Sciuridae	ANCESTRAL SPECIES	35	ENSGT00950000183121.b.b.b.a #7	ENSGT00530000063666.a #8	ENSGT00940000163888.n ##10	ENSGT00390000003732	ENSGT00940000163848	ENSGT01000000216433	ENSGT00390000008591 #12	ENSGT00940000159242 #13	ENSGT00730000111075.b #14	ENSGT00940000161429 #15	ENSGT00940000164351 #17	ENSGT00390000011425.A #18	ENSGT00940000165353 #19	ENSGT00940000156017 #20	ENSGT00730000111570	ENSGT00950000183107.a.b.b #22	ENSGT00940000162488 #24	ENSGT00950000182832.D.b	ENSGT00940000161206 #27	ENSGT00950000183115.b.b #28	ENSGT01030000234518.D #29	ENSGT01100000263536.A.a.a.a #30	ENSGT01100000263536.A.a.a.b #31	ENSGT01040000240444.A.a.a.a.b #33	ENSGT00940000163808 #34	ENSGT01050000245003 #35	ENSGT01100000263536.B.c.b #37	ENSGT00940000163592	ENSGT00940000161697	ENSGT00390000008820.e.b	ENSGT00940000163576
Eurasian red squirrel	MODERN SPECIES	156	ENSSVLG00005024204 #7	APOOL (ENSSVLG00005024251) #8	ENSSVLG00005024287 #9	ENSSVLG00005024295 #10	ENSSVLG00005024315 #11	HDX (ENSSVLG00005024346) #12	RPS6KA6 (ENSSVLG00005024442) #13	CYLC1 (ENSSVLG00005024602) #14	POU3F4 (ENSSVLG00005024640) #15	ENSSVLG00005024677 #16	ENSSVLG00005010323 #17	ENSSVLG00005010356 #18	ENSSVLG00005010369 #19	SH3BGRL (ENSSVLG00005010419) #20	ENSSVLG00005010444 #21	BRWD3 (ENSSVLG00005010574) #22	ENSSVLG00005010912 #23	TENT5D (ENSSVLG00005010945) #24	ENSSVLG00005010961 #25	ENSSVLG00005010993 #26	TBX22 (ENSSVLG00005011035) #27	ITM2A (ENSSVLG00005011136) #28	GPR174 (ENSSVLG00005011269) #29	ENSSVLG00005011291 #30	P2RY10 (ENSSVLG00005011313) #31	ENSSVLG00005011328 #32	LPAR4 (ENSSVLG00005011359) #33	RTL3 (ENSSVLG00005011379) #34	ENSSVLG00005011426 #35	ENSSVLG00005011444 #36	CYSLTR1 (ENSSVLG00005011474) #37
Marmotini	ANCESTRAL SPECIES	78	ENSGT00950000183121.b.b.b.a #7	ENSGT00530000063666.a #8	ENSGT00530000067269	ENSGT00940000163888.m #10	ENSGT00940000163888.n ##10	ENSGT00390000002792.cb #11	ENSGT00390000008591 #12	ENSGT00940000159242 #13	ENSGT00730000111075.b #14	ENSGT00940000161429 #15	ENSGT00940000164351 #17	ENSGT00390000011425.A #18	ENSGT00940000165353 #19	ENSGT00940000156017 #20	ENSGT00730000111570	ENSGT00950000183107.a.b.b #22	ENSGT00940000162488 #24	ENSGT00950000182832.D.b	ENSGT00940000161206 #27	ENSGT00950000183115.b.b #28	ENSGT01030000234518.D #29	ENSGT01100000263536.A.a.a.a #30	ENSGT01100000263536.A.a.a.b #31	ENSGT01040000240444.A.a.a.a.b #33	ENSGT00940000163808 #34	ENSGT01050000245003 #35	ENSGT01100000263536.B.c.b #37	ENSGT00940000163592	ENSGT00940000161697	ENSGT00390000008820.e.b
Marmotini_b	ANCESTRAL SPECIES	121	ENSGT00940000159611	ENSGT00520000059318	ENSGT00950000183121.b.b.b.a #7	ENSGT00530000063666.a #8	ENSGT00940000163888.n ##10	ENSGT00390000002792.cb #11	ENSGT01000000216433	ENSGT00390000008591 #12	ENSGT00940000159242 #13	ENSGT00940000161429 #15	ENSGT00940000164351 #17	ENSGT00390000011425.A #18	ENSGT00940000165353 #19	ENSGT00940000156017 #20	ENSGT00730000111570	ENSGT00950000183107.a.b.b #22	ENSGT00390000015930.e.b	ENSGT00940000162488 #24	ENSGT00940000166733	ENSGT00940000161206 #27	ENSGT00950000183115.b.b #28	ENSGT01030000234518.D #29	ENSGT01100000263536.A.a.a.a #30	ENSGT01100000263536.A.a.a.b #31	ENSGT01040000240444.A.a.a.a.b #33	ENSGT00940000163808 #34	ENSGT01050000245003 #35	ENSGT01100000263536.B.c.b #37	ENSGT00390000016617.j	ENSGT00940000163592	ENSGT00940000161697
Arctic ground squirrel	MODERN SPECIES	623											ENSUPAG00010011017 #17	ENSUPAG00010011011 #18	ENSUPAG00010011003 #19	SH3BGRL (ENSUPAG00010010996) #20	ENSUPAG00010010988	BRWD3 (ENSUPAG00010010937) #22
Squirrel	MODERN SPECIES	147	DACH2 (ENSSTOG00000006685)	CHM (ENSSTOG00000022111)	POF1B (ENSSTOG00000011717)	ZNF711 (ENSSTOG00000008918)	ENSSTOG00000029673	APOOL (ENSSTOG00000005067) #8	ENSSTOG00000023046	ENSSTOG00000027226 #10	ENSSTOG00000033550	HDX (ENSSTOG00000015440) #12	RPS6KA6 (ENSSTOG00000002290) #13	POU3F4 (ENSSTOG00000026467) #15	ENSSTOG00000026305 #19	SH3BGRL (ENSSTOG00000013216) #20	ENSSTOG00000030741	BRWD3 (ENSSTOG00000004508) #22	ENSSTOG00000032417	TENT5D (ENSSTOG00000000603) #24	ENSSTOG00000031325	TBX22 (ENSSTOG00000003725) #27	ENSSTOG00000034456	ITM2A (ENSSTOG00000010140) #28	GPR174 (ENSSTOG00000010269) #29	P2RY10 (ENSSTOG00000000139) #31	LPAR4 (ENSSTOG00000014696) #33	RTL3 (ENSSTOG00000027152) #34	ENSSTOG00000029872	ENSSTOG00000021890	ENSSTOG00000003354	TAF9B (ENSSTOG00000001982)	PGK1 (ENSSTOG00000001972)