Eutheria ANCESTRAL SPECIES 20 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00390000010779.a.b.a ##25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 Boreoeutheria ANCESTRAL SPECIES 22 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 Euarchontoglires ANCESTRAL SPECIES 22 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 Euarchontoglires_A ANCESTRAL SPECIES 22 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 Glires ANCESTRAL SPECIES 23 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 Rodentia ANCESTRAL SPECIES 23 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT01030000234871 Rodentia_B ANCESTRAL SPECIES 27 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT01030000234871 ENSGT00940000160839 Myomorpha ANCESTRAL SPECIES 35 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT01030000234871 ENSGT00940000160839 Muroidea ANCESTRAL SPECIES 73 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT01030000234871 ENSGT00940000160839 Upper Galilee mountains blind mole rat MODERN SPECIES 1480 Pard6g (ENSNGAG00000010459) #22 Adnp2 (ENSNGAG00000010772) #23 Rbfa (ENSNGAG00000011739) #24 Txnl4a (ENSNGAG00000014365) #25 ENSNGAG00000015849 #26 Muroidea_A ANCESTRAL SPECIES 18 ENSGT00940000155805 ENSGT00940000157302 ENSGT01030000234539.a.a.b.b ENSGT01030000234535.C ENSGT00390000018830 ENSGT00940000156997 ENSGT00390000016167 ENSGT00390000006029 ENSGT00550000074846 ENSGT00940000158788 ENSGT00390000007354 ENSGT01080000257333.E.o.a ENSGT00390000018729.a.a ENSGT00390000018729.a.b ENSGT00940000158784 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT01030000234871 ENSGT00940000160839 Cricetidae ANCESTRAL SPECIES 18 ENSGT00940000155805 ENSGT00940000157302 ENSGT01030000234539.a.a.b.b ENSGT01030000234535.C ENSGT00390000018830 ENSGT00940000156997 ENSGT00390000016167 ENSGT00390000006029 ENSGT00550000074846.u ENSGT00940000158788 ENSGT00390000007354 ENSGT01080000257333.E.o.a ENSGT00390000018729.a.a.e ENSGT00390000018729.a.b ENSGT00940000158784 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT01030000234871 ENSGT00940000160839 Cricetinae ANCESTRAL SPECIES 14 ENSGT00930000151022.d ENSGT00950000182863.B.a ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 ENSGT00900000143828 Chinese hamster chok1gshd MODERN SPECIES 92 ENSCGRG00001019910 ENSCGRG00001021932 Colec12 (ENSCGRG00001022701) Thoc1 (ENSCGRG00001016464) Usp14 (ENSCGRG00001006324) Rock1 (ENSCGRG00001014749) Tmx3 (ENSCGRG00001021522) Sntg1 (ENSCGRG00001014187) ENSCGRG00001013632 ENSCGRG00001015031 ENSCGRG00001016310 Pard6g (ENSCGRG00001018816) #22 Adnp2 (ENSCGRG00001021111) #23 Rbfa (ENSCGRG00001022798) #24 ENSCGRG00001014779 #25 Hsbp1l1 (ENSCGRG00001020550) Slc66a2 (ENSCGRG00001024278) Kcng2 (ENSCGRG00001009283) Ctdp1 (ENSCGRG00001020255) ENSCGRG00001000659 Nfatc1 (ENSCGRG00001007565) Atp9b (ENSCGRG00001016871) Sall3 (ENSCGRG00001018203) Galr1 (ENSCGRG00001023113) Mbp (ENSCGRG00001015943) Zfp236 (ENSCGRG00001012398) Zfp516 (ENSCGRG00001014360) Golden Hamster MODERN SPECIES 619 Nkd2 (ENSMAUG00000011293) Trip13 (ENSMAUG00000018209) Brd9 (ENSMAUG00000015050) Cep72 (ENSMAUG00000004918) Slc9a3 (ENSMAUG00000020856) Exoc3 (ENSMAUG00000021411) Ahrr (ENSMAUG00000017965) ENSMAUG00000008435 Sdha (ENSMAUG00000020809) Ccdc127 (ENSMAUG00000019954) Lrrc14b (ENSMAUG00000013534) Zfp72 (ENSMAUG00000020123) Tmx3 (ENSMAUG00000020916) ENSMAUG00000005436 Sntg1 (ENSMAUG00000018471) Pard6g (ENSMAUG00000009540) #22 Adnp2 (ENSMAUG00000012119) #23 Rbfa (ENSMAUG00000010060) #24 Txnl4a (ENSMAUG00000021849) #25 Hsbp1l1 (ENSMAUG00000007227) Slc66a2 (ENSMAUG00000019704) Ctdp1 (ENSMAUG00000015399) Nfatc1 (ENSMAUG00000013597) ENSMAUG00000015980 Sall3 (ENSMAUG00000011828) Galr1 (ENSMAUG00000009153) ENSMAUG00000000901 ENSMAUG00000015835 ENSMAUG00000002017 Zfp516 (ENSMAUG00000008561) Tshz1 (ENSMAUG00000022081) Cricetidae_B ANCESTRAL SPECIES 15 ENSGT00940000155805 ENSGT00940000157302 ENSGT01030000234539.a.a.b.b ENSGT01030000234535.C ENSGT00390000018830 ENSGT00940000156997 ENSGT00390000016167 ENSGT00390000006029 ENSGT00550000074846.u ENSGT00940000158788 ENSGT00390000007354 ENSGT01080000257333.E.o.a ENSGT00390000018729.a.a.e ENSGT00390000018729.a.b ENSGT00940000158784 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT01030000234871 ENSGT00940000160839 Northern American deer mouse MODERN SPECIES 10 Pias2 (ENSPEMG00000022220) St8sia5 (ENSPEMG00000022119) Loxhd1 (ENSPEMG00000022919) ENSPEMG00000029031 8030462N17Rik (ENSPEMG00000010341) Haus1 (ENSPEMG00000021388) Atp5a1 (ENSPEMG00000022004) Pstpip2 (ENSPEMG00000022379) Epg5 (ENSPEMG00000022153) Siglec15 (ENSPEMG00000024146) ENSPEMG00000028869 Slc14a1 (ENSPEMG00000008835) ENSPEMG00000022112 Setbp1 (ENSPEMG00000021869) ENSPEMG00000006471 Pard6g (ENSPEMG00000025457) #22 Adnp2 (ENSPEMG00000023970) #23 Rbfa (ENSPEMG00000021588) #24 Txnl4a (ENSPEMG00000021776) #25 Hsbp1l1 (ENSPEMG00000028002) Slc66a2 (ENSPEMG00000021424) Kcng2 (ENSPEMG00000026971) Ctdp1 (ENSPEMG00000022491) Nfatc1 (ENSPEMG00000022364) Atp9b (ENSPEMG00000023034) ENSPEMG00000005583 Sall3 (ENSPEMG00000022799) Galr1 (ENSPEMG00000022914) Mbp (ENSPEMG00000021451) Zfp236 (ENSPEMG00000026320) ENSPEMG00000024427 Prairie vole MODERN SPECIES 5 Hdhd2 (ENSMOCG00000008063) Katnal2 (ENSMOCG00000011716) Pias2 (ENSMOCG00000015605) St8sia5 (ENSMOCG00000011361) Loxhd1 (ENSMOCG00000016732) ENSMOCG00000019837 8030462N17Rik (ENSMOCG00000000844) Haus1 (ENSMOCG00000011366) Atp5a1 (ENSMOCG00000009175) Pstpip2 (ENSMOCG00000006361) Epg5 (ENSMOCG00000015567) Siglec15 (ENSMOCG00000007709) ENSMOCG00000002421 Slc14a2 (ENSMOCG00000013965) Setbp1 (ENSMOCG00000021557) Pard6g (ENSMOCG00000019881) #22 ENSMOCG00000019582 #23 Rbfa (ENSMOCG00000018963) #24 Txnl4a (ENSMOCG00000012922) #25 Hsbp1l1 (ENSMOCG00000000864) Slc66a2 (ENSMOCG00000005974) Kcng2 (ENSMOCG00000011974) Ctdp1 (ENSMOCG00000017315) Nfatc1 (ENSMOCG00000017415) Atp9b (ENSMOCG00000015627) Sall3 (ENSMOCG00000013205) Galr1 (ENSMOCG00000018111) Mbp (ENSMOCG00000013318) Zfp236 (ENSMOCG00000022870) Zfp516 (ENSMOCG00000021872) ENSMOCG00000016186 Murinae ANCESTRAL SPECIES 17 ENSGT00940000155805 ENSGT00940000157302 ENSGT01030000234539.a.a.b.b ENSGT01030000234535.C ENSGT00390000018830 ENSGT00940000156997 ENSGT00390000016167 ENSGT00390000006029 ENSGT00550000074846 ENSGT00940000158788 ENSGT00390000007354 ENSGT01080000257333.E.o.a ENSGT00390000018729.a.a ENSGT00390000018729.a.b ENSGT00940000158784 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 ENSGT00950000183051.a.a Mus ANCESTRAL SPECIES 19 ENSGT00940000155805 ENSGT00940000157302 ENSGT01030000234539.a.a.b.b ENSGT01030000234535.C ENSGT00390000018830 ENSGT00940000156997 ENSGT00390000016167 ENSGT00390000006029 ENSGT00550000074846 ENSGT00940000158788 ENSGT00390000007354 ENSGT01080000257333.E.o.a ENSGT00390000018729.a.a ENSGT00390000018729.a.b ENSGT00940000158784 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00940000164242.b ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 Mus_A ANCESTRAL SPECIES 19 ENSGT00940000155805 ENSGT00940000157302 ENSGT01030000234539.a.a.b.b ENSGT01030000234535.C ENSGT00390000018830 ENSGT00940000156997 ENSGT00390000016167 ENSGT00390000006029 ENSGT00550000074846 ENSGT00940000158788 ENSGT00390000007354 ENSGT01080000257333.E.o.a ENSGT00390000018729.a.a ENSGT00390000018729.a.b ENSGT00940000158784 ENSGT00950000183211.a.b #22 ENSGT01100000265037 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00940000164242.b ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 Mus_B ANCESTRAL SPECIES 19 ENSGT00940000157302 ENSGT01030000234539.a.a.b.b ENSGT01030000234535.C ENSGT00390000018830 ENSGT00940000156997 ENSGT00390000016167 ENSGT00390000006029 ENSGT00550000074846 ENSGT00940000158788 ENSGT00390000007354 ENSGT01080000257333.E.o.a ENSGT00390000018729.a.a ENSGT00390000018729.a.b ENSGT00950000183010.a.b.a.a.a.a.a.b.l.d ENSGT00940000158784 ENSGT00950000183211.a.b #22 ENSGT01100000265037 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00940000164242.b ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 Mouse MODERN SPECIES 9 Katnal2 (ENSMUSG00000025420) Pias2 (ENSMUSG00000025423) St8sia5 (ENSMUSG00000025425) Loxhd1 (ENSMUSG00000032818) Rnf165 (ENSMUSG00000025427) 8030462N17Rik (ENSMUSG00000047466) Haus1 (ENSMUSG00000041840) Atp5a1 (ENSMUSG00000025428) Pstpip2 (ENSMUSG00000025429) Epg5 (ENSMUSG00000039840) Siglec15 (ENSMUSG00000091055) Slc14a1 (ENSMUSG00000059336) Slc14a2 (ENSMUSG00000024552) Gm6133 (ENSMUSG00000090451) Setbp1 (ENSMUSG00000024548) Pard6g (ENSMUSG00000056214) #22 Adnp2 (ENSMUSG00000053950) #23 Rbfa (ENSMUSG00000024570) #24 Naa12 (ENSMUSG00000024571) Txnl4a (ENSMUSG00000057130) #25 Hsbp1l1 (ENSMUSG00000078963) Slc66a2 (ENSMUSG00000034006) Kcng2 (ENSMUSG00000059852) Ctdp1 (ENSMUSG00000033323) Nfatc1 (ENSMUSG00000033016) Atp9b (ENSMUSG00000024566) Sall3 (ENSMUSG00000024565) Galr1 (ENSMUSG00000024553) Mbp (ENSMUSG00000041607) Zfp236 (ENSMUSG00000041258) Zfp516 (ENSMUSG00000058881) Mus_C ANCESTRAL SPECIES 16 ENSGT00940000157302 ENSGT01030000234539.a.a.b.b ENSGT01030000234535.C ENSGT00390000018830 ENSGT00940000156997 ENSGT00390000016167 ENSGT00390000006029 ENSGT00550000074846 ENSGT00940000158788 ENSGT00390000007354 ENSGT01080000257333.E.o.a ENSGT00390000018729.a.a ENSGT00390000018729.a.b ENSGT00950000183010.a.b.a.a.a.a.a.b.l.d ENSGT00940000158784 ENSGT00950000183211.a.b #22 ENSGT01100000265037 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00940000164242.b ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 spretus MODERN SPECIES 9 MGP_SPRETEiJ_G0023329 St8sia5 (MGP_SPRETEiJ_G0023330) Loxhd1 (MGP_SPRETEiJ_G0023331) 8030462N17Rik (MGP_SPRETEiJ_G0023333) Haus1 (MGP_SPRETEiJ_G0023334) Atp5a1 (MGP_SPRETEiJ_G0023335) Pstpip2 (MGP_SPRETEiJ_G0023336) Epg5 (MGP_SPRETEiJ_G0023337) Siglec15 (MGP_SPRETEiJ_G0023338) Slc14a1 (MGP_SPRETEiJ_G0023339) Slc14a2 (MGP_SPRETEiJ_G0023340) MGP_SPRETEiJ_G0023341 Setbp1 (MGP_SPRETEiJ_G0023342) Eola1 (MGP_SPRETEiJ_G0023343) MGP_SPRETEiJ_G0023344 Pard6g (MGP_SPRETEiJ_G0023345) #22 MGP_SPRETEiJ_G0023346 Adnp2 (MGP_SPRETEiJ_G0023347) #23 Rbfa (MGP_SPRETEiJ_G0023348) #24 Naa12 (MGP_SPRETEiJ_G0023349) Txnl4a (MGP_SPRETEiJ_G0023350) #25 Hsbp1l1 (MGP_SPRETEiJ_G0023351) Slc66a2 (MGP_SPRETEiJ_G0023352) Kcng2 (MGP_SPRETEiJ_G0023353) Ctdp1 (MGP_SPRETEiJ_G0023354) Nfatc1 (MGP_SPRETEiJ_G0023355) Atp9b (MGP_SPRETEiJ_G0023356) Sall3 (MGP_SPRETEiJ_G0023357) Galr1 (MGP_SPRETEiJ_G0023358) Mbp (MGP_SPRETEiJ_G0023359) Zfp236 (MGP_SPRETEiJ_G0023360) Steppe mouse MODERN SPECIES 64 ENSMSIG00000002891 ENSMSIG00000002881 ENSMSIG00000002865 Pard6g (ENSMSIG00000002841) #22 Adnp2 (ENSMSIG00000002781) #23 ENSMSIG00000002754 Rbfa (ENSMSIG00000002719) #24 ENSMSIG00000002695 #25 Hsbp1l1 (ENSMSIG00000002676) Slc66a2 (ENSMSIG00000002545) Kcng2 (ENSMSIG00000002489) Ctdp1 (ENSMSIG00000002354) Nfatc1 (ENSMSIG00000002064) Atp9b (ENSMSIG00000001806) Sall3 (ENSMSIG00000001765) ENSMSIG00000001753 Galr1 (ENSMSIG00000001741) ENSMSIG00000001453 Zfp236 (ENSMSIG00000001177) Ryukyu mouse MODERN SPECIES 9 Pias2 (MGP_CAROLIEiJ_G0022415) MGP_CAROLIEiJ_G0022416 St8sia5 (MGP_CAROLIEiJ_G0022417) Loxhd1 (MGP_CAROLIEiJ_G0022418) Rnf165 (MGP_CAROLIEiJ_G0022419) 8030462N17Rik (MGP_CAROLIEiJ_G0022420) Haus1 (MGP_CAROLIEiJ_G0022421) Atp5a1 (MGP_CAROLIEiJ_G0022422) Pstpip2 (MGP_CAROLIEiJ_G0022423) MGP_CAROLIEiJ_G0022424 Siglec15 (MGP_CAROLIEiJ_G0022425) Slc14a1 (MGP_CAROLIEiJ_G0022426) Slc14a2 (MGP_CAROLIEiJ_G0022427) MGP_CAROLIEiJ_G0022428 Setbp1 (MGP_CAROLIEiJ_G0022429) Pard6g (MGP_CAROLIEiJ_G0022430) #22 MGP_CAROLIEiJ_G0022431 Adnp2 (MGP_CAROLIEiJ_G0022432) #23 Rbfa (MGP_CAROLIEiJ_G0022433) #24 Naa12 (MGP_CAROLIEiJ_G0022434) Txnl4a (MGP_CAROLIEiJ_G0022435) #25 Hsbp1l1 (MGP_CAROLIEiJ_G0022436) Slc66a2 (MGP_CAROLIEiJ_G0022437) Kcng2 (MGP_CAROLIEiJ_G0022438) Ctdp1 (MGP_CAROLIEiJ_G0022439) Nfatc1 (MGP_CAROLIEiJ_G0022440) Atp9b (MGP_CAROLIEiJ_G0022441) Sall3 (MGP_CAROLIEiJ_G0022442) Galr1 (MGP_CAROLIEiJ_G0022443) Mbp (MGP_CAROLIEiJ_G0022444) Zfp236 (MGP_CAROLIEiJ_G0022445) Shrew mouse MODERN SPECIES 6 Pias2 (MGP_PahariEiJ_G0019144) MGP_PahariEiJ_G0019145 St8sia5 (MGP_PahariEiJ_G0019146) MGP_PahariEiJ_G0019147 Rnf165 (MGP_PahariEiJ_G0019148) 8030462N17Rik (MGP_PahariEiJ_G0019149) Haus1 (MGP_PahariEiJ_G0019150) Atp5a1 (MGP_PahariEiJ_G0019151) Pstpip2 (MGP_PahariEiJ_G0019152) Epg5 (MGP_PahariEiJ_G0019153) Siglec15 (MGP_PahariEiJ_G0019154) Slc14a1 (MGP_PahariEiJ_G0019155) Slc14a2 (MGP_PahariEiJ_G0019156) MGP_PahariEiJ_G0019157 Setbp1 (MGP_PahariEiJ_G0019158) Pard6g (MGP_PahariEiJ_G0019159) #22 Adnp2 (MGP_PahariEiJ_G0019160) #23 Rbfa (MGP_PahariEiJ_G0019161) #24 Naa12 (MGP_PahariEiJ_G0019162) Txnl4a (MGP_PahariEiJ_G0019163) #25 Hsbp1l1 (MGP_PahariEiJ_G0019164) Slc66a2 (MGP_PahariEiJ_G0019165) Kcng2 (MGP_PahariEiJ_G0019166) Ctdp1 (MGP_PahariEiJ_G0019167) Nfatc1 (MGP_PahariEiJ_G0019168) Atp9b (MGP_PahariEiJ_G0019169) Sall3 (MGP_PahariEiJ_G0019170) Galr1 (MGP_PahariEiJ_G0019171) Mbp (MGP_PahariEiJ_G0019172) Zfp236 (MGP_PahariEiJ_G0019173) Zfp516 (MGP_PahariEiJ_G0019174) Rat MODERN SPECIES 9 Pias2 (ENSRNOG00000017493) St8sia5 (ENSRNOG00000022691) Loxhd1 (ENSRNOG00000017410) Rnf165 (ENSRNOG00000048824) RGD1308601 (ENSRNOG00000017215) ENSRNOG00000063575 Haus1 (ENSRNOG00000017067) Atp5f1a (ENSRNOG00000017032) Pstpip2 (ENSRNOG00000016987) Epg5 (ENSRNOG00000052894) Siglec15 (ENSRNOG00000033588) Slc14a1 (ENSRNOG00000016753) Slc14a2 (ENSRNOG00000061714) Setbp1 (ENSRNOG00000016208) ENSRNOG00000065450 Pard6g (ENSRNOG00000055157) #22 Adnp2 (ENSRNOG00000053370) #23 Rbfa (ENSRNOG00000055647) #24 RGD1560212 (ENSRNOG00000057774) Hsbp1l1 (ENSRNOG00000059055) Slc66a2 (ENSRNOG00000059215) Kcng2 (ENSRNOG00000053640) Ctdp1 (ENSRNOG00000061474) Nfatc1 (ENSRNOG00000017146) Atp9b (ENSRNOG00000032039) Sall3 (ENSRNOG00000026116) Galr1 (ENSRNOG00000016654) Mbp (ENSRNOG00000016516) Zfp236 (ENSRNOG00000016303) Zfp516 (ENSRNOG00000016258) Tshz1 (ENSRNOG00000016246) Lesser Egyptian jerboa MODERN SPECIES 93 Rabgef1 (ENSJJAG00000012673) Kctd7 (ENSJJAG00000014065) Tpst1 (ENSJJAG00000014389) Crcp (ENSJJAG00000016893) Asl (ENSJJAG00000020510) Gusb (ENSJJAG00000023148) Vkorc1l1 (ENSJJAG00000023632) Chchd2 (ENSJJAG00000019299) Phkg1 (ENSJJAG00000010501) Sumf2 (ENSJJAG00000010817) ENSJJAG00000012759 Psph (ENSJJAG00000013953) ENSJJAG00000014168 Septin14 (ENSJJAG00000014604) ENSJJAG00000016888 ENSJJAG00000017031 #22 Adnp2 (ENSJJAG00000017383) #23 Rbfa (ENSJJAG00000014093) #24 Txnl4a (ENSJJAG00000016836) #25 Hsbp1l1 (ENSJJAG00000016955) Slc66a2 (ENSJJAG00000017949) Kcng2 (ENSJJAG00000019923) Ctdp1 (ENSJJAG00000010330) Nfatc1 (ENSJJAG00000004285) Atp9b (ENSJJAG00000012553) Sall3 (ENSJJAG00000014351) Galr1 (ENSJJAG00000014911) ENSJJAG00000016019 Zfp236 (ENSJJAG00000017493) Smchd1 (ENSJJAG00000003619) Emilin2 (ENSJJAG00000012081) Kangaroo rat MODERN SPECIES 410 Pard6g (ENSDORG00000014780) #22 Adnp2 (ENSDORG00000023278) #23 ENSDORG00000024699 #25 Slc66a2 (ENSDORG00000011994) Ctdp1 (ENSDORG00000013560) Nfatc1 (ENSDORG00000028944) Atp9b (ENSDORG00000002559) Sall3 (ENSDORG00000002702) Galr1 (ENSDORG00000028616) ENSDORG00000025113 Zfp236 (ENSDORG00000010273) ENSDORG00000000351 Zadh2 (ENSDORG00000008344) ENSDORG00000030046 ENSDORG00000027679 Cndp1 (ENSDORG00000009688) Rodentia_A ANCESTRAL SPECIES 23 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 Hystricomorpha ANCESTRAL SPECIES 32 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a.h #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 ENSGT00950000183051.a.a Naked mole-rat female MODERN SPECIES 30 ENSHGLG00000044284 ENSHGLG00000033332 ENSHGLG00000008507 ENSHGLG00000048640 ENSHGLG00000049420 PMS1 (ENSHGLG00000037505) ENSHGLG00000019772 ENSHGLG00000002523 ENSHGLG00000042502 ENSHGLG00000049973 ENSHGLG00000019493 ENSHGLG00000047695 ENSHGLG00000039573 ENSHGLG00000011573 ENSHGLG00000012521 ENSHGLG00000046512 #22 ADNP2 (ENSHGLG00000033188) #23 ENSHGLG00000042552 ENSHGLG00000032332 ENSHGLG00000038675 #25 ENSHGLG00000037787 #25 ENSHGLG00000034431 ENSHGLG00000035275 ENSHGLG00000038818 ENSHGLG00000036820 ENSHGLG00000003620 ENSHGLG00000038559 ENSHGLG00000050969 ENSHGLG00000013763 S100A4 (ENSHGLG00000016459) S100A3 (ENSHGLG00000033057) Hystricomorpha_a ANCESTRAL SPECIES 26 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a.h #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 ENSGT00950000183051.a.a Guinea pig MODERN SPECIES 105 ENSCPOG00000007537 PARD6G (ENSCPOG00000032338) #22 ADNP2 (ENSCPOG00000035899) #23 RBFA (ENSCPOG00000000170) #24 TXNL4A (ENSCPOG00000035909) #25 HSBP1L1 (ENSCPOG00000032487) SLC66A2 (ENSCPOG00000019883) ENSCPOG00000030362 CTDP1 (ENSCPOG00000002613) NFATC1 (ENSCPOG00000003999) ATP9B (ENSCPOG00000015118) SALL3 (ENSCPOG00000008546) GALR1 (ENSCPOG00000000125) MBP (ENSCPOG00000008430) ZNF236 (ENSCPOG00000008424) ZNF516 (ENSCPOG00000020183) Hystricomorpha_b ANCESTRAL SPECIES 21 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a.h #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 ENSGT00950000183051.a.a Degu MODERN SPECIES 161 PARD6G (ENSODEG00000003334) #22 ADNP2 (ENSODEG00000003303) #23 ENSODEG00000003281 ENSODEG00000003240 TXNL4A (ENSODEG00000003214) #25 ENSODEG00000018937 HSBP1L1 (ENSODEG00000003188) ENSODEG00000003181 KCNG2 (ENSODEG00000003142) CTDP1 (ENSODEG00000003029) ENSODEG00000002960 NFATC1 (ENSODEG00000002866) ATP9B (ENSODEG00000002792) SALL3 (ENSODEG00000002692) GALR1 (ENSODEG00000002674) MBP (ENSODEG00000002651) Long-tailed chinchilla MODERN SPECIES 109 PARD6G (ENSCLAG00000008422) #22 ADNP2 (ENSCLAG00000010511) #23 ENSCLAG00000010655 RBFA (ENSCLAG00000012122) #24 ENSCLAG00000015664 ENSCLAG00000014203 #25 SLC66A2 (ENSCLAG00000008800) KCNG2 (ENSCLAG00000007825) CTDP1 (ENSCLAG00000011662) ENSCLAG00000013642 NFATC1 (ENSCLAG00000009557) ATP9B (ENSCLAG00000010218) SALL3 (ENSCLAG00000007727) GALR1 (ENSCLAG00000013020) MBP (ENSCLAG00000014151) ZNF236 (ENSCLAG00000007793) Sciuridae ANCESTRAL SPECIES 31 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a.j #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 Eurasian red squirrel MODERN SPECIES 4 ENSSVLG00005013235 ENSSVLG00005013166 PARD6G (ENSSVLG00005013068) #22 ADNP2 (ENSSVLG00005013016) #23 ENSSVLG00005012976 RBFA (ENSSVLG00005012924) #24 ENSSVLG00005012855 TXNL4A (ENSSVLG00005012763) #25 HSBP1L1 (ENSSVLG00005012711) SLC66A2 (ENSSVLG00005012630) KCNG2 (ENSSVLG00005012552) CTDP1 (ENSSVLG00005012457) ENSSVLG00005012377 NFATC1 (ENSSVLG00005011217) ENSSVLG00005011078 ATP9B (ENSSVLG00005010928) SALL3 (ENSSVLG00005010810) GALR1 (ENSSVLG00005010721) Marmotini ANCESTRAL SPECIES 31 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a.j #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 Alpin marmot MODERN SPECIES 62 PARD6G (ENSMMMG00000019170) #22 ADNP2 (ENSMMMG00000019166) #23 RBFA (ENSMMMG00000019128) #24 ENSMMMG00000019121 TXNL4A (ENSMMMG00000019114) #25 HSBP1L1 (ENSMMMG00000019110) SLC66A2 (ENSMMMG00000019097) KCNG2 (ENSMMMG00000019094) CTDP1 (ENSMMMG00000019077) ENSMMMG00000019069 NFATC1 (ENSMMMG00000019049) ATP9B (ENSMMMG00000018994) SALL3 (ENSMMMG00000018978) GALR1 (ENSMMMG00000018971) MBP (ENSMMMG00000018899) ZNF236 (ENSMMMG00000018847) Marmotini_b ANCESTRAL SPECIES 147 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a.j #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 Squirrel MODERN SPECIES 216 PARD6G (ENSSTOG00000015088) #22 ADNP2 (ENSSTOG00000025747) #23 RBFA (ENSSTOG00000010308) #24 ENSSTOG00000021487 TXNL4A (ENSSTOG00000022277) #25 HSBP1L1 (ENSSTOG00000029821) SLC66A2 (ENSSTOG00000024050) KCNG2 (ENSSTOG00000027489) CTDP1 (ENSSTOG00000011752) NFATC1 (ENSSTOG00000008168) ATP9B (ENSSTOG00000006826) SALL3 (ENSSTOG00000004145) GALR1 (ENSSTOG00000007064) MBP (ENSSTOG00000007051) ZNF236 (ENSSTOG00000006987) ZNF516 (ENSSTOG00000026569) Arctic ground squirrel MODERN SPECIES 827 ENSUPAG00010001007 #22 ADNP2 (ENSUPAG00010001011) #23 RBFA (ENSUPAG00010001023) #24 ENSUPAG00010001032 TXNL4A (ENSUPAG00010001042) #25 HSBP1L1 (ENSUPAG00010001050) ENSUPAG00010001064 SLC66A2 (ENSUPAG00010001073) KCNG2 (ENSUPAG00010001102) Lagomorpha ANCESTRAL SPECIES ENSGT00950000183211.a.b #22 Pika MODERN SPECIES 5333 ENSOPRG00000016903 #22 Tree shrew MODERN SPECIES 6032 PARD6G (ENSTBEG00000001357) #22 ADNP2 (ENSTBEG00000001298) #23 Primates ANCESTRAL SPECIES 24 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 Strepsirrhini ANCESTRAL SPECIES 22 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 Bushbaby MODERN SPECIES 142 PARD6G (ENSOGAG00000032827) #22 ADNP2 (ENSOGAG00000032513) #23 RBFA (ENSOGAG00000012673) #24 ENSOGAG00000026000 TXNL4A (ENSOGAG00000034753) #25 SLC66A2 (ENSOGAG00000027223) KCNG2 (ENSOGAG00000033887) ENSOGAG00000032618 CTDP1 (ENSOGAG00000026225) ENSOGAG00000027882 NFATC1 (ENSOGAG00000008159) ATP9B (ENSOGAG00000008156) SALL3 (ENSOGAG00000031681) ENSOGAG00000012140 MBP (ENSOGAG00000026007) ZNF236 (ENSOGAG00000027487) Lemuriformes ANCESTRAL SPECIES 98 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a Mouse lemur MODERN SPECIES 10 NETO1 (ENSMICG00000007872) FBXO15 (ENSMICG00000035240) TIMM21 (ENSMICG00000027988) CYB5A (ENSMICG00000003395) C18orf63 (ENSMICG00000041724) CNDP2 (ENSMICG00000012839) DIPK1C (ENSMICG00000027176) CNDP1 (ENSMICG00000015694) ZNF407 (ENSMICG00000034092) PTGR3 (ENSMICG00000047342) TSHZ1 (ENSMICG00000013601) ZNF516 (ENSMICG00000000044) ZNF236 (ENSMICG00000004031) ENSMICG00000026747 MBP (ENSMICG00000004041) PARD6G (ENSMICG00000011267) #22 ADNP2 (ENSMICG00000036153) #23 RBFA (ENSMICG00000011956) #24 ENSMICG00000032888 ENSMICG00000031799 #25 HSBP1L1 (ENSMICG00000028958) SLC66A2 (ENSMICG00000012807) KCNG2 (ENSMICG00000036173) CTDP1 (ENSMICG00000038031) NFATC1 (ENSMICG00000030578) ATP9B (ENSMICG00000017396) SALL3 (ENSMICG00000017395) GALR1 (ENSMICG00000036654) MOCOS (ENSMICG00000006930) ELP2 (ENSMICG00000029486) SLC39A6 (ENSMICG00000029254) Lemuriformes_a ANCESTRAL SPECIES 227 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a Greater bamboo lemur MODERN SPECIES 616 PARD6G (ENSPSMG00000023958) #22 ADNP2 (ENSPSMG00000023954) #23 RBFA (ENSPSMG00000023949) #24 ENSPSMG00000023943 TXNL4A (ENSPSMG00000023939) #25 HSBP1L1 (ENSPSMG00000023926) ENSPSMG00000023925 KCNG2 (ENSPSMG00000023921) CTDP1 (ENSPSMG00000023899) Coquerels sifaka MODERN SPECIES 719 ENSPCOG00000015472 #22 ADNP2 (ENSPCOG00000015078) #23 RBFA (ENSPCOG00000015534) #24 HSBP1L1 (ENSPCOG00000018227) ENSPCOG00000002616 KCNG2 (ENSPCOG00000016974) CTDP1 (ENSPCOG00000001388) NFATC1 (ENSPCOG00000003240) ATP9B (ENSPCOG00000019421) SALL3 (ENSPCOG00000012553) Haplorrhini ANCESTRAL SPECIES 25 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 Tarsier MODERN SPECIES 4068 ENSTSYG00000035989 #22 Simiiformes ANCESTRAL SPECIES 24 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 ENSGT00910000145708 Catarrhini ANCESTRAL SPECIES 23 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 ENSGT00910000145708 Hominoidea ANCESTRAL SPECIES 24 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 ENSGT00940000160839 Hominidae ANCESTRAL SPECIES 24 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 ENSGT00940000160839 Homo/Pan/Gorilla group ANCESTRAL SPECIES 26 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 ENSGT00940000160839 Gorilla MODERN SPECIES 9 PARD6G (ENSGGOG00000042617) #22 ADNP2 (ENSGGOG00000003551) #23 RBFA (ENSGGOG00000003131) #24 TXNL4A (ENSGGOG00000005285) #25 HSBP1L1 (ENSGGOG00000025369) SLC66A2 (ENSGGOG00000005278) ENSGGOG00000005274 CTDP1 (ENSGGOG00000011089) NFATC1 (ENSGGOG00000006879) ATP9B (ENSGGOG00000008135) SALL3 (ENSGGOG00000008127) GALR1 (ENSGGOG00000001342) MBP (ENSGGOG00000009590) ENSGGOG00000036615 ZNF236 (ENSGGOG00000008826) ZNF516 (ENSGGOG00000003996) Homo/Pan group ANCESTRAL SPECIES 25 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 ENSGT00940000160839 Pan ANCESTRAL SPECIES 24 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 ENSGT00940000160839 Chimpanzee MODERN SPECIES 9 PARD6G (ENSPTRG00000010139) #22 ADNP2 (ENSPTRG00000010138) #23 RBFA (ENSPTRG00000010137) #24 TXNL4A (ENSPTRG00000052385) #25 HSBP1L1 (ENSPTRG00000038894) SLC66A2 (ENSPTRG00000010135) KCNG2 (ENSPTRG00000010134) CTDP1 (ENSPTRG00000010133) NFATC1 (ENSPTRG00000010129) ATP9B (ENSPTRG00000010127) SALL3 (ENSPTRG00000010126) GALR1 (ENSPTRG00000010125) MBP (ENSPTRG00000010124) ENSPTRG00000043129 ZNF236 (ENSPTRG00000010123) ZNF516 (ENSPTRG00000010121) Bonobo MODERN SPECIES 9 PARD6G (ENSPPAG00000028051) #22 ADNP2 (ENSPPAG00000028735) #23 RBFA (ENSPPAG00000027669) #24 TXNL4A (ENSPPAG00000034563) #25 ENSPPAG00000033010 SLC66A2 (ENSPPAG00000031573) CTDP1 (ENSPPAG00000042068) NFATC1 (ENSPPAG00000030766) ATP9B (ENSPPAG00000034175) ENSPPAG00000029586 GALR1 (ENSPPAG00000028798) MBP (ENSPPAG00000029936) ENSPPAG00000027666 ZNF236 (ENSPPAG00000038362) ZNF516 (ENSPPAG00000032527) TSHZ1 (ENSPPAG00000029386) Human MODERN SPECIES 9 PARD6G (ENSG00000178184) #22 ADNP2 (ENSG00000101544) #23 RBFA (ENSG00000101546) #24 TXNL4A (ENSG00000141759) #25 HSBP1L1 (ENSG00000226742) SLC66A2 (ENSG00000122490) KCNG2 (ENSG00000178342) CTDP1 (ENSG00000060069) NFATC1 (ENSG00000131196) ATP9B (ENSG00000166377) SALL3 (ENSG00000256463) GALR1 (ENSG00000166573) MBP (ENSG00000197971) ZNF236 (ENSG00000130856) ZNF516 (ENSG00000101493) SMIM21 (ENSG00000206026) Orangutan MODERN SPECIES 9 PARD6G (ENSPPYG00000037827) #22 ADNP2 (ENSPPYG00000009265) #23 RBFA (ENSPPYG00000009264) #24 TXNL4A (ENSPPYG00000009263) #25 ENSPPYG00000037420 SLC66A2 (ENSPPYG00000009262) KCNG2 (ENSPPYG00000009261) CTDP1 (ENSPPYG00000009259) NFATC1 (ENSPPYG00000009255) ATP9B (ENSPPYG00000009254) SALL3 (ENSPPYG00000009253) GALR1 (ENSPPYG00000009252) MBP (ENSPPYG00000009251) ZNF236 (ENSPPYG00000009250) ZNF516 (ENSPPYG00000009249) ENSPPYG00000037442 Gibbon MODERN SPECIES 19 PARD6G (ENSNLEG00000008415) #22 ADNP2 (ENSNLEG00000008406) #23 RBFA (ENSNLEG00000008385) #24 TXNL4A (ENSNLEG00000036299) #25 HSBP1L1 (ENSNLEG00000008376) SLC66A2 (ENSNLEG00000008361) CTDP1 (ENSNLEG00000008353) NFATC1 (ENSNLEG00000008307) ATP9B (ENSNLEG00000008230) SALL3 (ENSNLEG00000008217) GALR1 (ENSNLEG00000009350) MBP (ENSNLEG00000009336) ZNF236 (ENSNLEG00000009319) ENSNLEG00000031632 ZNF516 (ENSNLEG00000009317) ENSNLEG00000035372 Cercopithecidae ANCESTRAL SPECIES 25 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00910000147171 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 Rhinopithecus ANCESTRAL SPECIES 576 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 Black snub-nosed monkey MODERN SPECIES 2446 PARD6G (ENSRBIG00000038514) #22 ADNP2 (ENSRBIG00000031921) #23 OR10R2 (ENSRBIG00000040682) Golden snub-nosed monkey MODERN SPECIES 1004 PARD6G (ENSRROG00000043423) #22 ADNP2 (ENSRROG00000007574) #23 RBFA (ENSRROG00000030353) #24 TXNL4A (ENSRROG00000034724) #25 HSBP1L1 (ENSRROG00000036197) SLC66A2 (ENSRROG00000033400) KCNG2 (ENSRROG00000035297) CTDP1 (ENSRROG00000034796) Cercopithecinae ANCESTRAL SPECIES 22 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00910000147171 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 Vervet Monkey MODERN SPECIES 9 ENSCSAG00000018258 #22 ADNP2 (ENSCSAG00000018257) #23 RBFA (ENSCSAG00000018256) #24 TXNL4A (ENSCSAG00000018254) #25 HSBP1L1 (ENSCSAG00000018253) ENSCSAG00000019503 SLC66A2 (ENSCSAG00000018252) KCNG2 (ENSCSAG00000018249) CTDP1 (ENSCSAG00000018248) NFATC1 (ENSCSAG00000018247) ATP9B (ENSCSAG00000018245) SALL3 (ENSCSAG00000018244) ENSCSAG00000018243 MBP (ENSCSAG00000018242) ZNF236 (ENSCSAG00000018240) ENSCSAG00000018239 Cercopithecinae_a ANCESTRAL SPECIES 21 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00910000147171 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 Cercopithecinae_b ANCESTRAL SPECIES 25 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.b.a ##25 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00910000147171 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 Olive baboon MODERN SPECIES 10 PARD6G (ENSPANG00000004652) #22 ADNP2 (ENSPANG00000011713) #23 RBFA (ENSPANG00000009263) #24 ENSPANG00000037793 ##25 HSBP1L1 (ENSPANG00000011076) SLC66A2 (ENSPANG00000002943) KCNG2 (ENSPANG00000000968) CTDP1 (ENSPANG00000012831) ENSPANG00000042424 NFATC1 (ENSPANG00000014019) ATP9B (ENSPANG00000015208) SALL3 (ENSPANG00000006485) MBP (ENSPANG00000023229) ZNF236 (ENSPANG00000005965) ENSPANG00000047986 ZNF516 (ENSPANG00000005050) Cercopithecinae_d ANCESTRAL SPECIES 142 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00910000147171 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 Sooty mangabey MODERN SPECIES 248 PARD6G (ENSCATG00000002053) #22 ADNP2 (ENSCATG00000035886) #23 RBFA (ENSCATG00000013051) #24 ENSCATG00000037127 TXNL4A (ENSCATG00000039726) #25 HSBP1L1 (ENSCATG00000013374) SLC66A2 (ENSCATG00000030232) KCNG2 (ENSCATG00000045098) CTDP1 (ENSCATG00000032475) ENSCATG00000042560 NFATC1 (ENSCATG00000029374) ATP9B (ENSCATG00000032665) SALL3 (ENSCATG00000029727) GALR1 (ENSCATG00000036322) MBP (ENSCATG00000030245) ENSCATG00000016933 Drill MODERN SPECIES 427 ENSMLEG00000034926 #22 Macaca ANCESTRAL SPECIES 22 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00910000147171 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT00940000159286.b.b ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 Pig-tailed macaque MODERN SPECIES 154 ENSMNEG00000028027 PARD6G (ENSMNEG00000032064) #22 ADNP2 (ENSMNEG00000005303) #23 RBFA (ENSMNEG00000034003) #24 ENSMNEG00000032721 TXNL4A (ENSMNEG00000028687) #25 HSBP1L1 (ENSMNEG00000032907) SLC66A2 (ENSMNEG00000035707) KCNG2 (ENSMNEG00000035665) CTDP1 (ENSMNEG00000029480) NFATC1 (ENSMNEG00000014830) ENSMNEG00000039709 ATP9B (ENSMNEG00000028672) SALL3 (ENSMNEG00000029916) ENSMNEG00000037566 MBP (ENSMNEG00000008562) ZNF236 (ENSMNEG00000038296) Macaca_a ANCESTRAL SPECIES 21 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00960000192723 ENSGT00910000147171 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.a.a.a.a.b.b.b ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 Rhesus MODERN SPECIES 9 ENSMMUG00000053705 PARD6G (ENSMMUG00000056088) #22 ADNP2 (ENSMMUG00000013710) #23 RBFA (ENSMMUG00000014855) #24 TXNL4A (ENSMMUG00000001613) #25 HSBP1L1 (ENSMMUG00000048128) SLC66A2 (ENSMMUG00000001612) KCNG2 (ENSMMUG00000032486) CTDP1 (ENSMMUG00000009151) ENSMMUG00000055855 ENSMMUG00000057000 ENSMMUG00000064830 ENSMMUG00000054935 NFATC1 (ENSMMUG00000022596) ATP9B (ENSMMUG00000021792) SALL3 (ENSMMUG00000000286) ENSMMUG00000051418 Crab-eating macaque MODERN SPECIES 9 ENSMFAG00000036816 PARD6G (ENSMFAG00000062674) #22 ENSMFAG00000053349 RBFA (ENSMFAG00000045009) #24 TXNL4A (ENSMFAG00000045793) #25 HSBP1L1 (ENSMFAG00000001811) SLC66A2 (ENSMFAG00000013643) CTDP1 (ENSMFAG00000031816) ENSMFAG00000058487 ENSMFAG00000052939 NFATC1 (ENSMFAG00000021920) ENSMFAG00000063885 ATP9B (ENSMFAG00000035856) ENSMFAG00000062575 ENSMFAG00000062135 GALR1 (ENSMFAG00000063435) ENSMFAG00000041988 Platyrrhini ANCESTRAL SPECIES 26 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 ENSGT00940000160839 Mas night monkey MODERN SPECIES 290 PARD6G (ENSANAG00000020572) #22 ADNP2 (ENSANAG00000034433) #23 RBFA (ENSANAG00000029578) #24 TXNL4A (ENSANAG00000025355) #25 HSBP1L1 (ENSANAG00000031164) ENSANAG00000012603 KCNG2 (ENSANAG00000031151) CTDP1 (ENSANAG00000033762) NFATC1 (ENSANAG00000024456) ATP9B (ENSANAG00000031685) Cebidae ANCESTRAL SPECIES 28 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 ENSGT00940000160839 ENSGT00940000166220 Cebidae_a ANCESTRAL SPECIES 23 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 ENSGT00940000160839 ENSGT00940000166220 Capuchin MODERN SPECIES 324 ENSCCAG00000030742 PARD6G (ENSCCAG00000028220) #22 ADNP2 (ENSCCAG00000037993) #23 RBFA (ENSCCAG00000025293) #24 ENSCCAG00000021200 ##25 HSBP1L1 (ENSCCAG00000023553) SLC66A2 (ENSCCAG00000034335) KCNG2 (ENSCCAG00000023074) ENSCCAG00000018820 CTDP1 (ENSCCAG00000022629) NFATC1 (ENSCCAG00000027097) ATP9B (ENSCCAG00000019163) SALL3 (ENSCCAG00000034863) Bolivian squirrel monkey MODERN SPECIES 58 PARD6G (ENSSBOG00000022038) #22 ADNP2 (ENSSBOG00000035405) #23 RBFA (ENSSBOG00000024646) #24 TXNL4A (ENSSBOG00000009093) #25 HSBP1L1 (ENSSBOG00000022763) SLC66A2 (ENSSBOG00000027796) KCNG2 (ENSSBOG00000022849) CTDP1 (ENSSBOG00000025960) ATP9B (ENSSBOG00000034933) SALL3 (ENSSBOG00000023380) ENSSBOG00000025895 MBP (ENSSBOG00000030678) ZNF236 (ENSSBOG00000029994) ENSSBOG00000025494 ZNF516 (ENSSBOG00000027376) ENSSBOG00000005717 Marmoset DUPLICATION Marmoset MODERN SPECIES 4 ENSCJAG00000040905 PARD6G (ENSCJAG00000023142) #22 ADNP2 (ENSCJAG00000010119) #23 ENSCJAG00000010125 #24 TXNL4A (ENSCJAG00000010130) #25 HSBP1L1 (ENSCJAG00000048675) SLC66A2 (ENSCJAG00000082565) KCNG2 (ENSCJAG00000053684) CTDP1 (ENSCJAG00000010153) NFATC1 (ENSCJAG00000023446) ATP9B (ENSCJAG00000007347) SALL3 (ENSCJAG00000007332) ENSCJAG00000063009 ENSCJAG00000062549 ENSCJAG00000080817 MBP (ENSCJAG00000047439) ZNF236 (ENSCJAG00000008039) Marmoset MODERN SPECIES ENSCJAG00000052259 ENSCJAG00000071723 ENSCJAG00000040973 ENSCJAG00000009094 ENSCJAG00000087326 PRUNE2 (ENSCJAG00000008738) FOXB2 (ENSCJAG00000047238) ENSCJAG00000082068 ENSCJAG00000062843 ENSCJAG00000078439 ENSCJAG00000008658 ENSCJAG00000070173 ENSCJAG00000008647 PGM5 (ENSCJAG00000016121) TMEM252 (ENSCJAG00000047141) ENSCJAG00000045685 #22 ENSCJAG00000084493 ENSCJAG00000086863 ENSCJAG00000085425 FAM240B (ENSCJAG00000040192) ENSCJAG00000022053 ENSCJAG00000077191 ENSCJAG00000084127 ENSCJAG00000040530 ENSCJAG00000004536 ZNF658 (ENSCJAG00000011340) ENSCJAG00000085091 ENSCJAG00000064287 ENSCJAG00000086218 ENSCJAG00000070585 ENSCJAG00000085676 Laurasiatheria ANCESTRAL SPECIES 23 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183211.a.b #22 Common shrew MODERN SPECIES 5640 PARD6G (ENSSARG00000001525) #22 Laurasiatheria_a ANCESTRAL SPECIES 13 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 Artiodactyla ANCESTRAL SPECIES 17 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000155163.b ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 Artiodactyla_a ANCESTRAL SPECIES 17 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.b #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000155163.b ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 Artiodactyla_b ANCESTRAL SPECIES 10 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.b #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000155163.b ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 Cetacea ANCESTRAL SPECIES 11 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000155163.b ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 Odontoceti ANCESTRAL SPECIES 10 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.a.a.b #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000155163.b ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 Sperm whale MODERN SPECIES 10 PARD6G (ENSPCTG00005015672) #22 ADNP2 (ENSPCTG00005015654) #23 RBFA (ENSPCTG00005015634) #24 TXNL4A (ENSPCTG00005015555) #25 HSBP1L1 (ENSPCTG00005015498) PQLC1 (ENSPCTG00005015359) KCNG2 (ENSPCTG00005015311) CTDP1 (ENSPCTG00005014437) ENSPCTG00005014376 ATP9B (ENSPCTG00005014193) SALL3 (ENSPCTG00005013970) GALR1 (ENSPCTG00005013906) MBP (ENSPCTG00005013054) ZNF236 (ENSPCTG00005012375) ZNF516 (ENSPCTG00005012183) TSHZ1 (ENSPCTG00005012158) Odontoceti_a ANCESTRAL SPECIES 9 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.a.a.b #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000155163.b ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 Dolphin MODERN SPECIES 3137 PARD6G (ENSTTRG00000002401) #22 ADNP2 (ENSTTRG00000002400) #23 Odontoceti_b ANCESTRAL SPECIES 10 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.a.a.b #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000155163.b ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT00890000139472.f.b ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 Vaquita MODERN SPECIES 5 PARD6G (ENSPSNG00000012198) #22 ADNP2 (ENSPSNG00000012241) #23 RBFA (ENSPSNG00000012259) #24 ENSPSNG00000012284 TXNL4A (ENSPSNG00000012378) #25 ENSPSNG00000012460 ENSPSNG00000012516 KCNG2 (ENSPSNG00000012622) CTDP1 (ENSPSNG00000012690) ENSPSNG00000012721 NFATC1 (ENSPSNG00000012745) ATP9B (ENSPSNG00000012909) SALL3 (ENSPSNG00000013174) ENSPSNG00000013413 GALR1 (ENSPSNG00000013471) MBP (ENSPSNG00000013612) Monodontidae ANCESTRAL SPECIES 8 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.a.a.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000155163.b ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT00890000139472.f.b ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 Beluga whale MODERN SPECIES 25 PARD6G (ENSDLEG00000004916) #22 ADNP2 (ENSDLEG00000004923) #23 RBFA (ENSDLEG00000004928) #24 ENSDLEG00000004936 TXNL4A (ENSDLEG00000004939) #25 ENSDLEG00000004942 PQLC1 (ENSDLEG00000004948) KCNG2 (ENSDLEG00000004952) CTDP1 (ENSDLEG00000004958) ENSDLEG00000004966 NFATC1 (ENSDLEG00000004971) ATP9B (ENSDLEG00000005315) SALL3 (ENSDLEG00000007843) ENSDLEG00000007848 GALR1 (ENSDLEG00000007850) MBP (ENSDLEG00000007855) Narwhal MODERN SPECIES 295 PARD6G (ENSMMNG00015001889) #22 ADNP2 (ENSMMNG00015001907) #23 RBFA (ENSMMNG00015003973) #24 ENSMMNG00015003996 ENSMMNG00015004029 #25 HSBP1L1 (ENSMMNG00015004051) SLC66A2 (ENSMMNG00015004076) KCNG2 (ENSMMNG00015004101) CTDP1 (ENSMMNG00015004114) NFATC1 (ENSMMNG00015004144) ATP9B (ENSMMNG00015004205) SALL3 (ENSMMNG00015004296) GALR1 (ENSMMNG00015004319) MBP (ENSMMNG00015004355) ZNF236 (ENSMMNG00015004434) ENSMMNG00015004498 Blue whale MODERN SPECIES 5 PARD6G (ENSBMSG00010009629) #22 ADNP2 (ENSBMSG00010009611) #23 RBFA (ENSBMSG00010009594) #24 TXNL4A (ENSBMSG00010009583) #25 SLC66A2 (ENSBMSG00010009573) KCNG2 (ENSBMSG00010009563) CTDP1 (ENSBMSG00010009542) ENSBMSG00010009531 NFATC1 (ENSBMSG00010009496) ATP9B (ENSBMSG00010009457) SALL3 (ENSBMSG00010009423) ENSBMSG00010009414 GALR1 (ENSBMSG00010009407) MBP (ENSBMSG00010009319) ENSBMSG00010009296 ENSBMSG00010009291 Pecora ANCESTRAL SPECIES 26 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.b #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000155163.b ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 Yarkand deer MODERN SPECIES 19 ENSCHYG00000014407 ENSCHYG00000014347 PARD6G (ENSCHYG00000014295) #22 ADNP2 (ENSCHYG00000014078) #23 RBFA (ENSCHYG00000026035) #24 ENSCHYG00000026029 TXNL4A (ENSCHYG00000026004) #25 HSBP1L1 (ENSCHYG00000025985) SLC66A2 (ENSCHYG00000025926) KCNG2 (ENSCHYG00000025901) CTDP1 (ENSCHYG00000025858) ENSCHYG00000025845 NFATC1 (ENSCHYG00000025717) ATP9B (ENSCHYG00000025490) SALL3 (ENSCHYG00000025411) ENSCHYG00000025397 GALR1 (ENSCHYG00000025374) MBP (ENSCHYG00000025251) Percora_a ANCESTRAL SPECIES 28 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.b #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000155163.b ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 Bovidae ANCESTRAL SPECIES 28 ENSGT01100000263496.A.b ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.b #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000155163.b ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 Caprinae ANCESTRAL SPECIES 25 ENSGT01100000263496.D.a.u.b.b ENSGT01100000263496.D.b.a.e.t.b.b ENSGT01100000263496.D.a.u.b.a.b ENSGT01100000263496.D.a.u.b.a.a ENSGT01100000263496.C.c.a.t ENSGT01050000244815.A.c.a.a.b.a.b ENSGT01100000263496.A.b ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.b #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT01030000234871 Rambouillet Sheep MODERN SPECIES 15 ENSOARG00020011052 ENSOARG00020011254 ENSOARG00020011414 PARD6G (ENSOARG00020011549) #22 ADNP2 (ENSOARG00020011588) #23 ENSOARG00020011645 #24 ENSOARG00020011706 TXNL4A (ENSOARG00020011771) #25 HSBP1L1 (ENSOARG00020011927) SLC66A2 (ENSOARG00020011960) KCNG2 (ENSOARG00020012110) CTDP1 (ENSOARG00020012196) NFATC1 (ENSOARG00020012783) ATP9B (ENSOARG00020014579) GALR1 (ENSOARG00020015092) ZNF236 (ENSOARG00020015393) ENSOARG00020015995 TSHZ1 (ENSOARG00020016102) PTGR3 (ENSOARG00020016189) Goat MODERN SPECIES 16 ENSCHIG00000000424 ENSCHIG00000000470 ENSCHIG00000019233 ENSCHIG00000019729 ENSCHIG00000014102 ENSCHIG00000019017 PARD6G (ENSCHIG00000021859) #22 ADNP2 (ENSCHIG00000010631) #23 RBFA (ENSCHIG00000012122) #24 ENSCHIG00000016104 TXNL4A (ENSCHIG00000019218) #25 ENSCHIG00000021857 SLC66A2 (ENSCHIG00000001513) KCNG2 (ENSCHIG00000011977) CTDP1 (ENSCHIG00000016412) NFATC1 (ENSCHIG00000020951) ATP9B (ENSCHIG00000018159) SALL3 (ENSCHIG00000000145) ENSCHIG00000000252 GALR1 (ENSCHIG00000000288) ENSCHIG00000000358 ZNF236 (ENSCHIG00000000391) Bovinae ANCESTRAL SPECIES 28 ENSGT01100000263496.A.b.d.b ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.b #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000155163.b ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 Bos ANCESTRAL SPECIES 29 ENSGT01100000263496.A.b.d.b ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT01100000263480.a.a.b.b.b.a.b.a.b.b.a.b ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.b #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641.h ENSGT00940000155163.b ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 Bos_b ANCESTRAL SPECIES 34 ENSGT01100000263496.A.b.d.b ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT01100000263480.a.a.b.b.b.a.b.a.b.b.a.b ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.b #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641.h ENSGT00940000155163.b ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 Cow MODERN SPECIES 16 OR9M1 (ENSBTAG00000051525) OR9M1D (ENSBTAG00000050400) PARD6G (ENSBTAG00000005917) #22 ADNP2 (ENSBTAG00000005916) #23 RBFA (ENSBTAG00000036297) #24 ENSBTAG00000036298 TXNL4A (ENSBTAG00000013587) #25 ENSBTAG00000050688 SLC66A2 (ENSBTAG00000054103) KCNG2 (ENSBTAG00000013665) CTDP1 (ENSBTAG00000053484) NFATC1 (ENSBTAG00000000656) ATP9B (ENSBTAG00000001224) SALL3 (ENSBTAG00000050200) GALR1 (ENSBTAG00000021003) MBP (ENSBTAG00000022890) ZNF236 (ENSBTAG00000017517) ENSBTAG00000053937 Hybrid Bos Indicus MODERN SPECIES 16 ENSBIXG00005023887 ENSBIXG00005023870 ENSBIXG00005023830 ENSBIXG00005004076 ENSBIXG00005023773 ENSBIXG00005023762 ENSBIXG00005023753 PARD6G (ENSBIXG00005006840) #22 ADNP2 (ENSBIXG00005004059) #23 ENSBIXG00005023670 RBFA (ENSBIXG00005023663) #24 ENSBIXG00005023644 TXNL4A (ENSBIXG00005023620) #25 HSBP1L1 (ENSBIXG00005023541) ENSBIXG00005023522 KCNG2 (ENSBIXG00005004008) CTDP1 (ENSBIXG00005023401) ENSBIXG00005023369 NFATC1 (ENSBIXG00005023346) ATP9B (ENSBIXG00005006472) SALL3 (ENSBIXG00005023059) ENSBIXG00005023023 GALR1 (ENSBIXG00005023001) Bos_a ANCESTRAL SPECIES 73 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT01100000263480.a.a.b.b.b.a.b.a.b.b.a.b ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.b #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641.h ENSGT00940000155163.b ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 Domestic yak MODERN SPECIES 13 ENSBGRG00000019835 ZNF24 (ENSBGRG00000019773) INO80C (ENSBGRG00000019595) GALNT1 (ENSBGRG00000019395) C18orf21 (ENSBGRG00000019254) RPRD1A (ENSBGRG00000019009) SLC39A6 (ENSBGRG00000018855) ELP2 (ENSBGRG00000017287) MOCOS (ENSBGRG00000016605) FHOD3 (ENSBGRG00000015603) TPGS2 (ENSBGRG00000015437) ENSBGRG00000015416 KIAA1328 (ENSBGRG00000015254) ENSBGRG00000015192 ENSBGRG00000015067 PARD6G (ENSBGRG00000014943) #22 ADNP2 (ENSBGRG00000024707) #23 ENSBGRG00000024692 ENSBGRG00000024671 #24 ENSBGRG00000024626 TXNL4A (ENSBGRG00000024576) #25 HSBP1L1 (ENSBGRG00000024554) ENSBGRG00000024398 KCNG2 (ENSBGRG00000024339) CTDP1 (ENSBGRG00000024256) ENSBGRG00000024239 NFATC1 (ENSBGRG00000023817) ATP9B (ENSBGRG00000023552) SALL3 (ENSBGRG00000023520) GALR1 (ENSBGRG00000023482) ENSBGRG00000023225 Wild yak MODERN SPECIES 1987 PARD6G (ENSBMUG00000018236) #22 ADNP2 (ENSBMUG00000018260) #23 RBFA (ENSBMUG00000018295) #24 ENSBMUG00000018308 TXNL4A (ENSBMUG00000018332) #25 ENSBMUG00000018359 SLC66A2 (ENSBMUG00000018392) ENSBMUG00000018406 CTDP1 (ENSBMUG00000018428) ENSBMUG00000018444 ENSBMUG00000018452 American bison MODERN SPECIES 3267 PARD6G (ENSBBBG00000003274) #22 ADNP2 (ENSBBBG00000014358) #23 ENSBBBG00000014378 TXNL4A (ENSBBBG00000014383) #25 HSBP1L1 (ENSBBBG00000014388) SLC66A2 (ENSBBBG00000003309) CTDP1 (ENSBBBG00000003330) ENSBBBG00000014441 ATP9B (ENSBBBG00000009131) SALL3 (ENSBBBG00000003511) GALR1 (ENSBBBG00000014588) MBP (ENSBBBG00000014716) ZNF236 (ENSBBBG00000007133) ZNF516 (ENSBBBG00000014795) TSHZ1 (ENSBBBG00000014803) ENSBBBG00000002833 Siberian musk deer MODERN SPECIES 373 ENSMMSG00000006868 ENSMMSG00000006895 PARD6G (ENSMMSG00000006923) #22 ENSMMSG00000006967 ADNP2 (ENSMMSG00000006994) #23 ENSMMSG00000007011 ENSMMSG00000007032 RBFA (ENSMMSG00000007047) #24 ENSMMSG00000007067 ENSMMSG00000007113 #25 HSBP1L1 (ENSMMSG00000007184) SLC66A2 (ENSMMSG00000007214) KCNG2 (ENSMMSG00000007319) CTDP1 (ENSMMSG00000007350) NFATC1 (ENSMMSG00000007403) ATP9B (ENSMMSG00000007533) SALL3 (ENSMMSG00000007960) GALR1 (ENSMMSG00000008077) Camelidae ANCESTRAL SPECIES 53 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 Arabian camel MODERN SPECIES 23 PARD6G (ENSCDRG00005019778) #22 ADNP2 (ENSCDRG00005019800) #23 RBFA (ENSCDRG00005019809) #24 ENSCDRG00005008919 ENSCDRG00005008969 #25 HSBP1L1 (ENSCDRG00005009081) SLC66A2 (ENSCDRG00005009135) KCNG2 (ENSCDRG00005009403) CTDP1 (ENSCDRG00005009526) NFATC1 (ENSCDRG00005009800) ATP9B (ENSCDRG00005009917) SALL3 (ENSCDRG00005010105) GALR1 (ENSCDRG00005010287) MBP (ENSCDRG00005010386) ZNF236 (ENSCDRG00005011227) ZNF516 (ENSCDRG00005011507) Alpaca MODERN SPECIES 2211 PARD6G (ENSVPAG00000007958) #22 Suina ANCESTRAL SPECIES 27 ENSGT00940000161169 ENSGT00940000163788 ENSGT00530000063936.b ENSGT00910000147804 ENSGT00940000153229.B ENSGT00390000002634.b ENSGT00940000153231.B ENSGT01100000263525.a.b.b.c.b ENSGT00390000003298 ENSGT00390000012891 ENSGT00390000007688 ENSGT01050000244941.B.d ENSGT00950000183036.a.b ENSGT00940000155173.h ENSGT00940000154660.b.d.a ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 Pig MODERN SPECIES 14 ENSSSCG00000044862 SAMD13 (ENSSSCG00000026005) UOX (ENSSSCG00000022206) DNASE2B (ENSSSCG00000026532) RPF1 (ENSSSCG00000022145) GNG5 (ENSSSCG00000053185) SPATA1 (ENSSSCG00000029882) CTBS (ENSSSCG00000003758) ENSSSCG00000044786 SSX2IP (ENSSSCG00000003757) LPAR3 (ENSSSCG00000003756) MCOLN2 (ENSSSCG00000003755) ENSSSCG00000003754 ENSSSCG00000003753 ENSSSCG00000060282 PARD6G (ENSSSCG00000023376) #22 ADNP2 (ENSSSCG00000038632) #23 ENSSSCG00000038475 TXNL4A (ENSSSCG00000005777) #25 HSBP1L1 (ENSSSCG00000005778) SLC66A2 (ENSSSCG00000023171) KCNG2 (ENSSSCG00000005780) SYT4 (ENSSSCG00000037079) ENSSSCG00000037233 PIK3C3 (ENSSSCG00000003749) CELF4 (ENSSSCG00000003748) ENSSSCG00000045019 ENSSSCG00000047288 KIAA1328 (ENSSSCG00000003747) TPGS2 (ENSSSCG00000026953) ENSSSCG00000003746 Chacoan peccary MODERN SPECIES 53 PRKACB (ENSCWAG00000002664) ENSCWAG00000002559 SAMD13 (ENSCWAG00000002546) ENSCWAG00000002540 ENSCWAG00000002530 DNASE2B (ENSCWAG00000002516) RPF1 (ENSCWAG00000002495) ENSCWAG00000002479 SPATA1 (ENSCWAG00000002456) CTBS (ENSCWAG00000002441) SSX2IP (ENSCWAG00000002428) LPAR3 (ENSCWAG00000002414) MCOLN2 (ENSCWAG00000002383) ENSCWAG00000001060 ENSCWAG00000000879 ENSCWAG00000000868 #22 ADNP2 (ENSCWAG00000000856) #23 RBFA (ENSCWAG00000000838) #24 ENSCWAG00000000812 TXNL4A (ENSCWAG00000000771) #25 ENSCWAG00000000741 SLC66A2 (ENSCWAG00000000639) KCNG2 (ENSCWAG00000000611) Laurasiatheria_b ANCESTRAL SPECIES 13 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT01030000234871 Carnivora ANCESTRAL SPECIES 13 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT01030000234871 Caniformia ANCESTRAL SPECIES 9 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 Canidae DUPLICATION Canidae ANCESTRAL SPECIES ENSGT00950000183211.a.b.c #22 Red fox MODERN SPECIES 25 ENSVVUG00000018986 #22 ENSVVUG00000018985 #22 ADNP2 (ENSVVUG00000018983) #23 ENSVVUG00000018977 #24 TXNL4A (ENSVVUG00000018972) #25 ENSVVUG00000018958 SLC66A2 (ENSVVUG00000018948) CTDP1 (ENSVVUG00000018937) ENSVVUG00000018926 NFATC1 (ENSVVUG00000018908) ATP9B (ENSVVUG00000018860) SALL3 (ENSVVUG00000018838) GALR1 (ENSVVUG00000018795) MBP (ENSVVUG00000018785) ZNF236 (ENSVVUG00000018724) ZNF516 (ENSVVUG00000018686) Canidae ANCESTRAL SPECIES 58 ENSGT00950000183211.a.b.d #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 ENSGT00950000183051.a.a ENSGT00920000149172 Canis_lupus ANCESTRAL SPECIES ENSGT00950000183211.a.b.d #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT01030000234871 ENSGT01090000260046.e.b.b.a.b.a.a.b.b.b.b.b.a.a.b.a.b.b ENSGT00940000160839 Dog MODERN SPECIES ENPP1 (ENSCAFG00845000008) ENSCAFG00845000017 ENSCAFG00845000018 ENSCAFG00845000019 #22 ADNP2 (ENSCAFG00845000021) #23 RBFA (ENSCAFG00845000024) #24 TXNL4A (ENSCAFG00845000026) #25 HSBP1L1 (ENSCAFG00845000030) ENSCAFG00845000033 CTDP1 (ENSCAFG00845000045) NFATC1 (ENSCAFG00845000073) ATP9B (ENSCAFG00845000134) SALL3 (ENSCAFG00845000191) GALR1 (ENSCAFG00845000275) MBP (ENSCAFG00845000353) ZNF236 (ENSCAFG00845000448) ENSCAFG00845000527 ENSCAFG00845000551 ZNF516 (ENSCAFG00845000590) Dingo MODERN SPECIES 125 ENPP1 (ENSCAFG00020012520) ENSCAFG00020014611 ENSCAFG00020014617 #22 ADNP2 (ENSCAFG00020014621) #23 RBFA (ENSCAFG00020014628) #24 TXNL4A (ENSCAFG00020014637) #25 HSBP1L1 (ENSCAFG00020014641) ENSCAFG00020014644 CTDP1 (ENSCAFG00020014667) NFATC1 (ENSCAFG00020014734) ATP9B (ENSCAFG00020014769) SALL3 (ENSCAFG00020015092) GALR1 (ENSCAFG00020015114) ENSCAFG00020015125 ZNF236 (ENSCAFG00020015152) ENSCAFG00020015228 ENSCAFG00020015238 ZNF516 (ENSCAFG00020015256) Red fox MODERN SPECIES 25 ENSVVUG00000018986 #22 ENSVVUG00000018985 #22 ADNP2 (ENSVVUG00000018983) #23 ENSVVUG00000018977 #24 TXNL4A (ENSVVUG00000018972) #25 ENSVVUG00000018958 SLC66A2 (ENSVVUG00000018948) CTDP1 (ENSVVUG00000018937) ENSVVUG00000018926 NFATC1 (ENSVVUG00000018908) ATP9B (ENSVVUG00000018860) SALL3 (ENSVVUG00000018838) GALR1 (ENSVVUG00000018795) MBP (ENSVVUG00000018785) ZNF236 (ENSVVUG00000018724) ZNF516 (ENSVVUG00000018686) TSHZ1 (ENSVVUG00000018675) Caniformia_b ANCESTRAL SPECIES 25 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 Mustelinae ANCESTRAL SPECIES 5 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00390000015641 ENSGT00940000157616.f ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787.kb ENSGT00940000160839 ENSGT00950000183051.a.a ENSGT00920000149172 American mink MODERN SPECIES 5 PARD6G (ENSNVIG00000010951) #22 ADNP2 (ENSNVIG00000010960) #23 ENSNVIG00000010964 #24 ENSNVIG00000010974 #25 HSBP1L1 (ENSNVIG00000010980) SLC66A2 (ENSNVIG00000010991) CTDP1 (ENSNVIG00000011033) ENSNVIG00000011164 ENSNVIG00000011185 ATP9B (ENSNVIG00000011196) SALL3 (ENSNVIG00000011252) MBP (ENSNVIG00000011283) ZNF236 (ENSNVIG00000011386) ENSNVIG00000011446 ENSNVIG00000011477 TSHZ1 (ENSNVIG00000011486) Ursidae ANCESTRAL SPECIES 23 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772.b ENSGT00940000156787 ENSGT00940000160839 Ursus ANCESTRAL SPECIES 156 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT01000000215617 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071.i ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772.b ENSGT00940000156787 American black bear MODERN SPECIES 1872 ENSUAMG00000025855 #22 ADNP2 (ENSUAMG00000025845) #23 RBFA (ENSUAMG00000025841) #24 ENSUAMG00000025839 Giant Panda MODERN SPECIES 5 ENSAMEG00000010412 #22 ADNP2 (ENSAMEG00000010404) #23 ENSAMEG00000010397 TXNL4A (ENSAMEG00000010386) #25 HSBP1L1 (ENSAMEG00000031443) SLC66A2 (ENSAMEG00000010378) KCNG2 (ENSAMEG00000010374) CTDP1 (ENSAMEG00000010355) NFATC1 (ENSAMEG00000010314) ATP9B (ENSAMEG00000010214) SALL3 (ENSAMEG00000010206) GALR1 (ENSAMEG00000003075) MBP (ENSAMEG00000010530) ZNF236 (ENSAMEG00000010549) ZNF516 (ENSAMEG00000028859) TSHZ1 (ENSAMEG00000018999) Felidae ANCESTRAL SPECIES 24 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT01030000234871 Cat MODERN SPECIES 243 PARD6G (ENSFCAG00000041798) #22 ADNP2 (ENSFCAG00000022677) #23 RBFA (ENSFCAG00000046543) #24 ENSFCAG00000027544 TXNL4A (ENSFCAG00000000568) #25 HSBP1L1 (ENSFCAG00000022901) SLC66A2 (ENSFCAG00000000567) KCNG2 (ENSFCAG00000040828) CTDP1 (ENSFCAG00000000566) NFATC1 (ENSFCAG00000000884) ATP9B (ENSFCAG00000008455) SALL3 (ENSFCAG00000028839) GALR1 (ENSFCAG00000008682) ENSFCAG00000053046 MBP (ENSFCAG00000034257) ZNF236 (ENSFCAG00000001780) Panthera ANCESTRAL SPECIES 24 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT01030000234871 Tiger MODERN SPECIES 206 ENSPTIG00000008795 #22 ADNP2 (ENSPTIG00000011252) #23 ENSPTIG00000011268 #24 ENSPTIG00000011288 TXNL4A (ENSPTIG00000011304) #25 HSBP1L1 (ENSPTIG00000011319) ENSPTIG00000011326 ATP9B (ENSPTIG00000011375) GALR1 (ENSPTIG00000011401) MBP (ENSPTIG00000011434) ZNF236 (ENSPTIG00000011566) PTGR3 (ENSPTIG00000008802) ENSPTIG00000011611 ZNF407 (ENSPTIG00000011621) CNDP1 (ENSPTIG00000011647) CNDP2 (ENSPTIG00000011679) Panthera_a ANCESTRAL SPECIES 26 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT01030000234871 leopard MODERN SPECIES 95 PARD6G (ENSPPRG00000014374) #22 RBFA (ENSPPRG00000014340) #24 ENSPPRG00000014302 TXNL4A (ENSPPRG00000014185) #25 HSBP1L1 (ENSPPRG00000014154) SLC66A2 (ENSPPRG00000014124) KCNG2 (ENSPPRG00000014050) CTDP1 (ENSPPRG00000014019) NFATC1 (ENSPPRG00000013969) ATP9B (ENSPPRG00000013726) GALR1 (ENSPPRG00000013426) MBP (ENSPPRG00000013404) ZNF236 (ENSPPRG00000012906) ENSPPRG00000012771 ZNF516 (ENSPPRG00000012759) TSHZ1 (ENSPPRG00000011295) lion MODERN SPECIES 12 YPEL1 (ENSPLOG00000012626) MAPK1 (ENSPLOG00000012417) PPM1F (ENSPLOG00000012284) TOP3B (ENSPLOG00000011997) VPREB1 (ENSPLOG00000011921) ENSPLOG00000011867 ZNF70 (ENSPLOG00000011843) VPREB3 (ENSPLOG00000011816) C22orf15 (ENSPLOG00000011721) CHCHD10 (ENSPLOG00000011672) MMP11 (ENSPLOG00000011595) SMARCB1 (ENSPLOG00000011452) DERL3 (ENSPLOG00000011395) SLC2A11 (ENSPLOG00000011122) MIF (ENSPLOG00000011059) PARD6G (ENSPLOG00000020479) #22 ADNP2 (ENSPLOG00000020454) #23 RBFA (ENSPLOG00000020420) #24 ENSPLOG00000020368 TXNL4A (ENSPLOG00000020326) #25 HSBP1L1 (ENSPLOG00000020295) ENSPLOG00000020197 KCNG2 (ENSPLOG00000020143) CTDP1 (ENSPLOG00000020101) NFATC1 (ENSPLOG00000019996) ATP9B (ENSPLOG00000019535) SALL3 (ENSPLOG00000019400) GALR1 (ENSPLOG00000019356) ENSPLOG00000019137 ZNF236 (ENSPLOG00000018933) ENSPLOG00000018869 Laurasiatheria_c ANCESTRAL SPECIES 24 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 Equus ANCESTRAL SPECIES 36 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 Donkey MODERN SPECIES 3 GDF6 (ENSEASG00005003314) CFAP418 (ENSEASG00005003320) PLEKHF2 (ENSEASG00005034229) NDUFAF6 (ENSEASG00005003333) TP53INP1 (ENSEASG00005003343) CCNE2 (ENSEASG00005003365) INTS8 (ENSEASG00005003493) DPY19L4 (ENSEASG00005003633) ESRP1 (ENSEASG00005003705) VIRMA (ENSEASG00005004018) ENSEASG00005004021 ENSEASG00005038425 ENSEASG00005032903 ENSEASG00005037139 ENSEASG00005036356 ENSEASG00005036290 #22 ENSEASG00005026564 ENSEASG00005038230 RBFA (ENSEASG00005037791) #24 ENSEASG00005001925 TXNL4A (ENSEASG00005026566) #25 HSBP1L1 (ENSEASG00005001945) SLC66A2 (ENSEASG00005001951) KCNG2 (ENSEASG00005001957) CTDP1 (ENSEASG00005001965) NFATC1 (ENSEASG00005001978) ATP9B (ENSEASG00005002054) SALL3 (ENSEASG00005002071) GALR1 (ENSEASG00005002075) MBP (ENSEASG00005002078) ZNF236 (ENSEASG00005002084) Horse MODERN SPECIES 29 ENSECAG00000053635 ENSECAG00000056046 ADNP2 (ENSECAG00000008310) #23 PARD6G (ENSECAG00000008355) #22 ENSECAG00000054031 RBFA (ENSECAG00000008292) #24 ENSECAG00000007419 TXNL4A (ENSECAG00000006468) ##25 TXNL4A (ENSECAG00000055188) #25 SLC66A2 (ENSECAG00000042673) KCNG2 (ENSECAG00000034020) CTDP1 (ENSECAG00000021835) ENSECAG00000045161 NFATC1 (ENSECAG00000019813) SALL3 (ENSECAG00000015414) GALR1 (ENSECAG00000014845) MBP (ENSECAG00000010961) ENSECAG00000050762 ZNF236 (ENSECAG00000005459) Chiroptera ANCESTRAL SPECIES 26 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 Microchiroptera ANCESTRAL SPECIES 26 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT01030000234871 ENSGT00940000156787 Greater horseshoe bat MODERN SPECIES 10 PARD6G (ENSRFEG00010019971) #22 ADNP2 (ENSRFEG00010019937) #23 RBFA (ENSRFEG00010019882) #24 TXNL4A (ENSRFEG00010019794) #25 HSBP1L1 (ENSRFEG00010019755) ENSRFEG00010019698 KCNG2 (ENSRFEG00010019655) CTDP1 (ENSRFEG00010019640) NFATC1 (ENSRFEG00010019522) ATP9B (ENSRFEG00010019457) ENSRFEG00010019419 GALR1 (ENSRFEG00010019399) MBP (ENSRFEG00010019222) ENSRFEG00010019164 ZNF236 (ENSRFEG00010019074) ZNF516 (ENSRFEG00010019046) Microbat MODERN SPECIES 1137 SALL3 (ENSMLUG00000010582) ATP9B (ENSMLUG00000010589) NFATC1 (ENSMLUG00000001296) CTDP1 (ENSMLUG00000011676) KCNG2 (ENSMLUG00000016184) SLC66A2 (ENSMLUG00000016199) TXNL4A (ENSMLUG00000009188) #25 ENSMLUG00000026918 RBFA (ENSMLUG00000006729) #24 ADNP2 (ENSMLUG00000006751) #23 PARD6G (ENSMLUG00000000673) #22 RBBP8 (ENSMLUG00000014469) ENSMLUG00000013566 MIB1 (ENSMLUG00000004022) ABHD3 (ENSMLUG00000009135) SNRPD1 (ENSMLUG00000009124) ESCO1 (ENSMLUG00000009110) GREB1L (ENSMLUG00000009091) ENSMLUG00000025553 ROCK1 (ENSMLUG00000014044) USP14 (ENSMLUG00000004069) ENSMLUG00000004090 Atlantogenata ANCESTRAL SPECIES 22 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 ENSGT00950000183051.a.a Afrotheria ANCESTRAL SPECIES 23 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a #25 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 ENSGT00950000183051.a.a Afrotheria_a ANCESTRAL SPECIES 22 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 ENSGT00390000011362 #24 ENSGT00940000162740 ENSGT00390000010779.a.a.o.a #25 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 ENSGT00940000157071 ENSGT00940000159356.a.a ENSGT01050000244841.A.b.a.b.a.a ENSGT00390000014772 ENSGT00940000156787 ENSGT00940000160839 ENSGT00950000183051.a.a Elephant MODERN SPECIES 375 ENSLAFG00000009314 ZNF329 (ENSLAFG00000009318) ENSLAFG00000007890 ZNF8 (ENSLAFG00000003601) ENSLAFG00000006762 A1BG (ENSLAFG00000003640) ENSLAFG00000029215 RPS5 (ENSLAFG00000008734) ZNF446 (ENSLAFG00000013556) SLC27A5 (ENSLAFG00000002728) ZBTB45 (ENSLAFG00000032480) TRIM28 (ENSLAFG00000026316) CHMP2A (ENSLAFG00000029934) ENSLAFG00000029838 MZF1 (ENSLAFG00000030303) PARD6G (ENSLAFG00000001598) #22 ADNP2 (ENSLAFG00000001597) #23 RBFA (ENSLAFG00000015100) #24 ENSLAFG00000031567 ENSLAFG00000003190 #25 SLC66A2 (ENSLAFG00000015804) KCNG2 (ENSLAFG00000032162) CTDP1 (ENSLAFG00000018621) NFATC1 (ENSLAFG00000008297) ATP9B (ENSLAFG00000012641) SALL3 (ENSLAFG00000013521) GALR1 (ENSLAFG00000027134) ENSLAFG00000007757 ENSLAFG00000032306 ENSLAFG00000007752 ENSLAFG00000031333 Hyrax MODERN SPECIES 5938 ENSPCAG00000011443 #22 Tenrec MODERN SPECIES 7035 PARD6G (ENSETEG00000014243) #22 Xenarthra ANCESTRAL SPECIES 1777 ENSGT00950000183211.a.b #22 ENSGT00530000063631.a #23 Armadillo MODERN SPECIES 2313 PARD6G (ENSDNOG00000036988) #22 ADNP2 (ENSDNOG00000003747) #23