Mus	ANCESTRAL SPECIES	3	ENSGT01060000248564.b.a.a.a #7	ENSGT00950000182962.b.a #8	ENSGT00390000018883 #9	ENSGT00940000157554 #10	ENSGT00940000160073 #11	ENSGT01000000214440.A.a.b.a #12	ENSGT00940000156115 #13	ENSGT00530000063770.c.a #14	ENSGT00390000010045 #15	ENSGT00950000183182.a.a #16	ENSGT01090000260093.b #17	ENSGT00950000182978.B #18	ENSGT01060000248589.D #19	ENSGT00390000012569.a #20	ENSGT00390000006264 #21	ENSGT00950000183168.B.a #22	ENSGT00390000003312 #23	ENSGT00940000157582 #24	ENSGT00940000155543 #25	ENSGT00940000156139 #26	ENSGT00940000162094 #27	ENSGT00390000002144 #28	ENSGT00410000025596.a.b #29	ENSGT00940000156761 #30	ENSGT00940000157669 #31	ENSGT00860000135912	ENSGT00940000157833 #33	ENSGT00530000063698.b #34	ENSGT00940000156213 #35	ENSGT00940000156592 #36	ENSGT00940000157151 #37
Shrew mouse	MODERN SPECIES	19	Gpr3 (MGP_PahariEiJ_G0028915) #7	Wasf2 (MGP_PahariEiJ_G0028914) #8	Ahdc1 (MGP_PahariEiJ_G0028913) #9	Fgr (MGP_PahariEiJ_G0028912) #10	Fam76a (MGP_PahariEiJ_G0028911) #11	MGP_PahariEiJ_G0028910 #12	Ppp1r8 (MGP_PahariEiJ_G0028909) #13	Themis2 (MGP_PahariEiJ_G0028908) #14	Rpa2 (MGP_PahariEiJ_G0028907) #15	Smpdl3b (MGP_PahariEiJ_G0028906) #16	Xkr8 (MGP_PahariEiJ_G0028905) #17	Eya3 (MGP_PahariEiJ_G0028904) #18	Ptafr (MGP_PahariEiJ_G0028903) #19	MGP_PahariEiJ_G0028902 #20	Atpif1 (MGP_PahariEiJ_G0028901) #21	Sesn2 (MGP_PahariEiJ_G0028900) #22	Med18 (MGP_PahariEiJ_G0028899) #23	Phactr4 (MGP_PahariEiJ_G0028898) #24	Rcc1 (MGP_PahariEiJ_G0028897) #25	Trnau1ap (MGP_PahariEiJ_G0028896) #26	Rab42 (MGP_PahariEiJ_G0028895) #27	Taf12 (MGP_PahariEiJ_G0028894) #28	Gmeb1 (MGP_PahariEiJ_G0028893) #29	Ythdf2 (MGP_PahariEiJ_G0028892) #30	Oprd1 (MGP_PahariEiJ_G0028891) #31	MGP_PahariEiJ_G0028890 #32	Epb41 (MGP_PahariEiJ_G0028889) #33	Tmem200b (MGP_PahariEiJ_G0028888) #34	Srsf4 (MGP_PahariEiJ_G0028887) #35	Mecr (MGP_PahariEiJ_G0028886) #36	Ptpru (MGP_PahariEiJ_G0028885) #37
Mus_A	ANCESTRAL SPECIES	3	ENSGT01060000248564.b.a.a.a #7	ENSGT00950000182962.b.a #8	ENSGT00390000018883 #9	ENSGT00940000157554 #10	ENSGT00940000160073 #11	ENSGT01000000214440.A.a.b.a #12	ENSGT00940000156115 #13	ENSGT00530000063770.c.a #14	ENSGT00390000010045 #15	ENSGT00950000183182.a.a #16	ENSGT01090000260093.b #17	ENSGT00950000182978.B #18	ENSGT01060000248589.D #19	ENSGT00390000012569.a #20	ENSGT00390000006264 #21	ENSGT00950000183168.B.a #22	ENSGT00390000003312 #23	ENSGT00940000157582 #24	ENSGT00940000155543 #25	ENSGT00940000156139 #26	ENSGT00940000162094 #27	ENSGT00390000002144 #28	ENSGT00410000025596.a.b #29	ENSGT00940000156761 #30	ENSGT00940000157669 #31	ENSGT00860000135912	ENSGT00940000157833 #33	ENSGT00530000063698.b #34	ENSGT00940000156213 #35	ENSGT00940000156592 #36	ENSGT00940000157151 #37
Mus_B	ANCESTRAL SPECIES	5	ENSGT01060000248564.b.a.a.a #7	ENSGT00950000182962.b.a #8	ENSGT00390000018883 #9	ENSGT00940000157554 #10	ENSGT00940000160073 #11	ENSGT01000000214440.A.a.b.a #12	ENSGT00940000156115 #13	ENSGT00530000063770.c.a #14	ENSGT00390000010045 #15	ENSGT00950000183182.a.a #16	ENSGT01090000260093.b #17	ENSGT00950000182978.B #18	ENSGT01060000248589.D #19	ENSGT00390000012569.a #20	ENSGT00390000006264 #21	ENSGT00950000183168.B.a #22	ENSGT00390000003312 #23	ENSGT00940000157582 #24	ENSGT00940000155543 #25	ENSGT00940000156139 #26	ENSGT00940000162094 #27	ENSGT00390000002144 #28	ENSGT00410000025596.a.b #29	ENSGT00940000156761 #30	ENSGT00940000157669 #31	ENSGT00860000135912	ENSGT00940000157833 #33	ENSGT00530000063698.b #34	ENSGT00940000156213 #35	ENSGT00940000156592 #36	ENSGT00940000157151 #37
Mus_C	ANCESTRAL SPECIES	2	ENSGT01060000248564.b.a.a.a #7	ENSGT00950000182962.b.a #8	ENSGT00390000018883 #9	ENSGT00940000157554 #10	ENSGT00940000160073.g #11	ENSGT01000000214440.A.a.b.a #12	ENSGT00940000156115 #13	ENSGT00530000063770.c.a #14	ENSGT00390000010045 #15	ENSGT00950000183182.a.a #16	ENSGT01090000260093.b #17	ENSGT00950000182978.B #18	ENSGT01060000248589.D #19	ENSGT00390000012569.a #20	ENSGT00390000006264 #21	ENSGT00950000183168.B.a #22	ENSGT00390000003312 #23	ENSGT00940000157582 #24	ENSGT00940000155543 #25	ENSGT00940000156139 #26	ENSGT00940000162094 #27	ENSGT00390000002144 #28	ENSGT00410000025596.a.b #29	ENSGT00940000156761 #30	ENSGT00940000157669 #31	ENSGT00860000135912	ENSGT00940000157833 #33	ENSGT00530000063698.b #34	ENSGT00940000156213 #35	ENSGT00940000156592 #36	ENSGT00940000157151 #37
Steppe mouse	MODERN SPECIES	2797							Themis2 (ENSMSIG00000008497) #14	Rpa2 (ENSMSIG00000008505) #15	Smpdl3b (ENSMSIG00000008523) #16	Eya3 (ENSMSIG00000008546) #18	Xkr8 (ENSMSIG00000008821) #17	Ptafr (ENSMSIG00000008840) #19	Dnajc8 (ENSMSIG00000008847) #20	ENSMSIG00000009011	Atpif1 (ENSMSIG00000009020) #21	Sesn2 (ENSMSIG00000009040) #22	Med18 (ENSMSIG00000009082) #23	Phactr4 (ENSMSIG00000009106) #24	Rcc1 (ENSMSIG00000009244) #25	ENSMSIG00000009341 #26	Rab42 (ENSMSIG00000009484) #27	Taf12 (ENSMSIG00000009505) #28	Gmeb1 (ENSMSIG00000009569) #29	ENSMSIG00000009595	ENSMSIG00000009602 #30	Oprd1 (ENSMSIG00000009620) #31	Epb41 (ENSMSIG00000009639) #33	ENSMSIG00000012064	Tmem200b (ENSMSIG00000012073) #34
spretus	MODERN SPECIES	13	Gpr3 (MGP_SPRETEiJ_G0027563) #7	Wasf2 (MGP_SPRETEiJ_G0027562) #8	Ahdc1 (MGP_SPRETEiJ_G0027561) #9	Fgr (MGP_SPRETEiJ_G0027560) #10	Fam76a (MGP_SPRETEiJ_G0027559) #11	Stx12 (MGP_SPRETEiJ_G0027558) #12	Ppp1r8 (MGP_SPRETEiJ_G0027557) #13	Themis2 (MGP_SPRETEiJ_G0027556) #14	Rpa2 (MGP_SPRETEiJ_G0027555) #15	Smpdl3b (MGP_SPRETEiJ_G0027554) #16	Xkr8 (MGP_SPRETEiJ_G0027553) #17	Eya3 (MGP_SPRETEiJ_G0027552) #18	Ptafr (MGP_SPRETEiJ_G0027551) #19	Dnajc8 (MGP_SPRETEiJ_G0027550) #20	Atpif1 (MGP_SPRETEiJ_G0027549) #21	Sesn2 (MGP_SPRETEiJ_G0027548) #22	Med18 (MGP_SPRETEiJ_G0027547) #23	Phactr4 (MGP_SPRETEiJ_G0027546) #24	Rcc1 (MGP_SPRETEiJ_G0027545) #25	Trnau1ap (MGP_SPRETEiJ_G0027544) #26	Rab42 (MGP_SPRETEiJ_G0027543) #27	Taf12 (MGP_SPRETEiJ_G0027542) #28	Gmeb1 (MGP_SPRETEiJ_G0027541) #29	MGP_SPRETEiJ_G0027540 #30	Oprd1 (MGP_SPRETEiJ_G0027539) #31	MGP_SPRETEiJ_G0027538	Epb41 (MGP_SPRETEiJ_G0027537) #33	Tmem200b (MGP_SPRETEiJ_G0027536) #34	Srsf4 (MGP_SPRETEiJ_G0027535) #35	MGP_SPRETEiJ_G0027534 #36	Ptpru (MGP_SPRETEiJ_G0027533) #37
Mouse	MODERN SPECIES	13	Gpr3 (ENSMUSG00000049649) #7	Wasf2 (ENSMUSG00000028868) #8	Ahdc1 (ENSMUSG00000037692) #9	Fgr (ENSMUSG00000028874) #10	Fam76a (ENSMUSG00000028878) #11	Stx12 (ENSMUSG00000028879) #12	Ppp1r8 (ENSMUSG00000028882) #13	Themis2 (ENSMUSG00000037731) #14	Rpa2 (ENSMUSG00000028884) #15	Smpdl3b (ENSMUSG00000028885) #16	Xkr8 (ENSMUSG00000037752) #17	Eya3 (ENSMUSG00000028886) #18	Ptafr (ENSMUSG00000056529) #19	Dnajc8 (ENSMUSG00000054405) #20	Atpif1 (ENSMUSG00000054428) #21	Sesn2 (ENSMUSG00000028893) #22	Med18 (ENSMUSG00000066042) #23	Phactr4 (ENSMUSG00000066043) #24	Rcc1 (ENSMUSG00000028896) #25	Trnau1ap (ENSMUSG00000028898) #26	Rab42 (ENSMUSG00000089687) #27	Taf12 (ENSMUSG00000028899) #28	Gmeb1 (ENSMUSG00000028901) #29	Ythdf2 (ENSMUSG00000040025) #30	Oprd1 (ENSMUSG00000050511) #31	Epb41 (ENSMUSG00000028906) #33	Tmem200b (ENSMUSG00000070720) #34	Srsf4 (ENSMUSG00000028911) #35	Mecr (ENSMUSG00000028910) #36	Ptpru (ENSMUSG00000028909) #37	Matn1 (ENSMUSG00000040533)
Ryukyu mouse	MODERN SPECIES	13	Gpr3 (MGP_CAROLIEiJ_G0026582) #7	Wasf2 (MGP_CAROLIEiJ_G0026581) #8	Ahdc1 (MGP_CAROLIEiJ_G0026580) #9	Fgr (MGP_CAROLIEiJ_G0026579) #10	Fam76a (MGP_CAROLIEiJ_G0026578) #11	Stx12 (MGP_CAROLIEiJ_G0026577) #12	Ppp1r8 (MGP_CAROLIEiJ_G0026576) #13	Themis2 (MGP_CAROLIEiJ_G0026575) #14	Rpa2 (MGP_CAROLIEiJ_G0026574) #15	Smpdl3b (MGP_CAROLIEiJ_G0026573) #16	Xkr8 (MGP_CAROLIEiJ_G0026572) #17	Eya3 (MGP_CAROLIEiJ_G0026571) #18	Ptafr (MGP_CAROLIEiJ_G0026570) #19	MGP_CAROLIEiJ_G0026569 #20	Atpif1 (MGP_CAROLIEiJ_G0026568) #21	Sesn2 (MGP_CAROLIEiJ_G0026567) #22	Med18 (MGP_CAROLIEiJ_G0026566) #23	Phactr4 (MGP_CAROLIEiJ_G0026565) #24	Rcc1 (MGP_CAROLIEiJ_G0026564) #25	Trnau1ap (MGP_CAROLIEiJ_G0026563) #26	Gmeb1 (MGP_CAROLIEiJ_G0026561) #29	Oprd1 (MGP_CAROLIEiJ_G0026559) #31	MGP_CAROLIEiJ_G0026558	Epb41 (MGP_CAROLIEiJ_G0026557) #33	Tmem200b (MGP_CAROLIEiJ_G0026556) #34	Srsf4 (MGP_CAROLIEiJ_G0026555) #35	Mecr (MGP_CAROLIEiJ_G0026554) #36	Ptpru (MGP_CAROLIEiJ_G0026553) #37	Matn1 (MGP_CAROLIEiJ_G0026552)	Laptm5 (MGP_CAROLIEiJ_G0026551)	Sdc3 (MGP_CAROLIEiJ_G0026550)