Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00940000153783.b.b.c.a.a.a ##8 ENSGT00940000153783.b.b.c.b ##8 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00970000194716 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Glires ANCESTRAL SPECIES 2 ENSGT00940000153783.b.b.c.a.a.a ##8 ENSGT00940000153783.b.b.c.b ##8 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00970000194716 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Rodentia ANCESTRAL SPECIES 2 ENSGT00940000153783.b.b.c.a.a.a ##8 ENSGT00940000153783.b.b.c.b ##8 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00970000194716 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Rodentia_B ANCESTRAL SPECIES 2 ENSGT00950000182930.A.a ##7 ENSGT00950000182930.B #7 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00900000143836 #17 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Myomorpha ANCESTRAL SPECIES 14 ENSGT00950000182930.A.a ##7 ENSGT00950000182930.B #7 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00900000143836 #17 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Muroidea ANCESTRAL SPECIES 11 ENSGT00950000182930.A.a ##7 ENSGT00950000182930.B #7 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00900000143836 #17 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Muroidea_A ANCESTRAL SPECIES 17 ENSGT00950000182930.A.a ##7 ENSGT00950000182930.B #7 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00900000143836 #17 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Murinae ANCESTRAL SPECIES 13 ENSGT00950000182930.A.a ##7 ENSGT00950000182930.B #7 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00900000143836 #17 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Rat MODERN SPECIES 2 Kng1 (ENSRNOG00000030387) #7 Eif4a2 (ENSRNOG00000001815) #8 Rfc4 (ENSRNOG00000001816) #9 Adipoq (ENSRNOG00000001821) #10 St6gal1 (ENSRNOG00000001823) #11 Rtp1 (ENSRNOG00000021992) #12 Masp1 (ENSRNOG00000001827) #13 Rtp4 (ENSRNOG00000066242) #14 Sst (ENSRNOG00000001837) #15 Rtp2 (ENSRNOG00000022160) #16 Gm37419 (ENSRNOG00000069169) #17 Bcl6 (ENSRNOG00000001843) #18 LOC100365839 (ENSRNOG00000048109) #19 Lpp (ENSRNOG00000031669) #20 Tprg1 (ENSRNOG00000063970) #21 Tp63 (ENSRNOG00000001924) #22 P3h2 (ENSRNOG00000055751) #23 Cldn1 (ENSRNOG00000001926) #24 Cldn16 (ENSRNOG00000055138) #25 Tmem207 (ENSRNOG00000064931) #26 Il1rap (ENSRNOG00000001928) #27 Gmnc (ENSRNOG00000038505) #28 Ostn (ENSRNOG00000030462) #29 Uts2b (ENSRNOG00000038512) #30 Ccdc50 (ENSRNOG00000001930) #31 ENSRNOG00000067098 #32 Fgf12 (ENSRNOG00000001931) #33 Mb21d2 (ENSRNOG00000024040) #34 Plaat1 (ENSRNOG00000001711) #35 Atp13a5 (ENSRNOG00000024127) #36 Il13ra1 (ENSRNOG00000001713) #37 Mus ANCESTRAL SPECIES 13 ENSGT00950000182930.A.a ##7 ENSGT00950000182930.B #7 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00900000143836 #17 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Mus_A ANCESTRAL SPECIES 18 ENSGT00950000182930.B.l #7 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00900000143500 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00900000143836 #17 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Mus_B ANCESTRAL SPECIES 18 ENSGT00950000182930.B.l #7 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00900000143500 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00900000143836 #17 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Mus_C ANCESTRAL SPECIES 12 ENSGT00950000182930.A.a ##7 ENSGT00950000182930.B.l #7 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00900000143500 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 spretus MODERN SPECIES 7 Hrg (MGP_SPRETEiJ_G0021506) ##7 MGP_SPRETEiJ_G0021507 #7 Eif4a2 (MGP_SPRETEiJ_G0021508) #8 Rfc4 (MGP_SPRETEiJ_G0021509) #9 Adipoq (MGP_SPRETEiJ_G0021510) #10 MGP_SPRETEiJ_G0021511 St6gal1 (MGP_SPRETEiJ_G0021512) #11 Rtp1 (MGP_SPRETEiJ_G0021513) #12 MGP_SPRETEiJ_G0021514 #13 Rtp4 (MGP_SPRETEiJ_G0021515) #14 Sst (MGP_SPRETEiJ_G0021516) #15 Rtp2 (MGP_SPRETEiJ_G0021517) #16 Bcl6 (MGP_SPRETEiJ_G0021518) #18 Lpp (MGP_SPRETEiJ_G0021519) #20 Tprg (MGP_SPRETEiJ_G0021520) #21 Trp63 (MGP_SPRETEiJ_G0021521) #22 P3h2 (MGP_SPRETEiJ_G0021522) #23 Cldn1 (MGP_SPRETEiJ_G0021523) #24 Cldn16 (MGP_SPRETEiJ_G0021524) #25 Tmem207 (MGP_SPRETEiJ_G0021525) #26 Il1rap (MGP_SPRETEiJ_G0021526) #27 Gmnc (MGP_SPRETEiJ_G0021527) #28 Ostn (MGP_SPRETEiJ_G0021528) #29 Uts2b (MGP_SPRETEiJ_G0021529) #30 MGP_SPRETEiJ_G0021530 #31 Fgf12 (MGP_SPRETEiJ_G0021531) #33 Mb21d2 (MGP_SPRETEiJ_G0021532) #34 Plaat1 (MGP_SPRETEiJ_G0021533) #35 Atp13a5 (MGP_SPRETEiJ_G0021534) #36 Atp13a4 (MGP_SPRETEiJ_G0021535) Opa1 (MGP_SPRETEiJ_G0021536) Steppe mouse MODERN SPECIES 75 Tprg (ENSMSIG00000008932) #21 Trp63 (ENSMSIG00000007986) #22 P3h2 (ENSMSIG00000007958) #23 Cldn1 (ENSMSIG00000007944) #24 Cldn16 (ENSMSIG00000007933) #25 Tmem207 (ENSMSIG00000007915) #26 Il1rap (ENSMSIG00000007880) #27 Gmnc (ENSMSIG00000007759) #28 Ostn (ENSMSIG00000007748) #29 Uts2b (ENSMSIG00000007715) #30 Ccdc50 (ENSMSIG00000007628) #31 ENSMSIG00000007596 Fgf12 (ENSMSIG00000007454) #33 Mb21d2 (ENSMSIG00000007424) #34 Plaat1 (ENSMSIG00000007402) #35 Atp13a5 (ENSMSIG00000007166) #36 Atp13a4 (ENSMSIG00000006926) Mouse MODERN SPECIES 7 Kng2 (ENSMUSG00000060459) #7 Kng1 (ENSMUSG00000022875) #7 Eif4a2 (ENSMUSG00000022884) #8 Rfc4 (ENSMUSG00000022881) #9 Adipoq (ENSMUSG00000022878) #10 St6gal1 (ENSMUSG00000022885) #11 Rtp1 (ENSMUSG00000033383) #12 Masp1 (ENSMUSG00000022887) #13 Rtp4 (ENSMUSG00000033355) #14 Sst (ENSMUSG00000004366) #15 Rtp2 (ENSMUSG00000047531) #16 Bcl6 (ENSMUSG00000022508) #18 Gm37419 (ENSMUSG00000110291) #17 Lpp (ENSMUSG00000033306) #20 Tprg (ENSMUSG00000048399) #21 Trp63 (ENSMUSG00000022510) #22 P3h2 (ENSMUSG00000038168) #23 Cldn1 (ENSMUSG00000022512) #24 Cldn16 (ENSMUSG00000038148) #25 Tmem207 (ENSMUSG00000091972) #26 Il1rap (ENSMUSG00000022514) #27 Gmnc (ENSMUSG00000068428) #28 Ostn (ENSMUSG00000052276) #29 Uts2b (ENSMUSG00000056423) #30 Ccdc50 (ENSMUSG00000038127) #31 Fgf12 (ENSMUSG00000022523) #33 Mb21d2 (ENSMUSG00000051065) #34 Plaat1 (ENSMUSG00000022525) #35 Atp13a5 (ENSMUSG00000048939) #36 Atp13a4 (ENSMUSG00000038094) Opa1 (ENSMUSG00000038084) Ryukyu mouse MODERN SPECIES 7 Hrg (MGP_CAROLIEiJ_G0020610) ##7 MGP_CAROLIEiJ_G0020611 #7 MGP_CAROLIEiJ_G0020612 ##8 Rfc4 (MGP_CAROLIEiJ_G0020613) #9 Adipoq (MGP_CAROLIEiJ_G0020614) #10 MGP_CAROLIEiJ_G0020615 St6gal1 (MGP_CAROLIEiJ_G0020616) #11 Rtp1 (MGP_CAROLIEiJ_G0020617) #12 MGP_CAROLIEiJ_G0020618 #13 MGP_CAROLIEiJ_G0020619 #14 Sst (MGP_CAROLIEiJ_G0020620) #15 Rtp2 (MGP_CAROLIEiJ_G0020621) #16 Bcl6 (MGP_CAROLIEiJ_G0020622) #18 Lpp (MGP_CAROLIEiJ_G0020623) #20 Tprg (MGP_CAROLIEiJ_G0020624) #21 Trp63 (MGP_CAROLIEiJ_G0020625) #22 P3h2 (MGP_CAROLIEiJ_G0020626) #23 Cldn1 (MGP_CAROLIEiJ_G0020627) #24 Cldn16 (MGP_CAROLIEiJ_G0020628) #25 Tmem207 (MGP_CAROLIEiJ_G0020629) #26 Il1rap (MGP_CAROLIEiJ_G0020630) #27 Gmnc (MGP_CAROLIEiJ_G0020631) #28 Ostn (MGP_CAROLIEiJ_G0020632) #29 MGP_CAROLIEiJ_G0020633 #30 MGP_CAROLIEiJ_G0020634 #31 Fgf12 (MGP_CAROLIEiJ_G0020635) #33 Mb21d2 (MGP_CAROLIEiJ_G0020636) #34 Plaat1 (MGP_CAROLIEiJ_G0020637) #35 Atp13a5 (MGP_CAROLIEiJ_G0020638) #36 Atp13a4 (MGP_CAROLIEiJ_G0020639) Opa1 (MGP_CAROLIEiJ_G0020640) Shrew mouse MODERN SPECIES 3 Fetub (MGP_PahariEiJ_G0016313) ##7 Hrg (MGP_PahariEiJ_G0016314) ##7 Eif4a2 (MGP_PahariEiJ_G0016317) #8 MGP_PahariEiJ_G0016318 #9 Adipoq (MGP_PahariEiJ_G0016319) #10 MGP_PahariEiJ_G0016320 St6gal1 (MGP_PahariEiJ_G0016321) #11 Rtp1 (MGP_PahariEiJ_G0016322) #12 MGP_PahariEiJ_G0016323 #13 MGP_PahariEiJ_G0016324 #14 Sst (MGP_PahariEiJ_G0016325) #15 Rtp2 (MGP_PahariEiJ_G0016326) #16 Bcl6 (MGP_PahariEiJ_G0016327) #18 Lpp (MGP_PahariEiJ_G0016328) #20 Tprg (MGP_PahariEiJ_G0016329) #21 Trp63 (MGP_PahariEiJ_G0016330) #22 P3h2 (MGP_PahariEiJ_G0016331) #23 Cldn1 (MGP_PahariEiJ_G0016332) #24 Cldn16 (MGP_PahariEiJ_G0016333) #25 Tmem207 (MGP_PahariEiJ_G0016334) #26 Il1rap (MGP_PahariEiJ_G0016335) #27 Gmnc (MGP_PahariEiJ_G0016336) #28 Ostn (MGP_PahariEiJ_G0016337) #29 Uts2b (MGP_PahariEiJ_G0016338) #30 MGP_PahariEiJ_G0016339 #31 Fgf12 (MGP_PahariEiJ_G0016340) #33 Mb21d2 (MGP_PahariEiJ_G0016341) #34 Plaat1 (MGP_PahariEiJ_G0016342) #35 Atp13a5 (MGP_PahariEiJ_G0016343) #36 Atp13a4 (MGP_PahariEiJ_G0016344) Opa1 (MGP_PahariEiJ_G0016345) Cricetidae ANCESTRAL SPECIES 16 ENSGT00950000182930.A.a ##7 ENSGT00950000182930.B #7 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00900000143836 #17 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Cricetidae_B ANCESTRAL SPECIES 13 ENSGT00950000182930.A.a ##7 ENSGT00950000182930.B #7 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00900000143836 #17 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Northern American deer mouse MODERN SPECIES 3 ENSPEMG00000021494 ##7 ENSPEMG00000009770 #7 ENSPEMG00000021495 #8 Rfc4 (ENSPEMG00000020418) #9 Adipoq (ENSPEMG00000031123) #10 St6gal1 (ENSPEMG00000016299) #11 Rtp1 (ENSPEMG00000014761) #12 Masp1 (ENSPEMG00000011384) #13 ENSPEMG00000025463 Sst (ENSPEMG00000017596) #15 Rtp2 (ENSPEMG00000020551) #16 Bcl6 (ENSPEMG00000020985) #18 Gm37419 (ENSPEMG00000002742) #17 Lpp (ENSPEMG00000011792) #20 Tprg (ENSPEMG00000020656) #21 Trp63 (ENSPEMG00000011679) #22 P3h2 (ENSPEMG00000016547) #23 Cldn1 (ENSPEMG00000025850) #24 Cldn16 (ENSPEMG00000013939) #25 Tmem207 (ENSPEMG00000030277) #26 Il1rap (ENSPEMG00000017318) #27 Gmnc (ENSPEMG00000023220) #28 Ostn (ENSPEMG00000020363) #29 Uts2b (ENSPEMG00000023514) #30 Ccdc50 (ENSPEMG00000020293) #31 ENSPEMG00000025234 Fgf12 (ENSPEMG00000012162) #33 Mb21d2 (ENSPEMG00000013470) #34 Plaat1 (ENSPEMG00000013741) #35 Atp13a5 (ENSPEMG00000015502) #36 Atp13a4 (ENSPEMG00000005881) Prairie vole MODERN SPECIES 7 ENSMOCG00000005648 #7 Eif4a2 (ENSMOCG00000021828) #8 ENSMOCG00000010433 #9 Adipoq (ENSMOCG00000012322) #10 ENSMOCG00000020013 St6gal1 (ENSMOCG00000006409) #11 Rtp1 (ENSMOCG00000015619) #12 Masp1 (ENSMOCG00000013690) #13 ENSMOCG00000014620 #14 Sst (ENSMOCG00000012687) #15 Rtp2 (ENSMOCG00000001704) #16 Bcl6 (ENSMOCG00000002694) #18 Gm37419 (ENSMOCG00000007874) #17 Lpp (ENSMOCG00000002241) #20 Tprg (ENSMOCG00000003239) #21 Trp63 (ENSMOCG00000015252) #22 P3h2 (ENSMOCG00000008061) #23 Cldn1 (ENSMOCG00000012023) #24 Cldn16 (ENSMOCG00000011704) #25 Tmem207 (ENSMOCG00000015831) #26 Il1rap (ENSMOCG00000005743) #27 Gmnc (ENSMOCG00000016556) #28 Ostn (ENSMOCG00000000665) #29 ENSMOCG00000012392 #30 Ccdc50 (ENSMOCG00000021446) #31 Fgf12 (ENSMOCG00000012507) #33 Mb21d2 (ENSMOCG00000010129) #34 Plaat1 (ENSMOCG00000002137) #35 Atp13a5 (ENSMOCG00000013629) #36 Atp13a4 (ENSMOCG00000021525) Opa1 (ENSMOCG00000008528) Cricetinae ANCESTRAL SPECIES 10 ENSGT00950000182930.A.b ##7 ENSGT00950000182930.A.a ##7 ENSGT00950000182930.B #7 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Chinese hamster chok1gshd MODERN SPECIES 382 ENSCGRG00001018793 #7 Eif4a2 (ENSCGRG00001022442) #8 Rfc4 (ENSCGRG00001003704) #9 Adipoq (ENSCGRG00001004804) #10 St6gal1 (ENSCGRG00001012276) #11 ENSCGRG00001012307 Rtp1 (ENSCGRG00001015248) #12 Masp1 (ENSCGRG00001024632) #13 ENSCGRG00001013991 #14 Sst (ENSCGRG00001017689) #15 Rtp2 (ENSCGRG00001023610) #16 Bcl6 (ENSCGRG00001013589) #18 Gm37419 (ENSCGRG00001011798) #17 ENSCGRG00001019717 Tprg (ENSCGRG00001021582) #21 Trp63 (ENSCGRG00001009778) #22 P3h2 (ENSCGRG00001021764) #23 Cldn1 (ENSCGRG00001024994) #24 Cldn16 (ENSCGRG00001002709) #25 Tmem207 (ENSCGRG00001007696) #26 ENSCGRG00001009646 Il1rap (ENSCGRG00001017518) #27 Gmnc (ENSCGRG00001014744) #28 Ostn (ENSCGRG00001021571) #29 Uts2b (ENSCGRG00001017532) #30 Ccdc50 (ENSCGRG00001021357) #31 Fgf12 (ENSCGRG00001012908) #33 Mb21d2 (ENSCGRG00001021085) #34 Plaat1 (ENSCGRG00001000460) #35 Atp13a5 (ENSCGRG00001024264) #36 Atp13a4 (ENSCGRG00001024242) Golden Hamster MODERN SPECIES 645 Ahsg (ENSMAUG00000019960) ##7 Fetub (ENSMAUG00000008221) ##7 Hrg (ENSMAUG00000016556) ##7 ENSMAUG00000003605 #7 Rfc4 (ENSMAUG00000004500) #9 Adipoq (ENSMAUG00000020419) #10 St6gal1 (ENSMAUG00000015040) #11 Rtp1 (ENSMAUG00000021841) #12 Masp1 (ENSMAUG00000009980) #13 ENSMAUG00000008425 #14 Sst (ENSMAUG00000016983) #15 Gm37419 (ENSMAUG00000009832) #17 Bcl6 (ENSMAUG00000010580) #18 Lpp (ENSMAUG00000015219) #20 Tprg (ENSMAUG00000014159) #21 Trp63 (ENSMAUG00000008602) #22 P3h2 (ENSMAUG00000004803) #23 ENSMAUG00000005611 Cldn16 (ENSMAUG00000010011) #25 Tmem207 (ENSMAUG00000018884) #26 Il1rap (ENSMAUG00000021310) #27 Gmnc (ENSMAUG00000010906) #28 Ostn (ENSMAUG00000015065) #29 Uts2b (ENSMAUG00000014754) #30 Ccdc50 (ENSMAUG00000009454) #31 Fgf12 (ENSMAUG00000009873) #33 Mb21d2 (ENSMAUG00000015222) #34 Plaat1 (ENSMAUG00000009846) #35 Atp13a5 (ENSMAUG00000005310) #36 ENSMAUG00000014783 ENSMAUG00000013061 Upper Galilee mountains blind mole rat MODERN SPECIES 1073 ENSNGAG00000010532 #18 Lpp (ENSNGAG00000020023) #20 Tprg (ENSNGAG00000018094) #21 Trp63 (ENSNGAG00000019130) #22 P3h2 (ENSNGAG00000000626) #23 Cldn1 (ENSNGAG00000011403) #24 Cldn16 (ENSNGAG00000022077) #25 Tmem207 (ENSNGAG00000024223) #26 Il1rap (ENSNGAG00000021840) #27 Gmnc (ENSNGAG00000019785) #28 Ostn (ENSNGAG00000013923) #29 Ccdc50 (ENSNGAG00000017549) #31 Lesser Egyptian jerboa MODERN SPECIES 54 Fetub (ENSJJAG00000016431) ##7 Hrg (ENSJJAG00000017501) ##7 ENSJJAG00000013534 #7 Eif4a2 (ENSJJAG00000021948) #8 Rfc4 (ENSJJAG00000013310) #9 Adipoq (ENSJJAG00000012829) #10 St6gal1 (ENSJJAG00000011080) #11 Rtp1 (ENSJJAG00000006636) #12 Masp1 (ENSJJAG00000001597) #13 Sst (ENSJJAG00000011116) #15 ENSJJAG00000013069 #16 Bcl6 (ENSJJAG00000017558) #18 Lpp (ENSJJAG00000005575) #20 Tprg (ENSJJAG00000010735) #21 ENSJJAG00000008682 Trp63 (ENSJJAG00000024331) #22 P3h2 (ENSJJAG00000013941) #23 Cldn1 (ENSJJAG00000005290) #24 Cldn16 (ENSJJAG00000011916) #25 Tmem207 (ENSJJAG00000019213) #26 Il1rap (ENSJJAG00000023480) #27 Gmnc (ENSJJAG00000005924) #28 ENSJJAG00000014895 ENSJJAG00000016353 Ostn (ENSJJAG00000011935) #29 Uts2b (ENSJJAG00000009999) #30 Ccdc50 (ENSJJAG00000013724) #31 Fgf12 (ENSJJAG00000010829) #33 ENSJJAG00000022315 #34 Plaat1 (ENSJJAG00000020429) #35 Atp13a5 (ENSJJAG00000000516) #36 Kangaroo rat MODERN SPECIES 364 Rtp2 (ENSDORG00000005606) #16 Bcl6 (ENSDORG00000005608) #18 Lpp (ENSDORG00000009250) #20 Tprg (ENSDORG00000007733) #21 Trp63 (ENSDORG00000002061) #22 P3h2 (ENSDORG00000001518) #23 Cldn1 (ENSDORG00000029833) #24 Cldn16 (ENSDORG00000008134) #25 Tmem207 (ENSDORG00000024124) #26 Il1rap (ENSDORG00000014736) #27 Gmnc (ENSDORG00000002326) #28 Ostn (ENSDORG00000008337) #29 ENSDORG00000006097 #30 ENSDORG00000029288 #31 Fgf12 (ENSDORG00000004553) #33 Mb21d2 (ENSDORG00000029028) #34 Plaat1 (ENSDORG00000009577) #35 Atp13a5 (ENSDORG00000009578) #36 Atp13a4 (ENSDORG00000005640) Opa1 (ENSDORG00000014872) Rodentia_A ANCESTRAL SPECIES 5 ENSGT00940000153783.b.b.c.a.a.a ##8 ENSGT00940000153783.b.b.c.b ##8 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00970000194716 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Hystricomorpha ANCESTRAL SPECIES 6 ENSGT00950000182930.A.b ##7 ENSGT00950000182930.A.a ##7 ENSGT00950000182930.B #7 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00900000143836 #17 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Hystricomorpha_a ANCESTRAL SPECIES 4 ENSGT00950000182930.A.b ##7 ENSGT00950000182930.A.a ##7 ENSGT00950000182930.B #7 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT01100000266402 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 ENSGT00940000159619.a Guinea pig MODERN SPECIES 7 FETUB (ENSCPOG00000011207) ##7 HRG (ENSCPOG00000025939) ##7 KNG1 (ENSCPOG00000012757) #7 ENSCPOG00000011183 #8 RFC4 (ENSCPOG00000011191) #9 ADIPOQ (ENSCPOG00000036737) #10 ST6GAL1 (ENSCPOG00000001200) #11 RTP1 (ENSCPOG00000001203) #12 MASP1 (ENSCPOG00000015723) #13 SST (ENSCPOG00000009662) #15 RTP2 (ENSCPOG00000009665) #16 BCL6 (ENSCPOG00000004090) #18 ENSCPOG00000033304 LPP (ENSCPOG00000015584) #20 TPRG1 (ENSCPOG00000007437) #21 TP63 (ENSCPOG00000014770) #22 P3H2 (ENSCPOG00000004329) #23 CLDN1 (ENSCPOG00000037018) #24 CLDN16 (ENSCPOG00000008643) #25 IL1RAP (ENSCPOG00000008554) #27 GMNC (ENSCPOG00000019517) #28 OSTN (ENSCPOG00000024963) #29 CCDC50 (ENSCPOG00000013365) #31 FGF12 (ENSCPOG00000038518) #33 MB21D2 (ENSCPOG00000011028) #34 PLAAT1 (ENSCPOG00000008871) #35 ATP13A5 (ENSCPOG00000008873) #36 ATP13A4 (ENSCPOG00000008886) OPA1 (ENSCPOG00000005925) HES1 (ENSCPOG00000036195) CPN2 (ENSCPOG00000037149) Hystricomorpha_b ANCESTRAL SPECIES 9 ENSGT00950000182930.A.b ##7 ENSGT00950000182930.A.a ##7 ENSGT00950000182930.B #7 ENSGT00940000153783.b.b.c.a.b #8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT01100000266402 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 ENSGT00940000159619.a Degu MODERN SPECIES 169 DNAJB11 (ENSODEG00000001870) AHSG (ENSODEG00000001885) ##7 HRG (ENSODEG00000001904) ##7 KNG1 (ENSODEG00000001927) #7 RFC4 (ENSODEG00000001999) #9 ADIPOQ (ENSODEG00000002012) #10 ST6GAL1 (ENSODEG00000002040) #11 RTP1 (ENSODEG00000000396) #12 MASP1 (ENSODEG00000000434) #13 ENSODEG00000000479 SST (ENSODEG00000000486) #15 RTP2 (ENSODEG00000000495) #16 BCL6 (ENSODEG00000000516) #18 LPP (ENSODEG00000000601) #20 TPRG1 (ENSODEG00000000645) #21 TP63 (ENSODEG00000000698) #22 P3H2 (ENSODEG00000000751) #23 CLDN1 (ENSODEG00000000775) #24 CLDN16 (ENSODEG00000000787) #25 TMEM207 (ENSODEG00000000814) #26 IL1RAP (ENSODEG00000000880) #27 ENSODEG00000000947 GMNC (ENSODEG00000000968) #28 OSTN (ENSODEG00000000984) #29 CCDC50 (ENSODEG00000001028) #31 ENSODEG00000018632 FGF12 (ENSODEG00000000898) #33 ENSODEG00000000915 #34 PLAAT1 (ENSODEG00000000928) #35 ATP13A5 (ENSODEG00000000942) #36 Long-tailed chinchilla MODERN SPECIES 127 FETUB (ENSCLAG00000015483) ##7 HRG (ENSCLAG00000015542) ##7 ENSCLAG00000017074 #7 EIF4A2 (ENSCLAG00000014891) #8 RFC4 (ENSCLAG00000014582) #9 ADIPOQ (ENSCLAG00000016452) #10 ST6GAL1 (ENSCLAG00000015941) #11 RTP1 (ENSCLAG00000013765) #12 MASP1 (ENSCLAG00000012518) #13 SST (ENSCLAG00000015832) #15 RTP2 (ENSCLAG00000014964) #16 ENSCLAG00000017951 BCL6 (ENSCLAG00000012339) #18 LPP (ENSCLAG00000015949) #20 TPRG1 (ENSCLAG00000013300) #21 TP63 (ENSCLAG00000012538) #22 P3H2 (ENSCLAG00000012801) #23 CLDN1 (ENSCLAG00000013178) #24 CLDN16 (ENSCLAG00000012605) #25 IL1RAP (ENSCLAG00000012363) #27 GMNC (ENSCLAG00000011473) #28 OSTN (ENSCLAG00000013977) #29 CCDC50 (ENSCLAG00000014114) #31 FGF12 (ENSCLAG00000011409) #33 MB21D2 (ENSCLAG00000014657) #34 PLAAT1 (ENSCLAG00000012403) #35 ATP13A5 (ENSCLAG00000012908) #36 ATP13A4 (ENSCLAG00000012524) OPA1 (ENSCLAG00000012734) HES1 (ENSCLAG00000015321) CPN2 (ENSCLAG00000018106) Naked mole-rat female MODERN SPECIES 27 ST6GAL1 (ENSHGLG00000037893) #11 ENSHGLG00000036874 RTP1 (ENSHGLG00000013919) #12 MASP1 (ENSHGLG00000013470) #13 ENSHGLG00000048542 ENSHGLG00000046703 #14 ENSHGLG00000012948 #14 SST (ENSHGLG00000019161) #15 RTP2 (ENSHGLG00000016449) #16 BCL6 (ENSHGLG00000016440) #18 ENSHGLG00000021340 #17 LPP (ENSHGLG00000016385) #20 ENSHGLG00000036742 ENSHGLG00000042236 ENSHGLG00000039972 #21 TP63 (ENSHGLG00000016277) #22 P3H2 (ENSHGLG00000019175) #23 CLDN1 (ENSHGLG00000038289) #24 CLDN16 (ENSHGLG00000018130) #25 ENSHGLG00000035223 TMEM207 (ENSHGLG00000037564) #26 IL1RAP (ENSHGLG00000018108) #27 ENSHGLG00000036963 #27 ENSHGLG00000019218 GMNC (ENSHGLG00000017131) #28 ENSHGLG00000040250 ENSHGLG00000016933 ENSHGLG00000016923 OSTN (ENSHGLG00000039251) #29 ENSHGLG00000042558 #30 CCDC50 (ENSHGLG00000016906) #31 Sciuridae ANCESTRAL SPECIES 12 ENSGT00950000182930.B #7 ENSGT00860000135739 ENSGT00940000153783.b.b.c.a.a.a ##8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00970000194716 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Marmotini ANCESTRAL SPECIES 57 ENSGT00950000182930.B #7 ENSGT00860000135739 ENSGT00940000153783.b.b.c.a.a.a.a ##8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00900000143836 #17 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Marmotini_b ANCESTRAL SPECIES 79 ENSGT00950000182930.B #7 ENSGT00860000135739 ENSGT00940000153783.b.b.c.a.a.a.a ##8 ENSGT00550000074917 #9 ENSGT00940000159828 #10 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00900000143836 #17 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 Squirrel MODERN SPECIES 178 FETUB (ENSSTOG00000012584) ##7 HRG (ENSSTOG00000012587) ##7 KNG1 (ENSSTOG00000027812) #7 ENSSTOG00000012601 ##8 ENSSTOG00000012616 #9 ADIPOQ (ENSSTOG00000016020) #10 ST6GAL1 (ENSSTOG00000015751) #11 RTP1 (ENSSTOG00000010261) #12 MASP1 (ENSSTOG00000010265) #13 ENSSTOG00000010275 #14 SST (ENSSTOG00000015070) #15 RTP2 (ENSSTOG00000025837) #16 BCL6 (ENSSTOG00000000843) #18 LPP (ENSSTOG00000004791) #20 TPRG1 (ENSSTOG00000013052) #21 TP63 (ENSSTOG00000013771) #22 P3H2 (ENSSTOG00000006501) #23 CLDN1 (ENSSTOG00000009637) #24 CLDN16 (ENSSTOG00000008723) #25 Arctic ground squirrel MODERN SPECIES 67 ENSUPAG00010001535 EIF4A2 (ENSUPAG00010001415) ##8 RFC4 (ENSUPAG00010001386) #9 ADIPOQ (ENSUPAG00010001377) #10 ST6GAL1 (ENSUPAG00010001354) #11 RTP1 (ENSUPAG00010001348) #12 ENSUPAG00010001334 MASP1 (ENSUPAG00010001243) #13 ENSUPAG00010001238 #14 SST (ENSUPAG00010001221) #15 RTP2 (ENSUPAG00010001211) #16 BCL6 (ENSUPAG00010001190) #18 ENSUPAG00010001184 #17 LPP (ENSUPAG00010001116) #20 TPRG1 (ENSUPAG00010001096) #21 TP63 (ENSUPAG00010000340) #22 P3H2 (ENSUPAG00010000290) #23 CLDN1 (ENSUPAG00010000275) #24 CLDN16 (ENSUPAG00010000249) #25 TMEM207 (ENSUPAG00010000237) #26 IL1RAP (ENSUPAG00010000152) #27 Alpin marmot MODERN SPECIES 65 EIF4A2 (ENSMMMG00000009054) ##8 RFC4 (ENSMMMG00000009263) #9 ADIPOQ (ENSMMMG00000009299) #10 ENSMMMG00000009302 ST6GAL1 (ENSMMMG00000009312) #11 RTP1 (ENSMMMG00000009324) #12 MASP1 (ENSMMMG00000009332) #13 ENSMMMG00000009397 ENSMMMG00000009405 #14 SST (ENSMMMG00000009413) #15 RTP2 (ENSMMMG00000009435) #16 BCL6 (ENSMMMG00000009441) #18 ENSMMMG00000009454 #17 LPP (ENSMMMG00000009476) #20 TPRG1 (ENSMMMG00000009493) #21 TP63 (ENSMMMG00000009524) #22 P3H2 (ENSMMMG00000010050) #23 CLDN1 (ENSMMMG00000010077) #24 CLDN16 (ENSMMMG00000010089) #25 TMEM207 (ENSMMMG00000010116) #26 IL1RAP (ENSMMMG00000010137) #27 GMNC (ENSMMMG00000010205) #28 OSTN (ENSMMMG00000010224) #29 UTS2B (ENSMMMG00000010236) #30 CCDC50 (ENSMMMG00000010258) #31 ENSMMMG00000010324 #33 ENSMMMG00000010336 #33 MB21D2 (ENSMMMG00000010348) #34 PLAAT1 (ENSMMMG00000010364) #35 ATP13A5 (ENSMMMG00000010381) #36 ATP13A4 (ENSMMMG00000010493) Eurasian red squirrel MODERN SPECIES 1 ENSSVLG00005008819 ##8 RFC4 (ENSSVLG00005008782) #9 ENSSVLG00005008759 ADIPOQ (ENSSVLG00005008730) #10 ST6GAL1 (ENSSVLG00005008652) #11 RTP1 (ENSSVLG00005008628) #12 MASP1 (ENSSVLG00005008564) #13 ENSSVLG00005008533 #14 SST (ENSSVLG00005008514) #15 RTP2 (ENSSVLG00005008485) #16 ENSSVLG00005008392 #18 ENSSVLG00005008361 LPP (ENSSVLG00005008318) #20 TPRG1 (ENSSVLG00005008266) #21 ENSSVLG00005008233 TP63 (ENSSVLG00005007416) #22 P3H2 (ENSSVLG00005006989) #23 CLDN1 (ENSSVLG00005006941) #24 CLDN16 (ENSSVLG00005006918) #25 TMEM207 (ENSSVLG00005006891) #26 IL1RAP (ENSSVLG00005006739) #27 GMNC (ENSSVLG00005006667) #28 OSTN (ENSSVLG00005006607) #29 UTS2B (ENSSVLG00005006554) #30 ENSSVLG00005006532 CCDC50 (ENSSVLG00005006494) #31 FGF12 (ENSSVLG00005006414) #33 MB21D2 (ENSSVLG00005006368) #34 ENSSVLG00005006347 PLAAT1 (ENSSVLG00005006328) #35 ATP13A5 (ENSSVLG00005006143) #36 Lagomorpha ANCESTRAL SPECIES 9 ENSGT00940000157053 #11 ENSGT00940000161858 #12 ENSGT00950000183084.b.b #13 ENSGT00940000162610 #14 ENSGT00510000047914.b #15 ENSGT00940000162172 #16 ENSGT00940000156311 #18 ENSGT00970000194716 ENSGT00940000156022.b #20 ENSGT00390000001652.f.b #21 ENSGT00950000183153.c.b.a.a #22 ENSGT00940000159593 #23 ENSGT00940000155387 #24 ENSGT00730000111162 #25 ENSGT00390000006126 #26 ENSGT01090000260076.a #27 ENSGT00940000153270.b.b #28 ENSGT00390000001750 #29 ENSGT00390000003511 #30 ENSGT00390000011058.b #31 ENSGT00940000155929 #33 ENSGT01050000244976.b.a #34 ENSGT00940000156634 #35 ENSGT00940000160327 #36 ENSGT00940000159448 ENSGT00550000074851 Rabbit MODERN SPECIES 5 MCF2L2 (ENSOCUG00000008674) B3GNT5 (ENSOCUG00000008691) ADIPOQ (ENSOCUG00000026268) #10 ENSOCUG00000032488 ST6GAL1 (ENSOCUG00000027209) #11 RTP1 (ENSOCUG00000000046) #12 MASP1 (ENSOCUG00000000049) #13 ENSOCUG00000007680 #14 SST (ENSOCUG00000007564) #15 RTP2 (ENSOCUG00000005426) #16 BCL6 (ENSOCUG00000005429) #18 ENSOCUG00000030680 LPP (ENSOCUG00000011764) #20 TPRG1 (ENSOCUG00000015959) #21 ENSOCUG00000038822 TP63 (ENSOCUG00000016465) #22 P3H2 (ENSOCUG00000011014) #23 CLDN1 (ENSOCUG00000011464) #24 CLDN16 (ENSOCUG00000011471) #25 TMEM207 (ENSOCUG00000029314) #26 IL1RAP (ENSOCUG00000004870) #27 GMNC (ENSOCUG00000009539) #28 OSTN (ENSOCUG00000007035) #29 UTS2B (ENSOCUG00000007038) #30 ENSOCUG00000013247 ENSOCUG00000035755 #32 CCDC50 (ENSOCUG00000012695) #31 ENSOCUG00000026253 FGF12 (ENSOCUG00000007581) #33 MB21D2 (ENSOCUG00000015208) #34 ENSOCUG00000039155 Pika MODERN SPECIES 3378 TP63 (ENSOPRG00000002855) #22 Tree shrew MODERN SPECIES 3956 TP63 (ENSTBEG00000004215) #22 P3H2 (ENSTBEG00000004997) #23