG00000012347) rpl34 (ENSCGOG00000012341) SLC24A2 (ENSCGOG00000012334) sepsecs (ENSCGOG00000012276) ENSCGOG00000012273 ccdc149a (ENSCGOG00000012248) ENSCGOG00000012205 PPARGC1A (ENSCGOG00000012175) ##22 gba3 (ENSCGOG00000012172) ADGRA3 (ENSCGOG00000012003) KCNIP4 (ENSCGOG00000011991) ENSCGOG00000011982 sec24d (ENSCGOG00000010688) ENSCGOG00000010643 ENSCGOG00000010641 ENSCGOG00000010638 myoz2a (ENSCGOG00000022655) USP53 (ENSCGOG00000022651) ENSCGOG00000022646 PTPRD (ENSCGOG00000015824) TYRP1 (ENSCGOG00000015529) LURAP1L (ENSCGOG00000015528) ENSCGOG00000015527 Cottioidei ANCESTRAL SPECIES 20 ENSGT00950000182920.b.a.b.a.a ENSGT00940000156243 ENSGT00940000159642.e ENSGT00940000178140 ENSGT01100000263573.a.a.b ENSGT00940000154949.b ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a.a.a.b ENSGT00390000007332 ENSGT00940000157294.d ENSGT00650000094787 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e Lumpfish MODERN SPECIES 9 ENSCLMG00005011285 ENSCLMG00005011284 ENSCLMG00005011283 ENSCLMG00005011282 ENSCLMG00005011280 larp7 (ENSCLMG00005011279) etnppl (ENSCLMG00005011277) ostc (ENSCLMG00005011274) rpl34 (ENSCLMG00005011271) SLC24A2 (ENSCLMG00005011128) sepsecs (ENSCLMG00005011113) lgi2a (ENSCLMG00005011108) ENSCLMG00005011106 ccdc149a (ENSCLMG00005011105) ENSCLMG00005011100 PPARGC1A (ENSCLMG00005010970) ##22 ENSCLMG00005010965 gba3 (ENSCLMG00005010964) ADGRA3 (ENSCLMG00005010962) KCNIP4 (ENSCLMG00005010960) sec24d (ENSCLMG00005006504) SYNPO2 (ENSCLMG00005006493) myoz2a (ENSCLMG00005006455) USP53 (ENSCLMG00005006452) ENSCLMG00005006450 PTPRD (ENSCLMG00005006368) TYRP1 (ENSCLMG00005006363) LURAP1L (ENSCLMG00005006362) ENSCLMG00005006360 ENSCLMG00005006356 ADGRL3 (ENSCLMG00005006125) Stickleback MODERN SPECIES 7 DENND4C (ENSGACG00000019650) ENSGACG00000019649 plin2 (ENSGACG00000019638) ENSGACG00000019629 larp7 (ENSGACG00000019618) etnppl (ENSGACG00000019605) ostc (ENSGACG00000019601) rpl34 (ENSGACG00000019593) ENSGACG00000019590 sepsecs (ENSGACG00000019587) lgi2a (ENSGACG00000019575) ENSGACG00000019574 ENSGACG00000019573 ccdc149a (ENSGACG00000019569) ENSGACG00000019549 PPARGC1A (ENSGACG00000019546) ##22 gba3 (ENSGACG00000019544) ADGRA3 (ENSGACG00000019543) KCNIP4 (ENSGACG00000019541) ENSGACG00000019539 sec24d (ENSGACG00000019537) SYNPO2 (ENSGACG00000019536) myoz2a (ENSGACG00000019535) USP53 (ENSGACG00000019533) PTPRD (ENSGACG00000019528) TYRP1 (ENSGACG00000019503) LURAP1L (ENSGACG00000019502) MPDZ (ENSGACG00000019499) ADGRL3 (ENSGACG00000019498) ENSGACG00000019493 CAAP1 (ENSGACG00000019489) Tetraodontidae ANCESTRAL SPECIES 29 ENSGT00390000013693 ENSGT00530000063652.a.a ENSGT00940000156306 ENSGT00950000182916.a.b.a.b ENSGT00940000158006 ENSGT00550000074944 ENSGT00940000159642.e ENSGT01100000263573.a.a.b ENSGT00940000159823 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT00940000157294.d ENSGT00390000015958.d ENSGT00950000183137.b.a ##22 ENSGT00940000160460 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155527.j.a ENSGT00390000017010 ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 MACF1 (ENSTNIG00000006990) bmp8a (ENSTNIG00000006989) gsk3aa (ENSTNIG00000006988) erf (ENSTNIG00000006987) POU2F2 (ENSTNIG00000006986) ENSTNIG00000003917 ENSTNIG00000005121 ezh2 (ENSTNIG00000004151) ssr1 (ENSTNIG00000004152) ENSTNIG00000004153 ENSTNIG00000005764 ENSTNIG00000001248 ENSTNIG00000011327 sepsecs (ENSTNIG00000011326) PPARGC1A (ENSTNIG00000011325) ##22 ENSTNIG00000002174 ##22 gba3 (ENSTNIG00000002058) KCNIP4 (ENSTNIG00000011324) sec24d (ENSTNIG00000011323) SYNPO2 (ENSTNIG00000011322) myoz2a (ENSTNIG00000011321) USP53 (ENSTNIG00000011320) PTPRD (ENSTNIG00000011319) TYRP1 (ENSTNIG00000011318) LURAP1L (ENSTNIG00000011317) MPDZ (ENSTNIG00000011316) ADGRL3 (ENSTNIG00000011315) ENSTNIG00000011314 CAAP1 (ENSTNIG00000011313) elavl2 (ENSTNIG00000011312) ENSTNIG00000019442 Tetraodon MODERN SPECIES 26 ndufs5 (ENSTNIG00000006930) MACF1 (ENSTNIG00000006990) bmp8a (ENSTNIG00000006989) gsk3aa (ENSTNIG00000006988) erf (ENSTNIG00000006987) POU2F2 (ENSTNIG00000006986) ENSTNIG00000003917 ENSTNIG00000005121 ezh2 (ENSTNIG00000004151) ssr1 (ENSTNIG00000004152) ENSTNIG00000004153 ENSTNIG00000005764 ENSTNIG00000001248 ENSTNIG00000011327 sepsecs (ENSTNIG00000011326) PPARGC1A (ENSTNIG00000011325) ##22 ENSTNIG00000002174 ##22 gba3 (ENSTNIG00000002058) KCNIP4 (ENSTNIG00000011324) sec24d (ENSTNIG00000011323) SYNPO2 (ENSTNIG00000011322) myoz2a (ENSTNIG00000011321) USP53 (ENSTNIG00000011320) PTPRD (ENSTNIG00000011319) TYRP1 (ENSTNIG00000011318) LURAP1L (ENSTNIG00000011317) MPDZ (ENSTNIG00000011316) ADGRL3 (ENSTNIG00000011315) ENSTNIG00000011314 CAAP1 (ENSTNIG00000011313) elavl2 (ENSTNIG00000011312) Fugu MODERN SPECIES 20 ENSTRUG00000026958 NFIB (ENSTRUG00000001510) zdhhc21 (ENSTRUG00000002191) plaa (ENSTRUG00000002447) plin2 (ENSTRUG00000004201) ENSTRUG00000023787 ENSTRUG00000004922 ENSTRUG00000027701 COL25A1 (ENSTRUG00000026946) etnppl (ENSTRUG00000005557) ostc (ENSTRUG00000005991) rpl34 (ENSTRUG00000026991) ENSTRUG00000006161 lgi2a (ENSTRUG00000006766) ccdc149a (ENSTRUG00000030376) PPARGC1A (ENSTRUG00000007210) ##22 ENSTRUG00000033268 gba3 (ENSTRUG00000007509) KCNIP4 (ENSTRUG00000032857) sec24d (ENSTRUG00000008125) SYNPO2 (ENSTRUG00000019819) myoz2a (ENSTRUG00000008669) USP53 (ENSTRUG00000025974) ENSTRUG00000031970 ENSTRUG00000033349 PTPRD (ENSTRUG00000008887) TYRP1 (ENSTRUG00000012615) LURAP1L (ENSTRUG00000020323) ADGRL3 (ENSTRUG00000002392) CAAP1 (ENSTRUG00000007809) ENSTRUG00000031453 Pinecone sodierfish MODERN SPECIES 9 plin2 (ENSMMDG00005015658) ENSMMDG00005015650 ENSMMDG00005015643 larp7 (ENSMMDG00005015539) ENSMMDG00005015532 etnppl (ENSMMDG00005015514) ostc (ENSMMDG00005015507) rpl34 (ENSMMDG00005015504) SLC24A2 (ENSMMDG00005015428) sepsecs (ENSMMDG00005015418) lgi2a (ENSMMDG00005015413) ENSMMDG00005015399 ccdc149a (ENSMMDG00005015256) sod3a (ENSMMDG00005015252) ENSMMDG00005014665 PPARGC1A (ENSMMDG00005014661) ##22 gba3 (ENSMMDG00005014659) ADGRA3 (ENSMMDG00005013961) KCNIP4 (ENSMMDG00005013889) sec24d (ENSMMDG00005013882) SYNPO2 (ENSMMDG00005013867) myoz2a (ENSMMDG00005013846) USP53 (ENSMMDG00005013843) PTPRD (ENSMMDG00005013826) TYRP1 (ENSMMDG00005013822) LURAP1L (ENSMMDG00005013820) MPDZ (ENSMMDG00005013814) ADGRL3 (ENSMMDG00005011905) ENSMMDG00005011884 CAAP1 (ENSMMDG00005011878) elavl2 (ENSMMDG00005011843) Spotted gar MODERN SPECIES 670 ENSLOCG00000012228 dnajb14 (ENSLOCG00000012236) CFI (ENSLOCG00000012242) pla2g12a (ENSLOCG00000012254) casp6a (ENSLOCG00000012266) MCUB (ENSLOCG00000012272) lef1 (ENSLOCG00000012276) hadh (ENSLOCG00000012288) cyp2u1 (ENSLOCG00000012294) trmt10a (ENSLOCG00000012298) mttp (ENSLOCG00000012306) lgi2b (ENSLOCG00000012324) ccdc149b (ENSLOCG00000012328) sod3a (ENSLOCG00000018062) dhx15 (ENSLOCG00000012339) PPARGC1A (ENSLOCG00000012350) ##22 gba3 (ENSLOCG00000012360) ADGRA3 (ENSLOCG00000012367) ENSLOCG00000012371 gabra4 (ENSLOCG00000012374) ENSLOCG00000012380 ENSLOCG00000012384 GABRG1 (ENSLOCG00000012390) ENSLOCG00000018064 GUF1 (ENSLOCG00000012397) ENSLOCG00000012405 YIPF7 (ENSLOCG00000012414) kctd8 (ENSLOCG00000018066) ENSLOCG00000018068 ENSLOCG00000012418 ENSLOCG00000012424 Reedfish MODERN SPECIES 13 htra3a (ENSECRG00000002082) ENSECRG00000002136 ENSECRG00000002176 ##12 ENSECRG00000002203 ENSECRG00000002306 ENSECRG00000002558 zcchc4 (ENSECRG00000002591) ENSECRG00000002629 ENSECRG00000002646 pi4k2b (ENSECRG00000002660) sepsecs (ENSECRG00000002685) lgi2b (ENSECRG00000002746) ccdc149b (ENSECRG00000002777) sod3a (ENSECRG00000002796) dhx15 (ENSECRG00000002829) PPARGC1A (ENSECRG00000002852) ##22 ENSECRG00000002862 gba3 (ENSECRG00000002869) ENSECRG00000002874 ADGRA3 (ENSECRG00000002915) ENSECRG00000003005 KCNIP4 (ENSECRG00000003040) PACRGL (ENSECRG00000003085) slit2 (ENSECRG00000003116) ENSECRG00000003171 ENSECRG00000003198 ncapg (ENSECRG00000003222) ENSECRG00000003249 ENSECRG00000003262 med28 (ENSECRG00000003283) lap3 (ENSECRG00000003303) Elephant shark MODERN SPECIES 1496 ENSCMIG00000010873 zcchc4 (ENSCMIG00000010863) ENSCMIG00000010817 ENSCMIG00000010788 sepsecs (ENSCMIG00000010770) lgi2b (ENSCMIG00000010740) ccdc149b (ENSCMIG00000010678) ENSCMIG00000010672 ENSCMIG00000010671 ENSCMIG00000010670 ENSCMIG00000010669 ENSCMIG00000010666 ENSCMIG00000010664 dhx15 (ENSCMIG00000010633) ENSCMIG00000010619 PPARGC1A (ENSCMIG00000010585) ##22 ADGRA3 (ENSCMIG00000010504) KCNIP4 (ENSCMIG00000010482) PACRGL (ENSCMIG00000010474) ENSCMIG00000010472 slit2 (ENSCMIG00000009724) ENSCMIG00000009458 LCORL (ENSCMIG00000009456) ncapg (ENSCMIG00000009338) ENSCMIG00000009297 ENSCMIG00000009296 ENSCMIG00000009293 med28 (ENSCMIG00000009291) lap3 (ENSCMIG00000009218) clrn2 (ENSCMIG00000009197) ldb2a (ENSCMIG00000009154)