Glires	ANCESTRAL SPECIES	2	ENSGT00940000153783.b.b.c.a.a.a ##10	ENSGT00940000153783.b.b.c.b ##10	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00970000194716	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Rodentia	ANCESTRAL SPECIES	2	ENSGT00940000153783.b.b.c.a.a.a ##10	ENSGT00940000153783.b.b.c.b ##10	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00970000194716	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00940000153783.b.b.c.a.a.a ##10	ENSGT00940000153783.b.b.c.b ##10	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00970000194716	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Hystricomorpha	ANCESTRAL SPECIES	6	ENSGT00950000182930.A.b #7	ENSGT00950000182930.A.a #8	ENSGT00950000182930.B #9	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00900000143836	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Hystricomorpha_a	ANCESTRAL SPECIES	4	ENSGT00950000182930.A.b #7	ENSGT00950000182930.A.a #8	ENSGT00950000182930.B #9	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT01100000266402 #18	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35	ENSGT00940000159619.a #36
Hystricomorpha_b	ANCESTRAL SPECIES	9	ENSGT00950000182930.A.b #7	ENSGT00950000182930.A.a #8	ENSGT00950000182930.B #9	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT01100000266402 #18	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35	ENSGT00940000159619.a #36
Long-tailed chinchilla	MODERN SPECIES	127	FETUB (ENSCLAG00000015483) #7	HRG (ENSCLAG00000015542) #8	ENSCLAG00000017074 #9	EIF4A2 (ENSCLAG00000014891) #10	RFC4 (ENSCLAG00000014582) #11	ADIPOQ (ENSCLAG00000016452) #12	ST6GAL1 (ENSCLAG00000015941) #13	RTP1 (ENSCLAG00000013765) #14	MASP1 (ENSCLAG00000012518) #15	SST (ENSCLAG00000015832) #16	RTP2 (ENSCLAG00000014964) #17	ENSCLAG00000017951 #18	BCL6 (ENSCLAG00000012339) #19	LPP (ENSCLAG00000015949) #20	TPRG1 (ENSCLAG00000013300) #21	TP63 (ENSCLAG00000012538) #22	P3H2 (ENSCLAG00000012801) #23	CLDN1 (ENSCLAG00000013178) #24	CLDN16 (ENSCLAG00000012605) #25	IL1RAP (ENSCLAG00000012363) #26	GMNC (ENSCLAG00000011473) #27	OSTN (ENSCLAG00000013977) #28	CCDC50 (ENSCLAG00000014114) #29	FGF12 (ENSCLAG00000011409) #30	MB21D2 (ENSCLAG00000014657) #31	PLAAT1 (ENSCLAG00000012403) #32	ATP13A5 (ENSCLAG00000012908) #33	ATP13A4 (ENSCLAG00000012524) #34	OPA1 (ENSCLAG00000012734) #35	HES1 (ENSCLAG00000015321) #36	CPN2 (ENSCLAG00000018106) #37
Degu	MODERN SPECIES	169	DNAJB11 (ENSODEG00000001870)	AHSG (ENSODEG00000001885) ##7	HRG (ENSODEG00000001904) #8	KNG1 (ENSODEG00000001927) #9	RFC4 (ENSODEG00000001999) #11	ADIPOQ (ENSODEG00000002012) #12	ST6GAL1 (ENSODEG00000002040) #13	RTP1 (ENSODEG00000000396) #14	MASP1 (ENSODEG00000000434) #15	ENSODEG00000000479	SST (ENSODEG00000000486) #16	RTP2 (ENSODEG00000000495) #17	BCL6 (ENSODEG00000000516) #19	LPP (ENSODEG00000000601) #20	TPRG1 (ENSODEG00000000645) #21	TP63 (ENSODEG00000000698) #22	P3H2 (ENSODEG00000000751) #23	CLDN1 (ENSODEG00000000775) #24	CLDN16 (ENSODEG00000000787) #25	TMEM207 (ENSODEG00000000814)	IL1RAP (ENSODEG00000000880) #26	ENSODEG00000000947	GMNC (ENSODEG00000000968) #27	OSTN (ENSODEG00000000984) #28	CCDC50 (ENSODEG00000001028) #29	ENSODEG00000018632	FGF12 (ENSODEG00000000898) #30	ENSODEG00000000915 #31	PLAAT1 (ENSODEG00000000928) #32	ATP13A5 (ENSODEG00000000942) #33
Guinea pig	MODERN SPECIES	7	FETUB (ENSCPOG00000011207) #7	HRG (ENSCPOG00000025939) #8	KNG1 (ENSCPOG00000012757) #9	ENSCPOG00000011183 #10	RFC4 (ENSCPOG00000011191) #11	ADIPOQ (ENSCPOG00000036737) #12	ST6GAL1 (ENSCPOG00000001200) #13	RTP1 (ENSCPOG00000001203) #14	MASP1 (ENSCPOG00000015723) #15	SST (ENSCPOG00000009662) #16	RTP2 (ENSCPOG00000009665) #17	BCL6 (ENSCPOG00000004090) #19	ENSCPOG00000033304 #18	LPP (ENSCPOG00000015584) #20	TPRG1 (ENSCPOG00000007437) #21	TP63 (ENSCPOG00000014770) #22	P3H2 (ENSCPOG00000004329) #23	CLDN1 (ENSCPOG00000037018) #24	CLDN16 (ENSCPOG00000008643) #25	IL1RAP (ENSCPOG00000008554) #26	GMNC (ENSCPOG00000019517) #27	OSTN (ENSCPOG00000024963) #28	CCDC50 (ENSCPOG00000013365) #29	FGF12 (ENSCPOG00000038518) #30	MB21D2 (ENSCPOG00000011028) #31	PLAAT1 (ENSCPOG00000008871) #32	ATP13A5 (ENSCPOG00000008873) #33	ATP13A4 (ENSCPOG00000008886) #34	OPA1 (ENSCPOG00000005925) #35	HES1 (ENSCPOG00000036195) #36	CPN2 (ENSCPOG00000037149) #37
Naked mole-rat female	MODERN SPECIES	27	ST6GAL1 (ENSHGLG00000037893) #13	ENSHGLG00000036874	RTP1 (ENSHGLG00000013919) #14	MASP1 (ENSHGLG00000013470) #15	ENSHGLG00000048542	ENSHGLG00000046703	ENSHGLG00000012948	SST (ENSHGLG00000019161) #16	RTP2 (ENSHGLG00000016449) #17	BCL6 (ENSHGLG00000016440) #19	ENSHGLG00000021340	LPP (ENSHGLG00000016385) #20	ENSHGLG00000036742	ENSHGLG00000042236	ENSHGLG00000039972 #21	TP63 (ENSHGLG00000016277) #22	P3H2 (ENSHGLG00000019175) #23	CLDN1 (ENSHGLG00000038289) #24	CLDN16 (ENSHGLG00000018130) #25	ENSHGLG00000035223	TMEM207 (ENSHGLG00000037564)	IL1RAP (ENSHGLG00000018108) #26	ENSHGLG00000036963 #26	ENSHGLG00000019218	GMNC (ENSHGLG00000017131) #27	ENSHGLG00000040250	ENSHGLG00000016933	ENSHGLG00000016923	OSTN (ENSHGLG00000039251) #28	ENSHGLG00000042558	CCDC50 (ENSHGLG00000016906) #29
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00950000182930.B #9	ENSGT00860000135739	ENSGT00940000153783.b.b.c.a.a.a ##10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00970000194716	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Marmotini	ANCESTRAL SPECIES	57	ENSGT00950000182930.B #9	ENSGT00860000135739	ENSGT00940000153783.b.b.c.a.a.a.a ##10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00900000143836	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Marmotini_b	ANCESTRAL SPECIES	79	ENSGT00950000182930.B #9	ENSGT00860000135739	ENSGT00940000153783.b.b.c.a.a.a.a ##10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00900000143836	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26
Squirrel	MODERN SPECIES	178	FETUB (ENSSTOG00000012584) #7	HRG (ENSSTOG00000012587) #8	KNG1 (ENSSTOG00000027812) #9	ENSSTOG00000012601 ##10	ENSSTOG00000012616 #11	ADIPOQ (ENSSTOG00000016020) #12	ST6GAL1 (ENSSTOG00000015751) #13	RTP1 (ENSSTOG00000010261) #14	MASP1 (ENSSTOG00000010265) #15	ENSSTOG00000010275	SST (ENSSTOG00000015070) #16	RTP2 (ENSSTOG00000025837) #17	BCL6 (ENSSTOG00000000843) #19	LPP (ENSSTOG00000004791) #20	TPRG1 (ENSSTOG00000013052) #21	TP63 (ENSSTOG00000013771) #22	P3H2 (ENSSTOG00000006501) #23	CLDN1 (ENSSTOG00000009637) #24	CLDN16 (ENSSTOG00000008723) #25
Arctic ground squirrel	MODERN SPECIES	67	ENSUPAG00010001535	EIF4A2 (ENSUPAG00010001415) ##10	RFC4 (ENSUPAG00010001386) #11	ADIPOQ (ENSUPAG00010001377) #12	ST6GAL1 (ENSUPAG00010001354) #13	RTP1 (ENSUPAG00010001348) #14	ENSUPAG00010001334	MASP1 (ENSUPAG00010001243) #15	ENSUPAG00010001238	SST (ENSUPAG00010001221) #16	RTP2 (ENSUPAG00010001211) #17	BCL6 (ENSUPAG00010001190) #19	ENSUPAG00010001184	LPP (ENSUPAG00010001116) #20	TPRG1 (ENSUPAG00010001096) #21	TP63 (ENSUPAG00010000340) #22	P3H2 (ENSUPAG00010000290) #23	CLDN1 (ENSUPAG00010000275) #24	CLDN16 (ENSUPAG00010000249) #25	TMEM207 (ENSUPAG00010000237)	IL1RAP (ENSUPAG00010000152) #26
Alpin marmot	MODERN SPECIES	65	EIF4A2 (ENSMMMG00000009054) ##10	RFC4 (ENSMMMG00000009263) #11	ADIPOQ (ENSMMMG00000009299) #12	ENSMMMG00000009302	ST6GAL1 (ENSMMMG00000009312) #13	RTP1 (ENSMMMG00000009324) #14	MASP1 (ENSMMMG00000009332) #15	ENSMMMG00000009397	ENSMMMG00000009405	SST (ENSMMMG00000009413) #16	RTP2 (ENSMMMG00000009435) #17	BCL6 (ENSMMMG00000009441) #19	ENSMMMG00000009454	LPP (ENSMMMG00000009476) #20	TPRG1 (ENSMMMG00000009493) #21	TP63 (ENSMMMG00000009524) #22	P3H2 (ENSMMMG00000010050) #23	CLDN1 (ENSMMMG00000010077) #24	CLDN16 (ENSMMMG00000010089) #25	TMEM207 (ENSMMMG00000010116)	IL1RAP (ENSMMMG00000010137) #26	GMNC (ENSMMMG00000010205) #27	OSTN (ENSMMMG00000010224) #28	UTS2B (ENSMMMG00000010236)	CCDC50 (ENSMMMG00000010258) #29	ENSMMMG00000010324 #30	ENSMMMG00000010336 #30	MB21D2 (ENSMMMG00000010348) #31	PLAAT1 (ENSMMMG00000010364) #32	ATP13A5 (ENSMMMG00000010381) #33	ATP13A4 (ENSMMMG00000010493) #34
Eurasian red squirrel	MODERN SPECIES	1	ENSSVLG00005008819 ##10	RFC4 (ENSSVLG00005008782) #11	ENSSVLG00005008759	ADIPOQ (ENSSVLG00005008730) #12	ST6GAL1 (ENSSVLG00005008652) #13	RTP1 (ENSSVLG00005008628) #14	MASP1 (ENSSVLG00005008564) #15	ENSSVLG00005008533	SST (ENSSVLG00005008514) #16	RTP2 (ENSSVLG00005008485) #17	ENSSVLG00005008392 #19	ENSSVLG00005008361	LPP (ENSSVLG00005008318) #20	TPRG1 (ENSSVLG00005008266) #21	ENSSVLG00005008233	TP63 (ENSSVLG00005007416) #22	P3H2 (ENSSVLG00005006989) #23	CLDN1 (ENSSVLG00005006941) #24	CLDN16 (ENSSVLG00005006918) #25	TMEM207 (ENSSVLG00005006891)	IL1RAP (ENSSVLG00005006739) #26	GMNC (ENSSVLG00005006667) #27	OSTN (ENSSVLG00005006607) #28	UTS2B (ENSSVLG00005006554)	ENSSVLG00005006532	CCDC50 (ENSSVLG00005006494) #29	FGF12 (ENSSVLG00005006414) #30	MB21D2 (ENSSVLG00005006368) #31	ENSSVLG00005006347	PLAAT1 (ENSSVLG00005006328) #32	ATP13A5 (ENSSVLG00005006143) #33
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00950000182930.A.a #8	ENSGT00950000182930.B #9	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00900000143836	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Myomorpha	ANCESTRAL SPECIES	14	ENSGT00950000182930.A.a #8	ENSGT00950000182930.B #9	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00900000143836	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Muroidea	ANCESTRAL SPECIES	11	ENSGT00950000182930.A.a #8	ENSGT00950000182930.B #9	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00900000143836	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Muroidea_A	ANCESTRAL SPECIES	17	ENSGT00950000182930.A.a #8	ENSGT00950000182930.B #9	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00900000143836	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Cricetidae	ANCESTRAL SPECIES	16	ENSGT00950000182930.A.a #8	ENSGT00950000182930.B #9	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00900000143836	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Cricetidae_B	ANCESTRAL SPECIES	13	ENSGT00950000182930.A.a #8	ENSGT00950000182930.B #9	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00900000143836	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Northern American deer mouse	MODERN SPECIES	3	ENSPEMG00000021494 #8	ENSPEMG00000009770 #9	ENSPEMG00000021495 #10	Rfc4 (ENSPEMG00000020418) #11	Adipoq (ENSPEMG00000031123) #12	St6gal1 (ENSPEMG00000016299) #13	Rtp1 (ENSPEMG00000014761) #14	Masp1 (ENSPEMG00000011384) #15	ENSPEMG00000025463	Sst (ENSPEMG00000017596) #16	Rtp2 (ENSPEMG00000020551) #17	Bcl6 (ENSPEMG00000020985) #19	Gm37419 (ENSPEMG00000002742)	Lpp (ENSPEMG00000011792) #20	Tprg (ENSPEMG00000020656) #21	Trp63 (ENSPEMG00000011679) #22	P3h2 (ENSPEMG00000016547) #23	Cldn1 (ENSPEMG00000025850) #24	Cldn16 (ENSPEMG00000013939) #25	Tmem207 (ENSPEMG00000030277)	Il1rap (ENSPEMG00000017318) #26	Gmnc (ENSPEMG00000023220) #27	Ostn (ENSPEMG00000020363) #28	Uts2b (ENSPEMG00000023514)	Ccdc50 (ENSPEMG00000020293) #29	ENSPEMG00000025234	Fgf12 (ENSPEMG00000012162) #30	Mb21d2 (ENSPEMG00000013470) #31	Plaat1 (ENSPEMG00000013741) #32	Atp13a5 (ENSPEMG00000015502) #33	Atp13a4 (ENSPEMG00000005881) #34
Prairie vole	MODERN SPECIES	7	ENSMOCG00000005648 #9	Eif4a2 (ENSMOCG00000021828) #10	ENSMOCG00000010433 #11	Adipoq (ENSMOCG00000012322) #12	ENSMOCG00000020013	St6gal1 (ENSMOCG00000006409) #13	Rtp1 (ENSMOCG00000015619) #14	Masp1 (ENSMOCG00000013690) #15	ENSMOCG00000014620	Sst (ENSMOCG00000012687) #16	Rtp2 (ENSMOCG00000001704) #17	Bcl6 (ENSMOCG00000002694) #19	Gm37419 (ENSMOCG00000007874)	Lpp (ENSMOCG00000002241) #20	Tprg (ENSMOCG00000003239) #21	Trp63 (ENSMOCG00000015252) #22	P3h2 (ENSMOCG00000008061) #23	Cldn1 (ENSMOCG00000012023) #24	Cldn16 (ENSMOCG00000011704) #25	Tmem207 (ENSMOCG00000015831)	Il1rap (ENSMOCG00000005743) #26	Gmnc (ENSMOCG00000016556) #27	Ostn (ENSMOCG00000000665) #28	ENSMOCG00000012392	Ccdc50 (ENSMOCG00000021446) #29	Fgf12 (ENSMOCG00000012507) #30	Mb21d2 (ENSMOCG00000010129) #31	Plaat1 (ENSMOCG00000002137) #32	Atp13a5 (ENSMOCG00000013629) #33	Atp13a4 (ENSMOCG00000021525) #34	Opa1 (ENSMOCG00000008528) #35
Cricetinae	ANCESTRAL SPECIES	10	ENSGT00950000182930.A.b #7	ENSGT00950000182930.A.a #8	ENSGT00950000182930.B #9	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Chinese hamster chok1gshd	MODERN SPECIES	382	ENSCGRG00001018793 #9	Eif4a2 (ENSCGRG00001022442) #10	Rfc4 (ENSCGRG00001003704) #11	Adipoq (ENSCGRG00001004804) #12	St6gal1 (ENSCGRG00001012276) #13	ENSCGRG00001012307	Rtp1 (ENSCGRG00001015248) #14	Masp1 (ENSCGRG00001024632) #15	ENSCGRG00001013991	Sst (ENSCGRG00001017689) #16	Rtp2 (ENSCGRG00001023610) #17	Bcl6 (ENSCGRG00001013589) #19	Gm37419 (ENSCGRG00001011798)	ENSCGRG00001019717	Tprg (ENSCGRG00001021582) #21	Trp63 (ENSCGRG00001009778) #22	P3h2 (ENSCGRG00001021764) #23	Cldn1 (ENSCGRG00001024994) #24	Cldn16 (ENSCGRG00001002709) #25	Tmem207 (ENSCGRG00001007696)	ENSCGRG00001009646	Il1rap (ENSCGRG00001017518) #26	Gmnc (ENSCGRG00001014744) #27	Ostn (ENSCGRG00001021571) #28	Uts2b (ENSCGRG00001017532)	Ccdc50 (ENSCGRG00001021357) #29	Fgf12 (ENSCGRG00001012908) #30	Mb21d2 (ENSCGRG00001021085) #31	Plaat1 (ENSCGRG00001000460) #32	Atp13a5 (ENSCGRG00001024264) #33	Atp13a4 (ENSCGRG00001024242) #34
Golden Hamster	MODERN SPECIES	645	Ahsg (ENSMAUG00000019960) ##7	Fetub (ENSMAUG00000008221) #7	Hrg (ENSMAUG00000016556) #8	ENSMAUG00000003605 #9	Rfc4 (ENSMAUG00000004500) #11	Adipoq (ENSMAUG00000020419) #12	St6gal1 (ENSMAUG00000015040) #13	Rtp1 (ENSMAUG00000021841) #14	Masp1 (ENSMAUG00000009980) #15	ENSMAUG00000008425	Sst (ENSMAUG00000016983) #16	Gm37419 (ENSMAUG00000009832)	Bcl6 (ENSMAUG00000010580) #19	Lpp (ENSMAUG00000015219) #20	Tprg (ENSMAUG00000014159) #21	Trp63 (ENSMAUG00000008602) #22	P3h2 (ENSMAUG00000004803) #23	ENSMAUG00000005611	Cldn16 (ENSMAUG00000010011) #25	Tmem207 (ENSMAUG00000018884)	Il1rap (ENSMAUG00000021310) #26	Gmnc (ENSMAUG00000010906) #27	Ostn (ENSMAUG00000015065) #28	Uts2b (ENSMAUG00000014754)	Ccdc50 (ENSMAUG00000009454) #29	Fgf12 (ENSMAUG00000009873) #30	Mb21d2 (ENSMAUG00000015222) #31	Plaat1 (ENSMAUG00000009846) #32	Atp13a5 (ENSMAUG00000005310) #33	ENSMAUG00000014783 #34	ENSMAUG00000013061 #35
Murinae	ANCESTRAL SPECIES	13	ENSGT00950000182930.A.a #8	ENSGT00950000182930.B #9	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00900000143836	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Mus	ANCESTRAL SPECIES	13	ENSGT00950000182930.A.a #8	ENSGT00950000182930.B #9	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00900000143836	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Mus_A	ANCESTRAL SPECIES	18	ENSGT00950000182930.B.l #9	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00900000143500	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00900000143836	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Mus_B	ANCESTRAL SPECIES	18	ENSGT00950000182930.B.l #9	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00900000143500	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00900000143836	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Mus_C	ANCESTRAL SPECIES	12	ENSGT00950000182930.A.a #8	ENSGT00950000182930.B.l #9	ENSGT00940000153783.b.b.c.a.b #10	ENSGT00550000074917 #11	ENSGT00940000159828 #12	ENSGT00900000143500	ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
spretus	MODERN SPECIES	7	Hrg (MGP_SPRETEiJ_G0021506) #8	MGP_SPRETEiJ_G0021507 #9	Eif4a2 (MGP_SPRETEiJ_G0021508) #10	Rfc4 (MGP_SPRETEiJ_G0021509) #11	Adipoq (MGP_SPRETEiJ_G0021510) #12	MGP_SPRETEiJ_G0021511	St6gal1 (MGP_SPRETEiJ_G0021512) #13	Rtp1 (MGP_SPRETEiJ_G0021513) #14	MGP_SPRETEiJ_G0021514 #15	Rtp4 (MGP_SPRETEiJ_G0021515)	Sst (MGP_SPRETEiJ_G0021516) #16	Rtp2 (MGP_SPRETEiJ_G0021517) #17	Bcl6 (MGP_SPRETEiJ_G0021518) #19	Lpp (MGP_SPRETEiJ_G0021519) #20	Tprg (MGP_SPRETEiJ_G0021520) #21	Trp63 (MGP_SPRETEiJ_G0021521) #22	P3h2 (MGP_SPRETEiJ_G0021522) #23	Cldn1 (MGP_SPRETEiJ_G0021523) #24	Cldn16 (MGP_SPRETEiJ_G0021524) #25	Tmem207 (MGP_SPRETEiJ_G0021525)	Il1rap (MGP_SPRETEiJ_G0021526) #26	Gmnc (MGP_SPRETEiJ_G0021527) #27	Ostn (MGP_SPRETEiJ_G0021528) #28	Uts2b (MGP_SPRETEiJ_G0021529)	MGP_SPRETEiJ_G0021530 #29	Fgf12 (MGP_SPRETEiJ_G0021531) #30	Mb21d2 (MGP_SPRETEiJ_G0021532) #31	Plaat1 (MGP_SPRETEiJ_G0021533) #32	Atp13a5 (MGP_SPRETEiJ_G0021534) #33	Atp13a4 (MGP_SPRETEiJ_G0021535) #34	Opa1 (MGP_SPRETEiJ_G0021536) #35
Steppe mouse	MODERN SPECIES	75															Tprg (ENSMSIG00000008932) #21	Trp63 (ENSMSIG00000007986) #22	P3h2 (ENSMSIG00000007958) #23	Cldn1 (ENSMSIG00000007944) #24	Cldn16 (ENSMSIG00000007933) #25	Tmem207 (ENSMSIG00000007915)	Il1rap (ENSMSIG00000007880) #26	Gmnc (ENSMSIG00000007759) #27	Ostn (ENSMSIG00000007748) #28	Uts2b (ENSMSIG00000007715)	Ccdc50 (ENSMSIG00000007628) #29	ENSMSIG00000007596	Fgf12 (ENSMSIG00000007454) #30	Mb21d2 (ENSMSIG00000007424) #31	Plaat1 (ENSMSIG00000007402) #32	Atp13a5 (ENSMSIG00000007166) #33	Atp13a4 (ENSMSIG00000006926) #34
Mouse	MODERN SPECIES	7	Kng2 (ENSMUSG00000060459) #9	Kng1 (ENSMUSG00000022875) #9	Eif4a2 (ENSMUSG00000022884) #10	Rfc4 (ENSMUSG00000022881) #11	Adipoq (ENSMUSG00000022878) #12	St6gal1 (ENSMUSG00000022885) #13	Rtp1 (ENSMUSG00000033383) #14	Masp1 (ENSMUSG00000022887) #15	Rtp4 (ENSMUSG00000033355)	Sst (ENSMUSG00000004366) #16	Rtp2 (ENSMUSG00000047531) #17	Bcl6 (ENSMUSG00000022508) #19	Gm37419 (ENSMUSG00000110291)	Lpp (ENSMUSG00000033306) #20	Tprg (ENSMUSG00000048399) #21	Trp63 (ENSMUSG00000022510) #22	P3h2 (ENSMUSG00000038168) #23	Cldn1 (ENSMUSG00000022512) #24	Cldn16 (ENSMUSG00000038148) #25	Tmem207 (ENSMUSG00000091972)	Il1rap (ENSMUSG00000022514) #26	Gmnc (ENSMUSG00000068428) #27	Ostn (ENSMUSG00000052276) #28	Uts2b (ENSMUSG00000056423)	Ccdc50 (ENSMUSG00000038127) #29	Fgf12 (ENSMUSG00000022523) #30	Mb21d2 (ENSMUSG00000051065) #31	Plaat1 (ENSMUSG00000022525) #32	Atp13a5 (ENSMUSG00000048939) #33	Atp13a4 (ENSMUSG00000038094) #34	Opa1 (ENSMUSG00000038084) #35
Ryukyu mouse	MODERN SPECIES	7	Hrg (MGP_CAROLIEiJ_G0020610) #8	MGP_CAROLIEiJ_G0020611 #9	MGP_CAROLIEiJ_G0020612 ##10	Rfc4 (MGP_CAROLIEiJ_G0020613) #11	Adipoq (MGP_CAROLIEiJ_G0020614) #12	MGP_CAROLIEiJ_G0020615	St6gal1 (MGP_CAROLIEiJ_G0020616) #13	Rtp1 (MGP_CAROLIEiJ_G0020617) #14	MGP_CAROLIEiJ_G0020618 #15	MGP_CAROLIEiJ_G0020619	Sst (MGP_CAROLIEiJ_G0020620) #16	Rtp2 (MGP_CAROLIEiJ_G0020621) #17	Bcl6 (MGP_CAROLIEiJ_G0020622) #19	Lpp (MGP_CAROLIEiJ_G0020623) #20	Tprg (MGP_CAROLIEiJ_G0020624) #21	Trp63 (MGP_CAROLIEiJ_G0020625) #22	P3h2 (MGP_CAROLIEiJ_G0020626) #23	Cldn1 (MGP_CAROLIEiJ_G0020627) #24	Cldn16 (MGP_CAROLIEiJ_G0020628) #25	Tmem207 (MGP_CAROLIEiJ_G0020629)	Il1rap (MGP_CAROLIEiJ_G0020630) #26	Gmnc (MGP_CAROLIEiJ_G0020631) #27	Ostn (MGP_CAROLIEiJ_G0020632) #28	MGP_CAROLIEiJ_G0020633	MGP_CAROLIEiJ_G0020634 #29	Fgf12 (MGP_CAROLIEiJ_G0020635) #30	Mb21d2 (MGP_CAROLIEiJ_G0020636) #31	Plaat1 (MGP_CAROLIEiJ_G0020637) #32	Atp13a5 (MGP_CAROLIEiJ_G0020638) #33	Atp13a4 (MGP_CAROLIEiJ_G0020639) #34	Opa1 (MGP_CAROLIEiJ_G0020640) #35
Shrew mouse	MODERN SPECIES	3	Fetub (MGP_PahariEiJ_G0016313) #7	Hrg (MGP_PahariEiJ_G0016314) #8	Eif4a2 (MGP_PahariEiJ_G0016317) #10	MGP_PahariEiJ_G0016318 #11	Adipoq (MGP_PahariEiJ_G0016319) #12	MGP_PahariEiJ_G0016320	St6gal1 (MGP_PahariEiJ_G0016321) #13	Rtp1 (MGP_PahariEiJ_G0016322) #14	MGP_PahariEiJ_G0016323 #15	MGP_PahariEiJ_G0016324	Sst (MGP_PahariEiJ_G0016325) #16	Rtp2 (MGP_PahariEiJ_G0016326) #17	Bcl6 (MGP_PahariEiJ_G0016327) #19	Lpp (MGP_PahariEiJ_G0016328) #20	Tprg (MGP_PahariEiJ_G0016329) #21	Trp63 (MGP_PahariEiJ_G0016330) #22	P3h2 (MGP_PahariEiJ_G0016331) #23	Cldn1 (MGP_PahariEiJ_G0016332) #24	Cldn16 (MGP_PahariEiJ_G0016333) #25	Tmem207 (MGP_PahariEiJ_G0016334)	Il1rap (MGP_PahariEiJ_G0016335) #26	Gmnc (MGP_PahariEiJ_G0016336) #27	Ostn (MGP_PahariEiJ_G0016337) #28	Uts2b (MGP_PahariEiJ_G0016338)	MGP_PahariEiJ_G0016339 #29	Fgf12 (MGP_PahariEiJ_G0016340) #30	Mb21d2 (MGP_PahariEiJ_G0016341) #31	Plaat1 (MGP_PahariEiJ_G0016342) #32	Atp13a5 (MGP_PahariEiJ_G0016343) #33	Atp13a4 (MGP_PahariEiJ_G0016344) #34	Opa1 (MGP_PahariEiJ_G0016345) #35
Rat	MODERN SPECIES	2	Kng1 (ENSRNOG00000030387) #9	Eif4a2 (ENSRNOG00000001815) #10	Rfc4 (ENSRNOG00000001816) #11	Adipoq (ENSRNOG00000001821) #12	St6gal1 (ENSRNOG00000001823) #13	Rtp1 (ENSRNOG00000021992) #14	Masp1 (ENSRNOG00000001827) #15	Rtp4 (ENSRNOG00000066242)	Sst (ENSRNOG00000001837) #16	Rtp2 (ENSRNOG00000022160) #17	Gm37419 (ENSRNOG00000069169)	Bcl6 (ENSRNOG00000001843) #19	LOC100365839 (ENSRNOG00000048109)	Lpp (ENSRNOG00000031669) #20	Tprg1 (ENSRNOG00000063970) #21	Tp63 (ENSRNOG00000001924) #22	P3h2 (ENSRNOG00000055751) #23	Cldn1 (ENSRNOG00000001926) #24	Cldn16 (ENSRNOG00000055138) #25	Tmem207 (ENSRNOG00000064931)	Il1rap (ENSRNOG00000001928) #26	Gmnc (ENSRNOG00000038505) #27	Ostn (ENSRNOG00000030462) #28	Uts2b (ENSRNOG00000038512)	Ccdc50 (ENSRNOG00000001930) #29	ENSRNOG00000067098	Fgf12 (ENSRNOG00000001931) #30	Mb21d2 (ENSRNOG00000024040) #31	Plaat1 (ENSRNOG00000001711) #32	Atp13a5 (ENSRNOG00000024127) #33	Il13ra1 (ENSRNOG00000001713)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1073													ENSNGAG00000010532 #19	Lpp (ENSNGAG00000020023) #20	Tprg (ENSNGAG00000018094) #21	Trp63 (ENSNGAG00000019130) #22	P3h2 (ENSNGAG00000000626) #23	Cldn1 (ENSNGAG00000011403) #24	Cldn16 (ENSNGAG00000022077) #25	Tmem207 (ENSNGAG00000024223)	Il1rap (ENSNGAG00000021840) #26	Gmnc (ENSNGAG00000019785) #27	Ostn (ENSNGAG00000013923) #28	Ccdc50 (ENSNGAG00000017549) #29
Lesser Egyptian jerboa	MODERN SPECIES	54	Fetub (ENSJJAG00000016431) #7	Hrg (ENSJJAG00000017501) #8	ENSJJAG00000013534 #9	Eif4a2 (ENSJJAG00000021948) #10	Rfc4 (ENSJJAG00000013310) #11	Adipoq (ENSJJAG00000012829) #12	St6gal1 (ENSJJAG00000011080) #13	Rtp1 (ENSJJAG00000006636) #14	Masp1 (ENSJJAG00000001597) #15	Sst (ENSJJAG00000011116) #16	ENSJJAG00000013069 #17	Bcl6 (ENSJJAG00000017558) #19	Lpp (ENSJJAG00000005575) #20	Tprg (ENSJJAG00000010735) #21	ENSJJAG00000008682	Trp63 (ENSJJAG00000024331) #22	P3h2 (ENSJJAG00000013941) #23	Cldn1 (ENSJJAG00000005290) #24	Cldn16 (ENSJJAG00000011916) #25	Tmem207 (ENSJJAG00000019213)	Il1rap (ENSJJAG00000023480) #26	Gmnc (ENSJJAG00000005924) #27	ENSJJAG00000014895	ENSJJAG00000016353	Ostn (ENSJJAG00000011935) #28	Uts2b (ENSJJAG00000009999)	Ccdc50 (ENSJJAG00000013724) #29	Fgf12 (ENSJJAG00000010829) #30	ENSJJAG00000022315 #31	Plaat1 (ENSJJAG00000020429) #32	Atp13a5 (ENSJJAG00000000516) #33
Kangaroo rat	MODERN SPECIES	364												Rtp2 (ENSDORG00000005606) #17	Bcl6 (ENSDORG00000005608) #19	Lpp (ENSDORG00000009250) #20	Tprg (ENSDORG00000007733) #21	Trp63 (ENSDORG00000002061) #22	P3h2 (ENSDORG00000001518) #23	Cldn1 (ENSDORG00000029833) #24	Cldn16 (ENSDORG00000008134) #25	Tmem207 (ENSDORG00000024124)	Il1rap (ENSDORG00000014736) #26	Gmnc (ENSDORG00000002326) #27	Ostn (ENSDORG00000008337) #28	ENSDORG00000006097	ENSDORG00000029288 #29	Fgf12 (ENSDORG00000004553) #30	Mb21d2 (ENSDORG00000029028) #31	Plaat1 (ENSDORG00000009577) #32	Atp13a5 (ENSDORG00000009578) #33	Atp13a4 (ENSDORG00000005640) #34	Opa1 (ENSDORG00000014872) #35
Lagomorpha	ANCESTRAL SPECIES	9						ENSGT00940000157053 #13	ENSGT00940000161858 #14	ENSGT00950000183084.b.b #15	ENSGT00940000162610	ENSGT00510000047914.b #16	ENSGT00940000162172 #17	ENSGT00940000156311 #19	ENSGT00970000194716	ENSGT00940000156022.b #20	ENSGT00390000001652.f.b #21	ENSGT00950000183153.c.b.a.a #22	ENSGT00940000159593 #23	ENSGT00940000155387 #24	ENSGT00730000111162 #25	ENSGT00390000006126	ENSGT01090000260076.a #26	ENSGT00940000153270.b.b #27	ENSGT00390000001750 #28	ENSGT00390000003511	ENSGT00390000011058.b #29	ENSGT00940000155929 #30	ENSGT01050000244976.b.a #31	ENSGT00940000156634 #32	ENSGT00940000160327 #33	ENSGT00940000159448 #34	ENSGT00550000074851 #35
Rabbit	MODERN SPECIES	5	MCF2L2 (ENSOCUG00000008674)	B3GNT5 (ENSOCUG00000008691)	ADIPOQ (ENSOCUG00000026268) #12	ENSOCUG00000032488	ST6GAL1 (ENSOCUG00000027209) #13	RTP1 (ENSOCUG00000000046) #14	MASP1 (ENSOCUG00000000049) #15	ENSOCUG00000007680	SST (ENSOCUG00000007564) #16	RTP2 (ENSOCUG00000005426) #17	BCL6 (ENSOCUG00000005429) #19	ENSOCUG00000030680	LPP (ENSOCUG00000011764) #20	TPRG1 (ENSOCUG00000015959) #21	ENSOCUG00000038822	TP63 (ENSOCUG00000016465) #22	P3H2 (ENSOCUG00000011014) #23	CLDN1 (ENSOCUG00000011464) #24	CLDN16 (ENSOCUG00000011471) #25	TMEM207 (ENSOCUG00000029314)	IL1RAP (ENSOCUG00000004870) #26	GMNC (ENSOCUG00000009539) #27	OSTN (ENSOCUG00000007035) #28	UTS2B (ENSOCUG00000007038)	ENSOCUG00000013247	ENSOCUG00000035755	CCDC50 (ENSOCUG00000012695) #29	ENSOCUG00000026253	FGF12 (ENSOCUG00000007581) #30	MB21D2 (ENSOCUG00000015208) #31	ENSOCUG00000039155
Pika	MODERN SPECIES	3378																TP63 (ENSOPRG00000002855) #22