Fungi/Metazoa group ANCESTRAL SPECIES ENSGT00950000183091.A #22 Bilateria DUPLICATION Bilateria ANCESTRAL SPECIES ENSGT00950000183091.A.a #22 Chordata ANCESTRAL SPECIES ENSGT00950000183091.A.a #22 Vertebrata ANCESTRAL SPECIES ENSGT00950000183091.A.a #22 Gnathostomata ANCESTRAL SPECIES 10 ENSGT00940000155996 ENSGT00390000017265 ENSGT00940000156602 ENSGT00390000004068 ENSGT00940000155447 ENSGT00500000044926 ENSGT00390000011476 ENSGT00940000169682 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.A.b.a ##13 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00530000063474.A ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00940000175884 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 Euteleostomi ANCESTRAL SPECIES 4 ENSGT00390000004068 ENSGT00940000155447 ENSGT00500000044926 ENSGT00390000011476 ENSGT00940000169682 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00940000163882 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00530000063474.A ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d Sarcopterygii ANCESTRAL SPECIES 13 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00950000183145.B.a.a ##13 ENSGT00950000183145.B.a.b ##13 ENSGT00940000162108 ENSGT00950000183145.A.b.a ##13 ENSGT00940000164475 ENSGT00940000163882 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00530000063474.A ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d Tetrapoda ANCESTRAL SPECIES 17 ENSGT00500000044926 ENSGT00390000011476 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00950000183145.B.a.a ##13 ENSGT00950000183145.B.a.b ##13 ENSGT00940000162108 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Amniota ANCESTRAL SPECIES 10 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.A.b.a ##13 ENSGT00940000164475 ENSGT00950000183145.D ##13 ENSGT00950000183145.E #13 ENSGT00940000163882 ENSGT00940000154525.b.a #14 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Mammalia ANCESTRAL SPECIES 14 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.A.b.a ##13 ENSGT00950000183145.D ##13 ENSGT00950000183145.E #13 ENSGT00940000163882 ENSGT00940000154525.b.a #14 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Theria ANCESTRAL SPECIES 26 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.C ##13 ENSGT00950000183145.D ##13 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108 ENSGT00940000154525.b.a #14 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Eutheria ANCESTRAL SPECIES 13 ENSGT00950000183145.C ##13 ENSGT00950000183145.D ##13 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108 ENSGT00940000165716 ENSGT00940000154525.b.a #14 ENSGT00940000163005 ENSGT00390000017384 #16 ENSGT00940000164044 #15 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Boreoeutheria ANCESTRAL SPECIES 16 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT01010000224541 ENSGT00940000162108.tb ENSGT00940000162108.sb.a ENSGT00940000162108.sb.b ENSGT00940000165716 ENSGT00940000154525.b.a #14 ENSGT00940000163005 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Euarchontoglires ANCESTRAL SPECIES 16 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT01010000224541 ENSGT00940000162108.tb ENSGT00940000162108.sb.a ENSGT00940000162108.sb.b ENSGT00940000165716 ENSGT00940000154525.b.a #14 ENSGT00940000163005 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00940000168312 ENSGT00390000014797 #37 ENSGT00940000159140.d Euarchontoglires_A ANCESTRAL SPECIES 15 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000165716 ENSGT00940000154525.b.a #14 ENSGT00940000164044 #15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00940000168312 ENSGT00390000014797 #37 ENSGT00940000159140.d Glires ANCESTRAL SPECIES 16 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT01010000224541 ENSGT00940000162108.tb ENSGT00940000165716 ENSGT00940000154525.b.a #14 ENSGT00940000171163 ENSGT00940000164044 #15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00940000168312 ENSGT00390000014797 #37 ENSGT00940000159140.d Rodentia ANCESTRAL SPECIES 16 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00940000164044.a #15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Rodentia_A ANCESTRAL SPECIES 15 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00390000005511 #11 ENSGT00950000183145.E #13 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f.g.b #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Sciuridae ANCESTRAL SPECIES 21 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00390000005511 #11 ENSGT00950000183145.E #13 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f.g.b #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES ENSGT00950000183091.A.a.n #22 Marmotini_b ANCESTRAL SPECIES ENSGT00950000183091.A.a.n #22 Arctic ground squirrel MODERN SPECIES 28 BTBD16 (ENSUPAG00010004978) #7 ENSUPAG00010004971 #8 ENSUPAG00010004924 #9 HTRA1 (ENSUPAG00010004911) #10 ENSUPAG00010004901 #11 ENSUPAG00010004894 #12 ENSUPAG00010004857 #13 CUZD1 (ENSUPAG00010004852) #14 ENSUPAG00010004845 #15 ENSUPAG00010004823 #16 PSTK (ENSUPAG00010004819) #17 IKZF5 (ENSUPAG00010004809) #18 ACADSB (ENSUPAG00010004778) #19 HMX3 (ENSUPAG00010004771) #20 HMX2 (ENSUPAG00010004763) #21 BUB3 (ENSUPAG00010004752) #22 GPR26 (ENSUPAG00010004746) #23 CPXM2 (ENSUPAG00010004732) #24 CHST15 (ENSUPAG00010004726) #25 OAT (ENSUPAG00010004703) #26 NKX1-2 (ENSUPAG00010004701) #27 LHPP (ENSUPAG00010004693) #28 FAM53B (ENSUPAG00010004683) #29 ENSUPAG00010004677 #30 EEF1AKMT2 (ENSUPAG00010004656) #31 ABRAXAS2 (ENSUPAG00010004640) #32 ENSUPAG00010004631 #33 ZRANB1 (ENSUPAG00010004606) #34 CTBP2 (ENSUPAG00010004547) #35 TEX36 (ENSUPAG00010004543) #36 EDRF1 (ENSUPAG00010004494) #37 Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES 16 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157.k #9 ENSGT00940000156955 #10 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.m.a ##22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f.g.b #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Alpin marmot MODERN SPECIES 53 ENSMMMG00000001271 ENSMMMG00000001553 BTBD16 (ENSMMMG00000001579) #7 ENSMMMG00000001679 #9 ENSMMMG00000001757 #8 ENSMMMG00000001770 #10 ENSMMMG00000001790 ##13 C10orf120 (ENSMMMG00000001925) #11 ENSMMMG00000001938 ENSMMMG00000001979 CUZD1 (ENSMMMG00000001993) #14 PSTK (ENSMMMG00000002014) #17 IKZF5 (ENSMMMG00000002033) #18 ACADSB (ENSMMMG00000002052) #19 HMX2 (ENSMMMG00000002076) #21 ENSMMMG00000002090 ##22 GPR26 (ENSMMMG00000002142) #23 CPXM2 (ENSMMMG00000002158) #24 CHST15 (ENSMMMG00000002233) #25 OAT (ENSMMMG00000002258) #26 LHPP (ENSMMMG00000002272) #28 FAM53B (ENSMMMG00000002296) #29 ENSMMMG00000002319 #31 ABRAXAS2 (ENSMMMG00000002355) #32 ZRANB1 (ENSMMMG00000002368) #34 CTBP2 (ENSMMMG00000002426) #35 EDRF1 (ENSMMMG00000002477) #37 MMP21 (ENSMMMG00000002600) UROS (ENSMMMG00000002640) ENSMMMG00000002705 DHX32 (ENSMMMG00000002778) Marmotini_b ANCESTRAL SPECIES 27 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157.k #9 ENSGT00940000156955 #10 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.m.a ##22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f.g.b #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Squirrel MODERN SPECIES 86 NSMCE4A (ENSSTOG00000011112) ENSSTOG00000022252 BTBD16 (ENSSTOG00000015270) #7 ENSSTOG00000010191 #9 HTRA1 (ENSSTOG00000026475) #10 ENSSTOG00000034031 #12 ENSSTOG00000026812 CUZD1 (ENSSTOG00000008183) #14 ENSSTOG00000030864 ##15 ENSSTOG00000033040 #16 PSTK (ENSSTOG00000006955) #17 IKZF5 (ENSSTOG00000028669) #18 ACADSB (ENSSTOG00000006965) #19 HMX3 (ENSSTOG00000003981) #20 HMX2 (ENSSTOG00000000994) #21 ENSSTOG00000021785 ##22 GPR26 (ENSSTOG00000026881) #23 CPXM2 (ENSSTOG00000020281) #24 CHST15 (ENSSTOG00000020654) #25 OAT (ENSSTOG00000004524) #26 NKX1-2 (ENSSTOG00000021286) #27 LHPP (ENSSTOG00000021871) #28 FAM53B (ENSSTOG00000004536) #29 EEF1AKMT2 (ENSSTOG00000031706) #31 ENSSTOG00000031920 #30 ABRAXAS2 (ENSSTOG00000029214) #32 ZRANB1 (ENSSTOG00000014180) #34 CTBP2 (ENSSTOG00000014199) #35 TEX36 (ENSSTOG00000008384) #36 EDRF1 (ENSSTOG00000011796) #37 MMP21 (ENSSTOG00000011810) Marmotini ANCESTRAL SPECIES ENSGT00950000183091.A.a.m.b ##22 Alpin marmot MODERN SPECIES 2 ENSMMMG00000014803 ENSMMMG00000014777 ENSMMMG00000014760 SLC16A10 (ENSMMMG00000014746) RPF2 (ENSMMMG00000014732) ENSMMMG00000014718 CDK19 (ENSMMMG00000014687) SLC22A16 (ENSMMMG00000014660) DDO (ENSMMMG00000014615) METTL24 (ENSMMMG00000014600) CDC40 (ENSMMMG00000014580) ENSMMMG00000014554 GPR6 (ENSMMMG00000014540) FIG4 (ENSMMMG00000014523) ENSMMMG00000014502 ENSMMMG00000014484 ##22 ENSMMMG00000014463 ZBTB24 (ENSMMMG00000014455) MICAL1 (ENSMMMG00000014375) SMPD2 (ENSMMMG00000014360) PPIL6 (ENSMMMG00000014353) ENSMMMG00000014239 ENSMMMG00000014119 CEP57L1 (ENSMMMG00000014071) SESN1 (ENSMMMG00000014034) ARMC2 (ENSMMMG00000013988) ENSMMMG00000013982 ENSMMMG00000013964 AFG1L (ENSMMMG00000013948) ENSMMMG00000013918 NR2E1 (ENSMMMG00000013897) Marmotini_b ANCESTRAL SPECIES ENSGT00950000183091.A.a.m.b ##22 Squirrel MODERN SPECIES 164 ENSSTOG00000030235 ENSSTOG00000012726 SLC16A10 (ENSSTOG00000023508) RPF2 (ENSSTOG00000013114) GTF3C6 (ENSSTOG00000013106) ENSSTOG00000000205 CDK19 (ENSSTOG00000024165) DDO (ENSSTOG00000006021) METTL24 (ENSSTOG00000006015) CDC40 (ENSSTOG00000024426) ENSSTOG00000005949 GPR6 (ENSSTOG00000011502) FIG4 (ENSSTOG00000011494) ENSSTOG00000030456 ##22 ENSSTOG00000011481 ZBTB24 (ENSSTOG00000011460) MICAL1 (ENSSTOG00000011447) SMPD2 (ENSSTOG00000028661) PPIL6 (ENSSTOG00000011426) ENSSTOG00000011417 CEP57L1 (ENSSTOG00000019505) SESN1 (ENSSTOG00000011391) ENSSTOG00000000896 ENSSTOG00000032092 ENSSTOG00000021457 ENSSTOG00000022339 AFG1L (ENSSTOG00000001115) SNX3 (ENSSTOG00000007274) NR2E1 (ENSSTOG00000007248) Eurasian red squirrel MODERN SPECIES 13 ENSSVLG00005001346 PLEKHA1 (ENSSVLG00005001323) #9 HTRA1 (ENSSVLG00005001280) #10 ENSSVLG00005001252 #11 ENSSVLG00005001198 #13 ENSSVLG00005001120 CUZD1 (ENSSVLG00005001077) #14 ENSSVLG00005001055 #16 ENSSVLG00005001041 ENSSVLG00005001016 #16 PSTK (ENSSVLG00005000980) #17 IKZF5 (ENSSVLG00005000956) #18 ACADSB (ENSSVLG00005000924) #19 HMX3 (ENSSVLG00005000902) #20 HMX2 (ENSSVLG00005000888) #21 BUB3 (ENSSVLG00005000858) #22 ENSSVLG00005000813 GPR26 (ENSSVLG00005000793) #23 CPXM2 (ENSSVLG00005000773) #24 ENSSVLG00005000742 CHST15 (ENSSVLG00005000708) #25 ENSSVLG00005000651 #26 NKX1-2 (ENSSVLG00005000624) #27 LHPP (ENSSVLG00005000583) #28 FAM53B (ENSSVLG00005000544) #29 EEF1AKMT2 (ENSSVLG00005000510) #31 ABRAXAS2 (ENSSVLG00005000473) #32 ZRANB1 (ENSSVLG00005000426) #34 CTBP2 (ENSSVLG00005000348) #35 TEX36 (ENSSVLG00005000280) #36 EDRF1 (ENSSVLG00005000243) #37 Hystricomorpha DUPLICATION Hystricomorpha ANCESTRAL SPECIES 1 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.o #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f.g.b #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Hystricomorpha_a ANCESTRAL SPECIES 3 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035.e.a #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.o #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f.g.b #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Guinea pig MODERN SPECIES 1 FGFR2 (ENSCPOG00000008833) ATE1 (ENSCPOG00000025966) NSMCE4A (ENSCPOG00000000625) ENSCPOG00000000626 BTBD16 (ENSCPOG00000000630) #7 PLEKHA1 (ENSCPOG00000000631) #9 HTRA1 (ENSCPOG00000000632) #10 ENSCPOG00000001267 CUZD1 (ENSCPOG00000003649) #14 C10orf88 (ENSCPOG00000006675) #16 PSTK (ENSCPOG00000030265) #17 ENSCPOG00000037527 #18 ACADSB (ENSCPOG00000012372) #19 HMX3 (ENSCPOG00000011950) #20 HMX2 (ENSCPOG00000032283) #21 BUB3 (ENSCPOG00000011957) #22 GPR26 (ENSCPOG00000037735) #23 CPXM2 (ENSCPOG00000009383) #24 CHST15 (ENSCPOG00000038052) #25 OAT (ENSCPOG00000010340) #26 LHPP (ENSCPOG00000005337) #28 FAM53B (ENSCPOG00000005340) #29 EEF1AKMT2 (ENSCPOG00000005341) #31 ENSCPOG00000005342 #32 ZRANB1 (ENSCPOG00000008391) #34 CTBP2 (ENSCPOG00000008397) #35 TEX36 (ENSCPOG00000004817) #36 EDRF1 (ENSCPOG00000004826) #37 MMP21 (ENSCPOG00000004833) UROS (ENSCPOG00000004834) BCCIP (ENSCPOG00000006438) Hystricomorpha_b ANCESTRAL SPECIES 14 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035.e.a #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.o #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f.g.b #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Degu DUPLICATION Degu MODERN SPECIES 51 ENSODEG00000017758 BTBD16 (ENSODEG00000017181) #7 ENSODEG00000017646 ENSODEG00000017854 #9 HTRA1 (ENSODEG00000017523) #10 ENSODEG00000017538 #13 ENSODEG00000017508 ENSODEG00000017380 CUZD1 (ENSODEG00000017550) #14 C10orf88 (ENSODEG00000017572) #16 PSTK (ENSODEG00000017417) #17 ENSODEG00000017599 #18 ACADSB (ENSODEG00000017347) #19 HMX3 (ENSODEG00000017303) #20 HMX2 (ENSODEG00000017125) #21 ENSODEG00000017376 #22 ENSODEG00000020472 GPR26 (ENSODEG00000017488) #23 CPXM2 (ENSODEG00000017290) #24 CHST15 (ENSODEG00000017382) #25 ENSODEG00000017605 ENSODEG00000017421 #26 ENSODEG00000017371 NKX1-2 (ENSODEG00000017123) #27 LHPP (ENSODEG00000017592) #28 FAM53B (ENSODEG00000017219) #29 EEF1AKMT2 (ENSODEG00000017201) #31 ENSODEG00000020434 ENSODEG00000017504 #32 ZRANB1 (ENSODEG00000017463) #34 ENSODEG00000017299 ##35 Degu MODERN SPECIES 60 IGFBP7 (ENSODEG00000009387) POLR2B (ENSODEG00000009625) NOA1 (ENSODEG00000010143) ENSODEG00000011050 ENSODEG00000010125 ENSODEG00000009942 ENSODEG00000009707 ENSODEG00000010775 ENSODEG00000010672 HOPX (ENSODEG00000010206) ENSODEG00000010470 ENSODEG00000009952 ENSODEG00000010449 #22 SRP72 (ENSODEG00000012214) ENSODEG00000009422 PPAT (ENSODEG00000009426) AASDH (ENSODEG00000011546) ENSODEG00000010954 CEP135 (ENSODEG00000010808) EXOC1 (ENSODEG00000010280) EXOC1L (ENSODEG00000011413) NMU (ENSODEG00000010066) PDCL2 (ENSODEG00000009736) CLOCK (ENSODEG00000009397) TMEM165 (ENSODEG00000009162) SRD5A3 (ENSODEG00000009796) ENSODEG00000012100 KDR (ENSODEG00000009430) Long-tailed chinchilla MODERN SPECIES 184 NSMCE4A (ENSCLAG00000002459) TACC2 (ENSCLAG00000002687) BTBD16 (ENSCLAG00000005827) #7 PLEKHA1 (ENSCLAG00000006674) #9 HTRA1 (ENSCLAG00000002509) #10 ENSCLAG00000002836 CUZD1 (ENSCLAG00000003061) #14 ENSCLAG00000002221 ##15 ENSCLAG00000002572 C10orf88 (ENSCLAG00000002628) #16 PSTK (ENSCLAG00000002960) #17 ENSCLAG00000002888 #18 ACADSB (ENSCLAG00000003369) #19 HMX3 (ENSCLAG00000004802) #20 HMX2 (ENSCLAG00000005166) #21 BUB3 (ENSCLAG00000005834) #22 GPR26 (ENSCLAG00000001930) #23 CPXM2 (ENSCLAG00000001957) #24 CHST15 (ENSCLAG00000002182) #25 ENSCLAG00000002303 OAT (ENSCLAG00000003848) #26 NKX1-2 (ENSCLAG00000004174) #27 LHPP (ENSCLAG00000004436) #28 FAM53B (ENSCLAG00000003033) #29 EEF1AKMT2 (ENSCLAG00000003615) #31 ABRAXAS2 (ENSCLAG00000003508) #32 ZRANB1 (ENSCLAG00000003775) #34 CTBP2 (ENSCLAG00000004983) #35 TEX36 (ENSCLAG00000002643) #36 EDRF1 (ENSCLAG00000002765) #37 MMP21 (ENSCLAG00000010900) Naked mole-rat female MODERN SPECIES 4 SLF2 (ENSHGLG00000011302) ENSHGLG00000033080 PAX2 (ENSHGLG00000007584) HIF1AN (ENSHGLG00000008386) ENSHGLG00000039278 ENSHGLG00000006335 ENSHGLG00000049539 ENSHGLG00000004047 ENSHGLG00000048517 ##15 ENSHGLG00000039463 #16 ENSHGLG00000018111 #17 IKZF5 (ENSHGLG00000043894) #18 ACADSB (ENSHGLG00000016362) #19 HMX3 (ENSHGLG00000018386) #20 HMX2 (ENSHGLG00000042092) #21 BUB3 (ENSHGLG00000012641) #22 GPR26 (ENSHGLG00000032021) #23 CPXM2 (ENSHGLG00000013494) #24 CHST15 (ENSHGLG00000010199) #25 OAT (ENSHGLG00000009823) #26 NKX1-2 (ENSHGLG00000014909) #27 LHPP (ENSHGLG00000037777) #28 ENSHGLG00000036038 FAM53B (ENSHGLG00000045048) #29 EEF1AKMT2 (ENSHGLG00000036735) #31 ENSHGLG00000042876 #32 ZRANB1 (ENSHGLG00000013127) #34 ENSHGLG00000010849 ##35 TEX36 (ENSHGLG00000046213) #36 EDRF1 (ENSHGLG00000012871) #37 UROS (ENSHGLG00000016055) Hystricomorpha ANCESTRAL SPECIES ENSGT00950000183091.A.a.p #22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00950000183091.A.a.p #22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00950000183091.A.a.p #22 Degu MODERN SPECIES 158 AMOT (ENSODEG00000011962) LHFPL1 (ENSODEG00000012333) TRPC5 (ENSODEG00000015042) ENSODEG00000011583 SERTM2 (ENSODEG00000020055) DCX (ENSODEG00000012450) ENSODEG00000013976 CAPN6 (ENSODEG00000012108) PAK3 (ENSODEG00000012531) ENSODEG00000013633 CHRDL1 (ENSODEG00000011617) ENSODEG00000012689 ENSODEG00000012624 AMMECR1 (ENSODEG00000012719) TMEM164 (ENSODEG00000013344) ENSODEG00000013425 #22 ENSODEG00000012447 ENSODEG00000020116 ACSL4 (ENSODEG00000013319) NXT2 (ENSODEG00000012049) ENSODEG00000020053 GUCY2F (ENSODEG00000013232) Rodentia_B ANCESTRAL SPECIES 10 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00940000164044.a #15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Kangaroo rat MODERN SPECIES 377 Ate1 (ENSDORG00000011669) Nsmce4a (ENSDORG00000003880) ENSDORG00000003881 Btbd16 (ENSDORG00000005110) #7 Plekha1 (ENSDORG00000024017) #9 Htra1 (ENSDORG00000015731) #10 ENSDORG00000007072 Cuzd1 (ENSDORG00000007077) #14 Fam24a (ENSDORG00000010469) #15 2310057M21Rik (ENSDORG00000028211) #16 Pstk (ENSDORG00000011804) #17 Ikzf5 (ENSDORG00000030138) #18 Acadsb (ENSDORG00000001496) #19 Hmx3 (ENSDORG00000002862) #20 Hmx2 (ENSDORG00000028020) #21 Bub3 (ENSDORG00000002864) #22 Gpr26 (ENSDORG00000013184) #23 Cpxm2 (ENSDORG00000013185) #24 Chst15 (ENSDORG00000025969) #25 Oat (ENSDORG00000013083) #26 Lhpp (ENSDORG00000009409) #28 Fam53b (ENSDORG00000029982) #29 Eef1akmt2 (ENSDORG00000016286) #31 Abraxas2 (ENSDORG00000015413) #32 Zranb1 (ENSDORG00000010679) #34 ENSDORG00000026871 ##35 Tex36 (ENSDORG00000012145) #36 Edrf1 (ENSDORG00000012147) #37 Mmp21 (ENSDORG00000012150) Uros (ENSDORG00000012151) Bccip (ENSDORG00000008005) Myomorpha ANCESTRAL SPECIES 1 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00940000164044.a #15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Muroidea ANCESTRAL SPECIES 1 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00940000164044.a #15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Muroidea_A ANCESTRAL SPECIES ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00940000164044.a #15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Cricetidae ANCESTRAL SPECIES 1 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00940000171163 ENSGT00940000164044.a #15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00940000154430.e.b ##35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d Cricetidae_B ANCESTRAL SPECIES 1 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.a #15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00940000154430.e.b ##35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d Northern American deer mouse MODERN SPECIES Btbd16 (ENSPEMG00000021258) #7 Plekha1 (ENSPEMG00000021169) #9 Htra1 (ENSPEMG00000022401) #10 ENSPEMG00000028257 #13 ENSPEMG00000024600 #13 4933402N03Rik (ENSPEMG00000021538) #11 Cdcp3 (ENSPEMG00000020751) Cuzd1 (ENSPEMG00000022588) #14 Fam24a (ENSPEMG00000031419) #15 2310057M21Rik (ENSPEMG00000020879) #16 Pstk (ENSPEMG00000020718) #17 Ikzf5 (ENSPEMG00000025067) #18 Acadsb (ENSPEMG00000023029) #19 Hmx3 (ENSPEMG00000020746) #20 Hmx2 (ENSPEMG00000020567) #21 Bub3 (ENSPEMG00000022008) #22 Gpr26 (ENSPEMG00000021661) #23 Cpxm2 (ENSPEMG00000010409) #24 Chst15 (ENSPEMG00000025384) #25 Oat (ENSPEMG00000000214) #26 Nkx1-2 (ENSPEMG00000029119) #27 Lhpp (ENSPEMG00000025159) #28 Fam53b (ENSPEMG00000021254) #29 Eef1akmt2 (ENSPEMG00000012513) #31 Abraxas2 (ENSPEMG00000000943) #32 Zranb1 (ENSPEMG00000021601) #34 Ctbp2 (ENSPEMG00000016006) #35 ENSPEMG00000025858 Tex36 (ENSPEMG00000028129) #36 Edrf1 (ENSPEMG00000020993) #37 Mmp21 (ENSPEMG00000022056) Prairie vole MODERN SPECIES 16 Nsmce4a (ENSMOCG00000010931) ENSMOCG00000005035 Btbd16 (ENSMOCG00000019789) #7 Plekha1 (ENSMOCG00000017137) #9 Htra1 (ENSMOCG00000022155) #10 4933402N03Rik (ENSMOCG00000021499) #11 ENSMOCG00000002270 ENSMOCG00000015698 Cuzd1 (ENSMOCG00000019620) #14 2310057M21Rik (ENSMOCG00000017003) #16 Pstk (ENSMOCG00000020657) #17 Ikzf5 (ENSMOCG00000012731) #18 Acadsb (ENSMOCG00000014741) #19 Hmx3 (ENSMOCG00000017634) #20 Hmx2 (ENSMOCG00000019525) #21 Bub3 (ENSMOCG00000022149) #22 Gpr26 (ENSMOCG00000010123) #23 Cpxm2 (ENSMOCG00000016240) #24 Chst15 (ENSMOCG00000000598) #25 Oat (ENSMOCG00000020929) #26 Nkx1-2 (ENSMOCG00000000486) #27 Lhpp (ENSMOCG00000011963) #28 Fam53b (ENSMOCG00000021588) #29 Eef1akmt2 (ENSMOCG00000015688) #31 Abraxas2 (ENSMOCG00000001436) #32 Zranb1 (ENSMOCG00000013623) #34 ENSMOCG00000001972 ##35 Tex36 (ENSMOCG00000009219) #36 Edrf1 (ENSMOCG00000018530) #37 Mmp21 (ENSMOCG00000010101) Uros (ENSMOCG00000013059) Cricetinae ANCESTRAL SPECIES 2 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00940000171163 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Golden Hamster MODERN SPECIES 78 Bub3 (ENSMAUG00000018370) #22 Chinese hamster chok1gshd MODERN SPECIES 401 ENSCGRG00001021443 Btbd16 (ENSCGRG00001003604) #7 Plekha1 (ENSCGRG00001014871) #9 Htra1 (ENSCGRG00001020772) #10 4933402N03Rik (ENSCGRG00001021980) #11 ENSCGRG00001005841 Cuzd1 (ENSCGRG00001016877) #14 ENSCGRG00001021611 ##15 ENSCGRG00001010191 2310057M21Rik (ENSCGRG00001022004) #16 Pstk (ENSCGRG00001019704) #17 Ikzf5 (ENSCGRG00001000240) #18 Acadsb (ENSCGRG00001013507) #19 Hmx3 (ENSCGRG00001013357) #20 Hmx2 (ENSCGRG00001013576) #21 Bub3 (ENSCGRG00001014854) #22 ENSCGRG00001022673 Gpr26 (ENSCGRG00001000638) #23 Cpxm2 (ENSCGRG00001010429) #24 Chst15 (ENSCGRG00001015965) #25 Oat (ENSCGRG00001013711) #26 Nkx1-2 (ENSCGRG00001018225) #27 Lhpp (ENSCGRG00001021039) #28 Fam53b (ENSCGRG00001015896) #29 Eef1akmt2 (ENSCGRG00001018428) #31 Abraxas2 (ENSCGRG00001020558) #32 Zranb1 (ENSCGRG00001024189) #34 Ctbp2 (ENSCGRG00001017809) #35 Tex36 (ENSCGRG00001008694) #36 Edrf1 (ENSCGRG00001011728) #37 Mmp21 (ENSCGRG00001021076) Murinae ANCESTRAL SPECIES ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00940000164044.a #15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Mus ANCESTRAL SPECIES ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00940000164044.a #15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Mus_A ANCESTRAL SPECIES 1 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00940000164044.a #15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Mus_B ANCESTRAL SPECIES ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00940000164044.a #15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Mouse MODERN SPECIES 16 Btbd16 (ENSMUSG00000040298) #7 Plekha1 (ENSMUSG00000040268) #9 Htra1 (ENSMUSG00000006205) #10 Dmbt1 (ENSMUSG00000047517) #13 4933402N03Rik (ENSMUSG00000013668) #11 Cdcp3 (ENSMUSG00000006204) Cuzd1 (ENSMUSG00000040205) #14 Fam24b (ENSMUSG00000030858) ##15 Fam24a (ENSMUSG00000030859) #15 2310057M21Rik (ENSMUSG00000040177) #16 Pstk (ENSMUSG00000063179) #17 Ikzf5 (ENSMUSG00000040167) #18 Acadsb (ENSMUSG00000030861) #19 Hmx3 (ENSMUSG00000040148) #20 Hmx2 (ENSMUSG00000050100) #21 Bub3 (ENSMUSG00000066979) #22 Gpr26 (ENSMUSG00000040125) #23 Cpxm2 (ENSMUSG00000030862) #24 Chst15 (ENSMUSG00000030930) #25 Oat (ENSMUSG00000030934) #26 Nkx1-2 (ENSMUSG00000048528) #27 Lhpp (ENSMUSG00000030946) #28 Fam53b (ENSMUSG00000030956) #29 Eef1akmt2 (ENSMUSG00000030960) #31 Abraxas2 (ENSMUSG00000030965) #32 Zranb1 (ENSMUSG00000030967) #34 Ctbp2 (ENSMUSG00000030970) #35 Tex36 (ENSMUSG00000030976) #36 Edrf1 (ENSMUSG00000039990) #37 Mmp21 (ENSMUSG00000030981) Uros (ENSMUSG00000030979) Mus_C ANCESTRAL SPECIES 14 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000164044.b ##15 ENSGT00940000164044.a #15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Steppe mouse MODERN SPECIES 3376 ENSMSIG00000023009 4933402N03Rik (ENSMSIG00000023017) #11 Cdcp3 (ENSMSIG00000023024) ENSMSIG00000023221 Cuzd1 (ENSMSIG00000023224) #14 Fam24a (ENSMSIG00000023252) #15 2310057M21Rik (ENSMSIG00000023267) #16 Pstk (ENSMSIG00000023289) #17 Ikzf5 (ENSMSIG00000023302) #18 Acadsb (ENSMSIG00000023317) #19 Hmx3 (ENSMSIG00000023372) #20 Hmx2 (ENSMSIG00000023379) #21 Bub3 (ENSMSIG00000023396) #22 ENSMSIG00000023462 Gpr26 (ENSMSIG00000023472) #23 Cpxm2 (ENSMSIG00000023477) #24 Chst15 (ENSMSIG00000023493) #25 ENSMSIG00000023527 ENSMSIG00000023534 #26 Nkx1-2 (ENSMSIG00000023549) #27 Lhpp (ENSMSIG00000023563) #28 Fam53b (ENSMSIG00000023591) #29 Eef1akmt2 (ENSMSIG00000023639) #31 Abraxas2 (ENSMSIG00000023665) #32 Zranb1 (ENSMSIG00000023686) #34 Ctbp2 (ENSMSIG00000023710) #35 Tex36 (ENSMSIG00000023776) #36 Edrf1 (ENSMSIG00000023786) #37 spretus MODERN SPECIES 16 Tacc2 (MGP_SPRETEiJ_G0031672) Btbd16 (MGP_SPRETEiJ_G0031673) #7 Plekha1 (MGP_SPRETEiJ_G0031674) #9 Htra1 (MGP_SPRETEiJ_G0031675) #10 4933402N03Rik (MGP_SPRETEiJ_G0031676) #11 MGP_SPRETEiJ_G0031677 Cuzd1 (MGP_SPRETEiJ_G0031678) #14 Fam24b (MGP_SPRETEiJ_G0031679) ##15 Fam24a (MGP_SPRETEiJ_G0031680) #15 2310057M21Rik (MGP_SPRETEiJ_G0031681) #16 Pstk (MGP_SPRETEiJ_G0031682) #17 Ikzf5 (MGP_SPRETEiJ_G0031683) #18 Acadsb (MGP_SPRETEiJ_G0031684) #19 Hmx3 (MGP_SPRETEiJ_G0031685) #20 Hmx2 (MGP_SPRETEiJ_G0031686) #21 Bub3 (MGP_SPRETEiJ_G0031687) #22 Gpr26 (MGP_SPRETEiJ_G0031688) #23 Cpxm2 (MGP_SPRETEiJ_G0031689) #24 Chst15 (MGP_SPRETEiJ_G0031690) #25 Oat (MGP_SPRETEiJ_G0031691) #26 Nkx1-2 (MGP_SPRETEiJ_G0031692) #27 Lhpp (MGP_SPRETEiJ_G0031693) #28 Fam53b (MGP_SPRETEiJ_G0031694) #29 Eef1akmt2 (MGP_SPRETEiJ_G0031695) #31 Abraxas2 (MGP_SPRETEiJ_G0031696) #32 Zranb1 (MGP_SPRETEiJ_G0031697) #34 Ctbp2 (MGP_SPRETEiJ_G0031698) #35 Tex36 (MGP_SPRETEiJ_G0031699) #36 Edrf1 (MGP_SPRETEiJ_G0031700) #37 Mmp21 (MGP_SPRETEiJ_G0031701) Uros (MGP_SPRETEiJ_G0031702) Ryukyu mouse MODERN SPECIES 16 Tacc2 (MGP_CAROLIEiJ_G0030558) Btbd16 (MGP_CAROLIEiJ_G0030559) #7 MGP_CAROLIEiJ_G0030560 #9 Htra1 (MGP_CAROLIEiJ_G0030561) #10 4933402N03Rik (MGP_CAROLIEiJ_G0030562) #11 MGP_CAROLIEiJ_G0030563 Cuzd1 (MGP_CAROLIEiJ_G0030564) #14 Fam24b (MGP_CAROLIEiJ_G0030565) ##15 Fam24a (MGP_CAROLIEiJ_G0030566) #15 2310057M21Rik (MGP_CAROLIEiJ_G0030567) #16 Pstk (MGP_CAROLIEiJ_G0030568) #17 Ikzf5 (MGP_CAROLIEiJ_G0030569) #18 Acadsb (MGP_CAROLIEiJ_G0030570) #19 Hmx3 (MGP_CAROLIEiJ_G0030571) #20 Hmx2 (MGP_CAROLIEiJ_G0030572) #21 Bub3 (MGP_CAROLIEiJ_G0030573) #22 Gpr26 (MGP_CAROLIEiJ_G0030574) #23 Cpxm2 (MGP_CAROLIEiJ_G0030575) #24 Chst15 (MGP_CAROLIEiJ_G0030576) #25 Oat (MGP_CAROLIEiJ_G0030577) #26 Nkx1-2 (MGP_CAROLIEiJ_G0030578) #27 Lhpp (MGP_CAROLIEiJ_G0030579) #28 Fam53b (MGP_CAROLIEiJ_G0030580) #29 Eef1akmt2 (MGP_CAROLIEiJ_G0030581) #31 Abraxas2 (MGP_CAROLIEiJ_G0030582) #32 Zranb1 (MGP_CAROLIEiJ_G0030583) #34 Ctbp2 (MGP_CAROLIEiJ_G0030584) #35 Tex36 (MGP_CAROLIEiJ_G0030585) #36 Edrf1 (MGP_CAROLIEiJ_G0030586) #37 Mmp21 (MGP_CAROLIEiJ_G0030587) Uros (MGP_CAROLIEiJ_G0030588) Shrew mouse MODERN SPECIES Tacc2 (MGP_PahariEiJ_G0013765) Btbd16 (MGP_PahariEiJ_G0013766) #7 Plekha1 (MGP_PahariEiJ_G0013767) #9 Htra1 (MGP_PahariEiJ_G0013768) #10 4933402N03Rik (MGP_PahariEiJ_G0013769) #11 MGP_PahariEiJ_G0013770 Cuzd1 (MGP_PahariEiJ_G0013771) #14 Fam24b (MGP_PahariEiJ_G0013772) ##15 Fam24a (MGP_PahariEiJ_G0013773) #15 2310057M21Rik (MGP_PahariEiJ_G0013774) #16 Pstk (MGP_PahariEiJ_G0013775) #17 Ikzf5 (MGP_PahariEiJ_G0013776) #18 Acadsb (MGP_PahariEiJ_G0013777) #19 Hmx3 (MGP_PahariEiJ_G0013778) #20 Hmx2 (MGP_PahariEiJ_G0013779) #21 Bub3 (MGP_PahariEiJ_G0013780) #22 Gpr26 (MGP_PahariEiJ_G0013781) #23 Cpxm2 (MGP_PahariEiJ_G0013782) #24 Chst15 (MGP_PahariEiJ_G0013783) #25 Oat (MGP_PahariEiJ_G0013784) #26 Nkx1-2 (MGP_PahariEiJ_G0013785) #27 Lhpp (MGP_PahariEiJ_G0013786) #28 Fam53b (MGP_PahariEiJ_G0013787) #29 MGP_PahariEiJ_G0013788 Abraxas2 (MGP_PahariEiJ_G0013789) #32 Zranb1 (MGP_PahariEiJ_G0013790) #34 Ctbp2 (MGP_PahariEiJ_G0013791) #35 Tex36 (MGP_PahariEiJ_G0013792) #36 Edrf1 (MGP_PahariEiJ_G0013793) #37 Mmp21 (MGP_PahariEiJ_G0013794) MGP_PahariEiJ_G0013795 Rat MODERN SPECIES Plekha1 (ENSRNOG00000020497) #9 Htra1 (ENSRNOG00000020533) #10 Dmbt1 (ENSRNOG00000020560) #13 LOC100911413 (ENSRNOG00000034038) #13 C1h10orf120 (ENSRNOG00000022900) #11 Dmbt1l1 (ENSRNOG00000022737) Cuzd1 (ENSRNOG00000029945) #14 RGD1559891 (ENSRNOG00000026440) Fam24b (ENSRNOG00000026419) ##15 C1h10orf88 (ENSRNOG00000020597) #16 Pstk (ENSRNOG00000020605) #17 Ikzf5 (ENSRNOG00000025651) #18 Acadsb (ENSRNOG00000020624) #19 Hmx3 (ENSRNOG00000020637) #20 Hmx2 (ENSRNOG00000020638) #21 Bub3 (ENSRNOG00000020643) #22 Gpr26 (ENSRNOG00000047057) #23 Cpxm2 (ENSRNOG00000015902) #24 AABR07005886.1 (ENSRNOG00000053539) Chst15 (ENSRNOG00000016267) #25 ENSRNOG00000070567 Oat (ENSRNOG00000016807) #26 Nkx1-2 (ENSRNOG00000017006) #27 Lhpp (ENSRNOG00000017097) #28 Fam53b (ENSRNOG00000061348) #29 Eef1akmt2 (ENSRNOG00000017137) #31 Abraxas2 (ENSRNOG00000017222) #32 ENSRNOG00000064132 Zranb1 (ENSRNOG00000017294) #34 Ctbp2 (ENSRNOG00000017326) #35 ENSRNOG00000063891 Upper Galilee mountains blind mole rat MODERN SPECIES 556 ENSNGAG00000012564 Btbd16 (ENSNGAG00000019177) #7 Plekha1 (ENSNGAG00000016064) #9 Htra1 (ENSNGAG00000014707) #10 4933402N03Rik (ENSNGAG00000013572) #11 ENSNGAG00000009762 Cuzd1 (ENSNGAG00000005205) #14 ENSNGAG00000001948 ##15 ENSNGAG00000000938 ##15 2310057M21Rik (ENSNGAG00000020488) #16 Pstk (ENSNGAG00000018855) #17 Ikzf5 (ENSNGAG00000014976) #18 Acadsb (ENSNGAG00000003415) #19 Hmx3 (ENSNGAG00000000752) #20 Hmx2 (ENSNGAG00000018683) #21 Bub3 (ENSNGAG00000013186) #22 Gpr26 (ENSNGAG00000012118) #23 Cpxm2 (ENSNGAG00000020180) #24 Chst15 (ENSNGAG00000017553) #25 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 70 ENSJJAG00000015501 Btbd16 (ENSJJAG00000012283) #7 Plekha1 (ENSJJAG00000019344) #9 Htra1 (ENSJJAG00000012131) #10 4933402N03Rik (ENSJJAG00000001575) #11 ENSJJAG00000011591 Cuzd1 (ENSJJAG00000022053) #14 ENSJJAG00000018148 ##15 Fam24a (ENSJJAG00000011583) #15 2310057M21Rik (ENSJJAG00000022848) #16 Pstk (ENSJJAG00000021183) #17 Ikzf5 (ENSJJAG00000000850) #18 ENSJJAG00000017926 #19 Hmx3 (ENSJJAG00000017208) #20 Hmx2 (ENSJJAG00000021150) #21 ENSJJAG00000019122 #22 Gpr26 (ENSJJAG00000024093) #23 Cpxm2 (ENSJJAG00000024326) #24 Chst15 (ENSJJAG00000020736) #25 ENSJJAG00000013687 #26 ENSJJAG00000006526 Lhpp (ENSJJAG00000019644) #28 Fam53b (ENSJJAG00000017105) #29 Eef1akmt2 (ENSJJAG00000010893) #31 Abraxas2 (ENSJJAG00000012646) #32 ENSJJAG00000018536 Zranb1 (ENSJJAG00000009904) #34 ENSJJAG00000022075 ##35 Tex36 (ENSJJAG00000020679) #36 Edrf1 (ENSJJAG00000015613) #37 Mmp21 (ENSJJAG00000017716) Lesser Egyptian jerboa MODERN SPECIES 43 Mtrf1 (ENSJJAG00000017590) ENSJJAG00000001187 Wbp4 (ENSJJAG00000014406) Elf1 (ENSJJAG00000018266) Sugt1 (ENSJJAG00000017869) Cnmd (ENSJJAG00000011534) Pcdh8 (ENSJJAG00000017606) Olfm4 (ENSJJAG00000018241) ENSJJAG00000022681 ENSJJAG00000024366 ENSJJAG00000009571 ENSJJAG00000021490 Pcdh17 (ENSJJAG00000015973) ENSJJAG00000017379 ENSJJAG00000023292 ENSJJAG00000016423 #22 Diaph3 (ENSJJAG00000000502) Tdrd3 (ENSJJAG00000023665) ENSJJAG00000015296 ENSJJAG00000000679 ENSJJAG00000006345 Pcdh9 (ENSJJAG00000009893) ENSJJAG00000000702 ENSJJAG00000011337 Klhl1 (ENSJJAG00000011220) ENSJJAG00000001120 ENSJJAG00000017740 Dach1 (ENSJJAG00000000600) ENSJJAG00000016515 Bora (ENSJJAG00000022242) Dis3 (ENSJJAG00000011607) Lagomorpha ANCESTRAL SPECIES 142 ENSGT00940000162108.tb ENSGT00940000165716 ENSGT00940000154525.b.a #14 ENSGT00940000171163 ENSGT00940000164044 #15 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 Rabbit MODERN SPECIES 546 ENSOCUG00000001946 CUZD1 (ENSOCUG00000001508) #14 ENSOCUG00000024624 #16 ENSOCUG00000025051 #15 ENSOCUG00000021184 #16 ENSOCUG00000008745 #17 ENSOCUG00000013340 #18 ACADSB (ENSOCUG00000005330) #19 HMX3 (ENSOCUG00000033472) #20 HMX2 (ENSOCUG00000014183) #21 BUB3 (ENSOCUG00000017446) #22 GPR26 (ENSOCUG00000017501) #23 CPXM2 (ENSOCUG00000010941) #24 Pika MODERN SPECIES 3812 ENSOPRG00000014202 #17 IKZF5 (ENSOPRG00000014214) #18 ACADSB (ENSOPRG00000014224) #19 HMX3 (ENSOPRG00000014239) #20 HMX2 (ENSOPRG00000014263) #21 BUB3 (ENSOPRG00000014276) #22 Tree shrew MODERN SPECIES 4810 BUB3 (ENSTBEG00000014484) #22 Primates ANCESTRAL SPECIES 16 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT01010000224541 ENSGT00940000162108.tb ENSGT00940000162108.sb.a ENSGT00940000162108.sb.b ENSGT00940000154525.b.a #14 ENSGT00940000163005 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00940000168312 ENSGT00390000014797 #37 ENSGT00940000159140.d Strepsirrhini ANCESTRAL SPECIES 11 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT01010000224541 ENSGT00940000162108.tb ENSGT00940000162108.sb.a ENSGT00940000162108.sb.b ENSGT00940000154525.b.a #14 ENSGT00940000163005 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Lemuriformes ANCESTRAL SPECIES 7 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT01010000224541 ENSGT00940000162108.tb ENSGT00940000162108.sb.a ENSGT00940000162108.sb.b ENSGT00940000154525.b.a #14 ENSGT00390000017384.j #16 ENSGT00940000163005 ENSGT00390000017384.i #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Lemuriformes_a ANCESTRAL SPECIES 42 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT01010000224541 ENSGT00940000162108.tb ENSGT00940000162108.sb.a ENSGT00940000162108.sb.b ENSGT00940000154525.b.a #14 ENSGT00940000163005 ENSGT00390000017384.i #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Coquerels sifaka MODERN SPECIES 258 NSMCE4A (ENSPCOG00000011420) ENSPCOG00000026897 BTBD16 (ENSPCOG00000020204) #7 PLEKHA1 (ENSPCOG00000027097) #9 HTRA1 (ENSPCOG00000021590) #10 ENSPCOG00000015298 #13 C10orf120 (ENSPCOG00000020092) #11 CUZD1 (ENSPCOG00000026175) #14 ENSPCOG00000008575 ENSPCOG00000018262 #16 PSTK (ENSPCOG00000015070) #17 IKZF5 (ENSPCOG00000024918) #18 ACADSB (ENSPCOG00000017961) #19 HMX3 (ENSPCOG00000004827) #20 HMX2 (ENSPCOG00000021307) #21 BUB3 (ENSPCOG00000024614) #22 GPR26 (ENSPCOG00000019047) #23 CPXM2 (ENSPCOG00000022596) #24 CHST15 (ENSPCOG00000028486) #25 OAT (ENSPCOG00000018744) #26 NKX1-2 (ENSPCOG00000021546) #27 LHPP (ENSPCOG00000022151) #28 FAM53B (ENSPCOG00000028062) #29 EEF1AKMT2 (ENSPCOG00000017778) #31 ABRAXAS2 (ENSPCOG00000013791) #32 Greater bamboo lemur MODERN SPECIES 1025 ENSPSMG00000016359 #16 ENSPSMG00000016356 #16 PSTK (ENSPSMG00000016344) #17 IKZF5 (ENSPSMG00000016336) #18 ACADSB (ENSPSMG00000016312) #19 HMX3 (ENSPSMG00000016240) #20 HMX2 (ENSPSMG00000016234) #21 BUB3 (ENSPSMG00000016216) #22 GPR26 (ENSPSMG00000016141) #23 CPXM2 (ENSPSMG00000016129) #24 CHST15 (ENSPSMG00000016114) #25 OAT (ENSPSMG00000016089) #26 NKX1-2 (ENSPSMG00000016066) #27 LHPP (ENSPSMG00000016032) #28 FAM53B (ENSPSMG00000015965) #29 Mouse lemur MODERN SPECIES 6 BTBD16 (ENSMICG00000009849) #7 PLEKHA1 (ENSMICG00000037532) #9 HTRA1 (ENSMICG00000009867) #10 ENSMICG00000037650 ENSMICG00000037150 #13 C10orf120 (ENSMICG00000008567) #11 CUZD1 (ENSMICG00000044009) #14 ENSMICG00000035025 #16 ENSMICG00000008610 ENSMICG00000015190 #16 PSTK (ENSMICG00000005140) #17 IKZF5 (ENSMICG00000043450) #18 ACADSB (ENSMICG00000000462) #19 HMX3 (ENSMICG00000000467) #20 HMX2 (ENSMICG00000000468) #21 BUB3 (ENSMICG00000000469) #22 GPR26 (ENSMICG00000045590) #23 CPXM2 (ENSMICG00000008842) #24 CHST15 (ENSMICG00000008853) #25 OAT (ENSMICG00000003894) #26 NKX1-2 (ENSMICG00000046032) #27 LHPP (ENSMICG00000003900) #28 FAM53B (ENSMICG00000003907) #29 EEF1AKMT2 (ENSMICG00000029191) #31 ABRAXAS2 (ENSMICG00000031916) #32 ZRANB1 (ENSMICG00000000273) #34 CTBP2 (ENSMICG00000000275) #35 TEX36 (ENSMICG00000026931) #36 EDRF1 (ENSMICG00000006179) #37 MMP21 (ENSMICG00000006186) UROS (ENSMICG00000006188) Bushbaby MODERN SPECIES 190 C10orf120 (ENSOGAG00000008685) #11 ENSOGAG00000030945 CUZD1 (ENSOGAG00000008700) #14 PSTK (ENSOGAG00000008707) #17 IKZF5 (ENSOGAG00000032070) #18 ACADSB (ENSOGAG00000008715) #19 HMX3 (ENSOGAG00000033826) #20 HMX2 (ENSOGAG00000011247) #21 BUB3 (ENSOGAG00000011249) #22 GPR26 (ENSOGAG00000015968) #23 CPXM2 (ENSOGAG00000015976) #24 CHST15 (ENSOGAG00000004496) #25 OAT (ENSOGAG00000011006) #26 LHPP (ENSOGAG00000011008) #28 FAM53B (ENSOGAG00000033416) #29 ENSOGAG00000011015 #31 ABRAXAS2 (ENSOGAG00000011022) #32 ZRANB1 (ENSOGAG00000008345) #34 ENSOGAG00000024152 ##35 TEX36 (ENSOGAG00000010883) #36 EDRF1 (ENSOGAG00000010889) #37 MMP21 (ENSOGAG00000010897) UROS (ENSOGAG00000010900) BCCIP (ENSOGAG00000010901) Haplorrhini ANCESTRAL SPECIES 11 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000163005 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00940000168312 ENSGT00390000014797 #37 ENSGT00940000159140.d Simiiformes ANCESTRAL SPECIES 17 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00390000017384.h #16 ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00940000168312 ENSGT00390000014797 #37 ENSGT00940000159140.d Platyrrhini ANCESTRAL SPECIES 14 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00390000017384.h #16 ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Cebidae ANCESTRAL SPECIES 17 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Marmoset MODERN SPECIES 3 HTRA1 (ENSCJAG00000001226) #10 ENSCJAG00000082859 #13 ENSCJAG00000001157 #13 SPADH (ENSCJAG00000067245) C10orf120 (ENSCJAG00000012735) #11 ENSCJAG00000061021 CUZD1 (ENSCJAG00000001132) #14 FAM24B (ENSCJAG00000077353) FAM24A (ENSCJAG00000086502) C10orf88 (ENSCJAG00000001125) #16 PSTK (ENSCJAG00000001117) #17 IKZF5 (ENSCJAG00000065257) #18 ACADSB (ENSCJAG00000001092) #19 HMX3 (ENSCJAG00000085658) #20 HMX2 (ENSCJAG00000001081) #21 BUB3 (ENSCJAG00000001066) #22 GPR26 (ENSCJAG00000008190) #23 CPXM2 (ENSCJAG00000046273) #24 ENSCJAG00000082547 CHST15 (ENSCJAG00000010285) #25 ENSCJAG00000012633 #26 NKX1-2 (ENSCJAG00000068730) #27 LHPP (ENSCJAG00000012614) #28 FAM53B (ENSCJAG00000012593) #29 EEF1AKMT2 (ENSCJAG00000078355) #31 ABRAXAS2 (ENSCJAG00000068604) #32 ZRANB1 (ENSCJAG00000012573) #34 CTBP2 (ENSCJAG00000012539) #35 ENSCJAG00000074181 ENSCJAG00000079705 TEX36 (ENSCJAG00000071416) #36 Cebidae_a ANCESTRAL SPECIES 13 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Capuchin MODERN SPECIES 235 NLRP12 (ENSCCAG00000037077) ARMS2 (ENSCCAG00000038121) HTRA1 (ENSCCAG00000028776) #10 ENSCCAG00000033744 #13 C10orf120 (ENSCCAG00000020897) #11 CUZD1 (ENSCCAG00000010094) #14 FAM24B (ENSCCAG00000033608) FAM24A (ENSCCAG00000034029) C10orf88 (ENSCCAG00000029118) #16 PSTK (ENSCCAG00000027813) #17 IKZF5 (ENSCCAG00000030805) #18 ENSCCAG00000028196 ACADSB (ENSCCAG00000025590) #19 HMX3 (ENSCCAG00000021254) #20 HMX2 (ENSCCAG00000027587) #21 BUB3 (ENSCCAG00000035243) #22 GPR26 (ENSCCAG00000023527) #23 CPXM2 (ENSCCAG00000029590) #24 CHST15 (ENSCCAG00000023027) #25 OAT (ENSCCAG00000022249) #26 NKX1-2 (ENSCCAG00000032391) #27 LHPP (ENSCCAG00000022256) #28 FAM53B (ENSCCAG00000032637) #29 EEF1AKMT2 (ENSCCAG00000003096) #31 ABRAXAS2 (ENSCCAG00000004279) #32 ENSCCAG00000034725 ZRANB1 (ENSCCAG00000022748) #34 CTBP2 (ENSCCAG00000001371) #35 Bolivian squirrel monkey MODERN SPECIES 47 TACC2 (ENSSBOG00000034773) BTBD16 (ENSSBOG00000030401) #7 PLEKHA1 (ENSSBOG00000032388) #9 HTRA1 (ENSSBOG00000022966) #10 ENSSBOG00000033598 #13 C10orf120 (ENSSBOG00000021674) #11 CUZD1 (ENSSBOG00000019778) #14 FAM24B (ENSSBOG00000034235) FAM24A (ENSSBOG00000031885) C10orf88 (ENSSBOG00000030071) #16 PSTK (ENSSBOG00000035695) #17 IKZF5 (ENSSBOG00000021900) #18 ACADSB (ENSSBOG00000026062) #19 HMX3 (ENSSBOG00000023320) #20 HMX2 (ENSSBOG00000021232) #21 BUB3 (ENSSBOG00000025883) #22 GPR26 (ENSSBOG00000029415) #23 CPXM2 (ENSSBOG00000036010) #24 CHST15 (ENSSBOG00000027985) #25 OAT (ENSSBOG00000020910) #26 NKX1-2 (ENSSBOG00000018166) #27 LHPP (ENSSBOG00000030027) #28 FAM53B (ENSSBOG00000025047) #29 EEF1AKMT2 (ENSSBOG00000023032) #31 ABRAXAS2 (ENSSBOG00000034509) #32 ZRANB1 (ENSSBOG00000034635) #34 CTBP2 (ENSSBOG00000033291) #35 TEX36 (ENSSBOG00000022299) #36 EDRF1 (ENSSBOG00000011981) #37 MMP21 (ENSSBOG00000020252) UROS (ENSSBOG00000032791) Mas night monkey MODERN SPECIES 802 PLEKHA1 (ENSANAG00000026667) #9 ARMS2 (ENSANAG00000024354) HTRA1 (ENSANAG00000023219) #10 ENSANAG00000030579 #13 C10orf120 (ENSANAG00000027570) #11 CUZD1 (ENSANAG00000021440) #14 FAM24B (ENSANAG00000020828) ENSANAG00000018257 #16 FAM24A (ENSANAG00000014047) C10orf88 (ENSANAG00000020459) #16 PSTK (ENSANAG00000037855) #17 IKZF5 (ENSANAG00000032569) #18 ACADSB (ENSANAG00000029052) #19 HMX3 (ENSANAG00000024547) #20 HMX2 (ENSANAG00000036077) #21 BUB3 (ENSANAG00000034868) #22 GPR26 (ENSANAG00000025234) #23 CPXM2 (ENSANAG00000033303) #24 CHST15 (ENSANAG00000036170) #25 OAT (ENSANAG00000027976) #26 NKX1-2 (ENSANAG00000027849) #27 LHPP (ENSANAG00000030254) #28 FAM53B (ENSANAG00000023364) #29 EEF1AKMT2 (ENSANAG00000020212) #31 ABRAXAS2 (ENSANAG00000036240) #32 ZRANB1 (ENSANAG00000028845) #34 CTBP2 (ENSANAG00000023803) #35 TEX36 (ENSANAG00000020229) #36 EDRF1 (ENSANAG00000029305) #37 MMP21 (ENSANAG00000034665) UROS (ENSANAG00000022312) Catarrhini ANCESTRAL SPECIES 18 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00390000017384.h #16 ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00910000147603 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00500000045038.y.a.a ENSGT00390000012491 #36 ENSGT00940000168312 Hominoidea DUPLICATION Hominoidea ANCESTRAL SPECIES 11 ENSGT00650000095054 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00390000017384.h #16 ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.g #22 ENSGT00950000183001.a.a #23 ENSGT00910000147603 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00500000045038.y.a.a ENSGT00390000012491 #36 ENSGT00950000182987.c.a.a.db.b Hominidae ANCESTRAL SPECIES 13 ENSGT00650000095054 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00390000017384.h #16 ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.g #22 ENSGT00950000183001.a.a #23 ENSGT00910000147603 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00500000045038.y.a.a ENSGT00390000012491 #36 ENSGT00950000182987.c.a.a.db.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 17 ENSGT00650000095054 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00390000017384.h #16 ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.g #22 ENSGT00950000183001.a.a #23 ENSGT00910000147603 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00500000045038.y.a.a ENSGT00390000012491 #36 ENSGT00950000182987.c.a.a.db.b Gorilla MODERN SPECIES 1 BTBD16 (ENSGGOG00000004960) #7 PLEKHA1 (ENSGGOG00000005120) #9 ARMS2 (ENSGGOG00000037501) HTRA1 (ENSGGOG00000004853) #10 C10orf120 (ENSGGOG00000026034) #11 CUZD1 (ENSGGOG00000007184) #14 FAM24B (ENSGGOG00000007190) ENSGGOG00000006191 #16 FAM24A (ENSGGOG00000007194) C10orf88 (ENSGGOG00000007191) #16 PSTK (ENSGGOG00000003866) #17 IKZF5 (ENSGGOG00000003823) #18 ACADSB (ENSGGOG00000003827) #19 HMX3 (ENSGGOG00000023271) #20 HMX2 (ENSGGOG00000039592) #21 BUB3 (ENSGGOG00000023971) #22 ENSGGOG00000037837 #23 ENSGGOG00000038946 CPXM2 (ENSGGOG00000007111) #24 CHST15 (ENSGGOG00000009734) #25 OAT (ENSGGOG00000000848) #26 NKX1-2 (ENSGGOG00000042370) #27 ENSGGOG00000009416 #28 FAM53B (ENSGGOG00000001653) #29 EEF1AKMT2 (ENSGGOG00000024976) #31 ABRAXAS2 (ENSGGOG00000014025) #32 ZRANB1 (ENSGGOG00000016848) #34 ENSGGOG00000036916 ##35 CTBP2 (ENSGGOG00000007304) #35 TEX36 (ENSGGOG00000007492) #36 ENSGGOG00000038821 Homo/Pan group ANCESTRAL SPECIES 18 ENSGT00650000095054 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00390000017384.h #16 ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.g #22 ENSGT00950000183001.a.a #23 ENSGT00910000147603 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00500000045038.y.a.a ENSGT00390000012491 #36 ENSGT00950000182987.c.a.a.db.b Human MODERN SPECIES 1 PLEKHA1 (ENSG00000107679) #9 ARMS2 (ENSG00000254636) HTRA1 (ENSG00000166033) #10 DMBT1 (ENSG00000187908) #13 SPADH (ENSG00000286135) C10orf120 (ENSG00000183559) #11 CUZD1 (ENSG00000138161) #14 FAM24B (ENSG00000213185) FAM24A (ENSG00000203795) C10orf88 (ENSG00000119965) #16 PSTK (ENSG00000179988) #17 IKZF5 (ENSG00000095574) #18 ACADSB (ENSG00000196177) #19 HMX3 (ENSG00000188620) #20 HMX2 (ENSG00000188816) #21 BUB3 (ENSG00000154473) #22 GPR26 (ENSG00000154478) #23 CPXM2 (ENSG00000121898) #24 CHST15 (ENSG00000182022) #25 OAT (ENSG00000065154) #26 NKX1-2 (ENSG00000229544) #27 LHPP (ENSG00000107902) #28 FAM53B (ENSG00000189319) #29 EEF1AKMT2 (ENSG00000203791) #31 ABRAXAS2 (ENSG00000165660) #32 ZRANB1 (ENSG00000019995) #34 CTBP2 (ENSG00000175029) #35 TEX36 (ENSG00000175018) #36 EDRF1 (ENSG00000107938) #37 MMP21 (ENSG00000154485) UROS (ENSG00000188690) Pan ANCESTRAL SPECIES 16 ENSGT00940000155157 #9 ENSGT00650000095054 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00390000017384.h #16 ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.g #22 ENSGT00950000183001.a.a #23 ENSGT00910000147603 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00500000045038.y.a.a ENSGT00390000012491 #36 ENSGT00950000182987.c.a.a.db.b Bonobo MODERN SPECIES 1 PLEKHA1 (ENSPPAG00000003709) #9 ARMS2 (ENSPPAG00000041770) HTRA1 (ENSPPAG00000000055) #10 DMBT1 (ENSPPAG00000029246) #13 C10orf120 (ENSPPAG00000027128) #11 CUZD1 (ENSPPAG00000038806) #14 FAM24B (ENSPPAG00000030186) ENSPPAG00000026413 #16 FAM24A (ENSPPAG00000029503) C10orf88 (ENSPPAG00000040286) #16 PSTK (ENSPPAG00000030978) #17 IKZF5 (ENSPPAG00000032125) #18 ACADSB (ENSPPAG00000036912) #19 HMX3 (ENSPPAG00000043159) #20 ENSPPAG00000043570 #21 BUB3 (ENSPPAG00000030058) #22 ENSPPAG00000040773 #23 ENSPPAG00000024928 CPXM2 (ENSPPAG00000037917) #24 CHST15 (ENSPPAG00000037921) #25 OAT (ENSPPAG00000034558) #26 ENSPPAG00000037855 #27 LHPP (ENSPPAG00000041898) #28 FAM53B (ENSPPAG00000027228) #29 EEF1AKMT2 (ENSPPAG00000034943) #31 ABRAXAS2 (ENSPPAG00000031972) #32 ZRANB1 (ENSPPAG00000036455) #34 CTBP2 (ENSPPAG00000032942) #35 TEX36 (ENSPPAG00000034284) #36 EDRF1 (ENSPPAG00000028277) #37 MMP21 (ENSPPAG00000043548) Chimpanzee MODERN SPECIES 1 PLEKHA1 (ENSPTRG00000003010) #9 ARMS2 (ENSPTRG00000051999) HTRA1 (ENSPTRG00000003011) #10 DMBT1 (ENSPTRG00000022758) #13 C10H10orf120 (ENSPTRG00000003012) #11 CUZD1 (ENSPTRG00000003015) #14 FAM24B (ENSPTRG00000034300) ENSPTRG00000048474 #16 FAM24A (ENSPTRG00000029673) C10H10orf88 (ENSPTRG00000003017) #16 PSTK (ENSPTRG00000003018) #17 IKZF5 (ENSPTRG00000003019) #18 ACADSB (ENSPTRG00000003020) #19 HMX3 (ENSPTRG00000046925) #20 HMX2 (ENSPTRG00000047334) #21 BUB3 (ENSPTRG00000044868) #22 GPR26 (ENSPTRG00000045403) #23 ENSPTRG00000043279 CPXM2 (ENSPTRG00000003027) #24 CHST15 (ENSPTRG00000023167) #25 OAT (ENSPTRG00000003028) #26 NKX1-2 (ENSPTRG00000046548) #27 LHPP (ENSPTRG00000003030) #28 FAM53B (ENSPTRG00000003031) #29 EEF1AKMT2 (ENSPTRG00000032571) #31 ABRAXAS2 (ENSPTRG00000003033) #32 ZRANB1 (ENSPTRG00000003034) #34 CTBP2 (ENSPTRG00000003035) #35 ENSPTRG00000050946 TEX36 (ENSPTRG00000003037) #36 ENSPTRG00000052584 Orangutan MODERN SPECIES 1 PLEKHA1 (ENSPPYG00000002715) #9 HTRA1 (ENSPPYG00000002716) #10 ENSPPYG00000002717 #13 SPADH (ENSPPYG00000002718) C10orf120 (ENSPPYG00000002719) #11 CUZD1 (ENSPPYG00000002722) #14 ENSPPYG00000030182 ENSPPYG00000037859 #16 FAM24A (ENSPPYG00000002724) C10orf88 (ENSPPYG00000002725) #16 PSTK (ENSPPYG00000002726) #17 IKZF5 (ENSPPYG00000038620) #18 ACADSB (ENSPPYG00000002728) #19 HMX3 (ENSPPYG00000002729) #20 HMX2 (ENSPPYG00000033793) #21 BUB3 (ENSPPYG00000002731) #22 GPR26 (ENSPPYG00000002734) #23 CPXM2 (ENSPPYG00000002735) #24 CHST15 (ENSPPYG00000002736) #25 OAT (ENSPPYG00000002737) #26 NKX1-2 (ENSPPYG00000039436) #27 LHPP (ENSPPYG00000002740) #28 FAM53B (ENSPPYG00000002741) #29 EEF1AKMT2 (ENSPPYG00000002742) #31 ABRAXAS2 (ENSPPYG00000033191) #32 ZRANB1 (ENSPPYG00000002745) #34 CTBP2 (ENSPPYG00000002746) #35 TEX36 (ENSPPYG00000002747) #36 ENSPPYG00000035256 EDRF1 (ENSPPYG00000002749) #37 MMP21 (ENSPPYG00000002750) Gibbon MODERN SPECIES 18 PLEKHA1 (ENSNLEG00000016991) #9 ARMS2 (ENSNLEG00000016999) HTRA1 (ENSNLEG00000017001) #10 ENSNLEG00000017018 #13 C10orf120 (ENSNLEG00000017025) #11 CUZD1 (ENSNLEG00000017027) #14 FAM24B (ENSNLEG00000028659) ENSNLEG00000017042 #16 FAM24A (ENSNLEG00000017045) C10orf88 (ENSNLEG00000017047) #16 PSTK (ENSNLEG00000029733) #17 IKZF5 (ENSNLEG00000027055) #18 ACADSB (ENSNLEG00000026715) #19 HMX3 (ENSNLEG00000032860) #20 HMX2 (ENSNLEG00000033504) #21 BUB3 (ENSNLEG00000030093) #22 GPR26 (ENSNLEG00000030894) #23 ENSNLEG00000027584 CPXM2 (ENSNLEG00000017056) #24 ENSNLEG00000029527 CHST15 (ENSNLEG00000027714) #25 OAT (ENSNLEG00000000482) #26 LHPP (ENSNLEG00000000521) #28 FAM53B (ENSNLEG00000000535) #29 EEF1AKMT2 (ENSNLEG00000000539) #31 ABRAXAS2 (ENSNLEG00000000563) #32 ZRANB1 (ENSNLEG00000000584) #34 CTBP2 (ENSNLEG00000000608) #35 ENSNLEG00000035995 EDRF1 (ENSNLEG00000000623) #37 MMP21 (ENSNLEG00000000684) Hominoidea ANCESTRAL SPECIES ENSGT00950000183091.A.a.h #22 Hominidae ANCESTRAL SPECIES ENSGT00950000183091.A.a.h #22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00950000183091.A.a.h #22 Homo/Pan group ANCESTRAL SPECIES ENSGT00950000183091.A.a.h #22 Pan ANCESTRAL SPECIES 13 ENSGT00940000155993 ENSGT00940000159404 ENSGT00940000158685 ENSGT00940000155480 ENSGT00940000157682.B ENSGT00400000023684 ENSGT00890000139436.B ENSGT00390000010382 ENSGT00390000005941 ENSGT00390000010292 ENSGT00390000013347.a ENSGT00390000010852 ENSGT00940000155659 ENSGT00550000075044 ENSGT00940000160513 ENSGT00950000183091.A.a.h #22 ENSGT00940000156246 ENSGT00940000162392.e ENSGT00940000154738.a.k ENSGT00910000148006 ENSGT00940000155419 ENSGT00940000162514 ENSGT00940000156003 ENSGT00550000074844 ENSGT01070000253775.a.d.a.a.a.b ENSGT00510000047522 ENSGT01070000253775.a.d.a.a.a.a ENSGT00390000011863.d ENSGT00550000074907 ENSGT01050000244841.A.b.b.a ENSGT00390000004586 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 20 TES (ENSPTRG00000023877) TFEC (ENSPTRG00000047353) MDFIC (ENSPTRG00000019609) FOXP2 (ENSPTRG00000019608) PPP1R3A (ENSPTRG00000019607) SMIM30 (ENSPTRG00000051687) ENSPTRG00000048811 BMT2 (ENSPTRG00000044767) TMEM168 (ENSPTRG00000019604) LSMEM1 (ENSPTRG00000019603) IFRD1 (ENSPTRG00000019601) ZNF277 (ENSPTRG00000024152) DOCK4 (ENSPTRG00000019598) LRRN3 (ENSPTRG00000028417) IMMP2L (ENSPTRG00000019594) ENSPTRG00000047546 #22 DNAJB9 (ENSPTRG00000019593) THAP5 (ENSPTRG00000019592) PNPLA8 (ENSPTRG00000019590) ENSPTRG00000044874 NRCAM (ENSPTRG00000019589) LAMB4 (ENSPTRG00000019588) LAMB1 (ENSPTRG00000019587) DLD (ENSPTRG00000019585) SLC26A3 (ENSPTRG00000022537) CBLL1 (ENSPTRG00000019583) SLC26A4 (ENSPTRG00000019581) BCAP29 (ENSPTRG00000019580) DUS4L (ENSPTRG00000019579) GPR22 (ENSPTRG00000028426) COG5 (ENSPTRG00000019577) Chimpanzee MODERN SPECIES 594 ENSPTRG00000052746 #22 ENSPTRG00000045196 ENSPTRG00000047287 ENSPTRG00000048977 ENSPTRG00000051601 Bonobo MODERN SPECIES 20 ENSPPAG00000004955 ENSPPAG00000027647 FOXP2 (ENSPPAG00000030868) PPP1R3A (ENSPPAG00000041499) SMIM30 (ENSPPAG00000019976) ENSPPAG00000039584 BMT2 (ENSPPAG00000031398) TMEM168 (ENSPPAG00000042305) LSMEM1 (ENSPPAG00000020364) IFRD1 (ENSPPAG00000042969) ZNF277 (ENSPPAG00000029852) DOCK4 (ENSPPAG00000040634) ENSPPAG00000028203 LRRN3 (ENSPPAG00000010425) ENSPPAG00000035378 ENSPPAG00000039101 #22 DNAJB9 (ENSPPAG00000031489) THAP5 (ENSPPAG00000043232) ENSPPAG00000004251 PNPLA8 (ENSPPAG00000029848) NRCAM (ENSPPAG00000035215) LAMB4 (ENSPPAG00000038537) LAMB1 (ENSPPAG00000028669) DLD (ENSPPAG00000034095) SLC26A3 (ENSPPAG00000019561) CBLL1 (ENSPPAG00000039435) SLC26A4 (ENSPPAG00000034905) ENSPPAG00000043021 DUS4L (ENSPPAG00000031482) GPR22 (ENSPPAG00000003684) COG5 (ENSPPAG00000034477) Gorilla MODERN SPECIES 20 TES (ENSGGOG00000016067) TFEC (ENSGGOG00000009901) ENSGGOG00000042671 FOXP2 (ENSGGOG00000027435) PPP1R3A (ENSGGOG00000005621) SMIM30 (ENSGGOG00000003081) ENSGGOG00000042174 BMT2 (ENSGGOG00000027197) TMEM168 (ENSGGOG00000017194) LSMEM1 (ENSGGOG00000016165) IFRD1 (ENSGGOG00000000718) ZNF277 (ENSGGOG00000005587) DOCK4 (ENSGGOG00000004313) LRRN3 (ENSGGOG00000026541) ENSGGOG00000043490 ENSGGOG00000037528 #22 DNAJB9 (ENSGGOG00000010754) ENSGGOG00000041229 PNPLA8 (ENSGGOG00000010179) ENSGGOG00000039809 NRCAM (ENSGGOG00000012271) LAMB4 (ENSGGOG00000016757) LAMB1 (ENSGGOG00000010725) DLD (ENSGGOG00000002567) SLC26A3 (ENSGGOG00000006523) CBLL1 (ENSGGOG00000004921) SLC26A4 (ENSGGOG00000034830) ENSGGOG00000016205 DUS4L (ENSGGOG00000003821) GPR22 (ENSGGOG00000024246) COG5 (ENSGGOG00000043482) Gibbon MODERN SPECIES 3 ENSNLEG00000033212 FOXP2 (ENSNLEG00000011394) PPP1R3A (ENSNLEG00000011388) SMIM30 (ENSNLEG00000030553) ENSNLEG00000032204 ENSNLEG00000034107 BMT2 (ENSNLEG00000011360) TMEM168 (ENSNLEG00000011346) LSMEM1 (ENSNLEG00000011338) IFRD1 (ENSNLEG00000011280) ZNF277 (ENSNLEG00000011240) DOCK4 (ENSNLEG00000011076) LRRN3 (ENSNLEG00000018600) IMMP2L (ENSNLEG00000011071) ENSNLEG00000035270 ENSNLEG00000033818 #22 DNAJB9 (ENSNLEG00000008287) THAP5 (ENSNLEG00000035889) ENSNLEG00000008309 PNPLA8 (ENSNLEG00000008297) ENSNLEG00000035557 NRCAM (ENSNLEG00000008311) LAMB4 (ENSNLEG00000008405) LAMB1 (ENSNLEG00000008501) DLD (ENSNLEG00000008579) SLC26A3 (ENSNLEG00000008644) ENSNLEG00000008660 SLC26A4 (ENSNLEG00000008663) ENSNLEG00000008699 DUS4L (ENSNLEG00000008716) COG5 (ENSNLEG00000008738) Cercopithecidae DUPLICATION Cercopithecidae DUPLICATION Cercopithecidae ANCESTRAL SPECIES 15 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00910000148049 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.i.a #22 ENSGT00950000183001.a.a #23 ENSGT00910000147603 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00910000147026 ENSGT00500000045038.y.a.a ENSGT00390000012491 #36 Rhinopithecus ANCESTRAL SPECIES 34 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00390000017384.h #16 ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00910000148049 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.i.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00910000147026 ENSGT00500000045038.y.a.a ENSGT00390000012491 #36 ENSGT00950000182987.c.a.a.w Black snub-nosed monkey MODERN SPECIES 1932 C10orf120 (ENSRBIG00000038826) #11 CUZD1 (ENSRBIG00000037616) #14 ENSRBIG00000041773 #16 FAM24A (ENSRBIG00000032405) C10orf88 (ENSRBIG00000032338) #16 PSTK (ENSRBIG00000027947) #17 IKZF5 (ENSRBIG00000043135) #18 ACADSB (ENSRBIG00000037718) #19 HMX3 (ENSRBIG00000044171) #20 HMX2 (ENSRBIG00000042456) #21 ENSRBIG00000029979 #22 GPR26 (ENSRBIG00000014711) #23 CPXM2 (ENSRBIG00000028836) #24 CHST15 (ENSRBIG00000042844) #25 OAT (ENSRBIG00000020634) #26 NKX1-2 (ENSRBIG00000035041) #27 LHPP (ENSRBIG00000029121) #28 FAM53B (ENSRBIG00000035026) #29 EEF1AKMT2 (ENSRBIG00000032554) #31 ABRAXAS2 (ENSRBIG00000039178) #32 ENSRBIG00000028822 ZRANB1 (ENSRBIG00000012257) #34 CTBP2 (ENSRBIG00000041430) #35 ENSRBIG00000029543 ENSRBIG00000028389 TEX36 (ENSRBIG00000033525) #36 Golden snub-nosed monkey MODERN SPECIES 813 BTBD16 (ENSRROG00000039453) #7 PLEKHA1 (ENSRROG00000034004) #9 HTRA1 (ENSRROG00000039096) #10 DMBT1 (ENSRROG00000037950) #13 C10orf120 (ENSRROG00000040542) #11 CUZD1 (ENSRROG00000034208) #14 FAM24B (ENSRROG00000044993) FAM24A (ENSRROG00000025149) C10orf88 (ENSRROG00000026348) #16 ENSRROG00000042113 PSTK (ENSRROG00000010210) #17 IKZF5 (ENSRROG00000023471) #18 ACADSB (ENSRROG00000042969) #19 HMX3 (ENSRROG00000039758) #20 HMX2 (ENSRROG00000038682) #21 ENSRROG00000043912 #22 GPR26 (ENSRROG00000034092) #23 CPXM2 (ENSRROG00000034798) #24 CHST15 (ENSRROG00000036235) #25 OAT (ENSRROG00000031943) #26 NKX1-2 (ENSRROG00000040338) #27 LHPP (ENSRROG00000042763) #28 FAM53B (ENSRROG00000038434) #29 EEF1AKMT2 (ENSRROG00000044657) #31 ABRAXAS2 (ENSRROG00000041463) #32 ZRANB1 (ENSRROG00000039732) #34 ENSRROG00000012768 CTBP2 (ENSRROG00000041660) #35 ENSRROG00000028949 ENSRROG00000031792 TEX36 (ENSRROG00000037669) #36 Cercopithecinae ANCESTRAL SPECIES 15 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00910000148049 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.i.a #22 ENSGT00950000183001.a.a #23 ENSGT00910000147603 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00910000147026 ENSGT00500000045038.y.a.a ENSGT00390000012491 #36 Cercopithecinae_a ANCESTRAL SPECIES 14 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00910000148049 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.i.a #22 ENSGT00950000183001.a.a #23 ENSGT00910000147603 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00910000147026 ENSGT00500000045038.y.a.a ENSGT00390000012491 #36 Macaca ANCESTRAL SPECIES 11 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00910000148049 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.i.a #22 ENSGT00950000183001.a.a #23 ENSGT00910000147603 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00910000147026 ENSGT00500000045038.y.a.a ENSGT00390000012491 #36 Macaca_a ANCESTRAL SPECIES 13 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00910000148049 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.i.a #22 ENSGT00950000183001.a.a #23 ENSGT00910000147603 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d Rhesus MODERN SPECIES 19 BTBD16 (ENSMMUG00000013038) #7 PLEKHA1 (ENSMMUG00000013040) #9 HTRA1 (ENSMMUG00000056637) #10 ENSMMUG00000065343 #13 ENSMMUG00000021138 #13 SPADH (ENSMMUG00000052634) C9H10orf120 (ENSMMUG00000021140) #11 CUZD1 (ENSMMUG00000010458) #14 FAM24A (ENSMMUG00000057705) C9H10orf88 (ENSMMUG00000008564) #16 PSTK (ENSMMUG00000017858) #17 IKZF5 (ENSMMUG00000023480) #18 ACADSB (ENSMMUG00000000684) #19 HMX3 (ENSMMUG00000003090) #20 HMX2 (ENSMMUG00000053104) #21 BUB3 (ENSMMUG00000003092) #22 GPR26 (ENSMMUG00000053995) #23 CPXM2 (ENSMMUG00000020346) #24 ENSMMUG00000056443 ENSMMUG00000046183 CHST15 (ENSMMUG00000010115) #25 OAT (ENSMMUG00000010485) #26 NKX1-2 (ENSMMUG00000054006) #27 LHPP (ENSMMUG00000015215) #28 FAM53B (ENSMMUG00000015216) #29 EEF1AKMT2 (ENSMMUG00000015217) #31 ABRAXAS2 (ENSMMUG00000012501) #32 ZRANB1 (ENSMMUG00000022028) #34 CTBP2 (ENSMMUG00000022032) #35 TEX36 (ENSMMUG00000021270) #36 EDRF1 (ENSMMUG00000008535) #37 Crab-eating macaque MODERN SPECIES 19 ENSMFAG00000062863 DMBT1 (ENSMFAG00000003903) #13 SPADH (ENSMFAG00000049536) C10orf120 (ENSMFAG00000041530) #11 ENSMFAG00000046495 CUZD1 (ENSMFAG00000033660) #14 FAM24B (ENSMFAG00000061971) FAM24A (ENSMFAG00000060945) C10orf88 (ENSMFAG00000062466) #16 ENSMFAG00000061411 ENSMFAG00000064549 PSTK (ENSMFAG00000036565) #17 IKZF5 (ENSMFAG00000046268) #18 ACADSB (ENSMFAG00000034302) #19 ENSMFAG00000041320 #21 BUB3 (ENSMFAG00000044849) #22 ENSMFAG00000053162 GPR26 (ENSMFAG00000056569) #23 CPXM2 (ENSMFAG00000002567) #24 ENSMFAG00000049060 CHST15 (ENSMFAG00000032966) #25 ENSMFAG00000038400 #26 NKX1-2 (ENSMFAG00000061403) #27 LHPP (ENSMFAG00000039017) #28 FAM53B (ENSMFAG00000030017) #29 ENSMFAG00000002265 #31 ABRAXAS2 (ENSMFAG00000035172) #32 ZRANB1 (ENSMFAG00000031080) #34 CTBP2 (ENSMFAG00000045892) #35 TEX36 (ENSMFAG00000000897) #36 EDRF1 (ENSMFAG00000003945) #37 Pig-tailed macaque MODERN SPECIES 92 PLEKHA1 (ENSMNEG00000042304) #9 ARMS2 (ENSMNEG00000037085) HTRA1 (ENSMNEG00000039398) #10 ENSMNEG00000035126 #13 C10orf120 (ENSMNEG00000032555) #11 CUZD1 (ENSMNEG00000033847) #14 FAM24B (ENSMNEG00000032458) FAM24A (ENSMNEG00000039220) C10orf88 (ENSMNEG00000033455) #16 ENSMNEG00000032659 PSTK (ENSMNEG00000029291) #17 IKZF5 (ENSMNEG00000036978) #18 ACADSB (ENSMNEG00000031260) #19 HMX3 (ENSMNEG00000043084) #20 HMX2 (ENSMNEG00000028435) #21 ENSMNEG00000000049 #22 GPR26 (ENSMNEG00000032420) #23 ENSMNEG00000012185 CPXM2 (ENSMNEG00000042070) #24 CHST15 (ENSMNEG00000036317) #25 OAT (ENSMNEG00000044251) #26 NKX1-2 (ENSMNEG00000036634) #27 LHPP (ENSMNEG00000028552) #28 FAM53B (ENSMNEG00000044479) #29 ENSMNEG00000024668 EEF1AKMT2 (ENSMNEG00000029600) #31 ABRAXAS2 (ENSMNEG00000040445) #32 ZRANB1 (ENSMNEG00000030081) #34 CTBP2 (ENSMNEG00000043278) #35 ENSMNEG00000020291 ENSMNEG00000045518 Cercopithecinae_b ANCESTRAL SPECIES 14 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00650000095054 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.i.a #22 ENSGT00950000183001.a.a #23 ENSGT00910000147603 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00910000147026 ENSGT00500000045038.y.a.a ENSGT00390000012491 #36 Olive baboon MODERN SPECIES 2 BTBD16 (ENSPANG00000020479) #7 PLEKHA1 (ENSPANG00000020481) #9 HTRA1 (ENSPANG00000020482) #10 ENSPANG00000020483 #13 ENSPANG00000037364 SPADH (ENSPANG00000044363) C10orf120 (ENSPANG00000046689) #11 CUZD1 (ENSPANG00000020487) #14 FAM24A (ENSPANG00000020495) C10orf88 (ENSPANG00000020468) #16 PSTK (ENSPANG00000020470) #17 IKZF5 (ENSPANG00000020471) #18 ACADSB (ENSPANG00000020466) #19 HMX3 (ENSPANG00000046945) #20 HMX2 (ENSPANG00000043894) #21 ENSPANG00000020351 #22 GPR26 (ENSPANG00000020352) #23 CPXM2 (ENSPANG00000020354) #24 ENSPANG00000039743 CHST15 (ENSPANG00000020324) #25 ENSPANG00000041423 OAT (ENSPANG00000020327) #26 NKX1-2 (ENSPANG00000020330) #27 LHPP (ENSPANG00000020332) #28 FAM53B (ENSPANG00000045793) #29 EEF1AKMT2 (ENSPANG00000020335) #31 ABRAXAS2 (ENSPANG00000020336) #32 ENSPANG00000037231 ZRANB1 (ENSPANG00000020320) #34 CTBP2 (ENSPANG00000020276) #35 ENSPANG00000040973 Cercopithecinae_d ANCESTRAL SPECIES 64 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00650000095054 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000154525.b.a #14 ENSGT00940000163005.d ENSGT00940000163005.c ENSGT00390000017384.g #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.i.a #22 ENSGT00950000183001.a.a #23 ENSGT00910000147603 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895.w #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.f #35 ENSGT00910000147026 ENSGT00500000045038.y.a.a ENSGT00390000012491 #36 Drill MODERN SPECIES 940 C10orf120 (ENSMLEG00000005272) #11 CUZD1 (ENSMLEG00000037045) #14 FAM24B (ENSMLEG00000036212) FAM24A (ENSMLEG00000035854) C10orf88 (ENSMLEG00000035517) #16 PSTK (ENSMLEG00000038765) #17 IKZF5 (ENSMLEG00000003315) #18 ACADSB (ENSMLEG00000040722) #19 HMX3 (ENSMLEG00000024699) #20 HMX2 (ENSMLEG00000012105) #21 ENSMLEG00000031080 #22 GPR26 (ENSMLEG00000038180) #23 ENSMLEG00000022267 CPXM2 (ENSMLEG00000033633) #24 CHST15 (ENSMLEG00000036608) #25 OAT (ENSMLEG00000032966) #26 NKX1-2 (ENSMLEG00000032679) #27 LHPP (ENSMLEG00000027663) #28 FAM53B (ENSMLEG00000035214) #29 EEF1AKMT2 (ENSMLEG00000036372) #31 ABRAXAS2 (ENSMLEG00000008136) #32 ZRANB1 (ENSMLEG00000039002) #34 CTBP2 (ENSMLEG00000044401) #35 ENSMLEG00000007460 ENSMLEG00000002979 TEX36 (ENSMLEG00000027814) #36 Sooty mangabey MODERN SPECIES 527 BTBD16 (ENSCATG00000012464) #7 PLEKHA1 (ENSCATG00000005094) #9 ARMS2 (ENSCATG00000026311) HTRA1 (ENSCATG00000038268) #10 DMBT1 (ENSCATG00000044187) #13 C10orf120 (ENSCATG00000033658) #11 ENSCATG00000036116 FAM24B (ENSCATG00000043992) FAM24A (ENSCATG00000037982) C10orf88 (ENSCATG00000038112) #16 PSTK (ENSCATG00000038639) #17 IKZF5 (ENSCATG00000035777) #18 ACADSB (ENSCATG00000035743) #19 HMX3 (ENSCATG00000037673) #20 HMX2 (ENSCATG00000017605) #21 ENSCATG00000045202 #22 ENSCATG00000012261 GPR26 (ENSCATG00000033714) #23 ENSCATG00000008393 CPXM2 (ENSCATG00000023297) #24 CHST15 (ENSCATG00000035207) #25 OAT (ENSCATG00000044088) #26 NKX1-2 (ENSCATG00000044548) #27 LHPP (ENSCATG00000045044) #28 FAM53B (ENSCATG00000038702) #29 EEF1AKMT2 (ENSCATG00000030673) #31 ABRAXAS2 (ENSCATG00000014044) #32 ZRANB1 (ENSCATG00000035796) #34 CTBP2 (ENSCATG00000043867) #35 ENSCATG00000029412 ENSCATG00000033653 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000183091.A.a.i.b #22 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000183091.A.a.i.b #22 Cercopithecinae_a ANCESTRAL SPECIES 15 ENSGT00940000153801.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000156113 ENSGT00910000147562 ENSGT00940000157532 ENSGT00390000009546.b ENSGT00390000001688 ENSGT00940000154824.a ENSGT00940000154968 ENSGT00950000182992.a.b.b ENSGT00940000154635.a.c ENSGT00940000162798 ENSGT00390000002200.a.b ENSGT00940000162917 ENSGT00950000183091.A.a.i.b #22 ENSGT00940000160385 ENSGT00940000159435 ENSGT00940000161270 ENSGT00940000160659 ENSGT00390000015564.qb.b ENSGT00940000157353 ENSGT00940000157414 ENSGT00940000156907 ENSGT00390000005651 ENSGT00940000159257 ENSGT00730000111180 ENSGT00950000182808.b.a ENSGT00940000154634.c.ab.i ENSGT00940000154634.c.ab.h.b ENSGT00940000162398 Macaca ANCESTRAL SPECIES 14 ENSGT00940000153801.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000156113 ENSGT00910000147562 ENSGT00940000157532 ENSGT00390000009546.b ENSGT00390000001688 ENSGT00940000154824.a ENSGT00940000154968 ENSGT00950000182992.a.b.b ENSGT00940000154635.a.c ENSGT00940000162798 ENSGT00390000002200.a.b ENSGT00940000162917 ENSGT00950000183091.A.a.i.b #22 ENSGT00940000160385 ENSGT00940000159435 ENSGT00940000161270 ENSGT00940000160659 ENSGT00390000015564.qb.b ENSGT00940000157353 ENSGT00940000157414 ENSGT00940000156907 ENSGT00390000005651 ENSGT00940000159257 ENSGT00730000111180 ENSGT00950000182808.b.a ENSGT00940000154634.c.ab.i ENSGT00910000148837 ENSGT00940000162398 Pig-tailed macaque MODERN SPECIES 544 EXOSC3 (ENSMNEG00000037084) TRMT10B (ENSMNEG00000033400) FRMPD1 (ENSMNEG00000033935) ENSMNEG00000036897 FBXO10 (ENSMNEG00000031629) POLR1E (ENSMNEG00000040283) ZBTB5 (ENSMNEG00000025214) GRHPR (ENSMNEG00000040754) CNGB3 (ENSMNEG00000039896) CPNE3 (ENSMNEG00000029944) RMDN1 (ENSMNEG00000029535) WWP1 (ENSMNEG00000034846) SLC7A13 (ENSMNEG00000036528) ATP6V0D2 (ENSMNEG00000044983) PSKH2 (ENSMNEG00000041703) ENSMNEG00000013058 #22 CA2 (ENSMNEG00000037161) CA3 (ENSMNEG00000030535) CA1 (ENSMNEG00000038997) CA13 (ENSMNEG00000031560) ENSMNEG00000029224 E2F5 (ENSMNEG00000038970) LRRCC1 (ENSMNEG00000038685) RALYL (ENSMNEG00000033288) Cercopithecinae_b ANCESTRAL SPECIES 9 ENSGT00390000007813 ENSGT00950000183108.b.a.b ENSGT00940000153801.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000156113 ENSGT00940000157532 ENSGT00390000001688 ENSGT00940000154824.a ENSGT00940000154968 ENSGT00950000182992.a.b.b ENSGT00940000154635.a.c ENSGT00940000162798 ENSGT00390000002200.a.b ENSGT00940000162917 ENSGT00950000183091.A.a.i.b #22 ENSGT00940000160385 ENSGT00940000159435 ENSGT00940000161270 ENSGT00940000160659 ENSGT00390000015564.pb ENSGT00940000157353 ENSGT00940000157414 ENSGT00940000156907 ENSGT00390000005651 ENSGT00940000159257 ENSGT00730000111180 ENSGT00950000182808.b.a ENSGT00940000154634.c.ab.h.b ENSGT00940000154634.c.ab.i ENSGT00940000162398 Olive baboon MODERN SPECIES 18 RIPK2 (ENSPANG00000015171) ENSPANG00000039820 MMP16 (ENSPANG00000010068) DCAF4L2 (ENSPANG00000011397) ENSPANG00000043218 ENSPANG00000045609 CNBD1 (ENSPANG00000034174) ENSPANG00000039124 CNGB3 (ENSPANG00000021220) CPNE3 (ENSPANG00000011828) RMDN1 (ENSPANG00000011829) WWP1 (ENSPANG00000019676) SLC7A13 (ENSPANG00000009669) ATP6V0D2 (ENSPANG00000022220) PSKH2 (ENSPANG00000008746) ENSPANG00000034225 #22 CA2 (ENSPANG00000017180) CA3 (ENSPANG00000040364) CA1 (ENSPANG00000019035) CA13 (ENSPANG00000047659) RBIS (ENSPANG00000021683) E2F5 (ENSPANG00000014637) LRRCC1 (ENSPANG00000005748) RALYL (ENSPANG00000029305) ENSPANG00000029827 SNX16 (ENSPANG00000021915) CHMP4C (ENSPANG00000021865) ZFAND1 (ENSPANG00000000979) SLC10A5 (ENSPANG00000019392) IMPA1 (ENSPANG00000015217) ENSPANG00000015930 Cercopithecinae_d ANCESTRAL SPECIES 31 ENSGT00390000007813 ENSGT00950000183108.b.a.b ENSGT00940000153801.b ENSGT00390000000521 ENSGT00390000006658.a.b ENSGT00940000156113 ENSGT00940000157532 ENSGT00390000001688 ENSGT00940000154824.a ENSGT00940000154968 ENSGT00950000182992.a.b.b ENSGT00940000154635.a.c ENSGT00940000162798 ENSGT00390000002200.a.b ENSGT00940000162917 ENSGT00950000183091.A.a.i.b #22 ENSGT00940000160385 ENSGT00940000159435 ENSGT00940000161270 ENSGT00940000160659 ENSGT00390000015564.pb ENSGT00940000157353 ENSGT00940000157414 ENSGT00940000156907 ENSGT00390000005651 ENSGT00940000159257 ENSGT00730000111180 ENSGT00950000182808.b.a ENSGT00940000154634.c.ab.i ENSGT00940000162398 ENSGT00940000160340.c Sooty mangabey MODERN SPECIES 397 CALB1 (ENSCATG00000041675) DECR1 (ENSCATG00000029838) NBN (ENSCATG00000033051) OSGIN2 (ENSCATG00000036811) RIPK2 (ENSCATG00000042899) ENSCATG00000034840 MMP16 (ENSCATG00000039014) CNBD1 (ENSCATG00000034178) CNGB3 (ENSCATG00000030165) CPNE3 (ENSCATG00000038568) RMDN1 (ENSCATG00000015442) WWP1 (ENSCATG00000031449) SLC7A13 (ENSCATG00000041991) ATP6V0D2 (ENSCATG00000032520) PSKH2 (ENSCATG00000035667) ENSCATG00000037505 #22 CA2 (ENSCATG00000031921) CA3 (ENSCATG00000035345) CA1 (ENSCATG00000044678) CA13 (ENSCATG00000044249) RBIS (ENSCATG00000028244) E2F5 (ENSCATG00000032167) LRRCC1 (ENSCATG00000012957) RALYL (ENSCATG00000042145) SNX16 (ENSCATG00000036805) CHMP4C (ENSCATG00000043905) ZFAND1 (ENSCATG00000012729) SLC10A5 (ENSCATG00000020113) ENSCATG00000022716 FABP12 (ENSCATG00000036511) FABP9 (ENSCATG00000037644) Drill MODERN SPECIES 1562 ENSMLEG00000034273 CPNE3 (ENSMLEG00000035658) RMDN1 (ENSMLEG00000033500) WWP1 (ENSMLEG00000040614) SLC7A13 (ENSMLEG00000040996) ATP6V0D2 (ENSMLEG00000031783) PSKH2 (ENSMLEG00000034406) ENSMLEG00000036458 #22 Rhinopithecus ANCESTRAL SPECIES 777 ENSGT00940000162798 ENSGT00390000002200.a.b ENSGT00940000162917 ENSGT00950000183091.A.a.i.b #22 Black snub-nosed monkey MODERN SPECIES 2488 SLC7A13 (ENSRBIG00000026501) ATP6V0D2 (ENSRBIG00000041038) PSKH2 (ENSRBIG00000041048) ENSRBIG00000030400 #22 Golden snub-nosed monkey MODERN SPECIES 1850 ATP6V0D2 (ENSRROG00000039258) PSKH2 (ENSRROG00000037904) ENSRROG00000043147 #22 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000183091.A.a.j #22 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000183091.A.a.j #22 Vervet Monkey MODERN SPECIES 28 TACC2 (ENSCSAG00000004625) BTBD16 (ENSCSAG00000004617) #7 PLEKHA1 (ENSCSAG00000004609) #9 HTRA1 (ENSCSAG00000004604) #10 ENSCSAG00000004600 #13 C10orf120 (ENSCSAG00000004594) #11 CUZD1 (ENSCSAG00000004585) #14 FAM24B (ENSCSAG00000004575) FAM24A (ENSCSAG00000004571) C10orf88 (ENSCSAG00000004568) #16 PSTK (ENSCSAG00000004563) #17 IKZF5 (ENSCSAG00000004558) #18 ACADSB (ENSCSAG00000004557) #19 HMX3 (ENSCSAG00000004552) #20 HMX2 (ENSCSAG00000004550) #21 BUB3 (ENSCSAG00000004547) #22 GPR26 (ENSCSAG00000004541) #23 CPXM2 (ENSCSAG00000004539) #24 CHST15 (ENSCSAG00000004534) #25 OAT (ENSCSAG00000004531) #26 NKX1-2 (ENSCSAG00000004528) #27 LHPP (ENSCSAG00000004526) #28 FAM53B (ENSCSAG00000004523) #29 EEF1AKMT2 (ENSCSAG00000004519) #31 ABRAXAS2 (ENSCSAG00000004517) #32 ZRANB1 (ENSCSAG00000004507) #34 ENSCSAG00000004503 #35 TEX36 (ENSCSAG00000004500) #36 EDRF1 (ENSCSAG00000004498) #37 MMP21 (ENSCSAG00000004494) UROS (ENSCSAG00000004491) Tarsier DUPLICATION Tarsier DUPLICATION Tarsier DUPLICATION Tarsier MODERN SPECIES 1508 CUNH10orf88 (ENSTSYG00000010949) #16 PSTK (ENSTSYG00000003369) #17 IKZF5 (ENSTSYG00000025749) #18 ACADSB (ENSTSYG00000013773) #19 ENSTSYG00000029811 #20 HMX2 (ENSTSYG00000013450) #21 BUB3 (ENSTSYG00000013444) #22 S100A6 (ENSTSYG00000029525) S100A5 (ENSTSYG00000002003) S100A4 (ENSTSYG00000030470) S100A3 (ENSTSYG00000036785) S100A2 (ENSTSYG00000027906) Tarsier MODERN SPECIES 6029 C8orf48 (ENSTSYG00000014003) ENSTSYG00000033471 #22 DLC1 (ENSTSYG00000013817) KIAA1456 (ENSTSYG00000029308) Tarsier MODERN SPECIES 6252 ENSTSYG00000036829 #22 Tarsier MODERN SPECIES 5420 ENSTSYG00000028760 #22 Laurasiatheria ANCESTRAL SPECIES 14 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT01010000224541 ENSGT00940000162108.tb ENSGT00940000162108.sb.a ENSGT00940000162108.sb.b ENSGT00940000165716 ENSGT00940000154525.b.a #14 ENSGT00940000163005 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183091.A.a #22 Common shrew MODERN SPECIES 11735 BUB3 (ENSSARG00000000919) #22 Laurasiatheria_a ANCESTRAL SPECIES 15 ENSGT00390000005511 #11 ENSGT01010000224541 ENSGT00940000162108.tb ENSGT00940000162108.sb.a ENSGT00940000162108.sb.b ENSGT00940000165716 ENSGT00940000154525.b.a #14 ENSGT00940000163005.b ENSGT00940000163005.a ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Artiodactyla ANCESTRAL SPECIES 14 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112.c ENSGT00390000012112.d ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000163005.b ENSGT00940000163005.a ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Suina ANCESTRAL SPECIES 6 ENSGT00950000183145.E #13 ENSGT00390000012112.c.f ENSGT00390000012112.d ENSGT00390000012112.c.e.a ENSGT00390000012112.c.e.b ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000163005.b ENSGT00940000163005.a ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399.e #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Chacoan peccary MODERN SPECIES 955 PLEKHA1 (ENSCWAG00000010671) #9 HTRA1 (ENSCWAG00000010613) #10 ENSCWAG00000010416 ENSCWAG00000010366 ENSCWAG00000010277 ENSCWAG00000009916 C10orf120 (ENSCWAG00000009823) #11 ENSCWAG00000009129 #13 ENSCWAG00000009087 C10orf88 (ENSCWAG00000018230) #16 PSTK (ENSCWAG00000018180) #17 IKZF5 (ENSCWAG00000018145) #18 ACADSB (ENSCWAG00000018050) #19 HMX3 (ENSCWAG00000018030) #20 HMX2 (ENSCWAG00000018003) #21 BUB3 (ENSCWAG00000017831) #22 CPXM2 (ENSCWAG00000017772) #24 CHST15 (ENSCWAG00000017720) #25 OAT (ENSCWAG00000017679) #26 NKX1-2 (ENSCWAG00000017640) #27 LHPP (ENSCWAG00000017585) #28 FAM53B (ENSCWAG00000017561) #29 ENSCWAG00000017539 #31 ENSCWAG00000017360 #32 ZRANB1 (ENSCWAG00000017307) #34 CTBP2 (ENSCWAG00000017203) #35 TEX36 (ENSCWAG00000017160) #36 EDRF1 (ENSCWAG00000017083) #37 UROS (ENSCWAG00000017033) BCCIP (ENSCWAG00000017003) DHX32 (ENSCWAG00000016967) Pig MODERN SPECIES 5 PSP-II (ENSSSCG00000061335) PSP-I (ENSSSCG00000002978) SPMI (ENSSSCG00000002977) C14H10orf120 (ENSSSCG00000010717) #11 ENSSSCG00000010718 ENSSSCG00000049267 ENSSSCG00000051569 ENSSSCG00000010719 #16 ENSSSCG00000058782 ENSSSCG00000023865 #16 PSTK (ENSSSCG00000010721) #17 IKZF5 (ENSSSCG00000023565) #18 ACADSB (ENSSSCG00000010723) #19 HMX3 (ENSSSCG00000010724) #20 HMX2 (ENSSSCG00000010725) #21 BUB3 (ENSSSCG00000010726) #22 GPR26 (ENSSSCG00000010727) #23 CPXM2 (ENSSSCG00000010728) #24 ENSSSCG00000042079 CHST15 (ENSSSCG00000029482) #25 ENSSSCG00000010734 #26 NKX1-2 (ENSSSCG00000010733) #27 LHPP (ENSSSCG00000010735) #28 FAM53B (ENSSSCG00000010732) #29 EEF1AKMT2 (ENSSSCG00000056519) #31 ABRAXAS2 (ENSSSCG00000010737) #32 ZRANB1 (ENSSSCG00000010738) #34 CTBP2 (ENSSSCG00000010739) #35 ENSSSCG00000045428 TEX36 (ENSSSCG00000032832) #36 EDRF1 (ENSSSCG00000010741) #37 Artiodactyla_a ANCESTRAL SPECIES 14 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112.c ENSGT00390000012112.d ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000163005.b ENSGT00940000163005.a ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Camelidae ANCESTRAL SPECIES 86 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Arabian camel MODERN SPECIES 2 ENSCDRG00005008442 ENSCDRG00005008386 ENSCDRG00005008358 C10orf120 (ENSCDRG00005008312) #11 ENSCDRG00005007985 ENSCDRG00005007808 ENSCDRG00005007759 ENSCDRG00005007717 ENSCDRG00005007572 #16 ENSCDRG00005007518 #16 PSTK (ENSCDRG00005007484) #17 IKZF5 (ENSCDRG00005007437) #18 ACADSB (ENSCDRG00005007354) #19 HMX3 (ENSCDRG00005007324) #20 HMX2 (ENSCDRG00005007291) #21 BUB3 (ENSCDRG00005007065) #22 GPR26 (ENSCDRG00005006985) #23 CPXM2 (ENSCDRG00005006920) #24 CHST15 (ENSCDRG00005006860) #25 OAT (ENSCDRG00005006770) #26 NKX1-2 (ENSCDRG00005006736) #27 LHPP (ENSCDRG00005006641) #28 FAM53B (ENSCDRG00005006593) #29 EEF1AKMT2 (ENSCDRG00005007107) #31 ABRAXAS2 (ENSCDRG00005007040) #32 ZRANB1 (ENSCDRG00005006967) #34 CTBP2 (ENSCDRG00005006779) #35 TEX36 (ENSCDRG00005006718) #36 EDRF1 (ENSCDRG00005006537) #37 UROS (ENSCDRG00005006451) BCCIP (ENSCDRG00005006346) Alpaca MODERN SPECIES 2274 PSTK (ENSVPAG00000004085) #17 IKZF5 (ENSVPAG00000004086) #18 ACADSB (ENSVPAG00000004088) #19 BUB3 (ENSVPAG00000004089) #22 Artiodactyla_b ANCESTRAL SPECIES 13 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112.c ENSGT00390000012112.d ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000163005.b ENSGT00940000163005.a ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Cetacea ANCESTRAL SPECIES 15 ENSGT00390000004068 ENSGT00940000155447 ENSGT00500000044926 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00940000154277.a.b.b.m.a.b ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 Odontoceti ANCESTRAL SPECIES 14 ENSGT00390000004068 ENSGT00940000155447 ENSGT00500000044926 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00390000005104.j.b ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00390000006865.j.b ENSGT00940000154277.a.b.b.m.a.b ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 Odontoceti_a ANCESTRAL SPECIES 11 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000163005.b ENSGT00390000017384.fb.b #16 ENSGT00940000163005.a ENSGT00390000017384.fb.a #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00390000005104.j.b ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00390000006865.j.b ENSGT00940000154277.a.b.b.m.a.b ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 Odontoceti_b ANCESTRAL SPECIES 14 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000163005.b ENSGT00390000017384.fb.b #16 ENSGT00940000163005.a ENSGT00390000017384.fb.a #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00390000005104.j.b ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00390000006865.j.b ENSGT00940000154277.a.b.b.m.a.b ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.g.b #35 ENSGT00940000154430.h #35 Monodontidae ANCESTRAL SPECIES 14 ENSGT00500000044926 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00390000017384.gb #16 ENSGT00390000017384.fb.a #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00390000005104.j.b ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00390000006865.j.b ENSGT00940000154277.a.b.b.m.a.b ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.g.b #35 ENSGT00940000154430.h #35 Beluga whale MODERN SPECIES 65 ATE1 (ENSDLEG00000007967) NSMCE4A (ENSDLEG00000007929) ENSDLEG00000019858 ENSDLEG00000019841 BTBD16 (ENSDLEG00000019832) #7 PLEKHA1 (ENSDLEG00000019819) #9 HTRA1 (ENSDLEG00000019813) #10 CUNH10orf120 (ENSDLEG00000019804) #11 ENSDLEG00000019800 #16 ENSDLEG00000019795 #16 PSTK (ENSDLEG00000019793) #17 IKZF5 (ENSDLEG00000019789) #18 ACADSB (ENSDLEG00000019783) #19 HMX3 (ENSDLEG00000019778) #20 HMX2 (ENSDLEG00000019773) #21 BUB3 (ENSDLEG00000019765) #22 ENSDLEG00000019762 GPR26 (ENSDLEG00000019758) #23 CPXM2 (ENSDLEG00000019749) #24 CHST15 (ENSDLEG00000019744) #25 ENSDLEG00000019741 ENSDLEG00000019738 OAT (ENSDLEG00000019701) #26 NKX1-2 (ENSDLEG00000019691) #27 LHPP (ENSDLEG00000019685) #28 FAM53B (ENSDLEG00000019682) #29 ENSDLEG00000019676 #31 ABRAXAS2 (ENSDLEG00000019673) #32 ENSDLEG00000019671 ZRANB1 (ENSDLEG00000019649) #34 CTBP2 (ENSDLEG00000019641) #35 Narwhal MODERN SPECIES 311 ATE1 (ENSMMNG00015020901) NSMCE4A (ENSMMNG00015020951) ENSMMNG00015021035 BTBD16 (ENSMMNG00015021175) #7 PLEKHA1 (ENSMMNG00015021236) #9 HTRA1 (ENSMMNG00015021277) #10 ENSMMNG00015021290 #13 C10orf120 (ENSMMNG00015021309) #11 ENSMMNG00015021326 ENSMMNG00015021338 PSTK (ENSMMNG00015021353) #17 IKZF5 (ENSMMNG00015021364) #18 ACADSB (ENSMMNG00015021378) #19 HMX3 (ENSMMNG00015021392) #20 HMX2 (ENSMMNG00015021402) #21 BUB3 (ENSMMNG00015021424) #22 ENSMMNG00015021458 GPR26 (ENSMMNG00015021467) #23 CPXM2 (ENSMMNG00015021491) #24 CHST15 (ENSMMNG00015021516) #25 ENSMMNG00015021529 ENSMMNG00015021538 OAT (ENSMMNG00015021545) #26 NKX1-2 (ENSMMNG00015021558) #27 LHPP (ENSMMNG00015021572) #28 FAM53B (ENSMMNG00015021592) #29 EEF1AKMT2 (ENSMMNG00015021603) #31 ABRAXAS2 (ENSMMNG00015021615) #32 ZRANB1 (ENSMMNG00015021633) #34 ENSMMNG00015021648 CTBP2 (ENSMMNG00015021659) #35 Vaquita MODERN SPECIES 7 ENSPSNG00000022440 BTBD16 (ENSPSNG00000022446) #7 PLEKHA1 (ENSPSNG00000022463) #9 HTRA1 (ENSPSNG00000022472) #10 ENSPSNG00000022481 #13 ENSPSNG00000022486 #13 C10orf120 (ENSPSNG00000022490) #11 ENSPSNG00000022493 ENSPSNG00000022495 #16 ENSPSNG00000022497 ENSPSNG00000022499 #16 PSTK (ENSPSNG00000022505) #17 IKZF5 (ENSPSNG00000022509) #18 ACADSB (ENSPSNG00000022512) #19 HMX3 (ENSPSNG00000022517) #20 BUB3 (ENSPSNG00000022526) #22 ENSPSNG00000004804 GPR26 (ENSPSNG00000004875) #23 CPXM2 (ENSPSNG00000004901) #24 CHST15 (ENSPSNG00000004925) #25 ENSPSNG00000004944 OAT (ENSPSNG00000004965) #26 NKX1-2 (ENSPSNG00000004996) #27 LHPP (ENSPSNG00000005018) #28 FAM53B (ENSPSNG00000005072) #29 EEF1AKMT2 (ENSPSNG00000005092) #31 ABRAXAS2 (ENSPSNG00000005107) #32 ZRANB1 (ENSPSNG00000005126) #34 ENSPSNG00000005152 CTBP2 (ENSPSNG00000005179) #35 TEX36 (ENSPSNG00000005233) #36 Dolphin MODERN SPECIES 2520 ACADSB (ENSTTRG00000016190) #19 HMX3 (ENSTTRG00000016192) #20 HMX2 (ENSTTRG00000016193) #21 BUB3 (ENSTTRG00000016194) #22 Sperm whale MODERN SPECIES 12 WDR11 (ENSPCTG00005022064) FGFR2 (ENSPCTG00005022152) ATE1 (ENSPCTG00005022336) ENSPCTG00005022356 PLEKHA1 (ENSPCTG00005022364) #9 ENSPCTG00005022367 #10 ENSPCTG00005022368 #13 C10orf120 (ENSPCTG00005022369) #11 ENSPCTG00005022370 #16 ENSPCTG00005004457 #16 PSTK (ENSPCTG00005004477) #17 IKZF5 (ENSPCTG00005004486) #18 ACADSB (ENSPCTG00005004501) #19 HMX3 (ENSPCTG00005004538) #20 HMX2 (ENSPCTG00005004556) #21 BUB3 (ENSPCTG00005004599) #22 ENSPCTG00005004662 GPR26 (ENSPCTG00005004687) #23 CPXM2 (ENSPCTG00005004720) #24 CHST15 (ENSPCTG00005004768) #25 ENSPCTG00005004794 FAM53B (ENSPCTG00005004807) #29 EEF1AKMT2 (ENSPCTG00005004829) #31 ABRAXAS2 (ENSPCTG00005004863) #32 ZRANB1 (ENSPCTG00005004892) #34 CTBP2 (ENSPCTG00005004973) #35 TEX36 (ENSPCTG00005005162) #36 EDRF1 (ENSPCTG00005005201) #37 UROS (ENSPCTG00005005361) BCCIP (ENSPCTG00005005607) DHX32 (ENSPCTG00005005668) Blue whale MODERN SPECIES 7 BTBD16 (ENSBMSG00010015231) #7 PLEKHA1 (ENSBMSG00010015154) #9 HTRA1 (ENSBMSG00010015062) #10 C10orf120 (ENSBMSG00010015033) #11 ENSBMSG00010014864 #13 ENSBMSG00010014827 ENSBMSG00010014809 ENSBMSG00010014794 #16 ENSBMSG00010014768 ENSBMSG00010014749 #16 PSTK (ENSBMSG00010014723) #17 IKZF5 (ENSBMSG00010014703) #18 ENSBMSG00010014664 #19 HMX3 (ENSBMSG00010014645) #20 HMX2 (ENSBMSG00010014617) #21 BUB3 (ENSBMSG00010014520) #22 ENSBMSG00010014482 GPR26 (ENSBMSG00010014443) #23 CPXM2 (ENSBMSG00010014404) #24 CHST15 (ENSBMSG00010014379) #25 ENSBMSG00010014351 ENSBMSG00010014326 OAT (ENSBMSG00010014300) #26 NKX1-2 (ENSBMSG00010014273) #27 ENSBMSG00010014254 LHPP (ENSBMSG00010014228) #28 FAM53B (ENSBMSG00010014196) #29 EEF1AKMT2 (ENSBMSG00010014167) #31 ABRAXAS2 (ENSBMSG00010014139) #32 ZRANB1 (ENSBMSG00010014072) #34 CTBP2 (ENSBMSG00010013957) #35 Pecora ANCESTRAL SPECIES 12 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112.c ENSGT00390000012112.d ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000163005.b ENSGT00940000163005.a ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Yarkand deer MODERN SPECIES 6 BTBD16 (ENSCHYG00000011865) #7 PLEKHA1 (ENSCHYG00000012229) #9 HTRA1 (ENSCHYG00000012466) #10 ENSCHYG00000012574 #13 ENSCHYG00000012694 C10orf120 (ENSCHYG00000012768) #11 ENSCHYG00000012814 ##13 ENSCHYG00000012970 ENSCHYG00000013013 #16 ENSCHYG00000013157 #16 ENSCHYG00000013211 IKZF5 (ENSCHYG00000013253) #18 ACADSB (ENSCHYG00000013318) #19 HMX3 (ENSCHYG00000013451) #20 HMX2 (ENSCHYG00000013483) #21 BUB3 (ENSCHYG00000013530) #22 GPR26 (ENSCHYG00000013748) #23 CPXM2 (ENSCHYG00000013812) #24 CHST15 (ENSCHYG00000014028) #25 OAT (ENSCHYG00000014322) #26 ENSCHYG00000014425 #27 LHPP (ENSCHYG00000014469) #28 FAM53B (ENSCHYG00000014703) #29 EEF1AKMT2 (ENSCHYG00000014822) #31 ENSCHYG00000014873 ABRAXAS2 (ENSCHYG00000014923) #32 ZRANB1 (ENSCHYG00000015039) #34 ENSCHYG00000015319 #35 TEX36 (ENSCHYG00000015522) #36 EDRF1 (ENSCHYG00000015642) #37 UROS (ENSCHYG00000016089) Percora_a ANCESTRAL SPECIES 14 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112.c ENSGT00390000012112.d.b ENSGT00390000012112.d.a ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000162108.sb.a ENSGT00940000162108.sb.b ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Siberian musk deer MODERN SPECIES 1161 HTRA1 (ENSMMSG00000013570) #10 ENSMMSG00000013536 ENSMMSG00000013503 ENSMMSG00000013463 C10orf120 (ENSMMSG00000013433) #11 ENSMMSG00000013363 ENSMMSG00000013335 ENSMMSG00000013323 #16 ENSMMSG00000013300 ENSMMSG00000013281 #16 PSTK (ENSMMSG00000013263) #17 IKZF5 (ENSMMSG00000013250) #18 ACADSB (ENSMMSG00000013226) #19 HMX3 (ENSMMSG00000013208) #20 HMX2 (ENSMMSG00000013191) #21 BUB3 (ENSMMSG00000013050) #22 GPR26 (ENSMMSG00000012996) #23 CPXM2 (ENSMMSG00000012925) #24 CHST15 (ENSMMSG00000012879) #25 OAT (ENSMMSG00000012853) #26 NKX1-2 (ENSMMSG00000012827) #27 LHPP (ENSMMSG00000012785) #28 FAM53B (ENSMMSG00000012745) #29 ENSMMSG00000012701 #31 ABRAXAS2 (ENSMMSG00000012681) #32 ENSMMSG00000012649 ZRANB1 (ENSMMSG00000012620) #34 CTBP2 (ENSMMSG00000012540) #35 TEX36 (ENSMMSG00000012502) #36 EDRF1 (ENSMMSG00000012377) #37 UROS (ENSMMSG00000012288) Bovidae ANCESTRAL SPECIES 24 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112.c ENSGT00390000012112.d.b ENSGT00390000012112.d.a ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000162108.sb.a ENSGT00940000162108.sb.b ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Caprinae ANCESTRAL SPECIES 19 ENSGT00950000183145.E #13 ENSGT00390000012112.c ENSGT00390000012112.d.b ENSGT00390000012112.d.a ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000162108.sb.a ENSGT00390000017384.x #16 ENSGT00940000163005.a ENSGT00390000017384.w #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399.i #31 ENSGT00530000063424.a.j #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Goat MODERN SPECIES 18 PLEKHA1 (ENSCHIG00000005289) #9 HTRA1 (ENSCHIG00000015305) #10 ENSCHIG00000011076 #13 ENSCHIG00000020915 ENSCHIG00000014539 ENSCHIG00000000456 C10orf120 (ENSCHIG00000016466) #11 ENSCHIG00000010921 ENSCHIG00000023064 #16 ENSCHIG00000021927 #16 PSTK (ENSCHIG00000018657) #17 IKZF5 (ENSCHIG00000025772) #18 ACADSB (ENSCHIG00000024606) #19 HMX3 (ENSCHIG00000010956) #20 HMX2 (ENSCHIG00000026470) #21 BUB3 (ENSCHIG00000021092) #22 GPR26 (ENSCHIG00000011580) #23 CPXM2 (ENSCHIG00000019349) #24 CHST15 (ENSCHIG00000024216) #25 ENSCHIG00000014280 #26 NKX1-2 (ENSCHIG00000009179) #27 LHPP (ENSCHIG00000016913) #28 ENSCHIG00000012818 #29 ENSCHIG00000004811 #31 ENSCHIG00000021679 #32 ZRANB1 (ENSCHIG00000023041) #34 ENSCHIG00000020240 #35 TEX36 (ENSCHIG00000011668) #36 EDRF1 (ENSCHIG00000011117) #37 UROS (ENSCHIG00000022204) ENSCHIG00000016594 Rambouillet Sheep MODERN SPECIES 14 ENSOARG00020022322 ENSOARG00020022345 C10orf120 (ENSOARG00020022395) #11 ENSOARG00020022445 ENSOARG00020022472 ENSOARG00020022490 ENSOARG00020022507 ENSOARG00020022531 #16 ENSOARG00020022621 ENSOARG00020022651 #16 PSTK (ENSOARG00020022690) #17 IKZF5 (ENSOARG00020022735) #18 ACADSB (ENSOARG00020022775) #19 HMX3 (ENSOARG00020022802) #20 HMX2 (ENSOARG00020022828) #21 BUB3 (ENSOARG00020022850) #22 ENSOARG00020022917 GPR26 (ENSOARG00020022931) #23 CPXM2 (ENSOARG00020022962) #24 CHST15 (ENSOARG00020023005) #25 OAT (ENSOARG00020023046) #26 NKX1-2 (ENSOARG00020023086) #27 LHPP (ENSOARG00020023115) #28 FAM53B (ENSOARG00020023134) #29 EEF1AKMT2 (ENSOARG00020023184) #31 ENSOARG00020023207 #32 ZRANB1 (ENSOARG00020023239) #34 CTBP2 (ENSOARG00020023317) #35 TEX36 (ENSOARG00020023414) #36 EDRF1 (ENSOARG00020023473) #37 UROS (ENSOARG00020023759) Bovinae ANCESTRAL SPECIES 22 ENSGT00390000012112.d.b ENSGT00390000012112.d.a ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000162108.sb.a ENSGT00940000162108.sb.b ENSGT00940000163005.b ENSGT00390000017384.v #16 ENSGT00940000163005.a ENSGT00390000017384.u #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 American bison MODERN SPECIES 3316 PLEKHA1 (ENSBBBG00000010672) #9 ENSBBBG00000009041 #10 ENSBBBG00000010694 ENSBBBG00000010708 ENSBBBG00000008726 C10orf120 (ENSBBBG00000001875) #11 ENSBBBG00000010993 ENSBBBG00000011033 ENSBBBG00000011038 C10orf88 (ENSBBBG00000011048) #16 PSTK (ENSBBBG00000001987) #17 IKZF5 (ENSBBBG00000011060) #18 ACADSB (ENSBBBG00000011078) #19 HMX3 (ENSBBBG00000011087) #20 HMX2 (ENSBBBG00000001996) #21 BUB3 (ENSBBBG00000002000) #22 CPXM2 (ENSBBBG00000011180) #24 CHST15 (ENSBBBG00000011197) #25 OAT (ENSBBBG00000011212) #26 LHPP (ENSBBBG00000002042) #28 FAM53B (ENSBBBG00000011239) #29 EEF1AKMT2 (ENSBBBG00000011272) #31 ABRAXAS2 (ENSBBBG00000002054) #32 ZRANB1 (ENSBBBG00000011300) #34 ENSBBBG00000011321 #35 TEX36 (ENSBBBG00000006933) #36 EDRF1 (ENSBBBG00000011381) #37 UROS (ENSBBBG00000007119) BCCIP (ENSBBBG00000011417) DHX32 (ENSBBBG00000011428) ENSBBBG00000011431 Bos ANCESTRAL SPECIES 23 ENSGT00390000012112.d.a ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000162108.sb.a ENSGT00940000162108.sb.b ENSGT00940000163005.b ENSGT00390000017384.v #16 ENSGT00940000163005.a ENSGT00390000017384.u #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000153295.a.e.a.b ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Bos_b ANCESTRAL SPECIES 23 ENSGT00390000012112.d.a ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000162108.sb.a ENSGT00940000162108.sb.b ENSGT00940000163005.b ENSGT00390000017384.v #16 ENSGT00940000163005.a ENSGT00390000017384.u #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000153295.a.e.a.b ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Cow MODERN SPECIES 18 ENSBTAG00000038684 SPADH2 (ENSBTAG00000008029) SPADH1 (ENSBTAG00000010796) C26H10orf120 (ENSBTAG00000010797) #11 ENSBTAG00000039755 ENSBTAG00000055162 ENSBTAG00000051599 ENSBTAG00000023846 #16 ENSBTAG00000023845 #16 PSTK (ENSBTAG00000014028) #17 IKZF5 (ENSBTAG00000023847) #18 ACADSB (ENSBTAG00000018041) #19 ENSBTAG00000048256 HMX3 (ENSBTAG00000001006) #20 HMX2 (ENSBTAG00000017911) #21 BUB3 (ENSBTAG00000017913) #22 GPR26 (ENSBTAG00000051105) #23 CPXM2 (ENSBTAG00000018941) #24 CHST15 (ENSBTAG00000003312) #25 OAT (ENSBTAG00000006928) #26 NKX1-2 (ENSBTAG00000020918) #27 LHPP (ENSBTAG00000010957) #28 FAM53B (ENSBTAG00000012970) #29 EEF1AKMT2 (ENSBTAG00000050151) #31 ABRAXAS2 (ENSBTAG00000023840) #32 ZRANB1 (ENSBTAG00000003395) #34 CTBP2 (ENSBTAG00000003397) #35 TEX36 (ENSBTAG00000007011) #36 EDRF1 (ENSBTAG00000009439) #37 UROS (ENSBTAG00000005791) BCCIP (ENSBTAG00000005792) Hybrid Bos Indicus MODERN SPECIES 18 ENSBIXG00005021776 #13 ENSBIXG00005021850 ENSBIXG00005021867 ENSBIXG00005021940 C10orf120 (ENSBIXG00005021964) #11 ENSBIXG00005007366 ENSBIXG00005003736 ENSBIXG00005022065 #16 ENSBIXG00005022073 ENSBIXG00005022094 #16 PSTK (ENSBIXG00005007367) #17 IKZF5 (ENSBIXG00005022167) #18 ACADSB (ENSBIXG00005003788) #19 HMX3 (ENSBIXG00005022277) #20 HMX2 (ENSBIXG00005003794) #21 BUB3 (ENSBIXG00005022455) #22 GPR26 (ENSBIXG00005022493) #23 CPXM2 (ENSBIXG00005007228) #24 CHST15 (ENSBIXG00005022629) #25 OAT (ENSBIXG00005022673) #26 NKX1-2 (ENSBIXG00005022692) #27 LHPP (ENSBIXG00005022732) #28 FAM53B (ENSBIXG00005022783) #29 EEF1AKMT2 (ENSBIXG00005022799) #31 ABRAXAS2 (ENSBIXG00005022811) #32 ENSBIXG00005022855 #34 CTBP2 (ENSBIXG00005022970) #35 TEX36 (ENSBIXG00005023048) #36 EDRF1 (ENSBIXG00005023100) #37 UROS (ENSBIXG00005003948) BCCIP (ENSBIXG00005023242) Bos_a ANCESTRAL SPECIES 17 ENSGT00390000012112.c ENSGT00390000012112.d.b ENSGT00390000012112.d.a ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000163005.b ENSGT00390000017384.v #16 ENSGT00940000163005.a ENSGT00390000017384.u #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000153295.a.e.a.b ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Domestic yak MODERN SPECIES 17 ENSBGRG00000025138 ENSBGRG00000025155 ENSBGRG00000025185 C10orf120 (ENSBGRG00000025213) #11 ENSBGRG00000025242 ENSBGRG00000025332 ENSBGRG00000025341 #16 ENSBGRG00000025366 ENSBGRG00000025376 #16 PSTK (ENSBGRG00000025390) #17 IKZF5 (ENSBGRG00000025418) #18 ACADSB (ENSBGRG00000025451) #19 ENSBGRG00000025478 HMX3 (ENSBGRG00000025490) #20 HMX2 (ENSBGRG00000025503) #21 BUB3 (ENSBGRG00000025518) #22 GPR26 (ENSBGRG00000025595) #23 CPXM2 (ENSBGRG00000025616) #24 CHST15 (ENSBGRG00000025644) #25 OAT (ENSBGRG00000025665) #26 ENSBGRG00000025674 NKX1-2 (ENSBGRG00000006952) #27 LHPP (ENSBGRG00000007063) #28 FAM53B (ENSBGRG00000007368) #29 EEF1AKMT2 (ENSBGRG00000007473) #31 ABRAXAS2 (ENSBGRG00000007533) #32 ZRANB1 (ENSBGRG00000007598) #34 CTBP2 (ENSBGRG00000007663) #35 TEX36 (ENSBGRG00000008012) #36 EDRF1 (ENSBGRG00000008073) #37 UROS (ENSBGRG00000008669) Wild yak MODERN SPECIES 698 BUB3 (ENSBMUG00000004543) #22 GPR26 (ENSBMUG00000004510) #23 CPXM2 (ENSBMUG00000004488) #24 Laurasiatheria_b ANCESTRAL SPECIES 15 ENSGT00940000156955 #10 ENSGT00390000005511 #11 ENSGT00950000183145.E #13 ENSGT00940000163882 ENSGT00940000162108.tb ENSGT00940000165716 ENSGT00940000154525.b.a #14 ENSGT00940000163005.b ENSGT00390000017384 #16 ENSGT00940000163005.a ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Carnivora ANCESTRAL SPECIES 16 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT01010000224541 ENSGT00940000162108.tb ENSGT00940000162108.sb.b ENSGT00940000154525.b.a #14 ENSGT00940000163005.b ENSGT00390000017384.hb #16 ENSGT00940000163005.a ENSGT00390000017384.ib #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Caniformia ANCESTRAL SPECIES 13 ENSGT00950000183145.D ##13 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT01010000224541 ENSGT00940000162108.tb ENSGT00940000162108.sb.b ENSGT00940000154525.b.a #14 ENSGT00940000163005.b ENSGT00390000017384.hb #16 ENSGT00940000163005.a ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Caniformia_b ANCESTRAL SPECIES 10 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT01010000224541 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00390000017384.hb #16 ENSGT00940000163005.a ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Ursidae ANCESTRAL SPECIES 5 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955.d #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT01010000224541 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00390000017384.hb #16 ENSGT00940000163005.a ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Ursus ANCESTRAL SPECIES 7 ENSGT00940000155157 #9 ENSGT00940000156955.d #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT01010000224541 ENSGT00940000162108.tb ENSGT00940000162108.sb.a ENSGT00940000154525.b.a #14 ENSGT00390000017384.hb.b #16 ENSGT00390000017384.hb.a #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399.d #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 American black bear MODERN SPECIES 1379 ACADSB (ENSUAMG00000007695) #19 HMX3 (ENSUAMG00000007698) #20 HMX2 (ENSUAMG00000007700) #21 BUB3 (ENSUAMG00000007703) #22 Polar bear MODERN SPECIES 92 TACC2 (ENSUMAG00000004546) BTBD16 (ENSUMAG00000004944) #7 PLEKHA1 (ENSUMAG00000004973) #9 HTRA1 (ENSUMAG00000004978) #10 ENSUMAG00000004981 #13 ENSUMAG00000004990 #13 C10orf120 (ENSUMAG00000005005) #11 ENSUMAG00000005031 ENSUMAG00000005147 CUZD1 (ENSUMAG00000005153) #14 ENSUMAG00000005171 #16 ENSUMAG00000005180 #16 PSTK (ENSUMAG00000005193) #17 IKZF5 (ENSUMAG00000005198) #18 ACADSB (ENSUMAG00000005207) #19 BUB3 (ENSUMAG00000005215) #22 CPXM2 (ENSUMAG00000005241) #24 CHST15 (ENSUMAG00000005326) #25 OAT (ENSUMAG00000005337) #26 LHPP (ENSUMAG00000005342) #28 FAM53B (ENSUMAG00000005371) #29 ENSUMAG00000005375 #31 ABRAXAS2 (ENSUMAG00000005388) #32 ZRANB1 (ENSUMAG00000005395) #34 ENSUMAG00000005406 #35 TEX36 (ENSUMAG00000005429) #36 EDRF1 (ENSUMAG00000005462) #37 UROS (ENSUMAG00000005692) BCCIP (ENSUMAG00000005698) DHX32 (ENSUMAG00000005702) FANK1 (ENSUMAG00000005705) Giant Panda MODERN SPECIES 16 ENSAMEG00000010913 NSMCE4A (ENSAMEG00000010897) TACC2 (ENSAMEG00000010858) BTBD16 (ENSAMEG00000010849) #7 PLEKHA1 (ENSAMEG00000024104) #9 HTRA1 (ENSAMEG00000024939) #10 ENSAMEG00000008992 #13 ENSAMEG00000004692 #11 ENSAMEG00000004685 #16 ENSAMEG00000030562 ENSAMEG00000004671 #17 ENSAMEG00000004665 #18 ACADSB (ENSAMEG00000004639) #19 HMX3 (ENSAMEG00000024653) #20 HMX2 (ENSAMEG00000009520) #21 BUB3 (ENSAMEG00000009521) #22 GPR26 (ENSAMEG00000009542) #23 CPXM2 (ENSAMEG00000009550) #24 CHST15 (ENSAMEG00000010183) #25 OAT (ENSAMEG00000010160) #26 LHPP (ENSAMEG00000010149) #28 FAM53B (ENSAMEG00000004200) #29 EEF1AKMT2 (ENSAMEG00000004197) #31 ABRAXAS2 (ENSAMEG00000004177) #32 ZRANB1 (ENSAMEG00000004155) #34 ENSAMEG00000004118 #35 ENSAMEG00000007609 ENSAMEG00000007551 CCN4 (ENSAMEG00000029921) ENSAMEG00000007531 #36 ENSAMEG00000007492 #37 Mustelinae ANCESTRAL SPECIES 40 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00940000163882 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00390000017384.hb #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Ferret MODERN SPECIES 193 HTRA1 (ENSMPUG00000002895) #10 ENSMPUG00000002892 #13 ENSMPUG00000002887 C10orf120 (ENSMPUG00000002881) #11 ENSMPUG00000002877 ENSMPUG00000002820 CUZD1 (ENSMPUG00000002814) #14 ENSMPUG00000019258 ENSMPUG00000002809 #16 ENSMPUG00000002801 #16 PSTK (ENSMPUG00000002790) #17 IKZF5 (ENSMPUG00000002786) #18 ACADSB (ENSMPUG00000002783) #19 HMX3 (ENSMPUG00000002780) #20 HMX2 (ENSMPUG00000002778) #21 BUB3 (ENSMPUG00000002774) #22 ENSMPUG00000002770 GPR26 (ENSMPUG00000002767) #23 CPXM2 (ENSMPUG00000002760) #24 CHST15 (ENSMPUG00000002754) #25 OAT (ENSMPUG00000002748) #26 NKX1-2 (ENSMPUG00000002742) #27 LHPP (ENSMPUG00000002737) #28 FAM53B (ENSMPUG00000002735) #29 EEF1AKMT2 (ENSMPUG00000002730) #31 ABRAXAS2 (ENSMPUG00000002713) #32 ZRANB1 (ENSMPUG00000002701) #34 ENSMPUG00000002691 #35 ENSMPUG00000002687 ENSMPUG00000002664 ENSMPUG00000002661 American mink MODERN SPECIES 35 ATE1 (ENSNVIG00000006880) NSMCE4A (ENSNVIG00000006954) TACC2 (ENSNVIG00000006963) BTBD16 (ENSNVIG00000007104) #7 PLEKHA1 (ENSNVIG00000007135) #9 HTRA1 (ENSNVIG00000007206) #10 ENSNVIG00000007221 #13 C10orf120 (ENSNVIG00000007718) #11 CUZD1 (ENSNVIG00000007746) #14 ENSNVIG00000007783 #16 PSTK (ENSNVIG00000007798) #17 IKZF5 (ENSNVIG00000007802) #18 ACADSB (ENSNVIG00000007815) #19 HMX3 (ENSNVIG00000007846) #20 HMX2 (ENSNVIG00000007861) #21 BUB3 (ENSNVIG00000007873) #22 GPR26 (ENSNVIG00000007954) #23 CPXM2 (ENSNVIG00000007971) #24 CHSTF (ENSNVIG00000008037) #25 OAT (ENSNVIG00000008116) #26 NKX1-2 (ENSNVIG00000008189) #27 LHPP (ENSNVIG00000008217) #28 ENSNVIG00000008251 FAM53B (ENSNVIG00000008261) #29 EEF1AKMT2 (ENSNVIG00000008297) #31 ABRAXAS2 (ENSNVIG00000008316) #32 ZRANB1 (ENSNVIG00000008361) #34 CTBP2 (ENSNVIG00000008393) #35 TEX36 (ENSNVIG00000008467) #36 EDRF1 (ENSNVIG00000008487) #37 MMP21 (ENSNVIG00000008553) Canidae ANCESTRAL SPECIES 16 ENSGT00940000156955 #10 ENSGT00950000183145.D ##13 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000162108.sb.b ENSGT00940000154525.b.a #14 ENSGT00940000163005.b ENSGT00390000017384.hb.f #16 ENSGT00390000017384.hb.e #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Canis_lupus ANCESTRAL SPECIES 20 ENSGT00950000183145.E.kb.a #13 ENSGT00950000183145.B.a.b ##13 ENSGT00950000183145.E.lb #13 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000162108.sb.b ENSGT00940000154525.b.a #14 ENSGT00940000163005.b ENSGT00390000017384.hb.f #16 ENSGT00390000017384.hb.e #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00390000015889.o.a.b ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d Dingo MODERN SPECIES 165 ENSCAFG00020015160 #13 ENSCAFG00020015167 #13 ENSCAFG00020015171 #13 C10orf120 (ENSCAFG00020015180) #11 ENSCAFG00020015184 ENSCAFG00020015187 ENSCAFG00020015189 CUZD1 (ENSCAFG00020015193) #14 ENSCAFG00020015197 #16 ENSCAFG00020015204 #16 PSTK (ENSCAFG00020015208) #17 IKZF5 (ENSCAFG00020015212) #18 ACADSB (ENSCAFG00020015216) #19 HMX3 (ENSCAFG00020015221) #20 HMX2 (ENSCAFG00020015225) #21 BUB3 (ENSCAFG00020015234) #22 GPR26 (ENSCAFG00020015240) #23 CPXM2 (ENSCAFG00020015264) #24 CHST15 (ENSCAFG00020015364) #25 OAT (ENSCAFG00020015369) #26 ENSCAFG00020015371 NKX1-2 (ENSCAFG00020015374) #27 LHPP (ENSCAFG00020015380) #28 ENSCAFG00020015383 FAM53B (ENSCAFG00020015385) #29 EEF1AKMT2 (ENSCAFG00020015392) #31 ABRAXAS2 (ENSCAFG00020015395) #32 ZRANB1 (ENSCAFG00020015397) #34 ENSCAFG00020015405 #35 TEX36 (ENSCAFG00020015411) #36 EDRF1 (ENSCAFG00020015424) #37 Dog MODERN SPECIES 20 HTRA1 (ENSCAFG00845022222) #10 ENSCAFG00845022418 #13 ENSCAFG00845023612 #13 ENSCAFG00845023643 ##13 C10orf120 (ENSCAFG00845023695) #11 ENSCAFG00845023783 CUZD1 (ENSCAFG00845024055) #14 ENSCAFG00845024126 ENSCAFG00845024159 #16 ENSCAFG00845024221 #16 PSTK (ENSCAFG00845024287) #17 IKZF5 (ENSCAFG00845024334) #18 ACADSB (ENSCAFG00845024388) #19 HMX3 (ENSCAFG00845024473) #20 HMX2 (ENSCAFG00845024515) #21 PSTK (ENSCAFG00845024586) #22 GPR26 (ENSCAFG00845024706) #23 CHST15 (ENSCAFG00845024829) #24 ENSCAFG00845025131 #26 ENSCAFG00845025203 NKX1-2 (ENSCAFG00845025233) #27 LHPP (ENSCAFG00845025309) #28 ENSCAFG00845025467 FAM53B (ENSCAFG00845025520) #29 EEF1AKMT2 (ENSCAFG00845025641) #31 ABRAXAS2 (ENSCAFG00845025738) #32 ZRANB1 (ENSCAFG00845025822) #34 CTBP2 (ENSCAFG00845025974) #35 TEX36 (ENSCAFG00845026329) #36 EDRF1 (ENSCAFG00845026396) #37 MMP21 (ENSCAFG00845026645) Red fox MODERN SPECIES 82 C10orf120 (ENSVVUG00000006906) #11 ENSVVUG00000006890 ENSVVUG00000006611 CUZD1 (ENSVVUG00000006588) #14 ENSVVUG00000006564 #16 CUNH10orf88 (ENSVVUG00000006555) #16 PSTK (ENSVVUG00000006546) #17 IKZF5 (ENSVVUG00000006538) #18 ACADSB (ENSVVUG00000006530) #19 HMX2 (ENSVVUG00000006525) #21 BUB3 (ENSVVUG00000006513) #22 GPR26 (ENSVVUG00000006494) #23 CPXM2 (ENSVVUG00000006126) #24 CHST15 (ENSVVUG00000006046) #25 ENSVVUG00000006028 OAT (ENSVVUG00000006021) #26 ENSVVUG00000006014 LHPP (ENSVVUG00000006010) #28 FAM53B (ENSVVUG00000006005) #29 EEF1AKMT2 (ENSVVUG00000005997) #31 ABRAXAS2 (ENSVVUG00000005991) #32 ZRANB1 (ENSVVUG00000005988) #34 CTBP2 (ENSVVUG00000005975) #35 TEX36 (ENSVVUG00000005956) #36 EDRF1 (ENSVVUG00000005942) #37 ENSVVUG00000005832 Felidae ANCESTRAL SPECIES 14 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000163005.b ENSGT00390000017384.ib #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Panthera ANCESTRAL SPECIES 8 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000163005.b ENSGT00390000017384.ib #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Panthera_a ANCESTRAL SPECIES 9 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000163005.b ENSGT00390000017384.ib.c #16 ENSGT00390000017384.ib.d #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 leopard MODERN SPECIES 99 C10orf120 (ENSPPRG00000014122) #11 ENSPPRG00000014213 CUZD1 (ENSPPRG00000014335) #14 ENSPPRG00000014421 #16 ENSPPRG00000014479 #16 PSTK (ENSPPRG00000014523) #17 IKZF5 (ENSPPRG00000014597) #18 ACADSB (ENSPPRG00000014638) #19 HMX3 (ENSPPRG00000014702) #20 HMX2 (ENSPPRG00000014728) #21 BUB3 (ENSPPRG00000014829) #22 GPR26 (ENSPPRG00000014881) #23 CPXM2 (ENSPPRG00000014912) #24 CHST15 (ENSPPRG00000015072) #25 OAT (ENSPPRG00000016061) #26 NKX1-2 (ENSPPRG00000016141) #27 LHPP (ENSPPRG00000016378) #28 FAM53B (ENSPPRG00000016742) #29 EEF1AKMT2 (ENSPPRG00000017084) #31 ABRAXAS2 (ENSPPRG00000017184) #32 ZRANB1 (ENSPPRG00000017274) #34 CTBP2 (ENSPPRG00000017423) #35 TEX36 (ENSPPRG00000017465) #36 EDRF1 (ENSPPRG00000018983) #37 MMP21 (ENSPPRG00000019186) UROS (ENSPPRG00000019516) lion MODERN SPECIES 11 ENSPLOG00000018655 BTBD16 (ENSPLOG00000018372) #7 PLEKHA1 (ENSPLOG00000018098) #9 HTRA1 (ENSPLOG00000017957) #10 C10orf120 (ENSPLOG00000017895) #11 ENSPLOG00000016884 CUZD1 (ENSPLOG00000016651) #14 ENSPLOG00000016623 ENSPLOG00000016571 #16 ENSPLOG00000016528 #16 PSTK (ENSPLOG00000016472) #17 IKZF5 (ENSPLOG00000016444) #18 ACADSB (ENSPLOG00000016393) #19 HMX3 (ENSPLOG00000016360) #20 HMX2 (ENSPLOG00000016327) #21 BUB3 (ENSPLOG00000016227) #22 GPR26 (ENSPLOG00000016174) #23 CPXM2 (ENSPLOG00000016053) #24 CHST15 (ENSPLOG00000016014) #25 OAT (ENSPLOG00000015937) #26 NKX1-2 (ENSPLOG00000015903) #27 LHPP (ENSPLOG00000015773) #28 FAM53B (ENSPLOG00000015728) #29 EEF1AKMT2 (ENSPLOG00000015654) #31 ABRAXAS2 (ENSPLOG00000015611) #32 ZRANB1 (ENSPLOG00000015546) #34 CTBP2 (ENSPLOG00000015403) #35 TEX36 (ENSPLOG00000015239) #36 EDRF1 (ENSPLOG00000015097) #37 MMP21 (ENSPLOG00000014993) UROS (ENSPLOG00000014815) Tiger MODERN SPECIES 29 ENSPTIG00000001176 #16 ENSPTIG00000001202 #16 IKZF5 (ENSPTIG00000001713) #18 ACADSB (ENSPTIG00000001992) #19 BUB3 (ENSPTIG00000002215) #22 CPXM2 (ENSPTIG00000002466) #24 Cat MODERN SPECIES 242 ENSFCAG00000048419 ENSFCAG00000047757 ENSFCAG00000003657 #13 ENSFCAG00000026044 C10orf120 (ENSFCAG00000035584) #11 ENSFCAG00000029545 #14 ENSFCAG00000041375 ENSFCAG00000007571 #16 ENSFCAG00000030445 #16 PSTK (ENSFCAG00000027434) #17 IKZF5 (ENSFCAG00000041709) #18 ACADSB (ENSFCAG00000003421) #19 ENSFCAG00000048422 HMX3 (ENSFCAG00000041528) #20 HMX2 (ENSFCAG00000042782) #21 BUB3 (ENSFCAG00000024986) #22 ENSFCAG00000045983 #23 CPXM2 (ENSFCAG00000013258) #24 CHST15 (ENSFCAG00000010458) #25 OAT (ENSFCAG00000013847) #26 NKX1-2 (ENSFCAG00000042371) #27 LHPP (ENSFCAG00000001827) #28 FAM53B (ENSFCAG00000015458) #29 ABRAXAS2 (ENSFCAG00000022333) #32 ZRANB1 (ENSFCAG00000002438) #34 CTBP2 (ENSFCAG00000002441) #35 TEX36 (ENSFCAG00000012986) #36 EDRF1 (ENSFCAG00000009548) #37 MMP21 (ENSFCAG00000012987) UROS (ENSFCAG00000009550) BCCIP (ENSFCAG00000024151) Laurasiatheria_c ANCESTRAL SPECIES 15 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000165716 ENSGT00940000154525.b.a #14 ENSGT00940000163005.b ENSGT00390000017384 #16 ENSGT00940000163005.a ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Equus ANCESTRAL SPECIES 9 ENSGT00390000005511 #11 ENSGT00950000183145.E #13 ENSGT00940000162108.tb ENSGT00940000165716 ENSGT00940000154525.b.a #14 ENSGT00940000163005.b.a ENSGT00940000163005.b.b ENSGT00390000017384.kb #16 ENSGT00940000163005.a ENSGT00390000017384.jb #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Horse MODERN SPECIES ENSECAG00000006313 ENSECAG00000046082 C1H10orf120 (ENSECAG00000002143) #11 ENSECAG00000009186 #13 ENSECAG00000019510 ENSECAG00000014886 CUZD1 (ENSECAG00000014944) #14 ENSECAG00000013380 #16 ENSECAG00000040992 ENSECAG00000012505 #16 PSTK (ENSECAG00000011238) #17 IKZF5 (ENSECAG00000006987) #18 ENSECAG00000017638 #19 HMX3 (ENSECAG00000037274) #20 HMX2 (ENSECAG00000012690) #21 BUB3 (ENSECAG00000010047) #22 GPR26 (ENSECAG00000008245) #23 CPXM2 (ENSECAG00000024631) #24 CHST15 (ENSECAG00000022078) #25 OAT (ENSECAG00000014873) #26 NKX1-2 (ENSECAG00000039629) #27 LHPP (ENSECAG00000037483) #28 FAM53B (ENSECAG00000035894) #29 ENSECAG00000007838 #31 ABRAXAS2 (ENSECAG00000023340) #32 ZRANB1 (ENSECAG00000017587) #34 CTBP2 (ENSECAG00000022504) #35 TEX36 (ENSECAG00000020373) #36 EDRF1 (ENSECAG00000000346) #37 MMP21 (ENSECAG00000000156) UROS (ENSECAG00000017285) Donkey MODERN SPECIES 11 ENSEASG00005024831 C10orf120 (ENSEASG00005033462) #11 ENSEASG00005037253 #13 ENSEASG00005013472 ENSEASG00005032296 CUZD1 (ENSEASG00005013476) #14 ENSEASG00005028447 ENSEASG00005032712 #16 ENSEASG00005013481 ENSEASG00005013480 #16 PSTK (ENSEASG00005013485) #17 IKZF5 (ENSEASG00005024598) #18 ACADSB (ENSEASG00005013489) #19 HMX3 (ENSEASG00005013491) #20 HMX2 (ENSEASG00005033822) #21 BUB3 (ENSEASG00005013498) #22 GPR26 (ENSEASG00005013501) #23 CPXM2 (ENSEASG00005013580) #24 CHST15 (ENSEASG00005013977) #25 OAT (ENSEASG00005013980) #26 NKX1-2 (ENSEASG00005013984) #27 LHPP (ENSEASG00005013985) #28 FAM53B (ENSEASG00005013989) #29 EEF1AKMT2 (ENSEASG00005013990) #31 ABRAXAS2 (ENSEASG00005034209) #32 ZRANB1 (ENSEASG00005013996) #34 CTBP2 (ENSEASG00005014001) #35 TEX36 (ENSEASG00005030922) #36 EDRF1 (ENSEASG00005014012) #37 MMP21 (ENSEASG00005014020) UROS (ENSEASG00005014025) Chiroptera ANCESTRAL SPECIES 6 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00940000163882 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00940000163005.b ENSGT00390000017384 #16 ENSGT00940000163005.a ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.h #35 ENSGT00940000154430.g.b #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d Megabat MODERN SPECIES 2961 HMX3 (ENSPVAG00000015584) #20 HMX2 (ENSPVAG00000015587) #21 BUB3 (ENSPVAG00000015589) #22 Microchiroptera ANCESTRAL SPECIES 5 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00940000163882 ENSGT00390000005511 #11 ENSGT00940000162108.tb ENSGT00940000154525.b.a #14 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430.g.b #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Microbat MODERN SPECIES 2281 BUB3 (ENSMLUG00000017732) #22 Greater horseshoe bat MODERN SPECIES 7 TACC2 (ENSRFEG00010010381) BTBD16 (ENSRFEG00010010148) #7 PLEKHA1 (ENSRFEG00010010055) #9 HTRA1 (ENSRFEG00010010004) #10 ENSRFEG00010009865 #13 C10orf120 (ENSRFEG00010009794) #11 ENSRFEG00010009653 CUZD1 (ENSRFEG00010009612) #14 ENSRFEG00010009592 #16 ENSRFEG00010009483 #16 PSTK (ENSRFEG00010009389) #17 IKZF5 (ENSRFEG00010009357) #18 ENSRFEG00010009328 #19 HMX3 (ENSRFEG00010009301) #20 HMX2 (ENSRFEG00010009282) #21 BUB3 (ENSRFEG00010009105) #22 GPR26 (ENSRFEG00010009057) #23 CPXM2 (ENSRFEG00010009013) #24 CHST15 (ENSRFEG00010008970) #25 ENSRFEG00010008862 #26 NKX1-2 (ENSRFEG00010008843) #27 LHPP (ENSRFEG00010008786) #28 FAM53B (ENSRFEG00010008714) #29 EEF1AKMT2 (ENSRFEG00010008621) #31 ENSRFEG00010008598 #32 ZRANB1 (ENSRFEG00010008551) #34 ENSRFEG00010008512 #35 ENSRFEG00010008497 TEX36 (ENSRFEG00010008422) #36 EDRF1 (ENSRFEG00010008318) #37 MMP21 (ENSRFEG00010008092) Atlantogenata ANCESTRAL SPECIES 76 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 Afrotheria ANCESTRAL SPECIES 88 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 Tenrec MODERN SPECIES 7906 HMX2 (ENSETEG00000008784) #21 BUB3 (ENSETEG00000008787) #22 Afrotheria_a ANCESTRAL SPECIES 92 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 Hyrax MODERN SPECIES 9644 BUB3 (ENSPCAG00000007736) #22 Elephant MODERN SPECIES 537 PLEKHA1 (ENSLAFG00000007589) #9 HTRA1 (ENSLAFG00000007595) #10 ENSLAFG00000027577 #13 C10orf120 (ENSLAFG00000018686) #11 ENSLAFG00000001892 CUZD1 (ENSLAFG00000001895) #14 ENSLAFG00000023240 ENSLAFG00000018729 #16 ENSLAFG00000017108 #15 ENSLAFG00000012377 #16 PSTK (ENSLAFG00000029030) #17 IKZF5 (ENSLAFG00000012381) #18 ACADSB (ENSLAFG00000004375) #19 HMX3 (ENSLAFG00000021892) #20 HMX2 (ENSLAFG00000012760) #21 BUB3 (ENSLAFG00000012753) #22 GPR26 (ENSLAFG00000008737) #23 CPXM2 (ENSLAFG00000011034) #24 CHST15 (ENSLAFG00000006570) #25 OAT (ENSLAFG00000006793) #26 ENSLAFG00000027784 LHPP (ENSLAFG00000013934) #28 FAM53B (ENSLAFG00000006874) #29 EEF1AKMT2 (ENSLAFG00000007509) #31 ABRAXAS2 (ENSLAFG00000007513) #32 ZRANB1 (ENSLAFG00000015221) #34 ENSLAFG00000015229 #35 TEX36 (ENSLAFG00000013261) #36 EDRF1 (ENSLAFG00000013265) #37 MMP21 (ENSLAFG00000013270) UROS (ENSLAFG00000013271) Xenarthra ANCESTRAL SPECIES 829 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 Armadillo MODERN SPECIES 3266 PSTK (ENSDNOG00000045363) #17 IKZF5 (ENSDNOG00000011974) #18 ACADSB (ENSDNOG00000034380) #19 HMX3 (ENSDNOG00000017924) #20 HMX2 (ENSDNOG00000007320) #21 BUB3 (ENSDNOG00000007315) #22 Sloth MODERN SPECIES 13704 HMX2 (ENSCHOG00000010204) #21 BUB3 (ENSCHOG00000010213) #22 Marsupialia ANCESTRAL SPECIES ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000005511 #11 ENSGT00940000162108 ENSGT00950000183145.D ##13 ENSGT00940000154525.b.a #14 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00950000182946.d.a ENSGT00950000182946.c.a.b ENSGT00950000182946.c.a.a ENSGT00940000156169 ENSGT00940000157373 ENSGT00940000155989 ENSGT01010000222287.B.a.a.a.a ENSGT00390000000883 ENSGT00940000153956.a ENSGT00940000155896 ENSGT00940000157750 ENSGT00940000155648.B Opossum DUPLICATION Opossum MODERN SPECIES ENSMODG00000038482 BTBD16 (ENSMODG00000008285) #7 PLEKHA1 (ENSMODG00000008263) #9 HTRA1 (ENSMODG00000008235) #10 ENSMODG00000008170 #13 ENSMODG00000007900 #11 ENSMODG00000007895 #13 ENSMODG00000040843 ##13 CUZD1 (ENSMODG00000007863) #14 C10orf88 (ENSMODG00000007814) #16 PSTK (ENSMODG00000007808) #17 IKZF5 (ENSMODG00000038834) #18 ACADSB (ENSMODG00000007778) #19 HMX3 (ENSMODG00000007552) #20 HMX2 (ENSMODG00000007548) #21 ENSMODG00000007542 #22 GPR26 (ENSMODG00000007533) #23 CPXM2 (ENSMODG00000007502) #24 CHST15 (ENSMODG00000007407) #25 ENSMODG00000038857 ENSMODG00000024882 ENSMODG00000007358 ENSMODG00000045416 SLC16A12 (ENSMODG00000007350) PANK1 (ENSMODG00000007301) KIF20B (ENSMODG00000007283) ENSMODG00000024887 HTR7 (ENSMODG00000006874) ANKRD1 (ENSMODG00000006827) PCGF5 (ENSMODG00000006798) HECTD2 (ENSMODG00000006780) Opossum MODERN SPECIES 1 EPHA7 (ENSMODG00000018150) ENSMODG00000044142 ENSMODG00000018165 ENSMODG00000023387 MAP3K7 (ENSMODG00000018170) BACH2 (ENSMODG00000018176) GJA10 (ENSMODG00000018178) CASP8AP2 (ENSMODG00000018180) ENSMODG00000036973 MDN1 (ENSMODG00000018213) LYRM2 (ENSMODG00000018270) ANKRD6 (ENSMODG00000018273) RRAGD (ENSMODG00000018275) ENSMODG00000018277 GABRR2 (ENSMODG00000018278) ENSMODG00000049570 #22 GABRR1 (ENSMODG00000018279) PM20D2 (ENSMODG00000018281) SRSF12 (ENSMODG00000018282) ENSMODG00000050642 PNRC1 (ENSMODG00000018284) RNGTT (ENSMODG00000018289) SPACA1 (ENSMODG00000018292) ENSMODG00000018294 AKIRIN2 (ENSMODG00000018297) ORC3 (ENSMODG00000018304) RARS2 (ENSMODG00000018307) SLC35A1 (ENSMODG00000018310) CFAP206 (ENSMODG00000018314) C2H6orf163 (ENSMODG00000041425) SMIM8 (ENSMODG00000042548) Marsupialia_b ANCESTRAL SPECIES ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000162108 ENSGT00950000183145.D ##13 ENSGT00940000154525.b.a #14 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00950000182946.d.a ENSGT00950000182946.c.a.b ENSGT00950000182946.c.a.a ENSGT00940000156169 ENSGT00940000157373.b ENSGT00940000155989 ENSGT01010000222287.B.a.a.a.a ENSGT00390000000883 ENSGT00940000153956.a ENSGT00940000155896 ENSGT00940000157750 ENSGT00940000155648.B Diprotodontia ANCESTRAL SPECIES 6 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000162108 ENSGT00950000183145.D ##13 ENSGT00940000154525.b.a #14 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00950000182946.d.a ENSGT00950000182946.c.a.b ENSGT00950000182946.c.a.a ENSGT00940000156169 ENSGT00940000157373.b ENSGT00940000155989 ENSGT01010000222287.B.a.a.a.a ENSGT00390000000883 ENSGT00940000153956.a ENSGT00940000155896 ENSGT00940000157750 ENSGT00940000155648.B Diprotodontia_a DUPLICATION Diprotodontia_a ANCESTRAL SPECIES ENSGT00950000183091.A.a.e #22 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 564 ENSVURG00010006318 #22 Common wonbat MODERN SPECIES 563 ENSVURG00010006310 #22 koala MODERN SPECIES 244 ENSPCIG00000029936 ENSPCIG00000029942 LIPN (ENSPCIG00000029944) LIPM (ENSPCIG00000029947) ANKRD22 (ENSPCIG00000033168) STAMBPL1 (ENSPCIG00000029952) ACTA2 (ENSPCIG00000029954) ENSPCIG00000016460 CH25H (ENSPCIG00000023128) ENSPCIG00000023123 LIPA (ENSPCIG00000023124) OAT (ENSPCIG00000014184) #26 NKX1-2 (ENSPCIG00000023121) #27 LHPP (ENSPCIG00000023115) #28 FAM53B (ENSPCIG00000032462) #29 ENSPCIG00000023109 #22 EEF1AKMT2 (ENSPCIG00000023106) #31 ABRAXAS2 (ENSPCIG00000023103) #32 ENSPCIG00000023097 ZRANB1 (ENSPCIG00000023095) #34 ENSPCIG00000023084 #35 ENSPCIG00000023079 EDRF1 (ENSPCIG00000023062) #37 MMP21 (ENSPCIG00000022891) UROS (ENSPCIG00000022887) BCCIP (ENSPCIG00000022885) DHX32 (ENSPCIG00000022881) FANK1 (ENSPCIG00000022878) ADAM12 (ENSPCIG00000022814) ENSPCIG00000019059 INSYN2A (ENSPCIG00000011681) Diprotodontia_a ANCESTRAL SPECIES 7 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00390000012112 ENSGT00390000005511 #11 ENSGT00940000162108 ENSGT00950000183145.D ##13 ENSGT00940000154525.b.a #14 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a.f #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00950000182946.d.b ENSGT00950000182946.d.a ENSGT00950000182946.c.a.b ENSGT00950000182946.c.a.a ENSGT00940000156169 ENSGT00940000157373.b ENSGT00940000155989 ENSGT01010000222287.B.a.a.a.a ENSGT00390000000883 ENSGT00940000153956.a ENSGT00940000155896 ENSGT00940000157750 koala MODERN SPECIES 150 ENSPCIG00000025829 ENSPCIG00000025831 #11 ENSPCIG00000025834 ENSPCIG00000032747 ##13 CUZD1 (ENSPCIG00000025837) #14 C10orf88 (ENSPCIG00000025838) #16 PSTK (ENSPCIG00000025839) #17 IKZF5 (ENSPCIG00000025840) #18 ENSPCIG00000025841 #19 HMX3 (ENSPCIG00000025842) #20 HMX2 (ENSPCIG00000025843) #21 ENSPCIG00000025845 #22 ENSPCIG00000026830 GPR26 (ENSPCIG00000026831) #23 CPXM2 (ENSPCIG00000026833) #24 ENSPCIG00000028203 CHST15 (ENSPCIG00000014522) #25 ENSPCIG00000009126 ENSPCIG00000009123 ENSPCIG00000009121 ENSPCIG00000009119 SLC16A12 (ENSPCIG00000009112) ENSPCIG00000002392 ENSPCIG00000034252 KIF20B (ENSPCIG00000000668) ENSPCIG00000015744 HTR7 (ENSPCIG00000015740) Wallaby MODERN SPECIES 9510 HMX2 (ENSMEUG00000010163) #21 BUB3 (ENSMEUG00000010182) #22 Tasmanian devil MODERN SPECIES 1 BTBD16 (ENSSHAG00000010960) #7 PLEKHA1 (ENSSHAG00000024626) #9 HTRA1 (ENSSHAG00000009284) #10 ENSSHAG00000007803 #13 ENSSHAG00000007217 #11 ENSSHAG00000022182 ENSSHAG00000023839 ##13 ENSSHAG00000028811 #14 ENSSHAG00000011736 #14 C10orf88 (ENSSHAG00000024427) #16 ENSSHAG00000030670 #17 IKZF5 (ENSSHAG00000011508) #18 ACADSB (ENSSHAG00000000928) #19 HMX3 (ENSSHAG00000031226) #20 HMX2 (ENSSHAG00000029091) #21 BUB3 (ENSSHAG00000010372) #22 GPR26 (ENSSHAG00000030669) #23 CPXM2 (ENSSHAG00000023947) #24 ENSSHAG00000009520 #25 ENSSHAG00000001370 ENSSHAG00000002618 ENSSHAG00000021228 SLC16A12 (ENSSHAG00000014683) PANK1 (ENSSHAG00000014245) KIF20B (ENSSHAG00000013656) ENSSHAG00000027737 HTR7 (ENSSHAG00000007861) RPP30 (ENSSHAG00000007452) ANKRD1 (ENSSHAG00000007323) PCGF5 (ENSSHAG00000032079) HECTD2 (ENSSHAG00000018873) Platypus MODERN SPECIES 7 ENSOANG00000031768 #7 PLEKHA1 (ENSOANG00000007865) #9 HTRA1 (ENSOANG00000045001) #10 ENSOANG00000002000 #13 ENSOANG00000049858 ##13 ENSOANG00000045064 #13 ENSOANG00000020984 ##13 ENSOANG00000047128 CUZD1 (ENSOANG00000001997) #14 ENSOANG00000043341 #16 PSTK (ENSOANG00000001995) #17 IKZF5 (ENSOANG00000001994) #18 ACADSB (ENSOANG00000013324) #19 HMX3 (ENSOANG00000037629) #20 HMX2 (ENSOANG00000036447) #21 BUB3 (ENSOANG00000041516) #22 CPXM2 (ENSOANG00000038396) #24 ENSOANG00000030444 ENSOANG00000002087 ATE1 (ENSOANG00000047065) FGFR2 (ENSOANG00000029096) WDR11 (ENSOANG00000002737) PLPP4 (ENSOANG00000036798) SEC23IP (ENSOANG00000001533) MCMBP (ENSOANG00000001532) INPP5F (ENSOANG00000001530) BAG3 (ENSOANG00000009317) ENSOANG00000050160 RGS10 (ENSOANG00000012170) GRK5 (ENSOANG00000004388) PRDX3 (ENSOANG00000002979) Sauria ANCESTRAL SPECIES 8 ENSGT00940000156955 #10 ENSGT00950000183145.C ##13 ENSGT01030000235500 ENSGT00950000183145.E #13 ENSGT00940000163882 ENSGT00950000183145.A.b.a ##13 ENSGT00940000164475.a.b.b ENSGT00940000154525.b.a #14 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Lepidosauria ANCESTRAL SPECIES 8 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.A.b.a ##13 ENSGT00950000183145.E #13 ENSGT00940000163882 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 tuatara DUPLICATION tuatara MODERN SPECIES 1695 ENSSPUG00000015804 ATE1 (ENSSPUG00000015827) NSMCE4A (ENSSPUG00000015836) ENSSPUG00000015863 BTBD16 (ENSSPUG00000015930) #7 ENSSPUG00000015948 PLEKHA1 (ENSSPUG00000015964) #9 HTRA1 (ENSSPUG00000015982) #10 ENSSPUG00000016067 ##13 C10orf88 (ENSSPUG00000016259) #16 ENSSPUG00000016310 PSTK (ENSSPUG00000016345) #17 IKZF5 (ENSSPUG00000016359) #18 ACADSB (ENSSPUG00000016372) #19 HMX3 (ENSSPUG00000016381) #20 ENSSPUG00000016401 #22 ENSSPUG00000016416 #22 tuatara MODERN SPECIES 1695 ENSSPUG00000016416 #22 ENSSPUG00000016401 #22 HMX3 (ENSSPUG00000016381) #20 ACADSB (ENSSPUG00000016372) #19 IKZF5 (ENSSPUG00000016359) #18 PSTK (ENSSPUG00000016345) #17 ENSSPUG00000016310 C10orf88 (ENSSPUG00000016259) #16 ENSSPUG00000016067 ##13 HTRA1 (ENSSPUG00000015982) #10 PLEKHA1 (ENSSPUG00000015964) #9 ENSSPUG00000015948 BTBD16 (ENSSPUG00000015930) #7 ENSSPUG00000015863 NSMCE4A (ENSSPUG00000015836) ATE1 (ENSSPUG00000015827) Episquamata ANCESTRAL SPECIES 2 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.A.b.a ##13 ENSGT00950000183145.E #13 ENSGT00940000163882 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Laterata ANCESTRAL SPECIES ENSGT00500000044926 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.C ##13 ENSGT00940000154525.b.a #14 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Common wall lizard MODERN SPECIES 13 ENSPMRG00000006275 ENSPMRG00000006269 ENSPMRG00000006230 #13 ENSPMRG00000006207 #13 ENSPMRG00000006189 #13 ENSPMRG00000006176 ##13 CUZD1 (ENSPMRG00000006167) #14 C10orf88 (ENSPMRG00000006156) #16 ENSPMRG00000006144 PSTK (ENSPMRG00000006125) #17 IKZF5 (ENSPMRG00000006110) #18 ACADSB (ENSPMRG00000006103) #19 ENSPMRG00000006097 HMX3 (ENSPMRG00000006089) #20 HMX2 (ENSPMRG00000006086) #21 BUB3 (ENSPMRG00000006076) #22 GPR26 (ENSPMRG00000006065) #23 CPXM2 (ENSPMRG00000006029) #24 CHST15 (ENSPMRG00000006004) #25 OAT (ENSPMRG00000005967) #26 ENSPMRG00000005952 LHPP (ENSPMRG00000005937) #28 FAM53B (ENSPMRG00000005920) #29 EEF1AKMT2 (ENSPMRG00000005908) #31 ENSPMRG00000005902 ABRAXAS2 (ENSPMRG00000005892) #32 ZRANB1 (ENSPMRG00000005886) #34 CTBP2 (ENSPMRG00000005876) #35 ENSPMRG00000005869 TEX36 (ENSPMRG00000005865) #36 EDRF1 (ENSPMRG00000005859) #37 Argentine black and white tegu MODERN SPECIES 58 ENSSMRG00000004482 ##13 ENSSMRG00000004488 ##13 ENSSMRG00000004505 ##13 C10orf88 (ENSSMRG00000004535) #16 ENSSMRG00000004550 PSTK (ENSSMRG00000004569) #17 IKZF5 (ENSSMRG00000004571) #18 ACADSB (ENSSMRG00000004574) #19 HMX3 (ENSSMRG00000004577) #20 HMX2 (ENSSMRG00000004581) #21 BUB3 (ENSSMRG00000004592) #22 ENSSMRG00000004627 GPR26 (ENSSMRG00000004632) #23 CPXM2 (ENSSMRG00000004643) #24 CHST15 (ENSSMRG00000004684) #25 OAT (ENSSMRG00000004707) #26 NKX1-2 (ENSSMRG00000004710) #27 LHPP (ENSSMRG00000004798) #28 FAM53B (ENSSMRG00000004817) #29 EEF1AKMT2 (ENSSMRG00000004821) #31 ABRAXAS2 (ENSSMRG00000004833) #32 ZRANB1 (ENSSMRG00000004853) #34 CTBP2 (ENSSMRG00000004886) #35 ENSSMRG00000004947 ENSSMRG00000004954 EDRF1 (ENSSMRG00000004996) #37 Toxicofera ANCESTRAL SPECIES 2 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.A.b.a ##13 ENSGT00950000183145.E #13 ENSGT00940000163882 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Elapidae ANCESTRAL SPECIES 4 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.A.b.a ##13 ENSGT00950000183145.E #13 ENSGT00940000163882 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.b #23 ENSGT00950000183001.a.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 Elapidae_a ANCESTRAL SPECIES ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.A.b.a ##13 ENSGT00940000154525.b.a #14 ENSGT01030000236508 ENSGT00950000183145.E #13 ENSGT00940000163882 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Acanthophiinae ANCESTRAL SPECIES 1 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.A.b.a ##13 ENSGT00940000154525.b.a #14 ENSGT01030000236508 ENSGT00950000183145.E #13 ENSGT00940000163882 ENSGT00390000017384 #16 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Eastern brown snake MODERN SPECIES 25 BTBD16 (ENSPTXG00000011894) #7 PLEKHA1 (ENSPTXG00000011895) #9 HTRA1 (ENSPTXG00000011896) #10 ENSPTXG00000011897 ##13 ENSPTXG00000011898 ENSPTXG00000011899 ##13 ENSPTXG00000011900 ##13 ENSPTXG00000011901 ##13 ENSPTXG00000011902 ENSPTXG00000011903 #16 PSTK (ENSPTXG00000011904) #17 IKZF5 (ENSPTXG00000011905) #18 ACADSB (ENSPTXG00000011906) #19 HMX3 (ENSPTXG00000011907) #20 HMX2 (ENSPTXG00000011908) #21 BUB3 (ENSPTXG00000011909) #22 ENSPTXG00000011910 GPR26 (ENSPTXG00000011911) #23 CPXM2 (ENSPTXG00000011912) #24 CHST15 (ENSPTXG00000011913) #25 OAT (ENSPTXG00000011914) #26 NKX1-2 (ENSPTXG00000011915) #27 LHPP (ENSPTXG00000011916) #28 FAM53B (ENSPTXG00000011917) #29 EEF1AKMT2 (ENSPTXG00000011918) #31 ABRAXAS2 (ENSPTXG00000011919) #32 ZRANB1 (ENSPTXG00000011920) #34 CTBP2 (ENSPTXG00000011921) #35 TEX36 (ENSPTXG00000011922) #36 EDRF1 (ENSPTXG00000011923) #37 UROS (ENSPTXG00000011924) Mainland tiger snake MODERN SPECIES ENSNSUG00000001027 BTBD16 (ENSNSUG00000000997) #7 PLEKHA1 (ENSNSUG00000000993) #9 HTRA1 (ENSNSUG00000000969) #10 ENSNSUG00000000967 ##13 ENSNSUG00000000962 #14 ENSNSUG00000000957 ENSNSUG00000000956 #13 ENSNSUG00000000933 C10orf88 (ENSNSUG00000000899) #16 PSTK (ENSNSUG00000000895) #17 IKZF5 (ENSNSUG00000000891) #18 ACADSB (ENSNSUG00000000887) #19 HMX3 (ENSNSUG00000000884) #20 HMX2 (ENSNSUG00000000883) #21 BUB3 (ENSNSUG00000000878) #22 GPR26 (ENSNSUG00000000874) #23 CPXM2 (ENSNSUG00000000866) #24 CHST15 (ENSNSUG00000000864) #25 OAT (ENSNSUG00000000859) #26 LHPP (ENSNSUG00000000857) #28 FAM53B (ENSNSUG00000000856) #29 EEF1AKMT2 (ENSNSUG00000000854) #31 ABRAXAS2 (ENSNSUG00000000823) #32 ZRANB1 (ENSNSUG00000000817) #34 CTBP2 (ENSNSUG00000000680) #35 EDRF1 (ENSNSUG00000000562) #37 UROS (ENSNSUG00000000411) BCCIP (ENSNSUG00000000404) FANK1 (ENSNSUG00000000334) ADAM12 (ENSNSUG00000000295) Blue-lipped sea krait MODERN SPECIES 2646 HMX3 (ENSLLTG00000001663) #20 HMX2 (ENSLLTG00000001658) #21 BUB3 (ENSLLTG00000001650) #22 Indian cobra MODERN SPECIES 3 HTRA1 (ENSNNAG00000004719) #10 ENSNNAG00000004693 ##13 ENSNNAG00000004671 ##13 ENSNNAG00000004649 ENSNNAG00000004527 #13 ENSNNAG00000004497 ##13 ENSNNAG00000003976 ##13 ENSNNAG00000003929 C10orf88 (ENSNNAG00000003898) #16 ENSNNAG00000003842 PSTK (ENSNNAG00000003820) #17 IKZF5 (ENSNNAG00000003799) #18 ACADSB (ENSNNAG00000003781) #19 HMX3 (ENSNNAG00000003758) #20 HMX2 (ENSNNAG00000003744) #21 BUB3 (ENSNNAG00000003731) #22 ENSNNAG00000003714 ENSNNAG00000003699 #23 ENSNNAG00000003675 #23 CPXM2 (ENSNNAG00000003642) #24 CHST15 (ENSNNAG00000003620) #25 ENSNNAG00000003603 OAT (ENSNNAG00000003584) #26 ENSNNAG00000003572 LHPP (ENSNNAG00000003472) #28 FAM53B (ENSNNAG00000003446) #29 EEF1AKMT2 (ENSNNAG00000003438) #31 ABRAXAS2 (ENSNNAG00000003424) #32 ZRANB1 (ENSNNAG00000003411) #34 CTBP2 (ENSNNAG00000003385) #35 ENSNNAG00000003361 Lizard MODERN SPECIES 2 ENSACAG00000027662 ENSACAG00000005789 ENSACAG00000037493 CFAP46 (ENSACAG00000005868) ENSACAG00000021034 ENSACAG00000043412 ##13 ENSACAG00000017438 #14 C10orf88 (ENSACAG00000017448) #16 ENSACAG00000042520 ENSACAG00000017452 PSTK (ENSACAG00000017467) #17 IKZF5 (ENSACAG00000040076) #18 ACADSB (ENSACAG00000017471) #19 HMX3 (ENSACAG00000017490) #20 HMX2 (ENSACAG00000017493) #21 BUB3 (ENSACAG00000017494) #22 GPR26 (ENSACAG00000017503) #23 CPXM2 (ENSACAG00000017504) #24 CHST15 (ENSACAG00000017532) #25 ENSACAG00000040555 ENSACAG00000039920 ENSACAG00000040270 OAT (ENSACAG00000017543) #26 ENSACAG00000022361 LHPP (ENSACAG00000017564) #28 ENSACAG00000043228 ENSACAG00000044309 FAM53B (ENSACAG00000014398) #29 eef1akmt2 (ENSACAG00000038120) #31 ABRAXAS2 (ENSACAG00000014423) #32 ZRANB1 (ENSACAG00000014485) #34 Archelosauria ANCESTRAL SPECIES 10 ENSGT00940000156955 #10 ENSGT00950000183145.C ##13 ENSGT01030000235500 ENSGT00950000183145.E #13 ENSGT00940000163882 ENSGT00950000183145.A.b.a ##13 ENSGT00940000164475.a.b.b ENSGT00940000154525.b.a #14 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Archosauria ANCESTRAL SPECIES 7 ENSGT00950000183145.D ##13 ENSGT00950000183145.E #13 ENSGT01030000235500 ENSGT00950000183145.C ##13 ENSGT00940000163882 ENSGT00950000183145.A.b.a ##13 ENSGT00940000164475.a.b.b ENSGT00940000154525.b.a #14 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Aves ANCESTRAL SPECIES 6 ENSGT00950000183145.D ##13 ENSGT00950000183145.E #13 ENSGT01030000235500 ENSGT00950000183145.C ##13 ENSGT00940000163882.e.a ENSGT00950000183145.A.b.a ##13 ENSGT00940000164475.a.b.b.a ENSGT00940000154525.b.a #14 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Neognathae ANCESTRAL SPECIES 7 ENSGT00950000183145.D ##13 ENSGT00950000183145.E #13 ENSGT01030000235500 ENSGT00950000183145.C ##13 ENSGT00940000163882.e.a ENSGT00950000183145.A.b.a ##13 ENSGT00940000154525.b.a #14 ENSGT00940000163882.f ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Neognathae_b ANCESTRAL SPECIES 8 ENSGT00940000163882.e.b ENSGT00950000183145.D ##13 ENSGT00950000183145.E #13 ENSGT01030000235500 ENSGT00950000183145.C ##13 ENSGT00940000163882.e.a ENSGT00940000154525.b.a #14 ENSGT00940000163882.f ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Passeriformes ANCESTRAL SPECIES 10 ENSGT00940000156955 #10 ENSGT00940000163882.e.b ENSGT00950000183145.D ##13 ENSGT00950000183145.E #13 ENSGT01030000235500 ENSGT00950000183145.C ##13 ENSGT00940000154525.b.a #14 ENSGT00940000163882.f ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00950000182865.b.b.b.c.b ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00950000183683 ENSGT00390000014797 #37 ENSGT00390000009853 Passeriformes_d ANCESTRAL SPECIES 7 ENSGT00940000163882.e.b ENSGT00950000183145.D ##13 ENSGT00950000183145.E #13 ENSGT01030000235500 ENSGT00950000183145.C ##13 ENSGT00940000154525.b.a #14 ENSGT00940000163882.f ENSGT00940000163882.e.a ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00950000182865.b.b.b.c.b ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00950000183683 ENSGT00390000014797 #37 ENSGT00390000009853 Passeriformes_g ANCESTRAL SPECIES 8 ENSGT00500000044926 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.D ##13 ENSGT00940000154525.b.a #14 ENSGT00940000163882.f ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00950000182865.b.b.b.c.b ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00950000183683 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Passeroidea ANCESTRAL SPECIES 7 ENSGT00940000155447 ENSGT00500000044926 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.D ##13 ENSGT00940000163882.e.a ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00950000182865.b.b.b.c.b ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00950000183683 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Common canary MODERN SPECIES 7 ATE1 (ENSSCAG00000013795) NSMCE4A (ENSSCAG00000013790) TACC2 (ENSSCAG00000013757) PLEKHA1 (ENSSCAG00000013721) #9 HTRA1 (ENSSCAG00000013709) #10 ENSSCAG00000013688 ENSSCAG00000013676 ENSSCAG00000013649 #13 ENSSCAG00000013633 #14 ENSSCAG00000013608 ENSSCAG00000013599 #16 ENSSCAG00000013593 PSTK (ENSSCAG00000013588) #17 IKZF5 (ENSSCAG00000013584) #18 ACADSB (ENSSCAG00000013578) #19 BUB3 (ENSSCAG00000013570) #22 GPR26 (ENSSCAG00000013565) #23 CPXM2 (ENSSCAG00000013552) #24 CHST15 (ENSSCAG00000013544) #25 ENSSCAG00000013531 OAT (ENSSCAG00000013523) #26 LHPP (ENSSCAG00000013513) #28 EEF1AKMT2 (ENSSCAG00000013502) #31 ABRAXAS2 (ENSSCAG00000013495) #32 ZRANB1 (ENSSCAG00000013492) #34 CTBP2 (ENSSCAG00000013485) #35 ENSSCAG00000013479 EDRF1 (ENSSCAG00000013392) #37 UROS (ENSSCAG00000013356) BCCIP (ENSSCAG00000013344) DHX32 (ENSSCAG00000013331) Zebra finch MODERN SPECIES 28 FGFR2 (ENSTGUG00000011228) ATE1 (ENSTGUG00000011274) NSMCE4A (ENSTGUG00000011287) TACC2 (ENSTGUG00000011300) PLEKHA1 (ENSTGUG00000011311) #9 HTRA1 (ENSTGUG00000011319) #10 ENSTGUG00000011310 ##13 ENSTGUG00000019976 ENSTGUG00000018513 #16 ENSTGUG00000011344 PSTK (ENSTGUG00000011358) #17 IKZF5 (ENSTGUG00000023212) #18 ACADSB (ENSTGUG00000011363) #19 HMX3 (ENSTGUG00000011379) #20 HMX2 (ENSTGUG00000011380) #21 BUB3 (ENSTGUG00000011382) #22 GPR26 (ENSTGUG00000019570) #23 CPXM2 (ENSTGUG00000011397) #24 CHST15 (ENSTGUG00000011423) #25 ENSTGUG00000011432 OAT (ENSTGUG00000011436) #26 ENSTGUG00000022969 LHPP (ENSTGUG00000011442) #28 FAM53B (ENSTGUG00000011449) #29 EEF1AKMT2 (ENSTGUG00000011451) #31 ABRAXAS2 (ENSTGUG00000011455) #32 ZRANB1 (ENSTGUG00000011458) #34 CTBP2 (ENSTGUG00000011466) #35 ENSTGUG00000016414 EDRF1 (ENSTGUG00000011472) #37 UROS (ENSTGUG00000011481) Medium ground finch MODERN SPECIES 72 ATE1 (ENSGFOG00000013766) NSMCE4A (ENSGFOG00000013776) TACC2 (ENSGFOG00000013784) PLEKHA1 (ENSGFOG00000013792) #9 HTRA1 (ENSGFOG00000013803) #10 ENSGFOG00000013807 ENSGFOG00000013816 ENSGFOG00000013821 ENSGFOG00000013822 C10orf88 (ENSGFOG00000013824) #16 ENSGFOG00000013826 PSTK (ENSGFOG00000013828) #17 IKZF5 (ENSGFOG00000013829) #18 ACADSB (ENSGFOG00000013830) #19 HMX2 (ENSGFOG00000013831) #21 BUB3 (ENSGFOG00000013834) #22 GPR26 (ENSGFOG00000013835) #23 CPXM2 (ENSGFOG00000013837) #24 CHST15 (ENSGFOG00000013840) #25 OAT (ENSGFOG00000013842) #26 LHPP (ENSGFOG00000013844) #28 EEF1AKMT2 (ENSGFOG00000013845) #31 ABRAXAS2 (ENSGFOG00000013846) #32 ZRANB1 (ENSGFOG00000006329) #34 CTBP2 (ENSGFOG00000006333) #35 EDRF1 (ENSGFOG00000006339) #37 UROS (ENSGFOG00000006355) BCCIP (ENSGFOG00000006370) DHX32 (ENSGFOG00000006380) ADAM12 (ENSGFOG00000006402) C10orf90 (ENSGFOG00000006514) Flycatcher MODERN SPECIES 25 ATE1 (ENSFALG00000002151) NSMCE4A (ENSFALG00000002150) TACC2 (ENSFALG00000002148) PLEKHA1 (ENSFALG00000002147) #9 HTRA1 (ENSFALG00000028171) #10 ENSFALG00000002135 #13 ENSFALG00000025833 ENSFALG00000004924 ##13 ENSFALG00000023413 ENSFALG00000004913 #14 C10orf88 (ENSFALG00000028462) #16 ENSFALG00000004871 IKZF5 (ENSFALG00000004728) #18 ACADSB (ENSFALG00000024790) #19 HMX3 (ENSFALG00000026829) #20 BUB3 (ENSFALG00000004735) #22 ENSFALG00000028168 GPR26 (ENSFALG00000004740) #23 CPXM2 (ENSFALG00000004744) #24 CHST15 (ENSFALG00000004749) #25 ENSFALG00000004758 OAT (ENSFALG00000004768) #26 NKX1-2 (ENSFALG00000004783) #27 LHPP (ENSFALG00000004799) #28 FAM53B (ENSFALG00000004809) #29 EEF1AKMT2 (ENSFALG00000024735) #31 ABRAXAS2 (ENSFALG00000025047) #32 ZRANB1 (ENSFALG00000004837) #34 CTBP2 (ENSFALG00000004849) #35 ENSFALG00000024991 EDRF1 (ENSFALG00000001018) #37 Great tit MODERN SPECIES 26 TACC2 (ENSPMJG00000005700) PLEKHA1 (ENSPMJG00000005718) #9 HTRA1 (ENSPMJG00000005725) #10 ENSPMJG00000005727 ENSPMJG00000005730 ENSPMJG00000005731 ##13 ENSPMJG00000005732 ENSPMJG00000005734 ##13 C10orf88 (ENSPMJG00000005738) #16 ENSPMJG00000005740 IKZF5 (ENSPMJG00000005744) #18 PSTK (ENSPMJG00000005749) #17 ACADSB (ENSPMJG00000005752) #19 HMX3 (ENSPMJG00000005758) #20 HMX2 (ENSPMJG00000005760) #21 BUB3 (ENSPMJG00000005761) #22 GPR26 (ENSPMJG00000005767) #23 CPXM2 (ENSPMJG00000005769) #24 CHST15 (ENSPMJG00000005775) #25 ENSPMJG00000005788 OAT (ENSPMJG00000005814) #26 LHPP (ENSPMJG00000005818) #28 FAM53B (ENSPMJG00000005835) #29 EEF1AKMT2 (ENSPMJG00000005841) #31 ABRAXAS2 (ENSPMJG00000005844) #32 ZRANB1 (ENSPMJG00000005856) #34 CTBP2 (ENSPMJG00000005884) #35 ENSPMJG00000005905 EDRF1 (ENSPMJG00000005907) #37 UROS (ENSPMJG00000005911) BCCIP (ENSPMJG00000005912) Neognathae_c ANCESTRAL SPECIES 8 ENSGT00940000157052 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT01030000235500 ENSGT00950000183145.E #13 ENSGT00940000163882.e.a ENSGT00940000154525.b.a #14 ENSGT00940000163882.f ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Kakapo MODERN SPECIES 22 ATE1 (ENSSHBG00005003603) NSMCE4A (ENSSHBG00005003627) TACC2 (ENSSHBG00005003706) PLEKHA1 (ENSSHBG00005004075) #9 HTRA1 (ENSSHBG00005004092) #10 ENSSHBG00005004131 ENSSHBG00005004148 #13 ENSSHBG00005004175 C10orf88 (ENSSHBG00005004187) #16 ENSSHBG00005004196 PSTK (ENSSHBG00005004212) #17 IKZF5 (ENSSHBG00005004221) #18 ACADSB (ENSSHBG00005004229) #19 HMX3 (ENSSHBG00005004243) #20 HMX2 (ENSSHBG00005004253) #21 BUB3 (ENSSHBG00005004261) #22 GPR26 (ENSSHBG00005004264) #23 CPXM2 (ENSSHBG00005004275) #24 CHST15 (ENSSHBG00005004287) #25 OAT (ENSSHBG00005004295) #26 NKX1-2 (ENSSHBG00005004300) #27 LHPP (ENSSHBG00005004303) #28 FAM53B (ENSSHBG00005004307) #29 EEF1AKMT2 (ENSSHBG00005004312) #31 ABRAXAS2 (ENSSHBG00005004319) #32 ZRANB1 (ENSSHBG00005004326) #34 CTBP2 (ENSSHBG00005004333) #35 ENSSHBG00005004341 EDRF1 (ENSSHBG00005004438) #37 UROS (ENSSHBG00005004544) BCCIP (ENSSHBG00005004551) Golden eagle MODERN SPECIES 2 ENSACCG00020006968 PLEKHA1 (ENSACCG00020006872) #9 ENSACCG00020006849 HTRA1 (ENSACCG00020006834) #10 ENSACCG00020006816 ENSACCG00020006805 #14 ENSACCG00020006746 #13 ENSACCG00020006663 C10orf88 (ENSACCG00020006628) #16 ENSACCG00020006582 PSTK (ENSACCG00020006551) #17 IKZF5 (ENSACCG00020006532) #18 ACADSB (ENSACCG00020006524) #19 HMX3 (ENSACCG00020006513) #20 HMX2 (ENSACCG00020006506) #21 BUB3 (ENSACCG00020006497) #22 GPR26 (ENSACCG00020006486) #23 CPXM2 (ENSACCG00020006462) #24 CHST15 (ENSACCG00020006444) #25 OAT (ENSACCG00020006431) #26 NKX1-2 (ENSACCG00020006421) #27 LHPP (ENSACCG00020006411) #28 FAM53B (ENSACCG00020006378) #29 EEF1AKMT2 (ENSACCG00020006356) #31 ABRAXAS2 (ENSACCG00020006346) #32 ZRANB1 (ENSACCG00020006333) #34 CTBP2 (ENSACCG00020006318) #35 TEX36 (ENSACCG00020006300) #36 EDRF1 (ENSACCG00020006265) #37 UROS (ENSACCG00020006244) BCCIP (ENSACCG00020006208) Galloanserae ANCESTRAL SPECIES 6 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00940000163882.e.a ENSGT00950000183145.C.b ##13 ENSGT00940000154525.b.a.c.b #14 ENSGT00940000163882.f ENSGT00940000154525.b.a.d #14 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Anatidae ANCESTRAL SPECIES 4 ENSGT00940000156955 #10 ENSGT00940000154525.b.a.c.a #14 ENSGT00950000183145.C.a ##13 ENSGT00940000163882.e.a ENSGT00940000154525.b.a.c.b #14 ENSGT00940000163882.f ENSGT00950000183145.C.b ##13 ENSGT00940000154525.b.a.d #14 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Pink-footed goose MODERN SPECIES 74 ENSABRG00000006774 ##13 ENSABRG00000006754 ENSABRG00000006728 #14 ENSABRG00000006699 ##13 CUZD1 (ENSABRG00000006669) #14 C10orf88 (ENSABRG00000006659) #16 ENSABRG00000006640 PSTK (ENSABRG00000006637) #17 IKZF5 (ENSABRG00000006630) #18 ACADSB (ENSABRG00000006622) #19 HMX3 (ENSABRG00000006612) #20 HMX2 (ENSABRG00000006606) #21 BUB3 (ENSABRG00000006598) #22 GPR26 (ENSABRG00000006566) #23 CPXM2 (ENSABRG00000006558) #24 CHST15 (ENSABRG00000006544) #25 OAT (ENSABRG00000006520) #26 NKX1-2 (ENSABRG00000006517) #27 ENSABRG00000006514 LHPP (ENSABRG00000006505) #28 FAM53B (ENSABRG00000006493) #29 EEF1AKMT2 (ENSABRG00000006480) #31 ABRAXAS2 (ENSABRG00000006469) #32 ZRANB1 (ENSABRG00000006463) #34 CTBP2 (ENSABRG00000006461) #35 TEX36 (ENSABRG00000006456) #36 EDRF1 (ENSABRG00000006414) #37 UROS (ENSABRG00000006392) Duck MODERN SPECIES 24 ATE1 (ENSAPLG00000012854) NSMCE4A (ENSAPLG00000013184) TACC2 (ENSAPLG00000013559) PLEKHA1 (ENSAPLG00000013754) #9 HTRA1 (ENSAPLG00000014182) #10 ENSAPLG00000017490 #14 ENSAPLG00000028379 ##13 ENSAPLG00000022800 #14 ENSAPLG00000002332 C10orf88 (ENSAPLG00000018529) #16 ENSAPLG00000015412 PSTK (ENSAPLG00000015335) #17 IKZF5 (ENSAPLG00000015301) #18 ACADSB (ENSAPLG00000015129) #19 HMX3 (ENSAPLG00000025450) #20 BUB3 (ENSAPLG00000014959) #22 GPR26 (ENSAPLG00000014879) #23 ENSAPLG00000029693 #24 ENSAPLG00000014617 #24 OAT (ENSAPLG00000015424) #26 NKX1-2 (ENSAPLG00000018196) #27 LHPP (ENSAPLG00000015176) #28 FAM53B (ENSAPLG00000015172) #29 EEF1AKMT2 (ENSAPLG00000015137) #31 ABRAXAS2 (ENSAPLG00000014971) #32 ZRANB1 (ENSAPLG00000014747) #34 CTBP2 (ENSAPLG00000014447) #35 TEX36 (ENSAPLG00000013143) #36 EDRF1 (ENSAPLG00000012708) #37 UROS (ENSAPLG00000012701) BCCIP (ENSAPLG00000012566) Phasianidae ANCESTRAL SPECIES 6 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00940000163882.e.a ENSGT00950000183145.C.b ##13 ENSGT00940000163882.f ENSGT00950000183145.A.b.a ##13 ENSGT00940000154525.b.a.d #14 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227 Japanese quail MODERN SPECIES 24 TACC2 (ENSCJPG00005020158) PLEKHA1 (ENSCJPG00005020159) #9 HTRA1 (ENSCJPG00005020160) #10 ENSCJPG00005020161 #14 ENSCJPG00005020162 ENSCJPG00005020163 ##13 ENSCJPG00005020164 ##13 ENSCJPG00005020166 C10orf88 (ENSCJPG00005020167) #16 ENSCJPG00005020168 PSTK (ENSCJPG00005020169) #17 IKZF5 (ENSCJPG00005020170) #18 ACADSB (ENSCJPG00005020171) #19 HMX3 (ENSCJPG00005020174) #20 HMX2 (ENSCJPG00005020175) #21 BUB3 (ENSCJPG00005020176) #22 GPR26 (ENSCJPG00005020183) #23 CPXM2 (ENSCJPG00005020184) #24 CHST15 (ENSCJPG00005000893) #25 OAT (ENSCJPG00005000924) #26 ENSCJPG00005000989 LHPP (ENSCJPG00005001010) #28 FAM53B (ENSCJPG00005001041) #29 ENSCJPG00005001056 #31 ABRAXAS2 (ENSCJPG00005001064) #32 ZRANB1 (ENSCJPG00005001074) #34 CTBP2 (ENSCJPG00005001082) #35 TEX36 (ENSCJPG00005001093) #36 EDRF1 (ENSCJPG00005001118) #37 UROS (ENSCJPG00005001169) BCCIP (ENSCJPG00005001184) Phasianidae_b ANCESTRAL SPECIES 6 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00940000163882.e.a ENSGT00950000183145.A.b.a ##13 ENSGT00940000154525.b.a.d #14 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227 Chicken MODERN SPECIES 35 TACC2 (ENSGALG00010001465) PLEKHA1 (ENSGALG00010001702) #9 HTRA1 (ENSGALG00010001705) #10 ENSGALG00010001707 #13 ENSGALG00010001726 ENSGALG00010003199 #13 ENSGALG00010001743 ##13 CUZD1 (ENSGALG00010001755) #14 C10orf88 (ENSGALG00010001759) #16 ENSGALG00010001764 IKZF5 (ENSGALG00010001793) #18 PSTK (ENSGALG00010001798) #17 ACADSB (ENSGALG00010001811) #19 HMX3 (ENSGALG00010001815) #20 HMX2 (ENSGALG00010001821) #21 BUB3 (ENSGALG00010001832) #22 GPR26 (ENSGALG00010001842) #23 CPXM2 (ENSGALG00010001852) #24 CHST15 (ENSGALG00010001856) #25 OAT (ENSGALG00010001877) #26 ENSGALG00010001884 LHPP (ENSGALG00010001898) #28 FAM53B (ENSGALG00010001910) #29 EEF1AKMT2 (ENSGALG00010001915) #31 FAM175B (ENSGALG00010001935) #32 ZRANB1 (ENSGALG00010002401) #34 CTBP2 (ENSGALG00010002419) #35 TEX36 (ENSGALG00010002426) #36 EDRF1 (ENSGALG00010002445) #37 UROS (ENSGALG00010002466) BCCIP (ENSGALG00010002487) Turkey MODERN SPECIES 28 DHX32 (ENSMGAG00000011735) ENSMGAG00000011712 #37 UROS (ENSMGAG00000011725) TEX36 (ENSMGAG00000017663) #36 ENSMGAG00000021006 #37 ZRANB1 (ENSMGAG00000011701) #34 ENSMGAG00000011703 #35 ABRAXAS2 (ENSMGAG00000011692) #32 ENSMGAG00000011686 #31 ENSMGAG00000011677 #28 ENSMGAG00000011675 #26 ENSMGAG00000011673 #25 ENSMGAG00000011662 #24 GPR26 (ENSMGAG00000011624) #23 ENSMGAG00000011617 #21 ENSMGAG00000011619 #22 HMX3 (ENSMGAG00000011613) #20 ACADSB (ENSMGAG00000011603) #19 ENSMGAG00000017710 #17 ENSMGAG00000011599 #18 ENSMGAG00000011584 ENSMGAG00000011564 ##13 ENSMGAG00000022374 ##13 ENSMGAG00000011568 #14 ENSMGAG00000011580 #16 ENSMGAG00000011551 #10 ENSMGAG00000011530 #9 ENSMGAG00000011516 ENSMGAG00000011490 ENSMGAG00000011508 ENSMGAG00000011456 African ostrich MODERN SPECIES 463 ENSSCUG00000007854 ENSSCUG00000007853 ENSSCUG00000007847 ##13 CUZD1 (ENSSCUG00000007842) #14 ENSSCUG00000007840 #16 ENSSCUG00000007839 PSTK (ENSSCUG00000007836) #17 IKZF5 (ENSSCUG00000007835) #18 ACADSB (ENSSCUG00000007834) #19 BUB3 (ENSSCUG00000007830) #22 GPR26 (ENSSCUG00000007827) #23 CPXM2 (ENSSCUG00000007823) #24 CHST15 (ENSSCUG00000007819) #25 OAT (ENSSCUG00000007810) #26 LHPP (ENSSCUG00000007807) #28 FAM53B (ENSSCUG00000007804) #29 EEF1AKMT2 (ENSSCUG00000007801) #31 ABRAXAS2 (ENSSCUG00000007799) #32 ZRANB1 (ENSSCUG00000007796) #34 ENSSCUG00000007795 ENSSCUG00000007793 ENSSCUG00000007792 #37 UROS (ENSSCUG00000007791) BCCIP (ENSSCUG00000007788) DHX32 (ENSSCUG00000007786) Australian saltwater crocodile MODERN SPECIES 68 ENSCPRG00005010028 ENSCPRG00005010020 ENSCPRG00005010017 ##13 ENSCPRG00005010015 ##13 ENSCPRG00005010013 ##13 ENSCPRG00005009997 CUZD1 (ENSCPRG00005009971) #14 C10orf88 (ENSCPRG00005009963) #16 ENSCPRG00005009952 PSTK (ENSCPRG00005009943) #17 IKZF5 (ENSCPRG00005009941) #18 ENSCPRG00005009939 ACADSB (ENSCPRG00005009928) #19 HMX3 (ENSCPRG00005009925) #20 HMX2 (ENSCPRG00005009921) #21 BUB3 (ENSCPRG00005009920) #22 GPR26 (ENSCPRG00005009894) #23 CPXM2 (ENSCPRG00005009835) #24 ENSCPRG00005009822 CHST15 (ENSCPRG00005009813) #25 OAT (ENSCPRG00005009806) #26 LHPP (ENSCPRG00005009804) #28 FAM53B (ENSCPRG00005009799) #29 EEF1AKMT2 (ENSCPRG00005009789) #31 ABRAXAS2 (ENSCPRG00005009783) #32 ZRANB1 (ENSCPRG00005009776) #34 CTBP2 (ENSCPRG00005009769) #35 TEX36 (ENSCPRG00005009741) #36 EDRF1 (ENSCPRG00005009723) #37 UROS (ENSCPRG00005009716) BCCIP (ENSCPRG00005009713) Cryptodira ANCESTRAL SPECIES 6 ENSGT00500000044926 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT00940000163882 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00390000011476 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT01030000235500.a ENSGT00940000163882.d ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Emydidae ANCESTRAL SPECIES 6 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT01030000235500.a ENSGT00940000163882.d ENSGT00950000183145.A.a ##13 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Three-toed box turtle MODERN SPECIES 39 ATE1 (ENSTMTG00000018984) NSMCE4A (ENSTMTG00000019033) ENSTMTG00000019055 BTBD16 (ENSTMTG00000019086) #7 PLEKHA1 (ENSTMTG00000019123) #9 HTRA1 (ENSTMTG00000019179) #10 ENSTMTG00000019204 ##13 ENSTMTG00000019231 ENSTMTG00000019289 C10orf88 (ENSTMTG00000019303) #16 PSTK (ENSTMTG00000019320) #17 IKZF5 (ENSTMTG00000019326) #18 ACADSB (ENSTMTG00000019334) #19 HMX3 (ENSTMTG00000019354) #20 HMX2 (ENSTMTG00000019363) #21 BUB3 (ENSTMTG00000019371) #22 GPR26 (ENSTMTG00000019385) #23 ENSTMTG00000019402 #24 ENSTMTG00000019417 #24 CHST15 (ENSTMTG00000019442) #25 OAT (ENSTMTG00000019462) #26 NKX1-2 (ENSTMTG00000019477) #27 LHPP (ENSTMTG00000019511) #28 FAM53B (ENSTMTG00000019517) #29 EEF1AKMT2 (ENSTMTG00000019525) #31 ABRAXAS2 (ENSTMTG00000019534) #32 ZRANB1 (ENSTMTG00000019546) #34 CTBP2 (ENSTMTG00000019568) #35 TEX36 (ENSTMTG00000019599) #36 EDRF1 (ENSTMTG00000019646) #37 UROS (ENSTMTG00000019712) painted turtle MODERN SPECIES 15 RGS10 (ENSCPBG00000001134) TIAL1 (ENSCPBG00000001103) BAG3 (ENSCPBG00000001092) PLEKHA1 (ENSCPBG00000001016) #9 HTRA1 (ENSCPBG00000000966) #10 ENSCPBG00000000282 #13 ENSCPBG00000000175 ENSCPBG00000000160 ENSCPBG00000000152 ##13 C10orf88 (ENSCPBG00000000128) #16 ENSCPBG00000000116 IKZF5 (ENSCPBG00000028099) #18 ACADSB (ENSCPBG00000028097) #19 HMX3 (ENSCPBG00000028093) #20 HMX2 (ENSCPBG00000028090) #21 BUB3 (ENSCPBG00000028089) #22 GPR26 (ENSCPBG00000028085) #23 CPXM2 (ENSCPBG00000028082) #24 CHST15 (ENSCPBG00000028078) #25 OAT (ENSCPBG00000028074) #26 NKX1-2 (ENSCPBG00000028073) #27 LHPP (ENSCPBG00000028072) #28 FAM53B (ENSCPBG00000028070) #29 EEF1AKMT2 (ENSCPBG00000028069) #31 ABRAXAS2 (ENSCPBG00000028067) #32 ZRANB1 (ENSCPBG00000028065) #34 CTBP2 (ENSCPBG00000028062) #35 ENSCPBG00000028058 EDRF1 (ENSCPBG00000028056) #37 UROS (ENSCPBG00000028054) BCCIP (ENSCPBG00000028052) Testudinidae ANCESTRAL SPECIES 9 ENSGT00940000157052 ENSGT00940000161718 #7 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00950000183145.E #13 ENSGT01030000235500.a ENSGT00940000163882.d ENSGT00950000183145.A.a.c ##13 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00390000009853 ENSGT00390000000696 Goode s thornscrub tortoise MODERN SPECIES 21 BTBD16 (ENSGEVG00005020101) #7 PLEKHA1 (ENSGEVG00005009217) #9 HTRA1 (ENSGEVG00005009396) #10 ENSGEVG00005009567 #13 ENSGEVG00005009616 #13 ENSGEVG00005009786 ENSGEVG00005009832 ENSGEVG00005009897 ##13 C10orf88 (ENSGEVG00005009973) #16 ENSGEVG00005009999 PSTK (ENSGEVG00005010124) #17 IKZF5 (ENSGEVG00005010148) #18 ACADSB (ENSGEVG00005010261) #19 HMX3 (ENSGEVG00005011045) #20 HMX2 (ENSGEVG00005011080) #21 BUB3 (ENSGEVG00005011128) #22 GPR26 (ENSGEVG00005011147) #23 CPXM2 (ENSGEVG00005011196) #24 CHST15 (ENSGEVG00005011451) #25 OAT (ENSGEVG00005011512) #26 NKX1-2 (ENSGEVG00005011543) #27 LHPP (ENSGEVG00005011572) #28 FAM53B (ENSGEVG00005011589) #29 EEF1AKMT2 (ENSGEVG00005011617) #31 ABRAXAS2 (ENSGEVG00005011649) #32 ZRANB1 (ENSGEVG00005011667) #34 CTBP2 (ENSGEVG00005011743) #35 TEX36 (ENSGEVG00005011932) #36 EDRF1 (ENSGEVG00005012029) #37 UROS (ENSGEVG00005012099) BCCIP (ENSGEVG00005012179) Abingdon island giant tortoise MODERN SPECIES 1955 ENSCABG00000014857 ENSCABG00000014856 ENSCABG00000014854 ##13 ENSCABG00000014853 #16 PSTK (ENSCABG00000014852) #17 IKZF5 (ENSCABG00000014850) #18 ACADSB (ENSCABG00000014847) #19 HMX3 (ENSCABG00000014843) #20 HMX2 (ENSCABG00000014840) #21 BUB3 (ENSCABG00000014835) #22 GPR26 (ENSCABG00000014830) #23 CPXM2 (ENSCABG00000014723) #24 CHST15 (ENSCABG00000014721) #25 OAT (ENSCABG00000014677) #26 NKX1-2 (ENSCABG00000014675) #27 LHPP (ENSCABG00000014672) #28 FAM53B (ENSCABG00000014667) #29 EEF1AKMT2 (ENSCABG00000014664) #31 ABRAXAS2 (ENSCABG00000014662) #32 ZRANB1 (ENSCABG00000014658) #34 CTBP2 (ENSCABG00000014649) #35 Chinese turtle MODERN SPECIES 2099 C10orf88 (ENSPSIG00000007835) #16 ENSPSIG00000007841 PSTK (ENSPSIG00000007956) #17 IKZF5 (ENSPSIG00000008029) #18 ACADSB (ENSPSIG00000008049) #19 ENSPSIG00000001185 ENSPSIG00000001208 HMX3 (ENSPSIG00000008269) #20 HMX2 (ENSPSIG00000008282) #21 BUB3 (ENSPSIG00000008291) #22 GPR26 (ENSPSIG00000008465) #23 CPXM2 (ENSPSIG00000008503) #24 CHST15 (ENSPSIG00000008647) #25 OAT (ENSPSIG00000008761) #26 LHPP (ENSPSIG00000009629) #28 FAM53B (ENSPSIG00000009711) #29 EEF1AKMT2 (ENSPSIG00000009720) #31 ABRAXAS2 (ENSPSIG00000010008) #32 ENSPSIG00000010014 CTBP2 (ENSPSIG00000010025) #35 ENSPSIG00000001220 EDRF1 (ENSPSIG00000010245) #37 UROS (ENSPSIG00000011315) BCCIP (ENSPSIG00000011321) ENSPSIG00000011522 Anura ANCESTRAL SPECIES 179 ENSGT00940000163882.b ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00940000158045 #34 ENSGT00940000154430 #35 Leishan spiny toad MODERN SPECIES 9 ENSLLEG00000030118 ATE1 (ENSLLEG00000030100) ENSLLEG00000030064 #16 NSMCE4A (ENSLLEG00000030045) TACC2 (ENSLLEG00000029844) HTRA1 (ENSLLEG00000029621) #10 ENSLLEG00000029588 ##13 ENSLLEG00000029566 ENSLLEG00000029534 PSTK (ENSLLEG00000029522) #17 IKZF5 (ENSLLEG00000029492) #18 ACADSB (ENSLLEG00000029470) #19 HMX3 (ENSLLEG00000029455) #20 GBA2 (ENSLLEG00000028430) HMX2 (ENSLLEG00000028332) #21 BUB3 (ENSLLEG00000028262) #22 GPR26 (ENSLLEG00000028244) #23 CPXM2 (ENSLLEG00000028178) #24 ENSLLEG00000028167 CHST15 (ENSLLEG00000028004) #25 ENSLLEG00000027933 OAT (ENSLLEG00000027829) #26 NKX1-2 (ENSLLEG00000027814) #27 LHPP (ENSLLEG00000027758) #28 EEF1AKMT2 (ENSLLEG00000027662) #31 ABRAXAS2 (ENSLLEG00000027625) #32 ZRANB1 (ENSLLEG00000027590) #34 ENSLLEG00000027296 NKX6-2 (ENSLLEG00000027241) INPP5A (ENSLLEG00000027113) PWWP2B (ENSLLEG00000027069) Frog MODERN SPECIES 7 lhpp (ENSXETG00000031230) #28 eef1akmt2 (ENSXETG00000030721) #31 abraxas2 (ENSXETG00000023627) #32 zranb1 (ENSXETG00000023629) #34 ctbp2 (ENSXETG00000023631) #35 ENSXETG00000039487 cuzd1 (ENSXETG00000030070) C10orf88 (ENSXETG00000031007) #16 XB990656 [provisional:adam9] (ENSXETG00000031289) pstk (ENSXETG00000039097) #17 ikzf5 (ENSXETG00000009559) #18 ENSXETG00000046532 acadsb (ENSXETG00000009561) #19 hmx3 (ENSXETG00000009562) #20 hmx2 (ENSXETG00000027771) #21 bub3 (ENSXETG00000009564) #22 gpr26 (ENSXETG00000009569) #23 aplp1 (ENSXETG00000009571) #24 chst15 (ENSXETG00000046777) #25 ENSXETG00000049094 oat (ENSXETG00000009576) #26 plpp4 (ENSXETG00000009592) wdr11 (ENSXETG00000015603) fgfr2 (ENSXETG00000015592) ate1 (ENSXETG00000015591) XB5717875 [provisional:plac8] (ENSXETG00000015589) tacc2 (ENSXETG00000015587) ENSXETG00000039419 plekha1 (ENSXETG00000015586) #9 htra1 (ENSXETG00000015580) #10 g6pc1.2 (ENSXETG00000015579) Coelacanth MODERN SPECIES 1889 BUB3 (ENSLACG00000000990) #22 ENSLACG00000003792 Actinopterygii ANCESTRAL SPECIES 7 ENSGT00940000153912.A ENSGT00940000155910 ENSGT00530000064550.B ENSGT00940000160064.a.a ENSGT00390000015768 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00940000163882 ENSGT00390000017384 #16 ENSGT00940000166847 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00530000063474.A ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 ENSGT00940000159140.d Neopterygii ANCESTRAL SPECIES 10 ENSGT00940000155910.c.b.b ENSGT00530000064550.B ENSGT00940000160064.a.a ENSGT00390000015768 ENSGT00940000169682 ENSGT00940000155157 #9 ENSGT00940000156955 #10 ENSGT00940000163882 ENSGT00390000017384 #16 ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286 #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00730000114509 ENSGT00950000183001.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719 #25 ENSGT00630000089895 #26 ENSGT00940000162535 #27 ENSGT00940000159002 #28 ENSGT00530000063371.B #29 ENSGT00390000013399 #31 ENSGT00530000063424.a #32 ENSGT00530000063474.A ENSGT00940000158045 #34 ENSGT00940000154430 #35 ENSGT00390000012491 #36 ENSGT00390000014797 #37 Osteoglossocephalai ANCESTRAL SPECIES 117 ENSGT00940000158879 ENSGT00940000153912.A.a ENSGT00940000155910.c.b.b ENSGT00390000015768.i.b ENSGT00940000169682 ENSGT00940000155157.b #9 ENSGT00940000156955.a.b #10 ENSGT00390000017384 #16 ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00940000158286.e.a #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.d #23 ENSGT00730000114509 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430 #35 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227 Osteoglossiformes ANCESTRAL SPECIES 74 ENSGT01100000263491.a.b.a.a.a.a.a.b.mb.a ENSGT00390000007586.a.a.b ENSGT00940000153912.A.a ENSGT00940000155910.c.b.a.b.a.b ENSGT00390000015768.i.a.n ENSGT00940000155157.b #9 ENSGT00940000156955.a.b #10 ENSGT00390000017384 #16 ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035 #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00940000158286.e.a #20 ENSGT00940000160392.o.a #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414.r #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063424.a.q #32 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.a.b #35 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227 ENSGT00940000160878.f P. kingsleyae MODERN SPECIES 26 dnajc9 (ENSPKIG00000002650) ENSPKIG00000002670 ENSPKIG00000002686 ENSPKIG00000002705 GRID1 (ENSPKIG00000002744) ENSPKIG00000002803 PLEKHA1 (ENSPKIG00000002866) #9 htra1b (ENSPKIG00000002932) #10 C10orf88 (ENSPKIG00000002972) #16 zgc:174164 (ENSPKIG00000002999) PSTK (ENSPKIG00000003035) #17 ikzf5 (ENSPKIG00000003059) #18 ACADSB (ENSPKIG00000003087) #19 HMX3 (ENSPKIG00000003121) #20 hmx2 (ENSPKIG00000003134) #21 bub3 (ENSPKIG00000003151) #22 GPR26 (ENSPKIG00000003175) #23 CPXM2 (ENSPKIG00000003218) #24 CHST15 (ENSPKIG00000003364) #25 oat (ENSPKIG00000003389) #26 lhpp (ENSPKIG00000003434) #28 fam53b (ENSPKIG00000003495) #29 abraxas2 (ENSPKIG00000003536) #32 hpdl (ENSPKIG00000003595) ZRANB1 (ENSPKIG00000003627) #34 ctbp2a (ENSPKIG00000003666) #35 mmp21 (ENSPKIG00000003703) uros (ENSPKIG00000003751) bccip (ENSPKIG00000003838) dhx32a (ENSPKIG00000003903) FANK1 (ENSPKIG00000003940) Asian bonytongue MODERN SPECIES 16 dnajc9 (ENSSFOG00015009690) ENSSFOG00015009678 ENSSFOG00015009668 ENSSFOG00015009663 GRID1 (ENSSFOG00015009596) WAPL (ENSSFOG00015009509) PLEKHA1 (ENSSFOG00015009461) #9 htra1b (ENSSFOG00015009397) #10 C10orf88 (ENSSFOG00015009366) #16 zgc:174164 (ENSSFOG00015009320) PSTK (ENSSFOG00015009307) #17 ikzf5 (ENSSFOG00015027459) #18 ACADSB (ENSSFOG00015009242) #19 hmx3a (ENSSFOG00015030207) #20 HMX2 (ENSSFOG00015031908) #21 bub3 (ENSSFOG00015009190) #22 GPR26 (ENSSFOG00015009734) #23 CPXM2 (ENSSFOG00015009124) #24 CHST15 (ENSSFOG00015009059) #25 oat (ENSSFOG00015009016) #26 lhpp (ENSSFOG00015008977) #28 fam53b (ENSSFOG00015028133) #29 abraxas2 (ENSSFOG00015008897) #32 hpdl (ENSSFOG00015024455) ZRANB1 (ENSSFOG00015008836) #34 CTBP2 (ENSSFOG00015031457) #35 mmp21 (ENSSFOG00015008730) uros (ENSSFOG00015008698) bccip (ENSSFOG00015028323) dhx32a (ENSSFOG00015008596) ADAM12 (ENSSFOG00015008550) Clupeocephala ANCESTRAL SPECIES 73 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.d.a.a.a #23 ENSGT00730000114509 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g Euteleosteomorpha ANCESTRAL SPECIES 56 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.d.a.a.a #23 ENSGT00730000114509 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g Acanthomorphata ANCESTRAL SPECIES 12 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.d.a.a.a #23 ENSGT00730000114509 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000168551 ENSGT00940000166669.b ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000159140.d ENSGT00390000009853 Cod MODERN SPECIES 9 ENSGMOG00000034198 lrit1b (ENSGMOG00000027227) rgrb (ENSGMOG00000008610) slc18a3b (ENSGMOG00000019848) ENSGMOG00000008619 ENSGMOG00000008630 ENSGMOG00000034729 ENSGMOG00000008643 PSTK (ENSGMOG00000008669) #17 ENSGMOG00000029424 ENSGMOG00000036756 ENSGMOG00000026458 IKZF5 (ENSGMOG00000035925) #18 ACADSB (ENSGMOG00000019024) #19 HMX3 (ENSGMOG00000019034) #20 bub3 (ENSGMOG00000019042) #22 ENSGMOG00000025981 GPR26 (ENSGMOG00000019051) #23 CPXM2 (ENSGMOG00000019057) #24 CHST15 (ENSGMOG00000027306) #25 oat (ENSGMOG00000016188) #26 lhpp (ENSGMOG00000016219) #28 fam53b (ENSGMOG00000023221) #29 hpdl (ENSGMOG00000016244) ZRANB1 (ENSGMOG00000016259) #34 CTBP2 (ENSGMOG00000015768) #35 bccip (ENSGMOG00000026112) DHX32 (ENSGMOG00000002501) ENSGMOG00000009161 ENSGMOG00000022739 ENSGMOG00000008545 Euacanthomorphacea ANCESTRAL SPECIES 21 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.d.a.a.a #23 ENSGT00730000114509 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g Pinecone sodierfish MODERN SPECIES 10 ENSMMDG00005024603 ENSMMDG00005024604 ENSMMDG00005024605 CHRM3 (ENSMMDG00005024606) FMN2 (ENSMMDG00005024607) csnk1e (ENSMMDG00005024608) tmem184ba (ENSMMDG00005024622) maff (ENSMMDG00005024623) tomm22 (ENSMMDG00005024624) dmc1 (ENSMMDG00005024625) gspt1 (ENSMMDG00005024640) rsl1d1 (ENSMMDG00005024721) ENSMMDG00005024724 ACADSB (ENSMMDG00005024725) #19 HMX3 (ENSMMDG00005024726) #20 bub3 (ENSMMDG00005024727) #22 GPR26 (ENSMMDG00005024728) #23 CPXM2 (ENSMMDG00005024729) #24 CHST15 (ENSMMDG00005024730) #25 oat (ENSMMDG00005024731) #26 lhpp (ENSMMDG00005024732) #28 fam53b (ENSMMDG00005024733) #29 hpdl (ENSMMDG00005024734) ZRANB1 (ENSMMDG00005024735) #34 CTBP2 (ENSMMDG00005024736) #35 mmp21 (ENSMMDG00005024737) uros (ENSMMDG00005024738) bccip (ENSMMDG00005024739) dhx32a (ENSMMDG00005024740) FANK1 (ENSMMDG00005024741) ADAM12 (ENSMMDG00005024742) Percomorphaceae ANCESTRAL SPECIES 21 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.d.a.a.a #23 ENSGT00730000114509 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g Tiger tail seahorse MODERN SPECIES 330 fbxl15 (ENSHCOG00000019722) pax2b (ENSHCOG00000019743) chst3b (ENSHCOG00000019760) GHITM (ENSHCOG00000019768) ENSHCOG00000019831 CHAT (ENSHCOG00000019914) slc18a3b (ENSHCOG00000019932) rgrb (ENSHCOG00000019964) lrit1b (ENSHCOG00000019974) CDHR1 (ENSHCOG00000020016) zgc:174164 (ENSHCOG00000020047) PSTK (ENSHCOG00000020127) #17 IKZF5 (ENSHCOG00000020134) #18 ACADSB (ENSHCOG00000020163) #19 HMX3 (ENSHCOG00000020178) #20 bub3 (ENSHCOG00000020184) #22 GPR26 (ENSHCOG00000020193) #23 CPXM2 (ENSHCOG00000020211) #24 RAB5C (ENSHCOG00000020238) ENSHCOG00000020248 DNAJC7 (ENSHCOG00000020290) aclya (ENSHCOG00000020343) ENSHCOG00000020376 becn1 (ENSHCOG00000020402) ENSHCOG00000020464 ENSHCOG00000020481 ENSHCOG00000020491 PHOSPHO1 (ENSHCOG00000020497) ENSHCOG00000020516 fkbp10b (ENSHCOG00000020574) cpn1 (ENSHCOG00000020689) Percomorphaceae_B ANCESTRAL SPECIES 23 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00730000114509 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000171352 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g Ovalentaria ANCESTRAL SPECIES 13 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00730000114509 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000171352 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g Atherinomorphae ANCESTRAL SPECIES 10 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00730000114509 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g Oryzias ANCESTRAL SPECIES 11 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a Oryzias_a ANCESTRAL SPECIES 17 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a Chinese medaka MODERN SPECIES 1099 pax2b (ENSOSIG00000014974) chst3b (ENSOSIG00000015064) GHITM (ENSOSIG00000015065) CDHR1 (ENSOSIG00000015077) LRIT2 (ENSOSIG00000016120) lrit1b (ENSOSIG00000016122) rgrb (ENSOSIG00000016123) slc18a3b (ENSOSIG00000016124) CHAT (ENSOSIG00000016128) ENSOSIG00000016669 zgc:174164 (ENSOSIG00000016672) PSTK (ENSOSIG00000016677) #17 IKZF5 (ENSOSIG00000016680) #18 ACADSB (ENSOSIG00000016685) #19 HMX3 (ENSOSIG00000016807) #20 bub3 (ENSOSIG00000016813) #22 GPR26 (ENSOSIG00000016816) #23 CPXM2 (ENSOSIG00000016835) #24 CHST15 (ENSOSIG00000016934) #25 oat (ENSOSIG00000016955) #26 lhpp (ENSOSIG00000017246) #28 fam53b (ENSOSIG00000017249) #29 hpdl (ENSOSIG00000017250) ZRANB1 (ENSOSIG00000017251) #34 ENSOSIG00000017255 mmp21 (ENSOSIG00000017266) bccip (ENSOSIG00000017300) dhx32a (ENSOSIG00000017305) ADAM12 (ENSOSIG00000017517) dock1 (ENSOSIG00000018381) INSYN2A (ENSOSIG00000018441) Japanese Medaka HdrR MODERN SPECIES 10 ENSORLG00000029928 chst3b (ENSORLG00000009328) GHITM (ENSORLG00000009358) CDHR1 (ENSORLG00000009394) LRIT2 (ENSORLG00000009406) lrit1b (ENSORLG00000009414) rgrb (ENSORLG00000009433) slc18a3b (ENSORLG00000009439) CHAT (ENSORLG00000009452) ENSORLG00000009463 zgc:174164 (ENSORLG00000009489) PSTK (ENSORLG00000009501) #17 IKZF5 (ENSORLG00000030579) #18 ACADSB (ENSORLG00000009544) #19 HMX3 (ENSORLG00000009549) #20 bub3 (ENSORLG00000009565) #22 GPR26 (ENSORLG00000009582) #23 CPXM2 (ENSORLG00000009590) #24 CHST15 (ENSORLG00000009599) #25 oat (ENSORLG00000009625) #26 lhpp (ENSORLG00000009657) #28 fam53b (ENSORLG00000009669) #29 hpdl (ENSORLG00000009680) ZRANB1 (ENSORLG00000009697) #34 CTBP2 (ENSORLG00000009718) #35 ENSORLG00000024613 mmp21 (ENSORLG00000030297) uros (ENSORLG00000009747) bccip (ENSORLG00000029153) dhx32a (ENSORLG00000009790) ADAM12 (ENSORLG00000009815) Oryzias_b ANCESTRAL SPECIES 9 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a Indian medaka MODERN SPECIES 17 pax2b (ENSOMEG00000011620) chst3b (ENSOMEG00000011589) GHITM (ENSOMEG00000011580) CDHR1 (ENSOMEG00000011565) LRIT2 (ENSOMEG00000011543) lrit1b (ENSOMEG00000011538) rgrb (ENSOMEG00000011526) slc18a3b (ENSOMEG00000011513) CHAT (ENSOMEG00000000969) ENSOMEG00000011457 zgc:174164 (ENSOMEG00000011351) PSTK (ENSOMEG00000011301) #17 IKZF5 (ENSOMEG00000011314) #18 ACADSB (ENSOMEG00000011281) #19 HMX3 (ENSOMEG00000011254) #20 bub3 (ENSOMEG00000011241) #22 GPR26 (ENSOMEG00000011202) #23 CPXM2 (ENSOMEG00000011183) #24 CHST15 (ENSOMEG00000011121) #25 oat (ENSOMEG00000011081) #26 lhpp (ENSOMEG00000011048) #28 fam53b (ENSOMEG00000011007) #29 hpdl (ENSOMEG00000010990) ZRANB1 (ENSOMEG00000010975) #34 ENSOMEG00000010921 mmp21 (ENSOMEG00000010850) uros (ENSOMEG00000010827) bccip (ENSOMEG00000010778) dhx32a (ENSOMEG00000010746) ADAM12 (ENSOMEG00000010655) dock1 (ENSOMEG00000010526) Javanese ricefish MODERN SPECIES 10 pax2b (ENSOJAG00000020788) chst3b (ENSOJAG00000020948) GHITM (ENSOJAG00000020952) ENSOJAG00000020993 LRIT2 (ENSOJAG00000021220) lrit1b (ENSOJAG00000021226) rgrb (ENSOJAG00000021233) slc18a3b (ENSOJAG00000021247) CHAT (ENSOJAG00000021268) ENSOJAG00000021280 ENSOJAG00000021297 PSTK (ENSOJAG00000021416) #17 IKZF5 (ENSOJAG00000021430) #18 ACADSB (ENSOJAG00000021437) #19 HMX3 (ENSOJAG00000021496) #20 bub3 (ENSOJAG00000021510) #22 GPR26 (ENSOJAG00000021528) #23 CPXM2 (ENSOJAG00000021555) #24 CHST15 (ENSOJAG00000021714) #25 oat (ENSOJAG00000021724) #26 lhpp (ENSOJAG00000021793) #28 fam53b (ENSOJAG00000021808) #29 hpdl (ENSOJAG00000021824) ZRANB1 (ENSOJAG00000021830) #34 CTBP2 (ENSOJAG00000021893) #35 mmp21 (ENSOJAG00000022184) uros (ENSOJAG00000022219) bccip (ENSOJAG00000022231) ADAM12 (ENSOJAG00000022277) ENSOJAG00000022470 ENSOJAG00000011978 Cyprinodontiformes ANCESTRAL SPECIES 13 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00730000114509 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a Aplocheiloidei ANCESTRAL SPECIES 4 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000155495.C.a.a ENSGT00530000063787.B.d.a ENSGT00940000154974 Turquoise killifish MODERN SPECIES 1621 ENSNFUG00015008653 pax2b (ENSNFUG00015008602) chst3b (ENSNFUG00015008571) GHITM (ENSNFUG00015008559) CDHR1 (ENSNFUG00015007780) lrit1b (ENSNFUG00015007685) rgrb (ENSNFUG00015007674) CHAT (ENSNFUG00015007656) ENSNFUG00015007652 ENSNFUG00015007579 zgc:174164 (ENSNFUG00015007507) PSTK (ENSNFUG00015007485) #17 Nfu_g_1_023152 (ENSNFUG00015007479) #18 ACADSB (ENSNFUG00015007424) #19 HMX3 (ENSNFUG00015007406) #20 BUB3 (ENSNFUG00015007398) #22 GPR26 (ENSNFUG00015007392) #23 CABZ01090975.1 (ENSNFUG00015024193) #24 ENSNFUG00015024168 DNALI1 (ENSNFUG00015024163) CHST15 (ENSNFUG00015024160) #25 OAT (ENSNFUG00015024148) #26 lhpp (ENSNFUG00015024143) #28 FAM53B (ENSNFUG00015024141) #29 HPDL (ENSNFUG00015024139) ZRANB1 (ENSNFUG00015024124) #34 ENSNFUG00015024032 ADAM12 (ENSNFUG00015023387) ENSNFUG00015023339 FAM196A (ENSNFUG00015023337) dock1 (ENSNFUG00015022465) Mangrove rivulus MODERN SPECIES 4 pax2b (ENSKMAG00000014284) chst3b (ENSKMAG00000014250) GHITM (ENSKMAG00000014215) CDHR1 (ENSKMAG00000014173) LRIT2 (ENSKMAG00000014142) lrit1b (ENSKMAG00000014114) rgrb (ENSKMAG00000014090) slc18a3b (ENSKMAG00000014075) CHAT (ENSKMAG00000014027) ENSKMAG00000013972 zgc:174164 (ENSKMAG00000013918) PSTK (ENSKMAG00000013892) #17 IKZF5 (ENSKMAG00000013872) #18 ACADSB (ENSKMAG00000013836) #19 HMX3 (ENSKMAG00000013830) #20 bub3 (ENSKMAG00000013809) #22 GPR26 (ENSKMAG00000013799) #23 CPXM2 (ENSKMAG00000013770) #24 CHST15 (ENSKMAG00000013712) #25 oat (ENSKMAG00000013673) #26 lhpp (ENSKMAG00000013643) #28 fam53b (ENSKMAG00000013624) #29 hpdl (ENSKMAG00000013534) ZRANB1 (ENSKMAG00000013496) #34 CTBP2 (ENSKMAG00000013423) #35 mmp21 (ENSKMAG00000013383) uros (ENSKMAG00000013364) bccip (ENSKMAG00000013341) ADAM12 (ENSKMAG00000013300) INSYN2A (ENSKMAG00000013278) dock1 (ENSKMAG00000012961) Cyprinodontoidei ANCESTRAL SPECIES 17 ENSGT00390000003595 ENSGT01080000257365.a.d ENSGT01030000234586.B.a.a.a ENSGT00940000157836.b ENSGT00950000182983.A.a.a.b ENSGT00940000160948 ENSGT00950000182961.a.a.c ENSGT00390000003596 ENSGT00390000013260.B ENSGT01050000244965.a.a ENSGT01030000234578.A.b.a.a.a.a.a ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00730000114509 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000169101 ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 Poeciliinae ANCESTRAL SPECIES 10 ENSGT00390000003595 ENSGT01080000257365.a.d ENSGT01030000234586.B.a.a.a ENSGT00940000157836.b ENSGT00950000182983.A.a.a.b ENSGT00940000160948 ENSGT00950000182961.a.a.c ENSGT00390000003596 ENSGT00390000013260.B ENSGT01050000244965.a.a ENSGT01030000234578.A.b.a.a.a.a.a ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00730000114509 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000169101 ENSGT00940000154430.c.a #35 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g Poecilia ANCESTRAL SPECIES 15 ENSGT00390000003595 ENSGT01080000257365.a.d ENSGT01030000234586.B.a.a.a ENSGT00940000157836.b ENSGT00950000182983.A.a.a.b ENSGT00940000160948 ENSGT00950000182961.a.a.c ENSGT00390000003596 ENSGT00390000013260.B ENSGT01050000244965.a.a ENSGT01030000234578.A.b.a.a.a.a.a ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00730000114509 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000169101 ENSGT00940000154430.c.a #35 ENSGT00940000171352 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 NAME_6 ANCESTRAL SPECIES ENSGT00390000003595 ENSGT01080000257365.a.d ENSGT01030000234586.B.a.a.a ENSGT00940000157836.b ENSGT00950000182983.A.a.a.b ENSGT00940000160948 ENSGT00950000182961.a.a.c ENSGT00390000003596 ENSGT00390000013260.B ENSGT01050000244965.a.a ENSGT01030000234578.A.b.a.a.a.a.a ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00730000114509 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000169101 ENSGT00940000154430.c.a #35 ENSGT00940000171352 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g Amazon molly MODERN SPECIES 259 kcnj2a (ENSPFOG00000020437) BTBD17 (ENSPFOG00000012121) GPR142 (ENSPFOG00000012115) map2k6 (ENSPFOG00000011774) BTBD17 (ENSPFOG00000011760) GPR142 (ENSPFOG00000011754) gprc5c (ENSPFOG00000011734) ENSPFOG00000020436 pde6gb (ENSPFOG00000011732) ENSPFOG00000011711 ENSPFOG00000011678 PSTK (ENSPFOG00000011595) #17 IKZF5 (ENSPFOG00000011572) #18 ACADSB (ENSPFOG00000011496) #19 HMX3 (ENSPFOG00000011482) #20 bub3 (ENSPFOG00000011421) #22 ENSPFOG00000022326 GPR26 (ENSPFOG00000011400) #23 CPXM2 (ENSPFOG00000011220) #24 CHST15 (ENSPFOG00000011179) #25 oat (ENSPFOG00000011095) #26 lhpp (ENSPFOG00000011062) #28 fam53b (ENSPFOG00000011033) #29 hpdl (ENSPFOG00000010991) ENSPFOG00000010897 ENSPFOG00000010606 mmp21 (ENSPFOG00000010508) uros (ENSPFOG00000010471) bccip (ENSPFOG00000010449) mmp21 (ENSPFOG00000023394) UROS (ENSPFOG00000010392) Sailfin molly MODERN SPECIES 471 kcnj2a (ENSPLAG00000008193) map2k6 (ENSPLAG00000008209) BTBD17 (ENSPLAG00000008223) GPR142 (ENSPLAG00000008253) gprc5c (ENSPLAG00000008262) ENSPLAG00000008267 pde6gb (ENSPLAG00000008588) ENSPLAG00000008637 ENSPLAG00000008654 PSTK (ENSPLAG00000008667) #17 IKZF5 (ENSPLAG00000008675) #18 ACADSB (ENSPLAG00000008705) #19 HMX3 (ENSPLAG00000008717) #20 bub3 (ENSPLAG00000008730) #22 GPR26 (ENSPLAG00000008754) #23 CPXM2 (ENSPLAG00000008785) #24 CHST15 (ENSPLAG00000008815) #25 Guppy MODERN SPECIES 449 galr2a (ENSPREG00000007578) KCNJ16 (ENSPREG00000007555) kcnj2a (ENSPREG00000007547) map2k6 (ENSPREG00000007511) BTBD17 (ENSPREG00000007493) GPR142 (ENSPREG00000007479) gprc5c (ENSPREG00000007467) ENSPREG00000007448 pde6gb (ENSPREG00000007437) ENSPREG00000007371 ENSPREG00000007351 PSTK (ENSPREG00000007335) #17 IKZF5 (ENSPREG00000007320) #18 ACADSB (ENSPREG00000007280) #19 HMX3 (ENSPREG00000007254) #20 bub3 (ENSPREG00000007234) #22 GPR26 (ENSPREG00000007214) #23 CPXM2 (ENSPREG00000007148) #24 CHST15 (ENSPREG00000007056) #25 oat (ENSPREG00000006997) #26 lhpp (ENSPREG00000006958) #28 fam53b (ENSPREG00000006943) #29 hpdl (ENSPREG00000006930) ENSPREG00000006907 ENSPREG00000006829 mmp21 (ENSPREG00000006771) uros (ENSPREG00000006720) bccip (ENSPREG00000006691) dhx32a (ENSPREG00000006556) ADAM12 (ENSPREG00000006491) INSYN2A (ENSPREG00000006465) Platyfish MODERN SPECIES 1 galr2a (ENSXMAG00000016747) KCNJ16 (ENSXMAG00000016746) kcnj2a (ENSXMAG00000019862) map2k6 (ENSXMAG00000016710) BTBD17 (ENSXMAG00000016708) GPR142 (ENSXMAG00000022856) gprc5c (ENSXMAG00000016702) ENSXMAG00000016697 pde6gb (ENSXMAG00000016693) ENSXMAG00000021238 ENSXMAG00000016672 PSTK (ENSXMAG00000023548) #17 IKZF5 (ENSXMAG00000016661) #18 ACADSB (ENSXMAG00000016640) #19 HMX3 (ENSXMAG00000028551) #20 bub3 (ENSXMAG00000016612) #22 GPR26 (ENSXMAG00000016606) #23 CPXM2 (ENSXMAG00000016574) #24 CHST15 (ENSXMAG00000016569) #25 oat (ENSXMAG00000016554) #26 lhpp (ENSXMAG00000016538) #28 fam53b (ENSXMAG00000016533) #29 hpdl (ENSXMAG00000000449) ENSXMAG00000029327 ENSXMAG00000019860 mmp21 (ENSXMAG00000016521) uros (ENSXMAG00000016520) bccip (ENSXMAG00000029181) dhx32a (ENSXMAG00000016496) ADAM12 (ENSXMAG00000016474) INSYN2A (ENSXMAG00000016473) NAME_4 DUPLICATION NAME_4 ANCESTRAL SPECIES ENSGT00950000183091.A.a.s #22 Sheepshead minnow MODERN SPECIES 398 ENSCVAG00000016539 KCNJ16 (ENSCVAG00000016544) kcnj2a (ENSCVAG00000016584) map2k6 (ENSCVAG00000016632) BTBD17 (ENSCVAG00000016643) GPR142 (ENSCVAG00000016678) gprc5c (ENSCVAG00000016688) ENSCVAG00000016691 pde6gb (ENSCVAG00000016703) ENSCVAG00000016724 ENSCVAG00000016730 PSTK (ENSCVAG00000016735) #17 IKZF5 (ENSCVAG00000016757) #18 ACADSB (ENSCVAG00000016804) #19 HMX3 (ENSCVAG00000016810) #20 bub3 (ENSCVAG00000016815) #22 GPR26 (ENSCVAG00000016830) #23 CPXM2 (ENSCVAG00000016846) #24 CHST15 (ENSCVAG00000016878) #25 oat (ENSCVAG00000016925) #26 lhpp (ENSCVAG00000016958) #28 fam53b (ENSCVAG00000016970) #29 hpdl (ENSCVAG00000016979) ENSCVAG00000017030 CTBP2 (ENSCVAG00000017073) #35 NAME_4 ANCESTRAL SPECIES 22 ENSGT00390000003595 ENSGT01080000257365.a.d ENSGT01030000234586.B.a.a.a ENSGT00940000157836.b ENSGT00950000182983.A.a.a.b ENSGT00940000160948 ENSGT00950000182961.a.a.c ENSGT00390000003596 ENSGT00390000013260.B ENSGT01050000244965.a.a ENSGT01030000234578.A.b.a.a.a.a.a ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a.t #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000169101 ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 31 ENSCVAG00000022197 #22 Sheepshead minnow MODERN SPECIES 30 ENSCVAG00000022211 #22 Mummichog MODERN SPECIES 2198 exoc7 (ENSFHEG00000010965) galr2a (ENSFHEG00000010996) KCNJ16 (ENSFHEG00000011006) kcnj2a (ENSFHEG00000011010) map2k6 (ENSFHEG00000011061) BTBD17 (ENSFHEG00000011088) GPR142 (ENSFHEG00000011122) gprc5c (ENSFHEG00000011143) pde6gb (ENSFHEG00000011161) zgc:92749 (ENSFHEG00000011166) ENSFHEG00000011216 PSTK (ENSFHEG00000011224) #17 IKZF5 (ENSFHEG00000011230) #18 ACADSB (ENSFHEG00000011258) #19 HMX3 (ENSFHEG00000011279) #20 bub3 (ENSFHEG00000011308) #22 GPR26 (ENSFHEG00000011333) #23 CPXM2 (ENSFHEG00000011390) #24 CHST15 (ENSFHEG00000011449) #25 oat (ENSFHEG00000011494) #26 lhpp (ENSFHEG00000011529) #28 fam53b (ENSFHEG00000011563) #29 hpdl (ENSFHEG00000011584) ENSFHEG00000011604 ZRANB1 (ENSFHEG00000011656) #34 CTBP2 (ENSFHEG00000011695) #35 mmp21 (ENSFHEG00000011740) uros (ENSFHEG00000011776) bccip (ENSFHEG00000011800) ADAM12 (ENSFHEG00000011836) dock1 (ENSFHEG00000011910) Ovalentaria_B ANCESTRAL SPECIES 21 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000171352 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g Cichlidae ANCESTRAL SPECIES 15 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000154974 Pseudocrenilabrinae ANCESTRAL SPECIES 9 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115.e ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00530000063787.B.d.a Nile tilapia MODERN SPECIES 20 chst3 (ENSONIG00000016064) GHITM (ENSONIG00000016060) CDHR1 (ENSONIG00000016056) LRIT2 (ENSONIG00000016055) lrit1b (ENSONIG00000016054) rgrb (ENSONIG00000039506) slc18a3b (ENSONIG00000020662) CHAT (ENSONIG00000016047) ENSONIG00000040667 ENSONIG00000016045 zgc:174164 (ENSONIG00000016041) PSTK (ENSONIG00000016039) #17 IKZF5 (ENSONIG00000016036) #18 ACADSB (ENSONIG00000016035) #19 HMX3 (ENSONIG00000016033) #20 bub3 (ENSONIG00000016031) #22 GPR26 (ENSONIG00000016030) #23 CPXM2 (ENSONIG00000016028) #24 CHST15 (ENSONIG00000016026) #25 oat (ENSONIG00000016022) #26 lhpp (ENSONIG00000032849) #28 fam53b (ENSONIG00000016021) #29 hpdl (ENSONIG00000016018) ENSONIG00000016012 ZRANB1 (ENSONIG00000016016) #34 mmp21 (ENSONIG00000016009) uros (ENSONIG00000042838) bccip (ENSONIG00000016006) dhx32a (ENSONIG00000016005) ADAM12 (ENSONIG00000015999) INSYN2A (ENSONIG00000015997) Pseudocrenilabrinae_A ANCESTRAL SPECIES 7 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115.e ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000154974 Haplochromini ANCESTRAL SPECIES 17 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115.e ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000154974 Burton s mouthbrooder MODERN SPECIES 300 fbxl15 (ENSHBUG00000018679) pax2b (ENSHBUG00000018765) chst3b (ENSHBUG00000018774) GHITM (ENSHBUG00000018825) CDHR1 (ENSHBUG00000018837) LRIT2 (ENSHBUG00000018840) lrit1b (ENSHBUG00000018859) rgrb (ENSHBUG00000018903) CHAT (ENSHBUG00000018954) ENSHBUG00000019066 zgc:174164 (ENSHBUG00000019084) PSTK (ENSHBUG00000019103) #17 IKZF5 (ENSHBUG00000019115) #18 ACADSB (ENSHBUG00000019144) #19 HMX3 (ENSHBUG00000019151) #20 bub3 (ENSHBUG00000019161) #22 GPR26 (ENSHBUG00000019192) #23 CPXM2 (ENSHBUG00000019241) #24 CHST15 (ENSHBUG00000019250) #25 oat (ENSHBUG00000019260) #26 lhpp (ENSHBUG00000019306) #28 fam53b (ENSHBUG00000019315) #29 hpdl (ENSHBUG00000019326) ZRANB1 (ENSHBUG00000019365) #34 ENSHBUG00000019483 mmp21 (ENSHBUG00000019529) uros (ENSHBUG00000019555) bccip (ENSHBUG00000019589) dhx32a (ENSHBUG00000019742) ADAM12 (ENSHBUG00000019769) INSYN2A (ENSHBUG00000019788) Haplochromini_A ANCESTRAL SPECIES 16 ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115.f ENSGT00940000166115.e ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000154974 P. nyererei MODERN SPECIES 364 pax2b (ENSPNYG00000000368) chst3b (ENSPNYG00000000372) GHITM (ENSPNYG00000000379) CDHR1 (ENSPNYG00000000393) LRIT2 (ENSPNYG00000000441) lrit1b (ENSPNYG00000000450) rgrb (ENSPNYG00000000461) slc18a3b (ENSPNYG00000000470) CHAT (ENSPNYG00000000475) ENSPNYG00000000503 zgc:174164 (ENSPNYG00000000567) PSTK (ENSPNYG00000001218) #17 IKZF5 (ENSPNYG00000001264) #18 ACADSB (ENSPNYG00000001269) #19 HMX3 (ENSPNYG00000001279) #20 bub3 (ENSPNYG00000001307) #22 GPR26 (ENSPNYG00000001315) #23 CPXM2 (ENSPNYG00000001329) #24 CHST15 (ENSPNYG00000001363) #25 oat (ENSPNYG00000001381) #26 lhpp (ENSPNYG00000001387) #28 fam53b (ENSPNYG00000001399) #29 hpdl (ENSPNYG00000001407) ZRANB1 (ENSPNYG00000001475) #34 ENSPNYG00000001515 mmp21 (ENSPNYG00000001575) uros (ENSPNYG00000001614) bccip (ENSPNYG00000001654) dhx32a (ENSPNYG00000001703) ADAM12 (ENSPNYG00000001858) dock1 (ENSPNYG00000002157) Haplochromini_B ANCESTRAL SPECIES 15 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115.f ENSGT00940000166115.e ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000154974 Eastern happy MODERN SPECIES 20 pax2b (ENSACLG00000004582) chst3b (ENSACLG00000004566) GHITM (ENSACLG00000004515) CDHR1 (ENSACLG00000004438) LRIT2 (ENSACLG00000004428) lrit1b (ENSACLG00000004405) rgrb (ENSACLG00000004374) CHAT (ENSACLG00000004310) ENSACLG00000004222 ENSACLG00000004188 zgc:174164 (ENSACLG00000004153) PSTK (ENSACLG00000004141) #17 IKZF5 (ENSACLG00000004134) #18 ACADSB (ENSACLG00000004110) #19 HMX3 (ENSACLG00000004101) #20 bub3 (ENSACLG00000004091) #22 GPR26 (ENSACLG00000004083) #23 CPXM2 (ENSACLG00000004067) #24 CHST15 (ENSACLG00000004040) #25 ENSACLG00000004032 oat (ENSACLG00000004022) #26 lhpp (ENSACLG00000004011) #28 fam53b (ENSACLG00000004008) #29 hpdl (ENSACLG00000003946) ZRANB1 (ENSACLG00000003903) #34 ENSACLG00000003829 mmp21 (ENSACLG00000003816) uros (ENSACLG00000003787) bccip (ENSACLG00000003741) dhx32a (ENSACLG00000003726) ADAM12 (ENSACLG00000003663) Zebra mbuna MODERN SPECIES 1111 pax2b (ENSMZEG00005001188) chst3b (ENSMZEG00005001207) GHITM (ENSMZEG00005001212) CDHR1 (ENSMZEG00005001218) LRIT2 (ENSMZEG00005001262) lrit1b (ENSMZEG00005001280) rgrb (ENSMZEG00005001295) CHAT (ENSMZEG00005001337) ENSMZEG00005001350 zgc:174164 (ENSMZEG00005001386) zgc:174164 (ENSMZEG00005001420) IKZF5 (ENSMZEG00005001432) #18 PSTK (ENSMZEG00005001430) #17 ACADSB (ENSMZEG00005001437) #19 HMX3 (ENSMZEG00005001465) #20 bub3 (ENSMZEG00005001489) #22 GPR26 (ENSMZEG00005001499) #23 CPXM2 (ENSMZEG00005001518) #24 CHST15 (ENSMZEG00005001525) #25 oat (ENSMZEG00005001530) #26 lhpp (ENSMZEG00005001542) #28 fam53b (ENSMZEG00005001571) #29 hpdl (ENSMZEG00005001580) ZRANB1 (ENSMZEG00005001639) #34 ENSMZEG00005001655 mmp21 (ENSMZEG00005001717) uros (ENSMZEG00005001738) bccip (ENSMZEG00005001767) dhx32a (ENSMZEG00005001790) ADAM12 (ENSMZEG00005001803) dock1 (ENSMZEG00005001868) Lyretail cichlid MODERN SPECIES 309 pax2b (ENSNBRG00000013660) chst3b (ENSNBRG00000013630) GHITM (ENSNBRG00000013602) CDHR1 (ENSNBRG00000013530) LRIT2 (ENSNBRG00000013521) lrit1b (ENSNBRG00000013509) rgrb (ENSNBRG00000013487) slc18a3b (ENSNBRG00000013479) CHAT (ENSNBRG00000013444) ENSNBRG00000013385 zgc:174164 (ENSNBRG00000013344) PSTK (ENSNBRG00000013328) #17 ENSNBRG00000013318 #18 ACADSB (ENSNBRG00000013292) #19 HMX3 (ENSNBRG00000013278) #20 bub3 (ENSNBRG00000013223) #22 GPR26 (ENSNBRG00000013210) #23 ENSNBRG00000013197 #24 CPXM2 (ENSNBRG00000013173) #24 CHST15 (ENSNBRG00000013154) #25 oat (ENSNBRG00000013133) #26 lhpp (ENSNBRG00000013107) #28 fam53b (ENSNBRG00000013091) #29 hpdl (ENSNBRG00000013072) ZRANB1 (ENSNBRG00000013030) #34 ENSNBRG00000012997 mmp21 (ENSNBRG00000012962) uros (ENSNBRG00000012750) bccip (ENSNBRG00000012591) dhx32a (ENSNBRG00000012459) ADAM12 (ENSNBRG00000012394) Midas cichlid MODERN SPECIES 518 chst3b (ENSACIG00000024526) ENSACIG00000024527 GHITM (ENSACIG00000024528) CDHR1 (ENSACIG00000024529) LRIT2 (ENSACIG00000000185) lrit1b (ENSACIG00000000211) rgrb (ENSACIG00000000234) slc18a3b (ENSACIG00000000258) CHAT (ENSACIG00000000278) ENSACIG00000000346 zgc:174164 (ENSACIG00000000458) ENSACIG00000000682 #17 ACADSB (ENSACIG00000000707) #19 IKZF5 (ENSACIG00000000747) #18 HMX3 (ENSACIG00000000760) #20 bub3 (ENSACIG00000000792) #22 GPR26 (ENSACIG00000000816) #23 CPXM2 (ENSACIG00000000845) #24 CHST15 (ENSACIG00000000886) #25 oat (ENSACIG00000000939) #26 lhpp (ENSACIG00000000967) #28 fam53b (ENSACIG00000000993) #29 hpdl (ENSACIG00000001011) ENSACIG00000001077 ENSACIG00000001102 ENSACIG00000001148 mmp21 (ENSACIG00000001160) uros (ENSACIG00000001192) bccip (ENSACIG00000001411) dhx32a (ENSACIG00000001436) ADAM12 (ENSACIG00000001512) Pomacentridae ANCESTRAL SPECIES 13 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000154974 Pomacentridae_A ANCESTRAL SPECIES 11 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000171352 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a Amphiprion ANCESTRAL SPECIES 78 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000171352 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000154974 Clown anemonefish MODERN SPECIES 2145 CADM1 (ENSAOCG00000017315) chst3b (ENSAOCG00000017299) GHITM (ENSAOCG00000017290) CDHR1 (ENSAOCG00000017267) LRIT2 (ENSAOCG00000017178) lrit1b (ENSAOCG00000017149) rgrb (ENSAOCG00000017134) slc18a3b (ENSAOCG00000017106) CHAT (ENSAOCG00000017080) ENSAOCG00000001917 zgc:174164 (ENSAOCG00000016879) PSTK (ENSAOCG00000016851) #17 IKZF5 (ENSAOCG00000016841) #18 ACADSB (ENSAOCG00000016822) #19 HMX3 (ENSAOCG00000016814) #20 bub3 (ENSAOCG00000016783) #22 GPR26 (ENSAOCG00000016774) #23 Orange clownfish MODERN SPECIES 10 pax2b (ENSAPEG00000020067) chst3b (ENSAPEG00000020096) GHITM (ENSAPEG00000020099) CDHR1 (ENSAPEG00000020116) LRIT2 (ENSAPEG00000020135) lrit1b (ENSAPEG00000020146) rgrb (ENSAPEG00000020167) slc18a3b (ENSAPEG00000020196) CHAT (ENSAPEG00000020225) ENSAPEG00000020279 zgc:174164 (ENSAPEG00000020295) IKZF5 (ENSAPEG00000020319) #18 PSTK (ENSAPEG00000020330) #17 ACADSB (ENSAPEG00000020355) #19 HMX3 (ENSAPEG00000020373) #20 bub3 (ENSAPEG00000020387) #22 GPR26 (ENSAPEG00000020399) #23 ENSAPEG00000020415 #24 CPXM2 (ENSAPEG00000020437) #24 CHST15 (ENSAPEG00000020468) #25 oat (ENSAPEG00000020494) #26 lhpp (ENSAPEG00000020518) #28 fam53b (ENSAPEG00000020547) #29 hpdl (ENSAPEG00000020554) ZRANB1 (ENSAPEG00000020565) #34 ENSAPEG00000020611 mmp21 (ENSAPEG00000020650) bccip (ENSAPEG00000020684) dhx32a (ENSAPEG00000020721) ADAM12 (ENSAPEG00000020789) dock1 (ENSAPEG00000021059) Spiny chromis MODERN SPECIES 95 pax2b (ENSAPOG00000018555) chst3b (ENSAPOG00000018567) GHITM (ENSAPOG00000018575) CDHR1 (ENSAPOG00000018741) LRIT2 (ENSAPOG00000018764) lrit1b (ENSAPOG00000018811) rgrb (ENSAPOG00000018847) slc18a3b (ENSAPOG00000018855) CHAT (ENSAPOG00000000695) PARG (ENSAPOG00000018989) zgc:174164 (ENSAPOG00000019065) PSTK (ENSAPOG00000019096) #17 IKZF5 (ENSAPOG00000019107) #18 ACADSB (ENSAPOG00000019119) #19 HMX3 (ENSAPOG00000019126) #20 bub3 (ENSAPOG00000019139) #22 GPR26 (ENSAPOG00000019158) #23 CPXM2 (ENSAPOG00000019170) #24 CHST15 (ENSAPOG00000019217) #25 Bicolor damselfish MODERN SPECIES 907 ENSSPAG00000015184 zgc:174164 (ENSSPAG00000015317) PSTK (ENSSPAG00000015344) #17 IKZF5 (ENSSPAG00000015358) #18 ACADSB (ENSSPAG00000015368) #19 HMX3 (ENSSPAG00000015387) #20 bub3 (ENSSPAG00000015401) #22 GPR26 (ENSSPAG00000015418) #23 CPXM2 (ENSSPAG00000015425) #24 CHST15 (ENSSPAG00000015474) #25 oat (ENSSPAG00000015499) #26 lhpp (ENSSPAG00000015531) #28 fam53b (ENSSPAG00000015559) #29 hpdl (ENSSPAG00000015569) ZRANB1 (ENSSPAG00000015578) #34 Percomorphaceae_C ANCESTRAL SPECIES 14 ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000181498 ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000171352 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g Percomorphaceae_D ANCESTRAL SPECIES 13 ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000181498 ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a Carangaria ANCESTRAL SPECIES 13 ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000181498 ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000153123.C.b Carangaria_A ANCESTRAL SPECIES 5 ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000181498 ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000153123.C.b Seriola ANCESTRAL SPECIES 1 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000171352 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g Greater amberjack MODERN SPECIES 27 pax2b (ENSSDUG00000019284) chst3b (ENSSDUG00000019271) GHITM (ENSSDUG00000019264) CDHR1 (ENSSDUG00000019179) LRIT2 (ENSSDUG00000019153) lrit1b (ENSSDUG00000019135) rgrb (ENSSDUG00000019107) slc18a3b (ENSSDUG00000019092) CHAT (ENSSDUG00000019052) PARG (ENSSDUG00000019020) zgc:174164 (ENSSDUG00000018959) PSTK (ENSSDUG00000018928) #17 IKZF5 (ENSSDUG00000018916) #18 ACADSB (ENSSDUG00000018869) #19 HMX3 (ENSSDUG00000018844) #20 bub3 (ENSSDUG00000018820) #22 GPR26 (ENSSDUG00000018800) #23 CPXM2 (ENSSDUG00000018754) #24 ENSSDUG00000018744 CHST15 (ENSSDUG00000018726) #25 oat (ENSSDUG00000018714) #26 lhpp (ENSSDUG00000018675) #28 fam53b (ENSSDUG00000018669) #29 hpdl (ENSSDUG00000018640) ZRANB1 (ENSSDUG00000018599) #34 CTBP2 (ENSSDUG00000018565) #35 mmp21 (ENSSDUG00000018543) uros (ENSSDUG00000017922) bccip (ENSSDUG00000017827) dhx32a (ENSSDUG00000017808) ADAM12 (ENSSDUG00000017759) Yellowtail amberjack MODERN SPECIES 2915 pax2b (ENSSLDG00000024356) chst3b (ENSSLDG00000024381) GHITM (ENSSLDG00000024393) CDHR1 (ENSSLDG00000024408) LRIT2 (ENSSLDG00000024458) lrit1b (ENSSLDG00000024464) rgrb (ENSSLDG00000024471) slc18a3b (ENSSLDG00000024487) CHAT (ENSSLDG00000024498) PARG (ENSSLDG00000024515) zgc:174164 (ENSSLDG00000024535) IKZF5 (ENSSLDG00000024563) #18 PSTK (ENSSLDG00000024559) #17 ACADSB (ENSSLDG00000024567) #19 HMX3 (ENSSLDG00000024585) #20 bub3 (ENSSLDG00000024588) #22 GPR26 (ENSSLDG00000024596) #23 CPXM2 (ENSSLDG00000024612) #24 CHST15 (ENSSLDG00000024623) #25 oat (ENSSLDG00000024637) #26 lhpp (ENSSLDG00000024652) #28 fam53b (ENSSLDG00000024670) #29 hpdl (ENSSLDG00000024675) ZRANB1 (ENSSLDG00000024682) #34 Barramundi perch MODERN SPECIES 135 chst3b (ENSLCAG00010021138) GHITM (ENSLCAG00010021142) ENSLCAG00010021148 CDHR1 (ENSLCAG00010021168) LRIT2 (ENSLCAG00010021190) lrit1b (ENSLCAG00010021192) rgrb (ENSLCAG00010021194) slc18a3b (ENSLCAG00010021199) CHAT (ENSLCAG00010021205) PARG (ENSLCAG00010021225) zgc:174164 (ENSLCAG00010021234) PSTK (ENSLCAG00010021245) #17 IKZF5 (ENSLCAG00010021248) #18 ACADSB (ENSLCAG00010021254) #19 HMX3 (ENSLCAG00010021265) #20 bub3 (ENSLCAG00010021269) #22 GPR26 (ENSLCAG00010021276) #23 CPXM2 (ENSLCAG00010021284) #24 CHST15 (ENSLCAG00010021329) #25 oat (ENSLCAG00010021333) #26 lhpp (ENSLCAG00010021338) #28 fam53b (ENSLCAG00010021342) #29 hpdl (ENSLCAG00010021343) ZRANB1 (ENSLCAG00010021344) #34 CTBP2 (ENSLCAG00010021351) #35 mmp21 (ENSLCAG00010021360) uros (ENSLCAG00010021365) bccip (ENSLCAG00010021371) dhx32a (ENSLCAG00010021376) ADAM12 (ENSLCAG00010021398) ENSLCAG00010021479 Pleuronectoidei ANCESTRAL SPECIES 6 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000154974 Turbot MODERN SPECIES 9 ENSSMAG00000002375 ENSSMAG00000002390 chst3b (ENSSMAG00000028515) GHITM (ENSSMAG00000002453) ENSSMAG00000002468 LRIT2 (ENSSMAG00000002516) ENSSMAG00000002614 rgrb (ENSSMAG00000002538) slc18a3b (ENSSMAG00000002540) ENSSMAG00000002555 ENSSMAG00000002632 PSTK (ENSSMAG00000030355) #17 IKZF5 (ENSSMAG00000031271) #18 ACADSB (ENSSMAG00000002691) #19 HMX3 (ENSSMAG00000002716) #20 bub3 (ENSSMAG00000002740) #22 CPXM2 (ENSSMAG00000002756) #24 lhpp (ENSSMAG00000031510) #28 ENSSMAG00000002854 #25 oat (ENSSMAG00000002903) #26 fam53b (ENSSMAG00000002942) #29 hpdl (ENSSMAG00000002946) ZRANB1 (ENSSMAG00000002965) #34 ENSSMAG00000002995 #35 MMP21 (ENSSMAG00000003080) UROS (ENSSMAG00000003092) bccip (ENSSMAG00000003119) dhx32a (ENSSMAG00000003101) ADAM12 (ENSSMAG00000003145) dock1 (ENSSMAG00000003179) INSYN2A (ENSSMAG00000003452) Tongue sole MODERN SPECIES 18 pax2b (ENSCSEG00000017351) chst3b (ENSCSEG00000017373) GHITM (ENSCSEG00000017385) CDHR1 (ENSCSEG00000017405) LRIT2 (ENSCSEG00000017415) lrit1b (ENSCSEG00000017418) rgrb (ENSCSEG00000017424) slc18a3b (ENSCSEG00000017434) CHAT (ENSCSEG00000017442) ENSCSEG00000017472 zgc:174164 (ENSCSEG00000017493) PSTK (ENSCSEG00000017508) #17 IKZF5 (ENSCSEG00000017519) #18 ACADSB (ENSCSEG00000017522) #19 HMX3 (ENSCSEG00000017529) #20 bub3 (ENSCSEG00000017545) #22 GPR26 (ENSCSEG00000017566) #23 CPXM2 (ENSCSEG00000017573) #24 lhpp (ENSCSEG00000017595) #28 CHST15 (ENSCSEG00000017609) #25 oat (ENSCSEG00000017615) #26 fam53b (ENSCSEG00000017632) #29 ENSCSEG00000017645 kif22 (ENSCSEG00000017655) pagr1 (ENSCSEG00000017686) tlcd3ba (ENSCSEG00000017689) ENSCSEG00000017692 ENSCSEG00000017703 ENSCSEG00000017711 cabp5a (ENSCSEG00000017720) nif3l1 (ENSCSEG00000017744) Anabantaria ANCESTRAL SPECIES 18 ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000181498 ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000153123.C.b Zig-zag eel MODERN SPECIES 10 ENSMAMG00000019289 chst3b (ENSMAMG00000024475) GHITM (ENSMAMG00000025802) CDHR1 (ENSMAMG00000019326) LRIT2 (ENSMAMG00000019343) lrit1b (ENSMAMG00000019368) rgrb (ENSMAMG00000024848) slc18a3b (ENSMAMG00000019391) CHAT (ENSMAMG00000019396) ENSMAMG00000019421 ENSMAMG00000019436 PSTK (ENSMAMG00000019459) #17 IKZF5 (ENSMAMG00000026442) #18 ACADSB (ENSMAMG00000019465) #19 HMX3 (ENSMAMG00000019482) #20 bub3 (ENSMAMG00000025134) #22 GPR26 (ENSMAMG00000019506) #23 CPXM2 (ENSMAMG00000019514) #24 CHST15 (ENSMAMG00000019524) #25 oat (ENSMAMG00000019541) #26 lhpp (ENSMAMG00000019553) #28 fam53b (ENSMAMG00000019574) #29 hpdl (ENSMAMG00000019595) ZRANB1 (ENSMAMG00000019599) #34 ENSMAMG00000019641 MMP21 (ENSMAMG00000019689) bccip (ENSMAMG00000020052) dhx32a (ENSMAMG00000020062) ADAM12 (ENSMAMG00000020105) ENSMAMG00000020124 dock1 (ENSMAMG00000020132) Anabantoidei ANCESTRAL SPECIES 10 ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000181498 ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000153123.C.b Climbing perch MODERN SPECIES 10 chst3b (ENSATEG00000027456) GHITM (ENSATEG00000000327) ENSATEG00000000296 CDHR1 (ENSATEG00000000330) LRIT2 (ENSATEG00000000498) lrit1b (ENSATEG00000000513) rgrb (ENSATEG00000000531) slc18a3b (ENSATEG00000000537) CHAT (ENSATEG00000000558) ENSATEG00000000627 ENSATEG00000000637 PSTK (ENSATEG00000027064) #17 IKZF5 (ENSATEG00000028196) #18 ACADSB (ENSATEG00000000683) #19 HMX3 (ENSATEG00000000741) #20 bub3 (ENSATEG00000000783) #22 GPR26 (ENSATEG00000025359) #23 CPXM2 (ENSATEG00000000844) #24 CHST15 (ENSATEG00000000910) #25 oat (ENSATEG00000000951) #26 lhpp (ENSATEG00000000989) #28 fam53b (ENSATEG00000001019) #29 hpdl (ENSATEG00000001026) ZRANB1 (ENSATEG00000001032) #34 ENSATEG00000001093 MMP21 (ENSATEG00000001154) uros (ENSATEG00000001194) bccip (ENSATEG00000001234) dhx32a (ENSATEG00000001267) ADAM12 (ENSATEG00000001358) ENSATEG00000001467 Siamese fighting fish MODERN SPECIES 9 fbxl15 (ENSBSLG00000023648) pax2b (ENSBSLG00000023659) chst3b (ENSBSLG00000023686) GHITM (ENSBSLG00000023688) CDHR1 (ENSBSLG00000023706) LRIT2 (ENSBSLG00000023917) lrit1b (ENSBSLG00000023922) rgrb (ENSBSLG00000023931) slc18a3b (ENSBSLG00000023942) CHAT (ENSBSLG00000023959) ENSBSLG00000024078 zgc:174164 (ENSBSLG00000024447) IKZF5 (ENSBSLG00000024722) #18 ACADSB (ENSBSLG00000024743) #19 HMX3 (ENSBSLG00000024802) #20 bub3 (ENSBSLG00000024804) #22 GPR26 (ENSBSLG00000024825) #23 CPXM2 (ENSBSLG00000024852) #24 CHST15 (ENSBSLG00000025383) #25 oat (ENSBSLG00000025455) #26 lhpp (ENSBSLG00000025575) #28 fam53b (ENSBSLG00000025581) #29 hpdl (ENSBSLG00000025585) ZRANB1 (ENSBSLG00000025586) #34 ENSBSLG00000025603 mmp21 (ENSBSLG00000025712) uros (ENSBSLG00000025733) bccip (ENSBSLG00000025752) dhx32a (ENSBSLG00000025763) ADAM12 (ENSBSLG00000025799) ENSBSLG00000025943 Eupercaria ANCESTRAL SPECIES 10 ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000181498 ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a Tetraodontidae ANCESTRAL SPECIES 68 ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00530000063787.B.d.a Fugu MODERN SPECIES pax2b (ENSTRUG00000011987) chst3b (ENSTRUG00000022669) rgrb (ENSTRUG00000011877) LRIT1 (ENSTRUG00000011838) LRIT2 (ENSTRUG00000011830) CDHR1 (ENSTRUG00000011689) GHITM (ENSTRUG00000011606) SLC18A3 (ENSTRUG00000011581) CHAT (ENSTRUG00000011392) ENSTRUG00000011370 zgc:174164 (ENSTRUG00000010809) PSTK (ENSTRUG00000023121) #17 IKZF5 (ENSTRUG00000025903) #18 ACADSB (ENSTRUG00000010600) #19 HMX3 (ENSTRUG00000010564) #20 bub3 (ENSTRUG00000010515) #22 GPR26 (ENSTRUG00000010483) #23 CPXM2 (ENSTRUG00000010158) #24 CHST15 (ENSTRUG00000010119) #25 oat (ENSTRUG00000009971) #26 lhpp (ENSTRUG00000009963) #28 fam53b (ENSTRUG00000009901) #29 hpdl (ENSTRUG00000023471) ZRANB1 (ENSTRUG00000009736) #34 CTBP2 (ENSTRUG00000009444) #35 mmp21 (ENSTRUG00000009330) uros (ENSTRUG00000009173) bccip (ENSTRUG00000009085) dhx32a (ENSTRUG00000008780) ADAM12 (ENSTRUG00000008494) INSYN2A (ENSTRUG00000008477) Tetraodon MODERN SPECIES 17 scd (ENSTNIG00000019395) SEC31B (ENSTNIG00000019396) ndufb8 (ENSTNIG00000019397) gpx9 (ENSTNIG00000019398) fbxl15 (ENSTNIG00000019399) ENSTNIG00000019400 rgrb (ENSTNIG00000019401) LRIT1 (ENSTNIG00000019402) LRIT2 (ENSTNIG00000019403) CDHR1 (ENSTNIG00000019404) GHITM (ENSTNIG00000019405) SLC18A3 (ENSTNIG00000019406) CHAT (ENSTNIG00000019407) PARG (ENSTNIG00000019408) zgc:174164 (ENSTNIG00000019409) bub3 (ENSTNIG00000019410) #22 CPXM2 (ENSTNIG00000019411) #24 CHST15 (ENSTNIG00000019412) #25 oat (ENSTNIG00000019413) #26 ENSTNIG00000019414 #28 fam53b (ENSTNIG00000019415) #29 ENSTNIG00000019416 ENSTNIG00000019417 ZRANB1 (ENSTNIG00000019418) #34 CTBP2 (ENSTNIG00000019419) #35 mmp21 (ENSTNIG00000010366) bccip (ENSTNIG00000010367) dhx32a (ENSTNIG00000010368) ADAM12 (ENSTNIG00000010369) dock1 (ENSTNIG00000010370) ENSTNIG00000010371 Eupecaria_A ANCESTRAL SPECIES 22 ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000181498 ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a Ballan wrasse MODERN SPECIES 349 ENSLBEG00000016945 ppa1a (ENSLBEG00000016977) lrrc20 (ENSLBEG00000017005) ndr2 (ENSLBEG00000017017) pald1a (ENSLBEG00000017044) ADAMTS14 (ENSLBEG00000017085) ENSLBEG00000017132 TBATA (ENSLBEG00000017166) QRFPR (ENSLBEG00000017188) polr3a (ENSLBEG00000017214) ZMIZ1 (ENSLBEG00000017313) PSTK (ENSLBEG00000017378) #17 IKZF5 (ENSLBEG00000017395) #18 ACADSB (ENSLBEG00000017423) #19 HMX3 (ENSLBEG00000017463) #20 bub3 (ENSLBEG00000017492) #22 GPR26 (ENSLBEG00000017517) #23 CPXM2 (ENSLBEG00000017531) #24 Eupecaria_B ANCESTRAL SPECIES 22 ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000181498 ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a Perciformes ANCESTRAL SPECIES 9 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a Cottioidei ANCESTRAL SPECIES 12 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00730000113876 Lumpfish MODERN SPECIES 10 pax2b (ENSCLMG00005013406) chst3b (ENSCLMG00005013411) GHITM (ENSCLMG00005013412) CDHR1 (ENSCLMG00005013413) LRIT2 (ENSCLMG00005013420) lrit1b (ENSCLMG00005013421) rgrb (ENSCLMG00005013423) slc18a3b (ENSCLMG00005013424) CHAT (ENSCLMG00005013425) ENSCLMG00005013591 zgc:174164 (ENSCLMG00005006021) PSTK (ENSCLMG00005006224) #17 IKZF5 (ENSCLMG00005006226) #18 ACADSB (ENSCLMG00005006233) #19 HMX3 (ENSCLMG00005006313) #20 bub3 (ENSCLMG00005006318) #22 GPR26 (ENSCLMG00005006323) #23 CPXM2 (ENSCLMG00005006326) #24 CHST15 (ENSCLMG00005006329) #25 oat (ENSCLMG00005006337) #26 lhpp (ENSCLMG00005006984) #28 fam53b (ENSCLMG00005006985) #29 hpdl (ENSCLMG00005006987) ZRANB1 (ENSCLMG00005006988) #34 ENSCLMG00005006989 mmp21 (ENSCLMG00005006992) uros (ENSCLMG00005006994) bccip (ENSCLMG00005007003) dhx32a (ENSCLMG00005007005) ADAM12 (ENSCLMG00005007034) dock1 (ENSCLMG00005007103) Stickleback MODERN SPECIES 5 pax2b (ENSGACG00000002432) chst3b (ENSGACG00000002438) GHITM (ENSGACG00000002440) CDHR1 (ENSGACG00000002462) LRIT2 (ENSGACG00000002463) lrit1b (ENSGACG00000002464) rgrb (ENSGACG00000002465) slc18a3b (ENSGACG00000002480) CHAT (ENSGACG00000002482) PARG (ENSGACG00000002486) zgc:174164 (ENSGACG00000002492) ENSGACG00000002499 IKZF5 (ENSGACG00000002500) #18 ACADSB (ENSGACG00000002502) #19 HMX3 (ENSGACG00000002521) #20 bub3 (ENSGACG00000002522) #22 GPR26 (ENSGACG00000002532) #23 CPXM2 (ENSGACG00000002535) #24 CHST15 (ENSGACG00000002542) #25 oat (ENSGACG00000002546) #26 lhpp (ENSGACG00000002578) #28 fam53b (ENSGACG00000002593) #29 hpdl (ENSGACG00000002596) ZRANB1 (ENSGACG00000002597) #34 CTBP2 (ENSGACG00000002600) #35 mmp21 (ENSGACG00000002602) uros (ENSGACG00000002608) bccip (ENSGACG00000002614) dhx32a (ENSGACG00000002621) ADAM12 (ENSGACG00000002628) ENSGACG00000002637 Perciformes_a ANCESTRAL SPECIES 8 ENSGT00940000157412.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000153123.C.b Channel bull blenny MODERN SPECIES 10 pax2b (ENSCGOG00000020120) chst3b (ENSCGOG00000020109) GHITM (ENSCGOG00000020046) CDHR1 (ENSCGOG00000019906) LRIT2 (ENSCGOG00000019902) lrit1b (ENSCGOG00000019901) rgrb (ENSCGOG00000019896) slc18a3b (ENSCGOG00000019894) CHAT (ENSCGOG00000019798) ENSCGOG00000019515 zgc:174164 (ENSCGOG00000019488) PSTK (ENSCGOG00000019484) #17 IKZF5 (ENSCGOG00000019486) #18 ACADSB (ENSCGOG00000019260) #19 HMX3 (ENSCGOG00000019253) #20 bub3 (ENSCGOG00000019236) #22 GPR26 (ENSCGOG00000019232) #23 CPXM2 (ENSCGOG00000018896) #24 CHST15 (ENSCGOG00000018891) #25 oat (ENSCGOG00000018784) #26 lhpp (ENSCGOG00000018768) #28 fam53b (ENSCGOG00000018762) #29 hpdl (ENSCGOG00000018757) ZRANB1 (ENSCGOG00000018728) #34 ENSCGOG00000018617 mmp21 (ENSCGOG00000018613) uros (ENSCGOG00000018598) bccip (ENSCGOG00000018594) dhx32a (ENSCGOG00000018590) ADAM12 (ENSCGOG00000018303) ENSCGOG00000018297 Pike perch MODERN SPECIES 3 pax2b (ENSSLUG00000005014) chst3b (ENSSLUG00000004994) GHITM (ENSSLUG00000004981) CDHR1 (ENSSLUG00000004627) LRIT2 (ENSSLUG00000004583) lrit1b (ENSSLUG00000004569) rgrb (ENSSLUG00000004557) slc18a3b (ENSSLUG00000004554) CHAT (ENSSLUG00000004451) ENSSLUG00000004280 zgc:174164 (ENSSLUG00000004208) PSTK (ENSSLUG00000004186) #17 IKZF5 (ENSSLUG00000004179) #18 ACADSB (ENSSLUG00000004106) #19 HMX3 (ENSSLUG00000004095) #20 bub3 (ENSSLUG00000004077) #22 GPR26 (ENSSLUG00000004053) #23 ENSSLUG00000004040 #24 CPXM2 (ENSSLUG00000004028) #24 CHST15 (ENSSLUG00000004013) #25 oat (ENSSLUG00000003683) #26 lhpp (ENSSLUG00000003628) #28 fam53b (ENSSLUG00000003620) #29 hpdl (ENSSLUG00000003609) ZRANB1 (ENSSLUG00000003538) #34 ENSSLUG00000003386 mmp21 (ENSSLUG00000003312) uros (ENSSLUG00000024636) bccip (ENSSLUG00000024625) dhx32a (ENSSLUG00000024622) ADAM12 (ENSSLUG00000024431) Eupecaria_C ANCESTRAL SPECIES 23 ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000181498 ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000153123.C.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 33 ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000181498 ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000153123.C.b European seabass MODERN SPECIES 11 ENSDLAG00005022916 chst3b (ENSDLAG00005022980) GHITM (ENSDLAG00005022983) ENSDLAG00005022985 CDHR1 (ENSDLAG00005022996) LRIT2 (ENSDLAG00005023278) lrit1b (ENSDLAG00005023279) rgrb (ENSDLAG00005023284) SLC18A3 (ENSDLAG00005034152) ENSDLAG00005023291 ENSDLAG00005023405 ENSDLAG00005023453 PSTK (ENSDLAG00005004314) #17 ENSDLAG00005004331 #18 ACADSB (ENSDLAG00005004391) #19 bub3 (ENSDLAG00005004871) #22 GPR26 (ENSDLAG00005033829) #23 CPXM2 (ENSDLAG00005004973) #24 CHST15 (ENSDLAG00005005877) #25 oat (ENSDLAG00005005905) #26 lhpp (ENSDLAG00005033392) #28 fam53b (ENSDLAG00005006019) #29 ZRANB1 (ENSDLAG00005006048) #34 hpdl (ENSDLAG00005006032) ENSDLAG00005006098 MMP21 (ENSDLAG00005027490) bccip (ENSDLAG00005031346) dhx32a (ENSDLAG00005006732) ADAM12 (ENSDLAG00005006783) dock1 (ENSDLAG00005007276) FAM196A (ENSDLAG00005015347) Large yellow croaker MODERN SPECIES 488 pax2b (ENSLCRG00005004568) chst3b (ENSLCRG00005004565) GHITM (ENSLCRG00005004557) CDHR1 (ENSLCRG00005003395) LRIT2 (ENSLCRG00005003385) lrit1b (ENSLCRG00005003382) rgrb (ENSLCRG00005003378) slc18a3b (ENSLCRG00005003376) CHAT (ENSLCRG00005003302) ENSLCRG00005003210 zgc:174164 (ENSLCRG00005003184) PSTK (ENSLCRG00005003176) #17 IKZF5 (ENSLCRG00005003174) #18 ACADSB (ENSLCRG00005003147) #19 HMX3 (ENSLCRG00005003143) #20 bub3 (ENSLCRG00005003139) #22 GPR26 (ENSLCRG00005003134) #23 CPXM2 (ENSLCRG00005001384) #24 CHST15 (ENSLCRG00005001374) #25 oat (ENSLCRG00005000873) #26 lhpp (ENSLCRG00005000794) #28 fam53b (ENSLCRG00005022614) #29 hpdl (ENSLCRG00005022613) ZRANB1 (ENSLCRG00005022611) #34 ENSLCRG00005022537 mmp21 (ENSLCRG00005022531) uros (ENSLCRG00005022530) bccip (ENSLCRG00005022527) dhx32a (ENSLCRG00005022524) ADAM12 (ENSLCRG00005022455) ENSLCRG00005022452 Gilthead seabream MODERN SPECIES 12 fbxl15 (ENSSAUG00010023066) pax2b (ENSSAUG00010023067) chst3b (ENSSAUG00010023075) CDHR1 (ENSSAUG00010023084) LRIT2 (ENSSAUG00010023309) lrit1b (ENSSAUG00010023310) rgrb (ENSSAUG00010023311) slc18a3b (ENSSAUG00010023312) CHAT (ENSSAUG00010023314) ENSSAUG00010023317 zgc:174164 (ENSSAUG00010023329) PSTK (ENSSAUG00010023335) #17 IKZF5 (ENSSAUG00010023337) #18 ACADSB (ENSSAUG00010023340) #19 HMX3 (ENSSAUG00010023349) #20 bub3 (ENSSAUG00010023350) #22 GPR26 (ENSSAUG00010023351) #23 CPXM2 (ENSSAUG00010023369) #24 CHST15 (ENSSAUG00010023814) #25 oat (ENSSAUG00010023818) #26 lhpp (ENSSAUG00010023824) #28 fam53b (ENSSAUG00010023826) #29 hpdl (ENSSAUG00010023827) ZRANB1 (ENSSAUG00010023828) #34 ENSSAUG00010023830 mmp21 (ENSSAUG00010023865) uros (ENSSAUG00010023867) bccip (ENSSAUG00010023874) dhx32a (ENSSAUG00010023877) ADAM12 (ENSSAUG00010023879) ENSSAUG00010024056 Protacanthopterygii ANCESTRAL SPECIES 9 ENSGT00940000166115 ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000160878.f ENSGT00940000155495.C.a.a Salmoninae ANCESTRAL SPECIES 142 ENSGT00940000166115.h ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00940000160392.d #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002.a #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000153123.C.b Salmoninae_a ANCESTRAL SPECIES 100 ENSGT00940000166115.h ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00940000160392.d #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002.a #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000159140.d ENSGT00390000009853 ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a ENSGT00940000153123.C.b Oncorhynchus ANCESTRAL SPECIES 79 ENSGT00940000166115.g.a.a ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00940000160392.d #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002.a #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.c.a #35 ENSGT00940000159140.d.h ENSGT00390000009853.z ENSGT00390000009853.y.a ENSGT00390000000696 ENSGT00940000157227.g ENSGT00940000155495.C.a.a Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 249 ENSOMYG00000074854 ENSOMYG00000072553 PSTK (ENSOMYG00000063805) #17 IKZF5 (ENSOMYG00000001060) #18 ACADSB (ENSOMYG00000071031) #19 HMX3 (ENSOMYG00000069374) #20 HMX2 (ENSOMYG00000069483) #21 bub3 (ENSOMYG00000055038) #22 Rainbow trout MODERN SPECIES FMN2 (ENSOMYG00000056470) CHRM3 (ENSOMYG00000031062) ENSOMYG00000052284 mtr (ENSOMYG00000070737) ENSOMYG00000051567 ENSOMYG00000051216 ENSOMYG00000051804 ENSOMYG00000060316 ENSOMYG00000077826 ENSOMYG00000058098 ENSOMYG00000001087 #17 IKZF5 (ENSOMYG00000077434) #18 ENSOMYG00000059877 #19 HMX3 (ENSOMYG00000055890) #20 HMX2 (ENSOMYG00000025022) #21 bub3 (ENSOMYG00000069949) #22 ENSOMYG00000077443 UROS (ENSOMYG00000022570) bccip (ENSOMYG00000022621) dhx32a (ENSOMYG00000048987) ENSOMYG00000030733 ENSOMYG00000069654 ADAM12 (ENSOMYG00000071065) ENSOMYG00000052817 ENSOMYG00000053731 INSYN2A (ENSOMYG00000060805) dock1 (ENSOMYG00000070523) foxi1 (ENSOMYG00000038368) CLRN3 (ENSOMYG00000000959) ENSOMYG00000055563 ENSOMYG00000066994 Oncorhynchus_a ANCESTRAL SPECIES 217 ENSGT00940000166115.g.a.a ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00940000160392.d #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 Coho salmon DUPLICATION Coho salmon MODERN SPECIES 33 RGS7 (ENSOKIG00005033689) grem2b (ENSOKIG00005033680) ENSOKIG00005049012 FMN2 (ENSOKIG00005049005) ENSOKIG00005049001 CHRM3 (ENSOKIG00005048997) ENSOKIG00005048989 ENSOKIG00005048957 ENSOKIG00005048946 PSTK (ENSOKIG00005048944) #17 IKZF5 (ENSOKIG00005048941) #18 ACADSB (ENSOKIG00005048931) #19 ENSOKIG00005048922 HMX3 (ENSOKIG00005048918) #20 HMX2 (ENSOKIG00005048914) #21 bub3 (ENSOKIG00005048894) #22 GPR26 (ENSOKIG00005048878) #23 ENSOKIG00005048868 ENSOKIG00005048865 CPXM2 (ENSOKIG00005048676) #24 CHST15 (ENSOKIG00005048643) #25 oat (ENSOKIG00005048618) #26 ENSOKIG00005048614 ENSOKIG00005048613 ENSOKIG00005048609 ENSOKIG00005048608 dock1 (ENSOKIG00005048213) foxi1 (ENSOKIG00005048153) CLRN3 (ENSOKIG00005048151) PTPRE (ENSOKIG00005047066) ebf3a (ENSOKIG00005046976) Coho salmon MODERN SPECIES 1335 zgc:174164 (ENSOKIG00005043282) PSTK (ENSOKIG00005043269) #17 IKZF5 (ENSOKIG00005043256) #18 ACADSB (ENSOKIG00005043216) #19 HMX3 (ENSOKIG00005043203) #20 HMX2 (ENSOKIG00005043199) #21 bub3 (ENSOKIG00005043145) #22 ENSOKIG00005043135 GPR26 (ENSOKIG00005043075) #23 ENSOKIG00005043065 CPXM2 (ENSOKIG00005042322) #24 CHST15 (ENSOKIG00005042243) #25 Chinook salmon MODERN SPECIES 1454 bub3 (ENSOTSG00005019529) #22 Salmo DUPLICATION Salmo ANCESTRAL SPECIES 134 ENSGT01030000235112 ENSGT00940000160084.h.b ENSGT00940000154906.C.d.w.b ENSGT00420000029824.g ENSGT00940000153968.b.c.a ENSGT01030000234635.a.a.a.b.e ENSGT00420000029824.h ENSGT00940000166115.h ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00940000160392.d #21 ENSGT00950000183091.A.a.z #22 ENSGT00950000183001.a.a.c #23 ENSGT00950000183091.A.a.y #22 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895.e #26 ENSGT00940000159002.a.b #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a.e #34 ENSGT00940000154430.c.a #35 ENSGT00940000158045.a.f #34 ENSGT00940000159140.d ENSGT00390000009853.w Atlantic salmon MODERN SPECIES ENSSSAG00000040023 ENSSSAG00000121509 ENSSSAG00000117214 ENSSSAG00000093603 ENSSSAG00000094559 mtr (ENSSSAG00000088743) ENSSSAG00000107457 ENSSSAG00000113300 ENSSSAG00000105738 ENSSSAG00000087513 PSTK (ENSSSAG00000068978) #17 IKZF5 (ENSSSAG00000068982) #18 ACADSB (ENSSSAG00000068986) #19 HMX3 (ENSSSAG00000069042) #20 HMX2 (ENSSSAG00000104322) #21 bub3 (ENSSSAG00000115825) #22 ENSSSAG00000104504 ENSSSAG00000114544 ENSSSAG00000088336 ENSSSAG00000089060 ENSSSAG00000121150 CHST15 (ENSSSAG00000001170) #25 ENSSSAG00000010431 ENSSSAG00000111788 oat (ENSSSAG00000000881) #26 lhpp (ENSSSAG00000060938) #28 fa53b (ENSSSAG00000000510) #29 ENSSSAG00000000526 ENSSSAG00000089407 ENSSSAG00000094710 ENSSSAG00000093828 #34 River trout MODERN SPECIES 590 ENSSTUG00000033958 ENSSTUG00000034023 mtr (ENSSTUG00000034844) ENSSTUG00000034872 mtr (ENSSTUG00000034942) ENSSTUG00000036700 ENSSTUG00000036709 SYDE1 (ENSSTUG00000036742) zgc:174164 (ENSSTUG00000036794) PSTK (ENSSTUG00000036874) #17 IKZF5 (ENSSTUG00000036882) #18 ACADSB (ENSSTUG00000036888) #19 ENSSTUG00000036914 HMX3 (ENSSTUG00000036918) #20 HMX2 (ENSSTUG00000036925) #21 bub3 (ENSSTUG00000036930) #22 ENSSTUG00000036965 zgc:174164 (ENSSTUG00000036981) PSTK (ENSSTUG00000037104) #17 IKZF5 (ENSSTUG00000037122) #18 ACADSB (ENSSTUG00000037153) #19 ENSSTUG00000037211 HMX3 (ENSSTUG00000037214) #20 HMX2 (ENSSTUG00000037228) #21 bub3 (ENSSTUG00000037235) #22 GPR26 (ENSSTUG00000037302) #23 CPXM2 (ENSSTUG00000037346) #24 ENSSTUG00000037622 #24 GPR26 (ENSSTUG00000038020) #23 ENSSTUG00000038057 CHST15 (ENSSTUG00000038062) #25 Salmo ANCESTRAL SPECIES 134 ENSGT01030000235112 ENSGT00940000160084.h.b ENSGT00940000154906.C.d.w.b ENSGT00420000029824.g ENSGT00940000153968.b.c.a ENSGT01030000234635.a.a.a.b.e ENSGT00420000029824.h ENSGT00940000166115.h ENSGT00390000017554 #17 ENSGT00940000155035.n.b #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00940000160392.d #21 ENSGT00950000183091.A.a.z #22 ENSGT00950000183001.a.a.c #23 ENSGT00950000183091.A.a.y #22 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895.e #26 ENSGT00940000159002.a.b #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a.e #34 ENSGT00940000154430.c.a #35 ENSGT00940000158045.a.f #34 ENSGT00940000159140.d ENSGT00390000009853.w Atlantic salmon MODERN SPECIES 9 ENSSSAG00000101061 ENSSSAG00000102140 ENSSSAG00000011817 ENSSSAG00000083154 ENSSSAG00000084605 ENSSSAG00000100171 ENSSSAG00000104679 ENSSSAG00000111551 ENSSSAG00000083976 ENSSSAG00000040087 PSTK (ENSSSAG00000040262) #17 IKZF5 (ENSSSAG00000098119) #18 ACADSB (ENSSSAG00000039884) #19 HMX3 (ENSSSAG00000103220) #20 HMX2 (ENSSSAG00000069043) #21 bub3 (ENSSSAG00000039728) #22 GPR26 (ENSSSAG00000068320) #23 CPXM2 (ENSSSAG00000044099) #24 CHST15 (ENSSSAG00000115827) #25 oat (ENSSSAG00000006861) #26 lhpp (ENSSSAG00000006753) #28 fam53b (ENSSSAG00000084921) #29 ENSSSAG00000111786 ENSSSAG00000104982 ZRANB1 (ENSSSAG00000113666) #34 ENSSSAG00000108166 CTBP2 (ENSSSAG00000114193) #35 ENSSSAG00000059118 ENSSSAG00000084410 UROS (ENSSSAG00000015500) bccip (ENSSSAG00000015607) River trout MODERN SPECIES 590 PSTK (ENSSTUG00000036874) #17 IKZF5 (ENSSTUG00000036882) #18 ACADSB (ENSSTUG00000036888) #19 ENSSTUG00000036914 HMX3 (ENSSTUG00000036918) #20 HMX2 (ENSSTUG00000036925) #21 bub3 (ENSSTUG00000036930) #22 ENSSTUG00000036965 zgc:174164 (ENSSTUG00000036981) PSTK (ENSSTUG00000037104) #17 IKZF5 (ENSSTUG00000037122) #18 ACADSB (ENSSTUG00000037153) #19 ENSSTUG00000037211 HMX3 (ENSSTUG00000037214) #20 HMX2 (ENSSTUG00000037228) #21 bub3 (ENSSTUG00000037235) #22 GPR26 (ENSSTUG00000037302) #23 CPXM2 (ENSSTUG00000037346) #24 ENSSTUG00000037622 #24 GPR26 (ENSSTUG00000038020) #23 ENSSTUG00000038057 CHST15 (ENSSTUG00000038062) #25 Huchen MODERN SPECIES 3634 HMX3 (ENSHHUG00000048456) #20 HMX2 (ENSHHUG00000048461) #21 bub3 (ENSHHUG00000048463) #22 ENSHHUG00000048468 Northern pike MODERN SPECIES 5 FMN2 (ENSELUG00000016861) CHRM3 (ENSELUG00000016733) ENSELUG00000027566 ENSELUG00000016641 mtr (ENSELUG00000016443) ENSELUG00000016255 ENSELUG00000015737 SYDE1 (ENSELUG00000015698) zgc:174164 (ENSELUG00000032296) zgc:174164 (ENSELUG00000015648) pstk (ENSELUG00000015486) #17 IKZF5 (ENSELUG00000015447) #18 ACADSB (ENSELUG00000015403) #19 HMX3 (ENSELUG00000015386) #20 HMX2 (ENSELUG00000015370) #21 bub3 (ENSELUG00000015355) #22 ENSELUG00000015338 GPR26 (ENSELUG00000015333) #23 CPXM2 (ENSELUG00000000559) #24 CHST15 (ENSELUG00000015303) #25 oat (ENSELUG00000015274) #26 lhpp (ENSELUG00000015266) #28 fam53b (ENSELUG00000015234) #29 hpdl (ENSELUG00000015209) ZRANB1 (ENSELUG00000015155) #34 CTBP2 (ENSELUG00000015118) #35 mmp21 (ENSELUG00000015094) uros (ENSELUG00000015075) bccip (ENSELUG00000015036) ENSELUG00000015013 dhx32a (ENSELUG00000014983) Otomorpha ANCESTRAL SPECIES 37 ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00390000017554 #17 ENSGT00940000155035.m #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00940000165331 ENSGT00940000155035.n.a #18 ENSGT00940000158286.e.a #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00730000114509 ENSGT00950000183001.a.a.d.a.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.d #35 ENSGT00940000168551 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 Otophysi ANCESTRAL SPECIES 154 ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00390000017554 #17 ENSGT00940000155035.m #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00950000186100 ENSGT00390000015768.i.a ENSGT00940000156955.a.a #10 ENSGT00940000155157.a #9 ENSGT00940000165331 ENSGT00940000155035.n.a #18 ENSGT00940000158286.e.a #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00730000114509 ENSGT00950000183001.a.a.d.a.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.d #35 ENSGT00940000168551 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT01050000244965.a.a Characiphysae ANCESTRAL SPECIES 149 ENSGT00600000085659.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000017554 #17 ENSGT00940000155035.m #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b.d #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00730000114509 ENSGT00950000183001.a.a.d.a.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.d #35 ENSGT00940000168551 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT01050000244965.a.a Characiphysae_b ANCESTRAL SPECIES 145 ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000017554 #17 ENSGT00940000155035.m #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b.d #20 ENSGT00940000156955.a.a.e #10 ENSGT00940000155157.a #9 ENSGT00940000165331 ENSGT00940000155035.n.a #18 ENSGT00940000158286.e.a #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00730000114509 ENSGT00950000183001.a.a.d.a.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00940000154430.d #35 ENSGT00940000168551 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT01050000244965.a.a Characoidei ANCESTRAL SPECIES 171 ENSGT00600000085659.a.b ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000159143.c ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000017554 #17 ENSGT00940000155035.m #18 ENSGT00940000156525 #19 ENSGT00940000158286.e.b.d #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00730000114509 ENSGT00950000183001.a.a.d.a.a.a #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000168551 ENSGT00940000166669.b ENSGT00940000159140.d ENSGT00390000009853 ENSGT01050000244965.a.a ENSGT01100000263529.a.a.a.a.a.a.a.b.b.a.b ENSGT01030000234578.A.b.a.a.a.b Red-bellied piranha MODERN SPECIES 1008 HMX3 (ENSPNAG00000003571) #20 HMX2 (ENSPNAG00000019047) #21 bub3 (ENSPNAG00000019020) #22 Mexicana tetra MODERN SPECIES 117 ENSAMXG00000044028 ENSAMXG00000004372 scd (ENSAMXG00000004360) GHITM (ENSAMXG00000004354) ENSAMXG00000004348 LRIT2 (ENSAMXG00000043613) lrit1b (ENSAMXG00000029266) rgrb (ENSAMXG00000004323) slc18a3b (ENSAMXG00000025603) CHAT (ENSAMXG00000004303) PSTK (ENSAMXG00000004297) #17 ENSAMXG00000033540 #18 ACADSB (ENSAMXG00000034865) #19 HMX3 (ENSAMXG00000030895) #20 HMX2 (ENSAMXG00000035751) #21 bub3 (ENSAMXG00000004273) #22 ENSAMXG00000004262 GPR26 (ENSAMXG00000004253) #23 ENSAMXG00000004247 #24 Electric eel MODERN SPECIES 641 ENSEEEG00000020266 chst3b (ENSEEEG00000020268) GHITM (ENSEEEG00000020270) CDHR1 (ENSEEEG00000020278) lrit1b (ENSEEEG00000020285) rgrb (ENSEEEG00000020290) slc18a3b (ENSEEEG00000020294) CHAT (ENSEEEG00000020297) PSTK (ENSEEEG00000020305) #17 ENSEEEG00000020307 #18 ACADSB (ENSEEEG00000020313) #19 HMX3 (ENSEEEG00000020353) #20 bub3 (ENSEEEG00000020361) #22 Channel catfish MODERN SPECIES 4 zgc:92749 (ENSIPUG00000002576) UROS (ENSIPUG00000002557) mmp21 (ENSIPUG00000002534) ctbp2a (ENSIPUG00000002494) #35 zranb1 (ENSIPUG00000002479) #34 hpdl (ENSIPUG00000002460) fam53b (ENSIPUG00000002445) #29 lhpp (ENSIPUG00000002423) #28 ENSIPUG00000002416 oat (ENSIPUG00000002393) #26 CHST15 (ENSIPUG00000002375) #25 cpxm2 (ENSIPUG00000002367) #24 gpr26 (ENSIPUG00000002346) #23 hmx3 (ENSIPUG00000002335) #20 hmx2 (ENSIPUG00000002329) #21 bub3 (ENSIPUG00000002319) #22 ENSIPUG00000002314 ENSIPUG00000002308 ENSIPUG00000002305 ENSIPUG00000002278 ENSIPUG00000002269 ENSIPUG00000002261 ENSIPUG00000002253 ENSIPUG00000002245 ENSIPUG00000002233 ACADSB (ENSIPUG00000002210) #19 ikzf5 (ENSIPUG00000002196) #18 ENSIPUG00000002201 #17 ENSIPUG00000002188 CHAT (ENSIPUG00000002156) slc18a3b (ENSIPUG00000002152) Cyprinoidei ANCESTRAL SPECIES 161 ENSGT00940000161045.a ENSGT01050000244940.a.b ENSGT00940000155509.b.a ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a ENSGT00390000017554 #17 ENSGT00940000156525.a #19 ENSGT00940000156525.b #19 ENSGT00940000158286.e.b #20 ENSGT00950000183091.A.a #22 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 532 ENSGT00940000161045.a ENSGT01050000244940.a.b.qb ENSGT01050000244940.a.b.pb ENSGT00940000155509.b.a ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a.a.a ENSGT00390000017554 #17 ENSGT00940000156525.b #19 ENSGT00940000158286.e.b.a #20 ENSGT00950000183091.A.a.ab #22 ENSGT00940000158286.e.b.b #20 ENSGT00950000183091.A.a.`b #22 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e.b #29 Cyprininae_a DUPLICATION Cyprininae_a ANCESTRAL SPECIES 390 ENSGT00940000159449.c.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a.a.a ENSGT00390000017554 #17 ENSGT00940000156525.b #19 ENSGT00940000158286.e.b.b #20 ENSGT00950000183091.A.a.`b.b #22 ENSGT00940000158286.e.b.a #20 ENSGT00950000183091.A.a.ab #22 ENSGT00940000156414 #24 ENSGT00950000183091.A.a.`b.a #22 ENSGT00390000004719.b #25 ENSGT00630000089895.g #26 ENSGT00530000063371.B.e.a #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00420000029824 ENSGT00940000160084.h.e ENSGT00940000154289.B.e.b ENSGT00940000154209.a.b.a ENSGT00940000156661.b.b ENSGT00950000183122.A.d.a ENSGT00940000166815.b ENSGT00940000167571.b Common carp reference MODERN SPECIES 25 ENSCCRG00000062616 dpysl4 (ENSCCRG00000052032) ENSCCRG00000030503 bnip3 (ENSCCRG00000040039) ppp2r2d (ENSCCRG00000082487) TCERG1L (ENSCCRG00000067852) ENSCCRG00000027544 glrx3 (ENSCCRG00000014693) chst3b (ENSCCRG00000059035) GHITM (ENSCCRG00000024786) ENSCCRG00000077609 lrit1b (ENSCCRG00000063641) rgrb (ENSCCRG00000038403) slc18a3b (ENSCCRG00000030113) ENSCCRG00000082073 BUB3 (ENSCCRG00000038464) #22 ENSCCRG00000048004 #20 CPXM2 (ENSCCRG00000031502) #24 oat (ENSCCRG00000054433) #26 LHPP (ENSCCRG00000053395) #28 fam53b (ENSCCRG00000067260) #29 ENSCCRG00000077413 #34 ENSCCRG00000048939 ENSCCRG00000075022 ENSCCRG00000045597 ENSCCRG00000071171 ENSCCRG00000049133 ENSCCRG00000078275 ENSCCRG00000045444 ENSCCRG00000014254 ENSCCRG00000011425 Golden-line barbel MODERN SPECIES 2170 chst3b (ENSSGRG00000011343) GHITM (ENSSGRG00000011347) ENSSGRG00000011469 lrit1b (ENSSGRG00000011477) rgrb (ENSSGRG00000011478) ENSSGRG00000011480 #19 bub3 (ENSSGRG00000011483) #22 Cyprininae_a ANCESTRAL SPECIES 390 ENSGT00940000159449.c.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a.a.a ENSGT00390000017554 #17 ENSGT00940000156525.b #19 ENSGT00940000158286.e.b.b #20 ENSGT00950000183091.A.a.`b.b #22 ENSGT00940000158286.e.b.a #20 ENSGT00950000183091.A.a.ab #22 ENSGT00940000156414 #24 ENSGT00950000183091.A.a.`b.a #22 ENSGT00390000004719.b #25 ENSGT00630000089895.g #26 ENSGT00530000063371.B.e.a #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00420000029824 ENSGT00940000160084.h.e ENSGT00940000154289.B.e.b ENSGT00940000154209.a.b.a ENSGT00940000156661.b.b ENSGT00950000183122.A.d.a Common carp reference MODERN SPECIES 44 TCERG1L (ENSCCRG00000067068) glrx3 (ENSCCRG00000027551) ENSCCRG00000062912 ENSCCRG00000060238 GHITM (ENSCCRG00000031010) ENSCCRG00000061263 lrit1b (ENSCCRG00000054080) rgrb (ENSCCRG00000075528) ENSCCRG00000076235 slc18a3b (ENSCCRG00000047015) ENSCCRG00000054250 ENSCCRG00000038429 PSTK (ENSCCRG00000054711) #17 ACADSB (ENSCCRG00000069429) #19 HMX3 (ENSCCRG00000038459) #20 bub3 (ENSCCRG00000067917) #22 CPXM2 (ENSCCRG00000031509) #24 CHST15 (ENSCCRG00000079489) #25 ENSCCRG00000067094 oat (ENSCCRG00000079674) #26 ENSCCRG00000048646 #29 hpdl (ENSCCRG00000048652) ENSCCRG00000081448 #34 mtr (ENSCCRG00000018980) ENSCCRG00000073577 ENSCCRG00000037939 CHRM3 (ENSCCRG00000062872) ENSCCRG00000028502 grem2b (ENSCCRG00000063882) RGS7 (ENSCCRG00000042793) fh (ENSCCRG00000069250) Goldfish MODERN SPECIES 30 ENSCARG00000039260 fh (ENSCARG00000039320) RGS7 (ENSCARG00000006062) grem2b (ENSCARG00000006287) FMN2 (ENSCARG00000006297) CHRM3 (ENSCARG00000006362) GHITM (ENSCARG00000007988) ENSCARG00000008065 lrit1b (ENSCARG00000009388) rgrb (ENSCARG00000009398) slc18a3b (ENSCARG00000009416) CHAT (ENSCARG00000009442) ENSCARG00000009534 ENSCARG00000009553 #17 HMX3 (ENSCARG00000009748) #20 bub3 (ENSCARG00000009755) #22 CHST15 (ENSCARG00000009767) #25 oat (ENSCARG00000009779) #26 fam53b (ENSCARG00000009792) #29 glrx3 (ENSCARG00000009799) ENSCARG00000009817 ENSCARG00000009822 ENSCARG00000009827 CDH10 (ENSCARG00000009844) CDH12 (ENSCARG00000009902) CDH18 (ENSCARG00000009929) EPC1 (ENSCARG00000009968) KIF5B (ENSCARG00000010266) ENSCARG00000010394 dpysl4 (ENSCARG00000010444) ENSCARG00000011396 Cyprininae ANCESTRAL SPECIES 532 ENSGT00940000161045.a ENSGT01050000244940.a.b.qb ENSGT01050000244940.a.b.pb ENSGT00940000155509.b.a ENSGT00940000156033.f ENSGT01090000260051.b.a.a.b.a ENSGT00940000159449.c.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a.a.a ENSGT00390000017554 #17 ENSGT00940000156525.b #19 ENSGT00940000158286.e.b.a #20 ENSGT00950000183091.A.a.ab #22 ENSGT00940000158286.e.b.b #20 ENSGT00950000183091.A.a.`b #22 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e.b #29 Goldfish MODERN SPECIES 30 FADS6 (ENSCARG00000011403) ENSCARG00000011432 trim16 (ENSCARG00000011439) exoc7 (ENSCARG00000011506) ENSCARG00000012614 vclb (ENSCARG00000012626) lrit1b (ENSCARG00000012669) rgrb (ENSCARG00000012678) slc18a3b (ENSCARG00000012685) CHAT (ENSCARG00000012691) ENSCARG00000012730 ENSCARG00000012761 #17 ENSCARG00000012768 ACADSB (ENSCARG00000012778) #19 HMX3 (ENSCARG00000012992) #20 bub3 (ENSCARG00000012996) #22 ENSCARG00000013007 ENSCARG00000013013 ENSCARG00000013019 ENSCARG00000013024 ENSCARG00000013032 ENSCARG00000013046 dock1 (ENSCARG00000013391) INSYN2A (ENSCARG00000026378) ADAM12 (ENSCARG00000026453) FANK1 (ENSCARG00000027651) dhx32a (ENSCARG00000027743) bccip (ENSCARG00000027912) wbp2 (ENSCARG00000027935) ENSCARG00000027960 ENSCARG00000027975 Cyprininae_a ANCESTRAL SPECIES 390 ENSGT00940000159449.c.c ENSGT01060000248556.A.b.b ENSGT00390000003652.c.a.a.a ENSGT00390000017554 #17 ENSGT00940000156525.b #19 ENSGT00940000158286.e.b.b #20 ENSGT00950000183091.A.a.`b.b #22 ENSGT00940000158286.e.b.a #20 ENSGT00950000183091.A.a.ab #22 ENSGT00940000156414 #24 ENSGT00950000183091.A.a.`b.a #22 ENSGT00390000004719.b #25 ENSGT00630000089895.g #26 ENSGT00530000063371.B.e.a #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 ENSGT00420000029824 ENSGT00940000160084.h.e ENSGT00940000154289.B.e.b ENSGT00940000154209.a.b.a ENSGT00940000156661.b.b ENSGT00950000183122.A.d.a ENSGT00940000166815.b ENSGT00940000167571.b Golden-line barbel MODERN SPECIES 1349 chst3b (ENSSGRG00000008790) ENSSGRG00000008791 slc18a3b (ENSSGRG00000009541) ENSSGRG00000009543 ENSSGRG00000009544 ENSSGRG00000009547 #17 HMX3 (ENSSGRG00000009550) #20 bub3 (ENSSGRG00000009552) #22 CPXM2 (ENSSGRG00000009565) #24 CHST15 (ENSSGRG00000009649) #25 oat (ENSSGRG00000009650) #26 fam53b (ENSSGRG00000009652) #29 hpdl (ENSSGRG00000009653) Zebrafish MODERN SPECIES 3 PSTK (ENSDARG00000115015) #17 ACADSB (ENSDARG00000076780) #19 HMX3 (ENSDARG00000096716) #20 bub3 (ENSDARG00000075883) #22 ENSDARG00000096738 ENSDARG00000117193 #24 ENSDARG00000116119 ENSDARG00000102972 chst3b (ENSDARG00000116042) ENSDARG00000098983 ENSDARG00000104756 lrit1b (ENSDARG00000099406) rgrb (ENSDARG00000098724) slc18a3b (ENSDARG00000107527) KCNMA1 (ENSDARG00000110727) DLG5 (ENSDARG00000090949) anxa11b (ENSDARG00000002632) ppifb (ENSDARG00000052842) ZMIZ1 (ENSDARG00000102279) Clupeiformes ANCESTRAL SPECIES 375 ENSGT00390000017554 #17 ENSGT00940000156525 #19 ENSGT00940000158286.e.b #20 ENSGT00940000160392 #21 ENSGT00950000183091.A.a #22 ENSGT00950000183001.a.a.c #23 ENSGT00940000156414 #24 ENSGT00390000004719.b #25 ENSGT00630000089895 #26 ENSGT00940000159002 #28 ENSGT00530000063371.B.e #29 ENSGT00530000063474.A ENSGT00940000158045.a #34 Denticle herring MODERN SPECIES 11 st6galnac1.1 (ENSDCDG00000020799) CASKIN2 (ENSDCDG00000020802) nme2a (ENSDCDG00000020812) ca10a (ENSDCDG00000020817) ENSDCDG00000020863 mrpl27 (ENSDCDG00000020865) ENSDCDG00000020869 RAB37 (ENSDCDG00000020882) nherf1a (ENSDCDG00000021165) MBTD1 (ENSDCDG00000021188) tdrkh (ENSDCDG00000021870) PSTK (ENSDCDG00000021872) #17 ACADSB (ENSDCDG00000021884) #19 HMX3 (ENSDCDG00000013829) #20 hmx2 (ENSDCDG00000013834) #21 bub3 (ENSDCDG00000013841) #22 GPR26 (ENSDCDG00000013861) #23 CPXM2 (ENSDCDG00000013977) #24 CHST15 (ENSDCDG00000015706) #25 oat (ENSDCDG00000015712) #26 lhpp (ENSDCDG00000015724) #28 fam53b (ENSDCDG00000015728) #29 hpdl (ENSDCDG00000015733) ZRANB1 (ENSDCDG00000015747) #34 ENSDCDG00000015765 asb5a (ENSDCDG00000015774) prdm8 (ENSDCDG00000015784) mtg1 (ENSDCDG00000015788) sprn (ENSDCDG00000015792) echs1 (ENSDCDG00000015797) msx3 (ENSDCDG00000015829) Atlantic herring MODERN SPECIES 15 acbd4 (ENSCHAG00000019493) hexim1 (ENSCHAG00000019498) ARHGAP23 (ENSCHAG00000019508) ENSCHAG00000019536 LASP1 (ENSCHAG00000019549) plxdc1 (ENSCHAG00000019584) ENSCHAG00000020121 cox19 (ENSCHAG00000020141) RNPS1 (ENSCHAG00000020151) ENSCHAG00000020158 MBTD1 (ENSCHAG00000002547) ENSCHAG00000003108 #17 ACADSB (ENSCHAG00000003184) #19 CPXM2 (ENSCHAG00000004242) #24 oat (ENSCHAG00000005645) #26 bub3 (ENSCHAG00000006489) #22 ENSCHAG00000006576 ENSCHAG00000006707 ENSCHAG00000007158 ENSCHAG00000007279 ENSCHAG00000007292 zgc:92313 (ENSCHAG00000007297) mapk7 (ENSCHAG00000007309) vkorc1 (ENSCHAG00000007318) ENSCHAG00000007329 ENSCHAG00000007607 ENSCHAG00000008541 ENSCHAG00000008897 ENSCHAG00000008920 ENSCHAG00000008935 ENSCHAG00000008953 Spotted gar MODERN SPECIES 671 CCSER2 (ENSLOCG00000008422) GRID1 (ENSLOCG00000008385) ENSLOCG00000018237 ENSLOCG00000008373 WAPL (ENSLOCG00000008348) ENSLOCG00000008336 plekha1a (ENSLOCG00000008307) #9 htra1b (ENSLOCG00000008292) #10 ENSLOCG00000008280 C10orf88 (ENSLOCG00000008269) #16 zgc:174164 (ENSLOCG00000008238) ikzf5 (ENSLOCG00000008225) #18 ACADSB (ENSLOCG00000008211) #19 hmx3a (ENSLOCG00000008201) #20 hmx2 (ENSLOCG00000008191) #21 bub3 (ENSLOCG00000008177) #22 ENSLOCG00000008167 GPR26 (ENSLOCG00000008153) #23 CPXM2 (ENSLOCG00000008139) #24 CHST15 (ENSLOCG00000008128) #25 oat (ENSLOCG00000008099) #26 nkx1.2la (ENSLOCG00000008089) #27 lhpp (ENSLOCG00000008067) #28 fam53b (ENSLOCG00000008053) #29 eef1akmt2 (ENSLOCG00000008027) #31 abraxas2 (ENSLOCG00000008016) #32 hpdl (ENSLOCG00000008001) zranb1b (ENSLOCG00000007990) #34 ctbp2a (ENSLOCG00000007959) #35 TEX36 (ENSLOCG00000007946) #36 EDRF1 (ENSLOCG00000007911) #37 Reedfish MODERN SPECIES 10 ENSECRG00000008714 GRID1 (ENSECRG00000008736) ENSECRG00000008794 ENSECRG00000008800 PLEKHA1 (ENSECRG00000008829) #9 ENSECRG00000008875 htra1b (ENSECRG00000008896) #10 ENSECRG00000008962 C10orf88 (ENSECRG00000009015) #16 ENSECRG00000009032 PSTK (ENSECRG00000009054) #17 ikzf5 (ENSECRG00000009065) #18 ACADSB (ENSECRG00000009079) #19 hmx3a (ENSECRG00000009105) #20 hmx2 (ENSECRG00000009113) #21 bub3 (ENSECRG00000009120) #22 GPR26 (ENSECRG00000009127) #23 CPXM2 (ENSECRG00000009153) #24 CHST15 (ENSECRG00000009214) #25 ENSECRG00000009226 oat (ENSECRG00000009240) #26 nkx1.2la (ENSECRG00000009252) #27 lhpp (ENSECRG00000009271) #28 fam53b (ENSECRG00000009292) #29 eef1akmt2 (ENSECRG00000009306) #31 abraxas2 (ENSECRG00000009317) #32 hpdl (ENSECRG00000009330) zranb1b (ENSECRG00000009349) #34 ctbp2a (ENSECRG00000009364) #35 ENSECRG00000009392 ENSECRG00000009399 Elephant shark MODERN SPECIES 1600 nsmce4a (ENSCMIG00000007525) ENSCMIG00000007530 ly6pge (ENSCMIG00000007537) ENSCMIG00000007542 plekha1a (ENSCMIG00000007549) #9 htra1b (ENSCMIG00000007553) #10 ENSCMIG00000007557 ##13 ENSCMIG00000007561 C10orf88 (ENSCMIG00000007568) #16 ENSCMIG00000007576 PSTK (ENSCMIG00000007617) #17 ikzf5 (ENSCMIG00000007619) #18 ikzf5 (ENSCMIG00000007622) #18 ACADSB (ENSCMIG00000007641) #19 hmx3a (ENSCMIG00000007663) #20 bub3 (ENSCMIG00000007668) #22 GPR26 (ENSCMIG00000007672) #23 CPXM2 (ENSCMIG00000007686) #24 CHST15 (ENSCMIG00000007713) #25 oat (ENSCMIG00000007767) #26 ENSCMIG00000007805 abraxas2 (ENSCMIG00000007814) #32 fam53b (ENSCMIG00000007827) #29 eef1akmt2 (ENSCMIG00000007830) #31 hpdl (ENSCMIG00000007834) zranb1b (ENSCMIG00000007841) #34 ENSCMIG00000007855 #35 ENSCMIG00000007866 EDRF1 (ENSCMIG00000007899) #37 mmp21 (ENSCMIG00000007995) UROS (ENSCMIG00000008000) Cyclostomata ANCESTRAL SPECIES ENSGT00950000183091.A.a #22 Lamprey MODERN SPECIES 741 ENSPMAG00000007537 ENSPMAG00000007561 ADRA2C (ENSPMAG00000007563) bub3 (ENSPMAG00000007566) #22 Hagfish MODERN SPECIES 813 ENSEBUG00000014586 HUS1 (ENSEBUG00000011437) ENSEBUG00000005166 ENSEBUG00000010735 ENSEBUG00000001923 ENSEBUG00000016162 ENSEBUG00000005392 ENSEBUG00000015338 ENSEBUG00000000869 ENSEBUG00000016292 ENSEBUG00000006813 #19 ENSEBUG00000009044 ENSEBUG00000009685 zgc:152830 (ENSEBUG00000008419) ENSEBUG00000009524 bub3 (ENSEBUG00000013247) #22 pold2 (ENSEBUG00000004796) ENSEBUG00000008917 #23 Ciona ANCESTRAL SPECIES 1162 ENSGT00390000003964.b.a.a ENSGT00950000183091.A.a #22 Ciona savignyi MODERN SPECIES 334 ENSCSAVG00000000539 ENSCSAVG00000000548 ENSCSAVG00000000549 ENSCSAVG00000000550 ENSCSAVG00000000551 ENSCSAVG00000000553 ENSCSAVG00000000554 ENSCSAVG00000000555 ENSCSAVG00000000557 ENSCSAVG00000000558 ENSCSAVG00000000560 ENSCSAVG00000000628 ENSCSAVG00000000631 ENSCSAVG00000000632 ENSCSAVG00000000633 ENSCSAVG00000000634 #22 ENSCSAVG00000000663 ENSCSAVG00000000672 ENSCSAVG00000000715 ENSCSAVG00000000787 ENSCSAVG00000000789 ENSCSAVG00000000791 ENSCSAVG00000000795 ENSCSAVG00000000811 ENSCSAVG00000000812 ENSCSAVG00000000813 ENSCSAVG00000000816 ENSCSAVG00000000820 ENSCSAVG00000000823 ENSCSAVG00000000825 ENSCSAVG00000000828 Ciona intestinalis MODERN SPECIES 9 ENSCING00000012294 ENSCING00000018537 ENSCING00000022626 ENSCING00000009638 ENSCING00000009639 ENSCING00000009636 ENSCING00000023414 ENSCING00000009632 ENSCING00000009633 ENSCING00000009634 ENSCING00000009635 ENSCING00000019603 ENSCING00000022334 ENSCING00000022641 ENSCING00000024967 ENSCING00000009630 #22 ENSCING00000020450 ENSCING00000018175 ENSCING00000012290 ENSCING00000012292 ENSCING00000019815 ENSCING00000012291 ENSCING00000009631 ENSCING00000022393 ENSCING00000000333 ENSCING00000016274 ENSCING00000009427 ENSCING00000012284 ENSCING00000003872 ENSCING00000003868 ENSCING00000023632 Ecdysozoa ANCESTRAL SPECIES ENSGT00950000183091.A.a #22 Caenorhabditis elegans MODERN SPECIES 1 gst-17 (WBGene00001765) gst-18 (WBGene00001766) tag-10 (WBGene00006404) C31C9.2 (WBGene00007836) fbxa-167 (WBGene00007837) fbxa-169 (WBGene00045289) C31C9.9 (WBGene00305095) C31C9.6 (WBGene00007840) C31C9.7 (WBGene00007841) rpoa-1 (WBGene00012999) kqt-3 (WBGene00002235) zipt-2.3 (WBGene00013207) sre-46 (WBGene00044084) Y54G9A.5 (WBGene00013208) Y54G9A.7 (WBGene00013210) bub-3 (WBGene00013209) #22 Y54G9A.9 (WBGene00013211) R06B9.5 (WBGene00011056) mig-14 (WBGene00003246) arrd-14 (WBGene00011055) arrd-13 (WBGene00011054) arrd-11 (WBGene00011052) arrd-12 (WBGene00011053) C01B9.4 (WBGene00194890) C01B9.1 (WBGene00007220) ZK131.11 (WBGene00013934) his-16 (WBGene00001890) his-15 (WBGene00001889) his-14 (WBGene00001888) his-13 (WBGene00001887) his-12 (WBGene00001886) Fruitfly MODERN SPECIES 19 CG7601 (FBgn0027583) Kul (FBgn0039688) CG18731 (FBgn0042213) Naa40 (FBgn0039687) Pcd (FBgn0024841) CG34296 (FBgn0085325) CG15506 (FBgn0039686) Obp99b (FBgn0039685) Dup99B (FBgn0250832) Obp99d (FBgn0039684) dmrt99B (FBgn0039683) Obp99c (FBgn0039682) Gycalpha99B (FBgn0013972) CG7582 (FBgn0039681) Cap-D2 (FBgn0039680) Bub3 (FBgn0025457) #22 ppk19 (FBgn0039679) Obp99a (FBgn0039678) ppk30 (FBgn0039677) ppk20 (FBgn0039676) ppk21 (FBgn0039675) Dop1R2 (FBgn0266137) CG1907 (FBgn0039674) Diedel2 (FBgn0262873) CG7568 (FBgn0039673) alph (FBgn0086361) CG31041 (FBgn0051041) CG11470 (FBgn0039671) CG7567 (FBgn0039670) Dr (FBgn0000492) ND-20L (FBgn0039669) Bilateria ANCESTRAL SPECIES ENSGT00950000183091.A.b ##22 Chordata ANCESTRAL SPECIES ENSGT00950000183091.A.b ##22 Ciona ANCESTRAL SPECIES 1161 ENSGT00530000069026 ENSGT00950000183091.A.b ##22 Ciona intestinalis MODERN SPECIES 33 ENSCING00000019968 ENSCING00000013861 ENSCING00000014882 ENSCING00000014883 ENSCING00000010058 ENSCING00000014885 ENSCING00000022776 ENSCING00000007593 ENSCING00000007594 ENSCING00000014886 ENSCING00000013862 ENSCING00000014867 ENSCING00000014878 ENSCING00000014879 ENSCING00000007588 ENSCING00000021737 ##22 ENSCING00000007589 ENSCING00000024561 ENSCING00000023168 ENSCING00000014837 ENSCING00000021614 ENSCING00000007587 ENSCING00000018791 ENSCING00000014835 ENSCING00000007586 ENSCING00000015372 ENSCING00000022398 ENSCING00000014833 ENSCING00000007584 ENSCING00000010433 ENSCING00000019422 Ciona savignyi MODERN SPECIES 129 ENSCSAVG00000004449 ENSCSAVG00000004456 ENSCSAVG00000004463 ENSCSAVG00000004472 ENSCSAVG00000004476 ENSCSAVG00000004488 ENSCSAVG00000004492 ENSCSAVG00000004502 ENSCSAVG00000004505 ENSCSAVG00000004524 ENSCSAVG00000004564 ENSCSAVG00000004570 ENSCSAVG00000004573 ENSCSAVG00000004642 ENSCSAVG00000004646 ENSCSAVG00000004647 ##22 ENSCSAVG00000004683 ENSCSAVG00000004866 ENSCSAVG00000004869 ENSCSAVG00000004872 ENSCSAVG00000004876 ENSCSAVG00000004879 ENSCSAVG00000004882 ENSCSAVG00000004884 ENSCSAVG00000004887 ENSCSAVG00000004890 ENSCSAVG00000004894 ENSCSAVG00000004896 ENSCSAVG00000004901 ENSCSAVG00000004905 ENSCSAVG00000004910 Vertebrata ANCESTRAL SPECIES ENSGT00950000183091.A.b ##22 Cyclostomata ANCESTRAL SPECIES ENSGT00950000183091.A.b ##22 Lamprey MODERN SPECIES 5365 dnaaf10 (ENSPMAG00000005724) ##22 Hagfish MODERN SPECIES 709 dnaaf10 (ENSEBUG00000004117) ##22 fh (ENSEBUG00000011418) ENSEBUG00000002402 kmo (ENSEBUG00000013555) zgc:162698 (ENSEBUG00000005102) Gnathostomata ANCESTRAL SPECIES 86 ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000159704 ENSGT00940000157404 ENSGT00940000162838 ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 Elephant shark MODERN SPECIES 1508 flrt3 (ENSCMIG00000020017) ENSCMIG00000020016 ENSCMIG00000020015 KIF16B (ENSCMIG00000020010) OTOR (ENSCMIG00000020008) pcsk2 (ENSCMIG00000020007) BFSP1 (ENSCMIG00000020006) PROKR1 (ENSCMIG00000020005) tufm (ENSCMIG00000020003) ENSCMIG00000020002 fbxo48 (ENSCMIG00000020001) plek (ENSCMIG00000019999) cnrip1a (ENSCMIG00000019998) ppp3r1a (ENSCMIG00000019996) pno1 (ENSCMIG00000019995) dnaaf10 (ENSCMIG00000019994) ##22 c1d (ENSCMIG00000019993) ENSCMIG00000019992 ENSCMIG00000019991 Euteleostomi ANCESTRAL SPECIES 5 ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Sarcopterygii ANCESTRAL SPECIES 54 ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00660000097267 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00950000183045.C ENSGT00940000153230.A ENSGT00940000156167.b ENSGT00390000009223 ENSGT00940000159851 ENSGT00910000144159.B ENSGT00940000166667 ENSGT00940000158602 Coelacanth MODERN SPECIES 1354 DNAAF10 (ENSLACG00000003030) ##22 PNO1 (ENSLACG00000004983) ENSLACG00000006183 C1D (ENSLACG00000007516) Tetrapoda ANCESTRAL SPECIES 15 ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Anura ANCESTRAL SPECIES 16 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000176188 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000154347.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Frog MODERN SPECIES 5 macrod2 (ENSXETG00000034883) flrt3 (ENSXETG00000008706) ENSXETG00000048798 kif16b (ENSXETG00000003551) snrpb2 (ENSXETG00000003550) otor (ENSXETG00000003548) pcsk2 (ENSXETG00000003545) bfsp1 (ENSXETG00000003544) ENSXETG00000017361 aplf (ENSXETG00000025938) fbxo48 (ENSXETG00000037084) plek (ENSXETG00000017358) cnrip1 (ENSXETG00000035745) ppp3r1 (ENSXETG00000017355) pno1 (ENSXETG00000017349) dnaaf10 (ENSXETG00000046703) ##22 c1d (ENSXETG00000025934) etaa1 (ENSXETG00000025932) meis1 (ENSXETG00000011473) ENSXETG00000044979 spred2 (ENSXETG00000014000) actr2 (ENSXETG00000014001) rab1a (ENSXETG00000014011) cep68 (ENSXETG00000031207) slc1a4 (ENSXETG00000014014) sertad2 (ENSXETG00000014022) aftph (ENSXETG00000014023) ENSXETG00000036875 sys1 (ENSXETG00000047554) lgalsl (ENSXETG00000025808) ENSXETG00000044468 Leishan spiny toad MODERN SPECIES 7 ENSLLEG00000011365 ENSLLEG00000011270 SUSD4 (ENSLLEG00000011152) ENSLLEG00000011106 ENSLLEG00000011094 ENSLLEG00000011049 ENSLLEG00000011025 ENSLLEG00000010919 ENSLLEG00000010894 ENSLLEG00000010885 ENSLLEG00000010836 ENSLLEG00000010796 CNRIP1 (ENSLLEG00000010763) PPP3R1 (ENSLLEG00000010614) PNO1 (ENSLLEG00000010509) DNAAF10 (ENSLLEG00000010419) ##22 C1D (ENSLLEG00000010381) ENSLLEG00000010364 ENSLLEG00000010276 ENSLLEG00000010259 MEIS1 (ENSLLEG00000009890) ENSLLEG00000009839 SPRED2 (ENSLLEG00000009649) ENSLLEG00000009622 ACTR2 (ENSLLEG00000009396) RAB1B (ENSLLEG00000009169) ENSLLEG00000009114 SLC1A4 (ENSLLEG00000009051) SERTAD2 (ENSLLEG00000009029) AFTPH (ENSLLEG00000008756) SYS1 (ENSLLEG00000008712) Amniota ANCESTRAL SPECIES 12 ENSGT00940000159704 ENSGT00940000162977 ENSGT00940000170045 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Sauria ANCESTRAL SPECIES 1 ENSGT00940000159704 ENSGT00940000162977 ENSGT00940000170045 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Lepidosauria ANCESTRAL SPECIES 69 ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A.h ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Episquamata ANCESTRAL SPECIES ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A.h ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Toxicofera ANCESTRAL SPECIES ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A.h ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT01100000263484.C.a.l ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Elapidae ANCESTRAL SPECIES ENSGT00390000014687 ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A.h ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT01100000263484.C.a.l ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Elapidae_a ANCESTRAL SPECIES 6 ENSGT00390000014687 ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A.h ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT01100000263484.C.a.l ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Acanthophiinae ANCESTRAL SPECIES 8 ENSGT00390000014687 ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A.h ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT01100000263484.C.a.l ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Eastern brown snake MODERN SPECIES 56 NDUFAF5 (ENSPTXG00000005878) SEL1L2 (ENSPTXG00000005877) ENSPTXG00000005876 FLRT3 (ENSPTXG00000005875) KIF16B (ENSPTXG00000005874) SNRPB2 (ENSPTXG00000005873) PCSK2 (ENSPTXG00000005804) BFSP1 (ENSPTXG00000005802) ENSPTXG00000005800 ENSPTXG00000005799 FBXO48 (ENSPTXG00000005797) PLEK (ENSPTXG00000005794) CNRIP1 (ENSPTXG00000005792) PPP3R1 (ENSPTXG00000005790) PNO1 (ENSPTXG00000005788) DNAAF10 (ENSPTXG00000005787) ##22 C1D (ENSPTXG00000005785) MEIS1 (ENSPTXG00000005783) SPRED2 (ENSPTXG00000005781) ACTR2 (ENSPTXG00000005779) RAB1A (ENSPTXG00000005777) ENSPTXG00000005775 SLC1A4 (ENSPTXG00000005773) SERTAD2 (ENSPTXG00000005772) ENSPTXG00000005770 AFTPH (ENSPTXG00000006529) MLNR (ENSPTXG00000006528) LGALSL (ENSPTXG00000006527) PELI1 (ENSPTXG00000006526) VPS54 (ENSPTXG00000006525) UGP2 (ENSPTXG00000006524) Mainland tiger snake MODERN SPECIES 23 ESF1 (ENSNSUG00000019193) NDUFAF5 (ENSNSUG00000019192) ENSNSUG00000019191 FLRT3 (ENSNSUG00000019190) KIF16B (ENSNSUG00000019188) SNRPB2 (ENSNSUG00000019187) PCSK2 (ENSNSUG00000019186) BFSP1 (ENSNSUG00000019185) ENSNSUG00000019184 ENSNSUG00000019182 FBXO48 (ENSNSUG00000019181) PLEK (ENSNSUG00000019180) CNRIP1 (ENSNSUG00000019179) PPP3R1 (ENSNSUG00000019177) PNO1 (ENSNSUG00000019176) DNAAF10 (ENSNSUG00000019175) ##22 C1D (ENSNSUG00000019174) MEIS1 (ENSNSUG00000019167) SPRED2 (ENSNSUG00000019166) ACTR2 (ENSNSUG00000019165) RAB1A (ENSNSUG00000019164) ENSNSUG00000019162 SLC1A4 (ENSNSUG00000019138) ENSNSUG00000019136 SERTAD2 (ENSNSUG00000019135) ENSNSUG00000019134 AFTPH (ENSNSUG00000019132) MLNR (ENSNSUG00000019125) LGALSL (ENSNSUG00000019124) PELI1 (ENSNSUG00000019123) VPS54 (ENSNSUG00000019122) Blue-lipped sea krait MODERN SPECIES 6669 PPP3R1 (ENSLLTG00000007034) PNO1 (ENSLLTG00000007064) DNAAF10 (ENSLLTG00000007087) ##22 C1D (ENSLLTG00000007121) Indian cobra MODERN SPECIES NDUFAF5 (ENSNNAG00000012005) SEL1L2 (ENSNNAG00000012056) ENSNNAG00000012226 FLRT3 (ENSNNAG00000012260) SNRPB2 (ENSNNAG00000012519) PCSK2 (ENSNNAG00000012540) BFSP1 (ENSNNAG00000012581) ENSNNAG00000012694 ENSNNAG00000012745 FBXO48 (ENSNNAG00000012774) PLEK (ENSNNAG00000012798) CNRIP1 (ENSNNAG00000012863) ENSNNAG00000012878 PPP3R1 (ENSNNAG00000012886) PNO1 (ENSNNAG00000012918) DNAAF10 (ENSNNAG00000012936) ##22 C1D (ENSNNAG00000012988) MEIS1 (ENSNNAG00000013019) SPRED2 (ENSNNAG00000013140) ACTR2 (ENSNNAG00000013219) RAB1A (ENSNNAG00000013227) ENSNNAG00000013240 SLC1A4 (ENSNNAG00000013270) SERTAD2 (ENSNNAG00000013335) ENSNNAG00000013342 ENSNNAG00000013378 MLNR (ENSNNAG00000013400) LGALSL (ENSNNAG00000013404) ENSNNAG00000013415 PELI1 (ENSNNAG00000013434) VPS54 (ENSNNAG00000013453) Lizard MODERN SPECIES ENSACAG00000037955 ENSACAG00000040491 ENSACAG00000044399 KIF16B (ENSACAG00000000407) SNRPB2 (ENSACAG00000000582) OTOR (ENSACAG00000000633) PCSK2 (ENSACAG00000000663) BFSP1 (ENSACAG00000027235) ENSACAG00000000824 APLF (ENSACAG00000000856) FBXO48 (ENSACAG00000000867) PLEK (ENSACAG00000000871) CNRIP1 (ENSACAG00000000999) ENSACAG00000040514 PNO1 (ENSACAG00000001218) DNAAF10 (ENSACAG00000001044) ##22 C1D (ENSACAG00000001337) ENSACAG00000038561 MEIS1 (ENSACAG00000002083) SPRED2 (ENSACAG00000002009) ACTR2 (ENSACAG00000001918) ENSACAG00000001866 RAB1A (ENSACAG00000042522) ENSACAG00000001863 SLC1A4 (ENSACAG00000001717) SERTAD2 (ENSACAG00000001714) AFTPH (ENSACAG00000001654) ENSACAG00000001649 LGALSL (ENSACAG00000001605) COL6A3 (ENSACAG00000004231) ENSACAG00000040968 Laterata ANCESTRAL SPECIES 13 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00940000156327 ENSGT00940000156841 ENSGT00810000125473.A.h ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a ENSGT00390000016551 ENSGT00940000161234 Common wall lizard MODERN SPECIES 11 ATP7B (ENSPMRG00000003287) ENSPMRG00000003121 ENSPMRG00000003114 ENSPMRG00000003092 ENSPMRG00000003079 WDFY2 (ENSPMRG00000003050) SERPINE3 (ENSPMRG00000003015) FAM124A (ENSPMRG00000002997) ENSPMRG00000002991 APLF (ENSPMRG00000002973) FBXO48 (ENSPMRG00000002967) PLEK (ENSPMRG00000002960) CNRIP1 (ENSPMRG00000002954) PPP3R1 (ENSPMRG00000002950) ENSPMRG00000002943 DNAAF10 (ENSPMRG00000002932) ##22 C1D (ENSPMRG00000002925) ENSPMRG00000002914 ENSPMRG00000002903 MEIS1 (ENSPMRG00000002862) ENSPMRG00000002838 SPRED2 (ENSPMRG00000002817) ACTR2 (ENSPMRG00000002797) ENSPMRG00000002778 RAB1A (ENSPMRG00000002764) CEP68 (ENSPMRG00000002741) SLC1A4 (ENSPMRG00000002725) ENSPMRG00000002716 ENSPMRG00000002707 ENSPMRG00000002706 SERTAD2 (ENSPMRG00000002700) Argentine black and white tegu MODERN SPECIES 54 PCSK2 (ENSSMRG00000005118) ENSSMRG00000005140 BFSP1 (ENSSMRG00000005154) ENSSMRG00000005206 APLF (ENSSMRG00000005216) FBXO48 (ENSSMRG00000005221) PLEK (ENSSMRG00000005222) CNRIP1 (ENSSMRG00000005226) PPP3R1 (ENSSMRG00000005229) PNO1 (ENSSMRG00000005236) DNAAF10 (ENSSMRG00000005245) ##22 C1D (ENSSMRG00000005249) MEIS1 (ENSSMRG00000005267) ENSSMRG00000005283 ENSSMRG00000005289 SPRED2 (ENSSMRG00000005297) ENSSMRG00000005300 ENSSMRG00000005304 ACTR2 (ENSSMRG00000005307) ENSSMRG00000005312 RAB1A (ENSSMRG00000005319) ENSSMRG00000005322 SLC1A4 (ENSSMRG00000005324) SERTAD2 (ENSSMRG00000005372) AFTPH (ENSSMRG00000005377) ENSSMRG00000005383 tuatara MODERN SPECIES 1468 ENSSPUG00000006778 KIF16B (ENSSPUG00000006740) SNRPB2 (ENSSPUG00000006720) OTOR (ENSSPUG00000006709) ENSSPUG00000006695 PCSK2 (ENSSPUG00000006679) BFSP1 (ENSSPUG00000006654) ENSSPUG00000006645 APLF (ENSSPUG00000006632) FBXO48 (ENSSPUG00000006622) PLEK (ENSSPUG00000006613) CNRIP1 (ENSSPUG00000006600) PPP3R1 (ENSSPUG00000006573) PNO1 (ENSSPUG00000006562) DNAAF10 (ENSSPUG00000006542) ##22 C1D (ENSSPUG00000006525) ENSSPUG00000006516 MEIS1 (ENSSPUG00000006452) Archelosauria ANCESTRAL SPECIES 1 ENSGT00940000159704 ENSGT00940000162977 ENSGT00940000170045 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Archosauria ANCESTRAL SPECIES 29 ENSGT00940000159704 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Aves ANCESTRAL SPECIES 35 ENSGT00940000159704 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Neognathae ANCESTRAL SPECIES 32 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT01040000241398.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Galloanserae ANCESTRAL SPECIES 29 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT01040000241398.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Anatidae ANCESTRAL SPECIES 60 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Pink-footed goose MODERN SPECIES 155 APLF (ENSABRG00000002483) FBXO48 (ENSABRG00000002508) PLEK (ENSABRG00000002514) CNRIP1 (ENSABRG00000002531) PPP3R1 (ENSABRG00000002543) PNO1 (ENSABRG00000002566) DNAAF10 (ENSABRG00000002587) ##22 C1D (ENSABRG00000002604) ENSABRG00000002625 ENSABRG00000002632 ENSABRG00000002656 MEIS1 (ENSABRG00000002723) SPRED2 (ENSABRG00000002801) ACTR2 (ENSABRG00000002811) RAB1A (ENSABRG00000002833) CEP68 (ENSABRG00000002866) SLC1A4 (ENSABRG00000002879) SERTAD2 (ENSABRG00000002908) AFTPH (ENSABRG00000002918) LGALSL (ENSABRG00000002936) PELI1 (ENSABRG00000002957) Duck MODERN SPECIES 21 FOXA2 (ENSAPLG00000024325) PAX1 (ENSAPLG00000021065) XRN2 (ENSAPLG00000013869) KIZ (ENSAPLG00000013782) RALGAPA2 (ENSAPLG00000013547) ENSAPLG00000029177 CFAP61 (ENSAPLG00000013456) CRNKL1 (ENSAPLG00000013105) ENSAPLG00000024100 RIN2 (ENSAPLG00000014865) APLF (ENSAPLG00000009117) PLEK (ENSAPLG00000009140) CNRIP1 (ENSAPLG00000022779) PPP3R1 (ENSAPLG00000023228) PNO1 (ENSAPLG00000029102) DNAAF10 (ENSAPLG00000029023) ##22 C1D (ENSAPLG00000009320) ENSAPLG00000025999 MEIS1 (ENSAPLG00000009141) SPRED2 (ENSAPLG00000009387) ACTR2 (ENSAPLG00000009440) RAB1A (ENSAPLG00000018342) CEP68 (ENSAPLG00000016942) SLC1A4 (ENSAPLG00000009621) SERTAD2 (ENSAPLG00000000672) AFTPH (ENSAPLG00000009640) ENSAPLG00000017313 LGALSL (ENSAPLG00000022507) PELI1 (ENSAPLG00000009701) VPS54 (ENSAPLG00000009734) UGP2 (ENSAPLG00000009870) Phasianidae ANCESTRAL SPECIES 29 ENSGT00940000159704 ENSGT00940000157404 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT01040000241398.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Japanese quail MODERN SPECIES 21 PCSK2 (ENSCJPG00005011465) BFSP1 (ENSCJPG00005011467) ENSCJPG00005011482 ENSCJPG00005011483 ENSCJPG00005011484 PLEK (ENSCJPG00005011490) CNRIP1 (ENSCJPG00005011494) PPP3R1 (ENSCJPG00005011495) PNO1 (ENSCJPG00005011496) DNAAF10 (ENSCJPG00005011497) ##22 C1D (ENSCJPG00005011500) ENSCJPG00005011513 MEIS1 (ENSCJPG00005011532) SPRED2 (ENSCJPG00005011544) ACTR2 (ENSCJPG00005011545) RAB1A (ENSCJPG00005011546) CEP68 (ENSCJPG00005011547) SLC1A4 (ENSCJPG00005011555) SERTAD2 (ENSCJPG00005011560) AFTPH (ENSCJPG00005011562) ENSCJPG00005011566 ENSCJPG00005011568 ENSCJPG00005011569 PELI1 (ENSCJPG00005011590) VPS54 (ENSCJPG00005011596) Phasianidae_b ANCESTRAL SPECIES 28 ENSGT00940000159704 ENSGT00940000157404 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT01040000241398.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Turkey MODERN SPECIES 11 ENSMGAG00000018035 FLRT3 (ENSMGAG00000015897) KIF16B (ENSMGAG00000006109) SNRPB2 (ENSMGAG00000006135) OTOR (ENSMGAG00000006158) PCSK2 (ENSMGAG00000004353) BFSP1 (ENSMGAG00000004415) ENSMGAG00000004402 ENSMGAG00000018645 ENSMGAG00000004419 FBXO48 (ENSMGAG00000004427) PLEK (ENSMGAG00000004436) CNRIP1 (ENSMGAG00000004456) PPP3R1 (ENSMGAG00000004474) PNO1 (ENSMGAG00000004514) DNAAF10 (ENSMGAG00000004517) ##22 ENSMGAG00000004531 MEIS1 (ENSMGAG00000021593) SPRED2 (ENSMGAG00000004563) ACTR2 (ENSMGAG00000004587) ENSMGAG00000019067 RAB1A (ENSMGAG00000004611) CEP68 (ENSMGAG00000004667) SLC1A4 (ENSMGAG00000004682) SERTAD2 (ENSMGAG00000015908) AFTPH (ENSMGAG00000004693) ENSMGAG00000019014 LGALSL (ENSMGAG00000004734) PELI1 (ENSMGAG00000019753) VPS54 (ENSMGAG00000004768) UGP2 (ENSMGAG00000004824) Chicken MODERN SPECIES 22 TASP1 (ENSGALG00010018089) NDUFAF5 (ENSGALG00010018061) ITPKB (ENSGALG00010018058) PSEN2 (ENSGALG00010018045) COQ8A (ENSGALG00010018033) CDC42BPA (ENSGALG00010018004) PCSK2 (ENSGALG00010017927) BFSP1 (ENSGALG00010017915) PROKR1 (ENSGALG00010017887) APLF (ENSGALG00010017867) FBXO48 (ENSGALG00010017849) PLEK (ENSGALG00010017831) CNRIP1 (ENSGALG00010017787) PPP3R1 (ENSGALG00010017778) PNO1 (ENSGALG00010017771) DNAAF10 (ENSGALG00010017766) ##22 C1D (ENSGALG00010017755) ETAA1 (ENSGALG00010017744) ENSGALG00010017728 ENSGALG00010017722 MEIS1 (ENSGALG00010017708) SPRED2 (ENSGALG00010017672) ACTR2 (ENSGALG00010016276) ENSGALG00010017627 RAB1B (ENSGALG00010017622) CEP68 (ENSGALG00010017594) SLC1A4 (ENSGALG00010019257) SERTAD2 (ENSGALG00010019243) ENSGALG00010017151 AFTPH (ENSGALG00010017141) LGALSL (ENSGALG00010017115) Neognathae_b ANCESTRAL SPECIES 32 ENSGT00940000159704 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Passeriformes ANCESTRAL SPECIES 31 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00390000018199.b.c.b ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Great tit MODERN SPECIES 22 FLRT3 (ENSPMJG00000001325) ENSPMJG00000001339 ENSPMJG00000001425 SNRPB2 (ENSPMJG00000001585) OTOR (ENSPMJG00000001589) PCSK2 (ENSPMJG00000001625) BFSP1 (ENSPMJG00000001637) ENSPMJG00000001644 APLF (ENSPMJG00000001658) ENSPMJG00000001662 FBXO48 (ENSPMJG00000001663) PLEK (ENSPMJG00000001665) CNRIP1 (ENSPMJG00000001670) PPP3R1 (ENSPMJG00000001689) PNO1 (ENSPMJG00000001695) DNAAF10 (ENSPMJG00000001703) ##22 C1D (ENSPMJG00000001708) ENSPMJG00000001774 MEIS1 (ENSPMJG00000001854) SPRED2 (ENSPMJG00000002067) ACTR2 (ENSPMJG00000002085) RAB1A (ENSPMJG00000002113) CEP68 (ENSPMJG00000002124) SLC1A4 (ENSPMJG00000002145) SERTAD2 (ENSPMJG00000002211) AFTPH (ENSPMJG00000002220) ENSPMJG00000002259 LGALSL (ENSPMJG00000002274) PELI1 (ENSPMJG00000002305) VPS54 (ENSPMJG00000002369) UGP2 (ENSPMJG00000002442) Passeriformes_d ANCESTRAL SPECIES 32 ENSGT00390000014687 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000156965 ENSGT00390000016976 ENSGT00390000018199.b.c.b.a ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Flycatcher MODERN SPECIES 21 DSTN (ENSFALG00000029095) ENSFALG00000026638 ENSFALG00000013671 SNRPB2 (ENSFALG00000013668) ENSFALG00000013666 ENSFALG00000013664 ENSFALG00000026914 BFSP1 (ENSFALG00000013661) ENSFALG00000013658 PROKR1 (ENSFALG00000027536) APLF (ENSFALG00000013652) ENSFALG00000028459 PLEK (ENSFALG00000013650) CNRIP1 (ENSFALG00000027124) PPP3R1 (ENSFALG00000013648) WDR92 (ENSFALG00000028071) ##22 PNO1 (ENSFALG00000029069) C1D (ENSFALG00000024869) ENSFALG00000013638 MEIS1 (ENSFALG00000013636) SPRED2 (ENSFALG00000028802) ACTR2 (ENSFALG00000026727) ENSFALG00000027263 RAB1A (ENSFALG00000023532) CEP68 (ENSFALG00000013621) SLC1A4 (ENSFALG00000013619) SERTAD2 (ENSFALG00000014149) ENSFALG00000028308 AFTPH (ENSFALG00000013616) LGALSL (ENSFALG00000013611) PELI1 (ENSFALG00000013605) Passeriformes_g ANCESTRAL SPECIES 42 ENSGT00390000014687 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000156965 ENSGT00390000016976 ENSGT00390000018199.b.c.b.a ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Passeroidea ANCESTRAL SPECIES 41 ENSGT00390000014687 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000156965 ENSGT00390000016976 ENSGT00390000018199.b.c.b.a ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Common canary MODERN SPECIES 38 FBXO48 (ENSSCAG00000001107) PLEK (ENSSCAG00000001096) CNRIP1 (ENSSCAG00000001087) PPP3R1 (ENSSCAG00000001078) PNO1 (ENSSCAG00000001058) DNAAF10 (ENSSCAG00000001039) ##22 C1D (ENSSCAG00000001030) ENSSCAG00000001019 ENSSCAG00000001007 MEIS1 (ENSSCAG00000000987) SPRED2 (ENSSCAG00000000973) ACTR2 (ENSSCAG00000000959) RAB1A (ENSSCAG00000000941) CEP68 (ENSSCAG00000000934) SLC1A4 (ENSSCAG00000000927) SERTAD2 (ENSSCAG00000000919) ENSSCAG00000000909 AFTPH (ENSSCAG00000000895) LGALSL (ENSSCAG00000000875) PELI1 (ENSSCAG00000000846) VPS54 (ENSSCAG00000000820) Zebra finch MODERN SPECIES 23 ENSTGUG00000022278 ENSTGUG00000002422 ENSTGUG00000020896 ENSTGUG00000023714 ENSTGUG00000028808 PCSK2 (ENSTGUG00000002403) BFSP1 (ENSTGUG00000002401) ENSTGUG00000002397 ENSTGUG00000028491 APLF (ENSTGUG00000028592) FBXO48 (ENSTGUG00000026746) PLEK (ENSTGUG00000002380) CNRIP1 (ENSTGUG00000021224) PPP3R1 (ENSTGUG00000018231) PNO1 (ENSTGUG00000002369) DNAAF10 (ENSTGUG00000018213) ##22 C1D (ENSTGUG00000029046) ENSTGUG00000002363 MEIS1 (ENSTGUG00000002353) SPRED2 (ENSTGUG00000025635) ACTR2 (ENSTGUG00000002335) RAB1A (ENSTGUG00000002328) CEP68 (ENSTGUG00000029210) SLC1A4 (ENSTGUG00000002315) SERTAD2 (ENSTGUG00000024469) AFTPH (ENSTGUG00000002302) ENSTGUG00000025533 LGALSL (ENSTGUG00000025180) PELI1 (ENSTGUG00000002289) VPS54 (ENSTGUG00000002268) UGP2 (ENSTGUG00000002252) Medium ground finch MODERN SPECIES 99 SNRPB2 (ENSGFOG00000007717) PCSK2 (ENSGFOG00000007699) BFSP1 (ENSGFOG00000007688) ENSGFOG00000007642 ENSGFOG00000007636 APLF (ENSGFOG00000007622) FBXO48 (ENSGFOG00000007610) PLEK (ENSGFOG00000007591) CNRIP1 (ENSGFOG00000007585) PPP3R1 (ENSGFOG00000007577) PNO1 (ENSGFOG00000007572) DNAAF10 (ENSGFOG00000007564) ##22 C1D (ENSGFOG00000007555) ENSGFOG00000007544 MEIS1 (ENSGFOG00000007474) SPRED2 (ENSGFOG00000007456) ACTR2 (ENSGFOG00000007444) RAB1A (ENSGFOG00000007437) CEP68 (ENSGFOG00000007430) SLC1A4 (ENSGFOG00000007417) SERTAD2 (ENSGFOG00000007413) ENSGFOG00000007408 AFTPH (ENSGFOG00000007395) LGALSL (ENSGFOG00000007383) PELI1 (ENSGFOG00000007371) VPS54 (ENSGFOG00000011155) UGP2 (ENSGFOG00000011150) Neognathae_c ANCESTRAL SPECIES 35 ENSGT00940000159704 ENSGT00940000170045 ENSGT00940000162838 ENSGT00940000162977 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Kakapo MODERN SPECIES 23 ENSSHBG00005015695 ENSSHBG00005015373 SNRPB2 (ENSSHBG00005015326) OTOR (ENSSHBG00005015318) ENSSHBG00005015311 PCSK2 (ENSSHBG00005015307) BFSP1 (ENSSHBG00005015297) ENSSHBG00005015289 ENSSHBG00005015282 APLF (ENSSHBG00005015272) FBXO48 (ENSSHBG00005015269) PLEK (ENSSHBG00005015261) CNRIP1 (ENSSHBG00005015258) PPP3R1 (ENSSHBG00005015250) PNO1 (ENSSHBG00005015242) DNAAF10 (ENSSHBG00005015235) ##22 C1D (ENSSHBG00005015222) ENSSHBG00005015207 MEIS1 (ENSSHBG00005015189) ENSSHBG00005015181 SPRED2 (ENSSHBG00005015173) ACTR2 (ENSSHBG00005015166) RAB1A (ENSSHBG00005015159) CEP68 (ENSSHBG00005015142) SLC1A4 (ENSSHBG00005015130) SERTAD2 (ENSSHBG00005015121) ENSSHBG00005015104 AFTPH (ENSSHBG00005015097) LGALSL (ENSSHBG00005015090) PELI1 (ENSSHBG00005015086) ENSSHBG00005015079 Golden eagle MODERN SPECIES 24 ENSACCG00020006494 FLRT3 (ENSACCG00020006489) ENSACCG00020006473 KIF16B (ENSACCG00020006377) SNRPB2 (ENSACCG00020006344) OTOR (ENSACCG00020006336) PCSK2 (ENSACCG00020006307) BFSP1 (ENSACCG00020006284) ENSACCG00020006272 APLF (ENSACCG00020006257) FBXO48 (ENSACCG00020006254) PLEK (ENSACCG00020006245) CNRIP1 (ENSACCG00020006234) PPP3R1 (ENSACCG00020006223) PNO1 (ENSACCG00020006212) DNAAF10 (ENSACCG00020006200) ##22 C1D (ENSACCG00020006189) ENSACCG00020006175 MEIS1 (ENSACCG00020006130) SPRED2 (ENSACCG00020006109) ACTR2 (ENSACCG00020006080) RAB1A (ENSACCG00020006051) CEP68 (ENSACCG00020006029) SLC1A4 (ENSACCG00020006005) SERTAD2 (ENSACCG00020005994) ENSACCG00020005980 AFTPH (ENSACCG00020005956) LGALSL (ENSACCG00020005930) PELI1 (ENSACCG00020005906) VPS54 (ENSACCG00020005801) UGP2 (ENSACCG00020005728) African ostrich MODERN SPECIES 1035 ENSSCUG00000016844 APLF (ENSSCUG00000016843) FBXO48 (ENSSCUG00000016842) PLEK (ENSSCUG00000016840) CNRIP1 (ENSSCUG00000016838) PPP3R1 (ENSSCUG00000016836) PNO1 (ENSSCUG00000016819) DNAAF10 (ENSSCUG00000016805) ##22 C1D (ENSSCUG00000016803) ENSSCUG00000016796 ENSSCUG00000016785 SPRED2 (ENSSCUG00000016776) ACTR2 (ENSSCUG00000016771) RAB1A (ENSSCUG00000016768) ENSSCUG00000016764 SLC1A4 (ENSSCUG00000016756) SERTAD2 (ENSSCUG00000016748) ENSSCUG00000016745 AFTPH (ENSSCUG00000016739) LGALSL (ENSSCUG00000016734) PELI1 (ENSSCUG00000016725) VPS54 (ENSSCUG00000016720) UGP2 (ENSSCUG00000016718) Australian saltwater crocodile MODERN SPECIES 60 ENSCPRG00005012379 FLRT3 (ENSCPRG00005012390) ENSCPRG00005012460 KIF16B (ENSCPRG00005012529) SNRPB2 (ENSCPRG00005012601) OTOR (ENSCPRG00005012606) PCSK2 (ENSCPRG00005012678) BFSP1 (ENSCPRG00005012685) ENSCPRG00005012710 APLF (ENSCPRG00005012739) FBXO48 (ENSCPRG00005012746) PLEK (ENSCPRG00005012755) CNRIP1 (ENSCPRG00005012769) PPP3R1 (ENSCPRG00005012773) PNO1 (ENSCPRG00005012776) DNAAF10 (ENSCPRG00005012802) ##22 C1D (ENSCPRG00005012813) ENSCPRG00005012839 MEIS1 (ENSCPRG00005012878) ENSCPRG00005012911 SPRED2 (ENSCPRG00005012941) ACTR2 (ENSCPRG00005012952) ENSCPRG00005012975 RAB1A (ENSCPRG00005012987) CEP68 (ENSCPRG00005012992) SLC1A4 (ENSCPRG00005013000) SERTAD2 (ENSCPRG00005013016) AFTPH (ENSCPRG00005013021) ENSCPRG00005013030 LGALSL (ENSCPRG00005013037) ENSCPRG00005013039 Cryptodira ANCESTRAL SPECIES 49 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Chinese turtle MODERN SPECIES 375 APLF (ENSPSIG00000011567) FBXO48 (ENSPSIG00000011431) PLEK (ENSPSIG00000010697) CNRIP1 (ENSPSIG00000010556) PPP3R1 (ENSPSIG00000010550) PNO1 (ENSPSIG00000010533) DNAAF10 (ENSPSIG00000010344) ##22 C1D (ENSPSIG00000010015) ENSPSIG00000001231 ENSPSIG00000009822 ENSPSIG00000001224 MEIS1 (ENSPSIG00000009187) SPRED2 (ENSPSIG00000008800) ACTR2 (ENSPSIG00000008124) RAB1A (ENSPSIG00000008028) CEP68 (ENSPSIG00000007957) SLC1A4 (ENSPSIG00000017947) SERTAD2 (ENSPSIG00000017893) AFTPH (ENSPSIG00000017890) LGALSL (ENSPSIG00000017748) ENSPSIG00000017632 PELI1 (ENSPSIG00000017442) Testudinoidea ANCESTRAL SPECIES ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Testudinidae ANCESTRAL SPECIES 6 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a.d ENSGT00390000001858 ENSGT00940000154186.a.c ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Goode s thornscrub tortoise MODERN SPECIES 17 ENSGEVG00005003515 XPO1 (ENSGEVG00005003539) FAM161A (ENSGEVG00005003560) CCT4 (ENSGEVG00005003573) SNRPB2 (ENSGEVG00005003591) OTOR (ENSGEVG00005003604) PCSK2 (ENSGEVG00005003616) BFSP1 (ENSGEVG00005003651) ENSGEVG00005003685 APLF (ENSGEVG00005003695) FBXO48 (ENSGEVG00005003719) PLEK (ENSGEVG00005003733) CNRIP1 (ENSGEVG00005003746) PPP3R1 (ENSGEVG00005003753) PNO1 (ENSGEVG00005003766) DNAAF10 (ENSGEVG00005003777) ##22 C1D (ENSGEVG00005003784) ENSGEVG00005003795 MEIS1 (ENSGEVG00005003813) SPRED2 (ENSGEVG00005003835) ACTR2 (ENSGEVG00005003844) RAB1A (ENSGEVG00005003898) CEP68 (ENSGEVG00005003967) SLC1A4 (ENSGEVG00005004113) SERTAD2 (ENSGEVG00005004127) ENSGEVG00005004141 ENSGEVG00005004165 ENSGEVG00005004188 LGALSL (ENSGEVG00005004215) PELI1 (ENSGEVG00005004247) VPS54 (ENSGEVG00005004270) Abingdon island giant tortoise MODERN SPECIES 2362 PPP3R1 (ENSCABG00000002502) ENSCABG00000002501 DNAAF10 (ENSCABG00000002500) ##22 C1D (ENSCABG00000002499) ENSCABG00000002496 ENSCABG00000002495 MEIS1 (ENSCABG00000002390) SPRED2 (ENSCABG00000002328) ACTR2 (ENSCABG00000002179) RAB1A (ENSCABG00000002171) ENSCABG00000002170 SLC1A4 (ENSCABG00000002166) ENSCABG00000002163 Emydidae ANCESTRAL SPECIES 41 ENSGT00940000158659 ENSGT00940000153408.B ENSGT00940000157824 ENSGT00550000074956 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00950000183210.d.b ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Three-toed box turtle MODERN SPECIES 62 XPO1 (ENSTMTG00000012677) FAM161A (ENSTMTG00000012663) ENSTMTG00000012654 CCT4 (ENSTMTG00000012621) SNRPB2 (ENSTMTG00000012597) OTOR (ENSTMTG00000012579) PCSK2 (ENSTMTG00000012469) BFSP1 (ENSTMTG00000012375) ENSTMTG00000012352 ENSTMTG00000012328 FBXO48 (ENSTMTG00000012318) PLEK (ENSTMTG00000012307) CNRIP1 (ENSTMTG00000012284) PPP3R1 (ENSTMTG00000012270) PNO1 (ENSTMTG00000012253) DNAAF10 (ENSTMTG00000012232) ##22 C1D (ENSTMTG00000012215) ENSTMTG00000012204 ENSTMTG00000012186 ENSTMTG00000012173 MEIS1 (ENSTMTG00000012126) ENSTMTG00000012102 SPRED2 (ENSTMTG00000012084) ACTR2 (ENSTMTG00000012053) RAB1A (ENSTMTG00000012038) CEP68 (ENSTMTG00000012027) ENSTMTG00000012010 SERTAD2 (ENSTMTG00000012002) ENSTMTG00000011985 AFTPH (ENSTMTG00000011932) LGALSL (ENSTMTG00000011905) painted turtle MODERN SPECIES 860 ENSCPBG00000014505 ENSCPBG00000014464 PLEK (ENSCPBG00000014461) PPP3R1 (ENSCPBG00000014459) PNO1 (ENSCPBG00000014457) DNAAF10 (ENSCPBG00000014454) ##22 C1D (ENSCPBG00000014451) ENSCPBG00000014446 EIF2A (ENSCPBG00000014430) SERP1 (ENSCPBG00000014425) TSC22D2 (ENSCPBG00000014421) PFN2 (ENSCPBG00000014415) ENSCPBG00000014411 ANKUB1 (ENSCPBG00000014406) COMMD2 (ENSCPBG00000014405) WWTR1 (ENSCPBG00000014399) TM4SF4 (ENSCPBG00000014358) Mammalia ANCESTRAL SPECIES 22 ENSGT00390000013444.a.b.a ENSGT00940000161448 ENSGT00390000001607 ENSGT01090000260080.a ENSGT00390000008327 ENSGT00940000154206.b ENSGT00390000014969 ENSGT00440000033970 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Platypus MODERN SPECIES 20 FERMT1 (ENSOANG00000008410) ENSOANG00000008409 ENSOANG00000047722 CRLS1 (ENSOANG00000041110) MCM8 (ENSOANG00000008405) TRMT6 (ENSOANG00000008403) ENSOANG00000050119 GPCPD1 (ENSOANG00000008396) ENSOANG00000008395 ENSOANG00000008393 FBXO48 (ENSOANG00000008392) PLEK (ENSOANG00000050161) CNRIP1 (ENSOANG00000037625) ENSOANG00000008386 PNO1 (ENSOANG00000045797) DNAAF10 (ENSOANG00000008385) ##22 ENSOANG00000012442 MEIS1 (ENSOANG00000012441) SPRED2 (ENSOANG00000046721) ACTR2 (ENSOANG00000039143) RAB1A (ENSOANG00000012438) ENSOANG00000045432 SLC1A4 (ENSOANG00000012436) SERTAD2 (ENSOANG00000012435) AFTPH (ENSOANG00000012433) ENSOANG00000036481 LGALSL (ENSOANG00000012432) PELI1 (ENSOANG00000012431) VPS54 (ENSOANG00000012428) UGP2 (ENSOANG00000012427) MDH1 (ENSOANG00000012426) Theria ANCESTRAL SPECIES 13 ENSGT00390000013444.a.b.a ENSGT00940000161448 ENSGT00390000001607 ENSGT01090000260080.a ENSGT00390000008327 ENSGT00940000154206.b ENSGT00390000014969 ENSGT00440000033970 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Marsupialia ANCESTRAL SPECIES 19 ENSGT00390000013444.a.b.a ENSGT00940000161448 ENSGT00390000001607 ENSGT01090000260080.a ENSGT00390000008327 ENSGT00940000154206.b ENSGT00390000014969 ENSGT00440000033970 ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Opossum MODERN SPECIES CRLS1 (ENSMODG00000003883) MCM8 (ENSMODG00000003865) TRMT6 (ENSMODG00000003784) ENSMODG00000003761 ENSMODG00000003742 GPCPD1 (ENSMODG00000003735) ENSMODG00000003695 ENSMODG00000003679 ENSMODG00000043880 FBXO48 (ENSMODG00000023128) PLEK (ENSMODG00000003654) CNRIP1 (ENSMODG00000042412) PPP3R1 (ENSMODG00000003614) ENSMODG00000003621 PNO1 (ENSMODG00000003567) DNAAF10 (ENSMODG00000003598) ##22 C1D (ENSMODG00000003561) ENSMODG00000003554 MEIS1 (ENSMODG00000003396) SPRED2 (ENSMODG00000003380) ACTR2 (ENSMODG00000003364) ENSMODG00000047741 RAB1A (ENSMODG00000003340) ENSMODG00000003315 SLC1A4 (ENSMODG00000003310) SERTAD2 (ENSMODG00000023126) AFTPH (ENSMODG00000003235) ENSMODG00000047159 ENSMODG00000003226 PELI1 (ENSMODG00000003212) VPS54 (ENSMODG00000003191) Marsupialia_b ANCESTRAL SPECIES 9 ENSGT00390000011296 ENSGT00390000008255 ENSGT00940000155968 ENSGT00940000156575 ENSGT00940000156185 ENSGT01030000234517.D ENSGT00940000153916.B ENSGT00940000154459.B ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Diprotodontia ANCESTRAL SPECIES 2 ENSGT00390000011296 ENSGT00390000008255 ENSGT00940000155968 ENSGT00940000156575 ENSGT00940000156185 ENSGT01030000234517.D ENSGT00940000153916.B ENSGT00940000154459.B ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Diprotodontia_a ANCESTRAL SPECIES 2 ENSGT00390000011296 ENSGT00390000008255 ENSGT00940000155968 ENSGT00940000156575 ENSGT00940000156185 ENSGT01030000234517.D ENSGT00940000153916.B ENSGT00940000154459.B ENSGT00940000154544 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Common wonbat MODERN SPECIES 1017 NFU1 (ENSVURG00010012093) AAK1 (ENSVURG00010012128) ANXA4 (ENSVURG00010012194) ENSVURG00010012217 ROCK2 (ENSVURG00010012530) SLC66A3 (ENSVURG00010012545) ENSVURG00010012551 C2orf50 (ENSVURG00010012553) ENSVURG00010012564 ENSVURG00010012569 FBXO48 (ENSVURG00010012574) PLEK (ENSVURG00010012588) CNRIP1 (ENSVURG00010012599) PPP3R1 (ENSVURG00010012603) PNO1 (ENSVURG00010012614) DNAAF10 (ENSVURG00010012624) ##22 C1D (ENSVURG00010012637) ENSVURG00010012656 ENSVURG00010012665 MEIS1 (ENSVURG00010012689) SPRED2 (ENSVURG00010012998) ACTR2 (ENSVURG00010013014) RAB1A (ENSVURG00010013043) ENSVURG00010013094 SLC1A4 (ENSVURG00010013104) SERTAD2 (ENSVURG00010013124) AFTPH (ENSVURG00010013132) ENSVURG00010013145 LGALSL (ENSVURG00010013162) PELI1 (ENSVURG00010013173) VPS54 (ENSVURG00010013192) koala MODERN SPECIES 20 GFPT1 (ENSPCIG00000026063) NFU1 (ENSPCIG00000026062) ENSPCIG00000019047 ENSPCIG00000019051 ENSPCIG00000018587 ROCK2 (ENSPCIG00000018605) SLC66A3 (ENSPCIG00000018608) C2orf50 (ENSPCIG00000018610) ENSPCIG00000018616 ENSPCIG00000018618 FBXO48 (ENSPCIG00000018620) PLEK (ENSPCIG00000018623) CNRIP1 (ENSPCIG00000037069) PPP3R1 (ENSPCIG00000018625) PNO1 (ENSPCIG00000018626) DNAAF10 (ENSPCIG00000018627) ##22 ENSPCIG00000018629 ENSPCIG00000016961 MEIS1 (ENSPCIG00000006632) SPRED2 (ENSPCIG00000035990) ACTR2 (ENSPCIG00000023217) RAB1A (ENSPCIG00000023212) ENSPCIG00000023208 SLC1A4 (ENSPCIG00000023205) SERTAD2 (ENSPCIG00000025805) AFTPH (ENSPCIG00000025802) ENSPCIG00000025803 LGALSL (ENSPCIG00000020092) PELI1 (ENSPCIG00000022340) VPS54 (ENSPCIG00000022325) UGP2 (ENSPCIG00000022314) Wallaby MODERN SPECIES 143 PNO1 (ENSMEUG00000004504) DNAAF10 (ENSMEUG00000004489) ##22 Tasmanian devil MODERN SPECIES 1 NFU1 (ENSSHAG00000001163) AAK1 (ENSSHAG00000015125) ANXA4 (ENSSHAG00000014539) ENSSHAG00000014427 ENSSHAG00000023828 ENSSHAG00000012229 ENSSHAG00000027990 ENSSHAG00000026511 ENSSHAG00000029265 ENSSHAG00000002327 PLEK (ENSSHAG00000001830) FBXO48 (ENSSHAG00000004078) CNRIP1 (ENSSHAG00000030089) PPP3R1 (ENSSHAG00000006122) PNO1 (ENSSHAG00000007326) DNAAF10 (ENSSHAG00000007449) ##22 C1D (ENSSHAG00000020536) ENSSHAG00000012254 ENSSHAG00000013030 MEIS1 (ENSSHAG00000016546) SPRED2 (ENSSHAG00000030799) ACTR2 (ENSSHAG00000000220) RAB1A (ENSSHAG00000027574) ENSSHAG00000004687 SLC1A4 (ENSSHAG00000029893) SERTAD2 (ENSSHAG00000022880) ENSSHAG00000028826 AFTPH (ENSSHAG00000010633) LGALSL (ENSSHAG00000026611) PELI1 (ENSSHAG00000024330) VPS54 (ENSSHAG00000000961) Eutheria ANCESTRAL SPECIES 2 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Boreoeutheria ANCESTRAL SPECIES 15 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Laurasiatheria ANCESTRAL SPECIES 13 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000153876.B ENSGT00390000003682 ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000154556 ENSGT00940000155078.a.b.a.b ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a Laurasiatheria_a ANCESTRAL SPECIES 17 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Artiodactyla ANCESTRAL SPECIES 16 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147214 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Suina ANCESTRAL SPECIES 13 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Chacoan peccary MODERN SPECIES 777 NFU1 (ENSCWAG00000017921) GFPT1 (ENSCWAG00000017830) ANTXR1 (ENSCWAG00000017786) GKN1 (ENSCWAG00000017744) GKN2 (ENSCWAG00000017675) ENSCWAG00000017631 BMP10 (ENSCWAG00000017602) ARHGAP25 (ENSCWAG00000017415) PROKR1 (ENSCWAG00000017385) APLF (ENSCWAG00000017353) FBXO48 (ENSCWAG00000017325) PLEK (ENSCWAG00000017263) CNRIP1 (ENSCWAG00000017220) PPP3R1 (ENSCWAG00000017182) PNO1 (ENSCWAG00000017164) DNAAF10 (ENSCWAG00000017128) ##22 C1D (ENSCWAG00000017088) ETAA1 (ENSCWAG00000017059) MEIS1 (ENSCWAG00000016382) SPRED2 (ENSCWAG00000016216) ENSCWAG00000016192 ACTR2 (ENSCWAG00000016124) ENSCWAG00000016093 RAB1A (ENSCWAG00000016000) CEP68 (ENSCWAG00000015895) SLC1A4 (ENSCWAG00000015836) SERTAD2 (ENSCWAG00000015818) AFTPH (ENSCWAG00000015787) LGALSL (ENSCWAG00000015689) PELI1 (ENSCWAG00000015638) VPS54 (ENSCWAG00000015086) Pig MODERN SPECIES 11 NFU1 (ENSSSCG00000025007) GFPT1 (ENSSSCG00000008339) ANTXR1 (ENSSSCG00000008340) GKN1 (ENSSSCG00000035529) GKN2 (ENSSSCG00000038802) GKN3 (ENSSSCG00000037028) BMP10 (ENSSSCG00000032071) ARHGAP25 (ENSSSCG00000008344) PROKR1 (ENSSSCG00000038148) APLF (ENSSSCG00000008346) FBXO48 (ENSSSCG00000008347) PLEK (ENSSSCG00000008348) CNRIP1 (ENSSSCG00000008349) PPP3R1 (ENSSSCG00000036115) PNO1 (ENSSSCG00000008352) DNAAF10 (ENSSSCG00000008353) ##22 C1D (ENSSSCG00000039331) ETAA1 (ENSSSCG00000023908) MEIS1 (ENSSSCG00000039161) ENSSSCG00000044348 SPRED2 (ENSSSCG00000008357) ACTR2 (ENSSSCG00000008358) RAB1A (ENSSSCG00000008359) CEP68 (ENSSSCG00000008360) SLC1A4 (ENSSSCG00000028282) SERTAD2 (ENSSSCG00000037002) AFTPH (ENSSSCG00000008363) LGALSL (ENSSSCG00000030005) PELI1 (ENSSSCG00000028947) VPS54 (ENSSSCG00000027509) UGP2 (ENSSSCG00000008368) Artiodactyla_a ANCESTRAL SPECIES 15 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147214 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Camelidae ANCESTRAL SPECIES 12 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Alpaca MODERN SPECIES 903 PPP3R1 (ENSVPAG00000015522) PNO1 (ENSVPAG00000012083) DNAAF10 (ENSVPAG00000012082) ##22 C1D (ENSVPAG00000012080) ETAA1 (ENSVPAG00000012078) Arabian camel MODERN SPECIES 6 NFU1 (ENSCDRG00005008792) GFPT1 (ENSCDRG00005008607) ANTXR1 (ENSCDRG00005008451) GKN1 (ENSCDRG00005008384) GKN2 (ENSCDRG00005008314) ENSCDRG00005008263 BMP10 (ENSCDRG00005008228) ARHGAP25 (ENSCDRG00005008103) PROKR1 (ENSCDRG00005008059) APLF (ENSCDRG00005007995) FBXO48 (ENSCDRG00005007956) PLEK (ENSCDRG00005007914) CNRIP1 (ENSCDRG00005007885) PPP3R1 (ENSCDRG00005007714) PNO1 (ENSCDRG00005007641) DNAAF10 (ENSCDRG00005007600) ##22 C1D (ENSCDRG00005007559) ETAA1 (ENSCDRG00005007526) ENSCDRG00005007509 MEIS1 (ENSCDRG00005006803) SPRED2 (ENSCDRG00005006696) ACTR2 (ENSCDRG00005006571) RAB1A (ENSCDRG00005006403) CEP68 (ENSCDRG00005006344) SLC1A4 (ENSCDRG00005006273) AFTPH (ENSCDRG00005006174) LGALSL (ENSCDRG00005006106) PELI1 (ENSCDRG00005006069) VPS54 (ENSCDRG00005005842) UGP2 (ENSCDRG00005005735) MDH1 (ENSCDRG00005005489) Artiodactyla_b ANCESTRAL SPECIES 14 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00390000003682.gb.b ENSGT00940000156841 ENSGT00910000147214 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Cetacea ANCESTRAL SPECIES 16 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B.i ENSGT00530000063410.a Blue whale MODERN SPECIES 4 ENSBMSG00010016672 GFPT1 (ENSBMSG00010013920) ANTXR1 (ENSBMSG00010014106) GKN1 (ENSBMSG00010014173) GKN2 (ENSBMSG00010014230) ENSBMSG00010014270 BMP10 (ENSBMSG00010014307) ARHGAP25 (ENSBMSG00010014354) PROKR1 (ENSBMSG00010014509) APLF (ENSBMSG00010014533) FBXO48 (ENSBMSG00010014557) PLEK (ENSBMSG00010014580) CNRIP1 (ENSBMSG00010014640) PPP3R1 (ENSBMSG00010014702) PNO1 (ENSBMSG00010014773) DNAAF10 (ENSBMSG00010014807) ##22 C1D (ENSBMSG00010014843) ETAA1 (ENSBMSG00010014898) MEIS1 (ENSBMSG00010014951) SPRED2 (ENSBMSG00010015313) ENSBMSG00010015420 ACTR2 (ENSBMSG00010015452) RAB1A (ENSBMSG00010015536) CEP68 (ENSBMSG00010015630) ENSBMSG00010015739 SERTAD2 (ENSBMSG00010015761) AFTPH (ENSBMSG00010015789) ENSBMSG00010015828 LGALSL (ENSBMSG00010015854) PELI1 (ENSBMSG00010015886) VPS54 (ENSBMSG00010015929) Odontoceti ANCESTRAL SPECIES 15 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00390000003682.gb.a.a.b ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B.i Odontoceti_a ANCESTRAL SPECIES 12 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00390000003682.gb.a.a.b ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B.i Odontoceti_b ANCESTRAL SPECIES 15 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00390000003682.gb.a.a.b.b ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B.i Monodontidae ANCESTRAL SPECIES 13 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00390000003682.gb.a.a.b.b ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B.i Narwhal MODERN SPECIES 305 NFU1 (ENSMMNG00015014943) GFPT1 (ENSMMNG00015014974) ANTXR1 (ENSMMNG00015015005) GKN1 (ENSMMNG00015015029) GKN2 (ENSMMNG00015015048) ENSMMNG00015015070 BMP10 (ENSMMNG00015015084) ARHGAP25 (ENSMMNG00015015108) PROKR1 (ENSMMNG00015015283) APLF (ENSMMNG00015015298) FBXO48 (ENSMMNG00015015325) PLEK (ENSMMNG00015015351) CNRIP1 (ENSMMNG00015015380) PPP3R1 (ENSMMNG00015015405) PNO1 (ENSMMNG00015015433) DNAAF10 (ENSMMNG00015015443) ##22 C1D (ENSMMNG00015015470) ETAA1 (ENSMMNG00015015495) MEIS1 (ENSMMNG00015015523) ENSMMNG00015015655 SPRED2 (ENSMMNG00015015689) ACTR2 (ENSMMNG00015015753) RAB1A (ENSMMNG00015015848) CEP68 (ENSMMNG00015015909) SLC1A4 (ENSMMNG00015015960) SERTAD2 (ENSMMNG00015016005) AFTPH (ENSMMNG00015016029) LGALSL (ENSMMNG00015016100) PELI1 (ENSMMNG00015016144) VPS54 (ENSMMNG00015016195) ENSMMNG00015009005 Beluga whale MODERN SPECIES 42 GFPT1 (ENSDLEG00000005570) ANTXR1 (ENSDLEG00000005620) GKN1 (ENSDLEG00000005657) GKN2 (ENSDLEG00000005673) ENSDLEG00000005689 BMP10 (ENSDLEG00000005697) ENSDLEG00000005710 ARHGAP25 (ENSDLEG00000005744) PROKR1 (ENSDLEG00000005769) APLF (ENSDLEG00000005776) FBXO48 (ENSDLEG00000005798) PLEK (ENSDLEG00000005814) CNRIP1 (ENSDLEG00000005826) PPP3R1 (ENSDLEG00000005831) PNO1 (ENSDLEG00000005835) WDR92 (ENSDLEG00000005842) ##22 C1D (ENSDLEG00000013334) ETAA1 (ENSDLEG00000013344) MEIS1 (ENSDLEG00000013356) SPRED2 (ENSDLEG00000013406) ACTR2 (ENSDLEG00000013424) RAB1A (ENSDLEG00000013451) CEP68 (ENSDLEG00000013462) SLC1A4 (ENSDLEG00000013482) SERTAD2 (ENSDLEG00000013497) AFTPH (ENSDLEG00000013504) LGALSL (ENSDLEG00000013531) PELI1 (ENSDLEG00000013564) VPS54 (ENSDLEG00000013588) ENSDLEG00000013630 UGP2 (ENSDLEG00000013637) Vaquita MODERN SPECIES 4 NFU1 (ENSPSNG00000019121) GFPT1 (ENSPSNG00000019034) ANTXR1 (ENSPSNG00000018795) GKN1 (ENSPSNG00000018548) GKN2 (ENSPSNG00000018430) ENSPSNG00000018367 BMP10 (ENSPSNG00000018330) ARHGAP25 (ENSPSNG00000018111) PROKR1 (ENSPSNG00000018062) APLF (ENSPSNG00000018014) FBXO48 (ENSPSNG00000017972) PLEK (ENSPSNG00000017885) CNRIP1 (ENSPSNG00000017800) PPP3R1 (ENSPSNG00000017608) PNO1 (ENSPSNG00000017552) DNAAF10 (ENSPSNG00000017470) ##22 C1D (ENSPSNG00000017424) ETAA1 (ENSPSNG00000017386) MEIS1 (ENSPSNG00000017177) ENSPSNG00000017076 SPRED2 (ENSPSNG00000016931) ACTR2 (ENSPSNG00000016825) RAB1A (ENSPSNG00000016689) CEP68 (ENSPSNG00000016545) SLC1A4 (ENSPSNG00000016415) SERTAD2 (ENSPSNG00000016327) AFTPH (ENSPSNG00000016250) LGALSL (ENSPSNG00000016184) PELI1 (ENSPSNG00000016122) VPS54 (ENSPSNG00000015574) ENSPSNG00000015479 Dolphin MODERN SPECIES 6733 PPP3R1 (ENSTTRG00000021395) PNO1 (ENSTTRG00000014002) DNAAF10 (ENSTTRG00000013991) ##22 C1D (ENSTTRG00000013982) Sperm whale DUPLICATION Sperm whale MODERN SPECIES ENSPCTG00005000002 ENSPCTG00005000003 ENSPCTG00005000004 ENSPCTG00005000005 ENSPCTG00005000006 ENSPCTG00005000007 ENSPCTG00005000008 ENSPCTG00005000009 ENSPCTG00005000010 ENSPCTG00005000011 ENSPCTG00005000012 ##22 ENSPCTG00005000013 ENSPCTG00005000014 ENSPCTG00005000015 ENSPCTG00005000016 ENSPCTG00005000017 ENSPCTG00005000018 ENSPCTG00005000019 ENSPCTG00005000020 ENSPCTG00005000021 ENSPCTG00005000022 ENSPCTG00005000023 ENSPCTG00005000024 ENSPCTG00005000025 ENSPCTG00005000026 ENSPCTG00005000027 Sperm whale MODERN SPECIES 3 NFU1 (ENSPCTG00005009942) GFPT1 (ENSPCTG00005009639) ANTXR1 (ENSPCTG00005009423) GKN1 (ENSPCTG00005009330) GKN2 (ENSPCTG00005009224) BMP10 (ENSPCTG00005009185) ARHGAP25 (ENSPCTG00005009007) PROKR1 (ENSPCTG00005008946) ENSPCTG00005008914 APLF (ENSPCTG00005008883) FBXO48 (ENSPCTG00005008864) PLEK (ENSPCTG00005008806) CNRIP1 (ENSPCTG00005008746) PPP3R1 (ENSPCTG00005008639) PNO1 (ENSPCTG00005008568) WDR92 (ENSPCTG00005008494) ##22 ENSPCTG00005008480 C1D (ENSPCTG00005008403) ETAA1 (ENSPCTG00005008337) MEIS1 (ENSPCTG00005008167) ENSPCTG00005008130 ENSPCTG00005008120 SPRED2 (ENSPCTG00005008031) ACTR2 (ENSPCTG00005007920) RAB1A (ENSPCTG00005007858) CEP68 (ENSPCTG00005007824) ENSPCTG00005007798 SERTAD2 (ENSPCTG00005007784) AFTPH (ENSPCTG00005007713) LGALSL (ENSPCTG00005007670) ENSPCTG00005007660 Pecora ANCESTRAL SPECIES 5 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147214 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 2 AAK1 (ENSCHYG00000011231) NFU1 (ENSCHYG00000011141) GFPT1 (ENSCHYG00000010734) ANTXR1 (ENSCHYG00000010456) GKN1 (ENSCHYG00000010366) GKN2 (ENSCHYG00000010314) ENSCHYG00000010229 BMP10 (ENSCHYG00000010198) ARHGAP25 (ENSCHYG00000009972) PROKR1 (ENSCHYG00000009894) ENSCHYG00000009477 FBXO48 (ENSCHYG00000009420) PLEK (ENSCHYG00000009350) CNRIP1 (ENSCHYG00000009217) PNO1 (ENSCHYG00000009166) ENSCHYG00000008783 ##22 C1D (ENSCHYG00000008709) ETAA1 (ENSCHYG00000008673) MEIS1 (ENSCHYG00000008476) ENSCHYG00000008453 SPRED2 (ENSCHYG00000008346) ACTR2 (ENSCHYG00000008112) RAB1A (ENSCHYG00000007988) CEP68 (ENSCHYG00000007916) SLC1A4 (ENSCHYG00000007819) ENSCHYG00000007790 SERTAD2 (ENSCHYG00000007769) ENSCHYG00000007734 AFTPH (ENSCHYG00000007630) LGALSL (ENSCHYG00000007576) ENSCHYG00000007544 Yarkand deer MODERN SPECIES 2 ENSCHYG00000015910 ENSCHYG00000016086 ENSCHYG00000016287 ENSCHYG00000016322 ENSCHYG00000016350 ENSCHYG00000016401 ENSCHYG00000016490 TUBB4B (ENSCHYG00000016588) ENSCHYG00000016744 ENSCHYG00000016865 ENSCHYG00000016909 ENSCHYG00000016970 ENSCHYG00000018903 ENSCHYG00000019007 ENSCHYG00000019109 ENSCHYG00000019336 ##22 ENSCHYG00000019369 ENSCHYG00000019549 ENSCHYG00000019619 ENSCHYG00000019701 ENSCHYG00000019872 ENSCHYG00000019947 ENSCHYG00000020041 ENSCHYG00000020088 ENSCHYG00000020201 ENSCHYG00000020519 ENSCHYG00000020665 ENSCHYG00000020912 ENSCHYG00000021520 ENSCHYG00000021565 ENSCHYG00000006293 Percora_a ANCESTRAL SPECIES 13 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147214 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Siberian musk deer MODERN SPECIES 240 GFPT1 (ENSMMSG00000010848) ANTXR1 (ENSMMSG00000010913) GKN1 (ENSMMSG00000010979) GKN2 (ENSMMSG00000011009) ENSMMSG00000011056 BMP10 (ENSMMSG00000011075) ARHGAP25 (ENSMMSG00000011100) PROKR1 (ENSMMSG00000011183) APLF (ENSMMSG00000011197) FBXO48 (ENSMMSG00000011229) PLEK (ENSMMSG00000011254) CNRIP1 (ENSMMSG00000011305) ENSMMSG00000011356 ENSMMSG00000011434 PNO1 (ENSMMSG00000011455) DNAAF10 (ENSMMSG00000011471) ##22 C1D (ENSMMSG00000011514) ENSMMSG00000006279 ENSMMSG00000006311 ETAA1 (ENSMMSG00000006322) MEIS1 (ENSMMSG00000006369) SPRED2 (ENSMMSG00000006652) ACTR2 (ENSMMSG00000006727) ENSMMSG00000006773 RAB1A (ENSMMSG00000006809) CEP68 (ENSMMSG00000006928) SLC1A4 (ENSMMSG00000007010) ENSMMSG00000007124 SERTAD2 (ENSMMSG00000007146) AFTPH (ENSMMSG00000007162) LGALSL (ENSMMSG00000007219) Bovidae ANCESTRAL SPECIES 5 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147214 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Caprinae ANCESTRAL SPECIES 9 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147214 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00940000154186.a ENSGT00940000155337.h ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a.i Goat MODERN SPECIES 2 ENSCHIG00000020963 GFPT1 (ENSCHIG00000021854) ANTXR1 (ENSCHIG00000023428) GKN1 (ENSCHIG00000021005) GKN2 (ENSCHIG00000018418) ENSCHIG00000002541 BMP10 (ENSCHIG00000026064) ARHGAP25 (ENSCHIG00000025694) PROKR1 (ENSCHIG00000015056) APLF (ENSCHIG00000015145) FBXO48 (ENSCHIG00000018110) PLEK (ENSCHIG00000017674) CNRIP1 (ENSCHIG00000017116) PPP3R1 (ENSCHIG00000004688) PNO1 (ENSCHIG00000012839) DNAAF10 (ENSCHIG00000022762) ##22 C1D (ENSCHIG00000025729) ETAA1 (ENSCHIG00000027011) MEIS1 (ENSCHIG00000027207) SPRED2 (ENSCHIG00000013086) ENSCHIG00000027162 ACTR2 (ENSCHIG00000014272) RAB1A (ENSCHIG00000014060) CEP68 (ENSCHIG00000025433) SLC1A4 (ENSCHIG00000025336) ENSCHIG00000007620 AFTPH (ENSCHIG00000009404) LGALSL (ENSCHIG00000026638) PELI1 (ENSCHIG00000022027) ENSCHIG00000003100 VPS54 (ENSCHIG00000010990) Rambouillet Sheep MODERN SPECIES 19 NFU1 (ENSOARG00020006440) GFPT1 (ENSOARG00020006596) ANTXR1 (ENSOARG00020006876) GKN1 (ENSOARG00020006983) GKN2 (ENSOARG00020007101) ENSOARG00020007185 BMP10 (ENSOARG00020007232) ARHGAP25 (ENSOARG00020007287) APLF (ENSOARG00020007769) PROKR1 (ENSOARG00020007957) FBXO48 (ENSOARG00020007981) PLEK (ENSOARG00020000213) CNRIP1 (ENSOARG00020000300) PPP3R1 (ENSOARG00020000338) PNO1 (ENSOARG00020000405) DNAAF10 (ENSOARG00020000424) ##22 C1D (ENSOARG00020000448) ETAA1 (ENSOARG00020000471) MEIS1 (ENSOARG00020000528) ENSOARG00020000610 SPRED2 (ENSOARG00020000634) ACTR2 (ENSOARG00020000701) ENSOARG00020000747 RAB1A (ENSOARG00020000781) SLC1A4 (ENSOARG00020000870) ENSOARG00020000886 SERTAD2 (ENSOARG00020000894) LGALSL (ENSOARG00020000922) PELI1 (ENSOARG00020000937) ENSOARG00020000952 VPS54 (ENSOARG00020000984) Bovinae ANCESTRAL SPECIES 4 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a American bison MODERN SPECIES 3132 NFU1 (ENSBBBG00000016753) GFPT1 (ENSBBBG00000016730) ANTXR1 (ENSBBBG00000007995) GKN1 (ENSBBBG00000004096) GKN2 (ENSBBBG00000016594) ENSBBBG00000000743 BMP10 (ENSBBBG00000000758) ARHGAP25 (ENSBBBG00000016580) PROKR1 (ENSBBBG00000008335) APLF (ENSBBBG00000016534) FBXO48 (ENSBBBG00000016515) PLEK (ENSBBBG00000016507) CNRIP1 (ENSBBBG00000016489) PPP3R1 (ENSBBBG00000004071) PNO1 (ENSBBBG00000016461) DNAAF10 (ENSBBBG00000016449) ##22 C1D (ENSBBBG00000004066) ENSBBBG00000016408 SIDT1 (ENSBBBG00000004058) USF3 (ENSBBBG00000016318) NAA50 (ENSBBBG00000016293) ATP6V1A (ENSBBBG00000016246) GRAMD1C (ENSBBBG00000016223) ZDHHC23 (ENSBBBG00000007081) CCDC191 (ENSBBBG00000004018) QTRT2 (ENSBBBG00000004001) DRD3 (ENSBBBG00000016079) TIGIT (ENSBBBG00000008552) ZBTB20 (ENSBBBG00000016026) GAP43 (ENSBBBG00000003984) ENSBBBG00000016008 Bos ANCESTRAL SPECIES 5 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556.ib ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Bos_a ANCESTRAL SPECIES 6 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556.ib ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Wild yak MODERN SPECIES 577 DNAAF10 (ENSBMUG00000020199) ##22 C1D (ENSBMUG00000020190) ETAA1 (ENSBMUG00000020179) MEIS1 (ENSBMUG00000020154) SPRED2 (ENSBMUG00000020108) ENSBMUG00000020074 RAB1A (ENSBMUG00000020049) CEP68 (ENSBMUG00000020034) SLC1A4 (ENSBMUG00000019988) Domestic yak MODERN SPECIES 28 AAK1 (ENSBGRG00000004732) NFU1 (ENSBGRG00000004641) GFPT1 (ENSBGRG00000004514) ANTXR1 (ENSBGRG00000004323) GKN1 (ENSBGRG00000004227) GKN2 (ENSBGRG00000004175) ENSBGRG00000004101 BMP10 (ENSBGRG00000004060) ARHGAP25 (ENSBGRG00000003917) PROKR1 (ENSBGRG00000003888) APLF (ENSBGRG00000003735) FBXO48 (ENSBGRG00000003679) PLEK (ENSBGRG00000003648) CNRIP1 (ENSBGRG00000003591) PNO1 (ENSBGRG00000003558) DNAAF10 (ENSBGRG00000013337) ##22 C1D (ENSBGRG00000013288) ENSBGRG00000013266 ETAA1 (ENSBGRG00000013146) ENSBGRG00000013128 MEIS1 (ENSBGRG00000012913) SPRED2 (ENSBGRG00000012585) ACTR2 (ENSBGRG00000012280) RAB1A (ENSBGRG00000012081) CEP68 (ENSBGRG00000011823) SLC1A4 (ENSBGRG00000011713) SERTAD2 (ENSBGRG00000011678) AFTPH (ENSBGRG00000011500) ENSBGRG00000011374 PELI1 (ENSBGRG00000011236) VPS54 (ENSBGRG00000010687) Bos_b ANCESTRAL SPECIES 16 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556.ib ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Hybrid Bos Indicus MODERN SPECIES 2 ANTXR1 (ENSBIXG00005008192) GKN1 (ENSBIXG00005008210) GKN2 (ENSBIXG00005008219) ENSBIXG00005008228 BMP10 (ENSBIXG00005008241) ENSBIXG00005008244 ARHGAP25 (ENSBIXG00005008280) PROKR1 (ENSBIXG00005008293) ENSBIXG00005008303 APLF (ENSBIXG00005008315) FBXO48 (ENSBIXG00005008327) PLEK (ENSBIXG00005008346) ENSBIXG00005008358 ENSBIXG00005000174 PNO1 (ENSBIXG00005000175) DNAAF10 (ENSBIXG00005008434) ##22 C1D (ENSBIXG00005000197) ETAA1 (ENSBIXG00005008485) MEIS1 (ENSBIXG00005000216) SPRED2 (ENSBIXG00005000234) ACTR2 (ENSBIXG00005008678) CEP68 (ENSBIXG00005006085) SLC1A4 (ENSBIXG00005008778) ENSBIXG00005008797 RAB1A (ENSBIXG00005000282) SERTAD2 (ENSBIXG00005008870) AFTPH (ENSBIXG00005008912) ENSBIXG00005008944 PELI1 (ENSBIXG00005008978) VPS54 (ENSBIXG00005009062) UGP2 (ENSBIXG00005009159) Cow MODERN SPECIES 2 NFU1 (ENSBTAG00000000141) GFPT1 (ENSBTAG00000017626) ANTXR1 (ENSBTAG00000007808) GKN1 (ENSBTAG00000012949) GKN2 (ENSBTAG00000017199) ENSBTAG00000038835 BMP10 (ENSBTAG00000000992) ARHGAP25 (ENSBTAG00000023976) PROKR1 (ENSBTAG00000050333) APLF (ENSBTAG00000018401) FBXO48 (ENSBTAG00000047772) PLEK (ENSBTAG00000009658) CNRIP1 (ENSBTAG00000001408) PPP3R1 (ENSBTAG00000010619) PNO1 (ENSBTAG00000010604) DNAAF10 (ENSBTAG00000010595) ##22 C1D (ENSBTAG00000049002) ETAA1 (ENSBTAG00000011727) MEIS1 (ENSBTAG00000008448) SPRED2 (ENSBTAG00000019456) ACTR2 (ENSBTAG00000009761) RAB1A (ENSBTAG00000016720) CEP68 (ENSBTAG00000016717) SLC1A4 (ENSBTAG00000007763) ENSBTAG00000050435 SERTAD2 (ENSBTAG00000049341) AFTPH (ENSBTAG00000009299) LGALSL (ENSBTAG00000055296) ENSBTAG00000053585 PELI1 (ENSBTAG00000020865) VPS54 (ENSBTAG00000000115) Laurasiatheria_b ANCESTRAL SPECIES 17 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Laurasiatheria_c ANCESTRAL SPECIES 14 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Equus ANCESTRAL SPECIES 7 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Donkey MODERN SPECIES 26 NFU1 (ENSEASG00005007351) GFPT1 (ENSEASG00005007343) ANTXR1 (ENSEASG00005007337) GKN1 (ENSEASG00005007330) GKN2 (ENSEASG00005007325) ENSEASG00005007322 BMP10 (ENSEASG00005036298) ARHGAP25 (ENSEASG00005007316) PROKR1 (ENSEASG00005028856) APLF (ENSEASG00005007314) FBXO48 (ENSEASG00005007313) PLEK (ENSEASG00005007312) CNRIP1 (ENSEASG00005030124) ENSEASG00005007310 PNO1 (ENSEASG00005007309) DNAAF10 (ENSEASG00005007308) ##22 C1D (ENSEASG00005033257) ETAA1 (ENSEASG00005007305) MEIS1 (ENSEASG00005007304) SPRED2 (ENSEASG00005027956) ACTR2 (ENSEASG00005007299) RAB1A (ENSEASG00005034669) CEP68 (ENSEASG00005007297) SLC1A4 (ENSEASG00005007296) ENSEASG00005035148 SERTAD2 (ENSEASG00005026993) AFTPH (ENSEASG00005007290) LGALSL (ENSEASG00005007283) PELI1 (ENSEASG00005007279) VPS54 (ENSEASG00005007268) UGP2 (ENSEASG00005007264) Chiroptera ANCESTRAL SPECIES 10 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Megabat MODERN SPECIES 3065 CNRIP1 (ENSPVAG00000012697) PPP3R1 (ENSPVAG00000024205) PNO1 (ENSPVAG00000012695) DNAAF10 (ENSPVAG00000012693) ##22 C1D (ENSPVAG00000012692) Microchiroptera ANCESTRAL SPECIES 14 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Greater horseshoe bat MODERN SPECIES 4 GFPT1 (ENSRFEG00010015688) ANTXR1 (ENSRFEG00010015883) GKN1 (ENSRFEG00010006208) GKN2 (ENSRFEG00010006314) ENSRFEG00010006363 BMP10 (ENSRFEG00010006382) ENSRFEG00010006412 ARHGAP25 (ENSRFEG00010006451) PROKR1 (ENSRFEG00010006533) APLF (ENSRFEG00010006577) FBXO48 (ENSRFEG00010006636) PLEK (ENSRFEG00010006661) CNRIP1 (ENSRFEG00010006735) PPP3R1 (ENSRFEG00010006792) PNO1 (ENSRFEG00010006896) DNAAF10 (ENSRFEG00010006949) ##22 ENSRFEG00010007018 ETAA1 (ENSRFEG00010007107) MEIS1 (ENSRFEG00010007165) ENSRFEG00010007383 SPRED2 (ENSRFEG00010007454) ACTR2 (ENSRFEG00010007536) ENSRFEG00010007617 RAB1A (ENSRFEG00010007659) CEP68 (ENSRFEG00010007746) SLC1A4 (ENSRFEG00010007793) SERTAD2 (ENSRFEG00010007864) AFTPH (ENSRFEG00010007890) LGALSL (ENSRFEG00010007948) PELI1 (ENSRFEG00010008007) VPS54 (ENSRFEG00010008048) Microbat DUPLICATION Microbat MODERN SPECIES 401 ENSMLUG00000029826 ##22 Microbat MODERN SPECIES 1045 AAK1 (ENSMLUG00000009095) ENSMLUG00000009087 NFU1 (ENSMLUG00000009070) GFPT1 (ENSMLUG00000003686) ANTXR1 (ENSMLUG00000003672) GKN1 (ENSMLUG00000003670) GKN2 (ENSMLUG00000003667) ENSMLUG00000029487 BMP10 (ENSMLUG00000003664) ARHGAP25 (ENSMLUG00000003661) PROKR1 (ENSMLUG00000003660) APLF (ENSMLUG00000005287) FBXO48 (ENSMLUG00000016516) PLEK (ENSMLUG00000016505) CNRIP1 (ENSMLUG00000029512) ENSMLUG00000010807 ##22 ENSMLUG00000023760 PNO1 (ENSMLUG00000010850) ENSMLUG00000029561 ENSMLUG00000010802 ENSMLUG00000024867 ENSMLUG00000010791 ETAA1 (ENSMLUG00000011619) ENSMLUG00000005308 MEIS1 (ENSMLUG00000004906) ENSMLUG00000028961 Carnivora ANCESTRAL SPECIES 19 ENSGT00390000008255 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Felidae ANCESTRAL SPECIES 3 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00390000008279.a.g.b ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00940000163647 ENSGT00940000166021 ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405.o.a ENSGT00390000016292.i.a.f ENSGT00390000009597 ENSGT00940000156327 ENSGT00950000183164.E.c.b.b ##12 ENSGT00390000004856.w.a.a.b.b.a.b.b.a ENSGT00940000156841 ENSGT00960000190724 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a Panthera ANCESTRAL SPECIES 2 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00390000008279.a.g.b ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00940000163647 ENSGT00940000166021 ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405.o.a ENSGT00390000016292.i.a.f ENSGT00390000009597 ENSGT00940000156327 ENSGT00950000183164.E.c.b.b ##12 ENSGT00390000004856.w.a.a.b.b.a.b.b.a ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337.f Tiger MODERN SPECIES 184 NFU1 (ENSPTIG00000017605) GFPT1 (ENSPTIG00000012830) ANTXR1 (ENSPTIG00000008417) GKN1 (ENSPTIG00000007559) GKN2 (ENSPTIG00000006248) BMP10 (ENSPTIG00000005877) ARHGAP25 (ENSPTIG00000018750) PROKR1 (ENSPTIG00000018114) APLF (ENSPTIG00000016997) FBXO48 (ENSPTIG00000016831) PLEK (ENSPTIG00000016072) CNRIP1 (ENSPTIG00000015693) ENSPTIG00000015180 PPP3R1 (ENSPTIG00000012344) PNO1 (ENSPTIG00000011738) DNAAF10 (ENSPTIG00000011069) ##22 C1D (ENSPTIG00000009414) Panthera_a ANCESTRAL SPECIES 1 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00390000008279.a.g.b ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00940000163647 ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405.o.a ENSGT00390000016292.i.a.f ENSGT00390000009597 ENSGT00940000156327 ENSGT00950000183164.E.c.b.b ##12 ENSGT00390000004856.w.a.a.b.b.a.b.b.a ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000164277 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a leopard MODERN SPECIES GFPT1 (ENSPPRG00000013257) ANTXR1 (ENSPPRG00000013382) GKN1 (ENSPPRG00000013467) GKN2 (ENSPPRG00000013545) BMP10 (ENSPPRG00000013696) ARHGAP25 (ENSPPRG00000014076) ENSPPRG00000014131 PROKR1 (ENSPPRG00000014304) APLF (ENSPPRG00000014711) FBXO48 (ENSPPRG00000014760) PLEK (ENSPPRG00000014845) CNRIP1 (ENSPPRG00000014986) ENSPPRG00000015005 PPP3R1 (ENSPPRG00000015164) PNO1 (ENSPPRG00000015494) DNAAF10 (ENSPPRG00000015515) ##22 ENSPPRG00000017045 ENSPPRG00000020640 ETAA1 (ENSPPRG00000017171) MEIS1 (ENSPPRG00000018537) ENSPPRG00000020658 ##12 ENSPPRG00000020632 SPRED2 (ENSPPRG00000020675) ACTR2 (ENSPPRG00000020870) ENSPPRG00000021550 RAB1A (ENSPPRG00000025077) CEP68 (ENSPPRG00000025073) SLC1A4 (ENSPPRG00000025070) SERTAD2 (ENSPPRG00000020703) ENSPPRG00000025068 AFTPH (ENSPPRG00000025039) lion MODERN SPECIES 3 ANTXR1 (ENSPLOG00000013000) ENSPLOG00000013289 GKN1 (ENSPLOG00000013345) GKN2 (ENSPLOG00000013504) BMP10 (ENSPLOG00000013596) ARHGAP25 (ENSPLOG00000013647) ENSPLOG00000013777 PROKR1 (ENSPLOG00000013815) APLF (ENSPLOG00000013862) FBXO48 (ENSPLOG00000013995) PLEK (ENSPLOG00000014035) CNRIP1 (ENSPLOG00000014131) PPP3R1 (ENSPLOG00000014231) ENSPLOG00000014345 PNO1 (ENSPLOG00000014368) DNAAF10 (ENSPLOG00000014401) ##22 C1D (ENSPLOG00000014545) ENSPLOG00000014602 ETAA1 (ENSPLOG00000014630) MEIS1 (ENSPLOG00000014760) ENSPLOG00000015010 ##12 SPRED2 (ENSPLOG00000015039) ACTR2 (ENSPLOG00000015113) ENSPLOG00000015344 RAB1A (ENSPLOG00000015420) CEP68 (ENSPLOG00000015547) SLC1A4 (ENSPLOG00000015581) SERTAD2 (ENSPLOG00000000111) AFTPH (ENSPLOG00000000129) LGALSL (ENSPLOG00000000160) PELI1 (ENSPLOG00000000230) Cat MODERN SPECIES 2 NFU1 (ENSFCAG00000027610) GFPT1 (ENSFCAG00000007598) ANTXR1 (ENSFCAG00000007597) GKN1 (ENSFCAG00000007596) GKN2 (ENSFCAG00000031999) ENSFCAG00000038235 ARHGAP25 (ENSFCAG00000007595) ENSFCAG00000028283 PROKR1 (ENSFCAG00000040150) APLF (ENSFCAG00000022636) FBXO48 (ENSFCAG00000033588) PLEK (ENSFCAG00000009426) ENSFCAG00000052333 PPP3R1 (ENSFCAG00000033294) PNO1 (ENSFCAG00000041028) DNAAF10 (ENSFCAG00000027122) ##22 C1D (ENSFCAG00000028933) ENSFCAG00000028962 ETAA1 (ENSFCAG00000026219) MEIS1 (ENSFCAG00000036549) ENSFCAG00000037094 ##12 ENSFCAG00000028286 SPRED2 (ENSFCAG00000004962) ENSFCAG00000051060 ACTR2 (ENSFCAG00000004960) ENSFCAG00000014868 RAB1A (ENSFCAG00000002536) CEP68 (ENSFCAG00000030849) SLC1A4 (ENSFCAG00000001506) SERTAD2 (ENSFCAG00000002492) AFTPH (ENSFCAG00000028719) Caniformia ANCESTRAL SPECIES 18 ENSGT00390000008255 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Caniformia_b ANCESTRAL SPECIES 11 ENSGT00390000008255 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Ursidae ANCESTRAL SPECIES 9 ENSGT00390000008255 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c.x ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Ursus ANCESTRAL SPECIES 20 ENSGT00390000008255 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c.x ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a.p American black bear MODERN SPECIES 4417 PPP3R1 (ENSUAMG00000017278) PNO1 (ENSUAMG00000017274) DNAAF10 (ENSUAMG00000017270) ##22 Polar bear MODERN SPECIES 223 ENSUMAG00000021263 NFU1 (ENSUMAG00000021254) GFPT1 (ENSUMAG00000021249) ANTXR1 (ENSUMAG00000021191) GKN1 (ENSUMAG00000021176) GKN2 (ENSUMAG00000021173) BMP10 (ENSUMAG00000021172) ARHGAP25 (ENSUMAG00000021168) PROKR1 (ENSUMAG00000021155) APLF (ENSUMAG00000021151) FBXO48 (ENSUMAG00000021148) PLEK (ENSUMAG00000021146) CNRIP1 (ENSUMAG00000021144) PPP3R1 (ENSUMAG00000021129) PNO1 (ENSUMAG00000021126) DNAAF10 (ENSUMAG00000021123) ##22 C1D (ENSUMAG00000021118) ETAA1 (ENSUMAG00000021106) MEIS1 (ENSUMAG00000021098) SPRED2 (ENSUMAG00000021053) ACTR2 (ENSUMAG00000021042) ENSUMAG00000021041 RAB1A (ENSUMAG00000021038) CEP68 (ENSUMAG00000021035) SLC1A4 (ENSUMAG00000021032) ENSUMAG00000021019 AFTPH (ENSUMAG00000021014) LGALSL (ENSUMAG00000021007) PELI1 (ENSUMAG00000021002) VPS54 (ENSUMAG00000020982) UGP2 (ENSUMAG00000020975) Giant Panda MODERN SPECIES 14 AAK1 (ENSAMEG00000016190) NFU1 (ENSAMEG00000016216) GFPT1 (ENSAMEG00000016228) ANTXR1 (ENSAMEG00000014069) GKN1 (ENSAMEG00000014101) GKN2 (ENSAMEG00000014107) BMP10 (ENSAMEG00000014110) ARHGAP25 (ENSAMEG00000000374) PROKR1 (ENSAMEG00000027677) APLF (ENSAMEG00000000409) ENSAMEG00000029506 PLEK (ENSAMEG00000004920) CNRIP1 (ENSAMEG00000004912) PPP3R1 (ENSAMEG00000027372) PNO1 (ENSAMEG00000004897) DNAAF10 (ENSAMEG00000004868) ##22 C1D (ENSAMEG00000004859) ETAA1 (ENSAMEG00000015785) MEIS1 (ENSAMEG00000015779) ENSAMEG00000029782 ENSAMEG00000015767 ENSAMEG00000015749 ENSAMEG00000024763 ENSAMEG00000031136 RAB1A (ENSAMEG00000026261) CEP68 (ENSAMEG00000001121) SLC1A4 (ENSAMEG00000001092) SERTAD2 (ENSAMEG00000028964) AFTPH (ENSAMEG00000001080) LGALSL (ENSAMEG00000027975) PELI1 (ENSAMEG00000001167) Mustelinae ANCESTRAL SPECIES 16 ENSGT00940000156575 ENSGT00940000155968 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Ferret MODERN SPECIES 169 ANXA4 (ENSMPUG00000006796) AAK1 (ENSMPUG00000006715) ENSMPUG00000006663 GFPT1 (ENSMPUG00000006393) ANTXR1 (ENSMPUG00000006376) GKN1 (ENSMPUG00000006333) GKN2 (ENSMPUG00000006320) BMP10 (ENSMPUG00000006313) ARHGAP25 (ENSMPUG00000006303) PROKR1 (ENSMPUG00000006297) APLF (ENSMPUG00000006285) PLEK (ENSMPUG00000006274) CNRIP1 (ENSMPUG00000006263) PPP3R1 (ENSMPUG00000006250) ENSMPUG00000006244 DNAAF10 (ENSMPUG00000006235) ##22 C1D (ENSMPUG00000006224) ETAA1 (ENSMPUG00000006214) MEIS1 (ENSMPUG00000006198) SPRED2 (ENSMPUG00000006186) ACTR2 (ENSMPUG00000006176) RAB1A (ENSMPUG00000006139) CEP68 (ENSMPUG00000006108) SLC1A4 (ENSMPUG00000006098) ENSMPUG00000006094 ENSMPUG00000006090 SERTAD2 (ENSMPUG00000018821) AFTPH (ENSMPUG00000006081) LGALSL (ENSMPUG00000006075) ENSMPUG00000006072 PELI1 (ENSMPUG00000006068) American mink MODERN SPECIES 360 GKN1 (ENSNVIG00000018290) GKN2 (ENSNVIG00000018267) BMP10 (ENSNVIG00000018262) RHG25 (ENSNVIG00000018233) PROKR1 (ENSNVIG00000018226) ENSNVIG00000018224 ENSNVIG00000018217 PLEK (ENSNVIG00000018184) CNRP1 (ENSNVIG00000018162) PPP3R1 (ENSNVIG00000018135) ENSNVIG00000018125 DNAAF10 (ENSNVIG00000018094) ##22 C1D (ENSNVIG00000018063) ETAA1 (ENSNVIG00000018016) Canidae ANCESTRAL SPECIES 10 ENSGT00390000008255 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00390000017839.o.a ENSGT00940000156327 ENSGT00950000183164.E.c.b.b ##12 ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Canis_lupus ANCESTRAL SPECIES 9 ENSGT00940000155968 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00950000183010.a.a.a.a.c.b.d.a.a ENSGT00390000009597 ENSGT00390000017839.o.a ENSGT00940000156327 ENSGT00950000183164.E.c.b.b ##12 ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000154556 ENSGT00390000017004.a.a.q.a ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00940000154186.a ENSGT00940000155337 Dog MODERN SPECIES 1 AAK1 (ENSCAFG00845025681) NFU1 (ENSCAFG00845025447) GFPT1 (ENSCAFG00845024744) ANTXR1 (ENSCAFG00845024244) GKN1 (ENSCAFG00845024000) GKN2 (ENSCAFG00845023893) BMP10 (ENSCAFG00845023837) ARHGAP25 (ENSCAFG00845023650) PROKR1 (ENSCAFG00845023574) APLF (ENSCAFG00845023524) FBXO48 (ENSCAFG00845023484) PLEK (ENSCAFG00845023363) CNRIP1 (ENSCAFG00845023282) PPP3R1 (ENSCAFG00845022977) PNO1 (ENSCAFG00845022894) WDR92 (ENSCAFG00845022818) ##22 WDR92 (ENSCAFG00845022766) ENSCAFG00845022735 ETAA1 (ENSCAFG00845022577) ENSCAFG00845022346 MEIS1 (ENSCAFG00845022164) ENSCAFG00845022112 SPRED2 (ENSCAFG00845022023) ACTR2 (ENSCAFG00845021843) ENSCAFG00845021409 ENSCAFG00845021343 RAB1A (ENSCAFG00845021139) CEP68 (ENSCAFG00845021026) SLC1A4 (ENSCAFG00845020925) AFTPH (ENSCAFG00845020600) ENSCAFG00845020543 Dingo MODERN SPECIES 307 AAK1 (ENSCAFG00020000737) NFU1 (ENSCAFG00020000713) GFPT1 (ENSCAFG00020000705) ANTXR1 (ENSCAFG00020000433) GKN1 (ENSCAFG00020000316) GKN2 (ENSCAFG00020000261) BMP10 (ENSCAFG00020000180) ARHGAP25 (ENSCAFG00020000168) PROKR1 (ENSCAFG00020000143) APLF (ENSCAFG00020000129) FBXO48 (ENSCAFG00020000114) PLEK (ENSCAFG00020000109) CNRIP1 (ENSCAFG00020000090) PPP3R1 (ENSCAFG00020027004) PNO1 (ENSCAFG00020027002) DNAAF10 (ENSCAFG00020026999) ##22 C1D (ENSCAFG00020026997) ENSCAFG00020026995 ETAA1 (ENSCAFG00020026994) ENSCAFG00020026992 MEIS1 (ENSCAFG00020026989) ENSCAFG00020026987 ##12 ENSCAFG00020026985 SPRED2 (ENSCAFG00020026983) ENSCAFG00020026981 ACTR2 (ENSCAFG00020026978) ENSCAFG00020026973 RAB1A (ENSCAFG00020026971) CEP68 (ENSCAFG00020026969) SLC1A4 (ENSCAFG00020026962) AFTPH (ENSCAFG00020026953) Red fox MODERN SPECIES 141 ENSVVUG00000027821 NFU1 (ENSVVUG00000027818) GFPT1 (ENSVVUG00000027815) ANTXR1 (ENSVVUG00000027689) GKN1 (ENSVVUG00000027676) GKN2 (ENSVVUG00000027671) BMP10 (ENSVVUG00000027668) ARHGAP25 (ENSVVUG00000027661) PROKR1 (ENSVVUG00000027657) APLF (ENSVVUG00000027649) FBXO48 (ENSVVUG00000027647) PLEK (ENSVVUG00000027643) ENSVVUG00000027638 PPP3R1 (ENSVVUG00000027635) PNO1 (ENSVVUG00000027634) WDR92 (ENSVVUG00000027632) ##22 C1D (ENSVVUG00000027629) ETAA1 (ENSVVUG00000027624) ENSVVUG00000027618 MEIS1 (ENSVVUG00000027610) ENSVVUG00000027601 ##12 SPRED2 (ENSVVUG00000027600) ACTR2 (ENSVVUG00000027598) ENSVVUG00000027596 ENSVVUG00000027593 ENSVVUG00000027592 RAB1A (ENSVVUG00000027588) CEP68 (ENSVVUG00000027585) SLC1A4 (ENSVVUG00000027576) Eulipotyphla ANCESTRAL SPECIES 1923 ENSGT00390000018052 ENSGT00950000183091.A.b ##22 Common shrew MODERN SPECIES 1226 PNO1 (ENSSARG00000009055) ENSSARG00000009021 ##22 Hedgehog MODERN SPECIES 1774 PNO1 (ENSEEUG00000009611) ENSEEUG00000009499 ##22 Euarchontoglires ANCESTRAL SPECIES 15 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Euarchontoglires_A ANCESTRAL SPECIES 14 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00960000190724 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Glires ANCESTRAL SPECIES 13 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00960000190724 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Lagomorpha ANCESTRAL SPECIES 10 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556.lb.a ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Rabbit MODERN SPECIES 11 NFU1 (ENSOCUG00000009541) GFPT1 (ENSOCUG00000029568) ANTXR1 (ENSOCUG00000010232) GKN1 (ENSOCUG00000010230) ENSOCUG00000010225 ENSOCUG00000024440 BMP10 (ENSOCUG00000010221) ARHGAP25 (ENSOCUG00000010212) PROKR1 (ENSOCUG00000026978) APLF (ENSOCUG00000006121) FBXO48 (ENSOCUG00000006116) PLEK (ENSOCUG00000006113) CNRIP1 (ENSOCUG00000006109) PPP3R1 (ENSOCUG00000027562) ENSOCUG00000006100 DNAAF10 (ENSOCUG00000006087) ##22 ENSOCUG00000009771 ETAA1 (ENSOCUG00000001812) MEIS1 (ENSOCUG00000001842) ENSOCUG00000034052 SPRED2 (ENSOCUG00000004913) ACTR2 (ENSOCUG00000004906) RAB1A (ENSOCUG00000017003) CEP68 (ENSOCUG00000016996) ENSOCUG00000010821 SERTAD2 (ENSOCUG00000008192) AFTPH (ENSOCUG00000006390) LGALSL (ENSOCUG00000013957) ENSOCUG00000031191 PELI1 (ENSOCUG00000027961) VPS54 (ENSOCUG00000002143) Pika MODERN SPECIES 4384 APLF (ENSOPRG00000009700) FBXO48 (ENSOPRG00000009690) PLEK (ENSOPRG00000009671) CNRIP1 (ENSOPRG00000009658) PNO1 (ENSOPRG00000009643) ENSOPRG00000009593 ##22 C1D (ENSOPRG00000009586) Rodentia ANCESTRAL SPECIES 15 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00960000190724 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Rodentia_A ANCESTRAL SPECIES 14 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00960000190724 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Hystricomorpha ANCESTRAL SPECIES 8 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A.f ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Hystricomorpha_a ANCESTRAL SPECIES 35 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A.f ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Guinea pig MODERN SPECIES 37 NFU1 (ENSCPOG00000032919) GFPT1 (ENSCPOG00000014259) ANTXR1 (ENSCPOG00000009963) GKN1 (ENSCPOG00000014181) GKN2 (ENSCPOG00000014178) ENSCPOG00000025285 BMP10 (ENSCPOG00000019825) ARHGAP25 (ENSCPOG00000025943) PROKR1 (ENSCPOG00000039175) APLF (ENSCPOG00000003527) FBXO48 (ENSCPOG00000030418) PLEK (ENSCPOG00000003525) CNRIP1 (ENSCPOG00000033555) PPP3R1 (ENSCPOG00000036560) PNO1 (ENSCPOG00000010130) DNAAF10 (ENSCPOG00000010110) ##22 ENSCPOG00000037986 ETAA1 (ENSCPOG00000012749) ENSCPOG00000001035 MEIS1 (ENSCPOG00000008177) Hystricomorpha_b ANCESTRAL SPECIES 33 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958.y ENSGT00810000125473.A.f ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Degu DUPLICATION Degu MODERN SPECIES 119 BMP10 (ENSODEG00000010621) ARHGAP25 (ENSODEG00000012290) PROKR1 (ENSODEG00000011030) FBXO48 (ENSODEG00000011400) PLEK (ENSODEG00000011044) CNRIP1 (ENSODEG00000011175) PPP3R1 (ENSODEG00000012397) PNO1 (ENSODEG00000011769) ENSODEG00000011043 ##22 ENSODEG00000019812 ENSODEG00000011242 MEIS1 (ENSODEG00000012314) ENSODEG00000012312 SPRED2 (ENSODEG00000012243) ENSODEG00000010956 ENSODEG00000011248 SLC1A4 (ENSODEG00000011406) SERTAD2 (ENSODEG00000011523) ENSODEG00000011805 LGALSL (ENSODEG00000011485) ENSODEG00000011901 PELI1 (ENSODEG00000011189) VPS54 (ENSODEG00000012541) ENSODEG00000011552 Degu MODERN SPECIES 169 ATP13A5 (ENSODEG00000000942) PLAAT1 (ENSODEG00000000928) ENSODEG00000000915 FGF12 (ENSODEG00000000898) ENSODEG00000018632 CCDC50 (ENSODEG00000001028) OSTN (ENSODEG00000000984) GMNC (ENSODEG00000000968) ENSODEG00000000947 ##22 IL1RAP (ENSODEG00000000880) TMEM207 (ENSODEG00000000814) CLDN16 (ENSODEG00000000787) CLDN1 (ENSODEG00000000775) P3H2 (ENSODEG00000000751) TP63 (ENSODEG00000000698) TPRG1 (ENSODEG00000000645) LPP (ENSODEG00000000601) BCL6 (ENSODEG00000000516) RTP2 (ENSODEG00000000495) SST (ENSODEG00000000486) ENSODEG00000000479 MASP1 (ENSODEG00000000434) RTP1 (ENSODEG00000000396) ST6GAL1 (ENSODEG00000002040) Long-tailed chinchilla MODERN SPECIES 131 GFPT1 (ENSCLAG00000008896) ANTXR1 (ENSCLAG00000011983) ENSCLAG00000010348 GKN1 (ENSCLAG00000010820) GKN2 (ENSCLAG00000015981) ENSCLAG00000007045 BMP10 (ENSCLAG00000007285) ARHGAP25 (ENSCLAG00000007583) PROKR1 (ENSCLAG00000008825) APLF (ENSCLAG00000009519) FBXO48 (ENSCLAG00000010201) PLEK (ENSCLAG00000010835) CNRIP1 (ENSCLAG00000012035) PPP3R1 (ENSCLAG00000012159) PNO1 (ENSCLAG00000015058) DNAAF10 (ENSCLAG00000014702) ##22 C1D (ENSCLAG00000011883) ETAA1 (ENSCLAG00000013575) MEIS1 (ENSCLAG00000010420) SPRED2 (ENSCLAG00000011449) ACTR2 (ENSCLAG00000010920) RAB1A (ENSCLAG00000014766) CEP68 (ENSCLAG00000012193) SLC1A4 (ENSCLAG00000008207) SERTAD2 (ENSCLAG00000008318) AFTPH (ENSCLAG00000012032) ENSCLAG00000012344 LGALSL (ENSCLAG00000015114) PELI1 (ENSCLAG00000006481) VPS54 (ENSCLAG00000007366) UGP2 (ENSCLAG00000010416) Naked mole-rat female MODERN SPECIES 23 ENSHGLG00000009990 BMP10 (ENSHGLG00000036573) ENSHGLG00000032377 ARHGAP25 (ENSHGLG00000018071) ENSHGLG00000018073 PROKR1 (ENSHGLG00000034888) ENSHGLG00000005135 APLF (ENSHGLG00000042896) FBXO48 (ENSHGLG00000044023) ENSHGLG00000000426 PLEK (ENSHGLG00000019154) CNRIP1 (ENSHGLG00000045252) ENSHGLG00000047583 PPP3R1 (ENSHGLG00000044041) PNO1 (ENSHGLG00000045522) DNAAF10 (ENSHGLG00000012153) ##22 ENSHGLG00000012332 ETAA1 (ENSHGLG00000040625) ENSHGLG00000020742 MEIS1 (ENSHGLG00000012586) ENSHGLG00000013407 ENSHGLG00000041829 ENSHGLG00000034618 ENSHGLG00000042711 ENSHGLG00000037092 RAB1A (ENSHGLG00000045077) CEP68 (ENSHGLG00000018361) ENSHGLG00000048375 SLC1A4 (ENSHGLG00000036619) ENSHGLG00000049432 ENSHGLG00000047996 Sciuridae ANCESTRAL SPECIES 16 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00940000164891 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00960000190724 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Marmotini ANCESTRAL SPECIES 14 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000164891 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000154431.e.a.f ENSGT00940000156841 ENSGT00960000190724 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a Marmotini_b ANCESTRAL SPECIES 44 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000164891 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000154431.e.a.f ENSGT00940000156841 ENSGT00960000190724 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a Arctic ground squirrel MODERN SPECIES 47 ENSUPAG00010010494 GFPT1 (ENSUPAG00010010498) ANTXR1 (ENSUPAG00010010542) GKN1 (ENSUPAG00010010567) GKN2 (ENSUPAG00010010576) ENSUPAG00010010583 BMP10 (ENSUPAG00010010590) ARHGAP25 (ENSUPAG00010010596) ENSUPAG00010010610 APLF (ENSUPAG00010010617) FBXO48 (ENSUPAG00010010632) PLEK (ENSUPAG00010010638) CNRIP1 (ENSUPAG00010010645) PPP3R1 (ENSUPAG00010010653) PNO1 (ENSUPAG00010010658) DNAAF10 (ENSUPAG00010010668) ##22 ENSUPAG00010010674 ETAA1 (ENSUPAG00010010688) ENSUPAG00010010694 ##33 MEIS1 (ENSUPAG00010010695) ENSUPAG00010010713 ENSUPAG00010010722 SPRED2 (ENSUPAG00010010724) ENSUPAG00010010742 ACTR2 (ENSUPAG00010010750) RAB1A (ENSUPAG00010010773) CEP68 (ENSUPAG00010010822) SLC1A4 (ENSUPAG00010010829) ENSUPAG00010010837 SERTAD2 (ENSUPAG00010010839) AFTPH (ENSUPAG00010010843) Squirrel MODERN SPECIES 91 NFU1 (ENSSTOG00000013474) GFPT1 (ENSSTOG00000013461) ANTXR1 (ENSSTOG00000010370) GKN1 (ENSSTOG00000024019) GKN2 (ENSSTOG00000010364) ENSSTOG00000025416 BMP10 (ENSSTOG00000010358) ARHGAP25 (ENSSTOG00000010347) ENSSTOG00000010343 APLF (ENSSTOG00000014677) FBXO48 (ENSSTOG00000014675) PLEK (ENSSTOG00000014667) CNRIP1 (ENSSTOG00000004875) PPP3R1 (ENSSTOG00000025985) PNO1 (ENSSTOG00000026989) DNAAF10 (ENSSTOG00000024192) ##22 C1D (ENSSTOG00000012346) ETAA1 (ENSSTOG00000027144) MEIS1 (ENSSTOG00000009914) ENSSTOG00000024155 SPRED2 (ENSSTOG00000022318) ACTR2 (ENSSTOG00000012608) ENSSTOG00000020693 CEP68 (ENSSTOG00000011479) SLC1A4 (ENSSTOG00000025160) SERTAD2 (ENSSTOG00000008454) ENSSTOG00000030042 AFTPH (ENSSTOG00000020828) LGALSL (ENSSTOG00000024204) PELI1 (ENSSTOG00000026315) VPS54 (ENSSTOG00000023517) Alpin marmot MODERN SPECIES 6 ANTXR1 (ENSMMMG00000005306) GKN1 (ENSMMMG00000005442) GKN2 (ENSMMMG00000005457) ENSMMMG00000005470 BMP10 (ENSMMMG00000005486) ENSMMMG00000005514 ARHGAP25 (ENSMMMG00000005520) ENSMMMG00000005553 APLF (ENSMMMG00000005578) FBXO48 (ENSMMMG00000005580) PLEK (ENSMMMG00000005592) CNRIP1 (ENSMMMG00000005618) ENSMMMG00000005630 PPP3R1 (ENSMMMG00000005651) PNO1 (ENSMMMG00000005661) DNAAF10 (ENSMMMG00000005668) ##22 C1D (ENSMMMG00000005685) ETAA1 (ENSMMMG00000005704) ENSMMMG00000005754 ENSMMMG00000005757 MEIS1 (ENSMMMG00000005763) ENSMMMG00000005870 ENSMMMG00000005873 SPRED2 (ENSMMMG00000005882) ENSMMMG00000005906 ACTR2 (ENSMMMG00000005910) RAB1A (ENSMMMG00000005929) CEP68 (ENSMMMG00000005980) SLC1A4 (ENSMMMG00000006026) ENSMMMG00000006042 ENSMMMG00000006048 Eurasian red squirrel MODERN SPECIES 5 ENSSVLG00005022183 ANTXR1 (ENSSVLG00005022150) GKN1 (ENSSVLG00005022077) GKN2 (ENSSVLG00005021978) ENSSVLG00005021937 BMP10 (ENSSVLG00005021912) ARHGAP25 (ENSSVLG00005021763) PROKR1 (ENSSVLG00005021730) ENSSVLG00005021708 APLF (ENSSVLG00005021663) FBXO48 (ENSSVLG00005021637) PLEK (ENSSVLG00005021563) CNRIP1 (ENSSVLG00005021502) PPP3R1 (ENSSVLG00005021432) PNO1 (ENSSVLG00005021413) DNAAF10 (ENSSVLG00005021285) ##22 C1D (ENSSVLG00005021246) ETAA1 (ENSSVLG00005021110) MEIS1 (ENSSVLG00005020894) ENSSVLG00005020854 SPRED2 (ENSSVLG00005020765) ACTR2 (ENSSVLG00005020565) ENSSVLG00005020476 CEP68 (ENSSVLG00005020379) SOWAHC (ENSSVLG00005020212) SEPTIN10 (ENSSVLG00005020034) SH3RF3 (ENSSVLG00005019900) EDAR (ENSSVLG00005019677) CCDC138 (ENSSVLG00005019503) RANBP2 (ENSSVLG00005018522) ENSSVLG00005018289 Rodentia_B ANCESTRAL SPECIES 14 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Myomorpha ANCESTRAL SPECIES 24 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Muroidea ANCESTRAL SPECIES 21 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Muroidea_A ANCESTRAL SPECIES 13 ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Cricetidae ANCESTRAL SPECIES 14 ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Cricetinae ANCESTRAL SPECIES 37 ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 121 Spata48 (ENSCGRG00001004222) Ikzf1 (ENSCGRG00001015985) Fignl1 (ENSCGRG00001005568) Ddc (ENSCGRG00001020321) Grb10 (ENSCGRG00001018605) Cobl (ENSCGRG00001015912) ENSCGRG00001016899 Vstm2a (ENSCGRG00001018623) ENSCGRG00001010828 Egfr (ENSCGRG00001020721) Fbxo48 (ENSCGRG00001017787) Plek (ENSCGRG00001023663) Cnrip1 (ENSCGRG00001014944) Ppp3r1 (ENSCGRG00001020769) ENSCGRG00001007472 ENSCGRG00001017610 ##22 C1d (ENSCGRG00001023376) Etaa1 (ENSCGRG00001020354) Meis1 (ENSCGRG00001009447) Spred2 (ENSCGRG00001015924) ENSCGRG00001017243 ENSCGRG00001012691 Cep68 (ENSCGRG00001014327) Slc1a4 (ENSCGRG00001017715) ENSCGRG00001005474 Sertad2 (ENSCGRG00001009657) Aftph (ENSCGRG00001016162) ENSCGRG00001009126 Gm5065 (ENSCGRG00001013868) Peli1 (ENSCGRG00001021958) Vps54 (ENSCGRG00001009286) Chinese hamster chok1gshd MODERN SPECIES 1 Ccdc110 (ENSCGRG00001005516) 1700029J07Rik (ENSCGRG00001013769) Ufsp2 (ENSCGRG00001016637) Ankrd37 (ENSCGRG00001015273) Lrp2bp (ENSCGRG00001005458) Snx25 (ENSCGRG00001013747) Cfap97 (ENSCGRG00001012133) Slc25a4 (ENSCGRG00001007127) ENSCGRG00001003795 Helt (ENSCGRG00001013119) Acsl1 (ENSCGRG00001012242) Cenpu (ENSCGRG00001024299) Primpol (ENSCGRG00001016107) CASP 3 (ENSCGRG00001015469) Irf2 (ENSCGRG00001014578) ENSCGRG00001014136 ##22 Enpp6 (ENSCGRG00001013812) Stox2 (ENSCGRG00001013096) ENSCGRG00001003901 Trappc11 (ENSCGRG00001018304) Rwdd4a (ENSCGRG00001018945) Ing2 (ENSCGRG00001017801) Cdkn2aip (ENSCGRG00001016194) ENSCGRG00001015210 Wwc2 (ENSCGRG00001016882) Dctd (ENSCGRG00001016053) Tenm3 (ENSCGRG00001021107) Aga (ENSCGRG00001019108) Neil3 (ENSCGRG00001018596) Vegfc (ENSCGRG00001014310) Spcs3 (ENSCGRG00001013944) Golden Hamster MODERN SPECIES 639 Prdm1 (ENSMAUG00000021820) Prep (ENSMAUG00000009728) Popdc3 (ENSMAUG00000000723) Bves (ENSMAUG00000001250) Lin28b (ENSMAUG00000006523) Hace1 (ENSMAUG00000012759) Grik2 (ENSMAUG00000012525) Ascc3 (ENSMAUG00000018304) Sim1 (ENSMAUG00000021356) Egfr (ENSMAUG00000000581) Fbxo48 (ENSMAUG00000020533) Plek (ENSMAUG00000011299) Cnrip1 (ENSMAUG00000019592) Ppp3r1 (ENSMAUG00000014614) Pno1 (ENSMAUG00000014995) Dnaaf10 (ENSMAUG00000011603) ##22 C1d (ENSMAUG00000008974) Etaa1 (ENSMAUG00000010594) Meis1 (ENSMAUG00000001130) Spred2 (ENSMAUG00000013657) Actr2 (ENSMAUG00000008458) Rab1a (ENSMAUG00000012156) Cep68 (ENSMAUG00000014820) Slc1a4 (ENSMAUG00000019775) Sertad2 (ENSMAUG00000004242) Aftph (ENSMAUG00000016557) ENSMAUG00000015033 Peli1 (ENSMAUG00000012937) Vps54 (ENSMAUG00000010788) ENSMAUG00000012689 Mdh1 (ENSMAUG00000018086) Cricetidae_B ANCESTRAL SPECIES 9 ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Prairie vole MODERN SPECIES 92 Pom121l12 (ENSMOCG00000017420) ENSMOCG00000002960 Vstm2a (ENSMOCG00000004039) ENSMOCG00000001784 ENSMOCG00000004092 Egfr (ENSMOCG00000000900) Fbxo48 (ENSMOCG00000015915) Plek (ENSMOCG00000018168) Cnrip1 (ENSMOCG00000004432) Ppp3r1 (ENSMOCG00000012867) Pno1 (ENSMOCG00000017268) Dnaaf10 (ENSMOCG00000000313) ##22 C1d (ENSMOCG00000010860) Etaa1 (ENSMOCG00000018537) Meis1 (ENSMOCG00000016359) Spred2 (ENSMOCG00000014005) Actr2 (ENSMOCG00000008248) Rab1a (ENSMOCG00000017022) Cep68 (ENSMOCG00000003444) Slc1a4 (ENSMOCG00000001173) Sertad2 (ENSMOCG00000002173) Aftph (ENSMOCG00000015081) ENSMOCG00000003932 Gm5065 (ENSMOCG00000014300) Peli1 (ENSMOCG00000016437) Vps54 (ENSMOCG00000009563) Ugp2 (ENSMOCG00000009715) Northern American deer mouse MODERN SPECIES 1 Ikzf1 (ENSPEMG00000014899) Fignl1 (ENSPEMG00000006051) Ddc (ENSPEMG00000006473) Grb10 (ENSPEMG00000014827) Cobl (ENSPEMG00000012700) ENSPEMG00000027900 ENSPEMG00000030198 Vstm2a (ENSPEMG00000028365) Sec61g (ENSPEMG00000020941) Egfr (ENSPEMG00000012745) Fbxo48 (ENSPEMG00000023069) Plek (ENSPEMG00000022796) Cnrip1 (ENSPEMG00000031287) Ppp3r1 (ENSPEMG00000021806) Pno1 (ENSPEMG00000022989) Dnaaf10 (ENSPEMG00000022118) ##22 ENSPEMG00000026465 Etaa1 (ENSPEMG00000011918) Meis1 (ENSPEMG00000008113) ENSPEMG00000012914 ENSPEMG00000028236 Spred2 (ENSPEMG00000029042) Actr2 (ENSPEMG00000015727) ENSPEMG00000025517 Rab1a (ENSPEMG00000009340) Cep68 (ENSPEMG00000002161) Slc1a4 (ENSPEMG00000018063) ENSPEMG00000016241 Sertad2 (ENSPEMG00000027852) Aftph (ENSPEMG00000010156) ENSPEMG00000015267 Murinae ANCESTRAL SPECIES 12 ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.s ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Mus ANCESTRAL SPECIES 14 ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319 ENSGT00940000155450 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.s ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Mus_A ANCESTRAL SPECIES 2 ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319.cb ENSGT00940000155450 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.s ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Mus_B ANCESTRAL SPECIES 2 ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319.cb ENSGT00940000155450 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.s ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Mouse MODERN SPECIES 2 Spata48 (ENSMUSG00000020191) 4930512M02Rik (ENSMUSG00000062511) Ikzf1 (ENSMUSG00000018654) Fignl1 (ENSMUSG00000035455) Ddc (ENSMUSG00000020182) Grb10 (ENSMUSG00000020176) Cobl (ENSMUSG00000020173) Pom121l12 (ENSMUSG00000084135) Vstm2a (ENSMUSG00000048834) Sec61g (ENSMUSG00000078974) Egfr (ENSMUSG00000020122) Fbxo48 (ENSMUSG00000044966) Plek (ENSMUSG00000020120) Cnrip1 (ENSMUSG00000044629) Ppp3r1 (ENSMUSG00000033953) Dnaaf10 (ENSMUSG00000078970) ##22 Pno1 (ENSMUSG00000020116) C1d (ENSMUSG00000000581) Etaa1 (ENSMUSG00000016984) Meis1 (ENSMUSG00000020160) Spred2 (ENSMUSG00000045671) Actr2 (ENSMUSG00000020152) Rab1a (ENSMUSG00000020149) Cep68 (ENSMUSG00000044066) Slc1a4 (ENSMUSG00000020142) Sertad2 (ENSMUSG00000049800) Aftph (ENSMUSG00000049659) Lgalsl (ENSMUSG00000042363) Peli1 (ENSMUSG00000020134) Vps54 (ENSMUSG00000020128) Ugp2 (ENSMUSG00000001891) Mus_C ANCESTRAL SPECIES 3 ENSGT00520000055647.a ENSGT00940000162844 ENSGT00940000156782.c ENSGT00940000161552 ENSGT00940000156004 ENSGT00940000155909 ENSGT00530000063608.A ENSGT00940000160556 ENSGT00390000001319.cb ENSGT00940000155450 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.s ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a spretus MODERN SPECIES 2 Vwc2 (MGP_SPRETEiJ_G0016935) Zpbp (MGP_SPRETEiJ_G0016936) Spata48 (MGP_SPRETEiJ_G0016937) Ikzf1 (MGP_SPRETEiJ_G0016938) Fignl1 (MGP_SPRETEiJ_G0016939) Ddc (MGP_SPRETEiJ_G0016940) Grb10 (MGP_SPRETEiJ_G0016941) Cobl (MGP_SPRETEiJ_G0016942) MGP_SPRETEiJ_G0016943 Sec61g (MGP_SPRETEiJ_G0016944) Egfr (MGP_SPRETEiJ_G0016945) Fbxo48 (MGP_SPRETEiJ_G0016946) Plek (MGP_SPRETEiJ_G0016947) MGP_SPRETEiJ_G0016948 Ppp3r1 (MGP_SPRETEiJ_G0016949) Dnaaf10 (MGP_SPRETEiJ_G0016950) ##22 Pno1 (MGP_SPRETEiJ_G0016951) C1d (MGP_SPRETEiJ_G0016952) Etaa1 (MGP_SPRETEiJ_G0016953) Meis1 (MGP_SPRETEiJ_G0016954) Asb12 (MGP_SPRETEiJ_G0016955) Spred2 (MGP_SPRETEiJ_G0016956) Actr2 (MGP_SPRETEiJ_G0016957) Rab1a (MGP_SPRETEiJ_G0016958) Cep68 (MGP_SPRETEiJ_G0016959) Slc1a4 (MGP_SPRETEiJ_G0016960) Sertad2 (MGP_SPRETEiJ_G0016961) Aftph (MGP_SPRETEiJ_G0016962) Lgalsl (MGP_SPRETEiJ_G0016963) Peli1 (MGP_SPRETEiJ_G0016964) Vps54 (MGP_SPRETEiJ_G0016965) Steppe mouse MODERN SPECIES 2972 ENSMSIG00000001187 ENSMSIG00000001156 Egfr (ENSMSIG00000001122) Fbxo48 (ENSMSIG00000001105) Plek (ENSMSIG00000001053) ENSMSIG00000001023 ENSMSIG00000000988 ENSMSIG00000000962 Dnaaf10 (ENSMSIG00000000934) ##22 C1d (ENSMSIG00000000910) Etaa1 (ENSMSIG00000000849) ENSMSIG00000000838 Ryukyu mouse MODERN SPECIES 2 Vwc2 (MGP_CAROLIEiJ_G0016093) Zpbp (MGP_CAROLIEiJ_G0016094) Spata48 (MGP_CAROLIEiJ_G0016095) Ikzf1 (MGP_CAROLIEiJ_G0016096) Fignl1 (MGP_CAROLIEiJ_G0016097) Ddc (MGP_CAROLIEiJ_G0016098) Grb10 (MGP_CAROLIEiJ_G0016099) Cobl (MGP_CAROLIEiJ_G0016100) MGP_CAROLIEiJ_G0016101 Sec61g (MGP_CAROLIEiJ_G0016102) Egfr (MGP_CAROLIEiJ_G0016103) Fbxo48 (MGP_CAROLIEiJ_G0016104) Plek (MGP_CAROLIEiJ_G0016105) Cnrip1 (MGP_CAROLIEiJ_G0016106) Ppp3r1 (MGP_CAROLIEiJ_G0016107) Dnaaf10 (MGP_CAROLIEiJ_G0016108) ##22 Pno1 (MGP_CAROLIEiJ_G0016109) C1d (MGP_CAROLIEiJ_G0016110) Etaa1 (MGP_CAROLIEiJ_G0016111) Meis1 (MGP_CAROLIEiJ_G0016112) Spred2 (MGP_CAROLIEiJ_G0016113) Actr2 (MGP_CAROLIEiJ_G0016114) Rab1a (MGP_CAROLIEiJ_G0016115) Cep68 (MGP_CAROLIEiJ_G0016116) Slc1a4 (MGP_CAROLIEiJ_G0016117) Sertad2 (MGP_CAROLIEiJ_G0016118) Aftph (MGP_CAROLIEiJ_G0016119) Gm5065 (MGP_CAROLIEiJ_G0016120) Peli1 (MGP_CAROLIEiJ_G0016121) Vps54 (MGP_CAROLIEiJ_G0016122) Ugp2 (MGP_CAROLIEiJ_G0016123) Shrew mouse MODERN SPECIES 4 Zpbp (MGP_PahariEiJ_G0016797) Spata48 (MGP_PahariEiJ_G0016796) Ikzf1 (MGP_PahariEiJ_G0016795) Fignl1 (MGP_PahariEiJ_G0016794) Ddc (MGP_PahariEiJ_G0016793) Grb10 (MGP_PahariEiJ_G0016792) Cobl (MGP_PahariEiJ_G0016791) MGP_PahariEiJ_G0016790 Sec61g (MGP_PahariEiJ_G0016789) Egfr (MGP_PahariEiJ_G0016788) Fbxo48 (MGP_PahariEiJ_G0016787) Plek (MGP_PahariEiJ_G0016786) MGP_PahariEiJ_G0016785 Ppp3r1 (MGP_PahariEiJ_G0016784) Pno1 (MGP_PahariEiJ_G0016783) Dnaaf10 (MGP_PahariEiJ_G0016782) ##22 C1d (MGP_PahariEiJ_G0016781) Etaa1 (MGP_PahariEiJ_G0016780) Meis1 (MGP_PahariEiJ_G0016779) Spred2 (MGP_PahariEiJ_G0016778) Actr2 (MGP_PahariEiJ_G0016777) Rab1a (MGP_PahariEiJ_G0016776) Cep68 (MGP_PahariEiJ_G0016775) Slc1a4 (MGP_PahariEiJ_G0016774) Sertad2 (MGP_PahariEiJ_G0016773) Aftph (MGP_PahariEiJ_G0016772) Lgalsl (MGP_PahariEiJ_G0016771) MGP_PahariEiJ_G0016770 Peli1 (MGP_PahariEiJ_G0016769) Vps54 (MGP_PahariEiJ_G0016768) Ugp2 (MGP_PahariEiJ_G0016767) Upper Galilee mountains blind mole rat MODERN SPECIES 859 Plek (ENSNGAG00000020332) Cnrip1 (ENSNGAG00000019719) Ppp3r1 (ENSNGAG00000012099) Pno1 (ENSNGAG00000010165) ENSNGAG00000003050 ENSNGAG00000011329 ##22 ENSNGAG00000011872 Etaa1 (ENSNGAG00000010247) Meis1 (ENSNGAG00000013041) Lesser Egyptian jerboa MODERN SPECIES 74 Galm (ENSJJAG00000023585) Hnrnpll (ENSJJAG00000024192) Kidins220 (ENSJJAG00000015011) Mboat2 (ENSJJAG00000011516) Asap2 (ENSJJAG00000001039) Itgb1bp1 (ENSJJAG00000022716) Cpsf3 (ENSJJAG00000023415) Iah1 (ENSJJAG00000015466) Adam17 (ENSJJAG00000020057) Ywhaq (ENSJJAG00000008194) ENSJJAG00000011210 Plek (ENSJJAG00000005757) Cnrip1 (ENSJJAG00000016204) Ppp3r1 (ENSJJAG00000016869) Pno1 (ENSJJAG00000022862) Dnaaf10 (ENSJJAG00000019935) ##22 ENSJJAG00000023186 ENSJJAG00000021064 ENSJJAG00000011226 Meis1 (ENSJJAG00000015459) Spred2 (ENSJJAG00000020977) Actr2 (ENSJJAG00000008642) Rab1a (ENSJJAG00000014396) Cep68 (ENSJJAG00000016421) Slc1a4 (ENSJJAG00000002418) Sertad2 (ENSJJAG00000015989) ENSJJAG00000020384 Gm5065 (ENSJJAG00000016772) Peli1 (ENSJJAG00000000296) Vps54 (ENSJJAG00000012401) Ugp2 (ENSJJAG00000014432) Kangaroo rat MODERN SPECIES 382 Nfu1 (ENSDORG00000009394) Gfpt1 (ENSDORG00000015980) Antxr1 (ENSDORG00000026824) Gkn1 (ENSDORG00000013219) Gkn2 (ENSDORG00000015532) Gkn3 (ENSDORG00000029528) Bmp10 (ENSDORG00000012857) Arhgap25 (ENSDORG00000012856) ENSDORG00000012853 Aplf (ENSDORG00000011241) Fbxo48 (ENSDORG00000011239) Plek (ENSDORG00000029923) Cnrip1 (ENSDORG00000025749) Ppp3r1 (ENSDORG00000024931) ENSDORG00000006867 Dnaaf10 (ENSDORG00000006862) ##22 C1d (ENSDORG00000003300) Meis1 (ENSDORG00000008334) Spred2 (ENSDORG00000012174) Actr2 (ENSDORG00000001487) ENSDORG00000028628 Cep68 (ENSDORG00000002111) Slc1a4 (ENSDORG00000002394) Sertad2 (ENSDORG00000025954) ENSDORG00000027058 ENSDORG00000004159 ENSDORG00000027919 Peli1 (ENSDORG00000025404) Vps54 (ENSDORG00000009782) Ugp2 (ENSDORG00000013164) Rasl2-9 (ENSDORG00000027038) Primates ANCESTRAL SPECIES 14 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00390000003682.ib.a ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a Haplorrhini ANCESTRAL SPECIES 15 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Simiiformes ANCESTRAL SPECIES 14 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.l ENSGT00950000183091.A.b ##22 ENSGT00390000015405.s ENSGT00390000009597 ENSGT00940000156327 ENSGT00390000003682.ib.a.a.b ENSGT00940000156841 ENSGT00910000147214 ENSGT00940000154556 ENSGT00940000154958.lb.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a Catarrhini ANCESTRAL SPECIES 17 ENSGT00390000011296 ENSGT00940000158488 ENSGT00910000147556 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.l ENSGT00950000183091.A.b ##22 ENSGT00390000015405.s ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147214 ENSGT00940000154556.tb.a ENSGT00940000154958.lb.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Hominoidea ANCESTRAL SPECIES 18 ENSGT00390000011296 ENSGT00940000158488 ENSGT00910000147556 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.l ENSGT00950000183091.A.b ##22 ENSGT00390000015405.s ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147214 ENSGT00940000154556.tb.a ENSGT00940000154958.lb.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000182901.a.a.a.b.b ENSGT00950000183050.b.b.a Hominidae ANCESTRAL SPECIES 19 ENSGT00390000011296 ENSGT00940000158488 ENSGT00910000147556 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.l ENSGT00950000183091.A.b ##22 ENSGT00390000015405.s ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147214 ENSGT00940000154556.tb.a ENSGT00940000154958.lb.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000182901.a.a.a.b.b ENSGT00950000183050.b.b.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 18 ENSGT00940000158488 ENSGT00910000147556 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00940000164467.d.b.b.b ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885.k ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.l ENSGT00950000183091.A.b ##22 ENSGT00390000015405.s.a ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556.tb.a.b ENSGT00910000147214 ENSGT00940000154556.tb.a.a.a ENSGT00940000154958.lb.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000182901.a.a.a.b.b Gorilla MODERN SPECIES 14 ENSGGOG00000036388 ANTXR1 (ENSGGOG00000005625) GKN1 (ENSGGOG00000009521) GKN2 (ENSGGOG00000000046) BMP10 (ENSGGOG00000044023) ARHGAP25 (ENSGGOG00000009658) PROKR1 (ENSGGOG00000016270) APLF (ENSGGOG00000034832) ENSGGOG00000041724 FBXO48 (ENSGGOG00000007346) PLEK (ENSGGOG00000026840) ENSGGOG00000005831 CNRIP1 (ENSGGOG00000022874) PPP3R1 (ENSGGOG00000039766) PNO1 (ENSGGOG00000009158) DNAAF10 (ENSGGOG00000010285) ##22 ENSGGOG00000023297 ENSGGOG00000025982 ETAA1 (ENSGGOG00000014411) ENSGGOG00000005446 SPRED2 (ENSGGOG00000007267) ENSGGOG00000041600 ENSGGOG00000008505 RAB1A (ENSGGOG00000026603) CEP68 (ENSGGOG00000005826) SLC1A4 (ENSGGOG00000011211) AFTPH (ENSGGOG00000008449) ENSGGOG00000023155 LGALSL (ENSGGOG00000006386) ENSGGOG00000022216 PELI1 (ENSGGOG00000013460) Homo/Pan group ANCESTRAL SPECIES 14 ENSGT00940000155968 ENSGT00910000147768 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00940000164467.d.b.b.b ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885.k ENSGT00390000004284 ENSGT00950000183091.A.b ##22 ENSGT00390000015405.s.a ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556.tb.a.b ENSGT00910000147214 ENSGT00940000154556.tb.a.a.a ENSGT00940000154958.lb.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a Human MODERN SPECIES 11 AAK1 (ENSG00000115977) NFU1 (ENSG00000169599) GFPT1 (ENSG00000198380) ANTXR1 (ENSG00000169604) GKN1 (ENSG00000169605) GKN2 (ENSG00000183607) BMP10 (ENSG00000163217) ARHGAP25 (ENSG00000163219) PROKR1 (ENSG00000169618) APLF (ENSG00000169621) FBXO48 (ENSG00000204923) PLEK (ENSG00000115956) CNRIP1 (ENSG00000119865) PPP3R1 (ENSG00000221823) PNO1 (ENSG00000115946) DNAAF10 (ENSG00000243667) ##22 C1D (ENSG00000197223) ETAA1 (ENSG00000143971) MEIS1 (ENSG00000143995) SPRED2 (ENSG00000198369) ACTR2 (ENSG00000138071) RAB1A (ENSG00000138069) CEP68 (ENSG00000011523) SLC1A4 (ENSG00000115902) SERTAD2 (ENSG00000179833) AFTPH (ENSG00000119844) LGALSL (ENSG00000119862) PELI1 (ENSG00000197329) VPS54 (ENSG00000143952) UGP2 (ENSG00000169764) MDH1 (ENSG00000014641) Pan ANCESTRAL SPECIES 17 ENSGT00940000155968 ENSGT00910000147768 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00940000164467.d.b.b.b ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885.k ENSGT00390000004284 ENSGT00950000183091.A.b ##22 ENSGT00390000018052.l ENSGT00390000015405.s.b ENSGT00390000015405.s.a ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147214 ENSGT00940000154556.tb.a.a.a ENSGT00940000154958.lb.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 Bonobo MODERN SPECIES 14 ENSPPAG00000039549 NFU1 (ENSPPAG00000035496) GFPT1 (ENSPPAG00000043271) ANTXR1 (ENSPPAG00000038605) GKN1 (ENSPPAG00000035903) GKN2 (ENSPPAG00000042895) BMP10 (ENSPPAG00000041693) ARHGAP25 (ENSPPAG00000035053) PROKR1 (ENSPPAG00000042374) ENSPPAG00000036471 APLF (ENSPPAG00000033703) FBXO48 (ENSPPAG00000030285) PLEK (ENSPPAG00000036621) CNRIP1 (ENSPPAG00000036249) PNO1 (ENSPPAG00000039314) ENSPPAG00000032606 ##22 ENSPPAG00000037847 ETAA1 (ENSPPAG00000034986) ENSPPAG00000037169 SPRED2 (ENSPPAG00000042240) ENSPPAG00000026570 ENSPPAG00000030634 RAB1A (ENSPPAG00000030253) CEP68 (ENSPPAG00000026445) SLC1A4 (ENSPPAG00000041051) SERTAD2 (ENSPPAG00000033136) ENSPPAG00000031785 AFTPH (ENSPPAG00000028223) LGALSL (ENSPPAG00000039473) PELI1 (ENSPPAG00000044117) VPS54 (ENSPPAG00000028874) Chimpanzee MODERN SPECIES 14 AAK1 (ENSPTRG00000012018) NFU1 (ENSPTRG00000012016) GFPT1 (ENSPTRG00000024129) ANTXR1 (ENSPTRG00000012011) GKN1 (ENSPTRG00000012010) GKN2 (ENSPTRG00000012009) BMP10 (ENSPTRG00000051530) ARHGAP25 (ENSPTRG00000012007) PROKR1 (ENSPTRG00000051956) ENSPTRG00000047822 APLF (ENSPTRG00000012004) FBXO48 (ENSPTRG00000030457) PLEK (ENSPTRG00000012003) CNRIP1 (ENSPTRG00000012002) PNO1 (ENSPTRG00000011999) ENSPTRG00000041941 ##22 C1D (ENSPTRG00000023558) ETAA1 (ENSPTRG00000011996) MEIS1 (ENSPTRG00000011994) SPRED2 (ENSPTRG00000011992) ENSPTRG00000047998 ENSPTRG00000011990 RAB1A (ENSPTRG00000011989) CEP68 (ENSPTRG00000011988) SLC1A4 (ENSPTRG00000011985) SERTAD2 (ENSPTRG00000030469) ENSPTRG00000045952 AFTPH (ENSPTRG00000011983) LGALSL (ENSPTRG00000047293) PELI1 (ENSPTRG00000023869) VPS54 (ENSPTRG00000011978) Orangutan MODERN SPECIES 14 AAK1 (ENSPPYG00000012336) NFU1 (ENSPPYG00000012339) GFPT1 (ENSPPYG00000012340) ANTXR1 (ENSPPYG00000030579) GKN1 (ENSPPYG00000012343) GKN2 (ENSPPYG00000012344) BMP10 (ENSPPYG00000012345) ARHGAP25 (ENSPPYG00000012346) PROKR1 (ENSPPYG00000012347) APLF (ENSPPYG00000012348) FBXO48 (ENSPPYG00000012736) PLEK (ENSPPYG00000040535) CNRIP1 (ENSPPYG00000012351) PPP3R1 (ENSPPYG00000031425) PNO1 (ENSPPYG00000033861) DNAAF10 (ENSPPYG00000012352) ##22 C1D (ENSPPYG00000012354) ETAA1 (ENSPPYG00000012355) ENSPPYG00000012356 SPRED2 (ENSPPYG00000012358) ACTR2 (ENSPPYG00000012359) RAB1A (ENSPPYG00000012360) CEP68 (ENSPPYG00000012361) SLC1A4 (ENSPPYG00000041756) SERTAD2 (ENSPPYG00000035823) AFTPH (ENSPPYG00000012364) ENSPPYG00000012365 LGALSL (ENSPPYG00000012366) PELI1 (ENSPPYG00000012369) VPS54 (ENSPPYG00000012370) UGP2 (ENSPPYG00000012371) Gibbon MODERN SPECIES 4 NFU1 (ENSNLEG00000010101) GFPT1 (ENSNLEG00000010084) ENSNLEG00000034994 ANTXR1 (ENSNLEG00000010058) GKN1 (ENSNLEG00000029810) GKN2 (ENSNLEG00000010046) BMP10 (ENSNLEG00000010043) ARHGAP25 (ENSNLEG00000010028) PROKR1 (ENSNLEG00000010024) APLF (ENSNLEG00000010019) FBXO48 (ENSNLEG00000010016) PLEK (ENSNLEG00000010002) CNRIP1 (ENSNLEG00000009999) PPP3R1 (ENSNLEG00000026538) PNO1 (ENSNLEG00000034233) DNAAF10 (ENSNLEG00000030882) ##22 ENSNLEG00000032919 ETAA1 (ENSNLEG00000009972) ENSNLEG00000009963 ENSNLEG00000027615 SPRED2 (ENSNLEG00000009959) ACTR2 (ENSNLEG00000009948) RAB1A (ENSNLEG00000009944) ENSNLEG00000009939 SLC1A4 (ENSNLEG00000009927) SERTAD2 (ENSNLEG00000029151) ENSNLEG00000009923 AFTPH (ENSNLEG00000009902) LGALSL (ENSNLEG00000031680) ENSNLEG00000028443 PELI1 (ENSNLEG00000009891) Cercopithecidae ANCESTRAL SPECIES 18 ENSGT00390000011296 ENSGT00940000158488 ENSGT00910000147556 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.l ENSGT00950000183091.A.b ##22 ENSGT00390000015405.s ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000154556.tb.a ENSGT00940000154958.mb ENSGT00940000154958.lb.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a Cercopithecinae ANCESTRAL SPECIES 17 ENSGT00390000011296 ENSGT00940000158488 ENSGT00910000147556 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.l.b ENSGT00950000183091.A.b ##22 ENSGT00390000015405.s ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556.tb.a ENSGT00940000154958.mb ENSGT00940000154958.lb.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Vervet Monkey MODERN SPECIES 5 AAK1 (ENSCSAG00000015041) ENSCSAG00000019443 NFU1 (ENSCSAG00000014991) GFPT1 (ENSCSAG00000014984) ANTXR1 (ENSCSAG00000014972) GKN1 (ENSCSAG00000014956) GKN2 (ENSCSAG00000014947) BMP10 (ENSCSAG00000014937) ARHGAP25 (ENSCSAG00000014930) APLF (ENSCSAG00000014912) FBXO48 (ENSCSAG00000014884) PLEK (ENSCSAG00000014878) CNRIP1 (ENSCSAG00000014867) PPP3R1 (ENSCSAG00000014862) PNO1 (ENSCSAG00000014847) DNAAF10 (ENSCSAG00000014819) ##22 C1D (ENSCSAG00000014811) ETAA1 (ENSCSAG00000014804) MEIS1 (ENSCSAG00000014795) SPRED2 (ENSCSAG00000014788) ACTR2 (ENSCSAG00000014779) ENSCSAG00000014775 CEP68 (ENSCSAG00000014763) SLC1A4 (ENSCSAG00000014735) ENSCSAG00000019444 SERTAD2 (ENSCSAG00000019445) AFTPH (ENSCSAG00000014726) LGALSL (ENSCSAG00000014717) PELI1 (ENSCSAG00000014710) VPS54 (ENSCSAG00000014705) UGP2 (ENSCSAG00000014697) Cercopithecinae_a ANCESTRAL SPECIES 17 ENSGT00390000011296 ENSGT00940000158488 ENSGT00910000147556 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.l.b ENSGT00950000183091.A.b ##22 ENSGT00390000015405.s ENSGT00390000010283.ab.a ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000155590.g.b ENSGT00910000147398 ENSGT00940000156841 ENSGT00940000154556.tb.a ENSGT00940000154958.lb.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 Macaca ANCESTRAL SPECIES 17 ENSGT00390000008255 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.l.b ENSGT00950000183091.A.b ##22 ENSGT00390000015405.s ENSGT00390000010283.ab.a ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000155590.g.b ENSGT00910000147398 ENSGT00940000156841 ENSGT00940000154556.tb.a ENSGT00940000154958.lb.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 Pig-tailed macaque MODERN SPECIES 341 ANTXR1 (ENSMNEG00000042903) ENSMNEG00000025946 GKN1 (ENSMNEG00000043462) GKN2 (ENSMNEG00000031833) ENSMNEG00000032842 BMP10 (ENSMNEG00000042295) ARHGAP25 (ENSMNEG00000037188) ENSMNEG00000007960 PROKR1 (ENSMNEG00000037205) APLF (ENSMNEG00000028788) FBXO48 (ENSMNEG00000026784) PLEK (ENSMNEG00000029803) CNRIP1 (ENSMNEG00000028096) PPP3R1 (ENSMNEG00000043603) ENSMNEG00000031066 DNAAF10 (ENSMNEG00000027774) ##22 C1D (ENSMNEG00000040612) ENSMNEG00000038737 ETAA1 (ENSMNEG00000043227) MEIS1 (ENSMNEG00000037352) ENSMNEG00000023818 ENSMNEG00000004414 SPRED2 (ENSMNEG00000028343) ACTR2 (ENSMNEG00000044163) ENSMNEG00000042121 CEP68 (ENSMNEG00000032212) SLC1A4 (ENSMNEG00000004689) ENSMNEG00000006388 SERTAD2 (ENSMNEG00000008861) ENSMNEG00000025227 AFTPH (ENSMNEG00000040816) Macaca_a ANCESTRAL SPECIES 15 ENSGT00390000008255 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.l.b ENSGT00950000183091.A.b ##22 ENSGT00390000015405.s.c ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556.tb.a ENSGT00940000154958.lb.a.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Rhesus MODERN SPECIES 4 ENSMMUG00000058336 NFU1 (ENSMMUG00000059210) GFPT1 (ENSMMUG00000013797) ANTXR1 (ENSMMUG00000014244) ENSMMUG00000049123 GKN2 (ENSMMUG00000014242) BMP10 (ENSMMUG00000015055) ARHGAP25 (ENSMMUG00000015052) PROKR1 (ENSMMUG00000052056) APLF (ENSMMUG00000007552) FBXO48 (ENSMMUG00000060845) PLEK (ENSMMUG00000009195) CNRIP1 (ENSMMUG00000046992) PPP3R1 (ENSMMUG00000046264) PNO1 (ENSMMUG00000017461) DNAAF10 (ENSMMUG00000017460) ##22 C1D (ENSMMUG00000017209) ETAA1 (ENSMMUG00000062156) ENSMMUG00000049443 MEIS1 (ENSMMUG00000011216) SPRED2 (ENSMMUG00000044784) ACTR2 (ENSMMUG00000002263) RAB1A (ENSMMUG00000021721) CEP68 (ENSMMUG00000017019) SLC1A4 (ENSMMUG00000010279) SERTAD2 (ENSMMUG00000047067) ENSMMUG00000014862 AFTPH (ENSMMUG00000006503) ENSMMUG00000006504 LGALSL (ENSMMUG00000064711) PELI1 (ENSMMUG00000059267) Crab-eating macaque MODERN SPECIES 4 GFPT1 (ENSMFAG00000003721) ANTXR1 (ENSMFAG00000044025) ENSMFAG00000047324 GKN1 (ENSMFAG00000032957) GKN2 (ENSMFAG00000044673) BMP10 (ENSMFAG00000038780) ARHGAP25 (ENSMFAG00000001418) PROKR1 (ENSMFAG00000043932) APLF (ENSMFAG00000045051) FBXO48 (ENSMFAG00000038551) PLEK (ENSMFAG00000054603) CNRIP1 (ENSMFAG00000035167) PPP3R1 (ENSMFAG00000031560) PNO1 (ENSMFAG00000043544) ENSMFAG00000064848 DNAAF10 (ENSMFAG00000042360) ##22 ENSMFAG00000034261 ENSMFAG00000056299 ETAA1 (ENSMFAG00000039723) MEIS1 (ENSMFAG00000042877) SPRED2 (ENSMFAG00000031151) ACTR2 (ENSMFAG00000044097) ENSMFAG00000061807 ENSMFAG00000046246 ENSMFAG00000064674 ENSMFAG00000049291 CEP68 (ENSMFAG00000041409) SLC1A4 (ENSMFAG00000003847) ENSMFAG00000053049 ENSMFAG00000062833 SERTAD2 (ENSMFAG00000037664) Cercopithecinae_b ANCESTRAL SPECIES 15 ENSGT00390000011296 ENSGT00940000158488 ENSGT00910000147556 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.l.b ENSGT00950000183091.A.b ##22 ENSGT00390000015405.s ENSGT00390000010283.ab.a ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000155590.g.b ENSGT00910000147398 ENSGT00940000156841 ENSGT00940000154556.tb.a ENSGT00940000154958.lb.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 Olive baboon MODERN SPECIES 5 GFPT1 (ENSPANG00000006255) ANTXR1 (ENSPANG00000022518) ENSPANG00000034498 ENSPANG00000047885 GKN1 (ENSPANG00000008629) GKN2 (ENSPANG00000020409) BMP10 (ENSPANG00000049229) ARHGAP25 (ENSPANG00000010754) PROKR1 (ENSPANG00000048102) APLF (ENSPANG00000010484) FBXO48 (ENSPANG00000019905) PLEK (ENSPANG00000005755) CNRIP1 (ENSPANG00000029881) PPP3R1 (ENSPANG00000024026) ENSPANG00000031684 DNAAF10 (ENSPANG00000011915) ##22 C1D (ENSPANG00000002886) ETAA1 (ENSPANG00000007449) MEIS1 (ENSPANG00000008059) ENSPANG00000049032 SPRED2 (ENSPANG00000015698) ACTR2 (ENSPANG00000007073) RAB1A (ENSPANG00000010485) CEP68 (ENSPANG00000009710) SLC1A4 (ENSPANG00000025917) SERTAD2 (ENSPANG00000021214) ENSPANG00000033862 AFTPH (ENSPANG00000019355) LGALSL (ENSPANG00000007113) PELI1 (ENSPANG00000008630) VPS54 (ENSPANG00000022299) Cercopithecinae_d ANCESTRAL SPECIES 32 ENSGT00390000011296 ENSGT00940000158488 ENSGT00910000147556 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.l.b ENSGT00950000183091.A.b ##22 ENSGT00390000015405.s ENSGT00390000010283.ab.a ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000155590.g.b ENSGT00910000147398 ENSGT00940000156841 ENSGT00940000154556.tb.a ENSGT00940000154958.lb.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00390000001858 ENSGT00940000154186.a ENSGT00940000155337 Sooty mangabey MODERN SPECIES 494 NFU1 (ENSCATG00000037550) GFPT1 (ENSCATG00000040348) ANTXR1 (ENSCATG00000031559) GKN1 (ENSCATG00000013735) GKN2 (ENSCATG00000032902) BMP10 (ENSCATG00000013241) ARHGAP25 (ENSCATG00000043043) ENSCATG00000035050 PROKR1 (ENSCATG00000001983) APLF (ENSCATG00000015227) FBXO48 (ENSCATG00000006573) PLEK (ENSCATG00000037750) CNRIP1 (ENSCATG00000037632) PPP3R1 (ENSCATG00000036183) PNO1 (ENSCATG00000018547) DNAAF10 (ENSCATG00000028444) ##22 C1D (ENSCATG00000045336) ENSCATG00000033727 ETAA1 (ENSCATG00000036073) MEIS1 (ENSCATG00000030958) ENSCATG00000012177 ENSCATG00000045181 SPRED2 (ENSCATG00000034117) ACTR2 (ENSCATG00000036025) RAB1A (ENSCATG00000030853) CEP68 (ENSCATG00000032378) SLC1A4 (ENSCATG00000036187) SERTAD2 (ENSCATG00000012102) ENSCATG00000045350 AFTPH (ENSCATG00000032038) LGALSL (ENSCATG00000029852) Drill MODERN SPECIES 917 NFU1 (ENSMLEG00000035773) GFPT1 (ENSMLEG00000028520) ENSMLEG00000006440 ANTXR1 (ENSMLEG00000038172) GKN1 (ENSMLEG00000036299) GKN2 (ENSMLEG00000043292) BMP10 (ENSMLEG00000030154) ARHGAP25 (ENSMLEG00000038657) PROKR1 (ENSMLEG00000037719) APLF (ENSMLEG00000028828) FBXO48 (ENSMLEG00000029566) PLEK (ENSMLEG00000039341) CNRIP1 (ENSMLEG00000039450) PPP3R1 (ENSMLEG00000038265) ENSMLEG00000035878 DNAAF10 (ENSMLEG00000039884) ##22 C1D (ENSMLEG00000027619) Rhinopithecus ANCESTRAL SPECIES 69 ENSGT00390000011296 ENSGT00940000158488 ENSGT00910000147556 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.l ENSGT00950000183091.A.b ##22 Black snub-nosed monkey MODERN SPECIES 1659 NFU1 (ENSRBIG00000036008) GFPT1 (ENSRBIG00000035724) ENSRBIG00000029277 ANTXR1 (ENSRBIG00000044724) GKN1 (ENSRBIG00000037716) GKN2 (ENSRBIG00000039207) BMP10 (ENSRBIG00000030188) ARHGAP25 (ENSRBIG00000044454) PROKR1 (ENSRBIG00000033822) APLF (ENSRBIG00000035737) FBXO48 (ENSRBIG00000036220) PLEK (ENSRBIG00000036643) CNRIP1 (ENSRBIG00000034326) PPP3R1 (ENSRBIG00000000985) PNO1 (ENSRBIG00000038529) DNAAF10 (ENSRBIG00000033088) ##22 Golden snub-nosed monkey MODERN SPECIES 2233 FBXO48 (ENSRROG00000028926) PLEK (ENSRROG00000035016) CNRIP1 (ENSRROG00000033471) PPP3R1 (ENSRROG00000031216) PNO1 (ENSRROG00000009259) DNAAF10 (ENSRROG00000032243) ##22 Platyrrhini ANCESTRAL SPECIES 13 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.l.c ENSGT00950000183091.A.b ##22 ENSGT00390000015405.t ENSGT00390000009597 ENSGT00940000156327 ENSGT00390000003682.ib.a.a.b.a ENSGT00940000156841 ENSGT00910000147214 ENSGT00940000154556 ENSGT00940000154277.a.b.a.b ENSGT00940000154958.lb.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 Cebidae ANCESTRAL SPECIES 15 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.l.c ENSGT00950000183091.A.b ##22 ENSGT00390000015405.t ENSGT00390000009597 ENSGT00940000156327 ENSGT00390000003682.ib.a.a.b.a ENSGT00940000156841 ENSGT00910000147214 ENSGT00940000154556 ENSGT00940000154277.a.b.a.b ENSGT00940000154958.lb.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 Marmoset MODERN SPECIES 5 NFU1 (ENSCJAG00000019156) GFPT1 (ENSCJAG00000019141) ANTXR1 (ENSCJAG00000019111) GKN1 (ENSCJAG00000019108) GKN2 (ENSCJAG00000019101) BMP10 (ENSCJAG00000019096) ARHGAP25 (ENSCJAG00000019073) PROKR1 (ENSCJAG00000019067) ENSCJAG00000078317 APLF (ENSCJAG00000006460) FBXO48 (ENSCJAG00000006473) PLEK (ENSCJAG00000006477) CNRIP1 (ENSCJAG00000039706) PPP3R1 (ENSCJAG00000006498) PNO1 (ENSCJAG00000006564) DNAAF10 (ENSCJAG00000044589) ##22 ENSCJAG00000006589 ENSCJAG00000083243 ETAA1 (ENSCJAG00000006604) MEIS1 (ENSCJAG00000006613) ENSCJAG00000073899 ENSCJAG00000067866 ENSCJAG00000079193 ENSCJAG00000080598 SPRED2 (ENSCJAG00000006693) ACTR2 (ENSCJAG00000006722) ENSCJAG00000046275 ENSCJAG00000074307 ENSCJAG00000072263 CEP68 (ENSCJAG00000006788) SLC1A4 (ENSCJAG00000006795) Cebidae_a ANCESTRAL SPECIES 30 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052.l.c ENSGT00950000183091.A.b ##22 ENSGT00390000015405.t ENSGT00390000009597 ENSGT00940000156327 ENSGT00390000003682.ib.a.a.b.a ENSGT00940000156841 ENSGT00910000147214 ENSGT00940000154556 ENSGT00940000154277.a.b.a.b ENSGT00940000154958.lb.a ENSGT00810000125473.A ENSGT00940000157081 ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a.a.b Capuchin MODERN SPECIES 23 NFU1 (ENSCCAG00000029621) GFPT1 (ENSCCAG00000031415) ANTXR1 (ENSCCAG00000027435) GKN1 (ENSCCAG00000038006) GKN2 (ENSCCAG00000038016) BMP10 (ENSCCAG00000022639) ARHGAP25 (ENSCCAG00000020753) PROKR1 (ENSCCAG00000027029) APLF (ENSCCAG00000021851) FBXO48 (ENSCCAG00000016980) PLEK (ENSCCAG00000026558) CNRIP1 (ENSCCAG00000034672) PPP3R1 (ENSCCAG00000029751) ENSCCAG00000017887 ENSCCAG00000030366 DNAAF10 (ENSCCAG00000018459) ##22 ENSCCAG00000030405 ETAA1 (ENSCCAG00000027189) ENSCCAG00000023051 MEIS1 (ENSCCAG00000020640) SPRED2 (ENSCCAG00000035702) ACTR2 (ENSCCAG00000030047) ENSCCAG00000021773 ENSCCAG00000038117 RAB1A (ENSCCAG00000021869) CEP68 (ENSCCAG00000022595) ENSCCAG00000037790 SLC1A4 (ENSCCAG00000022825) ENSCCAG00000032655 AFTPH (ENSCCAG00000022631) ENSCCAG00000030319 Bolivian squirrel monkey MODERN SPECIES 48 NFU1 (ENSSBOG00000024277) GFPT1 (ENSSBOG00000033878) ANTXR1 (ENSSBOG00000033293) GKN1 (ENSSBOG00000030955) GKN2 (ENSSBOG00000034618) ENSSBOG00000034011 BMP10 (ENSSBOG00000025851) ARHGAP25 (ENSSBOG00000006007) PROKR1 (ENSSBOG00000027190) APLF (ENSSBOG00000023612) FBXO48 (ENSSBOG00000021207) PLEK (ENSSBOG00000031071) CNRIP1 (ENSSBOG00000020258) PPP3R1 (ENSSBOG00000021442) ENSSBOG00000026710 DNAAF10 (ENSSBOG00000035020) ##22 ENSSBOG00000025275 ETAA1 (ENSSBOG00000020086) MEIS1 (ENSSBOG00000000062) ENSSBOG00000018908 SPRED2 (ENSSBOG00000000156) ACTR2 (ENSSBOG00000028028) ENSSBOG00000024339 ENSSBOG00000018757 ENSSBOG00000031295 RAB1A (ENSSBOG00000023732) CEP68 (ENSSBOG00000033296) SLC1A4 (ENSSBOG00000023405) AFTPH (ENSSBOG00000027803) ENSSBOG00000019039 LGALSL (ENSSBOG00000029775) Mas night monkey MODERN SPECIES 521 ENSANAG00000029879 ARHGAP25 (ENSANAG00000024401) PROKR1 (ENSANAG00000023501) APLF (ENSANAG00000019373) FBXO48 (ENSANAG00000025635) PLEK (ENSANAG00000032204) CNRIP1 (ENSANAG00000029323) ENSANAG00000030200 ENSANAG00000021228 DNAAF10 (ENSANAG00000029737) ##22 ENSANAG00000035972 ETAA1 (ENSANAG00000027571) MEIS1 (ENSANAG00000034329) Tarsier MODERN SPECIES 1022 PPP3R1 (ENSTSYG00000019531) PNO1 (ENSTSYG00000004007) WDR92 (ENSTSYG00000003991) ##22 C1D (ENSTSYG00000035739) Strepsirrhini ANCESTRAL SPECIES 13 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Lemuriformes ANCESTRAL SPECIES 19 ENSGT00940000164785 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00390000001858 ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 Lemuriformes_a ANCESTRAL SPECIES 52 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00910000147398 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B Greater bamboo lemur MODERN SPECIES 617 PROKR1 (ENSPSMG00000000830) APLF (ENSPSMG00000000808) ENSPSMG00000000764 PLEK (ENSPSMG00000000754) CNRIP1 (ENSPSMG00000000727) PPP3R1 (ENSPSMG00000000675) PNO1 (ENSPSMG00000000616) DNAAF10 (ENSPSMG00000000572) ##22 C1D (ENSPSMG00000000528) ETAA1 (ENSPSMG00000000519) MEIS1 (ENSPSMG00000000482) SPRED2 (ENSPSMG00000000404) ACTR2 (ENSPSMG00000000347) ENSPSMG00000000286 RAB1A (ENSPSMG00000000273) CEP68 (ENSPSMG00000000219) SLC1A4 (ENSPSMG00000000139) SERTAD2 (ENSPSMG00000024045) AFTPH (ENSPSMG00000024022) LGALSL (ENSPSMG00000023973) Coquerels sifaka MODERN SPECIES 350 ENSPCOG00000014761 ENSPCOG00000011569 GFPT1 (ENSPCOG00000025259) ANTXR1 (ENSPCOG00000015864) GKN1 (ENSPCOG00000015313) GKN2 (ENSPCOG00000021868) BMP10 (ENSPCOG00000014638) ARHGAP25 (ENSPCOG00000019453) PROKR1 (ENSPCOG00000021244) ENSPCOG00000013580 FBXO48 (ENSPCOG00000002660) PLEK (ENSPCOG00000013510) CNRIP1 (ENSPCOG00000024225) PPP3R1 (ENSPCOG00000022338) PNO1 (ENSPCOG00000025019) DNAAF10 (ENSPCOG00000014968) ##22 C1D (ENSPCOG00000016112) ENSPCOG00000026949 ETAA1 (ENSPCOG00000001345) Mouse lemur MODERN SPECIES 26 AAK1 (ENSMICG00000003788) ENSMICG00000044702 GFPT1 (ENSMICG00000035387) ANTXR1 (ENSMICG00000003756) GKN1 (ENSMICG00000003749) GKN2 (ENSMICG00000003743) BMP10 (ENSMICG00000044994) ARHGAP25 (ENSMICG00000003739) PROKR1 (ENSMICG00000045105) ENSMICG00000003735 FBXO48 (ENSMICG00000027392) PLEK (ENSMICG00000003728) CNRIP1 (ENSMICG00000003722) PPP3R1 (ENSMICG00000037583) ENSMICG00000010897 DNAAF10 (ENSMICG00000010876) ##22 C1D (ENSMICG00000032141) ETAA1 (ENSMICG00000033585) MEIS1 (ENSMICG00000017054) SPRED2 (ENSMICG00000006435) ENSMICG00000036415 RAB1A (ENSMICG00000012587) CEP68 (ENSMICG00000037255) SLC1A4 (ENSMICG00000012577) ENSMICG00000041471 ENSMICG00000044806 AFTPH (ENSMICG00000037342) LGALSL (ENSMICG00000031755) PELI1 (ENSMICG00000044746) VPS54 (ENSMICG00000035608) UGP2 (ENSMICG00000006509) Bushbaby MODERN SPECIES 183 GFPT1 (ENSOGAG00000008940) ENSOGAG00000025565 ANTXR1 (ENSOGAG00000012182) GKN1 (ENSOGAG00000012177) GKN2 (ENSOGAG00000012175) ENSOGAG00000033540 BMP10 (ENSOGAG00000012174) ARHGAP25 (ENSOGAG00000025572) PROKR1 (ENSOGAG00000012171) ENSOGAG00000025404 APLF (ENSOGAG00000001798) PLEK (ENSOGAG00000016644) CNRIP1 (ENSOGAG00000016640) PPP3R1 (ENSOGAG00000034876) PNO1 (ENSOGAG00000016637) DNAAF10 (ENSOGAG00000016622) ##22 ETAA1 (ENSOGAG00000011653) MEIS1 (ENSOGAG00000015399) ENSOGAG00000034133 SPRED2 (ENSOGAG00000005690) Atlantogenata ANCESTRAL SPECIES 43 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Xenarthra ANCESTRAL SPECIES 171 ENSGT00390000008255 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 Sloth MODERN SPECIES 7812 DNAAF10 (ENSCHOG00000002893) ##22 Armadillo MODERN SPECIES 575 ENSDNOG00000048896 GFPT1 (ENSDNOG00000006788) ANTXR1 (ENSDNOG00000031105) ENSDNOG00000041148 GKN2 (ENSDNOG00000001948) ENSDNOG00000040031 BMP10 (ENSDNOG00000034853) ARHGAP25 (ENSDNOG00000049368) PROKR1 (ENSDNOG00000007613) APLF (ENSDNOG00000030969) FBXO48 (ENSDNOG00000036869) PLEK (ENSDNOG00000038949) CNRIP1 (ENSDNOG00000000214) PPP3R1 (ENSDNOG00000040628) PNO1 (ENSDNOG00000019079) DNAAF10 (ENSDNOG00000019076) ##22 ENSDNOG00000040804 ETAA1 (ENSDNOG00000034533) ENSDNOG00000038138 MEIS1 (ENSDNOG00000009090) Afrotheria ANCESTRAL SPECIES 46 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Tenrec MODERN SPECIES 1684 ENSETEG00000006703 ENSETEG00000006694 ##22 Afrotheria_a ANCESTRAL SPECIES 45 ENSGT00390000011296 ENSGT00940000158488 ENSGT00940000156522 ENSGT00930000150969.A.c.b.a ENSGT00930000150969.A.c.a ENSGT00930000150969.A.c.b.b ENSGT00940000156279 ENSGT00950000183015.A ENSGT00940000154544.a ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327 ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00950000183050.b.b.a ENSGT00390000000583 ENSGT00940000153464.B ENSGT00530000063410.a Hyrax MODERN SPECIES 7370 PPP3R1 (ENSPCAG00000018907) PNO1 (ENSPCAG00000016146) DNAAF10 (ENSPCAG00000016018) ##22 Elephant MODERN SPECIES 278 NFU1 (ENSLAFG00000011659) GFPT1 (ENSLAFG00000011652) ANTXR1 (ENSLAFG00000021821) GKN1 (ENSLAFG00000002205) GKN2 (ENSLAFG00000012988) ENSLAFG00000032679 BMP10 (ENSLAFG00000001659) ARHGAP25 (ENSLAFG00000016192) PROKR1 (ENSLAFG00000012008) APLF (ENSLAFG00000011551) FBXO48 (ENSLAFG00000026127) PLEK (ENSLAFG00000005718) CNRIP1 (ENSLAFG00000006280) PPP3R1 (ENSLAFG00000022682) PNO1 (ENSLAFG00000000046) DNAAF10 (ENSLAFG00000000042) ##22 C1D (ENSLAFG00000002083) ETAA1 (ENSLAFG00000009209) MEIS1 (ENSLAFG00000003445) SPRED2 (ENSLAFG00000000394) ACTR2 (ENSLAFG00000010273) RAB1A (ENSLAFG00000016666) CEP68 (ENSLAFG00000029833) SLC1A4 (ENSLAFG00000017358) SERTAD2 (ENSLAFG00000032288) AFTPH (ENSLAFG00000007172) LGALSL (ENSLAFG00000018660) PELI1 (ENSLAFG00000010471) VPS54 (ENSLAFG00000021799) UGP2 (ENSLAFG00000000399) MDH1 (ENSLAFG00000016504) Actinopterygii ANCESTRAL SPECIES 19 ENSGT00390000014687 ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00660000097267 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327.l ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00950000183045.C ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00940000166587 Reedfish MODERN SPECIES 6 vps54 (ENSECRG00000019821) ENSECRG00000019880 lgalslb (ENSECRG00000019917) aftpha (ENSECRG00000019951) sertad2b (ENSECRG00000019987) ENSECRG00000020001 rab1ab (ENSECRG00000020049) zgc:153169 (ENSECRG00000020103) ACTR2 (ENSECRG00000020143) spred2b (ENSECRG00000020195) meis1b (ENSECRG00000020236) ENSECRG00000020320 c1d (ENSECRG00000020336) ints9 (ENSECRG00000020351) pno1 (ENSECRG00000020369) dnaaf10 (ENSECRG00000020385) ##22 USP34 (ENSECRG00000020472) ENSECRG00000020605 SANBR (ENSECRG00000020613) pex13 (ENSECRG00000020640) ENSECRG00000020656 ENSECRG00000020676 rel (ENSECRG00000020700) papolg (ENSECRG00000020728) bcl11aa (ENSECRG00000020774) fancl (ENSECRG00000020815) vrk2 (ENSECRG00000020854) ENSECRG00000020918 ccdc85a (ENSECRG00000020939) ENSECRG00000020968 EFEMP1 (ENSECRG00000021047) Neopterygii ANCESTRAL SPECIES 3 ENSGT00940000161298 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000162838 ENSGT00390000007046.b.a.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327.l ENSGT00940000156841 ENSGT00940000154556 ENSGT00940000154958 ENSGT00950000183045.C ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a ENSGT00940000155337 ENSGT00940000166587 ENSGT00950000183050.b.b.b.b Spotted gar MODERN SPECIES 654 SEL1L2 (ENSLOCG00000015982) macrod2 (ENSLOCG00000015985) flrt3 (ENSLOCG00000017360) KIF16B (ENSLOCG00000015987) SNRPB2 (ENSLOCG00000015992) OTOR (ENSLOCG00000015995) pcsk2 (ENSLOCG00000015998) BFSP1 (ENSLOCG00000016001) prokr1b (ENSLOCG00000016003) APLF (ENSLOCG00000016006) fbxo48 (ENSLOCG00000016009) plek (ENSLOCG00000016011) cnrip1a (ENSLOCG00000016014) ppp3r1a (ENSLOCG00000016015) pno1 (ENSLOCG00000016017) dnaaf10 (ENSLOCG00000016020) ##22 ENSLOCG00000016022 c1d (ENSLOCG00000016024) ENSLOCG00000016025 meis1b (ENSLOCG00000016026) spred2b (ENSLOCG00000016028) actr2a (ENSLOCG00000016032) zgc:153169 (ENSLOCG00000016036) rab1ab (ENSLOCG00000016037) cep68 (ENSLOCG00000016038) slc1a4 (ENSLOCG00000016041) sertad2b (ENSLOCG00000017361) AFTPH (ENSLOCG00000016046) lgalslb (ENSLOCG00000016049) ENSLOCG00000016051 ENSLOCG00000016053 Osteoglossocephalai ANCESTRAL SPECIES 39 ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000157404 ENSGT00940000159704 ENSGT00940000176188 ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00390000010591 ENSGT00390000012248 ENSGT00940000157885 ENSGT00390000004284 ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597 ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556 ENSGT00940000154958 ENSGT00950000183045.C ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b ENSGT00940000154186.a.r ENSGT00390000001858 ENSGT00940000177082 ENSGT00940000155337.`b Osteoglossiformes ANCESTRAL SPECIES 128 ENSGT00940000158513 ENSGT00940000159062.a ENSGT00950000183045.B ENSGT00390000004881 ENSGT00390000014687 ENSGT00940000157404 ENSGT00940000159704.e ENSGT00940000162838.g.a ENSGT00390000007046.b.b.a ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965.a ENSGT00390000016976.a ENSGT00940000166657 ENSGT00940000157885.i ENSGT00390000004284 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00940000156327.k ENSGT00940000156841.a.a ENSGT00940000154556.f P. kingsleyae MODERN SPECIES 11 ENSPKIG00000005198 OTOR (ENSPKIG00000005251) ENSPKIG00000005135 pcsk2 (ENSPKIG00000005087) ENSPKIG00000005067 prokr1b (ENSPKIG00000005050) plek (ENSPKIG00000005025) cnrip1a (ENSPKIG00000005004) ENSPKIG00000004958 dnaaf10 (ENSPKIG00000004908) ##22 c1d (ENSPKIG00000004877) ENSPKIG00000004852 SPRED2 (ENSPKIG00000004810) ACTR2 (ENSPKIG00000004770) zgc:153169 (ENSPKIG00000004744) rab1ab (ENSPKIG00000004714) cep68 (ENSPKIG00000004675) slc1a4 (ENSPKIG00000004639) ENSPKIG00000004619 ENSPKIG00000004596 LGALSL (ENSPKIG00000004562) ENSPKIG00000004509 ENSPKIG00000004483 ugp2b (ENSPKIG00000004404) mdh1ab (ENSPKIG00000004347) Asian bonytongue MODERN SPECIES 19 ENSSFOG00015030709 tasp1 (ENSSFOG00015010078) ENSSFOG00015031537 esf1 (ENSSFOG00015010145) ndufaf5 (ENSSFOG00015010167) flrt3 (ENSSFOG00015010370) MACROD2 (ENSSFOG00015010225) KIF16B (ENSSFOG00015010383) ENSSFOG00015010475 OTOR (ENSSFOG00015010508) pcsk2 (ENSSFOG00015010552) BFSP1 (ENSSFOG00015010667) prokr1b (ENSSFOG00015010694) cnrip1a (ENSSFOG00015010755) plek (ENSSFOG00015010711) dnaaf10 (ENSSFOG00015010775) ##22 c1d (ENSSFOG00015010861) ENSSFOG00015010893 SPRED2 (ENSSFOG00015032832) ACTR2 (ENSSFOG00015011048) zgc:153169 (ENSSFOG00015011091) ENSSFOG00015032633 cep68 (ENSSFOG00015028803) SLC1A4 (ENSSFOG00015011220) ENSSFOG00015028900 ENSSFOG00015011233 ENSSFOG00015027086 lgalsla (ENSSFOG00015028463) ENSSFOG00015011260 ENSSFOG00015032922 ugp2a (ENSSFOG00015011405) Clupeocephala ANCESTRAL SPECIES 37 ENSGT00940000157837.c ENSGT00940000153408.A ENSGT00940000153463.b.a ENSGT00940000157048 ENSGT00940000175262 ENSGT00940000155636.a ENSGT00940000155636.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00940000157885 ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556 ENSGT00940000154958 ENSGT00530000063867.b ENSGT00940000154186.a.r ENSGT00390000001858 ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A ENSGT00940000157081 ENSGT00940000155078.a.b.a.a ENSGT00940000177082 ENSGT00940000155337.`b Euteleosteomorpha ANCESTRAL SPECIES 207 ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Acanthomorphata ANCESTRAL SPECIES 114 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00390000015299.a.b.b.b.c ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00940000168989 ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Euacanthomorphacea ANCESTRAL SPECIES 57 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Percomorphaceae ANCESTRAL SPECIES 46 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Percomorphaceae_B ANCESTRAL SPECIES 4 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00950000183029.B.j.d ENSGT00910000144211 ENSGT00950000183029.A ENSGT00400000024746 ENSGT00940000164334 ENSGT00940000162741 ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Percomorphaceae_C ANCESTRAL SPECIES 18 ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00950000183029.B.j.d ENSGT00400000024746 ENSGT00940000164334 ENSGT00910000144211 ENSGT00940000162741 ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Eupercaria ANCESTRAL SPECIES 15 ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00950000183029.B.j.d ENSGT00400000024746 ENSGT00940000164334 ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT00940000162333 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 Tetraodontidae ANCESTRAL SPECIES 7 ENSGT00940000157373.l ENSGT00940000165449 ENSGT00390000007701 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00950000183091.A.b ##22 ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT01100000263533.b.a.a.a ENSGT00940000162333 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 Tetraodon MODERN SPECIES 9 pank1a (ENSTNIG00000007446) zgc:65997 (ENSTNIG00000007445) nphp1 (ENSTNIG00000007444) ENSTNIG00000007443 ENSTNIG00000009889 slc8a1b (ENSTNIG00000009816) ENSTNIG00000009817 MAP4K3 (ENSTNIG00000009818) ENSTNIG00000009819 slc17a5 (ENSTNIG00000009820) eef1a1b (ENSTNIG00000009821) ddx43 (ENSTNIG00000009822) KCNQ5 (ENSTNIG00000009823) ppp3r1a (ENSTNIG00000009824) pno1 (ENSTNIG00000009825) dnaaf10 (ENSTNIG00000009826) ##22 c1d (ENSTNIG00000009827) meis1b (ENSTNIG00000009828) SPRED2 (ENSTNIG00000009829) actr2a (ENSTNIG00000009830) ENSTNIG00000009831 lgalslb (ENSTNIG00000009832) ENSTNIG00000009833 peli1b (ENSTNIG00000009834) ugp2b (ENSTNIG00000009837) peli1b (ENSTNIG00000009836) ugp2b (ENSTNIG00000009835) MDH1 (ENSTNIG00000009838) WDPCP (ENSTNIG00000009839) otx1 (ENSTNIG00000009840) EHBP1 (ENSTNIG00000009841) Fugu MODERN SPECIES 16 SLC16A12 (ENSTRUG00000027543) pank1a (ENSTRUG00000026863) zgc:65997 (ENSTRUG00000032567) nphp1 (ENSTRUG00000026367) ENSTRUG00000026056 malb (ENSTRUG00000031016) mrps5 (ENSTRUG00000030917) slc8a1b (ENSTRUG00000013345) MAP4K3 (ENSTRUG00000013107) ENSTRUG00000026938 slc17a5 (ENSTRUG00000013027) eef1a1b (ENSTRUG00000012893) ddx43 (ENSTRUG00000012795) KCNQ5 (ENSTRUG00000012601) cnrip1b (ENSTRUG00000012558) dnaaf10 (ENSTRUG00000012303) ##22 pno1 (ENSTRUG00000012470) c1d (ENSTRUG00000012245) ENSTRUG00000022857 meis1b (ENSTRUG00000011993) SPRED2 (ENSTRUG00000011904) actr2a (ENSTRUG00000011717) ENSTRUG00000011707 ENSTRUG00000021877 lgalslb (ENSTRUG00000011696) ENSTRUG00000019803 peli1b (ENSTRUG00000011542) ugp2b (ENSTRUG00000020420) MDH1 (ENSTRUG00000025836) WDPCP (ENSTRUG00000011105) otx1 (ENSTRUG00000011049) Eupecaria_A ANCESTRAL SPECIES 1 ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00950000183029.B.j.d ENSGT00400000024746 ENSGT00940000164334 ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT00940000162333 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 Ballan wrasse MODERN SPECIES 123 zgc:65997 (ENSLBEG00000007406) nphp1 (ENSLBEG00000007428) ENSLBEG00000007457 malb (ENSLBEG00000007475) mrps5 (ENSLBEG00000007499) slc8a1b (ENSLBEG00000007533) ENSLBEG00000007585 MAP4K3 (ENSLBEG00000007665) slc17a5 (ENSLBEG00000007798) EEF1A1 (ENSLBEG00000007846) ddx43 (ENSLBEG00000007913) KCNQ5 (ENSLBEG00000008083) cnrip1b (ENSLBEG00000008256) ppp3r1a (ENSLBEG00000008282) pno1 (ENSLBEG00000008305) dnaaf10 (ENSLBEG00000008344) ##22 c1d (ENSLBEG00000008351) ENSLBEG00000008369 meis1b (ENSLBEG00000008402) SPRED2 (ENSLBEG00000008460) ACTR2 (ENSLBEG00000008499) ENSLBEG00000008542 ENSLBEG00000008560 lgalslb (ENSLBEG00000008580) ENSLBEG00000008607 peli1b (ENSLBEG00000008670) ugp2b (ENSLBEG00000008705) MDH1 (ENSLBEG00000008750) Eupecaria_B ANCESTRAL SPECIES 3 ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00950000183029.B.j.d ENSGT00400000024746 ENSGT00940000164334 ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT00940000162333 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 Eupecaria_C ANCESTRAL SPECIES 1 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000177700 ENSGT01030000234576.D.a.a.b.a.a.a.a.b ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Gilthead seabream MODERN SPECIES 6 ENSSAUG00010017073 ENSSAUG00010017075 ENSSAUG00010017079 ENSSAUG00010017082 mrps5 (ENSSAUG00010017084) slc8a1b (ENSSAUG00010017113) ENSSAUG00010018070 MAP4K3 (ENSSAUG00010018108) ENSSAUG00010018537 slc17a5 (ENSSAUG00010018543) EEF1A1 (ENSSAUG00010018560) CGAS (ENSSAUG00010018571) ddx43 (ENSSAUG00010018572) KCNQ5 (ENSSAUG00010018578) cnrip1b (ENSSAUG00010019175) dnaaf10 (ENSSAUG00010019181) ##22 pno1 (ENSSAUG00010019182) c1d (ENSSAUG00010019188) ENSSAUG00010019192 meis1b (ENSSAUG00010019201) SPRED2 (ENSSAUG00010019238) ACTR2 (ENSSAUG00010019253) ENSSAUG00010019554 ENSSAUG00010019557 ENSSAUG00010019559 ENSSAUG00010001554 ENSSAUG00010001562 lgalslb (ENSSAUG00010001580) ENSSAUG00010001623 peli1b (ENSSAUG00010001780) ugp2b (ENSSAUG00010001888) Eupercaria_incertae_sedis ANCESTRAL SPECIES 1 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000177700 ENSGT01030000234576.D.a.a.b.a.a.a.a.b ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Large yellow croaker MODERN SPECIES 2 rbm17 (ENSLCRG00005004360) ENSLCRG00005004358 ENSLCRG00005004356 fbxo18 (ENSLCRG00005004352) ENSLCRG00005004339 MAP4K3 (ENSLCRG00005004240) ENSLCRG00005004228 slc17a5 (ENSLCRG00005004152) EEF1A1 (ENSLCRG00005004079) ENSLCRG00005004073 ddx43 (ENSLCRG00005004026) KCNQ5 (ENSLCRG00005003543) cnrip1b (ENSLCRG00005003531) ppp3r1a (ENSLCRG00005003511) pno1 (ENSLCRG00005003507) dnaaf10 (ENSLCRG00005003504) ##22 c1d (ENSLCRG00005003503) ENSLCRG00005003502 meis1b (ENSLCRG00005000371) SPRED2 (ENSLCRG00005000227) ACTR2 (ENSLCRG00005000189) ENSLCRG00005000165 ENSLCRG00005000141 ENSLCRG00005000106 lgalslb (ENSLCRG00005018532) ENSLCRG00005018527 peli1b (ENSLCRG00005018506) ENSLCRG00005018039 GFRA1 (ENSLCRG00005018019) ENSLCRG00005018018 si:ch1073-126c3.2 (ENSLCRG00005018017) Perciformes ANCESTRAL SPECIES 17 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a.h ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT01030000235205 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 Cottioidei ANCESTRAL SPECIES 17 ENSGT00940000154987.i.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.ab ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a.h ENSGT00940000154556.a.b ENSGT01030000234576.D.a.a.b.a.a.a.a.b ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Lumpfish MODERN SPECIES 6 MAL (ENSCLMG00005002396) mrps5 (ENSCLMG00005002398) slc8a1b (ENSCLMG00005002404) ENSCLMG00005002444 ENSCLMG00005002478 slc17a5 (ENSCLMG00005008183) ENSCLMG00005008931 ENSCLMG00005009225 ENSCLMG00005009226 ENSCLMG00005009227 ddx43 (ENSCLMG00005009228) ENSCLMG00005009230 cnrip1b (ENSCLMG00005009450) ENSCLMG00005009451 pno1 (ENSCLMG00005009452) dnaaf10 (ENSCLMG00005009463) ##22 c1d (ENSCLMG00005009465) ENSCLMG00005009466 ENSCLMG00005009467 SPRED2 (ENSCLMG00005009468) ACTR2 (ENSCLMG00005009470) ENSCLMG00005009540 ENSCLMG00005009542 lgalslb (ENSCLMG00005009545) ENSCLMG00005009551 peli1b (ENSCLMG00005009602) ENSCLMG00005009603 ugp2b (ENSCLMG00005009607) MDH1 (ENSCLMG00005009623) ENSCLMG00005009634 otx1 (ENSCLMG00005009635) Stickleback MODERN SPECIES 6 entpd6 (ENSGACG00000012144) vsx1 (ENSGACG00000012138) ENSGACG00000012136 ENSGACG00000012132 ENSGACG00000012134 ENSGACG00000012126 MAP4K3 (ENSGACG00000012107) ENSGACG00000012105 ENSGACG00000012101 ENSGACG00000012095 slc17a5 (ENSGACG00000012086) ddx43 (ENSGACG00000012072) ENSGACG00000012068 cnrip1b (ENSGACG00000012052) pno1 (ENSGACG00000012047) dnaaf10 (ENSGACG00000011988) ##22 c1d (ENSGACG00000011981) ENSGACG00000011978 b3gnt2b (ENSGACG00000011971) ENSGACG00000011956 ciao2b (ENSGACG00000011953) ENSGACG00000011946 GPR155 (ENSGACG00000011939) tmem41ab (ENSGACG00000011933) ENSGACG00000011928 ENSGACG00000011926 mtx2 (ENSGACG00000011909) ENSGACG00000011907 ENSGACG00000011902 ENSGACG00000011901 chrna1 (ENSGACG00000011894) Perciformes_a ANCESTRAL SPECIES 16 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT01030000237580 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT01030000235154 ENSGT00940000156327.l ENSGT00940000156841.a.a.h ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT01030000235205 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 Pike perch MODERN SPECIES 30 ENSSLUG00000010762 ENSSLUG00000010750 malb (ENSSLUG00000010745) mrps5 (ENSSLUG00000010736) slc8a1b (ENSSLUG00000010691) ENSSLUG00000010676 MAP4K3 (ENSSLUG00000009726) slc17a5 (ENSSLUG00000008576) eef1a1b (ENSSLUG00000008428) CGAS (ENSSLUG00000008418) ddx43 (ENSSLUG00000008401) KCNQ5 (ENSSLUG00000008175) cnrip1b (ENSSLUG00000008160) sult6b1 (ENSSLUG00000008118) pno1 (ENSSLUG00000008114) dnaaf10 (ENSSLUG00000008055) ##22 c1d (ENSSLUG00000008045) ENSSLUG00000008032 meis1b (ENSSLUG00000007585) SPRED2 (ENSSLUG00000007558) ACTR2 (ENSSLUG00000007306) ENSSLUG00000007287 ENSSLUG00000007277 ENSSLUG00000007269 ENSSLUG00000007265 ENSSLUG00000007259 lgalslb (ENSSLUG00000007241) ENSSLUG00000007184 peli1b (ENSSLUG00000007153) ugp2b (ENSSLUG00000005472) mdh1aa (ENSSLUG00000018360) Channel bull blenny MODERN SPECIES 6 ENSCGOG00000008748 malb (ENSCGOG00000008750) mrps5 (ENSCGOG00000008752) slc8a1b (ENSCGOG00000008760) ENSCGOG00000008776 MAP4K3 (ENSCGOG00000008956) ENSCGOG00000013110 slc17a5 (ENSCGOG00000013126) EEF1A1 (ENSCGOG00000013428) CGAS (ENSCGOG00000014721) ddx43 (ENSCGOG00000014781) KCNQ5 (ENSCGOG00000014877) cnrip1b (ENSCGOG00000014921) ppp3r1a (ENSCGOG00000014926) pno1 (ENSCGOG00000014929) dnaaf10 (ENSCGOG00000014955) ##22 c1d (ENSCGOG00000014962) meis1b (ENSCGOG00000014989) SPRED2 (ENSCGOG00000017236) ACTR2 (ENSCGOG00000017247) ENSCGOG00000017511 ENSCGOG00000017515 ENSCGOG00000017517 ENSCGOG00000017519 lgalslb (ENSCGOG00000017523) ENSCGOG00000017525 peli1b (ENSCGOG00000017558) ENSCGOG00000017565 MDH1 (ENSCGOG00000017586) WDPCP (ENSCGOG00000018045) otx1 (ENSCGOG00000018063) Percomorphaceae_D ANCESTRAL SPECIES 19 ENSGT00390000007701 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT01030000237580 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Carangaria ANCESTRAL SPECIES 19 ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00950000183029.B.j.c.a ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000166594 ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 Pleuronectoidei ANCESTRAL SPECIES 60 ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT01030000237580 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00950000183029.B.j.c.a ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000166594 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Turbot MODERN SPECIES 6 nphp1 (ENSSMAG00000019664) ENSSMAG00000019652 malb (ENSSMAG00000022037) mrps5 (ENSSMAG00000019624) slc8a1b (ENSSMAG00000019611) ENSSMAG00000019604 ENSSMAG00000019378 ENSSMAG00000030081 slc17a5 (ENSSMAG00000019352) EEF1A1 (ENSSMAG00000019345) CGAS (ENSSMAG00000019315) ddx43 (ENSSMAG00000019288) KCNQ5 (ENSSMAG00000019274) cnrip1b (ENSSMAG00000019273) pno1 (ENSSMAG00000019252) dnaaf10 (ENSSMAG00000019245) ##22 C1D (ENSSMAG00000036865) ENSSMAG00000019217 MEIS1 (ENSSMAG00000019196) SPRED2 (ENSSMAG00000019178) actr2b (ENSSMAG00000019164) ENSSMAG00000032537 ctu2 (ENSSMAG00000019141) PIEZO1 (ENSSMAG00000019053) CDT1 (ENSSMAG00000019002) aprt (ENSSMAG00000018985) ENSSMAG00000018949 ENSSMAG00000018945 nvl (ENSSMAG00000018904) degs1 (ENSSMAG00000018894) fbxo28 (ENSSMAG00000018869) Tongue sole MODERN SPECIES 3 zgc:65997 (ENSCSEG00000000455) nphp1 (ENSCSEG00000000462) MAL (ENSCSEG00000000488) ENSCSEG00000000491 mrps5 (ENSCSEG00000000495) slc8a1b (ENSCSEG00000000505) ENSCSEG00000000512 MAP4K3 (ENSCSEG00000000516) cnrip1b (ENSCSEG00000000521) KCNQ5 (ENSCSEG00000000525) ddx43 (ENSCSEG00000000532) eef1a1b (ENSCSEG00000000544) slc17a5 (ENSCSEG00000000550) ppp3r1a (ENSCSEG00000000556) pno1 (ENSCSEG00000000565) dnaaf10 (ENSCSEG00000000577) ##22 c1d (ENSCSEG00000000587) ENSCSEG00000000595 ENSCSEG00000000598 ENSCSEG00000000604 mcfd2 (ENSCSEG00000000605) TTC7A (ENSCSEG00000000610) si:ch211-93n23.7 (ENSCSEG00000000630) calm2a (ENSCSEG00000000634) ENSCSEG00000000644 ENSCSEG00000000657 ENSCSEG00000000663 PLEKHH2 (ENSCSEG00000000676) epcam (ENSCSEG00000000708) THADA (ENSCSEG00000000718) ENSCSEG00000000734 Carangaria_A ANCESTRAL SPECIES 25 ENSGT00940000165449 ENSGT00390000007701 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000166594 ENSGT01030000235205 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Barramundi perch MODERN SPECIES 33 slc8a1b (ENSLCAG00010014445) ENSLCAG00010014439 MAP4K3 (ENSLCAG00010014415) ENSLCAG00010014405 slc17a5 (ENSLCAG00010014365) EEF1A1 (ENSLCAG00010014256) ENSLCAG00010014227 ddx43 (ENSLCAG00010014225) KCNQ5 (ENSLCAG00010014113) cnrip1b (ENSLCAG00010014096) ppp3r1a (ENSLCAG00010014087) pno1 (ENSLCAG00010014077) dnaaf10 (ENSLCAG00010014068) ##22 c1d (ENSLCAG00010014064) ENSLCAG00010014062 meis1b (ENSLCAG00010013649) SPRED2 (ENSLCAG00010013603) ACTR2 (ENSLCAG00010013559) ENSLCAG00010013537 ENSLCAG00010013530 ENSLCAG00010013527 lgalslb (ENSLCAG00010013522) ENSLCAG00010013511 peli1b (ENSLCAG00010013496) ugp2b (ENSLCAG00010013444) mdh1aa (ENSLCAG00010013412) WDPCP (ENSLCAG00010013399) otx1 (ENSLCAG00010013390) Seriola ANCESTRAL SPECIES 17 ENSGT00940000165449 ENSGT00390000007701 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT01100000263491.a.a.c.b ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 Greater amberjack MODERN SPECIES 72 MAL (ENSSDUG00000019705) malb (ENSSDUG00000019726) mrps5 (ENSSDUG00000019792) slc8a1b (ENSSDUG00000019868) ENSSDUG00000019898 MAP4K3 (ENSSDUG00000019925) slc17a5 (ENSSDUG00000020030) EEF1A1 (ENSSDUG00000020050) ENSSDUG00000020072 CGAS (ENSSDUG00000020107) ddx43 (ENSSDUG00000020120) KCNQ5 (ENSSDUG00000020143) cnrip1b (ENSSDUG00000020172) ppp3r1a (ENSSDUG00000020180) pno1 (ENSSDUG00000020189) dnaaf10 (ENSSDUG00000020203) ##22 c1d (ENSSDUG00000020213) ENSSDUG00000020231 meis1b (ENSSDUG00000020244) SPRED2 (ENSSDUG00000020295) ACTR2 (ENSSDUG00000020311) ENSSDUG00000020338 ENSSDUG00000020354 ENSSDUG00000020365 ENSSDUG00000020372 lgalslb (ENSSDUG00000020375) ENSSDUG00000020392 ENSSDUG00000020421 ugp2b (ENSSDUG00000020436) ENSSDUG00000020458 mdh1aa (ENSSDUG00000020483) Yellowtail amberjack MODERN SPECIES 2948 zgc:65997 (ENSSLDG00000016643) nphp1 (ENSSLDG00000016665) ENSSLDG00000016695 malb (ENSSLDG00000016707) mrps5 (ENSSLDG00000016726) slc8a1b (ENSSLDG00000016760) ENSSLDG00000016788 MAP4K3 (ENSSLDG00000016855) slc17a5 (ENSSLDG00000017146) EEF1A1 (ENSSLDG00000017189) ddx43 (ENSSLDG00000017225) KCNQ5 (ENSSLDG00000017263) cnrip1b (ENSSLDG00000017291) ppp3r1a (ENSSLDG00000017313) pno1 (ENSSLDG00000017330) dnaaf10 (ENSSLDG00000017358) ##22 c1d (ENSSLDG00000017371) ENSSLDG00000017390 meis1b (ENSSLDG00000017406) SPRED2 (ENSSLDG00000017425) ACTR2 (ENSSLDG00000017448) ENSSLDG00000017479 ENSSLDG00000017491 ENSSLDG00000017510 lgalslb (ENSSLDG00000017531) ENSSLDG00000017547 peli1b (ENSSLDG00000017579) ugp2b (ENSSLDG00000017597) ENSSLDG00000017626 ENSSLDG00000017640 mdh1aa (ENSSLDG00000017660) Anabantaria ANCESTRAL SPECIES 17 ENSGT00390000007701 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT01030000237580 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Zig-zag eel MODERN SPECIES 6 ENSMAMG00000022049 zgc:65997 (ENSMAMG00000022058) nphp1 (ENSMAMG00000022063) ENSMAMG00000022068 malb (ENSMAMG00000022072) mrps5 (ENSMAMG00000022074) slc8a1b (ENSMAMG00000022080) ENSMAMG00000022090 ENSMAMG00000022108 slc17a5 (ENSMAMG00000022121) EEF1A1 (ENSMAMG00000004552) CGAS (ENSMAMG00000022124) ddx43 (ENSMAMG00000022128) KCNQ5 (ENSMAMG00000022134) ENSMAMG00000022136 DNAAF10 (ENSMAMG00000022141) ##22 pno1 (ENSMAMG00000022144) C1D (ENSMAMG00000022156) ENSMAMG00000022164 MEIS1 (ENSMAMG00000022171) SPRED2 (ENSMAMG00000025530) actr2b (ENSMAMG00000022188) AFTPH (ENSMAMG00000022192) LGALSL (ENSMAMG00000022198) ENSMAMG00000022200 peli1b (ENSMAMG00000022208) ugp2b (ENSMAMG00000022214) MDH1 (ENSMAMG00000022218) WDPCP (ENSMAMG00000022221) otx1 (ENSMAMG00000022224) EHBP1 (ENSMAMG00000022226) Anabantoidei ANCESTRAL SPECIES 17 ENSGT00390000007701 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT01030000237580 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Climbing perch MODERN SPECIES 6 ENSATEG00000012217 ENSATEG00000026083 malb (ENSATEG00000012241) mrps5 (ENSATEG00000012264) slc8a1b (ENSATEG00000012293) ENSATEG00000028108 ENSATEG00000027204 ENSATEG00000012370 ENSATEG00000012559 slc17a5 (ENSATEG00000012575) EEF1A1 (ENSATEG00000012623) CGAS (ENSATEG00000012654) ddx43 (ENSATEG00000012664) KCNQ5 (ENSATEG00000012797) ENSATEG00000027106 DNAAF10 (ENSATEG00000012915) ##22 pno1 (ENSATEG00000012887) C1D (ENSATEG00000012922) ENSATEG00000012939 MEIS1 (ENSATEG00000012952) SPRED2 (ENSATEG00000013004) ACTR2 (ENSATEG00000013034) ENSATEG00000028886 ENSATEG00000013084 LGALSL (ENSATEG00000027905) ENSATEG00000013162 peli1b (ENSATEG00000013249) ugp2b (ENSATEG00000013298) MDH1 (ENSATEG00000013346) WDPCP (ENSATEG00000013390) otx1 (ENSATEG00000013437) Siamese fighting fish MODERN SPECIES 6 malb (ENSBSLG00000013171) mrps5 (ENSBSLG00000013218) slc8a1b (ENSBSLG00000013391) ENSBSLG00000014213 MAP4K3 (ENSBSLG00000014437) ENSBSLG00000015485 slc17a5 (ENSBSLG00000015518) ddx43 (ENSBSLG00000015799) EEF1A1 (ENSBSLG00000015871) ENSBSLG00000015916 ENSBSLG00000016785 cnrip1b (ENSBSLG00000017289) ENSBSLG00000017307 ppp3r1a (ENSBSLG00000017314) pno1 (ENSBSLG00000017358) dnaaf10 (ENSBSLG00000017449) ##22 c1d (ENSBSLG00000017549) ENSBSLG00000017560 meis1b (ENSBSLG00000017627) SPRED2 (ENSBSLG00000018342) actr2a (ENSBSLG00000018376) ENSBSLG00000018593 lgalslb (ENSBSLG00000018607) ENSBSLG00000018627 peli1b (ENSBSLG00000018653) ugp2b (ENSBSLG00000018667) MDH1 (ENSBSLG00000019042) WDPCP (ENSBSLG00000019147) otx1 (ENSBSLG00000019164) EHBP1 (ENSBSLG00000019193) b3gnt2b (ENSBSLG00000019315) Ovalentaria ANCESTRAL SPECIES 18 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Ovalentaria_B ANCESTRAL SPECIES 7 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Cichlidae ANCESTRAL SPECIES 13 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Midas cichlid MODERN SPECIES 230 ENSACIG00000011449 malb (ENSACIG00000011521) mrps5 (ENSACIG00000011594) slc8a1b (ENSACIG00000011645) ENSACIG00000011677 MAP4K3 (ENSACIG00000011728) slc17a5 (ENSACIG00000011825) ENSACIG00000011849 EEF1A1 (ENSACIG00000011859) CGAS (ENSACIG00000011886) ddx43 (ENSACIG00000012170) KCNQ5 (ENSACIG00000012311) cnrip1b (ENSACIG00000012353) ppp3r1a (ENSACIG00000012385) pno1 (ENSACIG00000012543) dnaaf10 (ENSACIG00000012570) ##22 c1d (ENSACIG00000012684) ENSACIG00000012728 meis1b (ENSACIG00000012745) SPRED2 (ENSACIG00000012773) actr2a (ENSACIG00000012799) ENSACIG00000012820 lgalslb (ENSACIG00000012830) ENSACIG00000012854 peli1b (ENSACIG00000012890) ugp2b (ENSACIG00000012903) MDH1 (ENSACIG00000012929) WDPCP (ENSACIG00000012952) otx1 (ENSACIG00000012995) EHBP1 (ENSACIG00000013008) b3gnt2b (ENSACIG00000013061) Pseudocrenilabrinae ANCESTRAL SPECIES 16 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Pseudocrenilabrinae_A ANCESTRAL SPECIES 11 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Haplochromini ANCESTRAL SPECIES 10 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Haplochromini_A ANCESTRAL SPECIES 8 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q P. nyererei MODERN SPECIES 349 nphp1 (ENSPNYG00000009923) ENSPNYG00000009894 malb (ENSPNYG00000009877) mrps5 (ENSPNYG00000009861) slc8a1b (ENSPNYG00000009830) ENSPNYG00000009804 MAP4K3 (ENSPNYG00000009592) slc17a5 (ENSPNYG00000009447) EEF1A1 (ENSPNYG00000009404) CGAS (ENSPNYG00000009164) ddx43 (ENSPNYG00000009064) KCNQ5 (ENSPNYG00000009016) cnrip1b (ENSPNYG00000008998) ppp3r1a (ENSPNYG00000008986) pno1 (ENSPNYG00000008942) dnaaf10 (ENSPNYG00000008828) ##22 c1d (ENSPNYG00000008789) ENSPNYG00000008771 ENSPNYG00000008745 meis1b (ENSPNYG00000008708) SPRED2 (ENSPNYG00000008682) actr2a (ENSPNYG00000008624) ENSPNYG00000008600 lgalslb (ENSPNYG00000008578) ENSPNYG00000008530 peli1b (ENSPNYG00000008495) ugp2b (ENSPNYG00000008441) MDH1 (ENSPNYG00000008390) ENSPNYG00000008363 otx1 (ENSPNYG00000008345) EHBP1 (ENSPNYG00000008205) Haplochromini_B ANCESTRAL SPECIES 5 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Zebra mbuna MODERN SPECIES 1095 ENSMZEG00005027359 SYNPO2L (ENSMZEG00005027358) MYOZ1 (ENSMZEG00005027357) hhat (ENSMZEG00005027356) slc8a1b (ENSMZEG00005027355) ENSMZEG00005027354 MAP4K3 (ENSMZEG00005027353) slc17a5 (ENSMZEG00005027352) EEF1A1 (ENSMZEG00005027351) CGAS (ENSMZEG00005027350) ddx43 (ENSMZEG00005027349) KCNQ5 (ENSMZEG00005027348) cnrip1b (ENSMZEG00005027347) ppp3r1a (ENSMZEG00005027346) pno1 (ENSMZEG00005027345) dnaaf10 (ENSMZEG00005027344) ##22 c1d (ENSMZEG00005027343) ENSMZEG00005027342 meis1b (ENSMZEG00005027341) SPRED2 (ENSMZEG00005027339) actr2a (ENSMZEG00005027338) ENSMZEG00005027337 lgalslb (ENSMZEG00005027336) ENSMZEG00005027335 peli1b (ENSMZEG00005027334) ugp2b (ENSMZEG00005027333) MDH1 (ENSMZEG00005027332) WDPCP (ENSMZEG00005027331) otx1 (ENSMZEG00005027330) ENSMZEG00005027329 EHBP1 (ENSMZEG00005027328) Eastern happy MODERN SPECIES 4 ENSACLG00000025741 malb (ENSACLG00000025748) mrps5 (ENSACLG00000025759) slc8a1b (ENSACLG00000025808) ENSACLG00000025840 MAP4K3 (ENSACLG00000025938) ENSACLG00000026002 slc17a5 (ENSACLG00000026026) EEF1A1 (ENSACLG00000026047) CGAS (ENSACLG00000026073) ddx43 (ENSACLG00000026081) KCNQ5 (ENSACLG00000026094) cnrip1b (ENSACLG00000026147) ppp3r1a (ENSACLG00000026154) pno1 (ENSACLG00000026167) dnaaf10 (ENSACLG00000026190) ##22 c1d (ENSACLG00000026206) ENSACLG00000026219 meis1b (ENSACLG00000026249) SPRED2 (ENSACLG00000026311) actr2a (ENSACLG00000026334) ENSACLG00000026357 lgalslb (ENSACLG00000026386) ENSACLG00000026411 peli1b (ENSACLG00000026494) ugp2b (ENSACLG00000026535) MDH1 (ENSACLG00000026557) WDPCP (ENSACLG00000026647) otx1 (ENSACLG00000026686) EHBP1 (ENSACLG00000026697) b3gnt2b (ENSACLG00000026781) Burton s mouthbrooder MODERN SPECIES 318 cnrip1b (ENSHBUG00000018590) ppp3r1a (ENSHBUG00000000555) pno1 (ENSHBUG00000018572) dnaaf10 (ENSHBUG00000018541) ##22 c1d (ENSHBUG00000018531) ENSHBUG00000018526 meis1b (ENSHBUG00000018510) SPRED2 (ENSHBUG00000018425) actr2a (ENSHBUG00000018399) ENSHBUG00000018375 ENSHBUG00000018356 lgalslb (ENSHBUG00000018349) ENSHBUG00000018319 peli1b (ENSHBUG00000018272) ugp2b (ENSHBUG00000018209) MDH1 (ENSHBUG00000001045) WDPCP (ENSHBUG00000018121) otx1 (ENSHBUG00000018104) EHBP1 (ENSHBUG00000018080) Lyretail cichlid MODERN SPECIES 295 nphp1 (ENSNBRG00000011708) ENSNBRG00000011676 malb (ENSNBRG00000011605) mrps5 (ENSNBRG00000011584) slc8a1b (ENSNBRG00000011545) ENSNBRG00000011526 MAP4K3 (ENSNBRG00000011204) slc17a5 (ENSNBRG00000011078) ENSNBRG00000011060 ENSNBRG00000011042 ddx43 (ENSNBRG00000010942) ENSNBRG00000010894 cnrip1b (ENSNBRG00000010873) ppp3r1a (ENSNBRG00000010865) pno1 (ENSNBRG00000010839) dnaaf10 (ENSNBRG00000010737) ##22 c1d (ENSNBRG00000010704) ENSNBRG00000010688 meis1b (ENSNBRG00000010657) SPRED2 (ENSNBRG00000010593) actr2a (ENSNBRG00000010551) ENSNBRG00000010532 lgalslb (ENSNBRG00000010508) ENSNBRG00000010455 peli1b (ENSNBRG00000010433) ugp2b (ENSNBRG00000010404) MDH1 (ENSNBRG00000010369) WDPCP (ENSNBRG00000010324) otx1 (ENSNBRG00000010309) EHBP1 (ENSNBRG00000010267) b3gnt2b (ENSNBRG00000010244) Nile tilapia MODERN SPECIES 4 malb (ENSONIG00000034164) mrps5 (ENSONIG00000001150) slc8a1b (ENSONIG00000001153) ENSONIG00000001165 MAP4K3 (ENSONIG00000001166) ENSONIG00000001180 slc17a5 (ENSONIG00000001181) EEF1A1 (ENSONIG00000041189) ddx43 (ENSONIG00000040886) EEF1A1 (ENSONIG00000035707) CGAS (ENSONIG00000040980) ddx43 (ENSONIG00000001195) KCNQ5 (ENSONIG00000001209) cnrip1b (ENSONIG00000001213) pno1 (ENSONIG00000001223) dnaaf10 (ENSONIG00000001214) ##22 c1d (ENSONIG00000001233) ENSONIG00000036908 meis1b (ENSONIG00000001236) SPRED2 (ENSONIG00000029966) actr2a (ENSONIG00000001245) ENSONIG00000039063 ENSONIG00000030341 lgalslb (ENSONIG00000001248) ENSONIG00000008025 ENSONIG00000032553 ENSONIG00000039754 ENSONIG00000004918 ENSONIG00000040742 ENSONIG00000039915 ENSONIG00000028845 Pomacentridae ANCESTRAL SPECIES 115 ENSGT00390000007701 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000164807.G.a.a.b ENSGT01030000235205 ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 2478 ppp3r1a (ENSSPAG00000012388) pno1 (ENSSPAG00000012360) dnaaf10 (ENSSPAG00000012341) ##22 Bicolor damselfish MODERN SPECIES 1156 dnaaf10 (ENSSPAG00000008589) ##22 c1d (ENSSPAG00000008574) ENSSPAG00000008559 Pomacentridae_A ANCESTRAL SPECIES 104 ENSGT00390000007701 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000155337.ab ENSGT00940000174754 ENSGT00950000183050.b.b.b.a.a.a.a Amphiprion ANCESTRAL SPECIES 128 ENSGT00390000007701 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000155337.ab ENSGT00940000174754 ENSGT00950000183050.b.b.b.a.a.a.a Orange clownfish MODERN SPECIES 12 malb (ENSAPEG00000000848) mrps5 (ENSAPEG00000000853) slc8a1b (ENSAPEG00000000914) ENSAPEG00000000981 ENSAPEG00000000987 ENSAPEG00000000993 slc17a5 (ENSAPEG00000001012) ENSAPEG00000001056 EEF1A1 (ENSAPEG00000001072) CGAS (ENSAPEG00000001118) ddx43 (ENSAPEG00000001133) KCNQ5 (ENSAPEG00000001262) cnrip1b (ENSAPEG00000001341) ppp3r1a (ENSAPEG00000001356) pno1 (ENSAPEG00000001366) dnaaf10 (ENSAPEG00000001394) ##22 c1d (ENSAPEG00000001403) ENSAPEG00000001417 meis1b (ENSAPEG00000001438) SPRED2 (ENSAPEG00000001488) actr2a (ENSAPEG00000001530) ENSAPEG00000001578 ENSAPEG00000001612 lgalslb (ENSAPEG00000001619) ENSAPEG00000001646 peli1b (ENSAPEG00000001720) ENSAPEG00000001743 ENSAPEG00000001773 mrpl57 (ENSAPEG00000001827) KCNH1 (ENSAPEG00000001838) hhat (ENSAPEG00000001904) Clown anemonefish MODERN SPECIES 1131 ENSAOCG00000020416 cnrip1b (ENSAOCG00000020405) ppp3r1a (ENSAOCG00000001506) pno1 (ENSAOCG00000020389) dnaaf10 (ENSAOCG00000001503) ##22 c1d (ENSAOCG00000020354) Spiny chromis MODERN SPECIES 465 ENSAPOG00000005379 cnrip1b (ENSAPOG00000005397) ppp3r1a (ENSAPOG00000005408) pno1 (ENSAPOG00000005420) dnaaf10 (ENSAPOG00000005430) ##22 c1d (ENSAPOG00000005466) ENSAPOG00000005477 kcnk13b (ENSAPOG00000005529) Atherinomorphae ANCESTRAL SPECIES 16 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000164807.G.a.a.b ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 Oryzias ANCESTRAL SPECIES 6 ENSGT00390000014082.a.a ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT01030000235154 ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000155337.ab ENSGT01100000263533.b.a.a.a ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Oryzias_b ANCESTRAL SPECIES 7 ENSGT00940000155921 ENSGT00940000158394.f ENSGT00390000014082.a.a ENSGT00940000160678.b ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00950000183091.A.b ##22 ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00940000161907 ENSGT00940000161552 ENSGT00940000156782.c ENSGT00720000108792.A ENSGT00940000162185 ENSGT00940000157051 ENSGT00940000165086.b ENSGT00940000155493 ENSGT00940000153430.a.b ENSGT01030000234641.a.b ENSGT00940000164222 ENSGT00730000111063 ENSGT00940000157425.B Javanese ricefish MODERN SPECIES 6 ENSOJAG00000015136 ENSOJAG00000015155 ENSOJAG00000015166 ENSOJAG00000015199 ENSOJAG00000015221 slc30a6 (ENSOJAG00000015258) sult6b1 (ENSOJAG00000015564) ENSOJAG00000015574 MAP4K3 (ENSOJAG00000015852) ENSOJAG00000018267 eef1a1b (ENSOJAG00000018399) ENSOJAG00000018490 ddx43 (ENSOJAG00000018507) KCNQ5 (ENSOJAG00000018681) cnrip1b (ENSOJAG00000018812) dnaaf10 (ENSOJAG00000018831) ##22 pno1 (ENSOJAG00000019001) ttl (ENSOJAG00000019060) fignl1 (ENSOJAG00000019074) ikzf1 (ENSOJAG00000019082) vwc2 (ENSOJAG00000019149) zgc:110045 (ENSOJAG00000019155) si:ch211-117n7.7 (ENSOJAG00000019281) tm9sf3 (ENSOJAG00000019377) prdx3 (ENSOJAG00000019576) sfxn4 (ENSOJAG00000019603) dennd10 (ENSOJAG00000019610) eif3s10 (ENSOJAG00000019632) emx2 (ENSOJAG00000019692) RAB11FIP2 (ENSOJAG00000019706) fam204a (ENSOJAG00000019712) Indian medaka MODERN SPECIES 27 adob (ENSOMEG00000001124) ENSOMEG00000023624 slc30a6 (ENSOMEG00000023610) sult6b1 (ENSOMEG00000023568) ENSOMEG00000023563 MAP4K3 (ENSOMEG00000023528) ENSOMEG00000023502 slc17a5 (ENSOMEG00000023471) eef1a1b (ENSOMEG00000023456) CGAS (ENSOMEG00000023427) ddx43 (ENSOMEG00000023418) KCNQ5 (ENSOMEG00000023390) cnrip1b (ENSOMEG00000023337) ppp3r1a (ENSOMEG00000023323) pno1 (ENSOMEG00000023300) dnaaf10 (ENSOMEG00000023287) ##22 ttl (ENSOMEG00000023276) fignl1 (ENSOMEG00000023258) ikzf1 (ENSOMEG00000023255) ENSOMEG00000023245 SPRED2 (ENSOMEG00000023237) actr2a (ENSOMEG00000023221) lgalslb (ENSOMEG00000023198) ENSOMEG00000023188 ENSOMEG00000023167 peli1b (ENSOMEG00000023127) ugp2b (ENSOMEG00000023112) MDH1 (ENSOMEG00000023091) WDPCP (ENSOMEG00000023058) otx1 (ENSOMEG00000023010) EHBP1 (ENSOMEG00000022982) Oryzias_a ANCESTRAL SPECIES 4 ENSGT00940000159934 ENSGT00940000159084 ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT00940000174058 ENSGT00950000183029.B.j.c.a ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT01030000235154 ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000155337.ab ENSGT01100000263533.b.a.a.a ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 ENSGT00940000155345.q Japanese Medaka HdrR MODERN SPECIES 6 ENSORLG00000027098 ENSORLG00000026999 slc30a6 (ENSORLG00000002108) sult6b1 (ENSORLG00000022898) ENSORLG00000002138 MAP4K3 (ENSORLG00000002196) ENSORLG00000026157 slc17a5 (ENSORLG00000002237) eef1a1a (ENSORLG00000002258) ENSORLG00000021960 ddx43 (ENSORLG00000002267) KCNQ5 (ENSORLG00000002279) cnrip1b (ENSORLG00000025748) ppp3r1a (ENSORLG00000002343) pno1 (ENSORLG00000002371) dnaaf10 (ENSORLG00000030098) ##22 c1d (ENSORLG00000021968) ENSORLG00000030003 ENSORLG00000026767 ENSORLG00000023223 meis1b (ENSORLG00000002411) SPRED2 (ENSORLG00000002435) actr2a (ENSORLG00000002451) lgalslb (ENSORLG00000028938) ENSORLG00000022965 ENSORLG00000027511 peli1b (ENSORLG00000002477) ugp2b (ENSORLG00000002512) mdh1ab (ENSORLG00000002524) WDPCP (ENSORLG00000029431) otx1 (ENSORLG00000028142) Chinese medaka MODERN SPECIES 794 adob (ENSOSIG00000015658) ENSOSIG00000015655 slc30a6 (ENSOSIG00000014727) sult6b1 (ENSOSIG00000014710) ENSOSIG00000014709 MAP4K3 (ENSOSIG00000009685) ENSOSIG00000009628 slc17a5 (ENSOSIG00000009625) eef1a1a (ENSOSIG00000009623) ENSOSIG00000009621 ddx43 (ENSOSIG00000009443) ENSOSIG00000009435 cnrip1b (ENSOSIG00000009432) ppp3r1a (ENSOSIG00000009392) pno1 (ENSOSIG00000009390) dnaaf10 (ENSOSIG00000009388) ##22 c1d (ENSOSIG00000009385) ENSOSIG00000009381 ENSOSIG00000009379 SPRED2 (ENSOSIG00000009377) actr2a (ENSOSIG00000009372) LGALSL (ENSOSIG00000009371) ENSOSIG00000009349 peli1b (ENSOSIG00000009346) ENSOSIG00000009345 MDH1 (ENSOSIG00000009213) WDPCP (ENSOSIG00000009212) otx1 (ENSOSIG00000009211) EHBP1 (ENSOSIG00000009187) b3gnt2b (ENSOSIG00000009174) Cyprinodontiformes ANCESTRAL SPECIES 17 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Aplocheiloidei ANCESTRAL SPECIES 22 ENSGT01050000244864.C.f ENSGT00940000157784.d ENSGT00940000156598.c.a ENSGT00390000010738 ENSGT00550000074922 ENSGT00390000005826.a.b.h.a ENSGT00940000155428.b ENSGT00390000001607 ENSGT01090000260080.a ENSGT00940000153691.a.a ENSGT00940000156851.d ENSGT00390000001859.f ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000177700 ENSGT01100000263533.b.a.a.a.d.b ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 ENSGT00940000157597 Turquoise killifish MODERN SPECIES 1612 ENSNFUG00015009843 ENSNFUG00015009834 ENSNFUG00015009797 ENSNFUG00015009790 ENSNFUG00015009783 ENSNFUG00015009778 cdh11 (ENSNFUG00015009107) ENSNFUG00015008958 ENSNFUG00015008948 CHRNA1 (ENSNFUG00015024488) LNPB (ENSNFUG00015024477) CNRIP1B (ENSNFUG00015024470) ppp3r1a (ENSNFUG00015024460) ENSNFUG00015024455 pno1 (ENSNFUG00015024451) dnaaf10 (ENSNFUG00015024444) ##22 c1d (ENSNFUG00015024438) ENSNFUG00015024436 ENSNFUG00015024428 ETAA1 (ENSNFUG00015024421) meis1b (ENSNFUG00015024373) ENSNFUG00015024358 ENSNFUG00015024354 SPRED2A (ENSNFUG00015024353) ACTR2 (ENSNFUG00015024344) AFTPHA (ENSNFUG00015024338) ENSNFUG00015024333 lgalslb (ENSNFUG00015024326) ENSNFUG00015024317 PELI1B (ENSNFUG00015024315) ugp2b (ENSNFUG00015024190) Mangrove rivulus MODERN SPECIES 260 ENSKMAG00000017874 tncb (ENSKMAG00000017902) ENSKMAG00000017953 ENSKMAG00000017959 ENSKMAG00000017973 ENSKMAG00000017989 npr3 (ENSKMAG00000018012) ENSKMAG00000018030 chrna1 (ENSKMAG00000018050) ENSKMAG00000018102 cnrip1b (ENSKMAG00000018126) ppp3r1a (ENSKMAG00000018138) pno1 (ENSKMAG00000018156) dnaaf10 (ENSKMAG00000018178) ##22 ENSKMAG00000018194 EML4 (ENSKMAG00000018281) Cyprinodontoidei ANCESTRAL SPECIES 14 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000164807.G.a.a.b ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 Poeciliinae ANCESTRAL SPECIES 16 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l.q ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000164807.G.a.a.b ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 Poecilia ANCESTRAL SPECIES 11 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291.d ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l.q ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000164807.G.a.a.b ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 ENSGT00940000161234 NAME_6 ANCESTRAL SPECIES 174 ENSGT00940000154987.i.a ENSGT00940000154987.i.b.a.a ENSGT00390000001878 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291.d ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00660000097267 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l.r Sailfin molly MODERN SPECIES 1797 cnrip1b (ENSPLAG00000017666) ppp3r1a (ENSPLAG00000017670) pno1 (ENSPLAG00000017687) ENSPLAG00000017701 dnaaf10 (ENSPLAG00000017711) ##22 Guppy MODERN SPECIES 445 ENSPREG00000001842 malb (ENSPREG00000001744) mrps5 (ENSPREG00000001722) slc8a1b (ENSPREG00000001659) ENSPREG00000001603 MAP4K3 (ENSPREG00000001518) ENSPREG00000001493 slc17a5 (ENSPREG00000001453) EEF1A1 (ENSPREG00000001416) CGAS (ENSPREG00000001034) ddx43 (ENSPREG00000000923) KCNQ5 (ENSPREG00000000873) cnrip1b (ENSPREG00000000842) ppp3r1a (ENSPREG00000000832) pno1 (ENSPREG00000000793) dnaaf10 (ENSPREG00000000779) ##22 c1d (ENSPREG00000000742) ENSPREG00000000726 meis1b (ENSPREG00000000691) SPRED2 (ENSPREG00000000651) actr2a (ENSPREG00000000566) ENSPREG00000021487 ENSPREG00000021483 lgalslb (ENSPREG00000021476) ENSPREG00000021444 peli1b (ENSPREG00000021412) ugp2b (ENSPREG00000021393) MDH1 (ENSPREG00000021368) WDPCP (ENSPREG00000021349) otx1 (ENSPREG00000021337) EHBP1 (ENSPREG00000021321) Platyfish MODERN SPECIES 14 malb (ENSXMAG00000023290) mrps5 (ENSXMAG00000028833) slc8a1b (ENSXMAG00000017251) ENSXMAG00000017249 MAP4K3 (ENSXMAG00000017170) ENSXMAG00000017168 ENSXMAG00000026195 slc17a5 (ENSXMAG00000017162) EEF1A1 (ENSXMAG00000017149) CGAS (ENSXMAG00000028055) ddx43 (ENSXMAG00000017126) KCNQ5 (ENSXMAG00000024491) cnrip1b (ENSXMAG00000024487) ppp3r1a (ENSXMAG00000022836) pno1 (ENSXMAG00000021459) dnaaf10 (ENSXMAG00000029168) ##22 c1d (ENSXMAG00000022273) ENSXMAG00000027599 meis1b (ENSXMAG00000011739) ENSXMAG00000029931 SPRED2 (ENSXMAG00000011804) actr2a (ENSXMAG00000011813) ENSXMAG00000029191 ENSXMAG00000025365 ENSXMAG00000029735 lgalslb (ENSXMAG00000011845) peli1b (ENSXMAG00000022686) ENSXMAG00000027229 ugp2b (ENSXMAG00000005551) MDH1 (ENSXMAG00000005571) WDPCP (ENSXMAG00000005591) NAME_4 ANCESTRAL SPECIES 132 ENSGT00940000155129.A ENSGT00530000063557.b ENSGT00940000155483.f ENSGT00940000163420 ENSGT00940000166291 ENSGT00950000183029.B.j.c.b ENSGT01050000244827.E ENSGT00940000163653 ENSGT00940000155933.b.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000154186.a.q ENSGT00940000177700 ENSGT00940000164807.G.a.a.b ENSGT01100000263533.b.a.a.a ENSGT00940000155337.ab ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.q.a ENSGT00390000016551 Mummichog MODERN SPECIES 2306 cnrip1b (ENSFHEG00000010430) ppp3r1a (ENSFHEG00000010442) pno1 (ENSFHEG00000010487) dnaaf10 (ENSFHEG00000010502) ##22 c1d (ENSFHEG00000010545) ENSFHEG00000010566 meis1b (ENSFHEG00000010659) SPRED2 (ENSFHEG00000000242) ENSFHEG00000010786 actr2a (ENSFHEG00000010852) ENSFHEG00000010863 ENSFHEG00000010874 ENSFHEG00000010883 ENSFHEG00000010885 lgalslb (ENSFHEG00000010890) ENSFHEG00000010952 peli1b (ENSFHEG00000011027) ugp2b (ENSFHEG00000011098) MDH1 (ENSFHEG00000011156) Sheepshead minnow MODERN SPECIES 938 ENSCVAG00000009866 slc17a5 (ENSCVAG00000009898) EEF1A1 (ENSCVAG00000009938) CGAS (ENSCVAG00000009949) ddx43 (ENSCVAG00000009980) KCNQ5 (ENSCVAG00000010093) cnrip1b (ENSCVAG00000010110) ppp3r1a (ENSCVAG00000010117) pno1 (ENSCVAG00000010136) dnaaf10 (ENSCVAG00000010143) ##22 Tiger tail seahorse MODERN SPECIES 363 ENSHCOG00000015117 peli1b (ENSHCOG00000015073) ugp2b (ENSHCOG00000015044) mdh1aa (ENSHCOG00000015008) WDPCP (ENSHCOG00000000697) otx1 (ENSHCOG00000014924) EHBP1 (ENSHCOG00000014911) b3gnt2b (ENSHCOG00000014754) slc17a5 (ENSHCOG00000014744) eef1a1b (ENSHCOG00000014718) ddx43 (ENSHCOG00000014704) KCNQ5 (ENSHCOG00000014664) cnrip1b (ENSHCOG00000000405) ENSHCOG00000014627 pno1 (ENSHCOG00000014618) dnaaf10 (ENSHCOG00000014596) ##22 c1d (ENSHCOG00000014589) c1d (ENSHCOG00000014568) meis1b (ENSHCOG00000014553) SPRED2 (ENSHCOG00000014521) actr2a (ENSHCOG00000014491) SLC16A12 (ENSHCOG00000014460) pank1a (ENSHCOG00000014434) zgc:65997 (ENSHCOG00000014407) nphp1 (ENSHCOG00000014383) ENSHCOG00000014212 malb (ENSHCOG00000014207) mrps5 (ENSHCOG00000014200) slc8a1b (ENSHCOG00000014155) ENSHCOG00000014128 Pinecone sodierfish MODERN SPECIES 6 znhit2 (ENSMMDG00005008808) ppm1ba (ENSMMDG00005008805) SLC3A1 (ENSMMDG00005008796) prepl (ENSMMDG00005008758) CAMKMT (ENSMMDG00005008750) six3a (ENSMMDG00005008748) six2a (ENSMMDG00005008747) SRBD1 (ENSMMDG00005007351) slc17a5 (ENSMMDG00005006581) EEF1A1 (ENSMMDG00005006490) CGAS (ENSMMDG00005006487) ddx43 (ENSMMDG00005006480) KCNQ5 (ENSMMDG00005005265) cnrip1b (ENSMMDG00005005245) pno1 (ENSMMDG00005005242) dnaaf10 (ENSMMDG00005005183) ##22 c1d (ENSMMDG00005005173) ENSMMDG00005005164 meis1b (ENSMMDG00005005050) SPRED2 (ENSMMDG00005005012) ACTR2 (ENSMMDG00005004705) ENSMMDG00005004671 ENSMMDG00005004660 lgalslb (ENSMMDG00005004651) ENSMMDG00005004598 peli1b (ENSMMDG00005004574) ugp2b (ENSMMDG00005002214) MDH1 (ENSMMDG00005002128) WDPCP (ENSMMDG00005002107) otx1 (ENSMMDG00005002103) ENSMMDG00005002101 Cod MODERN SPECIES 6 slc17a5 (ENSGMOG00000004216) ENSGMOG00000002157 ENSGMOG00000032898 ENSGMOG00000016152 KCNG3 (ENSGMOG00000036198) COX7A2L (ENSGMOG00000010003) ENSGMOG00000029774 EML4 (ENSGMOG00000009981) pkdcca (ENSGMOG00000002754) prph2b (ENSGMOG00000002745) ENSGMOG00000031532 ENSGMOG00000000833 ACSS1 (ENSGMOG00000017472) ENSGMOG00000034012 ENTPD6 (ENSGMOG00000002346) DNAAF10 (ENSGMOG00000026435) ##22 PNO1 (ENSGMOG00000001448) C1D (ENSGMOG00000013911) ENSGMOG00000025603 SPRED2 (ENSGMOG00000032899) ENSGMOG00000006487 ENSGMOG00000020233 ENSGMOG00000006493 ENSGMOG00000006569 ENSGMOG00000006578 ENSGMOG00000006605 ZFAND4 (ENSGMOG00000006650) marchf8 (ENSGMOG00000006671) alox5a (ENSGMOG00000006677) ENSGMOG00000029870 eif4e1c (ENSGMOG00000006731) Protacanthopterygii ANCESTRAL SPECIES 4 ENSGT00390000008798.d.b ENSGT00390000009877 ENSGT00940000156543 ENSGT00940000157912 ENSGT00390000002164.a ENSGT00390000018525.a.a ENSGT00940000155989.e ENSGT01010000222287.B.a.a.a.a.a.a ENSGT00940000165449 ENSGT00940000157373.l ENSGT00390000007551 ENSGT00940000154445.a ENSGT00390000004284.e ENSGT00940000156530.c.ab ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000157509.a.f ENSGT00940000156327.l.o ENSGT00940000156841.a.a ENSGT00940000154556.a.b ENSGT00940000156467 ENSGT00940000158732 ENSGT00390000016883 ENSGT00390000008178 ENSGT00940000153408.B.s.a.b ENSGT00940000157824.i.b ENSGT00940000155345.q ENSGT00940000157597 ENSGT00940000161234.c Salmoninae ANCESTRAL SPECIES 325 ENSGT00950000185438 ENSGT00940000155989.e.f ENSGT01010000222287.B.a.a.a.a.a.a.f ENSGT00940000165449 ENSGT00940000157373.l.e ENSGT00940000154445.a.d ENSGT00390000004284.e.e ENSGT00940000156530.c.ab.a ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405.pb ENSGT00940000155509.b.a.i ENSGT00940000159143.c.a ENSGT00940000156033.f.b ENSGT01090000260051.b.a.a.b.a.e ENSGT00940000154208.c.b.b ENSGT00940000163867.m ENSGT00940000165096.b.b.e ENSGT00940000156922.b.a.e ENSGT00940000164958.a.d.b ENSGT00940000157100.a.j ENSGT00940000164900 ENSGT00940000169412 ENSGT00940000165096.b.b.f ENSGT00940000156922.b.a.f Salmoninae_a ANCESTRAL SPECIES 17 ENSGT00390000014606 ENSGT00730000111092.g ENSGT00950000183079.B.j.a.a.a ENSGT00940000157528.g ENSGT00940000157851 ENSGT00390000008798.d.b.e ENSGT00390000009877 ENSGT00940000156543.c ENSGT00390000002164.a.c ENSGT00390000018525.a.a.r ENSGT00940000155989.e.f ENSGT01010000222287.B.a.a.a.a.a.a.f ENSGT00940000165449.i ENSGT00940000157373.l.e ENSGT00940000154445.a.d ENSGT00950000183091.A.b ##22 ENSGT00390000014320.c.b.d ENSGT00390000004284.e.e ENSGT00940000156530.c.ab.a ENSGT00390000018052 ENSGT00390000015405.pb ENSGT00940000155509.b.a.i ENSGT00940000159143.c.a ENSGT00940000156033.f.b ENSGT01090000260051.b.a.a.b.a.e ENSGT00940000154208.c.b.b ENSGT00940000163867.m ENSGT00940000165096.b.b.e ENSGT00940000156922.b.a.e ENSGT00940000164958.a.d.b ENSGT00940000157100.a.j Salmo ANCESTRAL SPECIES 3 ENSGT00950000183079.B.j.a.a.a ENSGT00940000157528.g ENSGT00940000157851 ENSGT00390000008798.d.b.e ENSGT00390000009877 ENSGT00940000156543.c ENSGT00390000002164.a.c ENSGT00390000018525.a.a.r ENSGT00940000155989.e.f ENSGT01010000222287.B.a.a.a.a.a.a.f ENSGT00940000165449.i ENSGT00940000157373.l.e ENSGT00940000154445.a.d ENSGT00390000014320.c.b.d ENSGT00390000004284.e.e ENSGT00950000183091.A.b ##22 ENSGT00390000018052 ENSGT00390000015405.pb ENSGT00940000155509.b.a.i ENSGT00940000159143.c.a ENSGT00940000156033.f.b ENSGT01090000260051.b.a.a.b.a.e ENSGT00940000154208.c.b.b ENSGT00940000163867.m ENSGT00940000165096.b.b.e ENSGT00940000156922.b.a.e ENSGT00940000164958.a.d.b ENSGT00940000157100.a.j ENSGT01100000263520.a.a.a.a.b.a.c.a.b.a.a ENSGT00940000154768.A.b.k.b ENSGT01050000244814.a.b.a.g Atlantic salmon MODERN SPECIES 10 OIT3 (ENSSSAG00000054635) pla2g12b (ENSSSAG00000040768) ENSSSAG00000087765 pde10a (ENSSSAG00000118189) ENSSSAG00000086110 ENSSSAG00000040706 sft2d1 (ENSSSAG00000054276) ENSSSAG00000078645 ENSSSAG00000085294 zgc:65997 (ENSSSAG00000054288) pank1a (ENSSSAG00000054291) cisd1 (ENSSSAG00000054306) ENSSSAG00000102484 ENSSSAG00000089836 ENSSSAG00000121949 ENSSSAG00000054332 ##22 pno1 (ENSSSAG00000054375) ENSSSAG00000054384 CDHR1 (ENSSSAG00000054429) ENSSSAG00000092867 LRIT1 (ENSSSAG00000105330) rgrb (ENSSSAG00000120288) ENSSSAG00000092692 ENSSSAG00000055677 ENSSSAG00000109391 bsk146 (ENSSSAG00000054264) ENSSSAG00000054256 ENSSSAG00000089767 ENSSSAG00000075269 dhrs7cb (ENSSSAG00000076079) ENSSSAG00000118228 River trout MODERN SPECIES 11 OIT3 (ENSSTUG00000000571) pla2g12b (ENSSTUG00000000603) ENSSTUG00000000673 ENSSTUG00000000681 pde10a (ENSSTUG00000000703) PRR18 (ENSSTUG00000000898) sft2d1 (ENSSTUG00000000902) ENSSTUG00000000931 ENSSTUG00000001018 zgc:65997 (ENSSTUG00000001022) pank1a (ENSSTUG00000001033) ENSSTUG00000001057 cisd1 (ENSSTUG00000001060) ADK (ENSSTUG00000001067) cnrip1b (ENSSTUG00000001070) dnaaf10 (ENSSTUG00000001082) ##22 pno1 (ENSSTUG00000001113) c1d (ENSSTUG00000001125) CDHR1 (ENSSTUG00000001153) LRIT2 (ENSSTUG00000001300) lrit1b (ENSSTUG00000001310) rgrb (ENSSTUG00000001319) TOB1 (ENSSTUG00000001327) ENSSTUG00000001439 bsk146 (ENSSTUG00000002676) ENSSTUG00000002686 ENSSTUG00000002722 dhrs7cb (ENSSTUG00000003034) ENSSTUG00000003094 hs3st3l (ENSSTUG00000003108) ENSSTUG00000003120 Oncorhynchus ANCESTRAL SPECIES 26 ENSGT00940000157851 ENSGT00390000008798.d.b.e ENSGT00390000009877 ENSGT00940000156543.c ENSGT00390000002164.a.c ENSGT00390000018525.a.a.r ENSGT00940000155989.e.f ENSGT01010000222287.B.a.a.a.a.a.a.f ENSGT00940000165449.i ENSGT00940000157373.l.e ENSGT00940000154445.a.d ENSGT00390000014320.c.b.d ENSGT00390000004284.e.e ENSGT00940000156530.c.ab.a ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405.pb ENSGT00940000155509.b.a.i ENSGT00940000159143.c.a ENSGT00940000156033.f.b ENSGT01090000260051.b.a.a.b.a.e ENSGT00940000154208.c.b.b ENSGT00940000163867.m ENSGT00940000165096.b.b.e ENSGT00940000156922.b.a.e ENSGT00940000164958.a.d.b ENSGT00940000157100.a.j ENSGT01100000263520.a.a.a.a.b.a.c.a.b.a.a ENSGT00940000154768.A.b.k.b ENSGT01050000244814.a.b.a.g ENSGT00940000158127.h Rainbow trout MODERN SPECIES 7 ENSOMYG00000071164 OIT3 (ENSOMYG00000008101) pla2g12b (ENSOMYG00000008035) ENSOMYG00000050336 pde10a (ENSOMYG00000056489) PRR18 (ENSOMYG00000071091) sft2d1 (ENSOMYG00000051704) ENSOMYG00000062569 ENSOMYG00000012149 ENSOMYG00000012162 pank1a (ENSOMYG00000012168) ENSOMYG00000012181 ENSOMYG00000053632 ENSOMYG00000061758 ENSOMYG00000055933 ENSOMYG00000012215 ##22 pno1 (ENSOMYG00000012229) ENSOMYG00000012244 CDHR1 (ENSOMYG00000012281) ENSOMYG00000060629 ENSOMYG00000012346 LRIT1 (ENSOMYG00000012359) rgrb (ENSOMYG00000012374) ENSOMYG00000055609 ENSOMYG00000012389 ENSOMYG00000012779 bsk146 (ENSOMYG00000018128) ENSOMYG00000048354 ENSOMYG00000018149 ENSOMYG00000018154 ENSOMYG00000018233 Oncorhynchus_a ANCESTRAL SPECIES 21 ENSGT00940000157528.g ENSGT00940000157851 ENSGT00390000008798.d.b.e ENSGT00390000009877 ENSGT00940000156543.c ENSGT00390000018525.a.a.r ENSGT00940000155989.e.f ENSGT01010000222287.B.a.a.a.a.a.a.f ENSGT00940000165449.i ENSGT00940000157373.l.e ENSGT00940000154445.a.d ENSGT00390000014320.c.b.d ENSGT00390000004284.e.e ENSGT00940000156530.c.ab.a ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405.pb ENSGT00940000155509.b.a.i ENSGT00940000159143.c.a ENSGT00940000156033.f.b ENSGT01090000260051.b.a.a.b.a.e ENSGT00940000154208.c.b.b ENSGT00940000163867.m ENSGT00940000165096.b.b.e ENSGT00940000156922.b.a.e ENSGT00940000164958.a.d.b ENSGT00940000157100.a.j ENSGT01100000263520.a.a.a.a.b.a.c.a.b.a.a ENSGT00940000154768.A.b.k.b ENSGT01050000244814.a.b.a.g ENSGT00940000158127.h Coho salmon MODERN SPECIES 12 micu1 (ENSOKIG00005037908) ENSOKIG00005037981 ENSOKIG00005037986 ENSOKIG00005038008 mcu (ENSOKIG00005038018) OIT3 (ENSOKIG00005038042) pla2g12b (ENSOKIG00005038363) ENSOKIG00005038572 pde10a (ENSOKIG00005038689) SFT2D1 (ENSOKIG00005041539) ENSOKIG00005041578 ENSOKIG00005041651 zgc:65997 (ENSOKIG00005041663) pank1a (ENSOKIG00005041703) CISD1 (ENSOKIG00005041739) dnaaf10 (ENSOKIG00005041789) ##22 pno1 (ENSOKIG00005041885) c1d (ENSOKIG00005041926) CDHR1 (ENSOKIG00005041956) LRIT2 (ENSOKIG00005042253) lrit1b (ENSOKIG00005042272) rgrb (ENSOKIG00005042295) TOB1 (ENSOKIG00005042337) ENSOKIG00005042455 ENSOKIG00005043401 bsk146 (ENSOKIG00005043410) ENSOKIG00005043443 ENSOKIG00005043702 ENSOKIG00005045983 hs3st3l (ENSOKIG00005045998) ENSOKIG00005046003 Chinook salmon MODERN SPECIES 16 ENSOTSG00005004717 ENSOTSG00005004721 mrps6 (ENSOTSG00005004723) SLC29A1 (ENSOTSG00005004734) psap (ENSOTSG00005004901) ENSOTSG00005004951 ly6pge (ENSOTSG00005004954) ENSOTSG00005004957 zgc:65997 (ENSOTSG00005004959) pank1a (ENSOTSG00005004960) ENSOTSG00005004961 ENSOTSG00005004962 CNRIP1 (ENSOTSG00005004964) ENSOTSG00005004965 PNO1 (ENSOTSG00005004967) dnaaf10 (ENSOTSG00005004969) ##22 c1d (ENSOTSG00005004971) bsk146 (ENSOTSG00005004984) ENSOTSG00005004986 ENSOTSG00005004991 dhrs7cb (ENSOTSG00005005003) ENSOTSG00005005008 hs3st3l (ENSOTSG00005005009) ENSOTSG00005005012 ENSOTSG00005005014 rcvrnb (ENSOTSG00005005015) gas7a (ENSOTSG00005005018) ENSOTSG00005005199 map2k4b (ENSOTSG00005005203) ENSOTSG00005007103 ENSOTSG00005007105 Huchen MODERN SPECIES 1311 ENSHHUG00000052387 ENSHHUG00000052378 ENSHHUG00000052376 zgc:65997 (ENSHHUG00000052374) pank1a (ENSHHUG00000052369) cisd1 (ENSHHUG00000052367) cnrip1b (ENSHHUG00000052366) ENSHHUG00000052353 pno1 (ENSHHUG00000052351) dnaaf10 (ENSHHUG00000052347) ##22 c1d (ENSHHUG00000052344) ENSHHUG00000052340 LRIT2 (ENSHHUG00000052339) lrit1b (ENSHHUG00000052338) rgrb (ENSHHUG00000052335) tob1b (ENSHHUG00000052334) Northern pike MODERN SPECIES 4 mcu (ENSELUG00000015640) OIT3 (ENSELUG00000015597) pla2g12b (ENSELUG00000015559) ENSELUG00000015550 pde10a (ENSELUG00000015533) TBXT (ENSELUG00000015495) PRR18 (ENSELUG00000015440) sft2d1 (ENSELUG00000015430) ENSELUG00000015384 ENSELUG00000015297 zgc:65997 (ENSELUG00000015263) pank1a (ENSELUG00000015238) ENSELUG00000015188 cisd1 (ENSELUG00000015140) cnrip1b (ENSELUG00000015120) dnaaf10 (ENSELUG00000015074) ##22 pno1 (ENSELUG00000014887) C1D (ENSELUG00000014823) ENSELUG00000014800 ENSELUG00000014766 ENSELUG00000014739 ENSELUG00000031773 SPRED2 (ENSELUG00000014634) ACTR2 (ENSELUG00000014576) papolg (ENSELUG00000014497) ENSELUG00000014470 ENSELUG00000001419 rel (ENSELUG00000014377) pex13 (ENSELUG00000014334) SANBR (ENSELUG00000014318) XPO1 (ENSELUG00000014306) Otomorpha ANCESTRAL SPECIES 10 ENSGT00940000164645.a ENSGT00940000157560.d.b ENSGT00940000157837.c ENSGT00940000153408.A ENSGT00940000153463.b.a ENSGT00940000157048 ENSGT00940000155636.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00940000157885 ENSGT00390000004284.e ENSGT00940000156530.c.`b.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.b ENSGT00940000154556.c.b ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b.b ENSGT00940000155337.ab ENSGT00940000177700 ENSGT00940000154186.a.q ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.r Clupeiformes DUPLICATION Clupeiformes ANCESTRAL SPECIES 8 ENSGT00940000154741.c ENSGT00940000157825.b ENSGT00940000164645.a ENSGT00940000157560.d.b ENSGT00940000157837.c ENSGT00940000153408.A ENSGT00940000153463.b.a ENSGT00940000157048 ENSGT00940000155636.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00940000157885 ENSGT00390000004284.e ENSGT00950000183091.A.b.m ##22 ENSGT00390000018052 ENSGT00950000183091.A.b.n ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.b ENSGT00940000154556.c.b ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b.b ENSGT00940000155337.ab ENSGT00940000154186.a.q ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b Denticle herring MODERN SPECIES 18 MYOF (ENSDCDG00000031451) PDE6C (ENSDCDG00000031596) lgi1a (ENSDCDG00000031706) MARK1 (ENSDCDG00000031753) EFEMP1 (ENSDCDG00000032296) XPO5 (ENSDCDG00000032338) tp53bp2a (ENSDCDG00000032387) polh (ENSDCDG00000032677) GTPBP2 (ENSDCDG00000032682) OTOR (ENSDCDG00000032687) pcsk2 (ENSDCDG00000032695) BFSP1 (ENSDCDG00000032709) prokr1b (ENSDCDG00000032711) plek (ENSDCDG00000032714) cnrip1b (ENSDCDG00000032715) dnaaf10 (ENSDCDG00000032721) ##22 c1d (ENSDCDG00000032727) ENSDCDG00000032730 meis1a (ENSDCDG00000032751) spred2b (ENSDCDG00000032821) actr2b (ENSDCDG00000032825) zgc:153169 (ENSDCDG00000032906) rab1ab (ENSDCDG00000032925) cep68 (ENSDCDG00000032975) slc1a4 (ENSDCDG00000013999) sertad2b (ENSDCDG00000014115) lgalslb (ENSDCDG00000014126) ENSDCDG00000014146 ENSDCDG00000014166 ENSDCDG00000014232 peli1b (ENSDCDG00000014302) Clupeiformes ANCESTRAL SPECIES 8 ENSGT00940000164645.a ENSGT00940000157560.d.b ENSGT00940000157837.c ENSGT00940000153408.A ENSGT00940000153463.b.a ENSGT00940000157048 ENSGT00940000155636.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00940000157885 ENSGT00390000004284.e ENSGT00950000183091.A.b.m ##22 ENSGT00390000018052 ENSGT00950000183091.A.b.n ##22 ENSGT00390000015405 ENSGT00390000009597.c ENSGT00940000156327.l ENSGT00940000156841.b ENSGT00940000154556.c.b ENSGT00810000125473.A ENSGT00940000157081 ENSGT00530000063867.b.b ENSGT00940000155337.ab ENSGT00940000154186.a.q ENSGT00940000166587 ENSGT00950000183050.b.b.b.a.a.a.a ENSGT00940000153464.B.z.b ENSGT00530000063410.a.r ENSGT00390000016551 Atlantic herring MODERN SPECIES 4 CCNJ (ENSCHAG00000016690) ENSCHAG00000016699 ENSCHAG00000016704 ENSCHAG00000016725 dntt (ENSCHAG00000016742) ENSCHAG00000017244 ENSCHAG00000017260 vox (ENSCHAG00000017267) ENSCHAG00000017282 ENSCHAG00000017294 plek (ENSCHAG00000017624) ENSCHAG00000017647 meis1b (ENSCHAG00000017672) spred2b (ENSCHAG00000018338) pno1 (ENSCHAG00000018350) dnaaf10 (ENSCHAG00000018360) ##22 c1d (ENSCHAG00000018513) slc1a4 (ENSCHAG00000018548) sertad2b (ENSCHAG00000018647) lgalslb (ENSCHAG00000018658) ENSCHAG00000018678 ENSCHAG00000018667 ENSCHAG00000018691 peli1b (ENSCHAG00000018837) ugp2b (ENSCHAG00000018928) ENSCHAG00000019202 ENSCHAG00000000462 mdh1ab (ENSCHAG00000000940) WDPCP (ENSCHAG00000001434) otx1 (ENSCHAG00000001784) EHBP1 (ENSCHAG00000001812) Denticle herring MODERN SPECIES 18 LTBP1 (ENSDCDG00000030298) rasgrp3 (ENSDCDG00000030143) FAM98A (ENSDCDG00000030067) adob (ENSDCDG00000030062) EGR2 (ENSDCDG00000030061) si:ch211-117n7.7 (ENSDCDG00000030059) tm9sf3 (ENSDCDG00000030048) prdx3 (ENSDCDG00000030045) dennd10 (ENSDCDG00000030044) ENSDCDG00000030042 eif3s10 (ENSDCDG00000030024) PGS1 (ENSDCDG00000030018) socs3b (ENSDCDG00000030015) tha1 (ENSDCDG00000030013) actn2b (ENSDCDG00000029474) DNAAF10 (ENSDCDG00000029450) ##22 chmp2a (ENSDCDG00000029448) ZNF365 (ENSDCDG00000029445) rtkn2 (ENSDCDG00000029419) BICC1 (ENSDCDG00000029416) ENSDCDG00000029413 slc16a9a (ENSDCDG00000029410) ccdc6a (ENSDCDG00000029409) ANK3 (ENSDCDG00000005198) top2a (ENSDCDG00000003819) tdrd1 (ENSDCDG00000003704) CCDC186 (ENSDCDG00000003575) adrb1 (ENSDCDG00000003554) NHLRC2 (ENSDCDG00000003530) dclre1a (ENSDCDG00000003509) ENSDCDG00000003496 Otophysi ANCESTRAL SPECIES ENSGT00950000182836.b.a.a ENSGT00940000158206 ENSGT00940000161750 ENSGT00940000154526 ENSGT00940000157048 ENSGT00940000155636.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00940000157885 ENSGT00390000004284.e ENSGT00940000156530.c.`b.b.f ENSGT00940000156530.c.`b.b.e.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00550000075035 ENSGT00530000063484.a ENSGT00940000158448 ENSGT00940000160850 ENSGT00990000204028.e ENSGT00940000155064 ENSGT00390000017590 ENSGT00940000153769.C ENSGT00940000158644 ENSGT00940000159467 ENSGT00730000111274 ENSGT01070000253744.a.a.b.b ENSGT00940000157889.g.a ENSGT00390000015862 ENSGT00940000154025.b Characiphysae ANCESTRAL SPECIES 1 ENSGT00940000158430 ENSGT00950000182836.b.a.a ENSGT00940000158206 ENSGT00940000161750 ENSGT00940000154526 ENSGT00940000157048 ENSGT00940000155636.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00940000157885 ENSGT00390000004284.e ENSGT00940000156530.c.`b.b.f ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00550000075035 ENSGT00530000063484.a ENSGT00940000158448 ENSGT00940000160850 ENSGT01030000235197 ENSGT00990000204028.e ENSGT00940000155064 ENSGT00390000017590 ENSGT00940000166866 ENSGT00940000155008.C ENSGT00940000168119 ENSGT00940000162318.c ENSGT00940000158644 ENSGT00940000159467 ENSGT00730000111274 Characiphysae_b ANCESTRAL SPECIES 69 ENSGT00940000166312.b.a ENSGT00940000164318 ENSGT00390000018842 ENSGT00940000158430 ENSGT00950000182836.b.a.a ENSGT00940000158206 ENSGT00940000161750 ENSGT00940000157048 ENSGT00940000155636.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00940000157885 ENSGT00390000004284.e ENSGT00950000183091.A.b ##22 ENSGT00940000156530.c.`b.b.f ENSGT00390000018052 ENSGT00550000075035 ENSGT00530000063484.a ENSGT00940000158448 ENSGT00940000160850 ENSGT01030000235197 ENSGT00990000204028.e ENSGT00940000155064 ENSGT00390000017590 ENSGT00940000166866 ENSGT00940000155008.C ENSGT00940000168119 ENSGT00940000162318.c ENSGT00940000158644 Characoidei ANCESTRAL SPECIES 93 ENSGT00940000158430 ENSGT00950000182836.b.a.a ENSGT00940000158206 ENSGT00940000161750 ENSGT00940000154526 ENSGT00940000157048 ENSGT00940000155636.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00940000157885 ENSGT00390000004284.e ENSGT00940000156530.c.`b.b.f ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00550000075035 ENSGT00530000063484.a ENSGT00940000158448 ENSGT00940000160850 ENSGT01030000235197 ENSGT00990000204028.e ENSGT00940000155064 ENSGT00390000017590 ENSGT00940000166866 ENSGT00940000155008.C ENSGT00940000168119 ENSGT00940000162318.c ENSGT00940000158644 ENSGT00940000159467 ENSGT00730000111274 Red-bellied piranha MODERN SPECIES 31 tmem14a (ENSPNAG00000006199) ENSPNAG00000025779 ENSPNAG00000025668 ENSPNAG00000025630 ENSPNAG00000025341 polh (ENSPNAG00000025318) GTPBP2 (ENSPNAG00000025128) OTOR (ENSPNAG00000006098) pcsk2 (ENSPNAG00000025064) BFSP1 (ENSPNAG00000025052) prokr1b (ENSPNAG00000003862) plek (ENSPNAG00000004768) cnrip1b (ENSPNAG00000006356) PPP3R1 (ENSPNAG00000024959) pno1 (ENSPNAG00000004824) dnaaf10 (ENSPNAG00000024906) ##22 psmb1 (ENSPNAG00000024895) perp (ENSPNAG00000024864) TNFAIP3 (ENSPNAG00000024835) olig3 (ENSPNAG00000024761) si:ch73-52p7.1 (ENSPNAG00000024752) ifngr1l (ENSPNAG00000024743) rab23 (ENSPNAG00000024728) bag2 (ENSPNAG00000024676) ENSPNAG00000005368 DST (ENSPNAG00000024585) ENSPNAG00000007002 ENSPNAG00000006656 ENSPNAG00000024132 ENSPNAG00000003806 bmp5 (ENSPNAG00000024063) Mexicana tetra MODERN SPECIES 17 med6 (ENSAMXG00000021470) PCNX1 (ENSAMXG00000021460) lgmn (ENSAMXG00000021444) ENSAMXG00000021435 ENSAMXG00000043982 lrrc1 (ENSAMXG00000005276) ENSAMXG00000012716 klhl31 (ENSAMXG00000012698) ENSAMXG00000029916 GCLC (ENSAMXG00000012685) elovl5 (ENSAMXG00000012674) fbxo9 (ENSAMXG00000012644) cnrip1b (ENSAMXG00000031062) PPP3R1 (ENSAMXG00000033267) pno1 (ENSAMXG00000014973) dnaaf10 (ENSAMXG00000014971) ##22 psmb1 (ENSAMXG00000033075) perp (ENSAMXG00000039864) TNFAIP3 (ENSAMXG00000014966) olig3 (ENSAMXG00000038663) si:ch73-52p7.1 (ENSAMXG00000031047) ifngr1l (ENSAMXG00000036514) ENSAMXG00000038509 rab23 (ENSAMXG00000014960) bag2 (ENSAMXG00000014959) ENSAMXG00000014956 ENSAMXG00000037736 ENSAMXG00000042110 ENSAMXG00000030211 ENSAMXG00000043116 ENSAMXG00000040385 Electric eel MODERN SPECIES 16 csmd1a (ENSEEEG00000009041) ENSEEEG00000009039 angpt2a (ENSEEEG00000009037) mcph1 (ENSEEEG00000009034) agpat5 (ENSEEEG00000009032) tmem14a (ENSEEEG00000009028) ENSEEEG00000009026 polh (ENSEEEG00000009024) GTPBP2 (ENSEEEG00000009023) ENSEEEG00000009022 pcsk2 (ENSEEEG00000009002) prokr1b (ENSEEEG00000008998) plek (ENSEEEG00000008997) cnrip1b (ENSEEEG00000008996) pno1 (ENSEEEG00000008995) dnaaf10 (ENSEEEG00000008989) ##22 psmb1 (ENSEEEG00000008988) perp (ENSEEEG00000008987) TNFAIP3 (ENSEEEG00000008986) olig3 (ENSEEEG00000008985) ENSEEEG00000008984 rab23 (ENSEEEG00000008983) bag2 (ENSEEEG00000008982) ENSEEEG00000008981 DST (ENSEEEG00000008538) COL21A1 (ENSEEEG00000008488) bmp5 (ENSEEEG00000008472) hmgcll1 (ENSEEEG00000008469) hcrtr2 (ENSEEEG00000008468) ENSEEEG00000008467 ENSEEEG00000008466 Channel catfish DUPLICATION Channel catfish MODERN SPECIES 22 ANGPT2 (ENSIPUG00000017065) mcph1 (ENSIPUG00000017026) agpat5 (ENSIPUG00000016988) tmem14a (ENSIPUG00000016975) gsta.1 (ENSIPUG00000016941) polh (ENSIPUG00000016919) GTPBP2 (ENSIPUG00000016892) OTOR (ENSIPUG00000016881) pcsk2 (ENSIPUG00000016823) bfsp1 (ENSIPUG00000016800) prokr1b (ENSIPUG00000016791) PLEK (ENSIPUG00000016759) cnrip1b (ENSIPUG00000016747) Ppp3r1 (ENSIPUG00000016713) pno1 (ENSIPUG00000016673) dnaaf10 (ENSIPUG00000016659) ##22 psmb1 (ENSIPUG00000016641) perp (ENSIPUG00000016580) Tnfaip3 (ENSIPUG00000016555) olig3 (ENSIPUG00000016546) ENSIPUG00000016539 si:ch73-52p7.1 (ENSIPUG00000016526) ifngr1l (ENSIPUG00000016513) rab23 (ENSIPUG00000016494) bag2 (ENSIPUG00000016482) znf451 (ENSIPUG00000016455) ENSIPUG00000016436 ENSIPUG00000016405 DST (ENSIPUG00000016242) ENSIPUG00000016187 col21a1 (ENSIPUG00000016028) Channel catfish MODERN SPECIES 25 ENSIPUG00000016181 dnaaf10 (ENSIPUG00000016172) ##22 ENSIPUG00000016075 ENSIPUG00000016056 ENSIPUG00000016045 ENSIPUG00000015986 ENSIPUG00000015934 pdcl3 (ENSIPUG00000015922) ENSIPUG00000015902 ccdc138 (ENSIPUG00000015861) edar (ENSIPUG00000015837) sh3rf3 (ENSIPUG00000015821) AKAP17A (ENSIPUG00000015794) asmt (ENSIPUG00000015722) ENSIPUG00000015711 ENSIPUG00000015609 ENSIPUG00000015579 Cyprinoidei ANCESTRAL SPECIES 5 ENSGT00940000158206 ENSGT00940000161750 ENSGT00940000154526 ENSGT00940000157048 ENSGT00940000155636.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965 ENSGT00390000016976 ENSGT00940000166657 ENSGT00940000157885 ENSGT00390000004284.e ENSGT00940000156530.c.`b.b.e.b ENSGT00390000018052 ENSGT00950000183091.A.b ##22 ENSGT00550000075035 ENSGT00530000063484.a ENSGT00940000158448 ENSGT00940000160850 ENSGT01030000235197 ENSGT00940000165457.a.a.a.a.b ENSGT00940000155064 ENSGT00390000017590 ENSGT00940000162318.c ENSGT00940000158644 ENSGT00940000159467 ENSGT00730000111274 ENSGT01070000253744.a.a.b.b ENSGT00940000157889.g.a ENSGT00390000015862 Zebrafish MODERN SPECIES 4 nrxn1b (ENSDARG00000063635) polh (ENSDARG00000070231) gsta.2 (ENSDARG00000039832) ENSDARG00000113274 ENSDARG00000090228 tmem14a (ENSDARG00000095157) ENSDARG00000117000 ENSDARG00000115762 pcsk2 (ENSDARG00000019451) BFSP1 (ENSDARG00000074919) prokr1b (ENSDARG00000111213) plek (ENSDARG00000104325) cnrip1b (ENSDARG00000037337) ppp3r1a (ENSDARG00000092659) pno1 (ENSDARG00000008502) dnaaf10 (ENSDARG00000037334) ##22 ENSDARG00000115989 psmb1 (ENSDARG00000009640) perp (ENSDARG00000063572) TNFAIP3 (ENSDARG00000027777) olig3 (ENSDARG00000074253) si:ch73-52p7.1 (ENSDARG00000095184) ifngr1l (ENSDARG00000074488) rab23 (ENSDARG00000004151) bag2 (ENSDARG00000035005) ENSDARG00000076939 ENSDARG00000102406 ENSDARG00000098631 ENSDARG00000115956 ENSDARG00000101858 ENSDARG00000074745 Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00950000183091.A.b.q.a.a.a ##22 Goldfish MODERN SPECIES 31 ENSCARG00000044628 ENSCARG00000044648 ENSCARG00000044656 ENSCARG00000044696 polh (ENSCARG00000044718) GTPBP2 (ENSCARG00000044813) ENSCARG00000045972 pcsk2 (ENSCARG00000046045) ENSCARG00000046393 BFSP1 (ENSCARG00000046400) ENSCARG00000046495 prokr1b (ENSCARG00000046600) plek (ENSCARG00000046648) ppp3r1a (ENSCARG00000047025) pno1 (ENSCARG00000047146) dnaaf10 (ENSCARG00000047188) ##22 ENSCARG00000047284 ENSCARG00000047302 ENSCARG00000047313 ENSCARG00000047321 ENSCARG00000047327 ENSCARG00000047344 gdf6b (ENSCARG00000047352) ENSCARG00000047358 nudcd1 (ENSCARG00000047365) trhrb (ENSCARG00000047818) TMEM74 (ENSCARG00000047825) eif3eb (ENSCARG00000047873) pleca (ENSCARG00000048359) eppk1 (ENSCARG00000050478) slc52a2 (ENSCARG00000050490) Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183091.A.b.q.a.a.a ##22 Golden-line barbel MODERN SPECIES 3111 dnaaf10 (ENSSGRG00000001815) ##22 Cyprininae ANCESTRAL SPECIES 120 ENSGT00940000160850 ENSGT00940000158448.n ENSGT00530000063484.a.s.a ENSGT00940000158206 ENSGT00940000154526.a ENSGT00940000155636.b.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965.d ENSGT00390000016976.d ENSGT00940000166657.d ENSGT00940000157885.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b.e.b ENSGT00390000018052.d ENSGT00950000183091.A.b.r ##22 ENSGT00950000183091.A.b.q.a.a.b ##22 ENSGT00390000018052.c.b ENSGT00950000183091.A.b.q.b ##22 ENSGT00940000164383.j ENSGT00390000008454 ENSGT00940000153463.b.a.b ENSGT00940000157322.b.a.d ENSGT00940000154965.A ENSGT00940000162611.b.a.b ENSGT00570000079239 ENSGT00390000013448.a.a.h ENSGT00390000002970.a.b ENSGT00390000002970.a.a ENSGT00390000006205.a ENSGT00940000157837.c.a Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183091.A.b.q.a.a.b ##22 Golden-line barbel MODERN SPECIES 799 olig3 (ENSSGRG00000026135) TNFAIP3 (ENSSGRG00000026141) psmb1 (ENSSGRG00000026191) tmem14a (ENSSGRG00000026245) ENSSGRG00000026248 ENSSGRG00000026256 ENSSGRG00000026309 ENSSGRG00000026310 pcsk2 (ENSSGRG00000026314) ENSSGRG00000026417 prokr1b (ENSSGRG00000026716) plek (ENSSGRG00000026717) cnrip1b (ENSSGRG00000026895) ppp3r1a (ENSSGRG00000026898) pno1 (ENSSGRG00000026910) dnaaf10 (ENSSGRG00000026925) ##22 ENSSGRG00000026947 Goldfish MODERN SPECIES 4 si:ch73-52p7.1 (ENSCARG00000016993) olig3 (ENSCARG00000017000) TNFAIP3 (ENSCARG00000017004) perp (ENSCARG00000017018) psmb1 (ENSCARG00000017029) tmem14a (ENSCARG00000017089) ENSCARG00000017109 GTPBP2 (ENSCARG00000017120) OTOR (ENSCARG00000017181) pcsk2 (ENSCARG00000017217) BFSP1 (ENSCARG00000017522) prokr1b (ENSCARG00000017551) ENSCARG00000017562 plek (ENSCARG00000043514) cnrip1b (ENSCARG00000043719) dnaaf10 (ENSCARG00000043739) ##22 pno1 (ENSCARG00000044036) ENSCARG00000044115 ENSCARG00000044143 ENSCARG00000044154 ENSCARG00000044337 cutc (ENSCARG00000046534) tp53bp2a (ENSCARG00000046687) slit1a (ENSCARG00000046849) ENSCARG00000048431 nvl (ENSCARG00000048446) degs1 (ENSCARG00000048487) fbxo28 (ENSCARG00000048502) ENSCARG00000048507 HEATR5B (ENSCARG00000048553) ENSCARG00000049863 Cyprininae ANCESTRAL SPECIES 1345 ENSGT00390000018052.c.a ENSGT00950000183091.A.b.q.a.b ##22 Cyprininae_a ANCESTRAL SPECIES 444 ENSGT00940000158448.m ENSGT00530000063484.a.s.b ENSGT00550000075035 ENSGT00940000158206.c ENSGT00940000161750 ENSGT00940000157048 ENSGT00940000155636.b.b.a ENSGT01060000253473 ENSGT00940000156965.c ENSGT00390000016976.c ENSGT00940000166657.c ENSGT00940000157885.b ENSGT00390000004284.e.b ENSGT00390000018052.c.a ENSGT00950000183091.A.b.q.a.b ##22 ENSGT00670000098179.d.b ENSGT01090000260029.a.b.b.b.a.a.b.b.b.b.a.b.a.a.b.b ENSGT01030000234583.a.a.c.b.a.a.a.b.b.a.a.a.a.a.a.a.a.b.b ENSGT01090000260030.a.b.a.b.b.a.b.a.a.a.a.a.a.a.a.a.b.b.b.b.a.a.b.b.b.a Common carp reference MODERN SPECIES 48 ENSCCRG00000000730 ENSCCRG00000000741 ENSCCRG00000000760 ENSCCRG00000082379 ENSCCRG00000071793 ENSCCRG00000058742 pcsk2 (ENSCCRG00000013445) ENSCCRG00000013437 ENSCCRG00000001174 ENSCCRG00000075702 prokr1b (ENSCCRG00000051227) ENSCCRG00000077993 plek (ENSCCRG00000050078) cnrip1b (ENSCCRG00000058935) pno1 (ENSCCRG00000064184) dnaaf10 (ENSCCRG00000050061) ##22 ENSCCRG00000068757 ENSCCRG00000060253 ENSCCRG00000070835 ENSCCRG00000077864 ENSCCRG00000056091 ENSCCRG00000004121 ENSCCRG00000066056 ENSCCRG00000059129 ENSCCRG00000070050 ENSCCRG00000030074 ENSCCRG00000063766 cox15 (ENSCCRG00000049621) ENSCCRG00000052738 ENSCCRG00000008914 ENSCCRG00000006380 Cyprininae ANCESTRAL SPECIES 120 ENSGT00530000063484.a.s.a ENSGT00940000158206 ENSGT00940000154526.a ENSGT00940000155636.b.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965.d ENSGT00390000016976.d ENSGT00940000166657.d ENSGT00940000157885.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b.e.b ENSGT00390000018052.d ENSGT00950000183091.A.b.r ##22 ENSGT00950000183091.A.b.q.a.a.b ##22 ENSGT00390000018052.c.b ENSGT00950000183091.A.b.q.b ##22 ENSGT00940000164383.j ENSGT00390000008454 ENSGT00940000153463.b.a.b ENSGT00940000157322.b.a.d ENSGT00940000154965.A ENSGT00940000162611.b.a.b ENSGT00570000079239 ENSGT00390000013448.a.a.h ENSGT00390000002970.a.b ENSGT00390000002970.a.a ENSGT00390000006205.a ENSGT00940000157837.c.a Cyprininae_a ANCESTRAL SPECIES 1014 ENSGT00390000018052.c.b ENSGT00950000183091.A.b.q.b ##22 Common carp reference MODERN SPECIES 18 ENSCCRG00000000829 ENSCCRG00000061866 OTOR (ENSCCRG00000000836) ENSCCRG00000063892 pcsk2 (ENSCCRG00000040428) BFSP1 (ENSCCRG00000040795) prokr1b (ENSCCRG00000067016) cnrip1b (ENSCCRG00000066285) plek (ENSCCRG00000015167) ppp3r1a (ENSCCRG00000065352) pno1 (ENSCCRG00000018512) ENSCCRG00000070978 ENSCCRG00000061026 ENSCCRG00000081490 ENSCCRG00000070863 dnaaf10 (ENSCCRG00000018475) ##22 ENSCCRG00000015517 ENSCCRG00000049565 cox15 (ENSCCRG00000001468) ENSCCRG00000065931 ENSCCRG00000049662 cutc (ENSCCRG00000074952) tp53bp2a (ENSCCRG00000034125) slit1a (ENSCCRG00000082725) ENSCCRG00000045777 nvl (ENSCCRG00000055816) degs1 (ENSCCRG00000056597) ENSCCRG00000052847 ENSCCRG00000080849 ENSCCRG00000081311 fbxo28 (ENSCCRG00000074796) Cyprininae ANCESTRAL SPECIES 120 ENSGT01030000235197.b ENSGT00940000160850 ENSGT00940000158448.n ENSGT00530000063484.a.s.a ENSGT00940000158206 ENSGT00940000154526.a ENSGT00940000155636.b.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965.d ENSGT00390000016976.d ENSGT00940000166657.d ENSGT00940000157885.a ENSGT00390000004284.e ENSGT00940000156530.c.`b.b.e.b ENSGT00390000018052.d ENSGT00950000183091.A.b.r ##22 ENSGT00950000183091.A.b.q.a.a.b ##22 ENSGT00390000018052.c.b ENSGT00950000183091.A.b.q.b ##22 ENSGT00940000164383.j ENSGT00390000008454 ENSGT00940000153463.b.a.b ENSGT00940000157322.b.a.d ENSGT00940000154965.A ENSGT00940000162611.b.a.b ENSGT00570000079239 ENSGT00390000013448.a.a.h ENSGT00390000002970.a.b ENSGT00390000002970.a.a ENSGT00390000006205.a ENSGT00940000157837.c.a Cyprininae_a ANCESTRAL SPECIES 335 ENSGT00940000154526.a ENSGT00940000158206.d ENSGT00940000155636.b.b.b ENSGT00950000182767.b.a.b.b.a ENSGT00940000156965.d ENSGT00390000016976.d ENSGT00940000166657.d ENSGT00940000157885.a ENSGT00390000004284.e.a ENSGT00940000156530.c.`b.b.e.b ENSGT00390000018052.d ENSGT00950000183091.A.b.r ##22 ENSGT00940000154292.a.b.b.a.b ENSGT00940000154292.a.b.b.a.a ENSGT00390000002223 ENSGT00940000164383.j ENSGT00390000008454 ENSGT00940000153463.b.a.b ENSGT00940000157322.b.a.d ENSGT00940000154965.A ENSGT00940000162611.b.a.b ENSGT00570000079239 ENSGT00390000013448.a.a.h ENSGT00390000002970.a.a ENSGT00390000006205.a ENSGT00940000157837.c.a ENSGT00940000164645.a.d Golden-line barbel MODERN SPECIES 634 plek (ENSSGRG00000015416) ppp3r1a (ENSSGRG00000015588) pno1 (ENSSGRG00000015590) DNAAF10 (ENSSGRG00000015592) ##22 ENSSGRG00000015593 ENSSGRG00000015594 nrxn1b (ENSSGRG00000015595) cox15 (ENSSGRG00000015596) ENSSGRG00000015605 cutc (ENSSGRG00000015761) tp53bp2a (ENSSGRG00000015839) slit1a (ENSSGRG00000015861) ENSSGRG00000016957 nvl (ENSSGRG00000016958) fbxo28 (ENSSGRG00000016962) HEATR5B (ENSSGRG00000016971) EFEMP1 (ENSSGRG00000017082) Ecdysozoa ANCESTRAL SPECIES ENSGT00950000183091.A.b ##22 Fruitfly MODERN SPECIES 18 CG32188 (FBgn0052188) CG32189 (FBgn0052189) CG5577 (FBgn0036759) CG5567 (FBgn0036760) MED19 (FBgn0036761) CG7430 (FBgn0036762) TrpRS-m (FBgn0036763) CG5535 (FBgn0036764) CG34002 (FBgn0054002) CG7408 (FBgn0036765) CG5506 (FBgn0036766) CG16775 (FBgn0036767) CG7402 (FBgn0036768) Tsp74F (FBgn0036769) Prestin (FBgn0036770) Wdr92 (FBgn0036771) ##22 CG5290 (FBgn0036772) Eip75B (FBgn0000568) CG32192 (FBgn0052192) CG42393 (FBgn0259739) CG44006 (FBgn0264748) CG44005 (FBgn0264747) CG44004 (FBgn0264746) CG34253 (FBgn0085282) CG13698 (FBgn0036773) mRpS26 (FBgn0036774) Polr3D (FBgn0036775) mus304 (FBgn0002901) CG32195 (FBgn0052195) CG7341 (FBgn0036777) CG42853 (FBgn0262100) Yeast MODERN SPECIES 15 YOR012W IRC11 (YOR013W) RTS1 (YOR014W) YOR015W ERP4 (YOR016C) PET127 (YOR017W) ROD1 (YOR018W) YOR019W HSP10 (YOR020C) YOR020W-A SFM1 (YOR021C) DDL1 (YOR022C) AHC1 (YOR023C) YOR024W HST3 (YOR025W) BUB3 (YOR026W) #22 STI1 (YOR027W) CIN5 (YOR028C) YOR029W DFG16 (YOR030W) HMS1 (YOR032C) YOR032W-A EXO1 (YOR033C) AKR2 (YOR034C) YOR034C-A SHE4 (YOR035C) PEP12 (YOR036W) CYC2 (YOR037W) HIR2 (YOR038C) CKB2 (YOR039W) GLO4 (YOR040W)