Gnathostomata	ANCESTRAL SPECIES	40	ENSGT00940000153556.A	ENSGT00940000158170	ENSGT00940000156315	ENSGT00710000106806 #20	ENSGT00390000006837	ENSGT00390000005903	ENSGT00940000157945	ENSGT00940000158317	ENSGT00940000158123	ENSGT00940000157638	ENSGT00950000182835.d.b	ENSGT00790000123099	ENSGT00940000157926	ENSGT01030000235060	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00940000174361	ENSGT00390000001775.B
Euteleostomi	ANCESTRAL SPECIES	41	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT01030000235060	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B
Actinopterygii	ANCESTRAL SPECIES	1	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT01030000235060	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776.d #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00940000155834 #25	ENSGT00940000157129 #26	ENSGT00940000156375	ENSGT00390000009047.b #27	ENSGT00390000008645	ENSGT00940000153110.B
Neopterygii	ANCESTRAL SPECIES	20	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT01030000235060	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776.d #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00940000155834 #25	ENSGT00940000157129 #26	ENSGT00940000156375	ENSGT00390000009047.b #27	ENSGT00390000008645	ENSGT00940000153110.B
Osteoglossocephalai	ANCESTRAL SPECIES	43	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000155461.A ##21	ENSGT00940000156715	ENSGT00940000157926	ENSGT01030000235060	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776.d.b.b ##23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00940000155834 #25	ENSGT00940000157129 #26	ENSGT00940000156375	ENSGT00390000009047.b #27	ENSGT00390000008645	ENSGT00940000154818	ENSGT00940000156615 #28
Clupeocephala	ANCESTRAL SPECIES	542															ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00940000174361
Euteleosteomorpha	ANCESTRAL SPECIES	21	ENSGT00940000154098.a.e #11	ENSGT00940000154098.a.f ##11	ENSGT00390000008708	ENSGT00940000153525.i.a ##12	ENSGT00940000178181	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00940000174361	ENSGT00940000153110.B.f	ENSGT00940000164757	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37	ENSGT00940000158637	ENSGT01020000230401.b.a
Acanthomorphata	ANCESTRAL SPECIES	4	ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37	ENSGT00940000158637
Euacanthomorphacea	ANCESTRAL SPECIES	7	ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37	ENSGT00940000158637
Percomorphaceae	ANCESTRAL SPECIES	4	ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37	ENSGT00940000158637
Percomorphaceae_B	ANCESTRAL SPECIES	5	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Percomorphaceae_C	ANCESTRAL SPECIES	5	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Eupercaria	ANCESTRAL SPECIES	6	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Tetraodontidae	ANCESTRAL SPECIES	11	ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT01100000263518.C	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37	ENSGT00940000158637
Fugu	MODERN SPECIES	21	CNOT4 (ENSTRUG00000016861)	KCNA1 (ENSTRUG00000016864) #7	ENSTRUG00000029325 #8	ENSTRUG00000033461	pthlhb (ENSTRUG00000016866) #10	tmpob (ENSTRUG00000028971) #11	ldhbb (ENSTRUG00000016868) #12	golt1bb (ENSTRUG00000016875) #14	slc35b4 (ENSTRUG00000016876) #15	ENSTRUG00000016881 #16	NET1 (ENSTRUG00000016882) #17	ASB13 (ENSTRUG00000028781) #18	ENSTRUG00000024331 #19	taf3 (ENSTRUG00000016902) #20	CELF2 (ENSTRUG00000016905) #21	dhtkd1 (ENSTRUG00000016922) #22	ENSTRUG00000016926 #23	CDK17 (ENSTRUG00000016933) #25	elk3 (ENSTRUG00000016937) #26	hal (ENSTRUG00000016943) #27	ENSTRUG00000016951	ENSTRUG00000016953 #29	ENSTRUG00000029085 #30	FGD6 (ENSTRUG00000016956) #31	nr2c1 (ENSTRUG00000016957) #32	tmcc3 (ENSTRUG00000016961) #33	ENSTRUG00000016962 #34	FLNC (ENSTRUG00000016964) #35	ENSTRUG00000016975 #36	parietopsin (ENSTRUG00000016978) #37	NT5DC3 (ENSTRUG00000016979)
Tetraodon	MODERN SPECIES	4	ENSTNIG00000015996	bpgm (ENSTNIG00000015997)	ENSTNIG00000015998	ENSTNIG00000000259	zgc:136858 (ENSTNIG00000015999)	CNOT4 (ENSTNIG00000016000)	KCNA1 (ENSTNIG00000016001) #7	pthlhb (ENSTNIG00000016002) #10	tmpob (ENSTNIG00000016003) #11	ldhbb (ENSTNIG00000016004) #12	slc35b4 (ENSTNIG00000016005) #15	NET1 (ENSTNIG00000016006) #17	ASB13 (ENSTNIG00000016007) #18	taf3 (ENSTNIG00000016008) #20	ENSTNIG00000016009 #21	dhtkd1 (ENSTNIG00000016010) #22	CAMK1D (ENSTNIG00000016011) #23	CDK17 (ENSTNIG00000016012) #25	elk3 (ENSTNIG00000016013) #26	hal (ENSTNIG00000016014) #27	NTN4 (ENSTNIG00000016015) #28	ENSTNIG00000016016 #29	ENSTNIG00000016017 #31	nr2c1 (ENSTNIG00000016018) #32	tmcc3 (ENSTNIG00000016019) #33	FLNC (ENSTNIG00000016020) #35	ENSTNIG00000016021 #36	ENSTNIG00000016022 #36	parietopsin (ENSTNIG00000016023) #37	NT5DC3 (ENSTNIG00000016024)	hsp90b1 (ENSTNIG00000016025)
Eupecaria_A	ANCESTRAL SPECIES	7	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Ballan wrasse	MODERN SPECIES	15	CNOT4 (ENSLBEG00000009999)	KCNA1 (ENSLBEG00000010081) #7	ENSLBEG00000010097 #8	ENSLBEG00000010135 #9	pthlhb (ENSLBEG00000010155) #10	tmpob (ENSLBEG00000010183) #11	ldhbb (ENSLBEG00000010213) #12	golt1bb (ENSLBEG00000010261) #14	slc35b4 (ENSLBEG00000010300) #15	NET1 (ENSLBEG00000010330) #17	ASB13 (ENSLBEG00000010349) #18	ENSLBEG00000010411 #19	ENSLBEG00000010478	taf3 (ENSLBEG00000010517) #20	CELF2 (ENSLBEG00000010618) #21	dhtkd1 (ENSLBEG00000010875) #22	camk1db (ENSLBEG00000010981) #23	ucmab (ENSLBEG00000011025) #24	CDK17 (ENSLBEG00000011044) #25	elk3 (ENSLBEG00000011118) #26	hal (ENSLBEG00000011172) #27	NTN4 (ENSLBEG00000011274) #28	ENSLBEG00000011303 #29	FGD6 (ENSLBEG00000011378) #31	nr2c1 (ENSLBEG00000011498) #32	tmcc3 (ENSLBEG00000011530) #33	ENSLBEG00000011564 #34	FLNC (ENSLBEG00000011618) #35	ENSLBEG00000011748 #36	parietopsin (ENSLBEG00000011812) #37	NT5DC3 (ENSLBEG00000011838)
Eupecaria_B	ANCESTRAL SPECIES	7	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Eupecaria_C	ANCESTRAL SPECIES	6	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000164736	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	4	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000164736	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
European seabass	MODERN SPECIES	19	ENSDLAG00005024813	ENSDLAG00005027000 #7	ENSDLAG00005024807	pthlhb (ENSDLAG00005024806) #10	ENSDLAG00005024805 #11	ldhbb (ENSDLAG00005024801) #12	ENSDLAG00005026737 #13	slc35b4 (ENSDLAG00005024790) #15	ENSDLAG00005024797 #14	ENSDLAG00005024786 #16	ENSDLAG00005027271 #17	ENSDLAG00005030538 #18	ENSDLAG00005024668 #19	ENSDLAG00005024663 #20	ENSDLAG00005024582 #21	dhtkd1 (ENSDLAG00005024548) #22	camk1db (ENSDLAG00005024213) #23	ucmab (ENSDLAG00005024188) #24	ENSDLAG00005023500 #25	hal (ENSDLAG00005023289) #27	ELK3 (ENSDLAG00005033254) #26	ENSDLAG00005023281 #28	ENSDLAG00005023245 #29	FGD6 (ENSDLAG00005023189) #31	NR2C1 (ENSDLAG00005023092) #32	TMCC3 (ENSDLAG00005031421) #33	ENSDLAG00005023071 #34	ENSDLAG00005020828 #35	ENSDLAG00005020761 #36	ENSDLAG00005020758 #37	ENSDLAG00005020725
Large yellow croaker	MODERN SPECIES	492	ENSLCRG00005020083 #8	ENSLCRG00005020084	pthlhb (ENSLCRG00005012114) #10	tmpob (ENSLCRG00005012116) #11	ldhbb (ENSLCRG00005012117) #12	ENSLCRG00005012119 #13	golt1bb (ENSLCRG00005012122) #14	ENSLCRG00005012126 ##12	slc35b4 (ENSLCRG00005012164) #15	ENSLCRG00005012168 #16	NET1 (ENSLCRG00005012179) #17	ASB13 (ENSLCRG00005013003) #18	ENSLCRG00005013006 #19	taf3 (ENSLCRG00005013007) #20	CELF2 (ENSLCRG00005013013) #21	dhtkd1 (ENSLCRG00005014070) #22	camk1db (ENSLCRG00005014955) #23	ucmab (ENSLCRG00005016031) #24	CDK17 (ENSLCRG00005016060) #25	elk3 (ENSLCRG00005017457) #26	hal (ENSLCRG00005017471) #27	NTN4 (ENSLCRG00005018974) #28	ENSLCRG00005018978 #29	ENSLCRG00005019046 #30	FGD6 (ENSLCRG00005019056) #31	nr2c1 (ENSLCRG00005019069) #32	tmcc3 (ENSLCRG00005019107) #33	ENSLCRG00005019110 #34	FLNC (ENSLCRG00005019128) #35	ENSLCRG00005019349 #36	parietopsin (ENSLCRG00005019350) #37
Gilthead seabream	MODERN SPECIES	22	zgc:136858 (ENSSAUG00010010549)	CNOT4 (ENSSAUG00010010539)	KCNA1 (ENSSAUG00010010536) #7	ENSSAUG00010010534 #8	PTHrP (ENSSAUG00010010533) #10	tmpob (ENSSAUG00010010532) #11	ldhbb (ENSSAUG00010010530) #12	golt1bb (ENSSAUG00010010527) #14	slc35b4 (ENSSAUG00010010522) #15	ENSSAUG00010010519 #16	NET1 (ENSSAUG00010010076) #17	ASB13 (ENSSAUG00010010064) #18	ENSSAUG00010010062 #19	taf3 (ENSSAUG00010010061) #20	CELF2 (ENSSAUG00010008431) #21	dhtkd1 (ENSSAUG00010007922) #22	camk1db (ENSSAUG00010005958) #23	ucmab (ENSSAUG00010005929) #24	CDK17 (ENSSAUG00010004339) #25	elk3 (ENSSAUG00010004266) #26	hal (ENSSAUG00010004129) #27	NTN4 (ENSSAUG00010023323) #28	ENSSAUG00010023229 #29	ENSSAUG00010023226 #30	FGD6 (ENSSAUG00010023143) #31	nr2c1 (ENSSAUG00010023068) #32	tmcc3 (ENSSAUG00010023062) #33	ENSSAUG00010023061	ENSSAUG00010023056 #34	FLNC (ENSSAUG00010021900) #35	ENSSAUG00010021827
Perciformes	ANCESTRAL SPECIES	7	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Cottioidei	ANCESTRAL SPECIES	6	ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37	ENSGT00940000158637
Lumpfish	MODERN SPECIES	21	zgc:136858 (ENSCLMG00005001925)	CNOT4 (ENSCLMG00005001931)	KCNA1 (ENSCLMG00005001965) #7	ENSCLMG00005001966 #8	pthlhb (ENSCLMG00005001967) #10	tmpob (ENSCLMG00005001968) #11	ldhbb (ENSCLMG00005001969) #12	golt1bb (ENSCLMG00005001976) #14	slc35b4 (ENSCLMG00005001980) #15	ENSCLMG00005001990 #16	NET1 (ENSCLMG00005002008) #17	ASB13 (ENSCLMG00005004906) #18	ENSCLMG00005004909 #19	taf3 (ENSCLMG00005004915) #20	CELF2 (ENSCLMG00005004921) #21	dhtkd1 (ENSCLMG00005004932) #22	camk1db (ENSCLMG00005005775) #23	ucmab (ENSCLMG00005005918) #24	CDK17 (ENSCLMG00005005951) #25	elk3 (ENSCLMG00005009418) #26	hal (ENSCLMG00005009420) #27	NTN4 (ENSCLMG00005009421) #28	ENSCLMG00005009422 #29	FGD6 (ENSCLMG00005009425) #31	nr2c1 (ENSCLMG00005009426) #32	TMCC3 (ENSCLMG00005009536) #33	ENSCLMG00005009538	ENSCLMG00005009541 #35	ENSCLMG00005009544 #36	parietopsin (ENSCLMG00005009546) #37	NT5DC3 (ENSCLMG00005009556)
Stickleback	MODERN SPECIES	14	zgc:136858 (ENSGACG00000004250)	CNOT4 (ENSGACG00000004276)	KCNA1 (ENSGACG00000004302) #7	ENSGACG00000004310 #8	ENSGACG00000004313 #9	pthlhb (ENSGACG00000004317) #10	tmpob (ENSGACG00000004325) #11	ldhbb (ENSGACG00000004329) #12	golt1bb (ENSGACG00000004333) #14	slc35b4 (ENSGACG00000004350) #15	chchd3b (ENSGACG00000004357) #16	NET1 (ENSGACG00000004380) #17	ENSGACG00000004384	taf3 (ENSGACG00000004409) #20	CELF2 (ENSGACG00000004426) #21	dhtkd1 (ENSGACG00000004439) #22	camk1db (ENSGACG00000004485) #23	ucmab (ENSGACG00000004488) #24	CDK17 (ENSGACG00000004498) #25	elk3 (ENSGACG00000004521) #26	hal (ENSGACG00000004528) #27	NTN4 (ENSGACG00000004555) #28	ENSGACG00000004563 #29	usp3 (ENSGACG00000004578)	ENSGACG00000004593	CA12 (ENSGACG00000004596)	MAN2C1 (ENSGACG00000004613)	neil1 (ENSGACG00000004670)	commd4 (ENSGACG00000004675)	sema7a (ENSGACG00000004680)	islr2 (ENSGACG00000004691)
Perciformes_a	ANCESTRAL SPECIES	7	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Pike perch	MODERN SPECIES	6	zgc:136858 (ENSSLUG00000018154)	CNOT4 (ENSSLUG00000018127)	KCNA1 (ENSSLUG00000018123) #7	pthlhb (ENSSLUG00000018119) #10	tmpob (ENSSLUG00000018115) #11	ldhbb (ENSSLUG00000018108) #12	ENSSLUG00000018100 #13	golt1bb (ENSSLUG00000018091) #14	slc35b4 (ENSSLUG00000018079) #15	ENSSLUG00000018072 #16	NET1 (ENSSLUG00000017249) #17	ASB13 (ENSSLUG00000017185) #18	ENSSLUG00000017160 #19	taf3 (ENSSLUG00000017151) #20	CELF2 (ENSSLUG00000017071) #21	dhtkd1 (ENSSLUG00000016767) #22	camk1db (ENSSLUG00000014408) #23	ENSSLUG00000014294	ucmab (ENSSLUG00000014289) #24	CDK17 (ENSSLUG00000012632) #25	elk3 (ENSSLUG00000012565) #26	hal (ENSSLUG00000012245) #27	NTN4 (ENSSLUG00000012220) #28	ENSSLUG00000012149 #29	ENSSLUG00000012131 #30	FGD6 (ENSSLUG00000012125) #31	nr2c1 (ENSSLUG00000011426) #32	tmcc3 (ENSSLUG00000011383) #33	ENSSLUG00000011379 #34	FLNC (ENSSLUG00000009012) #35	ENSSLUG00000008899 #36
Channel bull blenny	MODERN SPECIES	20	CNOT4 (ENSCGOG00000015027)	KCNA1 (ENSCGOG00000015018) #7	ENSCGOG00000015012 #8	ENSCGOG00000015010 #9	pthlhb (ENSCGOG00000015004) #10	tmpob (ENSCGOG00000015003) #11	ldhbb (ENSCGOG00000014963) #12	golt1bb (ENSCGOG00000014935) #14	slc35b4 (ENSCGOG00000014818) #15	ENSCGOG00000014814 #16	NET1 (ENSCGOG00000014282) #17	ASB13 (ENSCGOG00000014265) #18	ENSCGOG00000014250 #19	taf3 (ENSCGOG00000014225) #20	CELF2 (ENSCGOG00000014217) #21	dhtkd1 (ENSCGOG00000013982) #22	camk1db (ENSCGOG00000012275) #23	ucmab (ENSCGOG00000012236) #24	CDK17 (ENSCGOG00000009431) #25	elk3 (ENSCGOG00000009292) #26	hal (ENSCGOG00000009285) #27	NTN4 (ENSCGOG00000009282) #28	ENSCGOG00000008971 #29	FGD6 (ENSCGOG00000008784) #31	nr2c1 (ENSCGOG00000008597) #32	tmcc3 (ENSCGOG00000008588) #33	ENSCGOG00000008574 #34	FLNC (ENSCGOG00000004953) #35	ENSCGOG00000004866 #36	parietopsin (ENSCGOG00000004828) #37	NT5DC3 (ENSCGOG00000003723)
Percomorphaceae_D	ANCESTRAL SPECIES	5	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Carangaria	ANCESTRAL SPECIES	6	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Pleuronectoidei	ANCESTRAL SPECIES		ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37	ENSGT00940000158637
Tongue sole	MODERN SPECIES	16	KCNA1 (ENSCSEG00000015175) #7	KCNA1 (ENSCSEG00000015180) #7	ENSCSEG00000015184 ##8	ENSCSEG00000015191 #9	pthlhb (ENSCSEG00000015200) #10	tmpob (ENSCSEG00000015206) #11	ldhbb (ENSCSEG00000015220) #12	golt1bb (ENSCSEG00000015217) #14	slc35b4 (ENSCSEG00000015228) #15	ENSCSEG00000015245 #16	NET1 (ENSCSEG00000015257) #17	ENSCSEG00000015274	ENSCSEG00000015294 #19	taf3 (ENSCSEG00000015325) #20	CELF2 (ENSCSEG00000015335) #21	dhtkd1 (ENSCSEG00000015356) #22	camk1db (ENSCSEG00000015376) #23	ucmab (ENSCSEG00000015389) #24	CDK17 (ENSCSEG00000015398) #25	elk3 (ENSCSEG00000015413) #26	hal (ENSCSEG00000015434) #27	NTN4 (ENSCSEG00000015470) #28	ENSCSEG00000015493 #29	FGD6 (ENSCSEG00000015505) #31	nr2c1 (ENSCSEG00000015524) #32	tmcc3 (ENSCSEG00000015533) #33	ENSCSEG00000015540
Turbot	MODERN SPECIES	1	ENSSMAG00000008614	ENSSMAG00000008668 #7	ENSSMAG00000037334 #8	ENSSMAG00000008686 #9	pthlhb (ENSSMAG00000008692) #10	tmpob (ENSSMAG00000022767) #11	ldhbb (ENSSMAG00000008730) #12	ENSSMAG00000031141 #13	golt1bb (ENSSMAG00000008750) #14	slc35b4 (ENSSMAG00000008776) #15	ENSSMAG00000008847 #17	ENSSMAG00000008859 #18	ENSSMAG00000008921 #19	ENSSMAG00000008976 #20	ENSSMAG00000008985 #21	dhtkd1 (ENSSMAG00000009022) #22	camk1db (ENSSMAG00000009106) #23	ucmab (ENSSMAG00000009152) #24	CDK17 (ENSSMAG00000009167) #25	ELK3 (ENSSMAG00000009145) #26	hal (ENSSMAG00000009206) #27	ENSSMAG00000009282 #28	ENSSMAG00000009301 #29	FGD6 (ENSSMAG00000009329) #31	NR2C1 (ENSSMAG00000009370) #32	TMCC3 (ENSSMAG00000009419) #33	ENSSMAG00000029429	ENSSMAG00000009476 #35	ENSSMAG00000009730 #36	ENSSMAG00000009754 #37	ENSSMAG00000009771
Carangaria_A	ANCESTRAL SPECIES		ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Seriola	ANCESTRAL SPECIES	5	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Greater amberjack	MODERN SPECIES	86	KCNA1 (ENSSDUG00000022629) #7	ENSSDUG00000022622 #8	ENSSDUG00000022615 #9	pthlhb (ENSSDUG00000022610) #10	tmpob (ENSSDUG00000022606) #11	ldhbb (ENSSDUG00000022601) #12	ENSSDUG00000022596 #13	golt1bb (ENSSDUG00000022595) #14	slc35b4 (ENSSDUG00000022589) #15	ENSSDUG00000022585 #16	NET1 (ENSSDUG00000022574) #17	ASB13 (ENSSDUG00000022567) #18	ENSSDUG00000022550 #19	taf3 (ENSSDUG00000022538) #20	CELF2 (ENSSDUG00000022515) #21	dhtkd1 (ENSSDUG00000022487) #22	camk1db (ENSSDUG00000022465) #23	ucmab (ENSSDUG00000022458) #24	CDK17 (ENSSDUG00000022449) #25	elk3 (ENSSDUG00000022442) #26	hal (ENSSDUG00000022431) #27	NTN4 (ENSSDUG00000022425) #28	ENSSDUG00000022414 #29	ENSSDUG00000022404 #30	FGD6 (ENSSDUG00000022384) #31	nr2c1 (ENSSDUG00000022371) #32	tmcc3 (ENSSDUG00000022359) #33	FLNC (ENSSDUG00000022330) #35	ENSSDUG00000022317 #36	parietopsin (ENSSDUG00000022310) #37	NT5DC3 (ENSSDUG00000022304)
Yellowtail amberjack	MODERN SPECIES	3156				pthlhb (ENSSLDG00000011318) #10	tmpob (ENSSLDG00000011292) #11	ldhbb (ENSSLDG00000011256) #12	ENSSLDG00000011239 #13	golt1bb (ENSSLDG00000011218) #14	slc35b4 (ENSSLDG00000011185) #15	ENSSLDG00000011148 #16	NET1 (ENSSLDG00000011066) #17	ASB13 (ENSSLDG00000011026) #18	ENSSLDG00000011000 #19	taf3 (ENSSLDG00000010968) #20	ENSSLDG00000010918 #21	dhtkd1 (ENSSLDG00000010823) #22	camk1db (ENSSLDG00000010767) #23	ucmab (ENSSLDG00000010754) #24	CDK17 (ENSSLDG00000010679) #25	elk3 (ENSSLDG00000010634) #26	hal (ENSSLDG00000010547) #27	NTN4 (ENSSLDG00000010492) #28	ENSSLDG00000010462 #29	FGD6 (ENSSLDG00000010386) #31	nr2c1 (ENSSLDG00000010306) #32	tmcc3 (ENSSLDG00000010263) #33	ENSSLDG00000010225 #34	FLNC (ENSSLDG00000009996) #35	ENSSLDG00000009905 #36	parietopsin (ENSSLDG00000009880) #37	NT5DC3 (ENSSLDG00000009813)
Barramundi perch	MODERN SPECIES	144	CNOT4 (ENSLCAG00010021275)	KCNA1 (ENSLCAG00010021273) #7	ENSLCAG00010021271 #8	ENSLCAG00010021270	pthlhb (ENSLCAG00010021268) #10	tmpob (ENSLCAG00010021266) #11	ldhbb (ENSLCAG00010021256) #12	golt1bb (ENSLCAG00010021252) #14	slc35b4 (ENSLCAG00010021246) #15	ENSLCAG00010021244 #16	NET1 (ENSLCAG00010021242) #17	ASB13 (ENSLCAG00010021238) #18	ENSLCAG00010021230 #19	taf3 (ENSLCAG00010021221) #20	ENSLCAG00010021152 #21	dhtkd1 (ENSLCAG00010021122) #22	camk1db (ENSLCAG00010021106) #23	ucmab (ENSLCAG00010021100) #24	ENSLCAG00010021079 #25	hal (ENSLCAG00010021059) #27	elk3 (ENSLCAG00010021044) #26	NTN4 (ENSLCAG00010020988) #28	ENSLCAG00010020935 #29	ENSLCAG00010020927 #30	FGD6 (ENSLCAG00010020917) #31	nr2c1 (ENSLCAG00010020899) #32	tmcc3 (ENSLCAG00010020893) #33	ENSLCAG00010020890 #34	FLNC (ENSLCAG00010020869) #35	ENSLCAG00010020863 #36	parietopsin (ENSLCAG00010020859) #37
Anabantaria	ANCESTRAL SPECIES	5	ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Zig-zag eel	MODERN SPECIES	20	ENSMAMG00000023194	ENSMAMG00000023195 #7	ENSMAMG00000023196 #8	pthlhb (ENSMAMG00000023197) #10	tmpob (ENSMAMG00000023198) #11	ldhbb (ENSMAMG00000023199) #12	ENSMAMG00000023200 #13	golt1bb (ENSMAMG00000023201) #14	slc35b4 (ENSMAMG00000023202) #15	chchd3b (ENSMAMG00000023203) #16	ENSMAMG00000023204 #17	ENSMAMG00000023205 #18	ENSMAMG00000023206 #19	ENSMAMG00000023207 #20	ENSMAMG00000023208 #21	dhtkd1 (ENSMAMG00000023209) #22	camk1db (ENSMAMG00000023210) #23	ucmab (ENSMAMG00000023211) #24	CDK17 (ENSMAMG00000023212) #25	ELK3 (ENSMAMG00000023213) #26	hal (ENSMAMG00000023214) #27	ENSMAMG00000023215 #28	ENSMAMG00000023216 #29	FGD6 (ENSMAMG00000025780) #31	NR2C1 (ENSMAMG00000023217) #32	TMCC3 (ENSMAMG00000023218) #33	ENSMAMG00000023219 #34	ENSMAMG00000023220 #35	ENSMAMG00000023221 #36	ENSMAMG00000023223 #37	ENSMAMG00000023224
Anabantoidei	ANCESTRAL SPECIES	5	ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Climbing perch	MODERN SPECIES	19	ENSATEG00000017580	ENSATEG00000017560 #7	ENSATEG00000017517 #8	pthlhb (ENSATEG00000017497) #10	tmpob (ENSATEG00000017483) #11	ldhbb (ENSATEG00000017453) #12	ENSATEG00000028717 #13	golt1bb (ENSATEG00000017434) #14	slc35b4 (ENSATEG00000017404) #15	chchd3b (ENSATEG00000017382) #16	ENSATEG00000017353 #17	ENSATEG00000017329 #18	ENSATEG00000017254 #19	ENSATEG00000017216 #20	ENSATEG00000017169 #21	dhtkd1 (ENSATEG00000017124) #22	camk1db (ENSATEG00000017083) #23	ucmab (ENSATEG00000026337) #24	CDK17 (ENSATEG00000017005) #25	ELK3 (ENSATEG00000016983) #26	hal (ENSATEG00000016916) #27	ENSATEG00000016863 #28	ENSATEG00000016815 #29	ENSATEG00000029319 #30	FGD6 (ENSATEG00000016801) #31	NR2C1 (ENSATEG00000016756) #32	TMCC3 (ENSATEG00000016745) #33	ENSATEG00000016736 #34	ENSATEG00000016620 #35	ENSATEG00000016594 #36	ENSATEG00000016565 #37
Siamese fighting fish	MODERN SPECIES	17	CNOT4 (ENSBSLG00000020482)	KCNA1 (ENSBSLG00000020481) #7	ENSBSLG00000020479 #8	pthlhb (ENSBSLG00000020476) #10	tmpob (ENSBSLG00000020475) #11	ldhbb (ENSBSLG00000020458) #12	ENSBSLG00000020456 #13	golt1bb (ENSBSLG00000020450) #14	slc35b4 (ENSBSLG00000020433) #15	ENSBSLG00000020430 #16	NET1 (ENSBSLG00000020297) #17	ASB13 (ENSBSLG00000020278) #18	ENSBSLG00000020231 #19	taf3 (ENSBSLG00000020218) #20	ENSBSLG00000019755 #21	dhtkd1 (ENSBSLG00000019355) #22	camk1db (ENSBSLG00000019196) #23	ucmab (ENSBSLG00000019179) #24	CDK17 (ENSBSLG00000018827) #25	elk3 (ENSBSLG00000018591) #26	hal (ENSBSLG00000017437) #27	NTN4 (ENSBSLG00000017361) #28	ENSBSLG00000017303 #29	FGD6 (ENSBSLG00000017232) #31	nr2c1 (ENSBSLG00000016765) #32	tmcc3 (ENSBSLG00000016641) #33	ENSBSLG00000015981 #34	FLNC (ENSBSLG00000013552) #35	ENSBSLG00000013050 #36	ENSBSLG00000012819	parietopsin (ENSBSLG00000012804) #37
Ovalentaria	ANCESTRAL SPECIES	7	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000164988
Ovalentaria_B	ANCESTRAL SPECIES	3	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000164988
Cichlidae	ANCESTRAL SPECIES	5	ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000164988
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000164988
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000164988	ENSGT01100000263502.A.b.b #37
Haplochromini	ANCESTRAL SPECIES		ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000164988	ENSGT01100000263502.A.b.b #37
Haplochromini_A	ANCESTRAL SPECIES	1	ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000179695	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000164988
Haplochromini_B	ANCESTRAL SPECIES	20	ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000179695	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000164988
Eastern happy	MODERN SPECIES	19	KCNA1 (ENSACLG00000002552) #7	ENSACLG00000002561 #8	ENSACLG00000002585	pthlhb (ENSACLG00000002618) #10	tmpob (ENSACLG00000002624) #11	ldhbb (ENSACLG00000002635) #12	golt1bb (ENSACLG00000002654) #14	slc35b4 (ENSACLG00000002691) #15	ENSACLG00000002767 #16	NET1 (ENSACLG00000002788) #17	ASB13 (ENSACLG00000002808) #18	ENSACLG00000002922 #19	ENSACLG00000003054	taf3 (ENSACLG00000003059) #20	CELF2 (ENSACLG00000003085) #21	dhtkd1 (ENSACLG00000003133) #22	camk1db (ENSACLG00000003189) #23	ucmab (ENSACLG00000003214) #24	CDK17 (ENSACLG00000003240) #25	elk3 (ENSACLG00000003309) #26	hal (ENSACLG00000003338) #27	NTN4 (ENSACLG00000003434) #28	ENSACLG00000003520 #29	FGD6 (ENSACLG00000004184) #31	ENSACLG00000004217	nr2c1 (ENSACLG00000004287) #32	tmcc3 (ENSACLG00000004348) #33	ENSACLG00000004372 #34	FLNC (ENSACLG00000004401) #35	ENSACLG00000004537 #36	ENSACLG00000004580
Zebra mbuna	MODERN SPECIES	1110	KCNA1 (ENSMZEG00005007277) #7	ENSMZEG00005007273 #8	ENSMZEG00005007266 #9	pthlhb (ENSMZEG00005007256) #10	tmpob (ENSMZEG00005007239) #11	ldhbb (ENSMZEG00005007213) #12	golt1bb (ENSMZEG00005007199) #14	slc35b4 (ENSMZEG00005007167) #15	chchd3b (ENSMZEG00005007147) #16	NET1 (ENSMZEG00005007131) #17	ASB13 (ENSMZEG00005007096) #18	ENSMZEG00005007078	ENSMZEG00005007002 #19	taf3 (ENSMZEG00005006990) #20	CELF2 (ENSMZEG00005006950) #21	dhtkd1 (ENSMZEG00005006901) #22	camk1db (ENSMZEG00005006862) #23	ucmab (ENSMZEG00005006830) #24	CDK17 (ENSMZEG00005006744) #25	elk3 (ENSMZEG00005006726) #26	hal (ENSMZEG00005006684) #27	NTN4 (ENSMZEG00005006663) #28	metap2a (ENSMZEG00005006651) #29	ENSMZEG00005006598	ENSMZEG00005006551 #31	nr2c1 (ENSMZEG00005006503) #32	tmcc3 (ENSMZEG00005006496) #33	ENSMZEG00005006481 #34	FLNC (ENSMZEG00005006267) #35	ENSMZEG00005006211	ENSMZEG00005006178 #36
P. nyererei	MODERN SPECIES	322	ENSPNYG00000004344	zgc:136858 (ENSPNYG00000004314)	CNOT4 (ENSPNYG00000004276)	KCNA1 (ENSPNYG00000004255) #7	ENSPNYG00000004251 #8	pthlhb (ENSPNYG00000004239) #10	tmpob (ENSPNYG00000004229) #11	ldhbb (ENSPNYG00000002953) #12	golt1bb (ENSPNYG00000002882) #14	slc35b4 (ENSPNYG00000002843) #15	NET1 (ENSPNYG00000002745) #17	ENSPNYG00000002707	ENSPNYG00000002636 #19	taf3 (ENSPNYG00000002619) #20	ENSPNYG00000002565 #21	dhtkd1 (ENSPNYG00000002505) #22	camk1db (ENSPNYG00000002468) #23	ENSPNYG00000002450	CDK17 (ENSPNYG00000002270) #25	elk3 (ENSPNYG00000002239) #26	hal (ENSPNYG00000002173) #27	NTN4 (ENSPNYG00000002094) #28	ENSPNYG00000001886 #29	ENSPNYG00000001847	FGD6 (ENSPNYG00000001773) #31	nr2c1 (ENSPNYG00000001713) #32	tmcc3 (ENSPNYG00000001671) #33	ENSPNYG00000001647 #34	FLNC (ENSPNYG00000001480) #35	ENSPNYG00000001455 #36	ENSPNYG00000001444
Burton s mouthbrooder	MODERN SPECIES	372											NET1 (ENSHBUG00000005876) #17	ASB13 (ENSHBUG00000005861) #18	ENSHBUG00000005821 #19	taf3 (ENSHBUG00000005738) #20	CELF2 (ENSHBUG00000005718) #21	dhtkd1 (ENSHBUG00000005688) #22	camk1db (ENSHBUG00000005639) #23	ucmab (ENSHBUG00000005610) #24	CDK17 (ENSHBUG00000005602) #25	elk3 (ENSHBUG00000005582) #26	hal (ENSHBUG00000005550) #27	NTN4 (ENSHBUG00000005473) #28	ENSHBUG00000005442 #29	FGD6 (ENSHBUG00000000136) #31	nr2c1 (ENSHBUG00000005414) #32	tmcc3 (ENSHBUG00000005351) #33	ENSHBUG00000005332 #34	FLNC (ENSHBUG00000005296) #35	ENSHBUG00000005212 #36	parietopsin (ENSHBUG00000005174) #37	NT5DC3 (ENSHBUG00000005139)
Lyretail cichlid	MODERN SPECIES	293	CNOT4 (ENSNBRG00000021144)	KCNA1 (ENSNBRG00000021172) #7	ENSNBRG00000021177 #8	ENSNBRG00000021178 #9	pthlhb (ENSNBRG00000021185) #10	tmpob (ENSNBRG00000021195) #11	ldhbb (ENSNBRG00000021207) #12	golt1bb (ENSNBRG00000021222) #14	slc35b4 (ENSNBRG00000021280) #15	ENSNBRG00000021304	NET1 (ENSNBRG00000021333) #17	ASB13 (ENSNBRG00000021390) #18	ENSNBRG00000021416 #19	taf3 (ENSNBRG00000000296) #20	CELF2 (ENSNBRG00000000322) #21	dhtkd1 (ENSNBRG00000000369) #22	camk1db (ENSNBRG00000000417) #23	ucmab (ENSNBRG00000000463) #24	CDK17 (ENSNBRG00000000488) #25	elk3 (ENSNBRG00000000544) #26	hal (ENSNBRG00000000566) #27	NTN4 (ENSNBRG00000000644) #28	ENSNBRG00000000711 #29	nr2c1 (ENSNBRG00000000757) #32	tmcc3 (ENSNBRG00000000817) #33	ENSNBRG00000000821 #34	FLNC (ENSNBRG00000000849) #35	ENSNBRG00000001024 #36	parietopsin (ENSNBRG00000001046) #37	NT5DC3 (ENSNBRG00000001091)	hsp90b1 (ENSNBRG00000001148)
Nile tilapia	MODERN SPECIES	19	zgc:136858 (ENSONIG00000008662)	CNOT4 (ENSONIG00000008656)	ENSONIG00000021090 #8	ENSONIG00000021089 #9	pthlhb (ENSONIG00000042695) #10	tmpob (ENSONIG00000032413) #11	ldhbb (ENSONIG00000008643) #12	golt1bb (ENSONIG00000008642) #14	slc35b4 (ENSONIG00000030209) #15	chchd3b (ENSONIG00000028078) #16	NET1 (ENSONIG00000008633) #17	ASB13 (ENSONIG00000008630) #18	ENSONIG00000038590 #19	taf3 (ENSONIG00000008628) #20	CELF2 (ENSONIG00000008624) #21	dhtkd1 (ENSONIG00000008620) #22	camk1db (ENSONIG00000008609) #23	ucmab (ENSONIG00000008606) #24	CDK17 (ENSONIG00000008599) #25	elk3 (ENSONIG00000008595) #26	hal (ENSONIG00000008586) #27	NTN4 (ENSONIG00000008581) #28	ENSONIG00000042951 #29	ENSONIG00000040874 #30	FGD6 (ENSONIG00000008572) #31	ENSONIG00000041455	nr2c1 (ENSONIG00000008566) #32	tmcc3 (ENSONIG00000037000) #33	ENSONIG00000008561 #34	FLNC (ENSONIG00000008549) #35	ENSONIG00000008547 #36
Midas cichlid	MODERN SPECIES	775	nono (ENSACIG00000019987)	pold2 (ENSACIG00000019972)	ENSACIG00000019725	ELMOD3 (ENSACIG00000019662)	star (ENSACIG00000019649)	ENSACIG00000019612	lsm1 (ENSACIG00000019593)	bag4 (ENSACIG00000019577)	DUSP26 (ENSACIG00000019564)	ENSACIG00000019551	NET1 (ENSACIG00000019531) #17	ASB13 (ENSACIG00000019504) #18	ENSACIG00000019430 #19	taf3 (ENSACIG00000019422) #20	CELF2 (ENSACIG00000019405) #21	dhtkd1 (ENSACIG00000019377) #22	camk1db (ENSACIG00000019344) #23	ucmab (ENSACIG00000019335) #24	CDK17 (ENSACIG00000019321) #25	elk3 (ENSACIG00000019311) #26	hal (ENSACIG00000019291) #27	NTN4 (ENSACIG00000019270) #28	ENSACIG00000019253 #29	FGD6 (ENSACIG00000019200) #31	nr2c1 (ENSACIG00000019177) #32	tmcc3 (ENSACIG00000019166) #33	FLNC (ENSACIG00000019099) #35	ENSACIG00000019088 #36	parietopsin (ENSACIG00000019059) #37	NT5DC3 (ENSACIG00000019036)	hsp90b1 (ENSACIG00000019012)
Pomacentridae	ANCESTRAL SPECIES	1	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Pomacentridae_A	ANCESTRAL SPECIES	9	ENSGT00940000164299.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000162649.f.b.d	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Amphiprion	ANCESTRAL SPECIES	4	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000162649.f.b.d.d	ENSGT00940000162649.f.b.d.c	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37
Clown anemonefish	MODERN SPECIES	686	pthlhb (ENSAOCG00000001578) #10	tmpob (ENSAOCG00000021618) #11	ENSAOCG00000021634	ENSAOCG00000021659	ldhbb (ENSAOCG00000021688) #12	ENSAOCG00000021705	ENSAOCG00000021717 #13	golt1bb (ENSAOCG00000021734) #14	slc35b4 (ENSAOCG00000021808) #15	ENSAOCG00000021821 #16	NET1 (ENSAOCG00000021860) #17	ASB13 (ENSAOCG00000021904) #18	ENSAOCG00000022012 #19	taf3 (ENSAOCG00000022052) #20	ENSAOCG00000022110 #21	dhtkd1 (ENSAOCG00000022201) #22	camk1db (ENSAOCG00000022243) #23	ucmab (ENSAOCG00000001619) #24	CDK17 (ENSAOCG00000002378) #25	elk3 (ENSAOCG00000022341) #26	hal (ENSAOCG00000022421) #27
Orange clownfish	MODERN SPECIES	18	tmpob (ENSAPEG00000004590) #11	ENSAPEG00000004069	ENSAPEG00000003879	ldhbb (ENSAPEG00000003841) #12	ENSAPEG00000003666	ENSAPEG00000003636	ENSAPEG00000003598 #13	golt1bb (ENSAPEG00000003576) #14	slc35b4 (ENSAPEG00000003547) #15	ENSAPEG00000003531 #16	NET1 (ENSAPEG00000003520) #17	ASB13 (ENSAPEG00000003486) #18	ENSAPEG00000003407 #19	taf3 (ENSAPEG00000003384) #20	ENSAPEG00000003362 #21	dhtkd1 (ENSAPEG00000003286) #22	camk1db (ENSAPEG00000003225) #23	ucmab (ENSAPEG00000003214) #24	CDK17 (ENSAPEG00000003139) #25	elk3 (ENSAPEG00000003108) #26	hal (ENSAPEG00000003002) #27	NTN4 (ENSAPEG00000002975) #28	ENSAPEG00000002926 #29	FGD6 (ENSAPEG00000002847) #31	nr2c1 (ENSAPEG00000002804) #32	tmcc3 (ENSAPEG00000002771) #33	ENSAPEG00000002736 #34	FLNC (ENSAPEG00000002601) #35	ENSAPEG00000002559 #36	parietopsin (ENSAPEG00000002525) #37	NT5DC3 (ENSAPEG00000002463)
Spiny chromis	MODERN SPECIES	1285														taf3 (ENSAPOG00000008545) #20	ENSAPOG00000008530 #21	dhtkd1 (ENSAPOG00000008486) #22	camk1db (ENSAPOG00000008429) #23	ucmab (ENSAPOG00000008382) #24	CDK17 (ENSAPOG00000008372) #25	elk3 (ENSAPOG00000008354) #26	hal (ENSAPOG00000008337) #27	NTN4 (ENSAPOG00000008236) #28
Bicolor damselfish	MODERN SPECIES	539													taf3 (ENSSPAG00000005681) #20	ENSSPAG00000005647 #21	ENSSPAG00000005632	dhtkd1 (ENSSPAG00000005584) #22	camk1db (ENSSPAG00000005559) #23	ucmab (ENSSPAG00000005552) #24	CDK17 (ENSSPAG00000005501) #25	elk3 (ENSSPAG00000005477) #26	hal (ENSSPAG00000005437) #27	NTN4 (ENSSPAG00000005418) #28	ENSSPAG00000005386 #29	FGD6 (ENSSPAG00000005362) #31	nr2c1 (ENSSPAG00000005336) #32	tmcc3 (ENSSPAG00000005308) #33	ENSSPAG00000005259 #34	FLNC (ENSSPAG00000004974) #35	ENSSPAG00000004913 #36	parietopsin (ENSSPAG00000004893) #37	NT5DC3 (ENSSPAG00000004854)
Atherinomorphae	ANCESTRAL SPECIES	5	ENSGT00940000164299.b.b #8	ENSGT00940000164736	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000164988	ENSGT01100000263502.A.b.b #37
Oryzias	ANCESTRAL SPECIES	16	ENSGT00940000164299.b.b #8	ENSGT00940000164736	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000164988	ENSGT00390000009609
Oryzias_b	ANCESTRAL SPECIES		ENSGT00940000164299.b.b #8	ENSGT00940000164736	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00940000177912 #13	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00390000009609	ENSGT00940000158637
Javanese ricefish	MODERN SPECIES	20	ENSOJAG00000000271 #8	pthlhb (ENSOJAG00000000274) #10	tmpob (ENSOJAG00000000281) #11	ldhbb (ENSOJAG00000000294) #12	ENSOJAG00000000303 #13	golt1bb (ENSOJAG00000000317) #14	ENSOJAG00000000331	slc35b4 (ENSOJAG00000000339) #15	chchd3b (ENSOJAG00000000345) #16	NET1 (ENSOJAG00000000422) #17	ASB13 (ENSOJAG00000000509) #18	ENSOJAG00000000519 #19	ENSOJAG00000000543	taf3 (ENSOJAG00000000551) #20	CELF2 (ENSOJAG00000000606) #21	dhtkd1 (ENSOJAG00000000701) #22	camk1db (ENSOJAG00000000859) #23	ucmab (ENSOJAG00000001108) #24	CDK17 (ENSOJAG00000001260) #25	elk3 (ENSOJAG00000001712) #26	hal (ENSOJAG00000001751) #27	NTN4 (ENSOJAG00000001787) #28	METAP2 (ENSOJAG00000001805) #29	FGD6 (ENSOJAG00000001856) #31	nr2c1 (ENSOJAG00000001906) #32	tmcc3 (ENSOJAG00000002050) #33	ENSOJAG00000002076 #34	ENSOJAG00000002396 #36	NT5DC3 (ENSOJAG00000002638)	hsp90b1 (ENSOJAG00000003367)	PRKAR2B (ENSOJAG00000004869)
Indian medaka	MODERN SPECIES	15	zgc:136858 (ENSOMEG00000011025)	CNOT4 (ENSOMEG00000011084)	KCNA1 (ENSOMEG00000011109) #7	ENSOMEG00000011129 #8	ENSOMEG00000011146	pthlhb (ENSOMEG00000011153) #10	tmpob (ENSOMEG00000011188) #11	ldhbb (ENSOMEG00000011239) #12	slc35b4 (ENSOMEG00000011299) #15	chchd3b (ENSOMEG00000011347) #16	NET1 (ENSOMEG00000011397) #17	ASB13 (ENSOMEG00000011447) #18	ENSOMEG00000011532 #19	taf3 (ENSOMEG00000011560) #20	CELF2 (ENSOMEG00000000277) #21	dhtkd1 (ENSOMEG00000011851) #22	camk1db (ENSOMEG00000011942) #23	ucmab (ENSOMEG00000011956) #24	CDK17 (ENSOMEG00000012073) #25	elk3 (ENSOMEG00000000296) #26	hal (ENSOMEG00000012162) #27	ENSOMEG00000012191 #28	ENSOMEG00000012223 #29	FGD6 (ENSOMEG00000012279) #31	nr2c1 (ENSOMEG00000012344) #32	tmcc3 (ENSOMEG00000012371) #33	ENSOMEG00000012413 #34	FLNC (ENSOMEG00000012486) #35	ENSOMEG00000012553 #36	ENSOMEG00000001004	NT5DC3 (ENSOMEG00000000323)
Oryzias_a	ANCESTRAL SPECIES	1	ENSGT00390000007427	ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000165059.B.a	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000179681	ENSGT00940000158637
Japanese Medaka HdrR	MODERN SPECIES	20	ENSORLG00000003735 #7	ENSORLG00000003738 #8	ENSORLG00000003741	pthlhb (ENSORLG00000025229) #10	tmpob (ENSORLG00000003751) #11	ldhbb (ENSORLG00000022136) #12	ENSORLG00000023935	golt1bb (ENSORLG00000003792) #14	slc35b4 (ENSORLG00000003802) #15	chchd3b (ENSORLG00000003836) #16	ENSORLG00000003844 #17	ENSORLG00000003855	ENSORLG00000022050 #19	taf3 (ENSORLG00000003878) #20	ENSORLG00000003894 #21	dhtkd1 (ENSORLG00000003925) #22	camk1db (ENSORLG00000003942) #23	ucmab (ENSORLG00000003954) #24	CDK17 (ENSORLG00000004015) #25	elk3 (ENSORLG00000004030) #26	hal (ENSORLG00000004075) #27	ENSORLG00000004087 #28	ENSORLG00000027162 #29	FGD6 (ENSORLG00000004093) #31	nr2c1 (ENSORLG00000004114) #32	TMCC3 (ENSORLG00000004122) #33	ENSORLG00000004131 #34	flnc (ENSORLG00000004247) #35	ENSORLG00000004270 #36	ENSORLG00000029958	NT5DC3 (ENSORLG00000004304)
Chinese medaka	MODERN SPECIES	766	ENSOSIG00000016725	zgc:136858 (ENSOSIG00000016721)	CNOT4 (ENSOSIG00000016695)	KCNA1 (ENSOSIG00000016691) #7	ENSOSIG00000016690 #8	pthlhb (ENSOSIG00000016689) #10	tmpob (ENSOSIG00000016688) #11	ldhbb (ENSOSIG00000016681) #12	slc35b4 (ENSOSIG00000016673) #15	chchd3b (ENSOSIG00000016670) #16	NET1 (ENSOSIG00000014457) #17	ENSOSIG00000014445	ENSOSIG00000014442 #19	taf3 (ENSOSIG00000014441) #20	ENSOSIG00000014185 #21	dhtkd1 (ENSOSIG00000014180) #22	camk1db (ENSOSIG00000013772) #23	ucmab (ENSOSIG00000013757) #24	CDK17 (ENSOSIG00000011158) #25	elk3 (ENSOSIG00000011142) #26	hal (ENSOSIG00000011141) #27	ENSOSIG00000011138 #28	ENSOSIG00000011136 #29	FGD6 (ENSOSIG00000011131) #31	nr2c1 (ENSOSIG00000011085) #32	tmcc3 (ENSOSIG00000011081) #33	ENSOSIG00000011080 #34	FLNC (ENSOSIG00000010344) #35	ENSOSIG00000010331 #36	ENSOSIG00000010329	NT5DC3 (ENSOSIG00000009751)
Cyprinodontiformes	ANCESTRAL SPECIES	6	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000164736	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000164988	ENSGT01100000263502.A.b.b #37
Cyprinodontoidei	ANCESTRAL SPECIES	7	ENSGT00940000164299.b.b #8	ENSGT00940000164736	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT01050000248182	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000164988	ENSGT01100000263502.A.b.b #37
NAME_4	ANCESTRAL SPECIES	26	ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT01050000248182	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT01100000263502.A.b.b #37	ENSGT00940000158637
Mummichog	MODERN SPECIES	2447	zgc:136858 (ENSFHEG00000006533)	CNOT4 (ENSFHEG00000006608)	KCNA1 (ENSFHEG00000006686) #7	ENSFHEG00000006696 #8	pthlhb (ENSFHEG00000006716) #10	tmpob (ENSFHEG00000006728) #11	ldhbb (ENSFHEG00000006831) #12	golt1bb (ENSFHEG00000006866) #14	slc35b4 (ENSFHEG00000006897) #15	chchd3b (ENSFHEG00000006911) #16	NET1 (ENSFHEG00000006961) #17	ASB13 (ENSFHEG00000006982) #18	ENSFHEG00000007086 #19	taf3 (ENSFHEG00000007097) #20	CELF2 (ENSFHEG00000007136) #21	dhtkd1 (ENSFHEG00000007200) #22	camk1db (ENSFHEG00000007245) #23	ucmab (ENSFHEG00000007248) #24	CDK17 (ENSFHEG00000007275) #25	elk3 (ENSFHEG00000007293) #26	hal (ENSFHEG00000007436) #27	NTN4 (ENSFHEG00000007555) #28	metap2a (ENSFHEG00000007589) #29	nr2c1 (ENSFHEG00000007642) #32	tmcc3 (ENSFHEG00000007653) #33	ENSFHEG00000007676 #34	FLNC (ENSFHEG00000007823) #35	ENSFHEG00000007849 #36	parietopsin (ENSFHEG00000007890) #37	NT5DC3 (ENSFHEG00000007940)	hsp90b1 (ENSFHEG00000007987)
Sheepshead minnow	MODERN SPECIES	632	zgc:136858 (ENSCVAG00000009439)	CNOT4 (ENSCVAG00000009399)	KCNA1 (ENSCVAG00000009347) #7	ENSCVAG00000009343 #8	pthlhb (ENSCVAG00000009336) #10	tmpob (ENSCVAG00000009330) #11	ldhbb (ENSCVAG00000009309) #12	ENSCVAG00000009288	golt1bb (ENSCVAG00000009272) #14	slc35b4 (ENSCVAG00000009266) #15	NET1 (ENSCVAG00000009213) #17	ENSCVAG00000009208	ENSCVAG00000000260 #19	taf3 (ENSCVAG00000009106) #20	CELF2 (ENSCVAG00000009088) #21	dhtkd1 (ENSCVAG00000009032) #22	ENSCVAG00000008904 #23	ucmab (ENSCVAG00000008885) #24
Poeciliinae	ANCESTRAL SPECIES	3	ENSGT00940000164299.b.b #8	ENSGT00940000164736	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT01050000248182	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000165059.B.a	ENSGT00530000063735.b #19	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000164988	ENSGT01100000263502.A.b.b #37
Poecilia	ANCESTRAL SPECIES	5	ENSGT00940000164299.b.b #8	ENSGT00940000164736	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT01050000248182	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000165059.B.a	ENSGT00530000063735.b #19	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000164988	ENSGT01100000263502.A.b.b #37
NAME_6	ANCESTRAL SPECIES	31	ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000164736	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000165059.B.a	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000164988	ENSGT01100000263502.A.b.b #37
Sailfin molly	MODERN SPECIES	175				pthlhb (ENSPLAG00000018808) #10	tmpob (ENSPLAG00000018824) #11	ldhbb (ENSPLAG00000021395) #12	ENSPLAG00000021484	golt1bb (ENSPLAG00000021490) #14	slc35b4 (ENSPLAG00000021526) #15	chchd3b (ENSPLAG00000021530) #16	NET1 (ENSPLAG00000021536) #17	ENSPLAG00000021554	ENSPLAG00000021559 #19	taf3 (ENSPLAG00000021566) #20	CELF2 (ENSPLAG00000021601) #21	dhtkd1 (ENSPLAG00000021623) #22	camk1db (ENSPLAG00000021640) #23	ucmab (ENSPLAG00000021648) #24	CDK17 (ENSPLAG00000021676) #25	elk3 (ENSPLAG00000021682) #26	hal (ENSPLAG00000021722) #27	NTN4 (ENSPLAG00000021727) #28	ENSPLAG00000021752 #29	ENSPLAG00000021759 #31
Amazon molly	MODERN SPECIES	655												ENSPFOG00000013252	ENSPFOG00000013205 #19	taf3 (ENSPFOG00000013168) #20	CELF2 (ENSPFOG00000013076) #21	dhtkd1 (ENSPFOG00000012901) #22	camk1db (ENSPFOG00000012864) #23	ucmab (ENSPFOG00000012847) #24	CDK17 (ENSPFOG00000012544) #25	elk3 (ENSPFOG00000012473) #26	hal (ENSPFOG00000012377) #27	NTN4 (ENSPFOG00000012291) #28	ENSPFOG00000012168 #29	FGD6 (ENSPFOG00000012107) #31	nr2c1 (ENSPFOG00000012037) #32	tmcc3 (ENSPFOG00000012011) #33	ENSPFOG00000012007 #34	FLNC (ENSPFOG00000011440) #35	ENSPFOG00000021885 #36
Platyfish	MODERN SPECIES	11	KCNA1 (ENSXMAG00000019897) #7	ENSXMAG00000019895 #8	ENSXMAG00000016904	pthlhb (ENSXMAG00000016979) #10	tmpob (ENSXMAG00000016975) #11	ENSXMAG00000029981 #13	ldhbb (ENSXMAG00000016966) #12	golt1bb (ENSXMAG00000016953) #14	slc35b4 (ENSXMAG00000016942) #15	chchd3b (ENSXMAG00000016927) #16	NET1 (ENSXMAG00000016906) #17	ENSXMAG00000016891	ENSXMAG00000026792 #19	taf3 (ENSXMAG00000016881) #20	CELF2 (ENSXMAG00000016859) #21	dhtkd1 (ENSXMAG00000016835) #22	camk1db (ENSXMAG00000026212) #23	ucmab (ENSXMAG00000016795) #24	CDK17 (ENSXMAG00000016770) #25	elk3 (ENSXMAG00000016767) #26	hal (ENSXMAG00000016734) #27	NTN4 (ENSXMAG00000016726) #28	ENSXMAG00000016695 #29	FGD6 (ENSXMAG00000016684) #31	nr2c1 (ENSXMAG00000016651) #32	tmcc3 (ENSXMAG00000016644) #33	ENSXMAG00000016643 #34	FLNC (ENSXMAG00000016525) #35	ENSXMAG00000016505 #36	ENSXMAG00000026933	parietopsin (ENSXMAG00000028800) #37
Aplocheiloidei	ANCESTRAL SPECIES	1	ENSGT00390000000068.a.b	ENSGT00940000158576.a.b #7	ENSGT00940000164299.b.b #8	ENSGT00940000164736	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00710000106806 #20	ENSGT00940000155461.E.o #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36	ENSGT00940000158637	ENSGT01020000230401.b.a	ENSGT00940000158160
Turquoise killifish	MODERN SPECIES	1622	CNOT4 (ENSNFUG00015022672)	KCNA1 (ENSNFUG00015022665) #7	ENSNFUG00015022664 #8	PTHLH (ENSNFUG00015022661) #10	TMPOB (ENSNFUG00015022658) #11	LDHB (ENSNFUG00015022653) #12	GOLT1BB (ENSNFUG00015022644) #14	ENSNFUG00015022635	slc35b4 (ENSNFUG00015022625) #15	ENSNFUG00015022628 #16	NET1 (ENSNFUG00015022497) #17	ASB13 (ENSNFUG00015022477) #18	ENSNFUG00015022472 #19	TAF3 (ENSNFUG00015022468) #20	CELF2 (ENSNFUG00015022256) #21	DHTKD1 (ENSNFUG00015022185) #22	CAMK1DB (ENSNFUG00015022146) #23	ucmab (ENSNFUG00015022141) #24	ENSNFUG00015022096 #25	elk3 (ENSNFUG00015022083) #26	ENSNFUG00015022078	COX5A (ENSNFUG00015022073)	arid3b (ENSNFUG00015022066)	EDC3 (ENSNFUG00015022047)	CSK (ENSNFUG00015021854)	adal (ENSNFUG00015021839)	nat10 (ENSNFUG00015021827)	parvg (ENSNFUG00015021816)	parvb (ENSNFUG00015021785)	HDAC10 (ENSNFUG00015021752)	BX957297.1 (ENSNFUG00015021749)
Mangrove rivulus	MODERN SPECIES	6	KCNA1 (ENSKMAG00000004556) #7	ENSKMAG00000004550 #8	ENSKMAG00000004526	pthlhb (ENSKMAG00000004512) #10	tmpob (ENSKMAG00000004488) #11	ldhbb (ENSKMAG00000004441) #12	slc35b4 (ENSKMAG00000004389) #15	golt1bb (ENSKMAG00000004346) #14	ENSKMAG00000004330 #16	NET1 (ENSKMAG00000004260) #17	ENSKMAG00000004225	ENSKMAG00000004109 #19	taf3 (ENSKMAG00000004067) #20	ENSKMAG00000004057 #21	ENSKMAG00000004040 #21	dhtkd1 (ENSKMAG00000003952) #22	camk1db (ENSKMAG00000003892) #23	ucmab (ENSKMAG00000003879) #24	CDK17 (ENSKMAG00000003859) #25	elk3 (ENSKMAG00000003838) #26	hal (ENSKMAG00000003746) #27	ENSKMAG00000003722 #29	FGD6 (ENSKMAG00000003695) #31	nr2c1 (ENSKMAG00000003628) #32	tmcc3 (ENSKMAG00000003605) #33	ENSKMAG00000003567 #34	FLNC (ENSKMAG00000003417) #35	ENSKMAG00000003369 #36	ENSKMAG00000003338	NT5DC3 (ENSKMAG00000003271)	hsp90b1 (ENSKMAG00000003191)
Tiger tail seahorse	MODERN SPECIES	311	BET1L (ENSHCOG00000011032)	ENSHCOG00000011082	ENSHCOG00000011117	ENSHCOG00000011142 #12	AP1S2 (ENSHCOG00000011153)	ENSHCOG00000011158 #11	ENSHCOG00000011165 #9	ENSHCOG00000011176 #8	KCNA1 (ENSHCOG00000011199) #7	slc35b4 (ENSHCOG00000011230) #15	NET1 (ENSHCOG00000011247) #17	ENSHCOG00000011254	ENSHCOG00000011261 #19	TAF3 (ENSHCOG00000011307) #20	ENSHCOG00000011353 ##21	dhtkd1 (ENSHCOG00000011402) #22	camk1db (ENSHCOG00000011435) #23	ucmab (ENSHCOG00000011464) #24	ENSHCOG00000011468 ##26	hal (ENSHCOG00000011530) #27	FGD6 (ENSHCOG00000011545) #31	nr2c1 (ENSHCOG00000011584) #32	tmcc3 (ENSHCOG00000011605) #33	ENSHCOG00000011620 #34	ENSHCOG00000011631	ENSHCOG00000011649 #35	ENSHCOG00000011678 #35	ENSHCOG00000011706 #36	parietopsin (ENSHCOG00000011717) #37	NT5DC3 (ENSHCOG00000011744)	hsp90b1 (ENSHCOG00000011791)
Pinecone sodierfish	MODERN SPECIES	20	KCNA1 (ENSMMDG00005022042) #7	ENSMMDG00005022038 #8	pthlhb (ENSMMDG00005022033) #10	tmpob (ENSMMDG00005022032) #11	slc25a3b (ENSMMDG00005022022)	ldhbb (ENSMMDG00005022017) #12	ENSMMDG00005022014	golt1bb (ENSMMDG00005022012) #14	slc35b4 (ENSMMDG00005022002) #15	ENSMMDG00005022000 #16	NET1 (ENSMMDG00005021777) #17	ASB13 (ENSMMDG00005021741) #18	ENSMMDG00005021734 #19	taf3 (ENSMMDG00005021729) #20	CELF2 (ENSMMDG00005021649) #21	dhtkd1 (ENSMMDG00005021586) #22	camk1db (ENSMMDG00005021114) #23	ucmab (ENSMMDG00005021084) #24	CDK17 (ENSMMDG00005018465) #25	elk3 (ENSMMDG00005018420) #26	hal (ENSMMDG00005018417) #27	zgc:101783 (ENSMMDG00005018413)	hsd17b12a (ENSMMDG00005018395)	alkbh3 (ENSMMDG00005018388)	ENSMMDG00005018384	si:ch1073-281m9.1 (ENSMMDG00005018383)	ENSMMDG00005018380	ckmt1 (ENSMMDG00005018331)	pdia3 (ENSMMDG00005018245)	ENSMMDG00005018236	rlbp1b (ENSMMDG00005018231)
Cod	MODERN SPECIES	22	tmem86a (ENSGMOG00000028528)	ENSGMOG00000025391	ENSGMOG00000004364	ENSGMOG00000002447	ENSGMOG00000024167	ldha (ENSGMOG00000012687)	tsg101a (ENSGMOG00000012693)	ENSGMOG00000012695	ENSGMOG00000034679	ENSGMOG00000010126 #17	ENSGMOG00000010137 #18	ENSGMOG00000028664	ENSGMOG00000025316 #19	ENSGMOG00000033453 #20	ENSGMOG00000010163 #21	dhtkd1 (ENSGMOG00000010176) #22	camk1db (ENSGMOG00000010199) #23	ENSGMOG00000035405 #24	CDK17 (ENSGMOG00000010215) #25	ELK3 (ENSGMOG00000033543) #26	hal (ENSGMOG00000010242) #27	ENSGMOG00000013409	ENSGMOG00000003407	ENSGMOG00000023944	ENSGMOG00000003418	ENSGMOG00000003430	ENSGMOG00000003460	ENSGMOG00000015342	KIF21A (ENSGMOG00000016941)	slc2a13b (ENSGMOG00000016924)	lrrk2 (ENSGMOG00000016854)
Protacanthopterygii	ANCESTRAL SPECIES	10	ENSGT00940000160916	ENSGT00390000004933.k.b #10	ENSGT00940000154098.a.e #11	ENSGT00390000008708.a	ENSGT00940000153525.i.b #12	ENSGT00390000014507.a.a.g #14	ENSGT00390000014507.a.a.h #14	ENSGT00390000002915 #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b #19	ENSGT00950000182994.B.a.b.pb	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.a #26	ENSGT00390000009047.b #27	ENSGT00940000153110.B.f	ENSGT00940000154818.e.b	ENSGT00940000156615.b #28	ENSGT00940000167341 #29	ENSGT00940000156334.a.a #31	ENSGT00940000158165 #32	ENSGT00940000157275.b #33	ENSGT00940000159122.g #34	ENSGT00940000153588.a.a.b #35	ENSGT00940000155472.a.b.a.b #36
Northern pike	MODERN SPECIES	18	ENSELUG00000000332	pthlhb (ENSELUG00000008679) #10	tmpob (ENSELUG00000008664) #11	slc25a3b (ENSELUG00000008650)	ldhbb (ENSELUG00000008561) #12	golt1bb (ENSELUG00000008613) #14	ENSELUG00000029450	slc35b4 (ENSELUG00000008530) #15	ENSELUG00000008507 #16	NET1 (ENSELUG00000008463) #17	ENSELUG00000008439	ENSELUG00000008418 #19	gdi2 (ENSELUG00000008361)	taf3 (ENSELUG00000008323) #20	CELF2 (ENSELUG00000008279) #21	dhtkd1 (ENSELUG00000008213) #22	camk1db (ENSELUG00000008100) #23	CDK17 (ENSELUG00000007898) #25	elk3 (ENSELUG00000007836) #26	hal (ENSELUG00000007804) #27	ENSELUG00000007760	snrpf (ENSELUG00000007737)	NTN4 (ENSELUG00000007724) #28	metap2a (ENSELUG00000007703) #29	ENSELUG00000033148 #30	FGD6 (ENSELUG00000007670) #31	nr2c1 (ENSELUG00000007641) #32	tmcc3 (ENSELUG00000007578) #33	ENSELUG00000007550 #34	FLNC (ENSELUG00000007451) #35	ENSELUG00000007275 #36
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	344	ENSGT01030000234588.b.b.b.a.b.h	ENSGT00390000000068.a.b.c	ENSGT00940000158576.a.b.b #7	ENSGT00940000164299.b.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b.c #10	ENSGT00940000154098.a.e.j #11	ENSGT00390000008708.a.a	ENSGT00940000153525.i.b.e #12	ENSGT00390000014507.a.a.g #14	ENSGT00390000002915.f #15	ENSGT00530000063735.b.g #19	ENSGT00950000182994.B.a.b.pb.a	ENSGT00710000106806.k #20	ENSGT00940000155461.E.k #21	ENSGT00950000183125.a.a.a #22	ENSGT00940000156776.d.b.a.c #23
Salmoninae_a	ANCESTRAL SPECIES	83	ENSGT01030000234588.b.b.b.a.b.h	ENSGT00390000000068.a.b.c	ENSGT00940000158576.a.b.b #7	ENSGT00940000164299.b.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b.c #10	ENSGT00940000154098.a.e.j #11	ENSGT00390000008708.a.a	ENSGT00940000153525.i.b.e #12	ENSGT00390000014507.a.a.g #14	ENSGT00390000002915.f #15	ENSGT00530000063735.b.g #19	ENSGT00950000182994.B.a.b.pb.a	ENSGT00710000106806.k #20	ENSGT00940000155461.E.k #21	ENSGT00950000183125.a.a.a #22	ENSGT00940000156776.d.b.a.c #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b.a.a #25	ENSGT00940000157129.f.a.a #26	ENSGT00940000167341.a #29	ENSGT00940000158165.a #32	ENSGT00940000157275.b.a #33	ENSGT00940000159122.g.a #34	ENSGT00940000162677.pc.b	ENSGT00940000155057.wb.h	ENSGT00940000153201.f	ENSGT00940000153588.a.a.b.f #35
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT01030000234588.b.b.b.a.b.h	ENSGT00390000000068.a.b.c	ENSGT00940000158576.a.b.b #7	ENSGT00940000164299.b.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b.c #10	ENSGT00940000154098.a.e.j #11	ENSGT00390000008708.a.a	ENSGT00940000153525.i.b.e #12	ENSGT00390000014507.a.a.g #14	ENSGT00390000002915.f #15	ENSGT00530000063735.b.g #19	ENSGT00950000182994.B.a.b.pb.a	ENSGT00710000106806.k #20	ENSGT00940000155461.E.k #21	ENSGT00950000183125.a.a.a #22	ENSGT00940000156776.d.b.a.c #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b.a.a #25	ENSGT00940000157129.f.a.a #26	ENSGT00940000167341.a #29	ENSGT00940000158165.a #32	ENSGT00940000157275.b.a #33	ENSGT00940000159122.g.a #34	ENSGT00940000162677.pc.b	ENSGT00940000158637.f	ENSGT01020000230401.b.a.e.b	ENSGT00940000158160.i.b	ENSGT00390000011239.i.e	ENSGT00940000160162.h	ENSGT00940000157447.d
Rainbow trout	MODERN SPECIES		ENSOMYG00000044665 #8	ENSOMYG00000004825	ENSOMYG00000061278 #9	pthlhb (ENSOMYG00000044666) #10	tmpob (ENSOMYG00000044670) #11	slc25a3b (ENSOMYG00000044676)	ldhbb (ENSOMYG00000044694) #12	ENSOMYG00000068445	golt1bb (ENSOMYG00000044707) #14	slc35b4 (ENSOMYG00000044709) #15	ENSOMYG00000050257	ENSOMYG00000071565 #19	ENSOMYG00000044714	ENSOMYG00000044721 #20	ENSOMYG00000044728 #21	dhtkd1 (ENSOMYG00000044831) #22	ENSOMYG00000045450 #23	ucmab (ENSOMYG00000045946) #24	ENSOMYG00000045992 #25	ENSOMYG00000046224 #26	ENSOMYG00000046234	ENSOMYG00000077154	METAP2 (ENSOMYG00000046240) #29	ENSOMYG00000046298 #32	ENSOMYG00000046452 #33	ENSOMYG00000046461 #34	ENSOMYG00000050789	ENSOMYG00000046524	ENSOMYG00000046624	ENSOMYG00000046575	ENSOMYG00000046675
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT01030000234588.b.b.b.a.b.h	ENSGT00390000000068.a.b.c	ENSGT00940000158576.a.b.b #7	ENSGT00940000164299.b.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b.c #10	ENSGT00940000154098.a.e.j #11	ENSGT00390000008708.a.a	ENSGT00940000153525.i.b.e #12	ENSGT00390000014507.a.a.g #14	ENSGT00390000002915.f #15	ENSGT00530000063735.b.g #19	ENSGT00950000182994.B.a.b.pb.a	ENSGT00710000106806.k #20	ENSGT00940000155461.E.k #21	ENSGT00950000183125.a.a.a #22	ENSGT00940000156776.d.b.a.c #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b.a.a #25	ENSGT00940000157129.f.a.a #26	ENSGT00940000154818.e.b.c	ENSGT00940000167341.a #29	ENSGT00940000158165.a #32	ENSGT00940000157275.b.a #33	ENSGT00940000159122.g.a #34	ENSGT00940000162677.pc.b	ENSGT00940000158637.f	ENSGT01020000230401.b.a.e.b	ENSGT00940000158160.i.b	ENSGT00390000011239.i.e	ENSGT00940000160162.h
Coho salmon	MODERN SPECIES	24	ENSOKIG00005045633	CNOT4 (ENSOKIG00005045649)	KCNA1 (ENSOKIG00005045674) #7	ENSOKIG00005045683 #8	pthlhb (ENSOKIG00005045686) #10	tmpob (ENSOKIG00005045692) #11	slc25a3b (ENSOKIG00005045703)	ldhbb (ENSOKIG00005045800) #12	golt1bb (ENSOKIG00005045833) #14	slc35b4 (ENSOKIG00005045858) #15	ENSOKIG00005045887 #19	ENSOKIG00005045897	ENSOKIG00005045910	taf3 (ENSOKIG00005045979) #20	ENSOKIG00005046027 #21	dhtkd1 (ENSOKIG00005003647) #22	ENSOKIG00005003809 #23	ucmab (ENSOKIG00005003918) #24	ENSOKIG00005004011 #25	ELK3 (ENSOKIG00005005272) #26	ENSOKIG00005005288	ENSOKIG00005005322 #29	NR2C1 (ENSOKIG00005005830) #32	ENSOKIG00005007475 #33	ENSOKIG00005007489 #34	ENSOKIG00005007509	ENSOKIG00005007593	ENSOKIG00005008966	PRKAR2B (ENSOKIG00005009105)	HBP1 (ENSOKIG00005009174)	ENSOKIG00005009192
Chinook salmon	MODERN SPECIES	30	bpgm (ENSOTSG00005045596)	ENSOTSG00005045597	CNOT4 (ENSOTSG00005045598)	KCNA1 (ENSOTSG00005045599) #7	ENSOTSG00005045600 #8	ENSOTSG00005045601	ENSOTSG00005045602 #9	ENSOTSG00005045604 #10	ldhbb (ENSOTSG00005045607) #12	golt1bb (ENSOTSG00005045610) #14	slc35b4 (ENSOTSG00005045612) #15	ENSOTSG00005045614 #19	gdi2 (ENSOTSG00005045617)	taf3 (ENSOTSG00005045619) #20	CELF2 (ENSOTSG00005045622) #21	dhtkd1 (ENSOTSG00005045664) #22	camk1db (ENSOTSG00005046570) #23	ucmab (ENSOTSG00005046808) #24	ENSOTSG00005046809 #25	elk3 (ENSOTSG00005046818) #26	snrpf (ENSOTSG00005046819)	metap2a (ENSOTSG00005046821) #29	nr2c1 (ENSOTSG00005046982) #32	tmcc3 (ENSOTSG00005046986) #33	ENSOTSG00005046990 #34	cdkn1ca (ENSOTSG00005046992)	NT5DC3 (ENSOTSG00005046993)	ENSOTSG00005046994	PRKAR2B (ENSOTSG00005046995)	hbp1 (ENSOTSG00005046998)	PTPN9 (ENSOTSG00005046999)
Salmo	ANCESTRAL SPECIES	65	ENSGT01030000234588.b.b.b.a.b.h	ENSGT00390000000068.a.b.c	ENSGT00940000158576.a.b.b #7	ENSGT00940000164299.b.b.b #8	ENSGT00940000159286.a.a #9	ENSGT00390000004933.k.b.c #10	ENSGT00940000154098.a.e.j #11	ENSGT00390000008708.a.a	ENSGT00940000153525.i.b.e #12	ENSGT00390000014507.a.a.g #14	ENSGT00390000002915.f #15	ENSGT00530000063735.b.g #19	ENSGT00950000182994.B.a.b.pb.a	ENSGT00710000106806.k #20	ENSGT00940000155461.E.k #21	ENSGT00950000183125.a.a.a #22	ENSGT00940000156776.d.b.a.c #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b.a.a #25	ENSGT00940000157129.f.a.a #26	ENSGT00940000154818.e.b	ENSGT00940000167341.a #29	ENSGT00940000158165.a #32	ENSGT00940000157275.b.a #33	ENSGT00940000159122.g.a #34	ENSGT00940000162677.pc.b	ENSGT00940000155057.wb.h	ENSGT00940000153201.f	ENSGT00940000153588.a.a.b.f #35	ENSGT00940000158637.f	ENSGT01020000230401.b.a.e.b
Atlantic salmon	MODERN SPECIES	7	ENSSSAG00000120638	ENSSSAG00000096808 #7	ENSSSAG00000114971 #8	ENSSSAG00000071477 #9	pthlhb (ENSSSAG00000091627) #10	tmpob (ENSSSAG00000071470) #11	slc25a3b (ENSSSAG00000071431)	ldhbb (ENSSSAG00000121286) #12	golt1bb (ENSSSAG00000117298) #14	s35b4 (ENSSSAG00000071379) #15	ENSSSAG00000071368 #19	ENSSSAG00000071286	ENSSSAG00000071282 #20	ENSSSAG00000070691 #21	ENSSSAG00000116242	ENSSSAG00000069293 #22	ENSSSAG00000111950 #23	ENSSSAG00000069220	ENSSSAG00000067012 #25	ENSSSAG00000066972 #26	RUXF (ENSSSAG00000066967)	ENSSSAG00000066949 #29	ENSSSAG00000066290 #32	ENSSSAG00000066278 #33	ENSSSAG00000107532	ENSSSAG00000066264 #34	ENSSSAG00000066259	ENSSSAG00000063869	ENSSSAG00000063793	ENSSSAG00000056495 #35	ENSSSAG00000089741
River trout	MODERN SPECIES	8	bpgm (ENSSTUG00000038520)	ENSSTUG00000038528	CNOT4 (ENSSTUG00000038542)	KCNA1 (ENSSTUG00000038609) #7	ENSSTUG00000038616 #8	pthlhb (ENSSTUG00000038622) #10	tmpob (ENSSTUG00000038631) #11	slc25a3b (ENSSTUG00000038654)	ldhbb (ENSSTUG00000038692) #12	golt1bb (ENSSTUG00000038711) #14	slc35b4 (ENSSTUG00000038749) #15	ENSSTUG00000038795 #19	gdi2 (ENSSTUG00000038817)	taf3 (ENSSTUG00000038874) #20	CELF2 (ENSSTUG00000038943) #21	dhtkd1 (ENSSTUG00000039148) #22	camk1db (ENSSTUG00000041415) #23	ucmab (ENSSTUG00000034330) #24	ENSSTUG00000034344 #25	elk3 (ENSSTUG00000034494) #26	snrpf (ENSSTUG00000034530)	metap2a (ENSSTUG00000034566) #29	nr2c1 (ENSSTUG00000035092) #32	tmcc3 (ENSSTUG00000035761) #33	ENSSTUG00000035780 #34	cdkn1ca (ENSSTUG00000035831)	MAGI2 (ENSSTUG00000035851)	ENSSTUG00000036054	ldha (ENSSTUG00000036069)	FLNC (ENSSTUG00000036248) #35	ENSSTUG00000036956
Huchen	MODERN SPECIES	422	CNOT4 (ENSHHUG00000000444)	KCNA1 (ENSHHUG00000000489) #7	ENSHHUG00000000510 #8	ENSHHUG00000000516 #9	pthlhb (ENSHHUG00000000523) #10	tmpob (ENSHHUG00000000532) #11	slc25a3b (ENSHHUG00000000548)	ldhbb (ENSHHUG00000000706) #12	golt1bb (ENSHHUG00000001304) #14	slc35b4 (ENSHHUG00000001317) #15	ENSHHUG00000001370 #19	ENSHHUG00000001375 #19	gdi2 (ENSHHUG00000001385)	taf3 (ENSHHUG00000001791) #20	CELF2 (ENSHHUG00000001800) #21	dhtkd1 (ENSHHUG00000001874) #22
Salmoninae	ANCESTRAL SPECIES	171	ENSGT00940000164299.b.b.a #8	ENSGT00940000160916	ENSGT00390000004933.k.b.d #10	ENSGT00940000154098.a.e.i #11	ENSGT00390000008708.a.b	ENSGT00940000153525.i.b.f #12	ENSGT00390000014507.a.a.h #14	ENSGT00390000002915.e #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b.h #19	ENSGT00950000182994.B.a.b.pb.b	ENSGT00710000106806.l #20	ENSGT00940000155461.E.l #21	ENSGT00950000183125.a.a.b #22	ENSGT00940000156776.d.b.a.d #23	ENSGT00940000155834.i.b.b #25	ENSGT00940000155834.i.b.a.b #25	ENSGT00940000157129.f.a.b #26	ENSGT00390000009047.b.z #27	ENSGT01070000255793	ENSGT00940000164757	ENSGT00940000156615.b #28	ENSGT00940000167341.b #29	ENSGT00940000153655.B #30	ENSGT00940000157922.a.b	ENSGT00940000156334.a.a #31	ENSGT00940000158165.b #32	ENSGT00940000157275.b.b #33	ENSGT00940000159122.g.b #34
Huchen	MODERN SPECIES	825	ENSHHUG00000034408	pthlhb (ENSHHUG00000034420) #10	tmpob (ENSHHUG00000034424) #11	ENSHHUG00000034436	slc25a3b (ENSHHUG00000034441)	ldhbb (ENSHHUG00000034481) #12	golt1bb (ENSHHUG00000034985) #14	slc35b4 (ENSHHUG00000034988) #15	chchd3b (ENSHHUG00000035047) #16	NET1 (ENSHHUG00000035070) #17	ASB13 (ENSHHUG00000035088) #18	ENSHHUG00000035095 #19	gdi2 (ENSHHUG00000035132)	taf3 (ENSHHUG00000035242) #20	ENSHHUG00000035252 #21	dhtkd1 (ENSHHUG00000035304) #22	ENSHHUG00000035379 #23
Salmoninae_a	ANCESTRAL SPECIES	65	ENSGT00940000164299.b.b.a #8	ENSGT00940000160916	ENSGT00390000004933.k.b.d #10	ENSGT00940000154098.a.e.i #11	ENSGT00390000008708.a.b	ENSGT00940000153525.i.b.f #12	ENSGT00390000014507.a.a.h #14	ENSGT00390000002915.e #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b.h #19	ENSGT00950000182994.B.a.b.pb.b	ENSGT00710000106806.l #20	ENSGT00940000155461.E.l #21	ENSGT00950000183125.a.a.b #22	ENSGT00940000156776.d.b.a.d #23	ENSGT00940000155834.i.b.b #25	ENSGT00940000157129.f.a.b #26	ENSGT00390000009047.b.z #27	ENSGT00940000153110.B.f	ENSGT00940000154818.e.b	ENSGT00940000156615.b #28	ENSGT00940000167341.b #29	ENSGT00940000153655.B #30	ENSGT00940000157922.a.b	ENSGT00940000156334.a.a #31	ENSGT00940000158165.b #32	ENSGT00940000157275.b.b #33	ENSGT00940000159122.g.b #34	ENSGT00940000153588.a.a.b.e #35
Salmo	ANCESTRAL SPECIES	60	ENSGT00940000164299.b.b.a #8	ENSGT00940000160916	ENSGT00390000004933.k.b.d #10	ENSGT00940000154098.a.e.i #11	ENSGT00390000008708.a.b	ENSGT00940000153525.i.b.f #12	ENSGT00390000014507.a.a.h #14	ENSGT00390000002915.e #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b.h #19	ENSGT00950000182994.B.a.b.pb.b	ENSGT00710000106806.l #20	ENSGT00940000155461.E.l #21	ENSGT00950000183125.a.a.b #22	ENSGT00940000156776.d.b.a.d #23	ENSGT00940000155834.i.b.a.b #25	ENSGT00940000157129.f.a.b #26	ENSGT00390000009047.b.z.b #27	ENSGT00940000153110.B.f	ENSGT00940000164757.a	ENSGT00940000156615.b #28	ENSGT00940000167341.b #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165.b #32	ENSGT00940000157275.b.b #33	ENSGT00940000159122.g.b #34	ENSGT00940000153588.a.a.b.e #35	ENSGT00940000155472.a.b.a.b #36
River trout	MODERN SPECIES	37	CNOT4 (ENSSTUG00000051252)	KCNA1 (ENSSTUG00000051253) #7	ENSSTUG00000051254 #8	ENSSTUG00000051255	pthlhb (ENSSTUG00000051256) #10	tmpob (ENSSTUG00000051257) #11	slc25a3b (ENSSTUG00000051258)	golt1bb (ENSSTUG00000014009) #14	slc35b4 (ENSSTUG00000014039) #15	chchd3b (ENSSTUG00000014101) #16	NET1 (ENSSTUG00000014132) #17	ASB13 (ENSSTUG00000014806) #18	gdi2 (ENSSTUG00000014955)	taf3 (ENSSTUG00000015161) #20	CELF2 (ENSSTUG00000015201) #21	dhtkd1 (ENSSTUG00000015357) #22	camk1db (ENSSTUG00000017654) #23	CDK17 (ENSSTUG00000018320) #25	elk3 (ENSSTUG00000019202) #26	hal (ENSSTUG00000019241) #27	ENSSTUG00000020018	ENSSTUG00000020029	NTN4 (ENSSTUG00000020034) #28	metap2a (ENSSTUG00000020059) #29	ENSSTUG00000020278 #30	FGD6 (ENSSTUG00000020300) #31	nr2c1 (ENSSTUG00000020574) #32	tmcc3 (ENSSTUG00000020606) #33	ENSSTUG00000020629 #34	FLNC (ENSSTUG00000021115) #35	ENSSTUG00000039368 #36
Atlantic salmon	MODERN SPECIES	1	ENSSSAG00000113251 #8	ENSSSAG00000079511	pthlhb (ENSSSAG00000111398) #10	ENSSSAG00000095361	tmpob (ENSSSAG00000079549) #11	slc25a3b (ENSSSAG00000079558)	ldhbb (ENSSSAG00000071409) #12	golt1bb (ENSSSAG00000082709) #14	chchd3b (ENSSSAG00000079607) #16	ENSSSAG00000079616 #17	ASB13 (ENSSSAG00000079639) #18	ENSSSAG00000079646 #19	GDI2 (ENSSSAG00000079660)	ENSSSAG00000079670 #20	ENSSSAG00000003957 #21	dhtkd1 (ENSSSAG00000004095) #22	ENSSSAG00000069225 #23	CDK17 (ENSSSAG00000005463) #25	ENSSSAG00000114706	ENSSSAG00000113798	ELK3 (ENSSSAG00000007647) #26	hal (ENSSSAG00000007680) #27	CCDC38 (ENSSSAG00000008350)	ENSSSAG00000008364 #28	ENSSSAG00000008389 #29	ENSSSAG00000009161 #30	FGD6 (ENSSSAG00000009198) #31	NR2C1 (ENSSSAG00000009262) #32	TMCC3 (ENSSSAG00000009291) #33	ENSSSAG00000087913	ENSSSAG00000092545 #34
Oncorhynchus	ANCESTRAL SPECIES	10	ENSGT00940000158576.a.b.a #7	ENSGT00940000164299.b.b.a #8	ENSGT00940000160916	ENSGT00390000004933.k.b.d #10	ENSGT00940000154098.a.e.i #11	ENSGT00390000008708.a.b	ENSGT00390000014507.a.a.h #14	ENSGT00390000002915.e #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b.h #19	ENSGT00950000182994.B.a.b.pb.b	ENSGT00710000106806.l #20	ENSGT00940000155461.E.l #21	ENSGT00950000183125.a.a.b #22	ENSGT00940000156776.d.b.a.d #23	ENSGT00940000155834.i.b.b.a #25	ENSGT00940000157129.f.a.b #26	ENSGT00390000009047.b.z #27	ENSGT00940000153110.B.f	ENSGT00940000154818.e.b	ENSGT00940000156615.b #28	ENSGT00940000167341.b #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165.b #32	ENSGT00940000157275.b.b #33	ENSGT00940000159122.g.b #34	ENSGT00940000153588.a.a.b.e #35	ENSGT00940000155472.a.b.a.b #36
Rainbow trout	MODERN SPECIES	11	ENSOMYG00000008911 #7	ENSOMYG00000008920 #8	ENSOMYG00000008988	pthlhb (ENSOMYG00000052478) #10	tmpob (ENSOMYG00000009068) #11	slc25a3b (ENSOMYG00000009202)	golt1bb (ENSOMYG00000009361) #14	slc35b4 (ENSOMYG00000009392) #15	chchd3b (ENSOMYG00000009427) #16	ENSOMYG00000009461 #17	ASB13 (ENSOMYG00000009491) #18	ENSOMYG00000009516 #19	GDI2 (ENSOMYG00000009679)	ENSOMYG00000010058 #20	ENSOMYG00000010117 #21	ENSOMYG00000011038 #22	camk1db (ENSOMYG00000065172) #23	ENSOMYG00000066222	CDK17 (ENSOMYG00000016470) #25	ENSOMYG00000077575	ELK3 (ENSOMYG00000016504) #26	HAL (ENSOMYG00000016531) #27	CCDC38 (ENSOMYG00000017530)	SNRPF (ENSOMYG00000058659)	NTN4 (ENSOMYG00000017610) #28	ENSOMYG00000017770 #29	ENSOMYG00000017833 #30	FGD6 (ENSOMYG00000017867) #31	NR2C1 (ENSOMYG00000017998) #32	TMCC3 (ENSOMYG00000063782) #33	ENSOMYG00000067619 #34
Oncorhynchus_a	ANCESTRAL SPECIES	5	ENSGT00940000164299.b.b.a #8	ENSGT00940000160916	ENSGT00390000004933.k.b.d #10	ENSGT00940000154098.a.e.i #11	ENSGT00390000008708.a.b	ENSGT00390000014507.a.a.h #14	ENSGT00390000002915.e #15	ENSGT00390000000903.a.j #16	ENSGT00940000155849.g #17	ENSGT00940000160326.d #18	ENSGT00530000063735.b.h #19	ENSGT00950000182994.B.a.b.pb.b	ENSGT00900000143702	ENSGT00710000106806.l #20	ENSGT00940000155461.E.l #21	ENSGT00950000183125.a.a.b #22	ENSGT00940000156776.d.b.a.d #23	ENSGT00940000155834.i.b.b.a #25	ENSGT00940000157129.f.a.b #26	ENSGT00390000009047.b.z #27	ENSGT00940000153110.B.f	ENSGT00940000154818.e.b.d	ENSGT00940000156615.b #28	ENSGT00940000167341.b #29	ENSGT00940000153655.B #30	ENSGT00940000156334.a.a #31	ENSGT00940000158165.b #32	ENSGT00940000157275.b.b #33	ENSGT00940000159122.g.b #34	ENSGT00940000153588.a.a.b.e #35	ENSGT00940000155472.a.b.a.b #36
Coho salmon	MODERN SPECIES	14	ENSOKIG00005016167 #8	ENSOKIG00005016181	pthlhb (ENSOKIG00005016357) #10	ENSOKIG00005016360	tmpob (ENSOKIG00005016372) #11	slc25a3b (ENSOKIG00005016396)	golt1bb (ENSOKIG00005016467) #14	slc35b4 (ENSOKIG00005016494) #15	chchd3b (ENSOKIG00005016532) #16	NET1 (ENSOKIG00005016560) #17	ASB13 (ENSOKIG00005016594) #18	ENSOKIG00005016606 #19	GDI2 (ENSOKIG00005016669)	TAF3 (ENSOKIG00005016817) #20	CELF2 (ENSOKIG00005016898) #21	DHTKD1 (ENSOKIG00005017359) #22	camk1db (ENSOKIG00005019764) #23	CDK17 (ENSOKIG00005020000) #25	ELK3 (ENSOKIG00005020245) #26	hal (ENSOKIG00005020375) #27	snrpf (ENSOKIG00005022038)	NTN4 (ENSOKIG00005022048) #28	ENSOKIG00005022068 #29	ENSOKIG00005022229 #30	FGD6 (ENSOKIG00005022245) #31	nr2c1 (ENSOKIG00005022392) #32	TMCC3 (ENSOKIG00005023233) #33	ENSOKIG00005023255 #34	ENSOKIG00005023289	FLNC (ENSOKIG00005023423) #35	ENSOKIG00005028515
Chinook salmon	MODERN SPECIES	10	ENSOTSG00005002441 #8	AGBL3 (ENSOTSG00005002448)	pthlhb (ENSOTSG00005002457) #10	tmpob (ENSOTSG00005002461) #11	slc25a3b (ENSOTSG00005002470)	golt1bb (ENSOTSG00005002556) #14	slc35b4 (ENSOTSG00005002559) #15	chchd3b (ENSOTSG00005002714) #16	ENSOTSG00005002727	ENSOTSG00005002735 #19	gdi2 (ENSOTSG00005002748)	ENSOTSG00005002898	taf3 (ENSOTSG00005002901) #20	ENSOTSG00005002907 #21	ENSOTSG00005002914	dhtkd1 (ENSOTSG00005002971) #22	CDK17 (ENSOTSG00005004329) #25	elk3 (ENSOTSG00005004332) #26	hal (ENSOTSG00005004349) #27	ENSOTSG00005007091	snrpf (ENSOTSG00005007092)	NTN4 (ENSOTSG00005007093) #28	FLNC (ENSOTSG00005007130) #35	ENSOTSG00005008720 #36	ENSOTSG00005008721	pgghg (ENSOTSG00005008722)	metap2a (ENSOTSG00005008723) #29	nr2c1 (ENSOTSG00005008727) #32	ENSOTSG00005008733	ENSOTSG00005008734	SLCO1C1 (ENSOTSG00005008735)
Salmoninae	ANCESTRAL SPECIES																	ENSGT00950000183125.a.b #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00950000183125.a.b #22
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00950000183125.a.b #22
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00950000183125.a.b #22
Chinook salmon	MODERN SPECIES	2621																ENSOTSG00005019187 #22
Otomorpha	ANCESTRAL SPECIES	547															ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.b ##26
Clupeiformes	ANCESTRAL SPECIES	535														ENSGT00710000106806.q #20	ENSGT00940000155461.E #21	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00940000155834.i.b #25	ENSGT00940000157129.f.b ##26
Atlantic herring	MODERN SPECIES	19	kiaa0513 (ENSCHAG00000021629)	ENSCHAG00000021576	ces3 (ENSCHAG00000021517)	zfpm1 (ENSCHAG00000021509)	trhr2 (ENSCHAG00000021504)	zc3h18 (ENSCHAG00000021492)	ENSCHAG00000021457	gdpgp1 (ENSCHAG00000021439)	ENSCHAG00000021421	rhcgb (ENSCHAG00000021162)	POLG (ENSCHAG00000021087)	fanci (ENSCHAG00000020519)	ENSCHAG00000020499	FBXO31 (ENSCHAG00000020194)	ENSCHAG00000019865 #21	dhtkd1 (ENSCHAG00000019216) #22	camk1db (ENSCHAG00000017326) #23	ucmab (ENSCHAG00000017292) #24	CDK17 (ENSCHAG00000016953) #25	ELK3 (ENSCHAG00000016930) ##26	hal (ENSCHAG00000016631) #27	ENSCHAG00000016579	metap2b (ENSCHAG00000016519)	ENSCHAG00000016323 #31	NR2C1 (ENSCHAG00000015983) #32	ube2h (ENSCHAG00000015945)	ENSCHAG00000015939	ENSCHAG00000015667	api5 (ENSCHAG00000015164)	hsd17b12a (ENSCHAG00000014889)	alkbh3 (ENSCHAG00000014876)
Denticle herring	MODERN SPECIES	250													ENSDCDG00000008363	TAF3 (ENSDCDG00000008384) #20	ENSDCDG00000008431 #21	dhtkd1 (ENSDCDG00000009522) #22	ENSDCDG00000011264	ENSDCDG00000011279	ENSDCDG00000007481	si:dkey-30c15.13 (ENSDCDG00000007487)	ENSDCDG00000007502	chid1 (ENSDCDG00000007548)	gatd1 (ENSDCDG00000007646)	cd151 (ENSDCDG00000007652)	ENSDCDG00000007655	cracr2b (ENSDCDG00000007656)	ENSDCDG00000007663 #31	ENSDCDG00000007668	ENSDCDG00000007741 #27	ENSDCDG00000007744 #27	ENSDCDG00000007749 #25
Otophysi	ANCESTRAL SPECIES	31	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT01040000240558.b	ENSGT00940000156076.a.b.b.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000162219	ENSGT00940000163235.E	ENSGT00940000164871.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a.f	ENSGT00940000160684	ENSGT00940000156912.c.b	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00390000009047.b #27	ENSGT00940000162591	ENSGT00390000006043.p	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000160208	ENSGT00940000154555.e.a.a	ENSGT00940000155347.a.a
Characiphysae	ANCESTRAL SPECIES	6	ENSGT00940000158650	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT01040000240558.b	ENSGT00940000156076.a.b.b.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000162219	ENSGT00940000163235.E	ENSGT00940000164871.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a.f	ENSGT00940000160684	ENSGT00940000156912.c.b	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00390000009047.b #27	ENSGT00940000162591	ENSGT00390000006043.p	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000160208.m	ENSGT00940000154555.e.a.a	ENSGT00940000155347.a.a	ENSGT00940000157971.fb
Channel catfish	MODERN SPECIES	5	RAB3IL1 (ENSIPUG00000010833)	ENSIPUG00000010809	HPS5 (ENSIPUG00000010772)	GTF2H1 (ENSIPUG00000010708)	ENSIPUG00000010695	ENSIPUG00000010681	ENSIPUG00000010658	ENSIPUG00000010640	ENSIPUG00000010610	ENSIPUG00000010588	ENSIPUG00000010574	saal1 (ENSIPUG00000010526)	tph (ENSIPUG00000010464)	sergef (ENSIPUG00000010447)	kcnc1 (ENSIPUG00000010415)	dhtkd1 (ENSIPUG00000010338) #22	camk1db (ENSIPUG00000010303) #23	ucma (ENSIPUG00000010284) #24	hal (ENSIPUG00000010229) #27	nox5 (ENSIPUG00000010196)	glcea (ENSIPUG00000010184)	mdkb (ENSIPUG00000010158)	ambra1b (ENSIPUG00000010044)	DGKZ (ENSIPUG00000009929)	PHF21A (ENSIPUG00000009766)	ENSIPUG00000009746	prdm11 (ENSIPUG00000009718)	ENSIPUG00000009711	ENSIPUG00000009686	bet1l (ENSIPUG00000009642)	arpp19b (ENSIPUG00000009632)
Characiphysae_b	ANCESTRAL SPECIES	5	ENSGT00940000159102	ENSGT00940000166204	ENSGT00940000155818	ENSGT00390000015066	ENSGT01040000240558.b	ENSGT00940000156076.a.b.b.a	ENSGT00940000156076.a.a.a.b.a.a	ENSGT00940000163235.A.b.a.b	ENSGT00940000162219	ENSGT00940000163235.E	ENSGT00940000164871.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a.f	ENSGT00940000160684	ENSGT00940000156912.c.b	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00730000111314	ENSGT00390000009047.b #27	ENSGT00940000162591	ENSGT00390000006043.p	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000160208.m	ENSGT00940000154555.e.a.a	ENSGT00940000155347.a.a
Characoidei	ANCESTRAL SPECIES	65							ENSGT00940000163235.A.b.a.b	ENSGT00940000162219	ENSGT00940000163235.E	ENSGT00940000164871.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a.f	ENSGT00940000160684	ENSGT00940000166466.e.a	ENSGT00940000156912.c.b	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00390000009047.b #27	ENSGT00940000162591	ENSGT00390000006043.p	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000160208.m	ENSGT00940000154555.e.a.a	ENSGT00940000155347.a.a	ENSGT00940000157971.fb
Red-bellied piranha	MODERN SPECIES	122				ENSPNAG00000007703	ENSPNAG00000007693	ENSPNAG00000007682	ENSPNAG00000000396	ENSPNAG00000000392	ENSPNAG00000007663	ENSPNAG00000007656	saal1 (ENSPNAG00000007645)	tph1a (ENSPNAG00000007639)	SERGEF (ENSPNAG00000000372)	ENSPNAG00000007633	kcnc1b (ENSPNAG00000000367)	dhtkd1 (ENSPNAG00000000360) #22	camk1db (ENSPNAG00000000352) #23	ucmab (ENSPNAG00000007616) #24	hal (ENSPNAG00000007611) #27	NOX5 (ENSPNAG00000007601)	glcea (ENSPNAG00000000328)	ambra1b (ENSPNAG00000007590)	mdkb (ENSPNAG00000007574)	DGKZ (ENSPNAG00000000309)	PHF21A (ENSPNAG00000005288)	PRDM11 (ENSPNAG00000007519)	ENSPNAG00000000258	ENSPNAG00000007512	BET1L (ENSPNAG00000007193)	arpp19b (ENSPNAG00000000251)	ENSPNAG00000000241
Mexicana tetra	MODERN SPECIES	23	ENSAMXG00000014818	rsl24d1 (ENSAMXG00000034851)	myo9ab (ENSAMXG00000014841)	GRAMD2A (ENSAMXG00000035859)	ENSAMXG00000040899	znf609a (ENSAMXG00000036830)	ENSAMXG00000000858	ENSAMXG00000030647	spg11 (ENSAMXG00000000846)	ciao2a (ENSAMXG00000041610)	saal1 (ENSAMXG00000018126)	tph1a (ENSAMXG00000018104)	SERGEF (ENSAMXG00000018058)	ENSAMXG00000036422	kcnc1b (ENSAMXG00000017988)	dhtkd1 (ENSAMXG00000017957) #22	camk1db (ENSAMXG00000032944) #23	ucmab (ENSAMXG00000043842) #24	hal (ENSAMXG00000017914) #27	NOX5 (ENSAMXG00000017784)	glcea (ENSAMXG00000040569)	ambra1b (ENSAMXG00000017714)	mdkb (ENSAMXG00000042887)	DGKZ (ENSAMXG00000017700)	PHF21A (ENSAMXG00000017642)	PRDM11 (ENSAMXG00000017602)	ENSAMXG00000017557	ENSAMXG00000017571	BET1L (ENSAMXG00000040927)	arpp19b (ENSAMXG00000003121)	ENSAMXG00000017247
Electric eel	MODERN SPECIES	389											ENSEEEG00000011959	saal1 (ENSEEEG00000011958)	tph1a (ENSEEEG00000011930)	SERGEF (ENSEEEG00000011920)	kcnc1b (ENSEEEG00000011908)	dhtkd1 (ENSEEEG00000011748) #22	camk1db (ENSEEEG00000011517) #23	ENSEEEG00000011497	hal (ENSEEEG00000011496) #27	NOX5 (ENSEEEG00000011466)	glcea (ENSEEEG00000011465)	ambra1b (ENSEEEG00000011455)	mdkb (ENSEEEG00000011448)	DGKZ (ENSEEEG00000011154)	PHF21A (ENSEEEG00000011100)	PRDM11 (ENSEEEG00000011093)	ENSEEEG00000011091	ENSEEEG00000011089	BET1L (ENSEEEG00000011087)	arpp19b (ENSEEEG00000011084)	ENSEEEG00000010493
Cyprinoidei	ANCESTRAL SPECIES	42	ENSGT00940000157220.b	ENSGT01030000234638.b.b.c.a	ENSGT00940000159320	ENSGT00390000016718	ENSGT00950000182844.b.b.b.b	ENSGT00390000000453	ENSGT00390000005855	ENSGT00940000162219.w.a	ENSGT00940000163235.E	ENSGT00940000164871.b.e.b	ENSGT00940000164871.a.a	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a.f	ENSGT00940000160684	ENSGT00940000156912.c.b	ENSGT00950000183125.a #22	ENSGT00940000156776.d.b.a #23	ENSGT00390000011492.b #24	ENSGT00390000009047.b #27	ENSGT00940000162591	ENSGT00390000006043.p	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b	ENSGT00940000156124.c.b	ENSGT00940000159837	ENSGT00730000111696.b	ENSGT00990000203615.a.a.a.a	ENSGT00940000160208	ENSGT00940000154555.e.a.a	ENSGT00940000155347.a.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	57	ENSGT00940000159320.e	ENSGT00390000016718.b	ENSGT00950000182844.b.b.b.b.a	ENSGT00390000000453	ENSGT00390000005855	ENSGT00940000162219.w.a	ENSGT00940000163235.A.a.a.b	ENSGT01040000240558.b	ENSGT00940000162219.w.b	ENSGT00940000164871.b.e.a	ENSGT00940000164871.b.e.b.b	ENSGT00390000004737.b.b.c	ENSGT00950000182885.A.a.f.h	ENSGT00940000160684.d	ENSGT00940000156912.c.b.a	ENSGT00950000183125.a.c #22	ENSGT00940000156776.d.b.a.b #23	ENSGT00390000011492.b.a #24	ENSGT00390000009047.b.g #27	ENSGT00940000162591.b	ENSGT00390000006043.p.a.a	ENSGT00390000016223.p.b	ENSGT00940000156152.e.a.b.b	ENSGT00940000156124.c.b.a	ENSGT00940000159837.b	ENSGT00730000111696.b.a.a	ENSGT00990000203615.a.a.a.a.b	ENSGT00940000160208.k.b	ENSGT00940000155347.a.a.a	ENSGT00940000162556.G.c.a.b.c.a.b.a.b	ENSGT00390000002251.c
Cyprininae_a	ANCESTRAL SPECIES	106	ENSGT00940000159320.e	ENSGT00390000016718.b	ENSGT00950000182844.b.b.b.b.a	ENSGT00390000000453	ENSGT00390000005855	ENSGT00940000162219.w.a	ENSGT00940000163235.E	ENSGT00940000164871.b.e.b.a	ENSGT00940000162219.w.b	ENSGT00940000164871.b.e.a	ENSGT00940000164871.b.e.b.b	ENSGT00390000004737.b.b.c	ENSGT00950000182885.A.a.f.h	ENSGT00940000160684.d	ENSGT00940000156912.c.b.a	ENSGT00950000183125.a.c #22	ENSGT00940000156776.d.b.a.b #23	ENSGT00390000011492.b.a #24	ENSGT00390000009047.b.g #27	ENSGT00940000162591.b	ENSGT00390000006043.p.a.a	ENSGT00390000016223.p.b	ENSGT00940000156152.e.a.b.b	ENSGT00940000156124.c.b.a	ENSGT00940000159837.b	ENSGT00730000111696.b.a.a	ENSGT00990000203615.a.a.a.a.b	ENSGT00940000160208.k.b	ENSGT00940000155347.a.a.a	ENSGT00940000162556.G.c.a.b.c.a.b.a.a.b	ENSGT00390000002251.c
Common carp reference	MODERN SPECIES	37	ENSCCRG00000013612	unc45a (ENSCCRG00000076502)	rhcgb (ENSCCRG00000020422)	ENSCCRG00000001784	fanci (ENSCCRG00000027970)	ENSCCRG00000028000	ENSCCRG00000028010	ENSCCRG00000079784	ENSCCRG00000060778	ENSCCRG00000023938	ENSCCRG00000023953	saal1 (ENSCCRG00000052672)	tph1a (ENSCCRG00000033540)	SERGEF (ENSCCRG00000033550)	kcnc1b (ENSCCRG00000071017)	dhtkd1 (ENSCCRG00000005533) #22	camk1db (ENSCCRG00000011202) #23	ucmab (ENSCCRG00000056442) #24	hal (ENSCCRG00000059267) #27	ENSCCRG00000011188	ambra1b (ENSCCRG00000011080)	ENSCCRG00000081100	ENSCCRG00000014580	ENSCCRG00000014629	ENSCCRG00000045111	ENSCCRG00000045118	ENSCCRG00000061441	ENSCCRG00000074386	ENSCCRG00000010884	ptdss2 (ENSCCRG00000070588)	ENSCCRG00000010867
Golden-line barbel	MODERN SPECIES	705							ENSSGRG00000027140	ENSSGRG00000027141	ENSSGRG00000027143	ENSSGRG00000027147	ENSSGRG00000027150	ENSSGRG00000027159	saal1 (ENSSGRG00000027314)	tph1a (ENSSGRG00000027322)	kcnc1b (ENSSGRG00000027395)	dhtkd1 (ENSSGRG00000027399) #22	camk1db (ENSSGRG00000027643) #23	ucmab (ENSSGRG00000028992) #24	hal (ENSSGRG00000029009) #27	NOX5 (ENSSGRG00000029705)	glcea (ENSSGRG00000029716)	ambra1b (ENSSGRG00000029719)	ENSSGRG00000029721	mdkb (ENSSGRG00000029722)	DGKZ (ENSSGRG00000029768)	PHF21A (ENSSGRG00000031260)	PRDM11 (ENSSGRG00000031263)	ENSSGRG00000031264	ENSSGRG00000031265	BET1L (ENSSGRG00000031266)	ENSSGRG00000031268
Goldfish	MODERN SPECIES	17	fanci (ENSCARG00000030142)	ENSCARG00000030103	ENSCARG00000030114	ENSCARG00000030090	ENSCARG00000030071	ENSCARG00000029995	ENSCARG00000029981	ENSCARG00000029971	ENSCARG00000029903	ENSCARG00000029826	ENSCARG00000029600	ENSCARG00000029569	saal1 (ENSCARG00000029506)	tph1a (ENSCARG00000024649)	kcnc1b (ENSCARG00000024455)	dhtkd1 (ENSCARG00000024195) #22	camk1db (ENSCARG00000024665) #23	ucmab (ENSCARG00000024642) #24	hal (ENSCARG00000023503) #27	NOX5 (ENSCARG00000023357)	glcea (ENSCARG00000023337)	ambra1b (ENSCARG00000023018)	ENSCARG00000023001	mdkb (ENSCARG00000022996)	DGKZ (ENSCARG00000021484)	PHF21A (ENSCARG00000021340)	PRDM11 (ENSCARG00000021320)	ENSCARG00000021314	ENSCARG00000021303	BET1L (ENSCARG00000021293)	ENSCARG00000020010
Cyprininae	ANCESTRAL SPECIES	383			ENSGT00940000175068.a.b	ENSGT00390000012559.i	ENSGT00390000008679.f	ENSGT00940000164760.d	ENSGT00940000157220.b.e	ENSGT01030000234638.b.b.c.a.c	ENSGT00940000159320.f	ENSGT00390000016718.a	ENSGT00950000182844.b.b.b.b.b	ENSGT00390000004737.b.b.d	ENSGT00950000182885.A.a.f.g	ENSGT00940000160684.c	ENSGT00940000156912.c.b.b	ENSGT00950000183125.a.d #22	ENSGT00940000156776.d.b.a.a #23	ENSGT00390000011492.b.b #24	ENSGT00390000009047.b.h #27	ENSGT00940000162591.a	ENSGT00390000006043.p.a.b	ENSGT00390000016223.p.a	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b.a	ENSGT00940000156124.c.b.b	ENSGT00940000159837.a	ENSGT00730000111696.b.a.b	ENSGT00990000203615.a.a.a.a.a	ENSGT00940000160208.k.a	ENSGT00940000155347.a.a.b
Cyprininae_a	ANCESTRAL SPECIES	415												ENSGT00390000004737.b.b.d	ENSGT00950000182885.A.a.f.g	ENSGT00940000160684.c	ENSGT00940000156912.c.b.b	ENSGT00950000183125.a.d #22	ENSGT00940000156776.d.b.a.a #23	ENSGT00390000011492.b.b #24	ENSGT00390000009047.b.h #27	ENSGT00940000162591.a	ENSGT00390000006043.p.a.b	ENSGT00390000016223.p.a	ENSGT00940000160394.b	ENSGT00390000007640.b.b	ENSGT00940000156152.e.a.b.a	ENSGT00940000156124.c.b.b	ENSGT00940000159837.a	ENSGT00730000111696.b.a.b	ENSGT00990000203615.a.a.a.a.a	ENSGT00940000160208.k.a	ENSGT00940000155347.a.a.b
Golden-line barbel	MODERN SPECIES	1369															kcnc1b (ENSSGRG00000018912)	dhtkd1 (ENSSGRG00000018778) #22	camk1db (ENSSGRG00000018775) #23	ucmab (ENSSGRG00000018772) #24	hal (ENSSGRG00000018752) #27	NOX5 (ENSSGRG00000018717)	glcea (ENSSGRG00000018716)	ambra1b (ENSSGRG00000018672)	ENSSGRG00000018670	mdkb (ENSSGRG00000018668)	DGKZ (ENSSGRG00000018589)	PHF21A (ENSSGRG00000018497)	PRDM11 (ENSSGRG00000018495)	ENSSGRG00000018494	ENSSGRG00000018491	BET1L (ENSSGRG00000018489)	ENSSGRG00000017881
Common carp reference	MODERN SPECIES	33	rag2 (ENSCCRG00000076758)	rag1 (ENSCCRG00000069358)	ENSCCRG00000068937	furinb (ENSCCRG00000013554)	ENSCCRG00000016706	unc45a (ENSCCRG00000070116)	gdpgp1 (ENSCCRG00000075359)	rhcgb (ENSCCRG00000016805)	ENSCCRG00000014299	ENSCCRG00000014311	ENSCCRG00000033570	saal1 (ENSCCRG00000033575)	tph1a (ENSCCRG00000033585)	SERGEF (ENSCCRG00000033672)	kcnc1b (ENSCCRG00000078528)	dhtkd1 (ENSCCRG00000033676) #22	camk1db (ENSCCRG00000061277) #23	ucmab (ENSCCRG00000041213) #24	glcea (ENSCCRG00000066932)	ambra1b (ENSCCRG00000011210)	ENSCCRG00000018816	ENSCCRG00000041626	ENSCCRG00000041675	ENSCCRG00000045873	ENSCCRG00000045869	ENSCCRG00000058016	ENSCCRG00000041590	ENSCCRG00000042840	ENSCCRG00000010858	ptdss2 (ENSCCRG00000010699)	ENSCCRG00000010854
Goldfish	MODERN SPECIES	45	ENSCARG00000066146	ptdss2 (ENSCARG00000066158)	FCSK (ENSCARG00000066195)	ENSCARG00000066300	ENSCARG00000066303	rag1 (ENSCARG00000066310)	accs (ENSCARG00000066322)	furinb (ENSCARG00000066455)	MAN2A2 (ENSCARG00000066978)	ENSCARG00000067771	rhcgb (ENSCARG00000067821)	ENSCARG00000068192	tph1a (ENSCARG00000068432)	ENSCARG00000069039	kcnc1b (ENSCARG00000069057)	dhtkd1 (ENSCARG00000069122) #22	ENSCARG00000069220	dkk3b (ENSCARG00000069222)	far1 (ENSCARG00000069236)	ENSCARG00000069270	PPFIBP2 (ENSCARG00000069340)	kdm7ab (ENSCARG00000069587)	cnot1 (ENSCARG00000069596)	cyp2x9 (ENSCARG00000069622)	e2f4 (ENSCARG00000069634)	ELMO3 (ENSCARG00000069640)	ENSCARG00000069646	ENSCARG00000069677	MMP15 (ENSCARG00000069789)	vac14 (ENSCARG00000069823)	galnt18a (ENSCARG00000069901)
Zebrafish	MODERN SPECIES	17	furinb (ENSDARG00000070971)	MAN2A2 (ENSDARG00000063101)	unc45a (ENSDARG00000103643)	gdpgp1 (ENSDARG00000097155)	rhcgb (ENSDARG00000100265)	POLG (ENSDARG00000060951)	fanci (ENSDARG00000026224)	ENSDARG00000058556	ENSDARG00000070331	ENSDARG00000078994	ENSDARG00000100621	saal1 (ENSDARG00000018681)	tph1a (ENSDARG00000029432)	SERGEF (ENSDARG00000070986)	kcnc1b (ENSDARG00000032959)	dhtkd1 (ENSDARG00000016415) #22	camk1db (ENSDARG00000017446) #23	ucmab (ENSDARG00000005485) #24	hal (ENSDARG00000017444) #27	NOX5 (ENSDARG00000079773)	glcea (ENSDARG00000005095)	ambra1b (ENSDARG00000039878)	ENSDARG00000017722	mdkb (ENSDARG00000020708)	DGKZ (ENSDARG00000076025)	PHF21A (ENSDARG00000021378)	PRDM11 (ENSDARG00000074468)	ENSDARG00000089255	kcnj11l (ENSDARG00000031438)	bet1l (ENSDARG00000032037)	arpp19b (ENSDARG00000039880)
Osteoglossiformes	ANCESTRAL SPECIES	138	ENSGT01060000250792	ENSGT00790000123099.d	ENSGT00950000182835.d.b.e	ENSGT00940000157638.b	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317.d	ENSGT00710000106806.j #20	ENSGT00940000159247.b	ENSGT00940000155461.E.j #21	ENSGT00940000155461.A ##21	ENSGT00940000156715.t	ENSGT00940000157926	ENSGT01030000235060.a	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00940000154045.a	ENSGT00940000155486.a	ENSGT00940000158917.a	ENSGT00950000183146.a.a
P. kingsleyae	MODERN SPECIES	91	ENSPKIG00000025528	ENSPKIG00000025527	rbm17 (ENSPKIG00000025526)	pfkfb3 (ENSPKIG00000025525)	prkcq (ENSPKIG00000025524)	ENSPKIG00000025522	tmem110l (ENSPKIG00000025521)	ITIH5 (ENSPKIG00000025518)	taf3 (ENSPKIG00000025517) #20	gata3 (ENSPKIG00000025515)	ENSPKIG00000025513 ##21	ENSPKIG00000025510	ECHDC3 (ENSPKIG00000025507)	ENSPKIG00000025505	UPF2 (ENSPKIG00000025502)	dhtkd1 (ENSPKIG00000025500) #22	nudt5 (ENSPKIG00000025499)	slc38a2 (ENSPKIG00000025498)	slc38a4 (ENSPKIG00000025494)	AMIGO2 (ENSPKIG00000025493)	ENSPKIG00000025491	RASSF8 (ENSPKIG00000025490)	bhlhe41 (ENSPKIG00000025488)	plekhg7 (ENSPKIG00000025485)	EEA1 (ENSPKIG00000025472)	nudt4b (ENSPKIG00000025462)	ENSPKIG00000025460	mrpl42 (ENSPKIG00000025457)	pwp1 (ENSPKIG00000025455)	ANO6 (ENSPKIG00000025449)	ENSPKIG00000025440
Asian bonytongue	MODERN SPECIES	11	ENSSFOG00015023852	ENSSFOG00015031773	pfkfb3 (ENSSFOG00015023848)	prkcq (ENSSFOG00015023840)	SFMBT2 (ENSSFOG00015023835)	tmem110l (ENSSFOG00015023833)	ITIH5 (ENSSFOG00015023830)	ENSSFOG00015023828	gata3 (ENSSFOG00015026432)	CELF2 (ENSSFOG00015023817) #21	ENSSFOG00015023803	ECHDC3 (ENSSFOG00015023801)	ENSSFOG00015030169	ENSSFOG00015023799	UPF2 (ENSSFOG00015023788)	dhtkd1 (ENSSFOG00015023776) #22	nudt5 (ENSSFOG00015032457)	slc38a2 (ENSSFOG00015023763)	slc38a4 (ENSSFOG00015023756)	AMIGO2 (ENSSFOG00015023750)	PTPRS (ENSSFOG00015018310)	ENSSFOG00015018298	tbxa2r (ENSSFOG00015018272)	gipc3 (ENSSFOG00015018248)	ENSSFOG00015018196	gpr35.1 (ENSSFOG00015018172)	lim2.2 (ENSSFOG00015018152)	ftsj3 (ENSSFOG00015018053)	mfn1b (ENSSFOG00015017937)	GNB4 (ENSSFOG00015017901)	actl6a (ENSSFOG00015024452)
Spotted gar	MODERN SPECIES	674	prkcq (ENSLOCG00000015666)	SFMBT2 (ENSLOCG00000015669)	tmem110l (ENSLOCG00000015671)	ITIH5 (ENSLOCG00000015674)	itih2 (ENSLOCG00000015677)	kin (ENSLOCG00000015679)	atp5f1c (ENSLOCG00000015681)	ENSLOCG00000015683 #20	gata3 (ENSLOCG00000015684)	ENSLOCG00000015686	ENSLOCG00000015689	CELF2 (ENSLOCG00000015690) #21	usp6nl (ENSLOCG00000015695)	ENSLOCG00000015697	UPF2 (ENSLOCG00000015698)	dhtkd1 (ENSLOCG00000015702) #22	SEC61A2 (ENSLOCG00000015709)	nudt5 (ENSLOCG00000015711)	cdc123 (ENSLOCG00000015714)	camk1da (ENSLOCG00000015716) #23	ccdc3a (ENSLOCG00000015717)	optn (ENSLOCG00000015719)	mcm10 (ENSLOCG00000015721)	ucmaa (ENSLOCG00000015722) #24	phyh (ENSLOCG00000015723)	cdk17 (ENSLOCG00000015727) #25	elk3 (ENSLOCG00000015730) #26	lta4h (ENSLOCG00000015731)	hal (ENSLOCG00000015734) #27	amdhd1 (ENSLOCG00000015737)	CCDC38 (ENSLOCG00000015742)
Reedfish	MODERN SPECIES		rbm17 (ENSECRG00000010259)	pfkfb3 (ENSECRG00000010215)	prkcq (ENSECRG00000010183)	SFMBT2 (ENSECRG00000010151)	tmem110l (ENSECRG00000010127)	ITIH5 (ENSECRG00000010114)	itih2 (ENSECRG00000010065)	kin (ENSECRG00000010028)	atp5f1c (ENSECRG00000010017)	gata3 (ENSECRG00000010007)	CELF2 (ENSECRG00000009961) #21	usp6nl (ENSECRG00000009913)	ECHDC3 (ENSECRG00000009884)	ENSECRG00000009871	UPF2 (ENSECRG00000009755)	dhtkd1 (ENSECRG00000009704) #22	SEC61A2 (ENSECRG00000009642)	nudt5 (ENSECRG00000009611)	cdc123 (ENSECRG00000009579)	camk1da (ENSECRG00000009539) #23	ccdc3a (ENSECRG00000009528)	ENSECRG00000009514	ENSECRG00000009508	optn (ENSECRG00000009491)	UCMA (ENSECRG00000009480) #24	ENSECRG00000007094	mcm10 (ENSECRG00000007069)	ENSECRG00000007048	UCMA (ENSECRG00000007037) #24	phyh (ENSECRG00000007025)	cdk17 (ENSECRG00000006988) #25
Sarcopterygii	ANCESTRAL SPECIES	58	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B
Tetrapoda	ANCESTRAL SPECIES	5	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Amniota	ANCESTRAL SPECIES	5	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000168430
Sauria	ANCESTRAL SPECIES	4	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000168430
Lepidosauria	ANCESTRAL SPECIES	67	ENSGT00940000169031	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00940000162660.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b	ENSGT00390000002793	ENSGT00940000167397.b	ENSGT00940000156039	ENSGT00390000007747	ENSGT00940000161014	ENSGT00950000182839.B.a.a	ENSGT00910000144343	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Episquamata	ANCESTRAL SPECIES	3	ENSGT01050000244951.a.a	ENSGT00940000169031	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00940000162660.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b	ENSGT00390000002793	ENSGT00940000156039	ENSGT00390000007747	ENSGT00940000161014	ENSGT00950000182839.B.a.a	ENSGT00910000144343	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Laterata	ANCESTRAL SPECIES	6	ENSGT00940000155209	ENSGT00940000153962.b	ENSGT00390000005178	ENSGT01050000244951.a.a.t.b	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b	ENSGT00390000002793	ENSGT00940000156039	ENSGT00390000007747	ENSGT00940000161014	ENSGT00950000182839.B.a.a	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Common wall lizard	MODERN SPECIES	1		ENSPMRG00000016540	ENSPMRG00000016543	ENSPMRG00000016546	ENSPMRG00000016548	SSPN (ENSPMRG00000016553)	ENSPMRG00000016560	ITPR2 (ENSPMRG00000010824)	ENSPMRG00000011334	BHLHE41 (ENSPMRG00000011338)	ENSPMRG00000011342	RASSF8 (ENSPMRG00000011345)	ENSPMRG00000011349	ENSPMRG00000011350	UPF2 (ENSPMRG00000011357)	DHTKD1 (ENSPMRG00000011371) #22	SEC61A2 (ENSPMRG00000011387)	NUDT5 (ENSPMRG00000011414)	CDC123 (ENSPMRG00000011420)	CAMK1D (ENSPMRG00000011425) #23	CCDC3 (ENSPMRG00000011430)	ENSPMRG00000011433	OPTN (ENSPMRG00000011435)	MCM10 (ENSPMRG00000011445)	UCMA (ENSPMRG00000011458) #24	PHYH (ENSPMRG00000011461)	SEPHS1 (ENSPMRG00000011470)	BEND7 (ENSPMRG00000011477)	ENSPMRG00000011482	PRPF18 (ENSPMRG00000011486)	FRMD4A (ENSPMRG00000011508)
Argentine black and white tegu	MODERN SPECIES	33	CYB5R3 (ENSSMRG00000012219)	REP15 (ENSSMRG00000012218)	PPFIBP1 (ENSSMRG00000012209)	BMAL2 (ENSSMRG00000012171)	STK38L (ENSSMRG00000012167)	MED21 (ENSSMRG00000012165)	TM7SF3 (ENSSMRG00000012162)	FGFR1OP2 (ENSSMRG00000012161)	INTS13 (ENSSMRG00000012157)	ITPR2 (ENSSMRG00000012153)	SSPN (ENSSMRG00000012143)	BHLHE41 (ENSSMRG00000012142)	ENSSMRG00000012141	RASSF8 (ENSSMRG00000012140)	UPF2 (ENSSMRG00000012056)	DHTKD1 (ENSSMRG00000012052) #22	SEC61A2 (ENSSMRG00000011978)	NUDT5 (ENSSMRG00000011972)	CDC123 (ENSSMRG00000011960)	CAMK1D (ENSSMRG00000011958) #23	CCDC3 (ENSSMRG00000011920)	OPTN (ENSSMRG00000011916)	MCM10 (ENSSMRG00000011915)	UCMA (ENSSMRG00000011913) #24	PHYH (ENSSMRG00000011910)	SEPHS1 (ENSSMRG00000011907)	BEND7 (ENSSMRG00000011906)	PRPF18 (ENSSMRG00000011905)	FRMD4A (ENSSMRG00000011904)	FAM107B (ENSSMRG00000011879)	CDNF (ENSSMRG00000011878)
Toxicofera	ANCESTRAL SPECIES	7	ENSGT00940000169031	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00940000162660.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b	ENSGT00390000002793	ENSGT00940000156039	ENSGT00390000007747	ENSGT00940000161014	ENSGT00940000153118.eb.o.a	ENSGT00950000182839.B.a.a	ENSGT00910000144343	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Elapidae	ANCESTRAL SPECIES	6	ENSGT00940000153962.b	ENSGT01050000244951.a.a	ENSGT00940000169031	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00940000162660.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b	ENSGT00390000002793	ENSGT00940000156039	ENSGT00390000007747	ENSGT00940000161014	ENSGT00950000182839.B.a.a	ENSGT00530000064318.g	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b	ENSGT00940000156380
Indian cobra	MODERN SPECIES	10	PPFIBP1 (ENSNNAG00000014912)	ENSNNAG00000014891	BMAL2 (ENSNNAG00000014829)	STK38L (ENSNNAG00000014806)	ENSNNAG00000014780	MED21 (ENSNNAG00000014770)	TM7SF3 (ENSNNAG00000014680)	FGFR1OP2 (ENSNNAG00000014662)	INTS13 (ENSNNAG00000014593)	ITPR2 (ENSNNAG00000013481)	SSPN (ENSNNAG00000013414)	BHLHE41 (ENSNNAG00000013363)	ENSNNAG00000013330	ENSNNAG00000013323	UPF2 (ENSNNAG00000013165)	DHTKD1 (ENSNNAG00000013083) #22	ENSNNAG00000012980	ENSNNAG00000012965	NUDT5 (ENSNNAG00000012942)	CDC123 (ENSNNAG00000012909)	CAMK1D (ENSNNAG00000012877) #23	CCDC3 (ENSNNAG00000012861)	OPTN (ENSNNAG00000012838)	ENSNNAG00000012818	PHYH (ENSNNAG00000012194)	SEPHS1 (ENSNNAG00000012129)	BEND7 (ENSNNAG00000012109)	PRPF18 (ENSNNAG00000012091)	FRMD4A (ENSNNAG00000011682)	FAM107B (ENSNNAG00000011643)	CDNF (ENSNNAG00000011610)
Elapidae_a	ANCESTRAL SPECIES	1	ENSGT00940000155209.w	ENSGT00940000153962.b	ENSGT01050000244951.a.a	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00940000162660.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b	ENSGT00390000002793	ENSGT00940000156039	ENSGT00390000007747.i	ENSGT00940000161014	ENSGT00950000182839.B.a.a	ENSGT00530000064318.g	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00940000158792	ENSGT00530000063868.b	ENSGT00390000013052	ENSGT00810000125439.B	ENSGT00950000183093.A.a	ENSGT00940000158969	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00960000189677	ENSGT00940000160716	ENSGT00940000155486
Acanthophiinae	ANCESTRAL SPECIES		ENSGT00940000153962.b	ENSGT01050000244951.a.a	ENSGT00940000160423	ENSGT00940000153544.b	ENSGT00940000162660.a	ENSGT00390000014557	ENSGT00390000008702	ENSGT00390000018003.b	ENSGT00390000002793	ENSGT00940000156039	ENSGT00390000007747.i	ENSGT00940000161014	ENSGT00950000182839.B.a.a	ENSGT00940000153118.eb.o.a	ENSGT00530000064318.g	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00940000158792	ENSGT00530000063868.b	ENSGT00390000013052	ENSGT00810000125439.B	ENSGT00950000183093.A.a	ENSGT00940000158969	ENSGT00390000016138	ENSGT00950000183205.b.a.b.a.b	ENSGT00960000189677	ENSGT00940000160716	ENSGT00940000155486
Eastern brown snake	MODERN SPECIES		CYB5R3 (ENSPTXG00000005034)	PPFIBP1 (ENSPTXG00000003384)	BMAL2 (ENSPTXG00000003362)	STK38L (ENSPTXG00000003358)	ENSPTXG00000003354	MED21 (ENSPTXG00000003352)	TM7SF3 (ENSPTXG00000003320)	FGFR1OP2 (ENSPTXG00000003315)	INTS13 (ENSPTXG00000003311)	ITPR2 (ENSPTXG00000001483)	SSPN (ENSPTXG00000001336)	BHLHE41 (ENSPTXG00000001334)	RASSF8 (ENSPTXG00000001331)	ENSPTXG00000001330	UPF2 (ENSPTXG00000001320)	DHTKD1 (ENSPTXG00000001318) #22	SEC61A2 (ENSPTXG00000001313)	NUDT5 (ENSPTXG00000001307)	CDC123 (ENSPTXG00000001304)	IRAK4 (ENSPTXG00000001301)	TWF1 (ENSPTXG00000001296)	TMEM117 (ENSPTXG00000001295)	NELL2 (ENSPTXG00000001276)	DBX2 (ENSPTXG00000001269)	ANO6 (ENSPTXG00000001262)	ARID2 (ENSPTXG00000001255)	SCAF11 (ENSPTXG00000001250)	SLC38A1 (ENSPTXG00000001242)	SLC38A2 (ENSPTXG00000001237)	SLC38A4 (ENSPTXG00000001234)	AMIGO2 (ENSPTXG00000001232)
Mainland tiger snake	MODERN SPECIES	20	CYB5R3 (ENSNSUG00000013035)	BMAL2 (ENSNSUG00000013032)	STK38L (ENSNSUG00000012807)	ENSNSUG00000012805	MED21 (ENSNSUG00000012804)	TM7SF3 (ENSNSUG00000012679)	FGFR1OP2 (ENSNSUG00000012678)	INTS13 (ENSNSUG00000012613)	ITPR2 (ENSNSUG00000008088)	ENSNSUG00000008086	ENSNSUG00000008085	RASSF8 (ENSNSUG00000008084)	ENSNSUG00000008083	ENSNSUG00000008082	ENSNSUG00000008081	DHTKD1 (ENSNSUG00000007533) #22	SEC61A2 (ENSNSUG00000007009)	ENSNSUG00000007006	NUDT5 (ENSNSUG00000007005)	CDC123 (ENSNSUG00000006986)	CAMK1D (ENSNSUG00000006982) #23	IRAK4 (ENSNSUG00000006981)	TMEM117 (ENSNSUG00000006977)	NELL2 (ENSNSUG00000006975)	DBX2 (ENSNSUG00000006974)	ANO6 (ENSNSUG00000006973)	ENSNSUG00000006972	ENSNSUG00000006971	SCAF11 (ENSNSUG00000006970)	ENSNSUG00000006969	SLC38A1 (ENSNSUG00000006953)
Blue-lipped sea krait	MODERN SPECIES	3234														ZNF592 (ENSLLTG00000016759)	ALPK3 (ENSLLTG00000016757)	DHTKD1 (ENSLLTG00000015817) #22
Lizard	MODERN SPECIES	963										BHLHE41 (ENSACAG00000036732)	ENSACAG00000038058	ENSACAG00000000388	ENSACAG00000000376	UPF2 (ENSACAG00000009259)	ENSACAG00000029004	DHTKD1 (ENSACAG00000009148) #22	NUDT5 (ENSACAG00000009104)	CDC123 (ENSACAG00000009021)	CAMK1D (ENSACAG00000008979) #23	CCDC3 (ENSACAG00000001378)
tuatara	MODERN SPECIES	1359														RASSF8 (ENSSPUG00000014442)	UPF2 (ENSSPUG00000014544)	DHTKD1 (ENSSPUG00000014905) #22	ENSSPUG00000014932	ENSSPUG00000014945	NUDT5 (ENSSPUG00000014962)	CDC123 (ENSSPUG00000014984)	CAMK1D (ENSSPUG00000015020) #23	CCDC3 (ENSSPUG00000015057)	OPTN (ENSSPUG00000015082)	MCM10 (ENSSPUG00000015138)	UCMA (ENSSPUG00000015229) #24
Archelosauria	ANCESTRAL SPECIES	3	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000168430
Archosauria	ANCESTRAL SPECIES	4	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b	ENSGT00940000156380
Aves	ANCESTRAL SPECIES	1	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000168430	ENSGT00390000007160.a.b
Neognathae	ANCESTRAL SPECIES	3	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000168430	ENSGT00940000156380
Galloanserae	ANCESTRAL SPECIES	3	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000168430	ENSGT00940000156380
Phasianidae	ANCESTRAL SPECIES		ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000168430	ENSGT00940000156380
Japanese quail	MODERN SPECIES		PFKFB3 (ENSCJPG00005004174)	PRKCQ (ENSCJPG00005004179)	SFMBT2 (ENSCJPG00005004196)	ENSCJPG00005004202	ITIH5 (ENSCJPG00005004205)	ITIH2 (ENSCJPG00005004214)	KIN (ENSCJPG00005004216)	ATP5F1C (ENSCJPG00005004221)	TAF3 (ENSCJPG00005004223) #20	GATA3 (ENSCJPG00005004226)	CELF2 (ENSCJPG00005004245) #21	USP6NL (ENSCJPG00005004251)	ECHDC3 (ENSCJPG00005004257)	PROSER2 (ENSCJPG00005004259)	UPF2 (ENSCJPG00005004260)	DHTKD1 (ENSCJPG00005004273) #22	SEC61A2 (ENSCJPG00005004471)	NUDT5 (ENSCJPG00005004472)	CDC123 (ENSCJPG00005004475)	CAMK1D (ENSCJPG00005004517) #23	CCDC3 (ENSCJPG00005004519)	OPTN (ENSCJPG00005004520)	MCM10 (ENSCJPG00005004521)	PHYH (ENSCJPG00005004524)	SEPHS1 (ENSCJPG00005004635)	BEND7 (ENSCJPG00005004636)	PRPF18 (ENSCJPG00005004637)	FRMD4A (ENSCJPG00005004644)	FAM107B (ENSCJPG00005004650)	ENSCJPG00005004677	HSPA14 (ENSCJPG00005004679)
Phasianidae_b	ANCESTRAL SPECIES	9	ENSGT00940000157638	ENSGT00950000182865.b.b.b.c.a.i.a.b.a	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000156380	ENSGT00940000156788
Chicken	MODERN SPECIES		ENSGALG00010005239	ENSGALG00010007850	ENSGALG00010005254	ENSGALG00010007857	ITIH5 (ENSGALG00010005258)	ITIH2 (ENSGALG00010005264)	KIN (ENSGALG00010005269)	ATP5C1 (ENSGALG00010005283)	TAF3 (ENSGALG00010005292) #20	GATA3 (ENSGALG00010005232)	CELF2 (ENSGALG00010005619) #21	USP6NL (ENSGALG00010005651)	ECHDC3 (ENSGALG00010005705)	PROSER2 (ENSGALG00010005724)	UPF2 (ENSGALG00010005814)	DHTKD1 (ENSGALG00010007883) #22	SEC61A2 (ENSGALG00010005831)	NUDT5 (ENSGALG00010005926)	CDC123 (ENSGALG00010006015)	CAMK1D (ENSGALG00010005360) #23	CCDC3 (ENSGALG00010005368)	OPTN (ENSGALG00010005383)	MCM10 (ENSGALG00010005389)	PHYH (ENSGALG00010005394)	SEPHS1 (ENSGALG00010005398)	BEND7 (ENSGALG00010005404)	PRPF18 (ENSGALG00010005699)	FRMD4A (ENSGALG00010005800)	FAM107B (ENSGALG00010005879)	HSPA14 (ENSGALG00010005964)	SUV39H2 (ENSGALG00010005979)
Turkey	MODERN SPECIES		ENSMGAG00000021742	ENSMGAG00000007564	ENSMGAG00000007550	ENSMGAG00000018951	ENSMGAG00000021044	GRAMD4 (ENSMGAG00000007665)	ENSMGAG00000007700	ENSMGAG00000007731	ENSMGAG00000018229	ENSMGAG00000003794	CELF2 (ENSMGAG00000004551) #21	USP6NL (ENSMGAG00000004520)	ECHDC3 (ENSMGAG00000004565)	PROSER2 (ENSMGAG00000004614)	UPF2 (ENSMGAG00000004573)	DHTKD1 (ENSMGAG00000004700) #22	SEC61A2 (ENSMGAG00000004679)	NUDT5 (ENSMGAG00000004627)	CDC123 (ENSMGAG00000004618)	CAMK1D (ENSMGAG00000004740) #23	CCDC3 (ENSMGAG00000004919)	OPTN (ENSMGAG00000004793)	MCM10 (ENSMGAG00000004763)	PHYH (ENSMGAG00000004924)	SEPHS1 (ENSMGAG00000004862)	ENSMGAG00000004840	PRPF18 (ENSMGAG00000005023)	FRMD4A (ENSMGAG00000004946)	FAM107B (ENSMGAG00000005048)	HSPA14 (ENSMGAG00000005123)	SUV39H2 (ENSMGAG00000005108)
Anatidae	ANCESTRAL SPECIES	28	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000168430	ENSGT00940000156380
Pink-footed goose	MODERN SPECIES	6	PRKCQ (ENSABRG00000012740)	SFMBT2 (ENSABRG00000012760)	ENSABRG00000012807	ITIH5 (ENSABRG00000012816)	ITIH2 (ENSABRG00000012915)	KIN (ENSABRG00000013601)	ATP5F1C (ENSABRG00000013613)	TAF3 (ENSABRG00000013621) #20	GATA3 (ENSABRG00000013625)	ENSABRG00000013637	CELF2 (ENSABRG00000013668) #21	USP6NL (ENSABRG00000013711)	ECHDC3 (ENSABRG00000013718)	PROSER2 (ENSABRG00000013722)	UPF2 (ENSABRG00000013732)	DHTKD1 (ENSABRG00000013791) #22	SEC61A2 (ENSABRG00000013810)	NUDT5 (ENSABRG00000013816)	CDC123 (ENSABRG00000013820)	CAMK1D (ENSABRG00000013829) #23	CCDC3 (ENSABRG00000013843)	OPTN (ENSABRG00000013847)	MCM10 (ENSABRG00000013868)	PHYH (ENSABRG00000013890)	SEPHS1 (ENSABRG00000013896)	BEND7 (ENSABRG00000013910)	PRPF18 (ENSABRG00000013921)	FRMD4A (ENSABRG00000013927)	FAM107B (ENSABRG00000013950)	HSPA14 (ENSABRG00000013965)	SUV39H2 (ENSABRG00000013970)
Duck	MODERN SPECIES		PFKFB3 (ENSAPLG00000004459)	PRKCQ (ENSAPLG00000013073)	SFMBT2 (ENSAPLG00000012668)	ENSAPLG00000014632	ITIH5 (ENSAPLG00000014292)	ITIH2 (ENSAPLG00000008497)	KIN (ENSAPLG00000008247)	ATP5F1C (ENSAPLG00000007987)	TAF3 (ENSAPLG00000010030) #20	GATA3 (ENSAPLG00000010046)	CELF2 (ENSAPLG00000010064) #21	USP6NL (ENSAPLG00000010144)	ECHDC3 (ENSAPLG00000010259)	PROSER2 (ENSAPLG00000027360)	UPF2 (ENSAPLG00000010287)	DHTKD1 (ENSAPLG00000010342) #22	SEC61A2 (ENSAPLG00000005921)	NUDT5 (ENSAPLG00000005616)	CDC123 (ENSAPLG00000005383)	CAMK1D (ENSAPLG00000005323) #23	OPTN (ENSAPLG00000004645)	MCM10 (ENSAPLG00000004340)	PHYH (ENSAPLG00000004121)	SEPHS1 (ENSAPLG00000003830)	BEND7 (ENSAPLG00000003779)	PRPF18 (ENSAPLG00000003387)	ENSAPLG00000023557	FAM107B (ENSAPLG00000002518)	ENSAPLG00000027867	HSPA14 (ENSAPLG00000006261)	SUV39H2 (ENSAPLG00000006124)
Neognathae_b	ANCESTRAL SPECIES	2	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000156380	ENSGT00940000156788
Neognathae_c	ANCESTRAL SPECIES		ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000156380	ENSGT00940000156788
Golden eagle	MODERN SPECIES	21	PRKCQ (ENSACCG00020003419)	SFMBT2 (ENSACCG00020003446)	ENSACCG00020003475	ITIH5 (ENSACCG00020003496)	ITIH2 (ENSACCG00020003517)	KIN (ENSACCG00020003554)	ATP5F1C (ENSACCG00020003589)	ENSACCG00020003620	TAF3 (ENSACCG00020003636) #20	GATA3 (ENSACCG00020003651)	CELF2 (ENSACCG00020003671) #21	USP6NL (ENSACCG00020003698)	ECHDC3 (ENSACCG00020003733)	PROSER2 (ENSACCG00020003744)	UPF2 (ENSACCG00020003765)	DHTKD1 (ENSACCG00020003794) #22	SEC61A2 (ENSACCG00020003834)	NUDT5 (ENSACCG00020003857)	CDC123 (ENSACCG00020003875)	CAMK1D (ENSACCG00020003893) #23	CCDC3 (ENSACCG00020003923)	OPTN (ENSACCG00020003947)	MCM10 (ENSACCG00020003969)	PHYH (ENSACCG00020003997)	SEPHS1 (ENSACCG00020004020)	BEND7 (ENSACCG00020004029)	PRPF18 (ENSACCG00020004045)	FRMD4A (ENSACCG00020004072)	FAM107B (ENSACCG00020006052)	HSPA14 (ENSACCG00020006069)	SUV39H2 (ENSACCG00020006085)
Kakapo	MODERN SPECIES	20	PRKCQ (ENSSHBG00005002656)	SFMBT2 (ENSSHBG00005004160)	ENSSHBG00005004180	ENSSHBG00005004188	ITIH5 (ENSSHBG00005004216)	ITIH2 (ENSSHBG00005004304)	KIN (ENSSHBG00005004314)	ATP5F1C (ENSSHBG00005004320)	TAF3 (ENSSHBG00005004328) #20	GATA3 (ENSSHBG00005004332)	CELF2 (ENSSHBG00005004349) #21	USP6NL (ENSSHBG00005004369)	ECHDC3 (ENSSHBG00005004379)	PROSER2 (ENSSHBG00005004394)	UPF2 (ENSSHBG00005004402)	DHTKD1 (ENSSHBG00005004417) #22	SEC61A2 (ENSSHBG00005004426)	NUDT5 (ENSSHBG00005004431)	CDC123 (ENSSHBG00005004439)	CAMK1D (ENSSHBG00005004444) #23	CCDC3 (ENSSHBG00005004452)	OPTN (ENSSHBG00005004458)	MCM10 (ENSSHBG00005004474)	PHYH (ENSSHBG00005004485)	SEPHS1 (ENSSHBG00005004488)	BEND7 (ENSSHBG00005004494)	PRPF18 (ENSSHBG00005004517)	FRMD4A (ENSSHBG00005004533)	FAM107B (ENSSHBG00005004552)	HSPA14 (ENSSHBG00005004564)	SUV39H2 (ENSSHBG00005004576)
Passeriformes	ANCESTRAL SPECIES	3	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903.a	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000156380	ENSGT00940000156788
Great tit	MODERN SPECIES	10	ENSPMJG00000000950	ITIH5 (ENSPMJG00000000957)	ITIH2 (ENSPMJG00000000968)	ENSPMJG00000000981	ATP5F1C (ENSPMJG00000000993)	TAF3 (ENSPMJG00000001003) #20	GATA3 (ENSPMJG00000001023)	CELF2 (ENSPMJG00000001189) #21	ENSPMJG00000001251	ENSPMJG00000001258	USP6NL (ENSPMJG00000001266)	ENSPMJG00000001326	ECHDC3 (ENSPMJG00000001332)	PROSER2 (ENSPMJG00000001340)	UPF2 (ENSPMJG00000001352)	DHTKD1 (ENSPMJG00000001398) #22	SEC61A2 (ENSPMJG00000001428)	NUDT5 (ENSPMJG00000001442)	CDC123 (ENSPMJG00000001458)	CAMK1D (ENSPMJG00000001549) #23	CCDC3 (ENSPMJG00000001553)	OPTN (ENSPMJG00000001627)	MCM10 (ENSPMJG00000001633)	PHYH (ENSPMJG00000001654)	SEPHS1 (ENSPMJG00000001657)	BEND7 (ENSPMJG00000001661)	PRPF18 (ENSPMJG00000001770)	ENSPMJG00000001785	ENSPMJG00000001805	FAM107B (ENSPMJG00000001851)	HSPA14 (ENSPMJG00000001887)
Passeriformes_d	ANCESTRAL SPECIES	3	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903.a	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000156380	ENSGT00940000156788
Passeriformes_g	ANCESTRAL SPECIES	4	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903.a	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000156380	ENSGT00940000156788
Passeroidea	ANCESTRAL SPECIES	3	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903.a	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000156380	ENSGT00940000156788
Common canary	MODERN SPECIES	6	UBE2H (ENSSCAG00000009877)	SFMBT2 (ENSSCAG00000009795)	ENSSCAG00000009774	ITIH5 (ENSSCAG00000009767)	ITIH2 (ENSSCAG00000009756)	ENSSCAG00000009746	ATP5F1C (ENSSCAG00000009740)	TAF3 (ENSSCAG00000009731) #20	GATA3 (ENSSCAG00000009719)	CELF2 (ENSSCAG00000009699) #21	ENSSCAG00000009685	USP6NL (ENSSCAG00000009675)	ECHDC3 (ENSSCAG00000009664)	PROSER2 (ENSSCAG00000009660)	UPF2 (ENSSCAG00000009653)	DHTKD1 (ENSSCAG00000009647) #22	SEC61A2 (ENSSCAG00000009638)	NUDT5 (ENSSCAG00000009633)	CDC123 (ENSSCAG00000009626)	CAMK1D (ENSSCAG00000009616) #23	CCDC3 (ENSSCAG00000009610)	OPTN (ENSSCAG00000009603)	MCM10 (ENSSCAG00000009596)	PHYH (ENSSCAG00000009587)	SEPHS1 (ENSSCAG00000009583)	ENSSCAG00000009575	PRPF18 (ENSSCAG00000009557)	FRMD4A (ENSSCAG00000009530)	FAM107B (ENSSCAG00000009497)	HSPA14 (ENSSCAG00000009459)	SUV39H2 (ENSSCAG00000009456)
Zebra finch	MODERN SPECIES	11	PRKCQ (ENSTGUG00000002037)	ENSTGUG00000008624	SFMBT2 (ENSTGUG00000002052)	ENSTGUG00000002074	ITIH5 (ENSTGUG00000002077)	ITIH2 (ENSTGUG00000002088)	ENSTGUG00000002119	ATP5F1C (ENSTGUG00000002123)	TAF3 (ENSTGUG00000002128) #20	GATA3 (ENSTGUG00000002134)	CELF2 (ENSTGUG00000002136) #21	USP6NL (ENSTGUG00000002142)	ECHDC3 (ENSTGUG00000002150)	PROSER2 (ENSTGUG00000002158)	UPF2 (ENSTGUG00000002163)	DHTKD1 (ENSTGUG00000002175) #22	SEC61A2 (ENSTGUG00000002185)	NUDT5 (ENSTGUG00000002198)	CDC123 (ENSTGUG00000002204)	CAMK1D (ENSTGUG00000020240) #23	CCDC3 (ENSTGUG00000002240)	OPTN (ENSTGUG00000002243)	MCM10 (ENSTGUG00000002254)	PHYH (ENSTGUG00000002270)	SEPHS1 (ENSTGUG00000002278)	BEND7 (ENSTGUG00000002282)	PRPF18 (ENSTGUG00000002286)	FRMD4A (ENSTGUG00000002298)	ENSTGUG00000018791	FAM107B (ENSTGUG00000022507)	HSPA14 (ENSTGUG00000002324)
Medium ground finch	MODERN SPECIES	112												USP6NL (ENSGFOG00000008045)	ECHDC3 (ENSGFOG00000008082)	PROSER2 (ENSGFOG00000008115)	UPF2 (ENSGFOG00000008118)	DHTKD1 (ENSGFOG00000008130) #22	SEC61A2 (ENSGFOG00000008149)	NUDT5 (ENSGFOG00000008280)	CDC123 (ENSGFOG00000008294)	CAMK1D (ENSGFOG00000008456) #23	CCDC3 (ENSGFOG00000008550)	OPTN (ENSGFOG00000008556)	MCM10 (ENSGFOG00000008768)	PHYH (ENSGFOG00000008782)	SEPHS1 (ENSGFOG00000008817)	BEND7 (ENSGFOG00000008824)	PRPF18 (ENSGFOG00000008828)	FRMD4A (ENSGFOG00000008837)	ENSGFOG00000008841	FAM107B (ENSGFOG00000008846)	HSPA14 (ENSGFOG00000008850)
Flycatcher	MODERN SPECIES	10	PRKCQ (ENSFALG00000001793)	SFMBT2 (ENSFALG00000001796)	ENSFALG00000001804	ITIH5 (ENSFALG00000001811)	ITIH2 (ENSFALG00000001817)	KIN (ENSFALG00000024087)	ATP5F1C (ENSFALG00000001861)	TAF3 (ENSFALG00000001866) #20	GATA3 (ENSFALG00000001869)	CELF2 (ENSFALG00000001873) #21	ENSFALG00000026377	USP6NL (ENSFALG00000026804)	ECHDC3 (ENSFALG00000001883)	PROSER2 (ENSFALG00000023953)	UPF2 (ENSFALG00000001889)	DHTKD1 (ENSFALG00000001894) #22	SEC61A2 (ENSFALG00000001897)	NUDT5 (ENSFALG00000001898)	CDC123 (ENSFALG00000025654)	CAMK1D (ENSFALG00000026842) #23	CCDC3 (ENSFALG00000001903)	OPTN (ENSFALG00000001906)	MCM10 (ENSFALG00000001907)	PHYH (ENSFALG00000001909)	SEPHS1 (ENSFALG00000001910)	BEND7 (ENSFALG00000001911)	PRPF18 (ENSFALG00000001912)	FRMD4A (ENSFALG00000001916)	FAM107B (ENSFALG00000001924)	HSPA14 (ENSFALG00000001925)	SUV39H2 (ENSFALG00000001926)
African ostrich	MODERN SPECIES	892								GATA3 (ENSSCUG00000013423)	ENSSCUG00000013420	CELF2 (ENSSCUG00000013411) #21	ENSSCUG00000013409	USP6NL (ENSSCUG00000013407)	ECHDC3 (ENSSCUG00000013403)	PROSER2 (ENSSCUG00000013401)	UPF2 (ENSSCUG00000013398)	DHTKD1 (ENSSCUG00000013394) #22	SEC61A2 (ENSSCUG00000013388)	NUDT5 (ENSSCUG00000013379)	CDC123 (ENSSCUG00000013377)	CAMK1D (ENSSCUG00000013376) #23	CCDC3 (ENSSCUG00000013374)	ENSSCUG00000013372
Australian saltwater crocodile	MODERN SPECIES	49	PRKCQ (ENSCPRG00005001324)	SFMBT2 (ENSCPRG00005001295)	ENSCPRG00005001265	ITIH5 (ENSCPRG00005001230)	ITIH2 (ENSCPRG00005001158)	KIN (ENSCPRG00005001137)	ATP5F1C (ENSCPRG00005001119)	TAF3 (ENSCPRG00005001115) #20	GATA3 (ENSCPRG00005001081)	CELF2 (ENSCPRG00005001018) #21	ENSCPRG00005001013	USP6NL (ENSCPRG00005000950)	ECHDC3 (ENSCPRG00005000889)	PROSER2 (ENSCPRG00005000883)	UPF2 (ENSCPRG00005000823)	DHTKD1 (ENSCPRG00005000815) #22	SEC61A2 (ENSCPRG00005000751)	NUDT5 (ENSCPRG00005000735)	CDC123 (ENSCPRG00005000731)	CAMK1D (ENSCPRG00005000727) #23	CCDC3 (ENSCPRG00005000622)	OPTN (ENSCPRG00005000560)	PHYH (ENSCPRG00005000544)	MCM10 (ENSCPRG00005000535)	UCMA (ENSCPRG00005000528) #24	SEPHS1 (ENSCPRG00005000489)	ENSCPRG00005000481	PRPF18 (ENSCPRG00005000467)	FRMD4A (ENSCPRG00005000413)	FAM107B (ENSCPRG00005000306)	CDNF (ENSCPRG00005000264)
Cryptodira	ANCESTRAL SPECIES	11	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Emydidae	ANCESTRAL SPECIES	53	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Three-toed box turtle	MODERN SPECIES	28	PFKFB3 (ENSTMTG00000009998)	PRKCQ (ENSTMTG00000010498)	SFMBT2 (ENSTMTG00000010581)	ENSTMTG00000010641	ITIH5 (ENSTMTG00000010697)	ITIH2 (ENSTMTG00000010759)	KIN (ENSTMTG00000010910)	ATP5F1C (ENSTMTG00000010951)	TAF3 (ENSTMTG00000011008) #20	GATA3 (ENSTMTG00000011024)	CELF2 (ENSTMTG00000011086) #21	USP6NL (ENSTMTG00000011310)	ECHDC3 (ENSTMTG00000011364)	PROSER2 (ENSTMTG00000011375)	UPF2 (ENSTMTG00000011388)	DHTKD1 (ENSTMTG00000011453) #22	ENSTMTG00000011490	ENSTMTG00000011519	NUDT5 (ENSTMTG00000011524)	CDC123 (ENSTMTG00000011558)	CAMK1D (ENSTMTG00000011571) #23	ENSTMTG00000011636	CCDC3 (ENSTMTG00000011648)	OPTN (ENSTMTG00000000083)	MCM10 (ENSTMTG00000000112)	UCMA (ENSTMTG00000000140) #24	PHYH (ENSTMTG00000000163)	SEPHS1 (ENSTMTG00000000191)	BEND7 (ENSTMTG00000000216)	PRPF18 (ENSTMTG00000000231)	FRMD4A (ENSTMTG00000000257)
painted turtle	MODERN SPECIES	793											CELF2 (ENSCPBG00000027840) #21	USP6NL (ENSCPBG00000027832)	ECHDC3 (ENSCPBG00000027831)	PROSER2 (ENSCPBG00000027828)	UPF2 (ENSCPBG00000027823)	DHTKD1 (ENSCPBG00000027819) #22	SEC61A2 (ENSCPBG00000027816)	NUDT5 (ENSCPBG00000027814)	CDC123 (ENSCPBG00000027813)	CAMK1D (ENSCPBG00000027811) #23	CCDC3 (ENSCPBG00000027810)	OPTN (ENSCPBG00000027808)	MCM10 (ENSCPBG00000027807)	UCMA (ENSCPBG00000027806) #24	PHYH (ENSCPBG00000027805)	SEPHS1 (ENSCPBG00000027804)
Testudinidae	ANCESTRAL SPECIES	12	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00390000009272.q	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Abingdon island giant tortoise	MODERN SPECIES	2031													ENSCABG00000019608	PROSER2 (ENSCABG00000019606)	UPF2 (ENSCABG00000019601)	DHTKD1 (ENSCABG00000019554) #22	ENSCABG00000019548	ENSCABG00000019545	NUDT5 (ENSCABG00000019542)	CDC123 (ENSCABG00000019473)	ENSCABG00000019469	CAMK1D (ENSCABG00000019466) #23	CCDC3 (ENSCABG00000019463)	OPTN (ENSCABG00000019459)	MCM10 (ENSCABG00000019454)	ENSCABG00000019408	UCMA (ENSCABG00000019404) #24	ENSCABG00000019401
Goode s thornscrub tortoise	MODERN SPECIES		PFKFB3 (ENSGEVG00005004931)	PRKCQ (ENSGEVG00005004881)	SFMBT2 (ENSGEVG00005004815)	ENSGEVG00005004758	ITIH5 (ENSGEVG00005004630)	ITIH2 (ENSGEVG00005004328)	KIN (ENSGEVG00005004235)	ATP5F1C (ENSGEVG00005004195)	TAF3 (ENSGEVG00005004183) #20	GATA3 (ENSGEVG00005004168)	CELF2 (ENSGEVG00005004137) #21	USP6NL (ENSGEVG00005004081)	ECHDC3 (ENSGEVG00005004040)	PROSER2 (ENSGEVG00005004027)	UPF2 (ENSGEVG00005004004)	DHTKD1 (ENSGEVG00005003917) #22	SEC61A2 (ENSGEVG00005003856)	NUDT5 (ENSGEVG00005003845)	CDC123 (ENSGEVG00005003831)	ENSGEVG00005003824	ENSGEVG00005003819	CAMK1D (ENSGEVG00005003804) #23	CCDC3 (ENSGEVG00005003789)	OPTN (ENSGEVG00005003776)	MCM10 (ENSGEVG00005003755)	ENSGEVG00005003693	UCMA (ENSGEVG00005003658) #24	ENSGEVG00005003640	SEPHS1 (ENSGEVG00005003629)	BEND7 (ENSGEVG00005006623)	PRPF18 (ENSGEVG00005006559)
Chinese turtle	MODERN SPECIES	626														PROSER2 (ENSPSIG00000015147)	UPF2 (ENSPSIG00000015158)	DHTKD1 (ENSPSIG00000015194) #22	SEC61A2 (ENSPSIG00000015455)	NUDT5 (ENSPSIG00000015461)	CDC123 (ENSPSIG00000015507)	CAMK1D (ENSPSIG00000015669) #23	ENSPSIG00000015743	CCDC3 (ENSPSIG00000015767)	OPTN (ENSPSIG00000015775)	MCM10 (ENSPSIG00000015863)	UCMA (ENSPSIG00000015878) #24	PHYH (ENSPSIG00000015885)	SEPHS1 (ENSPSIG00000015980)	BEND7 (ENSPSIG00000016036)	ENSPSIG00000016044	PRPF18 (ENSPSIG00000016064)	FRMD4A (ENSPSIG00000016124)
Mammalia	ANCESTRAL SPECIES	20	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000168430
Theria	ANCESTRAL SPECIES		ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000168430
Marsupialia	ANCESTRAL SPECIES	4	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000164454.g	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Marsupialia_b	ANCESTRAL SPECIES	12	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000164454.g	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Diprotodontia	ANCESTRAL SPECIES	16	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000164454.g	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Diprotodontia_a	ANCESTRAL SPECIES	18	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000164454.g	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
koala	MODERN SPECIES	77								CELF2 (ENSPCIG00000003025) #21	ENSPCIG00000003839	USP6NL (ENSPCIG00000026215)	ECHDC3 (ENSPCIG00000012518)	ENSPCIG00000006666	ENSPCIG00000030662	ENSPCIG00000006656	ENSPCIG00000037178	DHTKD1 (ENSPCIG00000006647) #22	SEC61A2 (ENSPCIG00000006644)	NUDT5 (ENSPCIG00000006637)	CDC123 (ENSPCIG00000006629)	CAMK1D (ENSPCIG00000006626) #23	CCDC3 (ENSPCIG00000035033)	OPTN (ENSPCIG00000006619)	MCM10 (ENSPCIG00000006612)	UCMA (ENSPCIG00000006610) #24	PHYH (ENSPCIG00000006607)	SEPHS1 (ENSPCIG00000006605)	BEND7 (ENSPCIG00000006593)	PRPF18 (ENSPCIG00000012963)	FRMD4A (ENSPCIG00000006587)	ENSPCIG00000023215	ENSPCIG00000023216
Common wonbat	MODERN SPECIES	1064	ENSVURG00010014550	ITIH5 (ENSVURG00010014526)	ITIH2 (ENSVURG00010014510)	KIN (ENSVURG00010014473)	ENSVURG00010014444	TAF3 (ENSVURG00010014417) #20	GATA3 (ENSVURG00010014394)	ENSVURG00010014377	ENSVURG00010014355	CELF2 (ENSVURG00010014247) #21	ENSVURG00010014201	USP6NL (ENSVURG00010014183)	ECHDC3 (ENSVURG00010014167)	ENSVURG00010014151	UPF2 (ENSVURG00010014116)	DHTKD1 (ENSVURG00010014075) #22	SEC61A2 (ENSVURG00010014023)	NUDT5 (ENSVURG00010014004)	CDC123 (ENSVURG00010013980)	CAMK1D (ENSVURG00010013959) #23	CCDC3 (ENSVURG00010013944)	OPTN (ENSVURG00010013929)	MCM10 (ENSVURG00010013915)	UCMA (ENSVURG00010013901) #24	PHYH (ENSVURG00010013888)	BEND7 (ENSVURG00010013875)	ENSVURG00010013864	PRPF18 (ENSVURG00010013854)	FRMD4A (ENSVURG00010013819)	ENSVURG00010013807	CDNF (ENSVURG00010013801)
Wallaby	MODERN SPECIES	8761																DHTKD1 (ENSMEUG00000002942) #22
Tasmanian devil	MODERN SPECIES	4	ITIH5 (ENSSHAG00000017819)	ITIH2 (ENSSHAG00000017960)	KIN (ENSSHAG00000018030)	ATP5F1C (ENSSHAG00000018089)	TAF3 (ENSSHAG00000025039) #20	GATA3 (ENSSHAG00000018350)	ENSSHAG00000004546	ENSSHAG00000027405	ENSSHAG00000027809	ENSSHAG00000032190	CELF2 (ENSSHAG00000025193) #21	USP6NL (ENSSHAG00000015177)	ECHDC3 (ENSSHAG00000002567)	ENSSHAG00000005263	UPF2 (ENSSHAG00000008096)	DHTKD1 (ENSSHAG00000008531) #22	SEC61A2 (ENSSHAG00000009180)	CDC123 (ENSSHAG00000009806)	NUDT5 (ENSSHAG00000027888)	ENSSHAG00000023681	CAMK1D (ENSSHAG00000013190) #23	ENSSHAG00000028637	OPTN (ENSSHAG00000014689)	MCM10 (ENSSHAG00000014811)	UCMA (ENSSHAG00000014962) #24	PHYH (ENSSHAG00000015098)	SEPHS1 (ENSSHAG00000015286)	BEND7 (ENSSHAG00000016065)	ENSSHAG00000030316	PRPF18 (ENSSHAG00000022886)	FRMD4A (ENSSHAG00000016639)
Opossum	MODERN SPECIES	7	ATP5F1C (ENSMODG00000016720)	ENSMODG00000038818	TAF3 (ENSMODG00000016726) #20	ENSMODG00000016729	GATA3 (ENSMODG00000016735)	ENSMODG00000016736	ENSMODG00000041063	ENSMODG00000043105	ENSMODG00000044483	CELF2 (ENSMODG00000016763) #21	ENSMODG00000016766	ECHDC3 (ENSMODG00000016770)	ENSMODG00000016773	PROSER2 (ENSMODG00000044728)	UPF2 (ENSMODG00000016794)	DHTKD1 (ENSMODG00000016802) #22	SEC61A2 (ENSMODG00000016820)	CDC123 (ENSMODG00000016826)	NUDT5 (ENSMODG00000016824)	CAMK1D (ENSMODG00000016833) #23	CCDC3 (ENSMODG00000016837)	OPTN (ENSMODG00000016841)	MCM10 (ENSMODG00000016851)	UCMA (ENSMODG00000016854) #24	PHYH (ENSMODG00000016858)	SEPHS1 (ENSMODG00000016864)	BEND7 (ENSMODG00000016875)	ENSMODG00000016902	FRMD4A (ENSMODG00000016916)	ENSMODG00000016919	CDNF (ENSMODG00000047183)
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00940000168430
Boreoeutheria	ANCESTRAL SPECIES	23	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00990000210817
Euarchontoglires	ANCESTRAL SPECIES	23	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b
Primates	ANCESTRAL SPECIES	27	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00990000210817	ENSGT00390000011228.b.b
Haplorrhini	ANCESTRAL SPECIES	32	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.e.a	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00990000210817	ENSGT00390000011228.b.b
Simiiformes	ANCESTRAL SPECIES	29	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.e.a	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00990000210817	ENSGT00390000011228.b.b
Catarrhini	ANCESTRAL SPECIES	26	ENSGT00940000154502.g.a.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.e.a	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00910000147659	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b.d.a	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00990000210817
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00940000154502.g.a.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.e.a	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00910000147659	ENSGT00390000014429.b	ENSGT00510000046985.h.a	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b.d.a	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b
Hominidae	ANCESTRAL SPECIES	13	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.e.a	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000147064	ENSGT00910000147516	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00910000147659	ENSGT00390000014429.b	ENSGT00510000046985.h.a	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b.d.a	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	28	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.e.a	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000147064	ENSGT00910000147516	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00910000147659	ENSGT00390000014429.b	ENSGT00510000046985.h.a	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b.d.a	ENSGT00940000163804	ENSGT00390000000950.c.b.c	ENSGT00940000162606
Homo/Pan group	ANCESTRAL SPECIES	28	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.e.a	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000147064	ENSGT00910000147516	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b.d.a	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Pan	ANCESTRAL SPECIES	11	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.e.a	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00730000111085.A.s.b	ENSGT00940000155461.E #21	ENSGT00910000147064	ENSGT00910000147516	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00910000147659	ENSGT00950000183210.d.a.c.b.a.b	ENSGT00510000046985.h.a	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b.d.a	ENSGT00940000162606	ENSGT00390000015073
Chimpanzee	MODERN SPECIES	1	ITIH2 (ENSPTRG00000002275)	KIN (ENSPTRG00000002276)	ATP5F1C (ENSPTRG00000002277)	TAF3 (ENSPTRG00000002278) #20	GATA3 (ENSPTRG00000023695)	ENSPTRG00000051767	ENSPTRG00000047776	ENSPTRG00000050223	CELF2 (ENSPTRG00000002284) #21	ENSPTRG00000045911	ENSPTRG00000044492	USP6NL (ENSPTRG00000002286)	ECHDC3 (ENSPTRG00000002288)	PROSER2 (ENSPTRG00000002289)	UPF2 (ENSPTRG00000002291)	DHTKD1 (ENSPTRG00000002292) #22	SEC61A2 (ENSPTRG00000002293)	NUDT5 (ENSPTRG00000002294)	CDC123 (ENSPTRG00000002295)	CAMK1D (ENSPTRG00000002296) #23	CCDC3 (ENSPTRG00000002297)	ENSPTRG00000046267	ENSPTRG00000049589	OPTN (ENSPTRG00000002298)	ENSPTRG00000041856	ENSPTRG00000048693	MCM10 (ENSPTRG00000023150)	UCMA (ENSPTRG00000002301) #24	PHYH (ENSPTRG00000002302)	SEPHS1 (ENSPTRG00000002303)	BEND7 (ENSPTRG00000002304)
Bonobo	MODERN SPECIES	1	SFMBT2 (ENSPPAG00000038778)	ITIH5 (ENSPPAG00000042719)	ITIH2 (ENSPPAG00000000244)	KIN (ENSPPAG00000035992)	ATP5F1C (ENSPPAG00000007094)	ENSPPAG00000021180 #20	GATA3 (ENSPPAG00000026896)	ENSPPAG00000033867	ENSPPAG00000030308 #16	CELF2 (ENSPPAG00000029170) #21	ENSPPAG00000043069	USP6NL (ENSPPAG00000036030)	ENSPPAG00000019724	ENSPPAG00000043303	UPF2 (ENSPPAG00000037953)	DHTKD1 (ENSPPAG00000036813) #22	SEC61A2 (ENSPPAG00000037803)	NUDT5 (ENSPPAG00000035132)	CDC123 (ENSPPAG00000039516)	CAMK1D (ENSPPAG00000042814) #23	CCDC3 (ENSPPAG00000033219)	ENSPPAG00000035264	ENSPPAG00000032893	OPTN (ENSPPAG00000038517)	ENSPPAG00000043268	ENSPPAG00000027069	MCM10 (ENSPPAG00000028191)	UCMA (ENSPPAG00000029216) #24	PHYH (ENSPPAG00000042110)	SEPHS1 (ENSPPAG00000039256)	ENSPPAG00000038510
Human	MODERN SPECIES	1	RBM17 (ENSG00000134453)	PFKFB3 (ENSG00000170525)	PRKCQ (ENSG00000065675)	SFMBT2 (ENSG00000198879)	ITIH5 (ENSG00000123243)	ITIH2 (ENSG00000151655)	KIN (ENSG00000151657)	ATP5F1C (ENSG00000165629)	TAF3 (ENSG00000165632) #20	GATA3 (ENSG00000107485)	CELF2 (ENSG00000048740) #21	USP6NL (ENSG00000148429)	ECHDC3 (ENSG00000134463)	PROSER2 (ENSG00000148426)	UPF2 (ENSG00000151461)	DHTKD1 (ENSG00000181192) #22	SEC61A2 (ENSG00000065665)	NUDT5 (ENSG00000165609)	CDC123 (ENSG00000151465)	CAMK1D (ENSG00000183049) #23	CCDC3 (ENSG00000151468)	OPTN (ENSG00000123240)	MCM10 (ENSG00000065328)	UCMA (ENSG00000165623) #24	PHYH (ENSG00000107537)	SEPHS1 (ENSG00000086475)	BEND7 (ENSG00000165626)	PRPF18 (ENSG00000165630)	FRMD4A (ENSG00000151474)	FAM107B (ENSG00000065809)	CDNF (ENSG00000185267)
Gorilla	MODERN SPECIES	1	TAF3 (ENSGGOG00000016706) #20	GATA3 (ENSGGOG00000006161)	ENSGGOG00000038620	ENSGGOG00000036823	ENSGGOG00000024779	ENSGGOG00000016866 #16	ENSGGOG00000043178	ENSGGOG00000041103	CELF2 (ENSGGOG00000009330) #21	ENSGGOG00000042780	ENSGGOG00000036377	USP6NL (ENSGGOG00000015405)	ECHDC3 (ENSGGOG00000009704)	PROSER2 (ENSGGOG00000028345)	UPF2 (ENSGGOG00000001479)	DHTKD1 (ENSGGOG00000010847) #22	SEC61A2 (ENSGGOG00000008875)	NUDT5 (ENSGGOG00000006325)	CDC123 (ENSGGOG00000024021)	CAMK1D (ENSGGOG00000016547) #23	ENSGGOG00000042816	CCDC3 (ENSGGOG00000015404)	OPTN (ENSGGOG00000014718)	ENSGGOG00000040381	ENSGGOG00000042608	MCM10 (ENSGGOG00000014159)	UCMA (ENSGGOG00000014175) #24	SEPHS1 (ENSGGOG00000003806)	ENSGGOG00000025535	ENSGGOG00000008759	PRPF18 (ENSGGOG00000025188)
Orangutan	MODERN SPECIES	1	ITIH5 (ENSPPYG00000002073)	ITIH2 (ENSPPYG00000002074)	KIN (ENSPPYG00000002075)	ATP5F1C (ENSPPYG00000002076)	TAF3 (ENSPPYG00000002077) #20	GATA3 (ENSPPYG00000002079)	ENSPPYG00000002080	ENSPPYG00000034572	ENSPPYG00000036463	CELF2 (ENSPPYG00000002083) #21	USP6NL (ENSPPYG00000002085)	ENSPPYG00000002086	ECHDC3 (ENSPPYG00000031131)	PROSER2 (ENSPPYG00000040683)	UPF2 (ENSPPYG00000002089)	DHTKD1 (ENSPPYG00000002833) #22	SEC61A2 (ENSPPYG00000002090)	NUDT5 (ENSPPYG00000002091)	CDC123 (ENSPPYG00000002092)	CAMK1D (ENSPPYG00000002093) #23	CCDC3 (ENSPPYG00000002094)	OPTN (ENSPPYG00000002095)	ENSPPYG00000032649	MCM10 (ENSPPYG00000002096)	UCMA (ENSPPYG00000002097) #24	PHYH (ENSPPYG00000002098)	SEPHS1 (ENSPPYG00000002099)	ENSPPYG00000002100	PRPF18 (ENSPPYG00000002101)	FRMD4A (ENSPPYG00000002102)	FAM107B (ENSPPYG00000002103)
Gibbon	MODERN SPECIES	24	ENSNLEG00000012578	ENSNLEG00000012568	TRDMT1 (ENSNLEG00000012525)	CUBN (ENSNLEG00000012456)	RSU1 (ENSNLEG00000029235)	C1QL3 (ENSNLEG00000028261)	PTER (ENSNLEG00000012435)	MINDY3 (ENSNLEG00000012397)	ITGA8 (ENSNLEG00000012372)	FAM171A1 (ENSNLEG00000012363)	NMT2 (ENSNLEG00000012356)	ENSNLEG00000032724	ENSNLEG00000028777	ACBD7 (ENSNLEG00000027478)	ENSNLEG00000012350	DHTKD1 (ENSNLEG00000012337) #22	SEC61A2 (ENSNLEG00000012317)	NUDT5 (ENSNLEG00000012298)	CDC123 (ENSNLEG00000012289)	CAMK1D (ENSNLEG00000012287) #23	CCDC3 (ENSNLEG00000027361)	ENSNLEG00000027426	OPTN (ENSNLEG00000012276)	ENSNLEG00000031528	MCM10 (ENSNLEG00000012243)	UCMA (ENSNLEG00000012237) #24	PHYH (ENSNLEG00000012218)	ENSNLEG00000012205	ENSNLEG00000012199	PRPF18 (ENSNLEG00000012186)	FRMD4A (ENSNLEG00000012161)
Cercopithecidae	ANCESTRAL SPECIES	29	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.e.a	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000147064	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000014092.k.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b.d.a.c	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00950000182835.d.b	ENSGT00940000154502.g.a.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.e.a	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000014092.k.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b.d.a.c	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.e.a	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00730000111085.A.s.b	ENSGT00910000147966	ENSGT00940000155461.E #21	ENSGT00910000147064	ENSGT00910000148495	ENSGT00910000147516	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000014092.k.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b.d.a.c	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Cercopithecinae_b	ANCESTRAL SPECIES	41	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.f	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00730000111085.A.s.b	ENSGT00910000147966	ENSGT00940000155461.E #21	ENSGT00910000147064	ENSGT00910000148495	ENSGT00910000147516	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000014092.k.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b.d.a.c	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00910000148405
Olive baboon	MODERN SPECIES	2	ITIH5 (ENSPANG00000023411)	ITIH2 (ENSPANG00000023413)	KIN (ENSPANG00000023407)	ATP5F1C (ENSPANG00000023406)	TAF3 (ENSPANG00000023405) #20	GATA3 (ENSPANG00000023402)	ENSPANG00000049234	ENSPANG00000037934	ENSPANG00000048496	ENSPANG00000038303	CELF2 (ENSPANG00000023401) #21	USP6NL (ENSPANG00000023396)	ECHDC3 (ENSPANG00000042011)	PROSER2 (ENSPANG00000030574)	UPF2 (ENSPANG00000023399)	DHTKD1 (ENSPANG00000023395) #22	NUDT5 (ENSPANG00000023368)	CDC123 (ENSPANG00000023371)	CAMK1D (ENSPANG00000023374) #23	ENSPANG00000044508	CCDC3 (ENSPANG00000046006)	ENSPANG00000046713	MCM10 (ENSPANG00000023347)	UCMA (ENSPANG00000023349) #24	PHYH (ENSPANG00000023351)	SEPHS1 (ENSPANG00000023352)	ENSPANG00000023353	PRPF18 (ENSPANG00000023346)	ENSPANG00000023341	FRMD4A (ENSPANG00000023342)	ENSPANG00000044010
Cercopithecinae_d	ANCESTRAL SPECIES	39	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.e.a	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00730000111085.A.s.b	ENSGT00910000147966	ENSGT00940000155461.E #21	ENSGT00910000147064	ENSGT00910000148495	ENSGT00910000147516	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i	ENSGT00390000003057	ENSGT00390000008264	ENSGT00910000147265	ENSGT00940000156008	ENSGT01030000234539.b.b.b	ENSGT00390000014818.g.b.b	ENSGT00390000000153.l.b.c.a	ENSGT00930000151028	ENSGT00940000155303	ENSGT00940000154935	ENSGT00910000147319	ENSGT00940000153289.a.a.a	ENSGT00390000014618.a
Sooty mangabey	MODERN SPECIES	260	PRKCQ (ENSCATG00000034698)	SFMBT2 (ENSCATG00000039751)	ITIH5 (ENSCATG00000015934)	ITIH2 (ENSCATG00000034804)	KIN (ENSCATG00000036456)	ENSCATG00000039954	TAF3 (ENSCATG00000030499) #20	GATA3 (ENSCATG00000031434)	ENSCATG00000044190	ENSCATG00000036495	CELF2 (ENSCATG00000032144) #21	USP6NL (ENSCATG00000041397)	ECHDC3 (ENSCATG00000040725)	PROSER2 (ENSCATG00000040228)	UPF2 (ENSCATG00000032679)	DHTKD1 (ENSCATG00000035901) #22	NUDT5 (ENSCATG00000013208)	CDC123 (ENSCATG00000043984)	ZCCHC24 (ENSCATG00000038643)	ENSCATG00000038710	PPIF (ENSCATG00000041083)	ZMIZ1 (ENSCATG00000040251)	ENSCATG00000019992	ENSCATG00000022118	ENSCATG00000042439	POLR3A (ENSCATG00000035842)	DLG5 (ENSCATG00000032528)	ENSCATG00000041933	ENSCATG00000019086	ENSCATG00000038475	ENSCATG00000031300
Drill	MODERN SPECIES	486	ITIH5 (ENSMLEG00000005582)	ITIH2 (ENSMLEG00000039643)	KIN (ENSMLEG00000032428)	ATP5F1C (ENSMLEG00000032917)	TAF3 (ENSMLEG00000043956) #20	GATA3 (ENSMLEG00000037954)	ENSMLEG00000017457	ENSMLEG00000001481	CELF2 (ENSMLEG00000040420) #21	ENSMLEG00000015333	ENSMLEG00000015097	USP6NL (ENSMLEG00000039276)	ECHDC3 (ENSMLEG00000016856)	PROSER2 (ENSMLEG00000035386)	UPF2 (ENSMLEG00000036120)	DHTKD1 (ENSMLEG00000043665) #22	SEC61A2 (ENSMLEG00000040421)	NUDT5 (ENSMLEG00000043058)	CDC123 (ENSMLEG00000028527)	ENSMLEG00000044281	ENSMLEG00000037094	PPIF (ENSMLEG00000029303)	ZMIZ1 (ENSMLEG00000040138)	ENSMLEG00000027423	ENSMLEG00000037657	POLR3A (ENSMLEG00000030014)	DLG5 (ENSMLEG00000028281)	ENSMLEG00000028114	ENSMLEG00000009595	KCNMA1 (ENSMLEG00000035051)	ENSMLEG00000025705
Macaca	ANCESTRAL SPECIES	11	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.e.a	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00730000111085.A.s.b	ENSGT00910000147966	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00910000147516	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318.e	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00910000147953	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000014092.k.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b.d.a.c	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b
Pig-tailed macaque	MODERN SPECIES	169					ENSMNEG00000038286	ENSMNEG00000037251	ENSMNEG00000000401	CELF2 (ENSMNEG00000045450) #21	ENSMNEG00000023625	ENSMNEG00000014447	USP6NL (ENSMNEG00000032266)	ECHDC3 (ENSMNEG00000038664)	PROSER2 (ENSMNEG00000044048)	ENSMNEG00000035275	ENSMNEG00000008062	DHTKD1 (ENSMNEG00000038335) #22	SEC61A2 (ENSMNEG00000040329)	NUDT5 (ENSMNEG00000042385)	CDC123 (ENSMNEG00000033059)	CAMK1D (ENSMNEG00000040028) #23	ENSMNEG00000009115	CCDC3 (ENSMNEG00000043714)	OPTN (ENSMNEG00000042124)	ENSMNEG00000028929	MCM10 (ENSMNEG00000032426)	UCMA (ENSMNEG00000042078) #24	ENSMNEG00000031768	PHYH (ENSMNEG00000003535)	SEPHS1 (ENSMNEG00000041342)	ENSMNEG00000039551	PRPF18 (ENSMNEG00000024679)
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00940000158123	ENSGT00940000161627.b.a.b.b.a.a.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.e.a	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT01100000263539.b.b.b.b.b.a.b.a.a.b.a.a.a.a.b	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.b.a.a.b.a.a.a	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318.e	ENSGT00950000183125.a #22	ENSGT00940000154045.a.i	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT01100000263539.b.a.a.a.b.b.a.b.a.b.b.b	ENSGT00390000001775.B	ENSGT00390000000950.c.b.d.a.c	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00910000148279	ENSGT00390000011228.b.b
Rhesus	MODERN SPECIES	19	ITIH2 (ENSMMUG00000015954)	KIN (ENSMMUG00000009206)	ATP5F1C (ENSMMUG00000009207)	TAF3 (ENSMMUG00000013101) #20	GATA3 (ENSMMUG00000006944)	ENSMMUG00000055461	ENSMMUG00000063848	ENSMMUG00000052452	CELF2 (ENSMMUG00000037449) #21	USP6NL (ENSMMUG00000006790)	ENSMMUG00000054583	ENSMMUG00000051192	ECHDC3 (ENSMMUG00000061804)	PROSER2 (ENSMMUG00000023632)	UPF2 (ENSMMUG00000008241)	SEC61A2 (ENSMMUG00000017139) #22	NUDT5 (ENSMMUG00000017141)	CDC123 (ENSMMUG00000017145)	CAMK1D (ENSMMUG00000011956) #23	ENSMMUG00000064773	CCDC3 (ENSMMUG00000058290)	OPTN (ENSMMUG00000005601)	MCM10 (ENSMMUG00000005602)	UCMA (ENSMMUG00000005603) #24	ENSMMUG00000062961	PHYH (ENSMMUG00000023798)	SEPHS1 (ENSMMUG00000021233)	BEND7 (ENSMMUG00000002081)	PRPF18 (ENSMMUG00000015071)	FRMD4A (ENSMMUG00000017164)	ENSMMUG00000050570
Crab-eating macaque	MODERN SPECIES	19	ATP5F1C (ENSMFAG00000030332)	TAF3 (ENSMFAG00000041323) #20	ENSMFAG00000064750	GATA3 (ENSMFAG00000042633)	ENSMFAG00000049802	ENSMFAG00000057121	ENSMFAG00000064585	CELF2 (ENSMFAG00000033084) #21	ENSMFAG00000050790	ENSMFAG00000050571	ENSMFAG00000055894	ENSMFAG00000055464	ECHDC3 (ENSMFAG00000041388)	PROSER2 (ENSMFAG00000030660)	UPF2 (ENSMFAG00000043865)	DHTKD1 (ENSMFAG00000032814) #22	NUDT5 (ENSMFAG00000045740)	CDC123 (ENSMFAG00000036128)	CAMK1D (ENSMFAG00000039982) #23	ENSMFAG00000062533	ENSMFAG00000055895	ENSMFAG00000051811	ENSMFAG00000059262	CCDC3 (ENSMFAG00000033481)	OPTN (ENSMFAG00000045578)	MCM10 (ENSMFAG00000031145)	UCMA (ENSMFAG00000043336) #24	ENSMFAG00000065387	PHYH (ENSMFAG00000042378)	SEPHS1 (ENSMFAG00000001994)	ENSMFAG00000002654
Vervet Monkey	MODERN SPECIES	28	PFKFB3 (ENSCSAG00000013532)	PRKCQ (ENSCSAG00000013516)	SFMBT2 (ENSCSAG00000013499)	ITIH5 (ENSCSAG00000013479)	ITIH2 (ENSCSAG00000013467)	KIN (ENSCSAG00000013458)	ATP5F1C (ENSCSAG00000013445)	TAF3 (ENSCSAG00000013434) #20	GATA3 (ENSCSAG00000013423)	CELF2 (ENSCSAG00000013405) #21	USP6NL (ENSCSAG00000013395)	ENSCSAG00000019053	ECHDC3 (ENSCSAG00000013384)	PROSER2 (ENSCSAG00000013377)	UPF2 (ENSCSAG00000013372)	DHTKD1 (ENSCSAG00000013347) #22	SEC61A2 (ENSCSAG00000013285)	NUDT5 (ENSCSAG00000013282)	CDC123 (ENSCSAG00000013277)	ENSCSAG00000013268	CAMK1D (ENSCSAG00000013255) #23	CCDC3 (ENSCSAG00000013223)	OPTN (ENSCSAG00000013210)	MCM10 (ENSCSAG00000013173)	UCMA (ENSCSAG00000013163) #24	PHYH (ENSCSAG00000013160)	SEPHS1 (ENSCSAG00000013143)	ENSCSAG00000019054	ENSCSAG00000013115	PRPF18 (ENSCSAG00000013109)	ENSCSAG00000013104
Rhinopithecus	ANCESTRAL SPECIES	408									ENSGT00940000155461.E #21	ENSGT00910000147064	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b
Golden snub-nosed monkey	MODERN SPECIES	1286									ENSRROG00000027819	CELF2 (ENSRROG00000044478) #21	ENSRROG00000001835	USP6NL (ENSRROG00000040425)	ECHDC3 (ENSRROG00000036064)	PROSER2 (ENSRROG00000031741)	UPF2 (ENSRROG00000043547)	DHTKD1 (ENSRROG00000025116) #22	NUDT5 (ENSRROG00000033183)	CDC123 (ENSRROG00000043069)	CAMK1D (ENSRROG00000039467) #23	ENSRROG00000045347	ENSRROG00000032367	CCDC3 (ENSRROG00000024541)
Black snub-nosed monkey	MODERN SPECIES	825										CELF2 (ENSRBIG00000042443) #21	ENSRBIG00000038531	USP6NL (ENSRBIG00000039706)	ECHDC3 (ENSRBIG00000036377)	PROSER2 (ENSRBIG00000033322)	UPF2 (ENSRBIG00000037780)	DHTKD1 (ENSRBIG00000031411) #22	SEC61A2 (ENSRBIG00000030287)	NUDT5 (ENSRBIG00000031801)	CDC123 (ENSRBIG00000042911)	CAMK1D (ENSRBIG00000041279) #23	CCDC3 (ENSRBIG00000002961)
Platyrrhini	ANCESTRAL SPECIES	39	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.e.a	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000165196.d.b	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00950000183098.b.a.b.ib.a.a.a.b	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Cebidae	ANCESTRAL SPECIES	37	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.e.a	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000165196.d.b	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00950000183098.b.a.b.ib.a.a.a.b	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Cebidae_a	ANCESTRAL SPECIES	45											ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.i.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00950000183098.b.a.b.ib.a.a.a.b	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Capuchin	MODERN SPECIES	61	ENSCCAG00000035660	PCDH17 (ENSCCAG00000029997)	ECT2 (ENSCCAG00000031591)	NCEH1 (ENSCCAG00000026525)	TNFSF10 (ENSCCAG00000033124)	GHSR (ENSCCAG00000028148)	FNDC3B (ENSCCAG00000034965)	TMEM212 (ENSCCAG00000029297)	PLD1 (ENSCCAG00000029398)	TNIK (ENSCCAG00000035042)	SLC2A2 (ENSCCAG00000035841)	EIF5A2 (ENSCCAG00000023587)	ECHDC3 (ENSCCAG00000023126)	PROSER2 (ENSCCAG00000032607)	UPF2 (ENSCCAG00000035991)	DHTKD1 (ENSCCAG00000031587) #22	SEC61A2 (ENSCCAG00000024207)	ENSCCAG00000030198	CDC123 (ENSCCAG00000023475)	CAMK1D (ENSCCAG00000024535) #23	CCDC3 (ENSCCAG00000031972)	OPTN (ENSCCAG00000034418)	MCM10 (ENSCCAG00000029355)	UCMA (ENSCCAG00000034691) #24	ENSCCAG00000032911	ENSCCAG00000022163	ENSCCAG00000035137	PRPF18 (ENSCCAG00000036822)	FRMD4A (ENSCCAG00000030323)	FAM107B (ENSCCAG00000037109)	CDNF (ENSCCAG00000022323)
Bolivian squirrel monkey	MODERN SPECIES	81	PSMD1 (ENSSBOG00000024079)	HTR2B (ENSSBOG00000030383)	ARMC9 (ENSSBOG00000002634)	B3GNT7 (ENSSBOG00000026236)	ENSSBOG00000029193	ENSSBOG00000033173	NMUR1 (ENSSBOG00000033314)	ENSSBOG00000033574	PDE6D (ENSSBOG00000026518)	ENSSBOG00000033548	CELF2 (ENSSBOG00000028844) #21	USP6NL (ENSSBOG00000018783)	ECHDC3 (ENSSBOG00000027572)	PROSER2 (ENSSBOG00000025069)	UPF2 (ENSSBOG00000020012)	DHTKD1 (ENSSBOG00000024400) #22	SEC61A2 (ENSSBOG00000026487)	NUDT5 (ENSSBOG00000019306)	CDC123 (ENSSBOG00000024928)	ENSSBOG00000004407	CAMK1D (ENSSBOG00000020004) #23	CCDC3 (ENSSBOG00000001721)	ENSSBOG00000024923	MCM10 (ENSSBOG00000033800)	UCMA (ENSSBOG00000018792) #24	ENSSBOG00000029744	ENSSBOG00000035122	ENSSBOG00000022196	ENSSBOG00000025304	PRPF18 (ENSSBOG00000034482)	FRMD4A (ENSSBOG00000019994)
Marmoset	MODERN SPECIES	19	ENSCJAG00000072820	PITRM1 (ENSCJAG00000020425)	ENSCJAG00000075257	PFKP (ENSCJAG00000020417)	ENSCJAG00000065095	ADARB2 (ENSCJAG00000008412)	ENSCJAG00000083378	WDR37 (ENSCJAG00000008441)	IDI1 (ENSCJAG00000008483)	GTPBP4 (ENSCJAG00000008494)	ENSCJAG00000018434	DIP2C (ENSCJAG00000039229)	ENSCJAG00000072277	ZMYND11 (ENSCJAG00000018489)	ENSCJAG00000072824	DHTKD1 (ENSCJAG00000047014) #22	SEC61A2 (ENSCJAG00000018554)	NUDT5 (ENSCJAG00000042223)	CDC123 (ENSCJAG00000018603)	CAMK1D (ENSCJAG00000009623) #23	ENSCJAG00000082115	CCDC3 (ENSCJAG00000061142)	OPTN (ENSCJAG00000009575)	MCM10 (ENSCJAG00000009531)	UCMA (ENSCJAG00000009517) #24	PHYH (ENSCJAG00000009507)	ENSCJAG00000009494	ENSCJAG00000009474	PRPF18 (ENSCJAG00000009432)	FRMD4A (ENSCJAG00000009404)	FAM107B (ENSCJAG00000009401)
Mas night monkey	MODERN SPECIES	485	SFMBT2 (ENSANAG00000027979)	ITIH5 (ENSANAG00000026672)	ITIH2 (ENSANAG00000025871)	KIN (ENSANAG00000023418)	ATP5F1C (ENSANAG00000010968)	TAF3 (ENSANAG00000031079) #20	GATA3 (ENSANAG00000031100)	ENSANAG00000032704	CELF2 (ENSANAG00000024646) #21	USP6NL (ENSANAG00000021200)	ECHDC3 (ENSANAG00000034413)	PROSER2 (ENSANAG00000033985)	UPF2 (ENSANAG00000028451)	ENSANAG00000021388	ENSANAG00000030625	DHTKD1 (ENSANAG00000022243) #22	SEC61A2 (ENSANAG00000021079)	ENSANAG00000034377	CDC123 (ENSANAG00000035436)	CAMK1D (ENSANAG00000035075) #23	ENSANAG00000036212
Tarsier	MODERN SPECIES	5613												ENSTSYG00000005118 #21	ENSTSYG00000028259	ECHDC3 (ENSTSYG00000026918)	UPF2 (ENSTSYG00000000935)	DHTKD1 (ENSTSYG00000000058) #22	ENSTSYG00000029222	SEC61A2 (ENSTSYG00000011990)	NUDT5 (ENSTSYG00000011999)	CDC123 (ENSTSYG00000012000)
Strepsirrhini	ANCESTRAL SPECIES	30	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.c.b	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Lemuriformes	ANCESTRAL SPECIES	42	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.d	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00940000154926	ENSGT00940000156952.o.a	ENSGT00940000154453.a.b.b	ENSGT00910000148002	ENSGT01090000260098.B	ENSGT00940000161191.A	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b
Lemuriformes_a	ANCESTRAL SPECIES	49	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837.d	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00940000154926	ENSGT00940000156952.o.a	ENSGT00940000156952.p	ENSGT00940000154453.a.b.b	ENSGT00910000148002	ENSGT01090000260098.B	ENSGT00940000161191.A	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b
Coquerels sifaka	MODERN SPECIES	256						ITIH2 (ENSPCOG00000027531)	ENSPCOG00000016520	ATP5F1C (ENSPCOG00000017668)	TAF3 (ENSPCOG00000022953) #20	ENSPCOG00000015862	CELF2 (ENSPCOG00000026161) #21	USP6NL (ENSPCOG00000014309)	ECHDC3 (ENSPCOG00000028366)	PROSER2 (ENSPCOG00000010761)	UPF2 (ENSPCOG00000021656)	DHTKD1 (ENSPCOG00000019523) #22	ENSPCOG00000010646	ITGB1 (ENSPCOG00000008266)	NRP1 (ENSPCOG00000020318)	PARD3 (ENSPCOG00000017477)	CUL2 (ENSPCOG00000013534)	ENSPCOG00000017929
Greater bamboo lemur	MODERN SPECIES	1074																DHTKD1 (ENSPSMG00000018603) #22	ITGB1 (ENSPSMG00000018586)	NRP1 (ENSPSMG00000018317)	PARD3 (ENSPSMG00000017428)
Mouse lemur	MODERN SPECIES	17	PFKP (ENSMICG00000006278)	SFMBT2 (ENSMICG00000029463)	ENSMICG00000032631	ITIH5 (ENSMICG00000008213)	ITIH2 (ENSMICG00000008230)	KIN (ENSMICG00000008248)	ENSMICG00000008263	TAF3 (ENSMICG00000008273) #20	GATA3 (ENSMICG00000008284)	ENSMICG00000026414	CELF2 (ENSMICG00000007867) #21	USP6NL (ENSMICG00000014584)	ECHDC3 (ENSMICG00000046064)	PROSER2 (ENSMICG00000032687)	UPF2 (ENSMICG00000001716)	DHTKD1 (ENSMICG00000001727) #22	ITGB1 (ENSMICG00000008479)	ENSMICG00000042330	ENSMICG00000030269	ADARB2 (ENSMICG00000047603)	WDR37 (ENSMICG00000032267)	ENSMICG00000045735	GTPBP4 (ENSMICG00000013332)	LARP4B (ENSMICG00000001301)	DIP2C (ENSMICG00000005674)	ZMYND11 (ENSMICG00000010021)	NRP1 (ENSMICG00000008497)	ENSMICG00000036552	PARD3 (ENSMICG00000008515)	CUL2 (ENSMICG00000000831)	ENSMICG00000000835
Bushbaby	MODERN SPECIES	134	RBM17 (ENSOGAG00000015687)	PFKFB3 (ENSOGAG00000015695)	PRKCQ (ENSOGAG00000013168)	SFMBT2 (ENSOGAG00000003211)	ITIH5 (ENSOGAG00000015212)	ITIH2 (ENSOGAG00000015221)	KIN (ENSOGAG00000015236)	ENSOGAG00000015242	ENSOGAG00000034156 #20	GATA3 (ENSOGAG00000011371)	CELF2 (ENSOGAG00000005541) #21	USP6NL (ENSOGAG00000025172)	ECHDC3 (ENSOGAG00000005792)	PROSER2 (ENSOGAG00000029648)	UPF2 (ENSOGAG00000005796)	DHTKD1 (ENSOGAG00000005802) #22	SEC61A2 (ENSOGAG00000005809)	NUDT5 (ENSOGAG00000005816)	CDC123 (ENSOGAG00000005820)	CAMK1D (ENSOGAG00000008560) #23	CCDC3 (ENSOGAG00000024450)	OPTN (ENSOGAG00000000624)	UCMA (ENSOGAG00000027294) #24	ENSOGAG00000025545	PHYH (ENSOGAG00000007803)	SEPHS1 (ENSOGAG00000007807)	BEND7 (ENSOGAG00000010676)	PRPF18 (ENSOGAG00000007294)	FRMD4A (ENSOGAG00000007298)	FAM107B (ENSOGAG00000004725)	CDNF (ENSOGAG00000004727)
Euarchontoglires_A	ANCESTRAL SPECIES	27	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Glires	ANCESTRAL SPECIES	28	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Rodentia	ANCESTRAL SPECIES	24	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Rodentia_A	ANCESTRAL SPECIES	25	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Sciuridae	ANCESTRAL SPECIES		ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000154811.A	ENSGT00940000153498.B.a	ENSGT00390000005508.b	ENSGT00940000156105	ENSGT00940000157951	ENSGT00940000155939	ENSGT00940000155918
Marmotini	ANCESTRAL SPECIES	21	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000155329.b.a.b.a	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000154811.A	ENSGT00940000153498.B.a	ENSGT00390000005508.b	ENSGT00940000156105	ENSGT00940000157951	ENSGT00940000155939	ENSGT00940000155918
Marmotini_b	ANCESTRAL SPECIES	15	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000155329.b.a.b.a	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000154811.A	ENSGT00940000153498.B.a	ENSGT00390000005508.b	ENSGT00940000156105	ENSGT00940000157951	ENSGT00940000155939	ENSGT00940000155918
Squirrel	MODERN SPECIES	84	PFKFB3 (ENSSTOG00000010837)	PRKCQ (ENSSTOG00000020180)	ENSSTOG00000012889	ITIH5 (ENSSTOG00000016386)	ITIH2 (ENSSTOG00000015821)	KIN (ENSSTOG00000026385)	ENSSTOG00000026133	TAF3 (ENSSTOG00000001073) #20	GATA3 (ENSSTOG00000001075)	CELF2 (ENSSTOG00000001564) #21	USP6NL (ENSSTOG00000001581)	ECHDC3 (ENSSTOG00000009983)	PROSER2 (ENSSTOG00000021219)	ENSSTOG00000021094	UPF2 (ENSSTOG00000013075)	DHTKD1 (ENSSTOG00000016473) #22	SEC61A2 (ENSSTOG00000016476)	NUDT5 (ENSSTOG00000016479)	CDC123 (ENSSTOG00000016480)	CAMK1D (ENSSTOG00000016481) #23	CCDC3 (ENSSTOG00000031030)	YME1L1 (ENSSTOG00000027471)	MASTL (ENSSTOG00000010601)	ACBD5 (ENSSTOG00000010609)	ABI1 (ENSSTOG00000028045)	PDSS1 (ENSSTOG00000001698)	APBB1IP (ENSSTOG00000010611)	GAD2 (ENSSTOG00000002059)	MYO3A (ENSSTOG00000000004)	GPR158 (ENSSTOG00000005358)	THNSL1 (ENSSTOG00000023171)
Arctic ground squirrel	MODERN SPECIES	388												ECHDC3 (ENSUPAG00010008927)	PROSER2 (ENSUPAG00010008896)	ENSUPAG00010008890	UPF2 (ENSUPAG00010008867)	DHTKD1 (ENSUPAG00010008790) #22	SEC61A2 (ENSUPAG00010008719)	NUDT5 (ENSUPAG00010008681)	CDC123 (ENSUPAG00010008644)	CAMK1D (ENSUPAG00010008583) #23	ENSUPAG00010008574	CCDC3 (ENSUPAG00010008567)	YME1L1 (ENSUPAG00010008503)	MASTL (ENSUPAG00010008481)	ACBD5 (ENSUPAG00010008177)	ABI1 (ENSUPAG00010007329)	PDSS1 (ENSUPAG00010007288)	ENSUPAG00010007244	APBB1IP (ENSUPAG00010007196)
Alpin marmot	MODERN SPECIES	41	SFMBT2 (ENSMMMG00000016285)	ITIH5 (ENSMMMG00000016310)	ITIH2 (ENSMMMG00000016325)	KIN (ENSMMMG00000016337)	ATP5F1C (ENSMMMG00000016362)	TAF3 (ENSMMMG00000016386) #20	ENSMMMG00000016397	ENSMMMG00000016407	CELF2 (ENSMMMG00000016437) #21	ENSMMMG00000016571	ENSMMMG00000016575	USP6NL (ENSMMMG00000016577)	ECHDC3 (ENSMMMG00000016609)	PROSER2 (ENSMMMG00000016619)	UPF2 (ENSMMMG00000016627)	DHTKD1 (ENSMMMG00000016651) #22	SEC61A2 (ENSMMMG00000016702)	NUDT5 (ENSMMMG00000016744)	CDC123 (ENSMMMG00000016751)	CAMK1D (ENSMMMG00000016767) #23	CCDC3 (ENSMMMG00000016796)	YME1L1 (ENSMMMG00000016800)	MASTL (ENSMMMG00000016812)	ACBD5 (ENSMMMG00000016830)	ABI1 (ENSMMMG00000016889)	ENSMMMG00000016956	ENSMMMG00000016962	APBB1IP (ENSMMMG00000016974)	GAD2 (ENSMMMG00000016992)	MYO3A (ENSMMMG00000017006)	ENSMMMG00000017022
Eurasian red squirrel	MODERN SPECIES	3	ENSSVLG00005008112	PFKFB3 (ENSSVLG00005008244)	PRKCQ (ENSSVLG00005008431)	SFMBT2 (ENSSVLG00005008799)	ITIH5 (ENSSVLG00005008972)	ITIH2 (ENSSVLG00005009220)	KIN (ENSSVLG00005009459)	ATP5F1C (ENSSVLG00005009523)	TAF3 (ENSSVLG00005009591) #20	GATA3 (ENSSVLG00005009625)	CELF2 (ENSSVLG00005009748) #21	USP6NL (ENSSVLG00005010103)	ECHDC3 (ENSSVLG00005010359)	PROSER2 (ENSSVLG00005010392)	UPF2 (ENSSVLG00005010430)	DHTKD1 (ENSSVLG00005010483) #22	SEC61A2 (ENSSVLG00005010635)	NUDT5 (ENSSVLG00005011015)	CDC123 (ENSSVLG00005011124)	CAMK1D (ENSSVLG00005011210) #23	ENSSVLG00005011462	CCDC3 (ENSSVLG00005011541)	ENSSVLG00005011610	YME1L1 (ENSSVLG00005011675)	MASTL (ENSSVLG00005011787)	ACBD5 (ENSSVLG00005012182)	ENSSVLG00005012546	ABI1 (ENSSVLG00005012684)	PDSS1 (ENSSVLG00005013153)	ENSSVLG00005013262	APBB1IP (ENSSVLG00005013617)
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT01020000230354.A.b	ENSGT00390000015073	ENSGT00940000162606	ENSGT00390000000950.c.b	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582	ENSGT00390000015348	ENSGT00940000154653	ENSGT00390000014526	ENSGT00950000183208.B	ENSGT00950000182860.a.a.b	ENSGT00940000154801.d	ENSGT00940000155003.e.a	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00940000157325.w.b.b	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a.l	ENSGT00940000156952
Hystricomorpha_a	ANCESTRAL SPECIES	11	ENSGT01020000230354.A.b	ENSGT00390000015073	ENSGT00940000162606	ENSGT00390000000950.c.b	ENSGT00940000154101.b	ENSGT00940000159227	ENSGT00940000158806	ENSGT00940000158582	ENSGT00390000015348	ENSGT00940000154653	ENSGT00390000014526	ENSGT00950000183208.B	ENSGT00950000182860.a.a.b	ENSGT00940000154801.d	ENSGT00940000155003.e.a	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00940000157325.w.b.b	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a.l	ENSGT00940000156952
Hystricomorpha_b	ANCESTRAL SPECIES	8																ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00940000157325.w.b.b	ENSGT00940000156227.f	ENSGT00940000156625	ENSGT00940000156232.b	ENSGT00440000037780.a.l	ENSGT00940000156952
Long-tailed chinchilla	MODERN SPECIES	169																DHTKD1 (ENSCLAG00000005462) #22	SEC61A2 (ENSCLAG00000006442)	NUDT5 (ENSCLAG00000007344)	CDC123 (ENSCLAG00000007787)	CAMK1D (ENSCLAG00000008371) #23	CCDC3 (ENSCLAG00000010459)	OPTN (ENSCLAG00000010863)	MCM10 (ENSCLAG00000012085)	UCMA (ENSCLAG00000012868) #24	PHYH (ENSCLAG00000015948)	ENSCLAG00000012799	ENSCLAG00000008331	RAB18 (ENSCLAG00000008819)	MKX (ENSCLAG00000009858)	ODAD2 (ENSCLAG00000010273)	ENSCLAG00000012234
Degu	MODERN SPECIES	365																DHTKD1 (ENSODEG00000000373) #22	SEC61A2 (ENSODEG00000000330)	NUDT5 (ENSODEG00000000277)	ENSODEG00000000242	ENSODEG00000000216	CAMK1D (ENSODEG00000000193) #23	CCDC3 (ENSODEG00000000417)	ENSODEG00000000411	ENSODEG00000000387	ENSODEG00000000368	PHYH (ENSODEG00000000348)	UCMA (ENSODEG00000000316) #24	MCM10 (ENSODEG00000000273)	OPTN (ENSODEG00000000236)
Guinea pig	MODERN SPECIES	39	PRPF18 (ENSCPOG00000021069)	ENSCPOG00000002714	SEPHS1 (ENSCPOG00000005549)	BAMBI (ENSCPOG00000034429)	ENSCPOG00000000268	ENSCPOG00000010457	MAP3K8 (ENSCPOG00000006641)	MTPAP (ENSCPOG00000004018)	JCAD (ENSCPOG00000005872)	SVIL (ENSCPOG00000013047)	ZNF438 (ENSCPOG00000000531)	ZEB1 (ENSCPOG00000007682)	ARHGAP12 (ENSCPOG00000005846)	KIF5B (ENSCPOG00000008278)	EPC1 (ENSCPOG00000002494)	DHTKD1 (ENSCPOG00000008248) #22	SEC61A2 (ENSCPOG00000000126)	NUDT5 (ENSCPOG00000000127)	CDC123 (ENSCPOG00000000128)	CAMK1D (ENSCPOG00000003027) #23	OPTN (ENSCPOG00000007560)	MCM10 (ENSCPOG00000007571)	UCMA (ENSCPOG00000007580) #24	ENSCPOG00000019290	PHYH (ENSCPOG00000007582)	RAB18 (ENSCPOG00000032827)	MKX (ENSCPOG00000035405)	ODAD2 (ENSCPOG00000009603)	MPP7 (ENSCPOG00000001663)	WAC (ENSCPOG00000001713)	CREM (ENSCPOG00000015442)
Naked mole-rat female	MODERN SPECIES	20	MAP3K8 (ENSHGLG00000016414)	MTPAP (ENSHGLG00000016439)	JCAD (ENSHGLG00000045602)	ENSHGLG00000016579	ENSHGLG00000016625	ENSHGLG00000041669	ENSHGLG00000016639	ENSHGLG00000042389	ZEB1 (ENSHGLG00000018844)	ARHGAP12 (ENSHGLG00000018869)	KIF5B (ENSHGLG00000018736)	ENSHGLG00000014597	EPC1 (ENSHGLG00000018745)	ENSHGLG00000000283	ENSHGLG00000018366	DHTKD1 (ENSHGLG00000017527) #22	ENSHGLG00000036155	SEC61A2 (ENSHGLG00000017313)	NUDT5 (ENSHGLG00000003588)	CDC123 (ENSHGLG00000003710)	CAMK1D (ENSHGLG00000003840) #23	CCDC3 (ENSHGLG00000041672)	OPTN (ENSHGLG00000004041)	MCM10 (ENSHGLG00000004234)	ENSHGLG00000004303 #24	ENSHGLG00000036321	ENSHGLG00000035197	ENSHGLG00000004695	ODAD2 (ENSHGLG00000005096)	MPP7 (ENSHGLG00000033961)	ENSHGLG00000041697
Rodentia_B	ANCESTRAL SPECIES	32	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Myomorpha	ANCESTRAL SPECIES	34	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Muroidea	ANCESTRAL SPECIES	35	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Muroidea_A	ANCESTRAL SPECIES	14	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00860000135956	ENSGT00860000135638	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00860000135956	ENSGT00860000135638	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Cricetinae	ANCESTRAL SPECIES	26	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00860000135956	ENSGT00860000135638	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Chinese hamster chok1gshd	MODERN SPECIES	317	Sfmbt2 (ENSCGRG00001019695)	ENSCGRG00001012806	Itih5 (ENSCGRG00001001499)	Itih2 (ENSCGRG00001023637)	Kin (ENSCGRG00001018259)	Atp5c1 (ENSCGRG00001013869)	Taf3 (ENSCGRG00001000287) #20	ENSCGRG00001021895	ENSCGRG00001016342	Gata3 (ENSCGRG00001011803)	Celf2 (ENSCGRG00001015058) #21	Usp6nl (ENSCGRG00001016478)	Echdc3 (ENSCGRG00001013214)	Proser2 (ENSCGRG00001024939)	Upf2 (ENSCGRG00001019347)	Dhtkd1 (ENSCGRG00001016298) #22	Sec61a2 (ENSCGRG00001017484)	Nudt5 (ENSCGRG00001005315)	Cdc123 (ENSCGRG00001011313)	Camk1d (ENSCGRG00001005420) #23	Ccdc3 (ENSCGRG00001021619)	Optn (ENSCGRG00001014359)	Mcm10 (ENSCGRG00001011187)	Ucma (ENSCGRG00001014571) #24	Phyh (ENSCGRG00001022685)	Sephs1 (ENSCGRG00001013040)	ENSCGRG00001015360	Prpf18 (ENSCGRG00001023665)	ENSCGRG00001020329	Frmd4a (ENSCGRG00001021993)	ENSCGRG00001016519
Golden Hamster	MODERN SPECIES	728										Celf2 (ENSMAUG00000009783) #21	ENSMAUG00000009812	Usp6nl (ENSMAUG00000017742)	Echdc3 (ENSMAUG00000010548)	Proser2 (ENSMAUG00000013393)	Upf2 (ENSMAUG00000016512)	Dhtkd1 (ENSMAUG00000019348) #22	Nudt5 (ENSMAUG00000020126)	Cdc123 (ENSMAUG00000019286)	Camk1d (ENSMAUG00000003534) #23	Ccdc3 (ENSMAUG00000002142)	Optn (ENSMAUG00000017518)	Phyh (ENSMAUG00000021652)	Sephs1 (ENSMAUG00000020309)	ENSMAUG00000000534	Frmd4a (ENSMAUG00000018829)	ENSMAUG00000002214	Cdnf (ENSMAUG00000016629)	Suv39h2 (ENSMAUG00000007087)	Dclre1c (ENSMAUG00000021563)	Olah (ENSMAUG00000020873)	Acbd7 (ENSMAUG00000005954)
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00860000135956	ENSGT00860000135638	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Prairie vole	MODERN SPECIES	3	Itih5 (ENSMOCG00000005886)	Itih2 (ENSMOCG00000018830)	Kin (ENSMOCG00000016933)	Atp5c1 (ENSMOCG00000022690)	Taf3 (ENSMOCG00000022854) #20	ENSMOCG00000013195	ENSMOCG00000018813	Gata3 (ENSMOCG00000013212)	ENSMOCG00000005386	Celf2 (ENSMOCG00000004765) #21	ENSMOCG00000014426	Usp6nl (ENSMOCG00000013634)	Echdc3 (ENSMOCG00000019315)	Proser2 (ENSMOCG00000001791)	Upf2 (ENSMOCG00000008263)	Dhtkd1 (ENSMOCG00000021831) #22	Sec61a2 (ENSMOCG00000000991)	Nudt5 (ENSMOCG00000007898)	Cdc123 (ENSMOCG00000010761)	Camk1d (ENSMOCG00000002558) #23	Ccdc3 (ENSMOCG00000021095)	Optn (ENSMOCG00000016560)	Mcm10 (ENSMOCG00000022180)	Ucma (ENSMOCG00000005346) #24	Phyh (ENSMOCG00000001877)	Sephs1 (ENSMOCG00000022876)	ENSMOCG00000022807	Prpf18 (ENSMOCG00000021468)	Frmd4a (ENSMOCG00000018621)	ENSMOCG00000018519	Cdnf (ENSMOCG00000016251)
Northern American deer mouse	MODERN SPECIES	18	ENSPEMG00000019758	Itih5 (ENSPEMG00000019780)	Itih2 (ENSPEMG00000007752)	ENSPEMG00000020236	Atp5c1 (ENSPEMG00000020033)	ENSPEMG00000027014	Taf3 (ENSPEMG00000020120) #20	Gata3 (ENSPEMG00000019986)	ENSPEMG00000030354	Celf2 (ENSPEMG00000017244) #21	ENSPEMG00000009398	Usp6nl (ENSPEMG00000015329)	Echdc3 (ENSPEMG00000009850)	Proser2 (ENSPEMG00000031395)	Upf2 (ENSPEMG00000015731)	Dhtkd1 (ENSPEMG00000017929) #22	Sec61a2 (ENSPEMG00000010203)	Nudt5 (ENSPEMG00000017964)	Cdc123 (ENSPEMG00000000078)	Camk1d (ENSPEMG00000009237) #23	Ccdc3 (ENSPEMG00000010385)	Optn (ENSPEMG00000000071)	Mcm10 (ENSPEMG00000008646)	Ucma (ENSPEMG00000010656) #24	Phyh (ENSPEMG00000013360)	Sephs1 (ENSPEMG00000014445)	ENSPEMG00000007132	ENSPEMG00000002513	Prpf18 (ENSPEMG00000013704)	ENSPEMG00000029697	Frmd4a (ENSPEMG00000008028)
Murinae	ANCESTRAL SPECIES	27	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00860000135956	ENSGT00860000135638	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Mus	ANCESTRAL SPECIES	18	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00860000135956	ENSGT00860000135638	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Mus_A	ANCESTRAL SPECIES		ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00860000135956	ENSGT00860000135638	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00860000135956	ENSGT00860000135638	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Mus_C	ANCESTRAL SPECIES	30	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00900000143702	ENSGT00710000106806 #20	ENSGT00860000135956	ENSGT00860000135638	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Steppe mouse	MODERN SPECIES	3182									ENSMSIG00000017429	Celf2 (ENSMSIG00000017150) #21	Usp6nl (ENSMSIG00000017084)	Echdc3 (ENSMSIG00000017055)	ENSMSIG00000017044	Proser2 (ENSMSIG00000017006)	Upf2 (ENSMSIG00000016924)	Dhtkd1 (ENSMSIG00000016831) #22	Sec61a2 (ENSMSIG00000016688)	Gm13199 (ENSMSIG00000016674)	Nudt5 (ENSMSIG00000016635)	Cdc123 (ENSMSIG00000016600)	Camk1d (ENSMSIG00000016495) #23
spretus	MODERN SPECIES	11	MGP_SPRETEiJ_G0024089	Sfmbt2 (MGP_SPRETEiJ_G0024088)	Itih5 (MGP_SPRETEiJ_G0024087)	Itih2 (MGP_SPRETEiJ_G0024086)	Kin (MGP_SPRETEiJ_G0024085)	Atp5c1 (MGP_SPRETEiJ_G0024084)	Taf3 (MGP_SPRETEiJ_G0024083) #20	MGP_SPRETEiJ_G0024082	MGP_SPRETEiJ_G0024081	Gata3 (MGP_SPRETEiJ_G0024080)	Celf2 (MGP_SPRETEiJ_G0024079) #21	Usp6nl (MGP_SPRETEiJ_G0024078)	Echdc3 (MGP_SPRETEiJ_G0024077)	Proser2 (MGP_SPRETEiJ_G0024076)	Upf2 (MGP_SPRETEiJ_G0024075)	Dhtkd1 (MGP_SPRETEiJ_G0024074) #22	Sec61a2 (MGP_SPRETEiJ_G0024073)	MGP_SPRETEiJ_G0024072	Nudt5 (MGP_SPRETEiJ_G0024071)	Cdc123 (MGP_SPRETEiJ_G0024070)	Camk1d (MGP_SPRETEiJ_G0024069) #23	Ccdc3 (MGP_SPRETEiJ_G0024068)	Optn (MGP_SPRETEiJ_G0024067)	Mcm10 (MGP_SPRETEiJ_G0024066)	Ucma (MGP_SPRETEiJ_G0024065) #24	Phyh (MGP_SPRETEiJ_G0024064)	Sephs1 (MGP_SPRETEiJ_G0024063)	Bend7 (MGP_SPRETEiJ_G0024062)	Prpf18 (MGP_SPRETEiJ_G0024061)	Frmd4a (MGP_SPRETEiJ_G0024060)	MGP_SPRETEiJ_G0024059
Mouse	MODERN SPECIES	11	Pfkfb3 (ENSMUSG00000026773)	Prkcq (ENSMUSG00000026778)	Sfmbt2 (ENSMUSG00000061186)	Itih5 (ENSMUSG00000025780)	Itih2 (ENSMUSG00000037254)	Kin (ENSMUSG00000037262)	Atp5c1 (ENSMUSG00000025781)	Taf3 (ENSMUSG00000025782) #20	Gata3 (ENSMUSG00000015619)	Celf2 (ENSMUSG00000002107) #21	Usp6nl (ENSMUSG00000039046)	1700014B07Rik (ENSMUSG00000118578)	Echdc3 (ENSMUSG00000039063)	Proser2 (ENSMUSG00000045319)	Upf2 (ENSMUSG00000043241)	Dhtkd1 (ENSMUSG00000025815) #22	Sec61a2 (ENSMUSG00000025816)	Gm13199 (ENSMUSG00000056718)	Nudt5 (ENSMUSG00000025817)	Cdc123 (ENSMUSG00000039128)	Camk1d (ENSMUSG00000039145) #23	Ccdc3 (ENSMUSG00000026676)	Optn (ENSMUSG00000026672)	Mcm10 (ENSMUSG00000026669)	Ucma (ENSMUSG00000026668) #24	Phyh (ENSMUSG00000026664)	Sephs1 (ENSMUSG00000026662)	Bend7 (ENSMUSG00000048186)	Prpf18 (ENSMUSG00000039449)	Frmd4a (ENSMUSG00000026657)	Fam107b (ENSMUSG00000026655)
Ryukyu mouse	MODERN SPECIES	11	Prkcq (MGP_CAROLIEiJ_G0023171)	Sfmbt2 (MGP_CAROLIEiJ_G0023170)	Itih5 (MGP_CAROLIEiJ_G0023169)	Itih2 (MGP_CAROLIEiJ_G0023168)	Kin (MGP_CAROLIEiJ_G0023167)	Atp5c1 (MGP_CAROLIEiJ_G0023166)	Taf3 (MGP_CAROLIEiJ_G0023165) #20	MGP_CAROLIEiJ_G0023164	MGP_CAROLIEiJ_G0023163	Gata3 (MGP_CAROLIEiJ_G0023162)	Celf2 (MGP_CAROLIEiJ_G0023161) #21	Usp6nl (MGP_CAROLIEiJ_G0023160)	Echdc3 (MGP_CAROLIEiJ_G0023159)	Proser2 (MGP_CAROLIEiJ_G0023158)	Upf2 (MGP_CAROLIEiJ_G0023157)	Dhtkd1 (MGP_CAROLIEiJ_G0023156) #22	Sec61a2 (MGP_CAROLIEiJ_G0023155)	MGP_CAROLIEiJ_G0023154	Nudt5 (MGP_CAROLIEiJ_G0023153)	Cdc123 (MGP_CAROLIEiJ_G0023152)	Camk1d (MGP_CAROLIEiJ_G0023151) #23	Ccdc3 (MGP_CAROLIEiJ_G0023150)	Optn (MGP_CAROLIEiJ_G0023149)	Mcm10 (MGP_CAROLIEiJ_G0023148)	Ucma (MGP_CAROLIEiJ_G0023147) #24	Phyh (MGP_CAROLIEiJ_G0023146)	Sephs1 (MGP_CAROLIEiJ_G0023145)	Bend7 (MGP_CAROLIEiJ_G0023144)	Prpf18 (MGP_CAROLIEiJ_G0023143)	Frmd4a (MGP_CAROLIEiJ_G0023142)	MGP_CAROLIEiJ_G0023141
Shrew mouse	MODERN SPECIES	7	Prkcq (MGP_PahariEiJ_G0019231)	Sfmbt2 (MGP_PahariEiJ_G0019230)	Itih5 (MGP_PahariEiJ_G0019229)	Itih2 (MGP_PahariEiJ_G0019228)	Kin (MGP_PahariEiJ_G0019227)	Atp5c1 (MGP_PahariEiJ_G0019226)	Taf3 (MGP_PahariEiJ_G0019225) #20	MGP_PahariEiJ_G0019224	MGP_PahariEiJ_G0019223	Gata3 (MGP_PahariEiJ_G0019222)	Celf2 (MGP_PahariEiJ_G0019221) #21	Usp6nl (MGP_PahariEiJ_G0019220)	Echdc3 (MGP_PahariEiJ_G0019219)	Proser2 (MGP_PahariEiJ_G0019218)	Upf2 (MGP_PahariEiJ_G0019217)	Dhtkd1 (MGP_PahariEiJ_G0019216) #22	Sec61a2 (MGP_PahariEiJ_G0019215)	MGP_PahariEiJ_G0019214	Nudt5 (MGP_PahariEiJ_G0019213)	Cdc123 (MGP_PahariEiJ_G0019212)	Camk1d (MGP_PahariEiJ_G0019211) #23	Ccdc3 (MGP_PahariEiJ_G0019210)	Optn (MGP_PahariEiJ_G0019209)	Mcm10 (MGP_PahariEiJ_G0019208)	Ucma (MGP_PahariEiJ_G0019207) #24	Phyh (MGP_PahariEiJ_G0019206)	Sephs1 (MGP_PahariEiJ_G0019205)	Bend7 (MGP_PahariEiJ_G0019204)	Prpf18 (MGP_PahariEiJ_G0019203)	Frmd4a (MGP_PahariEiJ_G0019202)	MGP_PahariEiJ_G0019201
Rat	MODERN SPECIES	8	Pfkfb3 (ENSRNOG00000018911)	Prkcq (ENSRNOG00000019057)	Sfmbt2 (ENSRNOG00000029235)	Itih5 (ENSRNOG00000049614)	Itih2 (ENSRNOG00000001066)	Kin (ENSRNOG00000026690)	Atp5f1c (ENSRNOG00000019223) #20	Gata3 (ENSRNOG00000019336)	ENSRNOG00000063235	Celf2 (ENSRNOG00000023661) #21	ENSRNOG00000067224	Usp6nl (ENSRNOG00000017644)	Echdc3 (ENSRNOG00000048114)	Proser2 (ENSRNOG00000045553)	Upf2 (ENSRNOG00000023593)	Dhtkd1 (ENSRNOG00000023587) #22	Sec61a2 (ENSRNOG00000023278)	Nudt5 (ENSRNOG00000017741)	Cdc123 (ENSRNOG00000017770)	Camk1d (ENSRNOG00000017882) #23	ENSRNOG00000066940	Ccdc3 (ENSRNOG00000017933)	Optn (ENSRNOG00000017941)	Mcm10 (ENSRNOG00000017981)	Ucma (ENSRNOG00000017987) #24	Phyh (ENSRNOG00000018044)	Sephs1 (ENSRNOG00000018125)	Bend7 (ENSRNOG00000022712)	Prpf18 (ENSRNOG00000018396)	Fbxl14-ps1 (ENSRNOG00000000021)	AABR07028615.1 (ENSRNOG00000018500)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1047																Dhtkd1 (ENSNGAG00000002658) #22	Sec61a2 (ENSNGAG00000013895)	Nudt5 (ENSNGAG00000000956)
Lesser Egyptian jerboa	MODERN SPECIES	91	Prkcq (ENSJJAG00000011158)	Sfmbt2 (ENSJJAG00000001612)	Itih5 (ENSJJAG00000016199)	Itih2 (ENSJJAG00000019741)	Kin (ENSJJAG00000021735)	ENSJJAG00000021061	Taf3 (ENSJJAG00000014504) #20	Gata3 (ENSJJAG00000024256)	ENSJJAG00000023769	Celf2 (ENSJJAG00000011472) #21	Usp6nl (ENSJJAG00000021654)	ENSJJAG00000007918	Echdc3 (ENSJJAG00000001006)	Proser2 (ENSJJAG00000021818)	Upf2 (ENSJJAG00000004913)	Dhtkd1 (ENSJJAG00000023454) #22	Sec61a2 (ENSJJAG00000012177)	ENSJJAG00000011240	Cdc123 (ENSJJAG00000001048)	Camk1d (ENSJJAG00000010010) #23	Ccdc3 (ENSJJAG00000020644)	ENSJJAG00000005756	ENSJJAG00000015907	Optn (ENSJJAG00000018508)	Mcm10 (ENSJJAG00000023058)	Phyh (ENSJJAG00000020687)	Sephs1 (ENSJJAG00000018457)	ENSJJAG00000014485	ENSJJAG00000010652	ENSJJAG00000024041	ENSJJAG00000009954
Kangaroo rat	MODERN SPECIES	343									ENSDORG00000027790	Celf2 (ENSDORG00000006455) #21	Usp6nl (ENSDORG00000025361)	Echdc3 (ENSDORG00000023522)	Proser2 (ENSDORG00000025044)	Upf2 (ENSDORG00000002478)	ENSDORG00000016049	Dhtkd1 (ENSDORG00000002480) #22	Sec61a2 (ENSDORG00000002481)	Nudt5 (ENSDORG00000002482)	Cdc123 (ENSDORG00000010544)	Camk1d (ENSDORG00000011314) #23	Ccdc3 (ENSDORG00000005802)	Optn (ENSDORG00000005803)	Mcm10 (ENSDORG00000006767)	Ucma (ENSDORG00000006769) #24	Sephs1 (ENSDORG00000014119)	ENSDORG00000013433	Prpf18 (ENSDORG00000000858)	ENSDORG00000000862	ENSDORG00000008449	Cdnf (ENSDORG00000004463)	Gm45902 (ENSDORG00000029121)
Lagomorpha	ANCESTRAL SPECIES	94	ENSGT00790000123099	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b
Rabbit	MODERN SPECIES	7	ITIH5 (ENSOCUG00000016945)	ENSOCUG00000036255	ITIH2 (ENSOCUG00000004620)	KIN (ENSOCUG00000004637)	ATP5F1C (ENSOCUG00000004642)	TAF3 (ENSOCUG00000027324) #20	GATA3 (ENSOCUG00000017821)	ENSOCUG00000027930	ENSOCUG00000007168	CELF2 (ENSOCUG00000004961) #21	ENSOCUG00000031347	USP6NL (ENSOCUG00000007066)	ECHDC3 (ENSOCUG00000009149)	PROSER2 (ENSOCUG00000006225)	UPF2 (ENSOCUG00000006230)	DHTKD1 (ENSOCUG00000009296) #22	SEC61A2 (ENSOCUG00000009305)	ENSOCUG00000009308	CDC123 (ENSOCUG00000009316)	CAMK1D (ENSOCUG00000011626) #23	ENSOCUG00000011909	CCDC3 (ENSOCUG00000002994)	OPTN (ENSOCUG00000006794)	MCM10 (ENSOCUG00000006801)	UCMA (ENSOCUG00000004118) #24	ENSOCUG00000034835	ENSOCUG00000037607	ENSOCUG00000036950	SEPHS1 (ENSOCUG00000015261)	ENSOCUG00000001218	ENSOCUG00000015244
Pika	MODERN SPECIES	3850																ENSOPRG00000007225 #22	SEC61A2 (ENSOPRG00000007243)	NUDT5 (ENSOPRG00000007256)
Tree shrew	MODERN SPECIES	2400														ENSTBEG00000012642	UPF2 (ENSTBEG00000012679)	ENSTBEG00000013117 #22
Laurasiatheria	ANCESTRAL SPECIES	27	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b
Laurasiatheria_a	ANCESTRAL SPECIES	22	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00990000210817
Laurasiatheria_b	ANCESTRAL SPECIES	22	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Laurasiatheria_c	ANCESTRAL SPECIES	27	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000147516	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Chiroptera	ANCESTRAL SPECIES	69	ENSGT00790000123099	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b
Microchiroptera	ANCESTRAL SPECIES	60	ENSGT00790000123099	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b
Microbat	MODERN SPECIES	1160								ENSMLUG00000004705	ENSMLUG00000025922	ITGA8 (ENSMLUG00000010987)	MINDY3 (ENSMLUG00000013856)	ENSMLUG00000026097	PROSER2 (ENSMLUG00000000222)	UPF2 (ENSMLUG00000000228)	ENSMLUG00000004680	DHTKD1 (ENSMLUG00000010383) #22	SEC61A2 (ENSMLUG00000010427)	NUDT5 (ENSMLUG00000010453)	CDC123 (ENSMLUG00000010474)	ENSMLUG00000029582	CAMK1D (ENSMLUG00000007058) #23	ENSMLUG00000027660	CCDC3 (ENSMLUG00000016950)
Greater horseshoe bat	MODERN SPECIES	30	PRKCQ (ENSRFEG00010016507)	ENSRFEG00010017026	ENSRFEG00010017089	SFMBT2 (ENSRFEG00010017137)	ITIH5 (ENSRFEG00010017244)	ITIH2 (ENSRFEG00010017330)	KIN (ENSRFEG00010017410)	ENSRFEG00010017490	TAF3 (ENSRFEG00010017566) #20	GATA3 (ENSRFEG00010017618)	CELF2 (ENSRFEG00010017749) #21	USP6NL (ENSRFEG00010018309)	ECHDC3 (ENSRFEG00010018583)	ENSRFEG00010018602	UPF2 (ENSRFEG00010018638)	DHTKD1 (ENSRFEG00010018727) #22	SEC61A2 (ENSRFEG00010018824)	NUDT5 (ENSRFEG00010018941)	CDC123 (ENSRFEG00010019035)	CAMK1D (ENSRFEG00010019156) #23	CCDC3 (ENSRFEG00010019204)
Megabat	MODERN SPECIES	642													ECHDC3 (ENSPVAG00000017281)	PROSER2 (ENSPVAG00000017283)	UPF2 (ENSPVAG00000017286)	DHTKD1 (ENSPVAG00000017288) #22	SEC61A2 (ENSPVAG00000017291)	NUDT5 (ENSPVAG00000017294)
Equus	ANCESTRAL SPECIES	44	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000147516	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B.p	ENSGT00390000001775.B.o	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Donkey	MODERN SPECIES	21	PRKCQ (ENSEASG00005019221)	ENSEASG00005024415	SFMBT2 (ENSEASG00005019227)	ITIH5 (ENSEASG00005019230)	ITIH2 (ENSEASG00005019240)	KIN (ENSEASG00005019250)	ATP5F1C (ENSEASG00005019253)	TAF3 (ENSEASG00005019255) #20	GATA3 (ENSEASG00005019258)	CELF2 (ENSEASG00005019262) #21	ENSEASG00005019264	USP6NL (ENSEASG00005019268)	ECHDC3 (ENSEASG00005019270)	PROSER2 (ENSEASG00005019272)	UPF2 (ENSEASG00005019274)	DHTKD1 (ENSEASG00005019275) #22	SEC61A2 (ENSEASG00005019279)	NUDT5 (ENSEASG00005019284)	CDC123 (ENSEASG00005019289)	CAMK1D (ENSEASG00005019291) #23	CCDC3 (ENSEASG00005019294)	OPTN (ENSEASG00005019299)	MCM10 (ENSEASG00005019343)	UCMA (ENSEASG00005019359) #24	ENSEASG00005019364	ENSEASG00005019362	SEPHS1 (ENSEASG00005019368)	ENSEASG00005019370	PRPF18 (ENSEASG00005019373)	FRMD4A (ENSEASG00005019377)	FAM107B (ENSEASG00005030494)
Horse	MODERN SPECIES	21	PFKFB3 (ENSECAG00000012172)	PRKCQ (ENSECAG00000023084)	SFMBT2 (ENSECAG00000021462)	ITIH5 (ENSECAG00000003260)	ITIH2 (ENSECAG00000017637)	KIN (ENSECAG00000013570)	ATP5F1C (ENSECAG00000024684)	TAF3 (ENSECAG00000032801) #20	GATA3 (ENSECAG00000024574)	CELF2 (ENSECAG00000006649) #21	ENSECAG00000056833	USP6NL (ENSECAG00000017248)	ECHDC3 (ENSECAG00000014687)	PROSER2 (ENSECAG00000012476)	UPF2 (ENSECAG00000017022)	DHTKD1 (ENSECAG00000009315) #22	SEC61A2 (ENSECAG00000008105)	NUDT5 (ENSECAG00000023658)	CDC123 (ENSECAG00000010392)	CAMK1D (ENSECAG00000019290) #23	CCDC3 (ENSECAG00000036634)	OPTN (ENSECAG00000007747)	MCM10 (ENSECAG00000024473)	UCMA (ENSECAG00000024146) #24	ENSECAG00000036496	ENSECAG00000029564	SEPHS1 (ENSECAG00000014281)	BEND7 (ENSECAG00000009086)	PRPF18 (ENSECAG00000006997)	FRMD4A (ENSECAG00000013094)	FAM107B (ENSECAG00000010777)
Carnivora	ANCESTRAL SPECIES	26	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Caniformia	ANCESTRAL SPECIES	30	ENSGT00790000123099	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Caniformia_b	ANCESTRAL SPECIES	33	ENSGT00790000123099	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Ursidae	ANCESTRAL SPECIES	46	ENSGT00790000123099	ENSGT00950000182835.d.b	ENSGT00940000157638.n	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Ursus	ANCESTRAL SPECIES	145	ENSGT00390000018872	ENSGT00790000123099	ENSGT00950000182835.d.b	ENSGT00940000157638.n	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a.g	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B.j
American black bear	MODERN SPECIES	1284														PROSER2 (ENSUAMG00000023556)	UPF2 (ENSUAMG00000023560)	DHTKD1 (ENSUAMG00000023687) #22	SEC61A2 (ENSUAMG00000023691)	ENSUAMG00000024049
Polar bear	MODERN SPECIES	272	RBM17 (ENSUMAG00000012237)	PFKFB3 (ENSUMAG00000012268)	PRKCQ (ENSUMAG00000012477)	SFMBT2 (ENSUMAG00000012501)	ITIH5 (ENSUMAG00000012552)	ITIH2 (ENSUMAG00000012632)	KIN (ENSUMAG00000012705)	ATP5F1C (ENSUMAG00000012711)	TAF3 (ENSUMAG00000012717) #20	ENSUMAG00000012744	CELF2 (ENSUMAG00000012780) #21	USP6NL (ENSUMAG00000012921)	ECHDC3 (ENSUMAG00000012942)	PROSER2 (ENSUMAG00000012944)	UPF2 (ENSUMAG00000012953)	DHTKD1 (ENSUMAG00000013013) #22	ENSUMAG00000013159	ENSUMAG00000013177	NUDT5 (ENSUMAG00000013187)	CDC123 (ENSUMAG00000013192)	CAMK1D (ENSUMAG00000013243) #23	ENSUMAG00000013285	CCDC3 (ENSUMAG00000013286)	OPTN (ENSUMAG00000013290)	MCM10 (ENSUMAG00000013302)	UCMA (ENSUMAG00000013329) #24
Giant Panda	MODERN SPECIES	6	PFKFB3 (ENSAMEG00000002145)	ENSAMEG00000029166	PRKCQ (ENSAMEG00000015916)	SFMBT2 (ENSAMEG00000000965)	ITIH5 (ENSAMEG00000000893)	ITIH2 (ENSAMEG00000009962)	KIN (ENSAMEG00000009938)	ATP5F1C (ENSAMEG00000009927)	TAF3 (ENSAMEG00000009924) #20	GATA3 (ENSAMEG00000030331)	CELF2 (ENSAMEG00000004946) #21	USP6NL (ENSAMEG00000030656)	ECHDC3 (ENSAMEG00000004621)	PROSER2 (ENSAMEG00000004618)	UPF2 (ENSAMEG00000004586)	DHTKD1 (ENSAMEG00000004548) #22	SEC61A2 (ENSAMEG00000004459)	NUDT5 (ENSAMEG00000004438)	CDC123 (ENSAMEG00000004413)	CAMK1D (ENSAMEG00000017708) #23	CCDC3 (ENSAMEG00000030513)	OPTN (ENSAMEG00000013477)	MCM10 (ENSAMEG00000013505)	UCMA (ENSAMEG00000013530) #24	ENSAMEG00000013554	SEPHS1 (ENSAMEG00000013555)	ENSAMEG00000013584	PRPF18 (ENSAMEG00000013591)	FRMD4A (ENSAMEG00000013617)	ENSAMEG00000030477	FAM107B (ENSAMEG00000001488)
Mustelinae	ANCESTRAL SPECIES	83														ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B.l	ENSGT00390000001775.B.k	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
American mink	MODERN SPECIES	327														PROSER2 (ENSNVIG00000021623)	UPF2 (ENSNVIG00000021663)	DHTKD1 (ENSNVIG00000021838) #22	SEC61A2 (ENSNVIG00000021980)	NUDT5 (ENSNVIG00000022194)	CDC123 (ENSNVIG00000022386)	CAMK1D (ENSNVIG00000022517) #23	ENSNVIG00000022566	CCDC3 (ENSNVIG00000022626)	OPTN (ENSNVIG00000022685)	MCM10 (ENSNVIG00000022890)	UCMA (ENSNVIG00000022961) #24	ENSNVIG00000022989	ENSNVIG00000023026	SEPHS1 (ENSNVIG00000023046)	ENSNVIG00000023082	ATP12A (ENSNVIG00000023102)	RNF17 (ENSNVIG00000023153)
Ferret	MODERN SPECIES	365														PROSER2 (ENSMPUG00000001072)	UPF2 (ENSMPUG00000001064)	DHTKD1 (ENSMPUG00000001060) #22	SEC61A2 (ENSMPUG00000001058)	NUDT5 (ENSMPUG00000001054)	CDC123 (ENSMPUG00000001047)	ENSMPUG00000018526	ENSMPUG00000001025	CAMK1D (ENSMPUG00000001021) #23	OPTN (ENSMPUG00000000984)	MCM10 (ENSMPUG00000000978)	UCMA (ENSMPUG00000000957) #24	ENSMPUG00000000952	ENSMPUG00000000950	SEPHS1 (ENSMPUG00000000948)	ENSMPUG00000000942	PRPF18 (ENSMPUG00000000938)	FRMD4A (ENSMPUG00000000936)
Canidae	ANCESTRAL SPECIES	29	ENSGT00790000123099	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B.m.b	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00970000198164	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B.m.b	ENSGT00390000000950.c.b.m	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Dog	MODERN SPECIES	11	ENSCAFG00845001650	PRKCQ (ENSCAFG00845001589)	SFMBT2 (ENSCAFG00845001504)	ITIH5 (ENSCAFG00845001478)	ITIH2 (ENSCAFG00845001377)	KIN (ENSCAFG00845001238)	ATP5F1C (ENSCAFG00845001207)	TAF3 (ENSCAFG00845001170) #20	GATA3 (ENSCAFG00845001133)	CELF2 (ENSCAFG00845000818) #21	ENSCAFG00845000593	USP6NL (ENSCAFG00845000518)	ECHDC3 (ENSCAFG00845000459)	PROSER2 (ENSCAFG00845000440)	UPF2 (ENSCAFG00845000426)	DHTKD1 (ENSCAFG00845000401) #22	SEC61A2 (ENSCAFG00845000338)	NUDT5 (ENSCAFG00845000267)	CDC123 (ENSCAFG00845000210)	CAMK1D (ENSCAFG00845000194) #23	CCDC3 (ENSCAFG00845000166)	OPTN (ENSCAFG00845000154)	UCMA (ENSCAFG00845017668) #24	PHYH (ENSCAFG00845017191)	SEPHS1 (ENSCAFG00845016701)	ENSCAFG00845016449	PRPF18 (ENSCAFG00845016307)	FRMD4A (ENSCAFG00845015450)	FAM107B (ENSCAFG00845015203)	ENSCAFG00845015048	CDNF (ENSCAFG00845015027)
Dingo	MODERN SPECIES	98	ITIH2 (ENSCAFG00020005557)	KIN (ENSCAFG00020005737)	ATP5F1C (ENSCAFG00020005749)	TAF3 (ENSCAFG00020005761) #20	GATA3 (ENSCAFG00020005766)	ENSCAFG00020005789	ENSCAFG00020005813	ENSCAFG00020005815	CELF2 (ENSCAFG00020005823) #21	ENSCAFG00020005827	USP6NL (ENSCAFG00020005829)	ENSCAFG00020005847	ECHDC3 (ENSCAFG00020005851)	PROSER2 (ENSCAFG00020005859)	UPF2 (ENSCAFG00020005882)	DHTKD1 (ENSCAFG00020006153) #22	SEC61A2 (ENSCAFG00020006242)	NUDT5 (ENSCAFG00020007339)	ENSCAFG00020007368	CAMK1D (ENSCAFG00020007409) #23	ENSCAFG00020007418	CCDC3 (ENSCAFG00020007419)	ENSCAFG00020007423	OPTN (ENSCAFG00020007430)	MCM10 (ENSCAFG00020007556)	UCMA (ENSCAFG00020007582) #24	ENSCAFG00020007605	ENSCAFG00020007612	ENSCAFG00020007623	ENSCAFG00020007631	ENSCAFG00020007661
Red fox	MODERN SPECIES	4	PFKFB3 (ENSVVUG00000006741)	PRKCQ (ENSVVUG00000006707)	SFMBT2 (ENSVVUG00000006656)	ITIH5 (ENSVVUG00000006621)	ITIH2 (ENSVVUG00000006602)	KIN (ENSVVUG00000006589)	ATP5F1C (ENSVVUG00000006574)	TAF3 (ENSVVUG00000006553) #20	GATA3 (ENSVVUG00000006488)	ENSVVUG00000006456	CELF2 (ENSVVUG00000006430) #21	USP6NL (ENSVVUG00000006223)	ECHDC3 (ENSVVUG00000006188)	PROSER2 (ENSVVUG00000006180)	UPF2 (ENSVVUG00000006166)	DHTKD1 (ENSVVUG00000006105) #22	ENSVVUG00000006050	ENSVVUG00000006043	NUDT5 (ENSVVUG00000006035)	ENSVVUG00000006027	ENSVVUG00000006012	CAMK1D (ENSVVUG00000005962) #23	CCDC3 (ENSVVUG00000005918)	OPTN (ENSVVUG00000005909)	UCMA (ENSVVUG00000005891) #24	ENSVVUG00000005613	ENSVVUG00000005590	SEPHS1 (ENSVVUG00000005564)	MCM10 (ENSVVUG00000005499)	ENSVVUG00000005487	PRPF18 (ENSVVUG00000005453)
Felidae	ANCESTRAL SPECIES	2	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b.g	ENSGT00390000014429.b.h	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Panthera	ANCESTRAL SPECIES		ENSGT00940000157638.l	ENSGT00940000157638.k.a	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b.g	ENSGT00390000014429.b.h	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
Tiger	MODERN SPECIES	158			ENSPTIG00000006458	ENSPTIG00000007037	ITIH5 (ENSPTIG00000007876)	ITIH2 (ENSPTIG00000010177)	KIN (ENSPTIG00000014111)	ATP5F1C (ENSPTIG00000016029)	TAF3 (ENSPTIG00000017834) #20	GATA3 (ENSPTIG00000018648)	CELF2 (ENSPTIG00000019418) #21	ENSPTIG00000005905	USP6NL (ENSPTIG00000005609)	ECHDC3 (ENSPTIG00000008478)	UPF2 (ENSPTIG00000008867)	DHTKD1 (ENSPTIG00000010663) #22	SEC61A2 (ENSPTIG00000012959)	NUDT5 (ENSPTIG00000014985)	CDC123 (ENSPTIG00000019118)	ENSPTIG00000007689
Panthera_a	ANCESTRAL SPECIES	5	ENSGT00940000157638.l	ENSGT00940000157638.k.a	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00910000148495	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b.g	ENSGT00390000014429.b.h	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b
leopard	MODERN SPECIES	36	PFKFB3 (ENSPPRG00000023517)	PRKCQ (ENSPPRG00000000910)	SFMBT2 (ENSPPRG00000002328)	ITIH5 (ENSPPRG00000002534)	ITIH2 (ENSPPRG00000004089)	KIN (ENSPPRG00000004708)	ATP5F1C (ENSPPRG00000004995)	TAF3 (ENSPPRG00000005355) #20	GATA3 (ENSPPRG00000005677)	ENSPPRG00000005805	CELF2 (ENSPPRG00000021517) #21	ENSPPRG00000022272	USP6NL (ENSPPRG00000024032)	ECHDC3 (ENSPPRG00000023817)	UPF2 (ENSPPRG00000000690)	DHTKD1 (ENSPPRG00000001498) #22	SEC61A2 (ENSPPRG00000003459)	NUDT5 (ENSPPRG00000004810)	CDC123 (ENSPPRG00000005189)	ENSPPRG00000005466	ENSPPRG00000006450	ENSPPRG00000007077	CAMK1D (ENSPPRG00000008477) #23	ENSPPRG00000008706	CCDC3 (ENSPPRG00000008988)	OPTN (ENSPPRG00000013701)	MCM10 (ENSPPRG00000024643)	UCMA (ENSPPRG00000024482) #24	PHYH (ENSPPRG00000024217)	SEPHS1 (ENSPPRG00000023204)	ENSPPRG00000022692
lion	MODERN SPECIES	7	PFKFB3 (ENSPLOG00000009912)	PRKCQ (ENSPLOG00000010190)	SFMBT2 (ENSPLOG00000010406)	ITIH5 (ENSPLOG00000010454)	ITIH2 (ENSPLOG00000010623)	KIN (ENSPLOG00000010868)	ATP5F1C (ENSPLOG00000010897)	TAF3 (ENSPLOG00000010932) #20	GATA3 (ENSPLOG00000011003)	CELF2 (ENSPLOG00000011178) #21	ENSPLOG00000011647	USP6NL (ENSPLOG00000011688)	ECHDC3 (ENSPLOG00000011982)	PROSER2 (ENSPLOG00000012028)	UPF2 (ENSPLOG00000012062)	DHTKD1 (ENSPLOG00000012128) #22	SEC61A2 (ENSPLOG00000012310)	NUDT5 (ENSPLOG00000012462)	CDC123 (ENSPLOG00000012632)	CAMK1D (ENSPLOG00000012942) #23	ENSPLOG00000013022	ENSPLOG00000013101	CCDC3 (ENSPLOG00000010769)	OPTN (ENSPLOG00000010860)	MCM10 (ENSPLOG00000010927)	UCMA (ENSPLOG00000011016) #24	PHYH (ENSPLOG00000011127)	SEPHS1 (ENSPLOG00000011305)	BEND7 (ENSPLOG00000011419)	PRPF18 (ENSPLOG00000011562)	FRMD4A (ENSPLOG00000011639)
Cat	MODERN SPECIES	238	RBM17 (ENSFCAG00000031988)	PFKFB3 (ENSFCAG00000004933)	PRKCQ (ENSFCAG00000009472)	SFMBT2 (ENSFCAG00000011184)	ITIH5 (ENSFCAG00000011191)	ITIH2 (ENSFCAG00000000194)	KIN (ENSFCAG00000000195)	ATP5F1C (ENSFCAG00000000196)	TAF3 (ENSFCAG00000000197) #20	GATA3 (ENSFCAG00000042993)	CELF2 (ENSFCAG00000004738) #21	USP6NL (ENSFCAG00000015584)	ECHDC3 (ENSFCAG00000023345)	PROSER2 (ENSFCAG00000046341)	UPF2 (ENSFCAG00000005785)	DHTKD1 (ENSFCAG00000012864) #22	SEC61A2 (ENSFCAG00000006045)	NUDT5 (ENSFCAG00000034165)	CDC123 (ENSFCAG00000025803)	CAMK1D (ENSFCAG00000014848) #23	ENSFCAG00000035079	CCDC3 (ENSFCAG00000030959)	OPTN (ENSFCAG00000003917)	UCMA (ENSFCAG00000045703) #24	PHYH (ENSFCAG00000003920)	SEPHS1 (ENSFCAG00000003921)	BEND7 (ENSFCAG00000004435)	PRPF18 (ENSFCAG00000004436)	FRMD4A (ENSFCAG00000004437)	FAM107B (ENSFCAG00000036668)	CDNF (ENSFCAG00000009153)
Artiodactyla	ANCESTRAL SPECIES	27	ENSGT00790000123099.`c.a	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00940000153661.b.b	ENSGT00940000153661.a.a	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000154811.A	ENSGT00940000153498.B.a	ENSGT00390000005508.b	ENSGT00940000156105
Suina	ANCESTRAL SPECIES	44	ENSGT00790000123099.`c.a	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00940000161191.A	ENSGT01090000260098.B	ENSGT00940000154453.a.b.b	ENSGT00940000164101.a	ENSGT00940000156952	ENSGT00940000154926	ENSGT00950000183214.a.b.a.a	ENSGT00940000157169	ENSGT01090000259987.a.b	ENSGT00390000009751
Chacoan peccary	MODERN SPECIES	957	RBM17 (ENSCWAG00000020190)	PFKFB3 (ENSCWAG00000020211)	PRKCQ (ENSCWAG00000020285)	SFMBT2 (ENSCWAG00000020598)	ITIH5 (ENSCWAG00000020626)	ITIH2 (ENSCWAG00000020654)	KIN (ENSCWAG00000020739)	ATP5F1C (ENSCWAG00000020749)	TAF3 (ENSCWAG00000020773) #20	GATA3 (ENSCWAG00000020780)	CELF2 (ENSCWAG00000020806) #21	USP6NL (ENSCWAG00000020901)	ECHDC3 (ENSCWAG00000020980)	PROSER2 (ENSCWAG00000020993)	UPF2 (ENSCWAG00000020999)	DHTKD1 (ENSCWAG00000021019) #22	SEC61A2 (ENSCWAG00000021042)	NUDT5 (ENSCWAG00000021073)	CDC123 (ENSCWAG00000021088)	CAMK1D (ENSCWAG00000021114) #23	CCDC3 (ENSCWAG00000021137)	FZD8 (ENSCWAG00000021149)	CCNY (ENSCWAG00000021160)	ENSCWAG00000021175	ENSCWAG00000021177	CREM (ENSCWAG00000021285)	CUL2 (ENSCWAG00000021527)	PARD3 (ENSCWAG00000021578)	NRP1 (ENSCWAG00000021658)	ITGB1 (ENSCWAG00000021681)	ENSCWAG00000021687
Pig	MODERN SPECIES	1	PFKFB3 (ENSSSCG00000011133)	PRKCQ (ENSSSCG00000011131)	SFMBT2 (ENSSSCG00000024480)	ITIH5 (ENSSSCG00000011129)	ITIH2 (ENSSSCG00000011128)	KIN (ENSSSCG00000033095)	ATP5F1C (ENSSSCG00000034086)	TAF3 (ENSSSCG00000011127) #20	GATA3 (ENSSSCG00000011125)	CELF2 (ENSSSCG00000011121) #21	ENSSSCG00000046967	USP6NL (ENSSSCG00000011120)	ECHDC3 (ENSSSCG00000011119)	PROSER2 (ENSSSCG00000022247)	UPF2 (ENSSSCG00000011117)	DHTKD1 (ENSSSCG00000039539) #22	SEC61A2 (ENSSSCG00000011114)	NUDT5 (ENSSSCG00000011113)	CDC123 (ENSSSCG00000011112)	CAMK1D (ENSSSCG00000011111) #23	CCDC3 (ENSSSCG00000011110)	FZD8 (ENSSSCG00000033001)	ENSSSCG00000036044	CCNY (ENSSSCG00000011107)	ENSSSCG00000024021	ENSSSCG00000011106	ENSSSCG00000052364	CUL2 (ENSSSCG00000011104)	PARD3 (ENSSSCG00000011103)	NRP1 (ENSSSCG00000011102)	ITGB1 (ENSSSCG00000011101)
Artiodactyla_a	ANCESTRAL SPECIES	29	ENSGT00790000123099.`c.b	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00940000153661.b.b	ENSGT00940000153661.a.a	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000154811.A	ENSGT00940000153498.B.a	ENSGT00390000005508.b	ENSGT00940000156105
Artiodactyla_b	ANCESTRAL SPECIES	27	ENSGT00790000123099.`c.b	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00860000136052	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00940000153661.a.a	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000154811.A	ENSGT00940000153498.B.a	ENSGT00390000005508.b	ENSGT00940000156105	ENSGT00940000154453.a.b.b
Cetacea	ANCESTRAL SPECIES	2	ENSGT00790000123099.`c.a	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b.g.a	ENSGT00860000136052	ENSGT00390000003721.d.b.g.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00940000153661.a.a	ENSGT01030000234637.a.b.b.r	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000154811.A	ENSGT00940000153498.B.a	ENSGT00390000005508.b
Odontoceti	ANCESTRAL SPECIES	2	ENSGT00790000123099.`c.b	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b.g.a	ENSGT00860000136052	ENSGT00390000003721.d.b.g.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00940000153661.a.a	ENSGT01030000234637.a.b.b.r	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000154811.A	ENSGT00940000153498.B.a	ENSGT00390000005508.b
Odontoceti_a	ANCESTRAL SPECIES	2	ENSGT00790000123099.`c.b	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b.g.a	ENSGT00860000136052	ENSGT00390000003721.d.b.g.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00940000153661.a.a	ENSGT01030000234637.a.b.b.r	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000154811.A	ENSGT00940000153498.B.a	ENSGT00390000005508.b
Odontoceti_b	ANCESTRAL SPECIES	2	ENSGT00790000123099.`c.b	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b.g.a	ENSGT00860000136052	ENSGT00390000003721.d.b.g.b.a	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014165.c.a.b.b.b.e.b	ENSGT00390000014429.b	ENSGT00940000153661.a.a	ENSGT01030000234637.a.b.b.r	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000154811.A	ENSGT00940000153498.B.a
Monodontidae	ANCESTRAL SPECIES	22	ENSGT00790000123099.`c.b	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b.g.a	ENSGT00860000136052	ENSGT00390000003721.d.b.g.b.a	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014165.c.a.b.b.b.e.b	ENSGT00390000014429.b	ENSGT01030000234637.a.b.b.r	ENSGT00940000153661.a.a	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000154811.A	ENSGT00940000153498.B.a
Beluga whale	MODERN SPECIES	22	PFKFB3 (ENSDLEG00000013561)	PRKCQ (ENSDLEG00000013837)	ENSDLEG00000014675	ENSDLEG00000014702	ITIH5 (ENSDLEG00000004068)	ITIH2 (ENSDLEG00000004107)	KIN (ENSDLEG00000004242)	ATP5C1 (ENSDLEG00000004250)	TAF3 (ENSDLEG00000004260) #20	GATA3 (ENSDLEG00000004269)	CELF2 (ENSDLEG00000004304) #21	USP6NL (ENSDLEG00000004378)	ENSDLEG00000004398	PROSER2 (ENSDLEG00000004408)	UPF2 (ENSDLEG00000004415)	DHTKD1 (ENSDLEG00000004431) #22	ENSDLEG00000004463	ENSDLEG00000004478	NUDT5 (ENSDLEG00000004487)	CDC123 (ENSDLEG00000004498)	CAMK1D (ENSDLEG00000004516) #23	CCDC3 (ENSDLEG00000004525)	ENSDLEG00000004527	ANKRD26 (ENSDLEG00000004565)	YME1L1 (ENSDLEG00000004656)	ENSDLEG00000004666	MASTL (ENSDLEG00000004669)	ACBD5 (ENSDLEG00000004686)	ABI1 (ENSDLEG00000004700)	PDSS1 (ENSDLEG00000004718)	ENSDLEG00000004733
Narwhal	MODERN SPECIES	308	PFKFB3 (ENSMMNG00015017388)	PRKCQ (ENSMMNG00015017162)	ENSMMNG00015017079	SFMBT2 (ENSMMNG00015017052)	ITIH5 (ENSMMNG00015016997)	ITIH2 (ENSMMNG00015016956)	KIN (ENSMMNG00015016917)	ATP5F1C (ENSMMNG00015016884)	TAF3 (ENSMMNG00015016836) #20	GATA3 (ENSMMNG00015016810)	CELF2 (ENSMMNG00015016638) #21	USP6NL (ENSMMNG00015016486)	ENSMMNG00015016430	PROSER2 (ENSMMNG00015016407)	UPF2 (ENSMMNG00015016353)	DHTKD1 (ENSMMNG00015016221) #22	ENSMMNG00015015938	ENSMMNG00015015766	NUDT5 (ENSMMNG00015015714)	CDC123 (ENSMMNG00015015640)	CAMK1D (ENSMMNG00015015592) #23	ENSMMNG00015015568	CCDC3 (ENSMMNG00015017596)	ANKRD26 (ENSMMNG00015017325)	ENSMMNG00015017231	YME1L1 (ENSMMNG00015017184)	MASTL (ENSMMNG00015017123)	ACBD5 (ENSMMNG00015016999)	ABI1 (ENSMMNG00015016765)	PDSS1 (ENSMMNG00015016593)	APBB1IP (ENSMMNG00015016536)
Vaquita	MODERN SPECIES	11	RBM17 (ENSPSNG00000000607)	PFKFB3 (ENSPSNG00000000526)	PRKCQ (ENSPSNG00000000301)	SFMBT2 (ENSPSNG00000000114)	ENSPSNG00000000060	ITIH5 (ENSPSNG00000019696)	ITIH2 (ENSPSNG00000019421)	KIN (ENSPSNG00000019341)	ATP5F1C (ENSPSNG00000019251)	TAF3 (ENSPSNG00000019203) #20	GATA3 (ENSPSNG00000019164)	CELF2 (ENSPSNG00000018954) #21	USP6NL (ENSPSNG00000018768)	PROSER2 (ENSPSNG00000018695)	UPF2 (ENSPSNG00000018347)	DHTKD1 (ENSPSNG00000018287) #22	ENSPSNG00000018133	ENSPSNG00000018039	NUDT5 (ENSPSNG00000017967)	CDC123 (ENSPSNG00000017878)	ENSPSNG00000017826	CAMK1D (ENSPSNG00000017788) #23	ENSPSNG00000017768	CCDC3 (ENSPSNG00000017725)	ENSPSNG00000017653	ENSPSNG00000017613	YME1L1 (ENSPSNG00000017478)	MASTL (ENSPSNG00000017353)	ACBD5 (ENSPSNG00000016966)	ABI1 (ENSPSNG00000016723)	PDSS1 (ENSPSNG00000016619)
Dolphin	MODERN SPECIES	6394																DHTKD1 (ENSTTRG00000007399) #22	SEC61A2 (ENSTTRG00000007395)	NUDT5 (ENSTTRG00000007394)
Sperm whale	MODERN SPECIES	2	ENSPCTG00005004454	PFKFB3 (ENSPCTG00005004371)	PRKCQ (ENSPCTG00005004106)	ENSPCTG00005004068	SFMBT2 (ENSPCTG00005004060)	ITIH5 (ENSPCTG00005004041)	ITIH2 (ENSPCTG00005003986)	KIN (ENSPCTG00005003946)	ATP5F1C (ENSPCTG00005003924)	TAF3 (ENSPCTG00005003910) #20	GATA3 (ENSPCTG00005003895)	CELF2 (ENSPCTG00005003796) #21	USP6NL (ENSPCTG00005003752)	PROSER2 (ENSPCTG00005003747)	UPF2 (ENSPCTG00005003703)	DHTKD1 (ENSPCTG00005003657) #22	SEC61A2 (ENSPCTG00005003601)	NUDT5 (ENSPCTG00005003572)	CDC123 (ENSPCTG00005003548)	CAMK1D (ENSPCTG00005003528) #23	CCDC3 (ENSPCTG00005003513)	ENSPCTG00005003506	ENSPCTG00005003480	ENSPCTG00005003455	YME1L1 (ENSPCTG00005003413)	MASTL (ENSPCTG00005003386)	ACBD5 (ENSPCTG00005003290)	ABI1 (ENSPCTG00005003169)	PDSS1 (ENSPCTG00005003112)	ENSPCTG00005003054	APBB1IP (ENSPCTG00005003012)
Blue whale	MODERN SPECIES	11	PRKCQ (ENSBMSG00010005729)	ENSBMSG00010005682	ENSBMSG00010005677	SFMBT2 (ENSBMSG00010005646)	ITIH5 (ENSBMSG00010005624)	ITIH2 (ENSBMSG00010005568)	ENSBMSG00010005543	ENSBMSG00010005532	TAF3 (ENSBMSG00010005518) #20	GATA3 (ENSBMSG00010005511)	CELF2 (ENSBMSG00010005435) #21	USP6NL (ENSBMSG00010005348)	ECHDC3 (ENSBMSG00010005323)	PROSER2 (ENSBMSG00010005318)	UPF2 (ENSBMSG00010005302)	DHTKD1 (ENSBMSG00010005281) #22	ENSBMSG00010005247	ENSBMSG00010005208	CDC123 (ENSBMSG00010005181)	CAMK1D (ENSBMSG00010005156) #23	ENSBMSG00010005145	CCDC3 (ENSBMSG00010005136)	ENSBMSG00010005091	ENSBMSG00010005060	YME1L1 (ENSBMSG00010005370)	MASTL (ENSBMSG00010005274)	ACBD5 (ENSBMSG00010005242)	ABI1 (ENSBMSG00010005189)	PDSS1 (ENSBMSG00010005161)	ENSBMSG00010005151	APBB1IP (ENSBMSG00010005134)
Pecora	ANCESTRAL SPECIES	9	ENSGT00790000123099.`c.b	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00940000153661.b.b	ENSGT00940000153661.a.a.c.b.a.a	ENSGT00940000153661.a.a.c.b.b	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000154811.A	ENSGT00940000153498.B.a	ENSGT00390000005508.b	ENSGT00940000156105
Percora_a	ANCESTRAL SPECIES	10	ENSGT00790000123099.`c.a	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00940000153661.a.a.c.a	ENSGT00940000153661.a.a.c.b.b	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000154811.A	ENSGT00940000153498.B.a	ENSGT00390000005508.b	ENSGT00940000156105	ENSGT00940000154453.a.b.b
Bovidae	ANCESTRAL SPECIES	10	ENSGT00790000123099.`c.a	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00940000153661.b.b	ENSGT00940000153661.a.a.c.b.a.a.b	ENSGT00940000153661.a.a.c.a	ENSGT00940000153661.a.a.c.b.b	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000154811.A	ENSGT00940000153498.B.a	ENSGT00390000005508.b
Caprinae	ANCESTRAL SPECIES	23	ENSGT00790000123099.`c.a	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00940000153661.a.a.c.a	ENSGT00550000074836	ENSGT00940000157002	ENSGT00940000156350	ENSGT00940000154811.A	ENSGT00940000153498.B.a	ENSGT00390000005508.b	ENSGT00940000156105	ENSGT00940000154453.a.b.b	ENSGT00940000164101.a
Goat	MODERN SPECIES	4	ENSCHIG00000023204	PFKFB3 (ENSCHIG00000023423)	PRKCQ (ENSCHIG00000016059)	SFMBT2 (ENSCHIG00000013417)	ITIH5 (ENSCHIG00000021004)	ITIH2 (ENSCHIG00000023762)	KIN (ENSCHIG00000012913)	ATP5F1C (ENSCHIG00000018328)	TAF3 (ENSCHIG00000006242) #20	GATA3 (ENSCHIG00000025038)	CELF2 (ENSCHIG00000015379) #21	USP6NL (ENSCHIG00000017635)	ECHDC3 (ENSCHIG00000017046)	UPF2 (ENSCHIG00000020359)	PROSER2 (ENSCHIG00000025390)	DHTKD1 (ENSCHIG00000012430) #22	ENSCHIG00000011020	SEC61A2 (ENSCHIG00000015372)	NUDT5 (ENSCHIG00000014304)	CDC123 (ENSCHIG00000021825)	CAMK1D (ENSCHIG00000007318) #23	ENSCHIG00000017494	CCDC3 (ENSCHIG00000009477)	ENSCHIG00000022895	YME1L1 (ENSCHIG00000026882)	MASTL (ENSCHIG00000011834)	ACBD5 (ENSCHIG00000023769)	ABI1 (ENSCHIG00000015241)	ENSCHIG00000004703	PDSS1 (ENSCHIG00000021352)	ENSCHIG00000024157
Rambouillet Sheep	MODERN SPECIES	4	PRKCQ (ENSOARG00020003986)	SFMBT2 (ENSOARG00020004270)	ENSOARG00020004315	ITIH5 (ENSOARG00020004363)	ENSOARG00020004546	ITIH2 (ENSOARG00020004566)	KIN (ENSOARG00020004659)	ATP5F1C (ENSOARG00020004769)	TAF3 (ENSOARG00020004833) #20	GATA3 (ENSOARG00020004895)	CELF2 (ENSOARG00020005064) #21	USP6NL (ENSOARG00020005525)	ECHDC3 (ENSOARG00020005746)	ENSOARG00020005780	UPF2 (ENSOARG00020005801)	DHTKD1 (ENSOARG00020005895) #22	SEC61A2 (ENSOARG00020006097)	NUDT5 (ENSOARG00020007141)	CDC123 (ENSOARG00020007274)	CAMK1D (ENSOARG00020007391) #23	PRR13 (ENSOARG00020007540)	CCDC3 (ENSOARG00020007549)	ENSOARG00020007584	ENSOARG00020007621	ENSOARG00020007712	ENSOARG00020008696	YME1L1 (ENSOARG00020008735)	MASTL (ENSOARG00020008948)	ENSOARG00020009111	ABI1 (ENSOARG00020009594)	PDSS1 (ENSOARG00020010480)
Bovinae	ANCESTRAL SPECIES	52	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000153783.b.b.c.a.a.b	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b.i.b	ENSGT00940000153661.b.b	ENSGT00940000153661.a.a.c.b.a.a.b
Bos	ANCESTRAL SPECIES	22	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000153783.b.b.c.b.a.b	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT01100000263506.a.e.a.a.a.a.a.d.b	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b.i.b	ENSGT00940000153661.b.b	ENSGT00940000153661.a.a.c.b.a.a.b
Bos_b	ANCESTRAL SPECIES	4	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000153783.b.b.c.b.a.b	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT01100000263506.a.e.a.a.a.a.a.d.b	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b.i.b	ENSGT00940000153661.b.b	ENSGT00940000161392.c	ENSGT00940000158153	ENSGT00940000160214	ENSGT00390000001116	ENSGT00940000161088	ENSGT00390000017998	ENSGT00940000156786.k	ENSGT00940000156429	ENSGT00950000182885.A.b
Cow	MODERN SPECIES	4	PRKCQ (ENSBTAG00000010664)	SFMBT2 (ENSBTAG00000005915)	ITIH5 (ENSBTAG00000013004)	ENSBTAG00000051759	ITIH2 (ENSBTAG00000014075)	KIN (ENSBTAG00000013925)	ATP5F1C (ENSBTAG00000013930)	TAF3 (ENSBTAG00000002836) #20	GATA3 (ENSBTAG00000017243)	ENSBTAG00000048047	CELF2 (ENSBTAG00000008937) #21	USP6NL (ENSBTAG00000019488)	ECHDC3 (ENSBTAG00000012377)	PROSER2 (ENSBTAG00000039571)	UPF2 (ENSBTAG00000000288)	DHTKD1 (ENSBTAG00000000291) #22	SEC61A2 (ENSBTAG00000019508)	NUDT5 (ENSBTAG00000019509)	CDC123 (ENSBTAG00000019511)	ENSBTAG00000050894	CAMK1D (ENSBTAG00000008650) #23	CCDC3 (ENSBTAG00000040490)	ENSBTAG00000054579	ENSBTAG00000040222	ENSBTAG00000051963	ENSBTAG00000022931	ENSBTAG00000049042	ENSBTAG00000036222	ENSBTAG00000017012	ENSBTAG00000023169	NANP (ENSBTAG00000000686)
Hybrid Bos Indicus	MODERN SPECIES	4	ITIH2 (ENSBIXG00005014128)	KIN (ENSBIXG00005013964)	ENSBIXG00005001746	ATP5F1C (ENSBIXG00005013916)	TAF3 (ENSBIXG00005001734) #20	GATA3 (ENSBIXG00005013843)	ENSBIXG00005013758	ENSBIXG00005001685	CELF2 (ENSBIXG00005013685) #21	ENSBIXG00005013511	ENSBIXG00005005842	USP6NL (ENSBIXG00005013444)	ECHDC3 (ENSBIXG00005006803)	ENSBIXG00005013308	UPF2 (ENSBIXG00005013273)	DHTKD1 (ENSBIXG00005013152) #22	SEC61A2 (ENSBIXG00005013072)	NUDT5 (ENSBIXG00005012981)	CDC123 (ENSBIXG00005001450)	CAMK1D (ENSBIXG00005012797) #23	ENSBIXG00005012757	ENSBIXG00005000298	ENSBIXG00005012648	ENSBIXG00005012627	ENSBIXG00005006795	ENSBIXG00005000328	NANP (ENSBIXG00005012466)	ENSBIXG00005012425	OTOR (ENSBIXG00005000268)	ENSBIXG00005000358	ENSBIXG00005012361
Bos_a	ANCESTRAL SPECIES	67	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000153783.b.b.c.b.a.b	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT01100000263506.a.e.a.a.a.a.a.d.b	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23
Wild yak	MODERN SPECIES	1063															UPF2 (ENSBMUG00000013795)	DHTKD1 (ENSBMUG00000013758) #22	SEC61A2 (ENSBMUG00000013702)	NUDT5 (ENSBMUG00000013601)	CDC123 (ENSBMUG00000013537)	CAMK1D (ENSBMUG00000013448) #23
Domestic yak	MODERN SPECIES	3	ENSBGRG00000015683	ITIH2 (ENSBGRG00000015293)	KIN (ENSBGRG00000015012)	ENSBGRG00000014986	TAF3 (ENSBGRG00000014569) #20	GATA3 (ENSBGRG00000014433)	ENSBGRG00000014404	ENSBGRG00000014338	ENSBGRG00000014292	CELF2 (ENSBGRG00000013350) #21	ENSBGRG00000013306	USP6NL (ENSBGRG00000012795)	ECHDC3 (ENSBGRG00000012636)	PROSER2 (ENSBGRG00000012599)	UPF2 (ENSBGRG00000012518)	DHTKD1 (ENSBGRG00000012293) #22	SEC61A2 (ENSBGRG00000011982)	NUDT5 (ENSBGRG00000011691)	CDC123 (ENSBGRG00000011220)	CAMK1D (ENSBGRG00000010957) #23	ENSBGRG00000010854
American bison	MODERN SPECIES	3251											CELF2 (ENSBBBG00000017921) #21	USP6NL (ENSBBBG00000004415)	ECHDC3 (ENSBBBG00000017964)	PROSER2 (ENSBBBG00000017975)	UPF2 (ENSBBBG00000018030)	DHTKD1 (ENSBBBG00000004439) #22	SEC61A2 (ENSBBBG00000018161)	NUDT5 (ENSBBBG00000018238)	CDC123 (ENSBBBG00000018300)	CAMK1D (ENSBBBG00000018318) #23	CCDC3 (ENSBBBG00000018324)
Siberian musk deer	MODERN SPECIES	1196											ENSMMSG00000015366 #21	USP6NL (ENSMMSG00000015139)	ECHDC3 (ENSMMSG00000015093)	PROSER2 (ENSMMSG00000015086)	UPF2 (ENSMMSG00000014985)	DHTKD1 (ENSMMSG00000014936) #22	SEC61A2 (ENSMMSG00000014875)	NUDT5 (ENSMMSG00000014844)	ENSMMSG00000014832	CDC123 (ENSMMSG00000014751)	CAMK1D (ENSMMSG00000014701) #23	CCDC3 (ENSMMSG00000014681)	ENSMMSG00000014604	ENSMMSG00000014525	ENSMMSG00000014498	YME1L1 (ENSMMSG00000014422)	MASTL (ENSMMSG00000014370)	ACBD5 (ENSMMSG00000014160)	ABI1 (ENSMMSG00000013821)	ENSMMSG00000013744	ENSMMSG00000013601
Yarkand deer	MODERN SPECIES	15	SFMBT2 (ENSCHYG00000020910)	ITIH5 (ENSCHYG00000021087)	ITIH2 (ENSCHYG00000021401)	KIN (ENSCHYG00000021683)	ATP5F1C (ENSCHYG00000021762)	TAF3 (ENSCHYG00000022099) #20	GATA3 (ENSCHYG00000022180)	ENSCHYG00000022308	CELF2 (ENSCHYG00000022470) #21	ENSCHYG00000023787	USP6NL (ENSCHYG00000023816)	ENSCHYG00000023939	ECHDC3 (ENSCHYG00000023970)	ENSCHYG00000024003	UPF2 (ENSCHYG00000024075)	DHTKD1 (ENSCHYG00000024382) #22	NUDT5 (ENSCHYG00000024455)	SEC61A2 (ENSCHYG00000024563)	CDC123 (ENSCHYG00000024668)	CAMK1D (ENSCHYG00000024819) #23	ENSCHYG00000025004	CCDC3 (ENSCHYG00000025017)	ENSCHYG00000025051	ENSCHYG00000025114	ENSCHYG00000025577	YME1L1 (ENSCHYG00000025596)	MASTL (ENSCHYG00000025649)	ACBD5 (ENSCHYG00000025711)	ABI1 (ENSCHYG00000025839)	PDSS1 (ENSCHYG00000026000)	APBB1IP (ENSCHYG00000026026)
Camelidae	ANCESTRAL SPECIES	123															ENSGT00530000064318.c	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b
Alpaca	MODERN SPECIES	1127															UPF2 (ENSVPAG00000006763)	DHTKD1 (ENSVPAG00000006766) #22	SEC61A2 (ENSVPAG00000006768)	NUDT5 (ENSVPAG00000006772)	CDC123 (ENSVPAG00000006774)
Arabian camel	MODERN SPECIES	28	ENSCDRG00005017154	ENSCDRG00005017365	ENSCDRG00005017403	ENSCDRG00005017412	KLF6 (ENSCDRG00005017438)	PITRM1 (ENSCDRG00005017577)	PFKP (ENSCDRG00005018368)	ADARB2 (ENSCDRG00005018874)	WDR37 (ENSCDRG00005018940)	IDI1 (ENSCDRG00005018970)	GTPBP4 (ENSCDRG00005018993)	LARP4B (ENSCDRG00005019054)	ENSCDRG00005019079	ENSCDRG00005019100	ENSCDRG00005019117	DHTKD1 (ENSCDRG00005019133) #22	ENSCDRG00005019199	SEC61A2 (ENSCDRG00005019214)	NUDT5 (ENSCDRG00005019266)	CDC123 (ENSCDRG00005019291)	CAMK1D (ENSCDRG00005019403) #23	ENSCDRG00005019432	ZMYND11 (ENSCDRG00005019468)	DIP2C (ENSCDRG00005019677)	KIF5B (ENSCDRG00005019986)	ARHGAP12 (ENSCDRG00005021840)	ZEB1 (ENSCDRG00005009025)	ZNF438 (ENSCDRG00005009205)	ENSCDRG00005009267	SVIL (ENSCDRG00005009382)	JCAD (ENSCDRG00005010696)
Eulipotyphla	ANCESTRAL SPECIES	1444															ENSGT00530000064318	ENSGT00950000183125.a #22
Common shrew	MODERN SPECIES	5778															UPF2 (ENSSARG00000008615)	ENSSARG00000008644 #22
Atlantogenata	ANCESTRAL SPECIES	5	ENSGT00790000123099	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00940000162606	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Afrotheria	ANCESTRAL SPECIES	11	ENSGT00390000000121	ENSGT00390000018872	ENSGT00790000123099	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b	ENSGT00940000163231
Tenrec	MODERN SPECIES	7228																DHTKD1 (ENSETEG00000013063) #22	SEC61A2 (ENSETEG00000013069)
Afrotheria_a	ANCESTRAL SPECIES	11	ENSGT00390000000121	ENSGT00390000018872	ENSGT00790000123099	ENSGT00950000182835.d.b	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00390000007134	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00940000163804	ENSGT00390000015073	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b	ENSGT00940000163231
Elephant	MODERN SPECIES	108	PFKFB3 (ENSLAFG00000010610)	PRKCQ (ENSLAFG00000001626)	ENSLAFG00000005244	ENSLAFG00000027399	ITIH2 (ENSLAFG00000014439)	KIN (ENSLAFG00000014449)	ATP5F1C (ENSLAFG00000014457)	TAF3 (ENSLAFG00000001915) #20	GATA3 (ENSLAFG00000002707)	UBE2L5 (ENSLAFG00000028639)	CELF2 (ENSLAFG00000013612) #21	USP6NL (ENSLAFG00000017218)	ECHDC3 (ENSLAFG00000000534)	PROSER2 (ENSLAFG00000029537)	ENSLAFG00000016345	DHTKD1 (ENSLAFG00000012038) #22	SEC61A2 (ENSLAFG00000012047)	NUDT5 (ENSLAFG00000012052)	CDC123 (ENSLAFG00000000152)	CAMK1D (ENSLAFG00000000154) #23	CCDC3 (ENSLAFG00000001794)	OPTN (ENSLAFG00000013308)	MCM10 (ENSLAFG00000004698)	PHYH (ENSLAFG00000004706)	SEPHS1 (ENSLAFG00000004670)	BEND7 (ENSLAFG00000013563)	PRPF18 (ENSLAFG00000007753)	FRMD4A (ENSLAFG00000004552)	ENSLAFG00000006404	CDNF (ENSLAFG00000006406)	MSANTD7 (ENSLAFG00000029967)
Hyrax	MODERN SPECIES	6081																ENSPCAG00000007703 #22
Xenarthra	ANCESTRAL SPECIES	520											ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00390000003721.d.b	ENSGT00940000154045.a	ENSGT00390000003057
Armadillo	MODERN SPECIES	2573										CELF2 (ENSDNOG00000000252) #21	USP6NL (ENSDNOG00000000138)	ECHDC3 (ENSDNOG00000004043)	PROSER2 (ENSDNOG00000034578)	ENSDNOG00000032450	UPF2 (ENSDNOG00000018160)	DHTKD1 (ENSDNOG00000017448) #22	ENSDNOG00000048454	NUDT5 (ENSDNOG00000010984)	CDC123 (ENSDNOG00000018069)
Sloth	MODERN SPECIES	6514																ENSCHOG00000011814 #22
Platypus	MODERN SPECIES	4	PRKCQ (ENSOANG00000015452)	SFMBT2 (ENSOANG00000015449)	ENSOANG00000015448	ITIH5 (ENSOANG00000015447)	ITIH2 (ENSOANG00000015446)	ATP5F1C (ENSOANG00000015444)	KIN (ENSOANG00000015445)	TAF3 (ENSOANG00000015443) #20	GATA3 (ENSOANG00000046997)	CELF2 (ENSOANG00000015432) #21	ENSOANG00000049115	USP6NL (ENSOANG00000037556)	ECHDC3 (ENSOANG00000038579)	ENSOANG00000049284	UPF2 (ENSOANG00000019744)	DHTKD1 (ENSOANG00000015423) #22	SEC61A2 (ENSOANG00000015422)	NUDT5 (ENSOANG00000015421)	CDC123 (ENSOANG00000015419)	CAMK1D (ENSOANG00000043737) #23	CCDC3 (ENSOANG00000041744)	OPTN (ENSOANG00000015410)	UCMA (ENSOANG00000015409) #24	PHYH (ENSOANG00000015408)	SEPHS1 (ENSOANG00000015403)	ENSOANG00000048713	BEND7 (ENSOANG00000015406)	PRPF18 (ENSOANG00000015404)	ENSOANG00000015401	FAM107B (ENSOANG00000048760)	ENSOANG00000015397
Anura	ANCESTRAL SPECIES	5	ENSGT00940000157638	ENSGT00940000158123	ENSGT00940000153920.a.a	ENSGT00940000158317	ENSGT00940000157945	ENSGT00390000005903	ENSGT00390000006837	ENSGT00710000106806 #20	ENSGT00940000159247	ENSGT00940000155461.E #21	ENSGT00940000156715	ENSGT00940000157926	ENSGT01100000263521.a.a.b.a.b.a.a.b.b.b	ENSGT00940000154315.b	ENSGT00530000064318	ENSGT00950000183125.a #22	ENSGT00940000154045.a	ENSGT00390000003057	ENSGT00940000156776 #23	ENSGT00390000014429.b	ENSGT00530000063808.b	ENSGT00940000161474.b	ENSGT00390000007134	ENSGT00390000011492 #24	ENSGT00390000001775.B	ENSGT00390000000950.c.b	ENSGT00390000015073	ENSGT00940000163804	ENSGT01020000230354.A.b	ENSGT00390000011228.b.b	ENSGT00390000007160.a.b
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000011208	ENSLLEG00000011222	ENSLLEG00000011243	CELF2 (ENSLLEG00000011510) #21	ENSLLEG00000013607	ENSLLEG00000013640	ENSLLEG00000013654	ENSLLEG00000013668	USP6NL (ENSLLEG00000013701)	ENSLLEG00000013879	ENSLLEG00000013908	ECHDC3 (ENSLLEG00000013935)	ENSLLEG00000013988	PROSER2 (ENSLLEG00000014154)	UPF2 (ENSLLEG00000014348)	DHTKD1 (ENSLLEG00000015022) #22	NUDT5 (ENSLLEG00000015330)	CDC123 (ENSLLEG00000015509)	ENSLLEG00000015652	CAMK1D (ENSLLEG00000015698) #23	ENSLLEG00000015961	CCDC3 (ENSLLEG00000015983)	OPTN (ENSLLEG00000016015)	ENSLLEG00000016124	MCM10 (ENSLLEG00000016225)	UCMA (ENSLLEG00000016441) #24	ENSLLEG00000016513	ENSLLEG00000016731	ENSLLEG00000016798	SEPHS1 (ENSLLEG00000016818)	ENSLLEG00000017043
Frog	MODERN SPECIES	3	sfmbt2 (ENSXETG00000001863)	ENSXETG00000046153	tmem110l (ENSXETG00000025403)	itih5 (ENSXETG00000001865)	itih2 (ENSXETG00000001866)	kin (ENSXETG00000031771)	ehmt1 (ENSXETG00000001868)	taf3 (ENSXETG00000001869) #20	gata3 (ENSXETG00000025398)	celf2 (ENSXETG00000021992) #21	usp6nl (ENSXETG00000030976)	echdc3 (ENSXETG00000035980)	proser2 (ENSXETG00000030433)	ENSXETG00000042059	upf2 (ENSXETG00000033103)	dhtkd1 (ENSXETG00000021954) #22	nudt5 (ENSXETG00000021953)	ENSXETG00000036689	camk1d (ENSXETG00000009109) #23	ccdc3 (ENSXETG00000027466)	optn (ENSXETG00000009111)	ENSXETG00000039420	hspa14 (ENSXETG00000009112)	mcm10 (ENSXETG00000009113)	ucma (ENSXETG00000009114) #24	phyh (ENSXETG00000009115)	sephs1 (ENSXETG00000009116)	bend7 (ENSXETG00000009117)	frmd4a (ENSXETG00000009118)	fam107b (ENSXETG00000009120)	cdnf (ENSXETG00000036790)
Coelacanth	MODERN SPECIES	405								ENSLACG00000008474	CELF2 (ENSLACG00000009779) #21	USP6NL (ENSLACG00000013950)	ECHDC3 (ENSLACG00000015382)	PROSER2 (ENSLACG00000015712)	steep1 (ENSLACG00000015866)	UPF2 (ENSLACG00000015945)	ENSLACG00000016039	DHTKD1 (ENSLACG00000016483) #22	SEC61A2 (ENSLACG00000016677)	CDC123 (ENSLACG00000016823)
Elephant shark	MODERN SPECIES	1676	ENSCMIG00000012909	TAF3 (ENSCMIG00000012907) #20	atp5f1c (ENSCMIG00000012903)	kin (ENSCMIG00000012896)	itih2 (ENSCMIG00000012695)	ENSCMIG00000012609	ENSCMIG00000012608	STIMATE (ENSCMIG00000012600)	SFMBT2 (ENSCMIG00000012563)	prkcq (ENSCMIG00000012526)	pfkfb3 (ENSCMIG00000012459)	rbm17 (ENSCMIG00000012400)	ECHDC3 (ENSCMIG00000012393)	ENSCMIG00000012389	UPF2 (ENSCMIG00000012317)	dhtkd1 (ENSCMIG00000012142) #22	SEC61A2 (ENSCMIG00000012024)	ENSCMIG00000011999	cdc123 (ENSCMIG00000011994)	camk1da (ENSCMIG00000011985) #23	ccdc3a (ENSCMIG00000011974)	ENSCMIG00000011972	mcm10 (ENSCMIG00000011967)