Sarcopterygii	ANCESTRAL SPECIES	169				ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT00940000155533.d	ENSGT00940000154766.a.a	ENSGT00940000166969.b
Tetrapoda	ANCESTRAL SPECIES	97				ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01030000235349	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.a
Amniota	ANCESTRAL SPECIES	3	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01030000235349	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.a
Mammalia	ANCESTRAL SPECIES	65	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01030000235349	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.a
Theria	ANCESTRAL SPECIES	11	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.a
Eutheria	ANCESTRAL SPECIES	6	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.a
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00960000191710	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00960000191710	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Primates	ANCESTRAL SPECIES	8	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00960000191710	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00390000002325	ENSGT00940000160429 #19	ENSGT00910000147015 #20	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988.u.b	ENSGT00390000000183
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00390000002325	ENSGT00940000160429 #19	ENSGT00910000147015 #20	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00910000147277	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988.u.b
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00390000002325	ENSGT00940000160429 #19	ENSGT00910000147015 #20	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00910000147277	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988.u.b
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00960000188468 #12	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00390000002325	ENSGT00940000160429 #19	ENSGT00910000147015 #20	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a.k.a #26	ENSGT00910000147277	ENSGT00940000153665.a.l ##26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a
Macaca	ANCESTRAL SPECIES	7	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00960000188468 #12	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00390000002325	ENSGT00890000139491.f	ENSGT00940000160429 #19	ENSGT00910000147015 #20	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00910000147277	ENSGT00940000153665.a.k.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988.u.b
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00960000188468 #12	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00390000002325	ENSGT01100000263493.a.b.a.b.a.b.a.a.a.a.b #17	ENSGT00940000160429 #19	ENSGT00910000147015 #20	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a.k.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988.u.b	ENSGT00390000000183
Crab-eating macaque	MODERN SPECIES	16	TERT (ENSMFAG00000033142) #7	CLPTM1L (ENSMFAG00000039815) #8	ENSMFAG00000065048 #9	SLC6A3 (ENSMFAG00000003977) #10	ENSMFAG00000064340 #11	ENSMFAG00000047980 #12	ENSMFAG00000049680 #13	NDUFS6 (ENSMFAG00000032708) #14	IRX4 (ENSMFAG00000044841) #15	IRX2 (ENSMFAG00000064595) #16	ENSMFAG00000047364 #17	ENSMFAG00000055380 #18	IRX1 (ENSMFAG00000001989) #19	ENSMFAG00000052395 #20	ADAMTS16 (ENSMFAG00000000579) #21	ICE1 (ENSMFAG00000037172) #22	MED10 (ENSMFAG00000036824) #23	ENSMFAG00000054504 #24	UBE2QL1 (ENSMFAG00000050565) #25	NSUN2 (ENSMFAG00000045240) #26	SRD5A1 (ENSMFAG00000002749) #27	TENT4A (ENSMFAG00000038658) #28	ENSMFAG00000056143 #29	ENSMFAG00000060338 #30	ENSMFAG00000056296 #31	ADCY2 (ENSMFAG00000001655) #32	ENSMFAG00000051771 #33	CFAP90 (ENSMFAG00000036254) #34	FASTKD3 (ENSMFAG00000040312) #35	MTRR (ENSMFAG00000036712) #36	SEMA5A (ENSMFAG00000038895) #37
Rhesus	MODERN SPECIES	16	SLC6A18 (ENSMMUG00000010938)	TERT (ENSMMUG00000010940) #7	CLPTM1L (ENSMMUG00000005193) #8	SLC6A3 (ENSMMUG00000005198) #10	LPCAT1 (ENSMMUG00000005199)	ENSMMUG00000059497 ##11	MRPL36 (ENSMMUG00000004451) #13	NDUFS6 (ENSMMUG00000004447) #14	IRX4 (ENSMMUG00000004220) #15	ENSMMUG00000057427	IRX2 (ENSMMUG00000005802) #16	ENSMMUG00000015889	ENSMMUG00000050148 #17	IRX1 (ENSMMUG00000002613) #19	ADAMTS16 (ENSMMUG00000019205) #21	ICE1 (ENSMMUG00000001063) #22	ENSMMUG00000064022	MED10 (ENSMMUG00000051644) #23	UBE2QL1 (ENSMMUG00000055877) #25	NSUN2 (ENSMMUG00000002561) #26	SRD5A1 (ENSMMUG00000013186) #27	TENT4A (ENSMMUG00000013189) #28	ENSMMUG00000058512	ENSMMUG00000063097 ##29	ADCY2 (ENSMMUG00000018742) #32	CFAP90 (ENSMMUG00000018745) #34	FASTKD3 (ENSMMUG00000018746) #35	MTRR (ENSMMUG00000018747) #36	SEMA5A (ENSMMUG00000020160) #37	TAS2R1 (ENSMMUG00000058066)	ENSMMUG00000064218
Pig-tailed macaque	MODERN SPECIES	156													IRX1 (ENSMNEG00000030402) #19	ENSMNEG00000008964 #20	ADAMTS16 (ENSMNEG00000038384) #21	ICE1 (ENSMNEG00000035013) #22	MED10 (ENSMNEG00000030169) #23	UBE2QL1 (ENSMNEG00000041286) #25	ENSMNEG00000037437	NSUN2 (ENSMNEG00000033485) #26	SRD5A1 (ENSMNEG00000040802) #27	TENT4A (ENSMNEG00000029090) #28	ADCY2 (ENSMNEG00000045116) #32	CFAP90 (ENSMNEG00000036392) #34	FASTKD3 (ENSMNEG00000017265) #35	MTRR (ENSMNEG00000043016) #36	SEMA5A (ENSMNEG00000043946) #37	ENSMNEG00000041629	ATPSCKMT (ENSMNEG00000029572)	CCT5 (ENSMNEG00000037967)	CMBL (ENSMNEG00000015077)
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00960000188468 #12	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00390000002325	ENSGT00940000160429 #19	ENSGT00910000147015 #20	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00910000147277	ENSGT00940000153665.a.l ##26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988.u.b	ENSGT00390000000183
Olive baboon	MODERN SPECIES	15	SLC6A18 (ENSPANG00000014913)	SLC6A19 (ENSPANG00000012179)	SLC12A7 (ENSPANG00000025613)	NKD2 (ENSPANG00000012309)	TRIP13 (ENSPANG00000020838)	BRD9 (ENSPANG00000004217)	ENSPANG00000023865 #12	MRPL36 (ENSPANG00000046315) #13	NDUFS6 (ENSPANG00000021407) #14	IRX4 (ENSPANG00000014386) #15	ENSPANG00000039393	IRX2 (ENSPANG00000003730) #16	ENSPANG00000004028	IRX1 (ENSPANG00000019076) #19	ADAMTS16 (ENSPANG00000014911) #21	ICE1 (ENSPANG00000050694) #22	MED10 (ENSPANG00000016714) #23	UBE2QL1 (ENSPANG00000015779) #25	NSUN2 (ENSPANG00000004215) ##26	SRD5A1 (ENSPANG00000010793) #27	TENT4A (ENSPANG00000004005) #28	ADCY2 (ENSPANG00000014159) #32	CFAP90 (ENSPANG00000003028) #34	FASTKD3 (ENSPANG00000004214) #35	MTRR (ENSPANG00000014385) #36	ENSPANG00000039496	SEMA5A (ENSPANG00000012025) #37	TAS2R1 (ENSPANG00000047467)	ATPSCKMT (ENSPANG00000015778)	CCT5 (ENSPANG00000006999)	CMBL (ENSPANG00000004379)
Cercopithecinae_d	ANCESTRAL SPECIES	117		ENSGT00940000161608.n	ENSGT00940000153875.c	ENSGT00530000063884.a	ENSGT00940000158616	ENSGT01030000234613.a.a	ENSGT00940000154486.a.b	ENSGT00940000160982	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00390000002325	ENSGT00940000160429 #19	ENSGT00910000147015 #20	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00910000147277	ENSGT00940000153665.a.l ##26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00910000147919	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988.u.b	ENSGT00390000000183
Drill	MODERN SPECIES	1627												NDUFS6 (ENSMLEG00000031436) #14	IRX4 (ENSMLEG00000008142) #15	ENSMLEG00000035820	ADAMTS16 (ENSMLEG00000034561) #21	ICE1 (ENSMLEG00000033241) #22	MED10 (ENSMLEG00000032308) #23	UBE2QL1 (ENSMLEG00000031870) #25	ENSMLEG00000031622	NSUN2 (ENSMLEG00000017173) ##26	SRD5A1 (ENSMLEG00000031030) #27	TENT4A (ENSMLEG00000030994) #28	ENSMLEG00000030823
Sooty mangabey	MODERN SPECIES	651		ENSCATG00000034475	TPPP (ENSCATG00000044991)	CEP72 (ENSCATG00000032209)	SLC9A3 (ENSCATG00000039469)	EXOC3 (ENSCATG00000009813)	AHRR (ENSCATG00000044957)	PDCD6 (ENSCATG00000043812)	NDUFS6 (ENSCATG00000032465) #14	IRX4 (ENSCATG00000031325) #15	IRX2 (ENSCATG00000007699) #16	ENSCATG00000003877	IRX1 (ENSCATG00000039676) #19	ENSCATG00000015549 #20	ADAMTS16 (ENSCATG00000010955) #21	ICE1 (ENSCATG00000039347) #22	MED10 (ENSCATG00000041948) #23	UBE2QL1 (ENSCATG00000032120) #25	ENSCATG00000029481	ENSCATG00000045020 ##26	SRD5A1 (ENSCATG00000031904) #27	TENT4A (ENSCATG00000034531) #28	ENSCATG00000042677	ADCY2 (ENSCATG00000033939) #32	CFAP90 (ENSCATG00000036277) #34	FASTKD3 (ENSCATG00000028957) #35	MTRR (ENSCATG00000045027) #36	SEMA5A (ENSCATG00000042404) #37	ENSCATG00000029390	ATPSCKMT (ENSCATG00000040712)	CCT5 (ENSCATG00000030742)
Vervet Monkey	MODERN SPECIES	23	NKD2 (ENSCSAG00000017405)	SLC12A7 (ENSCSAG00000017399)	SLC6A19 (ENSCSAG00000017393)	SLC6A18 (ENSCSAG00000017392)	TERT (ENSCSAG00000017381) #7	CLPTM1L (ENSCSAG00000017368) #8	SLC6A3 (ENSCSAG00000017367) #10	LPCAT1 (ENSCSAG00000017363)	MRPL36 (ENSCSAG00000018986) #13	NDUFS6 (ENSCSAG00000017360) #14	IRX4 (ENSCSAG00000017357) #15	IRX2 (ENSCSAG00000017353) #16	ENSCSAG00000017351	IRX1 (ENSCSAG00000017349) #19	ADAMTS16 (ENSCSAG00000017347) #21	ICE1 (ENSCSAG00000017344) #22	MED10 (ENSCSAG00000017342) #23	UBE2QL1 (ENSCSAG00000017341) #25	NSUN2 (ENSCSAG00000017339) #26	SRD5A1 (ENSCSAG00000017337) #27	TENT4A (ENSCSAG00000017336) #28	ADCY2 (ENSCSAG00000017334) #32	CFAP90 (ENSCSAG00000017332) #34	FASTKD3 (ENSCSAG00000017331) #35	MTRR (ENSCSAG00000017329) #36	SEMA5A (ENSCSAG00000017328) #37	TAS2R1 (ENSCSAG00000018987)	ATPSCKMT (ENSCSAG00000017326)	CCT5 (ENSCSAG00000017323)	CMBL (ENSCSAG00000017321)	MARCHF6 (ENSCSAG00000017319)
Rhinopithecus	ANCESTRAL SPECIES	309									ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00390000002325	ENSGT00940000160429 #19	ENSGT00910000147015 #20	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00910000147277	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36
Black snub-nosed monkey	MODERN SPECIES	2428																ICE1 (ENSRBIG00000027772) #22	MED10 (ENSRBIG00000042305) #23	UBE2QL1 (ENSRBIG00000031668) #25	ENSRBIG00000036497	NSUN2 (ENSRBIG00000035794) #26	SRD5A1 (ENSRBIG00000035766) #27
Golden snub-nosed monkey	MODERN SPECIES	1911										IRX4 (ENSRROG00000038516) #15	IRX2 (ENSRROG00000029509) #16	ENSRROG00000031597	IRX1 (ENSRROG00000027117) #19	ENSRROG00000030016 #20	ADAMTS16 (ENSRROG00000030301) #21	ICE1 (ENSRROG00000031153) #22	MED10 (ENSRROG00000032049) #23	UBE2QL1 (ENSRROG00000030330) #25	ENSRROG00000032289	NSUN2 (ENSRROG00000035277) #26	ENSRROG00000039857
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00390000002325	ENSGT00890000139491.f	ENSGT00940000160429 #19	ENSGT00910000147015 #20	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b.l #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988.u.b	ENSGT00390000000183	ENSGT00940000155171.a.b
Hominidae	ANCESTRAL SPECIES	7	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00390000002325	ENSGT00890000139491.f	ENSGT00940000160429 #19	ENSGT00910000147015 #20	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b.l #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988.u.b	ENSGT00390000000183	ENSGT00940000155171.a.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866.i.a #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00390000002325	ENSGT00890000139491.f	ENSGT00940000160429 #19	ENSGT00910000147015 #20	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b.l #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988.u.b	ENSGT00390000000183	ENSGT00940000155171.a.b
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866.i.a #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00390000002325	ENSGT00890000139491.f	ENSGT00940000160429 #19	ENSGT00910000147015 #20	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b.l #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988.u.b	ENSGT00390000000183	ENSGT00940000155171.a.b
Pan	ANCESTRAL SPECIES	21	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531.g #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866.i.a #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00390000002325	ENSGT00890000139491.f	ENSGT00940000160429 #19	ENSGT00910000147015 #20	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b.l #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988.u.b	ENSGT00390000000183	ENSGT00940000155171.a.b
Chimpanzee	MODERN SPECIES	18	ENSPTRG00000044900 #7	TERT (ENSPTRG00000016696) #7	SLC6A3 (ENSPTRG00000016699) #10	ENSPTRG00000045264	LPCAT1 (ENSPTRG00000016701)	ENSPTRG00000051244	MRPL36 (ENSPTRG00000016705) #13	NDUFS6 (ENSPTRG00000016706) #14	IRX4 (ENSPTRG00000046893) #15	IRX2 (ENSPTRG00000016708) #16	IRX2-DT (ENSPTRG00000028783)	ENSPTRG00000050428	IRX1 (ENSPTRG00000016709) #19	ENSPTRG00000048810 #20	ADAMTS16 (ENSPTRG00000016710) #21	ICE1 (ENSPTRG00000016711) #22	MED10 (ENSPTRG00000016713) #23	UBE2QL1 (ENSPTRG00000033811) #25	NSUN2 (ENSPTRG00000016715) #26	SRD5A1 (ENSPTRG00000016716) #27	TENT4A (ENSPTRG00000016717) #28	ENSPTRG00000051937	ADCY2 (ENSPTRG00000049665) #32	CFAP90 (ENSPTRG00000034032) #34	FASTKD3 (ENSPTRG00000016720) #35	MTRR (ENSPTRG00000016721) #36	SEMA5A (ENSPTRG00000016722) #37	TAS2R1 (ENSPTRG00000016723)	ATPSCKMT (ENSPTRG00000016724)	CCT5 (ENSPTRG00000016725)	CMBL (ENSPTRG00000045109)
Bonobo	MODERN SPECIES	18	SLC12A7 (ENSPPAG00000029396)	SLC6A19 (ENSPPAG00000038033)	SLC6A18 (ENSPPAG00000031319)	TERT (ENSPPAG00000029560) #7	CLPTM1L (ENSPPAG00000015621) #8	SLC6A3 (ENSPPAG00000027557) #10	LPCAT1 (ENSPPAG00000041910)	MRPL36 (ENSPPAG00000012362) #13	ENSPPAG00000038799 #14	IRX4 (ENSPPAG00000008767) #15	ENSPPAG00000035929	ENSPPAG00000031042	IRX1 (ENSPPAG00000038233) #19	ENSPPAG00000039847 #20	ADAMTS16 (ENSPPAG00000041798) #21	ICE1 (ENSPPAG00000039831) #22	MED10 (ENSPPAG00000031009) #23	NSUN2 (ENSPPAG00000036124) #26	SRD5A1 (ENSPPAG00000038450) #27	ENSPPAG00000034356 #28	ADCY2 (ENSPPAG00000035118) #32	CFAP90 (ENSPPAG00000041883) #34	FASTKD3 (ENSPPAG00000036254) #35	MTRR (ENSPPAG00000043987) #36	SEMA5A (ENSPPAG00000043389) #37	TAS2R1 (ENSPPAG00000010439)	ATPSCKMT (ENSPPAG00000042235)	CCT5 (ENSPPAG00000029058)	CMBL (ENSPPAG00000033069)	MARCHF6 (ENSPPAG00000036651)	ROPN1L (ENSPPAG00000027569)
Human	MODERN SPECIES	17	TRIP13 (ENSG00000071539)	NKD2 (ENSG00000145506)	SLC12A7 (ENSG00000113504)	SLC6A19 (ENSG00000174358)	SLC6A18 (ENSG00000164363)	TERT (ENSG00000164362) #7	CLPTM1L (ENSG00000049656) #8	SLC6A3 (ENSG00000142319) #10	LPCAT1 (ENSG00000153395)	MRPL36 (ENSG00000171421) #13	NDUFS6 (ENSG00000145494) #14	IRX4 (ENSG00000113430) #15	IRX2 (ENSG00000170561) #16	IRX1 (ENSG00000170549) #19	ADAMTS16 (ENSG00000145536) #21	ICE1 (ENSG00000164151) #22	MED10 (ENSG00000133398) #23	UBE2QL1 (ENSG00000215218) #25	NSUN2 (ENSG00000037474) #26	SRD5A1 (ENSG00000145545) #27	TENT4A (ENSG00000112941) #28	ADCY2 (ENSG00000078295) #32	CFAP90 (ENSG00000215217) #34	MTRR (ENSG00000124275) #36	FASTKD3 (ENSG00000124279) #35	SEMA5A (ENSG00000112902) #37	TAS2R1 (ENSG00000169777)	ATPSCKMT (ENSG00000150756)	CCT5 (ENSG00000150753)	CMBL (ENSG00000164237)	MARCHF6 (ENSG00000145495)
Gorilla	MODERN SPECIES	8	ENSGGOG00000038696	TERT (ENSGGOG00000002607) #7	CLPTM1L (ENSGGOG00000015622) #8	SLC6A3 (ENSGGOG00000015631) #10	LPCAT1 (ENSGGOG00000015639)	ENSGGOG00000016949 #13	NDUFS6 (ENSGGOG00000016951) #14	ENSGGOG00000039292 #15	IRX2 (ENSGGOG00000015712) #16	ENSGGOG00000015708	ENSGGOG00000040574	ENSGGOG00000042850 #19	ENSGGOG00000042745 #19	ENSGGOG00000039993 #20	ADAMTS16 (ENSGGOG00000014865) #21	ICE1 (ENSGGOG00000025867) #22	MED10 (ENSGGOG00000003086) #23	UBE2QL1 (ENSGGOG00000024242) #25	NSUN2 (ENSGGOG00000016583) #26	SRD5A1 (ENSGGOG00000016593) #27	TENT4A (ENSGGOG00000013866) #28	ENSGGOG00000025545	ENSGGOG00000043809	ADCY2 (ENSGGOG00000011188) #32	CFAP90 (ENSGGOG00000011202) #34	FASTKD3 (ENSGGOG00000015994) #35	MTRR (ENSGGOG00000000958) #36	SEMA5A (ENSGGOG00000011428) #37	TAS2R1 (ENSGGOG00000013791)	ATPSCKMT (ENSGGOG00000014109)	CCT5 (ENSGGOG00000024064)
Orangutan	MODERN SPECIES	18	SLC6A19 (ENSPPYG00000015313)	SLC6A18 (ENSPPYG00000015314)	ENSPPYG00000015315 #7	ENSPPYG00000039637 #7	CLPTM1L (ENSPPYG00000015316) #8	SLC6A3 (ENSPPYG00000015318) #10	LPCAT1 (ENSPPYG00000015319)	ENSPPYG00000031434	MRPL36 (ENSPPYG00000015322) #13	ENSPPYG00000015323 #14	IRX4 (ENSPPYG00000015324) #15	IRX2 (ENSPPYG00000015325) #16	ENSPPYG00000015326	ENSPPYG00000015327 #19	ADAMTS16 (ENSPPYG00000015328) #21	ICE1 (ENSPPYG00000015329) #22	MED10 (ENSPPYG00000015330) #23	UBE2QL1 (ENSPPYG00000015331) #25	NSUN2 (ENSPPYG00000015332) #26	SRD5A1 (ENSPPYG00000031135) #27	TENT4A (ENSPPYG00000015334) #28	ADCY2 (ENSPPYG00000015335) #32	ENSPPYG00000015336 #34	FASTKD3 (ENSPPYG00000015337) #35	MTRR (ENSPPYG00000015338) #36	SEMA5A (ENSPPYG00000015339) #37	TAS2R1 (ENSPPYG00000015340)	ATPSCKMT (ENSPPYG00000015341)	CCT5 (ENSPPYG00000015342)	CMBL (ENSPPYG00000015343)	MARCHF6 (ENSPPYG00000015344)
Gibbon	MODERN SPECIES	21	ENSNLEG00000011012	SLC12A7 (ENSNLEG00000011016)	SLC6A19 (ENSNLEG00000026638)	SLC6A18 (ENSNLEG00000011105)	TERT (ENSNLEG00000011118) #7	CLPTM1L (ENSNLEG00000011133) #8	SLC6A3 (ENSNLEG00000011157) #10	LPCAT1 (ENSNLEG00000011167)	MRPL36 (ENSNLEG00000011197) #13	ENSNLEG00000011199 #14	ENSNLEG00000011213 #15	IRX2 (ENSNLEG00000011219) #16	ENSNLEG00000011229	ENSNLEG00000027652	ADAMTS16 (ENSNLEG00000011241) #21	ICE1 (ENSNLEG00000011296) #22	MED10 (ENSNLEG00000034999) #23	NSUN2 (ENSNLEG00000011344) #26	ENSNLEG00000011414 #27	TENT4A (ENSNLEG00000011434) #28	ADCY2 (ENSNLEG00000011468) #32	CFAP90 (ENSNLEG00000011506) #34	FASTKD3 (ENSNLEG00000011510) #35	MTRR (ENSNLEG00000011522) #36	SEMA5A (ENSNLEG00000011566) #37	ATPSCKMT (ENSNLEG00000027427)	CCT5 (ENSNLEG00000032559)	CMBL (ENSNLEG00000011601)	MARCHF6 (ENSNLEG00000011608)	ROPN1L (ENSNLEG00000011687)	ENSNLEG00000032298
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183.l	ENSGT00940000155171.a.b
Cebidae	ANCESTRAL SPECIES	6	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183.l	ENSGT00940000155171.a.b
Cebidae_a	ANCESTRAL SPECIES	82	ENSGT00950000183170.b.a	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183.l	ENSGT00940000155171.a.b	ENSGT00390000012731.a.a
Capuchin	MODERN SPECIES	185													IRX2 (ENSCCAG00000024198) #16	IRX1 (ENSCCAG00000033188) #19	ADAMTS16 (ENSCCAG00000027839) #21	ICE1 (ENSCCAG00000027588) #22	MED10 (ENSCCAG00000034010) #23	UBE2QL1 (ENSCCAG00000021337) #25	ENSCCAG00000025648 #26	SRD5A1 (ENSCCAG00000026779) #27	TENT4A (ENSCCAG00000006730) #28
Bolivian squirrel monkey	MODERN SPECIES	92	ENSSBOG00000025272	BRD9 (ENSSBOG00000003529)	TRIP13 (ENSSBOG00000026544)	NKD2 (ENSSBOG00000027973)	SLC12A7 (ENSSBOG00000021997)	SLC6A19 (ENSSBOG00000024736)	SLC6A18 (ENSSBOG00000025040)	TERT (ENSSBOG00000030569) #7	CLPTM1L (ENSSBOG00000027261) #8	SLC6A3 (ENSSBOG00000018794) #10	LPCAT1 (ENSSBOG00000021403)	NDUFS6 (ENSSBOG00000029679) #14	IRX4 (ENSSBOG00000035465) #15	IRX1 (ENSSBOG00000031823) #19	ADAMTS16 (ENSSBOG00000031786) #21	ICE1 (ENSSBOG00000018773) #22	MED10 (ENSSBOG00000030219) #23	UBE2QL1 (ENSSBOG00000025393) #25	NSUN2 (ENSSBOG00000035262) #26	SRD5A1 (ENSSBOG00000032790) #27	TENT4A (ENSSBOG00000035549) #28	ADCY2 (ENSSBOG00000025740) #32	CFAP90 (ENSSBOG00000024374) #34	FASTKD3 (ENSSBOG00000020653) #35	MTRR (ENSSBOG00000028252) #36	SEMA5A (ENSSBOG00000032395) #37	ATPSCKMT (ENSSBOG00000021099)	CCT5 (ENSSBOG00000022734)	CMBL (ENSSBOG00000021093)	MARCHF6 (ENSSBOG00000020372)	ROPN1L (ENSSBOG00000021335)
Marmoset	MODERN SPECIES	11	NKD2 (ENSCJAG00000043259)	SLC12A7 (ENSCJAG00000077601)	SLC6A19 (ENSCJAG00000011196)	SLC6A18 (ENSCJAG00000036709)	TERT (ENSCJAG00000048026) #7	ENSCJAG00000047667 #8	SLC6A3 (ENSCJAG00000011089) #10	LPCAT1 (ENSCJAG00000011062)	ENSCJAG00000083587 #13	ENSCJAG00000075297 #14	IRX4 (ENSCJAG00000009376) #15	IRX2 (ENSCJAG00000008516) #16	IRX1 (ENSCJAG00000039020) #19	ENSCJAG00000086287	ADAMTS16 (ENSCJAG00000008588) #21	ICE1 (ENSCJAG00000008637) #22	MED10 (ENSCJAG00000008674) #23	UBE2QL1 (ENSCJAG00000008686) #25	NSUN2 (ENSCJAG00000008689) #26	SRD5A1 (ENSCJAG00000008724) #27	TENT4A (ENSCJAG00000008742) #28	ENSCJAG00000087014	ENSCJAG00000084205	ADCY2 (ENSCJAG00000008816) #32	CFAP90 (ENSCJAG00000076097) #34	FASTKD3 (ENSCJAG00000008921) #35	MTRR (ENSCJAG00000008934) #36	SEMA5A (ENSCJAG00000008962) #37	TAS2R1 (ENSCJAG00000077757)	ATPSCKMT (ENSCJAG00000070705)	ENSCJAG00000008977
Mas night monkey	MODERN SPECIES	837	NKD2 (ENSANAG00000018792)	SLC12A7 (ENSANAG00000033651)	SLC6A19 (ENSANAG00000030219)	SLC6A18 (ENSANAG00000031192)	TERT (ENSANAG00000032128) #7	CLPTM1L (ENSANAG00000027142) #8	SLC6A3 (ENSANAG00000027816) #10	LPCAT1 (ENSANAG00000027756)	NDUFS6 (ENSANAG00000009591) #14	IRX4 (ENSANAG00000023256) #15	IRX2 (ENSANAG00000023050) #16	ENSANAG00000036927	ENSANAG00000019516	IRX1 (ENSANAG00000032866) #19	ADAMTS16 (ENSANAG00000025438) #21	ICE1 (ENSANAG00000023554) #22	ENSANAG00000018766	MED10 (ENSANAG00000030701) #23	UBE2QL1 (ENSANAG00000025279) #25	NSUN2 (ENSANAG00000034451) #26	SRD5A1 (ENSANAG00000020870) #27	TENT4A (ENSANAG00000037806) #28	ADCY2 (ENSANAG00000023768) #32	CFAP90 (ENSANAG00000032842) #34	FASTKD3 (ENSANAG00000021217) #35	MTRR (ENSANAG00000023571) #36	SEMA5A (ENSANAG00000021223) #37	ATPSCKMT (ENSANAG00000022943)	CCT5 (ENSANAG00000026097)	CMBL (ENSANAG00000029875)	MARCHF6 (ENSANAG00000037794)
Tarsier	MODERN SPECIES	3067															ADAMTS16 (ENSTSYG00000004013) #21	ENSTSYG00000035233 #22
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00960000191710	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Lemuriformes	ANCESTRAL SPECIES	47	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00960000191710	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Lemuriformes_a	ANCESTRAL SPECIES	135	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00960000191710	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36
Greater bamboo lemur	MODERN SPECIES	11	ENSPSMG00000010472	NKD2 (ENSPSMG00000010442)	SLC12A7 (ENSPSMG00000010422)	SLC6A19 (ENSPSMG00000010402)	SLC6A18 (ENSPSMG00000010391)	ENSPSMG00000010376 #7	ENSPSMG00000010372	CLPTM1L (ENSPSMG00000010152) #8	SLC6A3 (ENSPSMG00000009991) #10	LPCAT1 (ENSPSMG00000009909)	NDUFS6 (ENSPSMG00000009866) #14	IRX4 (ENSPSMG00000009857) #15	IRX2 (ENSPSMG00000009849) #16	IRX1 (ENSPSMG00000009843) #19	ADAMTS16 (ENSPSMG00000009836) #21	ICE1 (ENSPSMG00000009793) #22	MED10 (ENSPSMG00000009767) #23	UBE2QL1 (ENSPSMG00000009761) #25	NSUN2 (ENSPSMG00000009727) #26	SRD5A1 (ENSPSMG00000009616) #27	TENT4A (ENSPSMG00000009588) #28	ADCY2 (ENSPSMG00000009550) #32	ENSPSMG00000009525 #34	FASTKD3 (ENSPSMG00000009521) #35	MTRR (ENSPSMG00000009513) #36	ENSPSMG00000009491 #37
Coquerels sifaka	MODERN SPECIES	515															ADAMTS16 (ENSPCOG00000015056) #21	ICE1 (ENSPCOG00000015680) #22	MED10 (ENSPCOG00000000065) #23	UBE2QL1 (ENSPCOG00000005715) #25	NSUN2 (ENSPCOG00000012979) #26	SRD5A1 (ENSPCOG00000001310) #27	ENSPCOG00000025593	TENT4A (ENSPCOG00000016295) #28
Mouse lemur	MODERN SPECIES	3	BRD9 (ENSMICG00000004306)	TRIP13 (ENSMICG00000028604)	NKD2 (ENSMICG00000029997)	SLC12A7 (ENSMICG00000028719)	SLC6A19 (ENSMICG00000033849)	SLC6A18 (ENSMICG00000010877)	TERT (ENSMICG00000010883) #7	CLPTM1L (ENSMICG00000000301) #8	SLC6A3 (ENSMICG00000017612) #10	LPCAT1 (ENSMICG00000032744)	NDUFS6 (ENSMICG00000014038) #14	IRX4 (ENSMICG00000029233) #15	IRX2 (ENSMICG00000013531) #16	IRX1 (ENSMICG00000011730) #19	ADAMTS16 (ENSMICG00000010718) #21	ICE1 (ENSMICG00000028221) #22	MED10 (ENSMICG00000013856) #23	UBE2QL1 (ENSMICG00000042851) #25	NSUN2 (ENSMICG00000016549) #26	SRD5A1 (ENSMICG00000016557) #27	TENT4A (ENSMICG00000016562) #28	ADCY2 (ENSMICG00000002952) #32	CFAP90 (ENSMICG00000034745) #34	FASTKD3 (ENSMICG00000002954) #35	MTRR (ENSMICG00000002955) #36	SEMA5A (ENSMICG00000002641) #37	ENSMICG00000010134	ATPSCKMT (ENSMICG00000043453)	CCT5 (ENSMICG00000000530)	CMBL (ENSMICG00000000533)	MARCHF6 (ENSMICG00000010632)
Bushbaby	MODERN SPECIES	303														IRX1 (ENSOGAG00000024732) #19	ADAMTS16 (ENSOGAG00000013842) #21	ICE1 (ENSOGAG00000029817) #22	MED10 (ENSOGAG00000005988) #23	UBE2QL1 (ENSOGAG00000032403) #25	NSUN2 (ENSOGAG00000015015) #26	SRD5A1 (ENSOGAG00000015026) #27	TENT4A (ENSOGAG00000015032) #28
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00960000191710	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Glires	ANCESTRAL SPECIES	7	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00960000191710	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Rodentia	ANCESTRAL SPECIES	7	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00960000191710	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Kangaroo rat	MODERN SPECIES	340	Cep72 (ENSDORG00000014412)	Tppp (ENSDORG00000000450)	Zdhhc11 (ENSDORG00000003485)	Brd9 (ENSDORG00000003483)	Trip13 (ENSDORG00000003482)	Nkd2 (ENSDORG00000012275)	Slc12a7 (ENSDORG00000012278)	Slc6a19 (ENSDORG00000029059)	Slc6a18 (ENSDORG00000011176)	Clptm1l (ENSDORG00000010439) #8	Slc6a3 (ENSDORG00000001501) #10	Lpcat1 (ENSDORG00000012382)	Ndufs6 (ENSDORG00000024296) #14	Irx4 (ENSDORG00000015537) #15	Adamts16 (ENSDORG00000013854) #21	ENSDORG00000025435 #22	ENSDORG00000008413 #23	Ube2ql1 (ENSDORG00000026589) #25	Nsun2 (ENSDORG00000010247) #26	Srd5a1 (ENSDORG00000010248) #27	Tent4a (ENSDORG00000023216) #28	Adcy2 (ENSDORG00000010924) #32	Cfap90 (ENSDORG00000013670) #34	Fastkd3 (ENSDORG00000028341) #35	ENSDORG00000030090 #36	Sema5a (ENSDORG00000009214) #37	Cct5 (ENSDORG00000008787)	Cmbl (ENSDORG00000008783)	Marchf6 (ENSDORG00000009942)	Ropn1l (ENSDORG00000004133)	Dap (ENSDORG00000023386)
Myomorpha	ANCESTRAL SPECIES	5	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Lesser Egyptian jerboa	MODERN SPECIES	128	Brd9 (ENSJJAG00000001706)	Zdhhc11 (ENSJJAG00000011440)	Tppp (ENSJJAG00000010294)	Cep72 (ENSJJAG00000008837)	Slc9a3 (ENSJJAG00000020607)	ENSJJAG00000020042	ENSJJAG00000017113	ENSJJAG00000015095	Hsd17b4 (ENSJJAG00000013321)	Ccnb1 (ENSJJAG00000007280)	Slc30a5 (ENSJJAG00000000942)	Pik3r1 (ENSJJAG00000020326)	Cd180 (ENSJJAG00000017107)	ENSJJAG00000011406	Adamts16 (ENSJJAG00000019243) #21	ENSJJAG00000010916 #22	ENSJJAG00000009945 #23	Ube2ql1 (ENSJJAG00000018046) #25	ENSJJAG00000017622	Nsun2 (ENSJJAG00000013996) #26	Srd5a1 (ENSJJAG00000009745) #27	Tent4a (ENSJJAG00000007205) #28
Muroidea	ANCESTRAL SPECIES	4	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000153165.a.b.a.a.a.a.a	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Upper Galilee mountains blind mole rat	MODERN SPECIES	891															Adamts16 (ENSNGAG00000022318) #21	ENSNGAG00000004793 #22	ENSNGAG00000012262	ENSNGAG00000012870	ENSNGAG00000013849 #23	Ube2ql1 (ENSNGAG00000014214) #25	Nsun2 (ENSNGAG00000007424) #26	Srd5a1 (ENSNGAG00000012895) #27	Tent4a (ENSNGAG00000006352) #28	Adcy2 (ENSNGAG00000018235) #32	Cfap90 (ENSNGAG00000001479) #34	Fastkd3 (ENSNGAG00000010644) #35	ENSNGAG00000021798 #36	ENSNGAG00000022210
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000153165.a.a.c.a	ENSGT00940000155274.a.b.c.b	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000155274.a.b.c.b	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775.d.a #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000153165.a.b.a.a.a.b.a.a.b	ENSGT00940000153165.a.b.a.a.a.b.a.a.a.b	ENSGT00940000155274.a.b.c.a.a.b	ENSGT00940000155274.a.b.c.a.b.d	ENSGT00940000154251.A	ENSGT00940000155274.a.b.c.a.b.c
Chinese hamster chok1gshd	MODERN SPECIES	1	Slc12a7 (ENSCGRG00001015337)	ENSCGRG00001012265	Slc6a19 (ENSCGRG00001011943)	Slc6a18 (ENSCGRG00001012926)	Tert (ENSCGRG00001012546) #7	Clptm1l (ENSCGRG00001016619) #8	Slc6a3 (ENSCGRG00001006359) #10	Lpcat1 (ENSCGRG00001005110)	Mrpl36 (ENSCGRG00001008138) #13	ENSCGRG00001016119 #14	Irx4 (ENSCGRG00001014881) #15	Irx2 (ENSCGRG00001014435) #16	ENSCGRG00001013677	Irx1 (ENSCGRG00001000951) #19	Adamts16 (ENSCGRG00001024673) #21	ENSCGRG00001024420 #22	ENSCGRG00001013263	MED10 (ENSCGRG00001014842) #23	Ube2ql1 (ENSCGRG00001007893) #25	Nsun2 (ENSCGRG00001003947) #26	Srd5a1 (ENSCGRG00001002045) #27	Tent4a (ENSCGRG00001014344) #28	Adcy2 (ENSCGRG00001012614) #32	Cfap90 (ENSCGRG00001012047) #34	Fastkd3 (ENSCGRG00001016248) #35	Mtrr (ENSCGRG00001015919) #36	ENSCGRG00001020262	ENSCGRG00001019143	ENSCGRG00001024688	ENSCGRG00001024555	ENSCGRG00001024303
Golden Hamster	MODERN SPECIES	619	Brd9 (ENSMAUG00000015050)	Trip13 (ENSMAUG00000018209)	Nkd2 (ENSMAUG00000011293)	Slc12a7 (ENSMAUG00000001535)	Slc6a19 (ENSMAUG00000021816)	Slc6a18 (ENSMAUG00000007818)	Tert (ENSMAUG00000008230) #7	Clptm1l (ENSMAUG00000011502) #8	Lpcat1 (ENSMAUG00000020192)	Ndufs6 (ENSMAUG00000011653) #14	Irx4 (ENSMAUG00000002904) #15	Irx2 (ENSMAUG00000014773) #16	ENSMAUG00000009392	Irx1 (ENSMAUG00000001495) #19	Adamts16 (ENSMAUG00000014925) #21	ENSMAUG00000008753 #22	ENSMAUG00000010296 #23	Ube2ql1 (ENSMAUG00000008423) #25	Nsun2 (ENSMAUG00000014207) #26	Srd5a1 (ENSMAUG00000020995) #27	Tent4a (ENSMAUG00000008017) #28	Adcy2 (ENSMAUG00000014023) #32	Cfap90 (ENSMAUG00000013591) #34	Fastkd3 (ENSMAUG00000016393) #35	Mtrr (ENSMAUG00000010077) #36	ENSMAUG00000014263	ENSMAUG00000019345	ENSMAUG00000016407	ENSMAUG00000016174	ENSMAUG00000016437	ENSMAUG00000014660
Cricetidae_B	ANCESTRAL SPECIES	37	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000153165.a.b.a.a.a.b.a.a.b	ENSGT00940000153165.a.b.a.a.a.b.a.a.a.b	ENSGT00940000155274.a.b.c.a.a.b	ENSGT00940000155274.a.b.c.b	ENSGT00940000158036 #37	ENSGT01100000263477.E
Prairie vole	MODERN SPECIES	6	Trip13 (ENSMOCG00000001629)	Nkd2 (ENSMOCG00000020604)	Slc12a7 (ENSMOCG00000005766)	Slc6a19 (ENSMOCG00000022361)	Slc6a18 (ENSMOCG00000014604)	Tert (ENSMOCG00000002105) #7	Clptm1l (ENSMOCG00000006930) #8	Slc6a3 (ENSMOCG00000000701) #10	Lpcat1 (ENSMOCG00000020107)	Mrpl36 (ENSMOCG00000004885) #13	Ndufs6 (ENSMOCG00000020730) #14	Irx4 (ENSMOCG00000003602) #15	Irx2 (ENSMOCG00000002016) #16	Irx1 (ENSMOCG00000001127) #19	Adamts16 (ENSMOCG00000006653) #21	ENSMOCG00000001781 #22	ENSMOCG00000016447	ENSMOCG00000012521 #23	ENSMOCG00000010244 #25	Nsun2 (ENSMOCG00000009613) #26	Srd5a1 (ENSMOCG00000013895) #27	Tent4a (ENSMOCG00000008477) #28	Adcy2 (ENSMOCG00000010329) #32	Cfap90 (ENSMOCG00000004801) #34	Fastkd3 (ENSMOCG00000018808) #35	Mtrr (ENSMOCG00000015617) #36	ENSMOCG00000021801	ENSMOCG00000019063	ENSMOCG00000016464	ENSMOCG00000000172	ENSMOCG00000020149
Northern American deer mouse	MODERN SPECIES	6	Trip13 (ENSPEMG00000006165)	Nkd2 (ENSPEMG00000009852)	Slc12a7 (ENSPEMG00000009080)	Slc6a19 (ENSPEMG00000016690)	Slc6a18 (ENSPEMG00000008103)	Tert (ENSPEMG00000013643) #7	Clptm1l (ENSPEMG00000007565) #8	Slc6a3 (ENSPEMG00000017495) #10	Lpcat1 (ENSPEMG00000015897)	Mrpl36 (ENSPEMG00000006495) #13	Ndufs6 (ENSPEMG00000012127) #14	Irx4 (ENSPEMG00000007372) #15	Irx2 (ENSPEMG00000000903) #16	Irx1 (ENSPEMG00000016721) #19	Adamts16 (ENSPEMG00000001407) #21	Ice1 (ENSPEMG00000029176) #22	ENSPEMG00000021408 #23	Ube2ql1 (ENSPEMG00000025343) #25	Nsun2 (ENSPEMG00000021790) #26	Srd5a1 (ENSPEMG00000021787) #27	Tent4a (ENSPEMG00000024121) #28	Adcy2 (ENSPEMG00000022387) #32	Cfap90 (ENSPEMG00000026544) #34	Fastkd3 (ENSPEMG00000021202) #35	Mtrr (ENSPEMG00000006807) #36	ENSPEMG00000011535	ENSPEMG00000022570	ENSPEMG00000025284	ENSPEMG00000020980	ENSPEMG00000027706	ENSPEMG00000020934
Murinae	ANCESTRAL SPECIES	39	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000153165.a.b.a.a.a.b.a.a.b	ENSGT00940000153165.a.b.a.a.a.b.a.a.a.b	ENSGT00940000155274.a.b.c.a.a.b	ENSGT00940000155274.a.b.c.a.b.a.b.a.a	ENSGT00940000155274.a.b.c.a.b.a.b.a.b	ENSGT00940000154251.A.h.a
Mus	ANCESTRAL SPECIES	22	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00860000135976	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00390000000378.d.b.p	ENSGT00940000153165.a.b.a.a.a.a.a.a	ENSGT00940000153165.a.b.a.a.a.a.a.b	ENSGT00940000154251.A.h.a.b	ENSGT00940000155274.a.b.c.a.b.a.b.a.b	ENSGT00940000155274.a.b.c.a.b.a.b.a.a
Mus_A	ANCESTRAL SPECIES	14	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896.b	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00860000135976	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00390000000378.d.b.p	ENSGT00940000153165.a.b.a.a.a.a.a.a.a	ENSGT00940000153165.a.b.a.a.a.a.a.b	ENSGT00940000153165.a.b.a.a.a.a.a.a.b	ENSGT00940000169481	ENSGT00940000154251.A.h.a.b
Mus_B	ANCESTRAL SPECIES	13	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896.b	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866.m #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00860000135976	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00390000000378.d.b.p	ENSGT00940000153165.a.b.a.a.a.a.a.a.a	ENSGT00940000153165.a.b.a.a.a.a.a.b	ENSGT00940000153165.a.b.a.a.a.a.a.a.b	ENSGT00940000169481	ENSGT00940000154251.A.h.a.b
Mouse	MODERN SPECIES	4	Trip13 (ENSMUSG00000021569)	Nkd2 (ENSMUSG00000021567)	Slc12a7 (ENSMUSG00000017756)	Slc6a19 (ENSMUSG00000021565)	Slc6a18 (ENSMUSG00000021612)	Tert (ENSMUSG00000021611) #7	Clptm1l (ENSMUSG00000021610) #8	Slc6a3 (ENSMUSG00000021609) #10	Lpcat1 (ENSMUSG00000021608)	Mrpl36 (ENSMUSG00000021607) #13	Ndufs6 (ENSMUSG00000021606) #14	Irx4 (ENSMUSG00000021604) #15	Irx2 (ENSMUSG00000001504) #16	Irx1 (ENSMUSG00000060969) #19	Adamts16 (ENSMUSG00000049538) #21	Ice1 (ENSMUSG00000034525) #22	Med10 (ENSMUSG00000021598)	Ube2ql1 (ENSMUSG00000052981) #25	Srd5a1 (ENSMUSG00000021594) #27	Nsun2 (ENSMUSG00000021595) #26	Tent4a (ENSMUSG00000034575) #28	Adcy2 (ENSMUSG00000021536) #32	Cfap90 (ENSMUSG00000021534) #34	Fastkd3 (ENSMUSG00000021532) #35	Mtrr (ENSMUSG00000034617) #36	BC048507 (ENSMUSG00000064063)	Gm10037 (ENSMUSG00000058246)	Zfp273 (ENSMUSG00000030446)	Zfp493 (ENSMUSG00000090659)	Zfp85 (ENSMUSG00000058331)	Zfp65 (ENSMUSG00000071281)
Mus_C	ANCESTRAL SPECIES	10	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896.b	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866.m #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00860000135976	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00390000000378.d.b.p	ENSGT00940000153165.a.b.a.a.a.a.a.a.a	ENSGT00940000153165.a.b.a.a.a.a.a.b	ENSGT00940000169481	ENSGT00940000154251.A.h.a.b	ENSGT00940000155274.a.b.c.a.b.a.b.a.b
Steppe mouse	MODERN SPECIES	3330	Slc12a7 (ENSMSIG00000016137)	ENSMSIG00000016283	Slc6a19 (ENSMSIG00000016300)	Slc6a18 (ENSMSIG00000016330)	Tert (ENSMSIG00000016999) #7	Clptm1l (ENSMSIG00000017023) #8	Slc6a3 (ENSMSIG00000017069) #10	Lpcat1 (ENSMSIG00000017129)	Mrpl36 (ENSMSIG00000017166) #13	Ndufs6 (ENSMSIG00000017174) #14	Irx4 (ENSMSIG00000017201) #15	Irx2 (ENSMSIG00000017231) #16	Irx1 (ENSMSIG00000017250) #19	ENSMSIG00000017283	Adamts16 (ENSMSIG00000017303) #21	Ice1 (ENSMSIG00000017478) #22	ENSMSIG00000017532	ENSMSIG00000017563 #23	ENSMSIG00000017620 #25	Nsun2 (ENSMSIG00000017636) #26	Srd5a1 (ENSMSIG00000017747) #27	ENSMSIG00000017762 #28	ENSMSIG00000017798
spretus	MODERN SPECIES	4	Nkd2 (MGP_SPRETEiJ_G0019593)	Slc12a7 (MGP_SPRETEiJ_G0019592)	Slc6a19 (MGP_SPRETEiJ_G0019591)	Slc6a18 (MGP_SPRETEiJ_G0019590)	Tert (MGP_SPRETEiJ_G0019589) #7	Clptm1l (MGP_SPRETEiJ_G0019588) #8	Slc6a3 (MGP_SPRETEiJ_G0019587) #10	Lpcat1 (MGP_SPRETEiJ_G0019586)	Mrpl36 (MGP_SPRETEiJ_G0019585) #13	Ndufs6 (MGP_SPRETEiJ_G0019584) #14	Irx4 (MGP_SPRETEiJ_G0019583) #15	Irx2 (MGP_SPRETEiJ_G0019582) #16	Irx1 (MGP_SPRETEiJ_G0019581) #19	MGP_SPRETEiJ_G0019580	Adamts16 (MGP_SPRETEiJ_G0019579) #21	Ice1 (MGP_SPRETEiJ_G0019578) #22	MGP_SPRETEiJ_G0019577 #23	MGP_SPRETEiJ_G0019576 #25	Srd5a1 (MGP_SPRETEiJ_G0019575) #27	Nsun2 (MGP_SPRETEiJ_G0019574) #26	Tent4a (MGP_SPRETEiJ_G0019573) #28	Adcy2 (MGP_SPRETEiJ_G0019572) #32	Cfap90 (MGP_SPRETEiJ_G0019571) #34	Fastkd3 (MGP_SPRETEiJ_G0019570) #35	Mtrr (MGP_SPRETEiJ_G0019569) #36	BC048507 (MGP_SPRETEiJ_G0019568)	MGP_SPRETEiJ_G0019567	Zfp493 (MGP_SPRETEiJ_G0019566)	MGP_SPRETEiJ_G0019565	Zfp65 (MGP_SPRETEiJ_G0019564)	MGP_SPRETEiJ_G0019563
Ryukyu mouse	MODERN SPECIES	4	Nkd2 (MGP_CAROLIEiJ_G0018709)	Slc12a7 (MGP_CAROLIEiJ_G0018708)	Slc6a19 (MGP_CAROLIEiJ_G0018707)	Slc6a18 (MGP_CAROLIEiJ_G0018706)	Tert (MGP_CAROLIEiJ_G0018705) #7	Clptm1l (MGP_CAROLIEiJ_G0018704) #8	Slc6a3 (MGP_CAROLIEiJ_G0018703) #10	Lpcat1 (MGP_CAROLIEiJ_G0018702)	Mrpl36 (MGP_CAROLIEiJ_G0018701) #13	Ndufs6 (MGP_CAROLIEiJ_G0018700) #14	Irx4 (MGP_CAROLIEiJ_G0018699) #15	Irx2 (MGP_CAROLIEiJ_G0018698) #16	Irx1 (MGP_CAROLIEiJ_G0018697) #19	MGP_CAROLIEiJ_G0018696	Adamts16 (MGP_CAROLIEiJ_G0018695) #21	Ice1 (MGP_CAROLIEiJ_G0018694) #22	MGP_CAROLIEiJ_G0018693 #23	Ube2ql1 (MGP_CAROLIEiJ_G0018692) #25	Srd5a1 (MGP_CAROLIEiJ_G0018691) #27	Nsun2 (MGP_CAROLIEiJ_G0018690) #26	Tent4a (MGP_CAROLIEiJ_G0018689) #28	Adcy2 (MGP_CAROLIEiJ_G0018688) #32	Cfap90 (MGP_CAROLIEiJ_G0018687) #34	Fastkd3 (MGP_CAROLIEiJ_G0018686) #35	Mtrr (MGP_CAROLIEiJ_G0018685) #36	BC048507 (MGP_CAROLIEiJ_G0018684)	Zfp493 (MGP_CAROLIEiJ_G0018683)	Zfp85 (MGP_CAROLIEiJ_G0018682)	MGP_CAROLIEiJ_G0018681	MGP_CAROLIEiJ_G0018680	Zfp729a (MGP_CAROLIEiJ_G0018679)
Shrew mouse	MODERN SPECIES	2	Nkd2 (MGP_PahariEiJ_G0015790)	Slc12a7 (MGP_PahariEiJ_G0015789)	Slc6a19 (MGP_PahariEiJ_G0015788)	Slc6a18 (MGP_PahariEiJ_G0015787)	Tert (MGP_PahariEiJ_G0015786) #7	Clptm1l (MGP_PahariEiJ_G0015785) #8	Slc6a3 (MGP_PahariEiJ_G0015784) #10	Lpcat1 (MGP_PahariEiJ_G0015783)	Mrpl36 (MGP_PahariEiJ_G0015782) #13	Ndufs6 (MGP_PahariEiJ_G0015781) #14	Irx4 (MGP_PahariEiJ_G0015780) #15	Irx2 (MGP_PahariEiJ_G0015779) #16	Irx1 (MGP_PahariEiJ_G0015778) #19	MGP_PahariEiJ_G0015777	Adamts16 (MGP_PahariEiJ_G0015776) #21	Ice1 (MGP_PahariEiJ_G0015775) #22	MGP_PahariEiJ_G0015774 #23	Ube2ql1 (MGP_PahariEiJ_G0015773) #25	Srd5a1 (MGP_PahariEiJ_G0015772) #27	Nsun2 (MGP_PahariEiJ_G0015771) #26	Tent4a (MGP_PahariEiJ_G0015770) #28	Adcy2 (MGP_PahariEiJ_G0015769) #32	Cfap90 (MGP_PahariEiJ_G0015768) #34	Fastkd3 (MGP_PahariEiJ_G0015767) #35	Mtrr (MGP_PahariEiJ_G0015766) #36	BC048507 (MGP_PahariEiJ_G0015765)	MGP_PahariEiJ_G0015764	MGP_PahariEiJ_G0015763	Zfp493 (MGP_PahariEiJ_G0015762)	MGP_PahariEiJ_G0015761	Zfp729a (MGP_PahariEiJ_G0015760)
Rat	MODERN SPECIES		Trip13 (ENSRNOG00000015810)	Nkd2 (ENSRNOG00000016103)	Slc12a7 (ENSRNOG00000016372)	Slc6a19 (ENSRNOG00000026501)	Slc6a18 (ENSRNOG00000016253)	Tert (ENSRNOG00000025327) #7	Clptm1l (ENSRNOG00000016923) #8	Slc6a3 (ENSRNOG00000017302) #10	Lpcat1 (ENSRNOG00000017930)	Mrpl36 (ENSRNOG00000023407) #13	Ndufs6l1 (ENSRNOG00000062531) #14	Irx4 (ENSRNOG00000012720) #15	Irx2 (ENSRNOG00000012742) #16	Irx1 (ENSRNOG00000033609) #19	Adamts16 (ENSRNOG00000016812) #21	Ice1 (ENSRNOG00000023053) #22	Dlat-ps1 (ENSRNOG00000017095)	Med10 (ENSRNOG00000017150) #23	Ube2ql1 (ENSRNOG00000034075) #25	Nsun2 (ENSRNOG00000017254) #26	Srd5a1 (ENSRNOG00000017601) #27	Tent4a (ENSRNOG00000017613) #28	Ap2b1-ps1 (ENSRNOG00000017678)	Adcy2 (ENSRNOG00000032150) #32	Cfap90 (ENSRNOG00000047406) #34	Fastkd3 (ENSRNOG00000027422) #35	Mtrr (ENSRNOG00000017826) #36	Zfp455l1 (ENSRNOG00000042308)	ENSRNOG00000068953	RGD1566325 (ENSRNOG00000017963)	LOC102547287 (ENSRNOG00000016462)
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00960000191710	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Hystricomorpha	ANCESTRAL SPECIES	31	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00960000191710	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Naked mole-rat female	MODERN SPECIES	7	ENSHGLG00000039877	PIK3R1 (ENSHGLG00000003228)	ENSHGLG00000009915	ENSHGLG00000002541	ENSHGLG00000002279	ENSHGLG00000036757	ENSHGLG00000047986	ENSHGLG00000004377	ENSHGLG00000000292	ENSHGLG00000000046	ENSHGLG00000035273	ENSHGLG00000048969	ENSHGLG00000003987 #16	IRX1 (ENSHGLG00000005060) #19	ADAMTS16 (ENSHGLG00000007184) #21	ICE1 (ENSHGLG00000004659) #22	ENSHGLG00000043670	ENSHGLG00000040324 #23	UBE2QL1 (ENSHGLG00000042708) #25	NSUN2 (ENSHGLG00000013825) #26	ENSHGLG00000018170 #27	TENT4A (ENSHGLG00000033481) #28	ENSHGLG00000016066	ENSHGLG00000040620	ADCY2 (ENSHGLG00000007112) #32	CFAP90 (ENSHGLG00000045658) #34	FASTKD3 (ENSHGLG00000004249) #35	MTRR (ENSHGLG00000005425) #36	SEMA5A (ENSHGLG00000017629) #37	ENSHGLG00000045152	ENSHGLG00000049198
Hystricomorpha_a	ANCESTRAL SPECIES	29	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Guinea pig	MODERN SPECIES	144															ADAMTS16 (ENSCPOG00000009819) #21	ENSCPOG00000039980 #22	MED10 (ENSCPOG00000031737) #23	UBE2QL1 (ENSCPOG00000038178) #25	NSUN2 (ENSCPOG00000008196) #26	SRD5A1 (ENSCPOG00000032112) #27	TENT4A (ENSCPOG00000009006) #28
Hystricomorpha_b	ANCESTRAL SPECIES	60	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b	ENSGT00390000012731.a.a
Long-tailed chinchilla	MODERN SPECIES	211	BRD9 (ENSCLAG00000005681)	TRIP13 (ENSCLAG00000003450)	NKD2 (ENSCLAG00000003738)	SLC12A7 (ENSCLAG00000004556)	SLC6A19 (ENSCLAG00000005488)	SLC6A18 (ENSCLAG00000004695)	TERT (ENSCLAG00000006143) #7	CLPTM1L (ENSCLAG00000006371) #8	SLC6A3 (ENSCLAG00000006703) #10	LPCAT1 (ENSCLAG00000007581)	NDUFS6 (ENSCLAG00000007890) #14	IRX4 (ENSCLAG00000013236) #15	IRX2 (ENSCLAG00000010848) #16	IRX1 (ENSCLAG00000011133) #19	ADAMTS16 (ENSCLAG00000011357) #21	ICE1 (ENSCLAG00000006995) #22	MED10 (ENSCLAG00000003135) #23	NSUN2 (ENSCLAG00000003188) #26	SRD5A1 (ENSCLAG00000003581) #27	TENT4A (ENSCLAG00000003733) #28	ADCY2 (ENSCLAG00000004022) #32	CFAP90 (ENSCLAG00000005513) #34	FASTKD3 (ENSCLAG00000005534) #35	MTRR (ENSCLAG00000003599) #36	SEMA5A (ENSCLAG00000003796) #37
Degu	MODERN SPECIES	49	TRIP13 (ENSODEG00000018401)	NKD2 (ENSODEG00000018297)	SLC12A7 (ENSODEG00000018252)	SLC6A19 (ENSODEG00000018254)	SLC6A18 (ENSODEG00000018351)	TERT (ENSODEG00000018274) #7	CLPTM1L (ENSODEG00000018435) #8	SLC6A3 (ENSODEG00000018337) #10	LPCAT1 (ENSODEG00000018339)	ENSODEG00000018308 #13	NDUFS6 (ENSODEG00000018267) #14	IRX4 (ENSODEG00000018434) #15	IRX2 (ENSODEG00000018250) #16	IRX1 (ENSODEG00000018349) #19	ADAMTS16 (ENSODEG00000018405) #21	ENSODEG00000018278 #22	ENSODEG00000018433	MED10 (ENSODEG00000018285) #23	UBE2QL1 (ENSODEG00000018284) #25	ENSODEG00000018291	NSUN2 (ENSODEG00000018305) #26	SRD5A1 (ENSODEG00000018442) #27	TENT4A (ENSODEG00000018357) #28	ENSODEG00000018283	ADCY2 (ENSODEG00000018279) #32	FASTKD3 (ENSODEG00000018378) #35	ENSODEG00000018330 #36	SEMA5A (ENSODEG00000018380) #37	ENSODEG00000018296	ATPSCKMT (ENSODEG00000018372)	ENSODEG00000018260
Sciuridae	ANCESTRAL SPECIES	32	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Marmotini	ANCESTRAL SPECIES	75	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Marmotini_b	ANCESTRAL SPECIES	157													ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Arctic ground squirrel	MODERN SPECIES	255												IRX2 (ENSUPAG00010016403) #16	IRX1 (ENSUPAG00010016392) #19	ENSUPAG00010016375	ADAMTS16 (ENSUPAG00010016298) #21	ICE1 (ENSUPAG00010016270) #22
Squirrel	MODERN SPECIES	234													IRX2 (ENSSTOG00000003533) #16	IRX1 (ENSSTOG00000020840) #19	ADAMTS16 (ENSSTOG00000004197) #21	ICE1 (ENSSTOG00000028724) #22	NSUN2 (ENSSTOG00000004090) #26	TENT4A (ENSSTOG00000004554) #28
Alpin marmot	MODERN SPECIES	27	TRIP13 (ENSMMMG00000016193)	NKD2 (ENSMMMG00000016197)	SLC12A7 (ENSMMMG00000016228)	SLC6A19 (ENSMMMG00000016250)	SLC6A18 (ENSMMMG00000016257)	TERT (ENSMMMG00000016292) #7	CLPTM1L (ENSMMMG00000016350) #8	SLC6A3 (ENSMMMG00000016359) #10	LPCAT1 (ENSMMMG00000016379)	ENSMMMG00000016387 #13	NDUFS6 (ENSMMMG00000016391) #14	IRX4 (ENSMMMG00000016398) #15	IRX2 (ENSMMMG00000016418) #16	IRX1 (ENSMMMG00000016428) #19	ADAMTS16 (ENSMMMG00000016445) #21	ICE1 (ENSMMMG00000016467) #22	MED10 (ENSMMMG00000016704) #23	UBE2QL1 (ENSMMMG00000016713) #25	NSUN2 (ENSMMMG00000016722) #26	ENSMMMG00000016735 #27	TENT4A (ENSMMMG00000016743) #28	ADCY2 (ENSMMMG00000016776) #32	CFAP90 (ENSMMMG00000016801) #34	FASTKD3 (ENSMMMG00000016807) #35	MTRR (ENSMMMG00000016810) #36	ENSMMMG00000016828	SEMA5A (ENSMMMG00000016842) #37	TAS2R1 (ENSMMMG00000016854)	ATPSCKMT (ENSMMMG00000016857)	CCT5 (ENSMMMG00000016876)	CMBL (ENSMMMG00000016882)
Eurasian red squirrel	MODERN SPECIES	15	SLC12A7 (ENSSVLG00005007858)	SLC6A19 (ENSSVLG00005007759)	SLC6A18 (ENSSVLG00005007675)	TERT (ENSSVLG00005007516) #7	CLPTM1L (ENSSVLG00005007406) #8	SLC6A3 (ENSSVLG00005007330) #10	ENSSVLG00005007261	ENSSVLG00005007224 #13	NDUFS6 (ENSSVLG00005007209) #14	IRX4 (ENSSVLG00005007188) #15	IRX2 (ENSSVLG00005007175) #16	ENSSVLG00005007165	IRX1 (ENSSVLG00005007138) #19	ENSSVLG00005007115	ADAMTS16 (ENSSVLG00005006885) #21	ICE1 (ENSSVLG00005006497) #22	MED10 (ENSSVLG00005006416) #23	UBE2QL1 (ENSSVLG00005006397) #25	NSUN2 (ENSSVLG00005006203) #26	SRD5A1 (ENSSVLG00005006147) #27	TENT4A (ENSSVLG00005006070) #28	ADCY2 (ENSSVLG00005006016) #32	CFAP90 (ENSSVLG00005005976) #34	FASTKD3 (ENSSVLG00005005935) #35	MTRR (ENSSVLG00005005871) #36	SEMA5A (ENSSVLG00005005842) #37	TAS2R1 (ENSSVLG00005005821)	ENSSVLG00005005790	ATPSCKMT (ENSSVLG00005005707)	ENSSVLG00005005577	CMBL (ENSSVLG00005005537)
Lagomorpha	ANCESTRAL SPECIES	514															ENSGT00940000159433 #21	ENSGT00950000183199.b #22
Rabbit	MODERN SPECIES	601															ADAMTS16 (ENSOCUG00000009507) #21	ICE1 (ENSOCUG00000022005) #22
Pika	MODERN SPECIES	1946															ADAMTS16 (ENSOPRG00000013210) #21	ENSOPRG00000013244 #22
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00960000191710	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000183199.b #22
Common shrew	MODERN SPECIES	4466																ENSSARG00000004026 #22
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00960000191710	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00990000208225	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00990000208225	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.a
Carnivora	ANCESTRAL SPECIES	8	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00990000208225	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00950000183210.d.a.c.a.a.a	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Felidae	ANCESTRAL SPECIES	6	ENSGT00940000157657	ENSGT00940000154896.f	ENSGT00940000154896.e	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00990000208225	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00950000183210.d.a.c.a.a.a	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Panthera	ANCESTRAL SPECIES	6	ENSGT00940000157657	ENSGT00940000154896.f	ENSGT00940000154896.e	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00990000208225	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00950000183210.d.a.c.a.a.a	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Tiger	MODERN SPECIES	523															ADAMTS16 (ENSPTIG00000013544) #21	ICE1 (ENSPTIG00000013477) #22	MED10 (ENSPTIG00000013384) #23	NSUN2 (ENSPTIG00000013257) #26	SRD5A1 (ENSPTIG00000013232) #27	TENT4A (ENSPTIG00000013200) #28
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00940000157657	ENSGT00940000154896.f	ENSGT00940000154896.e	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00990000208225	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00950000183210.d.a.c.a.a.a	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
leopard	MODERN SPECIES	19				ENSPPRG00000011435	SLC6A18 (ENSPPRG00000011628)	TERT (ENSPPRG00000006427) #7	CLPTM1L (ENSPPRG00000016169) #8	SLC6A3 (ENSPPRG00000018924) #10	LPCAT1 (ENSPPRG00000021187)	NDUFS6 (ENSPPRG00000022405) #14	IRX4 (ENSPPRG00000024448) #15	IRX2 (ENSPPRG00000024401) #16	ENSPPRG00000024272	IRX1 (ENSPPRG00000024209) #19	ADAMTS16 (ENSPPRG00000023920) #21	ENSPPRG00000022666 #22	MED10 (ENSPPRG00000000589) #23	UBE2QL1 (ENSPPRG00000000629) #25	NSUN2 (ENSPPRG00000001946) #26	SRD5A1 (ENSPPRG00000002054) #27	TENT4A (ENSPPRG00000002409) #28	ADCY2 (ENSPPRG00000003380) #32	CFAP90 (ENSPPRG00000003784) #34	FASTKD3 (ENSPPRG00000004141) #35	MTRR (ENSPPRG00000004545) #36	SEMA5A (ENSPPRG00000005014) #37	TAS2R1 (ENSPPRG00000014981)	ATPSCKMT (ENSPPRG00000005698)	CCT5 (ENSPPRG00000006386)	CMBL (ENSPPRG00000006791)	MARCHF6 (ENSPPRG00000012698)
lion	MODERN SPECIES		NKD2 (ENSPLOG00000003335)	SLC12A7 (ENSPLOG00000003362)	SLC6A19 (ENSPLOG00000003408)	SLC6A18 (ENSPLOG00000003576)	TERT (ENSPLOG00000003847) #7	CLPTM1L (ENSPLOG00000003877) #8	SLC6A3 (ENSPLOG00000003913) #10	LPCAT1 (ENSPLOG00000003938)	ENSPLOG00000003949 #13	NDUFS6 (ENSPLOG00000003955) #14	IRX4 (ENSPLOG00000003963) #15	IRX2 (ENSPLOG00000003976) #16	ENSPLOG00000003986	IRX1 (ENSPLOG00000003994) #19	ADAMTS16 (ENSPLOG00000004010) #21	ICE1 (ENSPLOG00000004038) #22	MED10 (ENSPLOG00000004055) #23	UBE2QL1 (ENSPLOG00000004071) #25	NSUN2 (ENSPLOG00000004085) #26	SRD5A1 (ENSPLOG00000004092) #27	TENT4A (ENSPLOG00000004144) #28	ADCY2 (ENSPLOG00000004170) #32	CFAP90 (ENSPLOG00000004188) #34	FASTKD3 (ENSPLOG00000004196) #35	MTRR (ENSPLOG00000010289) #36	SEMA5A (ENSPLOG00000010322) #37	TAS2R1 (ENSPLOG00000010440)	ENSPLOG00000010455	ATPSCKMT (ENSPLOG00000010468)	CCT5 (ENSPLOG00000010569)	CMBL (ENSPLOG00000010689)
Cat	MODERN SPECIES		SLC12A7 (ENSFCAG00000009540)	SLC6A19 (ENSFCAG00000009541)	SLC6A18 (ENSFCAG00000009542)	TERT (ENSFCAG00000009543) #7	CLPTM1L (ENSFCAG00000009544) #8	SLC6A3 (ENSFCAG00000002581) #10	LPCAT1 (ENSFCAG00000000783)	ENSFCAG00000026326 #13	NDUFS6 (ENSFCAG00000033856) #14	IRX4 (ENSFCAG00000022359) #15	IRX2 (ENSFCAG00000040664) #16	ENSFCAG00000044678	IRX1 (ENSFCAG00000036923) #19	ENSFCAG00000025379	ADAMTS16 (ENSFCAG00000003777) #21	ICE1 (ENSFCAG00000027435) #22	ENSFCAG00000037684	UBE2QL1 (ENSFCAG00000038630) #25	NSUN2 (ENSFCAG00000015602) #26	SRD5A1 (ENSFCAG00000015601) #27	TENT4A (ENSFCAG00000003474) #28	ADCY2 (ENSFCAG00000015101) #32	CFAP90 (ENSFCAG00000019341) #34	FASTKD3 (ENSFCAG00000015104) #35	MTRR (ENSFCAG00000015105) #36	SEMA5A (ENSFCAG00000012608) #37	TAS2R1 (ENSFCAG00000012611)	ENSFCAG00000048844	ATPSCKMT (ENSFCAG00000027158)	CCT5 (ENSFCAG00000003129)	CMBL (ENSFCAG00000028005)
Caniformia	ANCESTRAL SPECIES	5	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00950000183210.d.a.c.a.a.a	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Canidae	ANCESTRAL SPECIES	62	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00390000013811.b.d	ENSGT00950000183199.b #22	ENSGT00950000186221	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Canis_lupus	ANCESTRAL SPECIES	49	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00390000013811.b.d	ENSGT00950000183199.b #22	ENSGT00950000186221	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00940000153052.c.b.a.a.a.a.b.j.b	ENSGT00390000014771.a	ENSGT00550000074988
Dog	MODERN SPECIES	27	NKD2 (ENSCAFG00845027016)	SLC12A7 (ENSCAFG00845026600)	SLC6A19 (ENSCAFG00845026397)	SLC6A18 (ENSCAFG00845026287)	TERT (ENSCAFG00845025817) #7	CLPTM1L (ENSCAFG00845025532) #8	SLC6A3 (ENSCAFG00845025384) #10	LPCAT1 (ENSCAFG00845025093)	MRPL36 (ENSCAFG00845025034) #13	ENSCAFG00845024996 #14	IRX4 (ENSCAFG00845024941) #15	IRX2 (ENSCAFG00845024864) #16	IRX1 (ENSCAFG00845024655) #19	ADAMTS16 (ENSCAFG00845024365) #21	ENSCAFG00845024318	ICE1 (ENSCAFG00845024182) #22	ENSCAFG00845024145	MED10 (ENSCAFG00845024101) #23	UBE2QL1 (ENSCAFG00845024067) #25	NSUN2 (ENSCAFG00845023886) #26	SRD5A1 (ENSCAFG00845023819) #27	TENT4A (ENSCAFG00845023557) #28	ADCY2 (ENSCAFG00845023075) #32	CFAP90 (ENSCAFG00845022890) #34	FASTKD3 (ENSCAFG00845022802) #35	MTRR (ENSCAFG00845022722) #36	SEMA5A (ENSCAFG00845022219) #37	TAS2R1 (ENSCAFG00845022145)	ENSCAFG00845022120	ATPSCKMT (ENSCAFG00845021964)	CCT5 (ENSCAFG00845021786)
Dingo	MODERN SPECIES	159	NKD2 (ENSCAFG00020023031)	SLC12A7 (ENSCAFG00020023026)	SLC6A19 (ENSCAFG00020023014)	SLC6A18 (ENSCAFG00020022926)	TERT (ENSCAFG00020022919) #7	CLPTM1L (ENSCAFG00020022917) #8	SLC6A3 (ENSCAFG00020022906) #10	LPCAT1 (ENSCAFG00020022903)	MRPL36 (ENSCAFG00020022901) #13	NDUFS6 (ENSCAFG00020022900) #14	IRX4 (ENSCAFG00020022896) #15	IRX2 (ENSCAFG00020022893) #16	IRX1 (ENSCAFG00020022891) #19	ADAMTS16 (ENSCAFG00020022881) #21	ENSCAFG00020022878	ENSCAFG00020022877 #22	ENSCAFG00020022874	MED10 (ENSCAFG00020022869) #23	UBE2QL1 (ENSCAFG00020022868) #25	NSUN2 (ENSCAFG00020022862) #26	SRD5A1 (ENSCAFG00020022843) #27	TENT4A (ENSCAFG00020022835) #28	ENSCAFG00020022831	ADCY2 (ENSCAFG00020022544) #32	CFAP90 (ENSCAFG00020022543) #34	FASTKD3 (ENSCAFG00020022541) #35	MTRR (ENSCAFG00020022525) #36	SEMA5A (ENSCAFG00020022499) #37	TAS2R1 (ENSCAFG00020022493)	ENSCAFG00020022491	ATPSCKMT (ENSCAFG00020022486)
Red fox	MODERN SPECIES	138																ICE1 (ENSVVUG00000017667) #22	ENSVVUG00000017674	MED10 (ENSVVUG00000017687) #23	UBE2QL1 (ENSVVUG00000017689) #25	NSUN2 (ENSVVUG00000017691) #26	SRD5A1 (ENSVVUG00000017694) #27	TENT4A (ENSVVUG00000017702) #28	ADCY2 (ENSVVUG00000017710) #32	CFAP90 (ENSVVUG00000017732) #34	FASTKD3 (ENSVVUG00000017734) #35	MTRR (ENSVVUG00000017737) #36	ENSVVUG00000017745	SEMA5A (ENSVVUG00000017753) #37	TAS2R1 (ENSVVUG00000017784)	ENSVVUG00000017786	ATPSCKMT (ENSVVUG00000017833)
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00950000183210.d.a.c.a.a.a	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Mustelinae	ANCESTRAL SPECIES	127	ENSGT00940000161608	ENSGT00950000183170.b.a	ENSGT00390000017432	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36
American mink	MODERN SPECIES	131	TRIP13 (ENSNVIG00000022459)	ENSNVIG00000022473	SLC12A7 (ENSNVIG00000022621)	SLC6A19 (ENSNVIG00000024286)	SLC6A18 (ENSNVIG00000024290)	TERT (ENSNVIG00000024328) #7	CLPTM1L (ENSNVIG00000024366) #8	SLC6A3 (ENSNVIG00000024373) #10	LPCAT1 (ENSNVIG00000024375)	NDUFS6 (ENSNVIG00000024379) #14	IRX4 (ENSNVIG00000024384) #15	IRX2 (ENSNVIG00000000014) #16	ENSNVIG00000000020	IRX1 (ENSNVIG00000000063) #19	ADAMTS16 (ENSNVIG00000000104) #21	ICE1 (ENSNVIG00000000134) #22	MED10 (ENSNVIG00000000179) #23
Ferret	MODERN SPECIES	296	TERT (ENSMPUG00000008917) #7	CLPTM1L (ENSMPUG00000008908) #8	ENSMPUG00000008903	SLC6A3 (ENSMPUG00000007672) #10	LPCAT1 (ENSMPUG00000007662)	ENSMPUG00000019810	IRX4 (ENSMPUG00000007656) #15	IRX2 (ENSMPUG00000007647) #16	ENSMPUG00000007644	IRX1 (ENSMPUG00000007638) #19	ENSMPUG00000007631	ENSMPUG00000007624	ENSMPUG00000007621	ENSMPUG00000007616	ADAMTS16 (ENSMPUG00000007606) #21	ICE1 (ENSMPUG00000007595) #22	ENSMPUG00000007591	ENSMPUG00000007586	ENSMPUG00000007583	MED10 (ENSMPUG00000007576) #23	ENSMPUG00000019809	NSUN2 (ENSMPUG00000007561) #26	SRD5A1 (ENSMPUG00000007540) #27	TENT4A (ENSMPUG00000007530) #28	ENSMPUG00000019807	ADCY2 (ENSMPUG00000007159) #32	FASTKD3 (ENSMPUG00000007141) #35	ENSMPUG00000007134
Ursidae	ANCESTRAL SPECIES	24	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00940000166335	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00950000183210.d.a.c.a.a.a	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Giant Panda	MODERN SPECIES	13	ENSAMEG00000008326	ENSAMEG00000029733	BRD9 (ENSAMEG00000008289)	ENSAMEG00000008267	ENSAMEG00000010356	SLC6A18 (ENSAMEG00000010403)	TERT (ENSAMEG00000010578) #7	CLPTM1L (ENSAMEG00000010640) #8	SLC6A3 (ENSAMEG00000010690) #10	LPCAT1 (ENSAMEG00000010885)	NDUFS6 (ENSAMEG00000010930) #14	IRX4 (ENSAMEG00000010933) #15	IRX2 (ENSAMEG00000030165) #16	IRX1 (ENSAMEG00000001629) #19	ENSAMEG00000005402 #21	ICE1 (ENSAMEG00000005383) #22	NSUN2 (ENSAMEG00000002744) #26	SRD5A1 (ENSAMEG00000002796) #27	TENT4A (ENSAMEG00000002806) #28	ENSAMEG00000013734	ADCY2 (ENSAMEG00000028284) #32	FASTKD3 (ENSAMEG00000000793) #35	MTRR (ENSAMEG00000000762) #36	SEMA5A (ENSAMEG00000003884) #37	TAS2R1 (ENSAMEG00000003883)	ENSAMEG00000003878	ATPSCKMT (ENSAMEG00000003866)	CCT5 (ENSAMEG00000003838)	CMBL (ENSAMEG00000003820)	MARCHF6 (ENSAMEG00000003768)	ROPN1L (ENSAMEG00000003758)
Ursus	ANCESTRAL SPECIES	114	ENSGT00940000153875.c	ENSGT00940000161608	ENSGT00950000183170.b.a	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00940000166335	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Polar bear	MODERN SPECIES	324	CEP72 (ENSUMAG00000022135)	TPPP (ENSUMAG00000022129)	ENSUMAG00000022124	BRD9 (ENSUMAG00000022112)	TRIP13 (ENSUMAG00000022041)	ENSUMAG00000022013	SLC12A7 (ENSUMAG00000021868)	SLC6A19 (ENSUMAG00000021799)	SLC6A18 (ENSUMAG00000021793)	CLPTM1L (ENSUMAG00000021602) #8	SLC6A3 (ENSUMAG00000021572) #10	LPCAT1 (ENSUMAG00000021535)	ENSUMAG00000021510 #13	ENSUMAG00000021508 #14	ADAMTS16 (ENSUMAG00000021427) #21	ICE1 (ENSUMAG00000021400) #22	ENSUMAG00000021395	NSUN2 (ENSUMAG00000021149) #26	SRD5A1 (ENSUMAG00000021097) #27	TENT4A (ENSUMAG00000021088) #28	ADCY2 (ENSUMAG00000020819) #32
American black bear	DUPLICATION
American black bear	MODERN SPECIES	2798																ENSUAMG00000008419 #22
American black bear	MODERN SPECIES	1283															ADAMTS16 (ENSUAMG00000023549) #21	ENSUAMG00000023553 #22
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Equus	ANCESTRAL SPECIES	23	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT01090000260115	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000155163.a.a	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988
Donkey	MODERN SPECIES	1	TRIP13 (ENSEASG00005018251)	NKD2 (ENSEASG00005018295)	SLC12A7 (ENSEASG00005018301)	SLC6A19 (ENSEASG00005018308)	SLC6A18 (ENSEASG00005018374)	TERT (ENSEASG00005018543) #7	CLPTM1L (ENSEASG00005018545) #8	SLC6A3 (ENSEASG00005018547) #10	LPCAT1 (ENSEASG00005032107)	ENSEASG00005036706 #13	NDUFS6 (ENSEASG00005023604) #14	IRX4 (ENSEASG00005018554) #15	IRX2 (ENSEASG00005018557) #16	IRX1 (ENSEASG00005018560) #19	ADAMTS16 (ENSEASG00005018564) #21	ICE1 (ENSEASG00005018571) #22	ENSEASG00005018574	MED10 (ENSEASG00005018576) #23	UBE2QL1 (ENSEASG00005032765) #25	NSUN2 (ENSEASG00005018580) #26	ENSEASG00005018582	SRD5A1 (ENSEASG00005018581) #27	TENT4A (ENSEASG00005018583) #28	ADCY2 (ENSEASG00005018584) #32	CFAP90 (ENSEASG00005024888) #34	FASTKD3 (ENSEASG00005018587) #35	MTRR (ENSEASG00005018589) #36	ENSEASG00005026990	SEMA5A (ENSEASG00005018591) #37	TAS2R1 (ENSEASG00005018593)	ATPSCKMT (ENSEASG00005018594)
Horse	MODERN SPECIES	13	SLC12A7 (ENSECAG00000009911)	SLC6A19 (ENSECAG00000015357)	SLC6A18 (ENSECAG00000014930)	TERT (ENSECAG00000001347) #7	CLPTM1L (ENSECAG00000013231) #8	ENSECAG00000058649	SLC6A3 (ENSECAG00000024615) #10	LPCAT1 (ENSECAG00000021716)	MRPL36 (ENSECAG00000001222) #13	NDUFS6 (ENSECAG00000021690) #14	IRX4 (ENSECAG00000017403) #15	IRX2 (ENSECAG00000015758) #16	IRX1 (ENSECAG00000015273) #19	ENSECAG00000001110	ADAMTS16 (ENSECAG00000000787) #21	ICE1 (ENSECAG00000023968) #22	MED10 (ENSECAG00000023738)	ENSECAG00000035561 #25	NSUN2 (ENSECAG00000016357) #26	ENSECAG00000045164	SRD5A1 (ENSECAG00000012520) #27	TENT4A (ENSECAG00000010134) #28	ADCY2 (ENSECAG00000016266) #32	CFAP90 (ENSECAG00000015640) #34	FASTKD3 (ENSECAG00000014894) #35	MTRR (ENSECAG00000023073) #36	ENSECAG00000048611	ENSECAG00000045308	SEMA5A (ENSECAG00000016241) #37	TAS2R1 (ENSECAG00000005160)	ATPSCKMT (ENSECAG00000013194)
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00390000002325	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Megabat	MODERN SPECIES	1891																ENSPVAG00000004215 #22
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00990000208225	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Microbat	MODERN SPECIES	937	TRIP13 (ENSMLUG00000004237)	NKD2 (ENSMLUG00000004247)	SLC12A7 (ENSMLUG00000004253)	SLC6A19 (ENSMLUG00000012517)	SLC6A18 (ENSMLUG00000012527)	TERT (ENSMLUG00000012533) #7	CLPTM1L (ENSMLUG00000012546) #8	SLC6A3 (ENSMLUG00000015691) #10	LPCAT1 (ENSMLUG00000015702)	NDUFS6 (ENSMLUG00000016888) #14	ENSMLUG00000007563 #15	IRX2 (ENSMLUG00000002364) #16	ENSMLUG00000030572	ENSMLUG00000028897	ADAMTS16 (ENSMLUG00000016787) #21	ICE1 (ENSMLUG00000016799) #22	ENSMLUG00000007960 #23	UBE2QL1 (ENSMLUG00000029107) #25	NSUN2 (ENSMLUG00000009609) #26	SRD5A1 (ENSMLUG00000009652) #27	TENT4A (ENSMLUG00000004424) #28	ENSMLUG00000029028	ADCY2 (ENSMLUG00000013498) #32	CFAP90 (ENSMLUG00000017359) #34	FASTKD3 (ENSMLUG00000013518) #35	MTRR (ENSMLUG00000010391) #36	GOLPH3 (ENSMLUG00000007410)	PDZD2 (ENSMLUG00000007331)	C5orf22 (ENSMLUG00000002598)	DROSHA (ENSMLUG00000002581)	CDH6 (ENSMLUG00000002574)
Greater horseshoe bat	MODERN SPECIES	25	SLC6A19 (ENSRFEG00010001577)	SLC6A18 (ENSRFEG00010001792)	TERT (ENSRFEG00010002119) #7	CLPTM1L (ENSRFEG00010002171) #8	SLC6A3 (ENSRFEG00010002207) #10	LPCAT1 (ENSRFEG00010002236)	MRPL36 (ENSRFEG00010002262) #13	NDUFS6 (ENSRFEG00010002276) #14	IRX4 (ENSRFEG00010002288) #15	IRX2 (ENSRFEG00010002308) #16	ENSRFEG00010002333	ENSRFEG00010002345	ENSRFEG00010002361	IRX1 (ENSRFEG00010002369) #19	ADAMTS16 (ENSRFEG00010002424) #21	ICE1 (ENSRFEG00010002508) #22	MED10 (ENSRFEG00010002529) #23	UBE2QL1 (ENSRFEG00010002542) #25	NSUN2 (ENSRFEG00010002690) #26	SRD5A1 (ENSRFEG00010002875) #27	TENT4A (ENSRFEG00010002900) #28	ADCY2 (ENSRFEG00010002967) #32	CFAP90 (ENSRFEG00010003003) #34	FASTKD3 (ENSRFEG00010003029) #35	MTRR (ENSRFEG00010003071) #36	SEMA5A (ENSRFEG00010003116) #37	TAS2R1 (ENSRFEG00010003156)	ATPSCKMT (ENSRFEG00010003174)	CCT5 (ENSRFEG00010003237)	CMBL (ENSRFEG00010003311)	MARCHF6 (ENSRFEG00010003360)
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00960000191710	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00990000208225	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Suina	ANCESTRAL SPECIES	25	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00960000191710	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Chacoan peccary	MODERN SPECIES	7												IRX4 (ENSCWAG00000000416) #15	IRX2 (ENSCWAG00000000397) #16	IRX1 (ENSCWAG00000000355) #19	ADAMTS16 (ENSCWAG00000000282) #21	ICE1 (ENSCWAG00000000224) #22	MED10 (ENSCWAG00000005876) #23	UBE2QL1 (ENSCWAG00000005858) #25	NSUN2 (ENSCWAG00000005818) #26	SRD5A1 (ENSCWAG00000005799) #27	TENT4A (ENSCWAG00000005723) #28	ADCY2 (ENSCWAG00000005614) #32	CFAP90 (ENSCWAG00000005585) #34	FASTKD3 (ENSCWAG00000005559) #35	MTRR (ENSCWAG00000005530) #36	SEMA5A (ENSCWAG00000005493) #37	TAS2R1 (ENSCWAG00000005462)	ATPSCKMT (ENSCWAG00000005400)	CCT5 (ENSCWAG00000005226)	CMBL (ENSCWAG00000005191)	MARCHF6 (ENSCWAG00000005026)
Pig	MODERN SPECIES	7	TRIP13 (ENSSSCG00000034522)	NKD2 (ENSSSCG00000055161)	SLC12A7 (ENSSSCG00000034302)	SLC6A19 (ENSSSCG00000017120)	SLC6A18 (ENSSSCG00000017117)	TERT (ENSSSCG00000017118) #7	CLPTM1L (ENSSSCG00000017119) #8	SLC6A3 (ENSSSCG00000017121) #10	LPCAT1 (ENSSSCG00000017116)	MRPL36 (ENSSSCG00000040154) #13	NDUFS6 (ENSSSCG00000017114) #14	IRX4 (ENSSSCG00000017112) #15	IRX2 (ENSSSCG00000032074) #16	IRX1 (ENSSSCG00000034884) #19	ADAMTS16 (ENSSSCG00000017109) #21	ICE1 (ENSSSCG00000031547) #22	MED10 (ENSSSCG00000017106) #23	UBE2QL1 (ENSSSCG00000035825) #25	NSUN2 (ENSSSCG00000017104) #26	SRD5A1 (ENSSSCG00000017103) #27	TENT4A (ENSSSCG00000017102) #28	ADCY2 (ENSSSCG00000017101) #32	CFAP90 (ENSSSCG00000017098) #34	FASTKD3 (ENSSSCG00000017099) #35	MTRR (ENSSSCG00000017100) #36	ENSSSCG00000048414	SEMA5A (ENSSSCG00000017095) #37	TAS2R1 (ENSSSCG00000053250)	ATPSCKMT (ENSSSCG00000036387)	CCT5 (ENSSSCG00000024126)	CMBL (ENSSSCG00000039763)
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00990000208225	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Camelidae	ANCESTRAL SPECIES	1	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00990000208225	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b	ENSGT00390000012731.a.a
Arabian camel	MODERN SPECIES	22	TRIP13 (ENSCDRG00005013214)	NKD2 (ENSCDRG00005013068)	SLC12A7 (ENSCDRG00005007851)	SLC6A19 (ENSCDRG00005007586)	SLC6A18 (ENSCDRG00005007426)	TERT (ENSCDRG00005007091) #7	CLPTM1L (ENSCDRG00005006937) #8	SLC6A3 (ENSCDRG00005006584) #10	LPCAT1 (ENSCDRG00005006427)	MRPL36 (ENSCDRG00005006409) #13	NDUFS6 (ENSCDRG00005006367) #14	IRX4 (ENSCDRG00005005132) #15	IRX2 (ENSCDRG00005005106) #16	ENSCDRG00005005061	ENSCDRG00005004962 #21	ICE1 (ENSCDRG00005004943) #22	MED10 (ENSCDRG00005004916) #23	NSUN2 (ENSCDRG00005004622) #26	SRD5A1 (ENSCDRG00005004588) #27	TENT4A (ENSCDRG00005004536) #28	ADCY2 (ENSCDRG00005004299) #32	CFAP90 (ENSCDRG00005004257) #34	FASTKD3 (ENSCDRG00005004222) #35	MTRR (ENSCDRG00005004184) #36	ENSCDRG00005004152	SEMA5A (ENSCDRG00005003914) #37	TAS2R1 (ENSCDRG00005003868)	ATPSCKMT (ENSCDRG00005003839)	CCT5 (ENSCDRG00005003627)	CMBL (ENSCDRG00005003573)	MARCHF6 (ENSCDRG00005003229)
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00990000208225	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Cetacea	ANCESTRAL SPECIES	1	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00990000208225	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01030000235349	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00990000208225	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b	ENSGT00950000183198.c.b.a.t.a
Sperm whale	MODERN SPECIES	19	NKD2 (ENSPCTG00005001284)	SLC12A7 (ENSPCTG00005001313)	SLC6A19 (ENSPCTG00005001357)	TERT (ENSPCTG00005001408) #7	CLPTM1L (ENSPCTG00005001495) #8	SLC6A3 (ENSPCTG00005001531) #10	LPCAT1 (ENSPCTG00005001554)	MRPL36 (ENSPCTG00005001573) #13	NDUFS6 (ENSPCTG00005001580) #14	IRX4 (ENSPCTG00005001592) #15	IRX2 (ENSPCTG00005001610) #16	ENSPCTG00005001625	ENSPCTG00005001636 #16	IRX1 (ENSPCTG00005001645) #19	ADAMTS16 (ENSPCTG00005001733) #21	ICE1 (ENSPCTG00005002002) #22	ENSPCTG00005002020	MED10 (ENSPCTG00005002031) #23	ENSPCTG00005002052 #26	SRD5A1 (ENSPCTG00005002064) #27	TENT4A (ENSPCTG00005002085) #28	ADCY2 (ENSPCTG00005002147) #32	CFAP90 (ENSPCTG00005002289) #34	FASTKD3 (ENSPCTG00005002301) #35	MTRR (ENSPCTG00005002314) #36	SEMA5A (ENSPCTG00005002330) #37	ATPSCKMT (ENSPCTG00005002344)	CCT5 (ENSPCTG00005002365)	CMBL (ENSPCTG00005002401)	MARCH6 (ENSPCTG00005002477)	ENSPCTG00005002747
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00990000208225	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501.f #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b	ENSGT00390000012731.a.a
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00990000208225	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501.f #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b	ENSGT00390000012731.a.a
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00990000208225	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501.f #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b	ENSGT00390000012731.a.a
Narwhal	MODERN SPECIES	298	NKD2 (ENSMMNG00015005039)	SLC12A7 (ENSMMNG00015005066)	SLC6A19 (ENSMMNG00015005102)	SLC6A18 (ENSMMNG00015005126)	TERT (ENSMMNG00015005153) #7	CLPTM1L (ENSMMNG00015005167) #8	SLC6A3 (ENSMMNG00015005189) #10	LPCAT1 (ENSMMNG00015005202)	MRPL36 (ENSMMNG00015005219) #13	NDUFS6 (ENSMMNG00015005230) #14	IRX4 (ENSMMNG00015005245) #15	IRX2 (ENSMMNG00015005260) #16	ENSMMNG00015005274	IRX1 (ENSMMNG00015005292) #19	ADAMTS16 (ENSMMNG00015005325) #21	ICE1 (ENSMMNG00015005372) #22	ENSMMNG00015005394 #23	UBE2QL1 (ENSMMNG00015005409) #25	NSUN2 (ENSMMNG00015005419) #26	SRD5A1 (ENSMMNG00015005441) #27	TENT4A (ENSMMNG00015005453) #28	ADCY2 (ENSMMNG00015005481) #32	CFAP90 (ENSMMNG00015005524) #34	FASTKD3 (ENSMMNG00015005536) #35	MTRR (ENSMMNG00015005557) #36	ENSMMNG00015005590	ENSMMNG00015005605	SEMA5A (ENSMMNG00015005625) #37	ATPSCKMT (ENSMMNG00015005677)	CCT5 (ENSMMNG00015005728)	CMBL (ENSMMNG00015005779)
Beluga whale	MODERN SPECIES	16	TRIP13 (ENSDLEG00000003445)	NKD2 (ENSDLEG00000003494)	SLC12A7 (ENSDLEG00000003522)	SLC6A19 (ENSDLEG00000003586)	SLC6A18 (ENSDLEG00000003661)	TERT (ENSDLEG00000003731) #7	CLPTM1L (ENSDLEG00000003766) #8	SLC6A3 (ENSDLEG00000003787) #10	LPCAT1 (ENSDLEG00000003802)	ENSDLEG00000003825 #13	NDUFS6 (ENSDLEG00000003836) #14	IRX4 (ENSDLEG00000003849) #15	IRX2 (ENSDLEG00000003871) #16	IRX1 (ENSDLEG00000003895) #19	ADAMTS16 (ENSDLEG00000000178) #21	ICE1 (ENSDLEG00000000235) #22	MED10 (ENSDLEG00000000283) #23	UBE2QL1 (ENSDLEG00000000392) #25	NSUN2 (ENSDLEG00000000437) #26	SRD5A1 (ENSDLEG00000000513) #27	PAPD7 (ENSDLEG00000000536) #28	ADCY2 (ENSDLEG00000000578) #32	CUNH5orf49 (ENSDLEG00000000660) #34	FASTKD3 (ENSDLEG00000000670) #35	MTRR (ENSDLEG00000000694) #36	SEMA5A (ENSDLEG00000000752) #37	ATPSCKMT (ENSDLEG00000000926)	CCT5 (ENSDLEG00000000940)	CMBL (ENSDLEG00000000961)	MARCH6 (ENSDLEG00000000992)	ROPN1L (ENSDLEG00000001073)
Vaquita	MODERN SPECIES	14	SLC12A7 (ENSPSNG00000002551)	SLC6A19 (ENSPSNG00000002478)	SLC6A18 (ENSPSNG00000002444)	TERT (ENSPSNG00000002372) #7	CLPTM1L (ENSPSNG00000002275) #8	SLC6A3 (ENSPSNG00000002215) #10	LPCAT1 (ENSPSNG00000002146)	ENSPSNG00000002113 #13	NDUFS6 (ENSPSNG00000002096) #14	IRX4 (ENSPSNG00000002071) #15	IRX2 (ENSPSNG00000002053) #16	ENSPSNG00000002036	IRX1 (ENSPSNG00000002005) #19	ENSPSNG00000001985	ADAMTS16 (ENSPSNG00000001929) #21	ICE1 (ENSPSNG00000001876) #22	ENSPSNG00000001827 #23	UBE2QL1 (ENSPSNG00000001807) #25	NSUN2 (ENSPSNG00000001768) #26	SRD5A1 (ENSPSNG00000001754) #27	TENT4A (ENSPSNG00000001714) #28	ADCY2 (ENSPSNG00000001660) #32	CFAP90 (ENSPSNG00000001622) #34	FASTKD3 (ENSPSNG00000001602) #35	MTRR (ENSPSNG00000001565) #36	ENSPSNG00000001545	SEMA5A (ENSPSNG00000001504) #37	ATPSCKMT (ENSPSNG00000001462)	CCT5 (ENSPSNG00000001419)	CMBL (ENSPSNG00000001379)	MARCHF6 (ENSPSNG00000001274)
Dolphin	MODERN SPECIES	4748																ENSTTRG00000017079 #22
Blue whale	MODERN SPECIES	14	SLC12A7 (ENSBMSG00010012799)	SLC6A19 (ENSBMSG00010013817)	ENSBMSG00010013849	TERT (ENSBMSG00010013889) #7	CLPTM1L (ENSBMSG00010014019) #8	SLC6A3 (ENSBMSG00010014310) #10	LPCAT1 (ENSBMSG00010014400)	MRPL36 (ENSBMSG00010014493) #13	NDUFS6 (ENSBMSG00010014513) #14	ENSBMSG00010014531 #15	ENSBMSG00010014549 #15	IRX2 (ENSBMSG00010014578) #16	ENSBMSG00010014609	IRX1 (ENSBMSG00010014662) #19	ADAMTS16 (ENSBMSG00010014738) #21	ICE1 (ENSBMSG00010014997) #22	MED10 (ENSBMSG00010015064) #23	ENSBMSG00010015095 #25	NSUN2 (ENSBMSG00010015114) #26	SRD5A1 (ENSBMSG00010015152) #27	TENT4A (ENSBMSG00010015190) #28	ADCY2 (ENSBMSG00010015273) #32	CFAP90 (ENSBMSG00010015403) #34	FASTKD3 (ENSBMSG00010015428) #35	MTRR (ENSBMSG00010015453) #36	SEMA5A (ENSBMSG00010015493) #37	ENSBMSG00010015568	ATPSCKMT (ENSBMSG00010015593)	CCT5 (ENSBMSG00010015626)	CMBL (ENSBMSG00010015715)	MARCHF6 (ENSBMSG00010015821)
Pecora	ANCESTRAL SPECIES	25	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Yarkand deer	MODERN SPECIES	17	TRIP13 (ENSCHYG00000021703)	NKD2 (ENSCHYG00000021646)	SLC12A7 (ENSCHYG00000021056)	SLC6A19 (ENSCHYG00000020930)	SLC6A18 (ENSCHYG00000020702)	TERT (ENSCHYG00000020414) #7	ENSCHYG00000020359	CLPTM1L (ENSCHYG00000020066) #8	ENSCHYG00000019585 #10	LPCAT1 (ENSCHYG00000019379)	ENSCHYG00000019353 #13	ENSCHYG00000019290 #14	IRX4 (ENSCHYG00000019198) #15	IRX1 (ENSCHYG00000019067) #19	ADAMTS16 (ENSCHYG00000018678) #21	ICE1 (ENSCHYG00000018552) #22	ENSCHYG00000018521	ENSCHYG00000018501	MED10 (ENSCHYG00000018459) #23	UBE2QL1 (ENSCHYG00000018406) #25	NSUN2 (ENSCHYG00000018182) #26	SRD5A1 (ENSCHYG00000018150) #27	TENT4A (ENSCHYG00000018057) #28	ADCY2 (ENSCHYG00000017238) #32	ENSCHYG00000017205 #33	CFAP90 (ENSCHYG00000017169) #34	FASTKD3 (ENSCHYG00000017127) #35	MTRR (ENSCHYG00000016969) #36	SEMA5A (ENSCHYG00000016807) #37	TAS2R1 (ENSCHYG00000016763)	ENSCHYG00000016710
Percora_a	ANCESTRAL SPECIES	26	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Siberian musk deer	MODERN SPECIES	1233															ADAMTS16 (ENSMMSG00000019291) #21	ICE1 (ENSMMSG00000020525) #22	MED10 (ENSMMSG00000020585) #23	UBE2QL1 (ENSMMSG00000020605) #25	NSUN2 (ENSMMSG00000020641) #26	ENSMMSG00000020746 #27	TENT4A (ENSMMSG00000020780) #28	ADCY2 (ENSMMSG00000020881) #32	ENSMMSG00000021030 #33	CFAP90 (ENSMMSG00000021039) #34	FASTKD3 (ENSMMSG00000021063) #35	MTRR (ENSMMSG00000021088) #36	SEMA5A (ENSMMSG00000021177) #37	ENSMMSG00000021301	ENSMMSG00000021350	ATPSCKMT (ENSMMSG00000021397)	CCT5 (ENSMMSG00000021573)
Bovidae	ANCESTRAL SPECIES	26	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.d	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988
Caprinae	ANCESTRAL SPECIES	24	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.d	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Goat	MODERN SPECIES	12	TPPP (ENSCHIG00000012981)	SLC6A19 (ENSCHIG00000009247)	SLC6A18 (ENSCHIG00000017593)	TERT (ENSCHIG00000008229) #7	BRD9 (ENSCHIG00000015801)	TRIP13 (ENSCHIG00000022332)	NKD2 (ENSCHIG00000022698)	SLC12A7 (ENSCHIG00000018789)	SLC6A3 (ENSCHIG00000021410) #10	LPCAT1 (ENSCHIG00000008758)	NDUFS6 (ENSCHIG00000020281) #14	IRX4 (ENSCHIG00000023690) #15	IRX2 (ENSCHIG00000011251) #16	IRX1 (ENSCHIG00000017851) #19	ADAMTS16 (ENSCHIG00000010517) #21	ICE1 (ENSCHIG00000024007) #22	MED10 (ENSCHIG00000020899) #23	UBE2QL1 (ENSCHIG00000002861) #25	NSUN2 (ENSCHIG00000019385) #26	SRD5A1 (ENSCHIG00000012029) #27	TENT4A (ENSCHIG00000017328) #28	ENSCHIG00000025402	ADCY2 (ENSCHIG00000023502) #32	CFAP90 (ENSCHIG00000025918) #34	FASTKD3 (ENSCHIG00000018823) #35	MTRR (ENSCHIG00000019340) #36	ENSCHIG00000001904	SEMA5A (ENSCHIG00000013180) #37	ENSCHIG00000019011	ATPSCKMT (ENSCHIG00000018299)	CCT5 (ENSCHIG00000018198)
Rambouillet Sheep	MODERN SPECIES	7	BRD9 (ENSOARG00020013591)	TRIP13 (ENSOARG00020013528)	SLC12A7 (ENSOARG00020012793)	SLC6A19 (ENSOARG00020012724)	SLC6A18 (ENSOARG00020011151)	TERT (ENSOARG00020010728) #7	CLPTM1L (ENSOARG00020010550) #8	SLC6A3 (ENSOARG00020010397) #10	LPCAT1 (ENSOARG00020010211)	ENSOARG00020010180 #13	NDUFS6 (ENSOARG00020010127) #14	IRX4 (ENSOARG00020010022) #15	IRX2 (ENSOARG00020023975) #16	IRX1 (ENSOARG00020023933) #19	ADAMTS16 (ENSOARG00020023792) #21	ICE1 (ENSOARG00020023470) #22	MED10 (ENSOARG00020023421) #23	UBE2QL1 (ENSOARG00020023404) #25	NSUN2 (ENSOARG00020023145) #26	SRD5A1 (ENSOARG00020023075) #27	TENT4A (ENSOARG00020022831) #28	ENSOARG00020022762	ADCY2 (ENSOARG00020022595) #32	CFAP90 (ENSOARG00020022548) #34	FASTKD3 (ENSOARG00020022521) #35	MTRR (ENSOARG00020022449) #36	ENSOARG00020022435	SEMA5A (ENSOARG00020022080) #37	ENSOARG00020022027	ATPSCKMT (ENSOARG00020021986)	CCT5 (ENSOARG00020021843)
Bovinae	ANCESTRAL SPECIES	25	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00950000186039	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.d	ENSGT00940000156424 #32	ENSGT00910000148650 #33	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a
Bos	ANCESTRAL SPECIES	26	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00950000186039	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.d	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988
Bos_a	ANCESTRAL SPECIES	38	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Wild yak	MODERN SPECIES	2679																ENSBMUG00000022596 #22
Domestic yak	MODERN SPECIES	15	SLC12A7 (ENSBGRG00000007178)	ENSBGRG00000007512	SLC6A19 (ENSBGRG00000007536)	SLC6A18 (ENSBGRG00000007711)	TERT (ENSBGRG00000007850) #7	CLPTM1L (ENSBGRG00000008008) #8	SLC6A3 (ENSBGRG00000008417) #10	LPCAT1 (ENSBGRG00000008483)	ENSBGRG00000008559 #13	ENSBGRG00000008576 #14	IRX4 (ENSBGRG00000008624) #15	IRX2 (ENSBGRG00000008666) #16	IRX1 (ENSBGRG00000008805) #19	ADAMTS16 (ENSBGRG00000008878) #21	ENSBGRG00000009083	ENSBGRG00000009109 #22	ENSBGRG00000009147 #23	ENSBGRG00000009193 #25	ENSBGRG00000009262	NSUN2 (ENSBGRG00000009320) #26	SRD5A1 (ENSBGRG00000009686) #27	TENT4A (ENSBGRG00000009794) #28	ADCY2 (ENSBGRG00000009979) #32	CFAP90 (ENSBGRG00000011468) #34	FASTKD3 (ENSBGRG00000011515) #35	MTRR (ENSBGRG00000011588) #36	SEMA5A (ENSBGRG00000011867) #37	ENSBGRG00000012367	ATPSCKMT (ENSBGRG00000012505)	CCT5 (ENSBGRG00000012720)	CMBL (ENSBGRG00000013187)
Bos_b	ANCESTRAL SPECIES	29	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657.e	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00950000186039	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.d	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263481.n.a.a.a.a.a.a.b.b.a.a.b.b	ENSGT01100000263477.E	ENSGT00390000014771.a
Hybrid Bos Indicus	MODERN SPECIES	12	SLC12A7 (ENSBIXG00005026843)	SLC6A19 (ENSBIXG00005026916)	SLC6A18 (ENSBIXG00005026953)	TERT (ENSBIXG00005004650) #7	CLPTM1L (ENSBIXG00005006940) #8	SLC6A3 (ENSBIXG00005004683) #10	LPCAT1 (ENSBIXG00005027232)	ENSBIXG00005027272 #13	NDUFS6 (ENSBIXG00005004700) #14	IRX4 (ENSBIXG00005027355) #15	ENSBIXG00005027401	IRX2 (ENSBIXG00005027442) #16	IRX1 (ENSBIXG00005027510) #19	ENSBIXG00005027561	ADAMTS16 (ENSBIXG00005027878) #21	ICE1 (ENSBIXG00005006625) #22	MED10 (ENSBIXG00005006964) #23	ENSBIXG00005004816	UBE2QL1 (ENSBIXG00005028040) #25	NSUN2 (ENSBIXG00005028093) #26	SRD5A1 (ENSBIXG00005028127) #27	TENT4A (ENSBIXG00005028210) #28	ADCY2 (ENSBIXG00005028463) #32	CFAP90 (ENSBIXG00005006543) #34	FASTKD3 (ENSBIXG00005028543) #35	MTRR (ENSBIXG00005006640) #36	ENSBIXG00005002382	ENSBIXG00005028663	TAS2R1 (ENSBIXG00005028671)	ATPSCKMT (ENSBIXG00005028756)	CCT5 (ENSBIXG00005005013)
Cow	MODERN SPECIES	12	SLC12A7 (ENSBTAG00000006775)	ENSBTAG00000049547	SLC6A19 (ENSBTAG00000045695)	SLC6A18 (ENSBTAG00000012559)	TERT (ENSBTAG00000012567) #7	CLPTM1L (ENSBTAG00000001329) #8	SLC6A3 (ENSBTAG00000015843) #10	LPCAT1 (ENSBTAG00000000944)	ENSBTAG00000050317 #13	NDUFS6 (ENSBTAG00000009914) #14	IRX4 (ENSBTAG00000015907) #15	ENSBTAG00000054006	IRX2 (ENSBTAG00000047499) #16	IRX1 (ENSBTAG00000000809) #19	ADAMTS16 (ENSBTAG00000018460) #21	ICE1 (ENSBTAG00000018501) #22	ENSBTAG00000049304	MED10 (ENSBTAG00000008130) #23	UBE2QL1 (ENSBTAG00000048851) #25	NSUN2 (ENSBTAG00000015466) #26	SRD5A1 (ENSBTAG00000015478) #27	TENT4A (ENSBTAG00000003381) #28	ENSBTAG00000032442	ADCY2 (ENSBTAG00000019210) #32	CFAP90 (ENSBTAG00000055034) #34	FASTKD3 (ENSBTAG00000009400) #35	MTRR (ENSBTAG00000009401) #36	ENSBTAG00000051674	SEMA5A (ENSBTAG00000005021) #37	ENSBTAG00000052324	TAS2R1 (ENSBTAG00000032508)
American bison	MODERN SPECIES	3291	SLC9A3 (ENSBBBG00000017032)	CEP72 (ENSBBBG00000004199)	TPPP (ENSBBBG00000016941)	ENSBBBG00000004187	BRD9 (ENSBBBG00000016929)	TRIP13 (ENSBBBG00000016892)	SLC12A7 (ENSBBBG00000008296)	SLC6A19 (ENSBBBG00000016767)	SLC6A18 (ENSBBBG00000000711)	CLPTM1L (ENSBBBG00000016737) #8	SLC6A3 (ENSBBBG00000016720) #10	LPCAT1 (ENSBBBG00000016651)	ENSBBBG00000004122 #13	NDUFS6 (ENSBBBG00000016621) #14	ADAMTS16 (ENSBBBG00000004110) #21	ENSBBBG00000000735 #22	ENSBBBG00000000745	MED10 (ENSBBBG00000000761) #23	NSUN2 (ENSBBBG00000016571) #26	TENT4A (ENSBBBG00000016484) #28	ADCY2 (ENSBBBG00000016455) #32	ENSBBBG00000016418 #33	CFAP90 (ENSBBBG00000016415) #34	FASTKD3 (ENSBBBG00000016411) #35	MTRR (ENSBBBG00000016406) #36
Atlantogenata	ANCESTRAL SPECIES					ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b	ENSGT00390000012731.a.a
Xenarthra	ANCESTRAL SPECIES	1746															ENSGT00940000159433 #21	ENSGT00950000183199.b #22
Armadillo	MODERN SPECIES	276														ENSDNOG00000036615	ADAMTS16 (ENSDNOG00000001714) #21	ICE1 (ENSDNOG00000048762) #22
Sloth	MODERN SPECIES	5120																ENSCHOG00000004455 #22
Afrotheria	ANCESTRAL SPECIES	139				ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b	ENSGT00390000012731.a.a
Tenrec	MODERN SPECIES	5597																ENSETEG00000010960 #22
Afrotheria_a	ANCESTRAL SPECIES	140				ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b	ENSGT00390000012731.a.a
Elephant	MODERN SPECIES	526	DAP (ENSLAFG00000011209)	ANKRD33B (ENSLAFG00000011206)	ENSLAFG00000029202	SLC6A19 (ENSLAFG00000005422)	SLC6A18 (ENSLAFG00000006023)	TERT (ENSLAFG00000013077) #7	CLPTM1L (ENSLAFG00000012245) #8	SLC6A3 (ENSLAFG00000003040) #10	ENSLAFG00000011431	ENSLAFG00000005707 #13	ENSLAFG00000005708 #14	IRX4 (ENSLAFG00000000460) #15	IRX2 (ENSLAFG00000031893) #16	IRX1 (ENSLAFG00000012017) #19	ADAMTS16 (ENSLAFG00000011253) #21	ICE1 (ENSLAFG00000001334) #22	MED10 (ENSLAFG00000016146) #23	UBE2QL1 (ENSLAFG00000027273) #25	NSUN2 (ENSLAFG00000009411) #26	ENSLAFG00000012945 #27	TENT4A (ENSLAFG00000004787) #28	ADCY2 (ENSLAFG00000004954) #32	FASTKD3 (ENSLAFG00000016130) #35	MTRR (ENSLAFG00000018552) #36	SEMA5A (ENSLAFG00000003820) #37	ATPSCKMT (ENSLAFG00000022748)	CCT5 (ENSLAFG00000006113)	ENSLAFG00000028191	MARCHF6 (ENSLAFG00000007224)	ROPN1L (ENSLAFG00000011860)
Hyrax	MODERN SPECIES	4725																ENSPCAG00000002369 #22
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775.k #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000155584.db	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775.k #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000155584.db	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183
Diprotodontia	ANCESTRAL SPECIES	1	ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775.k #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT00390000017432	ENSGT00440000033589.d	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT00940000161224 #10	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775.k #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01100000263477.E	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183	ENSGT00940000155171.a.b
Common wonbat	MODERN SPECIES	1028	SLC12A7 (ENSVURG00010021732)	SLC6A19 (ENSVURG00010021711)	SLC6A18 (ENSVURG00010021703)	ENSVURG00010021696 #7	CLPTM1L (ENSVURG00010021677) #8	SLC6A3 (ENSVURG00010021583) #10	LPCAT1 (ENSVURG00010021564)	ENSVURG00010021553	MRPL36 (ENSVURG00010021548) #13	ENSVURG00010021544 #14	IRX4 (ENSVURG00010021536) #15	IRX2 (ENSVURG00010021523) #16	IRX1 (ENSVURG00010021515) #19	ENSVURG00010021507	ENSVURG00010021496 #21	ENSVURG00010021480 #22	MED10 (ENSVURG00010021467) #23	UBE2QL1 (ENSVURG00010021464) #25	NSUN2 (ENSVURG00010021458) #26	SRD5A1 (ENSVURG00010021454) #27	TENT4A (ENSVURG00010021451) #28	ENSVURG00010021441	ADCY2 (ENSVURG00010021414) #32	CFAP90 (ENSVURG00010021395) #34	FASTKD3 (ENSVURG00010021388) #35	MTRR (ENSVURG00010021377) #36	ENSVURG00010021370	SEMA5A (ENSVURG00010021360) #37	ENSVURG00010021351	ENSVURG00010021349	ATPSCKMT (ENSVURG00010021339)
koala	MODERN SPECIES	103															ADAMTS16 (ENSPCIG00000012782) #21	ENSPCIG00000012781 #22	ENSPCIG00000017587	ENSPCIG00000011859 #25	NSUN2 (ENSPCIG00000011853) #26	SRD5A1 (ENSPCIG00000011847) #27	TENT4A (ENSPCIG00000017056) #28	ADCY2 (ENSPCIG00000014091) #32	CFAP90 (ENSPCIG00000014077) #34	FASTKD3 (ENSPCIG00000013486) #35	MTRR (ENSPCIG00000013485) #36	ENSPCIG00000037244	SEMA5A (ENSPCIG00000023524) #37	ENSPCIG00000026977	ENSPCIG00000032710	ENSPCIG00000036637	ENSPCIG00000032320
Wallaby	MODERN SPECIES	6959																ENSMEUG00000008560 #22
Tasmanian devil	MODERN SPECIES		SLC12A7 (ENSSHAG00000014012)	SLC6A19 (ENSSHAG00000015547)	SLC6A18 (ENSSHAG00000015730)	ENSSHAG00000015951 #7	CLPTM1L (ENSSHAG00000016099) #8	SLC6A3 (ENSSHAG00000016299) #10	LPCAT1 (ENSSHAG00000016583)	MRPL36 (ENSSHAG00000024894) #13	NDUFS6 (ENSSHAG00000028770) #14	IRX4 (ENSSHAG00000023225) #15	IRX2 (ENSSHAG00000001675) #16	IRX1 (ENSSHAG00000013463) #19	ENSSHAG00000018018	ADAMTS16 (ENSSHAG00000018320) #21	ENSSHAG00000027523	ENSSHAG00000018751 #22	MED10 (ENSSHAG00000020951) #23	ENSSHAG00000030712 #25	NSUN2 (ENSSHAG00000011056) #26	SRD5A1 (ENSSHAG00000025750) #27	TENT4A (ENSSHAG00000012100) #28	ADCY2 (ENSSHAG00000002581) #32	CFAP90 (ENSSHAG00000027105) #34	FASTKD3 (ENSSHAG00000006423) #35	MTRR (ENSSHAG00000006711) #36	ENSSHAG00000004959	SEMA5A (ENSSHAG00000025721) #37	ENSSHAG00000030169	ATPSCKMT (ENSSHAG00000031295)	ENSSHAG00000025425	CMBL (ENSSHAG00000027779)
Opossum	MODERN SPECIES	2	SLC6A19 (ENSMODG00000000905)	SLC6A18 (ENSMODG00000000921)	ENSMODG00000000966 #7	CLPTM1L (ENSMODG00000000991) #8	SLC6A3 (ENSMODG00000001344) #10	LPCAT1 (ENSMODG00000001420)	ENSMODG00000050731	MRPL36 (ENSMODG00000025120) #13	ENSMODG00000001425 #14	IRX4 (ENSMODG00000001437) #15	IRX2 (ENSMODG00000001446) #16	ENSMODG00000041368	IRX1 (ENSMODG00000001451) #19	ENSMODG00000040922	ADAMTS16 (ENSMODG00000001523) #21	ENSMODG00000001540 #22	ENSMODG00000043624	MED10 (ENSMODG00000002025) #23	ENSMODG00000028962 #25	NSUN2 (ENSMODG00000002039) #26	SRD5A1 (ENSMODG00000002043) #27	TENT4A (ENSMODG00000002052) #28	ADCY2 (ENSMODG00000002081) #32	ENSMODG00000028752	C5orf49 (ENSMODG00000044895) #34	FASTKD3 (ENSMODG00000002094) #35	MTRR (ENSMODG00000002110) #36	ENSMODG00000029155	ENSMODG00000025110	SEMA5A (ENSMODG00000002138) #37	ENSMODG00000002327
Platypus	MODERN SPECIES	86	FHOD3 (ENSOANG00000014458)	MOCOS (ENSOANG00000014461)	PTPN3 (ENSOANG00000014464)	EPB41L4B (ENSOANG00000001740)	TMEM245 (ENSOANG00000001742)	INO80C (ENSOANG00000001743)	GALNT1 (ENSOANG00000001744)	ENSOANG00000001745	RPRD1A (ENSOANG00000001746)	ENSOANG00000047544	ENSOANG00000043142 #14	IRX4 (ENSOANG00000039153) #15	IRX2 (ENSOANG00000001748) #16	IRX1 (ENSOANG00000001749) #19	ADAMTS16 (ENSOANG00000001750) #21	ENSOANG00000001751 #22	MED10 (ENSOANG00000001752) #23	ENSOANG00000001753 #25	NSUN2 (ENSOANG00000009243) #26	SRD5A1 (ENSOANG00000041870) #27	TENT4A (ENSOANG00000011579) #28	ADCY2 (ENSOANG00000011580) #32	C5orf49 (ENSOANG00000036348) #34	MTRR (ENSOANG00000011583) #36	SEMA5A (ENSOANG00000011586) #37	ATPSCKMT (ENSOANG00000011590)	CCT5 (ENSOANG00000011592)	CMBL (ENSOANG00000011594)	MARCHF6 (ENSOANG00000011595)	ROPN1L (ENSOANG00000011597)	ENSOANG00000011598
Sauria	ANCESTRAL SPECIES		ENSGT00950000183170.b.a	ENSGT00390000017432	ENSGT00940000158302.e	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01030000235349	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00390000000183.g.a	ENSGT00390000000183.g.b
Lepidosauria	DUPLICATION
Lepidosauria	ANCESTRAL SPECIES	105				ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b.a #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT01030000235349	ENSGT00390000014771.a	ENSGT00550000074988
Episquamata	ANCESTRAL SPECIES	1	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b.b #22	ENSGT00950000183199.b.a #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00940000154755	ENSGT00940000164218	ENSGT00940000156996
Laterata	ANCESTRAL SPECIES	5	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT01030000234574.A.a	ENSGT00940000173658	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b.a #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00940000154755	ENSGT00940000164218	ENSGT00940000166261.a
Common wall lizard	MODERN SPECIES	15	ENSPMRG00000011409	ENSPMRG00000011548	TERT (ENSPMRG00000011747) #7	CLPTM1L (ENSPMRG00000011767) #8	LPCAT1 (ENSPMRG00000011784)	ENSPMRG00000011792	NDUFS6 (ENSPMRG00000011794) #14	ENSPMRG00000011796 #15	ENSPMRG00000011802 #16	IRX2 (ENSPMRG00000011806) #16	ENSPMRG00000011810	IRX1 (ENSPMRG00000011814) #19	ADAMTS16 (ENSPMRG00000011831) #21	ENSPMRG00000011923	ENSPMRG00000011964 #22	ENSPMRG00000011956 #22	MED10 (ENSPMRG00000011969) #23	UBE2QL1 (ENSPMRG00000011973) #25	NSUN2 (ENSPMRG00000012047) #26	SRD5A1 (ENSPMRG00000012693) #27	NAA16 (ENSPMRG00000012722)	ENSPMRG00000012863	RGCC (ENSPMRG00000012868)	VWA8 (ENSPMRG00000012925)	DGKH (ENSPMRG00000013494)	AKAP11 (ENSPMRG00000014100)	TNFSF11 (ENSPMRG00000014191)	ENSPMRG00000014214	DNAJC15 (ENSPMRG00000005799)	ENOX1 (ENSPMRG00000005813)	ENSPMRG00000005845
Argentine black and white tegu	MODERN SPECIES	36	SLC12A7 (ENSSMRG00000015175)	ENSSMRG00000015179	SLC6A19 (ENSSMRG00000015180)	SLC6A18 (ENSSMRG00000015183)	TERT (ENSSMRG00000015501) #7	CLPTM1L (ENSSMRG00000015502) #8	LPCAT1 (ENSSMRG00000015505)	ENSSMRG00000015507	ENSSMRG00000015508 #14	IRX4 (ENSSMRG00000015509) #15	IRX2 (ENSSMRG00000015513) #16	ENSSMRG00000015516	IRX1 (ENSSMRG00000015517) #19	ENSSMRG00000015520	ADAMTS16 (ENSSMRG00000015527) #21	ICE1 (ENSSMRG00000015530) #22	MED10 (ENSSMRG00000015532) #23	UBE2QL1 (ENSSMRG00000015533) #25	NSUN2 (ENSSMRG00000015535) #26	SRD5A1 (ENSSMRG00000015538) #27	TENT4A (ENSSMRG00000015539) #28	ADCY2 (ENSSMRG00000015544) #32	ENSSMRG00000016193	CFAP90 (ENSSMRG00000016195) #34	FASTKD3 (ENSSMRG00000016197) #35	MTRR (ENSSMRG00000016199) #36	SEMA5A (ENSSMRG00000016201) #37	ATPSCKMT (ENSSMRG00000016204)	CCT5 (ENSSMRG00000016206)	ENSSMRG00000016209	CST3 (ENSSMRG00000016211)
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b.b #22	ENSGT00950000183199.b.a #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a.h	ENSGT00550000074988	ENSGT00940000154755	ENSGT00940000167312	ENSGT00940000156996
Elapidae	ANCESTRAL SPECIES	8	ENSGT00940000160714.c	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT01030000234574.A.a	ENSGT00940000173658	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b.b #22	ENSGT00950000183199.b.a #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a.h	ENSGT00550000074988	ENSGT00940000154755	ENSGT00940000167312	ENSGT00940000156996
Indian cobra	MODERN SPECIES	2	TMEFF1 (ENSNNAG00000001223)	CAVIN4 (ENSNNAG00000001218)	SLC12A7 (ENSNNAG00000001119)	SLC6A19 (ENSNNAG00000001042)	SLC6A18 (ENSNNAG00000000999)	TERT (ENSNNAG00000000941) #7	CLPTM1L (ENSNNAG00000000922) #8	LPCAT1 (ENSNNAG00000000898)	ENSNNAG00000000889	NDUFS6 (ENSNNAG00000000877) #14	IRX4 (ENSNNAG00000000859) #15	IRX2 (ENSNNAG00000000840) #16	IRX1 (ENSNNAG00000000813) #19	ADAMTS16 (ENSNNAG00000014273) #21	ENSNNAG00000014247	ENSNNAG00000014147 #22	MED10 (ENSNNAG00000014120) #23	UBE2QL1 (ENSNNAG00000014111) #25	NSUN2 (ENSNNAG00000014006) #26	SRD5A1 (ENSNNAG00000013987) #27	TENT4A (ENSNNAG00000013975) #28	ADCY2 (ENSNNAG00000012796) #32	CFAP90 (ENSNNAG00000012693) #34	FASTKD3 (ENSNNAG00000012636) #35	MTRR (ENSNNAG00000012393) #36	SEMA5A (ENSNNAG00000012300) #37	ENSNNAG00000012269	CCT5 (ENSNNAG00000012242)	ENSNNAG00000012223	ENSNNAG00000012207	ENSNNAG00000012195
Elapidae_a	ANCESTRAL SPECIES	35	ENSGT00940000160714.c	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT01030000234574.A.a	ENSGT00940000173658	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b.b #22	ENSGT00950000183199.b.a #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a.h	ENSGT00550000074988	ENSGT00940000154755	ENSGT00940000167312	ENSGT00940000156996
Acanthophiinae	ANCESTRAL SPECIES	35	ENSGT00940000160714.c	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT01030000234574.A.a	ENSGT00940000173658	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b.b #22	ENSGT00950000183199.b.a #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a.h	ENSGT00550000074988	ENSGT00940000154755	ENSGT00940000167312	ENSGT00940000155999
Eastern brown snake	MODERN SPECIES	15	CAVIN4 (ENSPTXG00000004134)	SLC12A7 (ENSPTXG00000004132)	SLC6A19 (ENSPTXG00000004129)	ENSPTXG00000004128	TERT (ENSPTXG00000004127) #7	ENSPTXG00000004126	CLPTM1L (ENSPTXG00000004125) #8	LPCAT1 (ENSPTXG00000004123)	ENSPTXG00000004122	NDUFS6 (ENSPTXG00000004121) #14	IRX4 (ENSPTXG00000004120) #15	IRX2 (ENSPTXG00000004119) #16	IRX1 (ENSPTXG00000004118) #19	ADAMTS16 (ENSPTXG00000004117) #21	ENSPTXG00000004116 #22	ENSPTXG00000004115 #22	MED10 (ENSPTXG00000004114) #23	UBE2QL1 (ENSPTXG00000004113) #25	NSUN2 (ENSPTXG00000003936) #26	SRD5A1 (ENSPTXG00000003935) #27	TENT4A (ENSPTXG00000003934) #28	ADCY2 (ENSPTXG00000003858) #32	CFAP90 (ENSPTXG00000003856) #34	FASTKD3 (ENSPTXG00000003854) #35	MTRR (ENSPTXG00000003852) #36	SEMA5A (ENSPTXG00000003851) #37	ATPSCKMT (ENSPTXG00000003849)	CCT5 (ENSPTXG00000003847)	ENSPTXG00000003846	ENSPTXG00000003845	FOXA2 (ENSPTXG00000003844)
Mainland tiger snake	MODERN SPECIES	45	ABITRAM (ENSNSUG00000010032)	SLC39A6 (ENSNSUG00000010034)	TMEFF1 (ENSNSUG00000010036)	CAVIN4 (ENSNSUG00000010038)	SLC12A7 (ENSNSUG00000010041)	SLC6A19 (ENSNSUG00000010044)	TERT (ENSNSUG00000010047) #7	CLPTM1L (ENSNSUG00000010147) #8	LPCAT1 (ENSNSUG00000010206)	ENSNSUG00000010207	ENSNSUG00000010208 #14	IRX4 (ENSNSUG00000010212) #15	IRX2 (ENSNSUG00000010220) #16	IRX1 (ENSNSUG00000010225) #19	ADAMTS16 (ENSNSUG00000010227) #21	ENSNSUG00000010240 #22	MED10 (ENSNSUG00000010241) #23	UBE2QL1 (ENSNSUG00000010242) #25	NSUN2 (ENSNSUG00000010245) #26	SRD5A1 (ENSNSUG00000010410) #27	ENSNSUG00000010413	TENT4A (ENSNSUG00000010414) #28	ADCY2 (ENSNSUG00000010421) #32	ENSNSUG00000010690 #34	FASTKD3 (ENSNSUG00000010691) #35	MTRR (ENSNSUG00000010692) #36	SEMA5A (ENSNSUG00000010721) #37	ATPSCKMT (ENSNSUG00000010722)	CCT5 (ENSNSUG00000010732)	ENSNSUG00000010733	ENSNSUG00000010734
Blue-lipped sea krait	MODERN SPECIES	10728																ENSLLTG00000011284 #22
Lizard	MODERN SPECIES	825															ADAMTS16 (ENSACAG00000000648) #21	ICE1 (ENSACAG00000039643) #22	MED10 (ENSACAG00000000792) #23	UBE2QL1 (ENSACAG00000038943) #25	ENSACAG00000005628	ENSACAG00000005665	HENMT1 (ENSACAG00000005696)	ENSACAG00000028682	ENSACAG00000042891	STXBP3 (ENSACAG00000005770)	ENSACAG00000037276	ENSACAG00000036406	GPSM2 (ENSACAG00000006029)	CLCC1 (ENSACAG00000006088)	WDR47 (ENSACAG00000006120)	CAMSAP2 (ENSACAG00000006193)	DDX59 (ENSACAG00000006225)
tuatara	MODERN SPECIES	1802														ADAMTS16 (ENSSPUG00000014801) #21	ENSSPUG00000014789	ENSSPUG00000014759 #22
Lepidosauria	ANCESTRAL SPECIES																	ENSGT00950000183199.b.b #22
Episquamata	ANCESTRAL SPECIES	1	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b.b #22	ENSGT00950000183199.b.a #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00940000154755	ENSGT00940000164218
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00940000156387	ENSGT00940000160714	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT01030000234574.A.a	ENSGT00390000010866 #13	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b.b #22	ENSGT00950000183199.b.a #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a.h	ENSGT00550000074988	ENSGT00940000154755	ENSGT00940000167312
Elapidae	ANCESTRAL SPECIES	8	ENSGT00940000156387	ENSGT00940000160714.c	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT01030000234574.A.a	ENSGT00940000173658	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b.b #22	ENSGT00950000183199.b.a #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a.h	ENSGT00550000074988	ENSGT00940000154755	ENSGT00940000167312
Elapidae_a	ANCESTRAL SPECIES	35	ENSGT00940000156387.i	ENSGT00940000160714.c	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT01030000234574.A.a	ENSGT00940000173658	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b.b #22	ENSGT00950000183199.b.a #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a.h	ENSGT00550000074988	ENSGT00940000154755	ENSGT00940000167312
Acanthophiinae	ANCESTRAL SPECIES	35	ENSGT00940000156387.i	ENSGT00940000160714.c	ENSGT00950000182910.a.b	ENSGT00940000157657	ENSGT00940000154896	ENSGT00940000158906	ENSGT00390000018531 #7	ENSGT00530000063461.A #8	ENSGT01030000234574.A.a	ENSGT00940000173658	ENSGT00390000015775 #14	ENSGT00940000158596 #15	ENSGT00940000161198 #16	ENSGT00940000160429 #19	ENSGT00940000159433 #21	ENSGT00950000183199.b.b #22	ENSGT00950000183199.b.a #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a.h	ENSGT00550000074988	ENSGT00940000154755	ENSGT00940000167312
Eastern brown snake	MODERN SPECIES	15	TMEFF1 (ENSPTXG00000004135)	CAVIN4 (ENSPTXG00000004134)	SLC12A7 (ENSPTXG00000004132)	SLC6A19 (ENSPTXG00000004129)	ENSPTXG00000004128	TERT (ENSPTXG00000004127) #7	ENSPTXG00000004126	CLPTM1L (ENSPTXG00000004125) #8	LPCAT1 (ENSPTXG00000004123)	ENSPTXG00000004122	NDUFS6 (ENSPTXG00000004121) #14	IRX4 (ENSPTXG00000004120) #15	IRX2 (ENSPTXG00000004119) #16	IRX1 (ENSPTXG00000004118) #19	ADAMTS16 (ENSPTXG00000004117) #21	ENSPTXG00000004116 #22	ENSPTXG00000004115 #22	MED10 (ENSPTXG00000004114) #23	UBE2QL1 (ENSPTXG00000004113) #25	NSUN2 (ENSPTXG00000003936) #26	SRD5A1 (ENSPTXG00000003935) #27	TENT4A (ENSPTXG00000003934) #28	ADCY2 (ENSPTXG00000003858) #32	CFAP90 (ENSPTXG00000003856) #34	FASTKD3 (ENSPTXG00000003854) #35	MTRR (ENSPTXG00000003852) #36	SEMA5A (ENSPTXG00000003851) #37	ATPSCKMT (ENSPTXG00000003849)	CCT5 (ENSPTXG00000003847)	ENSPTXG00000003846	ENSPTXG00000003845
Laterata	ANCESTRAL SPECIES																	ENSGT00950000183199.b.b #22
Common wall lizard	MODERN SPECIES	15	ENSPMRG00000011377	ENSPMRG00000011409	ENSPMRG00000011548	TERT (ENSPMRG00000011747) #7	CLPTM1L (ENSPMRG00000011767) #8	LPCAT1 (ENSPMRG00000011784)	ENSPMRG00000011792	NDUFS6 (ENSPMRG00000011794) #14	ENSPMRG00000011796 #15	ENSPMRG00000011802 #16	IRX2 (ENSPMRG00000011806) #16	ENSPMRG00000011810	IRX1 (ENSPMRG00000011814) #19	ADAMTS16 (ENSPMRG00000011831) #21	ENSPMRG00000011923	ENSPMRG00000011964 #22	ENSPMRG00000011956 #22	MED10 (ENSPMRG00000011969) #23	UBE2QL1 (ENSPMRG00000011973) #25	NSUN2 (ENSPMRG00000012047) #26	SRD5A1 (ENSPMRG00000012693) #27	NAA16 (ENSPMRG00000012722)	ENSPMRG00000012863	RGCC (ENSPMRG00000012868)	VWA8 (ENSPMRG00000012925)	DGKH (ENSPMRG00000013494)	AKAP11 (ENSPMRG00000014100)	TNFSF11 (ENSPMRG00000014191)	ENSPMRG00000014214	DNAJC15 (ENSPMRG00000005799)	ENOX1 (ENSPMRG00000005813)
Archelosauria	ANCESTRAL SPECIES	5															ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00940000161663	ENSGT00390000000183.g.a	ENSGT00390000000183.g.b
Cryptodira	ANCESTRAL SPECIES	46	ENSGT00940000155783	ENSGT00940000157173	ENSGT00940000157664	ENSGT00940000160429 #19	ENSGT00940000161198 #16	ENSGT00940000158596 #15	ENSGT00390000015775 #14	ENSGT00390000010866 #13	ENSGT01030000234574.A.a	ENSGT00530000063461.A #8	ENSGT00390000018531 #7	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00940000161663	ENSGT00390000000183.g.a	ENSGT00390000000183.h
Testudinoidea	ANCESTRAL SPECIES	8	ENSGT00940000157173	ENSGT00940000157664	ENSGT00940000160429 #19	ENSGT00940000161198 #16	ENSGT00940000158596 #15	ENSGT00390000015775 #14	ENSGT00390000010866 #13	ENSGT01030000234574.A.a	ENSGT00530000063461.A #8	ENSGT00390000018531 #7	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000156325	ENSGT00940000157657	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00940000161663	ENSGT00390000000183.g.a	ENSGT00390000000183.h
Emydidae	ANCESTRAL SPECIES	58	ENSGT00940000155783	ENSGT00940000157173	ENSGT00940000157664	ENSGT00940000160429 #19	ENSGT00940000161198 #16	ENSGT00940000158596 #15	ENSGT00390000015775 #14	ENSGT00390000010866 #13	ENSGT01030000234574.A.a	ENSGT00530000063461.A #8	ENSGT00390000018531 #7	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000157657	ENSGT00940000159433 #21	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00940000161663	ENSGT00390000000183.g.a	ENSGT00390000000183.h
Three-toed box turtle	DUPLICATION
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	2575																ENSTMTG00000013521 #22
Three-toed box turtle	MODERN SPECIES	2572																ENSTMTG00000013482 #22
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	280													ENSTMTG00000009916	ENSTMTG00000010300	ENSTMTG00000010347 #21	ENSTMTG00000010368 #22	ENSTMTG00000010389 #22	MED10 (ENSTMTG00000010416) #23	UBE2QL1 (ENSTMTG00000010432) #25	NSUN2 (ENSTMTG00000003351) #26	SRD5A1 (ENSTMTG00000003412) #27	ENSTMTG00000003488	TENT4A (ENSTMTG00000003526) #28	ADCY2 (ENSTMTG00000003668) #32	CFAP90 (ENSTMTG00000004150) #34	FASTKD3 (ENSTMTG00000004174) #35	MTRR (ENSTMTG00000004193) #36	SEMA5A (ENSTMTG00000004239) #37	ATPSCKMT (ENSTMTG00000004376)	CCT5 (ENSTMTG00000004387)	SBK2 (ENSTMTG00000004421)
Three-toed box turtle	MODERN SPECIES	280												ENSTMTG00000009916	ENSTMTG00000010300	ENSTMTG00000010347 #21	ENSTMTG00000010368 #22	ENSTMTG00000010389 #22	MED10 (ENSTMTG00000010416) #23	UBE2QL1 (ENSTMTG00000010432) #25	NSUN2 (ENSTMTG00000003351) #26	SRD5A1 (ENSTMTG00000003412) #27	ENSTMTG00000003488	TENT4A (ENSTMTG00000003526) #28	ADCY2 (ENSTMTG00000003668) #32	CFAP90 (ENSTMTG00000004150) #34	FASTKD3 (ENSTMTG00000004174) #35	MTRR (ENSTMTG00000004193) #36	SEMA5A (ENSTMTG00000004239) #37	ATPSCKMT (ENSTMTG00000004376)	CCT5 (ENSTMTG00000004387)	SBK2 (ENSTMTG00000004421)	ENSTMTG00000004453
painted turtle	MODERN SPECIES	1159																ENSCPBG00000016289 #22
Testudinidae	ANCESTRAL SPECIES	1	ENSGT00940000155783	ENSGT00940000157173	ENSGT00940000157664	ENSGT00940000160429 #19	ENSGT00940000161198 #16	ENSGT00940000158596 #15	ENSGT00390000015775 #14	ENSGT00390000010866 #13	ENSGT01030000234574.A.a	ENSGT00530000063461.A #8	ENSGT00390000018531 #7	ENSGT00940000158906	ENSGT00940000154896	ENSGT00940000156325	ENSGT00940000157657	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00940000161663	ENSGT00390000000183.g.a	ENSGT00390000000183.h
Goode s thornscrub tortoise	MODERN SPECIES	11	GALNT12 (ENSGEVG00005001835)	ANKS6 (ENSGEVG00005001910)	IRX1 (ENSGEVG00005001973) #19	IRX2 (ENSGEVG00005001979) #16	IRX4 (ENSGEVG00005001991) #15	NDUFS6 (ENSGEVG00005002002) #14	MRPL36 (ENSGEVG00005002011) #13	LPCAT1 (ENSGEVG00005002021)	CLPTM1L (ENSGEVG00005002056) #8	TERT (ENSGEVG00005002124) #7	SLC6A18 (ENSGEVG00005002163)	SLC6A19 (ENSGEVG00005002227)	ENSGEVG00005002238	NFX1 (ENSGEVG00005002297)	SLC12A7 (ENSGEVG00005002517)	ICE1 (ENSGEVG00005002555) #22	MED10 (ENSGEVG00005002588) #23	UBE2QL1 (ENSGEVG00005002594) #25	NSUN2 (ENSGEVG00005002603) #26	SRD5A1 (ENSGEVG00005002624) #27	ENSGEVG00005002633	TENT4A (ENSGEVG00005002646) #28	ADCY2 (ENSGEVG00005002733) #32	ENSGEVG00005002928	CFAP90 (ENSGEVG00005002941) #34	FASTKD3 (ENSGEVG00005002955) #35	MTRR (ENSGEVG00005002968) #36	ENSGEVG00005002987	SEMA5A (ENSGEVG00005003004) #37	ATPSCKMT (ENSGEVG00005003039)	CCT5 (ENSGEVG00005003051)
Abingdon island giant tortoise	MODERN SPECIES	2256													NFX1 (ENSCABG00000008184)	ENSCABG00000008899	ENSCABG00000008902	ENSCABG00000008906 #22
Chinese turtle	MODERN SPECIES	1365															ENSPSIG00000008803	ENSPSIG00000014439 #22	ENSPSIG00000000027	MED10 (ENSPSIG00000015211) #23	UBE2QL1 (ENSPSIG00000015214) #25	NSUN2 (ENSPSIG00000015282) #26	SRD5A1 (ENSPSIG00000015950) #27	TENT4A (ENSPSIG00000015964) #28	ENSPSIG00000005586	ENSPSIG00000005902	ENSPSIG00000006888	ENSPSIG00000007164	FBXO3 (ENSPSIG00000007269)	LMO2 (ENSPSIG00000007568)	CAPRIN1 (ENSPSIG00000007750)
Archosauria	ANCESTRAL SPECIES		ENSGT00530000067915	ENSGT00390000020276.rb	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000164061	ENSGT01030000234531.C	ENSGT00940000162507.A	ENSGT00940000158616	ENSGT00530000063884.a	ENSGT00940000153875.c	ENSGT00950000183170.b.a	ENSGT00390000017432	ENSGT00940000158302.e	ENSGT00940000157657	ENSGT00940000156325	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00940000161663	ENSGT00390000000183.g.a	ENSGT00390000000183.g.b
Australian saltwater crocodile	MODERN SPECIES		NR4A3 (ENSCPRG00005013476)	SEC61B (ENSCPRG00005013467)	ALG2 (ENSCPRG00005013466)	ENSCPRG00005013457	GLIPR2 (ENSCPRG00005013455)	ENSCPRG00005013453	RECK (ENSCPRG00005013445)	ENSCPRG00005013435	TGFBR1 (ENSCPRG00005013433)	ENSCPRG00005013429	SLC9A3 (ENSCPRG00005013422)	CEP72 (ENSCPRG00005013408)	TPPP (ENSCPRG00005013403)	SLC12A7 (ENSCPRG00005012667)	NFX1 (ENSCPRG00005012491)	ENSCPRG00005012478 #22	TNS3 (ENSCPRG00005012409)	IGFBP3 (ENSCPRG00005012380)	IGFBP1 (ENSCPRG00005012333)	ADCY1 (ENSCPRG00005012310)	RAMP3 (ENSCPRG00005012244)	PDIA4 (ENSCPRG00005012218)	EZH2 (ENSCPRG00005012115)	CUL1 (ENSCPRG00005012085)	CNTNAP2 (ENSCPRG00005012040)	TPK1 (ENSCPRG00005011870)	SEC61G (ENSCPRG00005011725)	ENSCPRG00005011724	EGFR (ENSCPRG00005011649)	LANCL2 (ENSCPRG00005011572)	VOPP1 (ENSCPRG00005011565)
Aves	ANCESTRAL SPECIES	24	ENSGT00550000075033	ENSGT00530000067915	ENSGT00390000020276.rb	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000164061	ENSGT01030000234531.C	ENSGT00940000162507.A	ENSGT00940000158616	ENSGT00940000153875.c	ENSGT00950000183170.b.a	ENSGT00390000017432	ENSGT00940000158302.e	ENSGT00940000157657	ENSGT00940000156325	ENSGT00950000183199.b #22	ENSGT00390000014501 #23	ENSGT00940000161612 #25	ENSGT00940000153665.a #26	ENSGT00950000182886.b.b #27	ENSGT00940000157811 #28	ENSGT00940000156424 #32	ENSGT00390000015121 #34	ENSGT01030000234607.A.a.a.a #35	ENSGT00940000155822 #36	ENSGT00940000158036 #37	ENSGT00390000014771.a	ENSGT00550000074988	ENSGT00940000161663	ENSGT00390000000183.g.a	ENSGT00390000000183.g.b
Neognathae	ANCESTRAL SPECIES		ENSGT00940000162740.f.b	ENSGT00940000162740.e	ENSGT00390000011362	ENSGT00530000063631.a	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000164061	ENSGT01030000234531.C	ENSGT00940000158616	ENSGT00940000153875.c	ENSGT00950000183170.b.a	ENSGT00390000017432	ENSGT00940000158302.e	ENSGT00940000157657	ENSGT00940000156325	ENSGT00950000183199.b #22	ENSGT00390000000706	ENSGT00940000156328.b	ENSGT00940000158092	ENSGT00940000157394	ENSGT00940000154872.C	ENSGT00940000161026	ENSGT00940000157738	ENSGT00940000155013	ENSGT00940000154774	ENSGT00940000154516.b	ENSGT00390000016016.A	ENSGT00390000001319	ENSGT00940000155450	ENSGT01040000241072	ENSGT00530000063186.b.a
Neognathae_b	ANCESTRAL SPECIES	3	ENSGT00940000162740.f.a	ENSGT00940000162740.f.b	ENSGT00940000162740.e	ENSGT00390000011362	ENSGT00530000063631.a	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a	ENSGT00940000153875.c	ENSGT00940000158616	ENSGT01030000234531.C	ENSGT00940000157657	ENSGT00940000156325	ENSGT00950000183199.b #22	ENSGT00390000000706	ENSGT00940000156328.b	ENSGT00940000158092	ENSGT00940000157394	ENSGT00940000154872.C	ENSGT00940000161026	ENSGT00940000157738	ENSGT00940000155013	ENSGT00940000154774	ENSGT00940000154516.b	ENSGT00390000016016.A	ENSGT00390000001319	ENSGT00940000155450	ENSGT01040000241072	ENSGT00530000063186.b.a
Passeriformes	ANCESTRAL SPECIES		ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.a.b	ENSGT00960000190022	ENSGT00960000189317	ENSGT00940000153143.a.b.a.a.b	ENSGT00940000153143.a.b.a.a.a	ENSGT00530000063564.a	ENSGT00730000111139	ENSGT00940000156503	ENSGT00940000159827	ENSGT00390000005586	ENSGT00940000155331.A	ENSGT00940000157657	ENSGT00940000156325	ENSGT00950000183199.b #22	ENSGT00390000000706	ENSGT00940000156328.b	ENSGT00940000158092	ENSGT00940000157394	ENSGT00940000154872.C	ENSGT00940000161026	ENSGT01030000234531.C	ENSGT00940000158616	ENSGT00940000153875.c	ENSGT00950000183170.b.a	ENSGT00390000017432	ENSGT00940000158302.e	ENSGT00940000156394	ENSGT00390000018540	ENSGT00530000063631.a
Great tit	MODERN SPECIES	11	RPS21 (ENSPMJG00000018126)	POU6F2 (ENSPMJG00000018124)	VPS41 (ENSPMJG00000018123)	AMPH (ENSPMJG00000018122)	ENSPMJG00000018121	ENSPMJG00000018120	ENSPMJG00000018067	LRRFIP2 (ENSPMJG00000018066)	GOLGA4 (ENSPMJG00000018065)	ITGA9 (ENSPMJG00000018064)	NEUROD6 (ENSPMJG00000018063)	ENSPMJG00000018062	PDE1C (ENSPMJG00000018061)	ENSPMJG00000018060	NFX1 (ENSPMJG00000018059)	ENSPMJG00000018057 #22	HUS1 (ENSPMJG00000018055)	YAE1 (ENSPMJG00000018053)	ENSPMJG00000018052	RALA (ENSPMJG00000018050)	CDK13 (ENSPMJG00000018048)	MPLKIP (ENSPMJG00000018047)	SUGCT (ENSPMJG00000018046)	INHBA (ENSPMJG00000018042)	GLI3 (ENSPMJG00000018041)	C7orf25 (ENSPMJG00000018040)	PSMA2 (ENSPMJG00000018039)	MRPL32 (ENSPMJG00000018038)	TNS3 (ENSPMJG00000018037)	COA1 (ENSPMJG00000018036)	STK17A (ENSPMJG00000018035)
Passeriformes_d	ANCESTRAL SPECIES		ENSGT00940000156175	ENSGT00390000000481	ENSGT00950000182882.A.b.a	ENSGT00940000153143.a.b.a.b	ENSGT00960000190022	ENSGT00960000189317	ENSGT00940000153143.a.b.a.a.b	ENSGT00530000063564.a	ENSGT00730000111139	ENSGT00940000156503	ENSGT00940000159827	ENSGT00390000005586	ENSGT00940000155331.A	ENSGT00940000157657	ENSGT00940000156325	ENSGT00950000183199.b #22	ENSGT00390000000706	ENSGT00940000156328.b	ENSGT00940000158092	ENSGT00940000157394	ENSGT00940000154872.C	ENSGT00940000161026	ENSGT01030000234531.C	ENSGT00940000158616	ENSGT00940000153875.c	ENSGT00950000183170.b.a	ENSGT00390000017432	ENSGT00940000158302.e	ENSGT00940000156394	ENSGT00390000018540	ENSGT00530000063631.a
Passeriformes_g	ANCESTRAL SPECIES	3												ENSGT00940000155331.A	ENSGT00390000005586	ENSGT00940000157657	ENSGT00940000156325	ENSGT00950000183199.b #22	ENSGT00390000000706	ENSGT00940000156328.b	ENSGT00940000158092	ENSGT00940000157394	ENSGT00940000154872.C	ENSGT00940000161026	ENSGT01030000234531.C	ENSGT00940000158616	ENSGT00940000153875.c	ENSGT00950000183170.b.a	ENSGT00390000017432	ENSGT00940000158302.e	ENSGT00940000156394	ENSGT00390000018540	ENSGT00530000063631.a
Passeroidea	ANCESTRAL SPECIES	2												ENSGT00940000155331.A	ENSGT00390000005586	ENSGT00940000157657	ENSGT00940000156325	ENSGT00950000183199.b #22	ENSGT00390000000706	ENSGT00940000156328.b	ENSGT00940000158092	ENSGT00940000157394	ENSGT00940000154872.C	ENSGT00940000161026	ENSGT01030000234531.C	ENSGT00940000158616	ENSGT00940000153875.c	ENSGT00950000183170.b.a	ENSGT00390000017432	ENSGT00940000158302.e	ENSGT00940000156394	ENSGT00390000018540	ENSGT00530000063631.a
Zebra finch	MODERN SPECIES	12	ENSTGUG00000026378	ADNP2 (ENSTGUG00000006688)	RECK (ENSTGUG00000006692)	TGFBR1 (ENSTGUG00000006726)	COL15A1 (ENSTGUG00000025718)	TRIP13 (ENSTGUG00000006756)	BRD9 (ENSTGUG00000006776)	TPPP (ENSTGUG00000006796)	SLC9A3 (ENSTGUG00000006804)	LRRC14B (ENSTGUG00000006854)	PDE1C (ENSTGUG00000006857)	PPP1R17 (ENSTGUG00000006926)	ENSTGUG00000019076	ENSTGUG00000006931	NFX1 (ENSTGUG00000007055)	ENSTGUG00000007087 #22	HUS1 (ENSTGUG00000007091)	TNS3 (ENSTGUG00000007104)	RAMP3 (ENSTGUG00000025072)	ADCY1 (ENSTGUG00000007142)	IGFBP1 (ENSTGUG00000007176)	IGFBP3 (ENSTGUG00000028736)	CDH18 (ENSTGUG00000007189)	BASP1 (ENSTGUG00000007269)	MYO10 (ENSTGUG00000007271)	ZNF622 (ENSTGUG00000007377)	MARCHF11 (ENSTGUG00000007392)	FBXL7 (ENSTGUG00000027230)	ANKH (ENSTGUG00000007404)	OTULIN (ENSTGUG00000007427)	OTULINL (ENSTGUG00000007437)
Common canary	MODERN SPECIES	36	CMTM3 (ENSSCAG00000010838)	TK2 (ENSSCAG00000010828)	ENSSCAG00000010823	CDH5 (ENSSCAG00000010812)	CDH11 (ENSSCAG00000010804)	ENSSCAG00000010799	ENSSCAG00000010795	SNRPA (ENSSCAG00000010792)	ENSSCAG00000010787	NEUROD6 (ENSSCAG00000010784)	ENSSCAG00000010778	PDE1C (ENSSCAG00000010755)	PPP1R17 (ENSSCAG00000010734)	ENSSCAG00000010722	NFX1 (ENSSCAG00000010694)	ENSSCAG00000010663 #22	ENSSCAG00000010553	ARPP21 (ENSSCAG00000010517)	STAC (ENSSCAG00000010507)	DCLK3 (ENSSCAG00000010500)	TRANK1 (ENSSCAG00000010488)	MLH1 (ENSSCAG00000010474)	STARD3NL (ENSSCAG00000010471)	EPDR1 (ENSSCAG00000010467)	SFRP4 (ENSSCAG00000010462)	ENSSCAG00000010456	ENSSCAG00000010449	ENSSCAG00000010445	GPR141 (ENSSCAG00000010442)	ELMO1 (ENSSCAG00000010176)	AOAH (ENSSCAG00000010102)
Medium ground finch	MODERN SPECIES	142												PPP1R17 (ENSGFOG00000002988)	ENSGFOG00000002968	ENSGFOG00000002808	NFX1 (ENSGFOG00000002757)	ENSGFOG00000002742 #22	HUS1 (ENSGFOG00000002727)	ENSGFOG00000002721	TNS3 (ENSGFOG00000002178)	ENSGFOG00000014580	IGFBP1 (ENSGFOG00000014576)	ADCY1 (ENSGFOG00000014571)	ENSGFOG00000014568	RAMP3 (ENSGFOG00000014564)
Flycatcher	MODERN SPECIES	11	ENSFALG00000025369	YAE1 (ENSFALG00000027550)	POU6F2 (ENSFALG00000005224)	VPS41 (ENSFALG00000005238)	AMPH (ENSFALG00000012192)	ENSFALG00000012205	ENSFALG00000023119	LRRFIP2 (ENSFALG00000012219)	ENSFALG00000013077	ITGA9 (ENSFALG00000013091)	ENSFALG00000014089	PDE1C (ENSFALG00000013120)	PPP1R17 (ENSFALG00000023160)	ENSFALG00000013128	ENSFALG00000013143	ENSFALG00000026671 #22	HUS1 (ENSFALG00000013176)	TNS3 (ENSFALG00000013179)	ENSFALG00000028134	ENSFALG00000013184	IGFBP1 (ENSFALG00000013189)	ADCY1 (ENSFALG00000013204)	RAMP3 (ENSFALG00000013222)	ENSFALG00000013224	SLC9A3 (ENSFALG00000013226)	TPPP (ENSFALG00000024481)	ENSFALG00000024175	BRD9 (ENSFALG00000013234)	TRIP13 (ENSFALG00000013242)	ENSFALG00000013256	ENSFALG00000013285
Neognathae_c	ANCESTRAL SPECIES	1	ENSGT00940000162740.f.a	ENSGT00940000162740.f.b	ENSGT00940000162740.e	ENSGT00390000011362	ENSGT00530000063631.a	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT00390000017432	ENSGT00950000183170.b.a	ENSGT00940000153875.c	ENSGT00940000158616	ENSGT01030000234531.C	ENSGT00940000157657	ENSGT00940000156325	ENSGT00950000183199.b #22	ENSGT00390000000706	ENSGT00940000156328.b	ENSGT00940000158092	ENSGT00940000157394	ENSGT00940000154872.C	ENSGT00940000161026	ENSGT00940000157738	ENSGT00940000155013	ENSGT00940000154774	ENSGT00940000154516.b	ENSGT00390000016016.A	ENSGT00390000001319	ENSGT00940000155450	ENSGT01040000241072	ENSGT00530000063186.b.a
Golden eagle	MODERN SPECIES	9	ENSACCG00020011964	RBFA (ENSACCG00020011987)	ADNP2 (ENSACCG00020012003)	RECK (ENSACCG00020012029)	ENSACCG00020012067	TGFBR1 (ENSACCG00020012084)	ENSACCG00020012112	ENSACCG00020012183	TRIP13 (ENSACCG00020012230)	BRD9 (ENSACCG00020012343)	TPPP (ENSACCG00020012482)	SLC9A3 (ENSACCG00020012518)	LRRC14B (ENSACCG00020012554)	ENSACCG00020012615	NFX1 (ENSACCG00020012785)	ENSACCG00020012901 #22	HUS1 (ENSACCG00020012940)	TNS3 (ENSACCG00020012993)	IGFBP3 (ENSACCG00020013050)	IGFBP1 (ENSACCG00020013063)	ADCY1 (ENSACCG00020013088)	RAMP3 (ENSACCG00020013106)
Kakapo	MODERN SPECIES		ENSSHBG00005002797	ENSSHBG00005002856	CPNE4 (ENSSHBG00005002917)	MRPL3 (ENSSHBG00005002927)	NEK11 (ENSSHBG00005002944)	ENSSHBG00005002958	ENSSHBG00005002972	LARS2 (ENSSHBG00005003085)	LIMD1 (ENSSHBG00005003457)	SACM1L (ENSSHBG00005003481)	SNRPD1 (ENSSHBG00005003518)	SLC6A20 (ENSSHBG00005003531)	LZTFL1 (ENSSHBG00005003574)	ENSSHBG00005003595	NFX1 (ENSSHBG00005003734)	ENSSHBG00005004278 #22	HUS1 (ENSSHBG00005004285)	TNS3 (ENSSHBG00005004318)	IGFBP3 (ENSSHBG00005004372)	IGFBP1 (ENSSHBG00005004376)	ENSSHBG00005004383	ENSSHBG00005004393	RAMP3 (ENSSHBG00005004397)	PDIA4 (ENSSHBG00005004401)	EZH2 (ENSSHBG00005004420)	CUL1 (ENSSHBG00005004427)	CNTNAP2 (ENSSHBG00005004659)	TPK1 (ENSSHBG00005013825)	ENSSHBG00005013830	SEC61G (ENSSHBG00005013838)	ENSSHBG00005000018
Galloanserae	ANCESTRAL SPECIES		ENSGT00940000162740.f.a	ENSGT00940000162740.f.b	ENSGT00940000162740.e	ENSGT00390000011362	ENSGT00530000063631.a	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT01030000234531.C	ENSGT00940000158616	ENSGT00940000153875.c	ENSGT00950000183170.b.a	ENSGT00390000017432	ENSGT00940000157657	ENSGT00940000156325	ENSGT00950000183199.b #22	ENSGT00390000000706	ENSGT00940000156328.b	ENSGT00940000158092	ENSGT00940000157394	ENSGT00940000154872.C	ENSGT00940000161026	ENSGT00940000157738	ENSGT00940000155013	ENSGT00940000154774	ENSGT00940000154516.b	ENSGT00390000016016.A	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821
Anatidae	ANCESTRAL SPECIES	1	ENSGT00940000158957	ENSGT00730000111020.b.a	ENSGT00390000007302	ENSGT00940000159220	ENSGT00940000156479.a	ENSGT00940000156206	ENSGT00940000156595	ENSGT00390000005939.a.a	ENSGT00940000156245	ENSGT00390000017955.d	ENSGT00390000007346	ENSGT00940000153253.a	ENSGT00390000001263	ENSGT00940000154772.c.b	ENSGT00940000156325	ENSGT00950000183199.b #22	ENSGT00390000000706	ENSGT00940000156328.b	ENSGT00940000158092	ENSGT00940000157394	ENSGT00940000154872.C	ENSGT00940000161026	ENSGT00940000157738	ENSGT00940000155013	ENSGT00940000154774	ENSGT00940000154516.b	ENSGT00390000016016.A	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821
Pink-footed goose	MODERN SPECIES	202													PAK1IP1 (ENSABRG00000013624)	ENSABRG00000013619	NFX1 (ENSABRG00000013561)	ENSABRG00000013533 #22	HUS1 (ENSABRG00000013525)	TNS3 (ENSABRG00000013486)	IGFBP3 (ENSABRG00000013479)	IGFBP1 (ENSABRG00000013476)	ADCY1 (ENSABRG00000013454)
Duck	MODERN SPECIES	10	ENSAPLG00000030801	RNF182 (ENSAPLG00000001505)	CD83 (ENSAPLG00000020318)	JARID2 (ENSAPLG00000004296)	DTNBP1 (ENSAPLG00000013450)	ENSAPLG00000025659	MYLIP (ENSAPLG00000008040)	GMPR (ENSAPLG00000007973)	ATXN1 (ENSAPLG00000029862)	RBM24 (ENSAPLG00000007828)	CAP2 (ENSAPLG00000007343)	FAM8A1 (ENSAPLG00000020765)	PAK1IP1 (ENSAPLG00000005241)	ENSAPLG00000005452	NFX1 (ENSAPLG00000005524)	ENSAPLG00000027178 #22	HUS1 (ENSAPLG00000006454)	TNS3 (ENSAPLG00000006520)	IGFBP3 (ENSAPLG00000016379)	IGFBP1 (ENSAPLG00000025569)	ADCY1 (ENSAPLG00000001037)	RAMP3 (ENSAPLG00000023187)	PDIA4 (ENSAPLG00000010645)	EZH2 (ENSAPLG00000010543)	CUL1 (ENSAPLG00000010478)	CNTNAP2 (ENSAPLG00000010463)	ENSAPLG00000022224	ENSAPLG00000017666	TPK1 (ENSAPLG00000002852)	ENSAPLG00000021755	SEC61G (ENSAPLG00000002944)
Phasianidae	ANCESTRAL SPECIES	1	ENSGT00940000162740.f.a	ENSGT00940000162740.f.b	ENSGT00940000162740.e	ENSGT00390000011362	ENSGT00530000063631.a	ENSGT00390000018540	ENSGT00940000156394	ENSGT00940000158302.e	ENSGT01030000234531.C	ENSGT00940000158616	ENSGT00940000153875.c	ENSGT00950000183170.b.a	ENSGT00390000017432	ENSGT00940000157657	ENSGT00940000156325	ENSGT00950000183199.b #22	ENSGT00390000000706	ENSGT00940000156328.b	ENSGT00940000158092	ENSGT00940000157394	ENSGT00940000154872.C	ENSGT00940000161026	ENSGT00940000157738	ENSGT00940000155013	ENSGT00940000154774	ENSGT00940000154516.b	ENSGT00390000016016.A	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821
Japanese quail	DUPLICATION
Japanese quail	MODERN SPECIES	11	ENSCJPG00005017997	ENSCJPG00005017998	RBFA (ENSCJPG00005017999)	ADNP2 (ENSCJPG00005018000)	RECK (ENSCJPG00005018001)	TGFBR1 (ENSCJPG00005018020)	ENSCJPG00005018021	LRRC14B (ENSCJPG00005018023)	SLC9A3 (ENSCJPG00005018024)	TPPP (ENSCJPG00005018028)	BRD9 (ENSCJPG00005018029)	TRIP13 (ENSCJPG00005018033)	SLC12A7 (ENSCJPG00005018048)	NFX1 (ENSCJPG00005018637)	ENSCJPG00005018728 #22	ENSCJPG00005018729 #22	HUS1 (ENSCJPG00005018730)	TNS3 (ENSCJPG00005018731)	IGFBP3 (ENSCJPG00005019177)	IGFBP1 (ENSCJPG00005019178)	ADCY1 (ENSCJPG00005000050)	ENSCJPG00005000104	ENSCJPG00005000137	SEC61G (ENSCJPG00005000142)	EGFR (ENSCJPG00005000163)	LANCL2 (ENSCJPG00005000198)	VOPP1 (ENSCJPG00005000210)	BLVRA (ENSCJPG00005000222)	ENSCJPG00005000233	STK17A (ENSCJPG00005000239)	HECW1 (ENSCJPG00005000252)
Japanese quail	MODERN SPECIES	11	ENSCJPG00005017995	ENSCJPG00005017997	ENSCJPG00005017998	RBFA (ENSCJPG00005017999)	ADNP2 (ENSCJPG00005018000)	RECK (ENSCJPG00005018001)	TGFBR1 (ENSCJPG00005018020)	ENSCJPG00005018021	LRRC14B (ENSCJPG00005018023)	SLC9A3 (ENSCJPG00005018024)	TPPP (ENSCJPG00005018028)	BRD9 (ENSCJPG00005018029)	TRIP13 (ENSCJPG00005018033)	SLC12A7 (ENSCJPG00005018048)	NFX1 (ENSCJPG00005018637)	ENSCJPG00005018728 #22	ENSCJPG00005018729 #22	HUS1 (ENSCJPG00005018730)	TNS3 (ENSCJPG00005018731)	IGFBP3 (ENSCJPG00005019177)	IGFBP1 (ENSCJPG00005019178)	ADCY1 (ENSCJPG00005000050)	ENSCJPG00005000104	ENSCJPG00005000137	SEC61G (ENSCJPG00005000142)	EGFR (ENSCJPG00005000163)	LANCL2 (ENSCJPG00005000198)	VOPP1 (ENSCJPG00005000210)	BLVRA (ENSCJPG00005000222)	ENSCJPG00005000233	STK17A (ENSCJPG00005000239)
Phasianidae_b	ANCESTRAL SPECIES	1	ENSGT00390000010779.a.b.a	ENSGT00940000162740.f.a	ENSGT00940000162740.f.b	ENSGT00940000162740.e	ENSGT00390000011362	ENSGT00530000063631.a	ENSGT00390000018540	ENSGT00940000156394	ENSGT01030000234531.C	ENSGT00940000158616	ENSGT00940000153875.c	ENSGT00950000183170.b.a	ENSGT00390000017432	ENSGT00940000157657	ENSGT00940000156325	ENSGT00950000183199.b #22	ENSGT00390000000706	ENSGT00940000156328.b	ENSGT00940000158092	ENSGT00940000157394	ENSGT00940000154872.C	ENSGT00940000161026	ENSGT00940000157738	ENSGT00940000155013	ENSGT00940000154774	ENSGT00940000154516.b	ENSGT00390000016016.A	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821
Turkey	DUPLICATION
Turkey	MODERN SPECIES	22													ENSMGAG00000001054	ENSMGAG00000022268	ENSMGAG00000001256	ENSMGAG00000020769 #22	ENSMGAG00000001202	ENSMGAG00000022584 #22	ENSMGAG00000001538	PDIA4 (ENSMGAG00000001335)	EZH2 (ENSMGAG00000001370)	CUL1 (ENSMGAG00000001436)	CNTNAP2 (ENSMGAG00000001546)	TPK1 (ENSMGAG00000001560)	ENSMGAG00000001792	ENSMGAG00000017931	SLC12A7 (ENSMGAG00000001576)	TRIP13 (ENSMGAG00000001806)	BRD9 (ENSMGAG00000001853)	TPPP (ENSMGAG00000001895)	ENSMGAG00000001943
Turkey	MODERN SPECIES	22											ENSMGAG00000001054	ENSMGAG00000022268	ENSMGAG00000001256	ENSMGAG00000020769 #22	ENSMGAG00000001202	ENSMGAG00000022584 #22	ENSMGAG00000001538	PDIA4 (ENSMGAG00000001335)	EZH2 (ENSMGAG00000001370)	CUL1 (ENSMGAG00000001436)	CNTNAP2 (ENSMGAG00000001546)	TPK1 (ENSMGAG00000001560)	ENSMGAG00000001792	ENSMGAG00000017931	SLC12A7 (ENSMGAG00000001576)	TRIP13 (ENSMGAG00000001806)	BRD9 (ENSMGAG00000001853)	TPPP (ENSMGAG00000001895)	ENSMGAG00000001943	ENSMGAG00000001949	ENSMGAG00000002050
Chicken	MODERN SPECIES	11	ENSGALG00010008097	ENSGALG00010008091	ENSGALG00010008018	RBFA (ENSGALG00010008052)	ADNP2 (ENSGALG00010008011)	RECK (ENSGALG00010007982)	TGFBR1 (ENSGALG00010007951)	ENSGALG00010007936	LRRC14B (ENSGALG00010007929)	SLC9A3 (ENSGALG00010007655)	TPPP (ENSGALG00010007624)	BRD9 (ENSGALG00010007580)	TRIP13 (ENSGALG00010007567)	SLC12A7 (ENSGALG00010007521)	NFX1 (ENSGALG00010007479)	ENSGALG00010007118 #22	HUS1 (ENSGALG00010006912)	ENSGALG00010008452	TNS3 (ENSGALG00010008448)	IGFBP3 (ENSGALG00010008429)	IGFBP1 (ENSGALG00010008417)	ADCY1 (ENSGALG00010008388)	RAMP3 (ENSGALG00010008362)	PDIA4 (ENSGALG00010008340)	EZH2 (ENSGALG00010008330)	CUL1 (ENSGALG00010008300)	ENSGALG00010008281	ENSGALG00010008269	CNTNAP2 (ENSGALG00010008264)	ENSGALG00010008256	ENSGALG00010008253
African ostrich	MODERN SPECIES	281												PLEKHG4B (ENSSCUG00000006312)	LRRC14B (ENSSCUG00000006316)	ENSSCUG00000006358	NFX1 (ENSSCUG00000006429)	ICE1 (ENSSCUG00000006476) #22	MED10 (ENSSCUG00000006484) #23	UBE2QL1 (ENSSCUG00000006485) #25	NSUN2 (ENSSCUG00000006496) #26	SRD5A1 (ENSSCUG00000006504) #27	TENT4A (ENSSCUG00000006506) #28	ADCY2 (ENSSCUG00000000320) #32	CFAP90 (ENSSCUG00000000340) #34	FASTKD3 (ENSSCUG00000000343) #35	MTRR (ENSSCUG00000000347) #36	SEMA5A (ENSSCUG00000000357) #37	ATPSCKMT (ENSSCUG00000000370)	CCT5 (ENSSCUG00000000372)	ENSSCUG00000000381	ENSSCUG00000000387	MARCHF6 (ENSSCUG00000000393)
Anura	ANCESTRAL SPECIES	463																ENSGT00950000183199.b #22	ENSGT00940000157173	ENSGT00940000163607
Leishan spiny toad	MODERN SPECIES	8	ENSLLEG00000018329	ENSLLEG00000018396	ADAMTS16 (ENSLLEG00000018466) #21	ENSLLEG00000019170	ENSLLEG00000019189	ENSLLEG00000019214	ENSLLEG00000019264	ENSLLEG00000019756	EXOC3 (ENSLLEG00000019995)	ANKS6 (ENSLLEG00000020112)	PDCD6 (ENSLLEG00000020241)	ENSLLEG00000020304	PIGM (ENSLLEG00000020327)	ENSLLEG00000020388	CRTAP (ENSLLEG00000020422)	ENSLLEG00000020580 #22	GALNT12 (ENSLLEG00000020928)	ENSLLEG00000021079	ENSLLEG00000021270	ENSLLEG00000021294	ENSLLEG00000021366	ENSLLEG00000021386	PDE1C (ENSLLEG00000021436)	ENSLLEG00000022109	ENSLLEG00000022145	ENSLLEG00000022207	ENSLLEG00000022233	ENSLLEG00000022338	ENSLLEG00000022352	ENSLLEG00000022370	ENSLLEG00000022398
Frog	MODERN SPECIES	6	ENSXETG00000043416	ENSXETG00000043092	MRPL36 (ENSXETG00000040435) #13	ndufs6 (ENSXETG00000008889) #14	irx4 (ENSXETG00000008892) #15	irx2 (ENSXETG00000012653) #16	ENSXETG00000047167	irx1 (ENSXETG00000006958) #19	ENSXETG00000043083	ENSXETG00000043926	ENSXETG00000046413	adamts16 (ENSXETG00000019022) #21	ENSXETG00000040484	ENSXETG00000046469	exoc3 (ENSXETG00000006195)	ice1 (ENSXETG00000037852) #22	galnt12 (ENSXETG00000027025)	galnt4 (ENSXETG00000006191)	anks6 (ENSXETG00000006189)	ENSXETG00000046001	pdcd6 (ENSXETG00000027021)	pigm (ENSXETG00000006188)	ahrr (ENSXETG00000006186)	znfx1.2 (ENSXETG00000003560)	ENSXETG00000025628	cmbl (ENSXETG00000025629)	marchf6 (ENSXETG00000003553)	ropn1l (ENSXETG00000003552)	ENSXETG00000042529	ankrd33b (ENSXETG00000038702)	dap (ENSXETG00000025633)
Coelacanth	MODERN SPECIES	948													ENSLACG00000003061	ENSLACG00000008777	ENSLACG00000008868	ENSLACG00000009652 #22	ENSLACG00000010569	ENSLACG00000010596	MED10 (ENSLACG00000011409) #23	ENSLACG00000012908	ENSLACG00000012985	ENSLACG00000013379