Euarchontoglires	ANCESTRAL SPECIES	17	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a #9	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00910000148217	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35
Primates	ANCESTRAL SPECIES	17	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a #9	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00910000148217	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35
Strepsirrhini	ANCESTRAL SPECIES	12	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a #9	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00910000148217	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36
Bushbaby	MODERN SPECIES	138	DDX27 (ENSOGAG00000002130) #7	ZNFX1 (ENSOGAG00000002132) #8	ENSOGAG00000029920 #9	KCNB1 (ENSOGAG00000025413) #10	PTGIS (ENSOGAG00000012037) #11	B4GALT5 (ENSOGAG00000002134) #12	SLC9A8 (ENSOGAG00000007196) #13	SPATA2 (ENSOGAG00000007201) #14	RNF114 (ENSOGAG00000003953) #15	SNAI1 (ENSOGAG00000030111) #16	ENSOGAG00000025894 #17	PEDS1 (ENSOGAG00000009132) #18	CEBPB (ENSOGAG00000026467) #19	PTPN1 (ENSOGAG00000005483) #20	RIPOR3 (ENSOGAG00000005486) #21	PARD6B (ENSOGAG00000005490) #22	BCAS4 (ENSOGAG00000005491) #23	ADNP (ENSOGAG00000005381) #24	DPM1 (ENSOGAG00000005384) #25	MOCS3 (ENSOGAG00000030283) #26	KCNG1 (ENSOGAG00000028070) #27	NFATC2 (ENSOGAG00000013787) #28	ATP9A (ENSOGAG00000013793) #29	SALL4 (ENSOGAG00000013799) #30	ZFP64 (ENSOGAG00000005192) #31	TSHZ2 (ENSOGAG00000008544) #32	ENSOGAG00000033043 #33	ZNF217 (ENSOGAG00000001685) #34	BCAS1 (ENSOGAG00000000952) #35	CYP24A1 (ENSOGAG00000016370) #36	PFDN4 (ENSOGAG00000016375) #37
Lemuriformes	ANCESTRAL SPECIES	10	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a #9	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00910000148217	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36
Mouse lemur	MODERN SPECIES	9	STAU1 (ENSMICG00000001995)	DDX27 (ENSMICG00000002005) #7	ZNFX1 (ENSMICG00000002013) #8	KCNB1 (ENSMICG00000042395) #10	PTGIS (ENSMICG00000017617) #11	B4GALT5 (ENSMICG00000036109) #12	SLC9A8 (ENSMICG00000011138) #13	SPATA2 (ENSMICG00000029981) #14	RNF114 (ENSMICG00000029402) #15	SNAI1 (ENSMICG00000042228) #16	ENSMICG00000011166 #17	ENSMICG00000047905	CEBPB (ENSMICG00000035606) #19	PTPN1 (ENSMICG00000017702) #20	RIPOR3 (ENSMICG00000017704) #21	PARD6B (ENSMICG00000032853) #22	BCAS4 (ENSMICG00000015943) #23	ADNP (ENSMICG00000027969) #24	DPM1 (ENSMICG00000003186) #25	KCNG1 (ENSMICG00000032333) #27	NFATC2 (ENSMICG00000000025) #28	ATP9A (ENSMICG00000000026) #29	SALL4 (ENSMICG00000000027) #30	ENSMICG00000047411	ZFP64 (ENSMICG00000034213) #31	TSHZ2 (ENSMICG00000035295) #32	ENSMICG00000028159	BANF2 (ENSMICG00000032062)	RRBP1 (ENSMICG00000013693)	DSTN (ENSMICG00000035158)	BFSP1 (ENSMICG00000028889)
Lemuriformes_a	ANCESTRAL SPECIES	70	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a #9	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00910000148217	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36
Greater bamboo lemur	MODERN SPECIES	301	DDX27 (ENSPSMG00000012321) #7	ZNFX1 (ENSPSMG00000012403) #8	ENSPSMG00000012474 #9	KCNB1 (ENSPSMG00000012485) #10	PTGIS (ENSPSMG00000012523) #11	B4GALT5 (ENSPSMG00000012547) #12	SLC9A8 (ENSPSMG00000012605) #13	SPATA2 (ENSPSMG00000012618) #14	RNF114 (ENSPSMG00000012630) #15	SNAI1 (ENSPSMG00000012652) #16	ENSPSMG00000012726 #17	PEDS1 (ENSPSMG00000012778) #18	CEBPB (ENSPSMG00000012787) #19	PTPN1 (ENSPSMG00000012808) #20	RIPOR3 (ENSPSMG00000012833) #21	PARD6B (ENSPSMG00000012840) #22	ENSPSMG00000012844 #23	ENSPSMG00000012850	ADNP (ENSPSMG00000012865) #24	DPM1 (ENSPSMG00000012878) #25	MOCS3 (ENSPSMG00000012882) #26	KCNG1 (ENSPSMG00000012892) #27	NFATC2 (ENSPSMG00000012934) #28	ATP9A (ENSPSMG00000013024) #29	ENSPSMG00000013048 #30	ZFP64 (ENSPSMG00000013089) #31
Coquerels sifaka	MODERN SPECIES	896														PTPN1 (ENSPCOG00000015888) #20	RIPOR3 (ENSPCOG00000013516) #21	ENSPCOG00000023098 #22	BCAS4 (ENSPCOG00000016341) #23	ADNP (ENSPCOG00000014574) #24	DPM1 (ENSPCOG00000013837) #25	KCNG1 (ENSPCOG00000025006) #27
Haplorrhini	ANCESTRAL SPECIES	13	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000163703.a	ENSGT00940000158854	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36
Tarsier	MODERN SPECIES	3260																PARD6B (ENSTSYG00000012293) #22
Simiiformes	ANCESTRAL SPECIES	18	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00910000148217	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34
Catarrhini	ANCESTRAL SPECIES	19	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00910000148217	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33
Cercopithecidae	ANCESTRAL SPECIES	16	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34
Rhinopithecus	ANCESTRAL SPECIES	151	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00910000147818	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36
Black snub-nosed monkey	MODERN SPECIES	897	ZNFX1 (ENSRBIG00000041059) #8	ENSRBIG00000043627	ENSRBIG00000040052	KCNB1 (ENSRBIG00000035685) #10	PTGIS (ENSRBIG00000004920) #11	B4GALT5 (ENSRBIG00000032318) #12	ENSRBIG00000034464	SLC9A8 (ENSRBIG00000028870) #13	SPATA2 (ENSRBIG00000028973) #14	RNF114 (ENSRBIG00000026643) #15	SNAI1 (ENSRBIG00000026992) #16	ENSRBIG00000044255 #17	PEDS1 (ENSRBIG00000043990) #18	PTPN1 (ENSRBIG00000011178) #20	RIPOR3 (ENSRBIG00000044567) #21	PARD6B (ENSRBIG00000033259) #22	BCAS4 (ENSRBIG00000040298) #23	ADNP (ENSRBIG00000027632) #24	DPM1 (ENSRBIG00000025547) #25	MOCS3 (ENSRBIG00000044580) #26	KCNG1 (ENSRBIG00000029539) #27	NFATC2 (ENSRBIG00000029008) #28	ATP9A (ENSRBIG00000028855) #29	SALL4 (ENSRBIG00000039876) #30	ZFP64 (ENSRBIG00000019844) #31	ENSRBIG00000044557	TSHZ2 (ENSRBIG00000023205) #32	ENSRBIG00000030503 #33	ZNF217 (ENSRBIG00000044401) #34
Golden snub-nosed monkey	MODERN SPECIES	1077															ENSRROG00000019663	PARD6B (ENSRROG00000043087) #22	BCAS4 (ENSRROG00000044081) #23	ADNP (ENSRROG00000030887) #24	DPM1 (ENSRROG00000036379) #25	MOCS3 (ENSRROG00000006793) #26	KCNG1 (ENSRROG00000035240) #27	NFATC2 (ENSRROG00000043137) #28	ATP9A (ENSRROG00000041159) #29	SALL4 (ENSRROG00000036585) #30	ENSRROG00000039377	ZFP64 (ENSRROG00000042819) #31	TSHZ2 (ENSRROG00000036440) #32	ENSRROG00000014210 #33	ZNF217 (ENSRROG00000045421) #34	BCAS1 (ENSRROG00000029559) #35	CYP24A1 (ENSRROG00000043791) #36
Cercopithecinae	ANCESTRAL SPECIES	19	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34
Vervet Monkey	MODERN SPECIES	11	CSE1L (ENSCSAG00000014977)	STAU1 (ENSCSAG00000014986)	DDX27 (ENSCSAG00000014996) #7	ENSCSAG00000015001 #8	KCNB1 (ENSCSAG00000015005) #10	PTGIS (ENSCSAG00000015010) #11	B4GALT5 (ENSCSAG00000015018) #12	SLC9A8 (ENSCSAG00000015029) #13	SPATA2 (ENSCSAG00000015033) #14	RNF114 (ENSCSAG00000015057) #15	SNAI1 (ENSCSAG00000015065) #16	PEDS1 (ENSCSAG00000015097) #18	CEBPB (ENSCSAG00000018746) #19	PTPN1 (ENSCSAG00000015111) #20	RIPOR3 (ENSCSAG00000015167) #21	PARD6B (ENSCSAG00000015184) #22	BCAS4 (ENSCSAG00000015199) #23	ADNP (ENSCSAG00000015205) #24	DPM1 (ENSCSAG00000015216) #25	MOCS3 (ENSCSAG00000018745) #26	KCNG1 (ENSCSAG00000015218) #27	NFATC2 (ENSCSAG00000015242) #28	ATP9A (ENSCSAG00000015260) #29	SALL4 (ENSCSAG00000015269) #30	ZFP64 (ENSCSAG00000015277) #31	TSHZ2 (ENSCSAG00000018744) #32	ENSCSAG00000018743 #33	ZNF217 (ENSCSAG00000015287) #34	ENSCSAG00000018742	BCAS1 (ENSCSAG00000015313) #35	CYP24A1 (ENSCSAG00000015320) #36
Cercopithecinae_a	ANCESTRAL SPECIES	18	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34
Cercopithecinae_b	ANCESTRAL SPECIES	12	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34
Olive baboon	MODERN SPECIES	7	DDX27 (ENSPANG00000000820) #7	ZNFX1 (ENSPANG00000024121) #8	KCNB1 (ENSPANG00000020914) #10	PTGIS (ENSPANG00000007535) #11	B4GALT5 (ENSPANG00000004894) #12	ENSPANG00000041014	SLC9A8 (ENSPANG00000014247) #13	SPATA2 (ENSPANG00000020781) #14	RNF114 (ENSPANG00000040632) #15	SNAI1 (ENSPANG00000041191) #16	ENSPANG00000040021	PEDS1 (ENSPANG00000011164) #18	CEBPB (ENSPANG00000007537) #19	PTPN1 (ENSPANG00000011165) #20	RIPOR3 (ENSPANG00000020916) #21	PARD6B (ENSPANG00000007538) #22	BCAS4 (ENSPANG00000003915) #23	ADNP (ENSPANG00000021104) #24	DPM1 (ENSPANG00000034110) #25	MOCS3 (ENSPANG00000000373) #26	KCNG1 (ENSPANG00000014248) #27	NFATC2 (ENSPANG00000021791) #28	ATP9A (ENSPANG00000023209) #29	SALL4 (ENSPANG00000021792) #30	ZFP64 (ENSPANG00000021108) #31	TSHZ2 (ENSPANG00000049614) #32	ENSPANG00000004337 #33	ZNF217 (ENSPANG00000020786) #34	ENSPANG00000038001	ENSPANG00000037067	BCAS1 (ENSPANG00000020784) #35
Cercopithecinae_d	ANCESTRAL SPECIES	47					ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00390000018318.u.b.a.b.a.b.e	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33
Drill	MODERN SPECIES	1109						PTGIS (ENSMLEG00000028340) #11	B4GALT5 (ENSMLEG00000033316) #12	SLC9A8 (ENSMLEG00000017126) #13	SPATA2 (ENSMLEG00000038990) #14	RNF114 (ENSMLEG00000030679) #15	SNAI1 (ENSMLEG00000039236) #16	ENSMLEG00000013157 #17	PEDS1 (ENSMLEG00000033014) #18	PTPN1 (ENSMLEG00000026021) #20	RIPOR3 (ENSMLEG00000013091) #21	PARD6B (ENSMLEG00000035752) #22	BCAS4 (ENSMLEG00000006856) #23	ADNP (ENSMLEG00000033499) #24	ENSMLEG00000034105	DPM1 (ENSMLEG00000030857) #25	MOCS3 (ENSMLEG00000027324) #26	KCNG1 (ENSMLEG00000041045) #27
Sooty mangabey	MODERN SPECIES	648			PTGIS (ENSCATG00000013706) #11	B4GALT5 (ENSCATG00000039260) #12	SLC9A8 (ENSCATG00000044367) #13	SPATA2 (ENSCATG00000012860) #14	RNF114 (ENSCATG00000029285) #15	ENSCATG00000035681	SNAI1 (ENSCATG00000041452) #16	ENSCATG00000039056 #17	PEDS1 (ENSCATG00000041753) #18	CEBPB (ENSCATG00000020712) #19	PTPN1 (ENSCATG00000040422) #20	ENSCATG00000039168	RIPOR3 (ENSCATG00000037442) #21	PARD6B (ENSCATG00000006757) #22	BCAS4 (ENSCATG00000041470) #23	ENSCATG00000000447	ADNP (ENSCATG00000044453) #24	DPM1 (ENSCATG00000043688) #25	MOCS3 (ENSCATG00000015208) #26	KCNG1 (ENSCATG00000040592) #27	ENSCATG00000020597	NFATC2 (ENSCATG00000042896) #28	ATP9A (ENSCATG00000044505) #29	SALL4 (ENSCATG00000030757) #30	ENSCATG00000041010	ZFP64 (ENSCATG00000042266) #31	TSHZ2 (ENSCATG00000039930) #32	ENSCATG00000022997 #33	ZNF217 (ENSCATG00000032669) #34
Macaca	ANCESTRAL SPECIES	16	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00940000154319.u.a.d	ENSGT00390000003167 #35
Pig-tailed macaque	MODERN SPECIES	462	ZNFX1 (ENSMNEG00000037146) #8	KCNB1 (ENSMNEG00000020853) #10	PTGIS (ENSMNEG00000036124) #11	B4GALT5 (ENSMNEG00000040159) #12	ENSMNEG00000040706	SLC9A8 (ENSMNEG00000029634) #13	SPATA2 (ENSMNEG00000040643) #14	RNF114 (ENSMNEG00000042308) #15	SNAI1 (ENSMNEG00000036933) #16	ENSMNEG00000044185 #17	PEDS1 (ENSMNEG00000042824) #18	CEBPB (ENSMNEG00000008052) #19	PTPN1 (ENSMNEG00000037262) #20	RIPOR3 (ENSMNEG00000034821) #21	ENSMNEG00000010103	PARD6B (ENSMNEG00000035151) #22	ENSMNEG00000028660 #23	ADNP (ENSMNEG00000042761) #24	DPM1 (ENSMNEG00000034717) #25	MOCS3 (ENSMNEG00000011056) #26	KCNG1 (ENSMNEG00000029109) #27	NFATC2 (ENSMNEG00000034579) #28	ATP9A (ENSMNEG00000023182) #29	SALL4 (ENSMNEG00000035995) #30	ENSMNEG00000034407	ZFP64 (ENSMNEG00000040581) #31	TSHZ2 (ENSMNEG00000040060) #32	ENSMNEG00000028135 #33	ZNF217 (ENSMNEG00000029796) #34	BCAS1 (ENSMNEG00000039962) #35	CYP24A1 (ENSMNEG00000039138) #36
Macaca_a	ANCESTRAL SPECIES	18	ENSGT00550000074884	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00940000159884 #34	ENSGT00940000154319.u.a.d	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696 #37
Rhesus	MODERN SPECIES	1	ENSMMUG00000062795	DDX27 (ENSMMUG00000023621) #7	ZNFX1 (ENSMMUG00000023623) #8	ENSMMUG00000058919	KCNB1 (ENSMMUG00000006442) #10	PTGIS (ENSMMUG00000021692) #11	B4GALT5 (ENSMMUG00000002124) #12	SLC9A8 (ENSMMUG00000002715) #13	SPATA2 (ENSMMUG00000000740) #14	RNF114 (ENSMMUG00000000757) #15	SNAI1 (ENSMMUG00000063295) #16	UBE2V1 (ENSMMUG00000012228) #18	CEBPB (ENSMMUG00000045219) #19	PTPN1 (ENSMMUG00000007878) #20	RIPOR3 (ENSMMUG00000007883) #21	PARD6B (ENSMMUG00000064108) #22	BCAS4 (ENSMMUG00000012127) #23	ADNP (ENSMMUG00000002761) #24	DPM1 (ENSMMUG00000002759) #25	MOCS3 (ENSMMUG00000002758) #26	KCNG1 (ENSMMUG00000000683) #27	NFATC2 (ENSMMUG00000012657) #28	ATP9A (ENSMMUG00000000918) #29	ENSMMUG00000062664	ENSMMUG00000064070	SALL4 (ENSMMUG00000003870) #30	ZFP64 (ENSMMUG00000018846) #31	TSHZ2 (ENSMMUG00000013035) #32	ZNF217 (ENSMMUG00000018358) #34	ENSMMUG00000043345	BCAS1 (ENSMMUG00000020082) #35
Crab-eating macaque	MODERN SPECIES	1	DDX27 (ENSMFAG00000045749) #7	ZNFX1 (ENSMFAG00000040759) #8	KCNB1 (ENSMFAG00000003724) #10	PTGIS (ENSMFAG00000033233) #11	B4GALT5 (ENSMFAG00000037307) #12	ENSMFAG00000063570	SLC9A8 (ENSMFAG00000002040) #13	SPATA2 (ENSMFAG00000041088) #14	RNF114 (ENSMFAG00000001669) #15	SNAI1 (ENSMFAG00000048456) #16	PEDS1 (ENSMFAG00000044984) #18	ENSMFAG00000050903	ENSMFAG00000058174 #19	PTPN1 (ENSMFAG00000033177) #20	RIPOR3 (ENSMFAG00000034413) #21	PARD6B (ENSMFAG00000007135) #22	ENSMFAG00000015516 #23	ENSMFAG00000059434	ENSMFAG00000064118	ADNP (ENSMFAG00000042512) #24	DPM1 (ENSMFAG00000036839) #25	MOCS3 (ENSMFAG00000060225) #26	NFATC2 (ENSMFAG00000044962) #28	ATP9A (ENSMFAG00000001634) #29	ENSMFAG00000054797	SALL4 (ENSMFAG00000027169) #30	ZFP64 (ENSMFAG00000034598) #31	ENSMFAG00000060520	ENSMFAG00000063669	TSHZ2 (ENSMFAG00000044946) #32	ZNF217 (ENSMFAG00000041447) #34
Hominoidea	ANCESTRAL SPECIES	17	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT01090000260115
Gibbon	MODERN SPECIES	3	DDX27 (ENSNLEG00000006961) #7	ZNFX1 (ENSNLEG00000006965) #8	KCNB1 (ENSNLEG00000006970) #10	PTGIS (ENSNLEG00000006971) #11	B4GALT5 (ENSNLEG00000006975) #12	ENSNLEG00000029455	SLC9A8 (ENSNLEG00000006976) #13	SPATA2 (ENSNLEG00000006982) #14	ENSNLEG00000032221	RNF114 (ENSNLEG00000006984) #15	SNAI1 (ENSNLEG00000006985) #16	ENSNLEG00000006987 #17	PEDS1 (ENSNLEG00000029433) #18	ENSNLEG00000030867 #20	RIPOR3 (ENSNLEG00000006989) #21	PARD6B (ENSNLEG00000006993) #22	ENSNLEG00000019226	ENSNLEG00000006994 #23	ADNP (ENSNLEG00000006995) #24	DPM1 (ENSNLEG00000006998) #25	MOCS3 (ENSNLEG00000019227) #26	KCNG1 (ENSNLEG00000007001) #27	ENSNLEG00000019228	NFATC2 (ENSNLEG00000007002) #28	ENSNLEG00000034112	ATP9A (ENSNLEG00000007005) #29	SALL4 (ENSNLEG00000007013) #30	ENSNLEG00000034384	ZFP64 (ENSNLEG00000007015) #31	TSHZ2 (ENSNLEG00000007016) #32	ENSNLEG00000028918 #33
Hominidae	ANCESTRAL SPECIES	18	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	16	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00910000148217	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33
Homo/Pan group	ANCESTRAL SPECIES	17	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00910000148217	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33
Pan	ANCESTRAL SPECIES	15	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000154818.a.b	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00910000148217	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33
Bonobo	MODERN SPECIES	11	DDX27 (ENSPPAG00000035843) #7	ZNFX1 (ENSPPAG00000032191) #8	KCNB1 (ENSPPAG00000030007) #10	PTGIS (ENSPPAG00000042097) #11	B4GALT5 (ENSPPAG00000029604) #12	ENSPPAG00000037544	SLC9A8 (ENSPPAG00000035233) #13	SPATA2 (ENSPPAG00000028008) #14	RNF114 (ENSPPAG00000043607) #15	SNAI1 (ENSPPAG00000041096) #16	ENSPPAG00000028780 #17	PEDS1 (ENSPPAG00000028727) #18	PTPN1 (ENSPPAG00000027528) #20	RIPOR3 (ENSPPAG00000033751) #21	ENSPPAG00000029645	PARD6B (ENSPPAG00000038274) #22	ENSPPAG00000031066 #23	ADNP (ENSPPAG00000035684) #24	ENSPPAG00000035180	ENSPPAG00000038880	DPM1 (ENSPPAG00000042946) #25	MOCS3 (ENSPPAG00000008891) #26	KCNG1 (ENSPPAG00000032019) #27	NFATC2 (ENSPPAG00000040722) #28	ENSPPAG00000042667	ATP9A (ENSPPAG00000030836) #29	SALL4 (ENSPPAG00000038064) #30	ZFP64 (ENSPPAG00000028816) #31	ENSPPAG00000040778	TSHZ2 (ENSPPAG00000031686) #32	ENSPPAG00000032773 #33
Chimpanzee	MODERN SPECIES	11	ZNFX1 (ENSPTRG00000013603) #8	KCNB1 (ENSPTRG00000013607) #10	PTGIS (ENSPTRG00000013608) #11	B4GALT5 (ENSPTRG00000013609) #12	ENSPTRG00000043814	SLC9A8 (ENSPTRG00000023101) #13	SPATA2 (ENSPTRG00000013611) #14	RNF114 (ENSPTRG00000013613) #15	SNAI1 (ENSPTRG00000050285) #16	UBE2V1 (ENSPTRG00000013615) #17	PEDS1 (ENSPTRG00000040435) #18	CEBPB (ENSPTRG00000048989) #19	PTPN1 (ENSPTRG00000023575) #20	RIPOR3 (ENSPTRG00000013619) #21	ENSPTRG00000050570	PARD6B (ENSPTRG00000013620) #22	BCAS4 (ENSPTRG00000013621) #23	ADNP (ENSPTRG00000013623) #24	ENSPTRG00000048134	ENSPTRG00000045082	DPM1 (ENSPTRG00000013625) #25	MOCS3 (ENSPTRG00000013626) #26	KCNG1 (ENSPTRG00000013627) #27	NFATC2 (ENSPTRG00000013628) #28	ENSPTRG00000052402	ATP9A (ENSPTRG00000013629) #29	SALL4 (ENSPTRG00000013631) #30	ZFP64 (ENSPTRG00000013632) #31	ENSPTRG00000052453	TSHZ2 (ENSPTRG00000013634) #32	ENSPTRG00000044495 #33
Human	MODERN SPECIES	12	DDX27 (ENSG00000124228) #7	ZNFX1 (ENSG00000124201) #8	KCNB1 (ENSG00000158445) #10	PTGIS (ENSG00000124212) #11	B4GALT5 (ENSG00000158470) #12	SLC9A8 (ENSG00000197818) #13	SPATA2 (ENSG00000158480) #14	RNF114 (ENSG00000124226) #15	SNAI1 (ENSG00000124216) #16	UBE2V1 (ENSG00000244687)	PEDS1-UBE2V1 (ENSG00000124208)	PEDS1 (ENSG00000240849) #18	CEBPB (ENSG00000172216) #19	PTPN1 (ENSG00000196396) #20	RIPOR3 (ENSG00000042062) #21	PARD6B (ENSG00000124171) #22	BCAS4 (ENSG00000124243) #23	ADNP (ENSG00000101126) #24	DPM1 (ENSG00000000419) #25	MOCS3 (ENSG00000124217) #26	KCNG1 (ENSG00000026559) #27	NFATC2 (ENSG00000101096) #28	ATP9A (ENSG00000054793) #29	SALL4 (ENSG00000101115) #30	ZFP64 (ENSG00000020256) #31	TSHZ2 (ENSG00000182463) #32	ZNF217 (ENSG00000171940) #34	BCAS1 (ENSG00000064787) #35	CYP24A1 (ENSG00000019186) #36	PFDN4 (ENSG00000101132) #37	DOK5 (ENSG00000101134)
Gorilla	MODERN SPECIES	11	ENSGGOG00000015474 #7	ZNFX1 (ENSGGOG00000008501) #8	KCNB1 (ENSGGOG00000006890) #10	B4GALT5 (ENSGGOG00000042822) #12	ENSGGOG00000043763	ENSGGOG00000039936	SLC9A8 (ENSGGOG00000001956) #13	SPATA2 (ENSGGOG00000027397) #14	RNF114 (ENSGGOG00000028049) #15	SNAI1 (ENSGGOG00000024422) #16	ENSGGOG00000040133 #17	PEDS1 (ENSGGOG00000015114) #18	CEBPB (ENSGGOG00000043045) #19	PTPN1 (ENSGGOG00000007036) #20	RIPOR3 (ENSGGOG00000007043) #21	PARD6B (ENSGGOG00000010338) #22	ENSGGOG00000025933 #23	ADNP (ENSGGOG00000003120) #24	ENSGGOG00000040026	ENSGGOG00000038274	DPM1 (ENSGGOG00000008993) #25	MOCS3 (ENSGGOG00000008999) #26	KCNG1 (ENSGGOG00000000844) #27	NFATC2 (ENSGGOG00000024518) #28	ENSGGOG00000040795	ATP9A (ENSGGOG00000016586) #29	SALL4 (ENSGGOG00000001832) #30	ZFP64 (ENSGGOG00000012030) #31	ENSGGOG00000026918	TSHZ2 (ENSGGOG00000005282) #32	ENSGGOG00000043241 #33
Orangutan	MODERN SPECIES	11	CSE1L (ENSPPYG00000011110)	STAU1 (ENSPPYG00000011111)	DDX27 (ENSPPYG00000011113) #7	ZNFX1 (ENSPPYG00000011114) #8	KCNB1 (ENSPPYG00000011116) #10	PTGIS (ENSPPYG00000011117) #11	B4GALT5 (ENSPPYG00000011118) #12	SLC9A8 (ENSPPYG00000011119) #13	SPATA2 (ENSPPYG00000011120) #14	RNF114 (ENSPPYG00000011121) #15	SNAI1 (ENSPPYG00000011122) #16	UBE2V1 (ENSPPYG00000011123) #18	CEBPB (ENSPPYG00000011124) #19	PTPN1 (ENSPPYG00000011126) #20	RIPOR3 (ENSPPYG00000011127) #21	PARD6B (ENSPPYG00000038640) #22	ENSPPYG00000037475 #23	ENSPPYG00000030749	ADNP (ENSPPYG00000011130) #24	DPM1 (ENSPPYG00000011131) #25	MOCS3 (ENSPPYG00000011132) #26	KCNG1 (ENSPPYG00000011133) #27	NFATC2 (ENSPPYG00000011135) #28	ENSPPYG00000011136 #29	SALL4 (ENSPPYG00000011138) #30	ENSPPYG00000019918	ZFP64 (ENSPPYG00000011139) #31	TSHZ2 (ENSPPYG00000011269) #32	ENSPPYG00000037756 #33	ZNF217 (ENSPPYG00000011140) #34	BCAS1 (ENSPPYG00000011142) #35
Platyrrhini	ANCESTRAL SPECIES	11	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041.c.a #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884.a #34	ENSGT00940000154319.u.a
Mas night monkey	MODERN SPECIES	1347	ENSANAG00000006331	DDX27 (ENSANAG00000036257) #7	ZNFX1 (ENSANAG00000034022) #8	KCNB1 (ENSANAG00000035917) #10	PTGIS (ENSANAG00000038517) #11	B4GALT5 (ENSANAG00000036885) #12	SLC9A8 (ENSANAG00000029813) #13	SPATA2 (ENSANAG00000033405) #14	ENSANAG00000022297 #15	SNAI1 (ENSANAG00000028666) #16	ENSANAG00000038531 #17	PEDS1 (ENSANAG00000027579) #18	CEBPB (ENSANAG00000026101) #19	ENSANAG00000030593 #20	RIPOR3 (ENSANAG00000024708) #21	PARD6B (ENSANAG00000024355) #22	BCAS4 (ENSANAG00000036456) #23	ADNP (ENSANAG00000035777) #24	ENSANAG00000026501	DPM1 (ENSANAG00000030552) #25	MOCS3 (ENSANAG00000003316) #26	KCNG1 (ENSANAG00000036536) #27	NFATC2 (ENSANAG00000034927) #28	ATP9A (ENSANAG00000032631) #29	SALL4 (ENSANAG00000023352) #30	ZFP64 (ENSANAG00000034694) #31	TSHZ2 (ENSANAG00000038357) #32	ENSANAG00000005571 #33	ENSANAG00000036769 #34	ENSANAG00000028551	BCAS1 (ENSANAG00000019184) #35
Cebidae	ANCESTRAL SPECIES	13	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041.c.a #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884.a #34	ENSGT00940000154319.u.a	ENSGT00390000003167 #35
Marmoset	MODERN SPECIES	17	STAU1 (ENSCJAG00000016233)	DDX27 (ENSCJAG00000016135) #7	ZNFX1 (ENSCJAG00000016115) #8	KCNB1 (ENSCJAG00000022600) #10	PTGIS (ENSCJAG00000000578) #11	B4GALT5 (ENSCJAG00000038408) #12	SLC9A8 (ENSCJAG00000000466) #13	SPATA2 (ENSCJAG00000041816) #14	RNF114 (ENSCJAG00000000510) #15	SNAI1 (ENSCJAG00000073906) #16	UBE2V1 (ENSCJAG00000039715) #17	PEDS1 (ENSCJAG00000072528) #18	CEBPB (ENSCJAG00000038265) #19	ENSCJAG00000000531 #20	RIPOR3 (ENSCJAG00000000534) #21	PARD6B (ENSCJAG00000044244) #22	BCAS4 (ENSCJAG00000000562) #23	ADNP (ENSCJAG00000000563) #24	DPM1 (ENSCJAG00000000551) #25	MOCS3 (ENSCJAG00000023186) #26	KCNG1 (ENSCJAG00000000570) #27	NFATC2 (ENSCJAG00000000574) #28	ATP9A (ENSCJAG00000000586) #29	ENSCJAG00000000591 #30	ZFP64 (ENSCJAG00000000596) #31	TSHZ2 (ENSCJAG00000000609) #32	ENSCJAG00000040137 #33	ENSCJAG00000076838	ZNF217 (ENSCJAG00000000615) #34	ENSCJAG00000075669	ENSCJAG00000081777
Cebidae_a	ANCESTRAL SPECIES	2	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041.d #20	ENSGT00940000158041.c.a #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884.a #34	ENSGT00940000154319.u.a	ENSGT00390000003167 #35
Capuchin	MODERN SPECIES	224														PTPN1 (ENSCCAG00000023451) #20	RIPOR3 (ENSCCAG00000031037) #21	PARD6B (ENSCCAG00000025810) #22	BCAS4 (ENSCCAG00000022933) #23	ADNP (ENSCCAG00000034384) #24	DPM1 (ENSCCAG00000027064) #25	MOCS3 (ENSCCAG00000032344) #26	KCNG1 (ENSCCAG00000034975) #27	NFATC2 (ENSCCAG00000025112) #28	ENSCCAG00000031561	ATP9A (ENSCCAG00000027234) #29	ENSCCAG00000029512 #30	ZFP64 (ENSCCAG00000033968) #31	TSHZ2 (ENSCCAG00000021876) #32	ENSCCAG00000020419 #33	ENSCCAG00000034411 #34	ENSCCAG00000025469	BCAS1 (ENSCCAG00000033293) #35
Bolivian squirrel monkey	MODERN SPECIES	93	ENSSBOG00000001880	DDX27 (ENSSBOG00000034281) #7	ZNFX1 (ENSSBOG00000024677) #8	KCNB1 (ENSSBOG00000030068) #10	PTGIS (ENSSBOG00000032693) #11	B4GALT5 (ENSSBOG00000012698) #12	ENSSBOG00000030451	SLC9A8 (ENSSBOG00000008701) #13	SPATA2 (ENSSBOG00000027105) #14	RNF114 (ENSSBOG00000027055) #15	SNAI1 (ENSSBOG00000034760) #16	ENSSBOG00000028538 #17	PEDS1 (ENSSBOG00000000313) #18	ENSSBOG00000021238 #20	RIPOR3 (ENSSBOG00000020304) #21	PARD6B (ENSSBOG00000033004) #22	BCAS4 (ENSSBOG00000031019) #23	ADNP (ENSSBOG00000031931) #24	DPM1 (ENSSBOG00000035012) #25	MOCS3 (ENSSBOG00000016142) #26	KCNG1 (ENSSBOG00000030989) #27	NFATC2 (ENSSBOG00000023445) #28	ENSSBOG00000020755	ATP9A (ENSSBOG00000018293) #29	SALL4 (ENSSBOG00000030011) #30	ZFP64 (ENSSBOG00000026654) #31	TSHZ2 (ENSSBOG00000024081) #32	ENSSBOG00000018726 #33	ZNF217 (ENSSBOG00000023737) #34	ENSSBOG00000017716	BCAS1 (ENSSBOG00000027776) #35
Euarchontoglires_A	ANCESTRAL SPECIES	16	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854	ENSGT00940000163703.a	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36
Tree shrew	MODERN SPECIES	4354															ENSTBEG00000001382 #21	PARD6B (ENSTBEG00000002270) #22	BCAS4 (ENSTBEG00000002498) #23	ADNP (ENSTBEG00000002890) #24	DPM1 (ENSTBEG00000003795) #25
Glires	ANCESTRAL SPECIES	17	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854	ENSGT00940000163703.a	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36
Rodentia	ANCESTRAL SPECIES	18	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854	ENSGT00940000163703.a	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36
Rodentia_A	ANCESTRAL SPECIES	17	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36
Hystricomorpha	ANCESTRAL SPECIES	10	ENSGT00940000157304.i.a	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36
Naked mole-rat female	MODERN SPECIES	6	ZNFX1 (ENSHGLG00000008068) #8	ENSHGLG00000049086	KCNB1 (ENSHGLG00000038195) #10	PTGIS (ENSHGLG00000007083) #11	B4GALT5 (ENSHGLG00000006719) #12	SLC9A8 (ENSHGLG00000006337) #13	SPATA2 (ENSHGLG00000000487) #14	RNF114 (ENSHGLG00000005669) #15	SNAI1 (ENSHGLG00000005310) #16	ENSHGLG00000049806 #17	PEDS1 (ENSHGLG00000005163) #18	ENSHGLG00000042761 #19	PTPN1 (ENSHGLG00000005082) #20	ENSHGLG00000012434	RIPOR3 (ENSHGLG00000012260) #21	PARD6B (ENSHGLG00000012058) #22	ENSHGLG00000034848 #23	ADNP (ENSHGLG00000011922) #24	ENSHGLG00000011694 #25	MOCS3 (ENSHGLG00000020809) #26	KCNG1 (ENSHGLG00000011040) #27	NFATC2 (ENSHGLG00000010406) #28	ENSHGLG00000044936	ATP9A (ENSHGLG00000009412) #29	SALL4 (ENSHGLG00000009043) #30	ENSHGLG00000044690	ENSHGLG00000008937	ENSHGLG00000033028 #31	ENSHGLG00000049099 #32	ENSHGLG00000050175	ENSHGLG00000048236 #33
Hystricomorpha_a	ANCESTRAL SPECIES	8	ENSGT00940000157304.j	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696.ac.a #37
Guinea pig	MODERN SPECIES	96														PTPN1 (ENSCPOG00000033436) #20	RIPOR3 (ENSCPOG00000010650) #21	PARD6B (ENSCPOG00000021603) #22	ADNP (ENSCPOG00000001591) #24	DPM1 (ENSCPOG00000033471) #25	MOCS3 (ENSCPOG00000026680) #26	KCNG1 (ENSCPOG00000015203) #27	NFATC2 (ENSCPOG00000012743) #28	ATP9A (ENSCPOG00000012747) #29	ENSCPOG00000038489 #30	ENSCPOG00000036300 #30	ZFP64 (ENSCPOG00000025271) #31	TSHZ2 (ENSCPOG00000002986) #32	ENSCPOG00000038107 #33	ZNF217 (ENSCPOG00000027399) #34	BCAS1 (ENSCPOG00000009194) #35	CYP24A1 (ENSCPOG00000010077) #36	ENSCPOG00000032848 #37
Hystricomorpha_b	ANCESTRAL SPECIES	16	ENSGT00940000157304.j	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696.ac.a.b #37
Degu	MODERN SPECIES	118	STAU1 (ENSODEG00000006523)	DDX27 (ENSODEG00000006281) #7	ZNFX1 (ENSODEG00000006490) #8	KCNB1 (ENSODEG00000007239) #10	PTGIS (ENSODEG00000006946) #11	ENSODEG00000006524 #12	SLC9A8 (ENSODEG00000007225) #13	SPATA2 (ENSODEG00000006882) #14	RNF114 (ENSODEG00000006139) #15	SNAI1 (ENSODEG00000007856) #16	ENSODEG00000006622 #17	PEDS1 (ENSODEG00000006093) #18	CEBPB (ENSODEG00000007763) #19	PTPN1 (ENSODEG00000009073) #20	RIPOR3 (ENSODEG00000005970) #21	PARD6B (ENSODEG00000005877) #22	ADNP (ENSODEG00000007210) #24	ENSODEG00000006312 #25	MOCS3 (ENSODEG00000019332) #26	KCNG1 (ENSODEG00000005905) #27	ENSODEG00000007977	NFATC2 (ENSODEG00000006560) #28	ATP9A (ENSODEG00000006908) #29	ENSODEG00000006762 #30	ENSODEG00000006564	ZFP64 (ENSODEG00000005735) #31	ENSODEG00000019550 #32	ENSODEG00000019595 #33	ZNF217 (ENSODEG00000006753) #34	ENSODEG00000006282	CYP24A1 (ENSODEG00000005827) #36
Long-tailed chinchilla	MODERN SPECIES	152	ENSCLAG00000006516	DDX27 (ENSCLAG00000008075) #7	ZNFX1 (ENSCLAG00000006567) #8	KCNB1 (ENSCLAG00000005669) #10	PTGIS (ENSCLAG00000005501) #11	B4GALT5 (ENSCLAG00000006323) #12	SLC9A8 (ENSCLAG00000004548) #13	SPATA2 (ENSCLAG00000017362) #14	RNF114 (ENSCLAG00000012925) #15	SNAI1 (ENSCLAG00000012285) #16	ENSCLAG00000006741 #17	PEDS1 (ENSCLAG00000005635) #18	ENSCLAG00000006078	PTPN1 (ENSCLAG00000005789) #20	RIPOR3 (ENSCLAG00000004580) #21	PARD6B (ENSCLAG00000009267) #22	BCAS4 (ENSCLAG00000009069) #23	ENSCLAG00000013494	ADNP (ENSCLAG00000012575) #24	ENSCLAG00000016153 #25	MOCS3 (ENSCLAG00000017807) #26	KCNG1 (ENSCLAG00000006678) #27	NFATC2 (ENSCLAG00000006467) #28	ATP9A (ENSCLAG00000010633) #29	SALL4 (ENSCLAG00000010479) #30	ZFP64 (ENSCLAG00000008329) #31	TSHZ2 (ENSCLAG00000009630) #32	ENSCLAG00000017696 #33	ENSCLAG00000006928 #34	BCAS1 (ENSCLAG00000006299) #35	CYP24A1 (ENSCLAG00000006942) #36
Sciuridae	ANCESTRAL SPECIES	13	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B.k #25	ENSGT00940000153481.B.l #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	3	ENSSVLG00005020751	ENSSVLG00005020782	ENSSVLG00005020823	ENSSVLG00005020855	ENSSVLG00005020890	ENSSVLG00005020924	ENSSVLG00005020973	ENSSVLG00005020985	ENSSVLG00005021014	ENSSVLG00005021055	ENSSVLG00005021066	ENSSVLG00005021091	ENSSVLG00005021128	ENSSVLG00005021177	ENSSVLG00005021226	ENSSVLG00005021275 #22	ENSSVLG00005021299	ENSSVLG00005021338	ENSSVLG00005021359	FZD8 (ENSSVLG00005021417)	GJD4 (ENSSVLG00005021504)	CCNY (ENSSVLG00005021552)	ENSSVLG00005021670	ENSSVLG00005021688	CREM (ENSSVLG00005021874)	CUL2 (ENSSVLG00005022796)	PARD3 (ENSSVLG00005022949)	ENSSVLG00005023205	ENSSVLG00005023228	NRP1 (ENSSVLG00005023267)	ITGB1 (ENSSVLG00005023311)
Eurasian red squirrel	MODERN SPECIES	11	STAU1 (ENSSVLG00005004230)	DDX27 (ENSSVLG00005004272) #7	ZNFX1 (ENSSVLG00005004315) #8	KCNB1 (ENSSVLG00005004367) #10	PTGIS (ENSSVLG00005004394) #11	B4GALT5 (ENSSVLG00005004427) #12	SLC9A8 (ENSSVLG00005004467) #13	SPATA2 (ENSSVLG00005004527) #14	RNF114 (ENSSVLG00005004552) #15	SNAI1 (ENSSVLG00005004568) #16	UBE2V1 (ENSSVLG00005004590)	ENSSVLG00005004618	CEBPB (ENSSVLG00005004641) #19	PTPN1 (ENSSVLG00005000174) #20	RIPOR3 (ENSSVLG00005000232) #21	ENSSVLG00005000290 #22	ENSSVLG00005000318	BCAS4 (ENSSVLG00005000345) #23	ADNP (ENSSVLG00005000370) #24	DPM1 (ENSSVLG00005000398) #25	MOCS3 (ENSSVLG00005000434) #26	KCNG1 (ENSSVLG00005000448) #27	NFATC2 (ENSSVLG00005000511) #28	ATP9A (ENSSVLG00005000658) #29	SALL4 (ENSSVLG00005000729) #30	ENSSVLG00005000761	ZFP64 (ENSSVLG00005000833) #31	TSHZ2 (ENSSVLG00005000893) #32	ENSSVLG00005000915	ENSSVLG00005000930 #33	ZNF217 (ENSSVLG00005000945) #34
Marmotini	ANCESTRAL SPECIES	5	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041.e #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B.l #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696 #37
Alpin marmot	MODERN SPECIES		STAU1 (ENSMMMG00000007273)	ENSMMMG00000007315	DDX27 (ENSMMMG00000007319) #7	ZNFX1 (ENSMMMG00000007354) #8	KCNB1 (ENSMMMG00000007399) #10	PTGIS (ENSMMMG00000007402) #11	B4GALT5 (ENSMMMG00000007414) #12	SLC9A8 (ENSMMMG00000007474) #13	SPATA2 (ENSMMMG00000007555) #14	ENSMMMG00000007564	RNF114 (ENSMMMG00000007568) #15	SNAI1 (ENSMMMG00000007619) #16	UBE2V1 (ENSMMMG00000007630)	ENSMMMG00000007699 #20	RIPOR3 (ENSMMMG00000007709) #21	PARD6B (ENSMMMG00000007746) #22	ADNP (ENSMMMG00000007757) #24	ENSMMMG00000007768 #25	MOCS3 (ENSMMMG00000007809) #26	KCNG1 (ENSMMMG00000007813) #27	ENSMMMG00000007852 #28	ATP9A (ENSMMMG00000007891) #29	SALL4 (ENSMMMG00000008074) #30	ZFP64 (ENSMMMG00000008125) #31	TSHZ2 (ENSMMMG00000008206) #32	ENSMMMG00000008228 #33	ZNF217 (ENSMMMG00000008233) #34	BCAS1 (ENSMMMG00000008267) #35	CYP24A1 (ENSMMMG00000008409) #36	PFDN4 (ENSMMMG00000008431) #37	DOK5 (ENSMMMG00000008468)
Marmotini_b	ANCESTRAL SPECIES	25	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041.e #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B.l #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696 #37
Squirrel	MODERN SPECIES	114	CSE1L (ENSSTOG00000003600)	STAU1 (ENSSTOG00000003634)	DDX27 (ENSSTOG00000003645) #7	ZNFX1 (ENSSTOG00000028176) #8	KCNB1 (ENSSTOG00000026242) #10	PTGIS (ENSSTOG00000019624) #11	B4GALT5 (ENSSTOG00000003851) #12	SLC9A8 (ENSSTOG00000027124) #13	SPATA2 (ENSSTOG00000025224) #14	RNF114 (ENSSTOG00000005727) #15	SNAI1 (ENSSTOG00000005866) #16	ENSSTOG00000014322 #17	PEDS1 (ENSSTOG00000016416) #18	ENSSTOG00000025542 #20	RIPOR3 (ENSSTOG00000023513) #21	PARD6B (ENSSTOG00000009330) #22	ADNP (ENSSTOG00000023722) #24	ENSSTOG00000014659 #25	MOCS3 (ENSSTOG00000026585) #26	KCNG1 (ENSSTOG00000000015) #27	NFATC2 (ENSSTOG00000013460) #28	ATP9A (ENSSTOG00000024149) #29	SALL4 (ENSSTOG00000025002) #30	ZFP64 (ENSSTOG00000019989) #31	TSHZ2 (ENSSTOG00000008373) #32	ZNF217 (ENSSTOG00000013807) #34	BCAS1 (ENSSTOG00000028914) #35	CYP24A1 (ENSSTOG00000001968) #36	PFDN4 (ENSSTOG00000028253) #37	DOK5 (ENSSTOG00000028767)
Arctic ground squirrel	MODERN SPECIES	83	STAU1 (ENSUPAG00010022006)	DDX27 (ENSUPAG00010022011) #7	ZNFX1 (ENSUPAG00010022013) #8	KCNB1 (ENSUPAG00010000021) #10	PTGIS (ENSUPAG00010000049) #11	B4GALT5 (ENSUPAG00010000085) #12	SLC9A8 (ENSUPAG00010000132) #13	SPATA2 (ENSUPAG00010000256) #14	RNF114 (ENSUPAG00010000271) #15	SNAI1 (ENSUPAG00010000283) #16	ENSUPAG00010000293 #17	ENSUPAG00010000318	CEBPB (ENSUPAG00010000335) #19	ENSUPAG00010000358 #20	RIPOR3 (ENSUPAG00010000410) #21	PARD6B (ENSUPAG00010000463) #22	ENSUPAG00010000474 #23	ADNP (ENSUPAG00010000496) #24	ENSUPAG00010000511 #25	MOCS3 (ENSUPAG00010000719) #26	KCNG1 (ENSUPAG00010000726) #27	NFATC2 (ENSUPAG00010000747) #28	ATP9A (ENSUPAG00010000794) #29	SALL4 (ENSUPAG00010000889) #30	ZFP64 (ENSUPAG00010000898) #31	TSHZ2 (ENSUPAG00010000932) #32	ENSUPAG00010000940 #33	ZNF217 (ENSUPAG00010000948) #34	BCAS1 (ENSUPAG00010000967) #35	CYP24A1 (ENSUPAG00010001072) #36	ENSUPAG00010001098 #37
Rodentia_B	ANCESTRAL SPECIES	13	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696 #37	ENSGT00940000160725
Myomorpha	ANCESTRAL SPECIES	9	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696 #37	ENSGT00940000160725
Muroidea	ANCESTRAL SPECIES	7	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696 #37	ENSGT00940000160725
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696 #37	ENSGT00940000160725
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696 #37	ENSGT00940000160725
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696 #37	ENSGT00940000160725
Golden Hamster	MODERN SPECIES	664	Cse1l (ENSMAUG00000001362)	Stau1 (ENSMAUG00000013846)	Ddx27 (ENSMAUG00000000552) #7	Znfx1 (ENSMAUG00000016416) #8	Kcnb1 (ENSMAUG00000019058) #10	Ptgis (ENSMAUG00000016166) #11	B4galt5 (ENSMAUG00000015144) #12	Slc9a8 (ENSMAUG00000018259) #13	Spata2 (ENSMAUG00000020910) #14	Rnf114 (ENSMAUG00000019385) #15	Snai1 (ENSMAUG00000021592) #16	Ube2v1 (ENSMAUG00000020962)	Peds1 (ENSMAUG00000016961) #18	Ptpn1 (ENSMAUG00000010010) #20	Ripor3 (ENSMAUG00000010157) #21	Pard6b (ENSMAUG00000010497) #22	Adnp (ENSMAUG00000020819) #24	Dpm1 (ENSMAUG00000016233) #25	Mocs3 (ENSMAUG00000007351) #26	Kcng1 (ENSMAUG00000015676) #27	Nfatc2 (ENSMAUG00000011773) #28	Atp9a (ENSMAUG00000004916) #29	Sall4 (ENSMAUG00000015814) #30	Zfp64 (ENSMAUG00000015438) #31	ENSMAUG00000003995 #32	ENSMAUG00000015308 #35	Cyp24a1 (ENSMAUG00000013246) #36	Pfdn4 (ENSMAUG00000002277) #37	ENSMAUG00000001483	Cbln4 (ENSMAUG00000013556)	Mc3r (ENSMAUG00000006998)
Chinese hamster chok1gshd	MODERN SPECIES	195	Stau1 (ENSCGRG00001013453)	Ddx27 (ENSCGRG00001015330) #7	Znfx1 (ENSCGRG00001017355) #8	Kcnb1 (ENSCGRG00001019221) #10	Ptgis (ENSCGRG00001019919) #11	B4galt5 (ENSCGRG00001021312) #12	Slc9a8 (ENSCGRG00001022939) #13	Spata2 (ENSCGRG00001005279) #14	Rnf114 (ENSCGRG00001006890) #15	Snai1 (ENSCGRG00001007749) #16	Ube2v1 (ENSCGRG00001009565)	Peds1 (ENSCGRG00001010523) #18	Cebpb (ENSCGRG00001001737) #19	Ptpn1 (ENSCGRG00001012267) #20	Ripor3 (ENSCGRG00001013099) #21	Pard6b (ENSCGRG00001014206) #22	Adnp (ENSCGRG00001004111) #24	Dpm1 (ENSCGRG00001007175) #25	Mocs3 (ENSCGRG00001003680) #26	Kcng1 (ENSCGRG00001009827) #27	Nfatc2 (ENSCGRG00001012491) #28	Atp9a (ENSCGRG00001017172) #29	Sall4 (ENSCGRG00001019569) #30	Zfp64 (ENSCGRG00001020443) #31	ENSCGRG00001015533	Tshz2 (ENSCGRG00001000496) #32	ENSCGRG00001007530 #33	Zfp217 (ENSCGRG00001002600) #34	Bcas1 (ENSCGRG00001007157) #35	Cyp24a1 (ENSCGRG00001010160) #36	Pfdn4 (ENSCGRG00001010542) #37
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696 #37	ENSGT00940000160725
Prairie vole	MODERN SPECIES	357	Stau1 (ENSMOCG00000018743)	Ddx27 (ENSMOCG00000019594) #7	Znfx1 (ENSMOCG00000005411) #8	Kcnb1 (ENSMOCG00000001197) #10	Ptgis (ENSMOCG00000012430) #11	B4galt5 (ENSMOCG00000011995) #12	Slc9a8 (ENSMOCG00000004864) #13	Spata2 (ENSMOCG00000017632) #14	Rnf114 (ENSMOCG00000015529) #15	Snai1 (ENSMOCG00000007847) #16	Ube2v1 (ENSMOCG00000012071)	Peds1 (ENSMOCG00000010275) #18	Cebpb (ENSMOCG00000010607) #19	Ptpn1 (ENSMOCG00000001636) #20	Ripor3 (ENSMOCG00000010739) #21	Pard6b (ENSMOCG00000003321) #22	ENSMOCG00000001467 #24	Dpm1 (ENSMOCG00000015289) #25	Mocs3 (ENSMOCG00000003624) #26	Kcng1 (ENSMOCG00000009238) #27	Nfatc2 (ENSMOCG00000000259) #28	Atp9a (ENSMOCG00000016994) #29	Sall4 (ENSMOCG00000018245) #30	Zfp64 (ENSMOCG00000004895) #31	ENSMOCG00000013704 #32	Zfp217 (ENSMOCG00000018704) #34	Bcas1 (ENSMOCG00000004294) #35	Cyp24a1 (ENSMOCG00000016929) #36	ENSMOCG00000000248	ENSMOCG00000013934	Dok5 (ENSMOCG00000006196)
Northern American deer mouse	MODERN SPECIES	17	Cse1l (ENSPEMG00000000944)	Stau1 (ENSPEMG00000022045)	Ddx27 (ENSPEMG00000023215) #7	Znfx1 (ENSPEMG00000008042) #8	ENSPEMG00000001839	Ptgis (ENSPEMG00000018632) #11	ENSPEMG00000000220	Slc9a8 (ENSPEMG00000022094) #13	Spata2 (ENSPEMG00000027358) #14	ENSPEMG00000023570	Snai1 (ENSPEMG00000023213) #16	ENSPEMG00000001442	Peds1 (ENSPEMG00000006010) #18	Ptpn1 (ENSPEMG00000012811) #20	Ripor3 (ENSPEMG00000011182) #21	Pard6b (ENSPEMG00000015881) #22	Adnp (ENSPEMG00000028284) #24	Dpm1 (ENSPEMG00000022392) #25	ENSPEMG00000023371 #26	Kcng1 (ENSPEMG00000021560) #27	Nfatc2 (ENSPEMG00000022457) #28	ENSPEMG00000028160	Atp9a (ENSPEMG00000022700) #29	Sall4 (ENSPEMG00000022706) #30	Zfp64 (ENSPEMG00000014980) #31	ENSPEMG00000014233	Tshz2 (ENSPEMG00000029085) #32	ENSPEMG00000029761 #33	Zfp217 (ENSPEMG00000011097) #34	Bcas1 (ENSPEMG00000000354) #35	Cyp24a1 (ENSPEMG00000014776) #36
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696 #37	ENSGT00940000160725
Mus	ANCESTRAL SPECIES	1	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696 #37	ENSGT01090000262946
Mus_A	ANCESTRAL SPECIES		ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #24	ENSGT00940000153481.B.g.b #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696 #37	ENSGT01090000262946
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #24	ENSGT00940000153481.B.g.b #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696 #37	ENSGT00940000160725
Mouse	MODERN SPECIES	11	Ddx27 (ENSMUSG00000017999) #7	Znfx1 (ENSMUSG00000039501) #8	Kcnb1 (ENSMUSG00000050556) #10	Ptgis (ENSMUSG00000017969) #11	B4galt5 (ENSMUSG00000017929) #12	Slc9a8 (ENSMUSG00000039463) #13	Spata2 (ENSMUSG00000047030) #14	Rnf114 (ENSMUSG00000006418) #15	Snai1 (ENSMUSG00000042821) #16	Ube2v1 (ENSMUSG00000078923)	Gm20431 (ENSMUSG00000089739)	Peds1 (ENSMUSG00000090213) #18	Cebpb (ENSMUSG00000056501) #19	Ptpn1 (ENSMUSG00000027540) #20	Ripor3 (ENSMUSG00000074577) #21	Pard6b (ENSMUSG00000044641) #22	Adnp (ENSMUSG00000051149) #24	Dpm1 (ENSMUSG00000078919) #25	Mocs3 (ENSMUSG00000074576) #26	Kcng1 (ENSMUSG00000074575) #27	Nfatc2 (ENSMUSG00000027544) #28	Atp9a (ENSMUSG00000027546) #29	Sall4 (ENSMUSG00000027547) #30	Zfp64 (ENSMUSG00000027551) #31	Tshz2 (ENSMUSG00000047907) #32	Zfp217 (ENSMUSG00000052056) #34	Bcas1 (ENSMUSG00000013523) #35	Cyp24a1 (ENSMUSG00000038567) #36	Pfdn4 (ENSMUSG00000052033) #37	Dok5 (ENSMUSG00000027560)	Cbln4 (ENSMUSG00000067578)
Mus_C	ANCESTRAL SPECIES	1	ENSGT00700000106212	ENSGT00390000008325.b.b ##9	ENSGT00940000155268	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #24	ENSGT00940000153481.B.g.b #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660 #33	ENSGT00940000159884 #34	ENSGT00390000003167 #35	ENSGT00950000182905.b #36	ENSGT00390000006696 #37	ENSGT01090000262956
Steppe mouse	MODERN SPECIES	2968	ENSMSIG00000031338	Kcnb1 (ENSMSIG00000031340) #10	Ptgis (ENSMSIG00000031341) #11	B4galt5 (ENSMSIG00000031348) #12	Slc9a8 (ENSMSIG00000031352) #13	ENSMSIG00000031374 #14	Rnf114 (ENSMSIG00000031377) #15	ENSMSIG00000031378	ENSMSIG00000031380	Snai1 (ENSMSIG00000031381) #16	Ube2v1 (ENSMSIG00000031383)	ENSMSIG00000031391 #19	ENSMSIG00000031393	Ptpn1 (ENSMSIG00000031396) #20	Ripor3 (ENSMSIG00000031399) #21	Pard6b (ENSMSIG00000031403) #22	Adnp (ENSMSIG00000031404) #24	ENSMSIG00000031406 #25	Mocs3 (ENSMSIG00000031411) #26	ENSMSIG00000031412	Kcng1 (ENSMSIG00000031413) #27
spretus	MODERN SPECIES	11	Ddx27 (MGP_SPRETEiJ_G0025620) #7	Znfx1 (MGP_SPRETEiJ_G0025621) #8	MGP_SPRETEiJ_G0025622	Kcnb1 (MGP_SPRETEiJ_G0025623) #10	Ptgis (MGP_SPRETEiJ_G0025624) #11	B4galt5 (MGP_SPRETEiJ_G0025625) #12	Slc9a8 (MGP_SPRETEiJ_G0025626) #13	Spata2 (MGP_SPRETEiJ_G0025627) #14	Rnf114 (MGP_SPRETEiJ_G0025628) #15	Snai1 (MGP_SPRETEiJ_G0025629) #16	MGP_SPRETEiJ_G0025630	Peds1 (MGP_SPRETEiJ_G0025631) #18	Cebpb (MGP_SPRETEiJ_G0025632) #19	Ptpn1 (MGP_SPRETEiJ_G0025633) #20	Ripor3 (MGP_SPRETEiJ_G0025634) #21	Pard6b (MGP_SPRETEiJ_G0025635) #22	Adnp (MGP_SPRETEiJ_G0025636) #24	MGP_SPRETEiJ_G0025637 #25	MGP_SPRETEiJ_G0025638 #25	Mocs3 (MGP_SPRETEiJ_G0025639) #26	Kcng1 (MGP_SPRETEiJ_G0025640) #27	Nfatc2 (MGP_SPRETEiJ_G0025641) #28	Atp9a (MGP_SPRETEiJ_G0025642) #29	Sall4 (MGP_SPRETEiJ_G0025643) #30	Zfp64 (MGP_SPRETEiJ_G0025644) #31	Tshz2 (MGP_SPRETEiJ_G0025645) #32	Zfp217 (MGP_SPRETEiJ_G0025646) #34	Bcas1 (MGP_SPRETEiJ_G0025647) #35	Cyp24a1 (MGP_SPRETEiJ_G0025648) #36	Pfdn4 (MGP_SPRETEiJ_G0025649) #37	MGP_SPRETEiJ_G0025650
Ryukyu mouse	MODERN SPECIES	11	Ddx27 (MGP_CAROLIEiJ_G0024700) #7	Znfx1 (MGP_CAROLIEiJ_G0024701) #8	MGP_CAROLIEiJ_G0024702	Kcnb1 (MGP_CAROLIEiJ_G0024703) #10	Ptgis (MGP_CAROLIEiJ_G0024704) #11	B4galt5 (MGP_CAROLIEiJ_G0024705) #12	Slc9a8 (MGP_CAROLIEiJ_G0024706) #13	Spata2 (MGP_CAROLIEiJ_G0024707) #14	Rnf114 (MGP_CAROLIEiJ_G0024708) #15	Snai1 (MGP_CAROLIEiJ_G0024709) #16	MGP_CAROLIEiJ_G0024710	Peds1 (MGP_CAROLIEiJ_G0024711) #18	Cebpb (MGP_CAROLIEiJ_G0024712) #19	Ptpn1 (MGP_CAROLIEiJ_G0024713) #20	Ripor3 (MGP_CAROLIEiJ_G0024714) #21	Pard6b (MGP_CAROLIEiJ_G0024715) #22	Adnp (MGP_CAROLIEiJ_G0024716) #24	MGP_CAROLIEiJ_G0024717 #25	MGP_CAROLIEiJ_G0024718 #25	Mocs3 (MGP_CAROLIEiJ_G0024719) #26	Kcng1 (MGP_CAROLIEiJ_G0024720) #27	Nfatc2 (MGP_CAROLIEiJ_G0024721) #28	Atp9a (MGP_CAROLIEiJ_G0024722) #29	Sall4 (MGP_CAROLIEiJ_G0024723) #30	Zfp64 (MGP_CAROLIEiJ_G0024724) #31	Tshz2 (MGP_CAROLIEiJ_G0024725) #32	Zfp217 (MGP_CAROLIEiJ_G0024726) #34	Bcas1 (MGP_CAROLIEiJ_G0024727) #35	Cyp24a1 (MGP_CAROLIEiJ_G0024728) #36	MGP_CAROLIEiJ_G0024729 #37	MGP_CAROLIEiJ_G0024730
Shrew mouse	MODERN SPECIES	16	Ddx27 (MGP_PahariEiJ_G0026142) #7	Znfx1 (MGP_PahariEiJ_G0026143) #8	MGP_PahariEiJ_G0026144	Kcnb1 (MGP_PahariEiJ_G0026145) #10	Ptgis (MGP_PahariEiJ_G0026146) #11	B4galt5 (MGP_PahariEiJ_G0026147) #12	Slc9a8 (MGP_PahariEiJ_G0026148) #13	Spata2 (MGP_PahariEiJ_G0026149) #14	Rnf114 (MGP_PahariEiJ_G0026150) #15	Snai1 (MGP_PahariEiJ_G0026151) #16	MGP_PahariEiJ_G0026152	Peds1 (MGP_PahariEiJ_G0026153) #18	Cebpb (MGP_PahariEiJ_G0026154) #19	Ptpn1 (MGP_PahariEiJ_G0026155) #20	Ripor3 (MGP_PahariEiJ_G0026156) #21	Pard6b (MGP_PahariEiJ_G0026157) #22	MGP_PahariEiJ_G0026158 #24	Dpm1 (MGP_PahariEiJ_G0026159) #25	Mocs3 (MGP_PahariEiJ_G0026160) #26	Kcng1 (MGP_PahariEiJ_G0026161) #27	Nfatc2 (MGP_PahariEiJ_G0026162) #28	Atp9a (MGP_PahariEiJ_G0026163) #29	Sall4 (MGP_PahariEiJ_G0026164) #30	Zfp64 (MGP_PahariEiJ_G0026165) #31	Tshz2 (MGP_PahariEiJ_G0026166) #32	Zfp217 (MGP_PahariEiJ_G0026167) #34	Bcas1 (MGP_PahariEiJ_G0026168) #35	Cyp24a1 (MGP_PahariEiJ_G0026169) #36	Pfdn4 (MGP_PahariEiJ_G0026170) #37	MGP_PahariEiJ_G0026171	Dok5 (MGP_PahariEiJ_G0026172)
Rat	MODERN SPECIES	13	Ddx27 (ENSRNOG00000008081) #7	Znfx1 (ENSRNOG00000008194) #8	Kcnb1 (ENSRNOG00000046949) #10	AABR07054614.1 (ENSRNOG00000008245) #11	Rpl38-ps9 (ENSRNOG00000048701)	B4galt5 (ENSRNOG00000008283) #12	Slc9a8 (ENSRNOG00000008354) #13	Spata2 (ENSRNOG00000009207) #14	Rnf114 (ENSRNOG00000060821) #15	Snai1 (ENSRNOG00000009594) #16	LOC679539 (ENSRNOG00000025580)	Peds1 (ENSRNOG00000060571) #18	Cebpb (ENSRNOG00000057347) #19	Ptpn1 (ENSRNOG00000010574) #20	Ripor3 (ENSRNOG00000010791) #21	Pard6b (ENSRNOG00000010883) #22	Adnp (ENSRNOG00000010975) #24	Dpm1 (ENSRNOG00000010993) #25	Mocs3 (ENSRNOG00000025067) #26	Kcng1 (ENSRNOG00000054314) #27	Nfatc2 (ENSRNOG00000012175) #28	Atp9a (ENSRNOG00000049484) #29	Sall4 (ENSRNOG00000050035) #30	Zfp93 (ENSRNOG00000012762) #31	ENSRNOG00000067568	Tshz2 (ENSRNOG00000048433) #32	ENSRNOG00000064332 #33	Zfp217 (ENSRNOG00000021787) #34	Bcas1 (ENSRNOG00000012906) #35	ENSRNOG00000063885	ENSRNOG00000064257
Upper Galilee mountains blind mole rat	MODERN SPECIES	910								Spata2 (ENSNGAG00000018425) #14	Rnf114 (ENSNGAG00000017673) #15	Snai1 (ENSNGAG00000017185) #16	Ube2v1 (ENSNGAG00000015973)	ENSNGAG00000013302	Cebpb (ENSNGAG00000012015) #19	Ptpn1 (ENSNGAG00000010216) #20	Ripor3 (ENSNGAG00000013334) #21	Pard6b (ENSNGAG00000013685) #22	ENSNGAG00000011839 #24	ENSNGAG00000001117 #25	Mocs3 (ENSNGAG00000011771) #26	Kcng1 (ENSNGAG00000022351) #27	Nfatc2 (ENSNGAG00000010940) #28	ENSNGAG00000006990	Atp9a (ENSNGAG00000000818) #29	Sall4 (ENSNGAG00000017833) #30	Zfp64 (ENSNGAG00000018331) #31	ENSNGAG00000016474 #32	Zfp217 (ENSNGAG00000016391) #34	Bcas1 (ENSNGAG00000015655) #35	Cyp24a1 (ENSNGAG00000013537) #36	Pfdn4 (ENSNGAG00000001025) #37	Dok5 (ENSNGAG00000013135)
Lesser Egyptian jerboa	MODERN SPECIES	51	Adhfe1 (ENSJJAG00000010295)	ENSJJAG00000011507	Crh (ENSJJAG00000011598)	Trim55 (ENSJJAG00000013977)	Dnajc5b (ENSJJAG00000022487)	Pde7a (ENSJJAG00000023569)	Mtfr1 (ENSJJAG00000000405)	ENSJJAG00000021828	Cyp7b1 (ENSJJAG00000019809)	Bhlhe22 (ENSJJAG00000012012)	ENSJJAG00000000742	Ythdf3 (ENSJJAG00000017742)	Ttpa (ENSJJAG00000016673)	Ggh (ENSJJAG00000019965)	Nkain3 (ENSJJAG00000019686)	ENSJJAG00000006659 #22	ENSJJAG00000022655	Clvs1 (ENSJJAG00000014044)	Chd7 (ENSJJAG00000022064)	Rab2a (ENSJJAG00000000676)	Car8 (ENSJJAG00000000356)	Tox (ENSJJAG00000023957)	Nsmaf (ENSJJAG00000018732)	Sdcbp (ENSJJAG00000008505)	Cyp7a1 (ENSJJAG00000009993)	Ubxn2b (ENSJJAG00000017241)	Fam110b (ENSJJAG00000011482)	Bpnt2 (ENSJJAG00000016357)	Penk (ENSJJAG00000012141)	Sdr16c6 (ENSJJAG00000005653)	Sdr16c5 (ENSJJAG00000012889)
Kangaroo rat	MODERN SPECIES	394	Cse1l (ENSDORG00000013960)	Stau1 (ENSDORG00000030220)	Ddx27 (ENSDORG00000014137) #7	Znfx1 (ENSDORG00000014142) #8	Kcnb1 (ENSDORG00000026603) #10	Ptgis (ENSDORG00000013245) #11	B4galt5 (ENSDORG00000001984) #12	Slc9a8 (ENSDORG00000002709) #13	Spata2 (ENSDORG00000026324) #14	Rnf114 (ENSDORG00000014937) #15	Snai1 (ENSDORG00000025372) #16	ENSDORG00000027579 #17	ENSDORG00000004219	Ptpn1 (ENSDORG00000013016) #20	Ripor3 (ENSDORG00000026878) #21	Pard6b (ENSDORG00000007031) #22	Adnp (ENSDORG00000024209) #24	Dpm1 (ENSDORG00000010186) #25	Mocs3 (ENSDORG00000029643) #26	Kcng1 (ENSDORG00000008510) #27	Nfatc2 (ENSDORG00000028181) #28	Atp9a (ENSDORG00000008732) #29	Sall4 (ENSDORG00000012841) #30	Zfp64 (ENSDORG00000024389) #31	ENSDORG00000028111 #32	ENSDORG00000027670 #33	Zfp217 (ENSDORG00000023982) #34	Bcas1 (ENSDORG00000002327) #35	Cyp24a1 (ENSDORG00000016127) #36	ENSDORG00000006644	Dok5 (ENSDORG00000007241)
Lagomorpha	ANCESTRAL SPECIES	249														ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a #23	ENSGT00530000063631.b #24	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29
Rabbit	MODERN SPECIES	555														PTPN1 (ENSOCUG00000008605) #20	RIPOR3 (ENSOCUG00000016769) #21	PARD6B (ENSOCUG00000015993) #22	BCAS4 (ENSOCUG00000014694) #23	ADNP (ENSOCUG00000014704) #24	DPM1 (ENSOCUG00000014708) #25	MOCS3 (ENSOCUG00000014721) #26	ENSOCUG00000011013 #27	NFATC2 (ENSOCUG00000012556) #28	ATP9A (ENSOCUG00000021416) #29
Pika	MODERN SPECIES	4317														PTPN1 (ENSOPRG00000001024) #20	RIPOR3 (ENSOPRG00000001048) #21	ENSOPRG00000001071 #22