Percomorphaceae	ANCESTRAL SPECIES	15	ENSGT00940000157405.c.b	ENSGT00390000001680 #7	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00940000157089.B #14	ENSGT00940000158287 #16	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000180696	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Percomorphaceae_B	ANCESTRAL SPECIES	12	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00960000187709	ENSGT00940000163916 #13	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000180696	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000181004	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36
Ovalentaria	ANCESTRAL SPECIES	17	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00940000163916 #13	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00940000154963 #19	ENSGT00940000180696	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000181004	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36
Ovalentaria_B	ANCESTRAL SPECIES	10	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00940000163916 #13	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000180696	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000181004	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36
Cichlidae	ANCESTRAL SPECIES	11	ENSGT00390000001680 #7	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000163916 #13	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Pseudocrenilabrinae	ANCESTRAL SPECIES	13	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000163916 #13	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f.n #15	ENSGT00950000182858.C.f.m.b #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	13	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000163916 #13	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f.m.a #15	ENSGT00950000182858.C.f.m.b #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT01100000267088	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31
Haplochromini	ANCESTRAL SPECIES	11	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000163916 #13	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f.n #15	ENSGT00950000182858.C.f.m.b #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT01100000267088	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31
Burton s mouthbrooder	MODERN SPECIES	598														slc6a5 (ENSHBUG00000008710) #19	htatip2 (ENSHBUG00000008629) #21	dbx1a (ENSHBUG00000008569) #22	NAV2 (ENSHBUG00000008498) #23	e2f8 (ENSHBUG00000008204) #24	csrp3 (ENSHBUG00000008042) #25	zdhhc13 (ENSHBUG00000008018) #26	mpped2a (ENSHBUG00000008007) #27	ENSHBUG00000007982	ENSHBUG00000007974 #28	ENSHBUG00000007959 #29	NR2E3 (ENSHBUG00000007859) #30
Haplochromini_A	ANCESTRAL SPECIES	10	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000179349	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000163916 #13	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f.n #15	ENSGT00950000182858.C.f.m.b #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT01100000267088	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31
P. nyererei	MODERN SPECIES	438						A3GALT2 (ENSPNYG00000002714) #15	ENSPNYG00000002692 #15	ENSPNYG00000002681 #16	ENSPNYG00000002655 #16	lrp4 (ENSPNYG00000002601) #16	ENSPNYG00000002542 #17	NELL1 (ENSPNYG00000002472) #18	slc6a5 (ENSPNYG00000002414) #19	prmt3 (ENSPNYG00000002362) #20	htatip2 (ENSPNYG00000002344) #21	dbx1a (ENSPNYG00000002268) #22	NAV2 (ENSPNYG00000002139) #23	e2f8 (ENSPNYG00000002093) #24	ENSPNYG00000002071	csrp3 (ENSPNYG00000002045) #25	zdhhc13 (ENSPNYG00000002022) #26	mpped2a (ENSPNYG00000001997) #27	ENSPNYG00000001955	ENSPNYG00000001942 #28	ENSPNYG00000001870 #29	NR2E3 (ENSPNYG00000001829) #30	slc22a18 (ENSPNYG00000001810) #31
Haplochromini_B	ANCESTRAL SPECIES	3	ENSGT00390000001680 #7	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000179349	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000163916 #13	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f.n #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31
Eastern happy	MODERN SPECIES							ENSACLG00000002418	ENSACLG00000002372	ENSACLG00000002364 #15	lrp4 (ENSACLG00000002100) #16	ENSACLG00000002079 #17	NELL1 (ENSACLG00000001948) #18	ENSACLG00000001912	slc6a5 (ENSACLG00000001866) #19	prmt3 (ENSACLG00000001816) #20	htatip2 (ENSACLG00000001778) #21	dbx1a (ENSACLG00000001754) #22	NAV2 (ENSACLG00000001504) #23	ENSACLG00000001415	e2f8 (ENSACLG00000001352) #24	csrp3 (ENSACLG00000001322) #25	zdhhc13 (ENSACLG00000001297) #26	mpped2a (ENSACLG00000001241) #27	ENSACLG00000001233 #28	ENSACLG00000001162 #29	NR2E3 (ENSACLG00000001100) #30	slc22a18 (ENSACLG00000001048) #31	tshz3b (ENSACLG00000000967)	ENSACLG00000000947	ENSACLG00000000933	ZNF536 (ENSACLG00000000897)	ccne1 (ENSACLG00000000839)
Zebra mbuna	MODERN SPECIES	1091	ENSMZEG00005014191	chst1 (ENSMZEG00005014195) #11	ENSMZEG00005014203	ENSMZEG00005014211 #12	ENSMZEG00005014220 #13	MAPK8IP1 (ENSMZEG00005014229) #14	ENSMZEG00005014251 #15	ENSMZEG00005014257	ENSMZEG00005014270	lrp4 (ENSMZEG00005014311) #16	NELL1 (ENSMZEG00005014408) #18	ENSMZEG00005014419 #17	slc6a5 (ENSMZEG00005014432) #19	prmt3 (ENSMZEG00005014447) #20	htatip2 (ENSMZEG00005014464) #21	dbx1a (ENSMZEG00005014483) #22	NAV2 (ENSMZEG00005014529) #23	e2f8 (ENSMZEG00005014622) #24	csrp3 (ENSMZEG00005014652) #25	zdhhc13 (ENSMZEG00005014665) #26	mpped2a (ENSMZEG00005014683) #27	ENSMZEG00005014709 #28	ENSMZEG00005014718 #29	NR2E3 (ENSMZEG00005014737) #30	slc22a18 (ENSMZEG00005014753) #31	ENSMZEG00005014767	ENSMZEG00005014779	ENSMZEG00005014786	ENSMZEG00005014794	ENSMZEG00005014803	ENSMZEG00005014810
Lyretail cichlid	MODERN SPECIES	320	slc1a2a (ENSNBRG00000018584) #8	PAMR1 (ENSNBRG00000018544) #9	slc35c1 (ENSNBRG00000018530) #10	ENSNBRG00000018522	chst1 (ENSNBRG00000018513) #11	ENSNBRG00000018473 #12	ENSNBRG00000018456 #13	MAPK8IP1 (ENSNBRG00000018420) #14	ENSNBRG00000018403 #15	lrp4 (ENSNBRG00000018321) #16	ENSNBRG00000018265 #17	NELL1 (ENSNBRG00000018215) #18	slc6a5 (ENSNBRG00000018128) #19	prmt3 (ENSNBRG00000018024) #20	htatip2 (ENSNBRG00000017997) #21	dbx1a (ENSNBRG00000017981) #22	NAV2 (ENSNBRG00000017891) #23	e2f8 (ENSNBRG00000017843) #24	ENSNBRG00000017816	csrp3 (ENSNBRG00000017790) #25	zdhhc13 (ENSNBRG00000017600) #26	mpped2a (ENSNBRG00000017550) #27	ENSNBRG00000017535 #28	ENSNBRG00000017462 #29	NR2E3 (ENSNBRG00000017421) #30	slc22a18 (ENSNBRG00000017366) #31
Nile tilapia	MODERN SPECIES		ENSONIG00000036152	CEMIP (ENSONIG00000001973)	ENSONIG00000040573	mesd (ENSONIG00000027733)	ENSONIG00000015031	ENSONIG00000015033	ENSONIG00000042169	pacsin3 (ENSONIG00000008282)	ENSONIG00000038233	mtfmt (ENSONIG00000014631)	uqcrfs1 (ENSONIG00000010416)	rasl12 (ENSONIG00000034413)	KBTBD13 (ENSONIG00000020976)	UBAP1L (ENSONIG00000031699)	pdcd7 (ENSONIG00000032653)	dbx1a (ENSONIG00000007144) #22	NAV2 (ENSONIG00000007138) #23	e2f8 (ENSONIG00000007135) #24	csrp3 (ENSONIG00000007132) #25	zdhhc13 (ENSONIG00000007127) #26	mpped2a (ENSONIG00000007125) #27	ENSONIG00000007124 #28	ENSONIG00000007114 #29	NR2E3 (ENSONIG00000007109) #30	slc22a18 (ENSONIG00000007107) #31	HACD3 (ENSONIG00000007103) #32	SLC24A1 (ENSONIG00000007099) #33	ENSONIG00000042264	dennd4a (ENSONIG00000007087) #34	socs4 (ENSONIG00000020753) #35	wdhd1 (ENSONIG00000007084) #36
Midas cichlid	MODERN SPECIES	489										lrp4 (ENSACIG00000023695) #16	NELL1 (ENSACIG00000023718) #18	ENSACIG00000023725 #17	slc6a5 (ENSACIG00000023732) #19	prmt3 (ENSACIG00000023753) #20	htatip2 (ENSACIG00000023759) #21	dbx1a (ENSACIG00000023765) #22	NAV2 (ENSACIG00000023770) #23	e2f8 (ENSACIG00000023779) #24	csrp3 (ENSACIG00000023782) #25	zdhhc13 (ENSACIG00000023783) #26	mpped2a (ENSACIG00000023791) #27	ENSACIG00000023793 #28	ENSACIG00000023798 #29	NR2E3 (ENSACIG00000023810) #30	slc22a18 (ENSACIG00000023823) #31
Pomacentridae	ANCESTRAL SPECIES	15	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000180696	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000181004	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a.p #27	ENSGT00390000007681.b.a.a.o #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35
Pomacentridae_A	ANCESTRAL SPECIES	66	ENSGT00390000001680 #7	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00940000154963 #19	ENSGT00940000180696	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000181004	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a.p #27	ENSGT00390000007681.b.a.a.o #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35
Amphiprion	ANCESTRAL SPECIES	42	ENSGT00390000001680 #7	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b.b #12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000177592.b.a.a	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00940000154963 #19	ENSGT00940000180696	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000181004	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00940000177702.a.a	ENSGT00390000007681.b.a.a.o #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35
Clown anemonefish	MODERN SPECIES	616												slc6a5 (ENSAOCG00000013734) #19	ENSAOCG00000013748	prmt3 (ENSAOCG00000013816) #20	htatip2 (ENSAOCG00000013870) #21	dbx1a (ENSAOCG00000013924) #22	ENSAOCG00000013942	NAV2 (ENSAOCG00000014069) #23
Orange clownfish	MODERN SPECIES		ENSAPEG00000000124 #12	ENSAPEG00000000125 ##12	MAPK8IP1 (ENSAPEG00000000126) #14	A3GALT2 (ENSAPEG00000000127) #15	lrp4 (ENSAPEG00000000128) #16	ENSAPEG00000000131	NELL1 (ENSAPEG00000000132) #18	ENSAPEG00000000133	ENSAPEG00000000134	ENSAPEG00000000135	ENSAPEG00000000136 #17	ENSAPEG00000000137	slc6a5 (ENSAPEG00000000138) #19	prmt3 (ENSAPEG00000000139) #20	htatip2 (ENSAPEG00000000140) #21	dbx1a (ENSAPEG00000000141) #22	NAV2 (ENSAPEG00000000142) #23	ENSAPEG00000000143	e2f8 (ENSAPEG00000000144) #24	csrp3 (ENSAPEG00000000145) #25	zdhhc13 (ENSAPEG00000000146) #26	ENSAPEG00000000147	mpped2a (ENSAPEG00000000148) #27	ENSAPEG00000000149 #28	ENSAPEG00000000150 #29	NR2E3 (ENSAPEG00000000151) #30	slc22a18 (ENSAPEG00000000152) #31	HACD3 (ENSAPEG00000000153) #32	SLC24A1 (ENSAPEG00000000154) #33	dennd4a (ENSAPEG00000000155) #34	socs4 (ENSAPEG00000000156) #35
Spiny chromis	MODERN SPECIES	985																dbx1a (ENSAPOG00000010771) #22	ENSAPOG00000010774	ENSAPOG00000010794	NAV2 (ENSAPOG00000010965) #23	e2f8 (ENSAPOG00000011110) #24
Bicolor damselfish	MODERN SPECIES	2411															htatip2 (ENSSPAG00000003544) #21	dbx1a (ENSSPAG00000003555) #22
Atherinomorphae	ANCESTRAL SPECIES	8	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680 #7	ENSGT00530000068132	ENSGT00940000155379.g.a #8	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Oryzias	ANCESTRAL SPECIES	13	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680 #7	ENSGT00940000155379.g.a.d #8	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000153246.a.a.a.d #29
Oryzias_b	ANCESTRAL SPECIES	5	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680 #7	ENSGT00940000155379.g.a.d #8	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f.g #15	ENSGT00950000182858.C.f.h #15	ENSGT00940000158287 #16	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27
Indian medaka	MODERN SPECIES	26	FNDC5 (ENSOMEG00000004225)	olig4 (ENSOMEG00000004214)	bsdc1 (ENSOMEG00000004206)	marcksl1a (ENSOMEG00000004195)	gjb9a (ENSOMEG00000004186)	ENSOMEG00000004172 #12	MAPK8IP1 (ENSOMEG00000004148) #14	ENSOMEG00000004105 #15	ENSOMEG00000004083 #15	lrp4 (ENSOMEG00000003967) #16	NELL1 (ENSOMEG00000003767) #18	slc6a5 (ENSOMEG00000003689) #19	prmt3 (ENSOMEG00000003641) #20	htatip2 (ENSOMEG00000003594) #21	ENSOMEG00000003567	dbx1a (ENSOMEG00000003559) #22	NAV2 (ENSOMEG00000003514) #23	e2f8 (ENSOMEG00000003361) #24	ENSOMEG00000003350	rpl12 (ENSOMEG00000003330)	pole3 (ENSOMEG00000003317)	cd82a (ENSOMEG00000003303)	ccnb2 (ENSOMEG00000003281)	kmt5b (ENSOMEG00000003244)	ENSOMEG00000003183	lto1 (ENSOMEG00000003119)	fgf3 (ENSOMEG00000000784)	fgf4 (ENSOMEG00000003060)	fgf19 (ENSOMEG00000003048)	zgc:153993 (ENSOMEG00000003033)	ENSOMEG00000003019
Javanese ricefish	MODERN SPECIES	17	ENSOJAG00000015714	ENSOJAG00000015688	chst1 (ENSOJAG00000015677) #11	ENSOJAG00000015665 #12	MAPK8IP1 (ENSOJAG00000015651) #14	ENSOJAG00000015638 #15	ENSOJAG00000015513 #15	ENSOJAG00000015497 #15	ENSOJAG00000015490	lrp4 (ENSOJAG00000014843) #16	ENSOJAG00000014828	NELL1 (ENSOJAG00000012002) #18	slc6a5 (ENSOJAG00000011557) #19	prmt3 (ENSOJAG00000011109) #20	htatip2 (ENSOJAG00000011049) #21	dbx1a (ENSOJAG00000011041) #22	ENSOJAG00000009101 #24	csrp3 (ENSOJAG00000009082) #25	zdhhc13 (ENSOJAG00000008970) #26	mpped2a (ENSOJAG00000008895) #27	ENSOJAG00000008875	ENSOJAG00000008853	ENSOJAG00000008707 #29	ENSOJAG00000008690	c1qtnf4 (ENSOJAG00000008670)	ndufs3 (ENSOJAG00000008508)	ptpmt1 (ENSOJAG00000008484)	prc1b (ENSOJAG00000008140)	vps33b (ENSOJAG00000007365)	hddc3 (ENSOJAG00000007349)	hypk (ENSOJAG00000007328)
Oryzias_a	ANCESTRAL SPECIES	6	ENSGT00940000155426	ENSGT00390000006196	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680 #7	ENSGT00940000155379.g.a.c #8	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f.i.b #15	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000153246.a.a.a.d #29
Chinese medaka	MODERN SPECIES	525														slc6a5 (ENSOSIG00000008174) #19	prmt3 (ENSOSIG00000008116) #20	dbx1a (ENSOSIG00000008111) #22	NAV2 (ENSOSIG00000001243) #23
Japanese Medaka HdrR	MODERN SPECIES	17	ENSORLG00000000925 #12	ENSORLG00000000893 #15	ENSORLG00000029669 #15	ENSORLG00000023015 #15	ENSORLG00000028272 #15	MAPK8IP1 (ENSORLG00000000916) #14	ENSORLG00000026038 #15	ENSORLG00000023544 #15	ENSORLG00000022596	ENSORLG00000025652	NELL1 (ENSORLG00000022140) #18	slc6a5 (ENSORLG00000000875) #19	ENSORLG00000030475	prmt3 (ENSORLG00000000829) #20	htatip2 (ENSORLG00000027238) #21	dbx1a (ENSORLG00000024440) #22	NAV2 (ENSORLG00000000800) #23	ENSORLG00000028070	e2f8 (ENSORLG00000000786) #24	csrp3 (ENSORLG00000000776) #25	ENSORLG00000023620	zdhhc13 (ENSORLG00000000765) #26	mpped2a (ENSORLG00000000727) #27	ENSORLG00000022721	ENSORLG00000000708 #29	ENSORLG00000022554	ENSORLG00000030602	ENSORLG00000026176	ENSORLG00000026435	ENSORLG00000026583	ENSORLG00000024579
Cyprinodontiformes	ANCESTRAL SPECIES	9	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680 #7	ENSGT00530000068132	ENSGT00940000155379.g.a #8	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Cyprinodontoidei	ANCESTRAL SPECIES	6	ENSGT00940000157405.c.b	ENSGT00390000001680 #7	ENSGT00530000068132	ENSGT00940000155379.g.a #8	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
NAME_4	ANCESTRAL SPECIES	66	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680 #7	ENSGT00940000155379.g.a #8	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A.ac.b #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030.n #36	ENSGT00390000013481.c.a #37
Mummichog	MODERN SPECIES	2279						chst1 (ENSFHEG00000020880) #11	ENSFHEG00000020899 #12	MAPK8IP1 (ENSFHEG00000020948) #14	ENSFHEG00000021031 #15	lrp4 (ENSFHEG00000021307) #16	ENSFHEG00000021337	NELL1 (ENSFHEG00000021393) #18	slc6a5 (ENSFHEG00000021451) #19	prmt3 (ENSFHEG00000021475) #20	htatip2 (ENSFHEG00000021519) #21	dbx1a (ENSFHEG00000021545) #22	NAV2 (ENSFHEG00000022260) #23	csrp3 (ENSFHEG00000022329) #25	zdhhc13 (ENSFHEG00000022440) #26	mpped2a (ENSFHEG00000022477) #27	ENSFHEG00000022514 #28	ENSFHEG00000022562 #29	NR2E3 (ENSFHEG00000022629) #30	slc22a18 (ENSFHEG00000022663) #31	HACD3 (ENSFHEG00000022712) #32	SLC24A1 (ENSFHEG00000022722) #33
Sheepshead minnow	MODERN SPECIES	198													slc6a5 (ENSCVAG00000004641) #19	prmt3 (ENSCVAG00000004723) #20	htatip2 (ENSCVAG00000004752) #21	dbx1a (ENSCVAG00000000143) #22	NAV2 (ENSCVAG00000004848) #23	e2f8 (ENSCVAG00000004920) #24	csrp3 (ENSCVAG00000004937) #25	zdhhc13 (ENSCVAG00000004950) #26	mpped2a (ENSCVAG00000004974) #27	ENSCVAG00000005070	ENSCVAG00000005078 #28	ENSCVAG00000005151 #29	NR2E3 (ENSCVAG00000005210) #30	slc22a18 (ENSCVAG00000005226) #31	HACD3 (ENSCVAG00000005529) #32	SLC24A1 (ENSCVAG00000005559) #33	dennd4a (ENSCVAG00000005774) #34	socs4 (ENSCVAG00000005809) #35	wdhd1 (ENSCVAG00000006106) #36
Poeciliinae	ANCESTRAL SPECIES	13	ENSGT00940000157405.c.b	ENSGT00390000001680 #7	ENSGT00530000068132	ENSGT00940000155379.g.a #8	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00390000011262.e.b	ENSGT00950000182973.b.a	ENSGT00390000007753.b
Poecilia	ANCESTRAL SPECIES	4	ENSGT00940000157405.c.b	ENSGT00390000001680 #7	ENSGT00530000068132	ENSGT00940000155379.g.a #8	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.b.a.a	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00390000011262.e.b	ENSGT00950000182973.b.a
NAME_6	ANCESTRAL SPECIES	92											ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.b.a.a.d.b	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.b.a.a.d.a	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.b.a.a.c	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34
Amazon molly	MODERN SPECIES	350										lrp4 (ENSPFOG00000001943) #16	NELL1 (ENSPFOG00000002902) #18	ENSPFOG00000003390 #17	slc6a5 (ENSPFOG00000003404) #19	prmt3 (ENSPFOG00000003622) #20	htatip2 (ENSPFOG00000003994) #21	dbx1a (ENSPFOG00000004028) #22	NAV2 (ENSPFOG00000004146) #23	ENSPFOG00000000656	e2f8 (ENSPFOG00000005584) #24	csrp3 (ENSPFOG00000023629) #25	zdhhc13 (ENSPFOG00000005728) #26	mpped2a (ENSPFOG00000005905) #27	ENSPFOG00000020325 #28	ENSPFOG00000005972 #29	NR2E3 (ENSPFOG00000006106) #30	ENSPFOG00000006219	ENSPFOG00000006238	slc22a18 (ENSPFOG00000006271) #31	HACD3 (ENSPFOG00000006432) #32	ENSPFOG00000006545 #33	dennd4a (ENSPFOG00000006791) #34
Sailfin molly	MODERN SPECIES	595													slc6a5 (ENSPLAG00000002065) #19	prmt3 (ENSPLAG00000002049) #20	htatip2 (ENSPLAG00000002037) #21	dbx1a (ENSPLAG00000002032) #22	NAV2 (ENSPLAG00000002020) #23
Guppy	MODERN SPECIES	455							ENSPREG00000020315 #12	MAPK8IP1 (ENSPREG00000020263) #14	ENSPREG00000020229 #15	lrp4 (ENSPREG00000020107) #16	ENSPREG00000020051 #17	NELL1 (ENSPREG00000019953) #18	slc6a5 (ENSPREG00000019890) #19	prmt3 (ENSPREG00000019857) #20	htatip2 (ENSPREG00000019845) #21	dbx1a (ENSPREG00000019836) #22	ENSPREG00000019829	NAV2 (ENSPREG00000019505) #23	e2f8 (ENSPREG00000019385) #24	csrp3 (ENSPREG00000019363) #25	zdhhc13 (ENSPREG00000019340) #26	mpped2a (ENSPREG00000019313) #27	ENSPREG00000019289 #28	ENSPREG00000019267 #29	ENSPREG00000019254	slc22a18 (ENSPREG00000019227) #31	HACD3 (ENSPREG00000019209) #32	SLC24A1 (ENSPREG00000019149) #33	dennd4a (ENSPREG00000018994) #34	glg1b (ENSPREG00000018842)	pacsin3 (ENSPREG00000018797)
Platyfish	MODERN SPECIES	18	hsd17b12b (ENSXMAG00000011880)	ENSXMAG00000023283	LRRC4C (ENSXMAG00000019680)	apip (ENSXMAG00000001487) #7	slc1a2a (ENSXMAG00000001471) #8	slc35c1 (ENSXMAG00000001466) #10	chst1 (ENSXMAG00000020315) #11	ENSXMAG00000001456 #12	MAPK8IP1 (ENSXMAG00000027053) #14	lrp4 (ENSXMAG00000001380) #16	ENSXMAG00000023927 #17	NELL1 (ENSXMAG00000001374) #18	slc6a5 (ENSXMAG00000010152) #19	prmt3 (ENSXMAG00000010154) #20	htatip2 (ENSXMAG00000010179) #21	dbx1a (ENSXMAG00000010186) #22	NAV2 (ENSXMAG00000010189) #23	ENSXMAG00000024557	e2f8 (ENSXMAG00000010237) #24	csrp3 (ENSXMAG00000027973) #25	zdhhc13 (ENSXMAG00000010253) #26	mpped2a (ENSXMAG00000010273) #27	ENSXMAG00000019869 #28	ENSXMAG00000010292 #29	NR2E3 (ENSXMAG00000010311) #30	ENSXMAG00000027678	ENSXMAG00000029990	slc22a18 (ENSXMAG00000010324) #31	HACD3 (ENSXMAG00000010327) #32	SLC24A1 (ENSXMAG00000010371) #33	dennd4a (ENSXMAG00000010376) #34
Aplocheiloidei	ANCESTRAL SPECIES	39	ENSGT00940000154860.a.a	ENSGT00940000176990	ENSGT00940000157405.c.b	ENSGT00390000001680 #7	ENSGT00940000155379.g.a #8	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Mangrove rivulus	MODERN SPECIES	94											NELL1 (ENSKMAG00000020064) #18	ENSKMAG00000020107 #17	slc6a5 (ENSKMAG00000020116) #19	prmt3 (ENSKMAG00000020166) #20	htatip2 (ENSKMAG00000020191) #21	dbx1a (ENSKMAG00000020206) #22	NAV2 (ENSKMAG00000020245) #23	e2f8 (ENSKMAG00000020305) #24	csrp3 (ENSKMAG00000020338) #25	zdhhc13 (ENSKMAG00000020369) #26	mpped2a (ENSKMAG00000020431) #27	ENSKMAG00000020454 #28	ENSKMAG00000020462 #29	NR2E3 (ENSKMAG00000020481) #30	slc22a18 (ENSKMAG00000020503) #31	HACD3 (ENSKMAG00000020519) #32	SAMD4A (ENSKMAG00000020543)	gch1 (ENSKMAG00000020574) #37	wdhd1 (ENSKMAG00000020604) #36	socs4 (ENSKMAG00000020674) #35	ENSKMAG00000020680
Turquoise killifish	MODERN SPECIES	1616	MAPK8IP1 (ENSNFUG00015008703) #14	ENSNFUG00015008697	ENSNFUG00015008695	ENSNFUG00015008690	CABZ01083440.1 (ENSNFUG00015007483) #16	ENSNFUG00015007340	ENSNFUG00015007337	ENSNFUG00015007333	ENSNFUG00015007332	ENSNFUG00015007327	NELL1 (ENSNFUG00015006562) #18	ENSNFUG00015006470	slc6a5 (ENSNFUG00015006314) #19	PRMT3 (ENSNFUG00015006258) #20	HTATIP2 (ENSNFUG00015006232) #21	OLA.2304 (ENSNFUG00015006227) #22	NAV2 (ENSNFUG00015005223) #23	GLG1 (ENSNFUG00015004673)	pacsin3 (ENSNFUG00015004647)	ENSNFUG00015004640	PACSIN3 (ENSNFUG00015004592)	SAMD4A (ENSNFUG00015004563)	GCH1 (ENSNFUG00015004539) #37	WDHD1 (ENSNFUG00015004515) #36	socs4 (ENSNFUG00015004506) #35	ENSNFUG00015004502	dennd4a (ENSNFUG00015004412) #34	SLC24A1 (ENSNFUG00015004331) #33	PTPLAD1 (ENSNFUG00015004247) #32	SLC22A18 (ENSNFUG00015004215) #31	NR2E3 (ENSNFUG00015004197) #30
Percomorphaceae_C	ANCESTRAL SPECIES	11	ENSGT00530000068132	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00960000187709	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000181004	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36
Percomorphaceae_D	ANCESTRAL SPECIES	11	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00960000187709	ENSGT00940000163916 #13	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000181004	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36
Carangaria	ANCESTRAL SPECIES	11	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00960000187709	ENSGT00940000163916 #13	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Carangaria_A	ANCESTRAL SPECIES	19	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00960000187709	ENSGT00940000163916 #13	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Seriola	ANCESTRAL SPECIES	30	ENSGT00390000001680 #7	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00960000187709	ENSGT00940000163916 #13	ENSGT00940000157089.B #14	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Greater amberjack	MODERN SPECIES	3	slc1a2a (ENSSDUG00000015573) #8	ENSSDUG00000015599 #9	slc35c1 (ENSSDUG00000015611) #10	chst1 (ENSSDUG00000015618) #11	ENSSDUG00000015619 #12	ENSSDUG00000015638 ##12	ENSSDUG00000015701 #13	MAPK8IP1 (ENSSDUG00000015714) #14	lrp4 (ENSSDUG00000015763) #16	NELL1 (ENSSDUG00000015920) #18	ENSSDUG00000015986 #17	ENSSDUG00000015990	slc6a5 (ENSSDUG00000016016) #19	prmt3 (ENSSDUG00000016148) #20	htatip2 (ENSSDUG00000016210) #21	dbx1a (ENSSDUG00000016225) #22	NAV2 (ENSSDUG00000016252) #23	e2f8 (ENSSDUG00000016327) #24	csrp3 (ENSSDUG00000016350) #25	zdhhc13 (ENSSDUG00000016374) #26	mpped2a (ENSSDUG00000016439) #27	ENSSDUG00000016457 #28	ENSSDUG00000016485 #29	NR2E3 (ENSSDUG00000016573) #30	slc22a18 (ENSSDUG00000016604) #31	HACD3 (ENSSDUG00000016623) #32	SLC24A1 (ENSSDUG00000016668) #33	dennd4a (ENSSDUG00000016708) #34	socs4 (ENSSDUG00000016907) #35	wdhd1 (ENSSDUG00000016996) #36	gch1 (ENSSDUG00000017494) #37
Yellowtail amberjack	MODERN SPECIES	2747											NELL1 (ENSSLDG00000002809) #18	ENSSLDG00000002962 #17	slc6a5 (ENSSLDG00000002974) #19	prmt3 (ENSSLDG00000003057) #20	htatip2 (ENSSLDG00000003097) #21	dbx1a (ENSSLDG00000003142) #22	ENSSLDG00000003176 #23
Barramundi perch	MODERN SPECIES	96	slc1a2a (ENSLCAG00010018316) #8	ENSLCAG00010018310 #9	slc35c1 (ENSLCAG00010018307) #10	chst1 (ENSLCAG00010018305) #11	ENSLCAG00010018302 #12	ENSLCAG00010018301 ##12	ENSLCAG00010018298 #13	MAPK8IP1 (ENSLCAG00010018292) #14	ENSLCAG00010018289 #15	lrp4 (ENSLCAG00010018047) #16	ENSLCAG00010017973 #17	NELL1 (ENSLCAG00010017942) #18	slc6a5 (ENSLCAG00010017918) #19	prmt3 (ENSLCAG00010017909) #20	htatip2 (ENSLCAG00010017906) #21	dbx1a (ENSLCAG00010017904) #22	ENSLCAG00010017900	NAV2 (ENSLCAG00010017798) #23	e2f8 (ENSLCAG00010017767) #24	csrp3 (ENSLCAG00010017763) #25	zdhhc13 (ENSLCAG00010017744) #26	mpped2a (ENSLCAG00010017716) #27	ENSLCAG00010017710 #28	ENSLCAG00010017694 #29	NR2E3 (ENSLCAG00010017688) #30	slc22a18 (ENSLCAG00010017678) #31	HACD3 (ENSLCAG00010017676) #32	SLC24A1 (ENSLCAG00010017673) #33	dennd4a (ENSLCAG00010017670) #34	socs4 (ENSLCAG00010017668) #35	wdhd1 (ENSLCAG00010017654) #36
Pleuronectoidei	ANCESTRAL SPECIES	39	ENSGT00390000001680 #7	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Turbot	MODERN SPECIES	17	slc1a2a (ENSSMAG00000008734) #8	ENSSMAG00000008725 #9	ENSSMAG00000029408 #10	ENSSMAG00000008702 #11	ENSSMAG00000008698 #12	ENSSMAG00000008677 ##12	ENSSMAG00000008616 #14	ENSSMAG00000008605 #15	ENSSMAG00000008497 #16	ENSSMAG00000008480 #17	NELL1 (ENSSMAG00000008339) #18	slc6a5 (ENSSMAG00000008312) #19	prmt3 (ENSSMAG00000008265) #20	ENSSMAG00000008258	htatip2 (ENSSMAG00000008235) #21	dbx1a (ENSSMAG00000023716) #22	NAV2 (ENSSMAG00000008150) #23	e2f8 (ENSSMAG00000008106) #24	csrp3 (ENSSMAG00000008056) #25	zdhhc13 (ENSSMAG00000008013) #26	mpped2a (ENSSMAG00000033645) #27	ENSSMAG00000007996 #28	ENSSMAG00000007972 #29	ENSSMAG00000007954 #30	ENSSMAG00000007929 #31	HACD3 (ENSSMAG00000007882) #32	SLC24A1 (ENSSMAG00000007857) #33	DENND4A (ENSSMAG00000007433) #34	wdhd1 (ENSSMAG00000007346) #36	ENSSMAG00000034634 #37	SAMD4A (ENSSMAG00000007254)
Tongue sole	MODERN SPECIES	20											ENSCSEG00000019436 #17	NELL1 (ENSCSEG00000019419) #18	slc6a5 (ENSCSEG00000019410) #19	prmt3 (ENSCSEG00000019404) #20	htatip2 (ENSCSEG00000019402) #21	dbx1a (ENSCSEG00000019398) #22	ENSCSEG00000019395	NAV2 (ENSCSEG00000019359) #23	e2f8 (ENSCSEG00000019335) #24	csrp3 (ENSCSEG00000019333) #25	zdhhc13 (ENSCSEG00000019323) #26	mpped2a (ENSCSEG00000019316) #27	ENSCSEG00000019314 #28	ENSCSEG00000019294 #29	NR2E3 (ENSCSEG00000019282) #30	slc22a18 (ENSCSEG00000019279) #31	HACD3 (ENSCSEG00000019267) #32	SLC24A1 (ENSCSEG00000019249) #33	dennd4a (ENSCSEG00000019190) #34	socs4 (ENSCSEG00000019179) #35	lipca (ENSCSEG00000019171)
Anabantaria	ANCESTRAL SPECIES	11	ENSGT00390000001680 #7	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00960000187709	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000181004	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36
Anabantoidei	ANCESTRAL SPECIES	8	ENSGT00940000157405.c.b	ENSGT00390000001680 #7	ENSGT00940000155379.g.a #8	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00960000187709	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Climbing perch	MODERN SPECIES	16	APIP (ENSATEG00000027665) #7	slc1a2a (ENSATEG00000021313) #8	ENSATEG00000029077	ENSATEG00000030098 #10	ENSATEG00000021360 #11	ENSATEG00000021366 #12	ENSATEG00000028460	ENSATEG00000021394 #14	ENSATEG00000021428 #15	ENSATEG00000021458 #16	NELL1 (ENSATEG00000021543) #18	ENSATEG00000021560 #17	slc6a5 (ENSATEG00000021586) #19	prmt3 (ENSATEG00000021598) #20	htatip2 (ENSATEG00000021609) #21	dbx1a (ENSATEG00000021616) #22	NAV2 (ENSATEG00000021634) #23	csrp3 (ENSATEG00000021724) #25	zdhhc13 (ENSATEG00000021742) #26	mpped2a (ENSATEG00000021765) #27	ENSATEG00000021774 #28	ENSATEG00000021798 #29	ENSATEG00000021837 #30	ENSATEG00000021851 #31	HACD3 (ENSATEG00000021866) #32	SLC24A1 (ENSATEG00000021887) #33	DENND4A (ENSATEG00000021908) #34	socs4 (ENSATEG00000021970) #35	wdhd1 (ENSATEG00000021986) #36	gch1 (ENSATEG00000022027) #37	SAMD4A (ENSATEG00000022040)
Siamese fighting fish	MODERN SPECIES	14	csnk2a2a (ENSBSLG00000010323)	ZNF319 (ENSBSLG00000010313)	ENSBSLG00000010307	psmd13 (ENSBSLG00000009883)	sirt3 (ENSBSLG00000009816)	drd4b (ENSBSLG00000009796)	ENSBSLG00000009760	ctsd (ENSBSLG00000009483)	adra2db (ENSBSLG00000009465)	ENSBSLG00000009458	ENSBSLG00000009450 #17	NELL1 (ENSBSLG00000008725) #18	slc6a5 (ENSBSLG00000008092) #19	prmt3 (ENSBSLG00000007842) #20	htatip2 (ENSBSLG00000007747) #21	dbx1a (ENSBSLG00000007714) #22	NAV2 (ENSBSLG00000005804) #23	e2f8 (ENSBSLG00000005446) #24	csrp3 (ENSBSLG00000005399) #25	zdhhc13 (ENSBSLG00000005203) #26	mpped2a (ENSBSLG00000004960) #27	ENSBSLG00000004906 #28	ENSBSLG00000004802 #29	ENSBSLG00000004363 #33	dennd4a (ENSBSLG00000004135) #34	socs4 (ENSBSLG00000004085) #35	gch1 (ENSBSLG00000004073) #37	SAMD4A (ENSBSLG00000004019)	wdhd1 (ENSBSLG00000003779) #36	pacsin3 (ENSBSLG00000003052)	glg1b (ENSBSLG00000002553)
Zig-zag eel	MODERN SPECIES	17	ENSMAMG00000015494	apip (ENSMAMG00000015506) #7	slc1a2a (ENSMAMG00000015526) #8	ENSMAMG00000015550 #9	ENSMAMG00000025042 #10	ENSMAMG00000015586 #11	ENSMAMG00000015588 #12	ENSMAMG00000015594 #14	ENSMAMG00000015633 #15	ENSMAMG00000015657 #16	ENSMAMG00000015820 #17	NELL1 (ENSMAMG00000015789) #18	slc6a5 (ENSMAMG00000015848) #19	prmt3 (ENSMAMG00000015896) #20	htatip2 (ENSMAMG00000015926) #21	dbx1a (ENSMAMG00000015940) #22	ENSMAMG00000016183	NAV2 (ENSMAMG00000015959) #23	e2f8 (ENSMAMG00000016200) #24	csrp3 (ENSMAMG00000016232) #25	zdhhc13 (ENSMAMG00000016250) #26	mpped2a (ENSMAMG00000016266) #27	ENSMAMG00000026458 #28	ENSMAMG00000016336 #29	ENSMAMG00000016434 #30	ENSMAMG00000016453 #31	HACD3 (ENSMAMG00000016477) #32	SLC24A1 (ENSMAMG00000016511) #33	DENND4A (ENSMAMG00000016577) #34	socs4 (ENSMAMG00000016740) #35	wdhd1 (ENSMAMG00000016742) #36
Eupercaria	ANCESTRAL SPECIES	14	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00960000187709	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Tetraodontidae	ANCESTRAL SPECIES	4	ENSGT00940000157405.c.b	ENSGT00390000001680 #7	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Tetraodon	MODERN SPECIES	20	hsd17b12b (ENSTNIG00000009599)	LRRC4C (ENSTNIG00000009600)	apip (ENSTNIG00000009601) #7	slc1a2a (ENSTNIG00000009602) #8	ENSTNIG00000009603 #9	slc35c1 (ENSTNIG00000009604) #10	chst1 (ENSTNIG00000009605) #11	ENSTNIG00000009606 #12	MAPK8IP1 (ENSTNIG00000009607) #14	ENSTNIG00000000788 #15	lrp4 (ENSTNIG00000009608) #16	NELL1 (ENSTNIG00000009609) #18	slc6a5 (ENSTNIG00000009610) #19	prmt3 (ENSTNIG00000009611) #20	htatip2 (ENSTNIG00000009612) #21	dbx1a (ENSTNIG00000009613) #22	NAV2 (ENSTNIG00000009614) #23	e2f8 (ENSTNIG00000009615) #24	csrp3 (ENSTNIG00000009616) #25	zdhhc13 (ENSTNIG00000002121) #26	mpped2a (ENSTNIG00000005247) #27	ENSTNIG00000005152 #28	ENSTNIG00000005151 #29	NR2E3 (ENSTNIG00000005150) #30	HACD3 (ENSTNIG00000001644) #32	SLC24A1 (ENSTNIG00000018806) #33	dennd4a (ENSTNIG00000018805) #34	socs4 (ENSTNIG00000002432) #35	wdhd1 (ENSTNIG00000018803) #36	gch1 (ENSTNIG00000018802) #37	SAMD4A (ENSTNIG00000018801)
Fugu	MODERN SPECIES	4	ENSTRUG00000032668	LRRC4C (ENSTRUG00000016255)	apip (ENSTRUG00000016253) #7	slc1a2a (ENSTRUG00000016239) #8	ENSTRUG00000016200 #9	slc35c1 (ENSTRUG00000022396) #10	chst1 (ENSTRUG00000016194) #11	ENSTRUG00000016184 #12	MAPK8IP1 (ENSTRUG00000021709) #14	ENSTRUG00000016170 #15	ENSTRUG00000020682 #17	NELL1 (ENSTRUG00000016017) #18	slc6a5 (ENSTRUG00000015944) #19	prmt3 (ENSTRUG00000015904) #20	htatip2 (ENSTRUG00000015893) #21	dbx1a (ENSTRUG00000015886) #22	NAV2 (ENSTRUG00000027383) #23	e2f8 (ENSTRUG00000015792) #24	csrp3 (ENSTRUG00000015766) #25	zdhhc13 (ENSTRUG00000015707) #26	mpped2a (ENSTRUG00000015686) #27	ENSTRUG00000020949 #28	ENSTRUG00000015637 #29	NR2E3 (ENSTRUG00000015582) #30	slc22a18 (ENSTRUG00000015561) #31	HACD3 (ENSTRUG00000015510) #32	SLC24A1 (ENSTRUG00000015482) #33	dennd4a (ENSTRUG00000015436) #34	socs4 (ENSTRUG00000015433) #35	wdhd1 (ENSTRUG00000015390) #36	gch1 (ENSTRUG00000015367) #37
Eupecaria_A	ANCESTRAL SPECIES	15	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00960000187709	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Ballan wrasse	MODERN SPECIES	417												ENSLBEG00000003635 #18	slc6a5 (ENSLBEG00000003684) #19	prmt3 (ENSLBEG00000003735) #20	htatip2 (ENSLBEG00000003818) #21	dbx1a (ENSLBEG00000003885) #22	ENSLBEG00000003908 #23	ENSLBEG00000003937	ENSLBEG00000003979 #23
Eupecaria_B	ANCESTRAL SPECIES	15	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00960000187709	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Perciformes	ANCESTRAL SPECIES	15	ENSGT00390000001680 #7	ENSGT00530000068132	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Perciformes_a	ANCESTRAL SPECIES	13	ENSGT00940000157405.c.b	ENSGT00390000001680 #7	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Channel bull blenny	MODERN SPECIES	17	slc1a2a (ENSCGOG00000001849) #8	ENSCGOG00000001839 #9	slc35c1 (ENSCGOG00000001834) #10	chst1 (ENSCGOG00000001830) #11	ENSCGOG00000001815 #12	ENSCGOG00000001811	MAPK8IP1 (ENSCGOG00000001798) #14	ENSCGOG00000001792 #15	lrp4 (ENSCGOG00000001539) #16	ENSCGOG00000001528 #17	NELL1 (ENSCGOG00000001335) #18	ENSCGOG00000001259	slc6a5 (ENSCGOG00000001258) #19	prmt3 (ENSCGOG00000001228) #20	htatip2 (ENSCGOG00000001220) #21	dbx1a (ENSCGOG00000001219) #22	ENSCGOG00000001218	NAV2 (ENSCGOG00000001167) #23	e2f8 (ENSCGOG00000001160) #24	csrp3 (ENSCGOG00000001159) #25	zdhhc13 (ENSCGOG00000001121) #26	mpped2a (ENSCGOG00000001116) #27	ENSCGOG00000001115 #28	ENSCGOG00000001114 #29	NR2E3 (ENSCGOG00000001111) #30	slc22a18 (ENSCGOG00000001108) #31	HACD3 (ENSCGOG00000001094) #32	SLC24A1 (ENSCGOG00000001085) #33	dennd4a (ENSCGOG00000000880) #34	socs4 (ENSCGOG00000000851) #35	wdhd1 (ENSCGOG00000000697) #36
Pike perch	MODERN SPECIES	42	mrps28 (ENSSLUG00000010412)	ENSSLUG00000010415 #15	ADORA3 (ENSSLUG00000010418)	lrp4 (ENSSLUG00000010452) #16	NELL1 (ENSSLUG00000010716) #18	ENSSLUG00000012808 #17	ADORA3 (ENSSLUG00000012818)	ADORA3 (ENSSLUG00000012823)	ENSSLUG00000012826	ENSSLUG00000012830	ENSSLUG00000012834	slc6a5 (ENSSLUG00000012844) #19	prmt3 (ENSSLUG00000012890) #20	ENSSLUG00000013285	htatip2 (ENSSLUG00000013292) #21	dbx1a (ENSSLUG00000013296) #22	e2f8 (ENSSLUG00000013361) #24	csrp3 (ENSSLUG00000013375) #25	zdhhc13 (ENSSLUG00000013411) #26	slc18b1 (ENSSLUG00000014147)	mpped2a (ENSSLUG00000014219) #27	ENSSLUG00000014232 #28	ENSSLUG00000014234 #29	NR2E3 (ENSSLUG00000014245) #30	slc22a18 (ENSSLUG00000014266) #31	HACD3 (ENSSLUG00000014295) #32	SLC24A1 (ENSSLUG00000014312) #33	dennd4a (ENSSLUG00000014340) #34	socs4 (ENSSLUG00000014357) #35	wdhd1 (ENSSLUG00000014371) #36	gch1 (ENSSLUG00000014411) #37
Cottioidei	ANCESTRAL SPECIES	13	ENSGT00940000157405.c.b	ENSGT00390000001680 #7	ENSGT00530000068132	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00390000006548.a.a	ENSGT00940000155628	ENSGT00940000155889.c	ENSGT00940000156684
Stickleback	MODERN SPECIES	312																dbx1a (ENSGACG00000000220) #22
Lumpfish	MODERN SPECIES	18	ENSCLMG00005000663	LRRC4C (ENSCLMG00005000661)	apip (ENSCLMG00005000659) #7	slc1a2a (ENSCLMG00005000655) #8	PAMR1 (ENSCLMG00005000650) #9	slc35c1 (ENSCLMG00005000644) #10	ENSCLMG00005000620 #12	MAPK8IP1 (ENSCLMG00005000568) #14	A3GALT2 (ENSCLMG00005000561) #15	lrp4 (ENSCLMG00005000551) #16	ENSCLMG00005000542	NELL1 (ENSCLMG00005000055) #18	slc6a5 (ENSCLMG00005022683) #19	prmt3 (ENSCLMG00005022681) #20	htatip2 (ENSCLMG00005022680) #21	dbx1a (ENSCLMG00005022679) #22	NAV2 (ENSCLMG00005022639) #23	e2f8 (ENSCLMG00005022617) #24	csrp3 (ENSCLMG00005022611) #25	zdhhc13 (ENSCLMG00005022516) #26	mpped2a (ENSCLMG00005022511) #27	ENSCLMG00005022510 #28	ENSCLMG00005022507 #29	NR2E3 (ENSCLMG00005022505) #30	slc22a18 (ENSCLMG00005022504) #31	HACD3 (ENSCLMG00005022503) #32	SLC24A1 (ENSCLMG00005022502) #33	rps17 (ENSCLMG00005022501)	csnk1g1 (ENSCLMG00005022489)	SNX1 (ENSCLMG00005022487)	neo1a (ENSCLMG00005021604)
Eupecaria_C	ANCESTRAL SPECIES	11	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00960000187709	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00810000125439.A #18	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	7	ENSGT00940000155379.g.a #8	ENSGT00940000154234.a.d #9	ENSGT00390000013315 #10	ENSGT00940000161262.a #11	ENSGT00940000157530.b.b #12	ENSGT00940000157530.b.a ##12	ENSGT00960000187709	ENSGT00940000157089.B #14	ENSGT00950000182858.C.f #15	ENSGT00940000158287 #16	ENSGT00940000163467.a.b.b.a.b #17	ENSGT00810000125439.A #18	ENSGT00940000154963 #19	ENSGT00940000156825 #20	ENSGT00390000008184 #21	ENSGT00950000183093.B.a.b #22	ENSGT00940000155663.f.b #23	ENSGT00940000158651 #24	ENSGT00940000159533 #25	ENSGT00530000063074.b.a #26	ENSGT00390000007681.b.a.a #27	ENSGT00940000160967.f #28	ENSGT00940000153246.a.a.a.d #29	ENSGT00940000156926.d #30	ENSGT00940000160333 #31	ENSGT00530000062962.b.a.e #32	ENSGT01030000234532.B.e.b.e #33	ENSGT00940000155836.B #34	ENSGT00940000166202 #35	ENSGT00390000002030 #36	ENSGT00390000013481.c.a #37
European seabass	MODERN SPECIES	18	ENSDLAG00005023170 #9	ENSDLAG00005033046 #10	ENSDLAG00005027746 #11	ENSDLAG00005031403 #12	ENSDLAG00005023185 ##12	ENSDLAG00005023230	ENSDLAG00005026530 #14	ENSDLAG00005031681 #16	ENSDLAG00005030258 #16	ENSDLAG00005012296 #17	NELL1 (ENSDLAG00005009953) #18	ENSDLAG00005012301	slc6a5 (ENSDLAG00005012316) #19	prmt3 (ENSDLAG00005012846) #20	htatip2 (ENSDLAG00005012965) #21	dbx1a (ENSDLAG00005012977) #22	NAV2 (ENSDLAG00005013065) #23	e2f8 (ENSDLAG00005015998) #24	csrp3 (ENSDLAG00005032855) #25	zdhhc13 (ENSDLAG00005016050) #26	mpped2a (ENSDLAG00005017487) #27	ENSDLAG00005026438	ENSDLAG00005031744 #28	ENSDLAG00005017548 #29	ENSDLAG00005017617 #30	ENSDLAG00005030198 #31	HACD3 (ENSDLAG00005032938) #32	SLC24A1 (ENSDLAG00005029857) #33	DENND4A (ENSDLAG00005017811) #34	socs4 (ENSDLAG00005031594) #35	wdhd1 (ENSDLAG00005018377) #36
Large yellow croaker	MODERN SPECIES	480	ENSLCRG00005019028	ctsd (ENSLCRG00005019034)	ENSLCRG00005019375	drd4b (ENSLCRG00005019376)	sirt3 (ENSLCRG00005019378)	psmd13 (ENSLCRG00005019383)	ENSLCRG00005019397	ZNF319 (ENSLCRG00005019398)	csnk2a2a (ENSLCRG00005019401)	MATCAP1 (ENSLCRG00005019438)	zgc:194679 (ENSLCRG00005019440)	zgc:194679 (ENSLCRG00005019441)	zgc:194679 (ENSLCRG00005019443)	ENSLCRG00005019444	htatip2 (ENSLCRG00005019446) #21	dbx1a (ENSLCRG00005019448) #22	NAV2 (ENSLCRG00005019450) #23	ENSLCRG00005019452	e2f8 (ENSLCRG00005002371) #24	zdhhc13 (ENSLCRG00005002405) #26	csrp3 (ENSLCRG00005002604) #25	mpped2a (ENSLCRG00005002608) #27	ENSLCRG00005002609 #28	ENSLCRG00005002613 #29	NR2E3 (ENSLCRG00005002635) #30	slc22a18 (ENSLCRG00005002671) #31	HACD3 (ENSLCRG00005002710) #32	SLC24A1 (ENSLCRG00005002811) #33	dennd4a (ENSLCRG00005002845) #34	socs4 (ENSLCRG00005002924) #35	gch1 (ENSLCRG00005002929) #37
Gilthead seabream	MODERN SPECIES	18	PAMR1 (ENSSAUG00010023923) #9	slc35c1 (ENSSAUG00010023924) #10	chst1 (ENSSAUG00010023926) #11	ENSSAUG00010023927 #12	ENSSAUG00010023928 ##12	ENSSAUG00010023929	MAPK8IP1 (ENSSAUG00010023930) #14	ENSSAUG00010004148 #15	lrp4 (ENSSAUG00010004401) #16	NELL1 (ENSSAUG00010008045) #18	ENSSAUG00010010809 #17	ENSSAUG00010010810	slc6a5 (ENSSAUG00010010819) #19	prmt3 (ENSSAUG00010011691) #20	htatip2 (ENSSAUG00010011716) #21	dbx1a (ENSSAUG00010011720) #22	NAV2 (ENSSAUG00010011732) #23	e2f8 (ENSSAUG00010011743) #24	csrp3 (ENSSAUG00010011751) #25	zdhhc13 (ENSSAUG00010011756) #26	mpped2a (ENSSAUG00010011765) #27	ENSSAUG00010011775 #28	ENSSAUG00010011783 #29	NR2E3 (ENSSAUG00010011796) #30	slc22a18 (ENSSAUG00010011801) #31	HACD3 (ENSSAUG00010011805) #32	SLC24A1 (ENSSAUG00010011812) #33	dennd4a (ENSSAUG00010011836) #34	GFUS (ENSSAUG00010012034)	socs4 (ENSSAUG00010012526) #35	wdhd1 (ENSSAUG00010012535) #36
Tiger tail seahorse	MODERN SPECIES	256	cep89 (ENSHCOG00000005696)	zgc:165481 (ENSHCOG00000005669)	ABCC12 (ENSHCOG00000005660)	ENSHCOG00000005605	ENSHCOG00000005584	ENSHCOG00000005540	ENSHCOG00000005529	SLCO3A1 (ENSHCOG00000005517)	ENSHCOG00000000704 #12	MAPK8IP1 (ENSHCOG00000005476) #14	lrp4 (ENSHCOG00000005440) #16	NELL1 (ENSHCOG00000005389) #18	slc6a5 (ENSHCOG00000005358) #19	prmt3 (ENSHCOG00000005337) #20	htatip2 (ENSHCOG00000005326) #21	dbx1a (ENSHCOG00000005312) #22	NAV2 (ENSHCOG00000005236) #23	slc10a2 (ENSHCOG00000005174)	e2f8 (ENSHCOG00000005132) #24	csrp3 (ENSHCOG00000005117) #25	zdhhc13 (ENSHCOG00000005101) #26	mpped2a (ENSHCOG00000005088) #27	ENSHCOG00000005065 #28	ENSHCOG00000000830 #29	NR2E3 (ENSHCOG00000000127) #30	dhodh (ENSHCOG00000004903)	ENSHCOG00000004872	dpep1 (ENSHCOG00000004863)	sult5a1 (ENSHCOG00000004854)	SLC22A31 (ENSHCOG00000004838)	ENSHCOG00000004814