Bilateria	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a #22
Chordata	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a #22
Gnathostomata	ANCESTRAL SPECIES	10	ENSGT00940000155996	ENSGT00390000017265	ENSGT00940000156602	ENSGT00390000004068	ENSGT00940000155447	ENSGT00500000044926	ENSGT00390000011476	ENSGT00940000169682	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.A.b.a ##10	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00530000063474.A	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00940000175884	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696
Euteleostomi	ANCESTRAL SPECIES	4	ENSGT00390000004068	ENSGT00940000155447	ENSGT00500000044926	ENSGT00390000011476	ENSGT00940000169682	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00940000163882	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00530000063474.A	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36
Sarcopterygii	ANCESTRAL SPECIES	13	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00950000183145.B.a.a ##10	ENSGT00950000183145.B.a.b ##10	ENSGT00940000162108	ENSGT00950000183145.A.b.a ##10	ENSGT00940000164475	ENSGT00940000163882	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00530000063474.A	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36
Tetrapoda	ANCESTRAL SPECIES	17	ENSGT00500000044926	ENSGT00390000011476	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00950000183145.B.a.a ##10	ENSGT00950000183145.B.a.b ##10	ENSGT00940000162108	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Amniota	ANCESTRAL SPECIES	10	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.A.b.a ##10	ENSGT00940000164475	ENSGT00950000183145.D ##10	ENSGT00950000183145.E #10	ENSGT00940000163882	ENSGT00940000154525.b.a #13	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Mammalia	ANCESTRAL SPECIES	14	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.A.b.a ##10	ENSGT00950000183145.D ##10	ENSGT00950000183145.E #10	ENSGT00940000163882	ENSGT00940000154525.b.a #13	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Theria	ANCESTRAL SPECIES	26	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.C ##10	ENSGT00950000183145.D ##10	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108	ENSGT00940000154525.b.a #13	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Eutheria	ANCESTRAL SPECIES	13	ENSGT00950000183145.C ##10	ENSGT00950000183145.D ##10	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108	ENSGT00940000165716	ENSGT00940000154525.b.a #13	ENSGT00940000163005 #15	ENSGT00390000017384 #16	ENSGT00940000164044	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT01010000224541	ENSGT00940000162108.tb	ENSGT00940000162108.sb.a	ENSGT00940000162108.sb.b	ENSGT00940000165716	ENSGT00940000154525.b.a #13	ENSGT00940000163005 #15	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT01010000224541	ENSGT00940000162108.tb	ENSGT00940000162108.sb.a	ENSGT00940000162108.sb.b	ENSGT00940000165716	ENSGT00940000154525.b.a #13	ENSGT00940000163005 #15	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00940000168312	ENSGT00390000014797 #35	ENSGT00940000159140.d #36
Primates	ANCESTRAL SPECIES	16	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT01010000224541	ENSGT00940000162108.tb	ENSGT00940000162108.sb.a	ENSGT00940000162108.sb.b	ENSGT00940000154525.b.a #13	ENSGT00940000163005 #15	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00940000168312	ENSGT00390000014797 #35	ENSGT00940000159140.d #36
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000163005 #15	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00940000168312	ENSGT00390000014797 #35	ENSGT00940000159140.d #36
Simiiformes	ANCESTRAL SPECIES	17	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00390000017384.h ##16	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00940000168312	ENSGT00390000014797 #35	ENSGT00940000159140.d #36
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00390000017384.h ##16	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00910000147603	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00500000045038.y.a.a	ENSGT00390000012491 #34	ENSGT00940000168312
Hominoidea	DUPLICATION
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00650000095054 #8	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00390000017384.h ##16	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.g #22	ENSGT00950000183001.a.a #23	ENSGT00910000147603	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00500000045038.y.a.a	ENSGT00390000012491 #34	ENSGT00950000182987.c.a.a.db.b
Hominidae	ANCESTRAL SPECIES	13	ENSGT00650000095054 #8	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00390000017384.h ##16	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.g #22	ENSGT00950000183001.a.a #23	ENSGT00910000147603	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00500000045038.y.a.a	ENSGT00390000012491 #34	ENSGT00950000182987.c.a.a.db.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00650000095054 #8	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00390000017384.h ##16	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.g #22	ENSGT00950000183001.a.a #23	ENSGT00910000147603	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00500000045038.y.a.a	ENSGT00390000012491 #34	ENSGT00950000182987.c.a.a.db.b
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00650000095054 #8	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00390000017384.h ##16	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.g #22	ENSGT00950000183001.a.a #23	ENSGT00910000147603	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00500000045038.y.a.a	ENSGT00390000012491 #34	ENSGT00950000182987.c.a.a.db.b
Human	MODERN SPECIES	1	PLEKHA1 (ENSG00000107679) #7	ARMS2 (ENSG00000254636) #8	HTRA1 (ENSG00000166033) #9	DMBT1 (ENSG00000187908) #10	SPADH (ENSG00000286135) #11	C10orf120 (ENSG00000183559) #12	CUZD1 (ENSG00000138161) #13	FAM24B (ENSG00000213185) #14	FAM24A (ENSG00000203795) #15	C10orf88 (ENSG00000119965) #16	PSTK (ENSG00000179988) #17	IKZF5 (ENSG00000095574) #18	ACADSB (ENSG00000196177) #19	HMX3 (ENSG00000188620) #20	HMX2 (ENSG00000188816) #21	BUB3 (ENSG00000154473) #22	GPR26 (ENSG00000154478) #23	CPXM2 (ENSG00000121898) #24	CHST15 (ENSG00000182022) #25	OAT (ENSG00000065154) #26	NKX1-2 (ENSG00000229544) #27	LHPP (ENSG00000107902) #28	FAM53B (ENSG00000189319) #29	EEF1AKMT2 (ENSG00000203791) #30	ABRAXAS2 (ENSG00000165660) #31	ZRANB1 (ENSG00000019995) #32	CTBP2 (ENSG00000175029) #33	TEX36 (ENSG00000175018) #34	EDRF1 (ENSG00000107938) #35	MMP21 (ENSG00000154485) #36	UROS (ENSG00000188690) #37
Pan	ANCESTRAL SPECIES	16	ENSGT00940000155157 #7	ENSGT00650000095054 #8	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00390000017384.h ##16	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.g #22	ENSGT00950000183001.a.a #23	ENSGT00910000147603	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00500000045038.y.a.a	ENSGT00390000012491 #34	ENSGT00950000182987.c.a.a.db.b
Bonobo	MODERN SPECIES	1	PLEKHA1 (ENSPPAG00000003709) #7	ARMS2 (ENSPPAG00000041770) #8	HTRA1 (ENSPPAG00000000055) #9	DMBT1 (ENSPPAG00000029246) #10	C10orf120 (ENSPPAG00000027128) #12	CUZD1 (ENSPPAG00000038806) #13	FAM24B (ENSPPAG00000030186) #14	ENSPPAG00000026413 ##16	FAM24A (ENSPPAG00000029503) #15	C10orf88 (ENSPPAG00000040286) #16	PSTK (ENSPPAG00000030978) #17	IKZF5 (ENSPPAG00000032125) #18	ACADSB (ENSPPAG00000036912) #19	HMX3 (ENSPPAG00000043159) #20	ENSPPAG00000043570 #21	BUB3 (ENSPPAG00000030058) #22	ENSPPAG00000040773 #23	ENSPPAG00000024928	CPXM2 (ENSPPAG00000037917) #24	CHST15 (ENSPPAG00000037921) #25	OAT (ENSPPAG00000034558) #26	ENSPPAG00000037855 #27	LHPP (ENSPPAG00000041898) #28	FAM53B (ENSPPAG00000027228) #29	EEF1AKMT2 (ENSPPAG00000034943) #30	ABRAXAS2 (ENSPPAG00000031972) #31	ZRANB1 (ENSPPAG00000036455) #32	CTBP2 (ENSPPAG00000032942) #33	TEX36 (ENSPPAG00000034284) #34	EDRF1 (ENSPPAG00000028277) #35	MMP21 (ENSPPAG00000043548) #36
Chimpanzee	MODERN SPECIES	1	PLEKHA1 (ENSPTRG00000003010) #7	ARMS2 (ENSPTRG00000051999) #8	HTRA1 (ENSPTRG00000003011) #9	DMBT1 (ENSPTRG00000022758) #10	C10H10orf120 (ENSPTRG00000003012) #12	CUZD1 (ENSPTRG00000003015) #13	FAM24B (ENSPTRG00000034300) #14	ENSPTRG00000048474 ##16	FAM24A (ENSPTRG00000029673) #15	C10H10orf88 (ENSPTRG00000003017) #16	PSTK (ENSPTRG00000003018) #17	IKZF5 (ENSPTRG00000003019) #18	ACADSB (ENSPTRG00000003020) #19	HMX3 (ENSPTRG00000046925) #20	HMX2 (ENSPTRG00000047334) #21	BUB3 (ENSPTRG00000044868) #22	GPR26 (ENSPTRG00000045403) #23	ENSPTRG00000043279	CPXM2 (ENSPTRG00000003027) #24	CHST15 (ENSPTRG00000023167) #25	OAT (ENSPTRG00000003028) #26	NKX1-2 (ENSPTRG00000046548) #27	LHPP (ENSPTRG00000003030) #28	FAM53B (ENSPTRG00000003031) #29	EEF1AKMT2 (ENSPTRG00000032571) #30	ABRAXAS2 (ENSPTRG00000003033) #31	ZRANB1 (ENSPTRG00000003034) #32	CTBP2 (ENSPTRG00000003035) #33	ENSPTRG00000050946	TEX36 (ENSPTRG00000003037) #34	ENSPTRG00000052584
Gorilla	MODERN SPECIES	1	BTBD16 (ENSGGOG00000004960)	PLEKHA1 (ENSGGOG00000005120) #7	ARMS2 (ENSGGOG00000037501) #8	HTRA1 (ENSGGOG00000004853) #9	C10orf120 (ENSGGOG00000026034) #12	CUZD1 (ENSGGOG00000007184) #13	FAM24B (ENSGGOG00000007190) #14	ENSGGOG00000006191 ##16	FAM24A (ENSGGOG00000007194) #15	C10orf88 (ENSGGOG00000007191) #16	PSTK (ENSGGOG00000003866) #17	IKZF5 (ENSGGOG00000003823) #18	ACADSB (ENSGGOG00000003827) #19	HMX3 (ENSGGOG00000023271) #20	HMX2 (ENSGGOG00000039592) #21	BUB3 (ENSGGOG00000023971) #22	ENSGGOG00000037837 #23	ENSGGOG00000038946	CPXM2 (ENSGGOG00000007111) #24	CHST15 (ENSGGOG00000009734) #25	OAT (ENSGGOG00000000848) #26	NKX1-2 (ENSGGOG00000042370) #27	ENSGGOG00000009416 #28	FAM53B (ENSGGOG00000001653) #29	EEF1AKMT2 (ENSGGOG00000024976) #30	ABRAXAS2 (ENSGGOG00000014025) #31	ZRANB1 (ENSGGOG00000016848) #32	ENSGGOG00000036916 ##33	CTBP2 (ENSGGOG00000007304) #33	TEX36 (ENSGGOG00000007492) #34	ENSGGOG00000038821
Orangutan	MODERN SPECIES	1	PLEKHA1 (ENSPPYG00000002715) #7	HTRA1 (ENSPPYG00000002716) #9	ENSPPYG00000002717 #10	SPADH (ENSPPYG00000002718) #11	C10orf120 (ENSPPYG00000002719) #12	CUZD1 (ENSPPYG00000002722) #13	ENSPPYG00000030182 #14	ENSPPYG00000037859 ##16	FAM24A (ENSPPYG00000002724) #15	C10orf88 (ENSPPYG00000002725) #16	PSTK (ENSPPYG00000002726) #17	IKZF5 (ENSPPYG00000038620) #18	ACADSB (ENSPPYG00000002728) #19	HMX3 (ENSPPYG00000002729) #20	HMX2 (ENSPPYG00000033793) #21	BUB3 (ENSPPYG00000002731) #22	GPR26 (ENSPPYG00000002734) #23	CPXM2 (ENSPPYG00000002735) #24	CHST15 (ENSPPYG00000002736) #25	OAT (ENSPPYG00000002737) #26	NKX1-2 (ENSPPYG00000039436) #27	LHPP (ENSPPYG00000002740) #28	FAM53B (ENSPPYG00000002741) #29	EEF1AKMT2 (ENSPPYG00000002742) #30	ABRAXAS2 (ENSPPYG00000033191) #31	ZRANB1 (ENSPPYG00000002745) #32	CTBP2 (ENSPPYG00000002746) #33	TEX36 (ENSPPYG00000002747) #34	ENSPPYG00000035256	EDRF1 (ENSPPYG00000002749) #35	MMP21 (ENSPPYG00000002750) #36
Gibbon	MODERN SPECIES	18	PLEKHA1 (ENSNLEG00000016991) #7	ARMS2 (ENSNLEG00000016999) #8	HTRA1 (ENSNLEG00000017001) #9	ENSNLEG00000017018 #10	C10orf120 (ENSNLEG00000017025) #12	CUZD1 (ENSNLEG00000017027) #13	FAM24B (ENSNLEG00000028659) #14	ENSNLEG00000017042 ##16	FAM24A (ENSNLEG00000017045) #15	C10orf88 (ENSNLEG00000017047) #16	PSTK (ENSNLEG00000029733) #17	IKZF5 (ENSNLEG00000027055) #18	ACADSB (ENSNLEG00000026715) #19	HMX3 (ENSNLEG00000032860) #20	HMX2 (ENSNLEG00000033504) #21	BUB3 (ENSNLEG00000030093) #22	GPR26 (ENSNLEG00000030894) #23	ENSNLEG00000027584	CPXM2 (ENSNLEG00000017056) #24	ENSNLEG00000029527	CHST15 (ENSNLEG00000027714) #25	OAT (ENSNLEG00000000482) #26	LHPP (ENSNLEG00000000521) #28	FAM53B (ENSNLEG00000000535) #29	EEF1AKMT2 (ENSNLEG00000000539) #30	ABRAXAS2 (ENSNLEG00000000563) #31	ZRANB1 (ENSNLEG00000000584) #32	CTBP2 (ENSNLEG00000000608) #33	ENSNLEG00000035995	EDRF1 (ENSNLEG00000000623) #35	MMP21 (ENSNLEG00000000684) #36
Hominoidea	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.h ##22
Hominidae	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.h ##22
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.h ##22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.h ##22
Pan	ANCESTRAL SPECIES	13	ENSGT00940000155993	ENSGT00940000159404	ENSGT00940000158685	ENSGT00940000155480	ENSGT00940000157682.B	ENSGT00400000023684	ENSGT00890000139436.B	ENSGT00390000010382	ENSGT00390000005941	ENSGT00390000010292	ENSGT00390000013347.a	ENSGT00390000010852	ENSGT00940000155659	ENSGT00550000075044	ENSGT00940000160513	ENSGT00950000183091.A.a.h ##22	ENSGT00940000156246	ENSGT00940000162392.e	ENSGT00940000154738.a.k	ENSGT00910000148006	ENSGT00940000155419	ENSGT00940000162514	ENSGT00940000156003	ENSGT00550000074844	ENSGT01070000253775.a.d.a.a.a.b	ENSGT00510000047522	ENSGT01070000253775.a.d.a.a.a.a	ENSGT00390000011863.d	ENSGT00550000074907	ENSGT01050000244841.A.b.b.a	ENSGT00390000004586
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	20	TES (ENSPTRG00000023877)	TFEC (ENSPTRG00000047353)	MDFIC (ENSPTRG00000019609)	FOXP2 (ENSPTRG00000019608)	PPP1R3A (ENSPTRG00000019607)	SMIM30 (ENSPTRG00000051687)	ENSPTRG00000048811	BMT2 (ENSPTRG00000044767)	TMEM168 (ENSPTRG00000019604)	LSMEM1 (ENSPTRG00000019603)	IFRD1 (ENSPTRG00000019601)	ZNF277 (ENSPTRG00000024152)	DOCK4 (ENSPTRG00000019598)	LRRN3 (ENSPTRG00000028417)	IMMP2L (ENSPTRG00000019594)	ENSPTRG00000047546 ##22	DNAJB9 (ENSPTRG00000019593)	THAP5 (ENSPTRG00000019592)	PNPLA8 (ENSPTRG00000019590)	ENSPTRG00000044874	NRCAM (ENSPTRG00000019589)	LAMB4 (ENSPTRG00000019588)	LAMB1 (ENSPTRG00000019587)	DLD (ENSPTRG00000019585)	SLC26A3 (ENSPTRG00000022537)	CBLL1 (ENSPTRG00000019583)	SLC26A4 (ENSPTRG00000019581)	BCAP29 (ENSPTRG00000019580)	DUS4L (ENSPTRG00000019579)	GPR22 (ENSPTRG00000028426)	COG5 (ENSPTRG00000019577)
Chimpanzee	MODERN SPECIES	594																ENSPTRG00000052746 ##22	ENSPTRG00000045196	ENSPTRG00000047287	ENSPTRG00000048977	ENSPTRG00000051601
Bonobo	MODERN SPECIES	20	ENSPPAG00000004955	ENSPPAG00000027647	FOXP2 (ENSPPAG00000030868)	PPP1R3A (ENSPPAG00000041499)	SMIM30 (ENSPPAG00000019976)	ENSPPAG00000039584	BMT2 (ENSPPAG00000031398)	TMEM168 (ENSPPAG00000042305)	LSMEM1 (ENSPPAG00000020364)	IFRD1 (ENSPPAG00000042969)	ZNF277 (ENSPPAG00000029852)	DOCK4 (ENSPPAG00000040634)	ENSPPAG00000028203	LRRN3 (ENSPPAG00000010425)	ENSPPAG00000035378	ENSPPAG00000039101 ##22	DNAJB9 (ENSPPAG00000031489)	THAP5 (ENSPPAG00000043232)	ENSPPAG00000004251	PNPLA8 (ENSPPAG00000029848)	NRCAM (ENSPPAG00000035215)	LAMB4 (ENSPPAG00000038537)	LAMB1 (ENSPPAG00000028669)	DLD (ENSPPAG00000034095)	SLC26A3 (ENSPPAG00000019561)	CBLL1 (ENSPPAG00000039435)	SLC26A4 (ENSPPAG00000034905)	ENSPPAG00000043021	DUS4L (ENSPPAG00000031482)	GPR22 (ENSPPAG00000003684)	COG5 (ENSPPAG00000034477)
Gorilla	MODERN SPECIES	20	TES (ENSGGOG00000016067)	TFEC (ENSGGOG00000009901)	ENSGGOG00000042671	FOXP2 (ENSGGOG00000027435)	PPP1R3A (ENSGGOG00000005621)	SMIM30 (ENSGGOG00000003081)	ENSGGOG00000042174	BMT2 (ENSGGOG00000027197)	TMEM168 (ENSGGOG00000017194)	LSMEM1 (ENSGGOG00000016165)	IFRD1 (ENSGGOG00000000718)	ZNF277 (ENSGGOG00000005587)	DOCK4 (ENSGGOG00000004313)	LRRN3 (ENSGGOG00000026541)	ENSGGOG00000043490	ENSGGOG00000037528 ##22	DNAJB9 (ENSGGOG00000010754)	ENSGGOG00000041229	PNPLA8 (ENSGGOG00000010179)	ENSGGOG00000039809	NRCAM (ENSGGOG00000012271)	LAMB4 (ENSGGOG00000016757)	LAMB1 (ENSGGOG00000010725)	DLD (ENSGGOG00000002567)	SLC26A3 (ENSGGOG00000006523)	CBLL1 (ENSGGOG00000004921)	SLC26A4 (ENSGGOG00000034830)	ENSGGOG00000016205	DUS4L (ENSGGOG00000003821)	GPR22 (ENSGGOG00000024246)	COG5 (ENSGGOG00000043482)
Gibbon	MODERN SPECIES	3	ENSNLEG00000033212	FOXP2 (ENSNLEG00000011394)	PPP1R3A (ENSNLEG00000011388)	SMIM30 (ENSNLEG00000030553)	ENSNLEG00000032204	ENSNLEG00000034107	BMT2 (ENSNLEG00000011360)	TMEM168 (ENSNLEG00000011346)	LSMEM1 (ENSNLEG00000011338)	IFRD1 (ENSNLEG00000011280)	ZNF277 (ENSNLEG00000011240)	DOCK4 (ENSNLEG00000011076)	LRRN3 (ENSNLEG00000018600)	IMMP2L (ENSNLEG00000011071)	ENSNLEG00000035270	ENSNLEG00000033818 ##22	DNAJB9 (ENSNLEG00000008287)	THAP5 (ENSNLEG00000035889)	ENSNLEG00000008309	PNPLA8 (ENSNLEG00000008297)	ENSNLEG00000035557	NRCAM (ENSNLEG00000008311)	LAMB4 (ENSNLEG00000008405)	LAMB1 (ENSNLEG00000008501)	DLD (ENSNLEG00000008579)	SLC26A3 (ENSNLEG00000008644)	ENSNLEG00000008660	SLC26A4 (ENSNLEG00000008663)	ENSNLEG00000008699	DUS4L (ENSNLEG00000008716)	COG5 (ENSNLEG00000008738)
Cercopithecidae	DUPLICATION
Cercopithecidae	DUPLICATION
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00910000148049	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.i.a #22	ENSGT00950000183001.a.a #23	ENSGT00910000147603	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00910000147026	ENSGT00500000045038.y.a.a	ENSGT00390000012491 #34
Rhinopithecus	ANCESTRAL SPECIES	34	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00390000017384.h ##16	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00910000148049	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.i.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00910000147026	ENSGT00500000045038.y.a.a	ENSGT00390000012491 #34	ENSGT00950000182987.c.a.a.w
Black snub-nosed monkey	MODERN SPECIES	1932						C10orf120 (ENSRBIG00000038826) #12	CUZD1 (ENSRBIG00000037616) #13	ENSRBIG00000041773 ##16	FAM24A (ENSRBIG00000032405) #15	C10orf88 (ENSRBIG00000032338) #16	PSTK (ENSRBIG00000027947) #17	IKZF5 (ENSRBIG00000043135) #18	ACADSB (ENSRBIG00000037718) #19	HMX3 (ENSRBIG00000044171) #20	HMX2 (ENSRBIG00000042456) #21	ENSRBIG00000029979 #22	GPR26 (ENSRBIG00000014711) #23	CPXM2 (ENSRBIG00000028836) #24	CHST15 (ENSRBIG00000042844) #25	OAT (ENSRBIG00000020634) #26	NKX1-2 (ENSRBIG00000035041) #27	LHPP (ENSRBIG00000029121) #28	FAM53B (ENSRBIG00000035026) #29	EEF1AKMT2 (ENSRBIG00000032554) #30	ABRAXAS2 (ENSRBIG00000039178) #31	ENSRBIG00000028822	ZRANB1 (ENSRBIG00000012257) #32	CTBP2 (ENSRBIG00000041430) #33	ENSRBIG00000029543	ENSRBIG00000028389	TEX36 (ENSRBIG00000033525) #34
Golden snub-nosed monkey	MODERN SPECIES	813	BTBD16 (ENSRROG00000039453)	PLEKHA1 (ENSRROG00000034004) #7	HTRA1 (ENSRROG00000039096) #9	DMBT1 (ENSRROG00000037950) #10	C10orf120 (ENSRROG00000040542) #12	CUZD1 (ENSRROG00000034208) #13	FAM24B (ENSRROG00000044993) #14	FAM24A (ENSRROG00000025149) #15	C10orf88 (ENSRROG00000026348) #16	ENSRROG00000042113	PSTK (ENSRROG00000010210) #17	IKZF5 (ENSRROG00000023471) #18	ACADSB (ENSRROG00000042969) #19	HMX3 (ENSRROG00000039758) #20	HMX2 (ENSRROG00000038682) #21	ENSRROG00000043912 #22	GPR26 (ENSRROG00000034092) #23	CPXM2 (ENSRROG00000034798) #24	CHST15 (ENSRROG00000036235) #25	OAT (ENSRROG00000031943) #26	NKX1-2 (ENSRROG00000040338) #27	LHPP (ENSRROG00000042763) #28	FAM53B (ENSRROG00000038434) #29	EEF1AKMT2 (ENSRROG00000044657) #30	ABRAXAS2 (ENSRROG00000041463) #31	ZRANB1 (ENSRROG00000039732) #32	ENSRROG00000012768	CTBP2 (ENSRROG00000041660) #33	ENSRROG00000028949	ENSRROG00000031792	TEX36 (ENSRROG00000037669) #34
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00910000148049	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.i.a #22	ENSGT00950000183001.a.a #23	ENSGT00910000147603	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00910000147026	ENSGT00500000045038.y.a.a	ENSGT00390000012491 #34
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00910000148049	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.i.a #22	ENSGT00950000183001.a.a #23	ENSGT00910000147603	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00910000147026	ENSGT00500000045038.y.a.a	ENSGT00390000012491 #34
Macaca	ANCESTRAL SPECIES	11	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00910000148049	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.i.a #22	ENSGT00950000183001.a.a #23	ENSGT00910000147603	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00910000147026	ENSGT00500000045038.y.a.a	ENSGT00390000012491 #34
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00910000148049	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.i.a #22	ENSGT00950000183001.a.a #23	ENSGT00910000147603	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36
Rhesus	MODERN SPECIES	19	BTBD16 (ENSMMUG00000013038)	PLEKHA1 (ENSMMUG00000013040) #7	HTRA1 (ENSMMUG00000056637) #9	ENSMMUG00000065343 #10	ENSMMUG00000021138 #10	SPADH (ENSMMUG00000052634) #11	C9H10orf120 (ENSMMUG00000021140) #12	CUZD1 (ENSMMUG00000010458) #13	FAM24A (ENSMMUG00000057705) #15	C9H10orf88 (ENSMMUG00000008564) #16	PSTK (ENSMMUG00000017858) #17	IKZF5 (ENSMMUG00000023480) #18	ACADSB (ENSMMUG00000000684) #19	HMX3 (ENSMMUG00000003090) #20	HMX2 (ENSMMUG00000053104) #21	BUB3 (ENSMMUG00000003092) #22	GPR26 (ENSMMUG00000053995) #23	CPXM2 (ENSMMUG00000020346) #24	ENSMMUG00000056443	ENSMMUG00000046183	CHST15 (ENSMMUG00000010115) #25	OAT (ENSMMUG00000010485) #26	NKX1-2 (ENSMMUG00000054006) #27	LHPP (ENSMMUG00000015215) #28	FAM53B (ENSMMUG00000015216) #29	EEF1AKMT2 (ENSMMUG00000015217) #30	ABRAXAS2 (ENSMMUG00000012501) #31	ZRANB1 (ENSMMUG00000022028) #32	CTBP2 (ENSMMUG00000022032) #33	TEX36 (ENSMMUG00000021270) #34	EDRF1 (ENSMMUG00000008535) #35
Crab-eating macaque	MODERN SPECIES	19	ENSMFAG00000062863	DMBT1 (ENSMFAG00000003903) #10	SPADH (ENSMFAG00000049536) #11	C10orf120 (ENSMFAG00000041530) #12	ENSMFAG00000046495	CUZD1 (ENSMFAG00000033660) #13	FAM24B (ENSMFAG00000061971) #14	FAM24A (ENSMFAG00000060945) #15	C10orf88 (ENSMFAG00000062466) #16	ENSMFAG00000061411	ENSMFAG00000064549	PSTK (ENSMFAG00000036565) #17	IKZF5 (ENSMFAG00000046268) #18	ACADSB (ENSMFAG00000034302) #19	ENSMFAG00000041320 #21	BUB3 (ENSMFAG00000044849) #22	ENSMFAG00000053162	GPR26 (ENSMFAG00000056569) #23	CPXM2 (ENSMFAG00000002567) #24	ENSMFAG00000049060	CHST15 (ENSMFAG00000032966) #25	ENSMFAG00000038400 #26	NKX1-2 (ENSMFAG00000061403) #27	LHPP (ENSMFAG00000039017) #28	FAM53B (ENSMFAG00000030017) #29	ENSMFAG00000002265 #30	ABRAXAS2 (ENSMFAG00000035172) #31	ZRANB1 (ENSMFAG00000031080) #32	CTBP2 (ENSMFAG00000045892) #33	TEX36 (ENSMFAG00000000897) #34	EDRF1 (ENSMFAG00000003945) #35
Pig-tailed macaque	MODERN SPECIES	92	PLEKHA1 (ENSMNEG00000042304) #7	ARMS2 (ENSMNEG00000037085) #8	HTRA1 (ENSMNEG00000039398) #9	ENSMNEG00000035126 #10	C10orf120 (ENSMNEG00000032555) #12	CUZD1 (ENSMNEG00000033847) #13	FAM24B (ENSMNEG00000032458) #14	FAM24A (ENSMNEG00000039220) #15	C10orf88 (ENSMNEG00000033455) #16	ENSMNEG00000032659	PSTK (ENSMNEG00000029291) #17	IKZF5 (ENSMNEG00000036978) #18	ACADSB (ENSMNEG00000031260) #19	HMX3 (ENSMNEG00000043084) #20	HMX2 (ENSMNEG00000028435) #21	ENSMNEG00000000049 #22	GPR26 (ENSMNEG00000032420) #23	ENSMNEG00000012185	CPXM2 (ENSMNEG00000042070) #24	CHST15 (ENSMNEG00000036317) #25	OAT (ENSMNEG00000044251) #26	NKX1-2 (ENSMNEG00000036634) #27	LHPP (ENSMNEG00000028552) #28	FAM53B (ENSMNEG00000044479) #29	ENSMNEG00000024668	EEF1AKMT2 (ENSMNEG00000029600) #30	ABRAXAS2 (ENSMNEG00000040445) #31	ZRANB1 (ENSMNEG00000030081) #32	CTBP2 (ENSMNEG00000043278) #33	ENSMNEG00000020291	ENSMNEG00000045518
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00650000095054 #8	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.i.a #22	ENSGT00950000183001.a.a #23	ENSGT00910000147603	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00910000147026	ENSGT00500000045038.y.a.a	ENSGT00390000012491 #34
Olive baboon	MODERN SPECIES	2	BTBD16 (ENSPANG00000020479)	PLEKHA1 (ENSPANG00000020481) #7	HTRA1 (ENSPANG00000020482) #9	ENSPANG00000020483 #10	ENSPANG00000037364	SPADH (ENSPANG00000044363) #11	C10orf120 (ENSPANG00000046689) #12	CUZD1 (ENSPANG00000020487) #13	FAM24A (ENSPANG00000020495) #15	C10orf88 (ENSPANG00000020468) #16	PSTK (ENSPANG00000020470) #17	IKZF5 (ENSPANG00000020471) #18	ACADSB (ENSPANG00000020466) #19	HMX3 (ENSPANG00000046945) #20	HMX2 (ENSPANG00000043894) #21	ENSPANG00000020351 #22	GPR26 (ENSPANG00000020352) #23	CPXM2 (ENSPANG00000020354) #24	ENSPANG00000039743	CHST15 (ENSPANG00000020324) #25	ENSPANG00000041423	OAT (ENSPANG00000020327) #26	NKX1-2 (ENSPANG00000020330) #27	LHPP (ENSPANG00000020332) #28	FAM53B (ENSPANG00000045793) #29	EEF1AKMT2 (ENSPANG00000020335) #30	ABRAXAS2 (ENSPANG00000020336) #31	ENSPANG00000037231	ZRANB1 (ENSPANG00000020320) #32	CTBP2 (ENSPANG00000020276) #33	ENSPANG00000040973
Cercopithecinae_d	ANCESTRAL SPECIES	64	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00650000095054 #8	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.i.a #22	ENSGT00950000183001.a.a #23	ENSGT00910000147603	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00910000147026	ENSGT00500000045038.y.a.a	ENSGT00390000012491 #34
Drill	MODERN SPECIES	940						C10orf120 (ENSMLEG00000005272) #12	CUZD1 (ENSMLEG00000037045) #13	FAM24B (ENSMLEG00000036212) #14	FAM24A (ENSMLEG00000035854) #15	C10orf88 (ENSMLEG00000035517) #16	PSTK (ENSMLEG00000038765) #17	IKZF5 (ENSMLEG00000003315) #18	ACADSB (ENSMLEG00000040722) #19	HMX3 (ENSMLEG00000024699) #20	HMX2 (ENSMLEG00000012105) #21	ENSMLEG00000031080 #22	GPR26 (ENSMLEG00000038180) #23	ENSMLEG00000022267	CPXM2 (ENSMLEG00000033633) #24	CHST15 (ENSMLEG00000036608) #25	OAT (ENSMLEG00000032966) #26	NKX1-2 (ENSMLEG00000032679) #27	LHPP (ENSMLEG00000027663) #28	FAM53B (ENSMLEG00000035214) #29	EEF1AKMT2 (ENSMLEG00000036372) #30	ABRAXAS2 (ENSMLEG00000008136) #31	ZRANB1 (ENSMLEG00000039002) #32	CTBP2 (ENSMLEG00000044401) #33	ENSMLEG00000007460	ENSMLEG00000002979	TEX36 (ENSMLEG00000027814) #34
Sooty mangabey	MODERN SPECIES	527	BTBD16 (ENSCATG00000012464)	PLEKHA1 (ENSCATG00000005094) #7	ARMS2 (ENSCATG00000026311) #8	HTRA1 (ENSCATG00000038268) #9	DMBT1 (ENSCATG00000044187) #10	C10orf120 (ENSCATG00000033658) #12	ENSCATG00000036116	FAM24B (ENSCATG00000043992) #14	FAM24A (ENSCATG00000037982) #15	C10orf88 (ENSCATG00000038112) #16	PSTK (ENSCATG00000038639) #17	IKZF5 (ENSCATG00000035777) #18	ACADSB (ENSCATG00000035743) #19	HMX3 (ENSCATG00000037673) #20	HMX2 (ENSCATG00000017605) #21	ENSCATG00000045202 #22	ENSCATG00000012261	GPR26 (ENSCATG00000033714) #23	ENSCATG00000008393	CPXM2 (ENSCATG00000023297) #24	CHST15 (ENSCATG00000035207) #25	OAT (ENSCATG00000044088) #26	NKX1-2 (ENSCATG00000044548) #27	LHPP (ENSCATG00000045044) #28	FAM53B (ENSCATG00000038702) #29	EEF1AKMT2 (ENSCATG00000030673) #30	ABRAXAS2 (ENSCATG00000014044) #31	ZRANB1 (ENSCATG00000035796) #32	CTBP2 (ENSCATG00000043867) #33	ENSCATG00000029412	ENSCATG00000033653
Cercopithecidae	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.i.b #22
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.i.b #22
Cercopithecinae_a	ANCESTRAL SPECIES	15	ENSGT00940000153801.b	ENSGT00390000000521	ENSGT00390000006658.a.b	ENSGT00940000156113	ENSGT00910000147562	ENSGT00940000157532	ENSGT00390000009546.b	ENSGT00390000001688	ENSGT00940000154824.a	ENSGT00940000154968	ENSGT00950000182992.a.b.b	ENSGT00940000154635.a.c	ENSGT00940000162798	ENSGT00390000002200.a.b	ENSGT00940000162917	ENSGT00950000183091.A.a.i.b #22	ENSGT00940000160385	ENSGT00940000159435	ENSGT00940000161270	ENSGT00940000160659	ENSGT00390000015564.qb.b	ENSGT00940000157353	ENSGT00940000157414	ENSGT00940000156907	ENSGT00390000005651	ENSGT00940000159257	ENSGT00730000111180	ENSGT00950000182808.b.a	ENSGT00940000154634.c.ab.i	ENSGT00940000154634.c.ab.h.b	ENSGT00940000162398
Macaca	ANCESTRAL SPECIES	14	ENSGT00940000153801.b	ENSGT00390000000521	ENSGT00390000006658.a.b	ENSGT00940000156113	ENSGT00910000147562	ENSGT00940000157532	ENSGT00390000009546.b	ENSGT00390000001688	ENSGT00940000154824.a	ENSGT00940000154968	ENSGT00950000182992.a.b.b	ENSGT00940000154635.a.c	ENSGT00940000162798	ENSGT00390000002200.a.b	ENSGT00940000162917	ENSGT00950000183091.A.a.i.b #22	ENSGT00940000160385	ENSGT00940000159435	ENSGT00940000161270	ENSGT00940000160659	ENSGT00390000015564.qb.b	ENSGT00940000157353	ENSGT00940000157414	ENSGT00940000156907	ENSGT00390000005651	ENSGT00940000159257	ENSGT00730000111180	ENSGT00950000182808.b.a	ENSGT00940000154634.c.ab.i	ENSGT00910000148837	ENSGT00940000162398
Pig-tailed macaque	MODERN SPECIES	544	EXOSC3 (ENSMNEG00000037084)	TRMT10B (ENSMNEG00000033400)	FRMPD1 (ENSMNEG00000033935)	ENSMNEG00000036897	FBXO10 (ENSMNEG00000031629)	POLR1E (ENSMNEG00000040283)	ZBTB5 (ENSMNEG00000025214)	GRHPR (ENSMNEG00000040754)	CNGB3 (ENSMNEG00000039896)	CPNE3 (ENSMNEG00000029944)	RMDN1 (ENSMNEG00000029535)	WWP1 (ENSMNEG00000034846)	SLC7A13 (ENSMNEG00000036528)	ATP6V0D2 (ENSMNEG00000044983)	PSKH2 (ENSMNEG00000041703)	ENSMNEG00000013058 #22	CA2 (ENSMNEG00000037161)	CA3 (ENSMNEG00000030535)	CA1 (ENSMNEG00000038997)	CA13 (ENSMNEG00000031560)	ENSMNEG00000029224	E2F5 (ENSMNEG00000038970)	LRRCC1 (ENSMNEG00000038685)	RALYL (ENSMNEG00000033288)
Cercopithecinae_b	ANCESTRAL SPECIES	9	ENSGT00390000007813	ENSGT00950000183108.b.a.b	ENSGT00940000153801.b	ENSGT00390000000521	ENSGT00390000006658.a.b	ENSGT00940000156113	ENSGT00940000157532	ENSGT00390000001688	ENSGT00940000154824.a	ENSGT00940000154968	ENSGT00950000182992.a.b.b	ENSGT00940000154635.a.c	ENSGT00940000162798	ENSGT00390000002200.a.b	ENSGT00940000162917	ENSGT00950000183091.A.a.i.b #22	ENSGT00940000160385	ENSGT00940000159435	ENSGT00940000161270	ENSGT00940000160659	ENSGT00390000015564.pb	ENSGT00940000157353	ENSGT00940000157414	ENSGT00940000156907	ENSGT00390000005651	ENSGT00940000159257	ENSGT00730000111180	ENSGT00950000182808.b.a	ENSGT00940000154634.c.ab.h.b	ENSGT00940000154634.c.ab.i	ENSGT00940000162398
Olive baboon	MODERN SPECIES	18	RIPK2 (ENSPANG00000015171)	ENSPANG00000039820	MMP16 (ENSPANG00000010068)	DCAF4L2 (ENSPANG00000011397)	ENSPANG00000043218	ENSPANG00000045609	CNBD1 (ENSPANG00000034174)	ENSPANG00000039124	CNGB3 (ENSPANG00000021220)	CPNE3 (ENSPANG00000011828)	RMDN1 (ENSPANG00000011829)	WWP1 (ENSPANG00000019676)	SLC7A13 (ENSPANG00000009669)	ATP6V0D2 (ENSPANG00000022220)	PSKH2 (ENSPANG00000008746)	ENSPANG00000034225 #22	CA2 (ENSPANG00000017180)	CA3 (ENSPANG00000040364)	CA1 (ENSPANG00000019035)	CA13 (ENSPANG00000047659)	RBIS (ENSPANG00000021683)	E2F5 (ENSPANG00000014637)	LRRCC1 (ENSPANG00000005748)	RALYL (ENSPANG00000029305)	ENSPANG00000029827	SNX16 (ENSPANG00000021915)	CHMP4C (ENSPANG00000021865)	ZFAND1 (ENSPANG00000000979)	SLC10A5 (ENSPANG00000019392)	IMPA1 (ENSPANG00000015217)	ENSPANG00000015930
Cercopithecinae_d	ANCESTRAL SPECIES	31	ENSGT00390000007813	ENSGT00950000183108.b.a.b	ENSGT00940000153801.b	ENSGT00390000000521	ENSGT00390000006658.a.b	ENSGT00940000156113	ENSGT00940000157532	ENSGT00390000001688	ENSGT00940000154824.a	ENSGT00940000154968	ENSGT00950000182992.a.b.b	ENSGT00940000154635.a.c	ENSGT00940000162798	ENSGT00390000002200.a.b	ENSGT00940000162917	ENSGT00950000183091.A.a.i.b #22	ENSGT00940000160385	ENSGT00940000159435	ENSGT00940000161270	ENSGT00940000160659	ENSGT00390000015564.pb	ENSGT00940000157353	ENSGT00940000157414	ENSGT00940000156907	ENSGT00390000005651	ENSGT00940000159257	ENSGT00730000111180	ENSGT00950000182808.b.a	ENSGT00940000154634.c.ab.i	ENSGT00940000162398	ENSGT00940000160340.c
Sooty mangabey	MODERN SPECIES	397	CALB1 (ENSCATG00000041675)	DECR1 (ENSCATG00000029838)	NBN (ENSCATG00000033051)	OSGIN2 (ENSCATG00000036811)	RIPK2 (ENSCATG00000042899)	ENSCATG00000034840	MMP16 (ENSCATG00000039014)	CNBD1 (ENSCATG00000034178)	CNGB3 (ENSCATG00000030165)	CPNE3 (ENSCATG00000038568)	RMDN1 (ENSCATG00000015442)	WWP1 (ENSCATG00000031449)	SLC7A13 (ENSCATG00000041991)	ATP6V0D2 (ENSCATG00000032520)	PSKH2 (ENSCATG00000035667)	ENSCATG00000037505 #22	CA2 (ENSCATG00000031921)	CA3 (ENSCATG00000035345)	CA1 (ENSCATG00000044678)	CA13 (ENSCATG00000044249)	RBIS (ENSCATG00000028244)	E2F5 (ENSCATG00000032167)	LRRCC1 (ENSCATG00000012957)	RALYL (ENSCATG00000042145)	SNX16 (ENSCATG00000036805)	CHMP4C (ENSCATG00000043905)	ZFAND1 (ENSCATG00000012729)	SLC10A5 (ENSCATG00000020113)	ENSCATG00000022716	FABP12 (ENSCATG00000036511)	FABP9 (ENSCATG00000037644)
Drill	MODERN SPECIES	1562									ENSMLEG00000034273	CPNE3 (ENSMLEG00000035658)	RMDN1 (ENSMLEG00000033500)	WWP1 (ENSMLEG00000040614)	SLC7A13 (ENSMLEG00000040996)	ATP6V0D2 (ENSMLEG00000031783)	PSKH2 (ENSMLEG00000034406)	ENSMLEG00000036458 #22
Rhinopithecus	ANCESTRAL SPECIES	777													ENSGT00940000162798	ENSGT00390000002200.a.b	ENSGT00940000162917	ENSGT00950000183091.A.a.i.b #22
Black snub-nosed monkey	MODERN SPECIES	2488													SLC7A13 (ENSRBIG00000026501)	ATP6V0D2 (ENSRBIG00000041038)	PSKH2 (ENSRBIG00000041048)	ENSRBIG00000030400 #22
Golden snub-nosed monkey	MODERN SPECIES	1850														ATP6V0D2 (ENSRROG00000039258)	PSKH2 (ENSRROG00000037904)	ENSRROG00000043147 #22
Cercopithecidae	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.j #22
Cercopithecinae	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.j #22
Vervet Monkey	MODERN SPECIES	28	TACC2 (ENSCSAG00000004625)	BTBD16 (ENSCSAG00000004617)	PLEKHA1 (ENSCSAG00000004609) #7	HTRA1 (ENSCSAG00000004604) #9	ENSCSAG00000004600 #10	C10orf120 (ENSCSAG00000004594) #12	CUZD1 (ENSCSAG00000004585) #13	FAM24B (ENSCSAG00000004575) #14	FAM24A (ENSCSAG00000004571) #15	C10orf88 (ENSCSAG00000004568) #16	PSTK (ENSCSAG00000004563) #17	IKZF5 (ENSCSAG00000004558) #18	ACADSB (ENSCSAG00000004557) #19	HMX3 (ENSCSAG00000004552) #20	HMX2 (ENSCSAG00000004550) #21	BUB3 (ENSCSAG00000004547) #22	GPR26 (ENSCSAG00000004541) #23	CPXM2 (ENSCSAG00000004539) #24	CHST15 (ENSCSAG00000004534) #25	OAT (ENSCSAG00000004531) #26	NKX1-2 (ENSCSAG00000004528) #27	LHPP (ENSCSAG00000004526) #28	FAM53B (ENSCSAG00000004523) #29	EEF1AKMT2 (ENSCSAG00000004519) #30	ABRAXAS2 (ENSCSAG00000004517) #31	ZRANB1 (ENSCSAG00000004507) #32	ENSCSAG00000004503 #33	TEX36 (ENSCSAG00000004500) #34	EDRF1 (ENSCSAG00000004498) #35	MMP21 (ENSCSAG00000004494) #36	UROS (ENSCSAG00000004491) #37
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00390000017384.h ##16	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Cebidae	ANCESTRAL SPECIES	17	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Marmoset	MODERN SPECIES	3	HTRA1 (ENSCJAG00000001226) #9	ENSCJAG00000082859 #10	ENSCJAG00000001157 #10	SPADH (ENSCJAG00000067245) #11	C10orf120 (ENSCJAG00000012735) #12	ENSCJAG00000061021	CUZD1 (ENSCJAG00000001132) #13	FAM24B (ENSCJAG00000077353) #14	FAM24A (ENSCJAG00000086502) #15	C10orf88 (ENSCJAG00000001125) #16	PSTK (ENSCJAG00000001117) #17	IKZF5 (ENSCJAG00000065257) #18	ACADSB (ENSCJAG00000001092) #19	HMX3 (ENSCJAG00000085658) #20	HMX2 (ENSCJAG00000001081) #21	BUB3 (ENSCJAG00000001066) #22	GPR26 (ENSCJAG00000008190) #23	CPXM2 (ENSCJAG00000046273) #24	ENSCJAG00000082547	CHST15 (ENSCJAG00000010285) #25	ENSCJAG00000012633 #26	NKX1-2 (ENSCJAG00000068730) #27	LHPP (ENSCJAG00000012614) #28	FAM53B (ENSCJAG00000012593) #29	EEF1AKMT2 (ENSCJAG00000078355) #30	ABRAXAS2 (ENSCJAG00000068604) #31	ZRANB1 (ENSCJAG00000012573) #32	CTBP2 (ENSCJAG00000012539) #33	ENSCJAG00000074181	ENSCJAG00000079705	TEX36 (ENSCJAG00000071416) #34
Cebidae_a	ANCESTRAL SPECIES	13	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000154525.b.a #13	ENSGT00940000163005.d #14	ENSGT00940000163005.c #15	ENSGT00390000017384.g #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895.w #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Capuchin	MODERN SPECIES	235	NLRP12 (ENSCCAG00000037077)	ARMS2 (ENSCCAG00000038121) #8	HTRA1 (ENSCCAG00000028776) #9	ENSCCAG00000033744 #10	C10orf120 (ENSCCAG00000020897) #12	CUZD1 (ENSCCAG00000010094) #13	FAM24B (ENSCCAG00000033608) #14	FAM24A (ENSCCAG00000034029) #15	C10orf88 (ENSCCAG00000029118) #16	PSTK (ENSCCAG00000027813) #17	IKZF5 (ENSCCAG00000030805) #18	ENSCCAG00000028196	ACADSB (ENSCCAG00000025590) #19	HMX3 (ENSCCAG00000021254) #20	HMX2 (ENSCCAG00000027587) #21	BUB3 (ENSCCAG00000035243) #22	GPR26 (ENSCCAG00000023527) #23	CPXM2 (ENSCCAG00000029590) #24	CHST15 (ENSCCAG00000023027) #25	OAT (ENSCCAG00000022249) #26	NKX1-2 (ENSCCAG00000032391) #27	LHPP (ENSCCAG00000022256) #28	FAM53B (ENSCCAG00000032637) #29	EEF1AKMT2 (ENSCCAG00000003096) #30	ABRAXAS2 (ENSCCAG00000004279) #31	ENSCCAG00000034725	ZRANB1 (ENSCCAG00000022748) #32	CTBP2 (ENSCCAG00000001371) #33
Bolivian squirrel monkey	MODERN SPECIES	47	TACC2 (ENSSBOG00000034773)	BTBD16 (ENSSBOG00000030401)	PLEKHA1 (ENSSBOG00000032388) #7	HTRA1 (ENSSBOG00000022966) #9	ENSSBOG00000033598 #10	C10orf120 (ENSSBOG00000021674) #12	CUZD1 (ENSSBOG00000019778) #13	FAM24B (ENSSBOG00000034235) #14	FAM24A (ENSSBOG00000031885) #15	C10orf88 (ENSSBOG00000030071) #16	PSTK (ENSSBOG00000035695) #17	IKZF5 (ENSSBOG00000021900) #18	ACADSB (ENSSBOG00000026062) #19	HMX3 (ENSSBOG00000023320) #20	HMX2 (ENSSBOG00000021232) #21	BUB3 (ENSSBOG00000025883) #22	GPR26 (ENSSBOG00000029415) #23	CPXM2 (ENSSBOG00000036010) #24	CHST15 (ENSSBOG00000027985) #25	OAT (ENSSBOG00000020910) #26	NKX1-2 (ENSSBOG00000018166) #27	LHPP (ENSSBOG00000030027) #28	FAM53B (ENSSBOG00000025047) #29	EEF1AKMT2 (ENSSBOG00000023032) #30	ABRAXAS2 (ENSSBOG00000034509) #31	ZRANB1 (ENSSBOG00000034635) #32	CTBP2 (ENSSBOG00000033291) #33	TEX36 (ENSSBOG00000022299) #34	EDRF1 (ENSSBOG00000011981) #35	MMP21 (ENSSBOG00000020252) #36	UROS (ENSSBOG00000032791) #37
Mas night monkey	MODERN SPECIES	802	PLEKHA1 (ENSANAG00000026667) #7	ARMS2 (ENSANAG00000024354) #8	HTRA1 (ENSANAG00000023219) #9	ENSANAG00000030579 #10	C10orf120 (ENSANAG00000027570) #12	CUZD1 (ENSANAG00000021440) #13	FAM24B (ENSANAG00000020828) #14	ENSANAG00000018257 ##16	FAM24A (ENSANAG00000014047) #15	C10orf88 (ENSANAG00000020459) #16	PSTK (ENSANAG00000037855) #17	IKZF5 (ENSANAG00000032569) #18	ACADSB (ENSANAG00000029052) #19	HMX3 (ENSANAG00000024547) #20	HMX2 (ENSANAG00000036077) #21	BUB3 (ENSANAG00000034868) #22	GPR26 (ENSANAG00000025234) #23	CPXM2 (ENSANAG00000033303) #24	CHST15 (ENSANAG00000036170) #25	OAT (ENSANAG00000027976) #26	NKX1-2 (ENSANAG00000027849) #27	LHPP (ENSANAG00000030254) #28	FAM53B (ENSANAG00000023364) #29	EEF1AKMT2 (ENSANAG00000020212) #30	ABRAXAS2 (ENSANAG00000036240) #31	ZRANB1 (ENSANAG00000028845) #32	CTBP2 (ENSANAG00000023803) #33	TEX36 (ENSANAG00000020229) #34	EDRF1 (ENSANAG00000029305) #35	MMP21 (ENSANAG00000034665) #36	UROS (ENSANAG00000022312) #37
Tarsier	DUPLICATION
Tarsier	DUPLICATION
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	1508										CUNH10orf88 (ENSTSYG00000010949) #16	PSTK (ENSTSYG00000003369) #17	IKZF5 (ENSTSYG00000025749) #18	ACADSB (ENSTSYG00000013773) #19	ENSTSYG00000029811 #20	HMX2 (ENSTSYG00000013450) #21	BUB3 (ENSTSYG00000013444) #22	S100A6 (ENSTSYG00000029525)	S100A5 (ENSTSYG00000002003)	S100A4 (ENSTSYG00000030470)	S100A3 (ENSTSYG00000036785)	S100A2 (ENSTSYG00000027906)
Tarsier	MODERN SPECIES	6029															C8orf48 (ENSTSYG00000014003)	ENSTSYG00000033471 #22	DLC1 (ENSTSYG00000013817)	KIAA1456 (ENSTSYG00000029308)
Tarsier	MODERN SPECIES	6252																ENSTSYG00000036829 #22
Tarsier	MODERN SPECIES	5420																ENSTSYG00000028760 #22
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT01010000224541	ENSGT00940000162108.tb	ENSGT00940000162108.sb.a	ENSGT00940000162108.sb.b	ENSGT00940000154525.b.a #13	ENSGT00940000163005 #15	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT01010000224541	ENSGT00940000162108.tb	ENSGT00940000162108.sb.a	ENSGT00940000162108.sb.b	ENSGT00940000154525.b.a #13	ENSGT00390000017384.j #16	ENSGT00940000163005 #15	ENSGT00390000017384.i #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Lemuriformes_a	ANCESTRAL SPECIES	42	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT01010000224541	ENSGT00940000162108.tb	ENSGT00940000162108.sb.a	ENSGT00940000162108.sb.b	ENSGT00940000154525.b.a #13	ENSGT00940000163005 #15	ENSGT00390000017384.i #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Coquerels sifaka	MODERN SPECIES	258	NSMCE4A (ENSPCOG00000011420)	ENSPCOG00000026897	BTBD16 (ENSPCOG00000020204)	PLEKHA1 (ENSPCOG00000027097) #7	HTRA1 (ENSPCOG00000021590) #9	ENSPCOG00000015298 #10	C10orf120 (ENSPCOG00000020092) #12	CUZD1 (ENSPCOG00000026175) #13	ENSPCOG00000008575 #15	ENSPCOG00000018262 #16	PSTK (ENSPCOG00000015070) #17	IKZF5 (ENSPCOG00000024918) #18	ACADSB (ENSPCOG00000017961) #19	HMX3 (ENSPCOG00000004827) #20	HMX2 (ENSPCOG00000021307) #21	BUB3 (ENSPCOG00000024614) #22	GPR26 (ENSPCOG00000019047) #23	CPXM2 (ENSPCOG00000022596) #24	CHST15 (ENSPCOG00000028486) #25	OAT (ENSPCOG00000018744) #26	NKX1-2 (ENSPCOG00000021546) #27	LHPP (ENSPCOG00000022151) #28	FAM53B (ENSPCOG00000028062) #29	EEF1AKMT2 (ENSPCOG00000017778) #30	ABRAXAS2 (ENSPCOG00000013791) #31
Greater bamboo lemur	MODERN SPECIES	1025									ENSPSMG00000016359 #16	ENSPSMG00000016356 #16	PSTK (ENSPSMG00000016344) #17	IKZF5 (ENSPSMG00000016336) #18	ACADSB (ENSPSMG00000016312) #19	HMX3 (ENSPSMG00000016240) #20	HMX2 (ENSPSMG00000016234) #21	BUB3 (ENSPSMG00000016216) #22	GPR26 (ENSPSMG00000016141) #23	CPXM2 (ENSPSMG00000016129) #24	CHST15 (ENSPSMG00000016114) #25	OAT (ENSPSMG00000016089) #26	NKX1-2 (ENSPSMG00000016066) #27	LHPP (ENSPSMG00000016032) #28	FAM53B (ENSPSMG00000015965) #29
Mouse lemur	MODERN SPECIES	6	BTBD16 (ENSMICG00000009849)	PLEKHA1 (ENSMICG00000037532) #7	HTRA1 (ENSMICG00000009867) #9	ENSMICG00000037650	ENSMICG00000037150 #10	C10orf120 (ENSMICG00000008567) #12	CUZD1 (ENSMICG00000044009) #13	ENSMICG00000035025 #16	ENSMICG00000008610 #15	ENSMICG00000015190 #16	PSTK (ENSMICG00000005140) #17	IKZF5 (ENSMICG00000043450) #18	ACADSB (ENSMICG00000000462) #19	HMX3 (ENSMICG00000000467) #20	HMX2 (ENSMICG00000000468) #21	BUB3 (ENSMICG00000000469) #22	GPR26 (ENSMICG00000045590) #23	CPXM2 (ENSMICG00000008842) #24	CHST15 (ENSMICG00000008853) #25	OAT (ENSMICG00000003894) #26	NKX1-2 (ENSMICG00000046032) #27	LHPP (ENSMICG00000003900) #28	FAM53B (ENSMICG00000003907) #29	EEF1AKMT2 (ENSMICG00000029191) #30	ABRAXAS2 (ENSMICG00000031916) #31	ZRANB1 (ENSMICG00000000273) #32	CTBP2 (ENSMICG00000000275) #33	TEX36 (ENSMICG00000026931) #34	EDRF1 (ENSMICG00000006179) #35	MMP21 (ENSMICG00000006186) #36	UROS (ENSMICG00000006188) #37
Bushbaby	MODERN SPECIES	190								C10orf120 (ENSOGAG00000008685) #12	ENSOGAG00000030945	CUZD1 (ENSOGAG00000008700) #13	PSTK (ENSOGAG00000008707) #17	IKZF5 (ENSOGAG00000032070) #18	ACADSB (ENSOGAG00000008715) #19	HMX3 (ENSOGAG00000033826) #20	HMX2 (ENSOGAG00000011247) #21	BUB3 (ENSOGAG00000011249) #22	GPR26 (ENSOGAG00000015968) #23	CPXM2 (ENSOGAG00000015976) #24	CHST15 (ENSOGAG00000004496) #25	OAT (ENSOGAG00000011006) #26	LHPP (ENSOGAG00000011008) #28	FAM53B (ENSOGAG00000033416) #29	ENSOGAG00000011015 #30	ABRAXAS2 (ENSOGAG00000011022) #31	ZRANB1 (ENSOGAG00000008345) #32	ENSOGAG00000024152 ##33	TEX36 (ENSOGAG00000010883) #34	EDRF1 (ENSOGAG00000010889) #35	MMP21 (ENSOGAG00000010897) #36	UROS (ENSOGAG00000010900) #37	BCCIP (ENSOGAG00000010901)
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000165716	ENSGT00940000154525.b.a #13	ENSGT00940000164044	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00940000168312	ENSGT00390000014797 #35	ENSGT00940000159140.d #36
Tree shrew	MODERN SPECIES	4810																BUB3 (ENSTBEG00000014484) #22
Glires	ANCESTRAL SPECIES	16	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT01010000224541	ENSGT00940000162108.tb	ENSGT00940000165716	ENSGT00940000154525.b.a #13	ENSGT00940000171163	ENSGT00940000164044	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00940000168312	ENSGT00390000014797 #35	ENSGT00940000159140.d #36
Rodentia	ANCESTRAL SPECIES	16	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00390000005511 #12	ENSGT00950000183145.E #10	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f.g.b #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Sciuridae	ANCESTRAL SPECIES	21	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00390000005511 #12	ENSGT00950000183145.E #10	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f.g.b #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Marmotini	DUPLICATION
Marmotini	DUPLICATION
Marmotini	ANCESTRAL SPECIES	16	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157.k #7	ENSGT00940000156955 #9	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.m.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f.g.b #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Alpin marmot	MODERN SPECIES	53	ENSMMMG00000001271	ENSMMMG00000001553	BTBD16 (ENSMMMG00000001579)	ENSMMMG00000001679 #7	ENSMMMG00000001757	ENSMMMG00000001770 #9	ENSMMMG00000001790 ##10	C10orf120 (ENSMMMG00000001925) #12	ENSMMMG00000001938	ENSMMMG00000001979	CUZD1 (ENSMMMG00000001993) #13	PSTK (ENSMMMG00000002014) #17	IKZF5 (ENSMMMG00000002033) #18	ACADSB (ENSMMMG00000002052) #19	HMX2 (ENSMMMG00000002076) #21	ENSMMMG00000002090 #22	GPR26 (ENSMMMG00000002142) #23	CPXM2 (ENSMMMG00000002158) #24	CHST15 (ENSMMMG00000002233) #25	OAT (ENSMMMG00000002258) #26	LHPP (ENSMMMG00000002272) #28	FAM53B (ENSMMMG00000002296) #29	ENSMMMG00000002319 #30	ABRAXAS2 (ENSMMMG00000002355) #31	ZRANB1 (ENSMMMG00000002368) #32	CTBP2 (ENSMMMG00000002426) #33	EDRF1 (ENSMMMG00000002477) #35	MMP21 (ENSMMMG00000002600) #36	UROS (ENSMMMG00000002640) #37	ENSMMMG00000002705	DHX32 (ENSMMMG00000002778)
Marmotini_b	ANCESTRAL SPECIES	27	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157.k #7	ENSGT00940000156955 #9	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.m.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f.g.b #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Squirrel	MODERN SPECIES	86	NSMCE4A (ENSSTOG00000011112)	ENSSTOG00000022252	BTBD16 (ENSSTOG00000015270)	ENSSTOG00000010191 #7	HTRA1 (ENSSTOG00000026475) #9	ENSSTOG00000034031	ENSSTOG00000026812	CUZD1 (ENSSTOG00000008183) #13	ENSSTOG00000030864	ENSSTOG00000033040 #16	PSTK (ENSSTOG00000006955) #17	IKZF5 (ENSSTOG00000028669) #18	ACADSB (ENSSTOG00000006965) #19	HMX3 (ENSSTOG00000003981) #20	HMX2 (ENSSTOG00000000994) #21	ENSSTOG00000021785 #22	GPR26 (ENSSTOG00000026881) #23	CPXM2 (ENSSTOG00000020281) #24	CHST15 (ENSSTOG00000020654) #25	OAT (ENSSTOG00000004524) #26	NKX1-2 (ENSSTOG00000021286) #27	LHPP (ENSSTOG00000021871) #28	FAM53B (ENSSTOG00000004536) #29	EEF1AKMT2 (ENSSTOG00000031706) #30	ENSSTOG00000031920	ABRAXAS2 (ENSSTOG00000029214) #31	ZRANB1 (ENSSTOG00000014180) #32	CTBP2 (ENSSTOG00000014199) #33	TEX36 (ENSSTOG00000008384) #34	EDRF1 (ENSSTOG00000011796) #35	MMP21 (ENSSTOG00000011810) #36
Marmotini	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.m.b #22
Alpin marmot	MODERN SPECIES	2	ENSMMMG00000014803	ENSMMMG00000014777	ENSMMMG00000014760	SLC16A10 (ENSMMMG00000014746)	RPF2 (ENSMMMG00000014732)	ENSMMMG00000014718	CDK19 (ENSMMMG00000014687)	SLC22A16 (ENSMMMG00000014660)	DDO (ENSMMMG00000014615)	METTL24 (ENSMMMG00000014600)	CDC40 (ENSMMMG00000014580)	ENSMMMG00000014554	GPR6 (ENSMMMG00000014540)	FIG4 (ENSMMMG00000014523)	ENSMMMG00000014502	ENSMMMG00000014484 #22	ENSMMMG00000014463	ZBTB24 (ENSMMMG00000014455)	MICAL1 (ENSMMMG00000014375)	SMPD2 (ENSMMMG00000014360)	PPIL6 (ENSMMMG00000014353)	ENSMMMG00000014239	ENSMMMG00000014119	CEP57L1 (ENSMMMG00000014071)	SESN1 (ENSMMMG00000014034)	ARMC2 (ENSMMMG00000013988)	ENSMMMG00000013982	ENSMMMG00000013964	AFG1L (ENSMMMG00000013948)	ENSMMMG00000013918	NR2E1 (ENSMMMG00000013897)
Marmotini_b	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.m.b #22
Squirrel	MODERN SPECIES	164			ENSSTOG00000030235	ENSSTOG00000012726	SLC16A10 (ENSSTOG00000023508)	RPF2 (ENSSTOG00000013114)	GTF3C6 (ENSSTOG00000013106)	ENSSTOG00000000205	CDK19 (ENSSTOG00000024165)	DDO (ENSSTOG00000006021)	METTL24 (ENSSTOG00000006015)	CDC40 (ENSSTOG00000024426)	ENSSTOG00000005949	GPR6 (ENSSTOG00000011502)	FIG4 (ENSSTOG00000011494)	ENSSTOG00000030456 #22	ENSSTOG00000011481	ZBTB24 (ENSSTOG00000011460)	MICAL1 (ENSSTOG00000011447)	SMPD2 (ENSSTOG00000028661)	PPIL6 (ENSSTOG00000011426)	ENSSTOG00000011417	CEP57L1 (ENSSTOG00000019505)	SESN1 (ENSSTOG00000011391)	ENSSTOG00000000896	ENSSTOG00000032092	ENSSTOG00000021457	ENSSTOG00000022339	AFG1L (ENSSTOG00000001115)	SNX3 (ENSSTOG00000007274)	NR2E1 (ENSSTOG00000007248)
Marmotini	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.n #22
Marmotini_b	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.n #22
Arctic ground squirrel	MODERN SPECIES	28	BTBD16 (ENSUPAG00010004978)	ENSUPAG00010004971	ENSUPAG00010004924 #7	HTRA1 (ENSUPAG00010004911) #9	ENSUPAG00010004901 #12	ENSUPAG00010004894	ENSUPAG00010004857 #10	CUZD1 (ENSUPAG00010004852) #13	ENSUPAG00010004845	ENSUPAG00010004823 #16	PSTK (ENSUPAG00010004819) #17	IKZF5 (ENSUPAG00010004809) #18	ACADSB (ENSUPAG00010004778) #19	HMX3 (ENSUPAG00010004771) #20	HMX2 (ENSUPAG00010004763) #21	BUB3 (ENSUPAG00010004752) #22	GPR26 (ENSUPAG00010004746) #23	CPXM2 (ENSUPAG00010004732) #24	CHST15 (ENSUPAG00010004726) #25	OAT (ENSUPAG00010004703) #26	NKX1-2 (ENSUPAG00010004701) #27	LHPP (ENSUPAG00010004693) #28	FAM53B (ENSUPAG00010004683) #29	ENSUPAG00010004677	EEF1AKMT2 (ENSUPAG00010004656) #30	ABRAXAS2 (ENSUPAG00010004640) #31	ENSUPAG00010004631	ZRANB1 (ENSUPAG00010004606) #32	CTBP2 (ENSUPAG00010004547) #33	TEX36 (ENSUPAG00010004543) #34	EDRF1 (ENSUPAG00010004494) #35
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005001346	PLEKHA1 (ENSSVLG00005001323) #7	HTRA1 (ENSSVLG00005001280) #9	ENSSVLG00005001252 #12	ENSSVLG00005001198 #10	ENSSVLG00005001120	CUZD1 (ENSSVLG00005001077) #13	ENSSVLG00005001055 #16	ENSSVLG00005001041	ENSSVLG00005001016 #16	PSTK (ENSSVLG00005000980) #17	IKZF5 (ENSSVLG00005000956) #18	ACADSB (ENSSVLG00005000924) #19	HMX3 (ENSSVLG00005000902) #20	HMX2 (ENSSVLG00005000888) #21	BUB3 (ENSSVLG00005000858) #22	ENSSVLG00005000813	GPR26 (ENSSVLG00005000793) #23	CPXM2 (ENSSVLG00005000773) #24	ENSSVLG00005000742	CHST15 (ENSSVLG00005000708) #25	ENSSVLG00005000651 #26	NKX1-2 (ENSSVLG00005000624) #27	LHPP (ENSSVLG00005000583) #28	FAM53B (ENSSVLG00005000544) #29	EEF1AKMT2 (ENSSVLG00005000510) #30	ABRAXAS2 (ENSSVLG00005000473) #31	ZRANB1 (ENSSVLG00005000426) #32	CTBP2 (ENSSVLG00005000348) #33	TEX36 (ENSSVLG00005000280) #34	EDRF1 (ENSSVLG00005000243) #35
Hystricomorpha	DUPLICATION
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.o #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f.g.b #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035.e.a #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.o #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f.g.b #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Guinea pig	MODERN SPECIES	1	FGFR2 (ENSCPOG00000008833)	ATE1 (ENSCPOG00000025966)	NSMCE4A (ENSCPOG00000000625)	ENSCPOG00000000626	BTBD16 (ENSCPOG00000000630)	PLEKHA1 (ENSCPOG00000000631) #7	HTRA1 (ENSCPOG00000000632) #9	ENSCPOG00000001267	CUZD1 (ENSCPOG00000003649) #13	C10orf88 (ENSCPOG00000006675) #16	PSTK (ENSCPOG00000030265) #17	ENSCPOG00000037527 #18	ACADSB (ENSCPOG00000012372) #19	HMX3 (ENSCPOG00000011950) #20	HMX2 (ENSCPOG00000032283) #21	BUB3 (ENSCPOG00000011957) #22	GPR26 (ENSCPOG00000037735) #23	CPXM2 (ENSCPOG00000009383) #24	CHST15 (ENSCPOG00000038052) #25	OAT (ENSCPOG00000010340) #26	LHPP (ENSCPOG00000005337) #28	FAM53B (ENSCPOG00000005340) #29	EEF1AKMT2 (ENSCPOG00000005341) #30	ENSCPOG00000005342 #31	ZRANB1 (ENSCPOG00000008391) #32	CTBP2 (ENSCPOG00000008397) #33	TEX36 (ENSCPOG00000004817) #34	EDRF1 (ENSCPOG00000004826) #35	MMP21 (ENSCPOG00000004833) #36	UROS (ENSCPOG00000004834) #37	BCCIP (ENSCPOG00000006438)
Hystricomorpha_b	ANCESTRAL SPECIES	14	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035.e.a #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.o #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f.g.b #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Degu	DUPLICATION
Degu	MODERN SPECIES	51	ENSODEG00000017758	BTBD16 (ENSODEG00000017181)	ENSODEG00000017646	ENSODEG00000017854 #7	HTRA1 (ENSODEG00000017523) #9	ENSODEG00000017538 #10	ENSODEG00000017508	ENSODEG00000017380	CUZD1 (ENSODEG00000017550) #13	C10orf88 (ENSODEG00000017572) #16	PSTK (ENSODEG00000017417) #17	ENSODEG00000017599 #18	ACADSB (ENSODEG00000017347) #19	HMX3 (ENSODEG00000017303) #20	HMX2 (ENSODEG00000017125) #21	ENSODEG00000017376 #22	ENSODEG00000020472	GPR26 (ENSODEG00000017488) #23	CPXM2 (ENSODEG00000017290) #24	CHST15 (ENSODEG00000017382) #25	ENSODEG00000017605	ENSODEG00000017421 #26	ENSODEG00000017371	NKX1-2 (ENSODEG00000017123) #27	LHPP (ENSODEG00000017592) #28	FAM53B (ENSODEG00000017219) #29	EEF1AKMT2 (ENSODEG00000017201) #30	ENSODEG00000020434	ENSODEG00000017504 #31	ZRANB1 (ENSODEG00000017463) #32	ENSODEG00000017299 #33
Degu	MODERN SPECIES	60				IGFBP7 (ENSODEG00000009387)	POLR2B (ENSODEG00000009625)	NOA1 (ENSODEG00000010143)	ENSODEG00000011050	ENSODEG00000010125	ENSODEG00000009942	ENSODEG00000009707	ENSODEG00000010775	ENSODEG00000010672	HOPX (ENSODEG00000010206)	ENSODEG00000010470	ENSODEG00000009952	ENSODEG00000010449 #22	SRP72 (ENSODEG00000012214)	ENSODEG00000009422	PPAT (ENSODEG00000009426)	AASDH (ENSODEG00000011546)	ENSODEG00000010954	CEP135 (ENSODEG00000010808)	EXOC1 (ENSODEG00000010280)	EXOC1L (ENSODEG00000011413)	NMU (ENSODEG00000010066)	PDCL2 (ENSODEG00000009736)	CLOCK (ENSODEG00000009397)	TMEM165 (ENSODEG00000009162)	SRD5A3 (ENSODEG00000009796)	ENSODEG00000012100	KDR (ENSODEG00000009430)
Long-tailed chinchilla	MODERN SPECIES	184	NSMCE4A (ENSCLAG00000002459)	TACC2 (ENSCLAG00000002687)	BTBD16 (ENSCLAG00000005827)	PLEKHA1 (ENSCLAG00000006674) #7	HTRA1 (ENSCLAG00000002509) #9	ENSCLAG00000002836	CUZD1 (ENSCLAG00000003061) #13	ENSCLAG00000002221	ENSCLAG00000002572	C10orf88 (ENSCLAG00000002628) #16	PSTK (ENSCLAG00000002960) #17	ENSCLAG00000002888 #18	ACADSB (ENSCLAG00000003369) #19	HMX3 (ENSCLAG00000004802) #20	HMX2 (ENSCLAG00000005166) #21	BUB3 (ENSCLAG00000005834) #22	GPR26 (ENSCLAG00000001930) #23	CPXM2 (ENSCLAG00000001957) #24	CHST15 (ENSCLAG00000002182) #25	ENSCLAG00000002303	OAT (ENSCLAG00000003848) #26	NKX1-2 (ENSCLAG00000004174) #27	LHPP (ENSCLAG00000004436) #28	FAM53B (ENSCLAG00000003033) #29	EEF1AKMT2 (ENSCLAG00000003615) #30	ABRAXAS2 (ENSCLAG00000003508) #31	ZRANB1 (ENSCLAG00000003775) #32	CTBP2 (ENSCLAG00000004983) #33	TEX36 (ENSCLAG00000002643) #34	EDRF1 (ENSCLAG00000002765) #35	MMP21 (ENSCLAG00000010900) #36
Naked mole-rat female	MODERN SPECIES	4	SLF2 (ENSHGLG00000011302)	ENSHGLG00000033080	PAX2 (ENSHGLG00000007584)	HIF1AN (ENSHGLG00000008386)	ENSHGLG00000039278	ENSHGLG00000006335	ENSHGLG00000049539	ENSHGLG00000004047	ENSHGLG00000048517	ENSHGLG00000039463 #16	ENSHGLG00000018111 #17	IKZF5 (ENSHGLG00000043894) #18	ACADSB (ENSHGLG00000016362) #19	HMX3 (ENSHGLG00000018386) #20	HMX2 (ENSHGLG00000042092) #21	BUB3 (ENSHGLG00000012641) #22	GPR26 (ENSHGLG00000032021) #23	CPXM2 (ENSHGLG00000013494) #24	CHST15 (ENSHGLG00000010199) #25	OAT (ENSHGLG00000009823) #26	NKX1-2 (ENSHGLG00000014909) #27	LHPP (ENSHGLG00000037777) #28	ENSHGLG00000036038	FAM53B (ENSHGLG00000045048) #29	EEF1AKMT2 (ENSHGLG00000036735) #30	ENSHGLG00000042876 #31	ZRANB1 (ENSHGLG00000013127) #32	ENSHGLG00000010849 ##33	TEX36 (ENSHGLG00000046213) #34	EDRF1 (ENSHGLG00000012871) #35	UROS (ENSHGLG00000016055) #37
Hystricomorpha	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.p #22
Hystricomorpha_a	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.p #22
Hystricomorpha_b	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.p #22
Degu	MODERN SPECIES	158	AMOT (ENSODEG00000011962)	LHFPL1 (ENSODEG00000012333)	TRPC5 (ENSODEG00000015042)	ENSODEG00000011583	SERTM2 (ENSODEG00000020055)	DCX (ENSODEG00000012450)	ENSODEG00000013976	CAPN6 (ENSODEG00000012108)	PAK3 (ENSODEG00000012531)	ENSODEG00000013633	CHRDL1 (ENSODEG00000011617)	ENSODEG00000012689	ENSODEG00000012624	AMMECR1 (ENSODEG00000012719)	TMEM164 (ENSODEG00000013344)	ENSODEG00000013425 #22	ENSODEG00000012447	ENSODEG00000020116	ACSL4 (ENSODEG00000013319)	NXT2 (ENSODEG00000012049)	ENSODEG00000020053	GUCY2F (ENSODEG00000013232)
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Kangaroo rat	MODERN SPECIES	377	Ate1 (ENSDORG00000011669)	Nsmce4a (ENSDORG00000003880)	ENSDORG00000003881	Btbd16 (ENSDORG00000005110)	Plekha1 (ENSDORG00000024017) #7	Htra1 (ENSDORG00000015731) #9	ENSDORG00000007072	Cuzd1 (ENSDORG00000007077) #13	Fam24a (ENSDORG00000010469)	2310057M21Rik (ENSDORG00000028211) #16	Pstk (ENSDORG00000011804) #17	Ikzf5 (ENSDORG00000030138) #18	Acadsb (ENSDORG00000001496) #19	Hmx3 (ENSDORG00000002862) #20	Hmx2 (ENSDORG00000028020) #21	Bub3 (ENSDORG00000002864) #22	Gpr26 (ENSDORG00000013184) #23	Cpxm2 (ENSDORG00000013185) #24	Chst15 (ENSDORG00000025969) #25	Oat (ENSDORG00000013083) #26	Lhpp (ENSDORG00000009409) #28	Fam53b (ENSDORG00000029982) #29	Eef1akmt2 (ENSDORG00000016286) #30	Abraxas2 (ENSDORG00000015413) #31	Zranb1 (ENSDORG00000010679) #32	ENSDORG00000026871 ##33	Tex36 (ENSDORG00000012145) #34	Edrf1 (ENSDORG00000012147) #35	Mmp21 (ENSDORG00000012150) #36	Uros (ENSDORG00000012151) #37	Bccip (ENSDORG00000008005)
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00940000171163	ENSGT00940000164044.a	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00940000154430.e.b ##33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.a	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00940000154430.e.b ##33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36
Northern American deer mouse	MODERN SPECIES		Btbd16 (ENSPEMG00000021258)	Plekha1 (ENSPEMG00000021169) #7	Htra1 (ENSPEMG00000022401) #9	ENSPEMG00000028257 #10	ENSPEMG00000024600 #10	4933402N03Rik (ENSPEMG00000021538) #12	Cdcp3 (ENSPEMG00000020751)	Cuzd1 (ENSPEMG00000022588) #13	Fam24a (ENSPEMG00000031419)	2310057M21Rik (ENSPEMG00000020879) #16	Pstk (ENSPEMG00000020718) #17	Ikzf5 (ENSPEMG00000025067) #18	Acadsb (ENSPEMG00000023029) #19	Hmx3 (ENSPEMG00000020746) #20	Hmx2 (ENSPEMG00000020567) #21	Bub3 (ENSPEMG00000022008) #22	Gpr26 (ENSPEMG00000021661) #23	Cpxm2 (ENSPEMG00000010409) #24	Chst15 (ENSPEMG00000025384) #25	Oat (ENSPEMG00000000214) #26	Nkx1-2 (ENSPEMG00000029119) #27	Lhpp (ENSPEMG00000025159) #28	Fam53b (ENSPEMG00000021254) #29	Eef1akmt2 (ENSPEMG00000012513) #30	Abraxas2 (ENSPEMG00000000943) #31	Zranb1 (ENSPEMG00000021601) #32	Ctbp2 (ENSPEMG00000016006) #33	ENSPEMG00000025858	Tex36 (ENSPEMG00000028129) #34	Edrf1 (ENSPEMG00000020993) #35	Mmp21 (ENSPEMG00000022056) #36
Prairie vole	MODERN SPECIES	16	Nsmce4a (ENSMOCG00000010931)	ENSMOCG00000005035	Btbd16 (ENSMOCG00000019789)	Plekha1 (ENSMOCG00000017137) #7	Htra1 (ENSMOCG00000022155) #9	4933402N03Rik (ENSMOCG00000021499) #12	ENSMOCG00000002270	ENSMOCG00000015698	Cuzd1 (ENSMOCG00000019620) #13	2310057M21Rik (ENSMOCG00000017003) #16	Pstk (ENSMOCG00000020657) #17	Ikzf5 (ENSMOCG00000012731) #18	Acadsb (ENSMOCG00000014741) #19	Hmx3 (ENSMOCG00000017634) #20	Hmx2 (ENSMOCG00000019525) #21	Bub3 (ENSMOCG00000022149) #22	Gpr26 (ENSMOCG00000010123) #23	Cpxm2 (ENSMOCG00000016240) #24	Chst15 (ENSMOCG00000000598) #25	Oat (ENSMOCG00000020929) #26	Nkx1-2 (ENSMOCG00000000486) #27	Lhpp (ENSMOCG00000011963) #28	Fam53b (ENSMOCG00000021588) #29	Eef1akmt2 (ENSMOCG00000015688) #30	Abraxas2 (ENSMOCG00000001436) #31	Zranb1 (ENSMOCG00000013623) #32	ENSMOCG00000001972 ##33	Tex36 (ENSMOCG00000009219) #34	Edrf1 (ENSMOCG00000018530) #35	Mmp21 (ENSMOCG00000010101) #36	Uros (ENSMOCG00000013059) #37
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00940000171163	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Golden Hamster	MODERN SPECIES	78																Bub3 (ENSMAUG00000018370) #22
Chinese hamster chok1gshd	MODERN SPECIES	401	ENSCGRG00001021443	Btbd16 (ENSCGRG00001003604)	Plekha1 (ENSCGRG00001014871) #7	Htra1 (ENSCGRG00001020772) #9	4933402N03Rik (ENSCGRG00001021980) #12	ENSCGRG00001005841	Cuzd1 (ENSCGRG00001016877) #13	ENSCGRG00001021611	ENSCGRG00001010191	2310057M21Rik (ENSCGRG00001022004) #16	Pstk (ENSCGRG00001019704) #17	Ikzf5 (ENSCGRG00001000240) #18	Acadsb (ENSCGRG00001013507) #19	Hmx3 (ENSCGRG00001013357) #20	Hmx2 (ENSCGRG00001013576) #21	Bub3 (ENSCGRG00001014854) #22	ENSCGRG00001022673	Gpr26 (ENSCGRG00001000638) #23	Cpxm2 (ENSCGRG00001010429) #24	Chst15 (ENSCGRG00001015965) #25	Oat (ENSCGRG00001013711) #26	Nkx1-2 (ENSCGRG00001018225) #27	Lhpp (ENSCGRG00001021039) #28	Fam53b (ENSCGRG00001015896) #29	Eef1akmt2 (ENSCGRG00001018428) #30	Abraxas2 (ENSCGRG00001020558) #31	Zranb1 (ENSCGRG00001024189) #32	Ctbp2 (ENSCGRG00001017809) #33	Tex36 (ENSCGRG00001008694) #34	Edrf1 (ENSCGRG00001011728) #35	Mmp21 (ENSCGRG00001021076) #36
Murinae	ANCESTRAL SPECIES		ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Mus	ANCESTRAL SPECIES		ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Mus_B	ANCESTRAL SPECIES		ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Mouse	MODERN SPECIES	16	Btbd16 (ENSMUSG00000040298)	Plekha1 (ENSMUSG00000040268) #7	Htra1 (ENSMUSG00000006205) #9	Dmbt1 (ENSMUSG00000047517) #10	4933402N03Rik (ENSMUSG00000013668) #12	Cdcp3 (ENSMUSG00000006204)	Cuzd1 (ENSMUSG00000040205) #13	Fam24b (ENSMUSG00000030858)	Fam24a (ENSMUSG00000030859)	2310057M21Rik (ENSMUSG00000040177) #16	Pstk (ENSMUSG00000063179) #17	Ikzf5 (ENSMUSG00000040167) #18	Acadsb (ENSMUSG00000030861) #19	Hmx3 (ENSMUSG00000040148) #20	Hmx2 (ENSMUSG00000050100) #21	Bub3 (ENSMUSG00000066979) #22	Gpr26 (ENSMUSG00000040125) #23	Cpxm2 (ENSMUSG00000030862) #24	Chst15 (ENSMUSG00000030930) #25	Oat (ENSMUSG00000030934) #26	Nkx1-2 (ENSMUSG00000048528) #27	Lhpp (ENSMUSG00000030946) #28	Fam53b (ENSMUSG00000030956) #29	Eef1akmt2 (ENSMUSG00000030960) #30	Abraxas2 (ENSMUSG00000030965) #31	Zranb1 (ENSMUSG00000030967) #32	Ctbp2 (ENSMUSG00000030970) #33	Tex36 (ENSMUSG00000030976) #34	Edrf1 (ENSMUSG00000039990) #35	Mmp21 (ENSMUSG00000030981) #36	Uros (ENSMUSG00000030979) #37
Mus_C	ANCESTRAL SPECIES	14	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000164044.b	ENSGT00940000164044.a	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Steppe mouse	MODERN SPECIES	3376				ENSMSIG00000023009	4933402N03Rik (ENSMSIG00000023017) #12	Cdcp3 (ENSMSIG00000023024)	ENSMSIG00000023221	Cuzd1 (ENSMSIG00000023224) #13	Fam24a (ENSMSIG00000023252)	2310057M21Rik (ENSMSIG00000023267) #16	Pstk (ENSMSIG00000023289) #17	Ikzf5 (ENSMSIG00000023302) #18	Acadsb (ENSMSIG00000023317) #19	Hmx3 (ENSMSIG00000023372) #20	Hmx2 (ENSMSIG00000023379) #21	Bub3 (ENSMSIG00000023396) #22	ENSMSIG00000023462	Gpr26 (ENSMSIG00000023472) #23	Cpxm2 (ENSMSIG00000023477) #24	Chst15 (ENSMSIG00000023493) #25	ENSMSIG00000023527	ENSMSIG00000023534 #26	Nkx1-2 (ENSMSIG00000023549) #27	Lhpp (ENSMSIG00000023563) #28	Fam53b (ENSMSIG00000023591) #29	Eef1akmt2 (ENSMSIG00000023639) #30	Abraxas2 (ENSMSIG00000023665) #31	Zranb1 (ENSMSIG00000023686) #32	Ctbp2 (ENSMSIG00000023710) #33	Tex36 (ENSMSIG00000023776) #34	Edrf1 (ENSMSIG00000023786) #35
spretus	MODERN SPECIES	16	Tacc2 (MGP_SPRETEiJ_G0031672)	Btbd16 (MGP_SPRETEiJ_G0031673)	Plekha1 (MGP_SPRETEiJ_G0031674) #7	Htra1 (MGP_SPRETEiJ_G0031675) #9	4933402N03Rik (MGP_SPRETEiJ_G0031676) #12	MGP_SPRETEiJ_G0031677	Cuzd1 (MGP_SPRETEiJ_G0031678) #13	Fam24b (MGP_SPRETEiJ_G0031679)	Fam24a (MGP_SPRETEiJ_G0031680)	2310057M21Rik (MGP_SPRETEiJ_G0031681) #16	Pstk (MGP_SPRETEiJ_G0031682) #17	Ikzf5 (MGP_SPRETEiJ_G0031683) #18	Acadsb (MGP_SPRETEiJ_G0031684) #19	Hmx3 (MGP_SPRETEiJ_G0031685) #20	Hmx2 (MGP_SPRETEiJ_G0031686) #21	Bub3 (MGP_SPRETEiJ_G0031687) #22	Gpr26 (MGP_SPRETEiJ_G0031688) #23	Cpxm2 (MGP_SPRETEiJ_G0031689) #24	Chst15 (MGP_SPRETEiJ_G0031690) #25	Oat (MGP_SPRETEiJ_G0031691) #26	Nkx1-2 (MGP_SPRETEiJ_G0031692) #27	Lhpp (MGP_SPRETEiJ_G0031693) #28	Fam53b (MGP_SPRETEiJ_G0031694) #29	Eef1akmt2 (MGP_SPRETEiJ_G0031695) #30	Abraxas2 (MGP_SPRETEiJ_G0031696) #31	Zranb1 (MGP_SPRETEiJ_G0031697) #32	Ctbp2 (MGP_SPRETEiJ_G0031698) #33	Tex36 (MGP_SPRETEiJ_G0031699) #34	Edrf1 (MGP_SPRETEiJ_G0031700) #35	Mmp21 (MGP_SPRETEiJ_G0031701) #36	Uros (MGP_SPRETEiJ_G0031702) #37
Ryukyu mouse	MODERN SPECIES	16	Tacc2 (MGP_CAROLIEiJ_G0030558)	Btbd16 (MGP_CAROLIEiJ_G0030559)	MGP_CAROLIEiJ_G0030560 #7	Htra1 (MGP_CAROLIEiJ_G0030561) #9	4933402N03Rik (MGP_CAROLIEiJ_G0030562) #12	MGP_CAROLIEiJ_G0030563	Cuzd1 (MGP_CAROLIEiJ_G0030564) #13	Fam24b (MGP_CAROLIEiJ_G0030565)	Fam24a (MGP_CAROLIEiJ_G0030566)	2310057M21Rik (MGP_CAROLIEiJ_G0030567) #16	Pstk (MGP_CAROLIEiJ_G0030568) #17	Ikzf5 (MGP_CAROLIEiJ_G0030569) #18	Acadsb (MGP_CAROLIEiJ_G0030570) #19	Hmx3 (MGP_CAROLIEiJ_G0030571) #20	Hmx2 (MGP_CAROLIEiJ_G0030572) #21	Bub3 (MGP_CAROLIEiJ_G0030573) #22	Gpr26 (MGP_CAROLIEiJ_G0030574) #23	Cpxm2 (MGP_CAROLIEiJ_G0030575) #24	Chst15 (MGP_CAROLIEiJ_G0030576) #25	Oat (MGP_CAROLIEiJ_G0030577) #26	Nkx1-2 (MGP_CAROLIEiJ_G0030578) #27	Lhpp (MGP_CAROLIEiJ_G0030579) #28	Fam53b (MGP_CAROLIEiJ_G0030580) #29	Eef1akmt2 (MGP_CAROLIEiJ_G0030581) #30	Abraxas2 (MGP_CAROLIEiJ_G0030582) #31	Zranb1 (MGP_CAROLIEiJ_G0030583) #32	Ctbp2 (MGP_CAROLIEiJ_G0030584) #33	Tex36 (MGP_CAROLIEiJ_G0030585) #34	Edrf1 (MGP_CAROLIEiJ_G0030586) #35	Mmp21 (MGP_CAROLIEiJ_G0030587) #36	Uros (MGP_CAROLIEiJ_G0030588) #37
Shrew mouse	MODERN SPECIES		Tacc2 (MGP_PahariEiJ_G0013765)	Btbd16 (MGP_PahariEiJ_G0013766)	Plekha1 (MGP_PahariEiJ_G0013767) #7	Htra1 (MGP_PahariEiJ_G0013768) #9	4933402N03Rik (MGP_PahariEiJ_G0013769) #12	MGP_PahariEiJ_G0013770	Cuzd1 (MGP_PahariEiJ_G0013771) #13	Fam24b (MGP_PahariEiJ_G0013772)	Fam24a (MGP_PahariEiJ_G0013773)	2310057M21Rik (MGP_PahariEiJ_G0013774) #16	Pstk (MGP_PahariEiJ_G0013775) #17	Ikzf5 (MGP_PahariEiJ_G0013776) #18	Acadsb (MGP_PahariEiJ_G0013777) #19	Hmx3 (MGP_PahariEiJ_G0013778) #20	Hmx2 (MGP_PahariEiJ_G0013779) #21	Bub3 (MGP_PahariEiJ_G0013780) #22	Gpr26 (MGP_PahariEiJ_G0013781) #23	Cpxm2 (MGP_PahariEiJ_G0013782) #24	Chst15 (MGP_PahariEiJ_G0013783) #25	Oat (MGP_PahariEiJ_G0013784) #26	Nkx1-2 (MGP_PahariEiJ_G0013785) #27	Lhpp (MGP_PahariEiJ_G0013786) #28	Fam53b (MGP_PahariEiJ_G0013787) #29	MGP_PahariEiJ_G0013788	Abraxas2 (MGP_PahariEiJ_G0013789) #31	Zranb1 (MGP_PahariEiJ_G0013790) #32	Ctbp2 (MGP_PahariEiJ_G0013791) #33	Tex36 (MGP_PahariEiJ_G0013792) #34	Edrf1 (MGP_PahariEiJ_G0013793) #35	Mmp21 (MGP_PahariEiJ_G0013794) #36	MGP_PahariEiJ_G0013795
Rat	MODERN SPECIES		Plekha1 (ENSRNOG00000020497) #7	Htra1 (ENSRNOG00000020533) #9	Dmbt1 (ENSRNOG00000020560) #10	LOC100911413 (ENSRNOG00000034038) #10	C1h10orf120 (ENSRNOG00000022900) #12	Dmbt1l1 (ENSRNOG00000022737)	Cuzd1 (ENSRNOG00000029945) #13	RGD1559891 (ENSRNOG00000026440)	Fam24b (ENSRNOG00000026419)	C1h10orf88 (ENSRNOG00000020597) #16	Pstk (ENSRNOG00000020605) #17	Ikzf5 (ENSRNOG00000025651) #18	Acadsb (ENSRNOG00000020624) #19	Hmx3 (ENSRNOG00000020637) #20	Hmx2 (ENSRNOG00000020638) #21	Bub3 (ENSRNOG00000020643) #22	Gpr26 (ENSRNOG00000047057) #23	Cpxm2 (ENSRNOG00000015902) #24	AABR07005886.1 (ENSRNOG00000053539)	Chst15 (ENSRNOG00000016267) #25	ENSRNOG00000070567	Oat (ENSRNOG00000016807) #26	Nkx1-2 (ENSRNOG00000017006) #27	Lhpp (ENSRNOG00000017097) #28	Fam53b (ENSRNOG00000061348) #29	Eef1akmt2 (ENSRNOG00000017137) #30	Abraxas2 (ENSRNOG00000017222) #31	ENSRNOG00000064132	Zranb1 (ENSRNOG00000017294) #32	Ctbp2 (ENSRNOG00000017326) #33	ENSRNOG00000063891
Upper Galilee mountains blind mole rat	MODERN SPECIES	556	ENSNGAG00000012564	Btbd16 (ENSNGAG00000019177)	Plekha1 (ENSNGAG00000016064) #7	Htra1 (ENSNGAG00000014707) #9	4933402N03Rik (ENSNGAG00000013572) #12	ENSNGAG00000009762	Cuzd1 (ENSNGAG00000005205) #13	ENSNGAG00000001948	ENSNGAG00000000938	2310057M21Rik (ENSNGAG00000020488) #16	Pstk (ENSNGAG00000018855) #17	Ikzf5 (ENSNGAG00000014976) #18	Acadsb (ENSNGAG00000003415) #19	Hmx3 (ENSNGAG00000000752) #20	Hmx2 (ENSNGAG00000018683) #21	Bub3 (ENSNGAG00000013186) #22	Gpr26 (ENSNGAG00000012118) #23	Cpxm2 (ENSNGAG00000020180) #24	Chst15 (ENSNGAG00000017553) #25
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	70	ENSJJAG00000015501	Btbd16 (ENSJJAG00000012283)	Plekha1 (ENSJJAG00000019344) #7	Htra1 (ENSJJAG00000012131) #9	4933402N03Rik (ENSJJAG00000001575) #12	ENSJJAG00000011591	Cuzd1 (ENSJJAG00000022053) #13	ENSJJAG00000018148	Fam24a (ENSJJAG00000011583)	2310057M21Rik (ENSJJAG00000022848) #16	Pstk (ENSJJAG00000021183) #17	Ikzf5 (ENSJJAG00000000850) #18	ENSJJAG00000017926 #19	Hmx3 (ENSJJAG00000017208) #20	Hmx2 (ENSJJAG00000021150) #21	ENSJJAG00000019122 #22	Gpr26 (ENSJJAG00000024093) #23	Cpxm2 (ENSJJAG00000024326) #24	Chst15 (ENSJJAG00000020736) #25	ENSJJAG00000013687 #26	ENSJJAG00000006526	Lhpp (ENSJJAG00000019644) #28	Fam53b (ENSJJAG00000017105) #29	Eef1akmt2 (ENSJJAG00000010893) #30	Abraxas2 (ENSJJAG00000012646) #31	ENSJJAG00000018536	Zranb1 (ENSJJAG00000009904) #32	ENSJJAG00000022075 ##33	Tex36 (ENSJJAG00000020679) #34	Edrf1 (ENSJJAG00000015613) #35	Mmp21 (ENSJJAG00000017716) #36
Lesser Egyptian jerboa	MODERN SPECIES	43	Mtrf1 (ENSJJAG00000017590)	ENSJJAG00000001187	Wbp4 (ENSJJAG00000014406)	Elf1 (ENSJJAG00000018266)	Sugt1 (ENSJJAG00000017869)	Cnmd (ENSJJAG00000011534)	Pcdh8 (ENSJJAG00000017606)	Olfm4 (ENSJJAG00000018241)	ENSJJAG00000022681	ENSJJAG00000024366	ENSJJAG00000009571	ENSJJAG00000021490	Pcdh17 (ENSJJAG00000015973)	ENSJJAG00000017379	ENSJJAG00000023292	ENSJJAG00000016423 #22	Diaph3 (ENSJJAG00000000502)	Tdrd3 (ENSJJAG00000023665)	ENSJJAG00000015296	ENSJJAG00000000679	ENSJJAG00000006345	Pcdh9 (ENSJJAG00000009893)	ENSJJAG00000000702	ENSJJAG00000011337	Klhl1 (ENSJJAG00000011220)	ENSJJAG00000001120	ENSJJAG00000017740	Dach1 (ENSJJAG00000000600)	ENSJJAG00000016515	Bora (ENSJJAG00000022242)	Dis3 (ENSJJAG00000011607)
Lagomorpha	ANCESTRAL SPECIES	142					ENSGT00940000162108.tb	ENSGT00940000165716	ENSGT00940000154525.b.a #13	ENSGT00940000171163	ENSGT00940000164044	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.f #33
Rabbit	MODERN SPECIES	546						ENSOCUG00000001946	CUZD1 (ENSOCUG00000001508) #13	ENSOCUG00000024624 #16	ENSOCUG00000025051	ENSOCUG00000021184 #16	ENSOCUG00000008745 #17	ENSOCUG00000013340 #18	ACADSB (ENSOCUG00000005330) #19	HMX3 (ENSOCUG00000033472) #20	HMX2 (ENSOCUG00000014183) #21	BUB3 (ENSOCUG00000017446) #22	GPR26 (ENSOCUG00000017501) #23	CPXM2 (ENSOCUG00000010941) #24
Pika	MODERN SPECIES	3812											ENSOPRG00000014202 #17	IKZF5 (ENSOPRG00000014214) #18	ACADSB (ENSOPRG00000014224) #19	HMX3 (ENSOPRG00000014239) #20	HMX2 (ENSOPRG00000014263) #21	BUB3 (ENSOPRG00000014276) #22
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT01010000224541	ENSGT00940000162108.tb	ENSGT00940000162108.sb.a	ENSGT00940000162108.sb.b	ENSGT00940000165716	ENSGT00940000154525.b.a #13	ENSGT00940000163005 #15	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a #22
Common shrew	MODERN SPECIES	11735																BUB3 (ENSSARG00000000919) #22
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00390000005511 #12	ENSGT01010000224541	ENSGT00940000162108.tb	ENSGT00940000162108.sb.a	ENSGT00940000162108.sb.b	ENSGT00940000165716	ENSGT00940000154525.b.a #13	ENSGT00940000163005.b #15	ENSGT00940000163005.a #15	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112.c #11	ENSGT00390000012112.d #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000163005.b #15	ENSGT00940000163005.a #15	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Suina	ANCESTRAL SPECIES	6	ENSGT00950000183145.E #10	ENSGT00390000012112.c.f #11	ENSGT00390000012112.d #11	ENSGT00390000012112.c.e.a #11	ENSGT00390000012112.c.e.b #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000163005.b #15	ENSGT00940000163005.a #15	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399.e #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Chacoan peccary	MODERN SPECIES	955	PLEKHA1 (ENSCWAG00000010671) #7	HTRA1 (ENSCWAG00000010613) #9	ENSCWAG00000010416 #11	ENSCWAG00000010366 #11	ENSCWAG00000010277 #11	ENSCWAG00000009916 #11	C10orf120 (ENSCWAG00000009823) #12	ENSCWAG00000009129 #10	ENSCWAG00000009087 #15	C10orf88 (ENSCWAG00000018230) #16	PSTK (ENSCWAG00000018180) #17	IKZF5 (ENSCWAG00000018145) #18	ACADSB (ENSCWAG00000018050) #19	HMX3 (ENSCWAG00000018030) #20	HMX2 (ENSCWAG00000018003) #21	BUB3 (ENSCWAG00000017831) #22	CPXM2 (ENSCWAG00000017772) #24	CHST15 (ENSCWAG00000017720) #25	OAT (ENSCWAG00000017679) #26	NKX1-2 (ENSCWAG00000017640) #27	LHPP (ENSCWAG00000017585) #28	FAM53B (ENSCWAG00000017561) #29	ENSCWAG00000017539 #30	ENSCWAG00000017360 #31	ZRANB1 (ENSCWAG00000017307) #32	CTBP2 (ENSCWAG00000017203) #33	TEX36 (ENSCWAG00000017160) #34	EDRF1 (ENSCWAG00000017083) #35	UROS (ENSCWAG00000017033) #37	BCCIP (ENSCWAG00000017003)	DHX32 (ENSCWAG00000016967)
Pig	MODERN SPECIES	5	PSP-II (ENSSSCG00000061335) #11	PSP-I (ENSSSCG00000002978) #11	SPMI (ENSSSCG00000002977) #11	C14H10orf120 (ENSSSCG00000010717) #12	ENSSSCG00000010718	ENSSSCG00000049267	ENSSSCG00000051569 #15	ENSSSCG00000010719 #16	ENSSSCG00000058782 #15	ENSSSCG00000023865 #16	PSTK (ENSSSCG00000010721) #17	IKZF5 (ENSSSCG00000023565) #18	ACADSB (ENSSSCG00000010723) #19	HMX3 (ENSSSCG00000010724) #20	HMX2 (ENSSSCG00000010725) #21	BUB3 (ENSSSCG00000010726) #22	GPR26 (ENSSSCG00000010727) #23	CPXM2 (ENSSSCG00000010728) #24	ENSSSCG00000042079	CHST15 (ENSSSCG00000029482) #25	ENSSSCG00000010734 #26	NKX1-2 (ENSSSCG00000010733) #27	LHPP (ENSSSCG00000010735) #28	FAM53B (ENSSSCG00000010732) #29	EEF1AKMT2 (ENSSSCG00000056519) #30	ABRAXAS2 (ENSSSCG00000010737) #31	ZRANB1 (ENSSSCG00000010738) #32	CTBP2 (ENSSSCG00000010739) #33	ENSSSCG00000045428	TEX36 (ENSSSCG00000032832) #34	EDRF1 (ENSSSCG00000010741) #35
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112.c #11	ENSGT00390000012112.d #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000163005.b #15	ENSGT00940000163005.a #15	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Camelidae	ANCESTRAL SPECIES	86											ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Arabian camel	MODERN SPECIES	2	ENSCDRG00005008442 #11	ENSCDRG00005008386 #11	ENSCDRG00005008358 #11	C10orf120 (ENSCDRG00005008312) #12	ENSCDRG00005007985 #11	ENSCDRG00005007808	ENSCDRG00005007759 #15	ENSCDRG00005007717 #15	ENSCDRG00005007572 #16	ENSCDRG00005007518 #16	PSTK (ENSCDRG00005007484) #17	IKZF5 (ENSCDRG00005007437) #18	ACADSB (ENSCDRG00005007354) #19	HMX3 (ENSCDRG00005007324) #20	HMX2 (ENSCDRG00005007291) #21	BUB3 (ENSCDRG00005007065) #22	GPR26 (ENSCDRG00005006985) #23	CPXM2 (ENSCDRG00005006920) #24	CHST15 (ENSCDRG00005006860) #25	OAT (ENSCDRG00005006770) #26	NKX1-2 (ENSCDRG00005006736) #27	LHPP (ENSCDRG00005006641) #28	FAM53B (ENSCDRG00005006593) #29	EEF1AKMT2 (ENSCDRG00005007107) #30	ABRAXAS2 (ENSCDRG00005007040) #31	ZRANB1 (ENSCDRG00005006967) #32	CTBP2 (ENSCDRG00005006779) #33	TEX36 (ENSCDRG00005006718) #34	EDRF1 (ENSCDRG00005006537) #35	UROS (ENSCDRG00005006451) #37	BCCIP (ENSCDRG00005006346)
Alpaca	MODERN SPECIES	2274													PSTK (ENSVPAG00000004085) #17	IKZF5 (ENSVPAG00000004086) #18	ACADSB (ENSVPAG00000004088) #19	BUB3 (ENSVPAG00000004089) #22
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112.c #11	ENSGT00390000012112.d #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000163005.b #15	ENSGT00940000163005.a #15	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Cetacea	ANCESTRAL SPECIES	15	ENSGT00390000004068	ENSGT00940000155447	ENSGT00500000044926	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00940000154277.a.b.b.m.a.b	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00390000004068	ENSGT00940000155447	ENSGT00500000044926	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00390000005104.j.b	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00390000006865.j.b	ENSGT00940000154277.a.b.b.m.a.b	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000163005.b #15	ENSGT00390000017384.fb.b #16	ENSGT00940000163005.a #15	ENSGT00390000017384.fb.a #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00390000005104.j.b	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00390000006865.j.b	ENSGT00940000154277.a.b.b.m.a.b	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000163005.b #15	ENSGT00390000017384.fb.b #16	ENSGT00940000163005.a #15	ENSGT00390000017384.fb.a #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00390000005104.j.b	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00390000006865.j.b	ENSGT00940000154277.a.b.b.m.a.b	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.g.b #33	ENSGT00940000154430.h #33
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00500000044926	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00390000017384.gb #16	ENSGT00390000017384.fb.a #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00390000005104.j.b	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00390000006865.j.b	ENSGT00940000154277.a.b.b.m.a.b	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.g.b #33	ENSGT00940000154430.h #33
Beluga whale	MODERN SPECIES	65	ATE1 (ENSDLEG00000007967)	NSMCE4A (ENSDLEG00000007929)	ENSDLEG00000019858	ENSDLEG00000019841	BTBD16 (ENSDLEG00000019832)	PLEKHA1 (ENSDLEG00000019819) #7	HTRA1 (ENSDLEG00000019813) #9	CUNH10orf120 (ENSDLEG00000019804) #12	ENSDLEG00000019800 #16	ENSDLEG00000019795 #16	PSTK (ENSDLEG00000019793) #17	IKZF5 (ENSDLEG00000019789) #18	ACADSB (ENSDLEG00000019783) #19	HMX3 (ENSDLEG00000019778) #20	HMX2 (ENSDLEG00000019773) #21	BUB3 (ENSDLEG00000019765) #22	ENSDLEG00000019762	GPR26 (ENSDLEG00000019758) #23	CPXM2 (ENSDLEG00000019749) #24	CHST15 (ENSDLEG00000019744) #25	ENSDLEG00000019741	ENSDLEG00000019738	OAT (ENSDLEG00000019701) #26	NKX1-2 (ENSDLEG00000019691) #27	LHPP (ENSDLEG00000019685) #28	FAM53B (ENSDLEG00000019682) #29	ENSDLEG00000019676 #30	ABRAXAS2 (ENSDLEG00000019673) #31	ENSDLEG00000019671	ZRANB1 (ENSDLEG00000019649) #32	CTBP2 (ENSDLEG00000019641) #33
Narwhal	MODERN SPECIES	311	ATE1 (ENSMMNG00015020901)	NSMCE4A (ENSMMNG00015020951)	ENSMMNG00015021035	BTBD16 (ENSMMNG00015021175)	PLEKHA1 (ENSMMNG00015021236) #7	HTRA1 (ENSMMNG00015021277) #9	ENSMMNG00015021290 #10	C10orf120 (ENSMMNG00015021309) #12	ENSMMNG00015021326 #15	ENSMMNG00015021338 #15	PSTK (ENSMMNG00015021353) #17	IKZF5 (ENSMMNG00015021364) #18	ACADSB (ENSMMNG00015021378) #19	HMX3 (ENSMMNG00015021392) #20	HMX2 (ENSMMNG00015021402) #21	BUB3 (ENSMMNG00015021424) #22	ENSMMNG00015021458	GPR26 (ENSMMNG00015021467) #23	CPXM2 (ENSMMNG00015021491) #24	CHST15 (ENSMMNG00015021516) #25	ENSMMNG00015021529	ENSMMNG00015021538	OAT (ENSMMNG00015021545) #26	NKX1-2 (ENSMMNG00015021558) #27	LHPP (ENSMMNG00015021572) #28	FAM53B (ENSMMNG00015021592) #29	EEF1AKMT2 (ENSMMNG00015021603) #30	ABRAXAS2 (ENSMMNG00015021615) #31	ZRANB1 (ENSMMNG00015021633) #32	ENSMMNG00015021648	CTBP2 (ENSMMNG00015021659) #33
Vaquita	MODERN SPECIES	7	ENSPSNG00000022440	BTBD16 (ENSPSNG00000022446)	PLEKHA1 (ENSPSNG00000022463) #7	HTRA1 (ENSPSNG00000022472) #9	ENSPSNG00000022481 #10	ENSPSNG00000022486 #10	C10orf120 (ENSPSNG00000022490) #12	ENSPSNG00000022493 #15	ENSPSNG00000022495 #16	ENSPSNG00000022497 #15	ENSPSNG00000022499 #16	PSTK (ENSPSNG00000022505) #17	IKZF5 (ENSPSNG00000022509) #18	ACADSB (ENSPSNG00000022512) #19	HMX3 (ENSPSNG00000022517) #20	BUB3 (ENSPSNG00000022526) #22	ENSPSNG00000004804	GPR26 (ENSPSNG00000004875) #23	CPXM2 (ENSPSNG00000004901) #24	CHST15 (ENSPSNG00000004925) #25	ENSPSNG00000004944	OAT (ENSPSNG00000004965) #26	NKX1-2 (ENSPSNG00000004996) #27	LHPP (ENSPSNG00000005018) #28	FAM53B (ENSPSNG00000005072) #29	EEF1AKMT2 (ENSPSNG00000005092) #30	ABRAXAS2 (ENSPSNG00000005107) #31	ZRANB1 (ENSPSNG00000005126) #32	ENSPSNG00000005152	CTBP2 (ENSPSNG00000005179) #33	TEX36 (ENSPSNG00000005233) #34
Dolphin	MODERN SPECIES	2520													ACADSB (ENSTTRG00000016190) #19	HMX3 (ENSTTRG00000016192) #20	HMX2 (ENSTTRG00000016193) #21	BUB3 (ENSTTRG00000016194) #22
Sperm whale	MODERN SPECIES	12	WDR11 (ENSPCTG00005022064)	FGFR2 (ENSPCTG00005022152)	ATE1 (ENSPCTG00005022336)	ENSPCTG00005022356	PLEKHA1 (ENSPCTG00005022364) #7	ENSPCTG00005022367 #9	ENSPCTG00005022368 #10	C10orf120 (ENSPCTG00005022369) #12	ENSPCTG00005022370 #16	ENSPCTG00005004457 #16	PSTK (ENSPCTG00005004477) #17	IKZF5 (ENSPCTG00005004486) #18	ACADSB (ENSPCTG00005004501) #19	HMX3 (ENSPCTG00005004538) #20	HMX2 (ENSPCTG00005004556) #21	BUB3 (ENSPCTG00005004599) #22	ENSPCTG00005004662	GPR26 (ENSPCTG00005004687) #23	CPXM2 (ENSPCTG00005004720) #24	CHST15 (ENSPCTG00005004768) #25	ENSPCTG00005004794	FAM53B (ENSPCTG00005004807) #29	EEF1AKMT2 (ENSPCTG00005004829) #30	ABRAXAS2 (ENSPCTG00005004863) #31	ZRANB1 (ENSPCTG00005004892) #32	CTBP2 (ENSPCTG00005004973) #33	TEX36 (ENSPCTG00005005162) #34	EDRF1 (ENSPCTG00005005201) #35	UROS (ENSPCTG00005005361) #37	BCCIP (ENSPCTG00005005607)	DHX32 (ENSPCTG00005005668)
Blue whale	MODERN SPECIES	7	BTBD16 (ENSBMSG00010015231)	PLEKHA1 (ENSBMSG00010015154) #7	HTRA1 (ENSBMSG00010015062) #9	C10orf120 (ENSBMSG00010015033) #12	ENSBMSG00010014864 #10	ENSBMSG00010014827	ENSBMSG00010014809 #15	ENSBMSG00010014794 #16	ENSBMSG00010014768 #15	ENSBMSG00010014749 #16	PSTK (ENSBMSG00010014723) #17	IKZF5 (ENSBMSG00010014703) #18	ENSBMSG00010014664 #19	HMX3 (ENSBMSG00010014645) #20	HMX2 (ENSBMSG00010014617) #21	BUB3 (ENSBMSG00010014520) #22	ENSBMSG00010014482	GPR26 (ENSBMSG00010014443) #23	CPXM2 (ENSBMSG00010014404) #24	CHST15 (ENSBMSG00010014379) #25	ENSBMSG00010014351	ENSBMSG00010014326	OAT (ENSBMSG00010014300) #26	NKX1-2 (ENSBMSG00010014273) #27	ENSBMSG00010014254	LHPP (ENSBMSG00010014228) #28	FAM53B (ENSBMSG00010014196) #29	EEF1AKMT2 (ENSBMSG00010014167) #30	ABRAXAS2 (ENSBMSG00010014139) #31	ZRANB1 (ENSBMSG00010014072) #32	CTBP2 (ENSBMSG00010013957) #33
Pecora	ANCESTRAL SPECIES	12	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112.c #11	ENSGT00390000012112.d #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000163005.b #15	ENSGT00940000163005.a #15	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Yarkand deer	MODERN SPECIES	6	BTBD16 (ENSCHYG00000011865)	PLEKHA1 (ENSCHYG00000012229) #7	HTRA1 (ENSCHYG00000012466) #9	ENSCHYG00000012574 #10	ENSCHYG00000012694	C10orf120 (ENSCHYG00000012768) #12	ENSCHYG00000012814 ##10	ENSCHYG00000012970 #15	ENSCHYG00000013013 #16	ENSCHYG00000013157 #16	ENSCHYG00000013211 #15	IKZF5 (ENSCHYG00000013253) #18	ACADSB (ENSCHYG00000013318) #19	HMX3 (ENSCHYG00000013451) #20	HMX2 (ENSCHYG00000013483) #21	BUB3 (ENSCHYG00000013530) #22	GPR26 (ENSCHYG00000013748) #23	CPXM2 (ENSCHYG00000013812) #24	CHST15 (ENSCHYG00000014028) #25	OAT (ENSCHYG00000014322) #26	ENSCHYG00000014425 #27	LHPP (ENSCHYG00000014469) #28	FAM53B (ENSCHYG00000014703) #29	EEF1AKMT2 (ENSCHYG00000014822) #30	ENSCHYG00000014873	ABRAXAS2 (ENSCHYG00000014923) #31	ZRANB1 (ENSCHYG00000015039) #32	ENSCHYG00000015319 #33	TEX36 (ENSCHYG00000015522) #34	EDRF1 (ENSCHYG00000015642) #35	UROS (ENSCHYG00000016089) #37
Percora_a	ANCESTRAL SPECIES	14	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112.c #11	ENSGT00390000012112.d.b #11	ENSGT00390000012112.d.a #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000162108.sb.a	ENSGT00940000162108.sb.b	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Siberian musk deer	MODERN SPECIES	1161	HTRA1 (ENSMMSG00000013570) #9	ENSMMSG00000013536 #11	ENSMMSG00000013503 #11	ENSMMSG00000013463 #11	C10orf120 (ENSMMSG00000013433) #12	ENSMMSG00000013363	ENSMMSG00000013335	ENSMMSG00000013323 #16	ENSMMSG00000013300 #15	ENSMMSG00000013281 #16	PSTK (ENSMMSG00000013263) #17	IKZF5 (ENSMMSG00000013250) #18	ACADSB (ENSMMSG00000013226) #19	HMX3 (ENSMMSG00000013208) #20	HMX2 (ENSMMSG00000013191) #21	BUB3 (ENSMMSG00000013050) #22	GPR26 (ENSMMSG00000012996) #23	CPXM2 (ENSMMSG00000012925) #24	CHST15 (ENSMMSG00000012879) #25	OAT (ENSMMSG00000012853) #26	NKX1-2 (ENSMMSG00000012827) #27	LHPP (ENSMMSG00000012785) #28	FAM53B (ENSMMSG00000012745) #29	ENSMMSG00000012701 #30	ABRAXAS2 (ENSMMSG00000012681) #31	ENSMMSG00000012649	ZRANB1 (ENSMMSG00000012620) #32	CTBP2 (ENSMMSG00000012540) #33	TEX36 (ENSMMSG00000012502) #34	EDRF1 (ENSMMSG00000012377) #35	UROS (ENSMMSG00000012288) #37
Bovidae	ANCESTRAL SPECIES	24	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112.c #11	ENSGT00390000012112.d.b #11	ENSGT00390000012112.d.a #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000162108.sb.a	ENSGT00940000162108.sb.b	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Caprinae	ANCESTRAL SPECIES	19	ENSGT00950000183145.E #10	ENSGT00390000012112.c #11	ENSGT00390000012112.d.b #11	ENSGT00390000012112.d.a #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000162108.sb.a	ENSGT00390000017384.x #16	ENSGT00940000163005.a #15	ENSGT00390000017384.w #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399.i #30	ENSGT00530000063424.a.j #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Goat	MODERN SPECIES	18	PLEKHA1 (ENSCHIG00000005289) #7	HTRA1 (ENSCHIG00000015305) #9	ENSCHIG00000011076 #10	ENSCHIG00000020915 #11	ENSCHIG00000014539 #11	ENSCHIG00000000456 #11	C10orf120 (ENSCHIG00000016466) #12	ENSCHIG00000010921	ENSCHIG00000023064 #16	ENSCHIG00000021927 #16	PSTK (ENSCHIG00000018657) #17	IKZF5 (ENSCHIG00000025772) #18	ACADSB (ENSCHIG00000024606) #19	HMX3 (ENSCHIG00000010956) #20	HMX2 (ENSCHIG00000026470) #21	BUB3 (ENSCHIG00000021092) #22	GPR26 (ENSCHIG00000011580) #23	CPXM2 (ENSCHIG00000019349) #24	CHST15 (ENSCHIG00000024216) #25	ENSCHIG00000014280 #26	NKX1-2 (ENSCHIG00000009179) #27	LHPP (ENSCHIG00000016913) #28	ENSCHIG00000012818 #29	ENSCHIG00000004811 #30	ENSCHIG00000021679 #31	ZRANB1 (ENSCHIG00000023041) #32	ENSCHIG00000020240 #33	TEX36 (ENSCHIG00000011668) #34	EDRF1 (ENSCHIG00000011117) #35	UROS (ENSCHIG00000022204) #37	ENSCHIG00000016594
Rambouillet Sheep	MODERN SPECIES	14	ENSOARG00020022322 #11	ENSOARG00020022345 #11	C10orf120 (ENSOARG00020022395) #12	ENSOARG00020022445	ENSOARG00020022472	ENSOARG00020022490 #15	ENSOARG00020022507	ENSOARG00020022531 #16	ENSOARG00020022621 #15	ENSOARG00020022651 #16	PSTK (ENSOARG00020022690) #17	IKZF5 (ENSOARG00020022735) #18	ACADSB (ENSOARG00020022775) #19	HMX3 (ENSOARG00020022802) #20	HMX2 (ENSOARG00020022828) #21	BUB3 (ENSOARG00020022850) #22	ENSOARG00020022917	GPR26 (ENSOARG00020022931) #23	CPXM2 (ENSOARG00020022962) #24	CHST15 (ENSOARG00020023005) #25	OAT (ENSOARG00020023046) #26	NKX1-2 (ENSOARG00020023086) #27	LHPP (ENSOARG00020023115) #28	FAM53B (ENSOARG00020023134) #29	EEF1AKMT2 (ENSOARG00020023184) #30	ENSOARG00020023207 #31	ZRANB1 (ENSOARG00020023239) #32	CTBP2 (ENSOARG00020023317) #33	TEX36 (ENSOARG00020023414) #34	EDRF1 (ENSOARG00020023473) #35	UROS (ENSOARG00020023759) #37
Bovinae	ANCESTRAL SPECIES	22	ENSGT00390000012112.d.b #11	ENSGT00390000012112.d.a #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000162108.sb.a	ENSGT00940000162108.sb.b	ENSGT00940000163005.b #15	ENSGT00390000017384.v #16	ENSGT00940000163005.a #15	ENSGT00390000017384.u #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
American bison	MODERN SPECIES	3316	PLEKHA1 (ENSBBBG00000010672) #7	ENSBBBG00000009041 #9	ENSBBBG00000010694 #11	ENSBBBG00000010708 #11	ENSBBBG00000008726 #11	C10orf120 (ENSBBBG00000001875) #12	ENSBBBG00000010993	ENSBBBG00000011033 #15	ENSBBBG00000011038 #15	C10orf88 (ENSBBBG00000011048) #16	PSTK (ENSBBBG00000001987) #17	IKZF5 (ENSBBBG00000011060) #18	ACADSB (ENSBBBG00000011078) #19	HMX3 (ENSBBBG00000011087) #20	HMX2 (ENSBBBG00000001996) #21	BUB3 (ENSBBBG00000002000) #22	CPXM2 (ENSBBBG00000011180) #24	CHST15 (ENSBBBG00000011197) #25	OAT (ENSBBBG00000011212) #26	LHPP (ENSBBBG00000002042) #28	FAM53B (ENSBBBG00000011239) #29	EEF1AKMT2 (ENSBBBG00000011272) #30	ABRAXAS2 (ENSBBBG00000002054) #31	ZRANB1 (ENSBBBG00000011300) #32	ENSBBBG00000011321 #33	TEX36 (ENSBBBG00000006933) #34	EDRF1 (ENSBBBG00000011381) #35	UROS (ENSBBBG00000007119) #37	BCCIP (ENSBBBG00000011417)	DHX32 (ENSBBBG00000011428)	ENSBBBG00000011431
Bos	ANCESTRAL SPECIES	23	ENSGT00390000012112.d.a #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000162108.sb.a	ENSGT00940000162108.sb.b	ENSGT00940000163005.b #15	ENSGT00390000017384.v #16	ENSGT00940000163005.a #15	ENSGT00390000017384.u #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000153295.a.e.a.b	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Bos_b	ANCESTRAL SPECIES	23	ENSGT00390000012112.d.a #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000162108.sb.a	ENSGT00940000162108.sb.b	ENSGT00940000163005.b #15	ENSGT00390000017384.v #16	ENSGT00940000163005.a #15	ENSGT00390000017384.u #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000153295.a.e.a.b	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Cow	MODERN SPECIES	18	ENSBTAG00000038684 #11	SPADH2 (ENSBTAG00000008029) #11	SPADH1 (ENSBTAG00000010796) #11	C26H10orf120 (ENSBTAG00000010797) #12	ENSBTAG00000039755	ENSBTAG00000055162	ENSBTAG00000051599	ENSBTAG00000023846 #16	ENSBTAG00000023845 #16	PSTK (ENSBTAG00000014028) #17	IKZF5 (ENSBTAG00000023847) #18	ACADSB (ENSBTAG00000018041) #19	ENSBTAG00000048256	HMX3 (ENSBTAG00000001006) #20	HMX2 (ENSBTAG00000017911) #21	BUB3 (ENSBTAG00000017913) #22	GPR26 (ENSBTAG00000051105) #23	CPXM2 (ENSBTAG00000018941) #24	CHST15 (ENSBTAG00000003312) #25	OAT (ENSBTAG00000006928) #26	NKX1-2 (ENSBTAG00000020918) #27	LHPP (ENSBTAG00000010957) #28	FAM53B (ENSBTAG00000012970) #29	EEF1AKMT2 (ENSBTAG00000050151) #30	ABRAXAS2 (ENSBTAG00000023840) #31	ZRANB1 (ENSBTAG00000003395) #32	CTBP2 (ENSBTAG00000003397) #33	TEX36 (ENSBTAG00000007011) #34	EDRF1 (ENSBTAG00000009439) #35	UROS (ENSBTAG00000005791) #37	BCCIP (ENSBTAG00000005792)
Hybrid Bos Indicus	MODERN SPECIES	18	ENSBIXG00005021776 #10	ENSBIXG00005021850 #11	ENSBIXG00005021867 #11	ENSBIXG00005021940 #11	C10orf120 (ENSBIXG00005021964) #12	ENSBIXG00005007366	ENSBIXG00005003736 #15	ENSBIXG00005022065 #16	ENSBIXG00005022073 #15	ENSBIXG00005022094 #16	PSTK (ENSBIXG00005007367) #17	IKZF5 (ENSBIXG00005022167) #18	ACADSB (ENSBIXG00005003788) #19	HMX3 (ENSBIXG00005022277) #20	HMX2 (ENSBIXG00005003794) #21	BUB3 (ENSBIXG00005022455) #22	GPR26 (ENSBIXG00005022493) #23	CPXM2 (ENSBIXG00005007228) #24	CHST15 (ENSBIXG00005022629) #25	OAT (ENSBIXG00005022673) #26	NKX1-2 (ENSBIXG00005022692) #27	LHPP (ENSBIXG00005022732) #28	FAM53B (ENSBIXG00005022783) #29	EEF1AKMT2 (ENSBIXG00005022799) #30	ABRAXAS2 (ENSBIXG00005022811) #31	ENSBIXG00005022855 #32	CTBP2 (ENSBIXG00005022970) #33	TEX36 (ENSBIXG00005023048) #34	EDRF1 (ENSBIXG00005023100) #35	UROS (ENSBIXG00005003948) #37	BCCIP (ENSBIXG00005023242)
Bos_a	ANCESTRAL SPECIES	17	ENSGT00390000012112.c #11	ENSGT00390000012112.d.b #11	ENSGT00390000012112.d.a #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000163005.b #15	ENSGT00390000017384.v #16	ENSGT00940000163005.a #15	ENSGT00390000017384.u #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000153295.a.e.a.b	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Domestic yak	MODERN SPECIES	17	ENSBGRG00000025138 #11	ENSBGRG00000025155 #11	ENSBGRG00000025185 #11	C10orf120 (ENSBGRG00000025213) #12	ENSBGRG00000025242	ENSBGRG00000025332 #15	ENSBGRG00000025341 #16	ENSBGRG00000025366 #15	ENSBGRG00000025376 #16	PSTK (ENSBGRG00000025390) #17	IKZF5 (ENSBGRG00000025418) #18	ACADSB (ENSBGRG00000025451) #19	ENSBGRG00000025478	HMX3 (ENSBGRG00000025490) #20	HMX2 (ENSBGRG00000025503) #21	BUB3 (ENSBGRG00000025518) #22	GPR26 (ENSBGRG00000025595) #23	CPXM2 (ENSBGRG00000025616) #24	CHST15 (ENSBGRG00000025644) #25	OAT (ENSBGRG00000025665) #26	ENSBGRG00000025674	NKX1-2 (ENSBGRG00000006952) #27	LHPP (ENSBGRG00000007063) #28	FAM53B (ENSBGRG00000007368) #29	EEF1AKMT2 (ENSBGRG00000007473) #30	ABRAXAS2 (ENSBGRG00000007533) #31	ZRANB1 (ENSBGRG00000007598) #32	CTBP2 (ENSBGRG00000007663) #33	TEX36 (ENSBGRG00000008012) #34	EDRF1 (ENSBGRG00000008073) #35	UROS (ENSBGRG00000008669) #37
Wild yak	MODERN SPECIES	698																BUB3 (ENSBMUG00000004543) #22	GPR26 (ENSBMUG00000004510) #23	CPXM2 (ENSBMUG00000004488) #24
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT00940000156955 #9	ENSGT00390000005511 #12	ENSGT00950000183145.E #10	ENSGT00940000163882	ENSGT00940000162108.tb	ENSGT00940000165716	ENSGT00940000154525.b.a #13	ENSGT00940000163005.b #15	ENSGT00390000017384 #16	ENSGT00940000163005.a #15	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Carnivora	ANCESTRAL SPECIES	16	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT01010000224541	ENSGT00940000162108.tb	ENSGT00940000162108.sb.b	ENSGT00940000154525.b.a #13	ENSGT00940000163005.b #15	ENSGT00390000017384.hb #16	ENSGT00940000163005.a #15	ENSGT00390000017384.ib #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Caniformia	ANCESTRAL SPECIES	13	ENSGT00950000183145.D ##10	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT01010000224541	ENSGT00940000162108.tb	ENSGT00940000162108.sb.b	ENSGT00940000154525.b.a #13	ENSGT00940000163005.b #15	ENSGT00390000017384.hb #16	ENSGT00940000163005.a #15	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT01010000224541	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00390000017384.hb #16	ENSGT00940000163005.a #15	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Ursidae	ANCESTRAL SPECIES	5	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955.d #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT01010000224541	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00390000017384.hb #16	ENSGT00940000163005.a #15	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Ursus	ANCESTRAL SPECIES	7	ENSGT00940000155157 #7	ENSGT00940000156955.d #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT01010000224541	ENSGT00940000162108.tb	ENSGT00940000162108.sb.a	ENSGT00940000154525.b.a #13	ENSGT00390000017384.hb.b #16	ENSGT00390000017384.hb.a #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399.d #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
American black bear	MODERN SPECIES	1379													ACADSB (ENSUAMG00000007695) #19	HMX3 (ENSUAMG00000007698) #20	HMX2 (ENSUAMG00000007700) #21	BUB3 (ENSUAMG00000007703) #22
Polar bear	MODERN SPECIES	92	TACC2 (ENSUMAG00000004546)	BTBD16 (ENSUMAG00000004944)	PLEKHA1 (ENSUMAG00000004973) #7	HTRA1 (ENSUMAG00000004978) #9	ENSUMAG00000004981 #10	ENSUMAG00000004990 #10	C10orf120 (ENSUMAG00000005005) #12	ENSUMAG00000005031	ENSUMAG00000005147	CUZD1 (ENSUMAG00000005153) #13	ENSUMAG00000005171 #16	ENSUMAG00000005180 #16	PSTK (ENSUMAG00000005193) #17	IKZF5 (ENSUMAG00000005198) #18	ACADSB (ENSUMAG00000005207) #19	BUB3 (ENSUMAG00000005215) #22	CPXM2 (ENSUMAG00000005241) #24	CHST15 (ENSUMAG00000005326) #25	OAT (ENSUMAG00000005337) #26	LHPP (ENSUMAG00000005342) #28	FAM53B (ENSUMAG00000005371) #29	ENSUMAG00000005375 #30	ABRAXAS2 (ENSUMAG00000005388) #31	ZRANB1 (ENSUMAG00000005395) #32	ENSUMAG00000005406 #33	TEX36 (ENSUMAG00000005429) #34	EDRF1 (ENSUMAG00000005462) #35	UROS (ENSUMAG00000005692) #37	BCCIP (ENSUMAG00000005698)	DHX32 (ENSUMAG00000005702)	FANK1 (ENSUMAG00000005705)
Giant Panda	MODERN SPECIES	16	ENSAMEG00000010913	NSMCE4A (ENSAMEG00000010897)	TACC2 (ENSAMEG00000010858)	BTBD16 (ENSAMEG00000010849)	PLEKHA1 (ENSAMEG00000024104) #7	HTRA1 (ENSAMEG00000024939) #9	ENSAMEG00000008992 #10	ENSAMEG00000004692 #12	ENSAMEG00000004685 #16	ENSAMEG00000030562 #15	ENSAMEG00000004671 #17	ENSAMEG00000004665 #18	ACADSB (ENSAMEG00000004639) #19	HMX3 (ENSAMEG00000024653) #20	HMX2 (ENSAMEG00000009520) #21	BUB3 (ENSAMEG00000009521) #22	GPR26 (ENSAMEG00000009542) #23	CPXM2 (ENSAMEG00000009550) #24	CHST15 (ENSAMEG00000010183) #25	OAT (ENSAMEG00000010160) #26	LHPP (ENSAMEG00000010149) #28	FAM53B (ENSAMEG00000004200) #29	EEF1AKMT2 (ENSAMEG00000004197) #30	ABRAXAS2 (ENSAMEG00000004177) #31	ZRANB1 (ENSAMEG00000004155) #32	ENSAMEG00000004118 #33	ENSAMEG00000007609	ENSAMEG00000007551	CCN4 (ENSAMEG00000029921)	ENSAMEG00000007531 #34	ENSAMEG00000007492 #35
Mustelinae	ANCESTRAL SPECIES	40	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00940000163882	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00390000017384.hb #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Ferret	MODERN SPECIES	193	HTRA1 (ENSMPUG00000002895) #9	ENSMPUG00000002892 #10	ENSMPUG00000002887	C10orf120 (ENSMPUG00000002881) #12	ENSMPUG00000002877	ENSMPUG00000002820	CUZD1 (ENSMPUG00000002814) #13	ENSMPUG00000019258	ENSMPUG00000002809 #16	ENSMPUG00000002801 #16	PSTK (ENSMPUG00000002790) #17	IKZF5 (ENSMPUG00000002786) #18	ACADSB (ENSMPUG00000002783) #19	HMX3 (ENSMPUG00000002780) #20	HMX2 (ENSMPUG00000002778) #21	BUB3 (ENSMPUG00000002774) #22	ENSMPUG00000002770	GPR26 (ENSMPUG00000002767) #23	CPXM2 (ENSMPUG00000002760) #24	CHST15 (ENSMPUG00000002754) #25	OAT (ENSMPUG00000002748) #26	NKX1-2 (ENSMPUG00000002742) #27	LHPP (ENSMPUG00000002737) #28	FAM53B (ENSMPUG00000002735) #29	EEF1AKMT2 (ENSMPUG00000002730) #30	ABRAXAS2 (ENSMPUG00000002713) #31	ZRANB1 (ENSMPUG00000002701) #32	ENSMPUG00000002691 #33	ENSMPUG00000002687	ENSMPUG00000002664	ENSMPUG00000002661
American mink	MODERN SPECIES	35	ATE1 (ENSNVIG00000006880)	NSMCE4A (ENSNVIG00000006954)	TACC2 (ENSNVIG00000006963)	BTBD16 (ENSNVIG00000007104)	PLEKHA1 (ENSNVIG00000007135) #7	HTRA1 (ENSNVIG00000007206) #9	ENSNVIG00000007221 #10	C10orf120 (ENSNVIG00000007718) #12	CUZD1 (ENSNVIG00000007746) #13	ENSNVIG00000007783 #16	PSTK (ENSNVIG00000007798) #17	IKZF5 (ENSNVIG00000007802) #18	ACADSB (ENSNVIG00000007815) #19	HMX3 (ENSNVIG00000007846) #20	HMX2 (ENSNVIG00000007861) #21	BUB3 (ENSNVIG00000007873) #22	GPR26 (ENSNVIG00000007954) #23	CPXM2 (ENSNVIG00000007971) #24	CHSTF (ENSNVIG00000008037) #25	OAT (ENSNVIG00000008116) #26	NKX1-2 (ENSNVIG00000008189) #27	LHPP (ENSNVIG00000008217) #28	ENSNVIG00000008251	FAM53B (ENSNVIG00000008261) #29	EEF1AKMT2 (ENSNVIG00000008297) #30	ABRAXAS2 (ENSNVIG00000008316) #31	ZRANB1 (ENSNVIG00000008361) #32	CTBP2 (ENSNVIG00000008393) #33	TEX36 (ENSNVIG00000008467) #34	EDRF1 (ENSNVIG00000008487) #35	MMP21 (ENSNVIG00000008553) #36
Canidae	ANCESTRAL SPECIES	16	ENSGT00940000156955 #9	ENSGT00950000183145.D ##10	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000162108.sb.b	ENSGT00940000154525.b.a #13	ENSGT00940000163005.b #15	ENSGT00390000017384.hb.f #16	ENSGT00390000017384.hb.e #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Canis_lupus	ANCESTRAL SPECIES	20	ENSGT00950000183145.E.kb.a #10	ENSGT00950000183145.B.a.b ##10	ENSGT00950000183145.E.lb #10	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000162108.sb.b	ENSGT00940000154525.b.a #13	ENSGT00940000163005.b #15	ENSGT00390000017384.hb.f #16	ENSGT00390000017384.hb.e #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00390000015889.o.a.b	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36
Dingo	MODERN SPECIES	165	ENSCAFG00020015160 #10	ENSCAFG00020015167 #10	ENSCAFG00020015171 #10	C10orf120 (ENSCAFG00020015180) #12	ENSCAFG00020015184	ENSCAFG00020015187	ENSCAFG00020015189	CUZD1 (ENSCAFG00020015193) #13	ENSCAFG00020015197 #16	ENSCAFG00020015204 #16	PSTK (ENSCAFG00020015208) #17	IKZF5 (ENSCAFG00020015212) #18	ACADSB (ENSCAFG00020015216) #19	HMX3 (ENSCAFG00020015221) #20	HMX2 (ENSCAFG00020015225) #21	BUB3 (ENSCAFG00020015234) #22	GPR26 (ENSCAFG00020015240) #23	CPXM2 (ENSCAFG00020015264) #24	CHST15 (ENSCAFG00020015364) #25	OAT (ENSCAFG00020015369) #26	ENSCAFG00020015371	NKX1-2 (ENSCAFG00020015374) #27	LHPP (ENSCAFG00020015380) #28	ENSCAFG00020015383	FAM53B (ENSCAFG00020015385) #29	EEF1AKMT2 (ENSCAFG00020015392) #30	ABRAXAS2 (ENSCAFG00020015395) #31	ZRANB1 (ENSCAFG00020015397) #32	ENSCAFG00020015405 #33	TEX36 (ENSCAFG00020015411) #34	EDRF1 (ENSCAFG00020015424) #35
Dog	MODERN SPECIES	20	HTRA1 (ENSCAFG00845022222) #9	ENSCAFG00845022418 #10	ENSCAFG00845023612 #10	ENSCAFG00845023643 ##10	C10orf120 (ENSCAFG00845023695) #12	ENSCAFG00845023783	CUZD1 (ENSCAFG00845024055) #13	ENSCAFG00845024126 #15	ENSCAFG00845024159 #16	ENSCAFG00845024221 #16	PSTK (ENSCAFG00845024287) #17	IKZF5 (ENSCAFG00845024334) #18	ACADSB (ENSCAFG00845024388) #19	HMX3 (ENSCAFG00845024473) #20	HMX2 (ENSCAFG00845024515) #21	PSTK (ENSCAFG00845024586) #22	GPR26 (ENSCAFG00845024706) #23	CHST15 (ENSCAFG00845024829) #24	ENSCAFG00845025131 #26	ENSCAFG00845025203	NKX1-2 (ENSCAFG00845025233) #27	LHPP (ENSCAFG00845025309) #28	ENSCAFG00845025467	FAM53B (ENSCAFG00845025520) #29	EEF1AKMT2 (ENSCAFG00845025641) #30	ABRAXAS2 (ENSCAFG00845025738) #31	ZRANB1 (ENSCAFG00845025822) #32	CTBP2 (ENSCAFG00845025974) #33	TEX36 (ENSCAFG00845026329) #34	EDRF1 (ENSCAFG00845026396) #35	MMP21 (ENSCAFG00845026645) #36
Red fox	MODERN SPECIES	82						C10orf120 (ENSVVUG00000006906) #12	ENSVVUG00000006890	ENSVVUG00000006611	CUZD1 (ENSVVUG00000006588) #13	ENSVVUG00000006564 #16	CUNH10orf88 (ENSVVUG00000006555) #16	PSTK (ENSVVUG00000006546) #17	IKZF5 (ENSVVUG00000006538) #18	ACADSB (ENSVVUG00000006530) #19	HMX2 (ENSVVUG00000006525) #21	BUB3 (ENSVVUG00000006513) #22	GPR26 (ENSVVUG00000006494) #23	CPXM2 (ENSVVUG00000006126) #24	CHST15 (ENSVVUG00000006046) #25	ENSVVUG00000006028	OAT (ENSVVUG00000006021) #26	ENSVVUG00000006014	LHPP (ENSVVUG00000006010) #28	FAM53B (ENSVVUG00000006005) #29	EEF1AKMT2 (ENSVVUG00000005997) #30	ABRAXAS2 (ENSVVUG00000005991) #31	ZRANB1 (ENSVVUG00000005988) #32	CTBP2 (ENSVVUG00000005975) #33	TEX36 (ENSVVUG00000005956) #34	EDRF1 (ENSVVUG00000005942) #35	ENSVVUG00000005832 #36
Felidae	ANCESTRAL SPECIES	14	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000163005.b #15	ENSGT00390000017384.ib #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Panthera	ANCESTRAL SPECIES	8	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000163005.b #15	ENSGT00390000017384.ib #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000163005.b #15	ENSGT00390000017384.ib.c #16	ENSGT00390000017384.ib.d #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
leopard	MODERN SPECIES	99						C10orf120 (ENSPPRG00000014122) #12	ENSPPRG00000014213	CUZD1 (ENSPPRG00000014335) #13	ENSPPRG00000014421 #16	ENSPPRG00000014479 #16	PSTK (ENSPPRG00000014523) #17	IKZF5 (ENSPPRG00000014597) #18	ACADSB (ENSPPRG00000014638) #19	HMX3 (ENSPPRG00000014702) #20	HMX2 (ENSPPRG00000014728) #21	BUB3 (ENSPPRG00000014829) #22	GPR26 (ENSPPRG00000014881) #23	CPXM2 (ENSPPRG00000014912) #24	CHST15 (ENSPPRG00000015072) #25	OAT (ENSPPRG00000016061) #26	NKX1-2 (ENSPPRG00000016141) #27	LHPP (ENSPPRG00000016378) #28	FAM53B (ENSPPRG00000016742) #29	EEF1AKMT2 (ENSPPRG00000017084) #30	ABRAXAS2 (ENSPPRG00000017184) #31	ZRANB1 (ENSPPRG00000017274) #32	CTBP2 (ENSPPRG00000017423) #33	TEX36 (ENSPPRG00000017465) #34	EDRF1 (ENSPPRG00000018983) #35	MMP21 (ENSPPRG00000019186) #36	UROS (ENSPPRG00000019516) #37
lion	MODERN SPECIES	11	ENSPLOG00000018655	BTBD16 (ENSPLOG00000018372)	PLEKHA1 (ENSPLOG00000018098) #7	HTRA1 (ENSPLOG00000017957) #9	C10orf120 (ENSPLOG00000017895) #12	ENSPLOG00000016884	CUZD1 (ENSPLOG00000016651) #13	ENSPLOG00000016623 #15	ENSPLOG00000016571 #16	ENSPLOG00000016528 #16	PSTK (ENSPLOG00000016472) #17	IKZF5 (ENSPLOG00000016444) #18	ACADSB (ENSPLOG00000016393) #19	HMX3 (ENSPLOG00000016360) #20	HMX2 (ENSPLOG00000016327) #21	BUB3 (ENSPLOG00000016227) #22	GPR26 (ENSPLOG00000016174) #23	CPXM2 (ENSPLOG00000016053) #24	CHST15 (ENSPLOG00000016014) #25	OAT (ENSPLOG00000015937) #26	NKX1-2 (ENSPLOG00000015903) #27	LHPP (ENSPLOG00000015773) #28	FAM53B (ENSPLOG00000015728) #29	EEF1AKMT2 (ENSPLOG00000015654) #30	ABRAXAS2 (ENSPLOG00000015611) #31	ZRANB1 (ENSPLOG00000015546) #32	CTBP2 (ENSPLOG00000015403) #33	TEX36 (ENSPLOG00000015239) #34	EDRF1 (ENSPLOG00000015097) #35	MMP21 (ENSPLOG00000014993) #36	UROS (ENSPLOG00000014815) #37
Tiger	MODERN SPECIES	29												ENSPTIG00000001176 #16	ENSPTIG00000001202 #16	IKZF5 (ENSPTIG00000001713) #18	ACADSB (ENSPTIG00000001992) #19	BUB3 (ENSPTIG00000002215) #22	CPXM2 (ENSPTIG00000002466) #24
Cat	MODERN SPECIES	242	ENSFCAG00000048419	ENSFCAG00000047757	ENSFCAG00000003657 #10	ENSFCAG00000026044	C10orf120 (ENSFCAG00000035584) #12	ENSFCAG00000029545 #13	ENSFCAG00000041375 #15	ENSFCAG00000007571 #16	ENSFCAG00000030445 #16	PSTK (ENSFCAG00000027434) #17	IKZF5 (ENSFCAG00000041709) #18	ACADSB (ENSFCAG00000003421) #19	ENSFCAG00000048422	HMX3 (ENSFCAG00000041528) #20	HMX2 (ENSFCAG00000042782) #21	BUB3 (ENSFCAG00000024986) #22	ENSFCAG00000045983 #23	CPXM2 (ENSFCAG00000013258) #24	CHST15 (ENSFCAG00000010458) #25	OAT (ENSFCAG00000013847) #26	NKX1-2 (ENSFCAG00000042371) #27	LHPP (ENSFCAG00000001827) #28	FAM53B (ENSFCAG00000015458) #29	ABRAXAS2 (ENSFCAG00000022333) #31	ZRANB1 (ENSFCAG00000002438) #32	CTBP2 (ENSFCAG00000002441) #33	TEX36 (ENSFCAG00000012986) #34	EDRF1 (ENSFCAG00000009548) #35	MMP21 (ENSFCAG00000012987) #36	UROS (ENSFCAG00000009550) #37	BCCIP (ENSFCAG00000024151)
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000165716	ENSGT00940000154525.b.a #13	ENSGT00940000163005.b #15	ENSGT00390000017384 #16	ENSGT00940000163005.a #15	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Equus	ANCESTRAL SPECIES	9	ENSGT00390000005511 #12	ENSGT00950000183145.E #10	ENSGT00940000162108.tb	ENSGT00940000165716	ENSGT00940000154525.b.a #13	ENSGT00940000163005.b.a #15	ENSGT00940000163005.b.b #15	ENSGT00390000017384.kb #16	ENSGT00940000163005.a #15	ENSGT00390000017384.jb #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Horse	MODERN SPECIES		ENSECAG00000006313 #11	ENSECAG00000046082	C1H10orf120 (ENSECAG00000002143) #12	ENSECAG00000009186 #10	ENSECAG00000019510	ENSECAG00000014886 #15	CUZD1 (ENSECAG00000014944) #13	ENSECAG00000013380 #16	ENSECAG00000040992 #15	ENSECAG00000012505 #16	PSTK (ENSECAG00000011238) #17	IKZF5 (ENSECAG00000006987) #18	ENSECAG00000017638 #19	HMX3 (ENSECAG00000037274) #20	HMX2 (ENSECAG00000012690) #21	BUB3 (ENSECAG00000010047) #22	GPR26 (ENSECAG00000008245) #23	CPXM2 (ENSECAG00000024631) #24	CHST15 (ENSECAG00000022078) #25	OAT (ENSECAG00000014873) #26	NKX1-2 (ENSECAG00000039629) #27	LHPP (ENSECAG00000037483) #28	FAM53B (ENSECAG00000035894) #29	ENSECAG00000007838 #30	ABRAXAS2 (ENSECAG00000023340) #31	ZRANB1 (ENSECAG00000017587) #32	CTBP2 (ENSECAG00000022504) #33	TEX36 (ENSECAG00000020373) #34	EDRF1 (ENSECAG00000000346) #35	MMP21 (ENSECAG00000000156) #36	UROS (ENSECAG00000017285) #37
Donkey	MODERN SPECIES	11	ENSEASG00005024831 #11	C10orf120 (ENSEASG00005033462) #12	ENSEASG00005037253 #10	ENSEASG00005013472	ENSEASG00005032296	CUZD1 (ENSEASG00005013476) #13	ENSEASG00005028447 #15	ENSEASG00005032712 #16	ENSEASG00005013481 #15	ENSEASG00005013480 #16	PSTK (ENSEASG00005013485) #17	IKZF5 (ENSEASG00005024598) #18	ACADSB (ENSEASG00005013489) #19	HMX3 (ENSEASG00005013491) #20	HMX2 (ENSEASG00005033822) #21	BUB3 (ENSEASG00005013498) #22	GPR26 (ENSEASG00005013501) #23	CPXM2 (ENSEASG00005013580) #24	CHST15 (ENSEASG00005013977) #25	OAT (ENSEASG00005013980) #26	NKX1-2 (ENSEASG00005013984) #27	LHPP (ENSEASG00005013985) #28	FAM53B (ENSEASG00005013989) #29	EEF1AKMT2 (ENSEASG00005013990) #30	ABRAXAS2 (ENSEASG00005034209) #31	ZRANB1 (ENSEASG00005013996) #32	CTBP2 (ENSEASG00005014001) #33	TEX36 (ENSEASG00005030922) #34	EDRF1 (ENSEASG00005014012) #35	MMP21 (ENSEASG00005014020) #36	UROS (ENSEASG00005014025) #37
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00940000163882	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00940000163005.b #15	ENSGT00390000017384 #16	ENSGT00940000163005.a #15	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.h #33	ENSGT00940000154430.g.b #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36
Megabat	MODERN SPECIES	2961														HMX3 (ENSPVAG00000015584) #20	HMX2 (ENSPVAG00000015587) #21	BUB3 (ENSPVAG00000015589) #22
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00940000163882	ENSGT00390000005511 #12	ENSGT00940000162108.tb	ENSGT00940000154525.b.a #13	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430.g.b #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Microbat	MODERN SPECIES	2281																BUB3 (ENSMLUG00000017732) #22
Greater horseshoe bat	MODERN SPECIES	7	TACC2 (ENSRFEG00010010381)	BTBD16 (ENSRFEG00010010148)	PLEKHA1 (ENSRFEG00010010055) #7	HTRA1 (ENSRFEG00010010004) #9	ENSRFEG00010009865 #10	C10orf120 (ENSRFEG00010009794) #12	ENSRFEG00010009653	CUZD1 (ENSRFEG00010009612) #13	ENSRFEG00010009592 #16	ENSRFEG00010009483 #16	PSTK (ENSRFEG00010009389) #17	IKZF5 (ENSRFEG00010009357) #18	ENSRFEG00010009328 #19	HMX3 (ENSRFEG00010009301) #20	HMX2 (ENSRFEG00010009282) #21	BUB3 (ENSRFEG00010009105) #22	GPR26 (ENSRFEG00010009057) #23	CPXM2 (ENSRFEG00010009013) #24	CHST15 (ENSRFEG00010008970) #25	ENSRFEG00010008862 #26	NKX1-2 (ENSRFEG00010008843) #27	LHPP (ENSRFEG00010008786) #28	FAM53B (ENSRFEG00010008714) #29	EEF1AKMT2 (ENSRFEG00010008621) #30	ENSRFEG00010008598 #31	ZRANB1 (ENSRFEG00010008551) #32	ENSRFEG00010008512 #33	ENSRFEG00010008497	TEX36 (ENSRFEG00010008422) #34	EDRF1 (ENSRFEG00010008318) #35	MMP21 (ENSRFEG00010008092) #36
Atlantogenata	ANCESTRAL SPECIES	76											ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Afrotheria	ANCESTRAL SPECIES	88											ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696
Tenrec	MODERN SPECIES	7906															HMX2 (ENSETEG00000008784) #21	BUB3 (ENSETEG00000008787) #22
Afrotheria_a	ANCESTRAL SPECIES	92											ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696
Hyrax	MODERN SPECIES	9644																BUB3 (ENSPCAG00000007736) #22
Elephant	MODERN SPECIES	537	PLEKHA1 (ENSLAFG00000007589) #7	HTRA1 (ENSLAFG00000007595) #9	ENSLAFG00000027577 #10	C10orf120 (ENSLAFG00000018686) #12	ENSLAFG00000001892	CUZD1 (ENSLAFG00000001895) #13	ENSLAFG00000023240 #15	ENSLAFG00000018729 #16	ENSLAFG00000017108	ENSLAFG00000012377 #16	PSTK (ENSLAFG00000029030) #17	IKZF5 (ENSLAFG00000012381) #18	ACADSB (ENSLAFG00000004375) #19	HMX3 (ENSLAFG00000021892) #20	HMX2 (ENSLAFG00000012760) #21	BUB3 (ENSLAFG00000012753) #22	GPR26 (ENSLAFG00000008737) #23	CPXM2 (ENSLAFG00000011034) #24	CHST15 (ENSLAFG00000006570) #25	OAT (ENSLAFG00000006793) #26	ENSLAFG00000027784	LHPP (ENSLAFG00000013934) #28	FAM53B (ENSLAFG00000006874) #29	EEF1AKMT2 (ENSLAFG00000007509) #30	ABRAXAS2 (ENSLAFG00000007513) #31	ZRANB1 (ENSLAFG00000015221) #32	ENSLAFG00000015229 #33	TEX36 (ENSLAFG00000013261) #34	EDRF1 (ENSLAFG00000013265) #35	MMP21 (ENSLAFG00000013270) #36	UROS (ENSLAFG00000013271) #37
Xenarthra	ANCESTRAL SPECIES	829											ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22
Armadillo	MODERN SPECIES	3266											PSTK (ENSDNOG00000045363) #17	IKZF5 (ENSDNOG00000011974) #18	ACADSB (ENSDNOG00000034380) #19	HMX3 (ENSDNOG00000017924) #20	HMX2 (ENSDNOG00000007320) #21	BUB3 (ENSDNOG00000007315) #22
Sloth	MODERN SPECIES	13704															HMX2 (ENSCHOG00000010204) #21	BUB3 (ENSCHOG00000010213) #22
Marsupialia	ANCESTRAL SPECIES		ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000005511 #12	ENSGT00940000162108	ENSGT00950000183145.D ##10	ENSGT00940000154525.b.a #13	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00950000182946.d.a	ENSGT00950000182946.c.a.b	ENSGT00950000182946.c.a.a	ENSGT00940000156169	ENSGT00940000157373	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Opossum	DUPLICATION
Opossum	MODERN SPECIES		ENSMODG00000038482	BTBD16 (ENSMODG00000008285)	PLEKHA1 (ENSMODG00000008263) #7	HTRA1 (ENSMODG00000008235) #9	ENSMODG00000008170 #10	ENSMODG00000007900 #12	ENSMODG00000007895 #10	ENSMODG00000040843 ##10	CUZD1 (ENSMODG00000007863) #13	C10orf88 (ENSMODG00000007814) #16	PSTK (ENSMODG00000007808) #17	IKZF5 (ENSMODG00000038834) #18	ACADSB (ENSMODG00000007778) #19	HMX3 (ENSMODG00000007552) #20	HMX2 (ENSMODG00000007548) #21	ENSMODG00000007542 #22	GPR26 (ENSMODG00000007533) #23	CPXM2 (ENSMODG00000007502) #24	CHST15 (ENSMODG00000007407) #25	ENSMODG00000038857	ENSMODG00000024882	ENSMODG00000007358	ENSMODG00000045416	SLC16A12 (ENSMODG00000007350)	PANK1 (ENSMODG00000007301)	KIF20B (ENSMODG00000007283)	ENSMODG00000024887	HTR7 (ENSMODG00000006874)	ANKRD1 (ENSMODG00000006827)	PCGF5 (ENSMODG00000006798)	HECTD2 (ENSMODG00000006780)
Opossum	MODERN SPECIES	1	EPHA7 (ENSMODG00000018150)	ENSMODG00000044142	ENSMODG00000018165	ENSMODG00000023387	MAP3K7 (ENSMODG00000018170)	BACH2 (ENSMODG00000018176)	GJA10 (ENSMODG00000018178)	CASP8AP2 (ENSMODG00000018180)	ENSMODG00000036973	MDN1 (ENSMODG00000018213)	LYRM2 (ENSMODG00000018270)	ANKRD6 (ENSMODG00000018273)	RRAGD (ENSMODG00000018275)	ENSMODG00000018277	GABRR2 (ENSMODG00000018278)	ENSMODG00000049570 #22	GABRR1 (ENSMODG00000018279)	PM20D2 (ENSMODG00000018281)	SRSF12 (ENSMODG00000018282)	ENSMODG00000050642	PNRC1 (ENSMODG00000018284)	RNGTT (ENSMODG00000018289)	SPACA1 (ENSMODG00000018292)	ENSMODG00000018294	AKIRIN2 (ENSMODG00000018297)	ORC3 (ENSMODG00000018304)	RARS2 (ENSMODG00000018307)	SLC35A1 (ENSMODG00000018310)	CFAP206 (ENSMODG00000018314)	C2H6orf163 (ENSMODG00000041425)	SMIM8 (ENSMODG00000042548)
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000162108	ENSGT00950000183145.D ##10	ENSGT00940000154525.b.a #13	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00950000182946.d.a	ENSGT00950000182946.c.a.b	ENSGT00950000182946.c.a.a	ENSGT00940000156169	ENSGT00940000157373.b	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000162108	ENSGT00950000183145.D ##10	ENSGT00940000154525.b.a #13	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00950000182946.d.a	ENSGT00950000182946.c.a.b	ENSGT00950000182946.c.a.a	ENSGT00940000156169	ENSGT00940000157373.b	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750	ENSGT00940000155648.B
Diprotodontia_a	DUPLICATION
Diprotodontia_a	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.e #22
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	564																ENSVURG00010006318 #22
Common wonbat	MODERN SPECIES	563																ENSVURG00010006310 #22
koala	MODERN SPECIES	244	ENSPCIG00000029936	ENSPCIG00000029942	LIPN (ENSPCIG00000029944)	LIPM (ENSPCIG00000029947)	ANKRD22 (ENSPCIG00000033168)	STAMBPL1 (ENSPCIG00000029952)	ACTA2 (ENSPCIG00000029954)	ENSPCIG00000016460	CH25H (ENSPCIG00000023128)	ENSPCIG00000023123	LIPA (ENSPCIG00000023124)	OAT (ENSPCIG00000014184) #26	NKX1-2 (ENSPCIG00000023121) #27	LHPP (ENSPCIG00000023115) #28	FAM53B (ENSPCIG00000032462) #29	ENSPCIG00000023109 #22	EEF1AKMT2 (ENSPCIG00000023106) #30	ABRAXAS2 (ENSPCIG00000023103) #31	ENSPCIG00000023097	ZRANB1 (ENSPCIG00000023095) #32	ENSPCIG00000023084 #33	ENSPCIG00000023079	EDRF1 (ENSPCIG00000023062) #35	MMP21 (ENSPCIG00000022891) #36	UROS (ENSPCIG00000022887) #37	BCCIP (ENSPCIG00000022885)	DHX32 (ENSPCIG00000022881)	FANK1 (ENSPCIG00000022878)	ADAM12 (ENSPCIG00000022814)	ENSPCIG00000019059	INSYN2A (ENSPCIG00000011681)
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00390000012112 #11	ENSGT00390000005511 #12	ENSGT00940000162108	ENSGT00950000183145.D ##10	ENSGT00940000154525.b.a #13	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a.f #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00950000182946.d.b	ENSGT00950000182946.d.a	ENSGT00950000182946.c.a.b	ENSGT00950000182946.c.a.a	ENSGT00940000156169	ENSGT00940000157373.b	ENSGT00940000155989	ENSGT01010000222287.B.a.a.a.a	ENSGT00390000000883	ENSGT00940000153956.a	ENSGT00940000155896	ENSGT00940000157750
koala	MODERN SPECIES	150					ENSPCIG00000025829 #11	ENSPCIG00000025831 #12	ENSPCIG00000025834	ENSPCIG00000032747 ##10	CUZD1 (ENSPCIG00000025837) #13	C10orf88 (ENSPCIG00000025838) #16	PSTK (ENSPCIG00000025839) #17	IKZF5 (ENSPCIG00000025840) #18	ENSPCIG00000025841 #19	HMX3 (ENSPCIG00000025842) #20	HMX2 (ENSPCIG00000025843) #21	ENSPCIG00000025845 #22	ENSPCIG00000026830	GPR26 (ENSPCIG00000026831) #23	CPXM2 (ENSPCIG00000026833) #24	ENSPCIG00000028203	CHST15 (ENSPCIG00000014522) #25	ENSPCIG00000009126	ENSPCIG00000009123	ENSPCIG00000009121	ENSPCIG00000009119	SLC16A12 (ENSPCIG00000009112)	ENSPCIG00000002392	ENSPCIG00000034252	KIF20B (ENSPCIG00000000668)	ENSPCIG00000015744	HTR7 (ENSPCIG00000015740)
Wallaby	MODERN SPECIES	9510															HMX2 (ENSMEUG00000010163) #21	BUB3 (ENSMEUG00000010182) #22
Tasmanian devil	MODERN SPECIES	1	BTBD16 (ENSSHAG00000010960)	PLEKHA1 (ENSSHAG00000024626) #7	HTRA1 (ENSSHAG00000009284) #9	ENSSHAG00000007803 #10	ENSSHAG00000007217 #12	ENSSHAG00000022182	ENSSHAG00000023839 ##10	ENSSHAG00000028811 #13	ENSSHAG00000011736 #13	C10orf88 (ENSSHAG00000024427) #16	ENSSHAG00000030670 #17	IKZF5 (ENSSHAG00000011508) #18	ACADSB (ENSSHAG00000000928) #19	HMX3 (ENSSHAG00000031226) #20	HMX2 (ENSSHAG00000029091) #21	BUB3 (ENSSHAG00000010372) #22	GPR26 (ENSSHAG00000030669) #23	CPXM2 (ENSSHAG00000023947) #24	ENSSHAG00000009520 #25	ENSSHAG00000001370	ENSSHAG00000002618	ENSSHAG00000021228	SLC16A12 (ENSSHAG00000014683)	PANK1 (ENSSHAG00000014245)	KIF20B (ENSSHAG00000013656)	ENSSHAG00000027737	HTR7 (ENSSHAG00000007861)	RPP30 (ENSSHAG00000007452)	ANKRD1 (ENSSHAG00000007323)	PCGF5 (ENSSHAG00000032079)	HECTD2 (ENSSHAG00000018873)
Platypus	MODERN SPECIES	7	ENSOANG00000031768	PLEKHA1 (ENSOANG00000007865) #7	HTRA1 (ENSOANG00000045001) #9	ENSOANG00000002000 #10	ENSOANG00000049858 ##10	ENSOANG00000045064 #10	ENSOANG00000020984 ##10	ENSOANG00000047128	CUZD1 (ENSOANG00000001997) #13	ENSOANG00000043341 #16	PSTK (ENSOANG00000001995) #17	IKZF5 (ENSOANG00000001994) #18	ACADSB (ENSOANG00000013324) #19	HMX3 (ENSOANG00000037629) #20	HMX2 (ENSOANG00000036447) #21	BUB3 (ENSOANG00000041516) #22	CPXM2 (ENSOANG00000038396) #24	ENSOANG00000030444	ENSOANG00000002087	ATE1 (ENSOANG00000047065)	FGFR2 (ENSOANG00000029096)	WDR11 (ENSOANG00000002737)	PLPP4 (ENSOANG00000036798)	SEC23IP (ENSOANG00000001533)	MCMBP (ENSOANG00000001532)	INPP5F (ENSOANG00000001530)	BAG3 (ENSOANG00000009317)	ENSOANG00000050160	RGS10 (ENSOANG00000012170)	GRK5 (ENSOANG00000004388)	PRDX3 (ENSOANG00000002979)
Sauria	ANCESTRAL SPECIES	8	ENSGT00940000156955 #9	ENSGT00950000183145.C ##10	ENSGT01030000235500	ENSGT00950000183145.E #10	ENSGT00940000163882	ENSGT00950000183145.A.b.a ##10	ENSGT00940000164475.a.b.b	ENSGT00940000154525.b.a #13	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.A.b.a ##10	ENSGT00950000183145.E #10	ENSGT00940000163882	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
tuatara	DUPLICATION
tuatara	MODERN SPECIES	1695	ENSSPUG00000015804	ATE1 (ENSSPUG00000015827)	NSMCE4A (ENSSPUG00000015836)	ENSSPUG00000015863	BTBD16 (ENSSPUG00000015930)	ENSSPUG00000015948	PLEKHA1 (ENSSPUG00000015964) #7	HTRA1 (ENSSPUG00000015982) #9	ENSSPUG00000016067 ##10	C10orf88 (ENSSPUG00000016259) #16	ENSSPUG00000016310	PSTK (ENSSPUG00000016345) #17	IKZF5 (ENSSPUG00000016359) #18	ACADSB (ENSSPUG00000016372) #19	HMX3 (ENSSPUG00000016381) #20	ENSSPUG00000016401 #22	ENSSPUG00000016416 #22
tuatara	MODERN SPECIES	1695																ENSSPUG00000016416 #22	ENSSPUG00000016401 #22	HMX3 (ENSSPUG00000016381) #20	ACADSB (ENSSPUG00000016372) #19	IKZF5 (ENSSPUG00000016359) #18	PSTK (ENSSPUG00000016345) #17	ENSSPUG00000016310	C10orf88 (ENSSPUG00000016259) #16	ENSSPUG00000016067 ##10	HTRA1 (ENSSPUG00000015982) #9	PLEKHA1 (ENSSPUG00000015964) #7	ENSSPUG00000015948	BTBD16 (ENSSPUG00000015930)	ENSSPUG00000015863	NSMCE4A (ENSSPUG00000015836)	ATE1 (ENSSPUG00000015827)
Episquamata	ANCESTRAL SPECIES	2	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.A.b.a ##10	ENSGT00950000183145.E #10	ENSGT00940000163882	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Laterata	ANCESTRAL SPECIES		ENSGT00500000044926	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.C ##10	ENSGT00940000154525.b.a #13	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Common wall lizard	MODERN SPECIES	13	ENSPMRG00000006275	ENSPMRG00000006269	ENSPMRG00000006230 #10	ENSPMRG00000006207 #10	ENSPMRG00000006189 #10	ENSPMRG00000006176 ##10	CUZD1 (ENSPMRG00000006167) #13	C10orf88 (ENSPMRG00000006156) #16	ENSPMRG00000006144	PSTK (ENSPMRG00000006125) #17	IKZF5 (ENSPMRG00000006110) #18	ACADSB (ENSPMRG00000006103) #19	ENSPMRG00000006097	HMX3 (ENSPMRG00000006089) #20	HMX2 (ENSPMRG00000006086) #21	BUB3 (ENSPMRG00000006076) #22	GPR26 (ENSPMRG00000006065) #23	CPXM2 (ENSPMRG00000006029) #24	CHST15 (ENSPMRG00000006004) #25	OAT (ENSPMRG00000005967) #26	ENSPMRG00000005952	LHPP (ENSPMRG00000005937) #28	FAM53B (ENSPMRG00000005920) #29	EEF1AKMT2 (ENSPMRG00000005908) #30	ENSPMRG00000005902	ABRAXAS2 (ENSPMRG00000005892) #31	ZRANB1 (ENSPMRG00000005886) #32	CTBP2 (ENSPMRG00000005876) #33	ENSPMRG00000005869	TEX36 (ENSPMRG00000005865) #34	EDRF1 (ENSPMRG00000005859) #35
Argentine black and white tegu	MODERN SPECIES	58						ENSSMRG00000004482 ##10	ENSSMRG00000004488 ##10	ENSSMRG00000004505 ##10	C10orf88 (ENSSMRG00000004535) #16	ENSSMRG00000004550	PSTK (ENSSMRG00000004569) #17	IKZF5 (ENSSMRG00000004571) #18	ACADSB (ENSSMRG00000004574) #19	HMX3 (ENSSMRG00000004577) #20	HMX2 (ENSSMRG00000004581) #21	BUB3 (ENSSMRG00000004592) #22	ENSSMRG00000004627	GPR26 (ENSSMRG00000004632) #23	CPXM2 (ENSSMRG00000004643) #24	CHST15 (ENSSMRG00000004684) #25	OAT (ENSSMRG00000004707) #26	NKX1-2 (ENSSMRG00000004710) #27	LHPP (ENSSMRG00000004798) #28	FAM53B (ENSSMRG00000004817) #29	EEF1AKMT2 (ENSSMRG00000004821) #30	ABRAXAS2 (ENSSMRG00000004833) #31	ZRANB1 (ENSSMRG00000004853) #32	CTBP2 (ENSSMRG00000004886) #33	ENSSMRG00000004947	ENSSMRG00000004954	EDRF1 (ENSSMRG00000004996) #35
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.A.b.a ##10	ENSGT00950000183145.E #10	ENSGT00940000163882	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Elapidae	ANCESTRAL SPECIES	4	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.A.b.a ##10	ENSGT00950000183145.E #10	ENSGT00940000163882	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.b #23	ENSGT00950000183001.a.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37
Elapidae_a	ANCESTRAL SPECIES		ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.A.b.a ##10	ENSGT00940000154525.b.a #13	ENSGT01030000236508	ENSGT00950000183145.E #10	ENSGT00940000163882	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.A.b.a ##10	ENSGT00940000154525.b.a #13	ENSGT01030000236508	ENSGT00950000183145.E #10	ENSGT00940000163882	ENSGT00390000017384 #16	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Eastern brown snake	MODERN SPECIES	25	BTBD16 (ENSPTXG00000011894)	PLEKHA1 (ENSPTXG00000011895) #7	HTRA1 (ENSPTXG00000011896) #9	ENSPTXG00000011897 ##10	ENSPTXG00000011898	ENSPTXG00000011899 ##10	ENSPTXG00000011900 ##10	ENSPTXG00000011901 ##10	ENSPTXG00000011902	ENSPTXG00000011903 #16	PSTK (ENSPTXG00000011904) #17	IKZF5 (ENSPTXG00000011905) #18	ACADSB (ENSPTXG00000011906) #19	HMX3 (ENSPTXG00000011907) #20	HMX2 (ENSPTXG00000011908) #21	BUB3 (ENSPTXG00000011909) #22	ENSPTXG00000011910	GPR26 (ENSPTXG00000011911) #23	CPXM2 (ENSPTXG00000011912) #24	CHST15 (ENSPTXG00000011913) #25	OAT (ENSPTXG00000011914) #26	NKX1-2 (ENSPTXG00000011915) #27	LHPP (ENSPTXG00000011916) #28	FAM53B (ENSPTXG00000011917) #29	EEF1AKMT2 (ENSPTXG00000011918) #30	ABRAXAS2 (ENSPTXG00000011919) #31	ZRANB1 (ENSPTXG00000011920) #32	CTBP2 (ENSPTXG00000011921) #33	TEX36 (ENSPTXG00000011922) #34	EDRF1 (ENSPTXG00000011923) #35	UROS (ENSPTXG00000011924) #37
Mainland tiger snake	MODERN SPECIES		ENSNSUG00000001027	BTBD16 (ENSNSUG00000000997)	PLEKHA1 (ENSNSUG00000000993) #7	HTRA1 (ENSNSUG00000000969) #9	ENSNSUG00000000967 ##10	ENSNSUG00000000962 #13	ENSNSUG00000000957	ENSNSUG00000000956 #10	ENSNSUG00000000933	C10orf88 (ENSNSUG00000000899) #16	PSTK (ENSNSUG00000000895) #17	IKZF5 (ENSNSUG00000000891) #18	ACADSB (ENSNSUG00000000887) #19	HMX3 (ENSNSUG00000000884) #20	HMX2 (ENSNSUG00000000883) #21	BUB3 (ENSNSUG00000000878) #22	GPR26 (ENSNSUG00000000874) #23	CPXM2 (ENSNSUG00000000866) #24	CHST15 (ENSNSUG00000000864) #25	OAT (ENSNSUG00000000859) #26	LHPP (ENSNSUG00000000857) #28	FAM53B (ENSNSUG00000000856) #29	EEF1AKMT2 (ENSNSUG00000000854) #30	ABRAXAS2 (ENSNSUG00000000823) #31	ZRANB1 (ENSNSUG00000000817) #32	CTBP2 (ENSNSUG00000000680) #33	EDRF1 (ENSNSUG00000000562) #35	UROS (ENSNSUG00000000411) #37	BCCIP (ENSNSUG00000000404)	FANK1 (ENSNSUG00000000334)	ADAM12 (ENSNSUG00000000295)
Blue-lipped sea krait	MODERN SPECIES	2646														HMX3 (ENSLLTG00000001663) #20	HMX2 (ENSLLTG00000001658) #21	BUB3 (ENSLLTG00000001650) #22
Indian cobra	MODERN SPECIES	3	HTRA1 (ENSNNAG00000004719) #9	ENSNNAG00000004693 ##10	ENSNNAG00000004671 ##10	ENSNNAG00000004649	ENSNNAG00000004527 #10	ENSNNAG00000004497 ##10	ENSNNAG00000003976 ##10	ENSNNAG00000003929	C10orf88 (ENSNNAG00000003898) #16	ENSNNAG00000003842	PSTK (ENSNNAG00000003820) #17	IKZF5 (ENSNNAG00000003799) #18	ACADSB (ENSNNAG00000003781) #19	HMX3 (ENSNNAG00000003758) #20	HMX2 (ENSNNAG00000003744) #21	BUB3 (ENSNNAG00000003731) #22	ENSNNAG00000003714	ENSNNAG00000003699 #23	ENSNNAG00000003675 #23	CPXM2 (ENSNNAG00000003642) #24	CHST15 (ENSNNAG00000003620) #25	ENSNNAG00000003603	OAT (ENSNNAG00000003584) #26	ENSNNAG00000003572	LHPP (ENSNNAG00000003472) #28	FAM53B (ENSNNAG00000003446) #29	EEF1AKMT2 (ENSNNAG00000003438) #30	ABRAXAS2 (ENSNNAG00000003424) #31	ZRANB1 (ENSNNAG00000003411) #32	CTBP2 (ENSNNAG00000003385) #33	ENSNNAG00000003361
Lizard	MODERN SPECIES	2	ENSACAG00000027662	ENSACAG00000005789	ENSACAG00000037493	CFAP46 (ENSACAG00000005868)	ENSACAG00000021034	ENSACAG00000043412 ##10	ENSACAG00000017438 #13	C10orf88 (ENSACAG00000017448) #16	ENSACAG00000042520	ENSACAG00000017452	PSTK (ENSACAG00000017467) #17	IKZF5 (ENSACAG00000040076) #18	ACADSB (ENSACAG00000017471) #19	HMX3 (ENSACAG00000017490) #20	HMX2 (ENSACAG00000017493) #21	BUB3 (ENSACAG00000017494) #22	GPR26 (ENSACAG00000017503) #23	CPXM2 (ENSACAG00000017504) #24	CHST15 (ENSACAG00000017532) #25	ENSACAG00000040555	ENSACAG00000039920	ENSACAG00000040270	OAT (ENSACAG00000017543) #26	ENSACAG00000022361	LHPP (ENSACAG00000017564) #28	ENSACAG00000043228	ENSACAG00000044309	FAM53B (ENSACAG00000014398) #29	eef1akmt2 (ENSACAG00000038120) #30	ABRAXAS2 (ENSACAG00000014423) #31	ZRANB1 (ENSACAG00000014485) #32
Archelosauria	ANCESTRAL SPECIES	10	ENSGT00940000156955 #9	ENSGT00950000183145.C ##10	ENSGT01030000235500	ENSGT00950000183145.E #10	ENSGT00940000163882	ENSGT00950000183145.A.b.a ##10	ENSGT00940000164475.a.b.b	ENSGT00940000154525.b.a #13	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Archosauria	ANCESTRAL SPECIES	7	ENSGT00950000183145.D ##10	ENSGT00950000183145.E #10	ENSGT01030000235500	ENSGT00950000183145.C ##10	ENSGT00940000163882	ENSGT00950000183145.A.b.a ##10	ENSGT00940000164475.a.b.b	ENSGT00940000154525.b.a #13	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Aves	ANCESTRAL SPECIES	6	ENSGT00950000183145.D ##10	ENSGT00950000183145.E #10	ENSGT01030000235500	ENSGT00950000183145.C ##10	ENSGT00940000163882.e.a	ENSGT00950000183145.A.b.a ##10	ENSGT00940000164475.a.b.b.a	ENSGT00940000154525.b.a #13	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Neognathae	ANCESTRAL SPECIES	7	ENSGT00950000183145.D ##10	ENSGT00950000183145.E #10	ENSGT01030000235500	ENSGT00950000183145.C ##10	ENSGT00940000163882.e.a	ENSGT00950000183145.A.b.a ##10	ENSGT00940000154525.b.a #13	ENSGT00940000163882.f	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00940000163882.e.b	ENSGT00950000183145.D ##10	ENSGT00950000183145.E #10	ENSGT01030000235500	ENSGT00950000183145.C ##10	ENSGT00940000163882.e.a	ENSGT00940000154525.b.a #13	ENSGT00940000163882.f	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Passeriformes	ANCESTRAL SPECIES	10	ENSGT00940000156955 #9	ENSGT00940000163882.e.b	ENSGT00950000183145.D ##10	ENSGT00950000183145.E #10	ENSGT01030000235500	ENSGT00950000183145.C ##10	ENSGT00940000154525.b.a #13	ENSGT00940000163882.f	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00950000182865.b.b.b.c.b	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00950000183683	ENSGT00390000014797 #35	ENSGT00390000009853 #37
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00940000163882.e.b	ENSGT00950000183145.D ##10	ENSGT00950000183145.E #10	ENSGT01030000235500	ENSGT00950000183145.C ##10	ENSGT00940000154525.b.a #13	ENSGT00940000163882.f	ENSGT00940000163882.e.a	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00950000182865.b.b.b.c.b	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00950000183683	ENSGT00390000014797 #35	ENSGT00390000009853 #37
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00500000044926	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.D ##10	ENSGT00940000154525.b.a #13	ENSGT00940000163882.f	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00950000182865.b.b.b.c.b	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00950000183683	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00940000155447	ENSGT00500000044926	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.D ##10	ENSGT00940000163882.e.a	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00950000182865.b.b.b.c.b	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00950000183683	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Common canary	MODERN SPECIES	7	ATE1 (ENSSCAG00000013795)	NSMCE4A (ENSSCAG00000013790)	TACC2 (ENSSCAG00000013757)	PLEKHA1 (ENSSCAG00000013721) #7	HTRA1 (ENSSCAG00000013709) #9	ENSSCAG00000013688	ENSSCAG00000013676	ENSSCAG00000013649 #10	ENSSCAG00000013633 #13	ENSSCAG00000013608	ENSSCAG00000013599 #16	ENSSCAG00000013593	PSTK (ENSSCAG00000013588) #17	IKZF5 (ENSSCAG00000013584) #18	ACADSB (ENSSCAG00000013578) #19	BUB3 (ENSSCAG00000013570) #22	GPR26 (ENSSCAG00000013565) #23	CPXM2 (ENSSCAG00000013552) #24	CHST15 (ENSSCAG00000013544) #25	ENSSCAG00000013531	OAT (ENSSCAG00000013523) #26	LHPP (ENSSCAG00000013513) #28	EEF1AKMT2 (ENSSCAG00000013502) #30	ABRAXAS2 (ENSSCAG00000013495) #31	ZRANB1 (ENSSCAG00000013492) #32	CTBP2 (ENSSCAG00000013485) #33	ENSSCAG00000013479	EDRF1 (ENSSCAG00000013392) #35	UROS (ENSSCAG00000013356) #37	BCCIP (ENSSCAG00000013344)	DHX32 (ENSSCAG00000013331)
Zebra finch	MODERN SPECIES	28	FGFR2 (ENSTGUG00000011228)	ATE1 (ENSTGUG00000011274)	NSMCE4A (ENSTGUG00000011287)	TACC2 (ENSTGUG00000011300)	PLEKHA1 (ENSTGUG00000011311) #7	HTRA1 (ENSTGUG00000011319) #9	ENSTGUG00000011310 ##10	ENSTGUG00000019976	ENSTGUG00000018513 #16	ENSTGUG00000011344	PSTK (ENSTGUG00000011358) #17	IKZF5 (ENSTGUG00000023212) #18	ACADSB (ENSTGUG00000011363) #19	HMX3 (ENSTGUG00000011379) #20	HMX2 (ENSTGUG00000011380) #21	BUB3 (ENSTGUG00000011382) #22	GPR26 (ENSTGUG00000019570) #23	CPXM2 (ENSTGUG00000011397) #24	CHST15 (ENSTGUG00000011423) #25	ENSTGUG00000011432	OAT (ENSTGUG00000011436) #26	ENSTGUG00000022969	LHPP (ENSTGUG00000011442) #28	FAM53B (ENSTGUG00000011449) #29	EEF1AKMT2 (ENSTGUG00000011451) #30	ABRAXAS2 (ENSTGUG00000011455) #31	ZRANB1 (ENSTGUG00000011458) #32	CTBP2 (ENSTGUG00000011466) #33	ENSTGUG00000016414	EDRF1 (ENSTGUG00000011472) #35	UROS (ENSTGUG00000011481) #37
Medium ground finch	MODERN SPECIES	72	ATE1 (ENSGFOG00000013766)	NSMCE4A (ENSGFOG00000013776)	TACC2 (ENSGFOG00000013784)	PLEKHA1 (ENSGFOG00000013792) #7	HTRA1 (ENSGFOG00000013803) #9	ENSGFOG00000013807	ENSGFOG00000013816	ENSGFOG00000013821	ENSGFOG00000013822	C10orf88 (ENSGFOG00000013824) #16	ENSGFOG00000013826	PSTK (ENSGFOG00000013828) #17	IKZF5 (ENSGFOG00000013829) #18	ACADSB (ENSGFOG00000013830) #19	HMX2 (ENSGFOG00000013831) #21	BUB3 (ENSGFOG00000013834) #22	GPR26 (ENSGFOG00000013835) #23	CPXM2 (ENSGFOG00000013837) #24	CHST15 (ENSGFOG00000013840) #25	OAT (ENSGFOG00000013842) #26	LHPP (ENSGFOG00000013844) #28	EEF1AKMT2 (ENSGFOG00000013845) #30	ABRAXAS2 (ENSGFOG00000013846) #31	ZRANB1 (ENSGFOG00000006329) #32	CTBP2 (ENSGFOG00000006333) #33	EDRF1 (ENSGFOG00000006339) #35	UROS (ENSGFOG00000006355) #37	BCCIP (ENSGFOG00000006370)	DHX32 (ENSGFOG00000006380)	ADAM12 (ENSGFOG00000006402)	C10orf90 (ENSGFOG00000006514)
Flycatcher	MODERN SPECIES	25	ATE1 (ENSFALG00000002151)	NSMCE4A (ENSFALG00000002150)	TACC2 (ENSFALG00000002148)	PLEKHA1 (ENSFALG00000002147) #7	HTRA1 (ENSFALG00000028171) #9	ENSFALG00000002135 #10	ENSFALG00000025833	ENSFALG00000004924 ##10	ENSFALG00000023413	ENSFALG00000004913 #13	C10orf88 (ENSFALG00000028462) #16	ENSFALG00000004871	IKZF5 (ENSFALG00000004728) #18	ACADSB (ENSFALG00000024790) #19	HMX3 (ENSFALG00000026829) #20	BUB3 (ENSFALG00000004735) #22	ENSFALG00000028168	GPR26 (ENSFALG00000004740) #23	CPXM2 (ENSFALG00000004744) #24	CHST15 (ENSFALG00000004749) #25	ENSFALG00000004758	OAT (ENSFALG00000004768) #26	NKX1-2 (ENSFALG00000004783) #27	LHPP (ENSFALG00000004799) #28	FAM53B (ENSFALG00000004809) #29	EEF1AKMT2 (ENSFALG00000024735) #30	ABRAXAS2 (ENSFALG00000025047) #31	ZRANB1 (ENSFALG00000004837) #32	CTBP2 (ENSFALG00000004849) #33	ENSFALG00000024991	EDRF1 (ENSFALG00000001018) #35
Great tit	MODERN SPECIES	26	TACC2 (ENSPMJG00000005700)	PLEKHA1 (ENSPMJG00000005718) #7	HTRA1 (ENSPMJG00000005725) #9	ENSPMJG00000005727	ENSPMJG00000005730	ENSPMJG00000005731 ##10	ENSPMJG00000005732	ENSPMJG00000005734 ##10	C10orf88 (ENSPMJG00000005738) #16	ENSPMJG00000005740	IKZF5 (ENSPMJG00000005744) #18	PSTK (ENSPMJG00000005749) #17	ACADSB (ENSPMJG00000005752) #19	HMX3 (ENSPMJG00000005758) #20	HMX2 (ENSPMJG00000005760) #21	BUB3 (ENSPMJG00000005761) #22	GPR26 (ENSPMJG00000005767) #23	CPXM2 (ENSPMJG00000005769) #24	CHST15 (ENSPMJG00000005775) #25	ENSPMJG00000005788	OAT (ENSPMJG00000005814) #26	LHPP (ENSPMJG00000005818) #28	FAM53B (ENSPMJG00000005835) #29	EEF1AKMT2 (ENSPMJG00000005841) #30	ABRAXAS2 (ENSPMJG00000005844) #31	ZRANB1 (ENSPMJG00000005856) #32	CTBP2 (ENSPMJG00000005884) #33	ENSPMJG00000005905	EDRF1 (ENSPMJG00000005907) #35	UROS (ENSPMJG00000005911) #37	BCCIP (ENSPMJG00000005912)
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00940000157052	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT01030000235500	ENSGT00950000183145.E #10	ENSGT00940000163882.e.a	ENSGT00940000154525.b.a #13	ENSGT00940000163882.f	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Kakapo	MODERN SPECIES	22	ATE1 (ENSSHBG00005003603)	NSMCE4A (ENSSHBG00005003627)	TACC2 (ENSSHBG00005003706)	PLEKHA1 (ENSSHBG00005004075) #7	HTRA1 (ENSSHBG00005004092) #9	ENSSHBG00005004131	ENSSHBG00005004148 #10	ENSSHBG00005004175	C10orf88 (ENSSHBG00005004187) #16	ENSSHBG00005004196	PSTK (ENSSHBG00005004212) #17	IKZF5 (ENSSHBG00005004221) #18	ACADSB (ENSSHBG00005004229) #19	HMX3 (ENSSHBG00005004243) #20	HMX2 (ENSSHBG00005004253) #21	BUB3 (ENSSHBG00005004261) #22	GPR26 (ENSSHBG00005004264) #23	CPXM2 (ENSSHBG00005004275) #24	CHST15 (ENSSHBG00005004287) #25	OAT (ENSSHBG00005004295) #26	NKX1-2 (ENSSHBG00005004300) #27	LHPP (ENSSHBG00005004303) #28	FAM53B (ENSSHBG00005004307) #29	EEF1AKMT2 (ENSSHBG00005004312) #30	ABRAXAS2 (ENSSHBG00005004319) #31	ZRANB1 (ENSSHBG00005004326) #32	CTBP2 (ENSSHBG00005004333) #33	ENSSHBG00005004341	EDRF1 (ENSSHBG00005004438) #35	UROS (ENSSHBG00005004544) #37	BCCIP (ENSSHBG00005004551)
Golden eagle	MODERN SPECIES	2	ENSACCG00020006968	PLEKHA1 (ENSACCG00020006872) #7	ENSACCG00020006849	HTRA1 (ENSACCG00020006834) #9	ENSACCG00020006816	ENSACCG00020006805 #13	ENSACCG00020006746 #10	ENSACCG00020006663	C10orf88 (ENSACCG00020006628) #16	ENSACCG00020006582	PSTK (ENSACCG00020006551) #17	IKZF5 (ENSACCG00020006532) #18	ACADSB (ENSACCG00020006524) #19	HMX3 (ENSACCG00020006513) #20	HMX2 (ENSACCG00020006506) #21	BUB3 (ENSACCG00020006497) #22	GPR26 (ENSACCG00020006486) #23	CPXM2 (ENSACCG00020006462) #24	CHST15 (ENSACCG00020006444) #25	OAT (ENSACCG00020006431) #26	NKX1-2 (ENSACCG00020006421) #27	LHPP (ENSACCG00020006411) #28	FAM53B (ENSACCG00020006378) #29	EEF1AKMT2 (ENSACCG00020006356) #30	ABRAXAS2 (ENSACCG00020006346) #31	ZRANB1 (ENSACCG00020006333) #32	CTBP2 (ENSACCG00020006318) #33	TEX36 (ENSACCG00020006300) #34	EDRF1 (ENSACCG00020006265) #35	UROS (ENSACCG00020006244) #37	BCCIP (ENSACCG00020006208)
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00940000163882.e.a	ENSGT00950000183145.C.b ##10	ENSGT00940000154525.b.a.c.b #13	ENSGT00940000163882.f	ENSGT00940000154525.b.a.d #13	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Anatidae	ANCESTRAL SPECIES	4	ENSGT00940000156955 #9	ENSGT00940000154525.b.a.c.a #13	ENSGT00950000183145.C.a ##10	ENSGT00940000163882.e.a	ENSGT00940000154525.b.a.c.b #13	ENSGT00940000163882.f	ENSGT00950000183145.C.b ##10	ENSGT00940000154525.b.a.d #13	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Pink-footed goose	MODERN SPECIES	74				ENSABRG00000006774 ##10	ENSABRG00000006754	ENSABRG00000006728 #13	ENSABRG00000006699 ##10	CUZD1 (ENSABRG00000006669) #13	C10orf88 (ENSABRG00000006659) #16	ENSABRG00000006640	PSTK (ENSABRG00000006637) #17	IKZF5 (ENSABRG00000006630) #18	ACADSB (ENSABRG00000006622) #19	HMX3 (ENSABRG00000006612) #20	HMX2 (ENSABRG00000006606) #21	BUB3 (ENSABRG00000006598) #22	GPR26 (ENSABRG00000006566) #23	CPXM2 (ENSABRG00000006558) #24	CHST15 (ENSABRG00000006544) #25	OAT (ENSABRG00000006520) #26	NKX1-2 (ENSABRG00000006517) #27	ENSABRG00000006514	LHPP (ENSABRG00000006505) #28	FAM53B (ENSABRG00000006493) #29	EEF1AKMT2 (ENSABRG00000006480) #30	ABRAXAS2 (ENSABRG00000006469) #31	ZRANB1 (ENSABRG00000006463) #32	CTBP2 (ENSABRG00000006461) #33	TEX36 (ENSABRG00000006456) #34	EDRF1 (ENSABRG00000006414) #35	UROS (ENSABRG00000006392) #37
Duck	MODERN SPECIES	24	ATE1 (ENSAPLG00000012854)	NSMCE4A (ENSAPLG00000013184)	TACC2 (ENSAPLG00000013559)	PLEKHA1 (ENSAPLG00000013754) #7	HTRA1 (ENSAPLG00000014182) #9	ENSAPLG00000017490 #13	ENSAPLG00000028379 ##10	ENSAPLG00000022800 #13	ENSAPLG00000002332	C10orf88 (ENSAPLG00000018529) #16	ENSAPLG00000015412	PSTK (ENSAPLG00000015335) #17	IKZF5 (ENSAPLG00000015301) #18	ACADSB (ENSAPLG00000015129) #19	HMX3 (ENSAPLG00000025450) #20	BUB3 (ENSAPLG00000014959) #22	GPR26 (ENSAPLG00000014879) #23	ENSAPLG00000029693 #24	ENSAPLG00000014617 #24	OAT (ENSAPLG00000015424) #26	NKX1-2 (ENSAPLG00000018196) #27	LHPP (ENSAPLG00000015176) #28	FAM53B (ENSAPLG00000015172) #29	EEF1AKMT2 (ENSAPLG00000015137) #30	ABRAXAS2 (ENSAPLG00000014971) #31	ZRANB1 (ENSAPLG00000014747) #32	CTBP2 (ENSAPLG00000014447) #33	TEX36 (ENSAPLG00000013143) #34	EDRF1 (ENSAPLG00000012708) #35	UROS (ENSAPLG00000012701) #37	BCCIP (ENSAPLG00000012566)
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00940000163882.e.a	ENSGT00950000183145.C.b ##10	ENSGT00940000163882.f	ENSGT00950000183145.A.b.a ##10	ENSGT00940000154525.b.a.d #13	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227
Japanese quail	MODERN SPECIES	24	TACC2 (ENSCJPG00005020158)	PLEKHA1 (ENSCJPG00005020159) #7	HTRA1 (ENSCJPG00005020160) #9	ENSCJPG00005020161 #13	ENSCJPG00005020162	ENSCJPG00005020163 ##10	ENSCJPG00005020164 ##10	ENSCJPG00005020166	C10orf88 (ENSCJPG00005020167) #16	ENSCJPG00005020168	PSTK (ENSCJPG00005020169) #17	IKZF5 (ENSCJPG00005020170) #18	ACADSB (ENSCJPG00005020171) #19	HMX3 (ENSCJPG00005020174) #20	HMX2 (ENSCJPG00005020175) #21	BUB3 (ENSCJPG00005020176) #22	GPR26 (ENSCJPG00005020183) #23	CPXM2 (ENSCJPG00005020184) #24	CHST15 (ENSCJPG00005000893) #25	OAT (ENSCJPG00005000924) #26	ENSCJPG00005000989	LHPP (ENSCJPG00005001010) #28	FAM53B (ENSCJPG00005001041) #29	ENSCJPG00005001056 #30	ABRAXAS2 (ENSCJPG00005001064) #31	ZRANB1 (ENSCJPG00005001074) #32	CTBP2 (ENSCJPG00005001082) #33	TEX36 (ENSCJPG00005001093) #34	EDRF1 (ENSCJPG00005001118) #35	UROS (ENSCJPG00005001169) #37	BCCIP (ENSCJPG00005001184)
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00940000163882.e.a	ENSGT00950000183145.A.b.a ##10	ENSGT00940000154525.b.a.d #13	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227
Chicken	MODERN SPECIES	35	TACC2 (ENSGALG00010001465)	PLEKHA1 (ENSGALG00010001702) #7	HTRA1 (ENSGALG00010001705) #9	ENSGALG00010001707 #10	ENSGALG00010001726	ENSGALG00010003199 #10	ENSGALG00010001743 ##10	CUZD1 (ENSGALG00010001755) #13	C10orf88 (ENSGALG00010001759) #16	ENSGALG00010001764	IKZF5 (ENSGALG00010001793) #18	PSTK (ENSGALG00010001798) #17	ACADSB (ENSGALG00010001811) #19	HMX3 (ENSGALG00010001815) #20	HMX2 (ENSGALG00010001821) #21	BUB3 (ENSGALG00010001832) #22	GPR26 (ENSGALG00010001842) #23	CPXM2 (ENSGALG00010001852) #24	CHST15 (ENSGALG00010001856) #25	OAT (ENSGALG00010001877) #26	ENSGALG00010001884	LHPP (ENSGALG00010001898) #28	FAM53B (ENSGALG00010001910) #29	EEF1AKMT2 (ENSGALG00010001915) #30	FAM175B (ENSGALG00010001935) #31	ZRANB1 (ENSGALG00010002401) #32	CTBP2 (ENSGALG00010002419) #33	TEX36 (ENSGALG00010002426) #34	EDRF1 (ENSGALG00010002445) #35	UROS (ENSGALG00010002466) #37	BCCIP (ENSGALG00010002487)
Turkey	MODERN SPECIES	28	DHX32 (ENSMGAG00000011735)	ENSMGAG00000011712 #35	UROS (ENSMGAG00000011725) #37	TEX36 (ENSMGAG00000017663) #34	ENSMGAG00000021006 #35	ZRANB1 (ENSMGAG00000011701) #32	ENSMGAG00000011703 #33	ABRAXAS2 (ENSMGAG00000011692) #31	ENSMGAG00000011686 #30	ENSMGAG00000011677 #28	ENSMGAG00000011675 #26	ENSMGAG00000011673 #25	ENSMGAG00000011662 #24	GPR26 (ENSMGAG00000011624) #23	ENSMGAG00000011617 #21	ENSMGAG00000011619 #22	HMX3 (ENSMGAG00000011613) #20	ACADSB (ENSMGAG00000011603) #19	ENSMGAG00000017710 #17	ENSMGAG00000011599 #18	ENSMGAG00000011584	ENSMGAG00000011564 ##10	ENSMGAG00000022374 ##10	ENSMGAG00000011568 #13	ENSMGAG00000011580 #16	ENSMGAG00000011551 #9	ENSMGAG00000011530 #7	ENSMGAG00000011516	ENSMGAG00000011490	ENSMGAG00000011508	ENSMGAG00000011456
African ostrich	MODERN SPECIES	463							ENSSCUG00000007854	ENSSCUG00000007853	ENSSCUG00000007847 ##10	CUZD1 (ENSSCUG00000007842) #13	ENSSCUG00000007840 #16	ENSSCUG00000007839	PSTK (ENSSCUG00000007836) #17	IKZF5 (ENSSCUG00000007835) #18	ACADSB (ENSSCUG00000007834) #19	BUB3 (ENSSCUG00000007830) #22	GPR26 (ENSSCUG00000007827) #23	CPXM2 (ENSSCUG00000007823) #24	CHST15 (ENSSCUG00000007819) #25	OAT (ENSSCUG00000007810) #26	LHPP (ENSSCUG00000007807) #28	FAM53B (ENSSCUG00000007804) #29	EEF1AKMT2 (ENSSCUG00000007801) #30	ABRAXAS2 (ENSSCUG00000007799) #31	ZRANB1 (ENSSCUG00000007796) #32	ENSSCUG00000007795	ENSSCUG00000007793	ENSSCUG00000007792 #35	UROS (ENSSCUG00000007791) #37	BCCIP (ENSSCUG00000007788)	DHX32 (ENSSCUG00000007786)
Australian saltwater crocodile	MODERN SPECIES	68	ENSCPRG00005010028	ENSCPRG00005010020	ENSCPRG00005010017 ##10	ENSCPRG00005010015 ##10	ENSCPRG00005010013 ##10	ENSCPRG00005009997	CUZD1 (ENSCPRG00005009971) #13	C10orf88 (ENSCPRG00005009963) #16	ENSCPRG00005009952	PSTK (ENSCPRG00005009943) #17	IKZF5 (ENSCPRG00005009941) #18	ENSCPRG00005009939	ACADSB (ENSCPRG00005009928) #19	HMX3 (ENSCPRG00005009925) #20	HMX2 (ENSCPRG00005009921) #21	BUB3 (ENSCPRG00005009920) #22	GPR26 (ENSCPRG00005009894) #23	CPXM2 (ENSCPRG00005009835) #24	ENSCPRG00005009822	CHST15 (ENSCPRG00005009813) #25	OAT (ENSCPRG00005009806) #26	LHPP (ENSCPRG00005009804) #28	FAM53B (ENSCPRG00005009799) #29	EEF1AKMT2 (ENSCPRG00005009789) #30	ABRAXAS2 (ENSCPRG00005009783) #31	ZRANB1 (ENSCPRG00005009776) #32	CTBP2 (ENSCPRG00005009769) #33	TEX36 (ENSCPRG00005009741) #34	EDRF1 (ENSCPRG00005009723) #35	UROS (ENSCPRG00005009716) #37	BCCIP (ENSCPRG00005009713)
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00500000044926	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT00940000163882	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00390000011476	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT01030000235500.a	ENSGT00940000163882.d	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Emydidae	ANCESTRAL SPECIES	6	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT01030000235500.a	ENSGT00940000163882.d	ENSGT00950000183145.A.a ##10	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Three-toed box turtle	MODERN SPECIES	39	ATE1 (ENSTMTG00000018984)	NSMCE4A (ENSTMTG00000019033)	ENSTMTG00000019055	BTBD16 (ENSTMTG00000019086)	PLEKHA1 (ENSTMTG00000019123) #7	HTRA1 (ENSTMTG00000019179) #9	ENSTMTG00000019204 ##10	ENSTMTG00000019231	ENSTMTG00000019289	C10orf88 (ENSTMTG00000019303) #16	PSTK (ENSTMTG00000019320) #17	IKZF5 (ENSTMTG00000019326) #18	ACADSB (ENSTMTG00000019334) #19	HMX3 (ENSTMTG00000019354) #20	HMX2 (ENSTMTG00000019363) #21	BUB3 (ENSTMTG00000019371) #22	GPR26 (ENSTMTG00000019385) #23	ENSTMTG00000019402 #24	ENSTMTG00000019417 #24	CHST15 (ENSTMTG00000019442) #25	OAT (ENSTMTG00000019462) #26	NKX1-2 (ENSTMTG00000019477) #27	LHPP (ENSTMTG00000019511) #28	FAM53B (ENSTMTG00000019517) #29	EEF1AKMT2 (ENSTMTG00000019525) #30	ABRAXAS2 (ENSTMTG00000019534) #31	ZRANB1 (ENSTMTG00000019546) #32	CTBP2 (ENSTMTG00000019568) #33	TEX36 (ENSTMTG00000019599) #34	EDRF1 (ENSTMTG00000019646) #35	UROS (ENSTMTG00000019712) #37
painted turtle	MODERN SPECIES	15	RGS10 (ENSCPBG00000001134)	TIAL1 (ENSCPBG00000001103)	BAG3 (ENSCPBG00000001092)	PLEKHA1 (ENSCPBG00000001016) #7	HTRA1 (ENSCPBG00000000966) #9	ENSCPBG00000000282 #10	ENSCPBG00000000175	ENSCPBG00000000160	ENSCPBG00000000152 ##10	C10orf88 (ENSCPBG00000000128) #16	ENSCPBG00000000116	IKZF5 (ENSCPBG00000028099) #18	ACADSB (ENSCPBG00000028097) #19	HMX3 (ENSCPBG00000028093) #20	HMX2 (ENSCPBG00000028090) #21	BUB3 (ENSCPBG00000028089) #22	GPR26 (ENSCPBG00000028085) #23	CPXM2 (ENSCPBG00000028082) #24	CHST15 (ENSCPBG00000028078) #25	OAT (ENSCPBG00000028074) #26	NKX1-2 (ENSCPBG00000028073) #27	LHPP (ENSCPBG00000028072) #28	FAM53B (ENSCPBG00000028070) #29	EEF1AKMT2 (ENSCPBG00000028069) #30	ABRAXAS2 (ENSCPBG00000028067) #31	ZRANB1 (ENSCPBG00000028065) #32	CTBP2 (ENSCPBG00000028062) #33	ENSCPBG00000028058	EDRF1 (ENSCPBG00000028056) #35	UROS (ENSCPBG00000028054) #37	BCCIP (ENSCPBG00000028052)
Testudinidae	ANCESTRAL SPECIES	9	ENSGT00940000157052	ENSGT00940000161718	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00950000183145.E #10	ENSGT01030000235500.a	ENSGT00940000163882.d	ENSGT00950000183145.A.a.c ##10	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00390000009853 #37	ENSGT00390000000696
Goode s thornscrub tortoise	MODERN SPECIES	21	BTBD16 (ENSGEVG00005020101)	PLEKHA1 (ENSGEVG00005009217) #7	HTRA1 (ENSGEVG00005009396) #9	ENSGEVG00005009567 #10	ENSGEVG00005009616 #10	ENSGEVG00005009786	ENSGEVG00005009832	ENSGEVG00005009897 ##10	C10orf88 (ENSGEVG00005009973) #16	ENSGEVG00005009999	PSTK (ENSGEVG00005010124) #17	IKZF5 (ENSGEVG00005010148) #18	ACADSB (ENSGEVG00005010261) #19	HMX3 (ENSGEVG00005011045) #20	HMX2 (ENSGEVG00005011080) #21	BUB3 (ENSGEVG00005011128) #22	GPR26 (ENSGEVG00005011147) #23	CPXM2 (ENSGEVG00005011196) #24	CHST15 (ENSGEVG00005011451) #25	OAT (ENSGEVG00005011512) #26	NKX1-2 (ENSGEVG00005011543) #27	LHPP (ENSGEVG00005011572) #28	FAM53B (ENSGEVG00005011589) #29	EEF1AKMT2 (ENSGEVG00005011617) #30	ABRAXAS2 (ENSGEVG00005011649) #31	ZRANB1 (ENSGEVG00005011667) #32	CTBP2 (ENSGEVG00005011743) #33	TEX36 (ENSGEVG00005011932) #34	EDRF1 (ENSGEVG00005012029) #35	UROS (ENSGEVG00005012099) #37	BCCIP (ENSGEVG00005012179)
Abingdon island giant tortoise	MODERN SPECIES	1955							ENSCABG00000014857	ENSCABG00000014856	ENSCABG00000014854 ##10	ENSCABG00000014853 #16	PSTK (ENSCABG00000014852) #17	IKZF5 (ENSCABG00000014850) #18	ACADSB (ENSCABG00000014847) #19	HMX3 (ENSCABG00000014843) #20	HMX2 (ENSCABG00000014840) #21	BUB3 (ENSCABG00000014835) #22	GPR26 (ENSCABG00000014830) #23	CPXM2 (ENSCABG00000014723) #24	CHST15 (ENSCABG00000014721) #25	OAT (ENSCABG00000014677) #26	NKX1-2 (ENSCABG00000014675) #27	LHPP (ENSCABG00000014672) #28	FAM53B (ENSCABG00000014667) #29	EEF1AKMT2 (ENSCABG00000014664) #30	ABRAXAS2 (ENSCABG00000014662) #31	ZRANB1 (ENSCABG00000014658) #32	CTBP2 (ENSCABG00000014649) #33
Chinese turtle	MODERN SPECIES	2099							C10orf88 (ENSPSIG00000007835) #16	ENSPSIG00000007841	PSTK (ENSPSIG00000007956) #17	IKZF5 (ENSPSIG00000008029) #18	ACADSB (ENSPSIG00000008049) #19	ENSPSIG00000001185	ENSPSIG00000001208	HMX3 (ENSPSIG00000008269) #20	HMX2 (ENSPSIG00000008282) #21	BUB3 (ENSPSIG00000008291) #22	GPR26 (ENSPSIG00000008465) #23	CPXM2 (ENSPSIG00000008503) #24	CHST15 (ENSPSIG00000008647) #25	OAT (ENSPSIG00000008761) #26	LHPP (ENSPSIG00000009629) #28	FAM53B (ENSPSIG00000009711) #29	EEF1AKMT2 (ENSPSIG00000009720) #30	ABRAXAS2 (ENSPSIG00000010008) #31	ENSPSIG00000010014	CTBP2 (ENSPSIG00000010025) #33	ENSPSIG00000001220	EDRF1 (ENSPSIG00000010245) #35	UROS (ENSPSIG00000011315) #37	BCCIP (ENSPSIG00000011321)	ENSPSIG00000011522
Anura	ANCESTRAL SPECIES	179								ENSGT00940000163882.b	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00940000158045 #32	ENSGT00940000154430 #33
Leishan spiny toad	MODERN SPECIES	9	ENSLLEG00000030118	ATE1 (ENSLLEG00000030100)	ENSLLEG00000030064 #16	NSMCE4A (ENSLLEG00000030045)	TACC2 (ENSLLEG00000029844)	HTRA1 (ENSLLEG00000029621) #9	ENSLLEG00000029588 ##10	ENSLLEG00000029566	ENSLLEG00000029534	PSTK (ENSLLEG00000029522) #17	IKZF5 (ENSLLEG00000029492) #18	ACADSB (ENSLLEG00000029470) #19	HMX3 (ENSLLEG00000029455) #20	GBA2 (ENSLLEG00000028430)	HMX2 (ENSLLEG00000028332) #21	BUB3 (ENSLLEG00000028262) #22	GPR26 (ENSLLEG00000028244) #23	CPXM2 (ENSLLEG00000028178) #24	ENSLLEG00000028167	CHST15 (ENSLLEG00000028004) #25	ENSLLEG00000027933	OAT (ENSLLEG00000027829) #26	NKX1-2 (ENSLLEG00000027814) #27	LHPP (ENSLLEG00000027758) #28	EEF1AKMT2 (ENSLLEG00000027662) #30	ABRAXAS2 (ENSLLEG00000027625) #31	ZRANB1 (ENSLLEG00000027590) #32	ENSLLEG00000027296	NKX6-2 (ENSLLEG00000027241)	INPP5A (ENSLLEG00000027113)	PWWP2B (ENSLLEG00000027069)
Frog	MODERN SPECIES	7	lhpp (ENSXETG00000031230) #28	eef1akmt2 (ENSXETG00000030721) #30	abraxas2 (ENSXETG00000023627) #31	zranb1 (ENSXETG00000023629) #32	ctbp2 (ENSXETG00000023631) #33	ENSXETG00000039487	cuzd1 (ENSXETG00000030070)	C10orf88 (ENSXETG00000031007) #16	XB990656 [provisional:adam9] (ENSXETG00000031289)	pstk (ENSXETG00000039097) #17	ikzf5 (ENSXETG00000009559) #18	ENSXETG00000046532	acadsb (ENSXETG00000009561) #19	hmx3 (ENSXETG00000009562) #20	hmx2 (ENSXETG00000027771) #21	bub3 (ENSXETG00000009564) #22	gpr26 (ENSXETG00000009569) #23	aplp1 (ENSXETG00000009571) #24	chst15 (ENSXETG00000046777) #25	ENSXETG00000049094	oat (ENSXETG00000009576) #26	plpp4 (ENSXETG00000009592)	wdr11 (ENSXETG00000015603)	fgfr2 (ENSXETG00000015592)	ate1 (ENSXETG00000015591)	XB5717875 [provisional:plac8] (ENSXETG00000015589)	tacc2 (ENSXETG00000015587)	ENSXETG00000039419	plekha1 (ENSXETG00000015586) #7	htra1 (ENSXETG00000015580) #9	g6pc1.2 (ENSXETG00000015579)
Coelacanth	MODERN SPECIES	1889																BUB3 (ENSLACG00000000990) #22	ENSLACG00000003792
Actinopterygii	ANCESTRAL SPECIES	7	ENSGT00940000153912.A	ENSGT00940000155910	ENSGT00530000064550.B	ENSGT00940000160064.a.a	ENSGT00390000015768	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00940000163882	ENSGT00390000017384 #16	ENSGT00940000166847	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00530000063474.A	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35	ENSGT00940000159140.d #36
Neopterygii	ANCESTRAL SPECIES	10	ENSGT00940000155910.c.b.b	ENSGT00530000064550.B	ENSGT00940000160064.a.a	ENSGT00390000015768	ENSGT00940000169682	ENSGT00940000155157 #7	ENSGT00940000156955 #9	ENSGT00940000163882	ENSGT00390000017384 #16	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286 #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00730000114509	ENSGT00950000183001.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719 #25	ENSGT00630000089895 #26	ENSGT00940000162535 #27	ENSGT00940000159002 #28	ENSGT00530000063371.B #29	ENSGT00390000013399 #30	ENSGT00530000063424.a #31	ENSGT00530000063474.A	ENSGT00940000158045 #32	ENSGT00940000154430 #33	ENSGT00390000012491 #34	ENSGT00390000014797 #35
Osteoglossocephalai	ANCESTRAL SPECIES	117	ENSGT00940000158879	ENSGT00940000153912.A.a	ENSGT00940000155910.c.b.b	ENSGT00390000015768.i.b	ENSGT00940000169682	ENSGT00940000155157.b #7	ENSGT00940000156955.a.b #9	ENSGT00390000017384 #16	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00940000158286.e.a #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.d #23	ENSGT00730000114509	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430 #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227
Osteoglossiformes	ANCESTRAL SPECIES	74	ENSGT01100000263491.a.b.a.a.a.a.a.b.mb.a	ENSGT00390000007586.a.a.b	ENSGT00940000153912.A.a	ENSGT00940000155910.c.b.a.b.a.b	ENSGT00390000015768.i.a.n	ENSGT00940000155157.b #7	ENSGT00940000156955.a.b #9	ENSGT00390000017384 #16	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035 #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00940000158286.e.a #20	ENSGT00940000160392.o.a #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414.r #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063424.a.q #31	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.a.b #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227	ENSGT00940000160878.f
P. kingsleyae	MODERN SPECIES	26	dnajc9 (ENSPKIG00000002650)	ENSPKIG00000002670	ENSPKIG00000002686	ENSPKIG00000002705	GRID1 (ENSPKIG00000002744)	ENSPKIG00000002803	PLEKHA1 (ENSPKIG00000002866) #7	htra1b (ENSPKIG00000002932) #9	C10orf88 (ENSPKIG00000002972) #16	zgc:174164 (ENSPKIG00000002999)	PSTK (ENSPKIG00000003035) #17	ikzf5 (ENSPKIG00000003059) #18	ACADSB (ENSPKIG00000003087) #19	HMX3 (ENSPKIG00000003121) #20	hmx2 (ENSPKIG00000003134) #21	bub3 (ENSPKIG00000003151) #22	GPR26 (ENSPKIG00000003175) #23	CPXM2 (ENSPKIG00000003218) #24	CHST15 (ENSPKIG00000003364) #25	oat (ENSPKIG00000003389) #26	lhpp (ENSPKIG00000003434) #28	fam53b (ENSPKIG00000003495) #29	abraxas2 (ENSPKIG00000003536) #31	hpdl (ENSPKIG00000003595)	ZRANB1 (ENSPKIG00000003627) #32	ctbp2a (ENSPKIG00000003666) #33	mmp21 (ENSPKIG00000003703) #36	uros (ENSPKIG00000003751) #37	bccip (ENSPKIG00000003838)	dhx32a (ENSPKIG00000003903)	FANK1 (ENSPKIG00000003940)
Asian bonytongue	MODERN SPECIES	16	dnajc9 (ENSSFOG00015009690)	ENSSFOG00015009678	ENSSFOG00015009668	ENSSFOG00015009663	GRID1 (ENSSFOG00015009596)	WAPL (ENSSFOG00015009509)	PLEKHA1 (ENSSFOG00015009461) #7	htra1b (ENSSFOG00015009397) #9	C10orf88 (ENSSFOG00015009366) #16	zgc:174164 (ENSSFOG00015009320)	PSTK (ENSSFOG00015009307) #17	ikzf5 (ENSSFOG00015027459) #18	ACADSB (ENSSFOG00015009242) #19	hmx3a (ENSSFOG00015030207) #20	HMX2 (ENSSFOG00015031908) #21	bub3 (ENSSFOG00015009190) #22	GPR26 (ENSSFOG00015009734) #23	CPXM2 (ENSSFOG00015009124) #24	CHST15 (ENSSFOG00015009059) #25	oat (ENSSFOG00015009016) #26	lhpp (ENSSFOG00015008977) #28	fam53b (ENSSFOG00015028133) #29	abraxas2 (ENSSFOG00015008897) #31	hpdl (ENSSFOG00015024455)	ZRANB1 (ENSSFOG00015008836) #32	CTBP2 (ENSSFOG00015031457) #33	mmp21 (ENSSFOG00015008730) #36	uros (ENSSFOG00015008698) #37	bccip (ENSSFOG00015028323)	dhx32a (ENSSFOG00015008596)	ADAM12 (ENSSFOG00015008550)
Clupeocephala	ANCESTRAL SPECIES	73	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.d.a.a.a #23	ENSGT00730000114509	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g
Euteleosteomorpha	ANCESTRAL SPECIES	56	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.d.a.a.a #23	ENSGT00730000114509	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g
Acanthomorphata	ANCESTRAL SPECIES	12	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.d.a.a.a #23	ENSGT00730000114509	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000168551	ENSGT00940000166669.b	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Cod	MODERN SPECIES	9	ENSGMOG00000034198	lrit1b (ENSGMOG00000027227)	rgrb (ENSGMOG00000008610)	slc18a3b (ENSGMOG00000019848)	ENSGMOG00000008619	ENSGMOG00000008630	ENSGMOG00000034729	ENSGMOG00000008643	PSTK (ENSGMOG00000008669) #17	ENSGMOG00000029424	ENSGMOG00000036756	ENSGMOG00000026458	IKZF5 (ENSGMOG00000035925) #18	ACADSB (ENSGMOG00000019024) #19	HMX3 (ENSGMOG00000019034) #20	bub3 (ENSGMOG00000019042) #22	ENSGMOG00000025981	GPR26 (ENSGMOG00000019051) #23	CPXM2 (ENSGMOG00000019057) #24	CHST15 (ENSGMOG00000027306) #25	oat (ENSGMOG00000016188) #26	lhpp (ENSGMOG00000016219) #28	fam53b (ENSGMOG00000023221) #29	hpdl (ENSGMOG00000016244)	ZRANB1 (ENSGMOG00000016259) #32	CTBP2 (ENSGMOG00000015768) #33	bccip (ENSGMOG00000026112)	DHX32 (ENSGMOG00000002501)	ENSGMOG00000009161	ENSGMOG00000022739	ENSGMOG00000008545
Euacanthomorphacea	ANCESTRAL SPECIES	21	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.d.a.a.a #23	ENSGT00730000114509	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g
Pinecone sodierfish	MODERN SPECIES	10	ENSMMDG00005024603	ENSMMDG00005024604	ENSMMDG00005024605	CHRM3 (ENSMMDG00005024606)	FMN2 (ENSMMDG00005024607)	csnk1e (ENSMMDG00005024608)	tmem184ba (ENSMMDG00005024622)	maff (ENSMMDG00005024623)	tomm22 (ENSMMDG00005024624)	dmc1 (ENSMMDG00005024625)	gspt1 (ENSMMDG00005024640)	rsl1d1 (ENSMMDG00005024721)	ENSMMDG00005024724	ACADSB (ENSMMDG00005024725) #19	HMX3 (ENSMMDG00005024726) #20	bub3 (ENSMMDG00005024727) #22	GPR26 (ENSMMDG00005024728) #23	CPXM2 (ENSMMDG00005024729) #24	CHST15 (ENSMMDG00005024730) #25	oat (ENSMMDG00005024731) #26	lhpp (ENSMMDG00005024732) #28	fam53b (ENSMMDG00005024733) #29	hpdl (ENSMMDG00005024734)	ZRANB1 (ENSMMDG00005024735) #32	CTBP2 (ENSMMDG00005024736) #33	mmp21 (ENSMMDG00005024737) #36	uros (ENSMMDG00005024738) #37	bccip (ENSMMDG00005024739)	dhx32a (ENSMMDG00005024740)	FANK1 (ENSMMDG00005024741)	ADAM12 (ENSMMDG00005024742)
Percomorphaceae	ANCESTRAL SPECIES	21	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.d.a.a.a #23	ENSGT00730000114509	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g
Tiger tail seahorse	MODERN SPECIES	330	fbxl15 (ENSHCOG00000019722)	pax2b (ENSHCOG00000019743)	chst3b (ENSHCOG00000019760)	GHITM (ENSHCOG00000019768)	ENSHCOG00000019831	CHAT (ENSHCOG00000019914)	slc18a3b (ENSHCOG00000019932)	rgrb (ENSHCOG00000019964)	lrit1b (ENSHCOG00000019974)	CDHR1 (ENSHCOG00000020016)	zgc:174164 (ENSHCOG00000020047)	PSTK (ENSHCOG00000020127) #17	IKZF5 (ENSHCOG00000020134) #18	ACADSB (ENSHCOG00000020163) #19	HMX3 (ENSHCOG00000020178) #20	bub3 (ENSHCOG00000020184) #22	GPR26 (ENSHCOG00000020193) #23	CPXM2 (ENSHCOG00000020211) #24	RAB5C (ENSHCOG00000020238)	ENSHCOG00000020248	DNAJC7 (ENSHCOG00000020290)	aclya (ENSHCOG00000020343)	ENSHCOG00000020376	becn1 (ENSHCOG00000020402)	ENSHCOG00000020464	ENSHCOG00000020481	ENSHCOG00000020491	PHOSPHO1 (ENSHCOG00000020497)	ENSHCOG00000020516	fkbp10b (ENSHCOG00000020574)	cpn1 (ENSHCOG00000020689)
Percomorphaceae_B	ANCESTRAL SPECIES	23	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00730000114509	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000171352	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g
Ovalentaria	ANCESTRAL SPECIES	13	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00730000114509	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000171352	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g
Atherinomorphae	ANCESTRAL SPECIES	10	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00730000114509	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g
Oryzias	ANCESTRAL SPECIES	11	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a
Oryzias_a	ANCESTRAL SPECIES	17	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a
Chinese medaka	MODERN SPECIES	1099	pax2b (ENSOSIG00000014974)	chst3b (ENSOSIG00000015064)	GHITM (ENSOSIG00000015065)	CDHR1 (ENSOSIG00000015077)	LRIT2 (ENSOSIG00000016120)	lrit1b (ENSOSIG00000016122)	rgrb (ENSOSIG00000016123)	slc18a3b (ENSOSIG00000016124)	CHAT (ENSOSIG00000016128)	ENSOSIG00000016669	zgc:174164 (ENSOSIG00000016672)	PSTK (ENSOSIG00000016677) #17	IKZF5 (ENSOSIG00000016680) #18	ACADSB (ENSOSIG00000016685) #19	HMX3 (ENSOSIG00000016807) #20	bub3 (ENSOSIG00000016813) #22	GPR26 (ENSOSIG00000016816) #23	CPXM2 (ENSOSIG00000016835) #24	CHST15 (ENSOSIG00000016934) #25	oat (ENSOSIG00000016955) #26	lhpp (ENSOSIG00000017246) #28	fam53b (ENSOSIG00000017249) #29	hpdl (ENSOSIG00000017250)	ZRANB1 (ENSOSIG00000017251) #32	ENSOSIG00000017255	mmp21 (ENSOSIG00000017266) #36	bccip (ENSOSIG00000017300)	dhx32a (ENSOSIG00000017305)	ADAM12 (ENSOSIG00000017517)	dock1 (ENSOSIG00000018381)	INSYN2A (ENSOSIG00000018441)
Japanese Medaka HdrR	MODERN SPECIES	10	ENSORLG00000029928	chst3b (ENSORLG00000009328)	GHITM (ENSORLG00000009358)	CDHR1 (ENSORLG00000009394)	LRIT2 (ENSORLG00000009406)	lrit1b (ENSORLG00000009414)	rgrb (ENSORLG00000009433)	slc18a3b (ENSORLG00000009439)	CHAT (ENSORLG00000009452)	ENSORLG00000009463	zgc:174164 (ENSORLG00000009489)	PSTK (ENSORLG00000009501) #17	IKZF5 (ENSORLG00000030579) #18	ACADSB (ENSORLG00000009544) #19	HMX3 (ENSORLG00000009549) #20	bub3 (ENSORLG00000009565) #22	GPR26 (ENSORLG00000009582) #23	CPXM2 (ENSORLG00000009590) #24	CHST15 (ENSORLG00000009599) #25	oat (ENSORLG00000009625) #26	lhpp (ENSORLG00000009657) #28	fam53b (ENSORLG00000009669) #29	hpdl (ENSORLG00000009680)	ZRANB1 (ENSORLG00000009697) #32	CTBP2 (ENSORLG00000009718) #33	ENSORLG00000024613	mmp21 (ENSORLG00000030297) #36	uros (ENSORLG00000009747) #37	bccip (ENSORLG00000029153)	dhx32a (ENSORLG00000009790)	ADAM12 (ENSORLG00000009815)
Oryzias_b	ANCESTRAL SPECIES	9	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a
Indian medaka	MODERN SPECIES	17	pax2b (ENSOMEG00000011620)	chst3b (ENSOMEG00000011589)	GHITM (ENSOMEG00000011580)	CDHR1 (ENSOMEG00000011565)	LRIT2 (ENSOMEG00000011543)	lrit1b (ENSOMEG00000011538)	rgrb (ENSOMEG00000011526)	slc18a3b (ENSOMEG00000011513)	CHAT (ENSOMEG00000000969)	ENSOMEG00000011457	zgc:174164 (ENSOMEG00000011351)	PSTK (ENSOMEG00000011301) #17	IKZF5 (ENSOMEG00000011314) #18	ACADSB (ENSOMEG00000011281) #19	HMX3 (ENSOMEG00000011254) #20	bub3 (ENSOMEG00000011241) #22	GPR26 (ENSOMEG00000011202) #23	CPXM2 (ENSOMEG00000011183) #24	CHST15 (ENSOMEG00000011121) #25	oat (ENSOMEG00000011081) #26	lhpp (ENSOMEG00000011048) #28	fam53b (ENSOMEG00000011007) #29	hpdl (ENSOMEG00000010990)	ZRANB1 (ENSOMEG00000010975) #32	ENSOMEG00000010921	mmp21 (ENSOMEG00000010850) #36	uros (ENSOMEG00000010827) #37	bccip (ENSOMEG00000010778)	dhx32a (ENSOMEG00000010746)	ADAM12 (ENSOMEG00000010655)	dock1 (ENSOMEG00000010526)
Javanese ricefish	MODERN SPECIES	10	pax2b (ENSOJAG00000020788)	chst3b (ENSOJAG00000020948)	GHITM (ENSOJAG00000020952)	ENSOJAG00000020993	LRIT2 (ENSOJAG00000021220)	lrit1b (ENSOJAG00000021226)	rgrb (ENSOJAG00000021233)	slc18a3b (ENSOJAG00000021247)	CHAT (ENSOJAG00000021268)	ENSOJAG00000021280	ENSOJAG00000021297	PSTK (ENSOJAG00000021416) #17	IKZF5 (ENSOJAG00000021430) #18	ACADSB (ENSOJAG00000021437) #19	HMX3 (ENSOJAG00000021496) #20	bub3 (ENSOJAG00000021510) #22	GPR26 (ENSOJAG00000021528) #23	CPXM2 (ENSOJAG00000021555) #24	CHST15 (ENSOJAG00000021714) #25	oat (ENSOJAG00000021724) #26	lhpp (ENSOJAG00000021793) #28	fam53b (ENSOJAG00000021808) #29	hpdl (ENSOJAG00000021824)	ZRANB1 (ENSOJAG00000021830) #32	CTBP2 (ENSOJAG00000021893) #33	mmp21 (ENSOJAG00000022184) #36	uros (ENSOJAG00000022219) #37	bccip (ENSOJAG00000022231)	ADAM12 (ENSOJAG00000022277)	ENSOJAG00000022470	ENSOJAG00000011978
Cyprinodontiformes	ANCESTRAL SPECIES	13	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00730000114509	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a
Aplocheiloidei	ANCESTRAL SPECIES	4	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000155495.C.a.a	ENSGT00530000063787.B.d.a	ENSGT00940000154974
Turquoise killifish	MODERN SPECIES	1621	ENSNFUG00015008653	pax2b (ENSNFUG00015008602)	chst3b (ENSNFUG00015008571)	GHITM (ENSNFUG00015008559)	CDHR1 (ENSNFUG00015007780)	lrit1b (ENSNFUG00015007685)	rgrb (ENSNFUG00015007674)	CHAT (ENSNFUG00015007656)	ENSNFUG00015007652	ENSNFUG00015007579	zgc:174164 (ENSNFUG00015007507)	PSTK (ENSNFUG00015007485) #17	Nfu_g_1_023152 (ENSNFUG00015007479) #18	ACADSB (ENSNFUG00015007424) #19	HMX3 (ENSNFUG00015007406) #20	BUB3 (ENSNFUG00015007398) #22	GPR26 (ENSNFUG00015007392) #23	CABZ01090975.1 (ENSNFUG00015024193) #24	ENSNFUG00015024168	DNALI1 (ENSNFUG00015024163)	CHST15 (ENSNFUG00015024160) #25	OAT (ENSNFUG00015024148) #26	lhpp (ENSNFUG00015024143) #28	FAM53B (ENSNFUG00015024141) #29	HPDL (ENSNFUG00015024139)	ZRANB1 (ENSNFUG00015024124) #32	ENSNFUG00015024032	ADAM12 (ENSNFUG00015023387)	ENSNFUG00015023339	FAM196A (ENSNFUG00015023337)	dock1 (ENSNFUG00015022465)
Mangrove rivulus	MODERN SPECIES	4	pax2b (ENSKMAG00000014284)	chst3b (ENSKMAG00000014250)	GHITM (ENSKMAG00000014215)	CDHR1 (ENSKMAG00000014173)	LRIT2 (ENSKMAG00000014142)	lrit1b (ENSKMAG00000014114)	rgrb (ENSKMAG00000014090)	slc18a3b (ENSKMAG00000014075)	CHAT (ENSKMAG00000014027)	ENSKMAG00000013972	zgc:174164 (ENSKMAG00000013918)	PSTK (ENSKMAG00000013892) #17	IKZF5 (ENSKMAG00000013872) #18	ACADSB (ENSKMAG00000013836) #19	HMX3 (ENSKMAG00000013830) #20	bub3 (ENSKMAG00000013809) #22	GPR26 (ENSKMAG00000013799) #23	CPXM2 (ENSKMAG00000013770) #24	CHST15 (ENSKMAG00000013712) #25	oat (ENSKMAG00000013673) #26	lhpp (ENSKMAG00000013643) #28	fam53b (ENSKMAG00000013624) #29	hpdl (ENSKMAG00000013534)	ZRANB1 (ENSKMAG00000013496) #32	CTBP2 (ENSKMAG00000013423) #33	mmp21 (ENSKMAG00000013383) #36	uros (ENSKMAG00000013364) #37	bccip (ENSKMAG00000013341)	ADAM12 (ENSKMAG00000013300)	INSYN2A (ENSKMAG00000013278)	dock1 (ENSKMAG00000012961)
Cyprinodontoidei	ANCESTRAL SPECIES	17	ENSGT00390000003595	ENSGT01080000257365.a.d	ENSGT01030000234586.B.a.a.a	ENSGT00940000157836.b	ENSGT00950000182983.A.a.a.b	ENSGT00940000160948	ENSGT00950000182961.a.a.c	ENSGT00390000003596	ENSGT00390000013260.B	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00730000114509	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000169101	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696
Poeciliinae	ANCESTRAL SPECIES	10	ENSGT00390000003595	ENSGT01080000257365.a.d	ENSGT01030000234586.B.a.a.a	ENSGT00940000157836.b	ENSGT00950000182983.A.a.a.b	ENSGT00940000160948	ENSGT00950000182961.a.a.c	ENSGT00390000003596	ENSGT00390000013260.B	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00730000114509	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000169101	ENSGT00940000154430.c.a #33	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g
Poecilia	ANCESTRAL SPECIES	15	ENSGT00390000003595	ENSGT01080000257365.a.d	ENSGT01030000234586.B.a.a.a	ENSGT00940000157836.b	ENSGT00950000182983.A.a.a.b	ENSGT00940000160948	ENSGT00950000182961.a.a.c	ENSGT00390000003596	ENSGT00390000013260.B	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00730000114509	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000169101	ENSGT00940000154430.c.a #33	ENSGT00940000171352	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696
NAME_6	ANCESTRAL SPECIES		ENSGT00390000003595	ENSGT01080000257365.a.d	ENSGT01030000234586.B.a.a.a	ENSGT00940000157836.b	ENSGT00950000182983.A.a.a.b	ENSGT00940000160948	ENSGT00950000182961.a.a.c	ENSGT00390000003596	ENSGT00390000013260.B	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00730000114509	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000169101	ENSGT00940000154430.c.a #33	ENSGT00940000171352	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g
Amazon molly	MODERN SPECIES	259	kcnj2a (ENSPFOG00000020437)	BTBD17 (ENSPFOG00000012121)	GPR142 (ENSPFOG00000012115)	map2k6 (ENSPFOG00000011774)	BTBD17 (ENSPFOG00000011760)	GPR142 (ENSPFOG00000011754)	gprc5c (ENSPFOG00000011734)	ENSPFOG00000020436	pde6gb (ENSPFOG00000011732)	ENSPFOG00000011711	ENSPFOG00000011678	PSTK (ENSPFOG00000011595) #17	IKZF5 (ENSPFOG00000011572) #18	ACADSB (ENSPFOG00000011496) #19	HMX3 (ENSPFOG00000011482) #20	bub3 (ENSPFOG00000011421) #22	ENSPFOG00000022326	GPR26 (ENSPFOG00000011400) #23	CPXM2 (ENSPFOG00000011220) #24	CHST15 (ENSPFOG00000011179) #25	oat (ENSPFOG00000011095) #26	lhpp (ENSPFOG00000011062) #28	fam53b (ENSPFOG00000011033) #29	hpdl (ENSPFOG00000010991)	ENSPFOG00000010897	ENSPFOG00000010606	mmp21 (ENSPFOG00000010508) #36	uros (ENSPFOG00000010471) #37	bccip (ENSPFOG00000010449)	mmp21 (ENSPFOG00000023394) #36	UROS (ENSPFOG00000010392) #37
Sailfin molly	MODERN SPECIES	471			kcnj2a (ENSPLAG00000008193)	map2k6 (ENSPLAG00000008209)	BTBD17 (ENSPLAG00000008223)	GPR142 (ENSPLAG00000008253)	gprc5c (ENSPLAG00000008262)	ENSPLAG00000008267	pde6gb (ENSPLAG00000008588)	ENSPLAG00000008637	ENSPLAG00000008654	PSTK (ENSPLAG00000008667) #17	IKZF5 (ENSPLAG00000008675) #18	ACADSB (ENSPLAG00000008705) #19	HMX3 (ENSPLAG00000008717) #20	bub3 (ENSPLAG00000008730) #22	GPR26 (ENSPLAG00000008754) #23	CPXM2 (ENSPLAG00000008785) #24	CHST15 (ENSPLAG00000008815) #25
Guppy	MODERN SPECIES	449	galr2a (ENSPREG00000007578)	KCNJ16 (ENSPREG00000007555)	kcnj2a (ENSPREG00000007547)	map2k6 (ENSPREG00000007511)	BTBD17 (ENSPREG00000007493)	GPR142 (ENSPREG00000007479)	gprc5c (ENSPREG00000007467)	ENSPREG00000007448	pde6gb (ENSPREG00000007437)	ENSPREG00000007371	ENSPREG00000007351	PSTK (ENSPREG00000007335) #17	IKZF5 (ENSPREG00000007320) #18	ACADSB (ENSPREG00000007280) #19	HMX3 (ENSPREG00000007254) #20	bub3 (ENSPREG00000007234) #22	GPR26 (ENSPREG00000007214) #23	CPXM2 (ENSPREG00000007148) #24	CHST15 (ENSPREG00000007056) #25	oat (ENSPREG00000006997) #26	lhpp (ENSPREG00000006958) #28	fam53b (ENSPREG00000006943) #29	hpdl (ENSPREG00000006930)	ENSPREG00000006907	ENSPREG00000006829	mmp21 (ENSPREG00000006771) #36	uros (ENSPREG00000006720) #37	bccip (ENSPREG00000006691)	dhx32a (ENSPREG00000006556)	ADAM12 (ENSPREG00000006491)	INSYN2A (ENSPREG00000006465)
Platyfish	MODERN SPECIES	1	galr2a (ENSXMAG00000016747)	KCNJ16 (ENSXMAG00000016746)	kcnj2a (ENSXMAG00000019862)	map2k6 (ENSXMAG00000016710)	BTBD17 (ENSXMAG00000016708)	GPR142 (ENSXMAG00000022856)	gprc5c (ENSXMAG00000016702)	ENSXMAG00000016697	pde6gb (ENSXMAG00000016693)	ENSXMAG00000021238	ENSXMAG00000016672	PSTK (ENSXMAG00000023548) #17	IKZF5 (ENSXMAG00000016661) #18	ACADSB (ENSXMAG00000016640) #19	HMX3 (ENSXMAG00000028551) #20	bub3 (ENSXMAG00000016612) #22	GPR26 (ENSXMAG00000016606) #23	CPXM2 (ENSXMAG00000016574) #24	CHST15 (ENSXMAG00000016569) #25	oat (ENSXMAG00000016554) #26	lhpp (ENSXMAG00000016538) #28	fam53b (ENSXMAG00000016533) #29	hpdl (ENSXMAG00000000449)	ENSXMAG00000029327	ENSXMAG00000019860	mmp21 (ENSXMAG00000016521) #36	uros (ENSXMAG00000016520) #37	bccip (ENSXMAG00000029181)	dhx32a (ENSXMAG00000016496)	ADAM12 (ENSXMAG00000016474)	INSYN2A (ENSXMAG00000016473)
NAME_4	DUPLICATION
NAME_4	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a.s #22
Sheepshead minnow	MODERN SPECIES	398	ENSCVAG00000016539	KCNJ16 (ENSCVAG00000016544)	kcnj2a (ENSCVAG00000016584)	map2k6 (ENSCVAG00000016632)	BTBD17 (ENSCVAG00000016643)	GPR142 (ENSCVAG00000016678)	gprc5c (ENSCVAG00000016688)	ENSCVAG00000016691	pde6gb (ENSCVAG00000016703)	ENSCVAG00000016724	ENSCVAG00000016730	PSTK (ENSCVAG00000016735) #17	IKZF5 (ENSCVAG00000016757) #18	ACADSB (ENSCVAG00000016804) #19	HMX3 (ENSCVAG00000016810) #20	bub3 (ENSCVAG00000016815) #22	GPR26 (ENSCVAG00000016830) #23	CPXM2 (ENSCVAG00000016846) #24	CHST15 (ENSCVAG00000016878) #25	oat (ENSCVAG00000016925) #26	lhpp (ENSCVAG00000016958) #28	fam53b (ENSCVAG00000016970) #29	hpdl (ENSCVAG00000016979)	ENSCVAG00000017030	CTBP2 (ENSCVAG00000017073) #33
NAME_4	ANCESTRAL SPECIES	22	ENSGT00390000003595	ENSGT01080000257365.a.d	ENSGT01030000234586.B.a.a.a	ENSGT00940000157836.b	ENSGT00950000182983.A.a.a.b	ENSGT00940000160948	ENSGT00950000182961.a.a.c	ENSGT00390000003596	ENSGT00390000013260.B	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a.t #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000169101	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g
Sheepshead minnow	DUPLICATION
Sheepshead minnow	MODERN SPECIES	31																ENSCVAG00000022197 #22
Sheepshead minnow	MODERN SPECIES	30																ENSCVAG00000022211 #22
Mummichog	MODERN SPECIES	2198	exoc7 (ENSFHEG00000010965)	galr2a (ENSFHEG00000010996)	KCNJ16 (ENSFHEG00000011006)	kcnj2a (ENSFHEG00000011010)	map2k6 (ENSFHEG00000011061)	BTBD17 (ENSFHEG00000011088)	GPR142 (ENSFHEG00000011122)	gprc5c (ENSFHEG00000011143)	pde6gb (ENSFHEG00000011161)	zgc:92749 (ENSFHEG00000011166)	ENSFHEG00000011216	PSTK (ENSFHEG00000011224) #17	IKZF5 (ENSFHEG00000011230) #18	ACADSB (ENSFHEG00000011258) #19	HMX3 (ENSFHEG00000011279) #20	bub3 (ENSFHEG00000011308) #22	GPR26 (ENSFHEG00000011333) #23	CPXM2 (ENSFHEG00000011390) #24	CHST15 (ENSFHEG00000011449) #25	oat (ENSFHEG00000011494) #26	lhpp (ENSFHEG00000011529) #28	fam53b (ENSFHEG00000011563) #29	hpdl (ENSFHEG00000011584)	ENSFHEG00000011604	ZRANB1 (ENSFHEG00000011656) #32	CTBP2 (ENSFHEG00000011695) #33	mmp21 (ENSFHEG00000011740) #36	uros (ENSFHEG00000011776) #37	bccip (ENSFHEG00000011800)	ADAM12 (ENSFHEG00000011836)	dock1 (ENSFHEG00000011910)
Ovalentaria_B	ANCESTRAL SPECIES	21	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000171352	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g
Cichlidae	ANCESTRAL SPECIES	15	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000154974
Pseudocrenilabrinae	ANCESTRAL SPECIES	9	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115.e	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00530000063787.B.d.a
Nile tilapia	MODERN SPECIES	20	chst3 (ENSONIG00000016064)	GHITM (ENSONIG00000016060)	CDHR1 (ENSONIG00000016056)	LRIT2 (ENSONIG00000016055)	lrit1b (ENSONIG00000016054)	rgrb (ENSONIG00000039506)	slc18a3b (ENSONIG00000020662)	CHAT (ENSONIG00000016047)	ENSONIG00000040667	ENSONIG00000016045	zgc:174164 (ENSONIG00000016041)	PSTK (ENSONIG00000016039) #17	IKZF5 (ENSONIG00000016036) #18	ACADSB (ENSONIG00000016035) #19	HMX3 (ENSONIG00000016033) #20	bub3 (ENSONIG00000016031) #22	GPR26 (ENSONIG00000016030) #23	CPXM2 (ENSONIG00000016028) #24	CHST15 (ENSONIG00000016026) #25	oat (ENSONIG00000016022) #26	lhpp (ENSONIG00000032849) #28	fam53b (ENSONIG00000016021) #29	hpdl (ENSONIG00000016018)	ENSONIG00000016012	ZRANB1 (ENSONIG00000016016) #32	mmp21 (ENSONIG00000016009) #36	uros (ENSONIG00000042838) #37	bccip (ENSONIG00000016006)	dhx32a (ENSONIG00000016005)	ADAM12 (ENSONIG00000015999)	INSYN2A (ENSONIG00000015997)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	7	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115.e	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000154974
Haplochromini	ANCESTRAL SPECIES	17	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115.e	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000154974
Burton s mouthbrooder	MODERN SPECIES	300	fbxl15 (ENSHBUG00000018679)	pax2b (ENSHBUG00000018765)	chst3b (ENSHBUG00000018774)	GHITM (ENSHBUG00000018825)	CDHR1 (ENSHBUG00000018837)	LRIT2 (ENSHBUG00000018840)	lrit1b (ENSHBUG00000018859)	rgrb (ENSHBUG00000018903)	CHAT (ENSHBUG00000018954)	ENSHBUG00000019066	zgc:174164 (ENSHBUG00000019084)	PSTK (ENSHBUG00000019103) #17	IKZF5 (ENSHBUG00000019115) #18	ACADSB (ENSHBUG00000019144) #19	HMX3 (ENSHBUG00000019151) #20	bub3 (ENSHBUG00000019161) #22	GPR26 (ENSHBUG00000019192) #23	CPXM2 (ENSHBUG00000019241) #24	CHST15 (ENSHBUG00000019250) #25	oat (ENSHBUG00000019260) #26	lhpp (ENSHBUG00000019306) #28	fam53b (ENSHBUG00000019315) #29	hpdl (ENSHBUG00000019326)	ZRANB1 (ENSHBUG00000019365) #32	ENSHBUG00000019483	mmp21 (ENSHBUG00000019529) #36	uros (ENSHBUG00000019555) #37	bccip (ENSHBUG00000019589)	dhx32a (ENSHBUG00000019742)	ADAM12 (ENSHBUG00000019769)	INSYN2A (ENSHBUG00000019788)
Haplochromini_A	ANCESTRAL SPECIES	16	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115.f	ENSGT00940000166115.e	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000154974
P. nyererei	MODERN SPECIES	364	pax2b (ENSPNYG00000000368)	chst3b (ENSPNYG00000000372)	GHITM (ENSPNYG00000000379)	CDHR1 (ENSPNYG00000000393)	LRIT2 (ENSPNYG00000000441)	lrit1b (ENSPNYG00000000450)	rgrb (ENSPNYG00000000461)	slc18a3b (ENSPNYG00000000470)	CHAT (ENSPNYG00000000475)	ENSPNYG00000000503	zgc:174164 (ENSPNYG00000000567)	PSTK (ENSPNYG00000001218) #17	IKZF5 (ENSPNYG00000001264) #18	ACADSB (ENSPNYG00000001269) #19	HMX3 (ENSPNYG00000001279) #20	bub3 (ENSPNYG00000001307) #22	GPR26 (ENSPNYG00000001315) #23	CPXM2 (ENSPNYG00000001329) #24	CHST15 (ENSPNYG00000001363) #25	oat (ENSPNYG00000001381) #26	lhpp (ENSPNYG00000001387) #28	fam53b (ENSPNYG00000001399) #29	hpdl (ENSPNYG00000001407)	ZRANB1 (ENSPNYG00000001475) #32	ENSPNYG00000001515	mmp21 (ENSPNYG00000001575) #36	uros (ENSPNYG00000001614) #37	bccip (ENSPNYG00000001654)	dhx32a (ENSPNYG00000001703)	ADAM12 (ENSPNYG00000001858)	dock1 (ENSPNYG00000002157)
Haplochromini_B	ANCESTRAL SPECIES	15	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115.f	ENSGT00940000166115.e	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000154974
Eastern happy	MODERN SPECIES	20	pax2b (ENSACLG00000004582)	chst3b (ENSACLG00000004566)	GHITM (ENSACLG00000004515)	CDHR1 (ENSACLG00000004438)	LRIT2 (ENSACLG00000004428)	lrit1b (ENSACLG00000004405)	rgrb (ENSACLG00000004374)	CHAT (ENSACLG00000004310)	ENSACLG00000004222	ENSACLG00000004188	zgc:174164 (ENSACLG00000004153)	PSTK (ENSACLG00000004141) #17	IKZF5 (ENSACLG00000004134) #18	ACADSB (ENSACLG00000004110) #19	HMX3 (ENSACLG00000004101) #20	bub3 (ENSACLG00000004091) #22	GPR26 (ENSACLG00000004083) #23	CPXM2 (ENSACLG00000004067) #24	CHST15 (ENSACLG00000004040) #25	ENSACLG00000004032	oat (ENSACLG00000004022) #26	lhpp (ENSACLG00000004011) #28	fam53b (ENSACLG00000004008) #29	hpdl (ENSACLG00000003946)	ZRANB1 (ENSACLG00000003903) #32	ENSACLG00000003829	mmp21 (ENSACLG00000003816) #36	uros (ENSACLG00000003787) #37	bccip (ENSACLG00000003741)	dhx32a (ENSACLG00000003726)	ADAM12 (ENSACLG00000003663)
Zebra mbuna	MODERN SPECIES	1111	pax2b (ENSMZEG00005001188)	chst3b (ENSMZEG00005001207)	GHITM (ENSMZEG00005001212)	CDHR1 (ENSMZEG00005001218)	LRIT2 (ENSMZEG00005001262)	lrit1b (ENSMZEG00005001280)	rgrb (ENSMZEG00005001295)	CHAT (ENSMZEG00005001337)	ENSMZEG00005001350	zgc:174164 (ENSMZEG00005001386)	zgc:174164 (ENSMZEG00005001420)	IKZF5 (ENSMZEG00005001432) #18	PSTK (ENSMZEG00005001430) #17	ACADSB (ENSMZEG00005001437) #19	HMX3 (ENSMZEG00005001465) #20	bub3 (ENSMZEG00005001489) #22	GPR26 (ENSMZEG00005001499) #23	CPXM2 (ENSMZEG00005001518) #24	CHST15 (ENSMZEG00005001525) #25	oat (ENSMZEG00005001530) #26	lhpp (ENSMZEG00005001542) #28	fam53b (ENSMZEG00005001571) #29	hpdl (ENSMZEG00005001580)	ZRANB1 (ENSMZEG00005001639) #32	ENSMZEG00005001655	mmp21 (ENSMZEG00005001717) #36	uros (ENSMZEG00005001738) #37	bccip (ENSMZEG00005001767)	dhx32a (ENSMZEG00005001790)	ADAM12 (ENSMZEG00005001803)	dock1 (ENSMZEG00005001868)
Lyretail cichlid	MODERN SPECIES	309	pax2b (ENSNBRG00000013660)	chst3b (ENSNBRG00000013630)	GHITM (ENSNBRG00000013602)	CDHR1 (ENSNBRG00000013530)	LRIT2 (ENSNBRG00000013521)	lrit1b (ENSNBRG00000013509)	rgrb (ENSNBRG00000013487)	slc18a3b (ENSNBRG00000013479)	CHAT (ENSNBRG00000013444)	ENSNBRG00000013385	zgc:174164 (ENSNBRG00000013344)	PSTK (ENSNBRG00000013328) #17	ENSNBRG00000013318 #18	ACADSB (ENSNBRG00000013292) #19	HMX3 (ENSNBRG00000013278) #20	bub3 (ENSNBRG00000013223) #22	GPR26 (ENSNBRG00000013210) #23	ENSNBRG00000013197 #24	CPXM2 (ENSNBRG00000013173) #24	CHST15 (ENSNBRG00000013154) #25	oat (ENSNBRG00000013133) #26	lhpp (ENSNBRG00000013107) #28	fam53b (ENSNBRG00000013091) #29	hpdl (ENSNBRG00000013072)	ZRANB1 (ENSNBRG00000013030) #32	ENSNBRG00000012997	mmp21 (ENSNBRG00000012962) #36	uros (ENSNBRG00000012750) #37	bccip (ENSNBRG00000012591)	dhx32a (ENSNBRG00000012459)	ADAM12 (ENSNBRG00000012394)
Midas cichlid	MODERN SPECIES	518	chst3b (ENSACIG00000024526)	ENSACIG00000024527	GHITM (ENSACIG00000024528)	CDHR1 (ENSACIG00000024529)	LRIT2 (ENSACIG00000000185)	lrit1b (ENSACIG00000000211)	rgrb (ENSACIG00000000234)	slc18a3b (ENSACIG00000000258)	CHAT (ENSACIG00000000278)	ENSACIG00000000346	zgc:174164 (ENSACIG00000000458)	ENSACIG00000000682 #17	ACADSB (ENSACIG00000000707) #19	IKZF5 (ENSACIG00000000747) #18	HMX3 (ENSACIG00000000760) #20	bub3 (ENSACIG00000000792) #22	GPR26 (ENSACIG00000000816) #23	CPXM2 (ENSACIG00000000845) #24	CHST15 (ENSACIG00000000886) #25	oat (ENSACIG00000000939) #26	lhpp (ENSACIG00000000967) #28	fam53b (ENSACIG00000000993) #29	hpdl (ENSACIG00000001011)	ENSACIG00000001077	ENSACIG00000001102	ENSACIG00000001148	mmp21 (ENSACIG00000001160) #36	uros (ENSACIG00000001192) #37	bccip (ENSACIG00000001411)	dhx32a (ENSACIG00000001436)	ADAM12 (ENSACIG00000001512)
Pomacentridae	ANCESTRAL SPECIES	13	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000154974
Pomacentridae_A	ANCESTRAL SPECIES	11	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000171352	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a
Amphiprion	ANCESTRAL SPECIES	78	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000171352	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000154974
Clown anemonefish	MODERN SPECIES	2145	CADM1 (ENSAOCG00000017315)	chst3b (ENSAOCG00000017299)	GHITM (ENSAOCG00000017290)	CDHR1 (ENSAOCG00000017267)	LRIT2 (ENSAOCG00000017178)	lrit1b (ENSAOCG00000017149)	rgrb (ENSAOCG00000017134)	slc18a3b (ENSAOCG00000017106)	CHAT (ENSAOCG00000017080)	ENSAOCG00000001917	zgc:174164 (ENSAOCG00000016879)	PSTK (ENSAOCG00000016851) #17	IKZF5 (ENSAOCG00000016841) #18	ACADSB (ENSAOCG00000016822) #19	HMX3 (ENSAOCG00000016814) #20	bub3 (ENSAOCG00000016783) #22	GPR26 (ENSAOCG00000016774) #23
Orange clownfish	MODERN SPECIES	10	pax2b (ENSAPEG00000020067)	chst3b (ENSAPEG00000020096)	GHITM (ENSAPEG00000020099)	CDHR1 (ENSAPEG00000020116)	LRIT2 (ENSAPEG00000020135)	lrit1b (ENSAPEG00000020146)	rgrb (ENSAPEG00000020167)	slc18a3b (ENSAPEG00000020196)	CHAT (ENSAPEG00000020225)	ENSAPEG00000020279	zgc:174164 (ENSAPEG00000020295)	IKZF5 (ENSAPEG00000020319) #18	PSTK (ENSAPEG00000020330) #17	ACADSB (ENSAPEG00000020355) #19	HMX3 (ENSAPEG00000020373) #20	bub3 (ENSAPEG00000020387) #22	GPR26 (ENSAPEG00000020399) #23	ENSAPEG00000020415 #24	CPXM2 (ENSAPEG00000020437) #24	CHST15 (ENSAPEG00000020468) #25	oat (ENSAPEG00000020494) #26	lhpp (ENSAPEG00000020518) #28	fam53b (ENSAPEG00000020547) #29	hpdl (ENSAPEG00000020554)	ZRANB1 (ENSAPEG00000020565) #32	ENSAPEG00000020611	mmp21 (ENSAPEG00000020650) #36	bccip (ENSAPEG00000020684)	dhx32a (ENSAPEG00000020721)	ADAM12 (ENSAPEG00000020789)	dock1 (ENSAPEG00000021059)
Spiny chromis	MODERN SPECIES	95	pax2b (ENSAPOG00000018555)	chst3b (ENSAPOG00000018567)	GHITM (ENSAPOG00000018575)	CDHR1 (ENSAPOG00000018741)	LRIT2 (ENSAPOG00000018764)	lrit1b (ENSAPOG00000018811)	rgrb (ENSAPOG00000018847)	slc18a3b (ENSAPOG00000018855)	CHAT (ENSAPOG00000000695)	PARG (ENSAPOG00000018989)	zgc:174164 (ENSAPOG00000019065)	PSTK (ENSAPOG00000019096) #17	IKZF5 (ENSAPOG00000019107) #18	ACADSB (ENSAPOG00000019119) #19	HMX3 (ENSAPOG00000019126) #20	bub3 (ENSAPOG00000019139) #22	GPR26 (ENSAPOG00000019158) #23	CPXM2 (ENSAPOG00000019170) #24	CHST15 (ENSAPOG00000019217) #25
Bicolor damselfish	MODERN SPECIES	907										ENSSPAG00000015184	zgc:174164 (ENSSPAG00000015317)	PSTK (ENSSPAG00000015344) #17	IKZF5 (ENSSPAG00000015358) #18	ACADSB (ENSSPAG00000015368) #19	HMX3 (ENSSPAG00000015387) #20	bub3 (ENSSPAG00000015401) #22	GPR26 (ENSSPAG00000015418) #23	CPXM2 (ENSSPAG00000015425) #24	CHST15 (ENSSPAG00000015474) #25	oat (ENSSPAG00000015499) #26	lhpp (ENSSPAG00000015531) #28	fam53b (ENSSPAG00000015559) #29	hpdl (ENSSPAG00000015569)	ZRANB1 (ENSSPAG00000015578) #32
Percomorphaceae_C	ANCESTRAL SPECIES	14	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000181498	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000171352	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g
Percomorphaceae_D	ANCESTRAL SPECIES	13	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000181498	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a
Carangaria	ANCESTRAL SPECIES	13	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000181498	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000153123.C.b
Carangaria_A	ANCESTRAL SPECIES	5	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000181498	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000153123.C.b
Seriola	ANCESTRAL SPECIES	1	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000171352	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g
Greater amberjack	MODERN SPECIES	27	pax2b (ENSSDUG00000019284)	chst3b (ENSSDUG00000019271)	GHITM (ENSSDUG00000019264)	CDHR1 (ENSSDUG00000019179)	LRIT2 (ENSSDUG00000019153)	lrit1b (ENSSDUG00000019135)	rgrb (ENSSDUG00000019107)	slc18a3b (ENSSDUG00000019092)	CHAT (ENSSDUG00000019052)	PARG (ENSSDUG00000019020)	zgc:174164 (ENSSDUG00000018959)	PSTK (ENSSDUG00000018928) #17	IKZF5 (ENSSDUG00000018916) #18	ACADSB (ENSSDUG00000018869) #19	HMX3 (ENSSDUG00000018844) #20	bub3 (ENSSDUG00000018820) #22	GPR26 (ENSSDUG00000018800) #23	CPXM2 (ENSSDUG00000018754) #24	ENSSDUG00000018744	CHST15 (ENSSDUG00000018726) #25	oat (ENSSDUG00000018714) #26	lhpp (ENSSDUG00000018675) #28	fam53b (ENSSDUG00000018669) #29	hpdl (ENSSDUG00000018640)	ZRANB1 (ENSSDUG00000018599) #32	CTBP2 (ENSSDUG00000018565) #33	mmp21 (ENSSDUG00000018543) #36	uros (ENSSDUG00000017922) #37	bccip (ENSSDUG00000017827)	dhx32a (ENSSDUG00000017808)	ADAM12 (ENSSDUG00000017759)
Yellowtail amberjack	MODERN SPECIES	2915	pax2b (ENSSLDG00000024356)	chst3b (ENSSLDG00000024381)	GHITM (ENSSLDG00000024393)	CDHR1 (ENSSLDG00000024408)	LRIT2 (ENSSLDG00000024458)	lrit1b (ENSSLDG00000024464)	rgrb (ENSSLDG00000024471)	slc18a3b (ENSSLDG00000024487)	CHAT (ENSSLDG00000024498)	PARG (ENSSLDG00000024515)	zgc:174164 (ENSSLDG00000024535)	IKZF5 (ENSSLDG00000024563) #18	PSTK (ENSSLDG00000024559) #17	ACADSB (ENSSLDG00000024567) #19	HMX3 (ENSSLDG00000024585) #20	bub3 (ENSSLDG00000024588) #22	GPR26 (ENSSLDG00000024596) #23	CPXM2 (ENSSLDG00000024612) #24	CHST15 (ENSSLDG00000024623) #25	oat (ENSSLDG00000024637) #26	lhpp (ENSSLDG00000024652) #28	fam53b (ENSSLDG00000024670) #29	hpdl (ENSSLDG00000024675)	ZRANB1 (ENSSLDG00000024682) #32
Barramundi perch	MODERN SPECIES	135	chst3b (ENSLCAG00010021138)	GHITM (ENSLCAG00010021142)	ENSLCAG00010021148	CDHR1 (ENSLCAG00010021168)	LRIT2 (ENSLCAG00010021190)	lrit1b (ENSLCAG00010021192)	rgrb (ENSLCAG00010021194)	slc18a3b (ENSLCAG00010021199)	CHAT (ENSLCAG00010021205)	PARG (ENSLCAG00010021225)	zgc:174164 (ENSLCAG00010021234)	PSTK (ENSLCAG00010021245) #17	IKZF5 (ENSLCAG00010021248) #18	ACADSB (ENSLCAG00010021254) #19	HMX3 (ENSLCAG00010021265) #20	bub3 (ENSLCAG00010021269) #22	GPR26 (ENSLCAG00010021276) #23	CPXM2 (ENSLCAG00010021284) #24	CHST15 (ENSLCAG00010021329) #25	oat (ENSLCAG00010021333) #26	lhpp (ENSLCAG00010021338) #28	fam53b (ENSLCAG00010021342) #29	hpdl (ENSLCAG00010021343)	ZRANB1 (ENSLCAG00010021344) #32	CTBP2 (ENSLCAG00010021351) #33	mmp21 (ENSLCAG00010021360) #36	uros (ENSLCAG00010021365) #37	bccip (ENSLCAG00010021371)	dhx32a (ENSLCAG00010021376)	ADAM12 (ENSLCAG00010021398)	ENSLCAG00010021479
Pleuronectoidei	ANCESTRAL SPECIES	6	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000154974
Turbot	MODERN SPECIES	9	ENSSMAG00000002375	ENSSMAG00000002390	chst3b (ENSSMAG00000028515)	GHITM (ENSSMAG00000002453)	ENSSMAG00000002468	LRIT2 (ENSSMAG00000002516)	ENSSMAG00000002614	rgrb (ENSSMAG00000002538)	slc18a3b (ENSSMAG00000002540)	ENSSMAG00000002555	ENSSMAG00000002632	PSTK (ENSSMAG00000030355) #17	IKZF5 (ENSSMAG00000031271) #18	ACADSB (ENSSMAG00000002691) #19	HMX3 (ENSSMAG00000002716) #20	bub3 (ENSSMAG00000002740) #22	CPXM2 (ENSSMAG00000002756) #24	lhpp (ENSSMAG00000031510) #28	ENSSMAG00000002854 #25	oat (ENSSMAG00000002903) #26	fam53b (ENSSMAG00000002942) #29	hpdl (ENSSMAG00000002946)	ZRANB1 (ENSSMAG00000002965) #32	ENSSMAG00000002995 #33	MMP21 (ENSSMAG00000003080) #36	UROS (ENSSMAG00000003092) #37	bccip (ENSSMAG00000003119)	dhx32a (ENSSMAG00000003101)	ADAM12 (ENSSMAG00000003145)	dock1 (ENSSMAG00000003179)	INSYN2A (ENSSMAG00000003452)
Tongue sole	MODERN SPECIES	18	pax2b (ENSCSEG00000017351)	chst3b (ENSCSEG00000017373)	GHITM (ENSCSEG00000017385)	CDHR1 (ENSCSEG00000017405)	LRIT2 (ENSCSEG00000017415)	lrit1b (ENSCSEG00000017418)	rgrb (ENSCSEG00000017424)	slc18a3b (ENSCSEG00000017434)	CHAT (ENSCSEG00000017442)	ENSCSEG00000017472	zgc:174164 (ENSCSEG00000017493)	PSTK (ENSCSEG00000017508) #17	IKZF5 (ENSCSEG00000017519) #18	ACADSB (ENSCSEG00000017522) #19	HMX3 (ENSCSEG00000017529) #20	bub3 (ENSCSEG00000017545) #22	GPR26 (ENSCSEG00000017566) #23	CPXM2 (ENSCSEG00000017573) #24	lhpp (ENSCSEG00000017595) #28	CHST15 (ENSCSEG00000017609) #25	oat (ENSCSEG00000017615) #26	fam53b (ENSCSEG00000017632) #29	ENSCSEG00000017645	kif22 (ENSCSEG00000017655)	pagr1 (ENSCSEG00000017686)	tlcd3ba (ENSCSEG00000017689)	ENSCSEG00000017692	ENSCSEG00000017703	ENSCSEG00000017711	cabp5a (ENSCSEG00000017720)	nif3l1 (ENSCSEG00000017744)
Anabantaria	ANCESTRAL SPECIES	18	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000181498	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000153123.C.b
Zig-zag eel	MODERN SPECIES	10	ENSMAMG00000019289	chst3b (ENSMAMG00000024475)	GHITM (ENSMAMG00000025802)	CDHR1 (ENSMAMG00000019326)	LRIT2 (ENSMAMG00000019343)	lrit1b (ENSMAMG00000019368)	rgrb (ENSMAMG00000024848)	slc18a3b (ENSMAMG00000019391)	CHAT (ENSMAMG00000019396)	ENSMAMG00000019421	ENSMAMG00000019436	PSTK (ENSMAMG00000019459) #17	IKZF5 (ENSMAMG00000026442) #18	ACADSB (ENSMAMG00000019465) #19	HMX3 (ENSMAMG00000019482) #20	bub3 (ENSMAMG00000025134) #22	GPR26 (ENSMAMG00000019506) #23	CPXM2 (ENSMAMG00000019514) #24	CHST15 (ENSMAMG00000019524) #25	oat (ENSMAMG00000019541) #26	lhpp (ENSMAMG00000019553) #28	fam53b (ENSMAMG00000019574) #29	hpdl (ENSMAMG00000019595)	ZRANB1 (ENSMAMG00000019599) #32	ENSMAMG00000019641	MMP21 (ENSMAMG00000019689) #36	bccip (ENSMAMG00000020052)	dhx32a (ENSMAMG00000020062)	ADAM12 (ENSMAMG00000020105)	ENSMAMG00000020124	dock1 (ENSMAMG00000020132)
Anabantoidei	ANCESTRAL SPECIES	10	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000181498	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000153123.C.b
Climbing perch	MODERN SPECIES	10	chst3b (ENSATEG00000027456)	GHITM (ENSATEG00000000327)	ENSATEG00000000296	CDHR1 (ENSATEG00000000330)	LRIT2 (ENSATEG00000000498)	lrit1b (ENSATEG00000000513)	rgrb (ENSATEG00000000531)	slc18a3b (ENSATEG00000000537)	CHAT (ENSATEG00000000558)	ENSATEG00000000627	ENSATEG00000000637	PSTK (ENSATEG00000027064) #17	IKZF5 (ENSATEG00000028196) #18	ACADSB (ENSATEG00000000683) #19	HMX3 (ENSATEG00000000741) #20	bub3 (ENSATEG00000000783) #22	GPR26 (ENSATEG00000025359) #23	CPXM2 (ENSATEG00000000844) #24	CHST15 (ENSATEG00000000910) #25	oat (ENSATEG00000000951) #26	lhpp (ENSATEG00000000989) #28	fam53b (ENSATEG00000001019) #29	hpdl (ENSATEG00000001026)	ZRANB1 (ENSATEG00000001032) #32	ENSATEG00000001093	MMP21 (ENSATEG00000001154) #36	uros (ENSATEG00000001194) #37	bccip (ENSATEG00000001234)	dhx32a (ENSATEG00000001267)	ADAM12 (ENSATEG00000001358)	ENSATEG00000001467
Siamese fighting fish	MODERN SPECIES	9	fbxl15 (ENSBSLG00000023648)	pax2b (ENSBSLG00000023659)	chst3b (ENSBSLG00000023686)	GHITM (ENSBSLG00000023688)	CDHR1 (ENSBSLG00000023706)	LRIT2 (ENSBSLG00000023917)	lrit1b (ENSBSLG00000023922)	rgrb (ENSBSLG00000023931)	slc18a3b (ENSBSLG00000023942)	CHAT (ENSBSLG00000023959)	ENSBSLG00000024078	zgc:174164 (ENSBSLG00000024447)	IKZF5 (ENSBSLG00000024722) #18	ACADSB (ENSBSLG00000024743) #19	HMX3 (ENSBSLG00000024802) #20	bub3 (ENSBSLG00000024804) #22	GPR26 (ENSBSLG00000024825) #23	CPXM2 (ENSBSLG00000024852) #24	CHST15 (ENSBSLG00000025383) #25	oat (ENSBSLG00000025455) #26	lhpp (ENSBSLG00000025575) #28	fam53b (ENSBSLG00000025581) #29	hpdl (ENSBSLG00000025585)	ZRANB1 (ENSBSLG00000025586) #32	ENSBSLG00000025603	mmp21 (ENSBSLG00000025712) #36	uros (ENSBSLG00000025733) #37	bccip (ENSBSLG00000025752)	dhx32a (ENSBSLG00000025763)	ADAM12 (ENSBSLG00000025799)	ENSBSLG00000025943
Eupercaria	ANCESTRAL SPECIES	10	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000181498	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a
Tetraodontidae	ANCESTRAL SPECIES	68								ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00530000063787.B.d.a
Fugu	MODERN SPECIES		pax2b (ENSTRUG00000011987)	chst3b (ENSTRUG00000022669)	rgrb (ENSTRUG00000011877)	LRIT1 (ENSTRUG00000011838)	LRIT2 (ENSTRUG00000011830)	CDHR1 (ENSTRUG00000011689)	GHITM (ENSTRUG00000011606)	SLC18A3 (ENSTRUG00000011581)	CHAT (ENSTRUG00000011392)	ENSTRUG00000011370	zgc:174164 (ENSTRUG00000010809)	PSTK (ENSTRUG00000023121) #17	IKZF5 (ENSTRUG00000025903) #18	ACADSB (ENSTRUG00000010600) #19	HMX3 (ENSTRUG00000010564) #20	bub3 (ENSTRUG00000010515) #22	GPR26 (ENSTRUG00000010483) #23	CPXM2 (ENSTRUG00000010158) #24	CHST15 (ENSTRUG00000010119) #25	oat (ENSTRUG00000009971) #26	lhpp (ENSTRUG00000009963) #28	fam53b (ENSTRUG00000009901) #29	hpdl (ENSTRUG00000023471)	ZRANB1 (ENSTRUG00000009736) #32	CTBP2 (ENSTRUG00000009444) #33	mmp21 (ENSTRUG00000009330) #36	uros (ENSTRUG00000009173) #37	bccip (ENSTRUG00000009085)	dhx32a (ENSTRUG00000008780)	ADAM12 (ENSTRUG00000008494)	INSYN2A (ENSTRUG00000008477)
Tetraodon	MODERN SPECIES	17	scd (ENSTNIG00000019395)	SEC31B (ENSTNIG00000019396)	ndufb8 (ENSTNIG00000019397)	gpx9 (ENSTNIG00000019398)	fbxl15 (ENSTNIG00000019399)	ENSTNIG00000019400	rgrb (ENSTNIG00000019401)	LRIT1 (ENSTNIG00000019402)	LRIT2 (ENSTNIG00000019403)	CDHR1 (ENSTNIG00000019404)	GHITM (ENSTNIG00000019405)	SLC18A3 (ENSTNIG00000019406)	CHAT (ENSTNIG00000019407)	PARG (ENSTNIG00000019408)	zgc:174164 (ENSTNIG00000019409)	bub3 (ENSTNIG00000019410) #22	CPXM2 (ENSTNIG00000019411) #24	CHST15 (ENSTNIG00000019412) #25	oat (ENSTNIG00000019413) #26	ENSTNIG00000019414 #28	fam53b (ENSTNIG00000019415) #29	ENSTNIG00000019416	ENSTNIG00000019417	ZRANB1 (ENSTNIG00000019418) #32	CTBP2 (ENSTNIG00000019419) #33	mmp21 (ENSTNIG00000010366) #36	bccip (ENSTNIG00000010367)	dhx32a (ENSTNIG00000010368)	ADAM12 (ENSTNIG00000010369)	dock1 (ENSTNIG00000010370)	ENSTNIG00000010371
Eupecaria_A	ANCESTRAL SPECIES	22	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000181498	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a
Ballan wrasse	MODERN SPECIES	349	ENSLBEG00000016945	ppa1a (ENSLBEG00000016977)	lrrc20 (ENSLBEG00000017005)	ndr2 (ENSLBEG00000017017)	pald1a (ENSLBEG00000017044)	ADAMTS14 (ENSLBEG00000017085)	ENSLBEG00000017132	TBATA (ENSLBEG00000017166)	QRFPR (ENSLBEG00000017188)	polr3a (ENSLBEG00000017214)	ZMIZ1 (ENSLBEG00000017313)	PSTK (ENSLBEG00000017378) #17	IKZF5 (ENSLBEG00000017395) #18	ACADSB (ENSLBEG00000017423) #19	HMX3 (ENSLBEG00000017463) #20	bub3 (ENSLBEG00000017492) #22	GPR26 (ENSLBEG00000017517) #23	CPXM2 (ENSLBEG00000017531) #24
Eupecaria_B	ANCESTRAL SPECIES	22	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000181498	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a
Perciformes	ANCESTRAL SPECIES	9	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a
Cottioidei	ANCESTRAL SPECIES	12	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00730000113876
Lumpfish	MODERN SPECIES	10	pax2b (ENSCLMG00005013406)	chst3b (ENSCLMG00005013411)	GHITM (ENSCLMG00005013412)	CDHR1 (ENSCLMG00005013413)	LRIT2 (ENSCLMG00005013420)	lrit1b (ENSCLMG00005013421)	rgrb (ENSCLMG00005013423)	slc18a3b (ENSCLMG00005013424)	CHAT (ENSCLMG00005013425)	ENSCLMG00005013591	zgc:174164 (ENSCLMG00005006021)	PSTK (ENSCLMG00005006224) #17	IKZF5 (ENSCLMG00005006226) #18	ACADSB (ENSCLMG00005006233) #19	HMX3 (ENSCLMG00005006313) #20	bub3 (ENSCLMG00005006318) #22	GPR26 (ENSCLMG00005006323) #23	CPXM2 (ENSCLMG00005006326) #24	CHST15 (ENSCLMG00005006329) #25	oat (ENSCLMG00005006337) #26	lhpp (ENSCLMG00005006984) #28	fam53b (ENSCLMG00005006985) #29	hpdl (ENSCLMG00005006987)	ZRANB1 (ENSCLMG00005006988) #32	ENSCLMG00005006989	mmp21 (ENSCLMG00005006992) #36	uros (ENSCLMG00005006994) #37	bccip (ENSCLMG00005007003)	dhx32a (ENSCLMG00005007005)	ADAM12 (ENSCLMG00005007034)	dock1 (ENSCLMG00005007103)
Stickleback	MODERN SPECIES	5	pax2b (ENSGACG00000002432)	chst3b (ENSGACG00000002438)	GHITM (ENSGACG00000002440)	CDHR1 (ENSGACG00000002462)	LRIT2 (ENSGACG00000002463)	lrit1b (ENSGACG00000002464)	rgrb (ENSGACG00000002465)	slc18a3b (ENSGACG00000002480)	CHAT (ENSGACG00000002482)	PARG (ENSGACG00000002486)	zgc:174164 (ENSGACG00000002492)	ENSGACG00000002499	IKZF5 (ENSGACG00000002500) #18	ACADSB (ENSGACG00000002502) #19	HMX3 (ENSGACG00000002521) #20	bub3 (ENSGACG00000002522) #22	GPR26 (ENSGACG00000002532) #23	CPXM2 (ENSGACG00000002535) #24	CHST15 (ENSGACG00000002542) #25	oat (ENSGACG00000002546) #26	lhpp (ENSGACG00000002578) #28	fam53b (ENSGACG00000002593) #29	hpdl (ENSGACG00000002596)	ZRANB1 (ENSGACG00000002597) #32	CTBP2 (ENSGACG00000002600) #33	mmp21 (ENSGACG00000002602) #36	uros (ENSGACG00000002608) #37	bccip (ENSGACG00000002614)	dhx32a (ENSGACG00000002621)	ADAM12 (ENSGACG00000002628)	ENSGACG00000002637
Perciformes_a	ANCESTRAL SPECIES	8	ENSGT00940000157412.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000153123.C.b
Channel bull blenny	MODERN SPECIES	10	pax2b (ENSCGOG00000020120)	chst3b (ENSCGOG00000020109)	GHITM (ENSCGOG00000020046)	CDHR1 (ENSCGOG00000019906)	LRIT2 (ENSCGOG00000019902)	lrit1b (ENSCGOG00000019901)	rgrb (ENSCGOG00000019896)	slc18a3b (ENSCGOG00000019894)	CHAT (ENSCGOG00000019798)	ENSCGOG00000019515	zgc:174164 (ENSCGOG00000019488)	PSTK (ENSCGOG00000019484) #17	IKZF5 (ENSCGOG00000019486) #18	ACADSB (ENSCGOG00000019260) #19	HMX3 (ENSCGOG00000019253) #20	bub3 (ENSCGOG00000019236) #22	GPR26 (ENSCGOG00000019232) #23	CPXM2 (ENSCGOG00000018896) #24	CHST15 (ENSCGOG00000018891) #25	oat (ENSCGOG00000018784) #26	lhpp (ENSCGOG00000018768) #28	fam53b (ENSCGOG00000018762) #29	hpdl (ENSCGOG00000018757)	ZRANB1 (ENSCGOG00000018728) #32	ENSCGOG00000018617	mmp21 (ENSCGOG00000018613) #36	uros (ENSCGOG00000018598) #37	bccip (ENSCGOG00000018594)	dhx32a (ENSCGOG00000018590)	ADAM12 (ENSCGOG00000018303)	ENSCGOG00000018297
Pike perch	MODERN SPECIES	3	pax2b (ENSSLUG00000005014)	chst3b (ENSSLUG00000004994)	GHITM (ENSSLUG00000004981)	CDHR1 (ENSSLUG00000004627)	LRIT2 (ENSSLUG00000004583)	lrit1b (ENSSLUG00000004569)	rgrb (ENSSLUG00000004557)	slc18a3b (ENSSLUG00000004554)	CHAT (ENSSLUG00000004451)	ENSSLUG00000004280	zgc:174164 (ENSSLUG00000004208)	PSTK (ENSSLUG00000004186) #17	IKZF5 (ENSSLUG00000004179) #18	ACADSB (ENSSLUG00000004106) #19	HMX3 (ENSSLUG00000004095) #20	bub3 (ENSSLUG00000004077) #22	GPR26 (ENSSLUG00000004053) #23	ENSSLUG00000004040 #24	CPXM2 (ENSSLUG00000004028) #24	CHST15 (ENSSLUG00000004013) #25	oat (ENSSLUG00000003683) #26	lhpp (ENSSLUG00000003628) #28	fam53b (ENSSLUG00000003620) #29	hpdl (ENSSLUG00000003609)	ZRANB1 (ENSSLUG00000003538) #32	ENSSLUG00000003386	mmp21 (ENSSLUG00000003312) #36	uros (ENSSLUG00000024636) #37	bccip (ENSSLUG00000024625)	dhx32a (ENSSLUG00000024622)	ADAM12 (ENSSLUG00000024431)
Eupecaria_C	ANCESTRAL SPECIES	23	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000181498	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000153123.C.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	33	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000181498	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000153123.C.b
European seabass	MODERN SPECIES	11	ENSDLAG00005022916	chst3b (ENSDLAG00005022980)	GHITM (ENSDLAG00005022983)	ENSDLAG00005022985	CDHR1 (ENSDLAG00005022996)	LRIT2 (ENSDLAG00005023278)	lrit1b (ENSDLAG00005023279)	rgrb (ENSDLAG00005023284)	SLC18A3 (ENSDLAG00005034152)	ENSDLAG00005023291	ENSDLAG00005023405	ENSDLAG00005023453	PSTK (ENSDLAG00005004314) #17	ENSDLAG00005004331 #18	ACADSB (ENSDLAG00005004391) #19	bub3 (ENSDLAG00005004871) #22	GPR26 (ENSDLAG00005033829) #23	CPXM2 (ENSDLAG00005004973) #24	CHST15 (ENSDLAG00005005877) #25	oat (ENSDLAG00005005905) #26	lhpp (ENSDLAG00005033392) #28	fam53b (ENSDLAG00005006019) #29	ZRANB1 (ENSDLAG00005006048) #32	hpdl (ENSDLAG00005006032)	ENSDLAG00005006098	MMP21 (ENSDLAG00005027490) #36	bccip (ENSDLAG00005031346)	dhx32a (ENSDLAG00005006732)	ADAM12 (ENSDLAG00005006783)	dock1 (ENSDLAG00005007276)	FAM196A (ENSDLAG00005015347)
Large yellow croaker	MODERN SPECIES	488	pax2b (ENSLCRG00005004568)	chst3b (ENSLCRG00005004565)	GHITM (ENSLCRG00005004557)	CDHR1 (ENSLCRG00005003395)	LRIT2 (ENSLCRG00005003385)	lrit1b (ENSLCRG00005003382)	rgrb (ENSLCRG00005003378)	slc18a3b (ENSLCRG00005003376)	CHAT (ENSLCRG00005003302)	ENSLCRG00005003210	zgc:174164 (ENSLCRG00005003184)	PSTK (ENSLCRG00005003176) #17	IKZF5 (ENSLCRG00005003174) #18	ACADSB (ENSLCRG00005003147) #19	HMX3 (ENSLCRG00005003143) #20	bub3 (ENSLCRG00005003139) #22	GPR26 (ENSLCRG00005003134) #23	CPXM2 (ENSLCRG00005001384) #24	CHST15 (ENSLCRG00005001374) #25	oat (ENSLCRG00005000873) #26	lhpp (ENSLCRG00005000794) #28	fam53b (ENSLCRG00005022614) #29	hpdl (ENSLCRG00005022613)	ZRANB1 (ENSLCRG00005022611) #32	ENSLCRG00005022537	mmp21 (ENSLCRG00005022531) #36	uros (ENSLCRG00005022530) #37	bccip (ENSLCRG00005022527)	dhx32a (ENSLCRG00005022524)	ADAM12 (ENSLCRG00005022455)	ENSLCRG00005022452
Gilthead seabream	MODERN SPECIES	12	fbxl15 (ENSSAUG00010023066)	pax2b (ENSSAUG00010023067)	chst3b (ENSSAUG00010023075)	CDHR1 (ENSSAUG00010023084)	LRIT2 (ENSSAUG00010023309)	lrit1b (ENSSAUG00010023310)	rgrb (ENSSAUG00010023311)	slc18a3b (ENSSAUG00010023312)	CHAT (ENSSAUG00010023314)	ENSSAUG00010023317	zgc:174164 (ENSSAUG00010023329)	PSTK (ENSSAUG00010023335) #17	IKZF5 (ENSSAUG00010023337) #18	ACADSB (ENSSAUG00010023340) #19	HMX3 (ENSSAUG00010023349) #20	bub3 (ENSSAUG00010023350) #22	GPR26 (ENSSAUG00010023351) #23	CPXM2 (ENSSAUG00010023369) #24	CHST15 (ENSSAUG00010023814) #25	oat (ENSSAUG00010023818) #26	lhpp (ENSSAUG00010023824) #28	fam53b (ENSSAUG00010023826) #29	hpdl (ENSSAUG00010023827)	ZRANB1 (ENSSAUG00010023828) #32	ENSSAUG00010023830	mmp21 (ENSSAUG00010023865) #36	uros (ENSSAUG00010023867) #37	bccip (ENSSAUG00010023874)	dhx32a (ENSSAUG00010023877)	ADAM12 (ENSSAUG00010023879)	ENSSAUG00010024056
Protacanthopterygii	ANCESTRAL SPECIES	9											ENSGT00940000166115	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000160878.f	ENSGT00940000155495.C.a.a
Salmoninae	ANCESTRAL SPECIES	142										ENSGT00940000166115.h	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00940000160392.d #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002.a #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000153123.C.b
Salmoninae_a	ANCESTRAL SPECIES	100										ENSGT00940000166115.h	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00940000160392.d #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002.a #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a	ENSGT00940000153123.C.b
Oncorhynchus	ANCESTRAL SPECIES	79										ENSGT00940000166115.g.a.a	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00940000160392.d #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002.a #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.c.a #33	ENSGT00940000159140.d.h #36	ENSGT00390000009853.z #37	ENSGT00390000009853.y.a #37	ENSGT00390000000696	ENSGT00940000157227.g	ENSGT00940000155495.C.a.a
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	249									ENSOMYG00000074854	ENSOMYG00000072553	PSTK (ENSOMYG00000063805) #17	IKZF5 (ENSOMYG00000001060) #18	ACADSB (ENSOMYG00000071031) #19	HMX3 (ENSOMYG00000069374) #20	HMX2 (ENSOMYG00000069483) #21	bub3 (ENSOMYG00000055038) #22
Rainbow trout	MODERN SPECIES		FMN2 (ENSOMYG00000056470)	CHRM3 (ENSOMYG00000031062)	ENSOMYG00000052284	mtr (ENSOMYG00000070737)	ENSOMYG00000051567	ENSOMYG00000051216	ENSOMYG00000051804	ENSOMYG00000060316	ENSOMYG00000077826	ENSOMYG00000058098	ENSOMYG00000001087 #17	IKZF5 (ENSOMYG00000077434) #18	ENSOMYG00000059877 #19	HMX3 (ENSOMYG00000055890) #20	HMX2 (ENSOMYG00000025022) #21	bub3 (ENSOMYG00000069949) #22	ENSOMYG00000077443 #36	UROS (ENSOMYG00000022570) #37	bccip (ENSOMYG00000022621)	dhx32a (ENSOMYG00000048987)	ENSOMYG00000030733	ENSOMYG00000069654	ADAM12 (ENSOMYG00000071065)	ENSOMYG00000052817	ENSOMYG00000053731	INSYN2A (ENSOMYG00000060805)	dock1 (ENSOMYG00000070523)	foxi1 (ENSOMYG00000038368)	CLRN3 (ENSOMYG00000000959)	ENSOMYG00000055563	ENSOMYG00000066994
Oncorhynchus_a	ANCESTRAL SPECIES	217										ENSGT00940000166115.g.a.a	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00940000160392.d #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26
Coho salmon	DUPLICATION
Coho salmon	MODERN SPECIES	33	RGS7 (ENSOKIG00005033689)	grem2b (ENSOKIG00005033680)	ENSOKIG00005049012	FMN2 (ENSOKIG00005049005)	ENSOKIG00005049001	CHRM3 (ENSOKIG00005048997)	ENSOKIG00005048989	ENSOKIG00005048957	ENSOKIG00005048946	PSTK (ENSOKIG00005048944) #17	IKZF5 (ENSOKIG00005048941) #18	ACADSB (ENSOKIG00005048931) #19	ENSOKIG00005048922	HMX3 (ENSOKIG00005048918) #20	HMX2 (ENSOKIG00005048914) #21	bub3 (ENSOKIG00005048894) #22	GPR26 (ENSOKIG00005048878) #23	ENSOKIG00005048868	ENSOKIG00005048865	CPXM2 (ENSOKIG00005048676) #24	CHST15 (ENSOKIG00005048643) #25	oat (ENSOKIG00005048618) #26	ENSOKIG00005048614	ENSOKIG00005048613	ENSOKIG00005048609	ENSOKIG00005048608	dock1 (ENSOKIG00005048213)	foxi1 (ENSOKIG00005048153)	CLRN3 (ENSOKIG00005048151)	PTPRE (ENSOKIG00005047066)	ebf3a (ENSOKIG00005046976)
Coho salmon	MODERN SPECIES	1335										zgc:174164 (ENSOKIG00005043282)	PSTK (ENSOKIG00005043269) #17	IKZF5 (ENSOKIG00005043256) #18	ACADSB (ENSOKIG00005043216) #19	HMX3 (ENSOKIG00005043203) #20	HMX2 (ENSOKIG00005043199) #21	bub3 (ENSOKIG00005043145) #22	ENSOKIG00005043135	GPR26 (ENSOKIG00005043075) #23	ENSOKIG00005043065	CPXM2 (ENSOKIG00005042322) #24	CHST15 (ENSOKIG00005042243) #25
Chinook salmon	MODERN SPECIES	1454																bub3 (ENSOTSG00005019529) #22
Salmo	DUPLICATION
Salmo	ANCESTRAL SPECIES	134	ENSGT01030000235112	ENSGT00940000160084.h.b	ENSGT00940000154906.C.d.w.b	ENSGT00420000029824.g	ENSGT00940000153968.b.c.a	ENSGT01030000234635.a.a.a.b.e	ENSGT00420000029824.h	ENSGT00940000166115.h	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00940000160392.d #21	ENSGT00950000183091.A.a.z #22	ENSGT00950000183001.a.a.c #23	ENSGT00950000183091.A.a.y #22	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895.e #26	ENSGT00940000159002.a.b #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a.e #32	ENSGT00940000154430.c.a #33	ENSGT00940000158045.a.f #32	ENSGT00940000159140.d #36	ENSGT00390000009853.w #37
Atlantic salmon	MODERN SPECIES		ENSSSAG00000040023	ENSSSAG00000121509	ENSSSAG00000117214	ENSSSAG00000093603	ENSSSAG00000094559	mtr (ENSSSAG00000088743)	ENSSSAG00000107457	ENSSSAG00000113300	ENSSSAG00000105738	ENSSSAG00000087513	PSTK (ENSSSAG00000068978) #17	IKZF5 (ENSSSAG00000068982) #18	ACADSB (ENSSSAG00000068986) #19	HMX3 (ENSSSAG00000069042) #20	HMX2 (ENSSSAG00000104322) #21	bub3 (ENSSSAG00000115825) #22	ENSSSAG00000104504	ENSSSAG00000114544	ENSSSAG00000088336	ENSSSAG00000089060	ENSSSAG00000121150	CHST15 (ENSSSAG00000001170) #25	ENSSSAG00000010431	ENSSSAG00000111788	oat (ENSSSAG00000000881) #26	lhpp (ENSSSAG00000060938) #28	fa53b (ENSSSAG00000000510) #29	ENSSSAG00000000526	ENSSSAG00000089407	ENSSSAG00000094710	ENSSSAG00000093828 #32
River trout	MODERN SPECIES	590	ENSSTUG00000033958	ENSSTUG00000034023	mtr (ENSSTUG00000034844)	ENSSTUG00000034872	mtr (ENSSTUG00000034942)	ENSSTUG00000036700	ENSSTUG00000036709	SYDE1 (ENSSTUG00000036742)	zgc:174164 (ENSSTUG00000036794)	PSTK (ENSSTUG00000036874) #17	IKZF5 (ENSSTUG00000036882) #18	ACADSB (ENSSTUG00000036888) #19	ENSSTUG00000036914	HMX3 (ENSSTUG00000036918) #20	HMX2 (ENSSTUG00000036925) #21	bub3 (ENSSTUG00000036930) #22	ENSSTUG00000036965	zgc:174164 (ENSSTUG00000036981)	PSTK (ENSSTUG00000037104) #17	IKZF5 (ENSSTUG00000037122) #18	ACADSB (ENSSTUG00000037153) #19	ENSSTUG00000037211	HMX3 (ENSSTUG00000037214) #20	HMX2 (ENSSTUG00000037228) #21	bub3 (ENSSTUG00000037235) #22	GPR26 (ENSSTUG00000037302) #23	CPXM2 (ENSSTUG00000037346) #24	ENSSTUG00000037622 #24	GPR26 (ENSSTUG00000038020) #23	ENSSTUG00000038057	CHST15 (ENSSTUG00000038062) #25
Salmo	ANCESTRAL SPECIES	134			ENSGT01030000235112	ENSGT00940000160084.h.b	ENSGT00940000154906.C.d.w.b	ENSGT00420000029824.g	ENSGT00940000153968.b.c.a	ENSGT01030000234635.a.a.a.b.e	ENSGT00420000029824.h	ENSGT00940000166115.h	ENSGT00390000017554 #17	ENSGT00940000155035.n.b #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00940000160392.d #21	ENSGT00950000183091.A.a.z #22	ENSGT00950000183001.a.a.c #23	ENSGT00950000183091.A.a.y #22	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895.e #26	ENSGT00940000159002.a.b #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a.e #32	ENSGT00940000154430.c.a #33	ENSGT00940000158045.a.f #32	ENSGT00940000159140.d #36	ENSGT00390000009853.w #37
Atlantic salmon	MODERN SPECIES	9	ENSSSAG00000101061	ENSSSAG00000102140	ENSSSAG00000011817	ENSSSAG00000083154	ENSSSAG00000084605	ENSSSAG00000100171	ENSSSAG00000104679	ENSSSAG00000111551	ENSSSAG00000083976	ENSSSAG00000040087	PSTK (ENSSSAG00000040262) #17	IKZF5 (ENSSSAG00000098119) #18	ACADSB (ENSSSAG00000039884) #19	HMX3 (ENSSSAG00000103220) #20	HMX2 (ENSSSAG00000069043) #21	bub3 (ENSSSAG00000039728) #22	GPR26 (ENSSSAG00000068320) #23	CPXM2 (ENSSSAG00000044099) #24	CHST15 (ENSSSAG00000115827) #25	oat (ENSSSAG00000006861) #26	lhpp (ENSSSAG00000006753) #28	fam53b (ENSSSAG00000084921) #29	ENSSSAG00000111786	ENSSSAG00000104982	ZRANB1 (ENSSSAG00000113666) #32	ENSSSAG00000108166	CTBP2 (ENSSSAG00000114193) #33	ENSSSAG00000059118 #36	ENSSSAG00000084410	UROS (ENSSSAG00000015500) #37	bccip (ENSSSAG00000015607)
River trout	MODERN SPECIES	590	PSTK (ENSSTUG00000036874) #17	IKZF5 (ENSSTUG00000036882) #18	ACADSB (ENSSTUG00000036888) #19	ENSSTUG00000036914	HMX3 (ENSSTUG00000036918) #20	HMX2 (ENSSTUG00000036925) #21	bub3 (ENSSTUG00000036930) #22	ENSSTUG00000036965	zgc:174164 (ENSSTUG00000036981)	PSTK (ENSSTUG00000037104) #17	IKZF5 (ENSSTUG00000037122) #18	ACADSB (ENSSTUG00000037153) #19	ENSSTUG00000037211	HMX3 (ENSSTUG00000037214) #20	HMX2 (ENSSTUG00000037228) #21	bub3 (ENSSTUG00000037235) #22	GPR26 (ENSSTUG00000037302) #23	CPXM2 (ENSSTUG00000037346) #24	ENSSTUG00000037622 #24	GPR26 (ENSSTUG00000038020) #23	ENSSTUG00000038057	CHST15 (ENSSTUG00000038062) #25
Huchen	MODERN SPECIES	3634														HMX3 (ENSHHUG00000048456) #20	HMX2 (ENSHHUG00000048461) #21	bub3 (ENSHHUG00000048463) #22	ENSHHUG00000048468
Northern pike	MODERN SPECIES	5	FMN2 (ENSELUG00000016861)	CHRM3 (ENSELUG00000016733)	ENSELUG00000027566	ENSELUG00000016641	mtr (ENSELUG00000016443)	ENSELUG00000016255	ENSELUG00000015737	SYDE1 (ENSELUG00000015698)	zgc:174164 (ENSELUG00000032296)	zgc:174164 (ENSELUG00000015648)	pstk (ENSELUG00000015486) #17	IKZF5 (ENSELUG00000015447) #18	ACADSB (ENSELUG00000015403) #19	HMX3 (ENSELUG00000015386) #20	HMX2 (ENSELUG00000015370) #21	bub3 (ENSELUG00000015355) #22	ENSELUG00000015338	GPR26 (ENSELUG00000015333) #23	CPXM2 (ENSELUG00000000559) #24	CHST15 (ENSELUG00000015303) #25	oat (ENSELUG00000015274) #26	lhpp (ENSELUG00000015266) #28	fam53b (ENSELUG00000015234) #29	hpdl (ENSELUG00000015209)	ZRANB1 (ENSELUG00000015155) #32	CTBP2 (ENSELUG00000015118) #33	mmp21 (ENSELUG00000015094) #36	uros (ENSELUG00000015075) #37	bccip (ENSELUG00000015036)	ENSELUG00000015013	dhx32a (ENSELUG00000014983)
Otomorpha	ANCESTRAL SPECIES	37	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00390000017554 #17	ENSGT00940000155035.m #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00940000165331	ENSGT00940000155035.n.a #18	ENSGT00940000158286.e.a #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00730000114509	ENSGT00950000183001.a.a.d.a.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.d #33	ENSGT00940000168551	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37
Otophysi	ANCESTRAL SPECIES	154	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00390000017554 #17	ENSGT00940000155035.m #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00950000186100	ENSGT00390000015768.i.a	ENSGT00940000156955.a.a #9	ENSGT00940000155157.a #7	ENSGT00940000165331	ENSGT00940000155035.n.a #18	ENSGT00940000158286.e.a #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00730000114509	ENSGT00950000183001.a.a.d.a.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.d #33	ENSGT00940000168551	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT01050000244965.a.a
Characiphysae	ANCESTRAL SPECIES	149		ENSGT00600000085659.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000017554 #17	ENSGT00940000155035.m #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b.d #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00730000114509	ENSGT00950000183001.a.a.d.a.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.d #33	ENSGT00940000168551	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT01050000244965.a.a
Characiphysae_b	ANCESTRAL SPECIES	145	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000017554 #17	ENSGT00940000155035.m #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b.d #20	ENSGT00940000156955.a.a.e #9	ENSGT00940000155157.a #7	ENSGT00940000165331	ENSGT00940000155035.n.a #18	ENSGT00940000158286.e.a #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00730000114509	ENSGT00950000183001.a.a.d.a.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00940000154430.d #33	ENSGT00940000168551	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT01050000244965.a.a
Characoidei	ANCESTRAL SPECIES	171		ENSGT00600000085659.a.b	ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000159143.c	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000017554 #17	ENSGT00940000155035.m #18	ENSGT00940000156525 #19	ENSGT00940000158286.e.b.d #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00730000114509	ENSGT00950000183001.a.a.d.a.a.a #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000168551	ENSGT00940000166669.b	ENSGT00940000159140.d #36	ENSGT00390000009853 #37	ENSGT01050000244965.a.a	ENSGT01100000263529.a.a.a.a.a.a.a.b.b.a.b	ENSGT01030000234578.A.b.a.a.a.b
Red-bellied piranha	MODERN SPECIES	1008														HMX3 (ENSPNAG00000003571) #20	HMX2 (ENSPNAG00000019047) #21	bub3 (ENSPNAG00000019020) #22
Mexicana tetra	MODERN SPECIES	117	ENSAMXG00000044028	ENSAMXG00000004372	scd (ENSAMXG00000004360)	GHITM (ENSAMXG00000004354)	ENSAMXG00000004348	LRIT2 (ENSAMXG00000043613)	lrit1b (ENSAMXG00000029266)	rgrb (ENSAMXG00000004323)	slc18a3b (ENSAMXG00000025603)	CHAT (ENSAMXG00000004303)	PSTK (ENSAMXG00000004297) #17	ENSAMXG00000033540 #18	ACADSB (ENSAMXG00000034865) #19	HMX3 (ENSAMXG00000030895) #20	HMX2 (ENSAMXG00000035751) #21	bub3 (ENSAMXG00000004273) #22	ENSAMXG00000004262	GPR26 (ENSAMXG00000004253) #23	ENSAMXG00000004247 #24
Electric eel	MODERN SPECIES	641				ENSEEEG00000020266	chst3b (ENSEEEG00000020268)	GHITM (ENSEEEG00000020270)	CDHR1 (ENSEEEG00000020278)	lrit1b (ENSEEEG00000020285)	rgrb (ENSEEEG00000020290)	slc18a3b (ENSEEEG00000020294)	CHAT (ENSEEEG00000020297)	PSTK (ENSEEEG00000020305) #17	ENSEEEG00000020307 #18	ACADSB (ENSEEEG00000020313) #19	HMX3 (ENSEEEG00000020353) #20	bub3 (ENSEEEG00000020361) #22
Channel catfish	MODERN SPECIES	4	zgc:92749 (ENSIPUG00000002576)	UROS (ENSIPUG00000002557) #37	mmp21 (ENSIPUG00000002534) #36	ctbp2a (ENSIPUG00000002494) #33	zranb1 (ENSIPUG00000002479) #32	hpdl (ENSIPUG00000002460)	fam53b (ENSIPUG00000002445) #29	lhpp (ENSIPUG00000002423) #28	ENSIPUG00000002416	oat (ENSIPUG00000002393) #26	CHST15 (ENSIPUG00000002375) #25	cpxm2 (ENSIPUG00000002367) #24	gpr26 (ENSIPUG00000002346) #23	hmx3 (ENSIPUG00000002335) #20	hmx2 (ENSIPUG00000002329) #21	bub3 (ENSIPUG00000002319) #22	ENSIPUG00000002314	ENSIPUG00000002308	ENSIPUG00000002305	ENSIPUG00000002278	ENSIPUG00000002269	ENSIPUG00000002261	ENSIPUG00000002253	ENSIPUG00000002245	ENSIPUG00000002233	ACADSB (ENSIPUG00000002210) #19	ikzf5 (ENSIPUG00000002196) #18	ENSIPUG00000002201 #17	ENSIPUG00000002188	CHAT (ENSIPUG00000002156)	slc18a3b (ENSIPUG00000002152)
Cyprinoidei	ANCESTRAL SPECIES	161				ENSGT00940000161045.a	ENSGT01050000244940.a.b	ENSGT00940000155509.b.a	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a	ENSGT00390000017554 #17	ENSGT00940000156525.a #19	ENSGT00940000156525.b #19	ENSGT00940000158286.e.b #20	ENSGT00950000183091.A.a #22	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	532		ENSGT00940000161045.a	ENSGT01050000244940.a.b.qb	ENSGT01050000244940.a.b.pb	ENSGT00940000155509.b.a	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a.a.a	ENSGT00390000017554 #17	ENSGT00940000156525.b #19	ENSGT00940000158286.e.b.a #20	ENSGT00950000183091.A.a.ab #22	ENSGT00940000158286.e.b.b #20	ENSGT00950000183091.A.a.`b #22	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e.b #29
Cyprininae_a	DUPLICATION
Cyprininae_a	ANCESTRAL SPECIES	390						ENSGT00940000159449.c.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a.a.a	ENSGT00390000017554 #17	ENSGT00940000156525.b #19	ENSGT00940000158286.e.b.b #20	ENSGT00950000183091.A.a.`b.b #22	ENSGT00940000158286.e.b.a #20	ENSGT00950000183091.A.a.ab #22	ENSGT00940000156414 #24	ENSGT00950000183091.A.a.`b.a #22	ENSGT00390000004719.b #25	ENSGT00630000089895.g #26	ENSGT00530000063371.B.e.a #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00420000029824	ENSGT00940000160084.h.e	ENSGT00940000154289.B.e.b	ENSGT00940000154209.a.b.a	ENSGT00940000156661.b.b	ENSGT00950000183122.A.d.a	ENSGT00940000166815.b	ENSGT00940000167571.b
Common carp reference	MODERN SPECIES	25	ENSCCRG00000062616	dpysl4 (ENSCCRG00000052032)	ENSCCRG00000030503	bnip3 (ENSCCRG00000040039)	ppp2r2d (ENSCCRG00000082487)	TCERG1L (ENSCCRG00000067852)	ENSCCRG00000027544	glrx3 (ENSCCRG00000014693)	chst3b (ENSCCRG00000059035)	GHITM (ENSCCRG00000024786)	ENSCCRG00000077609	lrit1b (ENSCCRG00000063641)	rgrb (ENSCCRG00000038403)	slc18a3b (ENSCCRG00000030113)	ENSCCRG00000082073	BUB3 (ENSCCRG00000038464) #22	ENSCCRG00000048004 #20	CPXM2 (ENSCCRG00000031502) #24	oat (ENSCCRG00000054433) #26	LHPP (ENSCCRG00000053395) #28	fam53b (ENSCCRG00000067260) #29	ENSCCRG00000077413 #32	ENSCCRG00000048939	ENSCCRG00000075022	ENSCCRG00000045597	ENSCCRG00000071171	ENSCCRG00000049133	ENSCCRG00000078275	ENSCCRG00000045444	ENSCCRG00000014254	ENSCCRG00000011425
Golden-line barbel	MODERN SPECIES	2170										chst3b (ENSSGRG00000011343)	GHITM (ENSSGRG00000011347)	ENSSGRG00000011469	lrit1b (ENSSGRG00000011477)	rgrb (ENSSGRG00000011478)	ENSSGRG00000011480 #19	bub3 (ENSSGRG00000011483) #22
Cyprininae_a	ANCESTRAL SPECIES	390										ENSGT00940000159449.c.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a.a.a	ENSGT00390000017554 #17	ENSGT00940000156525.b #19	ENSGT00940000158286.e.b.b #20	ENSGT00950000183091.A.a.`b.b #22	ENSGT00940000158286.e.b.a #20	ENSGT00950000183091.A.a.ab #22	ENSGT00940000156414 #24	ENSGT00950000183091.A.a.`b.a #22	ENSGT00390000004719.b #25	ENSGT00630000089895.g #26	ENSGT00530000063371.B.e.a #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00420000029824	ENSGT00940000160084.h.e	ENSGT00940000154289.B.e.b	ENSGT00940000154209.a.b.a	ENSGT00940000156661.b.b	ENSGT00950000183122.A.d.a
Common carp reference	MODERN SPECIES	44	TCERG1L (ENSCCRG00000067068)	glrx3 (ENSCCRG00000027551)	ENSCCRG00000062912	ENSCCRG00000060238	GHITM (ENSCCRG00000031010)	ENSCCRG00000061263	lrit1b (ENSCCRG00000054080)	rgrb (ENSCCRG00000075528)	ENSCCRG00000076235	slc18a3b (ENSCCRG00000047015)	ENSCCRG00000054250	ENSCCRG00000038429	PSTK (ENSCCRG00000054711) #17	ACADSB (ENSCCRG00000069429) #19	HMX3 (ENSCCRG00000038459) #20	bub3 (ENSCCRG00000067917) #22	CPXM2 (ENSCCRG00000031509) #24	CHST15 (ENSCCRG00000079489) #25	ENSCCRG00000067094	oat (ENSCCRG00000079674) #26	ENSCCRG00000048646 #29	hpdl (ENSCCRG00000048652)	ENSCCRG00000081448 #32	mtr (ENSCCRG00000018980)	ENSCCRG00000073577	ENSCCRG00000037939	CHRM3 (ENSCCRG00000062872)	ENSCCRG00000028502	grem2b (ENSCCRG00000063882)	RGS7 (ENSCCRG00000042793)	fh (ENSCCRG00000069250)
Goldfish	MODERN SPECIES	30	ENSCARG00000039260	fh (ENSCARG00000039320)	RGS7 (ENSCARG00000006062)	grem2b (ENSCARG00000006287)	FMN2 (ENSCARG00000006297)	CHRM3 (ENSCARG00000006362)	GHITM (ENSCARG00000007988)	ENSCARG00000008065	lrit1b (ENSCARG00000009388)	rgrb (ENSCARG00000009398)	slc18a3b (ENSCARG00000009416)	CHAT (ENSCARG00000009442)	ENSCARG00000009534	ENSCARG00000009553 #17	HMX3 (ENSCARG00000009748) #20	bub3 (ENSCARG00000009755) #22	CHST15 (ENSCARG00000009767) #25	oat (ENSCARG00000009779) #26	fam53b (ENSCARG00000009792) #29	glrx3 (ENSCARG00000009799)	ENSCARG00000009817	ENSCARG00000009822	ENSCARG00000009827	CDH10 (ENSCARG00000009844)	CDH12 (ENSCARG00000009902)	CDH18 (ENSCARG00000009929)	EPC1 (ENSCARG00000009968)	KIF5B (ENSCARG00000010266)	ENSCARG00000010394	dpysl4 (ENSCARG00000010444)	ENSCARG00000011396
Cyprininae	ANCESTRAL SPECIES	532				ENSGT00940000161045.a	ENSGT01050000244940.a.b.qb	ENSGT01050000244940.a.b.pb	ENSGT00940000155509.b.a	ENSGT00940000156033.f	ENSGT01090000260051.b.a.a.b.a	ENSGT00940000159449.c.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a.a.a	ENSGT00390000017554 #17	ENSGT00940000156525.b #19	ENSGT00940000158286.e.b.a #20	ENSGT00950000183091.A.a.ab #22	ENSGT00940000158286.e.b.b #20	ENSGT00950000183091.A.a.`b #22	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e.b #29
Goldfish	MODERN SPECIES	30	FADS6 (ENSCARG00000011403)	ENSCARG00000011432	trim16 (ENSCARG00000011439)	exoc7 (ENSCARG00000011506)	ENSCARG00000012614	vclb (ENSCARG00000012626)	lrit1b (ENSCARG00000012669)	rgrb (ENSCARG00000012678)	slc18a3b (ENSCARG00000012685)	CHAT (ENSCARG00000012691)	ENSCARG00000012730	ENSCARG00000012761 #17	ENSCARG00000012768	ACADSB (ENSCARG00000012778) #19	HMX3 (ENSCARG00000012992) #20	bub3 (ENSCARG00000012996) #22	ENSCARG00000013007	ENSCARG00000013013	ENSCARG00000013019	ENSCARG00000013024	ENSCARG00000013032	ENSCARG00000013046	dock1 (ENSCARG00000013391)	INSYN2A (ENSCARG00000026378)	ADAM12 (ENSCARG00000026453)	FANK1 (ENSCARG00000027651)	dhx32a (ENSCARG00000027743)	bccip (ENSCARG00000027912)	wbp2 (ENSCARG00000027935)	ENSCARG00000027960	ENSCARG00000027975
Cyprininae_a	ANCESTRAL SPECIES	390								ENSGT00940000159449.c.c	ENSGT01060000248556.A.b.b	ENSGT00390000003652.c.a.a.a	ENSGT00390000017554 #17	ENSGT00940000156525.b #19	ENSGT00940000158286.e.b.b #20	ENSGT00950000183091.A.a.`b.b #22	ENSGT00940000158286.e.b.a #20	ENSGT00950000183091.A.a.ab #22	ENSGT00940000156414 #24	ENSGT00950000183091.A.a.`b.a #22	ENSGT00390000004719.b #25	ENSGT00630000089895.g #26	ENSGT00530000063371.B.e.a #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32	ENSGT00420000029824	ENSGT00940000160084.h.e	ENSGT00940000154289.B.e.b	ENSGT00940000154209.a.b.a	ENSGT00940000156661.b.b	ENSGT00950000183122.A.d.a	ENSGT00940000166815.b	ENSGT00940000167571.b
Golden-line barbel	MODERN SPECIES	1349									chst3b (ENSSGRG00000008790)	ENSSGRG00000008791	slc18a3b (ENSSGRG00000009541)	ENSSGRG00000009543	ENSSGRG00000009544	ENSSGRG00000009547 #17	HMX3 (ENSSGRG00000009550) #20	bub3 (ENSSGRG00000009552) #22	CPXM2 (ENSSGRG00000009565) #24	CHST15 (ENSSGRG00000009649) #25	oat (ENSSGRG00000009650) #26	fam53b (ENSSGRG00000009652) #29	hpdl (ENSSGRG00000009653)
Zebrafish	MODERN SPECIES	3													PSTK (ENSDARG00000115015) #17	ACADSB (ENSDARG00000076780) #19	HMX3 (ENSDARG00000096716) #20	bub3 (ENSDARG00000075883) #22	ENSDARG00000096738	ENSDARG00000117193 #24	ENSDARG00000116119	ENSDARG00000102972	chst3b (ENSDARG00000116042)	ENSDARG00000098983	ENSDARG00000104756	lrit1b (ENSDARG00000099406)	rgrb (ENSDARG00000098724)	slc18a3b (ENSDARG00000107527)	KCNMA1 (ENSDARG00000110727)	DLG5 (ENSDARG00000090949)	anxa11b (ENSDARG00000002632)	ppifb (ENSDARG00000052842)	ZMIZ1 (ENSDARG00000102279)
Clupeiformes	ANCESTRAL SPECIES	375												ENSGT00390000017554 #17	ENSGT00940000156525 #19	ENSGT00940000158286.e.b #20	ENSGT00940000160392 #21	ENSGT00950000183091.A.a #22	ENSGT00950000183001.a.a.c #23	ENSGT00940000156414 #24	ENSGT00390000004719.b #25	ENSGT00630000089895 #26	ENSGT00940000159002 #28	ENSGT00530000063371.B.e #29	ENSGT00530000063474.A	ENSGT00940000158045.a #32
Denticle herring	MODERN SPECIES	11	st6galnac1.1 (ENSDCDG00000020799)	CASKIN2 (ENSDCDG00000020802)	nme2a (ENSDCDG00000020812)	ca10a (ENSDCDG00000020817)	ENSDCDG00000020863	mrpl27 (ENSDCDG00000020865)	ENSDCDG00000020869	RAB37 (ENSDCDG00000020882)	nherf1a (ENSDCDG00000021165)	MBTD1 (ENSDCDG00000021188)	tdrkh (ENSDCDG00000021870)	PSTK (ENSDCDG00000021872) #17	ACADSB (ENSDCDG00000021884) #19	HMX3 (ENSDCDG00000013829) #20	hmx2 (ENSDCDG00000013834) #21	bub3 (ENSDCDG00000013841) #22	GPR26 (ENSDCDG00000013861) #23	CPXM2 (ENSDCDG00000013977) #24	CHST15 (ENSDCDG00000015706) #25	oat (ENSDCDG00000015712) #26	lhpp (ENSDCDG00000015724) #28	fam53b (ENSDCDG00000015728) #29	hpdl (ENSDCDG00000015733)	ZRANB1 (ENSDCDG00000015747) #32	ENSDCDG00000015765	asb5a (ENSDCDG00000015774)	prdm8 (ENSDCDG00000015784)	mtg1 (ENSDCDG00000015788)	sprn (ENSDCDG00000015792)	echs1 (ENSDCDG00000015797)	msx3 (ENSDCDG00000015829)
Atlantic herring	MODERN SPECIES	15	acbd4 (ENSCHAG00000019493)	hexim1 (ENSCHAG00000019498)	ARHGAP23 (ENSCHAG00000019508)	ENSCHAG00000019536	LASP1 (ENSCHAG00000019549)	plxdc1 (ENSCHAG00000019584)	ENSCHAG00000020121	cox19 (ENSCHAG00000020141)	RNPS1 (ENSCHAG00000020151)	ENSCHAG00000020158	MBTD1 (ENSCHAG00000002547)	ENSCHAG00000003108 #17	ACADSB (ENSCHAG00000003184) #19	CPXM2 (ENSCHAG00000004242) #24	oat (ENSCHAG00000005645) #26	bub3 (ENSCHAG00000006489) #22	ENSCHAG00000006576	ENSCHAG00000006707	ENSCHAG00000007158	ENSCHAG00000007279	ENSCHAG00000007292	zgc:92313 (ENSCHAG00000007297)	mapk7 (ENSCHAG00000007309)	vkorc1 (ENSCHAG00000007318)	ENSCHAG00000007329	ENSCHAG00000007607	ENSCHAG00000008541	ENSCHAG00000008897	ENSCHAG00000008920	ENSCHAG00000008935	ENSCHAG00000008953
Spotted gar	MODERN SPECIES	671	CCSER2 (ENSLOCG00000008422)	GRID1 (ENSLOCG00000008385)	ENSLOCG00000018237	ENSLOCG00000008373	WAPL (ENSLOCG00000008348)	ENSLOCG00000008336	plekha1a (ENSLOCG00000008307) #7	htra1b (ENSLOCG00000008292) #9	ENSLOCG00000008280	C10orf88 (ENSLOCG00000008269) #16	zgc:174164 (ENSLOCG00000008238)	ikzf5 (ENSLOCG00000008225) #18	ACADSB (ENSLOCG00000008211) #19	hmx3a (ENSLOCG00000008201) #20	hmx2 (ENSLOCG00000008191) #21	bub3 (ENSLOCG00000008177) #22	ENSLOCG00000008167	GPR26 (ENSLOCG00000008153) #23	CPXM2 (ENSLOCG00000008139) #24	CHST15 (ENSLOCG00000008128) #25	oat (ENSLOCG00000008099) #26	nkx1.2la (ENSLOCG00000008089) #27	lhpp (ENSLOCG00000008067) #28	fam53b (ENSLOCG00000008053) #29	eef1akmt2 (ENSLOCG00000008027) #30	abraxas2 (ENSLOCG00000008016) #31	hpdl (ENSLOCG00000008001)	zranb1b (ENSLOCG00000007990) #32	ctbp2a (ENSLOCG00000007959) #33	TEX36 (ENSLOCG00000007946) #34	EDRF1 (ENSLOCG00000007911) #35
Reedfish	MODERN SPECIES	10	ENSECRG00000008714	GRID1 (ENSECRG00000008736)	ENSECRG00000008794	ENSECRG00000008800	PLEKHA1 (ENSECRG00000008829) #7	ENSECRG00000008875	htra1b (ENSECRG00000008896) #9	ENSECRG00000008962	C10orf88 (ENSECRG00000009015) #16	ENSECRG00000009032	PSTK (ENSECRG00000009054) #17	ikzf5 (ENSECRG00000009065) #18	ACADSB (ENSECRG00000009079) #19	hmx3a (ENSECRG00000009105) #20	hmx2 (ENSECRG00000009113) #21	bub3 (ENSECRG00000009120) #22	GPR26 (ENSECRG00000009127) #23	CPXM2 (ENSECRG00000009153) #24	CHST15 (ENSECRG00000009214) #25	ENSECRG00000009226	oat (ENSECRG00000009240) #26	nkx1.2la (ENSECRG00000009252) #27	lhpp (ENSECRG00000009271) #28	fam53b (ENSECRG00000009292) #29	eef1akmt2 (ENSECRG00000009306) #30	abraxas2 (ENSECRG00000009317) #31	hpdl (ENSECRG00000009330)	zranb1b (ENSECRG00000009349) #32	ctbp2a (ENSECRG00000009364) #33	ENSECRG00000009392	ENSECRG00000009399
Elephant shark	MODERN SPECIES	1600	nsmce4a (ENSCMIG00000007525)	ENSCMIG00000007530	ly6pge (ENSCMIG00000007537)	ENSCMIG00000007542	plekha1a (ENSCMIG00000007549) #7	htra1b (ENSCMIG00000007553) #9	ENSCMIG00000007557 ##10	ENSCMIG00000007561	C10orf88 (ENSCMIG00000007568) #16	ENSCMIG00000007576	PSTK (ENSCMIG00000007617) #17	ikzf5 (ENSCMIG00000007619) #18	ikzf5 (ENSCMIG00000007622) #18	ACADSB (ENSCMIG00000007641) #19	hmx3a (ENSCMIG00000007663) #20	bub3 (ENSCMIG00000007668) #22	GPR26 (ENSCMIG00000007672) #23	CPXM2 (ENSCMIG00000007686) #24	CHST15 (ENSCMIG00000007713) #25	oat (ENSCMIG00000007767) #26	ENSCMIG00000007805	abraxas2 (ENSCMIG00000007814) #31	fam53b (ENSCMIG00000007827) #29	eef1akmt2 (ENSCMIG00000007830) #30	hpdl (ENSCMIG00000007834)	zranb1b (ENSCMIG00000007841) #32	ENSCMIG00000007855 #33	ENSCMIG00000007866	EDRF1 (ENSCMIG00000007899) #35	mmp21 (ENSCMIG00000007995) #36	UROS (ENSCMIG00000008000) #37
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a #22
Lamprey	MODERN SPECIES	741													ENSPMAG00000007537	ENSPMAG00000007561	ADRA2C (ENSPMAG00000007563)	bub3 (ENSPMAG00000007566) #22
Hagfish	MODERN SPECIES	813	ENSEBUG00000014586	HUS1 (ENSEBUG00000011437)	ENSEBUG00000005166	ENSEBUG00000010735	ENSEBUG00000001923	ENSEBUG00000016162	ENSEBUG00000005392	ENSEBUG00000015338	ENSEBUG00000000869	ENSEBUG00000016292	ENSEBUG00000006813 #19	ENSEBUG00000009044	ENSEBUG00000009685	zgc:152830 (ENSEBUG00000008419)	ENSEBUG00000009524	bub3 (ENSEBUG00000013247) #22	pold2 (ENSEBUG00000004796)	ENSEBUG00000008917 #23
Ciona	ANCESTRAL SPECIES	1162															ENSGT00390000003964.b.a.a	ENSGT00950000183091.A.a #22
Ciona savignyi	MODERN SPECIES	334	ENSCSAVG00000000539	ENSCSAVG00000000548	ENSCSAVG00000000549	ENSCSAVG00000000550	ENSCSAVG00000000551	ENSCSAVG00000000553	ENSCSAVG00000000554	ENSCSAVG00000000555	ENSCSAVG00000000557	ENSCSAVG00000000558	ENSCSAVG00000000560	ENSCSAVG00000000628	ENSCSAVG00000000631	ENSCSAVG00000000632	ENSCSAVG00000000633	ENSCSAVG00000000634 #22	ENSCSAVG00000000663	ENSCSAVG00000000672	ENSCSAVG00000000715	ENSCSAVG00000000787	ENSCSAVG00000000789	ENSCSAVG00000000791	ENSCSAVG00000000795	ENSCSAVG00000000811	ENSCSAVG00000000812	ENSCSAVG00000000813	ENSCSAVG00000000816	ENSCSAVG00000000820	ENSCSAVG00000000823	ENSCSAVG00000000825	ENSCSAVG00000000828
Ciona intestinalis	MODERN SPECIES	9	ENSCING00000012294	ENSCING00000018537	ENSCING00000022626	ENSCING00000009638	ENSCING00000009639	ENSCING00000009636	ENSCING00000023414	ENSCING00000009632	ENSCING00000009633	ENSCING00000009634	ENSCING00000009635	ENSCING00000019603	ENSCING00000022334	ENSCING00000022641	ENSCING00000024967	ENSCING00000009630 #22	ENSCING00000020450	ENSCING00000018175	ENSCING00000012290	ENSCING00000012292	ENSCING00000019815	ENSCING00000012291	ENSCING00000009631	ENSCING00000022393	ENSCING00000000333	ENSCING00000016274	ENSCING00000009427	ENSCING00000012284	ENSCING00000003872	ENSCING00000003868	ENSCING00000023632
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00950000183091.A.a #22
Caenorhabditis elegans	MODERN SPECIES	1	gst-17 (WBGene00001765)	gst-18 (WBGene00001766)	tag-10 (WBGene00006404)	C31C9.2 (WBGene00007836)	fbxa-167 (WBGene00007837)	fbxa-169 (WBGene00045289)	C31C9.9 (WBGene00305095)	C31C9.6 (WBGene00007840)	C31C9.7 (WBGene00007841)	rpoa-1 (WBGene00012999)	kqt-3 (WBGene00002235)	zipt-2.3 (WBGene00013207)	sre-46 (WBGene00044084)	Y54G9A.5 (WBGene00013208)	Y54G9A.7 (WBGene00013210)	bub-3 (WBGene00013209) #22	Y54G9A.9 (WBGene00013211)	R06B9.5 (WBGene00011056)	mig-14 (WBGene00003246)	arrd-14 (WBGene00011055)	arrd-13 (WBGene00011054)	arrd-11 (WBGene00011052)	arrd-12 (WBGene00011053)	C01B9.4 (WBGene00194890)	C01B9.1 (WBGene00007220)	ZK131.11 (WBGene00013934)	his-16 (WBGene00001890)	his-15 (WBGene00001889)	his-14 (WBGene00001888)	his-13 (WBGene00001887)	his-12 (WBGene00001886)
Fruitfly	MODERN SPECIES	19	CG7601 (FBgn0027583)	Kul (FBgn0039688)	CG18731 (FBgn0042213)	Naa40 (FBgn0039687)	Pcd (FBgn0024841)	CG34296 (FBgn0085325)	CG15506 (FBgn0039686)	Obp99b (FBgn0039685)	Dup99B (FBgn0250832)	Obp99d (FBgn0039684)	dmrt99B (FBgn0039683)	Obp99c (FBgn0039682)	Gycalpha99B (FBgn0013972)	CG7582 (FBgn0039681)	Cap-D2 (FBgn0039680)	Bub3 (FBgn0025457) #22	ppk19 (FBgn0039679)	Obp99a (FBgn0039678)	ppk30 (FBgn0039677)	ppk20 (FBgn0039676)	ppk21 (FBgn0039675)	Dop1R2 (FBgn0266137)	CG1907 (FBgn0039674)	Diedel2 (FBgn0262873)	CG7568 (FBgn0039673)	alph (FBgn0086361)	CG31041 (FBgn0051041)	CG11470 (FBgn0039671)	CG7567 (FBgn0039670)	Dr (FBgn0000492)	ND-20L (FBgn0039669)