Tetrapoda	ANCESTRAL SPECIES	19	ENSGT00940000157304	ENSGT00940000165342	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725	ENSGT00940000159728
Amniota	ANCESTRAL SPECIES	19	ENSGT00940000157304	ENSGT00940000165342	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Mammalia	ANCESTRAL SPECIES	15	ENSGT00550000074997 #7	ENSGT00940000157304	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Theria	ANCESTRAL SPECIES	19	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Eutheria	ANCESTRAL SPECIES	11	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Boreoeutheria	ANCESTRAL SPECIES	17	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00910000148217	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34
Euarchontoglires	ANCESTRAL SPECIES	17	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00910000148217	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34
Euarchontoglires_A	ANCESTRAL SPECIES	16	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Glires	ANCESTRAL SPECIES	17	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Rodentia	ANCESTRAL SPECIES	18	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Rodentia_B	ANCESTRAL SPECIES	13	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Myomorpha	ANCESTRAL SPECIES	9	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Muroidea	ANCESTRAL SPECIES	7	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Mus	ANCESTRAL SPECIES	1	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT01090000262946 #37
Mus_A	ANCESTRAL SPECIES		ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B.g.b #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT01090000262946 #37
Ryukyu mouse	MODERN SPECIES	11	Ddx27 (MGP_CAROLIEiJ_G0024700) #7	Znfx1 (MGP_CAROLIEiJ_G0024701) #8	MGP_CAROLIEiJ_G0024702 #9	Kcnb1 (MGP_CAROLIEiJ_G0024703) #10	Ptgis (MGP_CAROLIEiJ_G0024704) #11	B4galt5 (MGP_CAROLIEiJ_G0024705) #12	Slc9a8 (MGP_CAROLIEiJ_G0024706) #13	Spata2 (MGP_CAROLIEiJ_G0024707) #14	Rnf114 (MGP_CAROLIEiJ_G0024708) #15	Snai1 (MGP_CAROLIEiJ_G0024709) #16	MGP_CAROLIEiJ_G0024710 #17	Peds1 (MGP_CAROLIEiJ_G0024711) #18	Cebpb (MGP_CAROLIEiJ_G0024712) #19	Ptpn1 (MGP_CAROLIEiJ_G0024713) #20	Ripor3 (MGP_CAROLIEiJ_G0024714) #21	Pard6b (MGP_CAROLIEiJ_G0024715) #22	Adnp (MGP_CAROLIEiJ_G0024716) #23	MGP_CAROLIEiJ_G0024717 #24	MGP_CAROLIEiJ_G0024718 #25	Mocs3 (MGP_CAROLIEiJ_G0024719) #26	Kcng1 (MGP_CAROLIEiJ_G0024720) #27	Nfatc2 (MGP_CAROLIEiJ_G0024721) #28	Atp9a (MGP_CAROLIEiJ_G0024722) #29	Sall4 (MGP_CAROLIEiJ_G0024723) #30	Zfp64 (MGP_CAROLIEiJ_G0024724) #31	Tshz2 (MGP_CAROLIEiJ_G0024725) #32	Zfp217 (MGP_CAROLIEiJ_G0024726) #33	Bcas1 (MGP_CAROLIEiJ_G0024727) #34	Cyp24a1 (MGP_CAROLIEiJ_G0024728) #35	MGP_CAROLIEiJ_G0024729 #36	MGP_CAROLIEiJ_G0024730 #37
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B.g.b #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Mouse	MODERN SPECIES	11	Ddx27 (ENSMUSG00000017999) #7	Znfx1 (ENSMUSG00000039501) #8	Kcnb1 (ENSMUSG00000050556) #10	Ptgis (ENSMUSG00000017969) #11	B4galt5 (ENSMUSG00000017929) #12	Slc9a8 (ENSMUSG00000039463) #13	Spata2 (ENSMUSG00000047030) #14	Rnf114 (ENSMUSG00000006418) #15	Snai1 (ENSMUSG00000042821) #16	Ube2v1 (ENSMUSG00000078923) #17	Gm20431 (ENSMUSG00000089739)	Peds1 (ENSMUSG00000090213) #18	Cebpb (ENSMUSG00000056501) #19	Ptpn1 (ENSMUSG00000027540) #20	Ripor3 (ENSMUSG00000074577) #21	Pard6b (ENSMUSG00000044641) #22	Adnp (ENSMUSG00000051149) #23	Dpm1 (ENSMUSG00000078919) ##25	Mocs3 (ENSMUSG00000074576) #26	Kcng1 (ENSMUSG00000074575) #27	Nfatc2 (ENSMUSG00000027544) #28	Atp9a (ENSMUSG00000027546) #29	Sall4 (ENSMUSG00000027547) #30	Zfp64 (ENSMUSG00000027551) #31	Tshz2 (ENSMUSG00000047907) #32	Zfp217 (ENSMUSG00000052056) #33	Bcas1 (ENSMUSG00000013523) #34	Cyp24a1 (ENSMUSG00000038567) #35	Pfdn4 (ENSMUSG00000052033) #36	Dok5 (ENSMUSG00000027560)	Cbln4 (ENSMUSG00000067578)
Mus_C	ANCESTRAL SPECIES	1	ENSGT00700000106212	ENSGT00390000008325.b.b	ENSGT00940000155268	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B.g.b #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT01090000262956
Steppe mouse	MODERN SPECIES	2968	ENSMSIG00000031338	Kcnb1 (ENSMSIG00000031340) #10	Ptgis (ENSMSIG00000031341) #11	B4galt5 (ENSMSIG00000031348) #12	Slc9a8 (ENSMSIG00000031352) #13	ENSMSIG00000031374 #14	Rnf114 (ENSMSIG00000031377) #15	ENSMSIG00000031378	ENSMSIG00000031380	Snai1 (ENSMSIG00000031381) #16	Ube2v1 (ENSMSIG00000031383) #17	ENSMSIG00000031391 #19	ENSMSIG00000031393	Ptpn1 (ENSMSIG00000031396) #20	Ripor3 (ENSMSIG00000031399) #21	Pard6b (ENSMSIG00000031403) #22	Adnp (ENSMSIG00000031404) #23	ENSMSIG00000031406 ##25	Mocs3 (ENSMSIG00000031411) #26	ENSMSIG00000031412	Kcng1 (ENSMSIG00000031413) #27
spretus	MODERN SPECIES	11	Ddx27 (MGP_SPRETEiJ_G0025620) #7	Znfx1 (MGP_SPRETEiJ_G0025621) #8	MGP_SPRETEiJ_G0025622	Kcnb1 (MGP_SPRETEiJ_G0025623) #10	Ptgis (MGP_SPRETEiJ_G0025624) #11	B4galt5 (MGP_SPRETEiJ_G0025625) #12	Slc9a8 (MGP_SPRETEiJ_G0025626) #13	Spata2 (MGP_SPRETEiJ_G0025627) #14	Rnf114 (MGP_SPRETEiJ_G0025628) #15	Snai1 (MGP_SPRETEiJ_G0025629) #16	MGP_SPRETEiJ_G0025630 #17	Peds1 (MGP_SPRETEiJ_G0025631) #18	Cebpb (MGP_SPRETEiJ_G0025632) #19	Ptpn1 (MGP_SPRETEiJ_G0025633) #20	Ripor3 (MGP_SPRETEiJ_G0025634) #21	Pard6b (MGP_SPRETEiJ_G0025635) #22	Adnp (MGP_SPRETEiJ_G0025636) #23	MGP_SPRETEiJ_G0025637 ##25	MGP_SPRETEiJ_G0025638 #25	Mocs3 (MGP_SPRETEiJ_G0025639) #26	Kcng1 (MGP_SPRETEiJ_G0025640) #27	Nfatc2 (MGP_SPRETEiJ_G0025641) #28	Atp9a (MGP_SPRETEiJ_G0025642) #29	Sall4 (MGP_SPRETEiJ_G0025643) #30	Zfp64 (MGP_SPRETEiJ_G0025644) #31	Tshz2 (MGP_SPRETEiJ_G0025645) #32	Zfp217 (MGP_SPRETEiJ_G0025646) #33	Bcas1 (MGP_SPRETEiJ_G0025647) #34	Cyp24a1 (MGP_SPRETEiJ_G0025648) #35	Pfdn4 (MGP_SPRETEiJ_G0025649) #36	MGP_SPRETEiJ_G0025650
Shrew mouse	MODERN SPECIES	16	Ddx27 (MGP_PahariEiJ_G0026142) #7	Znfx1 (MGP_PahariEiJ_G0026143) #8	MGP_PahariEiJ_G0026144	Kcnb1 (MGP_PahariEiJ_G0026145) #10	Ptgis (MGP_PahariEiJ_G0026146) #11	B4galt5 (MGP_PahariEiJ_G0026147) #12	Slc9a8 (MGP_PahariEiJ_G0026148) #13	Spata2 (MGP_PahariEiJ_G0026149) #14	Rnf114 (MGP_PahariEiJ_G0026150) #15	Snai1 (MGP_PahariEiJ_G0026151) #16	MGP_PahariEiJ_G0026152 ##17	Peds1 (MGP_PahariEiJ_G0026153) #18	Cebpb (MGP_PahariEiJ_G0026154) #19	Ptpn1 (MGP_PahariEiJ_G0026155) #20	Ripor3 (MGP_PahariEiJ_G0026156) #21	Pard6b (MGP_PahariEiJ_G0026157) #22	MGP_PahariEiJ_G0026158 #23	Dpm1 (MGP_PahariEiJ_G0026159) #25	Mocs3 (MGP_PahariEiJ_G0026160) #26	Kcng1 (MGP_PahariEiJ_G0026161) #27	Nfatc2 (MGP_PahariEiJ_G0026162) #28	Atp9a (MGP_PahariEiJ_G0026163) #29	Sall4 (MGP_PahariEiJ_G0026164) #30	Zfp64 (MGP_PahariEiJ_G0026165) #31	Tshz2 (MGP_PahariEiJ_G0026166) #32	Zfp217 (MGP_PahariEiJ_G0026167) #33	Bcas1 (MGP_PahariEiJ_G0026168) #34	Cyp24a1 (MGP_PahariEiJ_G0026169) #35	Pfdn4 (MGP_PahariEiJ_G0026170) #36	MGP_PahariEiJ_G0026171 #37	Dok5 (MGP_PahariEiJ_G0026172)
Rat	MODERN SPECIES	13	Ddx27 (ENSRNOG00000008081) #7	Znfx1 (ENSRNOG00000008194) #8	Kcnb1 (ENSRNOG00000046949) #10	AABR07054614.1 (ENSRNOG00000008245) #11	Rpl38-ps9 (ENSRNOG00000048701)	B4galt5 (ENSRNOG00000008283) #12	Slc9a8 (ENSRNOG00000008354) #13	Spata2 (ENSRNOG00000009207) #14	Rnf114 (ENSRNOG00000060821) #15	Snai1 (ENSRNOG00000009594) #16	LOC679539 (ENSRNOG00000025580) ##17	Peds1 (ENSRNOG00000060571) #18	Cebpb (ENSRNOG00000057347) #19	Ptpn1 (ENSRNOG00000010574) #20	Ripor3 (ENSRNOG00000010791) #21	Pard6b (ENSRNOG00000010883) #22	Adnp (ENSRNOG00000010975) #23	Dpm1 (ENSRNOG00000010993) #25	Mocs3 (ENSRNOG00000025067) #26	Kcng1 (ENSRNOG00000054314) #27	Nfatc2 (ENSRNOG00000012175) #28	Atp9a (ENSRNOG00000049484) #29	Sall4 (ENSRNOG00000050035) #30	Zfp93 (ENSRNOG00000012762) #31	ENSRNOG00000067568	Tshz2 (ENSRNOG00000048433) #32	ENSRNOG00000064332	Zfp217 (ENSRNOG00000021787) #33	Bcas1 (ENSRNOG00000012906) #34	ENSRNOG00000063885	ENSRNOG00000064257
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Golden Hamster	MODERN SPECIES	664	Cse1l (ENSMAUG00000001362)	Stau1 (ENSMAUG00000013846)	Ddx27 (ENSMAUG00000000552) #7	Znfx1 (ENSMAUG00000016416) #8	Kcnb1 (ENSMAUG00000019058) #10	Ptgis (ENSMAUG00000016166) #11	B4galt5 (ENSMAUG00000015144) #12	Slc9a8 (ENSMAUG00000018259) #13	Spata2 (ENSMAUG00000020910) #14	Rnf114 (ENSMAUG00000019385) #15	Snai1 (ENSMAUG00000021592) #16	Ube2v1 (ENSMAUG00000020962) ##17	Peds1 (ENSMAUG00000016961) #18	Ptpn1 (ENSMAUG00000010010) #20	Ripor3 (ENSMAUG00000010157) #21	Pard6b (ENSMAUG00000010497) #22	Adnp (ENSMAUG00000020819) #23	Dpm1 (ENSMAUG00000016233) #25	Mocs3 (ENSMAUG00000007351) #26	Kcng1 (ENSMAUG00000015676) #27	Nfatc2 (ENSMAUG00000011773) #28	Atp9a (ENSMAUG00000004916) #29	Sall4 (ENSMAUG00000015814) #30	Zfp64 (ENSMAUG00000015438) #31	ENSMAUG00000003995 #32	ENSMAUG00000015308 #34	Cyp24a1 (ENSMAUG00000013246) #35	Pfdn4 (ENSMAUG00000002277) #36	ENSMAUG00000001483	Cbln4 (ENSMAUG00000013556)	Mc3r (ENSMAUG00000006998)
Chinese hamster chok1gshd	MODERN SPECIES	195	Stau1 (ENSCGRG00001013453)	Ddx27 (ENSCGRG00001015330) #7	Znfx1 (ENSCGRG00001017355) #8	Kcnb1 (ENSCGRG00001019221) #10	Ptgis (ENSCGRG00001019919) #11	B4galt5 (ENSCGRG00001021312) #12	Slc9a8 (ENSCGRG00001022939) #13	Spata2 (ENSCGRG00001005279) #14	Rnf114 (ENSCGRG00001006890) #15	Snai1 (ENSCGRG00001007749) #16	Ube2v1 (ENSCGRG00001009565) #17	Peds1 (ENSCGRG00001010523) #18	Cebpb (ENSCGRG00001001737) #19	Ptpn1 (ENSCGRG00001012267) #20	Ripor3 (ENSCGRG00001013099) #21	Pard6b (ENSCGRG00001014206) #22	Adnp (ENSCGRG00001004111) #23	Dpm1 (ENSCGRG00001007175) #25	Mocs3 (ENSCGRG00001003680) #26	Kcng1 (ENSCGRG00001009827) #27	Nfatc2 (ENSCGRG00001012491) #28	Atp9a (ENSCGRG00001017172) #29	Sall4 (ENSCGRG00001019569) #30	Zfp64 (ENSCGRG00001020443) #31	ENSCGRG00001015533	Tshz2 (ENSCGRG00001000496) #32	ENSCGRG00001007530	Zfp217 (ENSCGRG00001002600) #33	Bcas1 (ENSCGRG00001007157) #34	Cyp24a1 (ENSCGRG00001010160) #35	Pfdn4 (ENSCGRG00001010542) #36
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.ib.b.b #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Prairie vole	MODERN SPECIES	357	Stau1 (ENSMOCG00000018743)	Ddx27 (ENSMOCG00000019594) #7	Znfx1 (ENSMOCG00000005411) #8	Kcnb1 (ENSMOCG00000001197) #10	Ptgis (ENSMOCG00000012430) #11	B4galt5 (ENSMOCG00000011995) #12	Slc9a8 (ENSMOCG00000004864) #13	Spata2 (ENSMOCG00000017632) #14	Rnf114 (ENSMOCG00000015529) #15	Snai1 (ENSMOCG00000007847) #16	Ube2v1 (ENSMOCG00000012071) #17	Peds1 (ENSMOCG00000010275) #18	Cebpb (ENSMOCG00000010607) #19	Ptpn1 (ENSMOCG00000001636) #20	Ripor3 (ENSMOCG00000010739) #21	Pard6b (ENSMOCG00000003321) #22	ENSMOCG00000001467 #23	Dpm1 (ENSMOCG00000015289) #25	Mocs3 (ENSMOCG00000003624) #26	Kcng1 (ENSMOCG00000009238) #27	Nfatc2 (ENSMOCG00000000259) #28	Atp9a (ENSMOCG00000016994) #29	Sall4 (ENSMOCG00000018245) #30	Zfp64 (ENSMOCG00000004895) #31	ENSMOCG00000013704 #32	Zfp217 (ENSMOCG00000018704) #33	Bcas1 (ENSMOCG00000004294) #34	Cyp24a1 (ENSMOCG00000016929) #35	ENSMOCG00000000248	ENSMOCG00000013934	Dok5 (ENSMOCG00000006196)
Northern American deer mouse	MODERN SPECIES	17	Cse1l (ENSPEMG00000000944)	Stau1 (ENSPEMG00000022045)	Ddx27 (ENSPEMG00000023215) #7	Znfx1 (ENSPEMG00000008042) #8	ENSPEMG00000001839	Ptgis (ENSPEMG00000018632) #11	ENSPEMG00000000220	Slc9a8 (ENSPEMG00000022094) #13	Spata2 (ENSPEMG00000027358) #14	ENSPEMG00000023570	Snai1 (ENSPEMG00000023213) #16	ENSPEMG00000001442 ##17	Peds1 (ENSPEMG00000006010) #18	Ptpn1 (ENSPEMG00000012811) #20	Ripor3 (ENSPEMG00000011182) #21	Pard6b (ENSPEMG00000015881) #22	Adnp (ENSPEMG00000028284) #23	Dpm1 (ENSPEMG00000022392) #25	ENSPEMG00000023371 #26	Kcng1 (ENSPEMG00000021560) #27	Nfatc2 (ENSPEMG00000022457) #28	ENSPEMG00000028160	Atp9a (ENSPEMG00000022700) #29	Sall4 (ENSPEMG00000022706) #30	Zfp64 (ENSPEMG00000014980) #31	ENSPEMG00000014233	Tshz2 (ENSPEMG00000029085) #32	ENSPEMG00000029761	Zfp217 (ENSPEMG00000011097) #33	Bcas1 (ENSPEMG00000000354) #34	Cyp24a1 (ENSPEMG00000014776) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	910								Spata2 (ENSNGAG00000018425) #14	Rnf114 (ENSNGAG00000017673) #15	Snai1 (ENSNGAG00000017185) #16	Ube2v1 (ENSNGAG00000015973) #17	ENSNGAG00000013302	Cebpb (ENSNGAG00000012015) #19	Ptpn1 (ENSNGAG00000010216) #20	Ripor3 (ENSNGAG00000013334) #21	Pard6b (ENSNGAG00000013685) #22	ENSNGAG00000011839 #23	ENSNGAG00000001117 #25	Mocs3 (ENSNGAG00000011771) #26	Kcng1 (ENSNGAG00000022351) #27	Nfatc2 (ENSNGAG00000010940) #28	ENSNGAG00000006990	Atp9a (ENSNGAG00000000818) #29	Sall4 (ENSNGAG00000017833) #30	Zfp64 (ENSNGAG00000018331) #31	ENSNGAG00000016474 #32	Zfp217 (ENSNGAG00000016391) #33	Bcas1 (ENSNGAG00000015655) #34	Cyp24a1 (ENSNGAG00000013537) #35	Pfdn4 (ENSNGAG00000001025) #36	Dok5 (ENSNGAG00000013135)
Lesser Egyptian jerboa	MODERN SPECIES	51	Adhfe1 (ENSJJAG00000010295)	ENSJJAG00000011507	Crh (ENSJJAG00000011598)	Trim55 (ENSJJAG00000013977)	Dnajc5b (ENSJJAG00000022487)	Pde7a (ENSJJAG00000023569)	Mtfr1 (ENSJJAG00000000405)	ENSJJAG00000021828	Cyp7b1 (ENSJJAG00000019809)	Bhlhe22 (ENSJJAG00000012012)	ENSJJAG00000000742	Ythdf3 (ENSJJAG00000017742)	Ttpa (ENSJJAG00000016673)	Ggh (ENSJJAG00000019965)	Nkain3 (ENSJJAG00000019686)	ENSJJAG00000006659 #22	ENSJJAG00000022655	Clvs1 (ENSJJAG00000014044)	Chd7 (ENSJJAG00000022064)	Rab2a (ENSJJAG00000000676)	Car8 (ENSJJAG00000000356)	Tox (ENSJJAG00000023957)	Nsmaf (ENSJJAG00000018732)	Sdcbp (ENSJJAG00000008505)	Cyp7a1 (ENSJJAG00000009993)	Ubxn2b (ENSJJAG00000017241)	Fam110b (ENSJJAG00000011482)	Bpnt2 (ENSJJAG00000016357)	Penk (ENSJJAG00000012141)	Sdr16c6 (ENSJJAG00000005653)	Sdr16c5 (ENSJJAG00000012889)
Kangaroo rat	MODERN SPECIES	394	Cse1l (ENSDORG00000013960)	Stau1 (ENSDORG00000030220)	Ddx27 (ENSDORG00000014137) #7	Znfx1 (ENSDORG00000014142) #8	Kcnb1 (ENSDORG00000026603) #10	Ptgis (ENSDORG00000013245) #11	B4galt5 (ENSDORG00000001984) #12	Slc9a8 (ENSDORG00000002709) #13	Spata2 (ENSDORG00000026324) #14	Rnf114 (ENSDORG00000014937) #15	Snai1 (ENSDORG00000025372) #16	ENSDORG00000027579	ENSDORG00000004219	Ptpn1 (ENSDORG00000013016) #20	Ripor3 (ENSDORG00000026878) #21	Pard6b (ENSDORG00000007031) #22	Adnp (ENSDORG00000024209) #23	Dpm1 (ENSDORG00000010186) #25	Mocs3 (ENSDORG00000029643) #26	Kcng1 (ENSDORG00000008510) #27	Nfatc2 (ENSDORG00000028181) #28	Atp9a (ENSDORG00000008732) #29	Sall4 (ENSDORG00000012841) #30	Zfp64 (ENSDORG00000024389) #31	ENSDORG00000028111 #32	ENSDORG00000027670	Zfp217 (ENSDORG00000023982) #33	Bcas1 (ENSDORG00000002327) #34	Cyp24a1 (ENSDORG00000016127) #35	ENSDORG00000006644	Dok5 (ENSDORG00000007241)
Rodentia_A	ANCESTRAL SPECIES	17	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Hystricomorpha	ANCESTRAL SPECIES	10	ENSGT00940000157304.i.a	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Naked mole-rat female	MODERN SPECIES	6	ZNFX1 (ENSHGLG00000008068) #8	ENSHGLG00000049086	KCNB1 (ENSHGLG00000038195) #10	PTGIS (ENSHGLG00000007083) #11	B4GALT5 (ENSHGLG00000006719) #12	SLC9A8 (ENSHGLG00000006337) #13	SPATA2 (ENSHGLG00000000487) #14	RNF114 (ENSHGLG00000005669) #15	SNAI1 (ENSHGLG00000005310) #16	ENSHGLG00000049806	PEDS1 (ENSHGLG00000005163) #18	ENSHGLG00000042761 #19	PTPN1 (ENSHGLG00000005082) #20	ENSHGLG00000012434	RIPOR3 (ENSHGLG00000012260) #21	PARD6B (ENSHGLG00000012058) #22	ENSHGLG00000034848	ADNP (ENSHGLG00000011922) #23	ENSHGLG00000011694 #25	MOCS3 (ENSHGLG00000020809) #26	KCNG1 (ENSHGLG00000011040) #27	NFATC2 (ENSHGLG00000010406) #28	ENSHGLG00000044936	ATP9A (ENSHGLG00000009412) #29	SALL4 (ENSHGLG00000009043) #30	ENSHGLG00000044690	ENSHGLG00000008937	ENSHGLG00000033028 #31	ENSHGLG00000049099 #32	ENSHGLG00000050175	ENSHGLG00000048236
Hystricomorpha_a	ANCESTRAL SPECIES	8	ENSGT00940000157304.j	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696.ac.a #36
Guinea pig	MODERN SPECIES	96														PTPN1 (ENSCPOG00000033436) #20	RIPOR3 (ENSCPOG00000010650) #21	PARD6B (ENSCPOG00000021603) #22	ADNP (ENSCPOG00000001591) #23	DPM1 (ENSCPOG00000033471) #25	MOCS3 (ENSCPOG00000026680) #26	KCNG1 (ENSCPOG00000015203) #27	NFATC2 (ENSCPOG00000012743) #28	ATP9A (ENSCPOG00000012747) #29	ENSCPOG00000038489 #30	ENSCPOG00000036300 #30	ZFP64 (ENSCPOG00000025271) #31	TSHZ2 (ENSCPOG00000002986) #32	ENSCPOG00000038107	ZNF217 (ENSCPOG00000027399) #33	BCAS1 (ENSCPOG00000009194) #34	CYP24A1 (ENSCPOG00000010077) #35	ENSCPOG00000032848 #36
Hystricomorpha_b	ANCESTRAL SPECIES	16	ENSGT00940000157304.j	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696.ac.a.b #36
Degu	MODERN SPECIES	118	STAU1 (ENSODEG00000006523)	DDX27 (ENSODEG00000006281) #7	ZNFX1 (ENSODEG00000006490) #8	KCNB1 (ENSODEG00000007239) #10	PTGIS (ENSODEG00000006946) #11	ENSODEG00000006524 #12	SLC9A8 (ENSODEG00000007225) #13	SPATA2 (ENSODEG00000006882) #14	RNF114 (ENSODEG00000006139) #15	SNAI1 (ENSODEG00000007856) #16	ENSODEG00000006622	PEDS1 (ENSODEG00000006093) #18	CEBPB (ENSODEG00000007763) #19	PTPN1 (ENSODEG00000009073) #20	RIPOR3 (ENSODEG00000005970) #21	PARD6B (ENSODEG00000005877) #22	ADNP (ENSODEG00000007210) #23	ENSODEG00000006312 #25	MOCS3 (ENSODEG00000019332) #26	KCNG1 (ENSODEG00000005905) #27	ENSODEG00000007977	NFATC2 (ENSODEG00000006560) #28	ATP9A (ENSODEG00000006908) #29	ENSODEG00000006762 #30	ENSODEG00000006564	ZFP64 (ENSODEG00000005735) #31	ENSODEG00000019550 #32	ENSODEG00000019595	ZNF217 (ENSODEG00000006753) #33	ENSODEG00000006282	CYP24A1 (ENSODEG00000005827) #35
Long-tailed chinchilla	MODERN SPECIES	152	ENSCLAG00000006516	DDX27 (ENSCLAG00000008075) #7	ZNFX1 (ENSCLAG00000006567) #8	KCNB1 (ENSCLAG00000005669) #10	PTGIS (ENSCLAG00000005501) #11	B4GALT5 (ENSCLAG00000006323) #12	SLC9A8 (ENSCLAG00000004548) #13	SPATA2 (ENSCLAG00000017362) #14	RNF114 (ENSCLAG00000012925) #15	SNAI1 (ENSCLAG00000012285) #16	ENSCLAG00000006741	PEDS1 (ENSCLAG00000005635) #18	ENSCLAG00000006078	PTPN1 (ENSCLAG00000005789) #20	RIPOR3 (ENSCLAG00000004580) #21	PARD6B (ENSCLAG00000009267) #22	BCAS4 (ENSCLAG00000009069)	ENSCLAG00000013494	ADNP (ENSCLAG00000012575) #23	ENSCLAG00000016153 #25	MOCS3 (ENSCLAG00000017807) #26	KCNG1 (ENSCLAG00000006678) #27	NFATC2 (ENSCLAG00000006467) #28	ATP9A (ENSCLAG00000010633) #29	SALL4 (ENSCLAG00000010479) #30	ZFP64 (ENSCLAG00000008329) #31	TSHZ2 (ENSCLAG00000009630) #32	ENSCLAG00000017696	ENSCLAG00000006928 #33	BCAS1 (ENSCLAG00000006299) #34	CYP24A1 (ENSCLAG00000006942) #35
Sciuridae	ANCESTRAL SPECIES	13	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B.k #25	ENSGT00940000153481.B.l #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	3	ENSSVLG00005020751	ENSSVLG00005020782	ENSSVLG00005020823	ENSSVLG00005020855	ENSSVLG00005020890	ENSSVLG00005020924	ENSSVLG00005020973	ENSSVLG00005020985	ENSSVLG00005021014	ENSSVLG00005021055	ENSSVLG00005021066	ENSSVLG00005021091	ENSSVLG00005021128	ENSSVLG00005021177	ENSSVLG00005021226	ENSSVLG00005021275 #22	ENSSVLG00005021299	ENSSVLG00005021338	ENSSVLG00005021359	FZD8 (ENSSVLG00005021417)	GJD4 (ENSSVLG00005021504)	CCNY (ENSSVLG00005021552)	ENSSVLG00005021670	ENSSVLG00005021688	CREM (ENSSVLG00005021874)	CUL2 (ENSSVLG00005022796)	PARD3 (ENSSVLG00005022949)	ENSSVLG00005023205	ENSSVLG00005023228	NRP1 (ENSSVLG00005023267)	ITGB1 (ENSSVLG00005023311)
Eurasian red squirrel	MODERN SPECIES	11	STAU1 (ENSSVLG00005004230)	DDX27 (ENSSVLG00005004272) #7	ZNFX1 (ENSSVLG00005004315) #8	KCNB1 (ENSSVLG00005004367) #10	PTGIS (ENSSVLG00005004394) #11	B4GALT5 (ENSSVLG00005004427) #12	SLC9A8 (ENSSVLG00005004467) #13	SPATA2 (ENSSVLG00005004527) #14	RNF114 (ENSSVLG00005004552) #15	SNAI1 (ENSSVLG00005004568) #16	UBE2V1 (ENSSVLG00005004590) #17	ENSSVLG00005004618	CEBPB (ENSSVLG00005004641) #19	PTPN1 (ENSSVLG00005000174) #20	RIPOR3 (ENSSVLG00005000232) #21	ENSSVLG00005000290 #22	ENSSVLG00005000318	BCAS4 (ENSSVLG00005000345)	ADNP (ENSSVLG00005000370) #23	DPM1 (ENSSVLG00005000398) #25	MOCS3 (ENSSVLG00005000434) #26	KCNG1 (ENSSVLG00005000448) #27	NFATC2 (ENSSVLG00005000511) #28	ATP9A (ENSSVLG00005000658) #29	SALL4 (ENSSVLG00005000729) #30	ENSSVLG00005000761	ZFP64 (ENSSVLG00005000833) #31	TSHZ2 (ENSSVLG00005000893) #32	ENSSVLG00005000915	ENSSVLG00005000930	ZNF217 (ENSSVLG00005000945) #33
Marmotini	ANCESTRAL SPECIES	5	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041.e #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B.l #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Alpin marmot	MODERN SPECIES		STAU1 (ENSMMMG00000007273)	ENSMMMG00000007315	DDX27 (ENSMMMG00000007319) #7	ZNFX1 (ENSMMMG00000007354) #8	KCNB1 (ENSMMMG00000007399) #10	PTGIS (ENSMMMG00000007402) #11	B4GALT5 (ENSMMMG00000007414) #12	SLC9A8 (ENSMMMG00000007474) #13	SPATA2 (ENSMMMG00000007555) #14	ENSMMMG00000007564	RNF114 (ENSMMMG00000007568) #15	SNAI1 (ENSMMMG00000007619) #16	UBE2V1 (ENSMMMG00000007630) #17	ENSMMMG00000007699 #20	RIPOR3 (ENSMMMG00000007709) #21	PARD6B (ENSMMMG00000007746) #22	ADNP (ENSMMMG00000007757) #23	ENSMMMG00000007768 #25	MOCS3 (ENSMMMG00000007809) #26	KCNG1 (ENSMMMG00000007813) #27	ENSMMMG00000007852 #28	ATP9A (ENSMMMG00000007891) #29	SALL4 (ENSMMMG00000008074) #30	ZFP64 (ENSMMMG00000008125) #31	TSHZ2 (ENSMMMG00000008206) #32	ENSMMMG00000008228	ZNF217 (ENSMMMG00000008233) #33	BCAS1 (ENSMMMG00000008267) #34	CYP24A1 (ENSMMMG00000008409) #35	PFDN4 (ENSMMMG00000008431) #36	DOK5 (ENSMMMG00000008468)
Marmotini_b	ANCESTRAL SPECIES	25	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041.e #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B.l #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Squirrel	MODERN SPECIES	114	CSE1L (ENSSTOG00000003600)	STAU1 (ENSSTOG00000003634)	DDX27 (ENSSTOG00000003645) #7	ZNFX1 (ENSSTOG00000028176) #8	KCNB1 (ENSSTOG00000026242) #10	PTGIS (ENSSTOG00000019624) #11	B4GALT5 (ENSSTOG00000003851) #12	SLC9A8 (ENSSTOG00000027124) #13	SPATA2 (ENSSTOG00000025224) #14	RNF114 (ENSSTOG00000005727) #15	SNAI1 (ENSSTOG00000005866) #16	ENSSTOG00000014322	PEDS1 (ENSSTOG00000016416) #18	ENSSTOG00000025542 #20	RIPOR3 (ENSSTOG00000023513) #21	PARD6B (ENSSTOG00000009330) #22	ADNP (ENSSTOG00000023722) #23	ENSSTOG00000014659 #25	MOCS3 (ENSSTOG00000026585) #26	KCNG1 (ENSSTOG00000000015) #27	NFATC2 (ENSSTOG00000013460) #28	ATP9A (ENSSTOG00000024149) #29	SALL4 (ENSSTOG00000025002) #30	ZFP64 (ENSSTOG00000019989) #31	TSHZ2 (ENSSTOG00000008373) #32	ZNF217 (ENSSTOG00000013807) #33	BCAS1 (ENSSTOG00000028914) #34	CYP24A1 (ENSSTOG00000001968) #35	PFDN4 (ENSSTOG00000028253) #36	DOK5 (ENSSTOG00000028767)
Arctic ground squirrel	MODERN SPECIES	83	STAU1 (ENSUPAG00010022006)	DDX27 (ENSUPAG00010022011) #7	ZNFX1 (ENSUPAG00010022013) #8	KCNB1 (ENSUPAG00010000021) #10	PTGIS (ENSUPAG00010000049) #11	B4GALT5 (ENSUPAG00010000085) #12	SLC9A8 (ENSUPAG00010000132) #13	SPATA2 (ENSUPAG00010000256) #14	RNF114 (ENSUPAG00010000271) #15	SNAI1 (ENSUPAG00010000283) #16	ENSUPAG00010000293	ENSUPAG00010000318	CEBPB (ENSUPAG00010000335) #19	ENSUPAG00010000358 #20	RIPOR3 (ENSUPAG00010000410) #21	PARD6B (ENSUPAG00010000463) #22	ENSUPAG00010000474	ADNP (ENSUPAG00010000496) #23	ENSUPAG00010000511 #25	MOCS3 (ENSUPAG00010000719) #26	KCNG1 (ENSUPAG00010000726) #27	NFATC2 (ENSUPAG00010000747) #28	ATP9A (ENSUPAG00010000794) #29	SALL4 (ENSUPAG00010000889) #30	ZFP64 (ENSUPAG00010000898) #31	TSHZ2 (ENSUPAG00010000932) #32	ENSUPAG00010000940	ZNF217 (ENSUPAG00010000948) #33	BCAS1 (ENSUPAG00010000967) #34	CYP24A1 (ENSUPAG00010001072) #35	ENSUPAG00010001098 #36
Lagomorpha	ANCESTRAL SPECIES	249														ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29
Rabbit	MODERN SPECIES	555														PTPN1 (ENSOCUG00000008605) #20	RIPOR3 (ENSOCUG00000016769) #21	PARD6B (ENSOCUG00000015993) #22	BCAS4 (ENSOCUG00000014694)	ADNP (ENSOCUG00000014704) #23	DPM1 (ENSOCUG00000014708) #25	MOCS3 (ENSOCUG00000014721) #26	ENSOCUG00000011013 #27	NFATC2 (ENSOCUG00000012556) #28	ATP9A (ENSOCUG00000021416) #29
Pika	MODERN SPECIES	4317														PTPN1 (ENSOPRG00000001024) #20	RIPOR3 (ENSOPRG00000001048) #21	ENSOPRG00000001071 #22
Tree shrew	MODERN SPECIES	4354															ENSTBEG00000001382 #21	PARD6B (ENSTBEG00000002270) #22	BCAS4 (ENSTBEG00000002498)	ADNP (ENSTBEG00000002890) #23	DPM1 (ENSTBEG00000003795) #25
Primates	ANCESTRAL SPECIES	17	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00910000148217	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34
Haplorrhini	ANCESTRAL SPECIES	13	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000158854 #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Tarsier	MODERN SPECIES	3260																PARD6B (ENSTSYG00000012293) #22
Simiiformes	ANCESTRAL SPECIES	18	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00910000148217	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33
Catarrhini	ANCESTRAL SPECIES	19	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00910000148217	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660
Cercopithecidae	ANCESTRAL SPECIES	16	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33
Rhinopithecus	ANCESTRAL SPECIES	151	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00910000147818	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Black snub-nosed monkey	MODERN SPECIES	897	ZNFX1 (ENSRBIG00000041059) #8	ENSRBIG00000043627	ENSRBIG00000040052	KCNB1 (ENSRBIG00000035685) #10	PTGIS (ENSRBIG00000004920) #11	B4GALT5 (ENSRBIG00000032318) #12	ENSRBIG00000034464	SLC9A8 (ENSRBIG00000028870) #13	SPATA2 (ENSRBIG00000028973) #14	RNF114 (ENSRBIG00000026643) #15	SNAI1 (ENSRBIG00000026992) #16	ENSRBIG00000044255	PEDS1 (ENSRBIG00000043990) #18	PTPN1 (ENSRBIG00000011178) #20	RIPOR3 (ENSRBIG00000044567) #21	PARD6B (ENSRBIG00000033259) #22	BCAS4 (ENSRBIG00000040298)	ADNP (ENSRBIG00000027632) #23	DPM1 (ENSRBIG00000025547) #25	MOCS3 (ENSRBIG00000044580) #26	KCNG1 (ENSRBIG00000029539) #27	NFATC2 (ENSRBIG00000029008) #28	ATP9A (ENSRBIG00000028855) #29	SALL4 (ENSRBIG00000039876) #30	ZFP64 (ENSRBIG00000019844) #31	ENSRBIG00000044557	TSHZ2 (ENSRBIG00000023205) #32	ENSRBIG00000030503	ZNF217 (ENSRBIG00000044401) #33
Golden snub-nosed monkey	MODERN SPECIES	1077															ENSRROG00000019663	PARD6B (ENSRROG00000043087) #22	BCAS4 (ENSRROG00000044081)	ADNP (ENSRROG00000030887) #23	DPM1 (ENSRROG00000036379) #25	MOCS3 (ENSRROG00000006793) #26	KCNG1 (ENSRROG00000035240) #27	NFATC2 (ENSRROG00000043137) #28	ATP9A (ENSRROG00000041159) #29	SALL4 (ENSRROG00000036585) #30	ENSRROG00000039377	ZFP64 (ENSRROG00000042819) #31	TSHZ2 (ENSRROG00000036440) #32	ENSRROG00000014210	ZNF217 (ENSRROG00000045421) #33	BCAS1 (ENSRROG00000029559) #34	CYP24A1 (ENSRROG00000043791) #35
Cercopithecinae	ANCESTRAL SPECIES	19	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33
Vervet Monkey	MODERN SPECIES	11	CSE1L (ENSCSAG00000014977)	STAU1 (ENSCSAG00000014986)	DDX27 (ENSCSAG00000014996) #7	ENSCSAG00000015001 #8	KCNB1 (ENSCSAG00000015005) #10	PTGIS (ENSCSAG00000015010) #11	B4GALT5 (ENSCSAG00000015018) #12	SLC9A8 (ENSCSAG00000015029) #13	SPATA2 (ENSCSAG00000015033) #14	RNF114 (ENSCSAG00000015057) #15	SNAI1 (ENSCSAG00000015065) #16	PEDS1 (ENSCSAG00000015097) #18	CEBPB (ENSCSAG00000018746) #19	PTPN1 (ENSCSAG00000015111) #20	RIPOR3 (ENSCSAG00000015167) #21	PARD6B (ENSCSAG00000015184) #22	BCAS4 (ENSCSAG00000015199)	ADNP (ENSCSAG00000015205) #23	DPM1 (ENSCSAG00000015216) #25	MOCS3 (ENSCSAG00000018745) #26	KCNG1 (ENSCSAG00000015218) #27	NFATC2 (ENSCSAG00000015242) #28	ATP9A (ENSCSAG00000015260) #29	SALL4 (ENSCSAG00000015269) #30	ZFP64 (ENSCSAG00000015277) #31	TSHZ2 (ENSCSAG00000018744) #32	ENSCSAG00000018743	ZNF217 (ENSCSAG00000015287) #33	ENSCSAG00000018742	BCAS1 (ENSCSAG00000015313) #34	CYP24A1 (ENSCSAG00000015320) #35
Cercopithecinae_a	ANCESTRAL SPECIES	18	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33
Cercopithecinae_b	ANCESTRAL SPECIES	12	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33
Olive baboon	MODERN SPECIES	7	DDX27 (ENSPANG00000000820) #7	ZNFX1 (ENSPANG00000024121) #8	KCNB1 (ENSPANG00000020914) #10	PTGIS (ENSPANG00000007535) #11	B4GALT5 (ENSPANG00000004894) #12	ENSPANG00000041014	SLC9A8 (ENSPANG00000014247) #13	SPATA2 (ENSPANG00000020781) #14	RNF114 (ENSPANG00000040632) #15	SNAI1 (ENSPANG00000041191) #16	ENSPANG00000040021	PEDS1 (ENSPANG00000011164) #18	CEBPB (ENSPANG00000007537) #19	PTPN1 (ENSPANG00000011165) #20	RIPOR3 (ENSPANG00000020916) #21	PARD6B (ENSPANG00000007538) #22	BCAS4 (ENSPANG00000003915)	ADNP (ENSPANG00000021104) #23	DPM1 (ENSPANG00000034110) #25	MOCS3 (ENSPANG00000000373) #26	KCNG1 (ENSPANG00000014248) #27	NFATC2 (ENSPANG00000021791) #28	ATP9A (ENSPANG00000023209) #29	SALL4 (ENSPANG00000021792) #30	ZFP64 (ENSPANG00000021108) #31	TSHZ2 (ENSPANG00000049614) #32	ENSPANG00000004337	ZNF217 (ENSPANG00000020786) #33	ENSPANG00000038001	ENSPANG00000037067	BCAS1 (ENSPANG00000020784) #34
Cercopithecinae_d	ANCESTRAL SPECIES	47					ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00390000018318.u.b.a.b.a.b.e	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660
Drill	MODERN SPECIES	1109						PTGIS (ENSMLEG00000028340) #11	B4GALT5 (ENSMLEG00000033316) #12	SLC9A8 (ENSMLEG00000017126) #13	SPATA2 (ENSMLEG00000038990) #14	RNF114 (ENSMLEG00000030679) #15	SNAI1 (ENSMLEG00000039236) #16	ENSMLEG00000013157	PEDS1 (ENSMLEG00000033014) #18	PTPN1 (ENSMLEG00000026021) #20	RIPOR3 (ENSMLEG00000013091) #21	PARD6B (ENSMLEG00000035752) #22	BCAS4 (ENSMLEG00000006856)	ADNP (ENSMLEG00000033499) #23	ENSMLEG00000034105	DPM1 (ENSMLEG00000030857) #25	MOCS3 (ENSMLEG00000027324) #26	KCNG1 (ENSMLEG00000041045) #27
Sooty mangabey	MODERN SPECIES	648			PTGIS (ENSCATG00000013706) #11	B4GALT5 (ENSCATG00000039260) #12	SLC9A8 (ENSCATG00000044367) #13	SPATA2 (ENSCATG00000012860) #14	RNF114 (ENSCATG00000029285) #15	ENSCATG00000035681	SNAI1 (ENSCATG00000041452) #16	ENSCATG00000039056	PEDS1 (ENSCATG00000041753) #18	CEBPB (ENSCATG00000020712) #19	PTPN1 (ENSCATG00000040422) #20	ENSCATG00000039168	RIPOR3 (ENSCATG00000037442) #21	PARD6B (ENSCATG00000006757) #22	BCAS4 (ENSCATG00000041470)	ENSCATG00000000447	ADNP (ENSCATG00000044453) #23	DPM1 (ENSCATG00000043688) #25	MOCS3 (ENSCATG00000015208) #26	KCNG1 (ENSCATG00000040592) #27	ENSCATG00000020597	NFATC2 (ENSCATG00000042896) #28	ATP9A (ENSCATG00000044505) #29	SALL4 (ENSCATG00000030757) #30	ENSCATG00000041010	ZFP64 (ENSCATG00000042266) #31	TSHZ2 (ENSCATG00000039930) #32	ENSCATG00000022997	ZNF217 (ENSCATG00000032669) #33
Macaca	ANCESTRAL SPECIES	16	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00940000154319.u.a.d	ENSGT00390000003167 #34
Pig-tailed macaque	MODERN SPECIES	462	ZNFX1 (ENSMNEG00000037146) #8	KCNB1 (ENSMNEG00000020853) #10	PTGIS (ENSMNEG00000036124) #11	B4GALT5 (ENSMNEG00000040159) #12	ENSMNEG00000040706	SLC9A8 (ENSMNEG00000029634) #13	SPATA2 (ENSMNEG00000040643) #14	RNF114 (ENSMNEG00000042308) #15	SNAI1 (ENSMNEG00000036933) #16	ENSMNEG00000044185	PEDS1 (ENSMNEG00000042824) #18	CEBPB (ENSMNEG00000008052) #19	PTPN1 (ENSMNEG00000037262) #20	RIPOR3 (ENSMNEG00000034821) #21	ENSMNEG00000010103	PARD6B (ENSMNEG00000035151) #22	ENSMNEG00000028660	ADNP (ENSMNEG00000042761) #23	DPM1 (ENSMNEG00000034717) #25	MOCS3 (ENSMNEG00000011056) #26	KCNG1 (ENSMNEG00000029109) #27	NFATC2 (ENSMNEG00000034579) #28	ATP9A (ENSMNEG00000023182) #29	SALL4 (ENSMNEG00000035995) #30	ENSMNEG00000034407	ZFP64 (ENSMNEG00000040581) #31	TSHZ2 (ENSMNEG00000040060) #32	ENSMNEG00000028135	ZNF217 (ENSMNEG00000029796) #33	BCAS1 (ENSMNEG00000039962) #34	CYP24A1 (ENSMNEG00000039138) #35
Macaca_a	ANCESTRAL SPECIES	18	ENSGT00550000074884	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00940000159884 #33	ENSGT00940000154319.u.a.d	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Rhesus	MODERN SPECIES	1	ENSMMUG00000062795	DDX27 (ENSMMUG00000023621) #7	ZNFX1 (ENSMMUG00000023623) #8	ENSMMUG00000058919	KCNB1 (ENSMMUG00000006442) #10	PTGIS (ENSMMUG00000021692) #11	B4GALT5 (ENSMMUG00000002124) #12	SLC9A8 (ENSMMUG00000002715) #13	SPATA2 (ENSMMUG00000000740) #14	RNF114 (ENSMMUG00000000757) #15	SNAI1 (ENSMMUG00000063295) #16	UBE2V1 (ENSMMUG00000012228) #18	CEBPB (ENSMMUG00000045219) #19	PTPN1 (ENSMMUG00000007878) #20	RIPOR3 (ENSMMUG00000007883) #21	PARD6B (ENSMMUG00000064108) #22	BCAS4 (ENSMMUG00000012127)	ADNP (ENSMMUG00000002761) #23	DPM1 (ENSMMUG00000002759) #25	MOCS3 (ENSMMUG00000002758) #26	KCNG1 (ENSMMUG00000000683) #27	NFATC2 (ENSMMUG00000012657) #28	ATP9A (ENSMMUG00000000918) #29	ENSMMUG00000062664	ENSMMUG00000064070	SALL4 (ENSMMUG00000003870) #30	ZFP64 (ENSMMUG00000018846) #31	TSHZ2 (ENSMMUG00000013035) #32	ZNF217 (ENSMMUG00000018358) #33	ENSMMUG00000043345	BCAS1 (ENSMMUG00000020082) #34
Crab-eating macaque	MODERN SPECIES	1	DDX27 (ENSMFAG00000045749) #7	ZNFX1 (ENSMFAG00000040759) #8	KCNB1 (ENSMFAG00000003724) #10	PTGIS (ENSMFAG00000033233) #11	B4GALT5 (ENSMFAG00000037307) #12	ENSMFAG00000063570	SLC9A8 (ENSMFAG00000002040) #13	SPATA2 (ENSMFAG00000041088) #14	RNF114 (ENSMFAG00000001669) #15	SNAI1 (ENSMFAG00000048456) #16	PEDS1 (ENSMFAG00000044984) #18	ENSMFAG00000050903	ENSMFAG00000058174 #19	PTPN1 (ENSMFAG00000033177) #20	RIPOR3 (ENSMFAG00000034413) #21	PARD6B (ENSMFAG00000007135) #22	ENSMFAG00000015516	ENSMFAG00000059434	ENSMFAG00000064118	ADNP (ENSMFAG00000042512) #23	DPM1 (ENSMFAG00000036839) #25	MOCS3 (ENSMFAG00000060225) #26	NFATC2 (ENSMFAG00000044962) #28	ATP9A (ENSMFAG00000001634) #29	ENSMFAG00000054797	SALL4 (ENSMFAG00000027169) #30	ZFP64 (ENSMFAG00000034598) #31	ENSMFAG00000060520	ENSMFAG00000063669	TSHZ2 (ENSMFAG00000044946) #32	ZNF217 (ENSMFAG00000041447) #33
Hominoidea	ANCESTRAL SPECIES	17	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT01090000260115
Gibbon	MODERN SPECIES	3	DDX27 (ENSNLEG00000006961) #7	ZNFX1 (ENSNLEG00000006965) #8	KCNB1 (ENSNLEG00000006970) #10	PTGIS (ENSNLEG00000006971) #11	B4GALT5 (ENSNLEG00000006975) #12	ENSNLEG00000029455	SLC9A8 (ENSNLEG00000006976) #13	SPATA2 (ENSNLEG00000006982) #14	ENSNLEG00000032221	RNF114 (ENSNLEG00000006984) #15	SNAI1 (ENSNLEG00000006985) #16	ENSNLEG00000006987	PEDS1 (ENSNLEG00000029433) #18	ENSNLEG00000030867 #20	RIPOR3 (ENSNLEG00000006989) #21	PARD6B (ENSNLEG00000006993) #22	ENSNLEG00000019226	ENSNLEG00000006994	ADNP (ENSNLEG00000006995) #23	DPM1 (ENSNLEG00000006998) #25	MOCS3 (ENSNLEG00000019227) #26	KCNG1 (ENSNLEG00000007001) #27	ENSNLEG00000019228	NFATC2 (ENSNLEG00000007002) #28	ENSNLEG00000034112	ATP9A (ENSNLEG00000007005) #29	SALL4 (ENSNLEG00000007013) #30	ENSNLEG00000034384	ZFP64 (ENSNLEG00000007015) #31	TSHZ2 (ENSNLEG00000007016) #32	ENSNLEG00000028918
Hominidae	ANCESTRAL SPECIES	18	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	16	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00910000148217	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660
Homo/Pan group	ANCESTRAL SPECIES	17	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00910000148217	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660
Pan	ANCESTRAL SPECIES	15	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000154818.a.b	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00910000147046	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00910000148217	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00390000018566.j	ENSGT00950000183051.a.b #32	ENSGT00560000078660
Bonobo	MODERN SPECIES	11	DDX27 (ENSPPAG00000035843) #7	ZNFX1 (ENSPPAG00000032191) #8	KCNB1 (ENSPPAG00000030007) #10	PTGIS (ENSPPAG00000042097) #11	B4GALT5 (ENSPPAG00000029604) #12	ENSPPAG00000037544	SLC9A8 (ENSPPAG00000035233) #13	SPATA2 (ENSPPAG00000028008) #14	RNF114 (ENSPPAG00000043607) #15	SNAI1 (ENSPPAG00000041096) #16	ENSPPAG00000028780	PEDS1 (ENSPPAG00000028727) #18	PTPN1 (ENSPPAG00000027528) #20	RIPOR3 (ENSPPAG00000033751) #21	ENSPPAG00000029645	PARD6B (ENSPPAG00000038274) #22	ENSPPAG00000031066	ADNP (ENSPPAG00000035684) #23	ENSPPAG00000035180	ENSPPAG00000038880	DPM1 (ENSPPAG00000042946) #25	MOCS3 (ENSPPAG00000008891) #26	KCNG1 (ENSPPAG00000032019) #27	NFATC2 (ENSPPAG00000040722) #28	ENSPPAG00000042667	ATP9A (ENSPPAG00000030836) #29	SALL4 (ENSPPAG00000038064) #30	ZFP64 (ENSPPAG00000028816) #31	ENSPPAG00000040778	TSHZ2 (ENSPPAG00000031686) #32	ENSPPAG00000032773
Chimpanzee	MODERN SPECIES	11	ZNFX1 (ENSPTRG00000013603) #8	KCNB1 (ENSPTRG00000013607) #10	PTGIS (ENSPTRG00000013608) #11	B4GALT5 (ENSPTRG00000013609) #12	ENSPTRG00000043814	SLC9A8 (ENSPTRG00000023101) #13	SPATA2 (ENSPTRG00000013611) #14	RNF114 (ENSPTRG00000013613) #15	SNAI1 (ENSPTRG00000050285) #16	UBE2V1 (ENSPTRG00000013615)	PEDS1 (ENSPTRG00000040435) #18	CEBPB (ENSPTRG00000048989) #19	PTPN1 (ENSPTRG00000023575) #20	RIPOR3 (ENSPTRG00000013619) #21	ENSPTRG00000050570	PARD6B (ENSPTRG00000013620) #22	BCAS4 (ENSPTRG00000013621)	ADNP (ENSPTRG00000013623) #23	ENSPTRG00000048134	ENSPTRG00000045082	DPM1 (ENSPTRG00000013625) #25	MOCS3 (ENSPTRG00000013626) #26	KCNG1 (ENSPTRG00000013627) #27	NFATC2 (ENSPTRG00000013628) #28	ENSPTRG00000052402	ATP9A (ENSPTRG00000013629) #29	SALL4 (ENSPTRG00000013631) #30	ZFP64 (ENSPTRG00000013632) #31	ENSPTRG00000052453	TSHZ2 (ENSPTRG00000013634) #32	ENSPTRG00000044495
Human	MODERN SPECIES	12	DDX27 (ENSG00000124228) #7	ZNFX1 (ENSG00000124201) #8	KCNB1 (ENSG00000158445) #10	PTGIS (ENSG00000124212) #11	B4GALT5 (ENSG00000158470) #12	SLC9A8 (ENSG00000197818) #13	SPATA2 (ENSG00000158480) #14	RNF114 (ENSG00000124226) #15	SNAI1 (ENSG00000124216) #16	UBE2V1 (ENSG00000244687) #17	PEDS1-UBE2V1 (ENSG00000124208)	PEDS1 (ENSG00000240849) #18	CEBPB (ENSG00000172216) #19	PTPN1 (ENSG00000196396) #20	RIPOR3 (ENSG00000042062) #21	PARD6B (ENSG00000124171) #22	BCAS4 (ENSG00000124243)	ADNP (ENSG00000101126) #23	DPM1 (ENSG00000000419) #25	MOCS3 (ENSG00000124217) #26	KCNG1 (ENSG00000026559) #27	NFATC2 (ENSG00000101096) #28	ATP9A (ENSG00000054793) #29	SALL4 (ENSG00000101115) #30	ZFP64 (ENSG00000020256) #31	TSHZ2 (ENSG00000182463) #32	ZNF217 (ENSG00000171940) #33	BCAS1 (ENSG00000064787) #34	CYP24A1 (ENSG00000019186) #35	PFDN4 (ENSG00000101132) #36	DOK5 (ENSG00000101134)
Gorilla	MODERN SPECIES	11	ENSGGOG00000015474 #7	ZNFX1 (ENSGGOG00000008501) #8	KCNB1 (ENSGGOG00000006890) #10	B4GALT5 (ENSGGOG00000042822) #12	ENSGGOG00000043763	ENSGGOG00000039936	SLC9A8 (ENSGGOG00000001956) #13	SPATA2 (ENSGGOG00000027397) #14	RNF114 (ENSGGOG00000028049) #15	SNAI1 (ENSGGOG00000024422) #16	ENSGGOG00000040133	PEDS1 (ENSGGOG00000015114) #18	CEBPB (ENSGGOG00000043045) #19	PTPN1 (ENSGGOG00000007036) #20	RIPOR3 (ENSGGOG00000007043) #21	PARD6B (ENSGGOG00000010338) #22	ENSGGOG00000025933	ADNP (ENSGGOG00000003120) #23	ENSGGOG00000040026	ENSGGOG00000038274	DPM1 (ENSGGOG00000008993) #25	MOCS3 (ENSGGOG00000008999) #26	KCNG1 (ENSGGOG00000000844) #27	NFATC2 (ENSGGOG00000024518) #28	ENSGGOG00000040795	ATP9A (ENSGGOG00000016586) #29	SALL4 (ENSGGOG00000001832) #30	ZFP64 (ENSGGOG00000012030) #31	ENSGGOG00000026918	TSHZ2 (ENSGGOG00000005282) #32	ENSGGOG00000043241
Orangutan	MODERN SPECIES	11	CSE1L (ENSPPYG00000011110)	STAU1 (ENSPPYG00000011111)	DDX27 (ENSPPYG00000011113) #7	ZNFX1 (ENSPPYG00000011114) #8	KCNB1 (ENSPPYG00000011116) #10	PTGIS (ENSPPYG00000011117) #11	B4GALT5 (ENSPPYG00000011118) #12	SLC9A8 (ENSPPYG00000011119) #13	SPATA2 (ENSPPYG00000011120) #14	RNF114 (ENSPPYG00000011121) #15	SNAI1 (ENSPPYG00000011122) #16	UBE2V1 (ENSPPYG00000011123) #18	CEBPB (ENSPPYG00000011124) #19	PTPN1 (ENSPPYG00000011126) #20	RIPOR3 (ENSPPYG00000011127) #21	PARD6B (ENSPPYG00000038640) #22	ENSPPYG00000037475	ENSPPYG00000030749	ADNP (ENSPPYG00000011130) #23	DPM1 (ENSPPYG00000011131) #25	MOCS3 (ENSPPYG00000011132) #26	KCNG1 (ENSPPYG00000011133) #27	NFATC2 (ENSPPYG00000011135) #28	ENSPPYG00000011136 #29	SALL4 (ENSPPYG00000011138) #30	ENSPPYG00000019918	ZFP64 (ENSPPYG00000011139) #31	TSHZ2 (ENSPPYG00000011269) #32	ENSPPYG00000037756	ZNF217 (ENSPPYG00000011140) #33	BCAS1 (ENSPPYG00000011142) #34
Platyrrhini	ANCESTRAL SPECIES	11	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041.c.a #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153404.a.m.b	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884.a #33	ENSGT00940000154319.u.a
Mas night monkey	MODERN SPECIES	1347	ENSANAG00000006331	DDX27 (ENSANAG00000036257) #7	ZNFX1 (ENSANAG00000034022) #8	KCNB1 (ENSANAG00000035917) #10	PTGIS (ENSANAG00000038517) #11	B4GALT5 (ENSANAG00000036885) #12	SLC9A8 (ENSANAG00000029813) #13	SPATA2 (ENSANAG00000033405) #14	ENSANAG00000022297 #15	SNAI1 (ENSANAG00000028666) #16	ENSANAG00000038531	PEDS1 (ENSANAG00000027579) #18	CEBPB (ENSANAG00000026101) #19	ENSANAG00000030593 #20	RIPOR3 (ENSANAG00000024708) #21	PARD6B (ENSANAG00000024355) #22	BCAS4 (ENSANAG00000036456)	ADNP (ENSANAG00000035777) #23	ENSANAG00000026501	DPM1 (ENSANAG00000030552) #25	MOCS3 (ENSANAG00000003316) #26	KCNG1 (ENSANAG00000036536) #27	NFATC2 (ENSANAG00000034927) #28	ATP9A (ENSANAG00000032631) #29	SALL4 (ENSANAG00000023352) #30	ZFP64 (ENSANAG00000034694) #31	TSHZ2 (ENSANAG00000038357) #32	ENSANAG00000005571	ENSANAG00000036769 #33	ENSANAG00000028551	BCAS1 (ENSANAG00000019184) #34
Cebidae	ANCESTRAL SPECIES	13	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041.c.a #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884.a #33	ENSGT00940000154319.u.a	ENSGT00390000003167 #34
Marmoset	MODERN SPECIES	17	STAU1 (ENSCJAG00000016233)	DDX27 (ENSCJAG00000016135) #7	ZNFX1 (ENSCJAG00000016115) #8	KCNB1 (ENSCJAG00000022600) #10	PTGIS (ENSCJAG00000000578) #11	B4GALT5 (ENSCJAG00000038408) #12	SLC9A8 (ENSCJAG00000000466) #13	SPATA2 (ENSCJAG00000041816) #14	RNF114 (ENSCJAG00000000510) #15	SNAI1 (ENSCJAG00000073906) #16	UBE2V1 (ENSCJAG00000039715)	PEDS1 (ENSCJAG00000072528) #18	CEBPB (ENSCJAG00000038265) #19	ENSCJAG00000000531 #20	RIPOR3 (ENSCJAG00000000534) #21	PARD6B (ENSCJAG00000044244) #22	BCAS4 (ENSCJAG00000000562)	ADNP (ENSCJAG00000000563) #23	DPM1 (ENSCJAG00000000551) #25	MOCS3 (ENSCJAG00000023186) #26	KCNG1 (ENSCJAG00000000570) #27	NFATC2 (ENSCJAG00000000574) #28	ATP9A (ENSCJAG00000000586) #29	ENSCJAG00000000591 #30	ZFP64 (ENSCJAG00000000596) #31	TSHZ2 (ENSCJAG00000000609) #32	ENSCJAG00000040137	ENSCJAG00000076838	ZNF217 (ENSCJAG00000000615) #33	ENSCJAG00000075669	ENSCJAG00000081777
Cebidae_a	ANCESTRAL SPECIES	2	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041.d #20	ENSGT00940000158041.c.a #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884.a #33	ENSGT00940000154319.u.a	ENSGT00390000003167 #34
Capuchin	MODERN SPECIES	224														PTPN1 (ENSCCAG00000023451) #20	RIPOR3 (ENSCCAG00000031037) #21	PARD6B (ENSCCAG00000025810) #22	BCAS4 (ENSCCAG00000022933)	ADNP (ENSCCAG00000034384) #23	DPM1 (ENSCCAG00000027064) #25	MOCS3 (ENSCCAG00000032344) #26	KCNG1 (ENSCCAG00000034975) #27	NFATC2 (ENSCCAG00000025112) #28	ENSCCAG00000031561	ATP9A (ENSCCAG00000027234) #29	ENSCCAG00000029512 #30	ZFP64 (ENSCCAG00000033968) #31	TSHZ2 (ENSCCAG00000021876) #32	ENSCCAG00000020419	ENSCCAG00000034411 #33	ENSCCAG00000025469	BCAS1 (ENSCCAG00000033293) #34
Bolivian squirrel monkey	MODERN SPECIES	93	ENSSBOG00000001880	DDX27 (ENSSBOG00000034281) #7	ZNFX1 (ENSSBOG00000024677) #8	KCNB1 (ENSSBOG00000030068) #10	PTGIS (ENSSBOG00000032693) #11	B4GALT5 (ENSSBOG00000012698) #12	ENSSBOG00000030451	SLC9A8 (ENSSBOG00000008701) #13	SPATA2 (ENSSBOG00000027105) #14	RNF114 (ENSSBOG00000027055) #15	SNAI1 (ENSSBOG00000034760) #16	ENSSBOG00000028538	PEDS1 (ENSSBOG00000000313) #18	ENSSBOG00000021238 #20	RIPOR3 (ENSSBOG00000020304) #21	PARD6B (ENSSBOG00000033004) #22	BCAS4 (ENSSBOG00000031019)	ADNP (ENSSBOG00000031931) #23	DPM1 (ENSSBOG00000035012) #25	MOCS3 (ENSSBOG00000016142) #26	KCNG1 (ENSSBOG00000030989) #27	NFATC2 (ENSSBOG00000023445) #28	ENSSBOG00000020755	ATP9A (ENSSBOG00000018293) #29	SALL4 (ENSSBOG00000030011) #30	ZFP64 (ENSSBOG00000026654) #31	TSHZ2 (ENSSBOG00000024081) #32	ENSSBOG00000018726	ZNF217 (ENSSBOG00000023737) #33	ENSSBOG00000017716	BCAS1 (ENSSBOG00000027776) #34
Strepsirrhini	ANCESTRAL SPECIES	12	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00910000148217	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Bushbaby	MODERN SPECIES	138	DDX27 (ENSOGAG00000002130) #7	ZNFX1 (ENSOGAG00000002132) #8	ENSOGAG00000029920	KCNB1 (ENSOGAG00000025413) #10	PTGIS (ENSOGAG00000012037) #11	B4GALT5 (ENSOGAG00000002134) #12	SLC9A8 (ENSOGAG00000007196) #13	SPATA2 (ENSOGAG00000007201) #14	RNF114 (ENSOGAG00000003953) #15	SNAI1 (ENSOGAG00000030111) #16	ENSOGAG00000025894	PEDS1 (ENSOGAG00000009132) #18	CEBPB (ENSOGAG00000026467) #19	PTPN1 (ENSOGAG00000005483) #20	RIPOR3 (ENSOGAG00000005486) #21	PARD6B (ENSOGAG00000005490) #22	BCAS4 (ENSOGAG00000005491)	ADNP (ENSOGAG00000005381) #23	DPM1 (ENSOGAG00000005384) #25	MOCS3 (ENSOGAG00000030283) #26	KCNG1 (ENSOGAG00000028070) #27	NFATC2 (ENSOGAG00000013787) #28	ATP9A (ENSOGAG00000013793) #29	SALL4 (ENSOGAG00000013799) #30	ZFP64 (ENSOGAG00000005192) #31	TSHZ2 (ENSOGAG00000008544) #32	ENSOGAG00000033043	ZNF217 (ENSOGAG00000001685) #33	BCAS1 (ENSOGAG00000000952) #34	CYP24A1 (ENSOGAG00000016370) #35	PFDN4 (ENSOGAG00000016375) #36
Lemuriformes	ANCESTRAL SPECIES	10	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00910000148217	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Mouse lemur	MODERN SPECIES	9	STAU1 (ENSMICG00000001995)	DDX27 (ENSMICG00000002005) #7	ZNFX1 (ENSMICG00000002013) #8	KCNB1 (ENSMICG00000042395) #10	PTGIS (ENSMICG00000017617) #11	B4GALT5 (ENSMICG00000036109) #12	SLC9A8 (ENSMICG00000011138) #13	SPATA2 (ENSMICG00000029981) #14	RNF114 (ENSMICG00000029402) #15	SNAI1 (ENSMICG00000042228) #16	ENSMICG00000011166	ENSMICG00000047905	CEBPB (ENSMICG00000035606) #19	PTPN1 (ENSMICG00000017702) #20	RIPOR3 (ENSMICG00000017704) #21	PARD6B (ENSMICG00000032853) #22	BCAS4 (ENSMICG00000015943)	ADNP (ENSMICG00000027969) #23	DPM1 (ENSMICG00000003186) #25	KCNG1 (ENSMICG00000032333) #27	NFATC2 (ENSMICG00000000025) #28	ATP9A (ENSMICG00000000026) #29	SALL4 (ENSMICG00000000027) #30	ENSMICG00000047411	ZFP64 (ENSMICG00000034213) #31	TSHZ2 (ENSMICG00000035295) #32	ENSMICG00000028159	BANF2 (ENSMICG00000032062)	RRBP1 (ENSMICG00000013693)	DSTN (ENSMICG00000035158)	BFSP1 (ENSMICG00000028889)
Lemuriformes_a	ANCESTRAL SPECIES	70	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00910000148217	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Greater bamboo lemur	MODERN SPECIES	301	DDX27 (ENSPSMG00000012321) #7	ZNFX1 (ENSPSMG00000012403) #8	ENSPSMG00000012474	KCNB1 (ENSPSMG00000012485) #10	PTGIS (ENSPSMG00000012523) #11	B4GALT5 (ENSPSMG00000012547) #12	SLC9A8 (ENSPSMG00000012605) #13	SPATA2 (ENSPSMG00000012618) #14	RNF114 (ENSPSMG00000012630) #15	SNAI1 (ENSPSMG00000012652) #16	ENSPSMG00000012726	PEDS1 (ENSPSMG00000012778) #18	CEBPB (ENSPSMG00000012787) #19	PTPN1 (ENSPSMG00000012808) #20	RIPOR3 (ENSPSMG00000012833) #21	PARD6B (ENSPSMG00000012840) #22	ENSPSMG00000012844	ENSPSMG00000012850	ADNP (ENSPSMG00000012865) #23	DPM1 (ENSPSMG00000012878) #25	MOCS3 (ENSPSMG00000012882) #26	KCNG1 (ENSPSMG00000012892) #27	NFATC2 (ENSPSMG00000012934) #28	ATP9A (ENSPSMG00000013024) #29	ENSPSMG00000013048 #30	ZFP64 (ENSPSMG00000013089) #31
Coquerels sifaka	MODERN SPECIES	896														PTPN1 (ENSPCOG00000015888) #20	RIPOR3 (ENSPCOG00000013516) #21	ENSPCOG00000023098 #22	BCAS4 (ENSPCOG00000016341)	ADNP (ENSPCOG00000014574) #23	DPM1 (ENSPCOG00000013837) #25	KCNG1 (ENSPCOG00000025006) #27
Laurasiatheria	ANCESTRAL SPECIES	17	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00910000148217	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000183211.a.a.a #22
Hedgehog	MODERN SPECIES	14913																PARD6B (ENSEEUG00000011455) #22
Laurasiatheria_a	ANCESTRAL SPECIES	18	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00910000148217	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34
Laurasiatheria_b	ANCESTRAL SPECIES	19	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00910000148217	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34
Laurasiatheria_c	ANCESTRAL SPECIES	17	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Equus	ANCESTRAL SPECIES	8	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Donkey	MODERN SPECIES	6	ENSEASG00005026774	ENSEASG00005027561	KCNB1 (ENSEASG00005023332) #10	PTGIS (ENSEASG00005023331) #11	B4GALT5 (ENSEASG00005023329) #12	SLC9A8 (ENSEASG00005023327) #13	ENSEASG00005026401	SPATA2 (ENSEASG00005034211) #14	RNF114 (ENSEASG00005023324) #15	SNAI1 (ENSEASG00005030794) #16	ENSEASG00005029999	PEDS1 (ENSEASG00005023319) #18	ENSEASG00005024380 #19	PTPN1 (ENSEASG00005023312) #20	RIPOR3 (ENSEASG00005023308) #21	PARD6B (ENSEASG00005031803) #22	ENSEASG00005038449	ADNP (ENSEASG00005023304) #23	DPM1 (ENSEASG00005023302) #25	MOCS3 (ENSEASG00005023301) #26	KCNG1 (ENSEASG00005023299) #27	NFATC2 (ENSEASG00005023295) #28	ATP9A (ENSEASG00005023291) #29	SALL4 (ENSEASG00005023290) #30	ENSEASG00005031550 #31	ZFP64 (ENSEASG00005023288) #31	TSHZ2 (ENSEASG00005023286) #32	ENSEASG00005023285	ENSEASG00005023284	ZNF217 (ENSEASG00005023283) #33	BCAS1 (ENSEASG00005023282) #34
Horse	MODERN SPECIES	14	ZNFX1 (ENSECAG00000008210) #8	ENSECAG00000015235	KCNB1 (ENSECAG00000016080) #10	PTGIS (ENSECAG00000016521) #11	B4GALT5 (ENSECAG00000022249) #12	SLC9A8 (ENSECAG00000004260) #13	ENSECAG00000004411	SPATA2 (ENSECAG00000007234) #14	RNF114 (ENSECAG00000007250) #15	PEDS1 (ENSECAG00000015236) #18	SNAI1 (ENSECAG00000009787) #16	UBE2V1 (ENSECAG00000011858)	CEBPB (ENSECAG00000027770) #19	PTPN1 (ENSECAG00000019772) #20	RIPOR3 (ENSECAG00000004962) #21	PARD6B (ENSECAG00000009294) #22	BCAS4 (ENSECAG00000038338)	ADNP (ENSECAG00000009307) #23	MOCS3 (ENSECAG00000004476) #26	DPM1 (ENSECAG00000011277) #25	KCNG1 (ENSECAG00000017924) #27	NFATC2 (ENSECAG00000018997) #28	ATP9A (ENSECAG00000020949) #29	SALL4 (ENSECAG00000018533) #30	ENSECAG00000052741 #31	ZFP64 (ENSECAG00000021570) #31	TSHZ2 (ENSECAG00000010856) #32	ENSECAG00000040326	ZNF217 (ENSECAG00000011966) #33	BCAS1 (ENSECAG00000013155) #34	CYP24A1 (ENSECAG00000016322) #35
Chiroptera	ANCESTRAL SPECIES	7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00390000009113.a.b	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Megabat	MODERN SPECIES	6112																PARD6B (ENSPVAG00000016479) #22	BCAS4 (ENSPVAG00000016480)	ADNP (ENSPVAG00000016481) #23	DPM1 (ENSPVAG00000016483) #25
Microchiroptera	ANCESTRAL SPECIES	6	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Greater horseshoe bat	MODERN SPECIES	15	STAU1 (ENSRFEG00010015534)	DDX27 (ENSRFEG00010015195) #7	ZNFX1 (ENSRFEG00010015143) #8	ENSRFEG00010015029	KCNB1 (ENSRFEG00010014973) #10	PTGIS (ENSRFEG00010014928) #11	B4GALT5 (ENSRFEG00010014884) #12	SLC9A8 (ENSRFEG00010014326) #13	SPATA2 (ENSRFEG00010014280) #14	RNF114 (ENSRFEG00010014230) #15	SNAI1 (ENSRFEG00010014179) #16	ENSRFEG00010013971	PEDS1 (ENSRFEG00010013707) #18	PTPN1 (ENSRFEG00010013609) #20	RIPOR3 (ENSRFEG00010013491) #21	PARD6B (ENSRFEG00010013439) #22	BCAS4 (ENSRFEG00010013389)	ADNP (ENSRFEG00010013316) #23	DPM1 (ENSRFEG00010013174) #25	MOCS3 (ENSRFEG00010013157) #26	KCNG1 (ENSRFEG00010013123) #27	NFATC2 (ENSRFEG00010012829) #28	ENSRFEG00010012770	ATP9A (ENSRFEG00010012611) #29	SALL4 (ENSRFEG00010012441) #30	ZFP64 (ENSRFEG00010012242) #31	TSHZ2 (ENSRFEG00010012218) #32	ENSRFEG00010012201	ZNF217 (ENSRFEG00010012136) #33	BCAS1 (ENSRFEG00010011942) #34	CYP24A1 (ENSRFEG00010011474) #35
Microbat	MODERN SPECIES	1152	STAU1 (ENSMLUG00000008407)	DDX27 (ENSMLUG00000003186) #7	ZNFX1 (ENSMLUG00000003202) #8	KCNB1 (ENSMLUG00000003207) #10	PTGIS (ENSMLUG00000003210) #11	B4GALT5 (ENSMLUG00000013099) #12	SLC9A8 (ENSMLUG00000015033) #13	SPATA2 (ENSMLUG00000015042) #14	RNF114 (ENSMLUG00000015045) #15	ENSMLUG00000015053 #16	ENSMLUG00000003236	PEDS1 (ENSMLUG00000022209) #18	CEBPB (ENSMLUG00000002060) #19	PTPN1 (ENSMLUG00000014398) #20	RIPOR3 (ENSMLUG00000014411) #21	PARD6B (ENSMLUG00000013370) #22	ENSMLUG00000013375	ADNP (ENSMLUG00000000002) #23	DPM1 (ENSMLUG00000000003) #25	MOCS3 (ENSMLUG00000022448) #26	KCNG1 (ENSMLUG00000000004) #27	NFATC2 (ENSMLUG00000014668) #28	ENSMLUG00000007022 #29	ENSMLUG00000007060 #30	ENSMLUG00000015076
Carnivora	ANCESTRAL SPECIES	20	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00910000148217	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34
Caniformia	ANCESTRAL SPECIES		ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00910000148217	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Caniformia_b	ANCESTRAL SPECIES		ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000162354 #18	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Ursidae	ANCESTRAL SPECIES	14	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230.a #28	ENSGT00940000156230.b #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Ursus	ANCESTRAL SPECIES	1	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230.a #28	ENSGT00940000156230.b #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
American black bear	DUPLICATION
American black bear	MODERN SPECIES	91																ENSUAMG00000021138 #22
American black bear	MODERN SPECIES	2612																ENSUAMG00000024579 #22	ENSUAMG00000024573	UPF3B (ENSUAMG00000024565)	ENSUAMG00000024564	ENSUAMG00000024562	ENSUAMG00000024561
Polar bear	DUPLICATION
Polar bear	MODERN SPECIES	298	CT83 (ENSUMAG00000019530)	KLHL13 (ENSUMAG00000019537)	WDR44 (ENSUMAG00000019545)	ENSUMAG00000019551	ENSUMAG00000000062	ENSUMAG00000000730	IL13RA1 (ENSUMAG00000002031)	ENSUMAG00000002035	ENSUMAG00000002060	ENSUMAG00000002083	ENSUMAG00000002093	SLC25A5 (ENSUMAG00000002112)	STEEP1 (ENSUMAG00000002124)	UBE2A (ENSUMAG00000002128)	NKRF (ENSUMAG00000002134)	ENSUMAG00000002144 #22	ENSUMAG00000002146	UPF3B (ENSUMAG00000002150)	ENSUMAG00000002167	ENSUMAG00000002182	ENSUMAG00000002185
Polar bear	MODERN SPECIES	211	STAU1 (ENSUMAG00000024475)	DDX27 (ENSUMAG00000024473) #7	ZNFX1 (ENSUMAG00000024472) #8	KCNB1 (ENSUMAG00000024465) #10	PTGIS (ENSUMAG00000024464) #11	B4GALT5 (ENSUMAG00000024463) #12	SLC9A8 (ENSUMAG00000024462) #13	ENSUMAG00000024461	SPATA2 (ENSUMAG00000024460) #14	RNF114 (ENSUMAG00000024459) #15	SNAI1 (ENSUMAG00000024458) #16	UBE2V1 (ENSUMAG00000024454) #17	PEDS1 (ENSUMAG00000024453) #18	PTPN1 (ENSUMAG00000024451) #20	RIPOR3 (ENSUMAG00000024450) #21	ENSUMAG00000024449 #22	BCAS4 (ENSUMAG00000024448)	ADNP (ENSUMAG00000024447) #23	DPM1 (ENSUMAG00000024446) #25	MOCS3 (ENSUMAG00000024445) #26	ENSUMAG00000024442 #28	ATP9A (ENSUMAG00000024314) #29	SALL4 (ENSUMAG00000024274) #30	ZFP64 (ENSUMAG00000024271) #31	TSHZ2 (ENSUMAG00000024266) #32	ENSUMAG00000024265	ZNF217 (ENSUMAG00000024263) #33	BCAS1 (ENSUMAG00000024242) #34	CYP24A1 (ENSUMAG00000024233) #35	PFDN4 (ENSUMAG00000024230) #36
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	4	DDX27 (ENSAMEG00000013627) #7	ZNFX1 (ENSAMEG00000013605) #8	ENSAMEG00000013595	KCNB1 (ENSAMEG00000013588) #10	PTGIS (ENSAMEG00000013578) #11	B4GALT5 (ENSAMEG00000013544) #12	SLC9A8 (ENSAMEG00000013499) #13	ENSAMEG00000019824	SPATA2 (ENSAMEG00000013495) #14	RNF114 (ENSAMEG00000013483) #15	SNAI1 (ENSAMEG00000013478) #16	UBE2V1 (ENSAMEG00000030870) #17	PEDS1 (ENSAMEG00000013457) #18	PTPN1 (ENSAMEG00000013425) #20	RIPOR3 (ENSAMEG00000013385) #21	PARD6B (ENSAMEG00000023756) #22	BCAS4 (ENSAMEG00000023607)	ADNP (ENSAMEG00000013360) #23	DPM1 (ENSAMEG00000013335) #25	MOCS3 (ENSAMEG00000019820) #26	KCNG1 (ENSAMEG00000013332) #27	NFATC2 (ENSAMEG00000013329) #28	ATP9A (ENSAMEG00000013268) #29	SALL4 (ENSAMEG00000013250) #30	ZFP64 (ENSAMEG00000013237) #31	TSHZ2 (ENSAMEG00000013234) #32	ENSAMEG00000019927	ZNF217 (ENSAMEG00000013231) #33	BCAS1 (ENSAMEG00000013223) #34	CYP24A1 (ENSAMEG00000013169) #35	PFDN4 (ENSAMEG00000013164) #36
Giant Panda	MODERN SPECIES	2288	ENSAMEG00000027135	IL13RA1 (ENSAMEG00000002053)	ENSAMEG00000019781	LONRF3 (ENSAMEG00000002100)	ENSAMEG00000029352	ENSAMEG00000019790	PGRMC1 (ENSAMEG00000028229)	ENSAMEG00000029776	SLC25A43 (ENSAMEG00000030160)	ENSAMEG00000025296	UBE2A (ENSAMEG00000026890)	STEEP1 (ENSAMEG00000000145)	NKRF (ENSAMEG00000000152)	SEPTIN6 (ENSAMEG00000000156)	SOWAHD (ENSAMEG00000000161)	ENSAMEG00000000162 #22	ENSAMEG00000026154	UPF3B (ENSAMEG00000000163)	ENSAMEG00000019845	NDUFA1 (ENSAMEG00000000169)	ENSAMEG00000000172	NKAP (ENSAMEG00000000173)	ENSAMEG00000028340	ZBTB33 (ENSAMEG00000019851)	TMEM255A (ENSAMEG00000000183)	ATP1B4 (ENSAMEG00000000185)	ENSAMEG00000028733	LAMP2 (ENSAMEG00000000199)	CUL4B (ENSAMEG00000000210)	MCTS1 (ENSAMEG00000029271)	C1GALT1C1 (ENSAMEG00000019858)
Mustelinae	ANCESTRAL SPECIES	11	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31
Ferret	MODERN SPECIES	180	KCNB1 (ENSMPUG00000017569) #10	PTGIS (ENSMPUG00000017568) #11	B4GALT5 (ENSMPUG00000017567) #12	SLC9A8 (ENSMPUG00000017561) #13	ENSMPUG00000019022	SPATA2 (ENSMPUG00000017560) #14	RNF114 (ENSMPUG00000017559) #15	SNAI1 (ENSMPUG00000017558) #16	UBE2V1 (ENSMPUG00000017557) #17	ENSMPUG00000017556	CEBPB (ENSMPUG00000019019) #19	ENSMPUG00000017555	ENSMPUG00000017554	PTPN1 (ENSMPUG00000017553) #20	RIPOR3 (ENSMPUG00000017552) #21	PARD6B (ENSMPUG00000017551) #22	ENSMPUG00000017550	BCAS4 (ENSMPUG00000017549)	ADNP (ENSMPUG00000017548) #23	DPM1 (ENSMPUG00000017547) #25	MOCS3 (ENSMPUG00000019016) #26	KCNG1 (ENSMPUG00000017546) #27	NFATC2 (ENSMPUG00000017545) #28	ATP9A (ENSMPUG00000017544) #29	SALL4 (ENSMPUG00000017543) #30	ENSMPUG00000017542	ZFP64 (ENSMPUG00000017541) #31
American mink	MODERN SPECIES	7	DDX27 (ENSNVIG00000008022) #7	ZNFX1 (ENSNVIG00000007977) #8	ENSNVIG00000007903	KCNB1 (ENSNVIG00000007882) #10	PTGIS (ENSNVIG00000007847) #11	B4GALT5 (ENSNVIG00000007732) #12	SLC9A8 (ENSNVIG00000007586) #13	ENSNVIG00000007576	SPATA2 (ENSNVIG00000007563) #14	RNF114 (ENSNVIG00000007546) #15	SNAI1 (ENSNVIG00000007541) #16	ENSNVIG00000007439	PEDS1 (ENSNVIG00000007421) #18	PTPN1 (ENSNVIG00000007377) #20	RIPOR3 (ENSNVIG00000007317) #21	PARD6B (ENSNVIG00000007308) #22	BCAS4 (ENSNVIG00000007297)	ADNP (ENSNVIG00000007279) #23	DPM1 (ENSNVIG00000007238) #25	MOCS3 (ENSNVIG00000007233) #26	KCNG1 (ENSNVIG00000007215) #27	NFATC2 (ENSNVIG00000007153) #28	ATP9A (ENSNVIG00000006242) #29	SALL4 (ENSNVIG00000006205) #30	ZFP64 (ENSNVIG00000006129) #31
Canidae	ANCESTRAL SPECIES	41	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00910000148217	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Canis_lupus	ANCESTRAL SPECIES	13	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00910000148217	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Dog	MODERN SPECIES	16	ZNFX1 (ENSCAFG00845024687) #8	KCNB1 (ENSCAFG00845024922) #10	PTGIS (ENSCAFG00845025000) #11	B4GALT5 (ENSCAFG00845025327) #12	ENSCAFG00845025394	SLC9A8 (ENSCAFG00845025485) #13	IL29L (ENSCAFG00845025792)	SPATA2 (ENSCAFG00845025815) #14	RNF114 (ENSCAFG00845025848) #15	SNAI1 (ENSCAFG00845025916) #16	UBE2V1 (ENSCAFG00845025977) #17	PEDS1 (ENSCAFG00845026138) #18	CEBPB (ENSCAFG00845026193) #19	PTPN1 (ENSCAFG00845026218) #20	RIPOR3 (ENSCAFG00845026334) #21	PARD6B (ENSCAFG00845026631) #22	ENSCAFG00845026672	ADNP (ENSCAFG00845026717) #23	ENSCAFG00845026743	DPM1 (ENSCAFG00845026765) #25	MOCS3 (ENSCAFG00845026807) #26	ENSCAFG00845026830	KCNG1 (ENSCAFG00845026863) #27	NFATC2 (ENSCAFG00845026966) #28	ATP9A (ENSCAFG00845027235) #29	SALL4 (ENSCAFG00845027669) #30	ZFP64 (ENSCAFG00845027811) #31	TSHZ2 (ENSCAFG00845027975) #32	ENSCAFG00845028117	ZNF217 (ENSCAFG00845028152) #33	BCAS1 (ENSCAFG00845028476) #34
Dingo	MODERN SPECIES	343	DDX27 (ENSCAFG00020017143) #7	ZNFX1 (ENSCAFG00020017272) #8	KCNB1 (ENSCAFG00020017422) #10	PTGIS (ENSCAFG00020017431) #11	B4GALT5 (ENSCAFG00020017452) #12	SLC9A8 (ENSCAFG00020017467) #13	ENSCAFG00020017473	SPATA2 (ENSCAFG00020017474) #14	RNF114 (ENSCAFG00020017476) #15	SNAI1 (ENSCAFG00020017479) #16	ENSCAFG00020017482	PEDS1 (ENSCAFG00020017489) #18	CEBPB (ENSCAFG00020017492) #19	PTPN1 (ENSCAFG00020017498) #20	RIPOR3 (ENSCAFG00020017501) #21	PARD6B (ENSCAFG00020017523) #22	BCAS4 (ENSCAFG00020017528)	ADNP (ENSCAFG00020017529) #23	DPM1 (ENSCAFG00020017532) #25	MOCS3 (ENSCAFG00020017535) #26	KCNG1 (ENSCAFG00020017537) #27	NFATC2 (ENSCAFG00020017548) #28	ATP9A (ENSCAFG00020017722) #29	SALL4 (ENSCAFG00020021870) #30	ZFP64 (ENSCAFG00020021877) #31	ENSCAFG00020021880	TSHZ2 (ENSCAFG00020021890) #32	ENSCAFG00020021892	ZNF217 (ENSCAFG00020021894) #33	BCAS1 (ENSCAFG00020021900) #34	CYP24A1 (ENSCAFG00020021905) #35
Red fox	MODERN SPECIES	104	STAU1 (ENSVVUG00000022325)	DDX27 (ENSVVUG00000022331) #7	ZNFX1 (ENSVVUG00000022344) #8	KCNB1 (ENSVVUG00000022376) #10	PTGIS (ENSVVUG00000022381) #11	B4GALT5 (ENSVVUG00000022393) #12	ENSVVUG00000022396 #13	ENSVVUG00000022401	SPATA2 (ENSVVUG00000022404) #14	RNF114 (ENSVVUG00000022407) #15	SNAI1 (ENSVVUG00000022410) #16	ENSVVUG00000022417	TMEM189 (ENSVVUG00000022420) #18	PTPN1 (ENSVVUG00000022432) #20	RIPOR3 (ENSVVUG00000022436) #21	PARD6B (ENSVVUG00000022445) #22	BCAS4 (ENSVVUG00000022450)	ADNP (ENSVVUG00000022456) #23	DPM1 (ENSVVUG00000022458) #25	MOCS3 (ENSVVUG00000022461) #26	KCNG1 (ENSVVUG00000022465) #27	NFATC2 (ENSVVUG00000022491) #28	ATP9A (ENSVVUG00000022659) #29	ENSVVUG00000022697	ZFP64 (ENSVVUG00000022699) #31	TSHZ2 (ENSVVUG00000022715) #32	ENSVVUG00000022718	ZNF217 (ENSVVUG00000022722) #33	BCAS1 (ENSVVUG00000022730) #34	CYP24A1 (ENSVVUG00000022737) #35	PFDN4 (ENSVVUG00000022740) #36
Felidae	ANCESTRAL SPECIES	3	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000154276.kb	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Cat	MODERN SPECIES	2	ZNFX1 (ENSFCAG00000001449) #8	ENSFCAG00000048325	KCNB1 (ENSFCAG00000009513) #10	PTGIS (ENSFCAG00000030511) #11	B4GALT5 (ENSFCAG00000009515) #12	SLC9A8 (ENSFCAG00000027032) #13	IL-29 (ENSFCAG00000026203)	SPATA2 (ENSFCAG00000029054) #14	RNF114 (ENSFCAG00000028409) #15	SNAI1 (ENSFCAG00000010558) #16	ENSFCAG00000007602	PEDS1 (ENSFCAG00000026629) #18	CEBPB (ENSFCAG00000041071) #19	PTPN1 (ENSFCAG00000003944) #20	RIPOR3 (ENSFCAG00000003947) #21	PARD6B (ENSFCAG00000042038) #22	BCAS4 (ENSFCAG00000009980)	ADNP (ENSFCAG00000025702) #23	DPM1 (ENSFCAG00000042178) #25	MOCS3 (ENSFCAG00000009792) #26	KCNG1 (ENSFCAG00000009793) #27	NFATC2 (ENSFCAG00000000947) #28	ATP9A (ENSFCAG00000022069) #29	ENSFCAG00000032676	SALL4 (ENSFCAG00000002822) #30	ZFP64 (ENSFCAG00000011815) #31	TSHZ2 (ENSFCAG00000014616) #32	ZNF217 (ENSFCAG00000029845) #33	BCAS1 (ENSFCAG00000002451) #34	CYP24A1 (ENSFCAG00000002452) #35	PFDN4 (ENSFCAG00000013355) #36
Panthera	ANCESTRAL SPECIES	2	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000154276.kb	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00910000146955	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000154276.kb	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
leopard	MODERN SPECIES	32	ZNFX1 (ENSPPRG00000008291) #8	KCNB1 (ENSPPRG00000008757) #10	PTGIS (ENSPPRG00000009242) #11	B4GALT5 (ENSPPRG00000009529) #12	SLC9A8 (ENSPPRG00000012137) #13	ENSPPRG00000016222	SPATA2 (ENSPPRG00000012563) #14	RNF114 (ENSPPRG00000013120) #15	SNAI1 (ENSPPRG00000013272) #16	ENSPPRG00000016083	PEDS1 (ENSPPRG00000021919) #18	ENSPPRG00000016619 #19	ENSPPRG00000016636 #19	PTPN1 (ENSPPRG00000000695) #20	RIPOR3 (ENSPPRG00000002233) #21	PARD6B (ENSPPRG00000002536) #22	BCAS4 (ENSPPRG00000003058)	ADNP (ENSPPRG00000003461) #23	DPM1 (ENSPPRG00000003732) #25	MOCS3 (ENSPPRG00000016957) #26	KCNG1 (ENSPPRG00000004104) #27	NFATC2 (ENSPPRG00000005267) #28	ENSPPRG00000017056	ATP9A (ENSPPRG00000008193) #29	SALL4 (ENSPPRG00000008677) #30	ENSPPRG00000009749	ENSPPRG00000010090 #31	ZFP64 (ENSPPRG00000012539) #31	TSHZ2 (ENSPPRG00000013365) #32	ZNF217 (ENSPPRG00000014025) #33	BCAS1 (ENSPPRG00000015142) #34
lion	MODERN SPECIES	3	DDX27 (ENSPLOG00000002207) #7	ZNFX1 (ENSPLOG00000002240) #8	KCNB1 (ENSPLOG00000002286) #10	PTGIS (ENSPLOG00000002303) #11	B4GALT5 (ENSPLOG00000002410) #12	SLC9A8 (ENSPLOG00000002589) #13	ENSPLOG00000002760	SPATA2 (ENSPLOG00000002775) #14	RNF114 (ENSPLOG00000002806) #15	SNAI1 (ENSPLOG00000002824) #16	ENSPLOG00000002891	PEDS1 (ENSPLOG00000002963) #18	CEBPB (ENSPLOG00000002998) #19	PTPN1 (ENSPLOG00000003015) #20	RIPOR3 (ENSPLOG00000003036) #21	PARD6B (ENSPLOG00000003051) #22	ENSPLOG00000003071	ADNP (ENSPLOG00000003098) #23	DPM1 (ENSPLOG00000003116) #25	MOCS3 (ENSPLOG00000003140) #26	KCNG1 (ENSPLOG00000003153) #27	NFATC2 (ENSPLOG00000003200) #28	ATP9A (ENSPLOG00000003344) #29	SALL4 (ENSPLOG00000003409) #30	ENSPLOG00000003422	ENSPLOG00000003430 #31	ZFP64 (ENSPLOG00000003449) #31	TSHZ2 (ENSPLOG00000003471) #32	ZNF217 (ENSPLOG00000003494) #33	BCAS1 (ENSPLOG00000003532) #34	ENSPLOG00000003567 #36
Tiger	MODERN SPECIES	108	CSE1L (ENSPTIG00000011919)	STAU1 (ENSPTIG00000011768)	DDX27 (ENSPTIG00000011662) #7	ZNFX1 (ENSPTIG00000011606) #8	KCNB1 (ENSPTIG00000011592) #10	PTGIS (ENSPTIG00000011580) #11	B4GALT5 (ENSPTIG00000011570) #12	SLC9A8 (ENSPTIG00000011538) #13	ENSPTIG00000009242	ENSPTIG00000011521 #14	RNF114 (ENSPTIG00000011513) #15	ENSPTIG00000011480	PEDS1 (ENSPTIG00000011419) #18	PTPN1 (ENSPTIG00000011378) #20	RIPOR3 (ENSPTIG00000011313) #21	PARD6B (ENSPTIG00000011298) #22	BCAS4 (ENSPTIG00000011291)	ADNP (ENSPTIG00000011242) #23	DPM1 (ENSPTIG00000011232) #25	KCNG1 (ENSPTIG00000011218) #27	ZMYND8 (ENSPTIG00000010111)	EYA2 (ENSPTIG00000009852)	SLC2A10 (ENSPTIG00000009819)	TP53RK (ENSPTIG00000009801)	SLC13A3 (ENSPTIG00000009679)	OCSTAMP (ENSPTIG00000009634)	ENSPTIG00000009625	ELMO2 (ENSPTIG00000009479)	SLC35C2 (ENSPTIG00000009363)
Artiodactyla	ANCESTRAL SPECIES	18	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00910000148217	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Suina	ANCESTRAL SPECIES	9	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00910000148217	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Chacoan peccary	MODERN SPECIES	801	ENSCWAG00000005812	KCNB1 (ENSCWAG00000005796) #10	ENSCWAG00000005781	PTGIS (ENSCWAG00000005754) #11	B4GALT5 (ENSCWAG00000005722) #12	SLC9A8 (ENSCWAG00000005649) #13	IFNL1 (ENSCWAG00000005638)	SPATA2 (ENSCWAG00000005620) #14	RNF114 (ENSCWAG00000005606) #15	SNAI1 (ENSCWAG00000005582) #16	UBE2V1 (ENSCWAG00000005538) #17	PEDS1 (ENSCWAG00000005495) #18	CEBPB (ENSCWAG00000005488) #19	PTPN1 (ENSCWAG00000005450) #20	RIPOR3 (ENSCWAG00000005298) #21	PARD6B (ENSCWAG00000005258) #22	BCAS4 (ENSCWAG00000005219)	ADNP (ENSCWAG00000005189) #23	DPM1 (ENSCWAG00000005161) #25	MOCS3 (ENSCWAG00000005146) #26	KCNG1 (ENSCWAG00000005124) #27	NFATC2 (ENSCWAG00000004900) #28	ATP9A (ENSCWAG00000004811) #29	SALL4 (ENSCWAG00000004750) #30	ENSCWAG00000004698	ENSCWAG00000004683	ZFP64 (ENSCWAG00000004512) #31	TSHZ2 (ENSCWAG00000004473) #32	ENSCWAG00000004441	ZNF217 (ENSCWAG00000004422) #33	BCAS1 (ENSCWAG00000004272) #34
Pig	MODERN SPECIES	8	KCNB1 (ENSSSCG00000007462) #10	PTGIS (ENSSSCG00000007463) #11	ENSSSCG00000035460	ENSSSCG00000007464	B4GALT5 (ENSSSCG00000007465) #12	SLC9A8 (ENSSSCG00000007466) #13	IL29 (ENSSSCG00000036439)	SPATA2 (ENSSSCG00000033324) #14	RNF114 (ENSSSCG00000036129) #15	SNAI1 (ENSSSCG00000032613) #16	UBE2V1 (ENSSSCG00000030632)	PEDS1 (ENSSSCG00000027287) #18	CEBPB (ENSSSCG00000034207) #19	PTPN1 (ENSSSCG00000007469) #20	RIPOR3 (ENSSSCG00000007470) #21	PARD6B (ENSSSCG00000027206) #22	BCAS4 (ENSSSCG00000007472)	ADNP (ENSSSCG00000007473) #23	ENSSSCG00000044129	DPM1 (ENSSSCG00000034952) #25	MOCS3 (ENSSSCG00000007475) #26	KCNG1 (ENSSSCG00000007476) #27	ENSSSCG00000051388	ENSSSCG00000044650	NFATC2 (ENSSSCG00000007477) #28	ATP9A (ENSSSCG00000007478) #29	SALL4 (ENSSSCG00000053517) #30	ENSSSCG00000007481 #31	ZFP64 (ENSSSCG00000058830) #31	ENSSSCG00000062653	ZNF217 (ENSSSCG00000007484) #33
Artiodactyla_a	ANCESTRAL SPECIES	16	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000158854 #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00910000148217	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Camelidae	ANCESTRAL SPECIES	10	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Arabian camel	MODERN SPECIES	10	ZNFX1 (ENSCDRG00005013760) #8	ENSCDRG00005013886	KCNB1 (ENSCDRG00005013964) #10	PTGIS (ENSCDRG00005013978) #11	B4GALT5 (ENSCDRG00005014035) #12	SLC9A8 (ENSCDRG00005014140) #13	ENSCDRG00005014492	SPATA2 (ENSCDRG00005014516) #14	RNF114 (ENSCDRG00005014557) #15	SNAI1 (ENSCDRG00005014607) #16	UBE2V1 (ENSCDRG00005014645) #17	PEDS1 (ENSCDRG00005014730) #18	CEBPB (ENSCDRG00005014799) #19	PTPN1 (ENSCDRG00005014827) #20	RIPOR3 (ENSCDRG00005014953) #21	PARD6B (ENSCDRG00005015447) #22	BCAS4 (ENSCDRG00005015482)	ADNP (ENSCDRG00005015515) #23	DPM1 (ENSCDRG00005015547) #25	MOCS3 (ENSCDRG00005015622) #26	ENSCDRG00005015632	KCNG1 (ENSCDRG00005015648) #27	NFATC2 (ENSCDRG00005015695) #28	ATP9A (ENSCDRG00005015920) #29	SALL4 (ENSCDRG00005016240) #30	ZFP64 (ENSCDRG00005016359) #31	ENSCDRG00005016576	TSHZ2 (ENSCDRG00005016617) #32	ENSCDRG00005016633	ZNF217 (ENSCDRG00005016648) #33	BCAS1 (ENSCDRG00005016699) #34
Alpaca	MODERN SPECIES	182																PARD6B (ENSVPAG00000003963) #22
Artiodactyla_b	ANCESTRAL SPECIES	17	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00910000148217	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Cetacea	ANCESTRAL SPECIES	3	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00940000153664.A.a.m.b.b	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a.g #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00940000153664.A.a.m.b.b	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847.l #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a.g #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00940000153664.A.a.m.b.b	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Dolphin	MODERN SPECIES	2536														PTPN1 (ENSTTRG00000014277) #20	RIPOR3 (ENSTTRG00000014279) #21	PARD6B (ENSTTRG00000014281) #22
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847.l #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a.g #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00940000153664.A.a.m.b.b	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Vaquita	DUPLICATION
Vaquita	MODERN SPECIES	10	POP4 (ENSPSNG00000020993)	PLEKHF1 (ENSPSNG00000020975)	C19orf12 (ENSPSNG00000020941)	CCNE1 (ENSPSNG00000020886)	URI1 (ENSPSNG00000020804)	ZNF536 (ENSPSNG00000020763)	TSHZ3 (ENSPSNG00000020733) ##32	ZNF507 (ENSPSNG00000020685)	DPY19L3 (ENSPSNG00000020640)	ENSPSNG00000020582	ANKRD27 (ENSPSNG00000020465)	RGS9BP (ENSPSNG00000020384)	NUDT19 (ENSPSNG00000020373)	TDRD12 (ENSPSNG00000020182)	SLC7A9 (ENSPSNG00000020070)	ENSPSNG00000020046 #22	CEP89 (ENSPSNG00000019994)	FAAP24 (ENSPSNG00000019954)	RHPN2 (ENSPSNG00000019928)	GPATCH1 (ENSPSNG00000019894)	WDR88 (ENSPSNG00000019754)	LRP3 (ENSPSNG00000019712)	SLC7A10 (ENSPSNG00000019639)	CEBPA (ENSPSNG00000019621)	CEBPG (ENSPSNG00000019601)	PEPD (ENSPSNG00000019536)	CHST8 (ENSPSNG00000019495)	KCTD15 (ENSPSNG00000019455)	LSM14A (ENSPSNG00000019322)	GARRE1 (ENSPSNG00000019202)	GPI (ENSPSNG00000018917)
Vaquita	MODERN SPECIES	6	DDX27 (ENSPSNG00000021788) #7	ZNFX1 (ENSPSNG00000021759) #8	ENSPSNG00000021663	KCNB1 (ENSPSNG00000021638) #10	PTGIS (ENSPSNG00000021556) #11	B4GALT5 (ENSPSNG00000021518) #12	SLC9A8 (ENSPSNG00000021429) #13	SPATA2 (ENSPSNG00000021368) #14	RNF114 (ENSPSNG00000021340) #15	SNAI1 (ENSPSNG00000021307) #16	ENSPSNG00000021242	PEDS1 (ENSPSNG00000021182) #18	CEBPB (ENSPSNG00000021163) #19	PTPN1 (ENSPSNG00000021125) #20	RIPOR3 (ENSPSNG00000020934) #21	ENSPSNG00000020880 #22	BCAS4 (ENSPSNG00000020852)	ADNP (ENSPSNG00000020812) #23	DPM1 (ENSPSNG00000020744) #25	ENSPSNG00000020711 #26	KCNG1 (ENSPSNG00000020680) #27	NFATC2 (ENSPSNG00000020496) #28	ATP9A (ENSPSNG00000020387) #29	SALL4 (ENSPSNG00000020296) #30	ZFP64 (ENSPSNG00000020170) #31	TSHZ2 (ENSPSNG00000020114) #32	ENSPSNG00000020106	ZNF217 (ENSPSNG00000020078) #33	ENSPSNG00000020059	BCAS1 (ENSPSNG00000019991) #34	CYP24A1 (ENSPSNG00000019798) #35
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00390000014310.g.c.b	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847.l #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a.g #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00940000153664.A.a.m.b.b	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Narwhal	DUPLICATION
Narwhal	MODERN SPECIES	296	C19orf12 (ENSMMNG00015001260)	CCNE1 (ENSMMNG00015001304)	URI1 (ENSMMNG00015001385)	ZNF536 (ENSMMNG00015001436)	TSHZ3 (ENSMMNG00015001458) ##32	ZNF507 (ENSMMNG00015001504)	DPY19L3 (ENSMMNG00015001544)	PDCD5 (ENSMMNG00015001602)	ANKRD27 (ENSMMNG00015001650)	RGS9BP (ENSMMNG00015001697)	NUDT19 (ENSMMNG00015001712)	TDRD12 (ENSMMNG00015001768)	SLC7A9 (ENSMMNG00015001863)	ENSMMNG00015001894	CEP89 (ENSMMNG00015001947)	ENSMMNG00015002056 #22	FAAP24 (ENSMMNG00015002077)	RHPN2 (ENSMMNG00015002110)	GPATCH1 (ENSMMNG00015002182)	WDR88 (ENSMMNG00015002263)	LRP3 (ENSMMNG00015002346)	SLC7A10 (ENSMMNG00015002412)	CEBPA (ENSMMNG00015002491)	CEBPG (ENSMMNG00015002501)	PEPD (ENSMMNG00015002556)	CHST8 (ENSMMNG00015002618)	KCTD15 (ENSMMNG00015002648)	LSM14A (ENSMMNG00015002709)	GARRE1 (ENSMMNG00015002783)	GPI (ENSMMNG00015002821)	PDCD2L (ENSMMNG00015002881)
Narwhal	MODERN SPECIES	299	ZNFX1 (ENSMMNG00015001649) #8	ENSMMNG00015001590	KCNB1 (ENSMMNG00015001568) #10	PTGIS (ENSMMNG00015001553) #11	B4GALT5 (ENSMMNG00015001535) #12	SLC9A8 (ENSMMNG00015001475) #13	ENSMMNG00015001439	ENSMMNG00015001424 #14	RNF114 (ENSMMNG00015001397) #15	SNAI1 (ENSMMNG00015001375) #16	ENSMMNG00015001308	PEDS1 (ENSMMNG00015001247) #18	CEBPB (ENSMMNG00015001228) #19	PTPN1 (ENSMMNG00015001207) #20	RIPOR3 (ENSMMNG00015001135) #21	ENSMMNG00015001097 #22	ENSMMNG00015001084	BCAS4 (ENSMMNG00015001066)	ADNP (ENSMMNG00015001049) #23	DPM1 (ENSMMNG00015001027) #25	MOCS3 (ENSMMNG00015001013) #26	KCNG1 (ENSMMNG00015000992) #27	ENSMMNG00015000978	NFATC2 (ENSMMNG00015000875) #28	ATP9A (ENSMMNG00015000677) #29	ENSMMNG00015000612 #30	ZFP64 (ENSMMNG00015000539) #31	TSHZ2 (ENSMMNG00015000487) #32	ENSMMNG00015000468	ZNF217 (ENSMMNG00015000437) #33	ENSMMNG00015000402
Beluga whale	DUPLICATION
Beluga whale	MODERN SPECIES	14	POP4 (ENSDLEG00000001765)	CUNH19orf12 (ENSDLEG00000001761)	CCNE1 (ENSDLEG00000001752)	URI1 (ENSDLEG00000001739)	ZNF536 (ENSDLEG00000001724)	TSHZ3 (ENSDLEG00000001711) ##32	ZNF507 (ENSDLEG00000001695)	DPY19L3 (ENSDLEG00000001647)	ENSDLEG00000001621	ANKRD27 (ENSDLEG00000001495)	RGS9BP (ENSDLEG00000001457)	NUDT19 (ENSDLEG00000001447)	TDRD12 (ENSDLEG00000001176)	ENSDLEG00000001110	SLC7A9 (ENSDLEG00000001083)	ENSDLEG00000001076 #22	CEP89 (ENSDLEG00000001045)	FAAP24 (ENSDLEG00000001028)	RHPN2 (ENSDLEG00000000997)	GPATCH1 (ENSDLEG00000000964)	ENSDLEG00000000950	LRP3 (ENSDLEG00000000916)	SLC7A10 (ENSDLEG00000000869)	CEBPA (ENSDLEG00000000849)	CEBPG (ENSDLEG00000000840)	PEPD (ENSDLEG00000000825)	CHST8 (ENSDLEG00000000815)	KCTD15 (ENSDLEG00000000790)	LSM14A (ENSDLEG00000000703)	KIAA0355 (ENSDLEG00000000627)	GPI (ENSDLEG00000000552)
Beluga whale	MODERN SPECIES	36	ZNFX1 (ENSDLEG00000002399) #8	ENSDLEG00000002350	KCNB1 (ENSDLEG00000002346) #10	PTGIS (ENSDLEG00000002340) #11	B4GALT5 (ENSDLEG00000002327) #12	ENSDLEG00000002315 #13	ENSDLEG00000002307	SPATA2 (ENSDLEG00000002299) #14	RNF114 (ENSDLEG00000002288) #15	SNAI1 (ENSDLEG00000002278) #16	ENSDLEG00000002266 #17	PEDS1 (ENSDLEG00000002253) #18	CEBPB (ENSDLEG00000002250) #19	PTPN1 (ENSDLEG00000002239) #20	RIPOR3 (ENSDLEG00000002219) #21	PARD6B (ENSDLEG00000002207) #22	ENSDLEG00000002201	BCAS4 (ENSDLEG00000002183)	ADNP (ENSDLEG00000002171) #23	DPM1 (ENSDLEG00000002158) #25	MOCS3 (ENSDLEG00000002146) #26	KCNG1 (ENSDLEG00000002141) #27	NFATC2 (ENSDLEG00000002111) #28	ATP9A (ENSDLEG00000002017) #29	SALL4 (ENSDLEG00000001990) #30	ZFP64 (ENSDLEG00000001976) #31	TSHZ2 (ENSDLEG00000001964) #32	ENSDLEG00000001949	ZNF217 (ENSDLEG00000001937) #33	ENSDLEG00000001927	BCAS1 (ENSDLEG00000001828) #34
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	13	UTP14A (ENSPCTG00005013941)	ZDHHC9 (ENSPCTG00005013890)	SASH3 (ENSPCTG00005013747)	XPNPEP2 (ENSPCTG00005013671)	APLN (ENSPCTG00005013614)	OCRL (ENSPCTG00005013437)	SMARCA1 (ENSPCTG00005013285)	PRR32 (ENSPCTG00005013220)	DCAF12L1 (ENSPCTG00005013200)	DCAF12L2 (ENSPCTG00005013175)	ENSPCTG00005013125	TENM1 (ENSPCTG00005012483)	SH2D1A (ENSPCTG00005012370)	ENSPCTG00005012335	STAG2 (ENSPCTG00005021957)	ENSPCTG00005021944 #22	XIAP (ENSPCTG00005021934)	THOC2 (ENSPCTG00005021828)	GRIA3 (ENSPCTG00005021790)	ENSPCTG00005021769	ENSPCTG00005021761	C1GALT1C1 (ENSPCTG00005021756)	MCTS1 (ENSPCTG00005021726)	ENSPCTG00005021706	CUL4B (ENSPCTG00005021625)	LAMP2 (ENSPCTG00005021587)	ATP1B4 (ENSPCTG00005021520)	TMEM255A (ENSPCTG00005021498)	ENSPCTG00005021487	ENSPCTG00005021481	ENSPCTG00005021469
Sperm whale	MODERN SPECIES	5	ENSPCTG00005006467	PREX1 (ENSPCTG00005006159)	ARFGEF2 (ENSPCTG00005006020)	CSE1L (ENSPCTG00005005925)	STAU1 (ENSPCTG00005005886)	DDX27 (ENSPCTG00005005813) #7	ZNFX1 (ENSPCTG00005005765) #8	ENSPCTG00005005714	KCNB1 (ENSPCTG00005005694) #10	PTGIS (ENSPCTG00005005665) #11	SLC9A8 (ENSPCTG00005005474) #13	B4GALT5 (ENSPCTG00005005401) #12	TMEM189 (ENSPCTG00005005331) #18	PTPN1 (ENSPCTG00005005281) #20	RIPOR3 (ENSPCTG00005005154) #21	PARD6B (ENSPCTG00005005115) #22	BCAS4 (ENSPCTG00005005092)	ADNP (ENSPCTG00005005045) #23	DPM1 (ENSPCTG00005005006) #25	MOCS3 (ENSPCTG00005004988) #26	KCNG1 (ENSPCTG00005004977) #27	NFATC2 (ENSPCTG00005004813) #28	ATP9A (ENSPCTG00005004382) #29	ENSPCTG00005004261 #30	ZFP64 (ENSPCTG00005021080) #31	TSHZ2 (ENSPCTG00005021047) #32	ENSPCTG00005021022	ZNF217 (ENSPCTG00005021008) #33	ENSPCTG00005020985	ENSPCTG00005020977	BCAS1 (ENSPCTG00005020687) #34
Blue whale	DUPLICATION
Blue whale	DUPLICATION
Blue whale	MODERN SPECIES	19	ENSBMSG00010007814	ENSBMSG00010007801	OVCH2 (ENSBMSG00010007765)	CYB5R2 (ENSBMSG00010007742)	PPFIBP2 (ENSBMSG00010007616)	OLFML1 (ENSBMSG00010007560)	ENSBMSG00010007548	SYT9 (ENSBMSG00010007506)	ENSBMSG00010021954	ZNF214 (ENSBMSG00010021949)	ZNF215 (ENSBMSG00010021946)	OR2D3 (ENSBMSG00010021942)	ENSBMSG00010021937	OR6A2 (ENSBMSG00010021935)	ENSBMSG00010021931	ENSBMSG00010021930 #22	MRPL17 (ENSBMSG00010021925)	TPP1 (ENSBMSG00010021892)	TAF10 (ENSBMSG00010021888)	ILK (ENSBMSG00010021882)	RRP8 (ENSBMSG00010021876)	ENSBMSG00010021870	ENSBMSG00010021866	TIMM10B (ENSBMSG00010021864)	ARFIP2 (ENSBMSG00010021854)	TRIM3 (ENSBMSG00010021846)	HPX (ENSBMSG00010021835)	APBB1 (ENSBMSG00010021805)	SMPD1 (ENSBMSG00010021791)	CAVIN3 (ENSBMSG00010021788)	CCKBR (ENSBMSG00010021785)
Blue whale	MODERN SPECIES	40	ENSBMSG00010018357	ZDHHC9 (ENSBMSG00010018334)	SASH3 (ENSBMSG00010018297)	XPNPEP2 (ENSBMSG00010018165)	APLN (ENSBMSG00010018128)	OCRL (ENSBMSG00010018094)	SMARCA1 (ENSBMSG00010018032)	PRR32 (ENSBMSG00010017971)	DCAF12L1 (ENSBMSG00010017963)	DCAF12L2 (ENSBMSG00010017949)	TENM1 (ENSBMSG00010017660)	SH2D1A (ENSBMSG00010017571)	ENSBMSG00010017551	STAG2 (ENSBMSG00010017507)	ENSBMSG00010017479	ENSBMSG00010017462 #22	XIAP (ENSBMSG00010017439)	THOC2 (ENSBMSG00010017313)	GRIA3 (ENSBMSG00010017249)	ENSBMSG00010017208	ENSBMSG00010017184	C1GALT1C1 (ENSBMSG00010017176)	MCTS1 (ENSBMSG00010017130)	ENSBMSG00010017101	CUL4B (ENSBMSG00010017007)	LAMP2 (ENSBMSG00010016949)	ATP1B4 (ENSBMSG00010016771)	TMEM255A (ENSBMSG00010021570)	ZBTB33 (ENSBMSG00010021554)	NKAP (ENSBMSG00010021536)	ENSBMSG00010021529
Blue whale	MODERN SPECIES	6	DDX27 (ENSBMSG00010019301) #7	ZNFX1 (ENSBMSG00010019278) #8	ENSBMSG00010019243	KCNB1 (ENSBMSG00010019223) #10	PTGIS (ENSBMSG00010019205) #11	B4GALT5 (ENSBMSG00010019171) #12	SLC9A8 (ENSBMSG00010019047) #13	SPATA2 (ENSBMSG00010018991) #14	RNF114 (ENSBMSG00010018966) #15	SNAI1 (ENSBMSG00010018944) #16	ENSBMSG00010018752	PEDS1 (ENSBMSG00010018683) #18	CEBPB (ENSBMSG00010018668) #19	PTPN1 (ENSBMSG00010018637) #20	RIPOR3 (ENSBMSG00010018504) #21	ENSBMSG00010018471 #22	ENSBMSG00010018443	ADNP (ENSBMSG00010018402) #23	DPM1 (ENSBMSG00010018385) #25	ENSBMSG00010018371 #26	KCNG1 (ENSBMSG00010018351) #27	NFATC2 (ENSBMSG00010018152) #28	ATP9A (ENSBMSG00010018064) #29	SALL4 (ENSBMSG00010017978) #30	ENSBMSG00010017945	ZFP64 (ENSBMSG00010017865) #31	PNMA5 (ENSBMSG00010017834)	ENSBMSG00010017820	TSHZ2 (ENSBMSG00010017799) #32	ENSBMSG00010017767	ZNF217 (ENSBMSG00010017748) #33
Pecora	ANCESTRAL SPECIES	9	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00910000148217	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35
Yarkand deer	MODERN SPECIES	15	CSE1L (ENSCHYG00000025610)	STAU1 (ENSCHYG00000025698)	DDX27 (ENSCHYG00000025747) #7	ZNFX1 (ENSCHYG00000025872) #8	KCNB1 (ENSCHYG00000025941) #10	PTGIS (ENSCHYG00000025958) #11	B4GALT5 (ENSCHYG00000025991) #12	SLC9A8 (ENSCHYG00000026025) #13	SPATA2 (ENSCHYG00000026150) #14	ENSCHYG00000009682 #15	SNAI1 (ENSCHYG00000009715) #16	ENSCHYG00000009784	ENSCHYG00000009981	PTPN1 (ENSCHYG00000010096) #20	RIPOR3 (ENSCHYG00000010277) #21	PARD6B (ENSCHYG00000010449) #22	BCAS4 (ENSCHYG00000010495)	ENSCHYG00000010533	ADNP (ENSCHYG00000010570) #23	DPM1 (ENSCHYG00000010621) #25	MOCS3 (ENSCHYG00000010694) #26	KCNG1 (ENSCHYG00000010717) #27	NFATC2 (ENSCHYG00000010759) #28	ATP9A (ENSCHYG00000011270) #29	SALL4 (ENSCHYG00000012194) #30	ENSCHYG00000012287	ZFP64 (ENSCHYG00000012335) #31	TSHZ2 (ENSCHYG00000012687) #32	ZNF217 (ENSCHYG00000012731) #33	BCAS1 (ENSCHYG00000012786) #34	CYP24A1 (ENSCHYG00000013105) #35
Percora_a	ANCESTRAL SPECIES	10	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Siberian musk deer	MODERN SPECIES	156	ENSMMSG00000000842	PTGIS (ENSMMSG00000000818) #11	ENSMMSG00000000799	B4GALT5 (ENSMMSG00000000771) #12	SLC9A8 (ENSMMSG00000000731) #13	SPATA2 (ENSMMSG00000000719) #14	RNF114 (ENSMMSG00000000644) #15	SNAI1 (ENSMMSG00000000625) #16	ENSMMSG00000000577	ENSMMSG00000000519	ENSMMSG00000000499	CEBPB (ENSMMSG00000000488) #19	ENSMMSG00000000476	PTPN1 (ENSMMSG00000000433) #20	RIPOR3 (ENSMMSG00000000362) #21	PARD6B (ENSMMSG00000000327) #22	BCAS4 (ENSMMSG00000000296)	ADNP (ENSMMSG00000000269) #23	DPM1 (ENSMMSG00000000236) #25	ENSMMSG00000000184 #26	KCNG1 (ENSMMSG00000015644) #27	NFATC2 (ENSMMSG00000015490) #28	ATP9A (ENSMMSG00000015245) #29	SALL4 (ENSMMSG00000015115) #30	ZFP64 (ENSMMSG00000014981) #31	ENSMMSG00000014970	TSHZ2 (ENSMMSG00000014943) #32	ENSMMSG00000014933	ZNF217 (ENSMMSG00000014894) #33	ENSMMSG00000014879	BCAS1 (ENSMMSG00000014841) #34
Bovidae	ANCESTRAL SPECIES	10	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Caprinae	ANCESTRAL SPECIES	21	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Goat	MODERN SPECIES	4	ZNFX1 (ENSCHIG00000018393) #8	KCNB1 (ENSCHIG00000025849) #10	PTGIS (ENSCHIG00000011304) #11	ENSCHIG00000023099	B4GALT5 (ENSCHIG00000017253) #12	SLC9A8 (ENSCHIG00000019556) #13	ENSCHIG00000016542	SPATA2 (ENSCHIG00000017318) #14	RNF114 (ENSCHIG00000011500) #15	SNAI1 (ENSCHIG00000014308) #16	ENSCHIG00000026963	ENSCHIG00000025237	CEBPB (ENSCHIG00000026165) #19	PTPN1 (ENSCHIG00000018438) #20	RIPOR3 (ENSCHIG00000021955) #21	PARD6B (ENSCHIG00000024844) #22	BCAS4 (ENSCHIG00000019980)	ADNP (ENSCHIG00000026866) #23	DPM1 (ENSCHIG00000024448) #25	MOCS3 (ENSCHIG00000002985) #26	KCNG1 (ENSCHIG00000023574) #27	NFATC2 (ENSCHIG00000013486) #28	ATP9A (ENSCHIG00000017687) #29	SALL4 (ENSCHIG00000026270) #30	ZFP64 (ENSCHIG00000013734) #31	TSHZ2 (ENSCHIG00000012906) #32	ENSCHIG00000002437	ZNF217 (ENSCHIG00000015816) #33	BCAS1 (ENSCHIG00000014229) #34	CYP24A1 (ENSCHIG00000009239) #35	ENSCHIG00000019520 #36
Rambouillet Sheep	MODERN SPECIES	4	CSE1L (ENSOARG00020023584)	STAU1 (ENSOARG00020023667)	DDX27 (ENSOARG00020023789) #7	ZNFX1 (ENSOARG00020023841) #8	KCNB1 (ENSOARG00020010013) #10	PTGIS (ENSOARG00020010083) #11	B4GALT5 (ENSOARG00020010276) #12	SLC9A8 (ENSOARG00020010491) #13	SPATA2 (ENSOARG00020010771) #14	RNF114 (ENSOARG00020010828) #15	SNAI1 (ENSOARG00020010897) #16	UBE2V1 (ENSOARG00020010955) #17	ENSOARG00020011139	CEBPB (ENSOARG00020011295) #19	PTPN1 (ENSOARG00020011319) #20	PARD6B (ENSOARG00020011957) #22	BCAS4 (ENSOARG00020011987)	ADNP (ENSOARG00020012056) #23	DPM1 (ENSOARG00020012189) #25	MOCS3 (ENSOARG00020012279) #26	KCNG1 (ENSOARG00020012313) #27	NFATC2 (ENSOARG00020012410) #28	ATP9A (ENSOARG00020013019) #29	SALL4 (ENSOARG00020013545) #30	ZFP64 (ENSOARG00020013675) #31	TSHZ2 (ENSOARG00020013957) #32	ENSOARG00020013991	CYP24A1 (ENSOARG00020014269) #35	ENSOARG00020014624 #36	DOK5 (ENSOARG00020014697)	CBLN4 (ENSOARG00020014929)
Bovinae	ANCESTRAL SPECIES	23	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT01010000224211.B	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00960000190565	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
American bison	DUPLICATION
American bison	MODERN SPECIES	2976	DDX27 (ENSBBBG00000011032) #7	ZNFX1 (ENSBBBG00000001981) #8	KCNB1 (ENSBBBG00000010994) #10	PTGIS (ENSBBBG00000010988) #11	RUM1 (ENSBBBG00000010979)	B4GALT5 (ENSBBBG00000010976) #12	SLC9A8 (ENSBBBG00000008144) #13	SPATA2 (ENSBBBG00000010928) #14	RNF114 (ENSBBBG00000010917) #15	SNAI1 (ENSBBBG00000010850) #16	ENSBBBG00000010845	PEDS1 (ENSBBBG00000008727) #18	ENSBBBG00000010817	PTPN1 (ENSBBBG00000010813) #20	RIPOR3 (ENSBBBG00000010794) #21	ENSBBBG00000010784 #22	ENSBBBG00000001888	ADNP (ENSBBBG00000010772) #23	DPM1 (ENSBBBG00000010763) #25	MOCS3 (ENSBBBG00000001882) #26	KCNG1 (ENSBBBG00000007300) #27	NFATC2 (ENSBBBG00000010742) #28
American bison	MODERN SPECIES	3252	ENSBBBG00000017210	ENSBBBG00000017110	SNRPE (ENSBBBG00000017104)	ENSBBBG00000017089	SOX13 (ENSBBBG00000017084)	ENSBBBG00000017052	ENSBBBG00000017041	REN (ENSBBBG00000017030)	ENSBBBG00000017012	GOLT1A (ENSBBBG00000016995)	PLEKHA6 (ENSBBBG00000004202)	PPP1R15B (ENSBBBG00000007662)	PIK3C2B (ENSBBBG00000006769)	ENSBBBG00000016701	LRRN2 (ENSBBBG00000008377)	ENSBBBG00000016546 #22	NFASC (ENSBBBG00000016499)	CNTN2 (ENSBBBG00000003994)	TMEM81 (ENSBBBG00000016030)	RBBP5 (ENSBBBG00000016023)	DSTYK (ENSBBBG00000015985)	TMCC2 (ENSBBBG00000003970)	NUAK2 (ENSBBBG00000015919)	KLHDC8A (ENSBBBG00000015896)	LEMD1 (ENSBBBG00000015870)	CDK18 (ENSBBBG00000015848)	MFSD4A (ENSBBBG00000015805)	ELK4 (ENSBBBG00000000783)	SLC45A3 (ENSBBBG00000003926)	NUCKS1 (ENSBBBG00000015727)	RAB29 (ENSBBBG00000015710)
Bos	ANCESTRAL SPECIES	24	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT01010000224211.B	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00960000190565	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Bos_a	ANCESTRAL SPECIES	7	ENSGT00940000157304	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Wild yak	MODERN SPECIES	1112		DDX27 (ENSBMUG00000011955) #7	ZNFX1 (ENSBMUG00000011933) #8	KCNB1 (ENSBMUG00000011862) #10	PTGIS (ENSBMUG00000011831) #11	B4GALT5 (ENSBMUG00000011807) #12	ENSBMUG00000011746 #13	ENSBMUG00000011733 #14	RNF114 (ENSBMUG00000011709) #15	SNAI1 (ENSBMUG00000011700) #16	ENSBMUG00000011684	PEDS1 (ENSBMUG00000011633) #18	ENSBMUG00000011615	PTPN1 (ENSBMUG00000011606) #20	RIPOR3 (ENSBMUG00000011578) #21	PARD6B (ENSBMUG00000011544) #22	BCAS4 (ENSBMUG00000011522)	ADNP (ENSBMUG00000011507) #23	DPM1 (ENSBMUG00000011486) #25	MOCS3 (ENSBMUG00000011469) #26	KCNG1 (ENSBMUG00000011454) #27	NFATC2 (ENSBMUG00000011413) #28	ATP9A (ENSBMUG00000009140) #29	ENSBMUG00000008019 #30	ENSBMUG00000008004 #31	ZFP64 (ENSBMUG00000007990) #31
Bos_b	ANCESTRAL SPECIES	26	ENSGT00940000155154.b #8	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT01010000224211.B	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000162354 #18	ENSGT00960000190565	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Cow	MODERN SPECIES	4	ZNFX1 (ENSBTAG00000020166) #8	KCNB1 (ENSBTAG00000027320) #10	PTGIS (ENSBTAG00000017537) #11	RUM1 (ENSBTAG00000053443)	B4GALT5 (ENSBTAG00000012626) #12	SLC9A8 (ENSBTAG00000008969) #13	SPATA2 (ENSBTAG00000018063) #14	RNF114 (ENSBTAG00000027317) #15	SNAI1 (ENSBTAG00000014554) #16	UBE2V1 (ENSBTAG00000027316) #17	PEDS1 (ENSBTAG00000010135) #18	ENSBTAG00000049867	CEBPB (ENSBTAG00000051972) #19	PTPN1 (ENSBTAG00000006616) #20	RIPOR3 (ENSBTAG00000012297) #21	PARD6B (ENSBTAG00000021601) #22	BCAS4 (ENSBTAG00000038929)	ADNP (ENSBTAG00000000340) #23	DPM1 (ENSBTAG00000007721) #25	MOCS3 (ENSBTAG00000049509) #26	KCNG1 (ENSBTAG00000003398) #27	NFATC2 (ENSBTAG00000018270) #28	ATP9A (ENSBTAG00000007962) #29	SALL4 (ENSBTAG00000003101) #30	ENSBTAG00000053699 #31	ZFP64 (ENSBTAG00000001512) #31	TSHZ2 (ENSBTAG00000007917) #32	ZNF217 (ENSBTAG00000030556) #33	BCAS1 (ENSBTAG00000000835) #34	CYP24A1 (ENSBTAG00000002765) #35	PFDN4 (ENSBTAG00000008812) #36
Hybrid Bos Indicus	DUPLICATION
Hybrid Bos Indicus	MODERN SPECIES	4	ZNFX1 (ENSBIXG00005019475) #8	KCNB1 (ENSBIXG00005019551) #10	PTGIS (ENSBIXG00005019610) #11	ENSBIXG00005019642	ENSBIXG00005019648	B4GALT5 (ENSBIXG00005019674) #12	SLC9A8 (ENSBIXG00005019931) #13	SPATA2 (ENSBIXG00005019973) #14	RNF114 (ENSBIXG00005019999) #15	SNAI1 (ENSBIXG00005020012) #16	UBE2V1 (ENSBIXG00005003288) #17	PEDS1 (ENSBIXG00005020099) #18	CEBPB (ENSBIXG00005003302) #19	PTPN1 (ENSBIXG00005020158) #20	RIPOR3 (ENSBIXG00005003360) #21	ENSBIXG00005003390 #22	ENSBIXG00005020294	ADNP (ENSBIXG00005020336) #23	ENSBIXG00005020382 #25	KCNG1 (ENSBIXG00005003446) #27	NFATC2 (ENSBIXG00005020482) #28	ATP9A (ENSBIXG00005020806) #29	SALL4 (ENSBIXG00005020915) #30	ENSBIXG00005020944	ZFP64 (ENSBIXG00005021039) #31	ENSBIXG00005021084	TSHZ2 (ENSBIXG00005021102) #32	ZNF217 (ENSBIXG00005021153) #33	BCAS1 (ENSBIXG00005021258) #34	CYP24A1 (ENSBIXG00005021353) #35	ENSBIXG00005021386
Hybrid Bos Indicus	MODERN SPECIES	7	ENSBIXG00005013493	ENSBIXG00005013483	ENSBIXG00005007531	SNRPE (ENSBIXG00005013431)	SOX13 (ENSBIXG00005013395)	ETNK2 (ENSBIXG00005001579)	REN (ENSBIXG00005013325)	ENSBIXG00005001568	GOLT1A (ENSBIXG00005013281)	PLEKHA6 (ENSBIXG00005013197)	PPP1R15B (ENSBIXG00005012957)	PIK3C2B (ENSBIXG00005012930)	ENSBIXG00005000283	ENSBIXG00005012584	LRRN2 (ENSBIXG00005012570)	ENSBIXG00005012536 #22	NFASC (ENSBIXG00005001357)	CNTN2 (ENSBIXG00005012349)	RBBP5 (ENSBIXG00005000379)	TMEM81 (ENSBIXG00005012289)	DSTYK (ENSBIXG00005001284)	TMCC2 (ENSBIXG00005012217)	NUAK2 (ENSBIXG00005012148)	KLHDC8A (ENSBIXG00005012119)	LEMD1 (ENSBIXG00005012033)	CDK18 (ENSBIXG00005011999)	MFSD4A (ENSBIXG00005000433)	ELK4 (ENSBIXG00005001160)	SLC45A3 (ENSBIXG00005011725)	ENSBIXG00005011686	SLC41A1 (ENSBIXG00005011597)
Atlantogenata	ANCESTRAL SPECIES	6	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00390000009113.a.b	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Afrotheria	ANCESTRAL SPECIES	85							ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Afrotheria_a	ANCESTRAL SPECIES	87							ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000162354 #18	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725	ENSGT00940000159728
Elephant	MODERN SPECIES	551							SLC9A8 (ENSLAFG00000015616) #13	SPATA2 (ENSLAFG00000023307) #14	RNF114 (ENSLAFG00000012571) #15	SNAI1 (ENSLAFG00000030265) #16	UBE2V1 (ENSLAFG00000027359) #17	PEDS1 (ENSLAFG00000007392) #18	ENSLAFG00000026180 #19	PTPN1 (ENSLAFG00000009137) #20	RIPOR3 (ENSLAFG00000009142) #21	PARD6B (ENSLAFG00000004136) #22	BCAS4 (ENSLAFG00000004138)	ADNP (ENSLAFG00000004139) #23	MOCS3 (ENSLAFG00000004140) #26	KCNG1 (ENSLAFG00000011027) #27	ENSLAFG00000013693	NFATC2 (ENSLAFG00000015276) #28	ATP9A (ENSLAFG00000004303) #29	SALL4 (ENSLAFG00000004309) #30	ZFP64 (ENSLAFG00000022960) #31	TSHZ2 (ENSLAFG00000002942) #32	ZNF217 (ENSLAFG00000017592) #33	BCAS1 (ENSLAFG00000002312) #34	CYP24A1 (ENSLAFG00000017059) #35	PFDN4 (ENSLAFG00000017064) #36	DOK5 (ENSLAFG00000030432)
Tenrec	MODERN SPECIES	2288																PARD6B (ENSETEG00000000317) #22
Xenarthra	ANCESTRAL SPECIES	405											ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27
Armadillo	MODERN SPECIES	1904				B4GALT5 (ENSDNOG00000001242) #12	SLC9A8 (ENSDNOG00000008724) #13	SPATA2 (ENSDNOG00000037737) #14	ENSDNOG00000041784	RNF114 (ENSDNOG00000009113) #15	ENSDNOG00000010139	ENSDNOG00000023834 #16	ENSDNOG00000013766	PEDS1 (ENSDNOG00000036975) #18	ENSDNOG00000043335	PTPN1 (ENSDNOG00000032438) #20	RIPOR3 (ENSDNOG00000032214) #21	PARD6B (ENSDNOG00000010098) #22	ENSDNOG00000045798	ADNP (ENSDNOG00000001749) #23	DPM1 (ENSDNOG00000036829) #25	MOCS3 (ENSDNOG00000008236) #26	KCNG1 (ENSDNOG00000044743) #27
Sloth	DUPLICATION
Sloth	DUPLICATION
Sloth	MODERN SPECIES	9768																ENSCHOG00000008310 #22
Sloth	MODERN SPECIES	13340																ENSCHOG00000012104 #22
Sloth	MODERN SPECIES	10636																ENSCHOG00000006652 #22
Marsupialia	ANCESTRAL SPECIES	15	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Opossum	DUPLICATION
Opossum	MODERN SPECIES		ZNFX1 (ENSMODG00000016290) #8	ENSMODG00000016292	KCNB1 (ENSMODG00000016295) #10	PTGIS (ENSMODG00000016298) #11	ENSMODG00000048050	ENSMODG00000016301 #12	SLC9A8 (ENSMODG00000016304) #13	SPATA2 (ENSMODG00000048515) #14	RNF114 (ENSMODG00000016308) #15	SNAI1 (ENSMODG00000045163) #16	UBE2V1 (ENSMODG00000040489) #17	PEDS1 (ENSMODG00000016312) #18	CEBPB (ENSMODG00000016314) #19	PTPN1 (ENSMODG00000016335) #20	RIPOR3 (ENSMODG00000016345) #21	ENSMODG00000016347 #22	BCAS4 (ENSMODG00000025761)	ADNP (ENSMODG00000016350) #23	DPM1 (ENSMODG00000016356) #25	MOCS3 (ENSMODG00000023246) #26	KCNG1 (ENSMODG00000016358) #27	NFATC2 (ENSMODG00000016363) #28	ATP9A (ENSMODG00000016381) #29	SALL4 (ENSMODG00000016387) #30	ZFP64 (ENSMODG00000016390) #31	ENSMODG00000048126	TSHZ2 (ENSMODG00000016391) #32	ENSMODG00000046132	ZNF217 (ENSMODG00000016392) #33	ENSMODG00000025790 #34	CYP24A1 (ENSMODG00000016400) #35
Opossum	MODERN SPECIES	5	ENSMODG00000002952	PIP5K1B (ENSMODG00000003063)	TMEM252 (ENSMODG00000003092)	PGM5 (ENSMODG00000003131)	ENSMODG00000024854	ENSMODG00000044468	ENSMODG00000039961	ENSMODG00000044962	ENSMODG00000045417	ENSMODG00000003306	KANK1 (ENSMODG00000003387)	DMRT1 (ENSMODG00000003401)	DMRT3 (ENSMODG00000003407)	DMRT2 (ENSMODG00000003430)	ENSMODG00000024673	ENSMODG00000024839 #22	SMARCA2 (ENSMODG00000003578)	ENSMODG00000041801	VLDLR (ENSMODG00000003620)	KCNV2 (ENSMODG00000003631)	ENSMODG00000049910	ENSMODG00000003635	SVEP1 (ENSMODG00000003939)	MUSK (ENSMODG00000003983)	LPAR1 (ENSMODG00000003999)	ENSMODG00000048116	SMC2 (ENSMODG00000004036)	ABCC1 (ENSMODG00000004194)	ENSMODG00000040466	ENSMODG00000024730	ENSMODG00000004204
Marsupialia_b	ANCESTRAL SPECIES	9	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Diprotodontia	ANCESTRAL SPECIES	2	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00940000162354 #18	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Diprotodontia_a	ANCESTRAL SPECIES	2	ENSGT00550000074997 #7	ENSGT00940000155154.b #8	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00940000162354 #18	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
koala	MODERN SPECIES	15	CSE1L (ENSPCIG00000023472)	STAU1 (ENSPCIG00000023269)	DDX27 (ENSPCIG00000008052) #7	ZNFX1 (ENSPCIG00000008051) #8	ENSPCIG00000012861	KCNB1 (ENSPCIG00000023253) #10	PTGIS (ENSPCIG00000023250) #11	B4GALT5 (ENSPCIG00000023287) #12	SLC9A8 (ENSPCIG00000023285) #13	SPATA2 (ENSPCIG00000023284) #14	RNF114 (ENSPCIG00000023283) #15	SNAI1 (ENSPCIG00000023282) #16	PEDS1 (ENSPCIG00000008453) #18	PTPN1 (ENSPCIG00000008446) #20	RIPOR3 (ENSPCIG00000008439) #21	PARD6B (ENSPCIG00000034199) #22	ENSPCIG00000011065	ADNP (ENSPCIG00000011069) #23	DPM1 (ENSPCIG00000011076) #25	KCNG1 (ENSPCIG00000009066) #27	NFATC2 (ENSPCIG00000022852) #28	ATP9A (ENSPCIG00000022842) #29	SALL4 (ENSPCIG00000022838) #30	ZFP64 (ENSPCIG00000022836) #31	TSHZ2 (ENSPCIG00000011626) #32	ENSPCIG00000011628	ZNF217 (ENSPCIG00000011630) #33	BCAS1 (ENSPCIG00000007829) #34	CYP24A1 (ENSPCIG00000007851) #35	PFDN4 (ENSPCIG00000007853) #36	DOK5 (ENSPCIG00000007855)
Common wonbat	MODERN SPECIES	35	STAU1 (ENSVURG00010000505)	DDX27 (ENSVURG00010000297) #7	ZNFX1 (ENSVURG00010000257) #8	ENSVURG00010000195	KCNB1 (ENSVURG00010000184) #10	PTGIS (ENSVURG00010000163) #11	B4GALT5 (ENSVURG00010018926) #12	SLC9A8 (ENSVURG00010018911) #13	SPATA2 (ENSVURG00010018907) #14	RNF114 (ENSVURG00010018904) #15	SNAI1 (ENSVURG00010018899) #16	UBE2V1 (ENSVURG00010018896) #17	ENSVURG00010018891	PTPN1 (ENSVURG00010018881) #20	RIPOR3 (ENSVURG00010018843) #21	PARD6B (ENSVURG00010018835) #22	BCAS4 (ENSVURG00010018830)	ADNP (ENSVURG00010018827) #23	DPM1 (ENSVURG00010018817) #25	MOCS3 (ENSVURG00010018816) #26	KCNG1 (ENSVURG00010018813) #27	NFATC2 (ENSVURG00010018804) #28	ATP9A (ENSVURG00010018777) #29	SALL4 (ENSVURG00010018759) #30	ZFP64 (ENSVURG00010018745) #31	TSHZ2 (ENSVURG00010018738) #32	ENSVURG00010018729	ZNF217 (ENSVURG00010018725) #33	ENSVURG00010018716 #34	CYP24A1 (ENSVURG00010018690) #35	PFDN4 (ENSVURG00010018680) #36
Wallaby	MODERN SPECIES	3149																PARD6B (ENSMEUG00000004237) #22
Tasmanian devil	MODERN SPECIES	1	ZNFX1 (ENSSHAG00000008813) #8	ENSSHAG00000008072	KCNB1 (ENSSHAG00000006318) #10	PTGIS (ENSSHAG00000005034) #11	B4GALT5 (ENSSHAG00000032392) #12	SLC9A8 (ENSSHAG00000021095) #13	ENSSHAG00000022219	SPATA2 (ENSSHAG00000011311) #14	RNF114 (ENSSHAG00000001827) #15	SNAI1 (ENSSHAG00000011015) #16	UBE2V1 (ENSSHAG00000030275) #17	ENSSHAG00000022934	CEBPB (ENSSHAG00000029404) #19	PTPN1 (ENSSHAG00000031375) #20	RIPOR3 (ENSSHAG00000025378) #21	PARD6B (ENSSHAG00000018814) #22	BCAS4 (ENSSHAG00000018778)	ADNP (ENSSHAG00000026614) #23	DPM1 (ENSSHAG00000029685) #25	MOCS3 (ENSSHAG00000018733) #26	KCNG1 (ENSSHAG00000018683) #27	NFATC2 (ENSSHAG00000018222) #28	ATP9A (ENSSHAG00000025449) #29	SALL4 (ENSSHAG00000018013) #30	ZFP64 (ENSSHAG00000021784) #31	TSHZ2 (ENSSHAG00000015362) #32	ENSSHAG00000031732	ZNF217 (ENSSHAG00000030424) #33	BCAS1 (ENSSHAG00000012411) #34	CYP24A1 (ENSSHAG00000011826) #35	PFDN4 (ENSSHAG00000024204) #36
Platypus	MODERN SPECIES	19	CSE1L (ENSOANG00000006402)	ZNFX1 (ENSOANG00000006399) #8	DDX27 (ENSOANG00000006395) #7	STAU1 (ENSOANG00000006394)	KCNB1 (ENSOANG00000044225) #10	PTGIS (ENSOANG00000006390) #11	SLC9A8 (ENSOANG00000008683) #13	SPATA2 (ENSOANG00000046379) #14	RNF114 (ENSOANG00000040087) #15	SNAI1 (ENSOANG00000008681) #16	ENSOANG00000046821 #17	ENSOANG00000008680	CEBPB (ENSOANG00000046874) #19	PTPN1 (ENSOANG00000008679) #20	RIPOR3 (ENSOANG00000008677) #21	PARD6B (ENSOANG00000008676) #22	ENSOANG00000038610	ENSOANG00000036298 #25	MOCS3 (ENSOANG00000044020) #26	KCNG1 (ENSOANG00000008672) #27	NFATC2 (ENSOANG00000008671) #28	ATP9A (ENSOANG00000008668) #29	SALL4 (ENSOANG00000008667) #30	ZFP64 (ENSOANG00000036388) #31	TSHZ2 (ENSOANG00000003138) #32	ENSOANG00000043358	ZNF217 (ENSOANG00000003139) #33	ENSOANG00000009238 #36	ENSOANG00000003140 #34	ENSOANG00000019907 #35	DOK5 (ENSOANG00000009239)
Sauria	ANCESTRAL SPECIES	16	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00740000115534.a.a	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Archelosauria	ANCESTRAL SPECIES		ENSGT00940000157304	ENSGT00940000165342	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Archosauria	ANCESTRAL SPECIES	13	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00740000115534.a.a	ENSGT00390000009113.a.b	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Aves	ANCESTRAL SPECIES	16	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00740000115534.a.a	ENSGT00390000009113.a.b	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Neognathae	ANCESTRAL SPECIES	16	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00740000115534.a.a	ENSGT00390000009113.a.b	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Galloanserae	ANCESTRAL SPECIES	15	ENSGT00550000074884	ENSGT00940000157304	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Anatidae	ANCESTRAL SPECIES	22	ENSGT00550000074884	ENSGT00940000157304	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Duck	MODERN SPECIES	12	RBL1 (ENSAPLG00000014817)	SAMHD1 (ENSAPLG00000014604)	ENSAPLG00000014598	PIGU (ENSAPLG00000014171)	TP53INP2 (ENSAPLG00000029946)	NCOA6 (ENSAPLG00000013856)	GGT7 (ENSAPLG00000013413)	TGIF2 (ENSAPLG00000022727)	DLGAP4 (ENSAPLG00000012891)	AAR2 (ENSAPLG00000012763)	EPB41L1 (ENSAPLG00000012144)	ENSAPLG00000012085	CEBPB (ENSAPLG00000020861) #19	PTPN1 (ENSAPLG00000008547) #20	RIPOR3 (ENSAPLG00000007994) #21	PARD6B (ENSAPLG00000019880) #22	ADNP (ENSAPLG00000007870) #23	DPM1 (ENSAPLG00000007501) #25	KCNG1 (ENSAPLG00000007454) #27	NFATC2 (ENSAPLG00000007259) #28	ATP9A (ENSAPLG00000006598) #29	ENSAPLG00000028344	PRPF6 (ENSAPLG00000015219)	TCEA2 (ENSAPLG00000010208)	RGS19 (ENSAPLG00000006136)	OPRL1 (ENSAPLG00000026067)	NPBWR2 (ENSAPLG00000011667)	MYT1 (ENSAPLG00000007386)	PCMTD2 (ENSAPLG00000007753)	ENSAPLG00000007917	SRMS (ENSAPLG00000008178)
Pink-footed goose	MODERN SPECIES	10	STAU1 (ENSABRG00000020968)	ENSABRG00000021083	KCNB1 (ENSABRG00000021087) #10	ENSABRG00000021090	B4GALT5 (ENSABRG00000021091) #12	SLC9A8 (ENSABRG00000021093) #13	ENSABRG00000021105	SPATA2 (ENSABRG00000021109) #14	RNF114 (ENSABRG00000021113) #15	ENSABRG00000021119 #16	ENSABRG00000021123	ENSABRG00000021125	CEBPB (ENSABRG00000021130) #19	PTPN1 (ENSABRG00000021148) #20	RIPOR3 (ENSABRG00000021155) #21	PARD6B (ENSABRG00000021158) #22	BCAS4 (ENSABRG00000021167)	ENSABRG00000021174 #23	ENSABRG00000021179 #23	DPM1 (ENSABRG00000021185) #25	KCNG1 (ENSABRG00000021189) #27	NFATC2 (ENSABRG00000021208) #28	ATP9A (ENSABRG00000021425) #29	SALL4 (ENSABRG00000021954) #30	ZFP64 (ENSABRG00000021962) #31	TSHZ2 (ENSABRG00000021972) #32	ENSABRG00000021974	ZNF217 (ENSABRG00000021976) #33	BCAS1 (ENSABRG00000021981) #34	CYP24A1 (ENSABRG00000021985) #35	PFDN4 (ENSABRG00000021989) #36
Phasianidae	ANCESTRAL SPECIES	15					ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.b.a	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a.z #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT01040000244732	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Phasianidae_b	ANCESTRAL SPECIES	15						ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a.z #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT01040000244732	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Chicken	MODERN SPECIES	12					B4GALT5 (ENSGALG00010013192) #12	SLC9A8 (ENSGALG00010013171) #13	ENSGALG00010013141	SPATA2 (ENSGALG00010013131) #14	RNF114 (ENSGALG00010013119) #15	SNAI1 (ENSGALG00010015071) #16	UBE2V1 (ENSGALG00010014676) #17	TMEM189 (ENSGALG00010014611)	CEBPB (ENSGALG00010014573) #19	PTPN1 (ENSGALG00010014474) #20	RIPOR3 (ENSGALG00010014400) #21	PARD6B (ENSGALG00010014272) #22	ADNP (ENSGALG00010014260) #23	DPM1 (ENSGALG00010014205) #25	MOCS3 (ENSGALG00010014186) #26	KCNG1 (ENSGALG00010014148) #27	NFATC2 (ENSGALG00010014143) #28	ATP9A (ENSGALG00010015362) #29	SALL4 (ENSGALG00010015318) #30	ZFP64 (ENSGALG00010015291) #31	ENSGALG00010015740	TSHZ2 (ENSGALG00010015734) #32	ZNF217 (ENSGALG00010015668) #33	BCAS1 (ENSGALG00010015485) #34	CYP24A1 (ENSGALG00010015154) #35	PFDN4 (ENSGALG00010015141) #36	DOK5 (ENSGALG00010015131)
Turkey	MODERN SPECIES	14	ENSMGAG00000009274 #35	BCAS1 (ENSMGAG00000009281) #34	ENSMGAG00000015562 #32	ENSMGAG00000018226	ENSMGAG00000019018	ENSMGAG00000009292 #33	ENSMGAG00000018687	ENSMGAG00000009301 #31	ENSMGAG00000009344 #30	NFATC2 (ENSMGAG00000009346) #28	ENSMGAG00000022874 #26	ENSMGAG00000009354 #27	ENSMGAG00000021003	ENSMGAG00000009359 #25	ENSMGAG00000009385 #23	PARD6B (ENSMGAG00000009390) #22	ENSMGAG00000021421 #21	ENSMGAG00000009421 #20	ENSMGAG00000009391 #21	ENSMGAG00000020444 #19	ENSMGAG00000022811	ENSMGAG00000020197	ENSMGAG00000009447 #16	ENSMGAG00000009468 #15	ENSMGAG00000010224 #14	ENSMGAG00000010231 #13	ENSMGAG00000010247 #12	ENSMGAG00000019930	ENSMGAG00000004105	ENSMGAG00000004091	ENSMGAG00000017969
Japanese quail	MODERN SPECIES	12						B4GALT5 (ENSCJPG00005007330) #12	SLC9A8 (ENSCJPG00005007329) #13	SPATA2 (ENSCJPG00005007328) #14	RNF114 (ENSCJPG00005007327) #15	ENSCJPG00005007326 #16	ENSCJPG00005007310	ENSCJPG00005007309	CEBPB (ENSCJPG00005007308) #19	PTPN1 (ENSCJPG00005007304) #20	RIPOR3 (ENSCJPG00005007303) #21	PARD6B (ENSCJPG00005007302) #22	ADNP (ENSCJPG00005007301) #23	DPM1 (ENSCJPG00005007297) #25	MOCS3 (ENSCJPG00005007296) #26	KCNG1 (ENSCJPG00005007295) #27	NFATC2 (ENSCJPG00005007292) #28	ATP9A (ENSCJPG00005007291) #29	SALL4 (ENSCJPG00005007289) #30	ZFP64 (ENSCJPG00005007284) #31	ENSCJPG00005007281	TSHZ2 (ENSCJPG00005007280) #32	ENSCJPG00005007279	ZNF217 (ENSCJPG00005007278) #33	ENSCJPG00005007275 #34	CYP24A1 (ENSCJPG00005007273) #35	PFDN4 (ENSCJPG00005007271) #36
Neognathae_b	ANCESTRAL SPECIES	17	ENSGT00550000074884	ENSGT00940000157304	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Passeriformes	ANCESTRAL SPECIES	19	ENSGT00550000074884	ENSGT00940000157304	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Great tit	MODERN SPECIES	12	STAU1 (ENSPMJG00000009215)	ENSPMJG00000009213	KCNB1 (ENSPMJG00000009211) #10	B4GALT5 (ENSPMJG00000009209) #12	ENSPMJG00000009208	SLC9A8 (ENSPMJG00000009201) #13	ENSPMJG00000009199	SPATA2 (ENSPMJG00000009198) #14	RNF114 (ENSPMJG00000009197) #15	ENSPMJG00000009192 #16	ENSPMJG00000009188	CEBPB (ENSPMJG00000009183) #19	ENSPMJG00000009176	PTPN1 (ENSPMJG00000009171) #20	RIPOR3 (ENSPMJG00000009168) #21	PARD6B (ENSPMJG00000009164) #22	ADNP (ENSPMJG00000009162) #23	DPM1 (ENSPMJG00000009147) #25	MOCS3 (ENSPMJG00000009145) #26	KCNG1 (ENSPMJG00000009144) #27	NFATC2 (ENSPMJG00000009143) #28	ATP9A (ENSPMJG00000009140) #29	SALL4 (ENSPMJG00000009135) #30	ZFP64 (ENSPMJG00000009131) #31	ENSPMJG00000009123	TSHZ2 (ENSPMJG00000009122) #32	ENSPMJG00000009115	ZNF217 (ENSPMJG00000009111) #33	ENSPMJG00000009107 #34	CYP24A1 (ENSPMJG00000009102) #35	PFDN4 (ENSPMJG00000009095) #36
Passeriformes_d	ANCESTRAL SPECIES	19	ENSGT00550000074884	ENSGT00940000157304	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Flycatcher	MODERN SPECIES	12	ENSFALG00000012940	KCNB1 (ENSFALG00000025403) #10	B4GALT5 (ENSFALG00000012949) #12	ENSFALG00000027076	SLC9A8 (ENSFALG00000012954) #13	ENSFALG00000024445	SPATA2 (ENSFALG00000024852) #14	RNF114 (ENSFALG00000012963) #15	ENSFALG00000012974 #16	ENSFALG00000012987	ENSFALG00000012994	CEBPB (ENSFALG00000014081) #19	ENSFALG00000027297	PTPN1 (ENSFALG00000026835) #20	RIPOR3 (ENSFALG00000013024) #21	PARD6B (ENSFALG00000028746) #22	ADNP (ENSFALG00000023912) #23	DPM1 (ENSFALG00000013035) #25	MOCS3 (ENSFALG00000013036) #26	KCNG1 (ENSFALG00000013038) #27	NFATC2 (ENSFALG00000013042) #28	ATP9A (ENSFALG00000013078) #29	SALL4 (ENSFALG00000013149) #30	ZFP64 (ENSFALG00000013162) #31	TSHZ2 (ENSFALG00000013173) #32	ZNF217 (ENSFALG00000013177) #33	ENSFALG00000013180 #34	CYP24A1 (ENSFALG00000013185) #35	ENSFALG00000013193 #36	ENSFALG00000023955 #36	DOK5 (ENSFALG00000010957)
Passeriformes_g	ANCESTRAL SPECIES	19	ENSGT00940000158950	ENSGT00550000074884	ENSGT00940000157304	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Medium ground finch	MODERN SPECIES	59	SULF2 (ENSGFOG00000003155)	PREX1 (ENSGFOG00000001973)	ARFGEF2 (ENSGFOG00000001845)	CSE1L (ENSGFOG00000001826)	STAU1 (ENSGFOG00000001807)	KCNB1 (ENSGFOG00000001787) #10	B4GALT5 (ENSGFOG00000001778) #12	SLC9A8 (ENSGFOG00000001763) #13	ENSGFOG00000001754	SPATA2 (ENSGFOG00000001747) #14	RNF114 (ENSGFOG00000001738) #15	ENSGFOG00000001721	ENSGFOG00000001699	PTPN1 (ENSGFOG00000001654) #20	RIPOR3 (ENSGFOG00000001624) #21	PARD6B (ENSGFOG00000001604) #22	ADNP (ENSGFOG00000001590) #23	DPM1 (ENSGFOG00000001576) #25	ENSGFOG00000001569 #26	KCNG1 (ENSGFOG00000001557) #27	ENSGFOG00000001521 #28	ENSGFOG00000001507 #28	ATP9A (ENSGFOG00000001492) #29	SALL4 (ENSGFOG00000001487) #30	TSHZ2 (ENSGFOG00000001481) #32	ENSGFOG00000001475	ZNF217 (ENSGFOG00000001470) #33	ENSGFOG00000001462 #34	CYP24A1 (ENSGFOG00000001452) #35	PFDN4 (ENSGFOG00000001440) #36	DOK5 (ENSGFOG00000001429)
Passeroidea	ANCESTRAL SPECIES	18	ENSGT00940000158950	ENSGT00550000074884	ENSGT00940000157304	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Common canary	MODERN SPECIES	21	CSE1L (ENSSCAG00000015620)	STAU1 (ENSSCAG00000015612)	ENSSCAG00000015599	ENSSCAG00000015594	KCNB1 (ENSSCAG00000015592) #10	B4GALT5 (ENSSCAG00000015587) #12	SLC9A8 (ENSSCAG00000015583) #13	ENSSCAG00000015577	SPATA2 (ENSSCAG00000015573) #14	RNF114 (ENSSCAG00000015571) #15	ENSSCAG00000015567	ENSSCAG00000015563	CEBPB (ENSSCAG00000015560) #19	PTPN1 (ENSSCAG00000015550) #20	RIPOR3 (ENSSCAG00000015538) #21	PARD6B (ENSSCAG00000015530) #22	ENSSCAG00000015525	ADNP (ENSSCAG00000015521) #23	DPM1 (ENSSCAG00000015518) #25	MOCS3 (ENSSCAG00000015515) #26	KCNG1 (ENSSCAG00000015512) #27	NFATC2 (ENSSCAG00000015508) #28	ATP9A (ENSSCAG00000015481) #29	ZFP64 (ENSSCAG00000015462) #31	SALL4 (ENSSCAG00000015460) #30	ENSSCAG00000015455 #29	TSHZ2 (ENSSCAG00000015452) #32	ENSSCAG00000015450	ZNF217 (ENSSCAG00000015449) #33	ENSSCAG00000015447 #34	CYP24A1 (ENSSCAG00000015444) #35
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	13	PREX1 (ENSTGUG00000008911)	ARFGEF2 (ENSTGUG00000008857)	CSE1L (ENSTGUG00000008823)	STAU1 (ENSTGUG00000008784)	KCNB1 (ENSTGUG00000019417) #10	B4GALT5 (ENSTGUG00000008769) #12	SLC9A8 (ENSTGUG00000008749) #13	SPATA2 (ENSTGUG00000008741) #14	RNF114 (ENSTGUG00000008728) #15	ENSTGUG00000008724 #16	UBE2V1 (ENSTGUG00000020097)	TMEM189 (ENSTGUG00000018828)	CEBPB (ENSTGUG00000021999) #19	ENSTGUG00000013852 #20	ENSTGUG00000008672 #21	ENSTGUG00000021704 #22	ENSTGUG00000026730 #23	ENSTGUG00000020509 #25	ENSTGUG00000008642 #26	ENSTGUG00000008640 #27	ENSTGUG00000008617 #28	ENSTGUG00000026306 #29	ENSTGUG00000025631 #30	ENSTGUG00000026158 #31	UBE2V1 (ENSTGUG00000023422) #17	ENSTGUG00000029053	CEBPB (ENSTGUG00000029712) #19	ENSTGUG00000008681 #20	ENSTGUG00000025838 #21	ENSTGUG00000026980 #22	ENSTGUG00000008662 #23
Zebra finch	MODERN SPECIES	13	ENSTGUG00000008672 #21	ENSTGUG00000021704 #22	ENSTGUG00000026730 #23	ENSTGUG00000020509 #25	ENSTGUG00000008642 #26	ENSTGUG00000008640 #27	ENSTGUG00000008617 #28	ENSTGUG00000026306 #29	ENSTGUG00000025631 #30	ENSTGUG00000026158 #31	UBE2V1 (ENSTGUG00000023422) #17	ENSTGUG00000029053	CEBPB (ENSTGUG00000029712) #19	ENSTGUG00000008681 #20	ENSTGUG00000025838 #21	ENSTGUG00000026980 #22	ENSTGUG00000008662 #23	ENSTGUG00000008645 #25	ENSTGUG00000029116 #26	ENSTGUG00000024127 #27	ENSTGUG00000020398 #28	ENSTGUG00000018954	ENSTGUG00000028285	ENSTGUG00000008565 #29	ENSTGUG00000024302 #30	ENSTGUG00000028603 #31	TSHZ2 (ENSTGUG00000008551) #32	ZNF217 (ENSTGUG00000023199) #33	BCAS1 (ENSTGUG00000019321) #34	CYP24A1 (ENSTGUG00000008516) #35	ENSTGUG00000008507 #36
Neognathae_c	ANCESTRAL SPECIES	20	ENSGT00550000074884	ENSGT00940000157304	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Golden eagle	MODERN SPECIES	19	STAU1 (ENSACCG00020009713)	ENSACCG00020009654	KCNB1 (ENSACCG00020009641) #10	B4GALT5 (ENSACCG00020009619) #12	SLC9A8 (ENSACCG00020009595) #13	ENSACCG00020009564	ENSACCG00020009538 #14	ENSACCG00020009530 #14	RNF114 (ENSACCG00020009519) #15	ENSACCG00020009513 #16	ENSACCG00020009505	ENSACCG00020009490	CEBPB (ENSACCG00020009480) #19	PTPN1 (ENSACCG00020009468) #20	RIPOR3 (ENSACCG00020009436) #21	PARD6B (ENSACCG00020009406) #22	BCAS4 (ENSACCG00020009398)	ADNP (ENSACCG00020009379) #23	DPM1 (ENSACCG00020009351) #25	MOCS3 (ENSACCG00020009342) #26	KCNG1 (ENSACCG00020009334) #27	NFATC2 (ENSACCG00020009326) #28	ATP9A (ENSACCG00020009297) #29	SALL4 (ENSACCG00020009275) #30	ZFP64 (ENSACCG00020009263) #31	ENSACCG00020009252	TSHZ2 (ENSACCG00020009249) #32	ZNF217 (ENSACCG00020009238) #33	BCAS1 (ENSACCG00020009215) #34	CYP24A1 (ENSACCG00020009197) #35	PFDN4 (ENSACCG00020009177) #36
Kakapo	MODERN SPECIES	5	CSE1L (ENSSHBG00005007150)	STAU1 (ENSSHBG00005007129)	ENSSHBG00005007066	KCNB1 (ENSSHBG00005007055) #10	B4GALT5 (ENSSHBG00005007045) #12	SLC9A8 (ENSSHBG00005007027) #13	ENSSHBG00005007013	SPATA2 (ENSSHBG00005006999) #14	RNF114 (ENSSHBG00005006989) #15	ENSSHBG00005006977 #16	UBE2V1 (ENSSHBG00005006945) #17	ENSSHBG00005006905	CEBPB (ENSSHBG00005006889) #19	PTPN1 (ENSSHBG00005006848) #20	RIPOR3 (ENSSHBG00005006743) #21	PARD6B (ENSSHBG00005006723) #22	ADNP (ENSSHBG00005006679) #23	DPM1 (ENSSHBG00005006655) #25	MOCS3 (ENSSHBG00005006649) #26	KCNG1 (ENSSHBG00005006625) #27	NFATC2 (ENSSHBG00005006602) #28	ATP9A (ENSSHBG00005006556) #29	SALL4 (ENSSHBG00005006532) #30	ZFP64 (ENSSHBG00005006515) #31	TSHZ2 (ENSSHBG00005006499) #32	ENSSHBG00005006486	ZNF217 (ENSSHBG00005006452) #33	ENSSHBG00005006435 #34	CYP24A1 (ENSSHBG00005006412) #35	PFDN4 (ENSSHBG00005006394) #36	DOK5 (ENSSHBG00005006374)
African ostrich	MODERN SPECIES	933													PEDS1 (ENSSCUG00000017967) #18	PTPN1 (ENSSCUG00000017965) #20	RIPOR3 (ENSSCUG00000017960) #21	PARD6B (ENSSCUG00000017958) #22	BCAS4 (ENSSCUG00000017956)	ADNP (ENSSCUG00000017952) #23	DPM1 (ENSSCUG00000017948) #25	MOCS3 (ENSSCUG00000017946) #26	KCNG1 (ENSSCUG00000017944) #27	NFATC2 (ENSSCUG00000017941) #28	ATP9A (ENSSCUG00000017937) #29	SALL4 (ENSSCUG00000017934) #30	ZFP64 (ENSSCUG00000017932) #31	TSHZ2 (ENSSCUG00000017928) #32	ENSSCUG00000017927	ZNF217 (ENSSCUG00000017926) #33	BCAS1 (ENSSCUG00000017920) #34	CYP24A1 (ENSSCUG00000017918) #35	PFDN4 (ENSSCUG00000017917) #36
Australian saltwater crocodile	MODERN SPECIES	59					B4GALT5 (ENSCPRG00005004584) #12	SLC9A8 (ENSCPRG00005004589) #13	ENSCPRG00005004597	SPATA2 (ENSCPRG00005004598) #14	RNF114 (ENSCPRG00005004600) #15	ENSCPRG00005004601	UBE2V1 (ENSCPRG00005004609) #17	ENSCPRG00005004612	CEBPB (ENSCPRG00005004615) #19	PTPN1 (ENSCPRG00005004625) #20	RIPOR3 (ENSCPRG00005004627) #21	PARD6B (ENSCPRG00005004641) #22	BCAS4 (ENSCPRG00005004645)	ADNP (ENSCPRG00005004649) #23	DPM1 (ENSCPRG00005004652) #25	MOCS3 (ENSCPRG00005004658) #26	KCNG1 (ENSCPRG00005004660) #27	NFATC2 (ENSCPRG00005004673) #28	ATP9A (ENSCPRG00005004681) #29	SALL4 (ENSCPRG00005004707) #30	ZFP64 (ENSCPRG00005004712) #31	TSHZ2 (ENSCPRG00005004716) #32	ZNF217 (ENSCPRG00005004720) #33	ENSCPRG00005004723	BCAS1 (ENSCPRG00005004725) #34	CYP24A1 (ENSCPRG00005004739) #35	PFDN4 (ENSCPRG00005004832) #36
Cryptodira	ANCESTRAL SPECIES	26		ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Testudinoidea	ANCESTRAL SPECIES	25		ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.b #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Testudinidae	ANCESTRAL SPECIES	28		ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.b #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Goode s thornscrub tortoise	MODERN SPECIES	5	ENSGEVG00005005413	KCNB1 (ENSGEVG00005005379) #10	PTGIS (ENSGEVG00005005340) #11	B4GALT5 (ENSGEVG00005005309) #12	SLC9A8 (ENSGEVG00005005269) #13	ENSGEVG00005005232	SPATA2 (ENSGEVG00005005161) #14	RNF114 (ENSGEVG00005005144) #15	SNAI1 (ENSGEVG00005005118) #16	UBE2V1 (ENSGEVG00005005100) #17	ENSGEVG00005005075	CEBPB (ENSGEVG00005005065) #19	ENSGEVG00005005041	PTPN1 (ENSGEVG00005005024) #20	RIPOR3 (ENSGEVG00005004951) #21	PARD6B (ENSGEVG00005004914) #22	BCAS4 (ENSGEVG00005004895)	ADNP (ENSGEVG00005004865) #23	DPM1 (ENSGEVG00005004806) #25	MOCS3 (ENSGEVG00005004780) #26	KCNG1 (ENSGEVG00005004753) #27	NFATC2 (ENSGEVG00005004705) #28	ATP9A (ENSGEVG00005004625) #29	SALL4 (ENSGEVG00005004574) #30	ZFP64 (ENSGEVG00005004540) #31	TSHZ2 (ENSGEVG00005004514) #32	ZNF217 (ENSGEVG00005004473) #33	BCAS1 (ENSGEVG00005004419) #34	CYP24A1 (ENSGEVG00005004360) #35	PFDN4 (ENSGEVG00005004335) #36	DOK5 (ENSGEVG00005004302)
Abingdon island giant tortoise	MODERN SPECIES	2270					B4GALT5 (ENSCABG00000016702) #12	SLC9A8 (ENSCABG00000016710) #13	ENSCABG00000016711	SPATA2 (ENSCABG00000016712) #14	RNF114 (ENSCABG00000016716) #15	SNAI1 (ENSCABG00000016717) #16	UBE2V1 (ENSCABG00000016718) #17	ENSCABG00000016720	CEBPB (ENSCABG00000016721) #19	PTPN1 (ENSCABG00000016725) #20	RIPOR3 (ENSCABG00000016727) #21	PARD6B (ENSCABG00000016733) #22	BCAS4 (ENSCABG00000016735)	ADNP (ENSCABG00000016738) #23	DPM1 (ENSCABG00000016741) #25	MOCS3 (ENSCABG00000016745) #26	KCNG1 (ENSCABG00000016751) #27	NFATC2 (ENSCABG00000016756) #28	ATP9A (ENSCABG00000016759) #29	SALL4 (ENSCABG00000016763) #30
Emydidae	ANCESTRAL SPECIES	31		ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854.b #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230.g #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Three-toed box turtle	MODERN SPECIES	60	ENSTMTG00000002157	ENSTMTG00000002122	KCNB1 (ENSTMTG00000002113) #10	PTGIS (ENSTMTG00000002102) #11	B4GALT5 (ENSTMTG00000002093) #12	SLC9A8 (ENSTMTG00000002081) #13	ENSTMTG00000002072	SPATA2 (ENSTMTG00000002068) #14	RNF114 (ENSTMTG00000002062) #15	SNAI1 (ENSTMTG00000002055) #16	UBE2V1 (ENSTMTG00000002048) #17	ENSTMTG00000002040	CEBPB (ENSTMTG00000002034) #19	PTPN1 (ENSTMTG00000002024) #20	RIPOR3 (ENSTMTG00000001968) #21	PARD6B (ENSTMTG00000001950) #22	BCAS4 (ENSTMTG00000001939)	ADNP (ENSTMTG00000001931) #23	DPM1 (ENSTMTG00000001915) #25	MOCS3 (ENSTMTG00000001910) #26	KCNG1 (ENSTMTG00000001902) #27	NFATC2 (ENSTMTG00000001812) #28	ATP9A (ENSTMTG00000001771) #29	SALL4 (ENSTMTG00000001765) #30	ZFP64 (ENSTMTG00000001756) #31	TSHZ2 (ENSTMTG00000001753) #32	ENSTMTG00000001749	ZNF217 (ENSTMTG00000001742) #33	BCAS1 (ENSTMTG00000001728) #34	CYP24A1 (ENSTMTG00000001709) #35	PFDN4 (ENSTMTG00000001695) #36
painted turtle	MODERN SPECIES	713	SDC3 (ENSCPBG00000009122)	PUM1 (ENSCPBG00000009288)	NKAIN1 (ENSCPBG00000015569)	SNRNP40 (ENSCPBG00000015574)	ZCCHC17 (ENSCPBG00000015590)	B4GALT5 (ENSCPBG00000015592) #12	SLC9A8 (ENSCPBG00000015593) #13	ENSCPBG00000015595	SPATA2 (ENSCPBG00000015596) #14	RNF114 (ENSCPBG00000015597) #15	UBE2V1 (ENSCPBG00000015599) #17	ENSCPBG00000015600	CEBPB (ENSCPBG00000015601) #19	PTPN1 (ENSCPBG00000015605) #20	RIPOR3 (ENSCPBG00000015606) #21	PARD6B (ENSCPBG00000015608) #22	BCAS4 (ENSCPBG00000015609)	ADNP (ENSCPBG00000015610) #23	DPM1 (ENSCPBG00000015612) #25	ENSCPBG00000015615	SERINC2 (ENSCPBG00000015618)	ENSCPBG00000015621	ENSCPBG00000015623	HIVEP3 (ENSCPBG00000015630)	EDN2 (ENSCPBG00000015635)	FOXO6 (ENSCPBG00000015641)	SCMH1 (ENSCPBG00000015645)	SLFNL1 (ENSCPBG00000015648)	CTPS1 (ENSCPBG00000015650)	CITED4 (ENSCPBG00000015653)	STX12 (ENSCPBG00000015655)
Chinese turtle	MODERN SPECIES	1549			B4GALT5 (ENSPSIG00000003679) #12	ENSPSIG00000003666 #13	ENSPSIG00000003663 #13	ENSPSIG00000003660	SPATA2 (ENSPSIG00000003635) #14	RNF114 (ENSPSIG00000003620) #15	SNAI1 (ENSPSIG00000003607) #16	ENSPSIG00000000033	ENSPSIG00000016812	CEBPB (ENSPSIG00000016606) #19	PTPN1 (ENSPSIG00000016536) #20	ENSPSIG00000016269 #21	ENSPSIG00000016266 #21	PARD6B (ENSPSIG00000016185) #22	BCAS4 (ENSPSIG00000015713)	ADNP (ENSPSIG00000015209) #23	DPM1 (ENSPSIG00000014853) #25	MOCS3 (ENSPSIG00000014735) #26	KCNG1 (ENSPSIG00000014441) #27	NFATC2 (ENSPSIG00000013745) #28	ATP9A (ENSPSIG00000009087) #29	SALL4 (ENSPSIG00000009066) #30	ZFP64 (ENSPSIG00000008007) #31	TSHZ2 (ENSPSIG00000007559) #32	BCAS1 (ENSPSIG00000007149) #34	PFDN4 (ENSPSIG00000006869) #36	CYP24A1 (ENSPSIG00000016130) #35	CBLN4 (ENSPSIG00000016039)	MC3R (ENSPSIG00000000032)
Lepidosauria	ANCESTRAL SPECIES	6	ENSGT00940000165342	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
tuatara	MODERN SPECIES	1735	STAU1 (ENSSPUG00000017983)	ENSSPUG00000018009	KCNB1 (ENSSPUG00000018014) #10	PTGIS (ENSSPUG00000018018) #11	B4GALT5 (ENSSPUG00000018025) #12	SLC9A8 (ENSSPUG00000018029) #13	SPATA2 (ENSSPUG00000018042) #14	RNF114 (ENSSPUG00000018052) #15	SNAI1 (ENSSPUG00000018057) #16	UBE2V1 (ENSSPUG00000018065) #17	ENSSPUG00000018070	CEBPB (ENSSPUG00000018077) #19	ENSSPUG00000018084	PTPN1 (ENSSPUG00000018093) #20	RIPOR3 (ENSSPUG00000018105) #21	PARD6B (ENSSPUG00000018120) #22	BCAS4 (ENSSPUG00000018131)	ADNP (ENSSPUG00000018142) #23	DPM1 (ENSSPUG00000018152) #25	ENSSPUG00000018189 #28	ENSSPUG00000018197 #28	ATP9A (ENSSPUG00000018227) #29	SALL4 (ENSSPUG00000018274) #30	ZFP64 (ENSSPUG00000018286) #31
Episquamata	ANCESTRAL SPECIES	1	ENSGT00940000165342	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Laterata	ANCESTRAL SPECIES	14	ENSGT00940000165342	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00560000078660	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Common wall lizard	MODERN SPECIES	14	KCNB1 (ENSPMRG00000010455) #10	PTGIS (ENSPMRG00000010470) #11	B4GALT5 (ENSPMRG00000010500) #12	SLC9A8 (ENSPMRG00000010512) #13	ENSPMRG00000010522	SPATA2 (ENSPMRG00000010524) #14	RNF114 (ENSPMRG00000010527) #15	SNAI1 (ENSPMRG00000010532) #16	ENSPMRG00000010539	ENSPMRG00000010541	ENSPMRG00000010545	CEBPB (ENSPMRG00000010548) #19	ENSPMRG00000010551	PTPN1 (ENSPMRG00000010556) #20	RIPOR3 (ENSPMRG00000010574) #21	PARD6B (ENSPMRG00000010641) #22	ENSPMRG00000010652	ADNP (ENSPMRG00000010668) #23	DPM1 (ENSPMRG00000010675) #25	MOCS3 (ENSPMRG00000010677) #26	KCNG1 (ENSPMRG00000010687) #27	NFATC2 (ENSPMRG00000010694) #28	ATP9A (ENSPMRG00000010709) #29	ENSPMRG00000010724	SALL4 (ENSPMRG00000010728) #30	ZFP64 (ENSPMRG00000010733) #31	TSHZ2 (ENSPMRG00000010735) #32	ENSPMRG00000010740	ZNF217 (ENSPMRG00000010743) #33	BCAS1 (ENSPMRG00000010750) #34	CYP24A1 (ENSPMRG00000003513) #35
Argentine black and white tegu	MODERN SPECIES	66														PTPN1 (ENSSMRG00000006025) #20	RIPOR3 (ENSSMRG00000006018) #21	PARD6B (ENSSMRG00000005931) #22	BCAS4 (ENSSMRG00000005926)	ADNP (ENSSMRG00000005881) #23	DPM1 (ENSSMRG00000005880) #25	MOCS3 (ENSSMRG00000005879) #26	KCNG1 (ENSSMRG00000005876) #27	ENSSMRG00000005870 #28	ENSSMRG00000005869 #28	ATP9A (ENSSMRG00000005841) #29	SALL4 (ENSSMRG00000005816) #30	ENSSMRG00000005815	ZFP64 (ENSSMRG00000005813) #31	ENSSMRG00000005803	TSHZ2 (ENSSMRG00000005796) #32	ENSSMRG00000005794	ZNF217 (ENSSMRG00000005792) #33
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00940000165342	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00740000115534.a.a	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36	ENSGT00940000160725
Lizard	MODERN SPECIES	840														PTPN1 (ENSACAG00000003763) #20	RIPOR3 (ENSACAG00000003824) #21	PARD6B (ENSACAG00000039885) #22	BCAS4 (ENSACAG00000003909)	ADNP (ENSACAG00000043744) #23	ENSACAG00000040831	DPM1 (ENSACAG00000003927) #25	MOCS3 (ENSACAG00000003931) #26	KCNG1 (ENSACAG00000037992) #27	ENSACAG00000045478	NFATC2 (ENSACAG00000013075) #28	ATP9A (ENSACAG00000012763) #29	SALL4 (ENSACAG00000012748) #30	ZFP64 (ENSACAG00000012706) #31	ENSACAG00000037301	TSHZ2 (ENSACAG00000012691) #32	ENSACAG00000038485	ENSACAG00000038402
Elapidae	ANCESTRAL SPECIES	1	ENSGT00940000157304	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154681.a #16	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230.m #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT01000000217917	ENSGT00950000183051.a.b #32	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Indian cobra	MODERN SPECIES	2	CSE1L (ENSNNAG00000001043)	STAU1 (ENSNNAG00000000957)	ENSNNAG00000000927	KCNB1 (ENSNNAG00000000924) #10	PTGIS (ENSNNAG00000000908) #11	B4GALT5 (ENSNNAG00000000878) #12	ENSNNAG00000000848	SPATA2 (ENSNNAG00000000828) #14	RNF114 (ENSNNAG00000000821) #15	ENSNNAG00000004537 #16	UBE2V1 (ENSNNAG00000004529) #17	ENSNNAG00000004498	CEBPB (ENSNNAG00000004482) #19	PTPN1 (ENSNNAG00000004419) #20	RIPOR3 (ENSNNAG00000004260) #21	PARD6B (ENSNNAG00000004236) #22	BCAS4 (ENSNNAG00000004214)	DPM1 (ENSNNAG00000004101) #25	MOCS3 (ENSNNAG00000004079) #26	KCNG1 (ENSNNAG00000004057) #27	NFATC2 (ENSNNAG00000003856) #28	ATP9A (ENSNNAG00000003775) #29	SALL4 (ENSNNAG00000003718) #30	ZFP64 (ENSNNAG00000003693) #31	ENSNNAG00000003680	ENSNNAG00000003674 #32	ENSNNAG00000003636	ZNF217 (ENSNNAG00000003595) #33	BCAS1 (ENSNNAG00000003553) #34	CYP24A1 (ENSNNAG00000003507) #35	PFDN4 (ENSNNAG00000003493) #36
Elapidae_a	ANCESTRAL SPECIES	3	ENSGT00550000074884	ENSGT00940000157304	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230.m #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT01000000217917	ENSGT00950000183051.a.b #32	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Acanthophiinae	ANCESTRAL SPECIES	2	ENSGT00940000157304	ENSGT00390000008325.b.a	ENSGT00940000154899 #10	ENSGT00940000153709.A #11	ENSGT00940000158019 #12	ENSGT00940000157210 #13	ENSGT01100000263524.B.b.a	ENSGT00530000063956.a #14	ENSGT00950000182909.b.b.a #15	ENSGT00940000154298.a.a.mc	ENSGT00940000158854 #17	ENSGT00940000163703.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00960000190095	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000160847 #26	ENSGT00940000159686 #27	ENSGT00940000156230.m #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT01000000217917	ENSGT00950000183051.a.b #32	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b #35	ENSGT00390000006696 #36
Eastern brown snake	MODERN SPECIES	8	ENSPTXG00000002319	KCNB1 (ENSPTXG00000002318) #10	PTGIS (ENSPTXG00000002316) #11	B4GALT5 (ENSPTXG00000002315) #12	SLC9A8 (ENSPTXG00000002313) #13	ENSPTXG00000002311	SPATA2 (ENSPTXG00000002309) #14	RNF114 (ENSPTXG00000002308) #15	ENSPTXG00000002306 #16	ENSPTXG00000002305	UBE2V1 (ENSPTXG00000002304) #17	ENSPTXG00000002303	CEBPB (ENSPTXG00000002302) #19	PTPN1 (ENSPTXG00000002301) #20	RIPOR3 (ENSPTXG00000002299) #21	PARD6B (ENSPTXG00000002298) #22	ENSPTXG00000002297	ADNP (ENSPTXG00000002296) #23	DPM1 (ENSPTXG00000002295) #25	MOCS3 (ENSPTXG00000002293) #26	KCNG1 (ENSPTXG00000002291) #27	NFATC2 (ENSPTXG00000002280) #28	ATP9A (ENSPTXG00000002278) #29	SALL4 (ENSPTXG00000002277) #30	ZFP64 (ENSPTXG00000002276) #31	ENSPTXG00000002275	TSHZ2 (ENSPTXG00000002274) #32	ZNF217 (ENSPTXG00000002271) #33	ENSPTXG00000002270 #34	CYP24A1 (ENSPTXG00000002267) #35	PFDN4 (ENSPTXG00000002266) #36
Mainland tiger snake	MODERN SPECIES	10	ENSNSUG00000014380	KCNB1 (ENSNSUG00000014379) #10	PTGIS (ENSNSUG00000014378) #11	B4GALT5 (ENSNSUG00000014377) #12	SLC9A8 (ENSNSUG00000014376) #13	ENSNSUG00000014375	SPATA2 (ENSNSUG00000014374) #14	RNF114 (ENSNSUG00000014333) #15	ENSNSUG00000014332 #16	ENSNSUG00000014331	UBE2V1 (ENSNSUG00000014330) #17	ENSNSUG00000014329	CEBPB (ENSNSUG00000014328) #19	PTPN1 (ENSNSUG00000014327) #20	RIPOR3 (ENSNSUG00000014326) #21	PARD6B (ENSNSUG00000014325) #22	ENSNSUG00000014324	ADNP (ENSNSUG00000014323) #23	DPM1 (ENSNSUG00000014321) #25	MOCS3 (ENSNSUG00000014320) #26	KCNG1 (ENSNSUG00000014319) #27	NFATC2 (ENSNSUG00000014316) #28	ATP9A (ENSNSUG00000014315) #29	SALL4 (ENSNSUG00000014314) #30	ZFP64 (ENSNSUG00000014312) #31	ENSNSUG00000014311	TSHZ2 (ENSNSUG00000014310) #32	ZNF217 (ENSNSUG00000014309) #33	ENSNSUG00000014308 #34	CYP24A1 (ENSNSUG00000014307) #35	PFDN4 (ENSNSUG00000014306) #36
Blue-lipped sea krait	MODERN SPECIES	5878																PARD6B (ENSLLTG00000005267) #22	BCAS4 (ENSLLTG00000005276)	ADNP (ENSLLTG00000005281) #23
Anura	ANCESTRAL SPECIES	118								ENSGT00940000158854 #17	ENSGT00940000154681.a #16	ENSGT00950000182909.b.b.a #15	ENSGT00530000063956.a #14	ENSGT01100000263524.B.b.a	ENSGT00940000162137 #19	ENSGT00940000158041 #20	ENSGT00940000153717.a.b #21	ENSGT00950000183211.a.a.a #22	ENSGT00390000006790.a	ENSGT00530000063631.b #23	ENSGT00940000153481.B #25	ENSGT00940000159686 #27	ENSGT00940000156230 #28	ENSGT00940000159181 #29	ENSGT00940000155384.a #30	ENSGT00940000156405 #31	ENSGT00950000183051.a.b #32	ENSGT00940000159884 #33	ENSGT00390000003167 #34	ENSGT00950000182905.b.k #35	ENSGT00390000006696 #36	ENSGT00940000160725	ENSGT00940000159728
Leishan spiny toad	MODERN SPECIES	3	ENSLLEG00000030065	ENSLLEG00000030023	ENSLLEG00000029996	ENSLLEG00000029985	SLC9A8 (ENSLLEG00000029573) #13	ENSLLEG00000029523	B4GALT5 (ENSLLEG00000029463) #12	ENSLLEG00000029437 #16	RNF114 (ENSLLEG00000029414) #15	SPATA2 (ENSLLEG00000029404) #14	ENSLLEG00000029393	CEBPB (ENSLLEG00000029378) #19	ENSLLEG00000029362	PTPN1 (ENSLLEG00000029333) #20	ENSLLEG00000029312 #21	PARD6B (ENSLLEG00000029287) #22	ENSLLEG00000029269	ENSLLEG00000029258	ADNP (ENSLLEG00000029240) #23	DPM1 (ENSLLEG00000029127) #25	KCNG1 (ENSLLEG00000029105) #27	NFATC2 (ENSLLEG00000029049) #28	ATP9A (ENSLLEG00000028745) #29	SALL4 (ENSLLEG00000028680) #30	ZFP64 (ENSLLEG00000028647) #31	ENSLLEG00000028634	ENSLLEG00000028629	ENSLLEG00000028617	ENSLLEG00000028601	TSHZ2 (ENSLLEG00000028593) #32	ZNF217 (ENSLLEG00000028506) #33
Frog	MODERN SPECIES	1	ENSXETG00000041692	sulf2 (ENSXETG00000003484)	ENSXETG00000047933	prex1 (ENSXETG00000024001)	b4galt5 (ENSXETG00000024002) #12	slc9a8 (ENSXETG00000024003) #13	peds1 (ENSXETG00000045606)	ube2v1 (ENSXETG00000040517) #17	snai1 (ENSXETG00000027366) #16	rnf114 (ENSXETG00000049212) #15	spata2 (ENSXETG00000024008) #14	opn7b (ENSXETG00000031228)	cebpb (ENSXETG00000048564) #19	ptpn1 (ENSXETG00000012288) #20	ripor3 (ENSXETG00000012297) #21	pard6b (ENSXETG00000040385) #22	bcas4 (ENSXETG00000040230)	adnp (ENSXETG00000045270) #23	dpm1 (ENSXETG00000012303) #25	kcng1 (ENSXETG00000045918) #27	nfatc2 (ENSXETG00000012311) #28	atp9a (ENSXETG00000012313) #29	sall4 (ENSXETG00000012326) #30	ENSXETG00000041304	zfp64 (ENSXETG00000012327) #31	tshz2 (ENSXETG00000017555) #32	znf217 (ENSXETG00000017550) #33	ENSXETG00000042264	bcas1 (ENSXETG00000035009) #34	cyp24a1 (ENSXETG00000017527) #35	pfdn4 (ENSXETG00000017525)