Chordata ANCESTRAL SPECIES ENSGT00950000183107 #22 Vertebrata DUPLICATION Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00950000183107.a.b #22 Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES 1 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00990000205517 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097 ENSGT01050000244937.a.b.a ENSGT00940000159971 ENSGT00940000160039 ENSGT00940000157557 Euteleostomi ANCESTRAL SPECIES 58 ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097 Sarcopterygii ANCESTRAL SPECIES 112 ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097 Tetrapoda ANCESTRAL SPECIES 20 ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097 ENSGT01050000244937.a.b.a ENSGT00940000159971 ENSGT00940000160039 Amniota ANCESTRAL SPECIES 24 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097 ENSGT01050000244937.a.b.a ENSGT00940000159971 ENSGT00940000160039 Mammalia ANCESTRAL SPECIES 44 ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097 ENSGT01050000244937.a.b.a ENSGT00940000159971 ENSGT00940000160039 ENSGT00950000183097.a.a.a Theria ANCESTRAL SPECIES 33 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075 #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097 ENSGT00950000183593 ENSGT00940000159568 ENSGT00390000012178 Eutheria ANCESTRAL SPECIES 16 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 ENSGT00940000159568 Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 Euarchontoglires ANCESTRAL SPECIES 11 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b Glires ANCESTRAL SPECIES 10 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b Rodentia ANCESTRAL SPECIES 10 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT01000000216433 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b Rodentia_B ANCESTRAL SPECIES 16 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT01000000216433 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00950000185117 ENSGT00940000166733 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 Myomorpha ANCESTRAL SPECIES 6 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT01000000216433 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00950000185117 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 ENSGT00940000159568 Muroidea ANCESTRAL SPECIES 50 ENSGT00950000183107.a.b.b #22 ENSGT00950000185117 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 ENSGT00940000159568 Muroidea_A ANCESTRAL SPECIES 7 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00940000163888 ENSGT00390000003732 ENSGT00940000163848 ENSGT01000000216433 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00950000182962.b.b.a #23 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 Murinae ANCESTRAL SPECIES 14 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00940000163888 ENSGT00390000003732 ENSGT00940000163848 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00950000182962.b.b.a #23 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 Mus ANCESTRAL SPECIES 9 ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00950000182962.b.b.a #23 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592.c #35 ENSGT00940000161697 #37 Mus_A ANCESTRAL SPECIES 15 ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00950000182962.b.b.a #23 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592.c #35 ENSGT00940000161697 #37 Mus_B ANCESTRAL SPECIES 14 ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00950000182962.b.b.a #23 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592.c #35 ENSGT00940000161697 #37 Mouse MODERN SPECIES 37 Pof1b (ENSMUSG00000034607) #7 Zfp711 (ENSMUSG00000025529) #8 2010106E10Rik (ENSMUSG00000025528) #9 Satl1 (ENSMUSG00000025527) #10 Apool (ENSMUSG00000025525) #11 4933403O08Rik (ENSMUSG00000079460) #12 Tex16 (ENSMUSG00000034555) #13 Gm45194 (ENSMUSG00000109156) #14 Hdx (ENSMUSG00000034551) #15 Rps6ka6 (ENSMUSG00000025665) #16 Cylc1 (ENSMUSG00000073001) #17 Pou3f4 (ENSMUSG00000056854) #18 Gm6377 (ENSMUSG00000048621) #19 Sh3bgrl (ENSMUSG00000031246) #20 Hmgn5 (ENSMUSG00000031245) #21 Brwd3 (ENSMUSG00000063663) #22 Wmp (ENSMUSG00000073006) #23 Tent5d (ENSMUSG00000073007) #24 Chmp1b2 (ENSMUSG00000031242) #25 Tbx22 (ENSMUSG00000031241) #26 Itm2a (ENSMUSG00000031239) #27 Gpr174 (ENSMUSG00000073008) #28 P2ry10b (ENSMUSG00000054293) #29 P2ry10 (ENSMUSG00000050921) #30 Lpar4 (ENSMUSG00000049929) #31 Rtl3 (ENSMUSG00000047686) #32 Gm5127 (ENSMUSG00000073010) #33 Cysltr1 (ENSMUSG00000052821) #34 Fndc3c1 (ENSMUSG00000033737) #35 Fnd3c2 (ENSMUSG00000073012) #36 Taf9b (ENSMUSG00000047242) #37 Mus_C ANCESTRAL SPECIES 22 ENSGT00390000001134.b ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00950000182962.b.b.a #23 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697 #37 ENSGT00390000008820.e.b Steppe mouse MODERN SPECIES 2495 ENSMSIG00000029372 #22 ENSMSIG00000029355 spretus MODERN SPECIES 19 Pof1b (MGP_SPRETEiJ_G0034524) #7 Zfp711 (MGP_SPRETEiJ_G0034523) #8 2010106E10Rik (MGP_SPRETEiJ_G0034522) #9 Satl1 (MGP_SPRETEiJ_G0034521) #10 Apool (MGP_SPRETEiJ_G0034520) #11 4933403O08Rik (MGP_SPRETEiJ_G0034519) #12 Hdx (MGP_SPRETEiJ_G0034517) #15 MGP_SPRETEiJ_G0034516 Rps6ka6 (MGP_SPRETEiJ_G0034515) #16 MGP_SPRETEiJ_G0034514 Cylc1 (MGP_SPRETEiJ_G0034513) #17 Pou3f4 (MGP_SPRETEiJ_G0034512) #18 Gm6377 (MGP_SPRETEiJ_G0034511) #19 Sh3bgrl (MGP_SPRETEiJ_G0034510) #20 MGP_SPRETEiJ_G0034509 #21 MGP_SPRETEiJ_G0034508 #22 MGP_SPRETEiJ_G0034507 MGP_SPRETEiJ_G0034506 #23 Tent5d (MGP_SPRETEiJ_G0034505) #24 Chmp1b2 (MGP_SPRETEiJ_G0034504) #25 Tbx22 (MGP_SPRETEiJ_G0034503) #26 Itm2a (MGP_SPRETEiJ_G0034502) #27 Gpr174 (MGP_SPRETEiJ_G0034501) #28 P2ry10b (MGP_SPRETEiJ_G0034500) #29 P2ry10 (MGP_SPRETEiJ_G0034499) #30 Lpar4 (MGP_SPRETEiJ_G0034498) #31 Rtl3 (MGP_SPRETEiJ_G0034497) #32 Gm5127 (MGP_SPRETEiJ_G0034496) #33 Cysltr1 (MGP_SPRETEiJ_G0034495) #34 Taf9b (MGP_SPRETEiJ_G0034493) #37 Pgk1 (MGP_SPRETEiJ_G0034492) Ryukyu mouse MODERN SPECIES 19 Chm (MGP_CAROLIEiJ_G0033359) Pof1b (MGP_CAROLIEiJ_G0033358) #7 Zfp711 (MGP_CAROLIEiJ_G0033357) #8 2010106E10Rik (MGP_CAROLIEiJ_G0033356) #9 Satl1 (MGP_CAROLIEiJ_G0033355) #10 Apool (MGP_CAROLIEiJ_G0033354) #11 4933403O08Rik (MGP_CAROLIEiJ_G0033353) #12 MGP_CAROLIEiJ_G0033352 #13 Hdx (MGP_CAROLIEiJ_G0033351) #15 Rps6ka6 (MGP_CAROLIEiJ_G0033350) #16 Cylc1 (MGP_CAROLIEiJ_G0033349) #17 Pou3f4 (MGP_CAROLIEiJ_G0033348) #18 Gm6377 (MGP_CAROLIEiJ_G0033347) #19 Sh3bgrl (MGP_CAROLIEiJ_G0033346) #20 MGP_CAROLIEiJ_G0033345 #21 Brwd3 (MGP_CAROLIEiJ_G0033344) #22 MGP_CAROLIEiJ_G0033343 Wmp (MGP_CAROLIEiJ_G0033342) #23 Tent5d (MGP_CAROLIEiJ_G0033341) #24 Chmp1b2 (MGP_CAROLIEiJ_G0033340) #25 Tbx22 (MGP_CAROLIEiJ_G0033339) #26 Itm2a (MGP_CAROLIEiJ_G0033338) #27 Gpr174 (MGP_CAROLIEiJ_G0033337) #28 P2ry10b (MGP_CAROLIEiJ_G0033336) #29 P2ry10 (MGP_CAROLIEiJ_G0033335) #30 Lpar4 (MGP_CAROLIEiJ_G0033334) #31 Rtl3 (MGP_CAROLIEiJ_G0033333) #32 Gm5127 (MGP_CAROLIEiJ_G0033332) #33 Cysltr1 (MGP_CAROLIEiJ_G0033331) #34 Fndc3c1 (MGP_CAROLIEiJ_G0033330) #35 Taf9b (MGP_CAROLIEiJ_G0033329) #37 Shrew mouse MODERN SPECIES 23 Satl1 (MGP_PahariEiJ_G0031895) #10 Apool (MGP_PahariEiJ_G0031894) #11 4933403O08Rik (MGP_PahariEiJ_G0031893) #12 MGP_PahariEiJ_G0031892 #13 Hdx (MGP_PahariEiJ_G0031891) #15 Rps6ka6 (MGP_PahariEiJ_G0031890) #16 MGP_PahariEiJ_G0031889 #17 Pou3f4 (MGP_PahariEiJ_G0031888) #18 MGP_PahariEiJ_G0031887 MGP_PahariEiJ_G0031885 MGP_PahariEiJ_G0031886 MGP_PahariEiJ_G0031884 Gm6377 (MGP_PahariEiJ_G0031883) #19 Sh3bgrl (MGP_PahariEiJ_G0031882) #20 Hmgn5 (MGP_PahariEiJ_G0031881) #21 Brwd3 (MGP_PahariEiJ_G0031880) #22 MGP_PahariEiJ_G0031879 Wmp (MGP_PahariEiJ_G0031878) #23 Tent5d (MGP_PahariEiJ_G0031877) #24 Chmp1b2 (MGP_PahariEiJ_G0031876) #25 Tbx22 (MGP_PahariEiJ_G0031875) #26 Itm2a (MGP_PahariEiJ_G0031874) #27 Gpr174 (MGP_PahariEiJ_G0031873) #28 P2ry10b (MGP_PahariEiJ_G0031872) #29 P2ry10 (MGP_PahariEiJ_G0031871) #30 Lpar4 (MGP_PahariEiJ_G0031870) #31 Rtl3 (MGP_PahariEiJ_G0031869) #32 Gm5127 (MGP_PahariEiJ_G0031868) #33 Cysltr1 (MGP_PahariEiJ_G0031867) #34 Fndc3c1 (MGP_PahariEiJ_G0031866) #35 Taf9b (MGP_PahariEiJ_G0031865) #37 Rat MODERN SPECIES 46 Satl1 (ENSRNOG00000022476) #10 Apool (ENSRNOG00000004512) #11 4933403O08Rik (ENSRNOG00000042394) #12 Ube2d4l1 (ENSRNOG00000065297) LOC100363993 (ENSRNOG00000067650) #13 Hdx (ENSRNOG00000037799) #15 Rps6ka6 (ENSRNOG00000002592) #16 Cylc1 (ENSRNOG00000056740) #17 Ankra2 (ENSRNOG00000016622) Pou3f4 (ENSRNOG00000002784) #18 LOC102554937 (ENSRNOG00000068802) LOC681325 (ENSRNOG00000023005) #19 RGD1562039 (ENSRNOG00000030519) Sh3bgrl (ENSRNOG00000069303) #20 Hmgn5 (ENSRNOG00000029078) #21 Brwd3 (ENSRNOG00000002291) #22 LOC103690878 (ENSRNOG00000031283) RGD1562871 (ENSRNOG00000033458) Rfk-ps1 (ENSRNOG00000066048) RGD1561552 (ENSRNOG00000037827) #23 Tent5d (ENSRNOG00000023637) #24 Chmp1b2 (ENSRNOG00000002323) #25 Tbx22 (ENSRNOG00000002346) #26 Itm2a (ENSRNOG00000002365) #27 Gpr174 (ENSRNOG00000032970) #28 P2ry10b (ENSRNOG00000037838) #29 P2ry10 (ENSRNOG00000037839) #30 Lpar4 (ENSRNOG00000002428) #31 Rtl3 (ENSRNOG00000002429) #32 RGD1560821 (ENSRNOG00000023733) LOC100359656 (ENSRNOG00000029090) #33 Cricetidae ANCESTRAL SPECIES 8 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT01000000216433 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00950000182962.b.b.a #23 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 Cricetinae ANCESTRAL SPECIES 17 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00940000163888 ENSGT01000000216433 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT01030000235438 ENSGT00940000161429 #18 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00950000182962.b.b.a #23 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 Chinese hamster chok1gshd MODERN SPECIES 16 ENSCGRG00001000138 #10 ENSCGRG00001000206 #11 4933403O08Rik (ENSCGRG00001018687) #12 ENSCGRG00001007339 Tex16 (ENSCGRG00001020189) #13 Hdx (ENSCGRG00001001736) #15 Rps6ka6 (ENSCGRG00001019587) #16 Cylc1 (ENSCGRG00001014177) #17 ENSCGRG00001016928 Pou3f4 (ENSCGRG00001011962) #18 ENSCGRG00001024450 Gm6377 (ENSCGRG00001012169) #19 ENSCGRG00001011016 Sh3bgrl (ENSCGRG00001000603) #20 Hmgn5 (ENSCGRG00001013973) #21 Brwd3 (ENSCGRG00001016099) #22 ENSCGRG00001004740 Wmp (ENSCGRG00001017986) #23 Tent5d (ENSCGRG00001012351) #24 Chmp1b2 (ENSCGRG00001005877) #25 Tbx22 (ENSCGRG00001019725) #26 ENSCGRG00001000247 Itm2a (ENSCGRG00001008417) #27 Gpr174 (ENSCGRG00001015402) #28 P2ry10b (ENSCGRG00001011228) #29 P2ry10 (ENSCGRG00001007928) #30 Lpar4 (ENSCGRG00001006727) #31 Rtl3 (ENSCGRG00001015952) #32 Gm5127 (ENSCGRG00001007445) #33 Cysltr1 (ENSCGRG00001010323) #34 ENSCGRG00001002344 #35 Golden Hamster MODERN SPECIES 758 Zfp711 (ENSMAUG00000012277) #8 2010106E10Rik (ENSMAUG00000012995) #9 Satl1 (ENSMAUG00000016111) #10 Apool (ENSMAUG00000014048) #11 4933403O08Rik (ENSMAUG00000009376) #12 ENSMAUG00000016626 Tex16 (ENSMAUG00000006556) #13 ENSMAUG00000018096 Hdx (ENSMAUG00000000922) #15 Rps6ka6 (ENSMAUG00000001357) #16 ENSMAUG00000007023 Pou3f4 (ENSMAUG00000016709) #18 ENSMAUG00000010933 ENSMAUG00000008750 Sh3bgrl (ENSMAUG00000000433) #20 Brwd3 (ENSMAUG00000012244) #22 ENSMAUG00000011241 ENSMAUG00000013651 Wmp (ENSMAUG00000016661) #23 Chmp1b2 (ENSMAUG00000011550) #25 Cricetidae_B ANCESTRAL SPECIES 47 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT01000000216433 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00950000182962.b.b.a #23 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b.t.a Northern American deer mouse MODERN SPECIES 475 Pof1b (ENSPEMG00000023660) #7 Zfp711 (ENSPEMG00000028793) #8 2010106E10Rik (ENSPEMG00000015852) #9 ENSPEMG00000026639 #10 Apool (ENSPEMG00000024018) #11 ENSPEMG00000022787 4933403O08Rik (ENSPEMG00000025473) #12 Hdx (ENSPEMG00000011250) #15 Rps6ka6 (ENSPEMG00000015736) #16 Cylc1 (ENSPEMG00000017301) #17 Pou3f4 (ENSPEMG00000003663) #18 ENSPEMG00000025843 Gm6377 (ENSPEMG00000023246) #19 ENSPEMG00000024318 Sh3bgrl (ENSPEMG00000027781) #20 Brwd3 (ENSPEMG00000022305) #22 ENSPEMG00000031328 Wmp (ENSPEMG00000027638) #23 Tent5d (ENSPEMG00000031184) #24 Chmp1b2 (ENSPEMG00000022335) #25 Tbx22 (ENSPEMG00000023383) #26 Itm2a (ENSPEMG00000023946) #27 Gpr174 (ENSPEMG00000005742) #28 ENSPEMG00000004229 P2ry10b (ENSPEMG00000024642) #29 P2ry10 (ENSPEMG00000023462) #30 Lpar4 (ENSPEMG00000030102) #31 Cysltr1 (ENSPEMG00000023120) #34 ENSPEMG00000026887 ENSPEMG00000021468 #35 Taf9b (ENSPEMG00000022582) #37 Prairie vole MODERN SPECIES 96 Pof1b (ENSMOCG00000014928) #7 Zfp711 (ENSMOCG00000003046) #8 2010106E10Rik (ENSMOCG00000017647) #9 Satl1 (ENSMOCG00000003777) #10 Apool (ENSMOCG00000019380) #11 4933403O08Rik (ENSMOCG00000010080) #12 Tex16 (ENSMOCG00000016239) #13 ENSMOCG00000012225 Hdx (ENSMOCG00000016956) #15 Rps6ka6 (ENSMOCG00000000070) #16 Cylc1 (ENSMOCG00000002144) #17 Pou3f4 (ENSMOCG00000001063) #18 ENSMOCG00000001887 Sh3bgrl (ENSMOCG00000002612) #20 ENSMOCG00000001614 #21 Brwd3 (ENSMOCG00000018113) #22 ENSMOCG00000004335 Chmp1b2 (ENSMOCG00000010933) #25 Tbx22 (ENSMOCG00000001712) #26 Itm2a (ENSMOCG00000020928) #27 Gpr174 (ENSMOCG00000022431) #28 Upper Galilee mountains blind mole rat MODERN SPECIES 503 Chm (ENSNGAG00000011917) Pof1b (ENSNGAG00000024266) #7 Zfp711 (ENSNGAG00000015585) #8 Apool (ENSNGAG00000023555) #11 4933403O08Rik (ENSNGAG00000001929) #12 ENSNGAG00000007069 #13 ENSNGAG00000020473 Hdx (ENSNGAG00000022021) #15 Rps6ka6 (ENSNGAG00000013321) #16 Pou3f4 (ENSNGAG00000013024) #18 ENSNGAG00000018747 ENSNGAG00000023856 Sh3bgrl (ENSNGAG00000008553) #20 ENSNGAG00000018332 ENSNGAG00000021355 Brwd3 (ENSNGAG00000021381) #22 ENSNGAG00000024238 Chmp1b2 (ENSNGAG00000023090) #25 Tbx22 (ENSNGAG00000023862) #26 ENSNGAG00000014283 Lesser Egyptian jerboa MODERN SPECIES 173 Dach2 (ENSJJAG00000014515) Chm (ENSJJAG00000012459) Pof1b (ENSJJAG00000010917) #7 Zfp711 (ENSJJAG00000010450) #8 ENSJJAG00000009900 #9 Apool (ENSJJAG00000007396) #11 4933403O08Rik (ENSJJAG00000005323) #12 Hdx (ENSJJAG00000004610) #15 Rps6ka6 (ENSJJAG00000023727) #16 ENSJJAG00000022602 ENSJJAG00000022439 ENSJJAG00000022322 Pou3f4 (ENSJJAG00000012452) #18 ENSJJAG00000022040 ENSJJAG00000021895 #20 Brwd3 (ENSJJAG00000022949) #22 Kangaroo rat MODERN SPECIES 399 ENSDORG00000028193 Klhl4 (ENSDORG00000013698) Dach2 (ENSDORG00000005499) ENSDORG00000029836 Chm (ENSDORG00000011463) ENSDORG00000026546 Pof1b (ENSDORG00000012012) #7 Zfp711 (ENSDORG00000012010) #8 Apool (ENSDORG00000011045) #11 4933403O08Rik (ENSDORG00000027967) #12 ENSDORG00000029968 Hdx (ENSDORG00000012098) #15 Rps6ka6 (ENSDORG00000008579) #16 Pou3f4 (ENSDORG00000006273) #18 Sh3bgrl (ENSDORG00000029190) #20 Brwd3 (ENSDORG00000003314) #22 Rodentia_A ANCESTRAL SPECIES 9 ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 Hystricomorpha ANCESTRAL SPECIES 11 ENSGT00940000162668 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000159568 ENSGT00390000012178.g.a.a ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 Hystricomorpha_a ANCESTRAL SPECIES 51 ENSGT00940000162668 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000183107.a.b.b #22 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000159568 ENSGT00390000012178.g.a.a ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 ENSGT00940000163182 Hystricomorpha_b ANCESTRAL SPECIES 113 ENSGT00940000162668 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000183107.a.b.b #22 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 Long-tailed chinchilla MODERN SPECIES 236 POF1B (ENSCLAG00000001445) #7 ZNF711 (ENSCLAG00000006726) #8 ENSCLAG00000005441 #9 APOOL (ENSCLAG00000005248) #11 HDX (ENSCLAG00000004931) #15 ENSCLAG00000004827 RPS6KA6 (ENSCLAG00000008786) #16 ENSCLAG00000007791 #17 POU3F4 (ENSCLAG00000017671) #18 ENSCLAG00000007431 ENSCLAG00000007047 ENSCLAG00000006755 #19 SH3BGRL (ENSCLAG00000006693) #20 ENSCLAG00000002689 BRWD3 (ENSCLAG00000002311) #22 ENSCLAG00000002120 #25 TBX22 (ENSCLAG00000001961) #26 ENSCLAG00000001888 Degu MODERN SPECIES 144 ENSODEG00000018560 CHM (ENSODEG00000001208) ENSODEG00000001180 POF1B (ENSODEG00000001140) #7 ZNF711 (ENSODEG00000001046) #8 ENSODEG00000001004 #9 ENSODEG00000000990 APOOL (ENSODEG00000000970) #11 ENSODEG00000000866 HDX (ENSODEG00000000832) #15 RPS6KA6 (ENSODEG00000003590) #16 POU3F4 (ENSODEG00000019055) #18 ENSODEG00000003430 ENSODEG00000003422 SH3BGRL (ENSODEG00000003326) #20 BRWD3 (ENSODEG00000003272) #22 ENSODEG00000003179 ENSODEG00000001423 #25 TBX22 (ENSODEG00000001209) #26 ENSODEG00000001116 Guinea pig MODERN SPECIES 26 ENSCPOG00000022352 ENSCPOG00000019816 ENSCPOG00000038470 ENSCPOG00000034813 PABPC5 (ENSCPOG00000002555) ENSCPOG00000006969 ENSCPOG00000038839 KLHL4 (ENSCPOG00000008909) CHM (ENSCPOG00000039732) POF1B (ENSCPOG00000009472) #7 ZNF711 (ENSCPOG00000009467) #8 APOOL (ENSCPOG00000036938) #11 HDX (ENSCPOG00000014501) #15 POU3F4 (ENSCPOG00000003372) #18 SH3BGRL (ENSCPOG00000012267) #20 BRWD3 (ENSCPOG00000009894) #22 ENSCPOG00000026660 #25 GPR174 (ENSCPOG00000013180) #28 P2RY10 (ENSCPOG00000010882) #30 CYSLTR1 (ENSCPOG00000002100) #34 TAF9B (ENSCPOG00000002098) #37 PGK1 (ENSCPOG00000038840) ATP7A (ENSCPOG00000020377) ENSCPOG00000036844 MAGT1 (ENSCPOG00000027554) ATRX (ENSCPOG00000007873) FGF16 (ENSCPOG00000007870) MAGEE1 (ENSCPOG00000039465) PBDC1 (ENSCPOG00000006794) ZDHHC15 (ENSCPOG00000006742) UPRT (ENSCPOG00000035232) Naked mole-rat female MODERN SPECIES 31 APOOL (ENSHGLG00000003635) #11 ENSHGLG00000035970 ENSHGLG00000045926 HDX (ENSHGLG00000003945) #15 RPS6KA6 (ENSHGLG00000004511) #16 ENSHGLG00000037398 ENSHGLG00000040597 ENSHGLG00000050316 #18 ENSHGLG00000050061 ENSHGLG00000005940 ENSHGLG00000020202 ENSHGLG00000020488 ENSHGLG00000007062 ENSHGLG00000007722 #20 ENSHGLG00000037295 BRWD3 (ENSHGLG00000002063) #22 ENSHGLG00000041421 TENT5D (ENSHGLG00000020434) #24 ENSHGLG00000000868 #25 TBX22 (ENSHGLG00000001099) #26 ENSHGLG00000001147 ITM2A (ENSHGLG00000001163) #27 ENSHGLG00000001279 P2RY10 (ENSHGLG00000001264) #29 ENSHGLG00000001881 #30 ENSHGLG00000034411 ENSHGLG00000000659 NOX1 (ENSHGLG00000001560) XKRX (ENSHGLG00000001130) ENSHGLG00000032087 ENSHGLG00000044261 Sciuridae ANCESTRAL SPECIES 35 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000163888.n ENSGT00390000003732 ENSGT00940000163848 ENSGT01000000216433 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 Marmotini ANCESTRAL SPECIES 78 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00940000163888.m ENSGT00940000163888.n ENSGT00390000002792.cb #13 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b Marmotini_b ANCESTRAL SPECIES 121 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000163888.n ENSGT00390000002792.cb #13 ENSGT01000000216433 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00390000015930.e.b ENSGT00940000162488 #24 ENSGT00940000166733 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00390000016617.j ENSGT00940000163592 #35 ENSGT00940000161697 #37 Arctic ground squirrel MODERN SPECIES 623 ENSUPAG00010011017 ENSUPAG00010011011 #19 ENSUPAG00010011003 SH3BGRL (ENSUPAG00010010996) #20 ENSUPAG00010010988 #21 BRWD3 (ENSUPAG00010010937) #22 Squirrel MODERN SPECIES 147 DACH2 (ENSSTOG00000006685) CHM (ENSSTOG00000022111) POF1B (ENSSTOG00000011717) #7 ZNF711 (ENSSTOG00000008918) #8 ENSSTOG00000029673 #9 APOOL (ENSSTOG00000005067) #11 ENSSTOG00000023046 #12 ENSSTOG00000027226 ENSSTOG00000033550 HDX (ENSSTOG00000015440) #15 RPS6KA6 (ENSSTOG00000002290) #16 POU3F4 (ENSSTOG00000026467) #18 ENSSTOG00000026305 SH3BGRL (ENSSTOG00000013216) #20 ENSSTOG00000030741 #21 BRWD3 (ENSSTOG00000004508) #22 ENSSTOG00000032417 TENT5D (ENSSTOG00000000603) #24 ENSSTOG00000031325 TBX22 (ENSSTOG00000003725) #26 ENSSTOG00000034456 ITM2A (ENSSTOG00000010140) #27 GPR174 (ENSSTOG00000010269) #28 P2RY10 (ENSSTOG00000000139) #30 LPAR4 (ENSSTOG00000014696) #31 RTL3 (ENSSTOG00000027152) #32 ENSSTOG00000029872 ENSSTOG00000021890 #35 ENSSTOG00000003354 TAF9B (ENSSTOG00000001982) #37 PGK1 (ENSSTOG00000001972) Eurasian red squirrel MODERN SPECIES 156 ENSSVLG00005024204 #10 APOOL (ENSSVLG00005024251) #11 ENSSVLG00005024287 ENSSVLG00005024295 ENSSVLG00005024315 #13 HDX (ENSSVLG00005024346) #15 RPS6KA6 (ENSSVLG00005024442) #16 CYLC1 (ENSSVLG00005024602) #17 POU3F4 (ENSSVLG00005024640) #18 ENSSVLG00005024677 ENSSVLG00005010323 ENSSVLG00005010356 #19 ENSSVLG00005010369 SH3BGRL (ENSSVLG00005010419) #20 ENSSVLG00005010444 BRWD3 (ENSSVLG00005010574) #22 ENSSVLG00005010912 TENT5D (ENSSVLG00005010945) #24 ENSSVLG00005010961 ENSSVLG00005010993 TBX22 (ENSSVLG00005011035) #26 ITM2A (ENSSVLG00005011136) #27 GPR174 (ENSSVLG00005011269) #28 ENSSVLG00005011291 #29 P2RY10 (ENSSVLG00005011313) #30 ENSSVLG00005011328 LPAR4 (ENSSVLG00005011359) #31 RTL3 (ENSSVLG00005011379) #32 ENSSVLG00005011426 #33 ENSSVLG00005011444 CYSLTR1 (ENSSVLG00005011474) #34 Lagomorpha ANCESTRAL SPECIES 95 ENSGT00950000183121.b.b.b.a #10 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000163888 ENSGT00530000067269 #12 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 ENSGT00940000159568 ENSGT00390000012178.g.a.b.b ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 Rabbit MODERN SPECIES 1401 ENSOCUG00000031808 ENSOCUG00000027774 #12 HDX (ENSOCUG00000000903) #15 ENSOCUG00000006428 #16 CYLC1 (ENSOCUG00000005157) #17 POU3F4 (ENSOCUG00000010927) #18 ENSOCUG00000021892 ENSOCUG00000005222 ENSOCUG00000029757 ENSOCUG00000027690 ENSOCUG00000025499 #19 ENSOCUG00000028103 SH3BGRL (ENSOCUG00000014035) #20 HMGN5 (ENSOCUG00000029345) #21 ENSOCUG00000038725 BRWD3 (ENSOCUG00000005170) #22 ENSOCUG00000026656 ENSOCUG00000031557 ENSOCUG00000022541 ENSOCUG00000021400 TENT5D (ENSOCUG00000001367) #24 ENSOCUG00000024762 TBX22 (ENSOCUG00000013685) #26 ENSOCUG00000033641 ITM2A (ENSOCUG00000008651) #27 GPR174 (ENSOCUG00000005049) #28 ENSOCUG00000024395 #29 P2RY10 (ENSOCUG00000014507) #30 RTL3 (ENSOCUG00000025689) #32 ENSOCUG00000024148 CYSLTR1 (ENSOCUG00000016192) #34 Tree shrew MODERN SPECIES 3312 ENSTBEG00000001219 #22 Primates ANCESTRAL SPECIES 19 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000166733 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 Strepsirrhini ANCESTRAL SPECIES 37 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00940000171348 ENSGT00950000183107.a.b.b #22 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 ENSGT00940000159568 ENSGT00390000012178.g.a.b.a Bushbaby MODERN SPECIES 447 BRWD3 (ENSOGAG00000013597) #22 Lemuriformes ANCESTRAL SPECIES 49 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017.u #20 ENSGT00940000171348 ENSGT00940000156017.t.b #20 ENSGT00950000183107.a.b.b #22 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 ENSGT00940000159568 ENSGT00390000012178.g.a.b.a.a ENSGT00390000012030.b.a ENSGT00940000155902 Lemuriformes_a ANCESTRAL SPECIES 152 ENSGT00940000156017.t.b #20 ENSGT00950000183107.a.b.b #22 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 ENSGT00940000159568 ENSGT00390000012178.g.a.b.a.a ENSGT00390000012030.b.a ENSGT00940000155902 Greater bamboo lemur MODERN SPECIES 915 ENSPSMG00000018905 #22 Coquerels sifaka MODERN SPECIES 971 ENSPCOG00000020173 SH3BGRL (ENSPCOG00000014464) #20 BRWD3 (ENSPCOG00000017411) #22 TBX22 (ENSPCOG00000022867) #26 ITM2A (ENSPCOG00000015645) #27 ENSPCOG00000013558 #29 LPAR4 (ENSPCOG00000010534) #31 RTL3 (ENSPCOG00000016711) #32 TAF9B (ENSPCOG00000008362) #37 PGK1 (ENSPCOG00000027264) ENSPCOG00000018553 ATP7A (ENSPCOG00000023408) ENSPCOG00000019240 MAGT1 (ENSPCOG00000016418) ENSPCOG00000000509 ATRX (ENSPCOG00000019721) FGF16 (ENSPCOG00000004992) ENSPCOG00000023864 Mouse lemur MODERN SPECIES 169 ENSMICG00000005033 #8 ENSMICG00000045126 #10 ENSMICG00000015844 #11 HDX (ENSMICG00000027640) #15 RPS6KA6 (ENSMICG00000006433) #16 CYLC1 (ENSMICG00000010585) #17 POU3F4 (ENSMICG00000017301) #18 ENSMICG00000045268 ENSMICG00000004627 ENSMICG00000027473 ENSMICG00000029900 #8 ENSMICG00000029775 ENSMICG00000027761 ENSMICG00000037235 #20 ENSMICG00000041937 BRWD3 (ENSMICG00000007517) #22 ENSMICG00000007110 TBX22 (ENSMICG00000009019) #26 ITM2A (ENSMICG00000033300) #27 LPAR4 (ENSMICG00000046360) #31 RTL3 (ENSMICG00000004901) #32 ENSMICG00000042846 ENSMICG00000028928 TAF9B (ENSMICG00000037189) #37 PGK1 (ENSMICG00000006916) ENSMICG00000037200 ATP7A (ENSMICG00000011672) MAGT1 (ENSMICG00000015284) ATRX (ENSMICG00000013935) FGF16 (ENSMICG00000004689) ENSMICG00000047222 Haplorrhini ANCESTRAL SPECIES 18 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000166733 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b ENSGT00390000012030.b.a ENSGT00940000155902 Tarsier MODERN SPECIES 6407 BRWD3 (ENSTSYG00000008619) #22 ENSTSYG00000028756 Simiiformes ANCESTRAL SPECIES 9 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.m.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000166733 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697.f #37 ENSGT00390000008820.e.b.a.b ENSGT00390000008820.e.b.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b ENSGT00390000012030.b.a Platyrrhini ANCESTRAL SPECIES 33 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.m.a.e.b #11 ENSGT00530000063666.a.m.a.e.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT01030000235438 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000155436.p ENSGT00850000133588 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697.f #37 ENSGT00390000008820.e.b.a.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 Cebidae ANCESTRAL SPECIES 18 ENSGT00390000003732 ENSGT00390000007879.b ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00530000063666.a.m.a.e.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT01030000235438 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000155436.p ENSGT00850000133588 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697.f #37 ENSGT00390000008820.e.b.a.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 Cebidae_a ANCESTRAL SPECIES 108 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT01030000235438 ENSGT00940000161429 #18 ENSGT00950000183107.a.b.b #22 ENSGT00940000155436.p ENSGT00850000133588 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000161697.f #37 ENSGT00390000008820.e.b.a.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 ENSGT00940000163182 Capuchin MODERN SPECIES 749 HMGN5 (ENSCCAG00000021658) #21 ENSCCAG00000026078 ENSCCAG00000019860 BRWD3 (ENSCCAG00000028800) #22 ENSCCAG00000012903 Bolivian squirrel monkey MODERN SPECIES 129 HDX (ENSSBOG00000031165) #15 RPS6KA6 (ENSSBOG00000020333) #16 ENSSBOG00000023810 POU3F4 (ENSSBOG00000016286) #18 ENSSBOG00000024578 ENSSBOG00000021712 ENSSBOG00000026727 SH3BGRL (ENSSBOG00000023513) #20 ENSSBOG00000023646 ENSSBOG00000022776 BRWD3 (ENSSBOG00000023225) #22 ENSSBOG00000026029 ENSSBOG00000029080 ENSSBOG00000022301 ENSSBOG00000030919 ITM2A (ENSSBOG00000026136) #27 GPR174 (ENSSBOG00000036414) #28 P2RY10 (ENSSBOG00000034403) #30 LPAR4 (ENSSBOG00000019609) #31 ENSSBOG00000026336 ENSSBOG00000027707 TAF9B (ENSSBOG00000013611) #37 PGK1 (ENSSBOG00000027742) ATP7A (ENSSBOG00000022587) ENSSBOG00000027829 #13 COX7B (ENSSBOG00000023896) Marmoset MODERN SPECIES 78 ENSCJAG00000080789 POF1B (ENSCJAG00000010342) #7 ZNF711 (ENSCJAG00000010311) #8 ENSCJAG00000008249 #11 ENSCJAG00000076835 ENSCJAG00000084688 HDX (ENSCJAG00000008295) #15 RPS6KA6 (ENSCJAG00000008317) #16 ENSCJAG00000077909 CYLC1 (ENSCJAG00000069361) #17 POU3F4 (ENSCJAG00000002526) #18 ENSCJAG00000068028 ENSCJAG00000057987 ENSCJAG00000003568 #20 HMGN5 (ENSCJAG00000060139) #21 BRWD3 (ENSCJAG00000019839) #22 ENSCJAG00000078872 TENT5D (ENSCJAG00000038213) #24 ENSCJAG00000031179 TBX22 (ENSCJAG00000009617) #26 ITM2A (ENSCJAG00000009591) #27 GPR174 (ENSCJAG00000009588) #28 ENSCJAG00000085348 P2RY10 (ENSCJAG00000009576) #30 LPAR4 (ENSCJAG00000042770) #31 ENSCJAG00000081982 ENSCJAG00000082269 ENSCJAG00000075214 CYSLTR1 (ENSCJAG00000023257) #34 TAF9B (ENSCJAG00000019520) #37 PGK1 (ENSCJAG00000021082) Mas night monkey MODERN SPECIES 896 SH3BGRL (ENSANAG00000033989) #20 HMGN5 (ENSANAG00000021686) #21 ENSANAG00000023760 ENSANAG00000022748 ENSANAG00000030880 BRWD3 (ENSANAG00000008738) #22 ENSANAG00000026677 ENSANAG00000020981 TBX22 (ENSANAG00000021162) #26 ENSANAG00000029835 ITM2A (ENSANAG00000036156) #27 GPR174 (ENSANAG00000019966) #28 P2RY10 (ENSANAG00000020031) #30 LPAR4 (ENSANAG00000020241) #31 ENSANAG00000035162 ENSANAG00000024359 ENSANAG00000033757 TAF9B (ENSANAG00000036258) #37 PGK1 (ENSANAG00000024705) ATP7A (ENSANAG00000023455) ENSANAG00000022195 Catarrhini ANCESTRAL SPECIES 12 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.m.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000166733 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697.f #37 ENSGT00390000008820.e.b.a.a.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b ENSGT00390000012030.b.a ENSGT00940000155902 Cercopithecidae ANCESTRAL SPECIES 19 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.m.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000166733 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697.f #37 ENSGT00390000008820.e.b.a.a.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 Cercopithecinae ANCESTRAL SPECIES 13 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.m.a.a.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000166733 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT00940000155351.bb.d ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697.f #37 ENSGT00390000008820.e.b.a.a.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b ENSGT00390000012030.b.a ENSGT00940000155902 Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.m.a.a.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00910000148056 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000166733 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT00940000155351.bb.d ENSGT01100000263536.A.a.a.b #30 ENSGT00950000182907.a.b.b.a.q.b ENSGT01040000240444.A.a.a.a.b #31 ENSGT00950000183070.a.a.i.a.b ENSGT01100000263536.B.c.b #34 ENSGT00940000161697.f #37 ENSGT00390000008820.e.b.a.a.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b Cercopithecinae_b ANCESTRAL SPECIES 62 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00910000148056 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT00940000155351.bb.d ENSGT01100000263536.A.a.a.b #30 ENSGT00950000182907.a.b.b.a.q.b ENSGT01040000240444.A.a.a.a.b #31 ENSGT00950000183070.a.a.i.a.b ENSGT01100000263536.B.c.b #34 ENSGT00940000161697.f.b #37 ENSGT00390000008820.e.b.a.a.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b ENSGT00390000012030.b.a Olive baboon MODERN SPECIES 792 RPS6KA6 (ENSPANG00000012943) #16 ENSPANG00000013859 #17 ENSPANG00000048271 ENSPANG00000040401 POU3F4 (ENSPANG00000019402) #18 ENSPANG00000044225 ENSPANG00000049450 ENSPANG00000048854 ENSPANG00000044073 ENSPANG00000040118 ENSPANG00000045643 ENSPANG00000038814 #19 SH3BGRL (ENSPANG00000008366) #20 HMGN5 (ENSPANG00000049626) #21 ENSPANG00000002483 BRWD3 (ENSPANG00000020251) #22 ENSPANG00000045458 TENT5D (ENSPANG00000047561) #24 TBX22 (ENSPANG00000025094) #26 ITM2A (ENSPANG00000004635) #27 ENSPANG00000037018 GPR174 (ENSPANG00000001913) #28 ENSPANG00000043750 P2RY10 (ENSPANG00000010847) #30 LPAR4 (ENSPANG00000014311) #31 ENSPANG00000038489 ENSPANG00000041600 #34 ENSPANG00000051297 #34 TAF9B (ENSPANG00000006121) #37 ENSPANG00000011695 ATP7A (ENSPANG00000019286) Cercopithecinae_d ANCESTRAL SPECIES 236 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000156017 #20 ENSGT00910000148056 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 Drill MODERN SPECIES 1713 SH3BGRL (ENSMLEG00000036272) #20 ENSMLEG00000032566 ENSMLEG00000036991 HMGN5 (ENSMLEG00000042090) #21 ENSMLEG00000030484 BRWD3 (ENSMLEG00000033616) #22 ENSMLEG00000035128 Sooty mangabey MODERN SPECIES 210 HDX (ENSCATG00000038854) #15 RPS6KA6 (ENSCATG00000016428) #16 CYLC1 (ENSCATG00000036867) #17 POU3F4 (ENSCATG00000019383) #18 ENSCATG00000039091 ENSCATG00000036649 ENSCATG00000013910 SH3BGRL (ENSCATG00000031766) #20 ENSCATG00000038731 HMGN5 (ENSCATG00000018617) #21 ENSCATG00000029855 ENSCATG00000029713 BRWD3 (ENSCATG00000038615) #22 Macaca ANCESTRAL SPECIES 13 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.m.a.b #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00910000148056 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000166733 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT00940000155351.bb.d ENSGT01100000263536.A.a.a.b #30 ENSGT00950000182907.a.b.b.a.q.b ENSGT01040000240444.A.a.a.a.b #31 ENSGT00950000183070.a.a.i.a.b ENSGT01100000263536.B.c.b #34 ENSGT00940000161697.f #37 ENSGT00390000008820.e.b.a.a.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b Macaca_a ANCESTRAL SPECIES 11 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183123.g.a.b.b.s.a ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.m.a.b #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00390000000153.l.b.c.b.b.s ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000166733 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT00940000155351.bb.d ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00950000183070.a.a.j.a.a.a ENSGT01100000263536.B.c.b #34 ENSGT00940000161697.f #37 ENSGT00390000008820.e.b.a.a.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b ENSGT00390000012030.b.a Rhesus MODERN SPECIES 327 POF1B (ENSMMUG00000013604) #7 ZNF711 (ENSMMUG00000013603) #8 ENSMMUG00000007887 SATL1 (ENSMMUG00000004336) #10 APOOL (ENSMMUG00000004335) #11 ENSMMUG00000058186 HDX (ENSMMUG00000020536) #15 RPS6KA6 (ENSMMUG00000020532) #16 CYLC1 (ENSMMUG00000022081) #17 POU3F4 (ENSMMUG00000003112) #18 ENSMMUG00000051358 #19 SH3BGRL (ENSMMUG00000001689) #20 HMGN5 (ENSMMUG00000049618) #21 ENSMMUG00000061397 ENSMMUG00000032410 BRWD3 (ENSMMUG00000010763) #22 TENT5D (ENSMMUG00000043822) #24 ENSMMUG00000063550 TBX22 (ENSMMUG00000054447) #26 ITM2A (ENSMMUG00000003564) #27 ENSMMUG00000056870 GPR174 (ENSMMUG00000047442) #28 ENSMMUG00000032415 P2RY10 (ENSMMUG00000052164) #30 LPAR4 (ENSMMUG00000052823) #31 ENSMMUG00000029246 CYSLTR1 (ENSMMUG00000013387) #34 TAF9B (ENSMMUG00000012875) #37 PGK1 (ENSMMUG00000012874) ATP7A (ENSMMUG00000012871) COX7B (ENSMMUG00000015861) Crab-eating macaque MODERN SPECIES 175 CYLC1 (ENSMFAG00000044830) #17 ENSMFAG00000048140 POU3F4 (ENSMFAG00000027128) #18 ENSMFAG00000053410 ENSMFAG00000035175 ENSMFAG00000057041 ENSMFAG00000052377 ENSMFAG00000064912 ENSMFAG00000003130 ENSMFAG00000057440 SH3BGRL (ENSMFAG00000031027) #20 ENSMFAG00000064363 HMGN5 (ENSMFAG00000043155) #21 ENSMFAG00000065005 ENSMFAG00000046303 BRWD3 (ENSMFAG00000043437) #22 TENT5D (ENSMFAG00000059694) #24 ENSMFAG00000058505 TBX22 (ENSMFAG00000000575) #26 ENSMFAG00000050209 ITM2A (ENSMFAG00000037997) #27 GPR174 (ENSMFAG00000048513) #28 ENSMFAG00000058091 P2RY10 (ENSMFAG00000065797) #30 LPAR4 (ENSMFAG00000025015) #31 ENSMFAG00000031310 CYSLTR1 (ENSMFAG00000053095) #34 TAF9B (ENSMFAG00000045420) #37 ENSMFAG00000031271 ATP7A (ENSMFAG00000037371) COX7B (ENSMFAG00000002971) Pig-tailed macaque MODERN SPECIES 85 ENSMNEG00000040680 ENSMNEG00000039695 SH3BGRL (ENSMNEG00000032748) #20 ENSMNEG00000036403 HMGN5 (ENSMNEG00000029641) #21 ENSMNEG00000038133 ENSMNEG00000003904 BRWD3 (ENSMNEG00000028960) #22 TBX22 (ENSMNEG00000002289) #26 ITM2A (ENSMNEG00000028333) #27 GPR174 (ENSMNEG00000015097) #28 ENSMNEG00000004426 P2RY10 (ENSMNEG00000001678) #30 ENSMNEG00000039449 LPAR4 (ENSMNEG00000026886) #31 ENSMNEG00000034394 ENSMNEG00000030251 CYSLTR1 (ENSMNEG00000013446) #34 TAF9B (ENSMNEG00000040165) #37 ENSMNEG00000034194 ATP7A (ENSMNEG00000018557) ENSMNEG00000033259 MAGT1 (ENSMNEG00000039288) Vervet Monkey MODERN SPECIES 203 ENSCSAG00000000071 KLHL4 (ENSCSAG00000010443) DACH2 (ENSCSAG00000010460) CHM (ENSCSAG00000010508) ENSCSAG00000010519 #7 ZNF711 (ENSCSAG00000010527) #8 SATL1 (ENSCSAG00000010536) #10 HDX (ENSCSAG00000010546) #15 RPS6KA6 (ENSCSAG00000010555) #16 CYLC1 (ENSCSAG00000010571) #17 POU3F4 (ENSCSAG00000000074) #18 ENSCSAG00000010588 SH3BGRL (ENSCSAG00000010614) #20 HMGN5 (ENSCSAG00000010621) #21 ENSCSAG00000000076 BRWD3 (ENSCSAG00000010659) #22 ENSCSAG00000010700 TENT5D (ENSCSAG00000000078) #24 TBX22 (ENSCSAG00000010713) #26 ITM2A (ENSCSAG00000010721) #27 GPR174 (ENSCSAG00000000080) #28 ENSCSAG00000000082 P2RY10 (ENSCSAG00000000084) #30 LPAR4 (ENSCSAG00000000086) #31 CYSLTR1 (ENSCSAG00000000088) #34 TAF9B (ENSCSAG00000010740) #37 ENSCSAG00000010747 ATP7A (ENSCSAG00000010766) MAGT1 (ENSCSAG00000010777) ATRX (ENSCSAG00000010797) FGF16 (ENSCSAG00000010806) Rhinopithecus ANCESTRAL SPECIES ENSGT00950000183107.a.b.b #22 Golden snub-nosed monkey MODERN SPECIES 1102 BRWD3 (ENSRROG00000033259) #22 Black snub-nosed monkey MODERN SPECIES 1763 BRWD3 (ENSRBIG00000038419) #22 Hominoidea ANCESTRAL SPECIES 16 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00940000154911.v ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.m.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697.f #37 ENSGT00390000008820.e.b.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 Hominidae ANCESTRAL SPECIES 8 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00940000154911.v ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.m.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697.f #37 ENSGT00390000008820.e.b.a.b ENSGT00390000008820.e.b.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b ENSGT00390000012030.b.a ENSGT00940000155902 Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00940000154911.v ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.m.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000153314.b ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697.f #37 ENSGT00390000008820.e.b.a.b ENSGT00390000008820.e.b.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b ENSGT00390000012030.b.a ENSGT00940000155902 Homo/Pan group ANCESTRAL SPECIES 9 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00940000154911.v ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.m.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000153314.b ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697.f #37 ENSGT00390000008820.e.b.a.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 Pan ANCESTRAL SPECIES 6 ENSGT00390000001134.b ENSGT00940000154911.v ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.m.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000153314.b ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000182869.e.a.b.sb.b.a.a.a ENSGT00950000183107.a.b.b #22 ENSGT00950000182787.C.d ENSGT00940000162350.b.a ENSGT00940000162350.b.b ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697.f #37 ENSGT00390000008820.e.b.a.b ENSGT00390000008820.e.b.b ENSGT00940000159568 ENSGT00390000012178.g.a.b.b Bonobo MODERN SPECIES 369 ENSPPAG00000028498 POF1B (ENSPPAG00000033485) #7 ZNF711 (ENSPPAG00000038129) #8 ENSPPAG00000033891 #10 APOOL (ENSPPAG00000037582) #11 HDX (ENSPPAG00000031927) #15 RPS6KA6 (ENSPPAG00000010461) #16 CYLC1 (ENSPPAG00000019947) #17 ENSPPAG00000043882 POU3F4 (ENSPPAG00000017170) #18 ENSPPAG00000040389 ENSPPAG00000037558 SH3BGRL (ENSPPAG00000035293) #20 ENSPPAG00000037242 ENSPPAG00000037661 BRWD3 (ENSPPAG00000036225) #22 ENSPPAG00000038929 ENSPPAG00000019114 ENSPPAG00000042789 TBX22 (ENSPPAG00000040549) #26 ITM2A (ENSPPAG00000031833) #27 GPR174 (ENSPPAG00000016269) #28 CYSLTR1 (ENSPPAG00000008752) #34 TAF9B (ENSPPAG00000042950) #37 ENSPPAG00000039675 ATP7A (ENSPPAG00000041943) COX7B (ENSPPAG00000038135) MAGT1 (ENSPPAG00000037154) ATRX (ENSPPAG00000043806) FGF16 (ENSPPAG00000033879) MAGEE1 (ENSPPAG00000023414) Chimpanzee MODERN SPECIES 972 CHM (ENSPTRG00000022071) POF1B (ENSPTRG00000022070) #7 ZNF711 (ENSPTRG00000022069) #8 ENSPTRG00000022068 #10 ENSPTRG00000043670 APOOL (ENSPTRG00000022067) #11 ENSPTRG00000048780 HDX (ENSPTRG00000022065) #15 RPS6KA6 (ENSPTRG00000022064) #16 CYLC1 (ENSPTRG00000022063) #17 POU3F4 (ENSPTRG00000040705) #18 ENSPTRG00000047666 SH3BGRL (ENSPTRG00000022061) #20 HMGN5 (ENSPTRG00000022527) #21 ENSPTRG00000048534 BRWD3 (ENSPTRG00000022060) #22 ENSPTRG00000045129 ENSPTRG00000046735 ENSPTRG00000047256 TENT5D (ENSPTRG00000049359) #24 TBX22 (ENSPTRG00000022058) #26 ITM2A (ENSPTRG00000022057) #27 GPR174 (ENSPTRG00000039454) #28 P2RY10 (ENSPTRG00000050132) #30 LPAR4 (ENSPTRG00000022056) #31 CYSLTR1 (ENSPTRG00000022054) #34 TAF9B (ENSPTRG00000022053) #37 PGK1 (ENSPTRG00000022052) ATP7A (ENSPTRG00000022050) COX7B (ENSPTRG00000022049) MAGT1 (ENSPTRG00000022048) Human MODERN SPECIES 1827 TGIF2LX (ENSG00000153779) CPXCR1 (ENSG00000147183) KLHL4 (ENSG00000102271) DACH2 (ENSG00000126733) CHM (ENSG00000188419) POF1B (ENSG00000124429) #7 ZNF711 (ENSG00000147180) #8 SATL1 (ENSG00000184788) #10 APOOL (ENSG00000155008) #11 HDX (ENSG00000165259) #15 RPS6KA6 (ENSG00000072133) #16 CYLC1 (ENSG00000183035) #17 POU3F4 (ENSG00000196767) #18 SH3BGRL (ENSG00000131171) #20 HMGN5 (ENSG00000198157) #21 BRWD3 (ENSG00000165288) #22 TENT5D (ENSG00000174016) #24 TBX22 (ENSG00000122145) #26 ITM2A (ENSG00000078596) #27 GPR174 (ENSG00000147138) #28 P2RY10 (ENSG00000078589) #30 LPAR4 (ENSG00000147145) #31 RTL3 (ENSG00000179300) #32 CYSLTR1 (ENSG00000173198) #34 TAF9B (ENSG00000187325) #37 PGAM4 (ENSG00000226784) PGK1 (ENSG00000102144) ATP7A (ENSG00000165240) COX7B (ENSG00000131174) MAGT1 (ENSG00000102158) ATRX (ENSG00000085224) Gorilla MODERN SPECIES 523 CHM (ENSGGOG00000022912) POF1B (ENSGGOG00000016908) #7 ZNF711 (ENSGGOG00000006110) #8 SATL1 (ENSGGOG00000016333) #10 ENSGGOG00000016329 #11 HDX (ENSGGOG00000005551) #15 RPS6KA6 (ENSGGOG00000016474) #16 CYLC1 (ENSGGOG00000001587) #17 POU3F4 (ENSGGOG00000027353) #18 ENSGGOG00000025534 SH3BGRL (ENSGGOG00000009664) #20 HMGN5 (ENSGGOG00000016479) #21 ENSGGOG00000039492 ENSGGOG00000037044 ENSGGOG00000039837 BRWD3 (ENSGGOG00000004108) #22 ENSGGOG00000015916 ENSGGOG00000043041 TBX22 (ENSGGOG00000008990) #26 ITM2A (ENSGGOG00000026998) #27 GPR174 (ENSGGOG00000024322) #28 CYSLTR1 (ENSGGOG00000003276) #34 TAF9B (ENSGGOG00000002470) #37 PGK1 (ENSGGOG00000017111) ATP7A (ENSGGOG00000025640) COX7B (ENSGGOG00000023347) MAGT1 (ENSGGOG00000010342) ATRX (ENSGGOG00000024999) FGF16 (ENSGGOG00000002237) ENSGGOG00000025599 ENSGGOG00000027341 Orangutan MODERN SPECIES 242 PABPC5 (ENSPPYG00000020526) TGIF2LX (ENSPPYG00000020525) KLHL4 (ENSPPYG00000020523) DACH2 (ENSPPYG00000020521) CHM (ENSPPYG00000020520) POF1B (ENSPPYG00000020519) #7 ZNF711 (ENSPPYG00000020518) #8 SATL1 (ENSPPYG00000020517) #10 APOOL (ENSPPYG00000020516) #11 HDX (ENSPPYG00000020514) #15 RPS6KA6 (ENSPPYG00000020513) #16 CYLC1 (ENSPPYG00000020512) #17 POU3F4 (ENSPPYG00000020510) #18 SH3BGRL (ENSPPYG00000020509) #20 HMGN5 (ENSPPYG00000020508) #21 BRWD3 (ENSPPYG00000020507) #22 TBX22 (ENSPPYG00000020504) #26 ITM2A (ENSPPYG00000020503) #27 GPR174 (ENSPPYG00000020502) #28 P2RY10 (ENSPPYG00000020501) #30 LPAR4 (ENSPPYG00000020500) #31 CYSLTR1 (ENSPPYG00000020498) #34 TAF9B (ENSPPYG00000020497) #37 PGK1 (ENSPPYG00000020496) ATP7A (ENSPPYG00000020495) COX7B (ENSPPYG00000020494) MAGT1 (ENSPPYG00000020493) ATRX (ENSPPYG00000020491) FGF16 (ENSPPYG00000036906) MAGEE1 (ENSPPYG00000020489) PBDC1 (ENSPPYG00000020488) Gibbon DUPLICATION Gibbon MODERN SPECIES 449 ENSNLEG00000027890 CHM (ENSNLEG00000002762) ENSNLEG00000032608 POF1B (ENSNLEG00000002694) #7 ZNF711 (ENSNLEG00000002656) #8 APOOL (ENSNLEG00000002634) #11 HDX (ENSNLEG00000002624) #15 RPS6KA6 (ENSNLEG00000002544) #16 CYLC1 (ENSNLEG00000002527) #17 ENSNLEG00000032492 ENSNLEG00000028823 SH3BGRL (ENSNLEG00000002464) #20 HMGN5 (ENSNLEG00000034708) #21 ENSNLEG00000034864 ENSNLEG00000034470 BRWD3 (ENSNLEG00000002210) #22 ENSNLEG00000029546 TBX22 (ENSNLEG00000002116) #26 GPR174 (ENSNLEG00000019047) #28 ENSNLEG00000034148 P2RY10 (ENSNLEG00000002088) #30 LPAR4 (ENSNLEG00000019046) #31 ENSNLEG00000002074 CYSLTR1 (ENSNLEG00000002067) #34 TAF9B (ENSNLEG00000001378) #37 ENSNLEG00000001423 ATP7A (ENSNLEG00000001351) MAGT1 (ENSNLEG00000001330) ATRX (ENSNLEG00000001144) FGF16 (ENSNLEG00000001138) ENSNLEG00000001137 Gibbon DUPLICATION Gibbon MODERN SPECIES 9 ENSNLEG00000014270 ENSNLEG00000018294 NBAS (ENSNLEG00000014272) DDX1 (ENSNLEG00000014417) ENSNLEG00000014496 ENSNLEG00000031164 CYRIA (ENSNLEG00000001413) RAD51AP2 (ENSNLEG00000001524) VSNL1 (ENSNLEG00000001537) SMC6 (ENSNLEG00000001569) GEN1 (ENSNLEG00000029593) MSGN1 (ENSNLEG00000018810) KCNS3 (ENSNLEG00000001834) RDH14 (ENSNLEG00000028221) NT5C1B (ENSNLEG00000001850) ENSNLEG00000033627 #22 OSR1 (ENSNLEG00000002004) ENSNLEG00000028344 TTC32 (ENSNLEG00000030350) WDR35 (ENSNLEG00000002032) MATN3 (ENSNLEG00000002247) LAPTM4A (ENSNLEG00000002305) SDC1 (ENSNLEG00000031569) ENSNLEG00000029549 ENSNLEG00000002506 PUM2 (ENSNLEG00000002509) RHOB (ENSNLEG00000030179) ENSNLEG00000030630 HS1BP3 (ENSNLEG00000002614) GDF7 (ENSNLEG00000002638) LDAH (ENSNLEG00000032022) Gibbon MODERN SPECIES 15 CAPZA3 (ENSNLEG00000018528) PLCZ1 (ENSNLEG00000004405) PIK3C2G (ENSNLEG00000004329) RERGL (ENSNLEG00000004322) ENSNLEG00000031747 ENSNLEG00000027110 ENSNLEG00000004291 ENSNLEG00000027116 MGST1 (ENSNLEG00000004275) SLC15A5 (ENSNLEG00000004266) DERA (ENSNLEG00000004222) STRAP (ENSNLEG00000004160) EPS8 (ENSNLEG00000004075) PTPRO (ENSNLEG00000004033) RERG (ENSNLEG00000029492) ENSNLEG00000034206 #22 PDE6H (ENSNLEG00000004014) ARHGDIB (ENSNLEG00000003994) ERP27 (ENSNLEG00000003988) ENSNLEG00000031944 ENSNLEG00000003978 ART4 (ENSNLEG00000003973) C12orf60 (ENSNLEG00000003965) SMCO3 (ENSNLEG00000033132) WBP11 (ENSNLEG00000003926) ENSNLEG00000029275 GUCY2C (ENSNLEG00000003853) ENSNLEG00000035153 PLBD1 (ENSNLEG00000003815) ATF7IP (ENSNLEG00000003788) GRIN2B (ENSNLEG00000003765) Laurasiatheria ANCESTRAL SPECIES 16 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00940000163888 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00940000163888 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00940000163888 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00940000163888 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 Chiroptera ANCESTRAL SPECIES 28 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT00390000015224.c.a.a.b ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 Megabat MODERN SPECIES 1956 BRWD3 (ENSPVAG00000013684) #22 Microchiroptera ANCESTRAL SPECIES 28 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00530000067269 #12 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 ENSGT00940000159568 Microbat MODERN SPECIES 941 APOOL (ENSMLUG00000011384) #11 ENSMLUG00000026037 #12 ENSMLUG00000022222 #13 ENSMLUG00000027285 ENSMLUG00000006649 #15 ENSMLUG00000027800 #15 RPS6KA6 (ENSMLUG00000015440) #16 ENSMLUG00000011590 #17 POU3F4 (ENSMLUG00000004140) #18 ENSMLUG00000006065 ENSMLUG00000025070 #19 SH3BGRL (ENSMLUG00000010051) #20 HMGN5 (ENSMLUG00000029467) #21 ENSMLUG00000024815 ENSMLUG00000013978 BRWD3 (ENSMLUG00000005607) #22 TENT5D (ENSMLUG00000000409) #24 ENSMLUG00000024811 #25 TBX22 (ENSMLUG00000016826) #26 ITM2A (ENSMLUG00000010431) #27 ENSMLUG00000025668 GPR174 (ENSMLUG00000005162) #28 ENSMLUG00000025815 #29 P2RY10 (ENSMLUG00000010499) #30 LPAR4 (ENSMLUG00000006096) #31 RTL3 (ENSMLUG00000002371) #32 TAF9B (ENSMLUG00000014581) #37 PGK1 (ENSMLUG00000017791) ENSMLUG00000026413 ATP7A (ENSMLUG00000025990) ENSMLUG00000022443 Greater horseshoe bat MODERN SPECIES POF1B (ENSRFEG00010004986) #7 ZNF711 (ENSRFEG00010005016) #8 ENSRFEG00010005034 #9 ENSRFEG00010005042 #11 ENSRFEG00010005048 #13 HDX (ENSRFEG00010005055) #15 ENSRFEG00010005063 RPS6KA6 (ENSRFEG00010005068) #16 CYLC1 (ENSRFEG00010005076) #17 ENSRFEG00010005081 POU3F4 (ENSRFEG00010005086) #18 ENSRFEG00010005097 ENSRFEG00010005101 #19 SH3BGRL (ENSRFEG00010005104) #20 HMGN5 (ENSRFEG00010005112) #21 BRWD3 (ENSRFEG00010005125) #22 TENT5D (ENSRFEG00010005151) #24 ENSRFEG00010005160 #25 TBX22 (ENSRFEG00010005171) #26 ENSRFEG00010005179 ITM2A (ENSRFEG00010005189) #27 GPR174 (ENSRFEG00010005200) #28 P2RY10 (ENSRFEG00010005207) #30 LPAR4 (ENSRFEG00010005218) #31 RTL3 (ENSRFEG00010005225) #32 ENSRFEG00010005233 #33 CYSLTR1 (ENSRFEG00010005241) #34 ENSRFEG00010005245 ENSRFEG00010005262 #35 ENSRFEG00010005274 TAF9B (ENSRFEG00010005277) #37 Equus ANCESTRAL SPECIES 27 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000163888.c.b ENSGT00940000163888.d ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00940000171348 ENSGT00950000183107.a.b.b #22 ENSGT00390000015252.z ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000159568 Donkey MODERN SPECIES 36 ENSEASG00005033831 #9 ENSEASG00005011122 #10 APOOL (ENSEASG00005011125) #11 ENSEASG00005036812 ENSEASG00005034949 #13 ENSEASG00005033871 HDX (ENSEASG00005027565) #15 RPS6KA6 (ENSEASG00005029386) #16 CYLC1 (ENSEASG00005017371) #17 POU3F4 (ENSEASG00005005148) #18 ENSEASG00005035953 ENSEASG00005033419 #19 ENSEASG00005010782 SH3BGRL (ENSEASG00005032697) #20 ENSEASG00005030462 BRWD3 (ENSEASG00005012247) #22 ENSEASG00005007773 TENT5D (ENSEASG00005036140) #24 ENSEASG00005035394 #25 TBX22 (ENSEASG00005034364) #26 ITM2A (ENSEASG00005021993) #27 GPR174 (ENSEASG00005033902) #28 ENSEASG00005025689 #29 P2RY10 (ENSEASG00005024071) #30 LPAR4 (ENSEASG00005032556) #31 RTL3 (ENSEASG00005024251) #32 CYSLTR1 (ENSEASG00005033616) #34 ENSEASG00005033851 #35 TAF9B (ENSEASG00005006471) #37 PGK1 (ENSEASG00005006468) ATP7A (ENSEASG00005005867) Horse MODERN SPECIES 480 APOOL (ENSECAG00000009229) #11 ENSECAG00000035131 ENSECAG00000007854 #13 ENSECAG00000036171 HDX (ENSECAG00000024862) #15 RPS6KA6 (ENSECAG00000019431) #16 CYLC1 (ENSECAG00000019066) #17 POU3F4 (ENSECAG00000002519) #18 ENSECAG00000058100 ENSECAG00000038924 ENSECAG00000047832 ENSECAG00000002165 #19 SH3BGRL (ENSECAG00000012612) #20 ENSECAG00000033394 ENSECAG00000054141 BRWD3 (ENSECAG00000007187) #22 ENSECAG00000028456 TENT5D (ENSECAG00000055387) #24 ENSECAG00000018625 #25 TBX22 (ENSECAG00000014426) #26 ENSECAG00000033730 #27 ITM2A (ENSECAG00000011335) #27 GPR174 (ENSECAG00000032528) #28 ENSECAG00000003466 #29 P2RY10 (ENSECAG00000003181) #30 LPAR4 (ENSECAG00000041218) #31 RTL3 (ENSECAG00000029496) #32 CYSLTR1 (ENSECAG00000007107) #34 ENSECAG00000015462 #35 TAF9B (ENSECAG00000010189) #37 PGK1 (ENSECAG00000014984) Carnivora ANCESTRAL SPECIES 11 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000159568 ENSGT00390000012178.g.b.a.b Felidae ANCESTRAL SPECIES 12 ENSGT00940000162668 ENSGT00940000163848 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a.c ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00530000063666.a.c #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00940000159568 ENSGT00390000012178.g.b.a.a ENSGT00390000012030.b.a ENSGT00940000155902 Panthera ANCESTRAL SPECIES 51 ENSGT00940000157822 ENSGT00530000065541 ENSGT00940000158335 ENSGT00940000162668 ENSGT00940000163848 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a.c ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697 #37 Panthera_a ANCESTRAL SPECIES 59 ENSGT00940000157822 ENSGT00940000158335 ENSGT00980000199103.A ENSGT00940000162668 ENSGT00940000163848 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a.c ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697 #37 lion MODERN SPECIES 88 ENSPLOG00000015940 ENSPLOG00000015979 PABPC5 (ENSPLOG00000016010) ENSPLOG00000016027 KLHL4 (ENSPLOG00000016046) DACH2 (ENSPLOG00000016162) ENSPLOG00000016565 ENSPLOG00000016617 #13 HDX (ENSPLOG00000016668) #15 RPS6KA6 (ENSPLOG00000016820) #16 CYLC1 (ENSPLOG00000017131) #17 POU3F4 (ENSPLOG00000017183) #18 ENSPLOG00000017210 SH3BGRL (ENSPLOG00000017246) #20 ENSPLOG00000017281 #21 BRWD3 (ENSPLOG00000017318) #22 TENT5D (ENSPLOG00000017623) #24 ENSPLOG00000017648 #29 P2RY10 (ENSPLOG00000017725) #30 LPAR4 (ENSPLOG00000017742) #31 CYSLTR1 (ENSPLOG00000017757) #34 TAF9B (ENSPLOG00000017774) #37 ENSPLOG00000017801 CFAP47 (ENSPLOG00000017913) MAGEB16 (ENSPLOG00000018561) ENSPLOG00000018607 TMEM47 (ENSPLOG00000018651) ENSPLOG00000018687 ENSPLOG00000018761 ENSPLOG00000018811 ENSPLOG00000019098 leopard MODERN SPECIES 125 ENSPPRG00000017727 HDX (ENSPPRG00000018008) #15 RPS6KA6 (ENSPPRG00000018928) #16 CYLC1 (ENSPPRG00000019163) #17 POU3F4 (ENSPPRG00000012512) #18 ENSPPRG00000019280 ENSPPRG00000019532 SH3BGRL (ENSPPRG00000019552) #20 ENSPPRG00000012518 BRWD3 (ENSPPRG00000019725) #22 TENT5D (ENSPPRG00000012522) #24 ENSPPRG00000019889 #25 Tiger MODERN SPECIES 266 ENSPTIG00000020470 SH3BGRL (ENSPTIG00000020533) #20 BRWD3 (ENSPTIG00000020773) #22 TENT5D (ENSPTIG00000000234) #24 Cat MODERN SPECIES 252 DACH2 (ENSFCAG00000022761) CHM (ENSFCAG00000030652) POF1B (ENSFCAG00000031668) #7 ZNF711 (ENSFCAG00000013317) #8 APOOL (ENSFCAG00000033790) #11 ENSFCAG00000051849 #13 HDX (ENSFCAG00000005781) #15 ENSFCAG00000039681 RPS6KA6 (ENSFCAG00000009130) #16 CYLC1 (ENSFCAG00000012662) #17 ENSFCAG00000048151 POU3F4 (ENSFCAG00000011964) #18 ENSFCAG00000025360 SH3BGRL (ENSFCAG00000030770) #20 ENSFCAG00000037632 #21 BRWD3 (ENSFCAG00000022198) #22 TENT5D (ENSFCAG00000031837) #24 ENSFCAG00000018360 #25 TBX22 (ENSFCAG00000002301) #26 ITM2A (ENSFCAG00000007957) #27 P2RY10 (ENSFCAG00000035535) #30 CYSLTR1 (ENSFCAG00000024786) #34 ENSFCAG00000022156 #35 TAF9B (ENSFCAG00000025493) #37 ENSFCAG00000013209 ENSFCAG00000034406 ENSFCAG00000053752 ATP7A (ENSFCAG00000022051) COX7B (ENSFCAG00000033601) MAGT1 (ENSFCAG00000024932) ATRX (ENSFCAG00000030040) Caniformia ANCESTRAL SPECIES 22 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000159568 ENSGT00390000012178.g.b.a.b.d.a ENSGT00390000012030.b.a ENSGT00940000155902 Canidae ANCESTRAL SPECIES 59 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00950000185197 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000159568 ENSGT00950000185204 ENSGT00390000012178.g.b.a.b.d.a.b ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 ENSGT00390000016333.r ENSGT00940000163487 Canis_lupus ANCESTRAL SPECIES 44 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00940000154191.i.a.l.a.b ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.e #11 ENSGT00950000185197 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000153288.a.b.a.b ENSGT01100000263536.B.c.b #34 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000159568 ENSGT00390000012178.g.b.a.b.d.a.a ENSGT00950000185204 ENSGT00390000012178.g.b.a.b.d.a.b ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 Dog MODERN SPECIES 144 POF1B (ENSCAFG00845024223) #7 ZNF711 (ENSCAFG00845023911) #8 ENSCAFG00845023827 ENSCAFG00845023778 #10 APOOL (ENSCAFG00845023656) #11 ENSCAFG00845023591 #13 ENSCAFG00845023552 RPS6KA6 (ENSCAFG00845022907) #16 CYLC1 (ENSCAFG00845022676) #17 POU3F4 (ENSCAFG00845022645) #18 ENSCAFG00845022569 ENSCAFG00845022468 ENSCAFG00845022429 SH3BGRL (ENSCAFG00845022327) #20 ENSCAFG00845022233 #21 BRWD3 (ENSCAFG00845021308) #22 TENT5D (ENSCAFG00845021138) #24 GPR174 (ENSCAFG00845021116) #28 P2RY10 (ENSCAFG00845021084) #30 ENSCAFG00845021038 LPAR4 (ENSCAFG00845021017) #31 ENSCAFG00845020985 ENSCAFG00845020948 CYSLTR1 (ENSCAFG00845020915) #34 TAF9B (ENSCAFG00845020868) #37 PGK1 (ENSCAFG00845020758) ENSCAFG00845020708 ATP7A (ENSCAFG00845020199) ENSCAFG00845020039 ENSCAFG00845020008 MAGT1 (ENSCAFG00845019924) Dingo MODERN SPECIES 265 ENSCAFG00020025040 ENSCAFG00020025039 ENSCAFG00020025029 SH3BGRL (ENSCAFG00020025027) #20 ENSCAFG00020025022 #21 BRWD3 (ENSCAFG00020025005) #22 TENT5D (ENSCAFG00020025000) #24 GPR174 (ENSCAFG00020024998) #28 ENSCAFG00020024996 P2RY10 (ENSCAFG00020024995) #30 ENSCAFG00020024991 LPAR4 (ENSCAFG00020024989) #31 ENSCAFG00020024988 ENSCAFG00020024987 CYSLTR1 (ENSCAFG00020024986) #34 TAF9B (ENSCAFG00020024984) #37 PGK1 (ENSCAFG00020024764) ATP7A (ENSCAFG00020024712) ENSCAFG00020024708 ENSCAFG00020024706 MAGT1 (ENSCAFG00020024703) Red fox MODERN SPECIES 287 ENSVVUG00000027975 #21 BRWD3 (ENSVVUG00000027981) #22 TENT5D (ENSVVUG00000027995) #24 Caniformia_b ANCESTRAL SPECIES 24 ENSGT00390000003732 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000159568 ENSGT00390000012178.g.b.a.b.d.a ENSGT00390000012178.g.b.a.b.d.b.a ENSGT00390000012030.b.a Ursidae ANCESTRAL SPECIES 47 ENSGT00940000160311 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00950000183115.b.b.e.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000159568 ENSGT00390000012178.g.b.a.b.d.b.a ENSGT00390000012030.b.a Giant Panda MODERN SPECIES 2288 KLHL4 (ENSAMEG00000004825) DACH2 (ENSAMEG00000000232) ENSAMEG00000018811 CHM (ENSAMEG00000010190) POF1B (ENSAMEG00000013055) #7 ZNF711 (ENSAMEG00000013076) #8 ENSAMEG00000000814 #10 APOOL (ENSAMEG00000000829) #11 ENSAMEG00000019387 #13 HDX (ENSAMEG00000000875) #15 RPS6KA6 (ENSAMEG00000003648) #16 CYLC1 (ENSAMEG00000002561) #17 POU3F4 (ENSAMEG00000019562) #18 SH3BGRL (ENSAMEG00000027788) #20 HMGN5 (ENSAMEG00000030368) #21 BRWD3 (ENSAMEG00000008691) #22 TENT5D (ENSAMEG00000018974) #24 ITM2A (ENSAMEG00000006587) #27 GPR174 (ENSAMEG00000020171) #28 P2RY10 (ENSAMEG00000020169) #30 LPAR4 (ENSAMEG00000020009) #31 ENSAMEG00000024348 #33 CYSLTR1 (ENSAMEG00000019893) #34 TAF9B (ENSAMEG00000017613) #37 ENSAMEG00000017619 ATP7A (ENSAMEG00000017631) COX7B (ENSAMEG00000028958) MAGT1 (ENSAMEG00000006102) ENSAMEG00000030323 ATRX (ENSAMEG00000001904) FGF16 (ENSAMEG00000031057) Ursus ANCESTRAL SPECIES 203 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00950000183115.b.b.e.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 Polar bear MODERN SPECIES 224 CHM (ENSUMAG00000023882) POF1B (ENSUMAG00000023875) #7 ZNF711 (ENSUMAG00000023873) #8 ENSUMAG00000023871 #10 APOOL (ENSUMAG00000023869) #11 ENSUMAG00000023865 #13 HDX (ENSUMAG00000023864) #15 ENSUMAG00000023863 #16 CYLC1 (ENSUMAG00000023861) #17 POU3F4 (ENSUMAG00000023858) #18 ENSUMAG00000023857 ENSUMAG00000023853 ENSUMAG00000023847 SH3BGRL (ENSUMAG00000023846) #20 ENSUMAG00000023844 #21 BRWD3 (ENSUMAG00000023646) #22 TENT5D (ENSUMAG00000023620) #24 ENSUMAG00000023617 TBX22 (ENSUMAG00000023615) #26 ITM2A (ENSUMAG00000023612) #27 GPR174 (ENSUMAG00000023611) #28 ENSUMAG00000023610 #29 American black bear MODERN SPECIES 2267 ENSUAMG00000018928 #22 Mustelinae ANCESTRAL SPECIES 246 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 American mink MODERN SPECIES 563 BRWD3 (ENSNVIG00000012320) #22 Ferret MODERN SPECIES 523 BRWD3 (ENSMPUG00000012613) #22 TENT5D (ENSMPUG00000019452) #24 TBX22 (ENSMPUG00000012619) #26 Artiodactyla ANCESTRAL SPECIES 9 ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 ENSGT00940000159568 Suina ANCESTRAL SPECIES 7 ENSGT00940000163888 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 ENSGT00940000159568 ENSGT00390000012178.g.b.b ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 Chacoan peccary MODERN SPECIES 22 HDX (ENSCWAG00000001492) #15 RPS6KA6 (ENSCWAG00000001536) #16 CYLC1 (ENSCWAG00000001581) #17 ENSCWAG00000001587 POU3F4 (ENSCWAG00000001596) #18 SH3BGRL (ENSCWAG00000001606) #20 ENSCWAG00000001613 #21 BRWD3 (ENSCWAG00000001634) #22 TENT5D (ENSCWAG00000001683) #24 TBX22 (ENSCWAG00000001694) #26 ENSCWAG00000001703 ITM2A (ENSCWAG00000001718) #27 GPR174 (ENSCWAG00000001736) #28 P2RY10 (ENSCWAG00000001742) #30 LPAR4 (ENSCWAG00000001749) #31 CYSLTR1 (ENSCWAG00000001770) #34 ENSCWAG00000001774 TAF9B (ENSCWAG00000001780) #37 PGK1 (ENSCWAG00000001796) ENSCWAG00000001817 ATP7A (ENSCWAG00000001849) COX7B (ENSCWAG00000001934) MAGT1 (ENSCWAG00000001949) Pig MODERN SPECIES 300 POF1B (ENSSSCG00000012462) #7 ZNF711 (ENSSSCG00000021601) #8 ENSSSCG00000023546 #9 ENSSSCG00000038238 #10 APOOL (ENSSSCG00000012459) #11 ENSSSCG00000044442 #13 HDX (ENSSSCG00000038744) #15 RPS6KA6 (ENSSSCG00000012456) #16 CYLC1 (ENSSSCG00000012455) #17 POU3F4 (ENSSSCG00000012454) #18 ENSSSCG00000040430 ENSSSCG00000031731 ENSSSCG00000012452 #20 ENSSSCG00000032946 ENSSSCG00000038944 BRWD3 (ENSSSCG00000025156) #22 TENT5D (ENSSSCG00000012450) #24 TBX22 (ENSSSCG00000012449) #26 ITM2A (ENSSSCG00000012448) #27 ENSSSCG00000045237 GPR174 (ENSSSCG00000021734) #28 P2RY10 (ENSSSCG00000012446) #30 LPAR4 (ENSSSCG00000012445) #31 ENSSSCG00000052427 ENSSSCG00000052341 CYSLTR1 (ENSSSCG00000039203) #34 TAF9B (ENSSSCG00000026714) #37 PGK1 (ENSSSCG00000012440) ENSSSCG00000030886 ATP7A (ENSSSCG00000012437) COX7B (ENSSSCG00000032129) Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000159568 ENSGT00390000012178.g.b.b Camelidae ANCESTRAL SPECIES 43 ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000159568 ENSGT00390000012178.g.b.b ENSGT00390000012030.b.a Arabian camel MODERN SPECIES 204 ZNF711 (ENSCDRG00005021254) #8 ENSCDRG00005021249 #9 ENSCDRG00005021246 #10 APOOL (ENSCDRG00005021240) #11 ENSCDRG00005021233 #13 HDX (ENSCDRG00005021225) #15 ENSCDRG00005021222 RPS6KA6 (ENSCDRG00005021214) #16 CYLC1 (ENSCDRG00005021207) #17 POU3F4 (ENSCDRG00005021206) #18 ENSCDRG00005021204 ENSCDRG00005021199 #19 ENSCDRG00005021194 SH3BGRL (ENSCDRG00005021189) #20 ENSCDRG00005021186 #21 BRWD3 (ENSCDRG00005021171) #22 TENT5D (ENSCDRG00005021162) #24 ENSCDRG00005021154 #25 TBX22 (ENSCDRG00005021148) #26 ITM2A (ENSCDRG00005021142) #27 GPR174 (ENSCDRG00005021134) #28 ENSCDRG00005021132 #29 P2RY10 (ENSCDRG00005021126) #30 LPAR4 (ENSCDRG00005021124) #31 RTL3 (ENSCDRG00005021121) #32 CYSLTR1 (ENSCDRG00005021119) #34 TAF9B (ENSCDRG00005021113) #37 PGK1 (ENSCDRG00005021108) ATP7A (ENSCDRG00005021074) COX7B (ENSCDRG00005021062) MAGT1 (ENSCDRG00005021053) Alpaca MODERN SPECIES 1628 BRWD3 (ENSVPAG00000002929) #22 Artiodactyla_b ANCESTRAL SPECIES 19 ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000159568 ENSGT00390000012178.g.b.b ENSGT00390000012030.b.a Pecora ANCESTRAL SPECIES 27 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b.kb ENSGT00940000159568 ENSGT00390000012178.g.b.b.a.b ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 Yarkand deer MODERN SPECIES 1323 HDX (ENSCHYG00000021734) #15 RPS6KA6 (ENSCHYG00000021809) #16 ENSCHYG00000022413 ENSCHYG00000022431 CYLC1 (ENSCHYG00000022460) #17 ENSCHYG00000022492 POU3F4 (ENSCHYG00000022504) #18 ENSCHYG00000022538 ENSCHYG00000022587 ENSCHYG00000008699 ENSCHYG00000008712 #19 SH3BGRL (ENSCHYG00000008735) #20 ENSCHYG00000008778 ENSCHYG00000008869 ENSCHYG00000008921 BRWD3 (ENSCHYG00000008984) #22 ENSCHYG00000009463 ENSCHYG00000009482 TENT5D (ENSCHYG00000009524) #24 ENSCHYG00000009550 TBX22 (ENSCHYG00000009606) #26 ITM2A (ENSCHYG00000009688) #27 GPR174 (ENSCHYG00000009735) #28 P2RY10 (ENSCHYG00000009753) #30 LPAR4 (ENSCHYG00000009794) #31 CYSLTR1 (ENSCHYG00000009807) #34 ENSCHYG00000009821 #35 TAF9B (ENSCHYG00000010082) #37 ENSCHYG00000010187 ENSCHYG00000010325 ENSCHYG00000010341 Percora_a ANCESTRAL SPECIES 22 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b.kb ENSGT00940000159568 ENSGT00390000012178.g.b.b.a.b ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 Siberian musk deer MODERN SPECIES 9 POF1B (ENSMMSG00000010335) #7 ZNF711 (ENSMMSG00000010430) #8 ENSMMSG00000010476 #10 APOOL (ENSMMSG00000010528) #11 ENSMMSG00000010593 #13 HDX (ENSMMSG00000010697) #15 ENSMMSG00000010779 ENSMMSG00000010807 RPS6KA6 (ENSMMSG00000010835) #16 CYLC1 (ENSMMSG00000010990) #17 POU3F4 (ENSMMSG00000011014) #18 ENSMMSG00000011025 ENSMMSG00000011053 SH3BGRL (ENSMMSG00000011080) #20 HMGN5 (ENSMMSG00000000002) #21 BRWD3 (ENSMMSG00000000027) #22 ENSMMSG00000000165 TENT5D (ENSMMSG00000000196) #24 ENSMMSG00000000211 GPR174 (ENSMMSG00000000217) #28 P2RY10 (ENSMMSG00000000233) #30 LPAR4 (ENSMMSG00000000242) #31 ENSMMSG00000000270 CYSLTR1 (ENSMMSG00000000289) #34 ENSMMSG00000000301 #35 TAF9B (ENSMMSG00000000384) #37 ENSMMSG00000000413 ENSMMSG00000000439 ATP7A (ENSMMSG00000000479) ENSMMSG00000000541 MAGT1 (ENSMMSG00000000570) Bovidae ANCESTRAL SPECIES 23 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b.kb ENSGT00940000159568 ENSGT00390000012178.g.b.b.a.b ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 Caprinae ANCESTRAL SPECIES 52 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697 #37 ENSGT00390000008820.e.b.kb ENSGT00940000159568 ENSGT00390000012178.g.b.b.a.a.b ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00950000186410 ENSGT00940000160087 Rambouillet Sheep MODERN SPECIES 205 NHSL2 (ENSOARG00020025157) RTL5 (ENSOARG00020025206) PIN4 (ENSOARG00020025228) ERCC6L (ENSOARG00020025281) ENSOARG00020025291 CITED1 (ENSOARG00020025298) HDAC8 (ENSOARG00020025320) ENSOARG00020025389 PHKA1 (ENSOARG00020025431) ENSOARG00020025556 STAT4 (ENSOARG00020025579) STAT1 (ENSOARG00020025634) GLS (ENSOARG00020025702) ENSOARG00020025731 HMGN5 (ENSOARG00020015488) #21 BRWD3 (ENSOARG00020015617) #22 TENT5D (ENSOARG00020016386) #24 TBX22 (ENSOARG00020016413) #26 ITM2A (ENSOARG00020016499) #27 GPR174 (ENSOARG00020016533) #28 ENSOARG00020016548 ENSOARG00020016579 P2RY10 (ENSOARG00020016610) #30 LPAR4 (ENSOARG00020016628) #31 CYSLTR1 (ENSOARG00020016671) #34 TAF9B (ENSOARG00020016750) #37 PGK1 (ENSOARG00020016769) ATP7A (ENSOARG00020016877) ENSOARG00020017092 ENSOARG00020017129 MAGT1 (ENSOARG00020017197) Goat MODERN SPECIES 29 ENSCHIG00000022286 #21 SH3BGRL (ENSCHIG00000011349) #20 BRWD3 (ENSCHIG00000022090) #22 TENT5D (ENSCHIG00000019929) #24 TBX22 (ENSCHIG00000016490) #26 ENSCHIG00000022216 ITM2A (ENSCHIG00000000521) #27 ENSCHIG00000020119 LPAR4 (ENSCHIG00000000602) #31 P2RY10 (ENSCHIG00000002008) #30 GPR174 (ENSCHIG00000003329) #28 CYSLTR1 (ENSCHIG00000019948) #34 ENSCHIG00000023794 #35 ATRX (ENSCHIG00000013700) MAGT1 (ENSCHIG00000013861) ATP7A (ENSCHIG00000016420) ENSCHIG00000003253 ENSCHIG00000002486 Bovinae ANCESTRAL SPECIES 38 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00390000015224.c.a.a.b.f.a.b ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b.kb ENSGT00940000159568 ENSGT00390000012178.g.b.b.a.b.a ENSGT00390000012030.b.a ENSGT00940000155902 ENSGT00940000160087 Bos ANCESTRAL SPECIES 30 ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT01030000235010.e.a ENSGT00940000159242 #16 ENSGT00920000150804 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00390000015224.c.a.a.b.f.a.b ENSGT01030000234518.D #28 ENSGT00390000007560.k.b ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00390000009948.c.l ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b.kb ENSGT00940000159568 ENSGT00390000012178.g.b.b.a.b.a ENSGT00390000012030.b.a Bos_a ANCESTRAL SPECIES 19 ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT01030000235010.e.a ENSGT00940000159242 #16 ENSGT00920000150804 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00390000015224.c.a.a.a.t.a.b.a.a ENSGT01030000234518.D #28 ENSGT00390000007560.k.b ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00390000009948.c.l ENSGT01100000263536.B.c.b #34 ENSGT00550000074618.a.b.ab.a.a.a.a ENSGT00940000163592 #35 ENSGT00940000161697 #37 ENSGT00390000008820.e.b.kb ENSGT00940000159568 ENSGT00390000012178.g.b.b.a.b.a Wild yak MODERN SPECIES 2297 BRWD3 (ENSBMUG00000002257) #22 TENT5D (ENSBMUG00000002278) #24 Domestic yak MODERN SPECIES 69 POF1B (ENSBGRG00000025068) #7 ZNF711 (ENSBGRG00000025171) #8 APOOL (ENSBGRG00000025225) #11 ENSBGRG00000025291 #10 ENSBGRG00000025313 #13 HDX (ENSBGRG00000025367) #15 ENSBGRG00000025377 RPS6KA6 (ENSBGRG00000012307) #16 CYLC1 (ENSBGRG00000013173) #17 POU3F4 (ENSBGRG00000013340) #18 ENSBGRG00000013359 ENSBGRG00000013400 ENSBGRG00000013446 #19 SH3BGRL (ENSBGRG00000013469) #20 ENSBGRG00000013533 #21 BRWD3 (ENSBGRG00000013595) #22 TENT5D (ENSBGRG00000014080) #24 TBX22 (ENSBGRG00000014109) #26 ENSBGRG00000014224 ENSBGRG00000014249 GPR174 (ENSBGRG00000014278) #28 P2RY10 (ENSBGRG00000014291) #30 LPAR4 (ENSBGRG00000014316) #31 ENSBGRG00000014334 CYSLTR1 (ENSBGRG00000014355) #34 ENSBGRG00000014446 #35 TAF9B (ENSBGRG00000014722) #37 PGK1 (ENSBGRG00000014778) ATP7A (ENSBGRG00000015150) ENSBGRG00000015336 MAGT1 (ENSBGRG00000015408) Bos_b ANCESTRAL SPECIES 31 ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00390000008591 #15 ENSGT01030000235010.e.a ENSGT00940000159242 #16 ENSGT00920000150804 ENSGT00730000111075.b #17 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000161206 #26 ENSGT00390000015224.c.a.a.a.t.a.b.a.a ENSGT01030000234518.D #28 ENSGT00390000007560.k.b Hybrid Bos Indicus MODERN SPECIES 315 ENSBIXG00005022499 #10 APOOL (ENSBIXG00005022564) #11 ENSBIXG00005022647 #13 HDX (ENSBIXG00005022875) #15 ENSBIXG00005022936 ENSBIXG00005005756 ENSBIXG00005022974 ENSBIXG00005022982 RPS6KA6 (ENSBIXG00005004019) #16 ENSBIXG00005023627 CYLC1 (ENSBIXG00005023648) #17 POU3F4 (ENSBIXG00005023708) #18 ENSBIXG00005004073 SH3BGRL (ENSBIXG00005023836) #20 HMGN5 (ENSBIXG00005023866) #21 BRWD3 (ENSBIXG00005023949) #22 TENT5D (ENSBIXG00005024005) #24 TBX22 (ENSBIXG00005024042) #26 ENSBIXG00005024094 GPR174 (ENSBIXG00005005599) #28 ENSBIXG00005024140 P2RY10 (ENSBIXG00005024150) #30 ENSBIXG00005024189 CYSLTR1 (ENSBIXG00005024205) #34 ENSBIXG00005024230 ENSBIXG00005024310 #35 TAF9B (ENSBIXG00005024355) #37 PGK1 (ENSBIXG00005024390) ATP7A (ENSBIXG00005024508) ENSBIXG00005024547 ENSBIXG00005004198 Cow DUPLICATION Cow MODERN SPECIES 177 APOOL (ENSBTAG00000021790) #11 ENSBTAG00000027867 #13 HDX (ENSBTAG00000051806) #15 ENSBTAG00000055024 RPS6KA6 (ENSBTAG00000002015) #16 ENSBTAG00000048589 CYLC1 (ENSBTAG00000047417) #17 POU3F4 (ENSBTAG00000015712) #18 ENSBTAG00000039066 ENSBTAG00000051658 ENSBTAG00000048206 #19 SH3BGRL (ENSBTAG00000010587) #20 ENSBTAG00000049971 HMGN5 (ENSBTAG00000001877) #21 ENSBTAG00000051240 #22 BRWD3 (ENSBTAG00000016230) #22 TENT5D (ENSBTAG00000045653) #24 TBX22 (ENSBTAG00000048060) #26 ENSBTAG00000045678 GPR174 (ENSBTAG00000021437) #28 ENSBTAG00000054002 ENSBTAG00000050883 P2RY10 (ENSBTAG00000008555) #30 LPAR4 (ENSBTAG00000003299) #31 ENSBTAG00000035882 CYSLTR1 (ENSBTAG00000024675) #34 ENSBTAG00000051877 ENSBTAG00000026025 #35 TAF9B (ENSBTAG00000000895) #37 PGK1 (ENSBTAG00000000894) ATP7A (ENSBTAG00000010018) Cow MODERN SPECIES 177 ENSBTAG00000013077 #10 APOOL (ENSBTAG00000021790) #11 ENSBTAG00000027867 #13 HDX (ENSBTAG00000051806) #15 ENSBTAG00000055024 RPS6KA6 (ENSBTAG00000002015) #16 ENSBTAG00000048589 CYLC1 (ENSBTAG00000047417) #17 POU3F4 (ENSBTAG00000015712) #18 ENSBTAG00000039066 ENSBTAG00000051658 ENSBTAG00000048206 #19 SH3BGRL (ENSBTAG00000010587) #20 ENSBTAG00000049971 HMGN5 (ENSBTAG00000001877) #21 ENSBTAG00000051240 #22 BRWD3 (ENSBTAG00000016230) #22 TENT5D (ENSBTAG00000045653) #24 TBX22 (ENSBTAG00000048060) #26 ENSBTAG00000045678 GPR174 (ENSBTAG00000021437) #28 ENSBTAG00000054002 ENSBTAG00000050883 P2RY10 (ENSBTAG00000008555) #30 LPAR4 (ENSBTAG00000003299) #31 ENSBTAG00000035882 CYSLTR1 (ENSBTAG00000024675) #34 ENSBTAG00000051877 ENSBTAG00000026025 #35 TAF9B (ENSBTAG00000000895) #37 PGK1 (ENSBTAG00000000894) Cetacea ANCESTRAL SPECIES 19 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.a.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000159568 ENSGT00390000012178.g.b.a.a ENSGT00390000012030.b.a ENSGT00940000155902 Odontoceti ANCESTRAL SPECIES 19 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.a.a #11 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000164489 ENSGT00940000159568 ENSGT00980000203089 ENSGT00390000012178.g.b.a.a Odontoceti_a ANCESTRAL SPECIES 28 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.a.a #11 ENSGT00390000008591 #15 ENSGT00390000005534.b.b.d ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000164489 ENSGT00940000159568 ENSGT00980000203089 ENSGT00390000012178.g.b.a.a Odontoceti_b ANCESTRAL SPECIES 17 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.a.a #11 ENSGT00390000008591 #15 ENSGT00390000005534.b.b.d ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00390000002517.a.a.c.b ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000164489 ENSGT01090000260912.A ENSGT00940000159568 ENSGT00980000203089 Monodontidae ANCESTRAL SPECIES 19 ENSGT00390000001134.b ENSGT00950000182994.A.n.a ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a.a.a #11 ENSGT00390000008591 #15 ENSGT00390000005534.b.b.d ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT01010000229653 ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00940000163808 #32 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000164489 ENSGT01090000260912.A ENSGT00940000159568 ENSGT00390000012178.g.b.a.a Beluga whale MODERN SPECIES 15 CHM (ENSDLEG00000000210) POF1B (ENSDLEG00000000273) #7 ENSDLEG00000000305 ZNF711 (ENSDLEG00000000338) #8 ENSDLEG00000000411 #11 ENSDLEG00000000533 #13 HDX (ENSDLEG00000000563) #15 RPS6KA6 (ENSDLEG00000000947) #16 ENSDLEG00000002260 POU3F4 (ENSDLEG00000002267) #18 ENSDLEG00000002271 ENSDLEG00000002284 SH3BGRL (ENSDLEG00000002296) #20 ENSDLEG00000002316 ENSDLEG00000002320 BRWD3 (ENSDLEG00000002333) #22 ENSDLEG00000002366 FAM46D (ENSDLEG00000002371) #24 ENSDLEG00000002378 #25 TBX22 (ENSDLEG00000002390) #26 ITM2A (ENSDLEG00000002408) #27 GPR174 (ENSDLEG00000002420) #28 ENSDLEG00000002427 #29 P2RY10 (ENSDLEG00000002430) #30 LPAR4 (ENSDLEG00000002433) #31 RTL3 (ENSDLEG00000002439) #32 TAF9B (ENSDLEG00000002449) #37 PGK1 (ENSDLEG00000002462) ENSDLEG00000002472 ENSDLEG00000002475 ATP7A (ENSDLEG00000002484) Narwhal MODERN SPECIES 309 ENSMMNG00015009712 #10 ENSMMNG00015009704 #11 ENSMMNG00015009686 #13 HDX (ENSMMNG00015009669) #15 ENSMMNG00015009659 RPS6KA6 (ENSMMNG00015009638) #16 ENSMMNG00015009625 ENSMMNG00015009619 ENSMMNG00015009610 #19 SH3BGRL (ENSMMNG00015009604) #20 ENSMMNG00015009599 HMGN5 (ENSMMNG00015009591) #21 ENSMMNG00015009582 ENSMMNG00015009579 ENSMMNG00015009577 BRWD3 (ENSMMNG00015009554) #22 TENT5D (ENSMMNG00015009540) #24 ENSMMNG00015009536 TBX22 (ENSMMNG00015009523) #26 ENSMMNG00015009510 ITM2A (ENSMMNG00015009496) #27 ENSMMNG00015009482 #29 P2RY10 (ENSMMNG00015009475) #30 LPAR4 (ENSMMNG00015009468) #31 RTL3 (ENSMMNG00015009461) #32 TAF9B (ENSMMNG00015009451) #37 PGK1 (ENSMMNG00015009442) ENSMMNG00015009432 ATP7A (ENSMMNG00015009419) ENSMMNG00015009397 MAGT1 (ENSMMNG00015009385) Vaquita MODERN SPECIES 34 CHM (ENSPSNG00000016502) ENSPSNG00000016452 POF1B (ENSPSNG00000016065) #7 ZNF711 (ENSPSNG00000015952) #8 ENSPSNG00000015761 #9 ENSPSNG00000015676 #10 APOOL (ENSPSNG00000015621) #11 HDX (ENSPSNG00000015468) #15 RPS6KA6 (ENSPSNG00000014893) #16 POU3F4 (ENSPSNG00000014834) #18 ENSPSNG00000014813 #19 SH3BGRL (ENSPSNG00000014759) #20 ENSPSNG00000014737 ENSPSNG00000014508 ENSPSNG00000014459 BRWD3 (ENSPSNG00000014395) #22 TENT5D (ENSPSNG00000014369) #24 TBX22 (ENSPSNG00000014253) #26 ITM2A (ENSPSNG00000014072) #27 GPR174 (ENSPSNG00000014042) #28 ENSPSNG00000013978 #29 P2RY10 (ENSPSNG00000013950) #30 LPAR4 (ENSPSNG00000013916) #31 RTL3 (ENSPSNG00000013887) #32 TAF9B (ENSPSNG00000013833) #37 PGK1 (ENSPSNG00000013773) ENSPSNG00000013679 ENSPSNG00000013610 ATP7A (ENSPSNG00000013495) ENSPSNG00000021803 ENSPSNG00000021781 Dolphin MODERN SPECIES 1587 BRWD3 (ENSTTRG00000008954) #22 Sperm whale MODERN SPECIES 13 ZNF711 (ENSPCTG00005018257) #8 ENSPCTG00005018213 #9 ENSPCTG00005018126 #10 APOOL (ENSPCTG00005018097) #11 ENSPCTG00005018057 ENSPCTG00005018003 #13 HDX (ENSPCTG00005017842) #15 RPS6KA6 (ENSPCTG00005017401) #16 POU3F4 (ENSPCTG00005017365) #18 ENSPCTG00005017351 ENSPCTG00005017342 ENSPCTG00005017278 #19 SH3BGRL (ENSPCTG00005017239) #20 ENSPCTG00005017210 HMGN5 (ENSPCTG00005017184) #21 BRWD3 (ENSPCTG00005016926) #22 TENT5D (ENSPCTG00005016891) #24 ENSPCTG00005016832 ENSPCTG00005016800 #25 TBX22 (ENSPCTG00005016705) #26 ITM2A (ENSPCTG00005016548) #27 GPR174 (ENSPCTG00005016529) #28 ENSPCTG00005016517 #29 P2RY10 (ENSPCTG00005016500) #30 LPAR4 (ENSPCTG00005016476) #31 TAF9B (ENSPCTG00005016200) #37 PGK1 (ENSPCTG00005016156) ENSPCTG00005016116 ATP7A (ENSPCTG00005016014) ENSPCTG00005015993 ENSPCTG00005015887 Blue whale MODERN SPECIES 40 DACH2 (ENSBMSG00010017134) ENSBMSG00010017064 ENSBMSG00010017049 ZNF711 (ENSBMSG00010016976) #8 ENSBMSG00010016944 #9 APOOL (ENSBMSG00010016918) #11 ENSBMSG00010016890 #13 HDX (ENSBMSG00010016834) #15 ENSBMSG00010016817 RPS6KA6 (ENSBMSG00010016590) #16 POU3F4 (ENSBMSG00010016551) #18 ENSBMSG00010016538 ENSBMSG00010016527 SH3BGRL (ENSBMSG00010016502) #20 ENSBMSG00010016435 ENSBMSG00010016407 #22 ENSBMSG00010016362 TBX22 (ENSBMSG00010016318) #26 ITM2A (ENSBMSG00010016249) #27 GPR174 (ENSBMSG00010016108) #28 LPAR4 (ENSBMSG00010021050) #31 TAF9B (ENSBMSG00010021035) #37 PGK1 (ENSBMSG00010021023) ENSBMSG00010021016 ATP7A (ENSBMSG00010020999) ENSBMSG00010020983 MAGT1 (ENSBMSG00010020956) ATRX (ENSBMSG00010020930) FGF16 (ENSBMSG00010020906) PBDC1 (ENSBMSG00010020886) MAGEE2 (ENSBMSG00010020865) Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183107.a.b.b #22 Hedgehog MODERN SPECIES 5944 BRWD3 (ENSEEUG00000015319) #22 Common shrew MODERN SPECIES 4620 BRWD3 (ENSSARG00000010796) #22 Atlantogenata ANCESTRAL SPECIES 61 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT01030000235438 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT01000000215268 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.a.a #29 ENSGT01030000234518.D #28 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 ENSGT00940000159568 ENSGT00390000012178.g Xenarthra ANCESTRAL SPECIES 1900 ENSGT00950000183107.a.b.b #22 ENSGT01000000215268 Armadillo MODERN SPECIES 4184 ENSDNOG00000040467 FPGT (ENSDNOG00000049098) TNNI3K (ENSDNOG00000005238) ENSDNOG00000033011 ENSDNOG00000038593 ENSDNOG00000016614 TYW3 (ENSDNOG00000033863) BRWD3 (ENSDNOG00000009169) #22 ENSDNOG00000045095 Afrotheria ANCESTRAL SPECIES 71 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT01030000235438 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT01000000215268 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 ENSGT00940000159568 ENSGT00390000012178.g ENSGT00390000012030.b.a Tenrec MODERN SPECIES 5762 BRWD3 (ENSETEG00000004092) #22 Afrotheria_a ANCESTRAL SPECIES 70 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT01030000235438 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000156017 #20 ENSGT00730000111570 #21 ENSGT00950000183107.a.b.b #22 ENSGT01000000215268 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000161697 #37 ENSGT00390000008820.e.b ENSGT00940000163576 ENSGT00940000159568 ENSGT00390000012178.g ENSGT00390000012030.b.a Hyrax MODERN SPECIES 4878 ENSPCAG00000015671 #22 Elephant MODERN SPECIES 251 CHM (ENSLAFG00000000523) POF1B (ENSLAFG00000009185) #7 ZNF711 (ENSLAFG00000008864) #8 ENSLAFG00000002972 #10 APOOL (ENSLAFG00000008844) #11 ENSLAFG00000028905 #12 ENSLAFG00000032687 ENSLAFG00000031687 #13 HDX (ENSLAFG00000028655) #15 RPS6KA6 (ENSLAFG00000007777) #16 ENSLAFG00000027489 POU3F4 (ENSLAFG00000015688) #18 ENSLAFG00000026530 SH3BGRL (ENSLAFG00000011746) #20 ENSLAFG00000017956 #21 BRWD3 (ENSLAFG00000002711) #22 ENSLAFG00000032363 TENT5D (ENSLAFG00000027086) #24 ENSLAFG00000026457 #25 TBX22 (ENSLAFG00000001881) #26 ITM2A (ENSLAFG00000009973) #27 ENSLAFG00000025887 #29 P2RY10 (ENSLAFG00000017615) #30 LPAR4 (ENSLAFG00000008857) #31 CYSLTR1 (ENSLAFG00000022602) #34 TAF9B (ENSLAFG00000011956) #37 PGK1 (ENSLAFG00000011954) ENSLAFG00000025903 ATP7A (ENSLAFG00000020866) COX7B (ENSLAFG00000022996) MAGT1 (ENSLAFG00000012886) Marsupialia ANCESTRAL SPECIES 36 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00940000163653.b ENSGT00530000064086.q ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075 #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b.uc #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097.a ENSGT00390000008820.e.a ENSGT00950000183593 ENSGT00940000159568 Marsupialia_b ANCESTRAL SPECIES 32 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00940000163653.b ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00530000064086.q ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00730000111075 #17 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b.uc #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097.a ENSGT00390000008820.e.a ENSGT00940000163576 ENSGT00940000159568 Diprotodontia ANCESTRAL SPECIES 72 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00940000163653.b ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00530000064086.q ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b.uc #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097.a ENSGT00390000008820.e.a ENSGT00940000163576 ENSGT00940000159568 Diprotodontia_a ANCESTRAL SPECIES 69 ENSGT00940000157978.g ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00940000163653.b ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00530000064086.q ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b.uc #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.a #29 ENSGT01100000263536.A.a.a.b #30 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097.a ENSGT00390000008820.e.a.g ENSGT00940000163576 ENSGT00940000159568 koala MODERN SPECIES 153 ENSPCIG00000002575 ENSPCIG00000034179 POF1B (ENSPCIG00000002558) #7 ZNF711 (ENSPCIG00000002535) #8 ENSPCIG00000002492 ENSPCIG00000032809 ENSPCIG00000002457 ENSPCIG00000036766 ENSPCIG00000011754 HDX (ENSPCIG00000018657) #15 RPS6KA6 (ENSPCIG00000018480) #16 POU3F4 (ENSPCIG00000018483) #18 ENSPCIG00000034797 ENSPCIG00000021957 SH3BGRL (ENSPCIG00000021959) #20 BRWD3 (ENSPCIG00000021973) #22 TENT5D (ENSPCIG00000007683) #24 ENSPCIG00000007686 #25 TBX22 (ENSPCIG00000007687) #26 ITM2A (ENSPCIG00000007691) #27 ENSPCIG00000007693 ##29 ENSPCIG00000007694 #29 P2RY10 (ENSPCIG00000007695) #30 LPAR4 (ENSPCIG00000036415) #31 ENSPCIG00000007698 #33 CYSLTR1 (ENSPCIG00000028506) #34 ENSPCIG00000026996 #35 ENSPCIG00000026916 ENSPCIG00000026908 ENSPCIG00000026914 ATP7A (ENSPCIG00000026898) Common wonbat MODERN SPECIES 256 ZNF711 (ENSVURG00010013096) #8 ENSVURG00010013087 ENSVURG00010013055 #10 APOOL (ENSVURG00010013044) #11 ENSVURG00010013030 ENSVURG00010013025 ENSVURG00010013008 HDX (ENSVURG00010012997) #15 RPS6KA6 (ENSVURG00010012986) #16 POU3F4 (ENSVURG00010012952) #18 ENSVURG00010012946 ENSVURG00010012938 ENSVURG00010012935 #19 SH3BGRL (ENSVURG00010012931) #20 ENSVURG00010012917 BRWD3 (ENSVURG00010010949) #22 ENSVURG00010010850 TENT5D (ENSVURG00010010847) #24 ENSVURG00010010827 #25 TBX22 (ENSVURG00010010806) #26 ENSVURG00010010796 ITM2A (ENSVURG00010010753) #27 ENSVURG00010010742 ##29 ENSVURG00010010739 #29 P2RY10 (ENSVURG00010010733) #30 LPAR4 (ENSVURG00010010729) #31 ENSVURG00010010723 #33 CYSLTR1 (ENSVURG00010010720) #34 ENSVURG00010006043 #35 ENSVURG00010005813 ENSVURG00010005765 Wallaby MODERN SPECIES 7174 BRWD3 (ENSMEUG00000013907) #22 Tasmanian devil MODERN SPECIES 21 ZNF711 (ENSSHAG00000017110) #8 ENSSHAG00000021606 ENSSHAG00000030190 #10 ENSSHAG00000016737 #11 ENSSHAG00000030965 ENSSHAG00000015306 ENSSHAG00000029424 HDX (ENSSHAG00000014376) #15 RPS6KA6 (ENSSHAG00000013276) #16 ENSSHAG00000013212 #17 POU3F4 (ENSSHAG00000028260) #18 ENSSHAG00000024526 ENSSHAG00000007416 ENSSHAG00000026737 #19 ENSSHAG00000006740 #20 BRWD3 (ENSSHAG00000017788) #22 TENT5D (ENSSHAG00000030992) #24 ENSSHAG00000016903 #25 TBX22 (ENSSHAG00000031949) #26 ITM2A (ENSSHAG00000023986) #27 GPR174 (ENSSHAG00000020632) #28 ENSSHAG00000023574 #29 P2RY10 (ENSSHAG00000028613) #30 ENSSHAG00000026487 #31 ENSSHAG00000014281 #33 CYSLTR1 (ENSSHAG00000013758) #34 ENSSHAG00000013267 #35 ENSSHAG00000023354 ENSSHAG00000001853 ENSSHAG00000022184 ENSSHAG00000012787 Opossum MODERN SPECIES 627 ENSMODG00000017486 ENSMODG00000025187 ENSMODG00000049110 ENSMODG00000017482 ENSMODG00000017480 ENSMODG00000025190 ENSMODG00000017473 ENSMODG00000044797 ENSMODG00000029644 ENSMODG00000017465 ENSMODG00000025192 ENSMODG00000017423 ENSMODG00000027595 ENSMODG00000022861 SH3BGRL (ENSMODG00000004322) #20 BRWD3 (ENSMODG00000004308) #22 ENSMODG00000014584 #24 ENSMODG00000004273 #25 TBX22 (ENSMODG00000004255) #26 ENSMODG00000043255 ENSMODG00000043149 ENSMODG00000004233 #27 GPR174 (ENSMODG00000022863) #28 ENSMODG00000004214 #29 LPAR4 (ENSMODG00000022866) #31 ENSMODG00000045736 #33 CYSLTR1 (ENSMODG00000004207) #34 ENSMODG00000004142 #35 ENSMODG00000004077 ENSMODG00000004055 ENSMODG00000028942 Platypus MODERN SPECIES 17 ENSOANG00000041968 ENSOANG00000008969 ENSOANG00000004328 CHM (ENSOANG00000007635) POF1B (ENSOANG00000039584) #7 ZNF711 (ENSOANG00000047231) #8 ENSOANG00000040338 #9 ENSOANG00000007647 #10 APOOL (ENSOANG00000048854) #11 ENSOANG00000041721 HDX (ENSOANG00000041527) #15 RPS6KA6 (ENSOANG00000005406) #16 POU3F4 (ENSOANG00000002241) #18 ENSOANG00000040877 ENSOANG00000040557 #20 BRWD3 (ENSOANG00000043415) #22 ENSOANG00000051162 #24 CHMP1B (ENSOANG00000022451) #25 TBX22 (ENSOANG00000040270) #26 ITM2A (ENSOANG00000007068) #27 GPR174 (ENSOANG00000046748) #28 ENSOANG00000040101 #30 ENSOANG00000038812 #30 LPAR4 (ENSOANG00000040303) #31 CYSLTR1 (ENSOANG00000047424) #34 ENSOANG00000011910 #35 ENSOANG00000042180 ENSOANG00000046779 LRCH2 (ENSOANG00000007419) ENSOANG00000042091 ENSOANG00000012718 Sauria ANCESTRAL SPECIES 21 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT01100000263484.C.a.k ENSGT00940000155097 ENSGT00940000158195 Lepidosauria ANCESTRAL SPECIES 41 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT01100000263484.C.a.k ENSGT00940000155097 ENSGT00940000158195 ENSGT00940000153222.a.b.b.b.b tuatara DUPLICATION tuatara MODERN SPECIES 1879 ENSSPUG00000007774 SH3BGRL (ENSSPUG00000007763) #20 ENSSPUG00000007757 ENSSPUG00000007742 #22 ENSSPUG00000007695 #22 ENSSPUG00000007683 tuatara MODERN SPECIES 1879 ENSSPUG00000007774 SH3BGRL (ENSSPUG00000007763) #20 ENSSPUG00000007757 ENSSPUG00000007742 #22 ENSSPUG00000007695 #22 ENSSPUG00000007683 Episquamata ANCESTRAL SPECIES 14 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237.`b ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00940000156837.w ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT01100000263484.C.a.k ENSGT00940000157424 ENSGT00510000047611 Laterata ANCESTRAL SPECIES 31 ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237.`b ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00960000189950 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00940000156837.w ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT01100000263484.C.a.k ENSGT00940000157424 ENSGT00510000047611 Argentine black and white tegu MODERN SPECIES 75 ENSSMRG00000008459 POF1B (ENSSMRG00000008469) #7 ZNF711 (ENSSMRG00000008476) #8 ENSSMRG00000008481 #10 APOOL (ENSSMRG00000008484) #11 ENSSMRG00000008499 ENSSMRG00000008508 HDX (ENSSMRG00000008512) #15 RPS6KA6 (ENSSMRG00000008523) #16 POU3F4 (ENSSMRG00000008536) #18 ENSSMRG00000008539 ENSSMRG00000008541 ENSSMRG00000008543 #19 SH3BGRL (ENSSMRG00000008544) #20 ENSSMRG00000008553 BRWD3 (ENSSMRG00000008563) #22 ENSSMRG00000009214 TENT5D (ENSSMRG00000009218) #24 ENSSMRG00000009220 CHMP1B (ENSSMRG00000009221) #25 TBX22 (ENSSMRG00000009224) #26 ITM2A (ENSSMRG00000009226) #27 ENSSMRG00000009227 ##29 ENSSMRG00000009228 #29 ENSSMRG00000009229 #29 LPAR4 (ENSSMRG00000009231) #31 ENSSMRG00000009232 ENSSMRG00000009234 #35 ENSSMRG00000009235 ENSSMRG00000009243 RAB41 (ENSSMRG00000009244) Common wall lizard MODERN SPECIES 419 APOOL (ENSPMRG00000020173) #11 ENSPMRG00000020137 HDX (ENSPMRG00000020114) #15 ENSPMRG00000020105 RPS6KA6 (ENSPMRG00000019568) #16 POU3F4 (ENSPMRG00000019451) #18 ENSPMRG00000019446 ENSPMRG00000019435 ENSPMRG00000019426 ENSPMRG00000019420 #19 ENSPMRG00000019416 ENSPMRG00000019404 SH3BGRL (ENSPMRG00000019393) #20 ENSPMRG00000019385 ENSPMRG00000019373 BRWD3 (ENSPMRG00000019228) #22 ENSPMRG00000019214 TENT5D (ENSPMRG00000019209) #24 ENSPMRG00000019205 ENSPMRG00000019198 #25 ENSPMRG00000019188 #25 TBX22 (ENSPMRG00000019179) #26 ITM2A (ENSPMRG00000019174) #27 ENSPMRG00000019169 ##29 ENSPMRG00000019160 #29 ENSPMRG00000019156 #29 LPAR4 (ENSPMRG00000020204) #31 CYSLTR1 (ENSPMRG00000020201) #34 ENSPMRG00000020178 #35 ENSPMRG00000020171 ENSPMRG00000020166 Toxicofera ANCESTRAL SPECIES 17 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237.ab ENSGT00940000164237.`b ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00940000156837.w ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00990000203619.B ENSGT00940000163592 #35 ENSGT01100000263484.C.a.k ENSGT00510000047611 ENSGT00940000163684 Elapidae ANCESTRAL SPECIES 14 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237.ab ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00940000156837.w ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00990000203619.B ENSGT00940000163592 #35 ENSGT00510000047611 ENSGT00940000163684 ENSGT01030000234566.e.b.b.b Elapidae_a ANCESTRAL SPECIES 30 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00990000205517 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237.`b ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00960000189950 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00940000156837.w ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00990000203619.B ENSGT00940000163592 #35 ENSGT00510000047611 ENSGT00940000163684 ENSGT01030000234566.e.b.b.b Acanthophiinae ANCESTRAL SPECIES 20 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00990000205517 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237.`b ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00940000156837.w ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00990000203619.B ENSGT00940000163592 #35 ENSGT00510000047611 ENSGT01030000234566.e.b.b.b ENSGT00940000157297.i Mainland tiger snake MODERN SPECIES 64 ENSNSUG00000020637 POF1B (ENSNSUG00000020636) #7 ZNF711 (ENSNSUG00000020635) #8 ENSNSUG00000020634 ENSNSUG00000020633 #10 ENSNSUG00000020631 HDX (ENSNSUG00000020630) #15 RPS6KA6 (ENSNSUG00000020629) #16 POU3F4 (ENSNSUG00000020628) #18 ENSNSUG00000020627 ENSNSUG00000020626 ENSNSUG00000020625 #19 ENSNSUG00000020624 SH3BGRL (ENSNSUG00000020623) #20 ENSNSUG00000020622 BRWD3 (ENSNSUG00000020621) #22 ENSNSUG00000020620 TENT5D (ENSNSUG00000020619) #24 ERCC6L (ENSNSUG00000020618) TBX22 (ENSNSUG00000020617) #26 ITM2A (ENSNSUG00000020616) #27 ENSNSUG00000020615 ##29 ENSNSUG00000020614 #29 ENSNSUG00000020613 #29 LPAR4 (ENSNSUG00000020612) #31 ENSNSUG00000020611 ENSNSUG00000020610 #35 ENSNSUG00000020609 ENSNSUG00000020608 TENM1 (ENSNSUG00000020607) ENSNSUG00000020606 Eastern brown snake MODERN SPECIES 20 ENSPTXG00000004640 POF1B (ENSPTXG00000004728) #7 ZNF711 (ENSPTXG00000004741) #8 ENSPTXG00000004745 #10 APOOL (ENSPTXG00000004749) #11 ENSPTXG00000004751 ENSPTXG00000004753 HDX (ENSPTXG00000004754) #15 RPS6KA6 (ENSPTXG00000004755) #16 ENSPTXG00000004757 ENSPTXG00000004758 ENSPTXG00000004760 #19 ENSPTXG00000004761 SH3BGRL (ENSPTXG00000004762) #20 ENSPTXG00000004763 BRWD3 (ENSPTXG00000004804) #22 ENSPTXG00000004968 TENT5D (ENSPTXG00000004972) #24 ENSPTXG00000004973 CHMP1B (ENSPTXG00000004975) #25 ITM2A (ENSPTXG00000004976) #27 ENSPTXG00000004977 ##29 ENSPTXG00000004978 #29 LPAR4 (ENSPTXG00000004980) #31 ENSPTXG00000004981 ENSPTXG00000004988 #35 ENSPTXG00000007751 ENSPTXG00000007752 TENM1 (ENSPTXG00000007753) ENSPTXG00000007759 ENSPTXG00000008851 Blue-lipped sea krait MODERN SPECIES 5372 BRWD3 (ENSLLTG00000004876) #22 Indian cobra MODERN SPECIES 13 ZNF711 (ENSNNAG00000010263) #8 ENSNNAG00000010213 #9 ENSNNAG00000010176 #10 APOOL (ENSNNAG00000010158) #11 ENSNNAG00000018865 HDX (ENSNNAG00000018861) #15 RPS6KA6 (ENSNNAG00000018764) #16 ENSNNAG00000018731 #18 ENSNNAG00000018723 #18 ENSNNAG00000018717 ENSNNAG00000018713 ENSNNAG00000018709 #19 ENSNNAG00000018705 ENSNNAG00000018703 SH3BGRL (ENSNNAG00000018699) #20 BRWD3 (ENSNNAG00000018367) #22 ENSNNAG00000018272 ENSNNAG00000018270 ENSNNAG00000018269 TENT5D (ENSNNAG00000018267) #24 ENSNNAG00000018260 ENSNNAG00000018257 CHMP1B (ENSNNAG00000018251) #25 TBX22 (ENSNNAG00000018243) #26 ITM2A (ENSNNAG00000018239) #27 ENSNNAG00000018238 ##29 ENSNNAG00000018236 #29 ENSNNAG00000018232 #29 LPAR4 (ENSNNAG00000018229) #31 ENSNNAG00000018225 ENSNNAG00000017641 #35 Lizard MODERN SPECIES 1422 ENSACAG00000008361 #22 ENSACAG00000026082 ENSACAG00000011230 #24 Archelosauria ANCESTRAL SPECIES 24 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT01100000263484.C.a.k ENSGT00940000155097 ENSGT00940000158195 Archosauria ANCESTRAL SPECIES 15 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT01040000244695 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT01100000263484.C.a.k ENSGT00940000155097 ENSGT00940000158195 Aves ANCESTRAL SPECIES 23 ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT01040000244695 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT01100000263484.C.a.k ENSGT00940000155097 ENSGT00940000158195 African ostrich MODERN SPECIES 1060 TAF7 (ENSSCUG00000019126) ENSSCUG00000019125 BTK (ENSSCUG00000019124) ENSSCUG00000019123 GLA (ENSSCUG00000019122) RAB9B (ENSSCUG00000019121) ENSSCUG00000019120 ENSSCUG00000019119 FRMPD3 (ENSSCUG00000019118) RPS6KA6 (ENSSCUG00000019117) #16 ENSSCUG00000019115 #18 ENSSCUG00000019111 ENSSCUG00000019110 ENSSCUG00000019108 #19 SH3BGRL (ENSSCUG00000019106) #20 BRWD3 (ENSSCUG00000019103) #22 ENSSCUG00000019102 TENT5D (ENSSCUG00000019101) #24 CHMP1B (ENSSCUG00000019100) #25 ITM2A (ENSSCUG00000019099) #27 ENSSCUG00000019097 ##29 ENSSCUG00000019095 #29 ENSSCUG00000019094 #29 LPAR4 (ENSSCUG00000019093) #31 ENSSCUG00000019092 #33 CYSLTR1 (ENSSCUG00000019090) #34 ENSSCUG00000019088 #35 ENSSCUG00000019087 TAF9 (ENSSCUG00000019086) KIF4A (ENSSCUG00000019085) PDZD11 (ENSSCUG00000019084) Neognathae ANCESTRAL SPECIES 22 ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT01040000244695 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT01100000263484.C.a.k ENSGT00940000155097 ENSGT00940000158195 Neognathae_b ANCESTRAL SPECIES ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT01040000244695 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT01100000263484.C.a.k ENSGT00940000155097 ENSGT00940000158195 Passeriformes ANCESTRAL SPECIES 24 ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT01040000244695 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097 ENSGT00940000158195 ENSGT00940000153222.a.b.b.b.b Great tit MODERN SPECIES 24 ENSPMJG00000004500 KLHL4 (ENSPMJG00000004550) DACH2 (ENSPMJG00000004572) ENSPMJG00000004621 POF1B (ENSPMJG00000004629) #7 ZNF711 (ENSPMJG00000004632) #8 ENSPMJG00000004635 #9 APOOL (ENSPMJG00000004639) #11 ENSPMJG00000004654 HDX (ENSPMJG00000004669) #15 RPS6KA6 (ENSPMJG00000004676) #16 ENSPMJG00000004715 ENSPMJG00000004717 ENSPMJG00000004731 #19 SH3BGRL (ENSPMJG00000004732) #20 BRWD3 (ENSPMJG00000004797) #22 ENSPMJG00000007839 TENT5D (ENSPMJG00000007841) #24 CHMP1B (ENSPMJG00000007843) #25 TBX22 (ENSPMJG00000007845) #26 ITM2A (ENSPMJG00000007846) #27 ENSPMJG00000007847 ##29 ENSPMJG00000007848 #29 ENSPMJG00000007849 #29 LPAR4 (ENSPMJG00000007890) #31 ENSPMJG00000007891 #33 CYSLTR1 (ENSPMJG00000007892) #34 ENSPMJG00000007893 #35 TAF9 (ENSPMJG00000007895) KIF4A (ENSPMJG00000007896) PDZD11 (ENSPMJG00000007900) Passeriformes_d ANCESTRAL SPECIES 27 ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT01040000244695 ENSGT00950000183107.a.b.b #22 ENSGT00950000185117 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c.b #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097 ENSGT00940000158195 ENSGT00940000153222.a.b.b.b.b Flycatcher MODERN SPECIES 23 DACH2 (ENSFALG00000003987) ENSFALG00000003994 ZNF711 (ENSFALG00000004005) #8 ENSFALG00000023605 #9 APOOL (ENSFALG00000028762) #11 ENSFALG00000004029 HDX (ENSFALG00000004050) #15 RPS6KA6 (ENSFALG00000004051) #16 POU3F4 (ENSFALG00000028949) #18 ENSFALG00000027532 ENSFALG00000004060 ENSFALG00000014855 #19 SH3BGRL (ENSFALG00000026799) #20 ENSFALG00000004069 ENSFALG00000026282 BRWD3 (ENSFALG00000004071) #22 TENT5D (ENSFALG00000014872) #24 ENSFALG00000026579 #25 ENSFALG00000024560 TBX22 (ENSFALG00000004082) #26 ITM2A (ENSFALG00000004086) #27 ENSFALG00000014887 ##29 ENSFALG00000014911 #29 ENSFALG00000028860 #29 LPAR4 (ENSFALG00000014923) #31 ENSFALG00000004092 #33 CYSLTR1 (ENSFALG00000014944) #34 ENSFALG00000004101 #35 ENSFALG00000004104 ENSFALG00000025082 ENSFALG00000004108 Passeriformes_g ANCESTRAL SPECIES 28 ENSGT00390000001134.b.e ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT00950000185117 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c.b #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097 ENSGT00940000158195 ENSGT00940000153222.a.b.b.b.b Medium ground finch MODERN SPECIES 52 ENSGFOG00000012864 KLHL4 (ENSGFOG00000012871) DACH2 (ENSGFOG00000012878) ENSGFOG00000012883 ZNF711 (ENSGFOG00000012889) #8 ENSGFOG00000012892 APOOL (ENSGFOG00000012895) #11 ENSGFOG00000012899 HDX (ENSGFOG00000012900) #15 RPS6KA6 (ENSGFOG00000012903) #16 ENSGFOG00000012906 ENSGFOG00000012907 ENSGFOG00000012909 #19 SH3BGRL (ENSGFOG00000012912) #20 ENSGFOG00000012914 BRWD3 (ENSGFOG00000012945) #22 TENT5D (ENSGFOG00000013151) #24 CHMP1B (ENSGFOG00000013153) #25 ITM2A (ENSGFOG00000013161) #27 ENSGFOG00000000009 ##29 ENSGFOG00000000021 #29 ENSGFOG00000000038 #29 LPAR4 (ENSGFOG00000000040) #31 ENSGFOG00000000156 #33 CYSLTR1 (ENSGFOG00000000160) #34 ENSGFOG00000000169 #35 TAF9 (ENSGFOG00000000188) KIF4A (ENSGFOG00000000195) ENSGFOG00000000221 RAB41 (ENSGFOG00000000245) ARR3 (ENSGFOG00000000256) Passeroidea ANCESTRAL SPECIES 30 ENSGT00390000001134.b.e ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT00950000185117 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c.b #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097 ENSGT00940000158195 ENSGT00940000153222.a.b.b.b.b Common canary MODERN SPECIES 13 DACH2 (ENSSCAG00000002926) ENSSCAG00000002831 POF1B (ENSSCAG00000002819) #7 ZNF711 (ENSSCAG00000002807) #8 ENSSCAG00000002804 #9 APOOL (ENSSCAG00000002799) #11 ENSSCAG00000002792 ENSSCAG00000002788 ENSSCAG00000002778 HDX (ENSSCAG00000002764) #15 RPS6KA6 (ENSSCAG00000002754) #16 ENSSCAG00000002744 ENSSCAG00000002734 ENSSCAG00000002728 #19 SH3BGRL (ENSSCAG00000002723) #20 BRWD3 (ENSSCAG00000002422) #22 TENT5D (ENSSCAG00000002314) #24 CHMP1B (ENSSCAG00000002307) #25 TBX22 (ENSSCAG00000002292) #26 ITM2A (ENSSCAG00000002281) #27 ENSSCAG00000002271 ##29 ENSSCAG00000002265 #29 ENSSCAG00000002260 #29 LPAR4 (ENSSCAG00000002256) #31 ENSSCAG00000002255 #33 CYSLTR1 (ENSSCAG00000002248) #34 ENSSCAG00000001501 #35 TAF9 (ENSSCAG00000001200) KIF4A (ENSSCAG00000000955) PDZD11 (ENSSCAG00000000880) RAB41 (ENSSCAG00000000872) Zebra finch MODERN SPECIES 26 KLHL4 (ENSTGUG00000002398) DACH2 (ENSTGUG00000002423) ENSTGUG00000002437 POF1B (ENSTGUG00000002455) #7 ZNF711 (ENSTGUG00000002466) #8 APOOL (ENSTGUG00000002477) #11 ENSTGUG00000002481 HDX (ENSTGUG00000002499) #15 RPS6KA6 (ENSTGUG00000002510) #16 POU3F4 (ENSTGUG00000029753) #18 ENSTGUG00000002530 ENSTGUG00000002535 ENSTGUG00000002549 #19 SH3BGRL (ENSTGUG00000025391) #20 HMGN5 (ENSTGUG00000002555) BRWD3 (ENSTGUG00000002561) #22 ENSTGUG00000023809 TENT5D (ENSTGUG00000022810) #24 CHMP1B (ENSTGUG00000027356) #25 TBX22 (ENSTGUG00000002573) #26 ITM2A (ENSTGUG00000002582) #27 ENSTGUG00000026061 ##29 ENSTGUG00000018371 #29 ENSTGUG00000018478 #29 LPAR4 (ENSTGUG00000021204) #31 ENSTGUG00000021806 #33 CYSLTR1 (ENSTGUG00000024102) #34 ENSTGUG00000002593 #35 TAF9 (ENSTGUG00000002603) KIF4A (ENSTGUG00000002605) PDZD11 (ENSTGUG00000002616) Neognathae_c ANCESTRAL SPECIES 29 ENSGT00940000159818 ENSGT00390000001134.b.e ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT01100000263484.C.a.k ENSGT00940000155097 ENSGT00940000158195 Kakapo MODERN SPECIES 1 NXT2 (ENSSHBG00005008272) IRS4 (ENSSHBG00005008280) ENSSHBG00005008284 APOOL (ENSSHBG00005008299) #11 ENSSHBG00005008326 ENSSHBG00005008338 ENSSHBG00005000577 HDX (ENSSHBG00005000581) #15 RPS6KA6 (ENSSHBG00005000605) #16 POU3F4 (ENSSHBG00005000627) #18 ENSSHBG00005000632 ENSSHBG00005000633 ENSSHBG00005000635 #19 SH3BGRL (ENSSHBG00005000636) #20 ENSSHBG00005015209 BRWD3 (ENSSHBG00005015285) #22 ENSSHBG00005015777 TENT5D (ENSSHBG00005015785) #24 CHMP1B (ENSSHBG00005015790) #25 TBX22 (ENSSHBG00005015797) #26 ITM2A (ENSSHBG00005015802) #27 ENSSHBG00005015808 ##29 ENSSHBG00005015812 #29 ENSSHBG00005015815 #29 LPAR4 (ENSSHBG00005015821) #31 ENSSHBG00005015823 #33 CYSLTR1 (ENSSHBG00005015827) #34 ENSSHBG00005015829 #35 TAF9 (ENSSHBG00005015836) KIF4A (ENSSHBG00005015849) PDZD11 (ENSSHBG00005015864) Golden eagle MODERN SPECIES 13 DACH2 (ENSACCG00020016193) ENSACCG00020016178 POF1B (ENSACCG00020016158) #7 ZNF711 (ENSACCG00020016132) #8 ENSACCG00020016121 APOOL (ENSACCG00020016100) #11 ENSACCG00020016085 ENSACCG00020016065 HDX (ENSACCG00020016050) #15 RPS6KA6 (ENSACCG00020015923) #16 POU3F4 (ENSACCG00020015685) #18 ENSACCG00020015673 ENSACCG00020015657 ENSACCG00020015649 #19 SH3BGRL (ENSACCG00020015632) #20 BRWD3 (ENSACCG00020014046) #22 TENT5D (ENSACCG00020012234) #24 CHMP1B (ENSACCG00020012203) #25 TBX22 (ENSACCG00020012178) #26 ITM2A (ENSACCG00020012142) #27 ENSACCG00020012123 ##29 ENSACCG00020012110 #29 ENSACCG00020012089 #29 LPAR4 (ENSACCG00020012064) #31 ENSACCG00020012035 #33 CYSLTR1 (ENSACCG00020012023) #34 ENSACCG00020011979 #35 ENSACCG00020011916 TAF9 (ENSACCG00020011894) KIF4A (ENSACCG00020011701) PDZD11 (ENSACCG00020011488) Galloanserae ANCESTRAL SPECIES 21 ENSGT00390000001134.b.e ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097 ENSGT00940000158195 ENSGT00940000153222.a.b.b.b.b ENSGT00940000157424 Phasianidae ANCESTRAL SPECIES 2 ENSGT00390000001134.b.e ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237.cb ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000153904.b ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160971 ENSGT00940000162359 ENSGT00940000164188 ENSGT00940000159444 ENSGT00940000161201 ENSGT00940000155374 ENSGT00960000189674 ENSGT00940000160946 ENSGT00940000161952 ENSGT00940000160785 ENSGT00940000173950 Japanese quail MODERN SPECIES 22 DACH2 (ENSCJPG00005016472) ENSCJPG00005016473 POF1B (ENSCJPG00005016474) #7 ZNF711 (ENSCJPG00005016475) #8 APOOL (ENSCJPG00005016476) #11 ENSCJPG00005016477 ENSCJPG00005016478 HDX (ENSCJPG00005016479) #15 RPS6KA6 (ENSCJPG00005016480) #16 POU3F4 (ENSCJPG00005016482) #18 ENSCJPG00005016484 ENSCJPG00005016485 ENSCJPG00005016497 #19 SH3BGRL (ENSCJPG00005016498) #20 ENSCJPG00005016500 BRWD3 (ENSCJPG00005016501) #22 TENT5D (ENSCJPG00005016778) #24 ENSCJPG00005016779 ENSCJPG00005016780 CLCN5 (ENSCJPG00005016781) ENSCJPG00005016782 SLITRK4 (ENSCJPG00005016810) SOX3 (ENSCJPG00005016837) ENSCJPG00005016866 GABRA3 (ENSCJPG00005016868) GABRE (ENSCJPG00005016871) CNGA2 (ENSCJPG00005016882) ENSCJPG00005016883 PRRG3 (ENSCJPG00005016884) ENSCJPG00005016885 CLDN2 (ENSCJPG00005016886) Phasianidae_b ANCESTRAL SPECIES 24 ENSGT00390000001134.b.e ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237.cb ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT00940000162488 #24 ENSGT00940000153904.b ENSGT00940000153763.a ENSGT01070000253816.a.a.a ENSGT00940000160971 ENSGT00940000162359 ENSGT00940000164188 ENSGT00940000159444 ENSGT00940000161201 ENSGT00940000155374 ENSGT00940000160946 ENSGT00940000161952 ENSGT00940000160785 ENSGT00940000159186 ENSGT00940000157083 Chicken MODERN SPECIES 33 CHM (ENSGALG00010018244) POF1B (ENSGALG00010018283) #7 ZNF711 (ENSGALG00010018274) #8 ENSGALG00010018298 #9 APOOL (ENSGALG00010018310) #11 ENSGALG00010018325 ENSGALG00010019979 HDX (ENSGALG00010015449) #15 RPS6KA6 (ENSGALG00010015487) #16 POU3F4 (ENSGALG00010019346) #18 ENSGALG00010014250 ENSGALG00010014306 ENSGALG00010018947 #19 SH3BGRL (ENSGALG00010019018) #20 HMGN5 (ENSGALG00010019040) BRWD3 (ENSGALG00010019059) #22 FAM46D (ENSGALG00010019114) #24 ENSGALG00010019125 ENSGALG00010019158 CLCN5 (ENSGALG00010019227) TRAIL-LIKE (ENSGALG00010019260) SLITRK4 (ENSGALG00010019325) GABRQ (ENSGALG00010015078) GABRA3 (ENSGALG00010015087) GABRE (ENSGALG00010015096) CNGA2 (ENSGALG00010015104) CLDN2 (ENSGALG00010015115) PRRG3 (ENSGALG00010015129) RIPPLY1 (ENSGALG00010015135) ENSGALG00010015149 ENSGALG00010015169 Turkey MODERN SPECIES 29 KLHL4 (ENSMGAG00000004449) DACH2 (ENSMGAG00000004510) ENSMGAG00000004529 POF1B (ENSMGAG00000004600) #7 ZNF711 (ENSMGAG00000004634) #8 ENSMGAG00000020154 #9 APOOL (ENSMGAG00000004674) #11 ENSMGAG00000004696 ENSMGAG00000021569 HDX (ENSMGAG00000004732) #15 RPS6KA6 (ENSMGAG00000004748) #16 ENSMGAG00000004814 ENSMGAG00000004818 ENSMGAG00000015810 #19 SH3BGRL (ENSMGAG00000004838) #20 BRWD3 (ENSMGAG00000004860) #22 TENT5D (ENSMGAG00000015812) #24 ENSMGAG00000005007 ENSMGAG00000004934 ENSMGAG00000005027 ENSMGAG00000015814 ENSMGAG00000018856 ENSMGAG00000005045 GABRA3 (ENSMGAG00000005137) GABRE (ENSMGAG00000005194) CNGA2 (ENSMGAG00000005170) PRRG3 (ENSMGAG00000005238) ENSMGAG00000005246 ENSMGAG00000017674 TMLHE (ENSMGAG00000005254) ENSMGAG00000015816 Anatidae DUPLICATION Anatidae ANCESTRAL SPECIES 24 ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b.x #22 ENSGT00950000183107.a.b.b.w #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097 ENSGT00940000158195 ENSGT00940000153222.a.b.b.b.b ENSGT00950000182887.C.b.b Duck MODERN SPECIES 1 ENSAPLG00000006804 KLHL4 (ENSAPLG00000005695) DACH2 (ENSAPLG00000006115) ENSAPLG00000006258 POF1B (ENSAPLG00000007116) #7 ZNF711 (ENSAPLG00000007311) #8 ENSAPLG00000007414 #9 APOOL (ENSAPLG00000024832) #11 ENSAPLG00000007509 HDX (ENSAPLG00000007946) #15 RPS6KA6 (ENSAPLG00000008167) #16 ENSAPLG00000008654 ENSAPLG00000008781 SH3BGRL (ENSAPLG00000022802) #20 ENSAPLG00000019694 BRWD3 (ENSAPLG00000009512) #22 ENSAPLG00000028312 TENT5D (ENSAPLG00000011605) #24 CHMP1B (ENSAPLG00000010677) #25 TBX22 (ENSAPLG00000010929) #26 ITM2A (ENSAPLG00000011114) #27 ENSAPLG00000011296 ##29 ENSAPLG00000011608 #29 ENSAPLG00000011612 #29 LPAR4 (ENSAPLG00000001317) #31 ENSAPLG00000001322 #33 CYSLTR1 (ENSAPLG00000006621) #34 ENSAPLG00000008101 #35 TAF9 (ENSAPLG00000020242) KIF4A (ENSAPLG00000008191) PDZD11 (ENSAPLG00000021957) Pink-footed goose MODERN SPECIES 4 ENSABRG00000010897 POF1B (ENSABRG00000010810) #7 ZNF711 (ENSABRG00000010688) #8 ENSABRG00000010671 #9 APOOL (ENSABRG00000010661) #11 ENSABRG00000010619 HDX (ENSABRG00000010585) #15 RPS6KA6 (ENSABRG00000007374) #16 POU3F4 (ENSABRG00000007243) #18 ENSABRG00000007234 ENSABRG00000007228 ENSABRG00000007226 #19 SH3BGRL (ENSABRG00000007222) #20 ENSABRG00000007220 ENSABRG00000007216 #22 ENSABRG00000007196 #22 TENT5D (ENSABRG00000007191) #24 CHMP1B (ENSABRG00000007183) #25 TBX22 (ENSABRG00000007170) #26 ITM2A (ENSABRG00000007163) #27 ENSABRG00000007160 ##29 ENSABRG00000007158 #29 ENSABRG00000007157 #29 LPAR4 (ENSABRG00000007153) #31 ENSABRG00000007149 #33 CYSLTR1 (ENSABRG00000007145) #34 ENSABRG00000004499 #35 TAF9 (ENSABRG00000004161) KIF4A (ENSABRG00000003237) PDZD11 (ENSABRG00000003127) ENSABRG00000003089 Anatidae ANCESTRAL SPECIES 24 ENSGT00390000001134.b.e ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b.x #22 ENSGT00950000183107.a.b.b.w #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000155097 ENSGT00940000158195 ENSGT00940000153222.a.b.b.b.b Pink-footed goose MODERN SPECIES 4 DACH2 (ENSABRG00000011177) ENSABRG00000010897 POF1B (ENSABRG00000010810) #7 ZNF711 (ENSABRG00000010688) #8 ENSABRG00000010671 #9 APOOL (ENSABRG00000010661) #11 ENSABRG00000010619 HDX (ENSABRG00000010585) #15 RPS6KA6 (ENSABRG00000007374) #16 POU3F4 (ENSABRG00000007243) #18 ENSABRG00000007234 ENSABRG00000007228 ENSABRG00000007226 #19 SH3BGRL (ENSABRG00000007222) #20 ENSABRG00000007220 ENSABRG00000007216 #22 ENSABRG00000007196 #22 TENT5D (ENSABRG00000007191) #24 CHMP1B (ENSABRG00000007183) #25 TBX22 (ENSABRG00000007170) #26 ITM2A (ENSABRG00000007163) #27 ENSABRG00000007160 ##29 ENSABRG00000007158 #29 ENSABRG00000007157 #29 LPAR4 (ENSABRG00000007153) #31 ENSABRG00000007149 #33 CYSLTR1 (ENSABRG00000007145) #34 ENSABRG00000004499 #35 TAF9 (ENSABRG00000004161) KIF4A (ENSABRG00000003237) PDZD11 (ENSABRG00000003127) Australian saltwater crocodile MODERN SPECIES 36 ENSCPRG00005010046 APOOL (ENSCPRG00005010049) #11 ENSCPRG00005010059 ENSCPRG00005010080 HDX (ENSCPRG00005010091) #15 RPS6KA6 (ENSCPRG00005010212) #16 POU3F4 (ENSCPRG00005010851) #18 ENSCPRG00005010856 ENSCPRG00005010857 ENSCPRG00005010861 ENSCPRG00005010866 #19 ENSCPRG00005010867 SH3BGRL (ENSCPRG00005010868) #20 ENSCPRG00005010871 ENSCPRG00005010876 BRWD3 (ENSCPRG00005010880) #22 ENSCPRG00005010894 TENT5D (ENSCPRG00005010897) #24 CLCN5 (ENSCPRG00005010901) ENSCPRG00005010906 PIRT (ENSCPRG00005010909) ENSCPRG00005010910 ENSCPRG00005011007 ELAC2 (ENSCPRG00005011541) MYOCD (ENSCPRG00005012141) MAP2K4 (ENSCPRG00005012196) TMEM220 (ENSCPRG00005012270) ADPRM (ENSCPRG00005012273) SCO1 (ENSCPRG00005012277) ENSCPRG00005012280 ENSCPRG00005012332 Cryptodira ANCESTRAL SPECIES 43 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT01100000263484.C.a.k ENSGT00940000155097 ENSGT00940000158195 Testudinoidea ANCESTRAL SPECIES 9 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00950000185117 ENSGT00950000185658 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT01100000263484.C.a.k Emydidae ANCESTRAL SPECIES 52 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT00950000185117 ENSGT00950000185658 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT01100000263484.C.a.k ENSGT00940000155097 painted turtle MODERN SPECIES 17 ENSCPBG00000014460 #9 ENSCPBG00000014466 #10 APOOL (ENSCPBG00000014469) #11 ENSCPBG00000014473 ENSCPBG00000014474 HDX (ENSCPBG00000014476) #15 RPS6KA6 (ENSCPBG00000014477) #16 ENSCPBG00000014478 POU3F4 (ENSCPBG00000014480) #18 ENSCPBG00000014482 ENSCPBG00000014484 ENSCPBG00000014485 #19 ENSCPBG00000014486 SH3BGRL (ENSCPBG00000014487) #20 ENSCPBG00000014488 BRWD3 (ENSCPBG00000014489) #22 ENSCPBG00000014490 ENSCPBG00000014491 TENT5D (ENSCPBG00000014492) #24 CHMP1B (ENSCPBG00000014493) #25 TBX22 (ENSCPBG00000014494) #26 ENSCPBG00000014495 ITM2A (ENSCPBG00000014497) #27 ENSCPBG00000014500 KLHL4 (ENSCPBG00000014501) ENSCPBG00000014502 ABL2 (ENSCPBG00000014503) TOR3A (ENSCPBG00000014504) FAM20B (ENSCPBG00000014506) RALGPS2 (ENSCPBG00000014507) ANGPTL1 (ENSCPBG00000014508) Three-toed box turtle MODERN SPECIES 61 ZNF711 (ENSTMTG00000011815) #8 ENSTMTG00000011790 #9 ENSTMTG00000011776 ##10 ENSTMTG00000011769 #10 APOOL (ENSTMTG00000011730) #11 ENSTMTG00000011701 HDX (ENSTMTG00000011687) #15 RPS6KA6 (ENSTMTG00000003012) #16 POU3F4 (ENSTMTG00000002563) #18 ENSTMTG00000002553 ENSTMTG00000002532 ENSTMTG00000002524 #19 ENSTMTG00000002522 SH3BGRL (ENSTMTG00000002519) #20 ENSTMTG00000002514 BRWD3 (ENSTMTG00000001842) #22 ENSTMTG00000001676 TENT5D (ENSTMTG00000001666) #24 CHMP1B (ENSTMTG00000001657) #25 TBX22 (ENSTMTG00000001640) #26 ITM2A (ENSTMTG00000001630) #27 ENSTMTG00000001618 ##29 ENSTMTG00000001610 #29 ENSTMTG00000001604 #29 LPAR4 (ENSTMTG00000001601) #31 ENSTMTG00000001597 #33 CYSLTR1 (ENSTMTG00000001590) #34 ENSTMTG00000001544 #35 ENSTMTG00000001523 TAF9 (ENSTMTG00000001515) ENSTMTG00000001504 Testudinidae ANCESTRAL SPECIES 21 ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00950000185117 ENSGT00950000185658 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01050000245003 #33 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT01100000263484.C.a.k Goode s thornscrub tortoise MODERN SPECIES 23 ENSGEVG00005015222 POF1B (ENSGEVG00005015312) #7 ZNF711 (ENSGEVG00005015654) #8 ENSGEVG00005015707 #10 APOOL (ENSGEVG00005015811) #11 ENSGEVG00005016049 HDX (ENSGEVG00005017426) #15 RPS6KA6 (ENSGEVG00005017450) #16 POU3F4 (ENSGEVG00005017506) #18 ENSGEVG00005017520 ENSGEVG00005017550 ENSGEVG00005017599 #19 ENSGEVG00005017613 SH3BGRL (ENSGEVG00005017624) #20 ENSGEVG00005017639 BRWD3 (ENSGEVG00005017665) #22 ENSGEVG00005017724 ENSGEVG00005017737 TENT5D (ENSGEVG00005017761) #24 CHMP1B (ENSGEVG00005017781) #25 TBX22 (ENSGEVG00005017817) #26 ITM2A (ENSGEVG00005017870) #27 ENSGEVG00005017890 ##29 ENSGEVG00005017910 #29 ENSGEVG00005017929 #29 LPAR4 (ENSGEVG00005017940) #31 ENSGEVG00005017955 #33 CYSLTR1 (ENSGEVG00005017965) #34 ENSGEVG00005017986 #35 ENSGEVG00005018052 TAF9 (ENSGEVG00005018083) Abingdon island giant tortoise MODERN SPECIES 1979 ENSCABG00000005411 ENSCABG00000005414 ENSCABG00000005420 #19 ENSCABG00000005424 SH3BGRL (ENSCABG00000005432) #20 ENSCABG00000005435 BRWD3 (ENSCABG00000005444) #22 ENSCABG00000005611 ENSCABG00000005614 TENT5D (ENSCABG00000005616) #24 CHMP1B (ENSCABG00000005618) #25 TBX22 (ENSCABG00000005620) #26 ITM2A (ENSCABG00000005622) #27 ENSCABG00000005625 ##29 ENSCABG00000005627 #29 ENSCABG00000005628 #29 LPAR4 (ENSCABG00000005629) #31 ENSCABG00000005631 #33 CYSLTR1 (ENSCABG00000005632) #34 ENSCABG00000005679 #35 ENSCABG00000008419 TAF9 (ENSCABG00000008420) Chinese turtle MODERN SPECIES 1631 RPS6KA6 (ENSPSIG00000006547) #16 POU3F4 (ENSPSIG00000000094) #18 ENSPSIG00000008219 ENSPSIG00000008317 ENSPSIG00000000096 #19 ENSPSIG00000008821 SH3BGRL (ENSPSIG00000008827) #20 ENSPSIG00000008960 BRWD3 (ENSPSIG00000009147) #22 ENSPSIG00000000097 TENT5D (ENSPSIG00000000100) #24 CHMP1B (ENSPSIG00000013179) #25 Anura ANCESTRAL SPECIES 19 ENSGT00940000159818 ENSGT00390000001134.b ENSGT00950000182994.A ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00990000205517 ENSGT00530000063666.a #11 ENSGT00940000164237.t ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 Frog MODERN SPECIES 8 chm (ENSXETG00000017820) ENSXETG00000046316 pof1b (ENSXETG00000017818) #7 znf711 (ENSXETG00000017817) #8 ENSXETG00000046191 apool (ENSXETG00000017816) #9 satl1 (ENSXETG00000039007) ##10 ENSXETG00000017815 hdx (ENSXETG00000014523) #15 rps6ka6 (ENSXETG00000014506) #16 pou3f4 (ENSXETG00000014504) #18 XB5726496 [provisional:tmem182] (ENSXETG00000026233) slc9a2l (ENSXETG00000014501) ENSXETG00000042644 #19 sh3bgrl (ENSXETG00000044909) #20 brwd3 (ENSXETG00000022117) #22 ENSXETG00000042317 XB5896658 [provisional:stx3] (ENSXETG00000047005) tent5d (ENSXETG00000044889) #24 chmp1b (ENSXETG00000022122) #25 tbx22 (ENSXETG00000006730) #26 itm2a (ENSXETG00000027280) #27 gpr174 (ENSXETG00000006729) ##29 srpx2 (ENSXETG00000006728) sytl4 (ENSXETG00000006723) znf282 (ENSXETG00000035960) ENSXETG00000044600 ENSXETG00000047718 tmlhe (ENSXETG00000018382) ENSXETG00000018385 spry3 (ENSXETG00000045132) Leishan spiny toad MODERN SPECIES 12 APOOL (ENSLLEG00000014000) #11 ENSLLEG00000013835 ENSLLEG00000013624 ENSLLEG00000013536 HDX (ENSLLEG00000013463) #15 RPS6KA6 (ENSLLEG00000012752) #16 POU3F4 (ENSLLEG00000012630) #18 ENSLLEG00000012610 ENSLLEG00000012590 ENSLLEG00000012552 ENSLLEG00000012520 ENSLLEG00000012395 ENSLLEG00000012370 #19 SH3BGRL (ENSLLEG00000012318) #20 ENSLLEG00000012280 BRWD3 (ENSLLEG00000012042) #22 ENSLLEG00000011986 TENT5D (ENSLLEG00000011962) #24 CHMP1B (ENSLLEG00000011890) #25 TBX22 (ENSLLEG00000011833) #26 ITM2A (ENSLLEG00000028053) #27 ENSLLEG00000028031 ENSLLEG00000027996 ##29 ENSLLEG00000027953 AP2S1 (ENSLLEG00000027801) ENSLLEG00000027768 SLC1A5 (ENSLLEG00000027633) FKRP (ENSLLEG00000027613) GNG8 (ENSLLEG00000027593) PTGIR (ENSLLEG00000027509) ENSLLEG00000027489 Coelacanth MODERN SPECIES 1013 ENSLACG00000007754 ENSLACG00000010109 #19 sh3bgrl (ENSLACG00000010473) #20 ENSLACG00000011746 BRWD3 (ENSLACG00000012260) #22 ENSLACG00000013510 Actinopterygii ANCESTRAL SPECIES 83 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00990000203619.B ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT01100000263484.C.a ENSGT00950000183031.B ENSGT01100000263512.a.a.a.a ENSGT00550000075160 Reedfish DUPLICATION Reedfish MODERN SPECIES 604 ENSECRG00000020817 #22 Reedfish MODERN SPECIES 3 POF1B (ENSECRG00000016431) #7 znf711 (ENSECRG00000016350) #8 ENSECRG00000016317 #9 APOOL (ENSECRG00000016295) #11 ENSECRG00000016218 HDX (ENSECRG00000016169) #15 rps6kal (ENSECRG00000015780) #16 ENSECRG00000015655 ENSECRG00000015621 ENSECRG00000015472 POU3F4 (ENSECRG00000015422) #18 ENSECRG00000015354 ENSECRG00000015316 ENSECRG00000015289 #19 sh3bgrl (ENSECRG00000015257) #20 ENSECRG00000015236 #22 ENSECRG00000015178 TENT5D (ENSECRG00000015087) #24 chmp1b (ENSECRG00000014673) #25 TBX22 (ENSECRG00000014468) #26 ITM2A (ENSECRG00000014408) #27 ENSECRG00000014389 ##29 ENSECRG00000014375 p2ry10 (ENSECRG00000014343) #29 LPAR4 (ENSECRG00000014329) #31 ENSECRG00000014304 siah2l (ENSECRG00000014277) ENSECRG00000014256 ENSECRG00000014168 ENSECRG00000014054 ENOX2 (ENSECRG00000013991) Neopterygii ANCESTRAL SPECIES 84 ENSGT00520000059318 #9 ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01030000235435 ENSGT01100000263536.B.c.b #34 ENSGT00940000163592 #35 ENSGT00940000153997.b.a.b ENSGT01100000263484.C.a ENSGT00950000183031.B ENSGT01100000263512.a.a.a.a Spotted gar MODERN SPECIES 673 gpc3 (ENSLOCG00000015071) gpc4 (ENSLOCG00000015069) mbnl3 (ENSLOCG00000015065) ENSLOCG00000015063 rap2c (ENSLOCG00000015061) ENSLOCG00000015059 ENSLOCG00000015048 hdx (ENSLOCG00000015046) #15 rps6kal (ENSLOCG00000015032) #16 ENSLOCG00000015028 POU3F4 (ENSLOCG00000017491) #18 ENSLOCG00000015022 ENSLOCG00000015020 #19 sh3bgrl (ENSLOCG00000015016) #20 hmgn6 (ENSLOCG00000015014) BRWD3 (ENSLOCG00000014998) #22 ENSLOCG00000017490 TENT5D (ENSLOCG00000014996) #24 chmp1b (ENSLOCG00000014992) #25 TBX22 (ENSLOCG00000014991) #26 ITM2A (ENSLOCG00000014989) #27 ENSLOCG00000017489 ##29 p2ry10 (ENSLOCG00000014987) #29 LPAR4 (ENSLOCG00000017488) #31 ENSLOCG00000014986 cysltr1 (ENSLOCG00000017487) #34 ENSLOCG00000014984 #35 MLNR (ENSLOCG00000014982) rraga (ENSLOCG00000014979) ENSLOCG00000014978 polr1d (ENSLOCG00000014976) Osteoglossocephalai ANCESTRAL SPECIES 71 ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b ENSGT00940000155920 ENSGT01050000244888.b.a.c.a ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01030000235435 ENSGT01100000263536.B.c.b #34 ENSGT00950000183031.B ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 ENSGT00950000182915.a.b Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 385 ENSGT00940000159242.k #16 ENSGT00940000161429.b #18 ENSGT00950000183107.a.b.b.c #22 ENSGT01050000244948.d ENSGT00950000183107.a.b.b.d #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00950000183115.b.b.h #27 ENSGT01100000263536.A.a.b.b ##29 ENSGT01100000263536.B.c.b.j #34 ENSGT01100000263512.a.a.a.a.d ENSGT00510000047733.t Asian bonytongue MODERN SPECIES 5 ZC4H2 (ENSSFOG00015008792) shisa2a (ENSSFOG00015008823) mtmr8 (ENSSFOG00015008844) asb12a (ENSSFOG00015008890) amer1 (ENSSFOG00015008892) ARHGEF9 (ENSSFOG00015027567) ENSSFOG00015029964 smarca1 (ENSSFOG00015009043) TENM1 (ENSSFOG00015009122) SH2D1A (ENSSFOG00015009183) agtr2 (ENSSFOG00015009207) apool (ENSSFOG00015029030) #11 ENSSFOG00015009216 rps6kal (ENSSFOG00015009328) #16 POU3F4 (ENSSFOG00015024608) #18 BRWD3 (ENSSFOG00015009384) #22 ENSSFOG00015030281 TENT5D (ENSSFOG00015032738) #24 chmp1b (ENSSFOG00015028441) #25 ENSSFOG00015009454 #27 ENSSFOG00015009463 ##29 CYSLTR1 (ENSSFOG00015009469) #34 ENSSFOG00015009476 sybl1 (ENSSFOG00015029613) mpp1 (ENSSFOG00015009567) dkc1 (ENSSFOG00015009585) TMLHE (ENSSFOG00015009685) taf9 (ENSSFOG00015009760) siah2l (ENSSFOG00015027597) ENSSFOG00015009797 GPR119 (ENSSFOG00015009808) P. kingsleyae MODERN SPECIES 29 las1l (ENSPKIG00000012906) ZC3H12B (ENSPKIG00000012946) ZC4H2 (ENSPKIG00000012983) shisa2a (ENSPKIG00000013013) mtmr8 (ENSPKIG00000013052) asb12a (ENSPKIG00000013105) amer1 (ENSPKIG00000013117) ENSPKIG00000013176 FUT7 (ENSPKIG00000013273) ENSPKIG00000013301 smarca1 (ENSPKIG00000013411) TENM1 (ENSPKIG00000013656) ENSPKIG00000013868 RPS6KA6 (ENSPKIG00000014054) #16 POU3F4 (ENSPKIG00000014144) #18 BRWD3 (ENSPKIG00000014173) #22 ENSPKIG00000014242 chmp1b (ENSPKIG00000014262) #25 ENSPKIG00000014290 ##29 dnaaf6 (ENSPKIG00000014308) MAGT1 (ENSPKIG00000014323) ENSPKIG00000014353 CNGA2 (ENSPKIG00000014391) si:ch211-153b23.4 (ENSPKIG00000014429) ENSPKIG00000014458 znf711 (ENSPKIG00000014501) #8 taf1 (ENSPKIG00000014590) ENSPKIG00000014694 PLP1 (ENSPKIG00000014799) gria3b (ENSPKIG00000014866) rtn2b (ENSPKIG00000014937) Osteoglossiformes ANCESTRAL SPECIES 385 ENSGT00940000159242.k #16 ENSGT00940000161429.b #18 ENSGT00950000183107.a.b.b.c #22 ENSGT01050000244948.d ENSGT00950000183107.a.b.b.d #22 ENSGT00940000162488 #24 ENSGT00950000182832.D.b #25 ENSGT00950000183115.b.b.h #27 ENSGT01100000263536.A.a.b.b ##29 ENSGT01100000263536.B.c.b.j #34 ENSGT01100000263512.a.a.a.a.d ENSGT00510000047733.t Asian bonytongue MODERN SPECIES 4 zc4h2 (ENSSFOG00015012852) asb12b (ENSSFOG00015012811) ENSSFOG00015012727 TENM1 (ENSSFOG00015012635) SH2D1A (ENSSFOG00015032266) AGTR2 (ENSSFOG00015012602) APOOL (ENSSFOG00015012586) #11 ENSSFOG00015012153 ENSSFOG00015009239 hdx (ENSSFOG00015012057) #15 rps6kal (ENSSFOG00015011997) #16 POU3F4 (ENSSFOG00015025647) #18 ENSSFOG00015011963 ENSSFOG00015011953 #19 sh3bgrl (ENSSFOG00015011941) #20 BRWD3 (ENSSFOG00015011846) #22 TENT5D (ENSSFOG00015009416) #24 CHMP1B (ENSSFOG00015011796) #25 TBX22 (ENSSFOG00015011756) #26 ITM2A (ENSSFOG00015011735) #27 ENSSFOG00015011728 ##29 p2ry10 (ENSSFOG00015031809) #29 LPAR4 (ENSSFOG00015011713) #31 ENSSFOG00015011703 ENSSFOG00015025572 cysltr1 (ENSSFOG00015011692) #34 ENSSFOG00015011676 #35 ENSSFOG00015011499 rraga (ENSSFOG00015011428) ENSSFOG00015011397 polr1d (ENSSFOG00015011375) Clupeocephala ANCESTRAL SPECIES 86 ENSGT00940000159803 ENSGT00940000157297 ENSGT01030000234566.e.b.b.b ENSGT00940000155920 ENSGT01050000244888.b.a.c.a ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01030000235435 ENSGT01100000263536.B.c.b #34 ENSGT00950000183031.B ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 ENSGT00950000182915.a.b ENSGT00940000161737 Euteleosteomorpha ANCESTRAL SPECIES 133 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000175813 ENSGT00570000080851 ENSGT00390000003107.b.i ENSGT00940000177260 ENSGT01080000257533 ENSGT00610000087474 ENSGT00940000166868.a Acanthomorphata ANCESTRAL SPECIES 53 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.h ENSGT01040000240566 ENSGT01050000244864.B.a.g.a ENSGT00940000159451 ENSGT01050000245018 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Cod MODERN SPECIES 20 ENSGMOG00000003685 ENSGMOG00000003708 ENSGMOG00000001858 ENSGMOG00000027534 ENSGMOG00000033332 ENSGMOG00000017996 AR (ENSGMOG00000010216) OPHN1 (ENSGMOG00000014176) gjb1a (ENSGMOG00000022490) ENSGMOG00000026036 tbc1d8b (ENSGMOG00000014099) ENSGMOG00000014163 ENSGMOG00000014114 ENSGMOG00000020287 ENSGMOG00000012332 ENSGMOG00000004732 #22 ENSGMOG00000035512 #24 ENSGMOG00000004839 #25 ENSGMOG00000004849 ENSGMOG00000004872 ENSGMOG00000004896 ENSGMOG00000005011 ENSGMOG00000035104 ENSGMOG00000007189 ppm1nb (ENSGMOG00000031036) rtn2b (ENSGMOG00000017752) nectin3b (ENSGMOG00000017549) ENSGMOG00000003420 ENSGMOG00000003200 ENSGMOG00000003451 ENSGMOG00000024864 Euacanthomorphacea ANCESTRAL SPECIES 19 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.h ENSGT01040000240566 ENSGT01050000244864.B.a.g.a ENSGT00940000159451 ENSGT01050000245018 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Pinecone sodierfish MODERN SPECIES 5 msi2a (ENSMMDG00005012339) ENSMMDG00005012335 glra4b (ENSMMDG00005012331) aifm1 (ENSMMDG00005010913) ENSMMDG00005010893 amer1 (ENSMMDG00005010889) ZC3H12B (ENSMMDG00005010876) msna (ENSMMDG00005008982) AR (ENSMMDG00005008721) OPHN1 (ENSMMDG00005008688) gjb1a (ENSMMDG00005008681) gja2 (ENSMMDG00005008677) tbc1d8b (ENSMMDG00005008616) ENSMMDG00005008603 npas2 (ENSMMDG00005008596) BRWD3 (ENSMMDG00005007861) #22 chmp1b (ENSMMDG00005007740) #25 rraga (ENSMMDG00005007632) CNGA2 (ENSMMDG00005007546) pls3 (ENSMMDG00005002058) ENSMMDG00005001920 ccdc61 (ENSMMDG00005001906) ENSMMDG00005001848 ENSMMDG00005001828 ppm1nb (ENSMMDG00005001820) rtn2b (ENSMMDG00005001812) nectin3b (ENSMMDG00005001804) ENSMMDG00005001800 ENSMMDG00005001796 ppme1 (ENSMMDG00005001443) ucp3 (ENSMMDG00005001405) Percomorphaceae ANCESTRAL SPECIES 9 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.h ENSGT01040000240566 ENSGT01050000244864.B.a.g.a ENSGT00940000159451 ENSGT01050000245018 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Tiger tail seahorse MODERN SPECIES 103 glra4b (ENSHCOG00000009138) aifm1 (ENSHCOG00000008578) ENSHCOG00000008534 amer1 (ENSHCOG00000008522) ZC3H12B (ENSHCOG00000008487) msna (ENSHCOG00000008477) AR (ENSHCOG00000008384) ENSHCOG00000007225 gjb1a (ENSHCOG00000007200) ENSHCOG00000007188 tbc1d8b (ENSHCOG00000007176) ENSHCOG00000007133 ENSHCOG00000007126 ENSHCOG00000007101 npas2 (ENSHCOG00000007018) BRWD3 (ENSHCOG00000006979) #22 ENSHCOG00000006871 #24 chmp1b (ENSHCOG00000006856) #25 rraga (ENSHCOG00000006819) CNGA2 (ENSHCOG00000006778) pls3 (ENSHCOG00000006756) ENSHCOG00000006712 ccdc61 (ENSHCOG00000006702) ENSHCOG00000006673 ppm1nb (ENSHCOG00000006662) rtn2b (ENSHCOG00000006642) nectin3b (ENSHCOG00000006615) ppme1 (ENSHCOG00000006610) ucp3 (ENSHCOG00000006586) dnajb13 (ENSHCOG00000006570) rab6a (ENSHCOG00000006550) Percomorphaceae_B ANCESTRAL SPECIES 10 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.a.a ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.b ENSGT01050000245018 ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b Ovalentaria ANCESTRAL SPECIES 11 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.a.a ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.b ENSGT01050000245018 ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b Ovalentaria_B ANCESTRAL SPECIES 16 ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000235048 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.h ENSGT01050000244864.B.a.g.a.b ENSGT01050000245018 ENSGT01040000240566 ENSGT01050000244864.B.a.g.a.a.a ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g Pomacentridae ANCESTRAL SPECIES 10 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a.h ENSGT00940000159134.r.a.a.g.a.a.a ENSGT00940000159134.r.a.a.g.a.a.b ENSGT00940000159134.r.a.a.g.a.b ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000235048 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.h ENSGT01050000244864.B.a.g.a.b ENSGT01050000245018 ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b Bicolor damselfish MODERN SPECIES 1160 OPHN1 (ENSSPAG00000010286) gjb1a (ENSSPAG00000010273) gja2 (ENSSPAG00000010258) tbc1d8b (ENSSPAG00000010199) ENSSPAG00000010181 npas2 (ENSSPAG00000010139) BRWD3 (ENSSPAG00000010077) #22 TENT5D (ENSSPAG00000010056) #24 chmp1b (ENSSPAG00000010018) #25 rraga (ENSSPAG00000009979) CNGA2 (ENSSPAG00000009954) pls3 (ENSSPAG00000009907) ENSSPAG00000009858 ccdc61 (ENSSPAG00000009814) ENSSPAG00000009793 ENSSPAG00000009779 ppm1nb (ENSSPAG00000009732) Pomacentridae_A ANCESTRAL SPECIES 3 ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a.h ENSGT00940000159134.r.a.a.g.a.a.a ENSGT00940000159134.r.a.a.g.a.a.b ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000235048 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.h ENSGT01050000244864.B.a.g.a.b ENSGT01050000245018 ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b Spiny chromis MODERN SPECIES 1758 ENSAPOG00000011718 npas2 (ENSAPOG00000011750) BRWD3 (ENSAPOG00000012028) #22 ENSAPOG00000012054 #24 chmp1b (ENSAPOG00000012093) #25 rraga (ENSAPOG00000012140) CNGA2 (ENSAPOG00000012169) Amphiprion ANCESTRAL SPECIES 3 ENSGT00940000159134.r.a.a.h ENSGT00940000159134.r.a.a.g.b.b ENSGT00940000159134.r.a.a.g.a.a.a.d ENSGT00940000159134.r.a.a.g.a.a.b ENSGT00940000159134.r.a.a.g.b.a ENSGT00940000159134.r.a.a.g.a.a.a.c ENSGT00940000155516.u ENSGT00940000181464 ENSGT00940000160157 ENSGT01030000235048 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.h ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Orange clownfish MODERN SPECIES 6 B3GNT3 (ENSAPEG00000007396) B3GNT3 (ENSAPEG00000007381) ENSAPEG00000007375 B3GNT3 (ENSAPEG00000007361) ENSAPEG00000007345 ENSAPEG00000007327 AR (ENSAPEG00000007289) ENSAPEG00000007266 ENSAPEG00000007245 ENSAPEG00000007225 gjb1a (ENSAPEG00000007203) gja2 (ENSAPEG00000007174) tbc1d8b (ENSAPEG00000007059) ENSAPEG00000007002 npas2 (ENSAPEG00000006921) BRWD3 (ENSAPEG00000006664) #22 ENSAPEG00000006630 #24 chmp1b (ENSAPEG00000006610) #25 rraga (ENSAPEG00000006571) CNGA2 (ENSAPEG00000006384) pls3 (ENSAPEG00000006329) ENSAPEG00000006307 ccdc61 (ENSAPEG00000006300) ENSAPEG00000006207 ENSAPEG00000006186 ppm1nb (ENSAPEG00000006160) rtn2b (ENSAPEG00000006129) nectin3b (ENSAPEG00000006070) ENSAPEG00000006027 ppme1 (ENSAPEG00000005978) ucp3 (ENSAPEG00000005954) Clown anemonefish DUPLICATION Clown anemonefish MODERN SPECIES 1337 cadm1b (ENSAOCG00000002650) ncam1b (ENSAOCG00000008083) limk1a (ENSAOCG00000008182) ENSAOCG00000008228 MNT (ENSAOCG00000008234) mettl16 (ENSAOCG00000008277) pafah1b1a (ENSAOCG00000008323) cluha (ENSAOCG00000008439) ENSAOCG00000008582 #22 ENSAOCG00000008606 #24 chmp1b (ENSAOCG00000008616) #25 rraga (ENSAOCG00000002304) CNGA2 (ENSAOCG00000008676) Clown anemonefish MODERN SPECIES 3224 ENSAOCG00000017118 ENSAOCG00000017137 ENSAOCG00000017160 gjb1a (ENSAOCG00000002391) tbc1d8b (ENSAOCG00000017323) ENSAOCG00000001221 npas2 (ENSAOCG00000017516) ENSAOCG00000017548 #22 Cichlidae ANCESTRAL SPECIES 4 ENSGT00390000001738 ENSGT00530000063721.B ENSGT00940000159921.c ENSGT00390000009753 ENSGT00940000159375.c.a ENSGT00940000161083 ENSGT00940000154911 ENSGT00390000018151 ENSGT00990000203589.a.a ENSGT00390000015077 ENSGT00390000017214 ENSGT00390000001189.a ENSGT00940000153491.b.b.a ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b Midas cichlid MODERN SPECIES 27 zgc:56585 (ENSACIG00000013070) aspa (ENSACIG00000013132) ABR (ENSACIG00000013157) ENSACIG00000013209 npas2 (ENSACIG00000013341) BRWD3 (ENSACIG00000013384) #22 TENT5D (ENSACIG00000013537) #24 chmp1b (ENSACIG00000013546) #25 rraga (ENSACIG00000013561) CNGA2 (ENSACIG00000013635) PLS3 (ENSACIG00000013653) ENSACIG00000013688 ENSACIG00000013780 ENSACIG00000013855 ppm1nb (ENSACIG00000013863) rtn2b (ENSACIG00000013878) nectin3b (ENSACIG00000013905) ENSACIG00000013918 ppme1 (ENSACIG00000013932) ucp3 (ENSACIG00000013999) ucp2 (ENSACIG00000014571) Pseudocrenilabrinae ANCESTRAL SPECIES 14 ENSGT00390000001738 ENSGT00530000063721.B ENSGT00940000159921.c ENSGT00390000009753 ENSGT00940000159375.c.a ENSGT00940000161083 ENSGT00940000154911 ENSGT00390000018151 ENSGT00990000203589.a.a ENSGT00390000015077 ENSGT00390000017214 ENSGT00390000001189.a ENSGT00940000153491.b.b.a ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Nile tilapia MODERN SPECIES 1 vps11 (ENSONIG00000004772) ENSONIG00000034958 ENSONIG00000004778 ENSONIG00000032303 akt2l (ENSONIG00000004786) ENSONIG00000039692 ENSONIG00000042032 ENSONIG00000032642 ENSONIG00000025954 ENSONIG00000037875 ENSONIG00000015497 taf6 (ENSONIG00000042438) ENSONIG00000042704 ENSONIG00000004474 npas2 (ENSONIG00000004466) BRWD3 (ENSONIG00000004457) #22 ENSONIG00000036055 #24 chmp1b (ENSONIG00000004453) #25 rraga (ENSONIG00000004447) CNGA2 (ENSONIG00000004443) pls3 (ENSONIG00000004433) ENSONIG00000004427 ccdc61 (ENSONIG00000004422) ENSONIG00000037494 ppm1nb (ENSONIG00000004417) rtn2b (ENSONIG00000004413) nectin3b (ENSONIG00000027285) ppme1 (ENSONIG00000004406) ucp3 (ENSONIG00000038046) dnajb13 (ENSONIG00000004401) ucp2 (ENSONIG00000042368) Pseudocrenilabrinae_A ANCESTRAL SPECIES 21 ENSGT00530000063721.B ENSGT00940000159921.c ENSGT00390000009753 ENSGT00940000159375.c.a ENSGT00940000161083 ENSGT00940000154911 ENSGT00390000018151 ENSGT00940000176839.c.b.a.b.b ENSGT00990000203589.a.a ENSGT00390000015077 ENSGT00390000017214 ENSGT00390000001189.a ENSGT00940000153491.b.b.a ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b Lyretail cichlid MODERN SPECIES 378 ENSNBRG00000015887 npas2 (ENSNBRG00000015899) BRWD3 (ENSNBRG00000015998) #22 ENSNBRG00000016145 #24 chmp1b (ENSNBRG00000016154) #25 rraga (ENSNBRG00000016166) CNGA2 (ENSNBRG00000016189) pls3 (ENSNBRG00000016222) ENSNBRG00000016297 rtn2b (ENSNBRG00000016458) nectin3b (ENSNBRG00000016475) ENSNBRG00000016503 ppme1 (ENSNBRG00000016545) ucp3 (ENSNBRG00000016592) ucp2 (ENSNBRG00000016602) dnajb13 (ENSNBRG00000016628) rab6a (ENSNBRG00000016716) gjd1a (ENSNBRG00000016753) Haplochromini ANCESTRAL SPECIES 8 ENSGT00530000063721.B ENSGT00940000159921.c ENSGT00390000009753 ENSGT00940000159375.c.a ENSGT00940000161083 ENSGT00940000154911 ENSGT00390000018151 ENSGT00940000176839.c.b.a.b.b ENSGT00990000203589.a.a ENSGT00390000015077 ENSGT00390000017214 ENSGT00390000001189.a ENSGT00940000153491.b.b.a ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Haplochromini_A ANCESTRAL SPECIES 6 ENSGT00530000063721.B ENSGT00940000159921.c ENSGT00390000009753 ENSGT00940000159375.c.a ENSGT00940000161083 ENSGT00940000154911 ENSGT00390000018151 ENSGT00940000176839.c.b.a.b.b ENSGT00990000203589.a.a ENSGT00390000015077 ENSGT00390000017214 ENSGT00390000001189.a ENSGT00940000153491.b.b.a ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b Haplochromini_B ANCESTRAL SPECIES 26 ENSGT00530000063721.B ENSGT00940000159921.c ENSGT00390000009753 ENSGT00940000159375.c.a ENSGT00940000161083 ENSGT00940000154911 ENSGT00390000018151 ENSGT00990000203589.a.a ENSGT00390000015077 ENSGT00390000017214 ENSGT00390000001189.a ENSGT00940000153491.b.b.a ENSGT00390000013764.ab.a.a.b ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Eastern happy MODERN SPECIES 1 zfpl1 (ENSACLG00000009747) FLRT1 (ENSACLG00000009752) rps6ka4 (ENSACLG00000009762) stip1 (ENSACLG00000009800) ENSACLG00000009843 ENSACLG00000010069 AKAP10 (ENSACLG00000010086) zgc:85789 (ENSACLG00000010122) ENSACLG00000010145 aspa (ENSACLG00000010151) ABR (ENSACLG00000010175) ENSACLG00000010311 ENSACLG00000010312 npas2 (ENSACLG00000010323) ENSACLG00000010333 BRWD3 (ENSACLG00000010338) #22 ENSACLG00000010424 #24 chmp1b (ENSACLG00000010431) #25 rraga (ENSACLG00000010458) CNGA2 (ENSACLG00000010498) pls3 (ENSACLG00000010949) ENSACLG00000011009 ccdc61 (ENSACLG00000011115) ppm1nb (ENSACLG00000011167) ENSACLG00000011197 rtn2b (ENSACLG00000011424) ENSACLG00000011440 nectin3b (ENSACLG00000011444) ppme1 (ENSACLG00000011448) ucp3 (ENSACLG00000011474) ucp2 (ENSACLG00000011486) Zebra mbuna MODERN SPECIES 1092 ENSMZEG00005015869 gria3a (ENSMZEG00005015863) thoc2 (ENSMZEG00005015842) stag2a (ENSMZEG00005015803) ENSMZEG00005015782 ENSMZEG00005015769 myo1ca (ENSMZEG00005015703) ENSMZEG00005015663 DSCAML1 (ENSMZEG00005015615) scn4bb (ENSMZEG00005015588) mpzl2b (ENSMZEG00005015579) pafah1b2 (ENSMZEG00005015552) TAGLN (ENSMZEG00005015246) ENSMZEG00005015197 npas2 (ENSMZEG00005015174) BRWD3 (ENSMZEG00005015137) #22 ENSMZEG00005015106 #24 chmp1b (ENSMZEG00005015095) #25 rraga (ENSMZEG00005015085) CNGA2 (ENSMZEG00005014084) pls3 (ENSMZEG00005014040) ENSMZEG00005013999 ccdc61 (ENSMZEG00005013984) cyb561d1 (ENSMZEG00005013976) aspa (ENSMZEG00005013967) ABR (ENSMZEG00005013860) ENSMZEG00005013840 ENSMZEG00005013820 ENSMZEG00005013807 TMLHE (ENSMZEG00005013795) mpp1 (ENSMZEG00005013784) P. nyererei MODERN SPECIES 359 RADX (ENSPNYG00000021359) npas2 (ENSPNYG00000021323) BRWD3 (ENSPNYG00000021206) #22 ENSPNYG00000021167 #24 chmp1b (ENSPNYG00000021158) #25 rraga (ENSPNYG00000021130) CNGA2 (ENSPNYG00000021007) pls3 (ENSPNYG00000020948) ENSPNYG00000020871 ENSPNYG00000020844 ENSPNYG00000020830 ppm1nb (ENSPNYG00000020811) rtn2b (ENSPNYG00000020801) nectin3b (ENSPNYG00000020746) ENSPNYG00000020721 ppme1 (ENSPNYG00000020708) ucp3 (ENSPNYG00000020691) ucp2 (ENSPNYG00000020671) Burton s mouthbrooder DUPLICATION Burton s mouthbrooder MODERN SPECIES 316 ENSHBUG00000004669 npas2 (ENSHBUG00000004648) ENSHBUG00000004609 #22 ENSHBUG00000004518 #24 chmp1b (ENSHBUG00000004501) #25 rraga (ENSHBUG00000004494) CNGA2 (ENSHBUG00000004404) pls3 (ENSHBUG00000004236) ENSHBUG00000004204 ccdc61 (ENSHBUG00000004145) ENSHBUG00000004115 ppm1nb (ENSHBUG00000004099) rtn2b (ENSHBUG00000004083) nectin3b (ENSHBUG00000004076) ENSHBUG00000004072 ppme1 (ENSHBUG00000004052) ucp3 (ENSHBUG00000000101) dnajb13 (ENSHBUG00000004032) Burton s mouthbrooder MODERN SPECIES 1451 ENSHBUG00000010701 #22 Atherinomorphae ANCESTRAL SPECIES 14 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.a.a ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.b ENSGT01050000245018 ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b.d #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Oryzias ANCESTRAL SPECIES 14 ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a.d.b ENSGT00940000159134.r.a.a.d.a ENSGT00940000159134.r.a.a.c.a ENSGT00940000159134.r.a.a.c.b ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.b ENSGT01050000245018 ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b.d #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Oryzias_b ANCESTRAL SPECIES 13 ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a.d.b ENSGT00940000159134.r.a.a.d.a ENSGT00940000159134.r.a.a.c.a ENSGT00940000159134.r.a.a.c.b ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.b ENSGT00940000159451 ENSGT01050000245018 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b.d #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Indian medaka MODERN SPECIES 4 ENSOMEG00000005804 amer1 (ENSOMEG00000005783) ZC3H12B (ENSOMEG00000005768) msna (ENSOMEG00000005751) ENSOMEG00000005721 ENSOMEG00000005714 ENSOMEG00000005708 AR (ENSOMEG00000005697) ENSOMEG00000005630 gjb1a (ENSOMEG00000005589) gja2 (ENSOMEG00000005581) tbc1d8b (ENSOMEG00000005561) ENSOMEG00000005481 ENSOMEG00000005470 npas2 (ENSOMEG00000005430) BRWD3 (ENSOMEG00000005390) #22 TENT5D (ENSOMEG00000005309) #24 chmp1b (ENSOMEG00000005267) #25 rraga (ENSOMEG00000005139) CNGA2 (ENSOMEG00000005093) pls3 (ENSOMEG00000005011) ENSOMEG00000004958 ccdc61 (ENSOMEG00000004892) ENSOMEG00000004850 ppm1nb (ENSOMEG00000004837) rtn2b (ENSOMEG00000004824) nectin3b (ENSOMEG00000004811) ENSOMEG00000004795 ppme1 (ENSOMEG00000004752) ucp3 (ENSOMEG00000004623) dnajb13 (ENSOMEG00000004426) Javanese ricefish MODERN SPECIES 5 ZC3H12B (ENSOJAG00000014473) msna (ENSOJAG00000014569) ENSOJAG00000015831 ENSOJAG00000015839 ENSOJAG00000015844 ENSOJAG00000015847 AR (ENSOJAG00000015864) ENSOJAG00000016019 gjb1a (ENSOJAG00000016102) ENSOJAG00000016125 gja2 (ENSOJAG00000016134) tbc1d8b (ENSOJAG00000016184) ENSOJAG00000016536 ENSOJAG00000016559 npas2 (ENSOJAG00000016582) BRWD3 (ENSOJAG00000016872) #22 TENT5D (ENSOJAG00000019640) #24 chmp1b (ENSOJAG00000019669) #25 rraga (ENSOJAG00000019841) CNGA2 (ENSOJAG00000019872) pls3 (ENSOJAG00000019888) ENSOJAG00000020080 ccdc61 (ENSOJAG00000020163) ENSOJAG00000020176 ppm1nb (ENSOJAG00000020181) rtn2b (ENSOJAG00000020189) nectin3b (ENSOJAG00000020196) ppme1 (ENSOJAG00000020198) ucp3 (ENSOJAG00000020212) ucp2 (ENSOJAG00000020229) dnajb13 (ENSOJAG00000020237) Oryzias_a ANCESTRAL SPECIES 2 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a.d.b ENSGT00940000159134.r.a.a.d.a ENSGT00940000159134.r.a.a.c.a ENSGT00940000159134.r.a.a.c.b ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.b ENSGT01050000245018 ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b.d #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Japanese Medaka HdrR MODERN SPECIES 5 amer1 (ENSORLG00000009557) ZC3H12B (ENSORLG00000009556) msna (ENSORLG00000009545) ENSORLG00000009535 ENSORLG00000009531 ENSORLG00000022233 ENSORLG00000028693 ar (ENSORLG00000009520) ENSORLG00000010945 gjb1a (ENSORLG00000009493) gja2 (ENSORLG00000009487) ENSORLG00000026146 tbc1d8b (ENSORLG00000009483) ENSORLG00000009451 npas2 (ENSORLG00000009426) BRWD3 (ENSORLG00000009372) #22 TENT5D (ENSORLG00000009311) #24 chmp1b (ENSORLG00000009300) #25 rraga (ENSORLG00000009278) CNGA2 (ENSORLG00000009251) pls3 (ENSORLG00000009227) ENSORLG00000009187 ccdc61 (ENSORLG00000009166) ENSORLG00000009162 ppm1nb (ENSORLG00000009154) rtn2b (ENSORLG00000009139) nectin3b (ENSORLG00000009130) ENSORLG00000009120 ppme1 (ENSORLG00000009114) ucp3 (ENSORLG00000009082) ucp2 (ENSORLG00000024683) Chinese medaka MODERN SPECIES 717 glra4b (ENSOSIG00000019618) aifm1 (ENSOSIG00000019663) ENSOSIG00000020210 amer1 (ENSOSIG00000020214) ZC3H12B (ENSOSIG00000020215) msna (ENSOSIG00000020259) B3GNT3 (ENSOSIG00000020994) ENSOSIG00000020998 AR (ENSOSIG00000021028) ENSOSIG00000021099 gjb1a (ENSOSIG00000021117) gja2 (ENSOSIG00000021120) tbc1d8b (ENSOSIG00000021222) ENSOSIG00000021792 npas2 (ENSOSIG00000021828) BRWD3 (ENSOSIG00000022076) #22 TENT5D (ENSOSIG00000023041) #24 chmp1b (ENSOSIG00000023049) #25 rraga (ENSOSIG00000000690) CNGA2 (ENSOSIG00000000697) pls3 (ENSOSIG00000000752) ENSOSIG00000003279 ccdc61 (ENSOSIG00000003316) ENSOSIG00000003324 ppm1nb (ENSOSIG00000003326) rtn2b (ENSOSIG00000003329) nectin3b (ENSOSIG00000003333) ENSOSIG00000003335 ppme1 (ENSOSIG00000003340) ucp3 (ENSOSIG00000003345) ucp2 (ENSOSIG00000003349) Cyprinodontiformes ANCESTRAL SPECIES 11 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.a.a ENSGT01050000244864.B.a.g.a.a.b ENSGT00940000159451 ENSGT01050000245018 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b.d #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Aplocheiloidei ANCESTRAL SPECIES 33 ENSGT00940000166502 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.a.a ENSGT01050000244864.B.a.g.a.a.b ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b.d #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Mangrove rivulus MODERN SPECIES 270 ENSKMAG00000004876 ENSKMAG00000004890 amer1 (ENSKMAG00000004910) ZC3H12B (ENSKMAG00000004921) msna (ENSKMAG00000004941) B3GNT3 (ENSKMAG00000004982) AR (ENSKMAG00000004997) ENSKMAG00000005233 gjb1a (ENSKMAG00000005263) gja2 (ENSKMAG00000005284) gja2 (ENSKMAG00000005293) tbc1d8b (ENSKMAG00000005339) ENSKMAG00000005486 npas2 (ENSKMAG00000005526) BRWD3 (ENSKMAG00000005579) #22 TENT5D (ENSKMAG00000005667) #24 chmp1b (ENSKMAG00000005682) #25 rraga (ENSKMAG00000005709) CNGA2 (ENSKMAG00000005751) pls3 (ENSKMAG00000005776) ENSKMAG00000005837 ccdc61 (ENSKMAG00000005893) ENSKMAG00000005915 ppm1nb (ENSKMAG00000005937) rtn2b (ENSKMAG00000005961) nectin3b (ENSKMAG00000005978) ENSKMAG00000006003 ppme1 (ENSKMAG00000006028) Turquoise killifish MODERN SPECIES 1620 GAB3 (ENSNFUG00015021877) amer1 (ENSNFUG00015021872) ZC3H12B (ENSNFUG00015021869) MSNA (ENSNFUG00015020796) ENSNFUG00015020753 AR (ENSNFUG00015020749) OPHN1 (ENSNFUG00015018919) ENSNFUG00015018860 gjb1a (ENSNFUG00015018857) gja2 (ENSNFUG00015018852) ENSNFUG00015018850 TBC1D8B (ENSNFUG00015018216) C5HXORF57 (ENSNFUG00015018191) ENSNFUG00015018186 NPAS2 (ENSNFUG00015018169) BRWD3 (ENSNFUG00015017350) #22 TENT5D (ENSNFUG00015017317) #24 CHMP1B (ENSNFUG00015017278) #25 rraga (ENSNFUG00015017261) CNGA2 (ENSNFUG00015017253) pls3 (ENSNFUG00015017078) ATRX (ENSNFUG00015017044) CCDC61 (ENSNFUG00015017031) ENSNFUG00015017021 ENSNFUG00015017014 ENSNFUG00015017010 ENSNFUG00015016996 PPM1NB (ENSNFUG00015016986) rtn2b (ENSNFUG00015016982) nectin3b (ENSNFUG00015016977) PPME1 (ENSNFUG00015016962) Cyprinodontoidei ANCESTRAL SPECIES 5 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000235048 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.a.a ENSGT01050000244864.B.a.g.a.a.b ENSGT00940000159451 ENSGT01050000245018 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b.d #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Poeciliinae ANCESTRAL SPECIES 17 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000235048 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.a.a ENSGT01050000244864.B.a.g.a.a.b ENSGT01050000245018 ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b.d #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Platyfish MODERN SPECIES 2 ZC3H12B (ENSXMAG00000018548) msna (ENSXMAG00000018525) B3GNT3 (ENSXMAG00000027805) AR (ENSXMAG00000023442) OPHN1 (ENSXMAG00000021685) ENSXMAG00000029800 gjb1a (ENSXMAG00000029867) gja2 (ENSXMAG00000027392) gja2 (ENSXMAG00000021028) gja2 (ENSXMAG00000025383) gja2 (ENSXMAG00000027510) ENSXMAG00000028924 tbc1d8b (ENSXMAG00000023726) ENSXMAG00000012287 npas2 (ENSXMAG00000012189) BRWD3 (ENSXMAG00000012127) #22 TENT5D (ENSXMAG00000012123) #24 chmp1b (ENSXMAG00000012118) #25 rraga (ENSXMAG00000012105) CNGA2 (ENSXMAG00000028832) pls3 (ENSXMAG00000012062) ENSXMAG00000012039 ccdc61 (ENSXMAG00000012022) ENSXMAG00000012018 ppm1nb (ENSXMAG00000012008) rtn2b (ENSXMAG00000021539) nectin3b (ENSXMAG00000022318) ppme1 (ENSXMAG00000011978) ucp3 (ENSXMAG00000011950) ucp2 (ENSXMAG00000011949) dnajb13 (ENSXMAG00000011921) Poecilia ANCESTRAL SPECIES 7 ENSGT00940000166502 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01040000240566 ENSGT01050000244864.B.a.g.a.a.a ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b.d #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Guppy MODERN SPECIES 444 amer1 (ENSPREG00000020786) ZC3H12B (ENSPREG00000020794) msna (ENSPREG00000020812) ENSPREG00000020832 AR (ENSPREG00000020840) ENSPREG00000020861 gjb1a (ENSPREG00000020930) ENSPREG00000020937 gja2 (ENSPREG00000020947) ENSPREG00000020955 gja2 (ENSPREG00000020967) ENSPREG00000020977 tbc1d8b (ENSPREG00000021002) ENSPREG00000021030 npas2 (ENSPREG00000021052) BRWD3 (ENSPREG00000021090) #22 TENT5D (ENSPREG00000021126) #24 chmp1b (ENSPREG00000021134) #25 rraga (ENSPREG00000021154) CNGA2 (ENSPREG00000021190) pls3 (ENSPREG00000021205) ccdc61 (ENSPREG00000021232) ENSPREG00000021247 ppm1nb (ENSPREG00000021264) rtn2b (ENSPREG00000021273) nectin3b (ENSPREG00000021279) ENSPREG00000021287 ppme1 (ENSPREG00000021297) ucp3 (ENSPREG00000021314) ucp2 (ENSPREG00000021346) dnajb13 (ENSPREG00000021488) NAME_6 ANCESTRAL SPECIES 16 ENSGT00940000166439.d ENSGT00940000166502 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.a.a ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b.d #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00900000143377 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b Sailfin molly MODERN SPECIES 758 tbc1d8b (ENSPLAG00000007065) ENSPLAG00000006960 ENSPLAG00000006947 ENSPLAG00000006928 npas2 (ENSPLAG00000006839) BRWD3 (ENSPLAG00000006747) #22 TENT5D (ENSPLAG00000006567) #24 chmp1b (ENSPLAG00000006549) #25 rraga (ENSPLAG00000006541) CNGA2 (ENSPLAG00000006514) pls3 (ENSPLAG00000006463) ENSPLAG00000006423 ccdc61 (ENSPLAG00000006399) ENSPLAG00000006342 ppm1nb (ENSPLAG00000006327) rtn2b (ENSPLAG00000006307) Amazon molly DUPLICATION Amazon molly MODERN SPECIES 266 ENSPFOG00000019342 glra4b (ENSPFOG00000019344) aifm1 (ENSPFOG00000019351) ENSPFOG00000019357 amer1 (ENSPFOG00000020546) ZC3H12B (ENSPFOG00000019365) msna (ENSPFOG00000019370) ENSPFOG00000020547 AR (ENSPFOG00000019378) ENSPFOG00000019388 gjb1a (ENSPFOG00000019398) gja2 (ENSPFOG00000020548) tbc1d8b (ENSPFOG00000019408) ENSPFOG00000019420 npas2 (ENSPFOG00000019432) ENSPFOG00000019442 #22 TENT5D (ENSPFOG00000019451) #24 chmp1b (ENSPFOG00000019452) #25 rraga (ENSPFOG00000019453) CNGA2 (ENSPFOG00000019454) pls3 (ENSPFOG00000019459) ENSPFOG00000019467 ccdc61 (ENSPFOG00000019472) ENSPFOG00000019475 ppm1nb (ENSPFOG00000019480) rtn2b (ENSPFOG00000019484) ENSPFOG00000023643 nectin3b (ENSPFOG00000019487) ENSPFOG00000020549 ppme1 (ENSPFOG00000019491) ucp3 (ENSPFOG00000023273) Amazon molly MODERN SPECIES 619 kcnab1a (ENSPFOG00000004612) ENSPFOG00000004893 gmps (ENSPFOG00000005179) slc33a1 (ENSPFOG00000005401) rps6kb1b (ENSPFOG00000005577) tubd1 (ENSPFOG00000005581) vmp1 (ENSPFOG00000005645) ENSPFOG00000005842 ATM (ENSPFOG00000005882) TMPRSS2 (ENSPFOG00000022474) bace2 (ENSPFOG00000006331) DSCAM (ENSPFOG00000006723) ENSPFOG00000008069 sh3bgr (ENSPFOG00000008082) get1 (ENSPFOG00000008133) ENSPFOG00000021806 #22 NAME_4 ANCESTRAL SPECIES 5 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.a.a ENSGT01050000244864.B.a.g.a.a.b ENSGT00940000159451 ENSGT01050000245018 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b.d #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Mummichog MODERN SPECIES 2214 amer1 (ENSFHEG00000002400) ZC3H12B (ENSFHEG00000002391) msna (ENSFHEG00000002378) B3GNT3 (ENSFHEG00000002344) AR (ENSFHEG00000002341) ENSFHEG00000002337 gjb1a (ENSFHEG00000002331) ENSFHEG00000002329 gja2 (ENSFHEG00000002327) gja2 (ENSFHEG00000002323) gja2 (ENSFHEG00000002318) tbc1d8b (ENSFHEG00000002311) ENSFHEG00000002260 ENSFHEG00000002255 npas2 (ENSFHEG00000000074) BRWD3 (ENSFHEG00000002228) #22 TENT5D (ENSFHEG00000002162) #24 chmp1b (ENSFHEG00000002156) #25 rraga (ENSFHEG00000002145) CNGA2 (ENSFHEG00000002136) pls3 (ENSFHEG00000002131) ENSFHEG00000002109 ccdc61 (ENSFHEG00000002042) Sheepshead minnow MODERN SPECIES 310 ENSCVAG00000021298 samsn1b (ENSCVAG00000021311) ENSCVAG00000021317 usp25 (ENSCVAG00000021383) WSCD1 (ENSCVAG00000021400) ENSCVAG00000021412 tbc1d8b (ENSCVAG00000021437) ENSCVAG00000021549 npas2 (ENSCVAG00000000549) BRWD3 (ENSCVAG00000000553) #22 TENT5D (ENSCVAG00000021677) #24 chmp1b (ENSCVAG00000021707) #25 rraga (ENSCVAG00000021719) CNGA2 (ENSCVAG00000021898) PLS3 (ENSCVAG00000021938) ENSCVAG00000021948 ENSCVAG00000000868 ccdc61 (ENSCVAG00000022006) ENSCVAG00000022040 ppm1nb (ENSCVAG00000022080) rtn2b (ENSCVAG00000022112) nectin3b (ENSCVAG00000022118) ENSCVAG00000022131 ppme1 (ENSCVAG00000022154) ucp3 (ENSCVAG00000022170) Percomorphaceae_C ANCESTRAL SPECIES 10 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.a.a ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.b ENSGT01050000245018 ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b Percomorphaceae_D ANCESTRAL SPECIES 16 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.a.a ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.b ENSGT01050000245018 ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Carangaria ANCESTRAL SPECIES 16 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000235048 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.b ENSGT01050000245018 ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Carangaria_A ANCESTRAL SPECIES 8 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a ENSGT00940000155516.u ENSGT00940000160157.h ENSGT01030000234513.B.a.d ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.b ENSGT00940000159451 ENSGT01050000245018 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Barramundi perch MODERN SPECIES 94 aifm1 (ENSLCAG00010022282) ENSLCAG00010022524 amer1 (ENSLCAG00010022526) ZC3H12B (ENSLCAG00010022530) msna (ENSLCAG00010022676) B3GNT3 (ENSLCAG00010023358) AR (ENSLCAG00010023371) ENSLCAG00010023403 gjb1a (ENSLCAG00010023412) ENSLCAG00010023414 gja2 (ENSLCAG00010023418) tbc1d8b (ENSLCAG00010023424) ENSLCAG00010023435 ENSLCAG00010023440 npas2 (ENSLCAG00010023450) BRWD3 (ENSLCAG00010023517) #22 ENSLCAG00010023645 #24 chmp1b (ENSLCAG00010023659) #25 rraga (ENSLCAG00010023694) CNGA2 (ENSLCAG00010023703) pls3 (ENSLCAG00010023723) ENSLCAG00010023769 ccdc61 (ENSLCAG00010023777) ENSLCAG00010023781 ENSLCAG00010023787 ppm1nb (ENSLCAG00010023793) rtn2b (ENSLCAG00010023803) nectin3b (ENSLCAG00010023807) ppme1 (ENSLCAG00010023813) ucp3 (ENSLCAG00010023816) ucp2 (ENSLCAG00010023829) Seriola ANCESTRAL SPECIES 2 ENSGT00940000177367 ENSGT00950000183181.B.b.l.a ENSGT00940000178266 ENSGT00940000159055 ENSGT00390000009588 ENSGT00940000175043 ENSGT00390000006659 ENSGT00390000000083.b ENSGT00940000159985 ENSGT00390000002960.d ENSGT00940000157126.f ENSGT00940000159451 ENSGT01050000245018 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Greater amberjack MODERN SPECIES 139 ENSSDUG00000015566 ENSSDUG00000015554 ENSSDUG00000015549 ENSSDUG00000015534 AMOT (ENSSDUG00000015419) ska2 (ENSSDUG00000015396) riox2 (ENSSDUG00000015220) ENSSDUG00000015197 HLCS (ENSSDUG00000015168) ENSSDUG00000015131 KIRREL3 (ENSSDUG00000015095) ENSSDUG00000015085 tbc1d8b (ENSSDUG00000014998) ENSSDUG00000014948 npas2 (ENSSDUG00000014830) BRWD3 (ENSSDUG00000014605) #22 TENT5D (ENSSDUG00000014579) #24 chmp1b (ENSSDUG00000014560) #25 rraga (ENSSDUG00000014535) CNGA2 (ENSSDUG00000014515) pls3 (ENSSDUG00000014465) ENSSDUG00000014382 ccdc61 (ENSSDUG00000014355) ENSSDUG00000014265 ENSSDUG00000014243 ppm1nb (ENSSDUG00000014230) rtn2b (ENSSDUG00000014219) nectin3b (ENSSDUG00000014199) ENSSDUG00000014182 ENSSDUG00000014168 ppme1 (ENSSDUG00000014109) Yellowtail amberjack DUPLICATION Yellowtail amberjack MODERN SPECIES 2686 ENSSLDG00000014083 ENSSLDG00000014099 ENSSLDG00000014114 ENSSLDG00000014131 AMOT (ENSSLDG00000014165) ENSSLDG00000014209 tiprl (ENSSLDG00000014256) riox2 (ENSSLDG00000014285) ENSSLDG00000014306 HLCS (ENSSLDG00000014325) KIRREL3 (ENSSLDG00000014346) tbc1d8b (ENSSLDG00000014425) ENSSLDG00000014550 ENSSLDG00000014568 npas2 (ENSSLDG00000014599) ENSSLDG00000014679 #22 TENT5D (ENSSLDG00000014810) #24 chmp1b (ENSSLDG00000014820) #25 rraga (ENSSLDG00000014834) CNGA2 (ENSSLDG00000014847) pls3 (ENSSLDG00000014867) ENSSLDG00000014908 ccdc61 (ENSSLDG00000014972) ENSSLDG00000015015 ppm1nb (ENSSLDG00000015047) rtn2b (ENSSLDG00000015066) nectin3b (ENSSLDG00000015093) ppme1 (ENSSLDG00000015120) ucp3 (ENSSLDG00000015160) ucp2 (ENSSLDG00000015224) dnajb13 (ENSSLDG00000015253) Yellowtail amberjack MODERN SPECIES 167 ENSSLDG00000003642 #22 Pleuronectoidei ANCESTRAL SPECIES 27 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000159134.r.a.a ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000235048 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.b ENSGT01050000245018 ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B Turbot MODERN SPECIES 16 ENSSMAG00000017197 ENSSMAG00000000335 dnajb13 (ENSSMAG00000017271) ENSSMAG00000017308 ucp3 (ENSSMAG00000017321) PPME1 (ENSSMAG00000017329) ENSSMAG00000017343 nectin3b (ENSSMAG00000024608) rtn2b (ENSSMAG00000030216) ppm1nb (ENSSMAG00000017377) ENSSMAG00000017399 ENSSMAG00000017414 ENSSMAG00000030770 ENSSMAG00000017452 ENSSMAG00000017527 ENSSMAG00000017591 #22 ENSSMAG00000017782 #24 ENSSMAG00000017791 #25 ENSSMAG00000017797 ENSSMAG00000017821 ENSSMAG00000017842 ENSSMAG00000017957 ENSSMAG00000018004 ENSSMAG00000018062 ENSSMAG00000032400 tbc1d8b (ENSSMAG00000018089) ENSSMAG00000023654 ENSSMAG00000018212 ENSSMAG00000018216 gjb1a (ENSSMAG00000036106) ENSSMAG00000018235 Tongue sole MODERN SPECIES 10 ccdc61 (ENSCSEG00000014154) ENSCSEG00000014152 rraga (ENSCSEG00000014142) CNGA2 (ENSCSEG00000014115) pls3 (ENSCSEG00000014090) B3GNT3 (ENSCSEG00000014084) ENSCSEG00000014074 ENSCSEG00000014046 ENSCSEG00000014039 gjb1a (ENSCSEG00000014032) gja2 (ENSCSEG00000014029) ENSCSEG00000014026 tbc1d8b (ENSCSEG00000013993) ENSCSEG00000013963 npas2 (ENSCSEG00000013933) BRWD3 (ENSCSEG00000013874) #22 glra4b (ENSCSEG00000013727) aifm1 (ENSCSEG00000013706) ENSCSEG00000013695 amer1 (ENSCSEG00000013691) ZC3H12B (ENSCSEG00000013686) msna (ENSCSEG00000013618) ENSCSEG00000013571 msi2a (ENSCSEG00000013557) MSI2 (ENSCSEG00000013549) ENSCSEG00000013535 ENSCSEG00000013527 KSR1 (ENSCSEG00000013460) ENSCSEG00000013432 cbx5 (ENSCSEG00000013421) ENSCSEG00000013256 Anabantaria ANCESTRAL SPECIES 13 ENSGT00940000166502 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.a.a ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.b ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 ENSGT00940000158090 Anabantoidei ANCESTRAL SPECIES 12 ENSGT00940000166502 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.a.a ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.b ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 ENSGT00940000158090 Climbing perch MODERN SPECIES 5 ENSATEG00000010578 ENSATEG00000010646 ENSATEG00000011093 ENSATEG00000011150 ENSATEG00000011160 ENSATEG00000011175 ENSATEG00000011185 AR (ENSATEG00000011237) OPHN1 (ENSATEG00000011249) gjb1a (ENSATEG00000011272) ENSATEG00000025360 ENSATEG00000026979 tbc1d8b (ENSATEG00000011324) ENSATEG00000011419 ENSATEG00000011497 ENSATEG00000011566 #22 ENSATEG00000011859 #24 ENSATEG00000027417 #25 ENSATEG00000011885 ENSATEG00000011912 ENSATEG00000012033 ENSATEG00000012096 ENSATEG00000029657 ENSATEG00000012119 ENSATEG00000012175 ENSATEG00000012223 ppm1nb (ENSATEG00000012234) rtn2b (ENSATEG00000012255) nectin3b (ENSATEG00000012282) PPME1 (ENSATEG00000012360) ucp3 (ENSATEG00000012397) Siamese fighting fish MODERN SPECIES 5 msi2a (ENSBSLG00000018598) ENSBSLG00000018578 ENSBSLG00000018544 ENSBSLG00000018499 aifm1 (ENSBSLG00000017327) amer1 (ENSBSLG00000017258) ZC3H12B (ENSBSLG00000017245) msna (ENSBSLG00000016550) AR (ENSBSLG00000016481) OPHN1 (ENSBSLG00000016450) gjb1a (ENSBSLG00000016438) gja2 (ENSBSLG00000016437) tbc1d8b (ENSBSLG00000016302) ENSBSLG00000016288 npas2 (ENSBSLG00000016275) BRWD3 (ENSBSLG00000015744) #22 ENSBSLG00000015702 #24 chmp1b (ENSBSLG00000015658) #25 rraga (ENSBSLG00000015604) CNGA2 (ENSBSLG00000015275) pls3 (ENSBSLG00000015077) ENSBSLG00000015043 ENSBSLG00000015034 ENSBSLG00000015012 ENSBSLG00000015007 ppm1nb (ENSBSLG00000014891) rtn2b (ENSBSLG00000014699) nectin3b (ENSBSLG00000014643) ppme1 (ENSBSLG00000014449) ucp3 (ENSBSLG00000014434) dnajb13 (ENSBSLG00000014411) Zig-zag eel MODERN SPECIES 5 ENSMAMG00000027967 ENSMAMG00000010608 ENSMAMG00000011728 ENSMAMG00000011741 ENSMAMG00000011753 ENSMAMG00000011770 ENSMAMG00000011776 AR (ENSMAMG00000011824) OPHN1 (ENSMAMG00000011855) gjb1a (ENSMAMG00000010069) ENSMAMG00000024823 ENSMAMG00000026649 tbc1d8b (ENSMAMG00000011899) ENSMAMG00000011969 ENSMAMG00000011983 ENSMAMG00000012051 #22 ENSMAMG00000012072 #24 ENSMAMG00000012081 #25 ENSMAMG00000012091 ENSMAMG00000012107 ENSMAMG00000012123 ENSMAMG00000012149 ENSMAMG00000012238 ENSMAMG00000012287 ENSMAMG00000012300 rtn2b (ENSMAMG00000012348) ENSMAMG00000026359 ppm1nb (ENSMAMG00000012336) nectin3b (ENSMAMG00000024393) PPME1 (ENSMAMG00000012372) ucp3 (ENSMAMG00000012405) Eupercaria ANCESTRAL SPECIES 17 ENSGT00940000166502 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.a.a ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.b ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b Tetraodontidae ANCESTRAL SPECIES 6 ENSGT00940000166439 ENSGT00940000166502 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000235048 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.b ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Fugu MODERN SPECIES 6 nufip2 (ENSTRUG00000011736) glra4b (ENSTRUG00000011755) aifm1 (ENSTRUG00000011928) ENSTRUG00000024861 amer1 (ENSTRUG00000024134) ZC3H12B (ENSTRUG00000012186) msna (ENSTRUG00000012243) AR (ENSTRUG00000012421) OPHN1 (ENSTRUG00000012554) ENSTRUG00000022533 gjb1a (ENSTRUG00000012976) gja2 (ENSTRUG00000012999) tbc1d8b (ENSTRUG00000013007) ENSTRUG00000013243 npas2 (ENSTRUG00000013269) BRWD3 (ENSTRUG00000013452) #22 ENSTRUG00000027268 #24 chmp1b (ENSTRUG00000013745) #25 rraga (ENSTRUG00000013796) CNGA2 (ENSTRUG00000013886) pls3 (ENSTRUG00000013960) ccdc61 (ENSTRUG00000014187) ENSTRUG00000014239 ENSTRUG00000014245 ppm1nb (ENSTRUG00000014288) rtn8 (ENSTRUG00000014329) nectin3b (ENSTRUG00000020511) ppme1 (ENSTRUG00000014414) ucp3 (ENSTRUG00000014470) ucp2 (ENSTRUG00000014496) dnajb13 (ENSTRUG00000014519) Tetraodon MODERN SPECIES 22 ENSTNIG00000011830 ENSTNIG00000011829 ZC3H12B (ENSTNIG00000011828) msna (ENSTNIG00000011827) AR (ENSTNIG00000011826) OPHN1 (ENSTNIG00000001569) gjb1a (ENSTNIG00000011825) gja2 (ENSTNIG00000011824) tbc1d8b (ENSTNIG00000011823) npas2 (ENSTNIG00000011822) ENSTNIG00000011821 ENSTNIG00000001143 gbp (ENSTNIG00000011820) syt11b (ENSTNIG00000011818) ENSTNIG00000011817 BRWD3 (ENSTNIG00000011816) #22 ENSTNIG00000011815 #24 rraga (ENSTNIG00000011814) CNGA2 (ENSTNIG00000011813) PLS3 (ENSTNIG00000011812) ENSTNIG00000011811 ccdc61 (ENSTNIG00000011810) ENSTNIG00000011809 ENSTNIG00000001363 ppm1nb (ENSTNIG00000011808) rtn2b (ENSTNIG00000011807) nectin3b (ENSTNIG00000011806) ppme1 (ENSTNIG00000011805) ucp3 (ENSTNIG00000011804) ucp2 (ENSTNIG00000011803) dnajb13 (ENSTNIG00000011802) Eupecaria_A ANCESTRAL SPECIES 17 ENSGT00940000166502 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01050000244864.B.a.g.a.b ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.a.a ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b Eupecaria_B ANCESTRAL SPECIES 17 ENSGT00940000166502 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.b ENSGT01050000244864.B.a.g.a.a.a ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b Eupecaria_C ANCESTRAL SPECIES 15 ENSGT00940000166439 ENSGT00940000166502 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.b ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 Eupercaria_incertae_sedis ANCESTRAL SPECIES 12 ENSGT00940000166439 ENSGT00940000166502 ENSGT00940000156455 ENSGT00940000159803 ENSGT00530000063529.B ENSGT00940000159316 ENSGT01090000260082.d.a.a.d ENSGT00940000155516.u ENSGT00940000160157 ENSGT01030000234513.B.a.d ENSGT01030000235048 ENSGT01050000244864.B.a.g.a.b ENSGT00940000159451 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b ENSGT00940000159524 European seabass MODERN SPECIES 4 ENSDLAG00005022002 ENSDLAG00005022017 ENSDLAG00005022044 ENSDLAG00005033865 ENSDLAG00005022344 ENSDLAG00005022345 ENSDLAG00005022363 AR (ENSDLAG00005022649) OPHN1 (ENSDLAG00005022730) gjb1a (ENSDLAG00005028745) ENSDLAG00005022762 ENSDLAG00005030425 tbc1d8b (ENSDLAG00005022776) ENSDLAG00005022852 ENSDLAG00005022872 ENSDLAG00005023076 #22 ENSDLAG00005030377 #24 ENSDLAG00005024108 #25 ENSDLAG00005024163 ENSDLAG00005024186 ENSDLAG00005024221 ENSDLAG00005024310 ENSDLAG00005024326 ENSDLAG00005034145 ppm1nb (ENSDLAG00005024351) rtn2b (ENSDLAG00005028902) nectin3b (ENSDLAG00005024357) ENSDLAG00005028878 PPME1 (ENSDLAG00005024361) ucp3 (ENSDLAG00005024375) ENSDLAG00005024379 Large yellow croaker MODERN SPECIES 493 msi2a (ENSLCRG00005023379) ENSLCRG00005023384 glra4b (ENSLCRG00005023387) aifm1 (ENSLCRG00005023395) ENSLCRG00005023455 amer1 (ENSLCRG00005023457) ZC3H12B (ENSLCRG00005023461) msna (ENSLCRG00005023471) ar (ENSLCRG00005023491) OPHN1 (ENSLCRG00005023509) gjb1a (ENSLCRG00005023577) gja2 (ENSLCRG00005023578) tbc1d8b (ENSLCRG00005023579) ENSLCRG00005023602 npas2 (ENSLCRG00005023607) BRWD3 (ENSLCRG00005023625) #22 ENSLCRG00005023686 #24 chmp1b (ENSLCRG00005023689) #25 rraga (ENSLCRG00005023691) CNGA2 (ENSLCRG00005009273) pls3 (ENSLCRG00005009304) ENSLCRG00005009339 ccdc61 (ENSLCRG00005009345) ENSLCRG00005009346 ENSLCRG00005009356 ppm1nb (ENSLCRG00005009357) rtn2b (ENSLCRG00005009358) nectin3b (ENSLCRG00005009359) ppme1 (ENSLCRG00005009360) ucp3 (ENSLCRG00005009430) dnajb13 (ENSLCRG00005009435) Gilthead seabream MODERN SPECIES 4 ENSSAUG00010011601 glra4b (ENSSAUG00010011603) aifm1 (ENSSAUG00010011631) ENSSAUG00010014634 amer1 (ENSSAUG00010014636) ZC3H12B (ENSSAUG00010014639) msna (ENSSAUG00010014671) AR (ENSSAUG00010017493) OPHN1 (ENSSAUG00010017788) gjb1a (ENSSAUG00010017862) ENSSAUG00010017863 gja2 (ENSSAUG00010017864) tbc1d8b (ENSSAUG00010017869) ENSSAUG00010018027 npas2 (ENSSAUG00010018036) BRWD3 (ENSSAUG00010018048) #22 TENT5D (ENSSAUG00010018495) #24 chmp1b (ENSSAUG00010018500) #25 rraga (ENSSAUG00010018504) CNGA2 (ENSSAUG00010018859) pls3 (ENSSAUG00010018866) ENSSAUG00010019141 ccdc61 (ENSSAUG00010019150) ENSSAUG00010019154 ENSSAUG00010019156 ppm1nb (ENSSAUG00010019158) rtn2b (ENSSAUG00010019160) nectin3b (ENSSAUG00010019163) ENSSAUG00010019166 ppme1 (ENSSAUG00010019170) UCP3 (ENSSAUG00010019174) Perciformes ANCESTRAL SPECIES 22 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b Perciformes_a ANCESTRAL SPECIES 20 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b Pike perch MODERN SPECIES 37 msi2a (ENSSLUG00000021428) ENSSLUG00000021510 glra4b (ENSSLUG00000021515) ENSSLUG00000021523 aifm1 (ENSSLUG00000021611) tbc1d8b (ENSSLUG00000022999) gja2 (ENSSLUG00000023115) gjb1a (ENSSLUG00000023118) OPHN1 (ENSSLUG00000023131) AR (ENSSLUG00000023157) msna (ENSSLUG00000023208) ZC3H12B (ENSSLUG00000023727) amer1 (ENSSLUG00000023745) ENSSLUG00000023754 npas2 (ENSSLUG00000023767) BRWD3 (ENSSLUG00000023898) #22 ENSSLUG00000024228 #24 chmp1b (ENSSLUG00000024231) #25 rraga (ENSSLUG00000024238) CNGA2 (ENSSLUG00000024248) pls3 (ENSSLUG00000024284) ENSSLUG00000024344 ccdc61 (ENSSLUG00000024355) ENSSLUG00000024367 ENSSLUG00000024372 ppm1nb (ENSSLUG00000024380) rtn2b (ENSSLUG00000024386) nectin3b (ENSSLUG00000024391) ppme1 (ENSSLUG00000024399) ucp3 (ENSSLUG00000024409) ucp2 (ENSSLUG00000024417) Channel bull blenny MODERN SPECIES 5 gucy2d (ENSCGOG00000019513) ENSCGOG00000019899 slc12a9 (ENSCGOG00000019913) gnb2 (ENSCGOG00000019952) mink1 (ENSCGOG00000020972) PLD2 (ENSCGOG00000023947) chrne (ENSCGOG00000024199) gltpd2b (ENSCGOG00000024215) atp1b2b (ENSCGOG00000024218) ENSCGOG00000024224 mogat3b (ENSCGOG00000024228) srrt (ENSCGOG00000024250) ENSCGOG00000024294 ENSCGOG00000024296 npas2 (ENSCGOG00000024300) BRWD3 (ENSCGOG00000024317) #22 ENSCGOG00000024362 #24 chmp1b (ENSCGOG00000024367) #25 rraga (ENSCGOG00000024379) CNGA2 (ENSCGOG00000001610) pls3 (ENSCGOG00000001761) ENSCGOG00000003092 ccdc61 (ENSCGOG00000003222) ENSCGOG00000003237 ENSCGOG00000003247 ppm1nb (ENSCGOG00000003254) rtn2b (ENSCGOG00000003259) nectin3b (ENSCGOG00000003276) ENSCGOG00000003278 ppme1 (ENSCGOG00000003288) ucp3 (ENSCGOG00000003387) Cottioidei ANCESTRAL SPECIES 10 ENSGT00940000160414.d ENSGT00940000166502 ENSGT00940000156455 ENSGT00940000159451 ENSGT01050000244864.B.a.g.a.a.a ENSGT01030000235048 ENSGT01030000234513.B.a.d ENSGT00940000160157 ENSGT00940000155516.u ENSGT01090000260082.d.a.a.d ENSGT00940000159316 ENSGT00530000063529.B ENSGT00940000159803 ENSGT00390000005094.g ENSGT00940000164304 ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000166868.a ENSGT00940000164695.b ENSGT00940000160599 ENSGT00940000156028.t ENSGT00940000163093.a.a ENSGT00390000004396.g ENSGT00940000165592.b Lumpfish MODERN SPECIES 5 ENSCLMG00005020527 glra4b (ENSCLMG00005020526) aifm1 (ENSCLMG00005019575) tbc1d8b (ENSCLMG00005019549) gja2 (ENSCLMG00005019548) ENSCLMG00005019547 gjb1a (ENSCLMG00005019546) OPHN1 (ENSCLMG00005019542) AR (ENSCLMG00005019538) msna (ENSCLMG00005019528) ZC3H12B (ENSCLMG00005019519) amer1 (ENSCLMG00005019515) ENSCLMG00005019513 ENSCLMG00005019462 npas2 (ENSCLMG00005019449) BRWD3 (ENSCLMG00005019270) #22 ENSCLMG00005019268 #24 chmp1b (ENSCLMG00005019262) #25 rraga (ENSCLMG00005019261) CNGA2 (ENSCLMG00005019252) pls3 (ENSCLMG00005019222) ccdc61 (ENSCLMG00005019209) ENSCLMG00005019207 ppm1nb (ENSCLMG00005019203) rtn2b (ENSCLMG00005019197) nectin3b (ENSCLMG00005019188) ENSCLMG00005019183 ppme1 (ENSCLMG00005019180) ucp3 (ENSCLMG00005019178) ucp2 (ENSCLMG00005019177) dnajb13 (ENSCLMG00005019174) Stickleback MODERN SPECIES 7 ENSGACG00000020324 KDM6B (ENSGACG00000020325) glra4b (ENSGACG00000020326) aifm1 (ENSGACG00000020327) tbc1d8b (ENSGACG00000020328) gja2 (ENSGACG00000020329) gjb1a (ENSGACG00000020330) OPHN1 (ENSGACG00000020331) AR (ENSGACG00000020332) msna (ENSGACG00000020333) ZC3H12B (ENSGACG00000020334) ENSGACG00000020335 ENSGACG00000020336 ENSGACG00000020337 npas2 (ENSGACG00000020338) BRWD3 (ENSGACG00000020339) #22 ENSGACG00000020340 #24 chmp1b (ENSGACG00000020341) #25 rraga (ENSGACG00000020342) CNGA2 (ENSGACG00000020343) pls3 (ENSGACG00000020344) ENSGACG00000020345 ccdc61 (ENSGACG00000020346) ENSGACG00000020347 ENSGACG00000020348 ppm1nb (ENSGACG00000020349) rtn2b (ENSGACG00000020350) nectin3b (ENSGACG00000020351) ENSGACG00000020352 ppme1 (ENSGACG00000020353) ucp2 (ENSGACG00000020354) Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 30 GAB3 (ENSLBEG00000006473) amer1 (ENSLBEG00000006461) ZC3H12B (ENSLBEG00000006448) msna (ENSLBEG00000006335) ENSLBEG00000006308 ENSLBEG00000006283 ENSLBEG00000005273 OPHN1 (ENSLBEG00000005012) gjb1a (ENSLBEG00000004972) ENSLBEG00000004949 tbc1d8b (ENSLBEG00000004830) ENSLBEG00000004793 ENSLBEG00000004766 npas2 (ENSLBEG00000004731) ENSLBEG00000004703 ENSLBEG00000004609 #22 ENSLBEG00000004564 #24 chmp1b (ENSLBEG00000004523) #25 rraga (ENSLBEG00000004506) CNGA2 (ENSLBEG00000004471) pls3 (ENSLBEG00000004402) ENSLBEG00000004332 ccdc61 (ENSLBEG00000004190) ENSLBEG00000004045 ENSLBEG00000004006 ppm1nb (ENSLBEG00000003976) rtn2b (ENSLBEG00000003954) nectin3b (ENSLBEG00000003938) ENSLBEG00000003914 ppme1 (ENSLBEG00000003868) ucp3 (ENSLBEG00000003840) Ballan wrasse MODERN SPECIES 4526 ENSLBEG00000028968 ##22 ENSLBEG00000028969 #22 Protacanthopterygii ANCESTRAL SPECIES 11 ENSGT00940000156017.eb #20 ENSGT00980000199388 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT01100000263536.B.c.b #34 ENSGT01100000263512.a.a.a.a ENSGT00550000075160 ENSGT00510000047733 ENSGT00950000182915.a.b ENSGT00940000155374.g.b ENSGT00950000183097.a.a.a.f.a.b ENSGT00390000012030.b.a ENSGT00950000183107.a.b.b #22 ENSGT00940000162488.b.a #24 ENSGT00950000182832.D.b #25 ENSGT00950000183031.B ENSGT00940000167119 ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a ENSGT00940000155902.d ENSGT00990000203619.B.a.b ENSGT00940000154133.B ENSGT00940000160033.d ENSGT00940000175813 ENSGT00570000080851 ENSGT00390000003107.b.i ENSGT01080000257562 ENSGT00610000087474 Northern pike DUPLICATION Northern pike MODERN SPECIES 6 las1l (ENSELUG00000010702) ZC3H12B (ENSELUG00000010689) mtmr8 (ENSELUG00000010673) amer1 (ENSELUG00000010651) ENSELUG00000030517 ENSELUG00000000382 ENSELUG00000010552 smarca1 (ENSELUG00000010515) TENM1 (ENSELUG00000000375) agtr2 (ENSELUG00000010162) ENSELUG00000033753 #11 ENSELUG00000010102 ENSELUG00000009993 #19 sh3bgrl (ENSELUG00000009941) #20 ENSELUG00000028905 #22 BRWD3 (ENSELUG00000009859) #22 TENT5D (ENSELUG00000026169) #24 chmp1b (ENSELUG00000009678) #25 rraga (ENSELUG00000009655) ENSELUG00000009623 CNGA2 (ENSELUG00000009608) pls3 (ENSELUG00000009594) ENSELUG00000000351 ENSELUG00000009509 ccdc61 (ENSELUG00000009476) ENSELUG00000009424 ENSELUG00000009408 ENSELUG00000009386 QPCTL (ENSELUG00000001370) ENSELUG00000009334 si:ch211-191j22.3 (ENSELUG00000031664) Northern pike MODERN SPECIES 6 msna (ENSELUG00000010743) las1l (ENSELUG00000010702) ZC3H12B (ENSELUG00000010689) mtmr8 (ENSELUG00000010673) amer1 (ENSELUG00000010651) ENSELUG00000030517 ENSELUG00000000382 ENSELUG00000010552 smarca1 (ENSELUG00000010515) TENM1 (ENSELUG00000000375) agtr2 (ENSELUG00000010162) ENSELUG00000033753 #11 ENSELUG00000010102 ENSELUG00000009993 #19 sh3bgrl (ENSELUG00000009941) #20 ENSELUG00000028905 #22 BRWD3 (ENSELUG00000009859) #22 TENT5D (ENSELUG00000026169) #24 chmp1b (ENSELUG00000009678) #25 rraga (ENSELUG00000009655) ENSELUG00000009623 CNGA2 (ENSELUG00000009608) pls3 (ENSELUG00000009594) ENSELUG00000000351 ENSELUG00000009509 ccdc61 (ENSELUG00000009476) ENSELUG00000009424 ENSELUG00000009408 ENSELUG00000009386 QPCTL (ENSELUG00000001370) ENSELUG00000009334 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 38 ENSGT00940000159316.xb.a ENSGT00940000157443.c ENSGT00940000162717.b ENSGT00940000153902.b.a.b ENSGT00530000063529.B.a ENSGT00940000154103.b.f ENSGT00940000159803.n ENSGT00940000157297.n.b ENSGT01030000234566.e.b.b.b.a ENSGT00940000155920.l ENSGT01050000244888.b.a.c.a.b ENSGT00530000063666.a.gb #11 ENSGT00940000164237.g ENSGT00390000011425.A.d #19 ENSGT00940000156017.eb.a.b #20 ENSGT00950000183107.a.b.b.q.a #22 ENSGT00940000162488.b.a.b #24 ENSGT00950000182832.D.b.gc #25 ENSGT00950000183031.B ENSGT00940000161737 ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a.a ENSGT00940000155902.d.c.a ENSGT00990000203619.B.a.b.a ENSGT00940000154133.B.e ENSGT00940000160033.d.c ENSGT00940000159183.v.a ENSGT00570000080851 ENSGT00390000003107.b.i.b ENSGT00940000177260.b ENSGT01080000257562.b Salmoninae_a ANCESTRAL SPECIES 24 ENSGT00940000159316.xb.a ENSGT00940000157443.c ENSGT00940000162717.b ENSGT00940000153902.b.a.b ENSGT00530000063529.B.a ENSGT00940000154103.b.f ENSGT00940000159803.n ENSGT00940000157297.n.b ENSGT01030000234566.e.b.b.b.a ENSGT00940000155920.l ENSGT01050000244888.b.a.c.a.b ENSGT00530000063666.a.gb #11 ENSGT00940000164237.g ENSGT00390000011425.A.d #19 ENSGT00940000156017.eb.a.b #20 ENSGT00950000183107.a.b.b.q.a #22 ENSGT00940000162488.b.a.b #24 ENSGT00950000182832.D.b.gc #25 ENSGT00950000183031.B ENSGT00940000161737 ENSGT00950000183097.a.a.a.f.a.a.b ENSGT00940000155902.d.c.b ENSGT00990000203619.B.a.b.b ENSGT00940000154133.B.f ENSGT00940000160033.d.d ENSGT00940000159183.v.b ENSGT00940000175813 ENSGT00390000003107.b.i.a ENSGT00940000177260.a ENSGT01080000257562.a ENSGT00610000087474 Oncorhynchus ANCESTRAL SPECIES 21 ENSGT00390000014785 ENSGT00940000159316.xb.a ENSGT00940000157443.c ENSGT00940000162717.b ENSGT00530000063529.B.a ENSGT00940000154103.b.f ENSGT00940000159803.n ENSGT00940000157297.n.b ENSGT01030000234566.e.b.b.b.a ENSGT00940000155920.l ENSGT01050000244888.b.a.c.a.b ENSGT00530000063666.a.gb #11 ENSGT00940000164237.g ENSGT00390000011425.A.d #19 ENSGT00940000156017.eb.a.b #20 ENSGT00950000183107.a.b.b.q.a #22 ENSGT00940000162488.b.a.b #24 ENSGT00950000182832.D.b.gc #25 ENSGT00950000183031.B ENSGT00940000162863 ENSGT00950000183097.a.a.a.f.a.a.b ENSGT00940000155902.d.c.b ENSGT00990000203619.B.a.b.b ENSGT00940000154133.B.f ENSGT00940000160033.d.d ENSGT00940000159183.v.b ENSGT00940000175813 ENSGT00390000003107.b.i.a ENSGT00940000177260.a ENSGT01080000257562.a ENSGT00610000087474 Oncorhynchus_a ANCESTRAL SPECIES 19 ENSGT00390000014785 ENSGT00940000159316.xb.a ENSGT00940000157443.c ENSGT00940000162717.b ENSGT00530000063529.B.a ENSGT00940000154103.b.f ENSGT00940000159803.n ENSGT00940000157297.n.b ENSGT01030000234566.e.b.b.b.a ENSGT00940000155920.l ENSGT01050000244888.b.a.c.a.b ENSGT00530000063666.a.gb #11 ENSGT00940000164237.g ENSGT00390000011425.A.d #19 ENSGT00940000156017.eb.a.b #20 ENSGT00950000183107.a.b.b.q.a #22 ENSGT00940000162488.b.a.b #24 ENSGT00950000182832.D.b.gc #25 ENSGT00950000183031.B ENSGT00940000162863 ENSGT00950000183097.a.a.a.f.a.a.b ENSGT00940000155902.d.c.b ENSGT00990000203619.B.a.b.b ENSGT00940000154133.B.f ENSGT00940000160033.d.d ENSGT00940000159183.v.b ENSGT00940000175813 ENSGT00390000003107.b.i.a ENSGT00940000177260.a ENSGT01080000257562.a ENSGT00610000087474 Coho salmon MODERN SPECIES 26 ENSOKIG00005049862 msna (ENSOKIG00005049926) las1l (ENSOKIG00005050112) ZC3H12B (ENSOKIG00005050116) shisa2a (ENSOKIG00005050119) ENSOKIG00005050122 amer1 (ENSOKIG00005050127) ARHGEF9 (ENSOKIG00005050164) ENSOKIG00005050220 smarca1 (ENSOKIG00005050230) TENM1 (ENSOKIG00005050305) sh2d1aa (ENSOKIG00005050371) ENSOKIG00005050392 ENSOKIG00005050425 #19 SH3BGRL (ENSOKIG00005050429) #20 BRWD3 (ENSOKIG00005050476) #22 TENT5D (ENSOKIG00005050501) #24 CHMP1B (ENSOKIG00005050507) #25 rraga (ENSOKIG00005050509) ENSOKIG00005050517 PLS3 (ENSOKIG00005050534) ENSOKIG00005050561 ENSOKIG00005050564 ENSOKIG00005050567 ccdc61 (ENSOKIG00005050572) ENSOKIG00005050576 ENSOKIG00005050579 QPCTL (ENSOKIG00005050582) ENSOKIG00005050588 si:ch211-191j22.3 (ENSOKIG00005050591) ENSOKIG00005050597 Chinook salmon MODERN SPECIES 33 las1l (ENSOTSG00005027734) ZC3H12B (ENSOTSG00005027736) shisa2a (ENSOTSG00005027737) amer1 (ENSOTSG00005001140) arhgef9b (ENSOTSG00005001039) ENSOTSG00005001142 smarca1 (ENSOTSG00005001182) TENM1 (ENSOTSG00005001397) ENSOTSG00005009257 ENSOTSG00005009258 agtr2 (ENSOTSG00005009260) apool (ENSOTSG00005009261) #11 ENSOTSG00005009267 ENSOTSG00005009440 #19 sh3bgrl (ENSOTSG00005009441) #20 BRWD3 (ENSOTSG00005009448) #22 TENT5D (ENSOTSG00005012086) #24 chmp1b (ENSOTSG00005012087) #25 rraga (ENSOTSG00005012090) PLS3 (ENSOTSG00005012096) ENSOTSG00005012255 ccdc61 (ENSOTSG00005012260) ENSOTSG00005012263 ENSOTSG00005012266 ENSOTSG00005012268 QPCTL (ENSOTSG00005012271) ENSOTSG00005012273 ENSOTSG00005012275 si:ch211-191j22.3 (ENSOTSG00005012276) ENSOTSG00005012279 ENSOTSG00005012280 Salmo ANCESTRAL SPECIES 13 ENSGT00390000014785 ENSGT00940000159316.xb.a ENSGT00940000157443.c ENSGT00940000153902.b.a.b ENSGT00530000063529.B.a ENSGT00940000154103.b.f ENSGT00940000159803.n ENSGT00940000157297.n.b ENSGT01030000234566.e.b.b.b.a ENSGT00940000155920.l ENSGT01050000244888.b.a.c.a.b ENSGT00530000063666.a.gb #11 ENSGT00940000164237.g ENSGT00390000011425.A.d #19 ENSGT00940000156017.eb.a.b #20 ENSGT00950000183107.a.b.b.q.a #22 ENSGT00940000162488.b.a.b #24 ENSGT00950000182832.D.b.gc #25 ENSGT00950000183031.B ENSGT00940000161737 ENSGT00950000183097.a.a.a.f.a.a.b ENSGT00940000155902.d.c.b ENSGT00990000203619.B.a.b.b ENSGT00940000154133.B.f ENSGT00940000160033.d.d ENSGT00940000159183.v.b ENSGT00390000003107.b.i.a ENSGT01080000257562.a ENSGT00610000087474 ENSGT00940000166868.a.f ENSGT00940000164695.b.f River trout MODERN SPECIES 6 ZC3H12B (ENSSTUG00000024895) shisa2a (ENSSTUG00000024888) ENSSTUG00000024883 asb12a (ENSSTUG00000024880) amer1 (ENSSTUG00000024872) ARHGEF9 (ENSSTUG00000023916) ENSSTUG00000023870 smarca1 (ENSSTUG00000023581) TENM1 (ENSSTUG00000023466) sh2d1aa (ENSSTUG00000023451) agtr2 (ENSSTUG00000023443) apool (ENSSTUG00000023431) #11 ENSSTUG00000023313 ENSSTUG00000023305 #19 sh3bgrl (ENSSTUG00000023208) #20 BRWD3 (ENSSTUG00000022462) #22 TENT5D (ENSSTUG00000022443) #24 chmp1b (ENSSTUG00000021989) #25 rraga (ENSSTUG00000021952) nup62l (ENSSTUG00000021905) PLS3 (ENSSTUG00000019482) ATRX (ENSSTUG00000019370) ENSSTUG00000019364 ccdc61 (ENSSTUG00000019310) ENSSTUG00000019296 ENSSTUG00000019282 QPCTL (ENSSTUG00000019277) ENSSTUG00000019267 si:ch211-191j22.3 (ENSSTUG00000019261) ENSSTUG00000019253 ppm1nb (ENSSTUG00000019240) Huchen MODERN SPECIES 2 shisa2a (ENSHHUG00000016042) mtmr8 (ENSHHUG00000016052) amer1 (ENSHHUG00000016089) ARHGEF9 (ENSHHUG00000016097) ENSHHUG00000016217 smarca1 (ENSHHUG00000016236) TENM1 (ENSHHUG00000016311) sh2d1aa (ENSHHUG00000016945) ENSHHUG00000016955 ENSHHUG00000016965 ENSHHUG00000016969 ENSHHUG00000016973 ENSHHUG00000016976 ENSHHUG00000016979 #19 sh3bgrl (ENSHHUG00000016983) #20 ENSHHUG00000017069 #22 ENSHHUG00000017162 #24 chmp1b (ENSHHUG00000017165) #25 rraga (ENSHHUG00000017302) ENSHHUG00000017324 PLS3 (ENSHHUG00000017418) ENSHHUG00000017923 ENSHHUG00000017954 ccdc61 (ENSHHUG00000017958) ENSHHUG00000017970 ENSHHUG00000017977 QPCTL (ENSHHUG00000017984) ENSHHUG00000017991 ENSHHUG00000017994 si:ch211-191j22.3 (ENSHHUG00000017995) ENSHHUG00000018000 Salmoninae ANCESTRAL SPECIES 690 ENSGT00940000160622.`b.b ENSGT00940000159803.m ENSGT00940000157297.n.a ENSGT01030000234566.e.b.b.b.b ENSGT01000000217261 ENSGT01050000244888.b.a.c.a.a ENSGT00530000063666.a.fb #11 ENSGT00940000164237.h ENSGT00390000011425.A.c #19 ENSGT00940000156017.eb.a.a #20 ENSGT00950000183107.a.b.b.q.b #22 ENSGT00940000162488.b.a.a #24 ENSGT00950000182832.D.b.fc #25 Salmoninae_a ANCESTRAL SPECIES 4 ENSGT00990000212008 ENSGT00940000159316.xb.b ENSGT00940000162717.a ENSGT00940000153902.b.a.a ENSGT00530000063529.B.b ENSGT00940000160622.`b.b ENSGT00940000159803.m ENSGT00940000157297.n.a ENSGT01030000234566.e.b.b.b.b ENSGT01000000217261 ENSGT01050000244888.b.a.c.a.a ENSGT00530000063666.a.fb #11 ENSGT00940000164237.h ENSGT00390000011425.A.c #19 ENSGT00940000156017.eb.a.a #20 ENSGT00950000183107.a.b.b.q.b #22 ENSGT00940000162488.b.a.a #24 ENSGT00950000182832.D.b.fc #25 ENSGT00940000167119 ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a.a ENSGT00940000155902.d.c.a ENSGT00990000203619.B.a.b.a ENSGT00940000154133.B.e ENSGT00940000160033.d.c ENSGT00940000159183.v.a ENSGT00570000080851 ENSGT00390000003107.b.i.b ENSGT01080000257562.b ENSGT00940000166868.a.e ENSGT00940000164695.b.e Oncorhynchus ANCESTRAL SPECIES 4 ENSGT01090000260082.d.a.a.d.c ENSGT00940000159316.xb.b ENSGT00940000162717.a ENSGT00940000153902.b.a.a ENSGT00530000063529.B.b ENSGT00940000160622.`b.b ENSGT00940000159803.m ENSGT00940000157297.n.a ENSGT01030000234566.e.b.b.b.b ENSGT01000000217261 ENSGT01050000244888.b.a.c.a.a ENSGT00530000063666.a.fb #11 ENSGT00940000164237.h ENSGT00390000011425.A.c #19 ENSGT00940000156017.eb.a.a #20 ENSGT00950000183107.a.b.b.q.b #22 ENSGT00940000162488.b.a.a #24 ENSGT00950000182832.D.b.fc #25 ENSGT00940000161737 ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a.a ENSGT00940000155902.d.c.a ENSGT00990000203619.B.a.b.a ENSGT00940000159183.v.a ENSGT00570000080851 ENSGT00390000003107.b.i.b ENSGT01080000257562.b ENSGT00940000166868.a.e ENSGT00940000164695.b.e ENSGT00940000160599.s ENSGT00940000159399.c.a.a Oncorhynchus_a ANCESTRAL SPECIES 2 ENSGT00940000166318.b ENSGT01090000260082.d.a.a.d.c ENSGT00940000159316.xb.b ENSGT00940000162717.a ENSGT00530000063529.B.b ENSGT00940000160622.`b.b ENSGT00940000159803.m ENSGT00940000157297.n.a ENSGT01030000234566.e.b.b.b.b ENSGT01000000217261.a ENSGT01050000244888.b.a.c.a.a ENSGT00530000063666.a.fb #11 ENSGT00940000164237.h ENSGT00390000011425.A.c #19 ENSGT00940000156017.eb.a.a #20 ENSGT00950000183107.a.b.b.q.b #22 ENSGT00940000162488.b.a.a #24 ENSGT00950000182832.D.b.fc #25 ENSGT00940000161737 ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a.a ENSGT00940000155902.d.c.a ENSGT00940000159183.v.a ENSGT00570000080851 ENSGT00390000003107.b.i.b ENSGT01080000257562.b ENSGT00940000166868.a.e ENSGT00940000164695.b.e ENSGT00940000160599.s ENSGT00940000159399.c.a.a ENSGT00940000156028.t.f Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 23 ENSOTSG00005012662 ENSOTSG00005012660 fdx1b (ENSOTSG00005012659) msna (ENSOTSG00005010803) ZC3H12B (ENSOTSG00005010795) mtmr8 (ENSOTSG00005010760) amer1 (ENSOTSG00005010752) ENSOTSG00005010656 ENSOTSG00005010654 smarca1 (ENSOTSG00005010526) TENM1 (ENSOTSG00005009078) apool (ENSOTSG00005009076) #11 ENSOTSG00005009047 ENSOTSG00005009046 #19 sh3bgrl (ENSOTSG00005047699) #20 BRWD3 (ENSOTSG00005047698) #22 TENT5D (ENSOTSG00005047694) #24 chmp1b (ENSOTSG00005047693) #25 nup62l (ENSOTSG00005047691) CNGA2 (ENSOTSG00005047688) PLS3 (ENSOTSG00005047468) sec61b (ENSOTSG00005047458) ENSOTSG00005047457 ATRX (ENSOTSG00005047455) ENSOTSG00005047454 ENSOTSG00005047453 ENSOTSG00005047452 ENSOTSG00005047451 QPCTL (ENSOTSG00005047449) ENSOTSG00005047448 ENSOTSG00005047447 Chinook salmon MODERN SPECIES 29 ENSOTSG00005039487 fdx1b (ENSOTSG00005039484) msna (ENSOTSG00005036412) ZC3H12B (ENSOTSG00005036404) amer1 (ENSOTSG00005036403) mtmr8 (ENSOTSG00005035677) ENSOTSG00005035661 smarca1 (ENSOTSG00005035550) TENM1 (ENSOTSG00005035119) ENSOTSG00005035101 agtr2 (ENSOTSG00005035099) apool (ENSOTSG00005035098) #11 ENSOTSG00005034906 ENSOTSG00005034905 #19 SH3BGRL (ENSOTSG00005034904) #20 BRWD3 (ENSOTSG00005034291) #22 TENT5D (ENSOTSG00005034229) #24 chmp1b (ENSOTSG00005034220) #25 nup62l (ENSOTSG00005034216) CNGA2 (ENSOTSG00005034214) pls3 (ENSOTSG00005028264) ATRX (ENSOTSG00005026108) ENSOTSG00005026100 ENSOTSG00005026099 ENSOTSG00005026098 ENSOTSG00005026097 ENSOTSG00005026096 ENSOTSG00005026095 ppm1nb (ENSOTSG00005026094) rtn2b (ENSOTSG00005026093) RAB4B (ENSOTSG00005026092) Coho salmon MODERN SPECIES 20 ENSOKIG00005049857 fdx1b (ENSOKIG00005049865) ZC3H12B (ENSOKIG00005049869) mtmr8 (ENSOKIG00005024659) amer1 (ENSOKIG00005025000) ENSOKIG00005025069 ENSOKIG00005025305 smarca1 (ENSOKIG00005025406) TENM1 (ENSOKIG00005026059) ENSOKIG00005026960 agtr2 (ENSOKIG00005026971) apool (ENSOKIG00005026984) #11 ENSOKIG00005027024 ENSOKIG00005027264 #19 SH3BGRL (ENSOKIG00005027278) #20 BRWD3 (ENSOKIG00005027453) #22 TENT5D (ENSOKIG00005028714) #24 chmp1b (ENSOKIG00005028736) #25 ENSOKIG00005028840 CNGA2 (ENSOKIG00005028859) pls3 (ENSOKIG00005028923) ATRX (ENSOKIG00005029656) ENSOKIG00005030543 ENSOKIG00005030562 ENSOKIG00005030581 ENSOKIG00005030592 ENSOKIG00005030616 QPCTL (ENSOKIG00005030642) ENSOKIG00005030678 ppm1nb (ENSOKIG00005030691) rtn2b (ENSOKIG00005030707) Salmo ANCESTRAL SPECIES 17 ENSGT01090000260082.d.a.a.d.c ENSGT00990000212008 ENSGT00940000159316.xb.b ENSGT00940000162717.a ENSGT00940000153902.b.a.a ENSGT00530000063529.B.b ENSGT00940000160622.`b.b ENSGT00940000159803.m ENSGT00940000157297.n.a ENSGT01030000234566.e.b.b.b.b ENSGT01050000244888.b.a.c.a.a ENSGT00530000063666.a.fb #11 ENSGT00940000164237.h ENSGT00390000011425.A.c #19 ENSGT00940000156017.eb.a.a #20 ENSGT00950000183107.a.b.b.q.b #22 ENSGT00940000162488.b.a.a #24 ENSGT00950000182832.D.b.fc #25 ENSGT00940000167119 ENSGT00940000155374.g.a ENSGT00950000183097.a.a.a.f.a.a.a ENSGT00940000155902.d.c.a ENSGT00990000203619.B.a.b.a ENSGT00940000154133.B.e ENSGT00940000160033.d.c ENSGT00940000159183.v.a ENSGT00570000080851 ENSGT00390000003107.b.i.b ENSGT01080000257562.b ENSGT00940000166868.a.e ENSGT00940000164695.b.e River trout MODERN SPECIES 10 ENSSTUG00000036223 msna (ENSSTUG00000035688) ZC3H12B (ENSSTUG00000035649) mtmr8 (ENSSTUG00000035627) asb12a (ENSSTUG00000035616) amer1 (ENSSTUG00000035608) ENSSTUG00000034069 ENSSTUG00000034001 smarca1 (ENSSTUG00000033406) TENM1 (ENSSTUG00000032523) agtr2 (ENSSTUG00000032460) apool (ENSSTUG00000032420) #11 ENSSTUG00000032150 ENSSTUG00000032128 #19 sh3bgrl (ENSSTUG00000032098) #20 BRWD3 (ENSSTUG00000029632) #22 TENT5D (ENSSTUG00000029575) #24 chmp1b (ENSSTUG00000029498) #25 ENSSTUG00000029472 CNGA2 (ENSSTUG00000029087) pls3 (ENSSTUG00000025373) ENSSTUG00000025266 ATRX (ENSSTUG00000023778) ENSSTUG00000023738 ccdc61 (ENSSTUG00000023723) ENSSTUG00000023713 ENSSTUG00000023708 QPCTL (ENSSTUG00000023694) ENSSTUG00000023689 ENSSTUG00000023650 ppm1nb (ENSSTUG00000023615) Huchen MODERN SPECIES 104 msna (ENSHHUG00000015857) ZC3H12B (ENSHHUG00000017594) mtmr8 (ENSHHUG00000017600) asb12a (ENSHHUG00000017663) amer1 (ENSHHUG00000017678) ENSHHUG00000017683 ENSHHUG00000017768 smarca1 (ENSHHUG00000017787) TENM1 (ENSHHUG00000017982) ENSHHUG00000018879 agtr2 (ENSHHUG00000018882) apool (ENSHHUG00000018887) #11 ENSHHUG00000018894 ENSHHUG00000018917 #19 sh3bgrl (ENSHHUG00000018931) #20 ENSHHUG00000018982 #22 TENT5D (ENSHHUG00000019177) #24 chmp1b (ENSHHUG00000019183) #25 rraga (ENSHHUG00000019315) ENSHHUG00000019337 CNGA2 (ENSHHUG00000019376) pls3 (ENSHHUG00000019584) ENSHHUG00000020617 CYSLTR2 (ENSHHUG00000020696) ##29 ccdc61 (ENSHHUG00000020700) ENSHHUG00000020713 ENSHHUG00000020721 ENSHHUG00000020732 QPCTL (ENSHHUG00000020754) ENSHHUG00000020800 ENSHHUG00000020808 Salmoninae ANCESTRAL SPECIES ENSGT00950000183107.a.b.b.r #22 Huchen MODERN SPECIES 4106 ENSHHUG00000016390 ##22 ENSHHUG00000016383 #22 ENSHHUG00000016380 ENSHHUG00000016371 Otomorpha ANCESTRAL SPECIES 751 ENSGT00950000183107.a.b.b #22 ENSGT00940000155374.g.a Clupeiformes ANCESTRAL SPECIES 300 ENSGT00950000183107.a.b.b #22 ENSGT00940000155374.g.a ENSGT00940000155902.d ENSGT00940000158214.d ENSGT01020000230412.D.a.a.b ENSGT00940000161362 ENSGT00730000111220 ENSGT00940000165703 ENSGT00390000002414 ENSGT00990000205544 ENSGT00940000155242 ENSGT00940000163331.a.a ENSGT00940000155128.a.a.b ENSGT00390000006915.c.d.b ENSGT00940000167278 ENSGT00940000156123.b.a Atlantic herring MODERN SPECIES 24 camlg (ENSCHAG00000023398) ZC3H12B (ENSCHAG00000023376) zc4h2 (ENSCHAG00000023355) shisa2a (ENSCHAG00000023350) mtmr8 (ENSCHAG00000023277) asb12a (ENSCHAG00000023243) amer1 (ENSCHAG00000023237) ENSCHAG00000022682 ENSCHAG00000022655 smarca1 (ENSCHAG00000021368) TENM1 (ENSCHAG00000020629) agtr2 (ENSCHAG00000020604) ENSCHAG00000020598 ENSCHAG00000020382 apool (ENSCHAG00000020365) #11 BRWD3 (ENSCHAG00000019126) #22 chmp1b (ENSCHAG00000018937) #25 CNGA2 (ENSCHAG00000018572) zdhhc15a (ENSCHAG00000018387) uprt (ENSCHAG00000018322) nalf2 (ENSCHAG00000018314) ENSCHAG00000018298 eda (ENSCHAG00000018290) wnt11f2 (ENSCHAG00000018281) igbp1 (ENSCHAG00000018271) zgc:158432 (ENSCHAG00000018262) taf1 (ENSCHAG00000013156) rhogc (ENSCHAG00000013005) ENSCHAG00000012993 plp1b (ENSCHAG00000012955) nlgn3b (ENSCHAG00000012918) Denticle herring MODERN SPECIES 16 ZC3H12B (ENSDCDG00000032570) zc4h2 (ENSDCDG00000032573) shisa2a (ENSDCDG00000032575) mtmr8 (ENSDCDG00000032582) asb12a (ENSDCDG00000032601) amer1 (ENSDCDG00000032602) ENSDCDG00000032603 ENSDCDG00000032618 smarca1 (ENSDCDG00000032651) TENM1 (ENSDCDG00000033349) sh2d1aa (ENSDCDG00000034442) agtr2 (ENSDCDG00000034444) apool (ENSDCDG00000034445) #11 ENSDCDG00000034449 ENSDCDG00000034455 BRWD3 (ENSDCDG00000034472) #22 chmp1b (ENSDCDG00000034548) #25 CNGA2 (ENSDCDG00000034552) ENSDCDG00000034554 zdhhc15a (ENSDCDG00000034568) uprt (ENSDCDG00000034585) nalf2 (ENSDCDG00000034587) eda (ENSDCDG00000034589) wnt11f2 (ENSDCDG00000034597) igbp1 (ENSDCDG00000034610) taf1 (ENSDCDG00000034641) rhogc (ENSDCDG00000034740) ENSDCDG00000034742 ENSDCDG00000034744 plp1b (ENSDCDG00000034748) nlgn3b (ENSDCDG00000034752) Otophysi ANCESTRAL SPECIES 93 ENSGT00940000155478.hb.b ENSGT00510000048626 ENSGT00940000155573.g.b ENSGT00950000183079.A.b.c.b ENSGT00980000198690 ENSGT00940000161656 ENSGT00940000166502 ENSGT00940000156455 ENSGT01070000253816.a.b ENSGT00940000154442 ENSGT00660000097471 ENSGT00940000164304 ENSGT00390000005094.g ENSGT00770000121762 ENSGT00980000199388 ENSGT00950000183107.a.b.b #22 ENSGT00950000182832.D.b #25 ENSGT00940000155374.g.a ENSGT00940000156506.a ENSGT00730000111354 ENSGT00940000158958 Cyprinoidei ANCESTRAL SPECIES 16 ENSGT00940000161656 ENSGT00940000166502 ENSGT00940000156455 ENSGT01070000253816.a.b ENSGT00940000160994.h ENSGT00940000154442 ENSGT00660000097471 ENSGT00940000160515 ENSGT00390000017980 ENSGT00940000164304 ENSGT00390000005094.g ENSGT00530000063666.a #11 ENSGT00940000164237 ENSGT00770000121762 ENSGT00980000199388 ENSGT00950000183107.a.b.b #22 ENSGT00950000182832.D.b #25 ENSGT00940000155374.g.a ENSGT00940000155902.d ENSGT00940000158214.d ENSGT01020000230412.D.a.a.b ENSGT00940000156506.a.a ENSGT00940000153110.D ENSGT00730000111354 ENSGT00940000158958 ENSGT01050000244888.b.a.c.a ENSGT00390000006915.c.d.b ENSGT00940000167278 ENSGT00940000156123.b.a ENSGT00940000153251.b.a ENSGT00950000182972.a.a.a.a.a.f Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 31 ENSGT00980000198660.a.a ENSGT00940000164220.b.b.d ENSGT00980000198690.d ENSGT00940000161656 ENSGT00940000166502.b ENSGT00940000156455.a ENSGT01070000253816.a.b ENSGT00940000154442.id ENSGT00660000097471.b ENSGT00940000160515.d ENSGT00390000017980.o ENSGT00940000164304.f ENSGT00390000005094.g.m.b ENSGT00530000063666.a.y #11 ENSGT00940000164237.l ENSGT00950000183107.a.b.b.s #22 ENSGT00950000182832.D.b.nc #25 ENSGT00940000155374.g.a.f ENSGT00940000155902.d.a ENSGT00940000158214.d.b ENSGT01020000230412.D.a.a.b.b ENSGT00940000159746.j.a ENSGT00940000156506.a.a.b ENSGT00940000153110.D ENSGT00730000111354.d ENSGT00940000158958.d ENSGT01050000244888.b.a.c.a.g ENSGT00390000006915.c.d.b.a ENSGT00940000167278.g ENSGT00940000156123.b.a.b ENSGT00940000169200 Goldfish MODERN SPECIES 3271 msna (ENSCARG00000061880) ENSCARG00000061817 ENSCARG00000061812 GPR83 (ENSCARG00000061794) ENSCARG00000061786 RPL36AL (ENSCARG00000061757) glra4b (ENSCARG00000061748) aifm1 (ENSCARG00000070066) tnfsf10l4 (ENSCARG00000070042) nono (ENSCARG00000070037) mtnr1c (ENSCARG00000070026) vma21 (ENSCARG00000070022) npas2 (ENSCARG00000070014) apool (ENSCARG00000070006) #11 ENSCARG00000070003 BRWD3 (ENSCARG00000069886) #22 chmp1b (ENSCARG00000069838) #25 CNGA2 (ENSCARG00000069819) zdhhc15a (ENSCARG00000069804) uprt (ENSCARG00000069801) NEXMIF (ENSCARG00000069798) prps1a (ENSCARG00000069788) tbx5b (ENSCARG00000069785) ENSCARG00000069782 ENSCARG00000069780 TPCN1 (ENSCARG00000069772) agtr2 (ENSCARG00000069768) plp1b (ENSCARG00000069765) nlgn3b (ENSCARG00000069762) gria3a (ENSCARG00000069714) stag2a (ENSCARG00000069525) Cyprininae_a ANCESTRAL SPECIES ENSGT00980000198660.a.a.b ENSGT00940000164220.b.b.d ENSGT00980000198690.d ENSGT00940000161656 ENSGT00940000166502.b ENSGT00940000156455.a ENSGT01070000253816.a.b ENSGT00940000154442.id ENSGT00660000097471.b ENSGT00940000160515.d ENSGT00390000017980.o ENSGT00940000164304.f ENSGT00390000005094.g.m.b ENSGT00530000063666.a.y #11 ENSGT00940000164237.l ENSGT00950000183107.a.b.b.s #22 ENSGT00950000182832.D.b.nc #25 ENSGT00940000155374.g.a.f ENSGT00940000155902.d.a.a ENSGT00940000158214.d.b ENSGT01020000230412.D.a.a.b.b ENSGT00940000159746.j.a ENSGT00940000156506.a.a.b ENSGT00940000153110.D ENSGT00730000111354.d ENSGT00940000158958.d ENSGT01050000244888.b.a.c.a.g ENSGT00390000006915.c.d.b.a ENSGT00940000167278.g ENSGT00940000156123.b.a.b ENSGT00940000169200 Common carp reference MODERN SPECIES 7 ENSCCRG00000059509 ENSCCRG00000052994 rpl36a (ENSCCRG00000051128) glra4b (ENSCCRG00000051127) aifm1 (ENSCCRG00000019418) tnfsf10l4 (ENSCCRG00000019383) nono (ENSCCRG00000070158) mtnr1c (ENSCCRG00000063256) vma21 (ENSCCRG00000048634) npas2 (ENSCCRG00000026695) ENSCCRG00000057416 apool (ENSCCRG00000026701) #11 ENSCCRG00000077866 ENSCCRG00000026711 ENSCCRG00000081116 ENSCCRG00000026847 #22 chmp1b (ENSCCRG00000078600) #25 ENSCCRG00000031177 ENSCCRG00000082102 zdhhc15a (ENSCCRG00000027419) uprt (ENSCCRG00000027414) NEXMIF (ENSCCRG00000055372) ENSCCRG00000056488 tbx5b (ENSCCRG00000027406) CFAP73 (ENSCCRG00000027402) IQCD (ENSCCRG00000027398) TPCN1 (ENSCCRG00000026682) agtr2 (ENSCCRG00000055075) plp1b (ENSCCRG00000051482) nlgn3b (ENSCCRG00000080152) gria3a (ENSCCRG00000037188) Golden-line barbel MODERN SPECIES 999 ENSSGRG00000036173 ENSSGRG00000036174 ENSSGRG00000036178 rpl36a (ENSSGRG00000036181) glra4b (ENSSGRG00000036183) aifm1 (ENSSGRG00000036219) tnfsf10l4 (ENSSGRG00000037630) nono (ENSSGRG00000037632) zgc:113208 (ENSSGRG00000037635) mtnr1c (ENSSGRG00000037636) vma21 (ENSSGRG00000037637) npas2 (ENSSGRG00000037644) apool (ENSSGRG00000037683) #11 ENSSGRG00000037684 ENSSGRG00000037686 BRWD3 (ENSSGRG00000037690) #22 chmp1b (ENSSGRG00000037706) #25 Cyprininae ANCESTRAL SPECIES 50 ENSGT00940000154336.cd ENSGT00940000162079.m ENSGT00940000164220.b.b.c.b ENSGT00980000198690.c ENSGT00940000166502.a ENSGT00940000156455.b ENSGT00940000160994.h ENSGT00940000154442.hd ENSGT00660000097471.a ENSGT00940000160515.c ENSGT00390000017980.p ENSGT00940000164304.e ENSGT00390000005094.g.m.a ENSGT00530000063666.a.z #11 ENSGT00940000164237.k ENSGT00950000183107.a.b.b.t #22 ENSGT00950000182832.D.b.oc #25 ENSGT00940000155374.g.a.e ENSGT00940000155902.d.b ENSGT00940000158214.d.a ENSGT01020000230412.D.a.a.b.a ENSGT00940000159746.j.b ENSGT00940000156506.a.a.a ENSGT00730000111354.c ENSGT00940000158958.c ENSGT01050000244888.b.a.c.a.h ENSGT00390000006915.c.d.b.b ENSGT00940000167278.h ENSGT00940000156123.b.a.a ENSGT00940000153251.b.a ENSGT00950000182972.a.a.a.a.a.f.g Goldfish MODERN SPECIES 23 ENSCARG00000062350 ENSCARG00000062320 rpl36a (ENSCARG00000062271) glra4b (ENSCARG00000062179) aifm1 (ENSCARG00000058306) casp22 (ENSCARG00000058214) nono (ENSCARG00000058178) zgc:113208 (ENSCARG00000058165) MEL1c (ENSCARG00000058151) vma21 (ENSCARG00000058119) npas2 (ENSCARG00000058081) ENSCARG00000058056 apool (ENSCARG00000058031) #11 ENSCARG00000058002 ENSCARG00000057977 BRWD3 (ENSCARG00000051277) #22 chmp1b (ENSCARG00000050810) #25 CNGA2 (ENSCARG00000050769) ENSCARG00000050752 zdhhc15a (ENSCARG00000050733) uprt (ENSCARG00000050680) NEXMIF (ENSCARG00000050647) tbx5b (ENSCARG00000050208) ENSCARG00000050157 TPCN1 (ENSCARG00000049377) agtr2 (ENSCARG00000049332) plp1b (ENSCARG00000049225) nlgn3b (ENSCARG00000049144) gria3a (ENSCARG00000048180) stag2a (ENSCARG00000047490) acsl4b (ENSCARG00000047318) Cyprininae_a ANCESTRAL SPECIES 42 ENSGT00940000154336.cd ENSGT00940000162079.m ENSGT00940000164220.b.b.c.b ENSGT00980000198690.c ENSGT00940000166502.a ENSGT00940000156455.b ENSGT00940000160994.h ENSGT00940000154442.hd ENSGT00660000097471.a ENSGT00940000160515.c ENSGT00390000017980.p ENSGT00940000164304.e ENSGT00390000005094.g.m.a ENSGT00530000063666.a.z #11 ENSGT00940000164237.k ENSGT00950000183107.a.b.b.t #22 ENSGT00950000182832.D.b.oc #25 ENSGT00940000155374.g.a.e ENSGT00940000155902.d.b ENSGT00940000158214.d.a ENSGT01020000230412.D.a.a.b.a ENSGT00940000159746.j.b ENSGT00950000182803.B.d.a.n ENSGT00940000156506.a.a.a ENSGT00730000111354.c ENSGT00940000158958.c ENSGT01050000244888.b.a.c.a.h ENSGT00390000006915.c.d.b.b ENSGT00940000167278.h ENSGT00940000156123.b.a.a ENSGT00940000153251.b.a Common carp reference MODERN SPECIES 15 ENSCCRG00000056125 ENSCCRG00000069253 ENSCCRG00000057065 ENSCCRG00000072055 glra4b (ENSCCRG00000008120) aifm1 (ENSCCRG00000005144) ENSCCRG00000000117 nono (ENSCCRG00000019374) zgc:113208 (ENSCCRG00000027192) mtnr1c (ENSCCRG00000027189) vma21 (ENSCCRG00000055531) npas2 (ENSCCRG00000026033) ENSCCRG00000026054 apool (ENSCCRG00000026064) #11 ENSCCRG00000026076 ENSCCRG00000082116 #22 chmp1b (ENSCCRG00000031170) #25 ENSCCRG00000081691 ENSCCRG00000058494 zdhhc15a (ENSCCRG00000061709) uprt (ENSCCRG00000072923) NEXMIF (ENSCCRG00000063365) ENSCCRG00000066923 tbx5b (ENSCCRG00000053260) ENSCCRG00000008764 ENSCCRG00000008365 agtr2 (ENSCCRG00000071870) plp1b (ENSCCRG00000008315) gria3a (ENSCCRG00000035742) ENSCCRG00000035665 stag2a (ENSCCRG00000035644) Golden-line barbel MODERN SPECIES 229 fdx1b (ENSSGRG00000022938) GPR83 (ENSSGRG00000022935) ENSSGRG00000022934 ENSSGRG00000022927 ENSSGRG00000022926 glra4b (ENSSGRG00000022903) aifm1 (ENSSGRG00000021572) casp22 (ENSSGRG00000021542) nono (ENSSGRG00000021541) zgc:113208 (ENSSGRG00000021540) ENSSGRG00000021539 vma21 (ENSSGRG00000021538) npas2 (ENSSGRG00000021536) ENSSGRG00000021535 ENSSGRG00000021292 BRWD3 (ENSSGRG00000019125) #22 CNGA2 (ENSSGRG00000019081) ENSSGRG00000019078 zdhhc15a (ENSSGRG00000019075) ENSSGRG00000019074 NEXMIF (ENSSGRG00000019073) ENSSGRG00000019072 ENSSGRG00000019071 tbx5b (ENSSGRG00000019069) ENSSGRG00000019068 TPCN1 (ENSSGRG00000019067) agtr2 (ENSSGRG00000019066) plp1b (ENSSGRG00000019042) nlgn3b (ENSSGRG00000019040) gria3a (ENSSGRG00000018122) stag2a (ENSSGRG00000015325) Zebrafish MODERN SPECIES 20 rpl36a (ENSDARG00000058105) glra4b (ENSDARG00000058103) aifm1 (ENSDARG00000058088) tnfsf10l4 (ENSDARG00000058068) casp22 (ENSDARG00000091926) nono (ENSDARG00000020482) zgc:113208 (ENSDARG00000035610) mtnr1c (ENSDARG00000035609) vma21 (ENSDARG00000093945) npas2 (ENSDARG00000016536) ENSDARG00000010331 apool (ENSDARG00000039374) #11 ENSDARG00000075491 ENSDARG00000094025 hmgn7 (ENSDARG00000062326) BRWD3 (ENSDARG00000035540) #22 chmp1b (ENSDARG00000099624) #25 CNGA2 (ENSDARG00000100436) ENSDARG00000099449 zdhhc15a (ENSDARG00000101039) uprt (ENSDARG00000035549) NEXMIF (ENSDARG00000089271) prps1a (ENSDARG00000015524) tbx5b (ENSDARG00000092060) ENSDARG00000095150 CFAP73 (ENSDARG00000035550) IQCD (ENSDARG00000035551) TPCN1 (ENSDARG00000062362) agtr2 (ENSDARG00000035552) ENSDARG00000094760 plp1b (ENSDARG00000011929) Characiphysae ANCESTRAL SPECIES 87 ENSGT00950000183079.A.b.c.b ENSGT00980000198690 ENSGT00940000161656 ENSGT00940000166502 ENSGT00940000156455 ENSGT01070000253816.a.b ENSGT00940000154442 ENSGT00660000097471 ENSGT00940000160515 ENSGT00390000017980 ENSGT00940000164304 ENSGT00390000005094.g ENSGT00940000164237.m ENSGT00770000121762 ENSGT00980000199388 ENSGT00950000183107.a.b.b #22 ENSGT00950000182832.D.b #25 ENSGT00940000155374.g.a ENSGT00940000155902.d ENSGT00940000158214.d ENSGT01020000230412.D.a.a.b.d ENSGT00940000156506.a ENSGT00940000153110.D ENSGT00730000111354 ENSGT00940000158958 Characiphysae_b ANCESTRAL SPECIES 101 ENSGT00940000155573.g.b ENSGT00950000183079.A.b.c.b ENSGT00940000161656 ENSGT00940000166502 ENSGT00940000156455 ENSGT01070000253816.a.b ENSGT00940000154442 ENSGT00660000097471 ENSGT00940000160515 ENSGT00390000017980 ENSGT00940000164304 ENSGT00390000005094.g ENSGT00940000164237.m ENSGT00770000121762 ENSGT00980000199388 ENSGT00950000183107.a.b.b #22 ENSGT00940000155374.g.a ENSGT00940000155902.d ENSGT00940000158214.d ENSGT01020000230412.D.a.a.b.d ENSGT00940000156506.a ENSGT00940000153110.D ENSGT00730000111354 ENSGT00940000158958 Electric eel MODERN SPECIES 1270 ENSEEEG00000005746 ENSEEEG00000005743 #22 Characoidei ANCESTRAL SPECIES 92 ENSGT00950000183079.A.b.c.b ENSGT00940000161656 ENSGT00940000166502 ENSGT00940000156455 ENSGT01070000253816.a.b ENSGT00940000154442 ENSGT00660000097471 ENSGT00940000160515 ENSGT00390000017980 ENSGT00940000164304 ENSGT00390000005094.g ENSGT00940000164237.m ENSGT00770000121762 ENSGT00980000199388 ENSGT00950000182802.D.db.b ENSGT00950000183107.a.b.b #22 ENSGT00940000155374.g.a ENSGT00940000155902.d ENSGT00940000158214.d ENSGT01020000230412.D.a.a.b.d ENSGT00940000156506.a ENSGT00940000153110.D ENSGT00730000111354 ENSGT00940000158958 ENSGT00950000183116.b.a.a.b.b.i.a.a.b Mexicana tetra MODERN SPECIES 18 ENSAMXG00000006861 ENSAMXG00000030085 zgc:113208 (ENSAMXG00000042293) mtnr1c (ENSAMXG00000034668) vma21 (ENSAMXG00000006901) npas2 (ENSAMXG00000006915) ENSAMXG00000006937 ENSAMXG00000006950 ENSAMXG00000034232 ENSAMXG00000039013 apool (ENSAMXG00000029037) #11 ENSAMXG00000037259 ENSAMXG00000031834 ENSAMXG00000030848 hmgn7 (ENSAMXG00000007022) BRWD3 (ENSAMXG00000007033) #22 chmp1b (ENSAMXG00000007042) #25 CNGA2 (ENSAMXG00000007050) ENSAMXG00000007066 zdhhc15a (ENSAMXG00000035547) uprt (ENSAMXG00000037352) NEXMIF (ENSAMXG00000007091) ENSAMXG00000038905 prps1a (ENSAMXG00000032486) tbx5b (ENSAMXG00000038165) CFAP73 (ENSAMXG00000043844) IQCD (ENSAMXG00000036602) TPCN1 (ENSAMXG00000007110) ENSAMXG00000032649 ENSAMXG00000007123 ENSAMXG00000041818 Red-bellied piranha MODERN SPECIES 443 ENSPNAG00000008331 rpl36a (ENSPNAG00000008320) glra4b (ENSPNAG00000000879) aifm1 (ENSPNAG00000008292) tnfsf10l4 (ENSPNAG00000000804) nono (ENSPNAG00000008232) zgc:113208 (ENSPNAG00000008219) mtnr1c (ENSPNAG00000008208) vma21 (ENSPNAG00000000774) npas2 (ENSPNAG00000000764) ENSPNAG00000000744 apool (ENSPNAG00000008161) #11 ENSPNAG00000008148 ENSPNAG00000008124 ENSPNAG00000000689 ENSPNAG00000000684 #22 ENSPNAG00000000678 ##22 Elephant shark MODERN SPECIES 1487 dacha (ENSCMIG00000005996) chm (ENSCMIG00000006000) ENSCMIG00000006015 #7 znf711 (ENSCMIG00000006021) #8 ENSCMIG00000006025 ENSCMIG00000006030 #11 ENSCMIG00000006064 HDX (ENSCMIG00000006110) #15 rps6kal (ENSCMIG00000006380) #16 POU3F4 (ENSCMIG00000007197) #18 ENSCMIG00000007200 ENSCMIG00000007202 ENSCMIG00000007209 ENSCMIG00000007214 #19 sh3bgrl (ENSCMIG00000007216) #20 BRWD3 (ENSCMIG00000007328) #22 TENT5D (ENSCMIG00000007675) #24 chmp1b (ENSCMIG00000007679) #25 TBX22 (ENSCMIG00000007692) #26 ENSCMIG00000007712 ITM2A (ENSCMIG00000007722) #27 ENSCMIG00000007731 ##29 p2ry10 (ENSCMIG00000007736) #29 LPAR4 (ENSCMIG00000007740) #31 ENSCMIG00000007742 #33 cysltr1 (ENSCMIG00000007744) #34 ENSCMIG00000007792 #35 taf9 (ENSCMIG00000007874) sucla2 (ENSCMIG00000007908) htr2cl1 (ENSCMIG00000008016) ENSCMIG00000008021 Gnathostomata ANCESTRAL SPECIES 337 ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00940000154465.A Euteleostomi ANCESTRAL SPECIES 37 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000164201 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00940000177223 ENSGT00550000074968 Actinopterygii ANCESTRAL SPECIES 5 ENSGT00940000154907.a.a ENSGT00940000167100 ENSGT01030000234626.E ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000165615 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000160816 ENSGT00390000000083.b ENSGT00390000006659 Reedfish MODERN SPECIES 12 MMP1 (ENSECRG00000006660) MMP1 (ENSECRG00000006675) mmp30 (ENSECRG00000006685) acat1 (ENSECRG00000006706) ENSECRG00000006723 ATM (ENSECRG00000006745) TMPRSS2 (ENSECRG00000006779) FAM3B (ENSECRG00000007065) bace2 (ENSECRG00000007072) DSCAM (ENSECRG00000007139) pcp4a (ENSECRG00000007251) ENSECRG00000007261 sh3bgr (ENSECRG00000007282) get1 (ENSECRG00000007303) ENSECRG00000007315 BRWD1 (ENSECRG00000007330) ##22 psmg1 (ENSECRG00000007374) ETS2 (ENSECRG00000007384) erg (ENSECRG00000007416) KCNJ15 (ENSECRG00000007456) KCNJ6 (ENSECRG00000007465) dyrk1ab (ENSECRG00000007487) vps26c (ENSECRG00000007541) ENSECRG00000007576 pigp (ENSECRG00000007599) ENSECRG00000007608 HLCS (ENSECRG00000007622) SIM2 (ENSECRG00000007634) ENSECRG00000007654 riox2 (ENSECRG00000007683) tiprl (ENSECRG00000007709) Neopterygii ANCESTRAL SPECIES 57 ENSGT00940000156340.b ENSGT00940000160903 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b ENSGT00940000164201.d ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000165615 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00980000203400 ENSGT00390000016695 ENSGT00940000159187 ENSGT00940000160956 ENSGT00950000183079.A.b.c.b ENSGT00940000153716.A ENSGT00940000163831 ENSGT01030000234646.B.a.b ENSGT00940000156040 ENSGT00550000074891 ENSGT00940000160633 ENSGT00390000004601 ENSGT00390000007133 Spotted gar MODERN SPECIES 669 ENSLOCG00000001242 MMP7 (ENSLOCG00000001263) ENSLOCG00000001296 ENSLOCG00000001312 ATM (ENSLOCG00000001332) tmprss2 (ENSLOCG00000001392) ENSLOCG00000001408 FAM3B (ENSLOCG00000001440) bace2 (ENSLOCG00000001455) DSCAM (ENSLOCG00000001471) pcp4a (ENSLOCG00000001548) ENSLOCG00000001556 SH3BGR (ENSLOCG00000001571) ENSLOCG00000001582 GET1 (ENSLOCG00000001591) BRWD1 (ENSLOCG00000001608) ##22 MIPEP (ENSLOCG00000001633) TNFRSF19 (ENSLOCG00000001649) SACS (ENSLOCG00000001682) sgcg (ENSLOCG00000001705) FGF9 (ENSLOCG00000001730) micu2 (ENSLOCG00000001747) zdhhc20a (ENSLOCG00000001760) slc51a (ENSLOCG00000001773) pdk3b (ENSLOCG00000001784) pcyt1bb (ENSLOCG00000001818) pola1 (ENSLOCG00000001836) arxa (ENSLOCG00000001912) hgd (ENSLOCG00000001925) SPAG16 (ENSLOCG00000017443) ccdc82 (ENSLOCG00000001946) Osteoglossocephalai ANCESTRAL SPECIES 73 ENSGT00940000166189 ENSGT00940000156340.b ENSGT00940000160903 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.a ENSGT00940000165905 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00980000203400 ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00990000205362 ENSGT00390000013374 ENSGT00390000010608 ENSGT00940000157165 ENSGT00950000182942.b.f ENSGT00940000158035 Osteoglossiformes ANCESTRAL SPECIES 113 ENSGT00940000160984 ENSGT00730000110920.a.g ENSGT00940000166189 ENSGT00940000156340.b.b ENSGT00940000160903 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.a.a ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT01030000235087 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086.k ENSGT00730000111174 ENSGT00990000205362 ENSGT00390000013374 ENSGT00390000010608 ENSGT00940000157165.c ENSGT00950000182942.b.f.d ENSGT00950000182942.b.f.c ENSGT00940000158035 P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 139 ENSPKIG00000012933 ENSPKIG00000012852 ENSPKIG00000012694 ENSPKIG00000012627 ATM (ENSPKIG00000012515) tmprss2 (ENSPKIG00000012462) bace2 (ENSPKIG00000012437) DSCAM (ENSPKIG00000012341) ENSPKIG00000012281 ENSPKIG00000012261 sh3bgr (ENSPKIG00000012144) im:7159173 (ENSPKIG00000012062) ENSPKIG00000012051 ##22 ENSPKIG00000011988 ##22 MIPEP (ENSPKIG00000011944) tnfrsf19 (ENSPKIG00000011900) SACS (ENSPKIG00000011853) sgcg (ENSPKIG00000011825) rps25 (ENSPKIG00000011802) trappc4 (ENSPKIG00000011789) slc37a4a (ENSPKIG00000011747) ccdc61 (ENSPKIG00000011692) itpkcb (ENSPKIG00000011642) zgc:153119 (ENSPKIG00000011611) snrpa (ENSPKIG00000011587) ENSPKIG00000011566 ENSPKIG00000011545 ENSPKIG00000011534 ENSPKIG00000011432 P. kingsleyae MODERN SPECIES 139 ENSPKIG00000012933 ENSPKIG00000012852 ENSPKIG00000012694 ENSPKIG00000012627 ATM (ENSPKIG00000012515) tmprss2 (ENSPKIG00000012462) bace2 (ENSPKIG00000012437) DSCAM (ENSPKIG00000012341) ENSPKIG00000012281 ENSPKIG00000012261 sh3bgr (ENSPKIG00000012144) im:7159173 (ENSPKIG00000012062) ENSPKIG00000012051 ##22 ENSPKIG00000011988 ##22 MIPEP (ENSPKIG00000011944) tnfrsf19 (ENSPKIG00000011900) SACS (ENSPKIG00000011853) sgcg (ENSPKIG00000011825) rps25 (ENSPKIG00000011802) trappc4 (ENSPKIG00000011789) slc37a4a (ENSPKIG00000011747) ccdc61 (ENSPKIG00000011692) itpkcb (ENSPKIG00000011642) zgc:153119 (ENSPKIG00000011611) snrpa (ENSPKIG00000011587) ENSPKIG00000011566 ENSPKIG00000011545 ENSPKIG00000011534 Asian bonytongue MODERN SPECIES 1 ACER3 (ENSSFOG00015011123) ENSSFOG00015011081 ENSSFOG00015011022 ENSSFOG00015031605 ENSSFOG00015010643 ENSSFOG00015010563 ATM (ENSSFOG00015010186) tmprss2 (ENSSFOG00015010164) bace2 (ENSSFOG00015032132) DSCAM (ENSSFOG00015010046) PCP4 (ENSSFOG00015010026) ENSSFOG00015009903 ENSSFOG00015009788 get1 (ENSSFOG00015032827) ENSSFOG00015024295 BRWD1 (ENSSFOG00015025112) ##22 MIPEP (ENSSFOG00015009673) TNFRSF19 (ENSSFOG00015009641) SACS (ENSSFOG00015009594) sgcg (ENSSFOG00015009540) rps25 (ENSSFOG00015032370) trappc4 (ENSSFOG00015030016) slc37a4a (ENSSFOG00015009465) cfap45 (ENSSFOG00015009439) ENSSFOG00015009358 ENSSFOG00015009382 ENSSFOG00015009340 tbrg1 (ENSSFOG00015009308) siae (ENSSFOG00015009285) B3GAT1 (ENSSFOG00015009237) ENSSFOG00015009180 Clupeocephala ANCESTRAL SPECIES 270 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00980000198612 ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00980000203400 ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 Otomorpha ANCESTRAL SPECIES 339 ENSGT00670000098061 ENSGT00940000155207.a.b.j ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00980000198612 ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00980000203400 ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 Clupeiformes ANCESTRAL SPECIES 49 ENSGT00940000156844.a ENSGT00940000155478.hb.a.a ENSGT00950000182843.a.a.a.b.a.b ENSGT00450000040324.a.a.b ENSGT00940000167295.d ENSGT01090000260005.a.a.b.a.b.c ENSGT00940000155932.b.a ENSGT00670000098061 ENSGT00940000155207.a.b.j ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT01030000235087 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00980000203400 ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00390000009423.b ENSGT00530000064359.c.a ENSGT00940000155076.b.a.a.b ENSGT00940000164973 ENSGT00390000008756 ENSGT00390000012948.a ENSGT00940000155076.b.a.a.a Denticle herring MODERN SPECIES 10 zgc:171927 (ENSDCDG00000032114) zgc:113149 (ENSDCDG00000032117) zgc:101731 (ENSDCDG00000032119) capns1b (ENSDCDG00000032121) capns1b (ENSDCDG00000032127) zgc:162698 (ENSDCDG00000032132) ENSDCDG00000032136 si:ch211-137a8.2 (ENSDCDG00000032138) CLIP3 (ENSDCDG00000032142) ENSDCDG00000032155 bace2 (ENSDCDG00000032160) DSCAM (ENSDCDG00000032224) ENSDCDG00000032877 sh3bgr (ENSDCDG00000032881) get1 (ENSDCDG00000032884) BRWD1 (ENSDCDG00000032963) ##22 ENSDCDG00000034273 ENSDCDG00000034278 MIPEP (ENSDCDG00000034329) tnfrsf19 (ENSDCDG00000034593) SACS (ENSDCDG00000034600) sgcg (ENSDCDG00000034604) RPS25 (ENSDCDG00000034608) trappc4 (ENSDCDG00000034612) slc37a4a (ENSDCDG00000034616) yif1b (ENSDCDG00000034618) naxe (ENSDCDG00000034622) ENSDCDG00000034623 si:cabz01090165.1 (ENSDCDG00000034625) bloc1s3 (ENSDCDG00000034629) trappc6bl (ENSDCDG00000034632) Atlantic herring MODERN SPECIES 25 ENSCHAG00000016134 ENSCHAG00000016162 ENSCHAG00000016194 ENSCHAG00000016292 ENSCHAG00000016495 ENSCHAG00000016625 vezf1b (ENSCHAG00000016649) ENSCHAG00000016732 TMPRSS2 (ENSCHAG00000016841) bace2 (ENSCHAG00000016882) DSCAM (ENSCHAG00000016941) ENSCHAG00000018300 sh3bgr (ENSCHAG00000018319) ENSCHAG00000018323 GET1 (ENSCHAG00000018363) BRWD1 (ENSCHAG00000018411) ##22 MIPEP (ENSCHAG00000019957) tnfrsf19 (ENSCHAG00000021449) ENSCHAG00000021455 SACS (ENSCHAG00000021466) sgcg (ENSCHAG00000021486) rps25 (ENSCHAG00000021501) trappc4 (ENSCHAG00000021522) slc37a4a (ENSCHAG00000021559) yif1b (ENSCHAG00000021618) ENSCHAG00000021693 ENSCHAG00000021697 ENSCHAG00000021701 ENSCHAG00000021704 si:cabz01090165.1 (ENSCHAG00000021705) ENSCHAG00000021714 Otophysi ANCESTRAL SPECIES 276 ENSGT00940000160281 ENSGT00940000161057 ENSGT00940000154866.A ENSGT00940000157514.a ENSGT00940000160500 ENSGT01090000260005.a.b.a.b.b.i ENSGT00390000017267 ENSGT00670000098061 ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00950000183107.a.b.a ##22 ENSGT00940000160165.a Characiphysae ANCESTRAL SPECIES 50 ENSGT00940000161057 ENSGT00940000154866.A ENSGT00940000157514.a ENSGT00940000160500 ENSGT01090000260005.a.b.a.b.b.i ENSGT00390000017267 ENSGT00670000098061 ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01030000235087 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00950000183107.a.b.a ##22 ENSGT00940000160165.a ENSGT00390000006095 ENSGT00940000162075.a.a ENSGT00910000144227 ENSGT00940000161872 ENSGT00390000000259.k.a ENSGT00940000166060 ENSGT00940000155106 ENSGT00390000014167 ENSGT00530000063693.a.a Characiphysae_b ANCESTRAL SPECIES 54 ENSGT00940000160281 ENSGT00940000161057 ENSGT00940000154866.A ENSGT00940000157514.a ENSGT00940000160500 ENSGT01090000260005.a.b.a.b.b.i ENSGT00390000017267 ENSGT00670000098061 ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT01030000235087 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00950000183107.a.b.a ##22 ENSGT00940000160165.a ENSGT00390000006095 ENSGT00940000162075.a.a ENSGT00910000144227 ENSGT00940000161872 ENSGT00390000000259.k.a ENSGT00940000166060 ENSGT00940000155106 ENSGT00390000014167 ENSGT00530000063693.a.a Characoidei ANCESTRAL SPECIES 319 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00950000183107.a.b.a ##22 ENSGT00940000160165.a ENSGT00390000006095 ENSGT00940000162075.a.a ENSGT00910000144227 ENSGT00940000161872 Red-bellied piranha MODERN SPECIES 668 ENSPNAG00000023446 sh3bgr (ENSPNAG00000023464) ENSPNAG00000023475 get1 (ENSPNAG00000023497) BRWD1 (ENSPNAG00000023525) ##22 rbp2a (ENSPNAG00000023543) mrps22 (ENSPNAG00000023547) ENSPNAG00000023577 ENSPNAG00000023630 rps28 (ENSPNAG00000023640) ENSPNAG00000023653 ENSPNAG00000023730 ENSPNAG00000023747 Mexicana tetra MODERN SPECIES 1209 get1 (ENSAMXG00000012196) BRWD1 (ENSAMXG00000012221) ##22 rbp2a (ENSAMXG00000036297) mrps22 (ENSAMXG00000012287) urb1 (ENSAMXG00000012306) med17 (ENSAMXG00000016638) ENSAMXG00000016660 chrng (ENSAMXG00000016691) ENSAMXG00000030871 eif4e2 (ENSAMXG00000007905) CAPN10 (ENSAMXG00000042527) ENSAMXG00000041115 ccl20a.3 (ENSAMXG00000033603) ENSAMXG00000030615 CAMSAP2 (ENSAMXG00000038494) Electric eel MODERN SPECIES 415 bace2 (ENSEEEG00000007818) DSCAM (ENSEEEG00000007853) ENSEEEG00000007885 sh3bgr (ENSEEEG00000007886) get1 (ENSEEEG00000007887) BRWD1 (ENSEEEG00000007893) ##22 rbp2a (ENSEEEG00000007895) mrps22 (ENSEEEG00000007903) foxl2a (ENSEEEG00000007913) rps28 (ENSEEEG00000007915) ENSEEEG00000007916 MED26 (ENSEEEG00000007918) trnau1apb (ENSEEEG00000007920) CDY1 (ENSEEEG00000007922) rpp40 (ENSEEEG00000007924) fitm1l (ENSEEEG00000007925) PIK3CB (ENSEEEG00000007933) LIMD2 (ENSEEEG00000007965) gorasp1a (ENSEEEG00000007966) myh7l (ENSEEEG00000007994) mrpl34 (ENSEEEG00000008221) Cyprinoidei ANCESTRAL SPECIES 127 ENSGT00940000160281 ENSGT00940000161057 ENSGT00940000154866.A ENSGT00940000157514.a ENSGT00940000160500 ENSGT01090000260005.a.b.a.b.b.i ENSGT00390000017267 ENSGT00670000098061 ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00940000165905 ENSGT00980000198612.h ENSGT00950000183107.a.b.a ##22 ENSGT00940000160165.a ENSGT01030000234642.a.b.b.d.b.c.a ENSGT00440000038159 ENSGT00940000158139.h ENSGT00390000014210 ENSGT00960000187861 ENSGT00940000165793 ENSGT00940000175321 ENSGT00940000153936.b ENSGT00950000182887.C.a.b ENSGT01100000263522.B.b.n.b ENSGT01100000263522.B.b.m ENSGT01100000263522.B.a ENSGT01100000263522.B.b.n.a.b Zebrafish MODERN SPECIES 6 si:ch73-311h14.2 (ENSDARG00000098999) mrps22 (ENSDARG00000018073) ech1 (ENSDARG00000012915) meis3 (ENSDARG00000002795) sirt2 (ENSDARG00000011488) dmac2 (ENSDARG00000096597) nop53 (ENSDARG00000100452) ATM (ENSDARG00000002385) bace2 (ENSDARG00000044781) DSCAM (ENSDARG00000028118) PCP4 (ENSDARG00000110729) ENSDARG00000090953 sh3bgr (ENSDARG00000021633) get1 (ENSDARG00000074271) si:ch73-281n10.2 (ENSDARG00000097102) ENSDARG00000074747 ##22 rbp2a (ENSDARG00000070038) hnrnpl2 (ENSDARG00000059303) chchd2 (ENSDARG00000059304) phkg1a (ENSDARG00000030604) ENSDARG00000091992 urb1 (ENSDARG00000060308) wdr62 (ENSDARG00000060312) ENSDARG00000043238 ENSDARG00000109384 arrb1 (ENSDARG00000043241) ENSDARG00000077211 ENSDARG00000105677 ENSDARG00000105683 or55a2 (ENSDARG00000105711) or55a1 (ENSDARG00000105671) Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 77 ENSGT00940000160281.n ENSGT00940000161057.n ENSGT00940000154866.A.c.b ENSGT00940000157514.a.c ENSGT00940000160500 ENSGT01090000260005.a.b.a.b.b.i.a ENSGT00390000017267.a ENSGT00670000098061 ENSGT00940000159548.g ENSGT00940000154678.a.a.b ENSGT01030000235087 ENSGT00940000165615.b ENSGT00940000159847.b.b ENSGT00940000165905 ENSGT00940000159847.b.a ENSGT00950000183107.a.b.a.c.a ##22 ENSGT00940000160165.a.e.a ENSGT01030000234642.a.b.b.d.b.c.a.f ENSGT00440000038159 ENSGT00940000158139.h.b ENSGT00390000014210 ENSGT00960000187861 ENSGT00940000165793.c.b ENSGT00940000153936.b.c.a ENSGT00950000182887.C.a.b.i.b ENSGT01100000263522.B.b.n.b.b ENSGT00940000158353.t ENSGT01030000234640.a.a.e.f.b ENSGT00950000183023.A.g.c.b.a.a ENSGT01030000234640.a.a.e.f.a.b.b.b Goldfish MODERN SPECIES 6 ENSCARG00000050850 meis3 (ENSCARG00000050764) ENSCARG00000050754 sirt2 (ENSCARG00000050602) dmac2 (ENSCARG00000050581) GJD2 (ENSCARG00000050566) nop53 (ENSCARG00000050462) ATM (ENSCARG00000050291) bace2 (ENSCARG00000050169) DSCAM (ENSCARG00000048654) ENSCARG00000048452 ENSCARG00000048445 ENSCARG00000048428 sh3bgr (ENSCARG00000048317) get1 (ENSCARG00000048265) ENSCARG00000048155 ##22 rbp2a (ENSCARG00000048048) hnrnpl2 (ENSCARG00000047659) chchd2 (ENSCARG00000047627) phkg1a (ENSCARG00000047537) urb1 (ENSCARG00000043079) ENSCARG00000042800 wdr62 (ENSCARG00000042669) ENSCARG00000042630 ENSCARG00000042622 ARRB1 (ENSCARG00000041979) ENSCARG00000041923 ENSCARG00000041855 ENSCARG00000041844 ENSCARG00000041827 ENSCARG00000041821 Cyprininae_a ANCESTRAL SPECIES 92 ENSGT00390000006095.a ENSGT00940000159610.r ENSGT00940000160281.n ENSGT00940000161057.n ENSGT00940000154866.A.c.b ENSGT00940000157514.a.c ENSGT00940000160500 ENSGT01090000260005.a.b.a.b.b.i.a ENSGT00390000017267.a ENSGT00670000098061 ENSGT00940000159548.g ENSGT00940000154678.a.a.b ENSGT00940000165615.b ENSGT00940000159847.b.b ENSGT00940000165905 ENSGT00950000183107.a.b.a.c.a ##22 ENSGT00940000160165.a.f ENSGT00530000064267.l ENSGT00940000159847.a ENSGT00940000164489 ENSGT00950000183107.a.b.a.d ##22 ENSGT00940000160165.a.e.a ENSGT01030000234642.a.b.b.d.b.c.a.f ENSGT00440000038159.g ENSGT00940000158139.h.b ENSGT00390000014210 ENSGT00960000187861 ENSGT00940000165793.c.b ENSGT00940000153936.b.c.a ENSGT00950000182887.C.a.b.i.b ENSGT01100000263522.B.b.n.a.a.b Common carp reference MODERN SPECIES 26 ech1 (ENSCCRG00000018563) ENSCCRG00000018642 meis3 (ENSCCRG00000068048) ENSCCRG00000027001 sirt2 (ENSCCRG00000027025) dmac2 (ENSCCRG00000027499) ENSCCRG00000058802 nop53 (ENSCCRG00000018713) ENSCCRG00000018719 bace2 (ENSCCRG00000036512) ENSCCRG00000016610 PCP4 (ENSCCRG00000013659) ENSCCRG00000010280 sh3bgr (ENSCCRG00000082047) get1 (ENSCCRG00000009175) ENSCCRG00000009108 ##22 rbp2a (ENSCCRG00000009103) hnrnpl2 (ENSCCRG00000007902) chchd2 (ENSCCRG00000007874) phkg1a (ENSCCRG00000007864) urb1 (ENSCCRG00000009083) ENSCCRG00000066613 wdr62 (ENSCCRG00000026209) ENSCCRG00000047513 ENSCCRG00000001902 ENSCCRG00000044573 ENSCCRG00000044554 ENSCCRG00000078386 ENSCCRG00000060511 ENSCCRG00000080562 or55a1 (ENSCCRG00000017894) Golden-line barbel MODERN SPECIES 4441 ENSSGRG00000002471 ##22 Cyprininae ANCESTRAL SPECIES 755 ENSGT00950000183107.a.b.a.c.b ##22 ENSGT00940000160165.a.e.b ENSGT01030000234642.a.b.b.d.b.c.a.e ENSGT00940000158139.h.a ENSGT00940000165793.c.a ENSGT00940000153936.b.c.b ENSGT00950000182887.C.a.b.j ENSGT01100000263522.B.b.n.a.a.a.a ENSGT01030000234640.a.a.f.c ENSGT00950000183023.A.g.d.a Goldfish MODERN SPECIES 764 mrps22 (ENSCARG00000025465) ech1 (ENSCARG00000025517) meis3 (ENSCARG00000026219) ENSCARG00000026273 sirt2 (ENSCARG00000026297) ENSCARG00000026372 GJD2 (ENSCARG00000026379) ENSCARG00000026384 bace2 (ENSCARG00000026392) DSCAM (ENSCARG00000026561) ENSCARG00000027641 ENSCARG00000027670 sh3bgr (ENSCARG00000027700) get1 (ENSCARG00000027788) ENSCARG00000027803 ENSCARG00000027851 ##22 rbp2a (ENSCARG00000028554) hnrnpl2 (ENSCARG00000028589) phkg1a (ENSCARG00000028791) wdr62 (ENSCARG00000028989) ENSCARG00000029044 arrb1 (ENSCARG00000029092) ENSCARG00000030430 ENSCARG00000030438 ENSCARG00000030444 or63a2 (ENSCARG00000030448) or64a1 (ENSCARG00000030473) GFA28 (ENSCARG00000030481) ENSCARG00000030504 Cyprininae_a ANCESTRAL SPECIES 153 ENSGT01040000240444.A.a.a.a.a.a.b ##31 ENSGT00940000157522.f ENSGT00940000162075.a.a.a ENSGT00390000006095.b ENSGT00940000159610.q ENSGT00940000160281.m ENSGT00940000161057.m ENSGT00940000154866.A.c.a ENSGT00940000157514.a.d ENSGT01090000260005.a.b.a.b.b.i.b ENSGT00940000159548.h ENSGT00940000154678.a.a.a ENSGT01030000235087 ENSGT00940000159847.b.a ENSGT00990000210494 ENSGT00950000183107.a.b.a.c.b ##22 ENSGT00940000160165.a.e.b ENSGT01030000234642.a.b.b.d.b.c.a.e ENSGT00440000038159.h ENSGT00940000158139.h.a ENSGT00940000165793.c.a ENSGT00940000153936.b.c.b ENSGT00950000182887.C.a.b.j Common carp reference MODERN SPECIES 39 meis3 (ENSCCRG00000011800) ENSCCRG00000080397 sirt2 (ENSCCRG00000018661) ENSCCRG00000018711 ENSCCRG00000060632 ENSCCRG00000068864 ENSCCRG00000028371 ENSCCRG00000076327 bace2 (ENSCCRG00000035987) ENSCCRG00000019611 PCP4 (ENSCCRG00000080163) ENSCCRG00000071445 ENSCCRG00000061179 ENSCCRG00000009160 sh3bgr (ENSCCRG00000073478) ENSCCRG00000009137 ##22 hnrnpl2 (ENSCCRG00000009018) ENSCCRG00000054190 wdr62 (ENSCCRG00000047519) ENSCCRG00000057910 ENSCCRG00000066709 arrb1 (ENSCCRG00000081133) ENSCCRG00000077190 ENSCCRG00000062930 ENSCCRG00000048273 ENSCCRG00000021018 ENSCCRG00000052266 ENSCCRG00000059182 ENSCCRG00000027944 ENSCCRG00000078754 ENSCCRG00000059540 Golden-line barbel MODERN SPECIES 1167 sh3bgr (ENSSGRG00000025408) ENSSGRG00000025407 ENSSGRG00000025406 BRWD1 (ENSSGRG00000025291) ##22 rbp2a (ENSSGRG00000025286) hnrnpl2 (ENSSGRG00000025112) chchd2 (ENSSGRG00000025111) phkg1a (ENSSGRG00000025076) wdr62 (ENSSGRG00000025075) arrb1 (ENSSGRG00000025065) ENSSGRG00000025059 ENSSGRG00000025055 or55a1 (ENSSGRG00000025053) ENSSGRG00000025052 Cyprininae ANCESTRAL SPECIES 630 ENSGT00940000157522.f ENSGT00940000162075.a.a ENSGT00390000006095.b ENSGT00940000159610.q ENSGT00940000160281.m ENSGT00940000161057.m ENSGT00940000154866.A.c.a ENSGT00940000157514.a.d ENSGT01090000260005.a.b.a.b.b.i.b ENSGT00940000159548.h ENSGT00940000154678.a.a.a ENSGT00530000064267.l ENSGT00940000159847.a ENSGT00940000164489 ENSGT00950000183107.a.b.a.d ##22 Cyprininae_a ANCESTRAL SPECIES 92 ENSGT00940000157514.a.c ENSGT00940000160500 ENSGT01090000260005.a.b.a.b.b.i.a ENSGT00390000017267.a ENSGT00670000098061 ENSGT00940000159548.g ENSGT00940000154678.a.a.b ENSGT00940000165615.b ENSGT00940000159847.b.b ENSGT00940000165905 ENSGT00950000183107.a.b.a.c.a ##22 ENSGT00940000160165.a.f ENSGT00530000064267.l ENSGT00940000159847.a ENSGT00940000164489 ENSGT00950000183107.a.b.a.d ##22 ENSGT00940000160165.a.e.a ENSGT01030000234642.a.b.b.d.b.c.a.f ENSGT00440000038159.g ENSGT00940000158139.h.b ENSGT00390000014210 ENSGT00960000187861 ENSGT00940000165793.c.b ENSGT00940000153936.b.c.a ENSGT00950000182887.C.a.b.i.b ENSGT01100000263522.B.b.n.a.a.b ENSGT01100000263522.B.b.n.a.a.a.b.a ENSGT00950000183048.b.b.d Golden-line barbel MODERN SPECIES 839 ATM (ENSSGRG00000046628) bace2 (ENSSGRG00000046604) DSCAM (ENSSGRG00000046602) PCP4 (ENSSGRG00000046601) sh3bgr (ENSSGRG00000046599) ENSSGRG00000046598 ENSSGRG00000046592 ##22 rbp2a (ENSSGRG00000046591) hnrnpl2 (ENSSGRG00000046459) Euteleosteomorpha ANCESTRAL SPECIES 7 ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00980000198612 ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00980000203400 ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.k.b ENSGT00550000075063 ENSGT00990000204162 ENSGT01100000263564.a Protacanthopterygii ANCESTRAL SPECIES 63 ENSGT00940000157962 ENSGT00390000001742.b ENSGT00390000007999 ENSGT00940000157806.f ENSGT00940000159690.b ENSGT00940000156163.i.b ENSGT00730000110920.a ENSGT00940000154907.a.a ENSGT00940000167100.a ENSGT01030000234626.E ENSGT00940000155207.a.b.i.a ENSGT00940000154678.a.b.c ENSGT01030000235187.a ENSGT00940000165615.a ENSGT00940000165905 ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b.h ENSGT00940000167170 ENSGT00550000074799 ENSGT00940000167172.a ENSGT01090000260024.B ENSGT00940000162761.b.b.b.c.a.a.a ENSGT01080000257336.a.c.a ENSGT00940000158112 ENSGT00940000158386.c ENSGT01030000234550.a.a.c.a.b.b ENSGT00390000015531 ENSGT00940000164245 Northern pike MODERN SPECIES zgc:112083 (ENSELUG00000019494) ENSELUG00000019466 med13b (ENSELUG00000019446) rps6kb1b (ENSELUG00000019321) tubd1 (ENSELUG00000019274) vmp1 (ENSELUG00000019247) ENSELUG00000019191 ATM (ENSELUG00000019146) bace2 (ENSELUG00000018655) DSCAM (ENSELUG00000018635) ENSELUG00000031958 PCP4 (ENSELUG00000029251) sh3bgr (ENSELUG00000018547) ENSELUG00000018496 GET1 (ENSELUG00000018486) BRWD1 (ENSELUG00000018454) ##22 MIPEP (ENSELUG00000018354) tnfrsf19 (ENSELUG00000018329) SACS (ENSELUG00000018309) sgcg (ENSELUG00000018259) ENSELUG00000031784 rps25 (ENSELUG00000034566) trappc4 (ENSELUG00000018229) slc37a4a (ENSELUG00000018208) cfap45 (ENSELUG00000030567) ENSELUG00000027971 cfap45 (ENSELUG00000018190) cltcb (ENSELUG00000018151) ENSELUG00000018042 polr2i (ENSELUG00000018012) ENSELUG00000031480 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 632 ENSGT00940000159847.f.a.b ENSGT00560000077266.b.p ENSGT00390000008610.a.b.a.a.b.b ENSGT00950000183107.a.b.a.e.b ##22 ENSGT00390000008610.a.b.a.a.b.a ENSGT00950000183107.a.b.a.e.a ##22 ENSGT00940000153259.a.a.b.g.a ENSGT00390000016695.v ENSGT00940000159187.k.b ENSGT00390000004856.o.a ENSGT00940000153761.B.eb ENSGT00730000111086.j ENSGT00730000111174.o ENSGT00950000183166.a.a.a.b.e.a.d.a Salmoninae_a ANCESTRAL SPECIES 3 ENSGT00940000157069.d ENSGT00390000007230.b.c ENSGT00940000154308.A.b.a.a.a.a ENSGT00390000012388.d ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548.n ENSGT00940000154678.a.a.m.a ENSGT00530000064267.m ENSGT00940000159847.e ENSGT00940000159847.f.a.b ENSGT00560000077266.b.p ENSGT00390000008610.a.b.a.a.b.b ENSGT00950000183107.a.b.a.e.b ##22 ENSGT00390000008610.a.b.a.a.b.a ENSGT00950000183107.a.b.a.e.a ##22 ENSGT00940000153259.a.a.b.g.a ENSGT00390000016695.v ENSGT00940000159187.k.b ENSGT00390000004856.o.a ENSGT00940000153761.B.eb ENSGT00730000111086.j ENSGT00730000111174.o ENSGT00950000183166.a.a.a.b.e.a.d.a ENSGT00940000156765.a.a.m.b ENSGT00390000017608.k.a ENSGT00940000160678.a.lc.a ENSGT00940000161006.n ENSGT00550000075063.u ENSGT00990000204162.d ENSGT01100000263564.a.n Salmo ANCESTRAL SPECIES 22 ENSGT00390000013680.b.b.k.a ENSGT00940000155062.b.d.a.e ENSGT00940000154203 ENSGT00940000157069.d ENSGT00390000007230.b.c ENSGT00940000154308.A.b.a.a.a.a ENSGT00390000012388.d ENSGT00670000098061.ec ENSGT00940000155207.a.b.i.b ENSGT00940000159548.n ENSGT00940000154678.a.a.m.a ENSGT00530000064267.m ENSGT00940000159847.e ENSGT00560000077266.b.p ENSGT00390000008610.a.b.a.a.b.a ENSGT00950000183107.a.b.a.e.a ##22 ENSGT00940000153259.a.a.b.g.a ENSGT00390000016695.v ENSGT00940000159187.k.b ENSGT00390000004856.o.a ENSGT00940000153761.B.eb ENSGT00730000111086.j ENSGT00730000111174.o ENSGT00950000183166.a.a.a.b.e.a.d.a ENSGT00940000156765.a.a.m.b ENSGT00940000156765.a.a.n ENSGT00390000017608.k.b.a ENSGT00940000160678.a.lc.a ENSGT00940000161006.n ENSGT00550000075063.v ENSGT00990000204162.d River trout MODERN SPECIES 4 ENSSTUG00000047778 med13b (ENSSTUG00000047840) rps6kb1b (ENSSTUG00000048572) tubd1 (ENSSTUG00000048781) vmp1 (ENSSTUG00000048793) ENSSTUG00000048843 ENSSTUG00000048847 ATM (ENSSTUG00000048910) TMPRSS2 (ENSSTUG00000049766) bace2 (ENSSTUG00000049778) DSCAM (ENSSTUG00000049801) PCP4 (ENSSTUG00000029546) sh3bgr (ENSSTUG00000029565) ENSSTUG00000029610 GET1 (ENSSTUG00000029614) BRWD1 (ENSSTUG00000029657) ##22 tnfrsf19 (ENSSTUG00000030193) SACS (ENSSTUG00000030213) sgcg (ENSSTUG00000030248) rps25 (ENSSTUG00000030267) trappc4 (ENSSTUG00000030342) slc37a4a (ENSSTUG00000030372) cfap45 (ENSSTUG00000030398) cltcb (ENSSTUG00000030472) VASP (ENSSTUG00000030972) SNRPD2 (ENSSTUG00000030986) ENSSTUG00000030994 pglyrp5 (ENSSTUG00000030997) polr2i (ENSSTUG00000031006) ENSSTUG00000031010 ENSSTUG00000031014 Atlantic salmon MODERN SPECIES 28 ENSSSAG00000037680 med13b (ENSSSAG00000075846) RPS6KB1 (ENSSSAG00000076163) ENSSSAG00000039970 VMP1 (ENSSSAG00000040043) ENSSSAG00000040316 ENSSSAG00000040367 atm (ENSSSAG00000040756) ENSSSAG00000098217 bace2 (ENSSSAG00000047471) DSCAM (ENSSSAG00000048521) pcp4 (ENSSSAG00000121956) sh3bgr (ENSSSAG00000050776) LCA5L (ENSSSAG00000050807) WRB (ENSSSAG00000050810) BRWD1 (ENSSSAG00000051173) ##22 ENSSSAG00000065588 ENSSSAG00000077967 trappc4 (ENSSSAG00000094815) RPS25 (ENSSSAG00000065665) ENSSSAG00000065718 ENSSSAG00000065732 ENSSSAG00000065798 ENSSSAG00000066204 SMD2 (ENSSSAG00000066218) ENSSSAG00000066232 pglyrp5 (ENSSSAG00000066236) ENSSSAG00000066243 ENSSSAG00000089811 ENSSSAG00000066253 ENSSSAG00000066271 Oncorhynchus ANCESTRAL SPECIES 14 ENSGT00870000136508.c.b.g ENSGT00940000154823.f ENSGT00390000013680.b.b.k.a ENSGT00940000155062.b.d.a.e ENSGT00940000157069.d ENSGT00390000007230.b.c ENSGT00940000154308.A.b.a.a.a.a ENSGT00390000012388.d ENSGT00670000098061 ENSGT00940000159548.n ENSGT00940000154678.a.a.m.a ENSGT00530000064267.m ENSGT00940000159847.f.a.b ENSGT00560000077266.b.p ENSGT00390000008610.a.b.a.a.b.b ENSGT00950000183107.a.b.a.e.a ##22 ENSGT00940000153259.a.a.b.g.a ENSGT00390000016695.v ENSGT00940000159187.k.b ENSGT00390000004856.o.a ENSGT00940000153761.B.eb ENSGT00730000111086.j.b ENSGT00730000111174.o ENSGT00950000183166.a.a.a.b.e.a.d.a ENSGT00940000156765.a.a.m.b ENSGT00390000017608.k.a ENSGT00940000160678.a.lc.a ENSGT00940000161006.n ENSGT00550000075063.u ENSGT00990000204162.d ENSGT01100000263564.a.n Rainbow trout MODERN SPECIES 16 ENSOMYG00000030177 med13b (ENSOMYG00000030822) ENSOMYG00000033692 ENSOMYG00000034026 ENSOMYG00000034276 ENSOMYG00000034295 ENSOMYG00000034525 ENSOMYG00000034665 bace2 (ENSOMYG00000034678) ENSOMYG00000034752 ENSOMYG00000068438 PCP4 (ENSOMYG00000066852) sh3bgr (ENSOMYG00000034919) ENSOMYG00000034950 GET1 (ENSOMYG00000034958) BRWD1 (ENSOMYG00000035122) ##22 TNFRSF19 (ENSOMYG00000035498) ENSOMYG00000035526 sgcg (ENSOMYG00000035538) ENSOMYG00000053574 RPS25 (ENSOMYG00000035561) trappc4 (ENSOMYG00000035598) slc37a4a (ENSOMYG00000035630) ENSOMYG00000033985 ENSOMYG00000035642 ENSOMYG00000035945 ENSOMYG00000037738 ENSOMYG00000037766 ENSOMYG00000037780 pglyrp5 (ENSOMYG00000037788) polr2i (ENSOMYG00000037806) Oncorhynchus_a ANCESTRAL SPECIES 32 ENSGT00530000063947.C.c.c ENSGT00940000154823.f ENSGT00390000013680.b.b.k.a ENSGT00940000155062.b.d.a.e ENSGT00940000157069.d ENSGT00390000007230.b.c ENSGT00940000154308.A.b.a.a.a.a.a ENSGT00390000012388.d ENSGT00670000098061 ENSGT00940000159548.n ENSGT00940000154678.a.a.m.a ENSGT00530000064267.m ENSGT00940000159847.f.a.b ENSGT00560000077266.b.p ENSGT00390000008610.a.b.a.a.b.b ENSGT00950000183107.a.b.a.e.a ##22 ENSGT00940000153259.a.a.b.g.a ENSGT00390000016695.v ENSGT00940000159187.k.b ENSGT00390000004856.o.a ENSGT00940000153761.B.eb ENSGT00730000111086.j.b ENSGT00730000111174.o ENSGT00950000183166.a.a.a.b.e.a.d.a ENSGT00940000156765.a.a.m.b ENSGT00390000017608.k.a ENSGT00940000160678.a.lc.a ENSGT00940000161006.n ENSGT00550000075063.u ENSGT00990000204162.d ENSGT01100000263564.a.n Coho salmon MODERN SPECIES 9 ENSOKIG00005013995 med13b (ENSOKIG00005013827) ENSOKIG00005013515 VMP1 (ENSOKIG00005013392) ENSOKIG00005013383 ENSOKIG00005013377 ENSOKIG00005013361 ENSOKIG00005025007 ATM (ENSOKIG00005024860) bace2 (ENSOKIG00005024749) DSCAM (ENSOKIG00005024367) PCP4 (ENSOKIG00005024307) sh3bgr (ENSOKIG00005024237) LCA5L (ENSOKIG00005024205) GET1 (ENSOKIG00005024181) BRWD1 (ENSOKIG00005022332) ##22 TNFRSF19 (ENSOKIG00005022197) SACS (ENSOKIG00005022146) sgcg (ENSOKIG00005022120) ENSOKIG00005022088 trappc4 (ENSOKIG00005022054) slc37a4a (ENSOKIG00005022025) cltcb (ENSOKIG00005021524) cfap45 (ENSOKIG00005021454) ENSOKIG00005021441 SNRPD2 (ENSOKIG00005021421) ENSOKIG00005021397 pglyrp5 (ENSOKIG00005021392) polr2i (ENSOKIG00005021354) ENSOKIG00005021328 ENSOKIG00005021321 Chinook salmon MODERN SPECIES 5 MED13 (ENSOTSG00005012848) rps6kb1b (ENSOTSG00005012975) ENSOTSG00005013044 vmp1 (ENSOTSG00005013046) ENSOTSG00005013068 ENSOTSG00005013069 ENSOTSG00005013070 ATM (ENSOTSG00005013089) ENSOTSG00005013109 bace2 (ENSOTSG00005013111) DSCAM (ENSOTSG00005013132) ENSOTSG00005014594 sh3bgr (ENSOTSG00005014599) ENSOTSG00005014604 GET1 (ENSOTSG00005014606) ENSOTSG00005014611 ##22 tnfrsf19 (ENSOTSG00005014683) SACS (ENSOTSG00005014685) sgcg (ENSOTSG00005014687) rps25 (ENSOTSG00005014688) trappc4 (ENSOTSG00005014690) slc37a4a (ENSOTSG00005014708) cfap45 (ENSOTSG00005014709) cltcb (ENSOTSG00005014714) VASP (ENSOTSG00005015451) SNRPD2 (ENSOTSG00005015452) ENSOTSG00005033963 pglyrp5 (ENSOTSG00005033965) polr2i (ENSOTSG00005033966) ENSOTSG00005033967 ENSOTSG00005033968 Huchen MODERN SPECIES 1640 SH3BGR (ENSHHUG00000034709) LCA5L (ENSHHUG00000034744) GET1 (ENSHHUG00000034757) ENSHHUG00000034782 ##22 tnfrsf19 (ENSHHUG00000034838) SACS (ENSHHUG00000034855) sgcg (ENSHHUG00000034871) rps25 (ENSHHUG00000034890) trappc4 (ENSHHUG00000034966) slc37a4a (ENSHHUG00000035032) cfap45 (ENSHHUG00000035037) ENSHHUG00000035075 Salmoninae ANCESTRAL SPECIES 632 ENSGT00940000159847.f.a.b ENSGT00560000077266.b.p ENSGT00390000008610.a.b.a.a.b.b ENSGT00950000183107.a.b.a.e.b ##22 ENSGT00390000008610.a.b.a.a.b.a ENSGT00950000183107.a.b.a.e.a ##22 ENSGT00940000153259.a.a.b.g.a ENSGT00390000016695.v ENSGT00940000159187.k.b ENSGT00390000004856.o.a ENSGT00940000153761.B.eb ENSGT00730000111086.j ENSGT00730000111174.o ENSGT00950000183166.a.a.a.b.e.a.d.a Huchen MODERN SPECIES 1463 ENSHHUG00000046817 SLA (ENSHHUG00000046853) ENSHHUG00000046864 ENSHHUG00000046865 mfsd14a2 (ENSHHUG00000046868) ENSHHUG00000046870 SH3BGRL (ENSHHUG00000046877) #20 ENSHHUG00000046903 GET1 (ENSHHUG00000046906) ENSHHUG00000046943 ##22 MIPEP (ENSHHUG00000046953) ENSHHUG00000047015 Salmoninae_a ANCESTRAL SPECIES 3 ENSGT00940000155062.b.d.a.e ENSGT00940000154203 ENSGT00940000157069.d ENSGT00390000007230.b.c ENSGT00940000154308.A.b.a.a.a.a ENSGT00390000012388.d ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548.n ENSGT00940000154678.a.a.m.a ENSGT00530000064267.m ENSGT00940000159847.e ENSGT00940000159847.f.a.b ENSGT00560000077266.b.p ENSGT00390000008610.a.b.a.a.b.b ENSGT00950000183107.a.b.a.e.b ##22 ENSGT00390000008610.a.b.a.a.b.a ENSGT00950000183107.a.b.a.e.a ##22 ENSGT00940000153259.a.a.b.g.a ENSGT00390000016695.v ENSGT00940000159187.k.b ENSGT00390000004856.o.a ENSGT00940000153761.B.eb ENSGT00730000111086.j ENSGT00730000111174.o ENSGT00950000183166.a.a.a.b.e.a.d.a ENSGT00940000156765.a.a.m.b ENSGT00390000017608.k.a ENSGT00940000160678.a.lc.a ENSGT00940000161006.n ENSGT00550000075063.u Salmo ANCESTRAL SPECIES 7 ENSGT00530000063947.C.c.d ENSGT00870000136508.c.b.h ENSGT00390000013680.b.b.k.b ENSGT00940000155062.b.d.a.f ENSGT00940000157069.c ENSGT00390000007230.b.d ENSGT00390000012388.c ENSGT00670000098061.dc ENSGT00940000159548.m ENSGT00940000154678.a.a.m.b ENSGT01030000235187.b.b ENSGT00940000165615.b ENSGT00940000159847.f.b ENSGT00560000077266.b.o ENSGT00390000008610.a.b.a.a.b.b ENSGT00950000183107.a.b.a.e.b ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b.g.b ENSGT00390000016695.u ENSGT00940000159187.k.a ENSGT00390000004856.o.b ENSGT00940000153761.B.db ENSGT00730000111086.i ENSGT00730000111174.p ENSGT00950000183166.a.a.a.b.e.a.d.b ENSGT00940000156765.a.a.m.a ENSGT00390000017608.k.b.b ENSGT00940000160678.a.lc.b ENSGT00940000161006.m ENSGT00990000204162.c ENSGT01100000263564.a.m Atlantic salmon MODERN SPECIES 12 zgc:112083 (ENSSSAG00000075048) med13b (ENSSSAG00000075136) rps6kb1b (ENSSSAG00000038645) tubd1 (ENSSSAG00000076249) vmp1 (ENSSSAG00000076254) ENSSSAG00000095706 ENSSSAG00000102380 ENSSSAG00000088954 bace2 (ENSSSAG00000076277) ENSSSAG00000076303 ENSSSAG00000076326 ENSSSAG00000105438 sh3bgr (ENSSSAG00000076342) ENSSSAG00000076366 GET1 (ENSSSAG00000099223) BRWD1 (ENSSSAG00000076419) ##22 MIPEP (ENSSSAG00000077681) TNFRSF19 (ENSSSAG00000116770) SACS (ENSSSAG00000077992) sgcg (ENSSSAG00000078004) trappc4 (ENSSSAG00000095081) RPS25 (ENSSSAG00000078018) slc37a4a (ENSSSAG00000078057) ENSSSAG00000078066 ENSSSAG00000078122 ENSSSAG00000120107 SMD2 (ENSSSAG00000078433) ENSSSAG00000078442 pglyrp5 (ENSSSAG00000047046) ENSSSAG00000047053 ENSSSAG00000112794 River trout MODERN SPECIES 18 WNT11 (ENSSTUG00000037604) DGAT2 (ENSSTUG00000037676) ENSSTUG00000037691 zgc:112083 (ENSSTUG00000037705) med13b (ENSSTUG00000037765) rps6kb1b (ENSSTUG00000038781) tubd1 (ENSSTUG00000039484) vmp1 (ENSSTUG00000039588) ENSSTUG00000040517 ENSSTUG00000040587 bace2 (ENSSTUG00000040624) ENSSTUG00000043011 ENSSTUG00000043037 sh3bgr (ENSSTUG00000043092) GET1 (ENSSTUG00000043283) BRWD1 (ENSSTUG00000043308) ##22 MIPEP (ENSSTUG00000043505) tnfrsf19 (ENSSTUG00000045269) SACS (ENSSTUG00000045288) sgcg (ENSSTUG00000045324) rps25 (ENSSTUG00000045337) trappc4 (ENSSTUG00000045346) slc37a4a (ENSSTUG00000045385) cfap45 (ENSSTUG00000045392) cltcb (ENSSTUG00000045480) VASP (ENSSTUG00000046259) SNRPD2 (ENSSTUG00000046267) ENSSTUG00000046286 pglyrp5 (ENSSTUG00000046294) ENSSTUG00000046303 ENSSTUG00000046307 Oncorhynchus ANCESTRAL SPECIES 24 ENSGT00530000063947.C.c.d ENSGT00870000136508.c.b.h ENSGT00390000013680.b.b.k.b ENSGT00940000155062.b.d.a.f ENSGT00940000157069.c ENSGT00390000007230.b.d ENSGT00390000012388.c ENSGT00940000159548.m ENSGT00940000154678.a.a.m.b ENSGT00530000064267.n ENSGT00940000165615.b ENSGT00940000156017.fb #20 ENSGT00560000077266.b.o ENSGT00940000159847.f.a.a ENSGT00940000165905 ENSGT00950000183107.a.b.a.e.b ##22 ENSGT00940000153259.a.a.b.g.b ENSGT00390000016695.u ENSGT00940000159187.k.a ENSGT00390000004856.o.b ENSGT00940000153761.B.db ENSGT00730000111086.i ENSGT00950000183166.a.a.a.b.e.a.d.b ENSGT00940000156765.a.a.m.a ENSGT00390000017608.k.b ENSGT00940000160678.a.lc.b ENSGT00940000161006.m ENSGT00550000075063.v ENSGT00990000204162.c ENSGT01100000263564.a.m ENSGT00950000183181.B.b.l.b.a Rainbow trout MODERN SPECIES 19 ENSOMYG00000060831 zgc:112083 (ENSOMYG00000045796) med13b (ENSOMYG00000045974) rps6kb1b (ENSOMYG00000046639) ENSOMYG00000046703 vmp1 (ENSOMYG00000046712) ENSOMYG00000046725 ENSOMYG00000046735 bace2 (ENSOMYG00000046757) ENSOMYG00000046821 PCP4 (ENSOMYG00000052464) ENSOMYG00000046904 ENSOMYG00000060063 sh3bgr (ENSOMYG00000046917) get1 (ENSOMYG00000072139) ENSOMYG00000046965 ##22 MIPEP (ENSOMYG00000056267) ENSOMYG00000037542 ENSOMYG00000069171 TNFRSF19 (ENSOMYG00000047063) SACS (ENSOMYG00000047070) sgcg (ENSOMYG00000047075) rs25 (ENSOMYG00000047081) ENSOMYG00000047085 ENSOMYG00000047092 ENSOMYG00000047134 ENSOMYG00000047144 ENSOMYG00000047145 ENSOMYG00000047157 ENSOMYG00000047166 ENSOMYG00000048049 Oncorhynchus_a ANCESTRAL SPECIES 25 ENSGT00870000136508.c.b.h ENSGT00390000013680.b.b.k.b ENSGT00940000155062.b.d.a.f ENSGT00940000157069.c ENSGT00390000007230.b.d ENSGT00940000154308.A.b.a.a.a.a.b ENSGT00390000012388.c ENSGT00940000159548.m ENSGT00940000154678.a.a.m.b ENSGT01030000235187.b.b ENSGT00940000165615.b ENSGT00940000159847.f.a.a ENSGT00940000156017.fb #20 ENSGT00560000077266.b.o ENSGT00940000165905 ENSGT00950000183107.a.b.a.e.b ##22 ENSGT00940000153259.a.a.b.g.b ENSGT00390000016695.u ENSGT00940000159187.k.a ENSGT00390000004856.o.b ENSGT00940000153761.B.db ENSGT00730000111086.i ENSGT00950000183166.a.a.a.b.e.a.d.b ENSGT00940000156765.a.a.m.a ENSGT00390000017608.k.b ENSGT00940000160678.a.lc.b ENSGT00940000161006.m ENSGT00550000075063.v ENSGT00990000204162.c ENSGT01100000263564.a.m ENSGT00950000183181.B.b.l.b.a Coho salmon MODERN SPECIES 6 ENSOKIG00005025537 zgc:112083 (ENSOKIG00005025572) med13b (ENSOKIG00005025823) rps6kb1b (ENSOKIG00005026801) tubd1 (ENSOKIG00005027110) vmp1 (ENSOKIG00005027161) ENSOKIG00005027360 ENSOKIG00005027440 bace2 (ENSOKIG00005027472) DSCAM (ENSOKIG00005027691) ENSOKIG00005028967 ENSOKIG00005028982 ENSOKIG00005029010 #20 ENSOKIG00005029085 get1 (ENSOKIG00005029110) ENSOKIG00005029161 ##22 MIPEP (ENSOKIG00005029922) TNFRSF19 (ENSOKIG00005030602) SACS (ENSOKIG00005030615) sgcg (ENSOKIG00005030640) ENSOKIG00005030669 trappc4 (ENSOKIG00005030730) CFAP45 (ENSOKIG00005030846) SLC37A4 (ENSOKIG00005030874) ENSOKIG00005031199 VASP (ENSOKIG00005035658) SNRPD2 (ENSOKIG00005035683) ENSOKIG00005035728 pglyrp5 (ENSOKIG00005035737) polr2i (ENSOKIG00005035837) ENSOKIG00005035890 Chinook salmon MODERN SPECIES 4 thap12b (ENSOTSG00005043666) ENSOTSG00005043667 zgc:112083 (ENSOTSG00005043668) med13b (ENSOTSG00005043675) rps6kb1b (ENSOTSG00005044037) tubd1 (ENSOTSG00005044787) vmp1 (ENSOTSG00005044790) ENSOTSG00005044802 ENSOTSG00005044807 bace2 (ENSOTSG00005044809) DSCAM (ENSOTSG00005044816) ENSOTSG00005044961 ENSOTSG00005044962 sh3bgr (ENSOTSG00005044963) get1 (ENSOTSG00005001681) ENSOTSG00005001688 ##22 MIPEP (ENSOTSG00005001720) ENSOTSG00005002691 tnfrsf19 (ENSOTSG00005002694) SACS (ENSOTSG00005002699) sgcg (ENSOTSG00005002703) rps25 (ENSOTSG00005002708) trappc4 (ENSOTSG00005002733) slc37a4a (ENSOTSG00005002737) cltcb (ENSOTSG00005002831) VASP (ENSOTSG00005006100) SNRPD2 (ENSOTSG00005006101) ENSOTSG00005006128 pglyrp5 (ENSOTSG00005006132) ENSOTSG00005006173 ENSOTSG00005006183 Salmoninae ANCESTRAL SPECIES ENSGT00950000183107.a.b.a.f ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00950000183107.a.b.a.f ##22 Oncorhynchus ANCESTRAL SPECIES ENSGT00950000183107.a.b.a.f ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00950000183107.a.b.a.f ##22 Chinook salmon MODERN SPECIES 369 u2af1 (ENSOTSG00005028459) sc:d189 (ENSOTSG00005028461) ENSOTSG00005028462 ENSOTSG00005028463 ENSOTSG00005028464 ENSOTSG00005028465 ENSOTSG00005028467 ENSOTSG00005028468 ENSOTSG00005028469 ##22 ENSOTSG00005028472 ENSOTSG00005028473 ENSOTSG00005028474 Huchen DUPLICATION Huchen MODERN SPECIES 7427 ENSHHUG00000001596 ##22 Huchen MODERN SPECIES 7522 ENSHHUG00000004005 ##22 Acanthomorphata ANCESTRAL SPECIES 37 ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00980000198612 ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00980000203400 ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 Cod MODERN SPECIES 7 gmps (ENSGMOG00000009029) slc33a1 (ENSGMOG00000009015) rps6kb1b (ENSGMOG00000008995) ENSGMOG00000008987 vmp1 (ENSGMOG00000008975) ENSGMOG00000035807 ENSGMOG00000008875 bace2 (ENSGMOG00000008848) ENSGMOG00000008806 ENSGMOG00000036534 ENSGMOG00000033004 PCP4 (ENSGMOG00000026737) ENSGMOG00000008789 sh3bgr (ENSGMOG00000008783) ENSGMOG00000008777 BRWD1 (ENSGMOG00000033322) ##22 MIPEP (ENSGMOG00000008729) ENSGMOG00000008714 SACS (ENSGMOG00000008699) ENSGMOG00000011502 ENSGMOG00000013368 ENSGMOG00000032138 GIT1 (ENSGMOG00000017789) ankrd13b (ENSGMOG00000018065) SSH2 (ENSGMOG00000018094) slc6a4a (ENSGMOG00000018214) blmh (ENSGMOG00000018237) ENSGMOG00000031675 ENSGMOG00000018257 ENSGMOG00000000802 ENSGMOG00000001053 Euacanthomorphacea ANCESTRAL SPECIES 8 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.a ENSGT00940000178743 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00980000198612 ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00980000203400 ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 Pinecone sodierfish MODERN SPECIES 4 kcnab1a (ENSMMDG00005017454) ENSMMDG00005017131 gmps (ENSMMDG00005016018) slc33a1 (ENSMMDG00005016008) RPS6KB1 (ENSMMDG00005013554) tubd1 (ENSMMDG00005013533) vmp1 (ENSMMDG00005013529) ENSMMDG00005013525 ATM (ENSMMDG00005012316) ENSMMDG00005012284 bace2 (ENSMMDG00005012072) DSCAM (ENSMMDG00005012058) ENSMMDG00005012054 sh3bgr (ENSMMDG00005012051) GET1 (ENSMMDG00005012047) BRWD1 (ENSMMDG00005011464) ##22 MIPEP (ENSMMDG00005008358) tnfrsf19 (ENSMMDG00005008287) ENSMMDG00005008284 SACS (ENSMMDG00005008283) sgcg (ENSMMDG00005008249) rps25 (ENSMMDG00005008239) trappc4 (ENSMMDG00005008227) slc37a4a (ENSMMDG00005008222) cfap45 (ENSMMDG00005008215) cltcb (ENSMMDG00005006704) VASP (ENSMMDG00005006688) snrpd2 (ENSMMDG00005006685) ENSMMDG00005006684 pglyrp5 (ENSMMDG00005006682) polr2i (ENSMMDG00005006681) Percomorphaceae ANCESTRAL SPECIES 8 ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00980000198612 ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00980000203400 ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 111 gmps (ENSHCOG00000011768) slc33a1 (ENSHCOG00000011734) rps6kb1b (ENSHCOG00000011708) tubd1 (ENSHCOG00000011655) vmp1 (ENSHCOG00000011637) ENSHCOG00000011606 ENSHCOG00000011601 ENSHCOG00000011572 TMPRSS2 (ENSHCOG00000011555) bace2 (ENSHCOG00000011505) DSCAM (ENSHCOG00000011496) ENSHCOG00000011448 sh3bgr (ENSHCOG00000011431) GET1 (ENSHCOG00000011367) ENSHCOG00000011348 ##22 ENSHCOG00000011328 ##22 MIPEP (ENSHCOG00000011277) tnfrsf19 (ENSHCOG00000011223) SACS (ENSHCOG00000011214) sgcg (ENSHCOG00000011196) rps25 (ENSHCOG00000011191) trappc4 (ENSHCOG00000011182) slc37a4a (ENSHCOG00000011159) rps25 (ENSHCOG00000011130) trappc4 (ENSHCOG00000011115) cfap45 (ENSHCOG00000011098) cltcb (ENSHCOG00000011070) ENSHCOG00000010991 ENSHCOG00000010978 snrpd2 (ENSHCOG00000010973) polr2i (ENSHCOG00000010967) Tiger tail seahorse MODERN SPECIES 111 ENSHCOG00000011815 gmps (ENSHCOG00000011768) slc33a1 (ENSHCOG00000011734) rps6kb1b (ENSHCOG00000011708) tubd1 (ENSHCOG00000011655) vmp1 (ENSHCOG00000011637) ENSHCOG00000011606 ENSHCOG00000011601 ENSHCOG00000011572 TMPRSS2 (ENSHCOG00000011555) bace2 (ENSHCOG00000011505) DSCAM (ENSHCOG00000011496) ENSHCOG00000011448 sh3bgr (ENSHCOG00000011431) GET1 (ENSHCOG00000011367) ENSHCOG00000011348 ##22 ENSHCOG00000011328 ##22 MIPEP (ENSHCOG00000011277) tnfrsf19 (ENSHCOG00000011223) SACS (ENSHCOG00000011214) sgcg (ENSHCOG00000011196) rps25 (ENSHCOG00000011191) trappc4 (ENSHCOG00000011182) slc37a4a (ENSHCOG00000011159) rps25 (ENSHCOG00000011130) trappc4 (ENSHCOG00000011115) cfap45 (ENSHCOG00000011098) cltcb (ENSHCOG00000011070) ENSHCOG00000010991 ENSHCOG00000010978 snrpd2 (ENSHCOG00000010973) Percomorphaceae_B ANCESTRAL SPECIES 13 ENSGT00390000007230.b ENSGT00940000172904 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00980000198612 ENSGT00940000156017.fb #20 ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00980000203400 ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00940000177608 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 Ovalentaria ANCESTRAL SPECIES 8 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00940000172904 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Atherinomorphae ANCESTRAL SPECIES 15 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00940000172904 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Oryzias ANCESTRAL SPECIES 8 ENSGT00940000160473 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00940000172904 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000159847 ENSGT00940000165905 ENSGT00980000198612 ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Oryzias_b ANCESTRAL SPECIES 38 ENSGT00940000165905 ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Javanese ricefish MODERN SPECIES 4 wsb1 (ENSOJAG00000004292) ENSOJAG00000004569 ENSOJAG00000004761 ENSOJAG00000004767 ENSOJAG00000004779 ENSOJAG00000004799 PHLDB1 (ENSOJAG00000004899) ENSOJAG00000005023 zgc:113279 (ENSOJAG00000005033) ENSOJAG00000005064 ENSOJAG00000005281 ENSOJAG00000005300 ENSOJAG00000005335 ENSOJAG00000005391 get1 (ENSOJAG00000005524) BRWD1 (ENSOJAG00000005641) ##22 MIPEP (ENSOJAG00000008477) tnfrsf19 (ENSOJAG00000009533) SACS (ENSOJAG00000009552) sgcg (ENSOJAG00000009619) rps25 (ENSOJAG00000009673) trappc4 (ENSOJAG00000009698) slc37a4a (ENSOJAG00000009807) ENSOJAG00000009926 ENSOJAG00000010359 snrpd2 (ENSOJAG00000010389) ENSOJAG00000010411 pglyrp5 (ENSOJAG00000010415) polr2i (ENSOJAG00000010422) ENSOJAG00000010454 C5AR1 (ENSOJAG00000010470) Indian medaka DUPLICATION Indian medaka DUPLICATION Indian medaka MODERN SPECIES 16 snx25 (ENSOMEG00000019024) ENSOMEG00000018976 ENSOMEG00000018962 il1rapl2 (ENSOMEG00000018927) ENSOMEG00000018824 ENSOMEG00000018641 ENSOMEG00000018469 hdac3 (ENSOMEG00000018452) HDAC3 (ENSOMEG00000018417) hdac3 (ENSOMEG00000018392) ENSOMEG00000018382 HDAC3 (ENSOMEG00000018377) hdac3 (ENSOMEG00000018361) ENSOMEG00000018331 get1 (ENSOMEG00000018319) ENSOMEG00000018302 ##22 ENSOMEG00000018280 ##22 ENSOMEG00000018267 ##22 MIPEP (ENSOMEG00000018235) tnfrsf19 (ENSOMEG00000018157) SACS (ENSOMEG00000018116) sgcg (ENSOMEG00000018043) rps25 (ENSOMEG00000017978) trappc4 (ENSOMEG00000017932) slc37a4a (ENSOMEG00000017902) cfap45 (ENSOMEG00000000445) cltcb (ENSOMEG00000017800) VASP (ENSOMEG00000017543) ENSOMEG00000000439 hdac3 (ENSOMEG00000017507) ENSOMEG00000000644 Indian medaka MODERN SPECIES 16 ENSOMEG00000018962 il1rapl2 (ENSOMEG00000018927) ENSOMEG00000018824 ENSOMEG00000018641 ENSOMEG00000018469 hdac3 (ENSOMEG00000018452) HDAC3 (ENSOMEG00000018417) hdac3 (ENSOMEG00000018392) ENSOMEG00000018382 HDAC3 (ENSOMEG00000018377) hdac3 (ENSOMEG00000018361) ENSOMEG00000018331 get1 (ENSOMEG00000018319) ENSOMEG00000018302 ##22 ENSOMEG00000018280 ##22 ENSOMEG00000018267 ##22 MIPEP (ENSOMEG00000018235) tnfrsf19 (ENSOMEG00000018157) SACS (ENSOMEG00000018116) sgcg (ENSOMEG00000018043) rps25 (ENSOMEG00000017978) trappc4 (ENSOMEG00000017932) slc37a4a (ENSOMEG00000017902) cfap45 (ENSOMEG00000000445) cltcb (ENSOMEG00000017800) VASP (ENSOMEG00000017543) ENSOMEG00000000439 hdac3 (ENSOMEG00000017507) ENSOMEG00000000644 HDAC3 (ENSOMEG00000017479) ENSOMEG00000017461 Indian medaka MODERN SPECIES 16 ENSOMEG00000018976 ENSOMEG00000018962 il1rapl2 (ENSOMEG00000018927) ENSOMEG00000018824 ENSOMEG00000018641 ENSOMEG00000018469 hdac3 (ENSOMEG00000018452) HDAC3 (ENSOMEG00000018417) hdac3 (ENSOMEG00000018392) ENSOMEG00000018382 HDAC3 (ENSOMEG00000018377) hdac3 (ENSOMEG00000018361) ENSOMEG00000018331 get1 (ENSOMEG00000018319) ENSOMEG00000018302 ##22 ENSOMEG00000018280 ##22 ENSOMEG00000018267 ##22 MIPEP (ENSOMEG00000018235) tnfrsf19 (ENSOMEG00000018157) SACS (ENSOMEG00000018116) sgcg (ENSOMEG00000018043) rps25 (ENSOMEG00000017978) trappc4 (ENSOMEG00000017932) slc37a4a (ENSOMEG00000017902) cfap45 (ENSOMEG00000000445) cltcb (ENSOMEG00000017800) VASP (ENSOMEG00000017543) ENSOMEG00000000439 hdac3 (ENSOMEG00000017507) ENSOMEG00000000644 HDAC3 (ENSOMEG00000017479) Oryzias_a ANCESTRAL SPECIES 8 ENSGT00940000156760.e.b ENSGT00940000160473 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000159548 ENSGT00940000154678.a.a.c ENSGT00530000064267 ENSGT00940000159847 ENSGT00940000165905 ENSGT00980000198612 ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 ENSGT01100000263564.a Japanese Medaka HdrR MODERN SPECIES 4 slc33a1 (ENSORLG00000012608) rps6kb1b (ENSORLG00000012636) tubd1 (ENSORLG00000012665) vmp1 (ENSORLG00000012702) ENSORLG00000012728 ENSORLG00000027668 ENSORLG00000030057 bace2 (ENSORLG00000012838) ENSORLG00000012892 PCP4 (ENSORLG00000029260) ENSORLG00000024531 ENSORLG00000029158 sh3bgr (ENSORLG00000012924) get1 (ENSORLG00000012945) ENSORLG00000024611 ENSORLG00000024206 ##22 MIPEP (ENSORLG00000012997) tnfrsf19 (ENSORLG00000013020) SACS (ENSORLG00000013037) sgcg (ENSORLG00000013077) rps25 (ENSORLG00000013087) trappc4 (ENSORLG00000013098) slc37a4a (ENSORLG00000013125) cfap45 (ENSORLG00000013148) cltcb (ENSORLG00000013227) ENSORLG00000013271 snrpd2 (ENSORLG00000026725) foxg1c (ENSORLG00000023339) pglyrp5 (ENSORLG00000013289) polr2i (ENSORLG00000013308) ENSORLG00000024020 Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 312 ENSOSIG00000005303 DSCAM (ENSOSIG00000005313) BRWD1 (ENSOSIG00000005984) ##22 MIPEP (ENSOSIG00000006303) tnfrsf19 (ENSOSIG00000006469) SACS (ENSOSIG00000006494) sgcg (ENSOSIG00000006508) ENSOSIG00000006580 VASP (ENSOSIG00000006584) ENSOSIG00000006589 pglyrp5 (ENSOSIG00000006591) polr2i (ENSOSIG00000006592) ENSOSIG00000006594 ENSOSIG00000006595 ENSOSIG00000006596 ENSOSIG00000006624 ENSOSIG00000006790 Chinese medaka MODERN SPECIES 662 sh3bgr (ENSOSIG00000022818) get1 (ENSOSIG00000022817) ENSOSIG00000022816 ##22 Cyprinodontiformes ANCESTRAL SPECIES 12 ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000156017.fb #20 ENSGT00390000008610.a.b.a.a.b ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856.v ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Cyprinodontoidei ANCESTRAL SPECIES 9 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856.v ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Poeciliinae ANCESTRAL SPECIES 14 ENSGT00940000156760.e.b ENSGT00940000160473 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000159847 ENSGT00940000165905 ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856.v ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Platyfish MODERN SPECIES 9 ssr3 (ENSXMAG00000017141) KCNAB1 (ENSXMAG00000021396) ENSXMAG00000017051 gmps (ENSXMAG00000017018) slc33a1 (ENSXMAG00000017004) rps6kb1b (ENSXMAG00000024330) tubd1 (ENSXMAG00000016973) vmp1 (ENSXMAG00000029668) ENSXMAG00000022466 ATM (ENSXMAG00000016925) bace2 (ENSXMAG00000016905) DSCAM (ENSXMAG00000016834) PCP4 (ENSXMAG00000023518) sh3bgr (ENSXMAG00000021184) get1 (ENSXMAG00000024681) ENSXMAG00000026478 ##22 MIPEP (ENSXMAG00000001178) tnfrsf19 (ENSXMAG00000001169) SACS (ENSXMAG00000001161) sgcg (ENSXMAG00000001141) rps25 (ENSXMAG00000001136) trappc4 (ENSXMAG00000001123) slc37a4a (ENSXMAG00000001093) ENSXMAG00000001086 cltcb (ENSXMAG00000001032) ENSXMAG00000001020 snrpd2 (ENSXMAG00000001018) ENSXMAG00000029697 pglyrp5 (ENSXMAG00000029057) polr2i (ENSXMAG00000021278) ENSXMAG00000023186 Poecilia ANCESTRAL SPECIES 2 ENSGT00940000156760.e.b ENSGT00940000160473 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00940000165615.b ENSGT00940000159847 ENSGT00940000165905 ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856.v ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Guppy MODERN SPECIES 443 TIPARP (ENSPREG00000016895) ssr3 (ENSPREG00000016878) KCNAB1 (ENSPREG00000016824) ENSPREG00000016759 gmps (ENSPREG00000016715) slc33a1 (ENSPREG00000016678) rps6kb1b (ENSPREG00000016611) tubd1 (ENSPREG00000016574) vmp1 (ENSPREG00000016550) ENSPREG00000016529 ATM (ENSPREG00000016478) bace2 (ENSPREG00000016445) DSCAM (ENSPREG00000016331) sh3bgr (ENSPREG00000016297) get1 (ENSPREG00000016282) BRWD1 (ENSPREG00000016228) ##22 MIPEP (ENSPREG00000016159) TNFRSF19 (ENSPREG00000016118) ENSPREG00000016094 sdhdb (ENSPREG00000016080) timm8b (ENSPREG00000016068) ENSPREG00000016062 SNX19 (ENSPREG00000016037) ENSPREG00000016025 ADAMTS8 (ENSPREG00000016012) zbtb44 (ENSPREG00000015991) ENSPREG00000015964 ENSPREG00000015952 SORL1 (ENSPREG00000015869) ENSPREG00000015844 ENSPREG00000015827 NAME_6 ANCESTRAL SPECIES 71 ENSGT00940000156760.f ENSGT00940000160473 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00940000165615.b ENSGT00940000159847 ENSGT00940000165905 ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856.v ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Amazon molly MODERN SPECIES 642 ENSPFOG00000016314 ##22 MIPEP (ENSPFOG00000016326) TNFRSF19 (ENSPFOG00000016408) SACS (ENSPFOG00000016423) sgcg (ENSPFOG00000016458) rps25 (ENSPFOG00000016498) trappc4 (ENSPFOG00000016527) slc37a4a (ENSPFOG00000016553) cfap45 (ENSPFOG00000016578) cltcb (ENSPFOG00000016639) ENSPFOG00000016808 snrpd2 (ENSPFOG00000016809) ENSPFOG00000020875 pglyrp5 (ENSPFOG00000016812) polr2i (ENSPFOG00000016816) C5AR1 (ENSPFOG00000020876) Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 1941 PCP4 (ENSPLAG00000009561) sh3bgr (ENSPLAG00000009556) get1 (ENSPLAG00000009513) ENSPLAG00000009497 ##22 Sailfin molly MODERN SPECIES 129 ENSPLAG00000011267 ##22 MIPEP (ENSPLAG00000011228) TNFRSF19 (ENSPLAG00000011007) SACS (ENSPLAG00000010998) sgcg (ENSPLAG00000010961) rps25 (ENSPLAG00000010946) trappc4 (ENSPLAG00000010941) slc37a4a (ENSPLAG00000010915) cfap45 (ENSPLAG00000010876) cltcb (ENSPLAG00000010826) ENSPLAG00000010730 snrpd2 (ENSPLAG00000010725) ENSPLAG00000000238 pglyrp5 (ENSPLAG00000010695) polr2i (ENSPLAG00000010639) ENSPLAG00000010633 NAME_4 ANCESTRAL SPECIES 203 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856.v ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Mummichog MODERN SPECIES 382 sh3bgr (ENSFHEG00000015190) ENSFHEG00000015197 get1 (ENSFHEG00000015223) ENSFHEG00000015239 ##22 BRWD1 (ENSFHEG00000015248) ##22 MIPEP (ENSFHEG00000015331) TNFRSF19 (ENSFHEG00000015343) SACS (ENSFHEG00000015368) sgcg (ENSFHEG00000015375) rps25 (ENSFHEG00000015395) trappc4 (ENSFHEG00000015416) slc37a4a (ENSFHEG00000015449) cfap45 (ENSFHEG00000015457) cltcb (ENSFHEG00000015578) ENSFHEG00000015584 snrpd2 (ENSFHEG00000015591) ENSFHEG00000015603 pglyrp5 (ENSFHEG00000015614) polr2i (ENSFHEG00000015659) ENSFHEG00000015677 Sheepshead minnow MODERN SPECIES 1556 ENSCVAG00000015052 sh3bgr (ENSCVAG00000015040) get1 (ENSCVAG00000015028) ENSCVAG00000015009 ##22 MIPEP (ENSCVAG00000014994) Aplocheiloidei ANCESTRAL SPECIES 50 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT01030000235087 ENSGT00940000159847 ENSGT00940000165905 ENSGT00530000064267 ENSGT00940000156017.fb #20 ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856.v ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Turquoise killifish MODERN SPECIES 1615 ENSNFUG00015015086 TUBD1 (ENSNFUG00015015119) VMP1 (ENSNFUG00015015209) ENSNFUG00015015401 Nfu_g_1_000287 (ENSNFUG00015015419) bace2 (ENSNFUG00015015535) ENSNFUG00015015567 ENSNFUG00015015573 DSCAM (ENSNFUG00015015815) ENSNFUG00015016711 ENSNFUG00015016717 ENSNFUG00015016718 ENSNFUG00015016722 SH3BGR (ENSNFUG00015016727) get1 (ENSNFUG00015016763) ENSNFUG00015016913 ##22 MIPEP (ENSNFUG00015019198) tnfrsf19 (ENSNFUG00015019365) SACS (ENSNFUG00015019450) sgcg (ENSNFUG00015019462) rps25 (ENSNFUG00015019465) TRAPPC4 (ENSNFUG00015019472) SLC37A4A (ENSNFUG00015019494) CCDC19 (ENSNFUG00015019498) cltcb (ENSNFUG00015019528) ENSNFUG00015019640 snrpd2 (ENSNFUG00015019674) ENSNFUG00015019727 pglyrp5 (ENSNFUG00015003833) polr2i (ENSNFUG00015003841) ENSNFUG00015003843 Mangrove rivulus MODERN SPECIES 51 ENSKMAG00000020819 gmps (ENSKMAG00000020846) slc33a1 (ENSKMAG00000020878) rps6kb1b (ENSKMAG00000000145) tubd1 (ENSKMAG00000000289) vmp1 (ENSKMAG00000000301) ENSKMAG00000000385 ENSKMAG00000000398 ENSKMAG00000000424 ENSKMAG00000000451 bace2 (ENSKMAG00000000463) DSCAM (ENSKMAG00000000525) PCP4 (ENSKMAG00000000723) SH3BGRL (ENSKMAG00000000741) #20 GET1 (ENSKMAG00000000772) ENSKMAG00000000800 ##22 MIPEP (ENSKMAG00000000843) tnfrsf19 (ENSKMAG00000000938) SACS (ENSKMAG00000000970) sgcg (ENSKMAG00000001046) rps25 (ENSKMAG00000001088) trappc4 (ENSKMAG00000001096) slc37a4a (ENSKMAG00000001121) cfap45 (ENSKMAG00000001182) cltcb (ENSKMAG00000001324) VASP (ENSKMAG00000001516) snrpd2 (ENSKMAG00000001539) pglyrp5 (ENSKMAG00000001559) polr2i (ENSKMAG00000001567) ENSKMAG00000001604 C5AR1 (ENSKMAG00000001625) Ovalentaria_B ANCESTRAL SPECIES 11 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00940000172904 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Pomacentridae ANCESTRAL SPECIES 5 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00940000156017.fb #20 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000160678.a ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 298 gmps (ENSSPAG00000017294) slc33a1 (ENSSPAG00000017251) rps6kb1b (ENSSPAG00000017178) tubd1 (ENSSPAG00000017131) vmp1 (ENSSPAG00000017088) ENSSPAG00000017062 ATM (ENSSPAG00000016715) ENSSPAG00000016672 bace2 (ENSSPAG00000016639) DSCAM (ENSSPAG00000016558) PCP4 (ENSSPAG00000016538) ENSSPAG00000016519 SH3BGRL (ENSSPAG00000016427) #20 get1 (ENSSPAG00000016386) ENSSPAG00000016375 ##22 ENSSPAG00000016327 ##22 MIPEP (ENSSPAG00000016280) tnfrsf19 (ENSSPAG00000016259) SACS (ENSSPAG00000016240) sgcg (ENSSPAG00000016214) rps25 (ENSSPAG00000016203) trappc4 (ENSSPAG00000016181) slc37a4a (ENSSPAG00000016165) cfap45 (ENSSPAG00000016083) cltcb (ENSSPAG00000015858) VASP (ENSSPAG00000015781) snrpd2 (ENSSPAG00000015767) ENSSPAG00000015757 pglyrp5 (ENSSPAG00000015743) polr2i (ENSSPAG00000015734) ENSSPAG00000015721 Bicolor damselfish MODERN SPECIES 298 ENSSPAG00000017345 gmps (ENSSPAG00000017294) slc33a1 (ENSSPAG00000017251) rps6kb1b (ENSSPAG00000017178) tubd1 (ENSSPAG00000017131) vmp1 (ENSSPAG00000017088) ENSSPAG00000017062 ATM (ENSSPAG00000016715) ENSSPAG00000016672 bace2 (ENSSPAG00000016639) DSCAM (ENSSPAG00000016558) PCP4 (ENSSPAG00000016538) ENSSPAG00000016519 SH3BGRL (ENSSPAG00000016427) #20 get1 (ENSSPAG00000016386) ENSSPAG00000016375 ##22 ENSSPAG00000016327 ##22 MIPEP (ENSSPAG00000016280) tnfrsf19 (ENSSPAG00000016259) SACS (ENSSPAG00000016240) sgcg (ENSSPAG00000016214) rps25 (ENSSPAG00000016203) trappc4 (ENSSPAG00000016181) slc37a4a (ENSSPAG00000016165) cfap45 (ENSSPAG00000016083) cltcb (ENSSPAG00000015858) VASP (ENSSPAG00000015781) snrpd2 (ENSSPAG00000015767) ENSSPAG00000015757 pglyrp5 (ENSSPAG00000015743) polr2i (ENSSPAG00000015734) Pomacentridae_A ANCESTRAL SPECIES 4 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00940000156017.fb #20 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000160678.a ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Amphiprion ANCESTRAL SPECIES 6 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00940000156017.fb #20 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000160678.a ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Clown anemonefish MODERN SPECIES 3409 gmps (ENSAOCG00000003292) slc33a1 (ENSAOCG00000003278) rps6kb1b (ENSAOCG00000003270) tubd1 (ENSAOCG00000003256) vmp1 (ENSAOCG00000003247) ENSAOCG00000003237 ATM (ENSAOCG00000003225) ENSAOCG00000003194 bace2 (ENSAOCG00000003180) DSCAM (ENSAOCG00000003164) PCP4 (ENSAOCG00000003144) ENSAOCG00000003134 SH3BGRL (ENSAOCG00000000079) #20 ENSAOCG00000003106 GET1 (ENSAOCG00000024215) BRWD1 (ENSAOCG00000024196) ##22 MIPEP (ENSAOCG00000024152) tnfrsf19 (ENSAOCG00000024121) SACS (ENSAOCG00000024107) sgcg (ENSAOCG00000024097) Orange clownfish MODERN SPECIES 23 ENSAPEG00000020169 gmps (ENSAPEG00000020189) slc33a1 (ENSAPEG00000020265) rps6kb1b (ENSAPEG00000020308) tubd1 (ENSAPEG00000020380) vmp1 (ENSAPEG00000020424) ENSAPEG00000020478 ATM (ENSAPEG00000020503) ENSAPEG00000020652 bace2 (ENSAPEG00000020666) DSCAM (ENSAPEG00000020708) PCP4 (ENSAPEG00000020783) ENSAPEG00000020792 sh3bgr (ENSAPEG00000020837) GET1 (ENSAPEG00000020919) BRWD1 (ENSAPEG00000020945) ##22 MIPEP (ENSAPEG00000021052) tnfrsf19 (ENSAPEG00000021145) SACS (ENSAPEG00000021169) sgcg (ENSAPEG00000021190) rps25 (ENSAPEG00000021211) trappc4 (ENSAPEG00000021231) slc37a4a (ENSAPEG00000021249) cfap45 (ENSAPEG00000021279) cltcb (ENSAPEG00000021354) ENSAPEG00000021676 snrpd2 (ENSAPEG00000021711) ENSAPEG00000021721 pglyrp5 (ENSAPEG00000021734) polr2i (ENSAPEG00000021748) ENSAPEG00000021772 Spiny chromis MODERN SPECIES 284 slc33a1 (ENSAPOG00000014524) rps6kb1b (ENSAPOG00000014469) tubd1 (ENSAPOG00000014374) vmp1 (ENSAPOG00000014312) ENSAPOG00000014237 ATM (ENSAPOG00000014196) TMPRSS2 (ENSAPOG00000013509) bace2 (ENSAPOG00000013476) DSCAM (ENSAPOG00000013397) PCP4 (ENSAPOG00000013232) sh3bgr (ENSAPOG00000013215) GET1 (ENSAPOG00000013162) ENSAPOG00000013130 ##22 MIPEP (ENSAPOG00000013090) tnfrsf19 (ENSAPOG00000012968) SACS (ENSAPOG00000012936) sgcg (ENSAPOG00000012872) Cichlidae ANCESTRAL SPECIES 25 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00940000172904 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01030000235087 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174.e ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Midas cichlid MODERN SPECIES 1082 ENSACIG00000012494 gmps (ENSACIG00000012452) slc33a1 (ENSACIG00000012418) rps6kb1b (ENSACIG00000012381) ENSACIG00000012364 tubd1 (ENSACIG00000012321) vmp1 (ENSACIG00000012291) ENSACIG00000012273 ENSACIG00000012260 ENSACIG00000012252 bace2 (ENSACIG00000012213) DSCAM (ENSACIG00000012139) ENSACIG00000012122 sh3bgr (ENSACIG00000012110) get1 (ENSACIG00000012099) ENSACIG00000012030 ##22 MIPEP (ENSACIG00000011826) tnfrsf19 (ENSACIG00000011787) Pseudocrenilabrinae ANCESTRAL SPECIES 22 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00940000172904 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01030000235087 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174.e ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Nile tilapia MODERN SPECIES 5 KCNAB1 (ENSONIG00000005523) ENSONIG00000005521 gmps (ENSONIG00000005518) slc33a1 (ENSONIG00000005517) rps6kb1b (ENSONIG00000005515) tubd1 (ENSONIG00000005513) vmp1 (ENSONIG00000005506) ENSONIG00000005503 ATM (ENSONIG00000005496) bace2 (ENSONIG00000005485) DSCAM (ENSONIG00000005472) ENSONIG00000028558 ENSONIG00000032616 sh3bgr (ENSONIG00000039028) WRB (ENSONIG00000005465) BRWD1 (ENSONIG00000005455) ##22 MIPEP (ENSONIG00000005451) tnfrsf19 (ENSONIG00000005447) SACS (ENSONIG00000005444) sgcg (ENSONIG00000005441) rps25 (ENSONIG00000005440) trappc4 (ENSONIG00000005436) slc37a4a (ENSONIG00000005432) cfap45 (ENSONIG00000005430) cltcb (ENSONIG00000005419) VASP (ENSONIG00000005407) snrpd2 (ENSONIG00000042301) ENSONIG00000005405 pglyrp5 (ENSONIG00000028864) polr2i (ENSONIG00000005397) ENSONIG00000041079 Pseudocrenilabrinae_A ANCESTRAL SPECIES 25 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00940000172904 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01030000236803 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174.e ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 357 ENSNBRG00000001977 gmps (ENSNBRG00000001913) slc33a1 (ENSNBRG00000001875) rps6kb1b (ENSNBRG00000001797) tubd1 (ENSNBRG00000001764) vmp1 (ENSNBRG00000001690) ENSNBRG00000001584 ENSNBRG00000001564 ENSNBRG00000001548 bace2 (ENSNBRG00000001509) DSCAM (ENSNBRG00000001377) ENSNBRG00000001365 sh3bgr (ENSNBRG00000001356) GET1 (ENSNBRG00000001335) ENSNBRG00000001325 ##22 ENSNBRG00000001310 ##22 MIPEP (ENSNBRG00000001216) tnfrsf19 (ENSNBRG00000001209) SACS (ENSNBRG00000001180) sgcg (ENSNBRG00000001171) rps25 (ENSNBRG00000001154) trappc4 (ENSNBRG00000001122) slc37a4a (ENSNBRG00000001090) cfap45 (ENSNBRG00000001005) cltcb (ENSNBRG00000000842) ENSNBRG00000000820 snrpd2 (ENSNBRG00000000805) ENSNBRG00000000800 pglyrp5 (ENSNBRG00000000748) polr2i (ENSNBRG00000000723) ENSNBRG00000000700 Lyretail cichlid MODERN SPECIES 357 kcnab1a (ENSNBRG00000002042) ENSNBRG00000001977 gmps (ENSNBRG00000001913) slc33a1 (ENSNBRG00000001875) rps6kb1b (ENSNBRG00000001797) tubd1 (ENSNBRG00000001764) vmp1 (ENSNBRG00000001690) ENSNBRG00000001584 ENSNBRG00000001564 ENSNBRG00000001548 bace2 (ENSNBRG00000001509) DSCAM (ENSNBRG00000001377) ENSNBRG00000001365 sh3bgr (ENSNBRG00000001356) GET1 (ENSNBRG00000001335) ENSNBRG00000001325 ##22 ENSNBRG00000001310 ##22 MIPEP (ENSNBRG00000001216) tnfrsf19 (ENSNBRG00000001209) SACS (ENSNBRG00000001180) sgcg (ENSNBRG00000001171) rps25 (ENSNBRG00000001154) trappc4 (ENSNBRG00000001122) slc37a4a (ENSNBRG00000001090) cfap45 (ENSNBRG00000001005) cltcb (ENSNBRG00000000842) ENSNBRG00000000820 snrpd2 (ENSNBRG00000000805) ENSNBRG00000000800 pglyrp5 (ENSNBRG00000000748) polr2i (ENSNBRG00000000723) Haplochromini ANCESTRAL SPECIES 33 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00940000172904 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01030000236803 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174.e ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Burton s mouthbrooder MODERN SPECIES 355 DSCAM (ENSHBUG00000003417) ENSHBUG00000003427 SH3BGR (ENSHBUG00000003472) ENSHBUG00000003507 GET1 (ENSHBUG00000003533) BRWD1 (ENSHBUG00000003712) ##22 MIPEP (ENSHBUG00000003792) TNFRSF19 (ENSHBUG00000003803) SACS (ENSHBUG00000003826) sgcg (ENSHBUG00000003840) rps25 (ENSHBUG00000003855) trappc4 (ENSHBUG00000000092) slc37a4a (ENSHBUG00000003894) cfap45 (ENSHBUG00000003980) cltcb (ENSHBUG00000004050) ENSHBUG00000004063 snrpd2 (ENSHBUG00000004073) ENSHBUG00000004079 pglyrp5 (ENSHBUG00000004120) polr2i (ENSHBUG00000004140) ENSHBUG00000004156 Haplochromini_A ANCESTRAL SPECIES 20 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00940000172904 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01030000236803 ENSGT00940000159847 ENSGT00940000156017.fb #20 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174.e ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 P. nyererei MODERN SPECIES 298 ENSPNYG00000010752 gmps (ENSPNYG00000010788) slc33a1 (ENSPNYG00000010862) rps6kb1b (ENSPNYG00000010910) ENSPNYG00000010930 tubd1 (ENSPNYG00000010942) vmp1 (ENSPNYG00000010976) ENSPNYG00000011010 ENSPNYG00000011035 ATM (ENSPNYG00000011075) bace2 (ENSPNYG00000011236) DSCAM (ENSPNYG00000011266) ENSPNYG00000011328 sh3bgr (ENSPNYG00000011342) GET1 (ENSPNYG00000011363) BRWD1 (ENSPNYG00000011393) ##22 MIPEP (ENSPNYG00000011479) TNFRSF19 (ENSPNYG00000011535) SACS (ENSPNYG00000011559) sgcg (ENSPNYG00000011599) rps25 (ENSPNYG00000011614) trappc4 (ENSPNYG00000011626) slc37a4a (ENSPNYG00000011642) cfap45 (ENSPNYG00000011669) cltcb (ENSPNYG00000011737) ENSPNYG00000011797 ENSPNYG00000011815 snrpd2 (ENSPNYG00000011826) ENSPNYG00000011839 pglyrp5 (ENSPNYG00000011859) polr2i (ENSPNYG00000011908) Haplochromini_B ANCESTRAL SPECIES 9 ENSGT00940000156760.f ENSGT00940000160473 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT01030000236803 ENSGT00940000156017.fb #20 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174.e ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Eastern happy MODERN SPECIES 5 slc33a1 (ENSACLG00000003045) rps6kb1b (ENSACLG00000002988) tubd1 (ENSACLG00000002918) vmp1 (ENSACLG00000002866) ENSACLG00000002815 ENSACLG00000002780 ENSACLG00000002762 ENSACLG00000002745 bace2 (ENSACLG00000002738) DSCAM (ENSACLG00000002566) PCP4 (ENSACLG00000002377) ENSACLG00000002366 ENSACLG00000002318 #20 ENSACLG00000002305 GET1 (ENSACLG00000002274) BRWD1 (ENSACLG00000002135) ##22 MIPEP (ENSACLG00000002037) TNFRSF19 (ENSACLG00000002019) SACS (ENSACLG00000001990) sgcg (ENSACLG00000001962) rps25 (ENSACLG00000001937) trappc4 (ENSACLG00000001923) slc37a4a (ENSACLG00000001899) cfap45 (ENSACLG00000001879) cltcb (ENSACLG00000001802) ENSACLG00000001786 VASP (ENSACLG00000001772) snrpd2 (ENSACLG00000001746) ENSACLG00000001738 pglyrp5 (ENSACLG00000001693) polr2i (ENSACLG00000001663) Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 1096 ENSMZEG00005012387 ENSMZEG00005012408 ENSMZEG00005012426 bace2 (ENSMZEG00005012442) ENSMZEG00005012458 ENSMZEG00005012462 bace2 (ENSMZEG00005012481) ENSMZEG00005012501 ENSMZEG00005012508 ENSMZEG00005012519 DSCAM (ENSMZEG00005012544) ENSMZEG00005012605 ENSMZEG00005012643 #20 get1 (ENSMZEG00005012689) ENSMZEG00005012702 ##22 ENSMZEG00005012720 ##22 MIPEP (ENSMZEG00005012738) TNFRSF19 (ENSMZEG00005012781) SACS (ENSMZEG00005012799) sgcg (ENSMZEG00005012814) rps25 (ENSMZEG00005012840) trappc4 (ENSMZEG00005012853) slc37a4a (ENSMZEG00005012872) cfap45 (ENSMZEG00005012892) cltcb (ENSMZEG00005012942) ENSMZEG00005013032 ENSMZEG00005013046 snrpd2 (ENSMZEG00005013054) ENSMZEG00005013061 pglyrp5 (ENSMZEG00005013071) polr2i (ENSMZEG00005013082) Zebra mbuna MODERN SPECIES 1096 vmp1 (ENSMZEG00005012351) ENSMZEG00005012387 ENSMZEG00005012408 ENSMZEG00005012426 bace2 (ENSMZEG00005012442) ENSMZEG00005012458 ENSMZEG00005012462 bace2 (ENSMZEG00005012481) ENSMZEG00005012501 ENSMZEG00005012508 ENSMZEG00005012519 DSCAM (ENSMZEG00005012544) ENSMZEG00005012605 ENSMZEG00005012643 #20 get1 (ENSMZEG00005012689) ENSMZEG00005012702 ##22 ENSMZEG00005012720 ##22 MIPEP (ENSMZEG00005012738) TNFRSF19 (ENSMZEG00005012781) SACS (ENSMZEG00005012799) sgcg (ENSMZEG00005012814) rps25 (ENSMZEG00005012840) trappc4 (ENSMZEG00005012853) slc37a4a (ENSMZEG00005012872) cfap45 (ENSMZEG00005012892) cltcb (ENSMZEG00005012942) ENSMZEG00005013032 ENSMZEG00005013046 snrpd2 (ENSMZEG00005013054) ENSMZEG00005013061 pglyrp5 (ENSMZEG00005013071) Percomorphaceae_C ANCESTRAL SPECIES 9 ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00940000172904 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01030000235087 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00980000203400 ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00940000177608 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 Eupercaria ANCESTRAL SPECIES 7 ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00940000172904 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01030000235087 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000181074 Tetraodontidae ANCESTRAL SPECIES ENSGT00950000183107.a.b.a ##22 Tetraodon MODERN SPECIES 26 ENSTNIG00000011246 ENSTNIG00000011247 ENSTNIG00000011248 ENSTNIG00000011249 TMEM184C (ENSTNIG00000011250) ednrab (ENSTNIG00000011251) slc10a7 (ENSTNIG00000011252) ENSTNIG00000003530 ENSTNIG00000003531 bace2 (ENSTNIG00000003532) DSCAM (ENSTNIG00000004972) ENSTNIG00000004971 sh3bgr (ENSTNIG00000004970) get1 (ENSTNIG00000004969) ENSTNIG00000004968 ENSTNIG00000004967 ##22 MIPEP (ENSTNIG00000004966) ENSTNIG00000004965 tnfrsf19 (ENSTNIG00000004964) SACS (ENSTNIG00000011728) sgcg (ENSTNIG00000011729) sgcg (ENSTNIG00000001397) ENSTNIG00000011730 trappc4 (ENSTNIG00000011731) slc37a4a (ENSTNIG00000011732) cfap45 (ENSTNIG00000011733) cltcb (ENSTNIG00000011734) VASP (ENSTNIG00000011735) snrpd2 (ENSTNIG00000011736) ENSTNIG00000000594 pglyrp5 (ENSTNIG00000000873) Eupecaria_A ANCESTRAL SPECIES 9 ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00940000172904 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01030000235087 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000181074 Eupecaria_B ANCESTRAL SPECIES 9 ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00940000172904 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01030000235087 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000181074 Perciformes ANCESTRAL SPECIES 10 ENSGT00940000155062.b.d.a ENSGT00940000154203 ENSGT00940000157069 ENSGT00390000007230.b ENSGT00940000172904 ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT01030000235087 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000181074 Cottioidei ANCESTRAL SPECIES 4 ENSGT00940000154203 ENSGT00940000157069 ENSGT00390000007230.b ENSGT00940000172904 ENSGT00390000012388 ENSGT00670000098061 ENSGT01030000236977 ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT01030000235087 ENSGT00940000165615.b ENSGT00940000156017.fb #20 ENSGT00390000008610.a.b.a.a.b ENSGT00940000159847 ENSGT00940000165905 ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000160678.a ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Lumpfish MODERN SPECIES 4 gmps (ENSCLMG00005001830) slc33a1 (ENSCLMG00005002225) rps6kb1b (ENSCLMG00005002261) tubd1 (ENSCLMG00005004241) vmp1 (ENSCLMG00005004248) ENSCLMG00005004360 ATM (ENSCLMG00005004417) ENSCLMG00005004592 bace2 (ENSCLMG00005004602) DSCAM (ENSCLMG00005004757) ENSCLMG00005005171 ENSCLMG00005005173 sh3bgr (ENSCLMG00005005175) ENSCLMG00005005176 get1 (ENSCLMG00005005177) ENSCLMG00005005199 ##22 MIPEP (ENSCLMG00005008099) tnfrsf19 (ENSCLMG00005009631) ENSCLMG00005009632 sgcg (ENSCLMG00005009633) rps25 (ENSCLMG00005009636) trappc4 (ENSCLMG00005009638) slc37a4a (ENSCLMG00005009642) cfap45 (ENSCLMG00005009643) cltcb (ENSCLMG00005009669) VASP (ENSCLMG00005012654) snrpd2 (ENSCLMG00005012655) ENSCLMG00005012662 pglyrp5 (ENSCLMG00005012664) polr2i (ENSCLMG00005012665) ENSCLMG00005012666 Perciformes_a ANCESTRAL SPECIES 9 ENSGT00940000154203 ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000159847 ENSGT01030000235087 ENSGT00940000165615.b ENSGT00940000156017.fb #20 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000181074 Channel bull blenny MODERN SPECIES 4 gmps (ENSCGOG00000006633) slc33a1 (ENSCGOG00000007409) rps6kb1b (ENSCGOG00000007441) tubd1 (ENSCGOG00000009591) vmp1 (ENSCGOG00000009611) ENSCGOG00000009762 ATM (ENSCGOG00000009803) ENSCGOG00000010186 ENSCGOG00000010187 bace2 (ENSCGOG00000010192) DSCAM (ENSCGOG00000010331) PCP4 (ENSCGOG00000010510) sh3bgr (ENSCGOG00000010512) ENSCGOG00000010514 get1 (ENSCGOG00000010518) BRWD1 (ENSCGOG00000010580) ##22 MIPEP (ENSCGOG00000011811) tnfrsf19 (ENSCGOG00000013459) ENSCGOG00000013463 sgcg (ENSCGOG00000013466) rps25 (ENSCGOG00000013486) trappc4 (ENSCGOG00000013493) slc37a4a (ENSCGOG00000013554) cfap45 (ENSCGOG00000013714) cltcb (ENSCGOG00000013796) ENSCGOG00000015730 snrpd2 (ENSCGOG00000015737) ENSCGOG00000015749 pglyrp5 (ENSCGOG00000015771) polr2i (ENSCGOG00000015751) ENSCGOG00000015772 Pike perch MODERN SPECIES 86 gmps (ENSSLUG00000020209) slc33a1 (ENSSLUG00000020198) RPS6KB1 (ENSSLUG00000020145) tubd1 (ENSSLUG00000020130) vmp1 (ENSSLUG00000020129) ENSSLUG00000020122 ATM (ENSSLUG00000020095) TMPRSS2 (ENSSLUG00000020078) bace2 (ENSSLUG00000020071) DSCAM (ENSSLUG00000020065) ENSSLUG00000020063 ENSSLUG00000020060 SH3BGRL (ENSSLUG00000020052) #20 ENSSLUG00000020046 GET1 (ENSSLUG00000020040) BRWD1 (ENSSLUG00000015979) ##22 MIPEP (ENSSLUG00000015474) tnfrsf19 (ENSSLUG00000015420) ENSSLUG00000015394 sgcg (ENSSLUG00000015383) rps25 (ENSSLUG00000015373) trappc4 (ENSSLUG00000015317) slc37a4a (ENSSLUG00000015303) cfap45 (ENSSLUG00000015289) cltcb (ENSSLUG00000013439) ENSSLUG00000013299 snrpd2 (ENSSLUG00000013281) ENSSLUG00000013276 pglyrp5 (ENSSLUG00000013271) polr2i (ENSSLUG00000013267) ENSSLUG00000013263 Eupecaria_C ANCESTRAL SPECIES 7 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Eupercaria_incertae_sedis ANCESTRAL SPECIES 5 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 European seabass MODERN SPECIES 3 gmps (ENSDLAG00005000390) slc33a1 (ENSDLAG00005000369) rps6kb1b (ENSDLAG00005000265) ENSDLAG00005000199 vmp1 (ENSDLAG00005000095) ENSDLAG00005034756 ENSDLAG00005015958 ENSDLAG00005015906 bace2 (ENSDLAG00005015782) ENSDLAG00005015557 PCP4 (ENSDLAG00005034194) ENSDLAG00005015529 sh3bgr (ENSDLAG00005033194) ENSDLAG00005033085 GET1 (ENSDLAG00005028635) BRWD1 (ENSDLAG00005014292) ##22 MIPEP (ENSDLAG00005012227) TNFRSF19 (ENSDLAG00005012166) SACS (ENSDLAG00005012160) sgcg (ENSDLAG00005012152) RPS25 (ENSDLAG00005012136) trappc4 (ENSDLAG00005034726) slc37a4a (ENSDLAG00005026556) ENSDLAG00005012049 ENSDLAG00005011388 ENSDLAG00005011371 ENSDLAG00005011366 ENSDLAG00005026611 ENSDLAG00005011268 ENSDLAG00005011258 ENSDLAG00005011252 Large yellow croaker MODERN SPECIES 479 ENSLCRG00005019917 gmps (ENSLCRG00005019918) slc33a1 (ENSLCRG00005020034) rps6kb1b (ENSLCRG00005020043) tubd1 (ENSLCRG00005020200) vmp1 (ENSLCRG00005020202) ENSLCRG00005020210 ATM (ENSLCRG00005002491) ENSLCRG00005004478 bace2 (ENSLCRG00005004486) DSCAM (ENSLCRG00005004721) ENSLCRG00005006764 ENSLCRG00005006765 SH3BGRL (ENSLCRG00005006767) #20 GET1 (ENSLCRG00005006768) ENSLCRG00005006800 ##22 MIPEP (ENSLCRG00005009341) tnfrsf19 (ENSLCRG00005009394) SACS (ENSLCRG00005009399) sgcg (ENSLCRG00005009415) rps25 (ENSLCRG00005009418) trappc4 (ENSLCRG00005009421) slc37a4a (ENSLCRG00005009425) cfap45 (ENSLCRG00005009427) cltcb (ENSLCRG00005009451) ENSLCRG00005009893 ENSLCRG00005009895 snrpd2 (ENSLCRG00005009896) ENSLCRG00005009911 pglyrp5 (ENSLCRG00005009913) polr2i (ENSLCRG00005009916) Gilthead seabream MODERN SPECIES 11 gmps (ENSSAUG00010024081) slc33a1 (ENSSAUG00010024579) rps6kb1b (ENSSAUG00010024586) tubd1 (ENSSAUG00010024666) vmp1 (ENSSAUG00010024671) ENSSAUG00010024677 ATM (ENSSAUG00010024686) ENSSAUG00010004041 bace2 (ENSSAUG00010004045) DSCAM (ENSSAUG00010004746) PCP4 (ENSSAUG00010005428) ENSSAUG00010005429 sh3bgr (ENSSAUG00010005431) ENSSAUG00010005437 GET1 (ENSSAUG00010005439) BRWD1 (ENSSAUG00010005505) ##22 MIPEP (ENSSAUG00010007830) tnfrsf19 (ENSSAUG00010008977) ENSSAUG00010008979 ENSSAUG00010008981 ENSSAUG00010008982 sgcg (ENSSAUG00010008983) rps25 (ENSSAUG00010008984) trappc4 (ENSSAUG00010008988) slc37a4a (ENSSAUG00010008995) cfap45 (ENSSAUG00010008997) cltcb (ENSSAUG00010009002) ENSSAUG00010009034 snrpd2 (ENSSAUG00010009035) ENSSAUG00010009036 pglyrp5 (ENSSAUG00010009038) Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 187 ENSLBEG00000011623 gmps (ENSLBEG00000011676) slc33a1 (ENSLBEG00000011762) rps6kb1b (ENSLBEG00000011832) tubd1 (ENSLBEG00000011893) vmp1 (ENSLBEG00000011931) ENSLBEG00000011976 ATM (ENSLBEG00000012075) ENSLBEG00000012284 bace2 (ENSLBEG00000012380) DSCAM (ENSLBEG00000012440) PCP4 (ENSLBEG00000012516) sh3bgr (ENSLBEG00000012550) get1 (ENSLBEG00000012607) ENSLBEG00000012641 ##22 ENSLBEG00000012658 ##22 MIPEP (ENSLBEG00000012788) ENSLBEG00000012942 SACS (ENSLBEG00000012985) sgcg (ENSLBEG00000013026) rps25 (ENSLBEG00000013063) trappc4 (ENSLBEG00000013080) slc37a4a (ENSLBEG00000013109) slc37a4a (ENSLBEG00000013128) ENSLBEG00000013165 ENSLBEG00000013182 ENSLBEG00000013203 ENSLBEG00000013230 ENSLBEG00000013249 GAL3ST2 (ENSLBEG00000013282) kcnj13 (ENSLBEG00000013304) Ballan wrasse MODERN SPECIES 187 KCNAB1 (ENSLBEG00000011567) ENSLBEG00000011623 gmps (ENSLBEG00000011676) slc33a1 (ENSLBEG00000011762) rps6kb1b (ENSLBEG00000011832) tubd1 (ENSLBEG00000011893) vmp1 (ENSLBEG00000011931) ENSLBEG00000011976 ATM (ENSLBEG00000012075) ENSLBEG00000012284 bace2 (ENSLBEG00000012380) DSCAM (ENSLBEG00000012440) PCP4 (ENSLBEG00000012516) sh3bgr (ENSLBEG00000012550) get1 (ENSLBEG00000012607) ENSLBEG00000012641 ##22 ENSLBEG00000012658 ##22 MIPEP (ENSLBEG00000012788) ENSLBEG00000012942 SACS (ENSLBEG00000012985) sgcg (ENSLBEG00000013026) rps25 (ENSLBEG00000013063) trappc4 (ENSLBEG00000013080) slc37a4a (ENSLBEG00000013109) slc37a4a (ENSLBEG00000013128) ENSLBEG00000013165 ENSLBEG00000013182 ENSLBEG00000013203 ENSLBEG00000013230 ENSLBEG00000013249 GAL3ST2 (ENSLBEG00000013282) Percomorphaceae_D ANCESTRAL SPECIES 9 ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000156017.fb #20 ENSGT00940000165905 ENSGT01030000235087 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00980000203400 ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00940000177608 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 Anabantaria ANCESTRAL SPECIES 9 ENSGT00940000160473 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00940000164489 ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00980000203400 ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Anabantoidei ANCESTRAL SPECIES 14 ENSGT00940000156760.f ENSGT00940000160473 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 ENSGT01100000263564.a Climbing perch MODERN SPECIES 4 kcnab1a (ENSATEG00000002685) ENSATEG00000002487 gmps (ENSATEG00000002414) slc33a1 (ENSATEG00000002379) rps6kb1b (ENSATEG00000002322) ENSATEG00000002282 vmp1 (ENSATEG00000002271) ENSATEG00000002259 ENSATEG00000001745 bace2 (ENSATEG00000001688) ENSATEG00000001528 PCP4 (ENSATEG00000030128) ENSATEG00000025365 sh3bgr (ENSATEG00000027004) ENSATEG00000001447 BRWD1 (ENSATEG00000025243) ##22 MIPEP (ENSATEG00000001402) TNFRSF19 (ENSATEG00000001369) SACS (ENSATEG00000001324) sgcg (ENSATEG00000001297) RPS25 (ENSATEG00000001289) trappc4 (ENSATEG00000001260) slc37a4a (ENSATEG00000001221) ENSATEG00000001151 ENSATEG00000001007 ENSATEG00000027800 snrpd2 (ENSATEG00000000868) ENSATEG00000000862 pglyrp5 (ENSATEG00000000796) polr2i (ENSATEG00000000758) ENSATEG00000000708 Siamese fighting fish MODERN SPECIES 4 TIPARP (ENSBSLG00000023451) ssr3 (ENSBSLG00000023464) KCNAB1 (ENSBSLG00000023499) gmps (ENSBSLG00000023613) slc33a1 (ENSBSLG00000023790) rps6kb1b (ENSBSLG00000023815) tubd1 (ENSBSLG00000024370) vmp1 (ENSBSLG00000024375) ENSBSLG00000024388 ATM (ENSBSLG00000024399) bace2 (ENSBSLG00000024512) DSCAM (ENSBSLG00000024564) PCP4 (ENSBSLG00000024632) sh3bgr (ENSBSLG00000024644) GET1 (ENSBSLG00000024662) BRWD1 (ENSBSLG00000024719) ##22 MIPEP (ENSBSLG00000025221) tnfrsf19 (ENSBSLG00000002236) SACS (ENSBSLG00000002286) sgcg (ENSBSLG00000002399) rps25 (ENSBSLG00000002417) trappc4 (ENSBSLG00000002446) slc37a4a (ENSBSLG00000002519) cltcb (ENSBSLG00000002679) ENSBSLG00000003018 snrpd2 (ENSBSLG00000003632) ENSBSLG00000003656 pglyrp5 (ENSBSLG00000003754) polr2i (ENSBSLG00000003807) ENSBSLG00000003819 ENSBSLG00000003825 Zig-zag eel MODERN SPECIES 4 ENSMAMG00000013187 ENSMAMG00000013166 ENSMAMG00000026409 ENSMAMG00000013296 ENSMAMG00000013313 ENSMAMG00000013343 ENSMAMG00000013361 cbln20 (ENSMAMG00000024574) ENSMAMG00000013392 tagln (ENSMAMG00000013401) pcsk7 (ENSMAMG00000013424) BACE1 (ENSMAMG00000013436) ENSMAMG00000013469 ENSMAMG00000026518 ENSMAMG00000013492 ENSMAMG00000013515 ##22 MIPEP (ENSMAMG00000013547) TNFRSF19 (ENSMAMG00000013571) ENSMAMG00000027045 SACS (ENSMAMG00000013583) sgcg (ENSMAMG00000013624) RPS25 (ENSMAMG00000013655) trappc4 (ENSMAMG00000013672) slc37a4a (ENSMAMG00000013683) ENSMAMG00000013725 ENSMAMG00000013799 ENSMAMG00000013883 snrpd2 (ENSMAMG00000026288) ENSMAMG00000013946 pglyrp5 (ENSMAMG00000013962) polr2i (ENSMAMG00000013970) Carangaria ANCESTRAL SPECIES 8 ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000156017.fb #20 ENSGT00940000165905 ENSGT01030000235087 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00940000177608 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 Carangaria_A ANCESTRAL SPECIES 10 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00940000156017.fb #20 ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b Seriola ANCESTRAL SPECIES 107 ENSGT00940000160473 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000165615.b ENSGT00940000156017.fb #20 ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b Greater amberjack MODERN SPECIES 263 ENSSDUG00000012007 gmps (ENSSDUG00000011961) slc33a1 (ENSSDUG00000011921) rps6kb1b (ENSSDUG00000011826) tubd1 (ENSSDUG00000011791) vmp1 (ENSSDUG00000011759) ENSSDUG00000011642 ATM (ENSSDUG00000011432) ENSSDUG00000011401 bace2 (ENSSDUG00000011375) DSCAM (ENSSDUG00000011324) PCP4 (ENSSDUG00000011309) SH3BGRL (ENSSDUG00000011284) #20 GET1 (ENSSDUG00000011276) ENSSDUG00000011259 BRWD1 (ENSSDUG00000011194) ##22 MIPEP (ENSSDUG00000011133) tnfrsf19 (ENSSDUG00000011111) Yellowtail amberjack MODERN SPECIES 2709 slc33a1 (ENSSLDG00000017409) rps6kb1b (ENSSLDG00000017438) tubd1 (ENSSLDG00000017471) vmp1 (ENSSLDG00000017538) ENSSLDG00000017549 ENSSLDG00000017562 ATM (ENSSLDG00000017590) ENSSLDG00000017743 bace2 (ENSSLDG00000017766) DSCAM (ENSSLDG00000017857) PCP4 (ENSSLDG00000017984) ENSSLDG00000017997 SH3BGRL (ENSSLDG00000018039) #20 GET1 (ENSSLDG00000018117) ENSSLDG00000018131 ENSSLDG00000018147 ##22 MIPEP (ENSSLDG00000018219) tnfrsf19 (ENSSLDG00000018296) Barramundi perch MODERN SPECIES 311 ENSLCAG00010006762 ENSLCAG00010006770 gmps (ENSLCAG00010006816) slc33a1 (ENSLCAG00010006951) rps6kb1b (ENSLCAG00010006981) tubd1 (ENSLCAG00010007190) vmp1 (ENSLCAG00010007207) ENSLCAG00010007223 TMPRSS2 (ENSLCAG00010007274) bace2 (ENSLCAG00010007279) DSCAM (ENSLCAG00010007372) ENSLCAG00010007764 ENSLCAG00010007770 sh3bgr (ENSLCAG00010007787) GET1 (ENSLCAG00010007806) BRWD1 (ENSLCAG00010008026) ##22 MIPEP (ENSLCAG00010008971) Pleuronectoidei ANCESTRAL SPECIES 13 ENSGT00940000155062.b.d.a ENSGT00940000157069 ENSGT00390000007230.b ENSGT00390000012388 ENSGT00670000098061 ENSGT00940000155207.a.b.i.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000156017.fb #20 ENSGT00940000165905 ENSGT01030000235087 ENSGT00940000165615.b ENSGT00940000159847 ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000183171.B ENSGT00940000153259.a.a.b ENSGT00390000016695 ENSGT00940000159187 ENSGT00390000004856 ENSGT00940000153761.B ENSGT00730000111086 ENSGT00730000111174 ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000156765.a.a ENSGT00390000017608.l ENSGT00940000167604 ENSGT00940000161006 ENSGT00550000075063 ENSGT00940000175519 Turbot MODERN SPECIES 15 ENSSMAG00000004233 aamdc (ENSSMAG00000025950) ENSSMAG00000004204 rps6kb1b (ENSSMAG00000004157) ENSSMAG00000004126 vmp1 (ENSSMAG00000004088) ENSSMAG00000004072 ENSSMAG00000003979 ENSSMAG00000003958 bace2 (ENSSMAG00000003934) ENSSMAG00000003813 ENSSMAG00000003801 ENSSMAG00000003771 sh3bgr (ENSSMAG00000025337) ENSSMAG00000003726 BRWD1 (ENSSMAG00000033221) ##22 MIPEP (ENSSMAG00000003706) ENSSMAG00000035276 ENSSMAG00000023732 TNFRSF19 (ENSSMAG00000003699) SACS (ENSSMAG00000003674) sgcg (ENSSMAG00000003664) RPS25 (ENSSMAG00000003657) trappc4 (ENSSMAG00000021819) slc37a4a (ENSSMAG00000003612) ENSSMAG00000003584 ENSSMAG00000003454 ENSSMAG00000003441 snrpd2 (ENSSMAG00000003422) ENSSMAG00000003414 pglyrp5 (ENSSMAG00000003368) Tongue sole DUPLICATION Tongue sole MODERN SPECIES 14 ENSCSEG00000001836 gmps (ENSCSEG00000001844) slc33a1 (ENSCSEG00000001853) rps6kb1b (ENSCSEG00000001890) tubd1 (ENSCSEG00000001994) vmp1 (ENSCSEG00000001998) ENSCSEG00000002004 ATM (ENSCSEG00000002010) ENSCSEG00000002045 bace2 (ENSCSEG00000002049) DSCAM (ENSCSEG00000002056) PCP4 (ENSCSEG00000002068) ENSCSEG00000002075 #20 get1 (ENSCSEG00000002084) ENSCSEG00000002092 ##22 ENSCSEG00000002102 ##22 MIPEP (ENSCSEG00000002112) tnfrsf19 (ENSCSEG00000002123) ENSCSEG00000002124 smtla (ENSCSEG00000002132) KIRREL3 (ENSCSEG00000002142) BARX2 (ENSCSEG00000002154) rbm7 (ENSCSEG00000002160) ENSCSEG00000002168 ENSCSEG00000002179 GRAMD1B (ENSCSEG00000002184) ENSCSEG00000002202 C5AR1 (ENSCSEG00000002207) polr2i (ENSCSEG00000002213) ENSCSEG00000002221 pglyrp5 (ENSCSEG00000002225) Tongue sole MODERN SPECIES 14 kcnab1a (ENSCSEG00000001804) ENSCSEG00000001836 gmps (ENSCSEG00000001844) slc33a1 (ENSCSEG00000001853) rps6kb1b (ENSCSEG00000001890) tubd1 (ENSCSEG00000001994) vmp1 (ENSCSEG00000001998) ENSCSEG00000002004 ATM (ENSCSEG00000002010) ENSCSEG00000002045 bace2 (ENSCSEG00000002049) DSCAM (ENSCSEG00000002056) PCP4 (ENSCSEG00000002068) ENSCSEG00000002075 #20 get1 (ENSCSEG00000002084) ENSCSEG00000002092 ##22 ENSCSEG00000002102 ##22 MIPEP (ENSCSEG00000002112) tnfrsf19 (ENSCSEG00000002123) ENSCSEG00000002124 smtla (ENSCSEG00000002132) KIRREL3 (ENSCSEG00000002142) BARX2 (ENSCSEG00000002154) rbm7 (ENSCSEG00000002160) ENSCSEG00000002168 ENSCSEG00000002179 GRAMD1B (ENSCSEG00000002184) ENSCSEG00000002202 C5AR1 (ENSCSEG00000002207) polr2i (ENSCSEG00000002213) ENSCSEG00000002221 Sarcopterygii ANCESTRAL SPECIES 67 ENSGT00940000157890 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000164201 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Coelacanth MODERN SPECIES 1033 ENSLACG00000013973 SH3BGR (ENSLACG00000013667) LCA5L (ENSLACG00000013344) GET1 (ENSLACG00000022345) BRWD1 (ENSLACG00000011920) ##22 PSMG1 (ENSLACG00000011558) ETS2 (ENSLACG00000010068) ERG (ENSLACG00000003340) KCNJ15 (ENSLACG00000002317) Tetrapoda ANCESTRAL SPECIES 28 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Anura ANCESTRAL SPECIES 60 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.a ENSGT00940000155686.b ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT01090000260929 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00940000165905 ENSGT00950000182802.D ENSGT00950000185616 ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Frog MODERN SPECIES 2 dscam (ENSXETG00000033779) ENSXETG00000046142 ENSXETG00000038478 igsf5 (ENSXETG00000006124) b3galt5l (ENSXETG00000006123) ENSXETG00000006113 b3galt5.4 (ENSXETG00000044775) ENSXETG00000042777 b3galt5.3 (ENSXETG00000044184) b3galt5.2 (ENSXETG00000045829) ENSXETG00000047345 sh3bgr (ENSXETG00000042349) get1 (ENSXETG00000023739) hmgn1 (ENSXETG00000025097) ENSXETG00000040818 brwd1 (ENSXETG00000023728) ##22 psmg1 (ENSXETG00000023735) ets2 (ENSXETG00000023724) erg (ENSXETG00000023717) kcnj15 (ENSXETG00000023556) ENSXETG00000039779 dyrk1a (ENSXETG00000013037) KCNJ6 (ENSXETG00000049042) vps26c (ENSXETG00000013035) ttc3 (ENSXETG00000032375) pigp (ENSXETG00000038791) ripply3 (ENSXETG00000013030) hlcs (ENSXETG00000013028) sim2 (ENSXETG00000013022) cldn14 (ENSXETG00000013019) chaf1b (ENSXETG00000013014) Leishan spiny toad MODERN SPECIES 5 FAM3B (ENSLLEG00000003471) ENSLLEG00000003513 BACE2 (ENSLLEG00000003527) ENSLLEG00000003550 DSCAM (ENSLLEG00000003644) ENSLLEG00000003783 ENSLLEG00000003788 ENSLLEG00000003795 ENSLLEG00000003809 ENSLLEG00000003815 SH3BGR (ENSLLEG00000003820) ENSLLEG00000004876 ENSLLEG00000004920 ENSLLEG00000004942 ENSLLEG00000004967 BRWD1 (ENSLLEG00000005021) ##22 PSMG1 (ENSLLEG00000005143) ETS2 (ENSLLEG00000005173) ENSLLEG00000005201 ENSLLEG00000005212 ERG (ENSLLEG00000005244) KCNJ15 (ENSLLEG00000005430) ENSLLEG00000005458 KCNJ6 (ENSLLEG00000005482) DYRK1A (ENSLLEG00000005534) VPS26C (ENSLLEG00000005680) ENSLLEG00000005745 PIGP (ENSLLEG00000005797) RIPPLY3 (ENSLLEG00000005842) HLCS (ENSLLEG00000005886) SIM2 (ENSLLEG00000006059) Amniota ANCESTRAL SPECIES ENSGT00530000063764.a ENSGT00940000157890 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Mammalia ANCESTRAL SPECIES ENSGT00940000157890 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.D ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Platypus MODERN SPECIES 9 ZBTB21 (ENSOANG00000019605) ENSOANG00000006446 PRDM15 (ENSOANG00000006445) ENSOANG00000006444 RIPK4 (ENSOANG00000006443) TMPRSS2 (ENSOANG00000006438) ENSOANG00000006437 ENSOANG00000006433 DSCAM (ENSOANG00000006430) PCP4 (ENSOANG00000035160) ENSOANG00000006429 ENSOANG00000006428 SH3BGR (ENSOANG00000040703) GET1 (ENSOANG00000049347) ENSOANG00000040624 BRWD1 (ENSOANG00000006422) ##22 PSMG1 (ENSOANG00000006421) ETS2 (ENSOANG00000006420) ERG (ENSOANG00000006418) KCNJ15 (ENSOANG00000006416) KCNJ6 (ENSOANG00000006415) DYRK1A (ENSOANG00000006412) VPS26C (ENSOANG00000036069) ENSOANG00000006408 ENSOANG00000040733 ENSOANG00000006407 ENSOANG00000041345 HYI (ENSOANG00000006406) PTPRF (ENSOANG00000006400) KDM4A (ENSOANG00000006398) ST3GAL3 (ENSOANG00000051334) Theria ANCESTRAL SPECIES 1 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.D ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Marsupialia ANCESTRAL SPECIES 23 ENSGT00940000161028 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.D ENSGT00950000183107.a.b.a ##22 ENSGT00940000158923 ENSGT00940000156253 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002429 ENSGT00390000001844.a.a ENSGT00940000159353 ENSGT00940000157860 Marsupialia_b ANCESTRAL SPECIES 3 ENSGT00940000161028 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.D ENSGT00950000183107.a.b.a ##22 ENSGT00940000158923 ENSGT00940000156253 ENSGT00500000044950 ENSGT00950000182836.b.b.b.a.a ENSGT00390000011821.b ENSGT00940000154826 ENSGT00390000003874 ENSGT00390000011821.a ENSGT00390000008490 ENSGT00940000154989 ENSGT00940000160159 ENSGT00950000183152.B.c.a ENSGT00510000047027 ENSGT00940000159505 ENSGT00390000012196 Diprotodontia ANCESTRAL SPECIES 32 ENSGT00940000154829 ENSGT00940000161028 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00940000158923 ENSGT00940000156253 ENSGT00500000044950 ENSGT00950000182836.b.b.b.a.a ENSGT00390000011821.b ENSGT00940000154826 ENSGT00390000003874 ENSGT00390000011821.a ENSGT00390000008490 ENSGT00940000154989 ENSGT00940000160159 ENSGT00950000183152.B.c.a ENSGT00510000047027 ENSGT00940000159505 ENSGT00390000012196 Diprotodontia_a ANCESTRAL SPECIES 31 ENSGT00940000154829 ENSGT00940000161028 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000160964.i ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00940000158923 ENSGT00940000156253 ENSGT00500000044950 ENSGT00950000182836.b.b.b.a.a ENSGT00390000011821.b ENSGT00940000154826.bc ENSGT00390000003874 ENSGT00390000011821.a ENSGT00390000008490 ENSGT00940000154989 ENSGT00940000160159.a ENSGT00950000183152.B.c.a ENSGT00510000047027 ENSGT00940000159505 ENSGT00390000012196 koala MODERN SPECIES 249 DSCAM (ENSPCIG00000028291) PCP4 (ENSPCIG00000028281) ENSPCIG00000014298 ENSPCIG00000014296 SH3BGR (ENSPCIG00000028279) LCA5L (ENSPCIG00000028277) ENSPCIG00000028274 ENSPCIG00000033358 BRWD1 (ENSPCIG00000028266) ##22 BACH1 (ENSPCIG00000028263) GRIK1 (ENSPCIG00000028259) PSMG1 (ENSPCIG00000028255) ENSPCIG00000028254 ENSPCIG00000015523 ENSPCIG00000015522 PDXK (ENSPCIG00000015519) RRP1B (ENSPCIG00000015513) HSF2BP (ENSPCIG00000015503) SIK1 (ENSPCIG00000008860) ENSPCIG00000036347 ENSPCIG00000028100 U2AF1 (ENSPCIG00000028098) CBS (ENSPCIG00000028095) PKNOX1 (ENSPCIG00000007865) Common wonbat MODERN SPECIES 1120 ZBTB21 (ENSVURG00010020588) C2CD2 (ENSVURG00010020605) PRDM15 (ENSVURG00010020621) RIPK4 (ENSVURG00010020636) TMPRSS2 (ENSVURG00010020641) FAM3B (ENSVURG00010020723) BACE2 (ENSVURG00010020728) ENSVURG00010020735 DSCAM (ENSVURG00010020750) PCP4 (ENSVURG00010020798) ENSVURG00010020802 ENSVURG00010020804 SH3BGR (ENSVURG00010020806) LCA5L (ENSVURG00010020810) GET1 (ENSVURG00010020815) BRWD1 (ENSVURG00010020972) ##22 ENSVURG00010022806 BACH1 (ENSVURG00010022808) GRIK1 (ENSVURG00010022936) PSMG1 (ENSVURG00010023242) ENSVURG00010023246 ENSVURG00010023247 ENSVURG00010023249 PDXK (ENSVURG00010023250) ENSVURG00010023251 RRP1B (ENSVURG00010023255) HSF2BP (ENSVURG00010023259) ENSVURG00010023260 SIK1 (ENSVURG00010023263) ENSVURG00010023267 U2AF1 (ENSVURG00010023269) Wallaby MODERN SPECIES 9203 BRWD1 (ENSMEUG00000011520) ##22 Tasmanian devil MODERN SPECIES 2 ENSSHAG00000028405 USP25 (ENSSHAG00000006133) ENSSHAG00000005309 ENSSHAG00000023375 ENSSHAG00000002844 ENSSHAG00000001558 TMPRSS2 (ENSSHAG00000004952) BACE2 (ENSSHAG00000005092) DSCAM (ENSSHAG00000009089) PCP4 (ENSSHAG00000010796) B3GALT5 (ENSSHAG00000026882) SH3BGR (ENSSHAG00000004155) LCA5L (ENSSHAG00000002464) GET1 (ENSSHAG00000024410) ENSSHAG00000032232 ENSSHAG00000002554 ##22 ENSSHAG00000006419 ENSSHAG00000006972 ENSSHAG00000008206 ENSSHAG00000008796 ENSSHAG00000010304 CSTB (ENSSHAG00000025634) PDXK (ENSSHAG00000017888) RRP1B (ENSSHAG00000017789) HSF2BP (ENSSHAG00000017635) SIK1 (ENSSHAG00000017494) CRYAA (ENSSHAG00000017366) U2AF1 (ENSSHAG00000017185) CBS (ENSSHAG00000017100) PKNOX1 (ENSSHAG00000016846) ENSSHAG00000026320 Opossum MODERN SPECIES 3 ENSMODG00000020954 ENSMODG00000037980 PRDM15 (ENSMODG00000020959) ENSMODG00000044893 RIPK4 (ENSMODG00000020960) TMPRSS2 (ENSMODG00000020961) FAM3B (ENSMODG00000020962) BACE2 (ENSMODG00000020963) DSCAM (ENSMODG00000020965) PCP4 (ENSMODG00000020967) B3GALT5 (ENSMODG00000038204) SH3BGR (ENSMODG00000020969) LCA5L (ENSMODG00000020970) WRB (ENSMODG00000040658) ENSMODG00000020972 BRWD1 (ENSMODG00000020973) ##22 ENSMODG00000020974 ENSMODG00000020976 GRIK1 (ENSMODG00000020977) PSMG1 (ENSMODG00000043453) ETS2 (ENSMODG00000020979) ERG (ENSMODG00000020980) KCNJ15 (ENSMODG00000025413) KCNJ6 (ENSMODG00000020981) DYRK1A (ENSMODG00000020982) VPS26C (ENSMODG00000020983) ENSMODG00000020986 ENSMODG00000047973 PIGP (ENSMODG00000044070) C21orf91 (ENSMODG00000046101) CHODL (ENSMODG00000037721) Eutheria ANCESTRAL SPECIES 5 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00390000011549 ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00390000011549 ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183107.a.b.a ##22 Common shrew MODERN SPECIES 6072 ENSSARG00000007128 ##22 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.bb ENSGT00390000011549 ENSGT00940000164489 ENSGT00950000182802.A.ab.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00950000185378 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 Artiodactyla ANCESTRAL SPECIES 2 ENSGT00940000163441.f.a.b ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.a.a.a.a.a ENSGT00950000182802.A.ab.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00950000185378 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 Suina ANCESTRAL SPECIES 35 ENSGT00940000163441.f.a.b ENSGT00940000163441.f.a.a.b ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.a.a.a.a.b.a ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Chacoan peccary MODERN SPECIES 99 ENSCWAG00000012213 TMPRSS2 (ENSCWAG00000012074) MX1 (ENSCWAG00000011993) MX2 (ENSCWAG00000011842) FAM3B (ENSCWAG00000011663) BACE2 (ENSCWAG00000011510) DSCAM (ENSCWAG00000011010) PCP4 (ENSCWAG00000010963) ENSCWAG00000010918 B3GALT5 (ENSCWAG00000010904) SH3BGR (ENSCWAG00000010866) ENSCWAG00000010819 ENSCWAG00000010801 ENSCWAG00000010782 ENSCWAG00000010747 BRWD1 (ENSCWAG00000010679) ##22 PSMG1 (ENSCWAG00000010601) ETS2 (ENSCWAG00000010529) ERG (ENSCWAG00000009993) KCNJ15 (ENSCWAG00000009886) KCNJ6 (ENSCWAG00000009839) DYRK1A (ENSCWAG00000009765) VPS26C (ENSCWAG00000009347) TTC3 (ENSCWAG00000008763) PIGP (ENSCWAG00000008564) RIPPLY3 (ENSCWAG00000008511) HLCS (ENSCWAG00000008482) SIM2 (ENSCWAG00000008373) CLDN14 (ENSCWAG00000008352) CHAF1B (ENSCWAG00000008229) MORC3 (ENSCWAG00000008171) Pig MODERN SPECIES 4 TMPRSS2 (ENSSSCG00000024336) MX1 (ENSSSCG00000012077) MX2 (ENSSSCG00000012076) FAM3B (ENSSSCG00000012075) ENSSSCG00000012074 DSCAM (ENSSSCG00000012072) PCP4 (ENSSSCG00000037110) ENSSSCG00000012071 ENSSSCG00000038056 ENSSSCG00000050754 SH3BGR (ENSSSCG00000029219) LCA5L (ENSSSCG00000028122) GET1 (ENSSSCG00000037381) ENSSSCG00000051671 ENSSSCG00000033733 BRWD1 (ENSSSCG00000021042) ##22 PSMG1 (ENSSSCG00000062206) ETS2 (ENSSSCG00000038948) ERG (ENSSSCG00000022318) KCNJ15 (ENSSSCG00000012066) KCNJ6 (ENSSSCG00000012065) DYRK1A (ENSSSCG00000030480) VPS26C (ENSSSCG00000012063) TTC3 (ENSSSCG00000012062) PIGP (ENSSSCG00000012061) HLCS (ENSSSCG00000012059) SIM2 (ENSSSCG00000027179) CLDN14 (ENSSSCG00000020680) CHAF1B (ENSSSCG00000012056) MORC3 (ENSSSCG00000012055) DOP1B (ENSSSCG00000012054) Artiodactyla_a ANCESTRAL SPECIES 8 ENSGT00940000163441.f.a.b.c.a.b ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.a.a.a.a.a ENSGT00950000182802.A.ab.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00950000185378 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 Camelidae ANCESTRAL SPECIES ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.a.a.a.a.a ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Alpaca MODERN SPECIES 2363 BRWD1 (ENSVPAG00000006674) ##22 PSMG1 (ENSVPAG00000006673) Arabian camel MODERN SPECIES ENSCDRG00005009289 ENSCDRG00005009225 ENSCDRG00005009188 ENSCDRG00005009009 FAM3B (ENSCDRG00005008840) BACE2 (ENSCDRG00005008744) DSCAM (ENSCDRG00005008610) PCP4 (ENSCDRG00005008560) ENSCDRG00005008490 B3GALT5 (ENSCDRG00005008464) ENSCDRG00005008380 LCA5L (ENSCDRG00005008281) GET1 (ENSCDRG00005008195) ENSCDRG00005008082 ENSCDRG00005008049 BRWD1 (ENSCDRG00005007896) ##22 PSMG1 (ENSCDRG00005007842) ETS2 (ENSCDRG00005007775) ERG (ENSCDRG00005007389) KCNJ15 (ENSCDRG00005007361) KCNJ6 (ENSCDRG00005007336) DYRK1A (ENSCDRG00005007271) VPS26C (ENSCDRG00005006994) TTC3 (ENSCDRG00005006786) ENSCDRG00005006635 RIPPLY3 (ENSCDRG00005006597) HLCS (ENSCDRG00005006543) SIM2 (ENSCDRG00005006306) CLDN14 (ENSCDRG00005003192) CHAF1B (ENSCDRG00005003178) MORC3 (ENSCDRG00005003156) Artiodactyla_b ANCESTRAL SPECIES 6 ENSGT00940000163441.f.a.b.c.a.b ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.a.a.a.a.a ENSGT00950000182802.A.ab.b.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00950000185378 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 Cetacea ANCESTRAL SPECIES 10 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.a.a.a.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429.a.a ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00390000005732.h.b ENSGT00550000074968 Odontoceti ANCESTRAL SPECIES 9 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.a.a.a.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429.a.a ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00390000005732.h.b ENSGT00550000074968 Odontoceti_a ANCESTRAL SPECIES 8 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.a.a.a.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b.c ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429.a.a ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00390000005732.h.b ENSGT00550000074968 Odontoceti_b ANCESTRAL SPECIES 9 ENSGT00940000159953.A ENSGT00950000182802.A.ab.b.b ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.a.a.a.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00950000183178.b.a.jb.b ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b.c ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429.a.a ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00390000005732.h.b Monodontidae ANCESTRAL SPECIES 11 ENSGT01030000236716 ENSGT00950000182802.A.ab.b.b ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.a.a.a.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00950000183178.b.a.jb.b ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b.c ENSGT00940000154465.C ENSGT00390000013771.c ENSGT00730000111429.a.a ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00390000005732.h.b Beluga whale DUPLICATION Beluga whale MODERN SPECIES 111 ENSDLEG00000021194 ENSDLEG00000021198 TMPRSS2 (ENSDLEG00000021202) ENSDLEG00000021207 ENSDLEG00000021211 FAM3B (ENSDLEG00000021216) BACE2 (ENSDLEG00000021225) DSCAM (ENSDLEG00000021237) PCP4 (ENSDLEG00000017075) IGSF5 (ENSDLEG00000017082) B3GALT5 (ENSDLEG00000017088) SH3BGR (ENSDLEG00000017102) LCA5L (ENSDLEG00000017127) WRB (ENSDLEG00000017158) ENSDLEG00000017476 ##22 ENSDLEG00000019966 ##22 PSMG1 (ENSDLEG00000019972) ENSDLEG00000019984 ETS2 (ENSDLEG00000019986) ERG (ENSDLEG00000019992) KCNJ15 (ENSDLEG00000020013) KCNJ6 (ENSDLEG00000020019) DYRK1A (ENSDLEG00000020030) ENSDLEG00000020039 TTC3 (ENSDLEG00000020057) ENSDLEG00000020104 RIPPLY3 (ENSDLEG00000020108) HLCS (ENSDLEG00000020112) SIM2 (ENSDLEG00000020114) CLDN14 (ENSDLEG00000020123) ENSDLEG00000020128 Beluga whale MODERN SPECIES 111 RIPK4 (ENSDLEG00000021191) ENSDLEG00000021194 ENSDLEG00000021198 TMPRSS2 (ENSDLEG00000021202) ENSDLEG00000021207 ENSDLEG00000021211 FAM3B (ENSDLEG00000021216) BACE2 (ENSDLEG00000021225) DSCAM (ENSDLEG00000021237) PCP4 (ENSDLEG00000017075) IGSF5 (ENSDLEG00000017082) B3GALT5 (ENSDLEG00000017088) SH3BGR (ENSDLEG00000017102) LCA5L (ENSDLEG00000017127) WRB (ENSDLEG00000017158) ENSDLEG00000017476 ##22 ENSDLEG00000019966 ##22 PSMG1 (ENSDLEG00000019972) ENSDLEG00000019984 ETS2 (ENSDLEG00000019986) ERG (ENSDLEG00000019992) KCNJ15 (ENSDLEG00000020013) KCNJ6 (ENSDLEG00000020019) DYRK1A (ENSDLEG00000020030) ENSDLEG00000020039 TTC3 (ENSDLEG00000020057) ENSDLEG00000020104 RIPPLY3 (ENSDLEG00000020108) HLCS (ENSDLEG00000020112) SIM2 (ENSDLEG00000020114) CLDN14 (ENSDLEG00000020123) Narwhal MODERN SPECIES 297 ENSMMNG00015003659 ENSMMNG00015003689 TMPRSS2 (ENSMMNG00015003713) ENSMMNG00015003743 ENSMMNG00015003775 FAM3B (ENSMMNG00015003809) BACE2 (ENSMMNG00015003863) DSCAM (ENSMMNG00015003949) PCP4 (ENSMMNG00015004028) ENSMMNG00015004044 B3GALT5 (ENSMMNG00015004063) SH3BGR (ENSMMNG00015004078) LCA5L (ENSMMNG00015004108) GET1 (ENSMMNG00015004133) ENSMMNG00015004161 BRWD1 (ENSMMNG00015004196) ##22 PSMG1 (ENSMMNG00015004262) ENSMMNG00015004276 ETS2 (ENSMMNG00015004287) ERG (ENSMMNG00015004343) KCNJ15 (ENSMMNG00015004403) KCNJ6 (ENSMMNG00015004422) DYRK1A (ENSMMNG00015004461) ENSMMNG00015004538 TTC3 (ENSMMNG00015004584) ENSMMNG00015004651 RIPPLY3 (ENSMMNG00015004658) HLCS (ENSMMNG00015004663) SIM2 (ENSMMNG00015004676) CLDN14 (ENSMMNG00015004682) ENSMMNG00015004686 Vaquita MODERN SPECIES 15 RIPK4 (ENSPSNG00000004086) ENSPSNG00000004073 ENSPSNG00000004058 TMPRSS2 (ENSPSNG00000004031) ENSPSNG00000004017 FAM3B (ENSPSNG00000003986) BACE2 (ENSPSNG00000003936) DSCAM (ENSPSNG00000003835) PCP4 (ENSPSNG00000003804) ENSPSNG00000003781 B3GALT5 (ENSPSNG00000003756) SH3BGR (ENSPSNG00000003727) LCA5L (ENSPSNG00000003698) GET1 (ENSPSNG00000003633) ENSPSNG00000003581 BRWD1 (ENSPSNG00000003542) ##22 PSMG1 (ENSPSNG00000003503) ENSPSNG00000003490 ETS2 (ENSPSNG00000003466) ERG (ENSPSNG00000003229) KCNJ15 (ENSPSNG00000003129) KCNJ6 (ENSPSNG00000003108) DYRK1A (ENSPSNG00000003052) VPS26C (ENSPSNG00000002949) TTC3 (ENSPSNG00000002862) PIGP (ENSPSNG00000002811) ENSPSNG00000002780 HLCS (ENSPSNG00000002751) SIM2 (ENSPSNG00000002674) CLDN14 (ENSPSNG00000002661) ENSPSNG00000002647 Dolphin MODERN SPECIES 2295 SH3BGR (ENSTTRG00000015375) LCA5L (ENSTTRG00000015374) ENSTTRG00000015373 ENSTTRG00000015372 BRWD1 (ENSTTRG00000015371) ##22 PSMG1 (ENSTTRG00000015370) Sperm whale MODERN SPECIES 19 RIPK4 (ENSPCTG00005007402) TMPRSS2 (ENSPCTG00005007309) ENSPCTG00005007261 MX2 (ENSPCTG00005007105) FAM3B (ENSPCTG00005007016) BACE2 (ENSPCTG00005006931) DSCAM (ENSPCTG00005006665) PCP4 (ENSPCTG00005006627) ENSPCTG00005006605 B3GALT5 (ENSPCTG00005006578) ENSPCTG00005006556 LCA5L (ENSPCTG00005006541) WRB (ENSPCTG00005006465) HMGN1 (ENSPCTG00005006397) ENSPCTG00005006378 BRWD1 (ENSPCTG00005006235) ##22 PSMG1 (ENSPCTG00005006154) ENSPCTG00005006137 ENSPCTG00005006121 ETS2 (ENSPCTG00005006070) ENSPCTG00005006052 ENSPCTG00005005745 KCNJ15 (ENSPCTG00005005683) KCNJ6 (ENSPCTG00005005642) DYRK1A (ENSPCTG00005005555) VPS26C (ENSPCTG00005005269) ENSPCTG00005005156 ENSPCTG00005005076 RIPPLY3 (ENSPCTG00005005047) HLCS (ENSPCTG00005005026) SIM2 (ENSPCTG00005005005) Blue whale MODERN SPECIES 15 TMPRSS2 (ENSBMSG00010005432) MX1 (ENSBMSG00010005420) ENSBMSG00010005388 ENSBMSG00010005372 FAM3B (ENSBMSG00010005351) BACE2 (ENSBMSG00010005328) DSCAM (ENSBMSG00010005253) PCP4 (ENSBMSG00010005232) ENSBMSG00010005220 B3GALT5 (ENSBMSG00010005204) ENSBMSG00010005171 LCA5L (ENSBMSG00010005153) GET1 (ENSBMSG00010005140) ENSBMSG00010005116 ENSBMSG00010005108 BRWD1 (ENSBMSG00010005088) ##22 PSMG1 (ENSBMSG00010005067) ETS2 (ENSBMSG00010005046) ERG (ENSBMSG00010004899) KCNJ15 (ENSBMSG00010004859) KCNJ6 (ENSBMSG00010004842) DYRK1A (ENSBMSG00010004717) VPS26C (ENSBMSG00010004644) ENSBMSG00010004595 ENSBMSG00010004553 PIGP (ENSBMSG00010004522) ENSBMSG00010004502 HLCS (ENSBMSG00010004479) SIM2 (ENSBMSG00010004467) ENSBMSG00010004455 CLDN14 (ENSBMSG00010004447) Pecora ANCESTRAL SPECIES 8 ENSGT00940000161526.a ENSGT00940000163441.f.a.b.c.a.b ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.b.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000156421 ENSGT00390000010145.c.b ENSGT00940000160525 ENSGT01030000235108 ENSGT00390000016224.j.a ENSGT00390000011422 ENSGT00940000155519 ENSGT00940000160450 ENSGT00390000017582 ENSGT01030000234667.a.a.a.b ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398.d Percora_a ANCESTRAL SPECIES 7 ENSGT00940000161526.a ENSGT00940000163441.f.a.b.c.a.b.a ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.b.a.b.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000156421 ENSGT00390000010145.c.b ENSGT00940000160525 ENSGT01030000235108 ENSGT00390000016224.j.a ENSGT00390000011422 ENSGT00940000155519 ENSGT00940000160450 ENSGT00390000017582 ENSGT01030000234667.a.a.a.b ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398.d Bovidae ANCESTRAL SPECIES 9 ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.b ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.b.a.b.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000156421 ENSGT00390000010145.c.b ENSGT00940000160525 ENSGT01030000235108 ENSGT00390000016224.j.a ENSGT00390000011422 ENSGT00940000155519 ENSGT00940000160450 ENSGT00390000017582 ENSGT01030000234667.a.a.a.b ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398.d Bovinae ANCESTRAL SPECIES 6 ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.b ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.b.a.b.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00390000003718.d.sb.a ENSGT00940000156421 ENSGT00390000010145.c.b ENSGT00940000160525 ENSGT01030000235108 ENSGT00390000016224.j.a ENSGT00390000011422 ENSGT00940000155519 ENSGT00940000160450 ENSGT00390000017582 ENSGT01030000234667.a.a.a.b ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398.d Bos ANCESTRAL SPECIES 7 ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.b ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.b.a.b.b ENSGT00950000182802.A.bb ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00390000003718.d.sb.a ENSGT00940000156421 ENSGT00390000010145.c.b ENSGT00940000160525.h ENSGT01030000235108 ENSGT00390000016224.j.a ENSGT00390000011422 ENSGT00390000011666.h.a.a.b.a.a.a.a ENSGT00940000155519 ENSGT00940000160450 ENSGT00390000017582 ENSGT01030000234667.a.a.a.b ENSGT00940000160993 ENSGT00940000156177 Bos_b ANCESTRAL SPECIES 5 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT01030000238221 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00390000011549.k.a ENSGT00950000182802.A.bb ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000156421 ENSGT00390000010145.c.b ENSGT00940000160525.h ENSGT00390000016224.j.a ENSGT00390000011422 ENSGT00390000011666.h.a.a.b.a.a.a.a ENSGT00940000155519 ENSGT00940000160450 ENSGT00390000017582 ENSGT01030000234667.a.a.a.b ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398.d ENSGT00390000000626 Hybrid Bos Indicus MODERN SPECIES MX2 (ENSBIXG00005022650) FAM3B (ENSBIXG00005022792) BACE2 (ENSBIXG00005022860) ENSBIXG00005003909 DSCAM (ENSBIXG00005007073) PCP4 (ENSBIXG00005003943) ENSBIXG00005005999 ENSBIXG00005023175 B3GALT5 (ENSBIXG00005023200) ENSBIXG00005023221 SH3BGR (ENSBIXG00005023251) LCA5L (ENSBIXG00005003991) GET1 (ENSBIXG00005023381) ENSBIXG00005023486 ENSBIXG00005023526 BRWD1 (ENSBIXG00005023566) ##22 PSMG1 (ENSBIXG00005004043) ENSBIXG00005023658 ENSBIXG00005023680 ATP2C1 (ENSBIXG00005023827) ASTE1 (ENSBIXG00005023909) NEK11 (ENSBIXG00005024096) NUDT16 (ENSBIXG00005024166) ENSBIXG00005007236 MRPL3 (ENSBIXG00005024272) ENSBIXG00005004151 CPNE4 (ENSBIXG00005006175) ACP3 (ENSBIXG00005024909) ENSBIXG00005004251 ENSBIXG00005024930 DNAJC13 (ENSBIXG00005024967) Cow MODERN SPECIES TMPRSS2 (ENSBTAG00000009132) MX1 (ENSBTAG00000030913) MX2 (ENSBTAG00000008471) FAM3B (ENSBTAG00000030921) BACE2 (ENSBTAG00000000394) ENSBTAG00000054486 DSCAM (ENSBTAG00000004754) PCP4 (ENSBTAG00000051421) IGSF5 (ENSBTAG00000002029) B3GALT5 (ENSBTAG00000023407) SH3BGR (ENSBTAG00000007068) LCA5L (ENSBTAG00000030993) GET1 (ENSBTAG00000013629) ENSBTAG00000023106 HMGN1 (ENSBTAG00000018768) BRWD1 (ENSBTAG00000013602) ##22 PSMG1 (ENSBTAG00000013600) ENSBTAG00000050167 ATP2C1 (ENSBTAG00000011626) ASTE1 (ENSBTAG00000007462) NEK11 (ENSBTAG00000009258) NUDT16 (ENSBTAG00000018749) MRPL3 (ENSBTAG00000030942) ENSBTAG00000053358 CPNE4 (ENSBTAG00000010448) ENSBTAG00000054550 ENSBTAG00000054913 ENSBTAG00000049430 ENSBTAG00000054801 ACP3 (ENSBTAG00000011634) DNAJC13 (ENSBTAG00000002966) Bos_a ANCESTRAL SPECIES 5 ENSGT00940000161526.a ENSGT00940000163441.f.a.b.c.a.b.a.b.a.a.a.a ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.b.a.b.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00390000003718.d.sb.a ENSGT00940000156421 ENSGT00390000010145.c.b ENSGT00940000160525.h ENSGT01030000235108 ENSGT00390000016224.j.a ENSGT00390000011422 ENSGT00390000011666.h.a.a.b.a.a.a.a ENSGT00940000155519 ENSGT01100000263481.n.a.b.a.b.b.a.a.a.b.a.a.a.b.a.a ENSGT00940000160450 ENSGT00390000017582 ENSGT01030000234667.a.a.a.b ENSGT00940000160993 Wild yak MODERN SPECIES 2272 SH3BGR (ENSBMUG00000025661) LCA5L (ENSBMUG00000025646) GET1 (ENSBMUG00000025636) ENSBMUG00000025622 BRWD1 (ENSBMUG00000025609) ##22 PSMG1 (ENSBMUG00000025581) ENSBMUG00000025574 ENSBMUG00000025570 ATP2C1 (ENSBMUG00000025505) ASTE1 (ENSBMUG00000025421) ENSBMUG00000025414 Domestic yak MODERN SPECIES ENSBGRG00000014875 ENSBGRG00000014855 TMPRSS2 (ENSBGRG00000014644) MX1 (ENSBGRG00000014066) FAM3B (ENSBGRG00000013649) BACE2 (ENSBGRG00000013059) DSCAM (ENSBGRG00000012032) PCP4 (ENSBGRG00000011953) ENSBGRG00000011865 ENSBGRG00000011815 SH3BGR (ENSBGRG00000011752) LCA5L (ENSBGRG00000011685) ENSBGRG00000011465 ENSBGRG00000011188 ENSBGRG00000011102 BRWD1 (ENSBGRG00000009216) ##22 ATP2C1 (ENSBGRG00000008500) ASTE1 (ENSBGRG00000008357) NEK11 (ENSBGRG00000008075) NUDT16 (ENSBGRG00000008026) MRPL3 (ENSBGRG00000007836) ENSBGRG00000007802 CPNE4 (ENSBGRG00000007488) ENSBGRG00000007468 ACP3 (ENSBGRG00000007251) DNAJC13 (ENSBGRG00000007110) ACKR4 (ENSBGRG00000007089) ACAD11 (ENSBGRG00000006603) UBA5 (ENSBGRG00000006457) NPHP3 (ENSBGRG00000006292) TMEM108 (ENSBGRG00000006213) American bison MODERN SPECIES 2975 ENSBBBG00000007548 TMPRSS2 (ENSBBBG00000013909) MX1 (ENSBBBG00000013880) MX2 (ENSBBBG00000013811) FAM3B (ENSBBBG00000009103) BACE2 (ENSBBBG00000013772) DSCAM (ENSBBBG00000001524) ENSBBBG00000001530 PCP4 (ENSBBBG00000001532) ENSBBBG00000013694 B3GALT5 (ENSBBBG00000013686) SH3BGR (ENSBBBG00000013682) LCA5L (ENSBBBG00000013656) GET1 (ENSBBBG00000013645) ENSBBBG00000013623 BRWD1 (ENSBBBG00000013614) ##22 ENSBBBG00000013544 PSMG1 (ENSBBBG00000013540) ENSBBBG00000013524 ATP2C1 (ENSBBBG00000013474) ASTE1 (ENSBBBG00000012900) NEK11 (ENSBBBG00000012886) NUDT16 (ENSBBBG00000012784) MRPL3 (ENSBBBG00000012774) CPNE4 (ENSBBBG00000001799) ENSBBBG00000002449 Caprinae ANCESTRAL SPECIES 8 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT01030000238221 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000158524.h ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00440000033232.c.b.b.b ENSGT00950000182802.A.ab.b.b.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000156421 ENSGT00390000010145.c.b ENSGT00940000160525 ENSGT00390000016224.j.a ENSGT00390000011422 ENSGT00940000155519 ENSGT00940000160450 ENSGT00390000017582 ENSGT01030000234667.a.a.a.b ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398.d ENSGT00390000000626 Rambouillet Sheep MODERN SPECIES MX1 (ENSOARG00020002706) ENSOARG00020002693 MX2 (ENSOARG00020002675) ENSOARG00020002630 BACE2 (ENSOARG00020002588) ENSOARG00020002557 ENSOARG00020002543 DSCAM (ENSOARG00020002425) PCP4 (ENSOARG00020002413) ENSOARG00020002404 B3GALT5 (ENSOARG00020002400) SH3BGR (ENSOARG00020002389) LCA5L (ENSOARG00020002371) GET1 (ENSOARG00020002343) ENSOARG00020002318 BRWD1 (ENSOARG00020002189) ##22 PSMG1 (ENSOARG00020002147) ENSOARG00020002138 ENSOARG00020002122 ATP2C1 (ENSOARG00020001400) ASTE1 (ENSOARG00020001290) NEK11 (ENSOARG00020001241) NUDT16 (ENSOARG00020001207) MRPL3 (ENSOARG00020001178) ENSOARG00020001145 CPNE4 (ENSOARG00020001093) ACPP (ENSOARG00020001016) DNAJC13 (ENSOARG00020000598) ACKR4 (ENSOARG00020000542) UBA5 (ENSOARG00020000465) ACAD11 (ENSOARG00020000253) Goat MODERN SPECIES MX2 (ENSCHIG00000014150) FAM3B (ENSCHIG00000017490) ENSCHIG00000016035 BACE2 (ENSCHIG00000019839) ENSCHIG00000015454 ENSCHIG00000025338 DSCAM (ENSCHIG00000010917) PCP4 (ENSCHIG00000026748) ENSCHIG00000010437 B3GALT5 (ENSCHIG00000003423) SH3BGR (ENSCHIG00000018188) LCA5L (ENSCHIG00000013759) GET1 (ENSCHIG00000008859) ENSCHIG00000000879 ENSCHIG00000008037 BRWD1 (ENSCHIG00000013528) ##22 ENSCHIG00000022501 PSMG1 (ENSCHIG00000005726) ATP2C1 (ENSCHIG00000015474) ASTE1 (ENSCHIG00000021806) NEK11 (ENSCHIG00000008883) NUDT16 (ENSCHIG00000026305) ENSCHIG00000015651 MRPL3 (ENSCHIG00000024783) ENSCHIG00000018608 ENSCHIG00000005044 ACP3 (ENSCHIG00000016695) DNAJC13 (ENSCHIG00000010645) ACKR4 (ENSCHIG00000008163) ACAD11 (ENSCHIG00000025625) UBA5 (ENSCHIG00000021301) Siberian musk deer MODERN SPECIES 1183 ENSMMSG00000008654 B3GALT5 (ENSMMSG00000008639) SH3BGR (ENSMMSG00000008598) LCA5L (ENSMMSG00000008529) ENSMMSG00000008478 ENSMMSG00000008243 BRWD1 (ENSMMSG00000008117) ##22 PSMG1 (ENSMMSG00000008014) ATP2C1 (ENSMMSG00000006257) ASTE1 (ENSMMSG00000006134) NEK11 (ENSMMSG00000006064) NUDT16 (ENSMMSG00000006038) MRPL3 (ENSMMSG00000005958) ENSMMSG00000005928 ENSMMSG00000005910 ENSMMSG00000005896 CPNE4 (ENSMMSG00000005757) ACP3 (ENSMMSG00000005578) DNAJC13 (ENSMMSG00000005380) ACKR4 (ENSMMSG00000005346) ACAD11 (ENSMMSG00000005224) UBA5 (ENSMMSG00000004965) Yarkand deer MODERN SPECIES 10 ENSCHYG00000026581 TMPRSS2 (ENSCHYG00000026573) MX1 (ENSCHYG00000026565) MX2 (ENSCHYG00000026550) FAM3B (ENSCHYG00000026526) ENSCHYG00000026515 BACE2 (ENSCHYG00000026498) DSCAM (ENSCHYG00000026466) PCP4 (ENSCHYG00000026460) ENSCHYG00000026450 B3GALT5 (ENSCHYG00000026443) SH3BGR (ENSCHYG00000026419) LCA5L (ENSCHYG00000026397) GET1 (ENSCHYG00000026385) ENSCHYG00000026355 BRWD1 (ENSCHYG00000026058) ##22 ATP2C1 (ENSCHYG00000025704) ASTE1 (ENSCHYG00000025620) NEK11 (ENSCHYG00000025386) NUDT16 (ENSCHYG00000025324) MRPL3 (ENSCHYG00000025232) ENSCHYG00000025216 CPNE4 (ENSCHYG00000025161) ACP3 (ENSCHYG00000025072) DNAJC13 (ENSCHYG00000024993) ACKR4 (ENSCHYG00000024979) ACAD11 (ENSCHYG00000024913) UBA5 (ENSCHYG00000024785) NPHP3 (ENSCHYG00000024745) ENSCHYG00000024720 ENSCHYG00000024698 Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00940000161526.a ENSGT00940000163441.f.a.b ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.bb ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00950000185378 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00940000161526.b ENSGT00940000161526.a ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Equus ANCESTRAL SPECIES 42 ENSGT00940000161526.b.b.a.a.a ENSGT00940000163258.b ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Horse MODERN SPECIES 18 ENSECAG00000007982 ENSECAG00000053969 TMPRSS2 (ENSECAG00000022289) MX1 (ENSECAG00000011776) MX2 (ENSECAG00000049815) FAM3B (ENSECAG00000043951) BACE2 (ENSECAG00000005305) DSCAM (ENSECAG00000012936) PCP4 (ENSECAG00000012551) IGSF5 (ENSECAG00000012049) B3GALT5 (ENSECAG00000004805) SH3BGR (ENSECAG00000010747) LCA5L (ENSECAG00000008618) GET1 (ENSECAG00000007859) ENSECAG00000059753 BRWD1 (ENSECAG00000022262) ##22 PSMG1 (ENSECAG00000060286) ETS2 (ENSECAG00000021269) ERG (ENSECAG00000010667) KCNJ15 (ENSECAG00000008811) KCNJ6 (ENSECAG00000004703) DYRK1A (ENSECAG00000024965) VPS26C (ENSECAG00000023577) ENSECAG00000059353 ENSECAG00000049180 ENSECAG00000003520 TTC3 (ENSECAG00000019685) PIGP (ENSECAG00000019349) RIPPLY3 (ENSECAG00000018917) HLCS (ENSECAG00000012050) SIM2 (ENSECAG00000016631) Donkey MODERN SPECIES 9 ENSEASG00005014723 ENSEASG00005032518 ENSEASG00005003908 MX1 (ENSEASG00005003911) MX2 (ENSEASG00005004002) FAM3B (ENSEASG00005029773) BACE2 (ENSEASG00005006036) DSCAM (ENSEASG00005006046) PCP4 (ENSEASG00005028031) ENSEASG00005006052 B3GALT5 (ENSEASG00005032992) SH3BGR (ENSEASG00005006056) LCA5L (ENSEASG00005006060) GET1 (ENSEASG00005027299) HMGN1 (ENSEASG00005036575) BRWD1 (ENSEASG00005006066) ##22 PSMG1 (ENSEASG00005006069) ETS2 (ENSEASG00005006072) ERG (ENSEASG00005006076) KCNJ15 (ENSEASG00005025006) KCNJ6 (ENSEASG00005006078) DYRK1A (ENSEASG00005006080) VPS26C (ENSEASG00005006082) ENSEASG00005032100 ENSEASG00005006084 ENSEASG00005025788 RIPPLY3 (ENSEASG00005033801) HLCS (ENSEASG00005006090) SIM2 (ENSEASG00005006092) CLDN14 (ENSEASG00005006099) CHAF1B (ENSEASG00005006101) Chiroptera ANCESTRAL SPECIES 35 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000163845 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Megabat MODERN SPECIES 2708 ENSPVAG00000015690 BRWD1 (ENSPVAG00000015689) ##22 PSMG1 (ENSPVAG00000015688) Microchiroptera ANCESTRAL SPECIES 37 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000163845 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Greater horseshoe bat MODERN SPECIES 11 RIPK4 (ENSRFEG00010004153) ENSRFEG00010004128 TMPRSS2 (ENSRFEG00010004092) MX2 (ENSRFEG00010004048) BACE2 (ENSRFEG00010003983) DSCAM (ENSRFEG00010003886) PCP4 (ENSRFEG00010003849) ENSRFEG00010003825 B3GALT5 (ENSRFEG00010003750) SH3BGR (ENSRFEG00010003716) ENSRFEG00010003692 ENSRFEG00010003681 GET1 (ENSRFEG00010003643) ENSRFEG00010003567 ENSRFEG00010003531 BRWD1 (ENSRFEG00010003441) ##22 ENSRFEG00010003400 PSMG1 (ENSRFEG00010003385) ENSRFEG00010003371 ETS2 (ENSRFEG00010003341) ERG (ENSRFEG00010003217) KCNJ15 (ENSRFEG00010003123) KCNJ6 (ENSRFEG00010003110) DYRK1A (ENSRFEG00010003073) VPS26C (ENSRFEG00010002992) TTC3 (ENSRFEG00010002881) PIGP (ENSRFEG00010002809) ENSRFEG00010002789 HLCS (ENSRFEG00010002742) SIM2 (ENSRFEG00010002703) CLDN14 (ENSRFEG00010002684) Microbat MODERN SPECIES 1309 ENSMLUG00000013499 LCA5L (ENSMLUG00000013494) GET1 (ENSMLUG00000001064) BRWD1 (ENSMLUG00000006128) ##22 PSMG1 (ENSMLUG00000006122) ETS2 (ENSMLUG00000009370) ERG (ENSMLUG00000009355) KCNJ15 (ENSMLUG00000002815) Carnivora ANCESTRAL SPECIES 10 ENSGT00940000163441.f.a.b ENSGT00940000163845 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.bb ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00950000185378 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Felidae ANCESTRAL SPECIES 9 ENSGT00940000161526.b ENSGT00940000161526.a ENSGT00940000163441.f.b.a.b ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.bb ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771.o.b ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Cat MODERN SPECIES 240 ENSFCAG00000039699 ENSFCAG00000044509 ENSFCAG00000053296 TMPRSS2 (ENSFCAG00000008071) MX1 (ENSFCAG00000008068) FAM3B (ENSFCAG00000001970) BACE2 (ENSFCAG00000001969) DSCAM (ENSFCAG00000008209) PCP4 (ENSFCAG00000035623) IGSF5 (ENSFCAG00000004674) B3GALT5 (ENSFCAG00000004673) SH3BGR (ENSFCAG00000004671) LCA5L (ENSFCAG00000008508) GET1 (ENSFCAG00000042925) ENSFCAG00000046512 BRWD1 (ENSFCAG00000031344) ##22 PSMG1 (ENSFCAG00000038855) ENSFCAG00000053464 ETS2 (ENSFCAG00000007489) ERG (ENSFCAG00000007485) KCNJ15 (ENSFCAG00000025648) KCNJ6 (ENSFCAG00000005152) DYRK1A (ENSFCAG00000024560) VPS26C (ENSFCAG00000012830) ENSFCAG00000044240 ENSFCAG00000023776 ENSFCAG00000043461 ENSFCAG00000038780 RIPPLY3 (ENSFCAG00000043170) HLCS (ENSFCAG00000002943) SIM2 (ENSFCAG00000023063) Panthera ANCESTRAL SPECIES 17 ENSGT00940000161028 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.bb ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771.o.b ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Tiger MODERN SPECIES 321 C2CD2 (ENSPTIG00000020254) PRDM15 (ENSPTIG00000019585) TMPRSS2 (ENSPTIG00000018133) MX1 (ENSPTIG00000017829) FAM3B (ENSPTIG00000016871) BACE2 (ENSPTIG00000015773) DSCAM (ENSPTIG00000012935) PCP4 (ENSPTIG00000012652) B3GALT5 (ENSPTIG00000012211) SH3BGR (ENSPTIG00000011349) LCA5L (ENSPTIG00000010441) GET1 (ENSPTIG00000009749) HMGN1 (ENSPTIG00000009429) BRWD1 (ENSPTIG00000021862) ##22 PSMG1 (ENSPTIG00000021655) ETS2 (ENSPTIG00000021524) ERG (ENSPTIG00000019250) KCNJ15 (ENSPTIG00000018526) KCNJ6 (ENSPTIG00000018401) DYRK1A (ENSPTIG00000017042) VPS26C (ENSPTIG00000016242) ENSPTIG00000016074 ENSPTIG00000015431 ENSPTIG00000014304 PIGP (ENSPTIG00000012877) RIPPLY3 (ENSPTIG00000012747) HLCS (ENSPTIG00000011329) SIM2 (ENSPTIG00000010539) ENSPTIG00000005477 Panthera_a ANCESTRAL SPECIES 21 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771.o.b ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 lion MODERN SPECIES 9 PRDM15 (ENSPLOG00000013728) RIPK4 (ENSPLOG00000013487) ENSPLOG00000013454 ENSPLOG00000013430 ENSPLOG00000013356 TMPRSS2 (ENSPLOG00000013265) MX1 (ENSPLOG00000012833) FAM3B (ENSPLOG00000012689) BACE2 (ENSPLOG00000012363) DSCAM (ENSPLOG00000011858) PCP4 (ENSPLOG00000011697) B3GALT5 (ENSPLOG00000011684) SH3BGR (ENSPLOG00000011642) LCA5L (ENSPLOG00000011547) GET1 (ENSPLOG00000011476) BRWD1 (ENSPLOG00000011385) ##22 PSMG1 (ENSPLOG00000011266) ETS2 (ENSPLOG00000011156) ERG (ENSPLOG00000011044) KCNJ15 (ENSPLOG00000010261) KCNJ6 (ENSPLOG00000010233) DYRK1A (ENSPLOG00000010164) VPS26C (ENSPLOG00000010027) ENSPLOG00000009977 ENSPLOG00000009872 ENSPLOG00000009813 ENSPLOG00000009707 RIPPLY3 (ENSPLOG00000009670) HLCS (ENSPLOG00000009617) SIM2 (ENSPLOG00000009477) CLDN14 (ENSPLOG00000009438) Caniformia ANCESTRAL SPECIES ENSGT00940000163441.f.a.b ENSGT00940000163845 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.bb ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00950000185378 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Caniformia_b ANCESTRAL SPECIES ENSGT00940000159908 ENSGT00940000163845 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.bb ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00950000185378 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Ursidae ANCESTRAL SPECIES 1 ENSGT00940000159908 ENSGT00940000163845.i ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.bb ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00950000185378 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Ursus ANCESTRAL SPECIES 49 ENSGT00530000064267 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 American black bear MODERN SPECIES 612 LCA5L (ENSUAMG00000007210) GET1 (ENSUAMG00000007212) BRWD1 (ENSUAMG00000007224) ##22 PSMG1 (ENSUAMG00000007274) Polar bear MODERN SPECIES 240 PCP4 (ENSUMAG00000001875) B3GALT5 (ENSUMAG00000001861) SH3BGR (ENSUMAG00000001849) LCA5L (ENSUMAG00000001836) GET1 (ENSUMAG00000001833) BRWD1 (ENSUMAG00000000587) ##22 PSMG1 (ENSUMAG00000000490) ETS2 (ENSUMAG00000000475) ERG (ENSUMAG00000000447) KCNJ15 (ENSUMAG00000000438) KCNJ6 (ENSUMAG00000000333) DYRK1A (ENSUMAG00000000314) VPS26C (ENSUMAG00000000275) TTC3 (ENSUMAG00000000221) PIGP (ENSUMAG00000000187) RIPPLY3 (ENSUMAG00000000142) HLCS (ENSUMAG00000000070) SIM2 (ENSUMAG00000020665) ENSUMAG00000020663 CHAF1B (ENSUMAG00000020659) MORC3 (ENSUMAG00000020612) Giant Panda MODERN SPECIES PRDM15 (ENSAMEG00000002162) RIPK4 (ENSAMEG00000002205) ENSAMEG00000031524 ENSAMEG00000024617 TMPRSS2 (ENSAMEG00000010563) MX1 (ENSAMEG00000010494) FAM3B (ENSAMEG00000005115) BACE2 (ENSAMEG00000005103) DSCAM (ENSAMEG00000005759) ENSAMEG00000006410 B3GALT5 (ENSAMEG00000019434) SH3BGR (ENSAMEG00000028047) LCA5L (ENSAMEG00000014108) GET1 (ENSAMEG00000014104) HMGN1 (ENSAMEG00000014100) BRWD1 (ENSAMEG00000014080) ##22 PSMG1 (ENSAMEG00000014078) ETS2 (ENSAMEG00000016631) ERG (ENSAMEG00000016610) KCNJ15 (ENSAMEG00000005431) ENSAMEG00000029134 KCNJ6 (ENSAMEG00000018222) DYRK1A (ENSAMEG00000018223) VPS26C (ENSAMEG00000009425) ENSAMEG00000028137 HLCS (ENSAMEG00000005602) SIM2 (ENSAMEG00000005588) CLDN14 (ENSAMEG00000018735) CHAF1B (ENSAMEG00000005560) MORC3 (ENSAMEG00000005512) DOP1B (ENSAMEG00000005447) Mustelinae ANCESTRAL SPECIES 67 ENSGT00940000157890.c ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.bb ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Ferret MODERN SPECIES 248 ENSMPUG00000008922 TMPRSS2 (ENSMPUG00000008804) MX1 (ENSMPUG00000008778) MX2 (ENSMPUG00000008716) FAM3B (ENSMPUG00000008701) BACE2 (ENSMPUG00000008693) ENSMPUG00000008687 ENSMPUG00000008669 PCP4 (ENSMPUG00000008663) ENSMPUG00000008652 B3GALT5 (ENSMPUG00000008621) SH3BGR (ENSMPUG00000008609) LCA5L (ENSMPUG00000008561) GET1 (ENSMPUG00000008557) HMGN1 (ENSMPUG00000008550) BRWD1 (ENSMPUG00000008515) ##22 PSMG1 (ENSMPUG00000008503) ETS2 (ENSMPUG00000008494) ENSMPUG00000008489 ENSMPUG00000008483 ERG (ENSMPUG00000008474) KCNJ15 (ENSMPUG00000019063) KCNJ6 (ENSMPUG00000008470) DYRK1A (ENSMPUG00000008456) VPS26C (ENSMPUG00000008447) TTC3 (ENSMPUG00000008316) PIGP (ENSMPUG00000008312) RIPPLY3 (ENSMPUG00000008305) HLCS (ENSMPUG00000008271) SIM2 (ENSMPUG00000008240) ENSMPUG00000008235 American mink MODERN SPECIES 203 LCA5L (ENSNVIG00000017153) WRB (ENSNVIG00000017088) ENSNVIG00000017061 BRWD1 (ENSNVIG00000016970) ##22 PSMG1 (ENSNVIG00000016937) ETS2 (ENSNVIG00000016916) ERG (ENSNVIG00000016660) KCNJ15 (ENSNVIG00000016642) IRK6 (ENSNVIG00000016616) DYRK1A (ENSNVIG00000016237) VPS26C (ENSNVIG00000016174) ENSNVIG00000016126 ENSNVIG00000016101 ENSNVIG00000016074 RIPPLY3 (ENSNVIG00000016055) HLCS (ENSNVIG00000016037) SIM2 (ENSNVIG00000015967) CLDN14 (ENSNVIG00000015954) CHAF1B (ENSNVIG00000015898) Canidae ANCESTRAL SPECIES 39 ENSGT00940000163441.f.a.a.b.b ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.a.b ENSGT00390000016972.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a.`b ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Red fox DUPLICATION Red fox MODERN SPECIES 245 B3GALT5 (ENSVVUG00000025865) ENSVVUG00000025859 SH3BGR (ENSVVUG00000025857) LCA5L (ENSVVUG00000025854) WRB (ENSVVUG00000025853) ENSVVUG00000025852 ENSVVUG00000024600 ##22 ENSVVUG00000024512 ##22 PSMG1 (ENSVVUG00000024504) ETS2 (ENSVVUG00000024499) ERG (ENSVVUG00000024490) KCNJ15 (ENSVVUG00000024488) Red fox MODERN SPECIES 245 B3GALT5 (ENSVVUG00000025865) ENSVVUG00000025859 SH3BGR (ENSVVUG00000025857) LCA5L (ENSVVUG00000025854) WRB (ENSVVUG00000025853) ENSVVUG00000025852 ENSVVUG00000024600 ##22 ENSVVUG00000024512 ##22 PSMG1 (ENSVVUG00000024504) ETS2 (ENSVVUG00000024499) ERG (ENSVVUG00000024490) KCNJ15 (ENSVVUG00000024488) Canis_lupus ANCESTRAL SPECIES 38 ENSGT00940000155183.a.a ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.ab.a.b ENSGT00390000016972.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a.`b ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Dog MODERN SPECIES 24 ENSCAFG00845030203 ENSCAFG00845030190 TMPRSS2 (ENSCAFG00845030150) MX1 (ENSCAFG00845030104) FAM3B (ENSCAFG00845030073) BACE2 (ENSCAFG00845030032) DSCAM (ENSCAFG00845029877) PCP4 (ENSCAFG00845029822) IGSF5 (ENSCAFG00845029797) B3GALT5 (ENSCAFG00845029783) SH3BGR (ENSCAFG00845029733) LCA5L (ENSCAFG00845029679) GET1 (ENSCAFG00845029628) HMGN1 (ENSCAFG00845029582) ENSCAFG00845029559 BRWD1 (ENSCAFG00845029268) ##22 ENSCAFG00845029206 ETS2 (ENSCAFG00845029168) ERG (ENSCAFG00845029042) KCNJ15 (ENSCAFG00845028983) KCNJ6 (ENSCAFG00845028925) ENSCAFG00845028884 DYRK1A (ENSCAFG00845028759) VPS26C (ENSCAFG00845028583) TTC3 (ENSCAFG00845028091) ENSCAFG00845027926 RIPPLY3 (ENSCAFG00845027840) HLCS (ENSCAFG00845027738) SIM2 (ENSCAFG00845027660) CLDN14 (ENSCAFG00845027623) CHAF1B (ENSCAFG00845027567) Dingo DUPLICATION Dingo MODERN SPECIES 328 BACE2 (ENSCAFG00020024310) DSCAM (ENSCAFG00020024318) PCP4 (ENSCAFG00020024321) ENSCAFG00020024323 B3GALT5 (ENSCAFG00020024324) SH3BGR (ENSCAFG00020024325) LCA5L (ENSCAFG00020024326) GET1 (ENSCAFG00020024327) ENSCAFG00020024329 ENSCAFG00020024332 ENSCAFG00020024338 ##22 ENSCAFG00020024347 ##22 PSMG1 (ENSCAFG00020024349) ETS2 (ENSCAFG00020024353) ERG (ENSCAFG00020024360) KCNJ15 (ENSCAFG00020024361) KCNJ6 (ENSCAFG00020024367) DYRK1A (ENSCAFG00020024369) VPS26C (ENSCAFG00020024376) ENSCAFG00020024382 ENSCAFG00020024394 ENSCAFG00020024400 ENSCAFG00020024407 ENSCAFG00020024422 SIM2 (ENSCAFG00020024427) CLDN14 (ENSCAFG00020024431) CHAF1B (ENSCAFG00020024433) Dingo MODERN SPECIES 328 BACE2 (ENSCAFG00020024310) DSCAM (ENSCAFG00020024318) PCP4 (ENSCAFG00020024321) ENSCAFG00020024323 B3GALT5 (ENSCAFG00020024324) SH3BGR (ENSCAFG00020024325) LCA5L (ENSCAFG00020024326) GET1 (ENSCAFG00020024327) ENSCAFG00020024329 ENSCAFG00020024332 ENSCAFG00020024338 ##22 ENSCAFG00020024347 ##22 PSMG1 (ENSCAFG00020024349) ETS2 (ENSCAFG00020024353) ERG (ENSCAFG00020024360) KCNJ15 (ENSCAFG00020024361) KCNJ6 (ENSCAFG00020024367) DYRK1A (ENSCAFG00020024369) VPS26C (ENSCAFG00020024376) ENSCAFG00020024382 ENSCAFG00020024394 ENSCAFG00020024400 ENSCAFG00020024407 ENSCAFG00020024422 SIM2 (ENSCAFG00020024427) CLDN14 (ENSCAFG00020024431) Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00390000011549 ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Tree shrew MODERN SPECIES 5553 BRWD1 (ENSTBEG00000013802) ##22 PSMG1 (ENSTBEG00000013621) Glires ANCESTRAL SPECIES 2 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Lagomorpha ANCESTRAL SPECIES 366 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 Rabbit MODERN SPECIES 640 SH3BGR (ENSOCUG00000001522) LCA5L (ENSOCUG00000001518) ENSOCUG00000023984 BRWD1 (ENSOCUG00000008870) ##22 PSMG1 (ENSOCUG00000008866) Pika MODERN SPECIES 3952 ENSOPRG00000013281 ##22 PSMG1 (ENSOPRG00000013269) Rodentia ANCESTRAL SPECIES 2 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Rodentia_A ANCESTRAL SPECIES 5 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Hystricomorpha ANCESTRAL SPECIES 18 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b.m ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C.w ENSGT00390000013771.bb ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 11 ENSHGLG00000014759 ENSHGLG00000015303 ENSHGLG00000038478 ENSHGLG00000033972 ENSHGLG00000014926 ENSHGLG00000045024 ENSHGLG00000015085 ENSHGLG00000040175 SH3BGR (ENSHGLG00000015469) ENSHGLG00000044589 ENSHGLG00000015714 GET1 (ENSHGLG00000012972) ENSHGLG00000013690 ENSHGLG00000034155 ENSHGLG00000042854 ##22 ENSHGLG00000017831 ##22 PSMG1 (ENSHGLG00000017867) ENSHGLG00000045422 ETS2 (ENSHGLG00000017830) ENSHGLG00000042102 ERG (ENSHGLG00000017640) KCNJ15 (ENSHGLG00000046846) KCNJ6 (ENSHGLG00000018429) DYRK1A (ENSHGLG00000004983) VPS26C (ENSHGLG00000005099) TTC3 (ENSHGLG00000005139) ENSHGLG00000044048 ENSHGLG00000044887 HLCS (ENSHGLG00000008266) SIM2 (ENSHGLG00000008945) ENSHGLG00000009709 Naked mole-rat female MODERN SPECIES 11 ENSHGLG00000040770 ENSHGLG00000014759 ENSHGLG00000015303 ENSHGLG00000038478 ENSHGLG00000033972 ENSHGLG00000014926 ENSHGLG00000045024 ENSHGLG00000015085 ENSHGLG00000040175 SH3BGR (ENSHGLG00000015469) ENSHGLG00000044589 ENSHGLG00000015714 GET1 (ENSHGLG00000012972) ENSHGLG00000013690 ENSHGLG00000034155 ENSHGLG00000042854 ##22 ENSHGLG00000017831 ##22 PSMG1 (ENSHGLG00000017867) ENSHGLG00000045422 ETS2 (ENSHGLG00000017830) ENSHGLG00000042102 ERG (ENSHGLG00000017640) KCNJ15 (ENSHGLG00000046846) KCNJ6 (ENSHGLG00000018429) DYRK1A (ENSHGLG00000004983) VPS26C (ENSHGLG00000005099) TTC3 (ENSHGLG00000005139) ENSHGLG00000044048 ENSHGLG00000044887 HLCS (ENSHGLG00000008266) SIM2 (ENSHGLG00000008945) Hystricomorpha_a ANCESTRAL SPECIES 37 ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989 ENSGT00390000008490 ENSGT00390000011821.a ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b.m ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C.w ENSGT00390000013771.bb ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Guinea pig DUPLICATION Guinea pig MODERN SPECIES 90 ENSCPOG00000035722 PKNOX1 (ENSCPOG00000039252) CBS (ENSCPOG00000007817) U2AF1 (ENSCPOG00000004893) Cryaa (ENSCPOG00000004350) SIK1 (ENSCPOG00000026214) HSF2BP (ENSCPOG00000002394) RRP1B (ENSCPOG00000002396) ENSCPOG00000004718 B3GALT5 (ENSCPOG00000035318) SH3BGR (ENSCPOG00000003488) LCA5L (ENSCPOG00000021836) GET1 (ENSCPOG00000040238) HMGN1 (ENSCPOG00000033135) ENSCPOG00000039624 ##22 ENSCPOG00000010784 ##22 PSMG1 (ENSCPOG00000027117) ETS2 (ENSCPOG00000015014) ERG (ENSCPOG00000007484) KCNJ15 (ENSCPOG00000019502) KCNJ6 (ENSCPOG00000009568) DYRK1A (ENSCPOG00000037211) VPS26C (ENSCPOG00000013144) ENSCPOG00000007158 ENSCPOG00000032684 ENSCPOG00000007156 HLCS (ENSCPOG00000007955) SIM2 (ENSCPOG00000023156) CLDN14 (ENSCPOG00000007601) CHAF1B (ENSCPOG00000006333) MORC3 (ENSCPOG00000006321) Guinea pig MODERN SPECIES 90 WDR4 (ENSCPOG00000037037) ENSCPOG00000035722 PKNOX1 (ENSCPOG00000039252) CBS (ENSCPOG00000007817) U2AF1 (ENSCPOG00000004893) Cryaa (ENSCPOG00000004350) SIK1 (ENSCPOG00000026214) HSF2BP (ENSCPOG00000002394) RRP1B (ENSCPOG00000002396) ENSCPOG00000004718 B3GALT5 (ENSCPOG00000035318) SH3BGR (ENSCPOG00000003488) LCA5L (ENSCPOG00000021836) GET1 (ENSCPOG00000040238) HMGN1 (ENSCPOG00000033135) ENSCPOG00000039624 ##22 ENSCPOG00000010784 ##22 PSMG1 (ENSCPOG00000027117) ETS2 (ENSCPOG00000015014) ERG (ENSCPOG00000007484) KCNJ15 (ENSCPOG00000019502) KCNJ6 (ENSCPOG00000009568) DYRK1A (ENSCPOG00000037211) VPS26C (ENSCPOG00000013144) ENSCPOG00000007158 ENSCPOG00000032684 ENSCPOG00000007156 HLCS (ENSCPOG00000007955) SIM2 (ENSCPOG00000023156) CLDN14 (ENSCPOG00000007601) CHAF1B (ENSCPOG00000006333) Hystricomorpha_b ANCESTRAL SPECIES 34 ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989 ENSGT00390000008490 ENSGT00390000011821.a ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b.m ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C.w ENSGT00390000013771.bb ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Long-tailed chinchilla MODERN SPECIES 114 NDUFV3 (ENSCLAG00000010460) PKNOX1 (ENSCLAG00000009292) CBS (ENSCLAG00000012158) U2AF1 (ENSCLAG00000009589) CRYAA (ENSCLAG00000008715) SIK1 (ENSCLAG00000004717) HSF2BP (ENSCLAG00000006525) RRP1B (ENSCLAG00000005622) ENSCLAG00000008829 ENSCLAG00000006218 B3GALT5 (ENSCLAG00000009203) ENSCLAG00000008933 SH3BGR (ENSCLAG00000008599) GET1 (ENSCLAG00000005886) HMGN1 (ENSCLAG00000005744) ENSCLAG00000004395 ##22 PSMG1 (ENSCLAG00000006759) ETS2 (ENSCLAG00000005803) ERG (ENSCLAG00000005608) KCNJ15 (ENSCLAG00000007017) ENSCLAG00000008450 KCNJ6 (ENSCLAG00000005671) DYRK1A (ENSCLAG00000011834) VPS26C (ENSCLAG00000010591) ENSCLAG00000009431 ENSCLAG00000008569 ENSCLAG00000006455 ENSCLAG00000006237 HLCS (ENSCLAG00000004714) SIM2 (ENSCLAG00000012698) CLDN14 (ENSCLAG00000009427) Degu DUPLICATION Degu MODERN SPECIES 86 ENSODEG00000012402 ENSODEG00000014099 PKNOX1 (ENSODEG00000012122) CBS (ENSODEG00000012996) U2AF1 (ENSODEG00000014749) CRYAA (ENSODEG00000014166) SIK1 (ENSODEG00000012072) HSF2BP (ENSODEG00000011763) RRP1B (ENSODEG00000013177) ENSODEG00000013785 ENSODEG00000012206 ENSODEG00000013679 SH3BGR (ENSODEG00000013522) LCA5L (ENSODEG00000012419) GET1 (ENSODEG00000011999) ENSODEG00000011845 ##22 ENSODEG00000012050 ##22 PSMG1 (ENSODEG00000013481) ETS2 (ENSODEG00000012054) ERG (ENSODEG00000011796) KCNJ15 (ENSODEG00000012281) ENSODEG00000011894 KCNJ6 (ENSODEG00000011396) DYRK1A (ENSODEG00000011707) ENSODEG00000019985 VPS26C (ENSODEG00000011654) ENSODEG00000012671 ENSODEG00000012435 PIGP (ENSODEG00000011154) Degu MODERN SPECIES 86 ENSODEG00000014099 PKNOX1 (ENSODEG00000012122) CBS (ENSODEG00000012996) U2AF1 (ENSODEG00000014749) CRYAA (ENSODEG00000014166) SIK1 (ENSODEG00000012072) HSF2BP (ENSODEG00000011763) RRP1B (ENSODEG00000013177) ENSODEG00000013785 ENSODEG00000012206 ENSODEG00000013679 SH3BGR (ENSODEG00000013522) LCA5L (ENSODEG00000012419) GET1 (ENSODEG00000011999) ENSODEG00000011845 ##22 ENSODEG00000012050 ##22 PSMG1 (ENSODEG00000013481) ETS2 (ENSODEG00000012054) ERG (ENSODEG00000011796) KCNJ15 (ENSODEG00000012281) ENSODEG00000011894 KCNJ6 (ENSODEG00000011396) DYRK1A (ENSODEG00000011707) ENSODEG00000019985 VPS26C (ENSODEG00000011654) ENSODEG00000012671 ENSODEG00000012435 PIGP (ENSODEG00000011154) Sciuridae ANCESTRAL SPECIES 12 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Eurasian red squirrel MODERN SPECIES 1 PRDM15 (ENSSVLG00005015213) RIPK4 (ENSSVLG00005015741) TMPRSS2 (ENSSVLG00005015845) ENSSVLG00005015978 FAM3B (ENSSVLG00005016099) ENSSVLG00005016342 BACE2 (ENSSVLG00005017213) DSCAM (ENSSVLG00005017352) PCP4 (ENSSVLG00005018045) ENSSVLG00005018094 B3GALT5 (ENSSVLG00005018186) SH3BGR (ENSSVLG00005018209) LCA5L (ENSSVLG00005018302) GET1 (ENSSVLG00005018408) ENSSVLG00005018529 ENSSVLG00005018655 ##22 ENSSVLG00005018680 PSMG1 (ENSSVLG00005018720) ETS2 (ENSSVLG00005018858) ERG (ENSSVLG00005018996) KCNJ15 (ENSSVLG00005019329) KCNJ6 (ENSSVLG00005019383) DYRK1A (ENSSVLG00005019571) ENSSVLG00005019993 ENSSVLG00005019788 ENSSVLG00005020036 ENSSVLG00005020080 ENSSVLG00005020110 ENSSVLG00005020331 SIM2 (ENSSVLG00005020374) CLDN14 (ENSSVLG00005020475) Marmotini ANCESTRAL SPECIES 13 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00950000182901.a.a.a.b.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Alpin marmot MODERN SPECIES 4 PRDM15 (ENSMMMG00000010191) RIPK4 (ENSMMMG00000010156) TMPRSS2 (ENSMMMG00000010132) MX1 (ENSMMMG00000004765) FAM3B (ENSMMMG00000004645) BACE2 (ENSMMMG00000004641) DSCAM (ENSMMMG00000004573) PCP4 (ENSMMMG00000004533) ENSMMMG00000004498 B3GALT5 (ENSMMMG00000004484) ENSMMMG00000004462 SH3BGR (ENSMMMG00000004305) LCA5L (ENSMMMG00000004259) GET1 (ENSMMMG00000004202) HMGN1 (ENSMMMG00000004197) BRWD1 (ENSMMMG00000004116) ##22 ENSMMMG00000004110 PSMG1 (ENSMMMG00000004106) ETS2 (ENSMMMG00000004068) ERG (ENSMMMG00000003632) KCNJ15 (ENSMMMG00000003594) KCNJ6 (ENSMMMG00000003548) DYRK1A (ENSMMMG00000003463) VPS26C (ENSMMMG00000003435) TTC3 (ENSMMMG00000003016) PIGP (ENSMMMG00000002981) ENSMMMG00000002971 ENSMMMG00000002958 CLDN14 (ENSMMMG00000002911) CHAF1B (ENSMMMG00000002837) MORC3 (ENSMMMG00000002800) Marmotini_b ANCESTRAL SPECIES 30 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00950000183004.a.b.a.b ENSGT00940000155686 ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00950000182901.a.a.a.b.b ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a Squirrel MODERN SPECIES 100 ZBTB21 (ENSSTOG00000010003) C2CD2 (ENSSTOG00000015690) PRDM15 (ENSSTOG00000000262) RIPK4 (ENSSTOG00000020499) TMPRSS2 (ENSSTOG00000012868) FAM3B (ENSSTOG00000006382) MX1 (ENSSTOG00000012846) BACE2 (ENSSTOG00000011669) DSCAM (ENSSTOG00000004849) PCP4 (ENSSTOG00000033674) ENSSTOG00000002986 B3GALT5 (ENSSTOG00000012749) SH3BGR (ENSSTOG00000020100) GET1 (ENSSTOG00000012736) HMGN1 (ENSSTOG00000030815) BRWD1 (ENSSTOG00000027149) ##22 PSMG1 (ENSSTOG00000007084) ETS2 (ENSSTOG00000024655) ERG (ENSSTOG00000025814) KCNJ15 (ENSSTOG00000000052) KCNJ6 (ENSSTOG00000016154) DYRK1A (ENSSTOG00000016151) ENSSTOG00000020762 ENSSTOG00000004274 PIGP (ENSSTOG00000010943) ENSSTOG00000031463 HLCS (ENSSTOG00000015476) CLDN14 (ENSSTOG00000023003) CHAF1B (ENSSTOG00000001427) MORC3 (ENSSTOG00000028859) DOP1B (ENSSTOG00000003970) Arctic ground squirrel MODERN SPECIES 212 BACE2 (ENSUPAG00010020456) DSCAM (ENSUPAG00010020438) PCP4 (ENSUPAG00010020435) ENSUPAG00010020403 B3GALT5 (ENSUPAG00010020398) ENSUPAG00010020395 SH3BGR (ENSUPAG00010020382) LCA5L (ENSUPAG00010020362) ENSUPAG00010020344 ENSUPAG00010020326 ENSUPAG00010020321 BRWD1 (ENSUPAG00010020246) ##22 ETS2 (ENSUPAG00010020230) ERG (ENSUPAG00010020197) KCNJ15 (ENSUPAG00010020189) KCNJ6 (ENSUPAG00010020183) DYRK1A (ENSUPAG00010020176) VPS26C (ENSUPAG00010020169) Rodentia_B ANCESTRAL SPECIES 2 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 422 Tmprss2 (ENSDORG00000003340) ENSDORG00000003337 Fam3b (ENSDORG00000011095) ENSDORG00000027605 Bace2 (ENSDORG00000010948) ENSDORG00000030205 Dscam (ENSDORG00000002348) ENSDORG00000025922 ENSDORG00000007355 Igsf5 (ENSDORG00000005042) B3galt5 (ENSDORG00000027270) ENSDORG00000010100 Lca5l (ENSDORG00000016061) ENSDORG00000023446 Hmgn1 (ENSDORG00000024516) ENSDORG00000023919 ##22 ENSDORG00000028290 ##22 Psmg1 (ENSDORG00000024369) Ets2 (ENSDORG00000006046) Kangaroo rat MODERN SPECIES 422 ENSDORG00000003337 Fam3b (ENSDORG00000011095) ENSDORG00000027605 Bace2 (ENSDORG00000010948) ENSDORG00000030205 Dscam (ENSDORG00000002348) ENSDORG00000025922 ENSDORG00000007355 Igsf5 (ENSDORG00000005042) B3galt5 (ENSDORG00000027270) ENSDORG00000010100 Lca5l (ENSDORG00000016061) ENSDORG00000023446 Hmgn1 (ENSDORG00000024516) ENSDORG00000023919 ##22 ENSDORG00000028290 ##22 Psmg1 (ENSDORG00000024369) Ets2 (ENSDORG00000006046) Myomorpha ANCESTRAL SPECIES 14 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01090000259987.a.a.a.d ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 54 Prdm15 (ENSJJAG00000016457) Ripk4 (ENSJJAG00000023752) Tmprss2 (ENSJJAG00000021090) ENSJJAG00000023808 ENSJJAG00000023642 ENSJJAG00000012773 Bace2 (ENSJJAG00000006557) Dscam (ENSJJAG00000010430) ENSJJAG00000013366 Igsf5 (ENSJJAG00000000540) ENSJJAG00000018659 Lca5l (ENSJJAG00000017192) ENSJJAG00000014499 ENSJJAG00000013400 ENSJJAG00000010871 ##22 ENSJJAG00000014608 ##22 Psmg1 (ENSJJAG00000000631) Ets2 (ENSJJAG00000000366) Erg (ENSJJAG00000024273) Kcnj15 (ENSJJAG00000016880) Kcnj6 (ENSJJAG00000010439) Dyrk1a (ENSJJAG00000022874) Vps26c (ENSJJAG00000012735) ENSJJAG00000018355 ENSJJAG00000011573 ENSJJAG00000022631 Ripply3 (ENSJJAG00000014562) ENSJJAG00000022662 Sim2 (ENSJJAG00000010920) Cldn14 (ENSJJAG00000012260) Chaf1b (ENSJJAG00000019129) Lesser Egyptian jerboa MODERN SPECIES 54 C2cd2 (ENSJJAG00000016581) Prdm15 (ENSJJAG00000016457) Ripk4 (ENSJJAG00000023752) Tmprss2 (ENSJJAG00000021090) ENSJJAG00000023808 ENSJJAG00000023642 ENSJJAG00000012773 Bace2 (ENSJJAG00000006557) Dscam (ENSJJAG00000010430) ENSJJAG00000013366 Igsf5 (ENSJJAG00000000540) ENSJJAG00000018659 Lca5l (ENSJJAG00000017192) ENSJJAG00000014499 ENSJJAG00000013400 ENSJJAG00000010871 ##22 ENSJJAG00000014608 ##22 Psmg1 (ENSJJAG00000000631) Ets2 (ENSJJAG00000000366) Erg (ENSJJAG00000024273) Kcnj15 (ENSJJAG00000016880) Kcnj6 (ENSJJAG00000010439) Dyrk1a (ENSJJAG00000022874) Vps26c (ENSJJAG00000012735) ENSJJAG00000018355 ENSJJAG00000011573 ENSJJAG00000022631 Ripply3 (ENSJJAG00000014562) ENSJJAG00000022662 Sim2 (ENSJJAG00000010920) Cldn14 (ENSJJAG00000012260) Muroidea ANCESTRAL SPECIES 11 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00950000183004.a.b.a.b ENSGT00940000155686 ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01090000259987.a.a.a.d ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 531 Dscam (ENSNGAG00000019173) ENSNGAG00000016455 Igsf5 (ENSNGAG00000008533) B3galt5 (ENSNGAG00000004051) ENSNGAG00000001301 Lca5l (ENSNGAG00000013269) ENSNGAG00000009726 Hmgn1 (ENSNGAG00000004731) ENSNGAG00000001381 ##22 ENSNGAG00000000424 ##22 Psmg1 (ENSNGAG00000018513) Ets2 (ENSNGAG00000017753) Erg (ENSNGAG00000019090) Kcnj15 (ENSNGAG00000012200) Upper Galilee mountains blind mole rat MODERN SPECIES 531 Dscam (ENSNGAG00000019173) ENSNGAG00000016455 Igsf5 (ENSNGAG00000008533) B3galt5 (ENSNGAG00000004051) ENSNGAG00000001301 Lca5l (ENSNGAG00000013269) ENSNGAG00000009726 Hmgn1 (ENSNGAG00000004731) ENSNGAG00000001381 ##22 ENSNGAG00000000424 ##22 Psmg1 (ENSNGAG00000018513) Ets2 (ENSNGAG00000017753) Erg (ENSNGAG00000019090) Kcnj15 (ENSNGAG00000012200) Muroidea_A ANCESTRAL SPECIES 17 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.i ENSGT00950000183004.a.b.a.b ENSGT00940000155686.j ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01090000259987.a.a.a.d ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Cricetidae ANCESTRAL SPECIES 16 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.i ENSGT00950000183004.a.b.a.b ENSGT00940000155686.j ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01090000259987.a.a.a.d ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Cricetinae ANCESTRAL SPECIES 10 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.i ENSGT00950000183004.a.b.a.b ENSGT00940000155686.j ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 659 C2cd2 (ENSMAUG00000013544) Prdm15 (ENSMAUG00000013730) Ripk4 (ENSMAUG00000017222) Tmprss2 (ENSMAUG00000018948) Mx2 (ENSMAUG00000016913) Fam3b (ENSMAUG00000018355) Mx1 (ENSMAUG00000000088) Bace2 (ENSMAUG00000018970) Dscam (ENSMAUG00000002565) ENSMAUG00000001783 Igsf5 (ENSMAUG00000018757) ENSMAUG00000001722 Lca5l (ENSMAUG00000001467) ENSMAUG00000008620 Hmgn1 (ENSMAUG00000009433) ENSMAUG00000005957 ##22 ENSMAUG00000004019 ##22 Psmg1 (ENSMAUG00000014265) Ets2 (ENSMAUG00000012072) Erg (ENSMAUG00000012151) Kcnj15 (ENSMAUG00000009656) Kcnj6 (ENSMAUG00000011546) Dyrk1a (ENSMAUG00000018415) ENSMAUG00000007378 ENSMAUG00000008161 Pigp (ENSMAUG00000010045) Ripply3 (ENSMAUG00000017474) Hlcs (ENSMAUG00000000186) Sim2 (ENSMAUG00000012299) Cldn14 (ENSMAUG00000016301) Chaf1b (ENSMAUG00000010565) Golden Hamster MODERN SPECIES 659 Prdm15 (ENSMAUG00000013730) Ripk4 (ENSMAUG00000017222) Tmprss2 (ENSMAUG00000018948) Mx2 (ENSMAUG00000016913) Fam3b (ENSMAUG00000018355) Mx1 (ENSMAUG00000000088) Bace2 (ENSMAUG00000018970) Dscam (ENSMAUG00000002565) ENSMAUG00000001783 Igsf5 (ENSMAUG00000018757) ENSMAUG00000001722 Lca5l (ENSMAUG00000001467) ENSMAUG00000008620 Hmgn1 (ENSMAUG00000009433) ENSMAUG00000005957 ##22 ENSMAUG00000004019 ##22 Psmg1 (ENSMAUG00000014265) Ets2 (ENSMAUG00000012072) Erg (ENSMAUG00000012151) Kcnj15 (ENSMAUG00000009656) Kcnj6 (ENSMAUG00000011546) Dyrk1a (ENSMAUG00000018415) ENSMAUG00000007378 ENSMAUG00000008161 Pigp (ENSMAUG00000010045) Ripply3 (ENSMAUG00000017474) Hlcs (ENSMAUG00000000186) Sim2 (ENSMAUG00000012299) Cldn14 (ENSMAUG00000016301) Chaf1b (ENSMAUG00000010565) Morc3 (ENSMAUG00000010895) Chinese hamster chok1gshd MODERN SPECIES 382 ENSCGRG00001011892 Tmprss2 (ENSCGRG00001008718) Mx2 (ENSCGRG00001004304) Fam3b (ENSCGRG00001021679) Mx1 (ENSCGRG00001009938) Bace2 (ENSCGRG00001006826) Dscam (ENSCGRG00001020907) ENSCGRG00001011223 Igsf5 (ENSCGRG00001017358) B3galt5 (ENSCGRG00001003465) ENSCGRG00001018634 Lca5l (ENSCGRG00001001508) ENSCGRG00001008454 ENSCGRG00001015026 Hmgn1 (ENSCGRG00001006425) Brwd1 (ENSCGRG00001019901) ##22 Psmg1 (ENSCGRG00001023463) Ets2 (ENSCGRG00001019241) Erg (ENSCGRG00001005751) Kcnj15 (ENSCGRG00001014785) Kcnj6 (ENSCGRG00001008563) Dyrk1a (ENSCGRG00001000504) Vps26c (ENSCGRG00001014527) Ttc3 (ENSCGRG00001022857) ENSCGRG00001016611 Ripply3 (ENSCGRG00001015129) Hlcs (ENSCGRG00001019608) Sim2 (ENSCGRG00001015882) Cldn14 (ENSCGRG00001011829) Chaf1b (ENSCGRG00001012715) Morc3 (ENSCGRG00001017226) Cricetidae_B ANCESTRAL SPECIES 13 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.i ENSGT00950000183004.a.b.a.b ENSGT00940000155686.j ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01090000259987.a.a.a.d ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 7 Golgb1 (ENSMOCG00000009516) Kpna1 (ENSMOCG00000006140) Parp9 (ENSMOCG00000015450) Or4a72 (ENSMOCG00000003943) Or4a68 (ENSMOCG00000003063) Or4a2 (ENSMOCG00000009982) ENSMOCG00000007303 Or4c117 (ENSMOCG00000022094) ENSMOCG00000012887 ENSMOCG00000000644 Lca5l (ENSMOCG00000008785) ENSMOCG00000016062 ENSMOCG00000018055 ENSMOCG00000016951 ENSMOCG00000005141 ##22 ENSMOCG00000017915 ##22 Psmg1 (ENSMOCG00000019906) Ets2 (ENSMOCG00000011500) Erg (ENSMOCG00000016605) Kcnj15 (ENSMOCG00000022139) Kcnj6 (ENSMOCG00000021427) Dyrk1a (ENSMOCG00000021125) Vps26c (ENSMOCG00000001783) Ttc3 (ENSMOCG00000016472) Pigp (ENSMOCG00000018412) Ripply3 (ENSMOCG00000018664) ENSMOCG00000005338 Hlcs (ENSMOCG00000021140) Sim2 (ENSMOCG00000009487) Cldn14 (ENSMOCG00000014070) Chaf1b (ENSMOCG00000016730) Prairie vole MODERN SPECIES 7 Iqcb1 (ENSMOCG00000018317) Golgb1 (ENSMOCG00000009516) Kpna1 (ENSMOCG00000006140) Parp9 (ENSMOCG00000015450) Or4a72 (ENSMOCG00000003943) Or4a68 (ENSMOCG00000003063) Or4a2 (ENSMOCG00000009982) ENSMOCG00000007303 Or4c117 (ENSMOCG00000022094) ENSMOCG00000012887 ENSMOCG00000000644 Lca5l (ENSMOCG00000008785) ENSMOCG00000016062 ENSMOCG00000018055 ENSMOCG00000016951 ENSMOCG00000005141 ##22 ENSMOCG00000017915 ##22 Psmg1 (ENSMOCG00000019906) Ets2 (ENSMOCG00000011500) Erg (ENSMOCG00000016605) Kcnj15 (ENSMOCG00000022139) Kcnj6 (ENSMOCG00000021427) Dyrk1a (ENSMOCG00000021125) Vps26c (ENSMOCG00000001783) Ttc3 (ENSMOCG00000016472) Pigp (ENSMOCG00000018412) Ripply3 (ENSMOCG00000018664) ENSMOCG00000005338 Hlcs (ENSMOCG00000021140) Sim2 (ENSMOCG00000009487) Cldn14 (ENSMOCG00000014070) Northern American deer mouse MODERN SPECIES 3 ENSPEMG00000024660 ENSPEMG00000027181 ENSPEMG00000014739 Fam3b (ENSPEMG00000017357) ENSPEMG00000015989 Bace2 (ENSPEMG00000015582) Dscam (ENSPEMG00000013979) ENSPEMG00000029164 Itgb2l (ENSPEMG00000009654) Igsf5 (ENSPEMG00000007617) B3galt5 (ENSPEMG00000006922) ENSPEMG00000003252 Lca5l (ENSPEMG00000020214) ENSPEMG00000027492 ENSPEMG00000020156 Brwd1 (ENSPEMG00000014898) ##22 Psmg1 (ENSPEMG00000010416) ENSPEMG00000031015 Ets2 (ENSPEMG00000012273) Erg (ENSPEMG00000008582) Kcnj15 (ENSPEMG00000001507) Kcnj6 (ENSPEMG00000000223) Dyrk1a (ENSPEMG00000017620) Vps26c (ENSPEMG00000016213) Ttc3 (ENSPEMG00000024827) Pigp (ENSPEMG00000014214) Ripply3 (ENSPEMG00000013694) Hlcs (ENSPEMG00000013311) Sim2 (ENSPEMG00000012087) Cldn14 (ENSPEMG00000011575) Chaf1b (ENSPEMG00000011223) Murinae ANCESTRAL SPECIES 13 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.i ENSGT00950000183004.a.b.a.b ENSGT00940000155686.j ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01090000259987.a.a.a.d ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Rat MODERN SPECIES 2 Tmprss2 (ENSRNOG00000001976) Mx2 (ENSRNOG00000001963) Fam3b (ENSRNOG00000001962) Mx1 (ENSRNOG00000001959) Bace2 (ENSRNOG00000001953) Dscam (ENSRNOG00000027992) Pcp4 (ENSRNOG00000001628) ENSRNOG00000063024 Igsf5 (ENSRNOG00000028216) B3galt5 (ENSRNOG00000030983) Sh3bgr (ENSRNOG00000028238) Lca5l (ENSRNOG00000028248) Get1 (ENSRNOG00000001629) Hmgn1 (ENSRNOG00000048226) ENSRNOG00000067977 Brwd1 (ENSRNOG00000001632) ##22 Psmg1 (ENSRNOG00000001643) Ets2 (ENSRNOG00000001647) Erg (ENSRNOG00000001652) Kcnj15 (ENSRNOG00000062944) Kcnj6 (ENSRNOG00000001658) Dyrk1a (ENSRNOG00000001662) Vps26c (ENSRNOG00000001681) Ttc3 (ENSRNOG00000001682) Pigp (ENSRNOG00000039850) Ripply3 (ENSRNOG00000001684) LOC108352309 (ENSRNOG00000065104) Hlcs (ENSRNOG00000001686) Sim2 (ENSRNOG00000054203) Cldn14 (ENSRNOG00000001691) Chaf1b (ENSRNOG00000001692) Mus ANCESTRAL SPECIES 13 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.i ENSGT00950000183004.a.b.a.b ENSGT00940000155686.j ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01090000259987.a.a.a.d ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Mus_A ANCESTRAL SPECIES 18 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.i ENSGT00950000183004.a.b.a.b ENSGT00940000155686.j ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01090000259987.a.a.a.d ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.u.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Mus_B ANCESTRAL SPECIES 18 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.i ENSGT00950000183004.a.b.a.b ENSGT00940000155686.j ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01090000259987.a.a.a.d ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.u.a ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Mouse MODERN SPECIES 7 Tmprss2 (ENSMUSG00000000385) Mx2 (ENSMUSG00000023341) Fam3b (ENSMUSG00000022938) Mx1 (ENSMUSG00000000386) Bace2 (ENSMUSG00000040605) Dscam (ENSMUSG00000050272) Pcp4 (ENSMUSG00000090223) Itgb2l (ENSMUSG00000000157) Gm49948 (ENSMUSG00000117081) Igsf5 (ENSMUSG00000000159) B3galt5 (ENSMUSG00000074892) Sh3bgr (ENSMUSG00000040666) Lca5l (ENSMUSG00000045275) Get1 (ENSMUSG00000023147) Hmgn1 (ENSMUSG00000040681) Brwd1 (ENSMUSG00000022914) ##22 Psmg1 (ENSMUSG00000022913) Ets2 (ENSMUSG00000022895) Erg (ENSMUSG00000040732) Kcnj15 (ENSMUSG00000062609) Kcnj6 (ENSMUSG00000043301) Dyrk1a (ENSMUSG00000022897) Vps26c (ENSMUSG00000022898) Ttc3 (ENSMUSG00000040785) Pigp (ENSMUSG00000022940) Ripply3 (ENSMUSG00000022941) Hlcs (ENSMUSG00000040820) Sim2 (ENSMUSG00000062713) Cldn14 (ENSMUSG00000047109) Chaf1b (ENSMUSG00000022945) Morc3 (ENSMUSG00000039456) Mus_C ANCESTRAL SPECIES 12 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.i ENSGT00950000183004.a.b.a.b ENSGT00940000155686.j ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT01090000259987.a.a.a.d ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.u.a ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Steppe mouse MODERN SPECIES 3075 Dscam (ENSMSIG00000014580) ENSMSIG00000014678 Itgb2l (ENSMSIG00000014689) Igsf5 (ENSMSIG00000014791) B3galt5 (ENSMSIG00000014879) Sh3bgr (ENSMSIG00000014902) Lca5l (ENSMSIG00000014966) ENSMSIG00000015019 ENSMSIG00000015102 Brwd1 (ENSMSIG00000015168) ##22 Psmg1 (ENSMSIG00000015643) Ets2 (ENSMSIG00000015834) Erg (ENSMSIG00000015868) Ryukyu mouse MODERN SPECIES 7 Prdm15 (MGP_CAROLIEiJ_G0021012) Ripk4 (MGP_CAROLIEiJ_G0021011) MGP_CAROLIEiJ_G0008949 Fam3b (MGP_CAROLIEiJ_G0021010) MGP_CAROLIEiJ_G0021009 Bace2 (MGP_CAROLIEiJ_G0021008) Dscam (MGP_CAROLIEiJ_G0021007) MGP_CAROLIEiJ_G0021006 Itgb2l (MGP_CAROLIEiJ_G0021005) Igsf5 (MGP_CAROLIEiJ_G0021004) B3galt5 (MGP_CAROLIEiJ_G0021003) MGP_CAROLIEiJ_G0021002 Lca5l (MGP_CAROLIEiJ_G0021001) MGP_CAROLIEiJ_G0021000 MGP_CAROLIEiJ_G0020999 Brwd1 (MGP_CAROLIEiJ_G0020998) ##22 Psmg1 (MGP_CAROLIEiJ_G0020997) Ets2 (MGP_CAROLIEiJ_G0020996) Erg (MGP_CAROLIEiJ_G0020995) Kcnj15 (MGP_CAROLIEiJ_G0020994) Kcnj6 (MGP_CAROLIEiJ_G0020993) Dyrk1a (MGP_CAROLIEiJ_G0020992) Vps26c (MGP_CAROLIEiJ_G0020991) Ttc3 (MGP_CAROLIEiJ_G0020990) MGP_CAROLIEiJ_G0020989 Ripply3 (MGP_CAROLIEiJ_G0020988) Hlcs (MGP_CAROLIEiJ_G0020987) Sim2 (MGP_CAROLIEiJ_G0020986) Cldn14 (MGP_CAROLIEiJ_G0020985) MGP_CAROLIEiJ_G0020984 Morc3 (MGP_CAROLIEiJ_G0020983) Shrew mouse MODERN SPECIES 3 Ripk4 (MGP_PahariEiJ_G0016717) Tmprss2 (MGP_PahariEiJ_G0016716) MGP_PahariEiJ_G0008412 Fam3b (MGP_PahariEiJ_G0016715) MGP_PahariEiJ_G0016714 Bace2 (MGP_PahariEiJ_G0016713) Dscam (MGP_PahariEiJ_G0016712) MGP_PahariEiJ_G0016711 Itgb2l (MGP_PahariEiJ_G0016710) Igsf5 (MGP_PahariEiJ_G0016709) B3galt5 (MGP_PahariEiJ_G0016708) MGP_PahariEiJ_G0016707 Lca5l (MGP_PahariEiJ_G0016706) MGP_PahariEiJ_G0016705 MGP_PahariEiJ_G0016704 MGP_PahariEiJ_G0016703 ##22 Psmg1 (MGP_PahariEiJ_G0016702) Ets2 (MGP_PahariEiJ_G0016701) Erg (MGP_PahariEiJ_G0016700) Kcnj15 (MGP_PahariEiJ_G0016699) Kcnj6 (MGP_PahariEiJ_G0016698) Dyrk1a (MGP_PahariEiJ_G0016697) Vps26c (MGP_PahariEiJ_G0016696) MGP_PahariEiJ_G0016695 MGP_PahariEiJ_G0016694 Ripply3 (MGP_PahariEiJ_G0016693) Hlcs (MGP_PahariEiJ_G0016692) Sim2 (MGP_PahariEiJ_G0016691) Cldn14 (MGP_PahariEiJ_G0016690) Chaf1b (MGP_PahariEiJ_G0016689) Morc3 (MGP_PahariEiJ_G0016688) Primates ANCESTRAL SPECIES 1 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00390000011549 ENSGT00950000182802.A.a.a ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Haplorrhini ANCESTRAL SPECIES 22 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00390000011549 ENSGT00950000182802.A.a.a ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Tarsier MODERN SPECIES 4129 KERA (ENSTSYG00000010206) EPYC (ENSTSYG00000010156) BRWD1 (ENSTSYG00000010572) ##22 PSMG1 (ENSTSYG00000010512) ETS2 (ENSTSYG00000011695) ERG (ENSTSYG00000000636) KCNJ15 (ENSTSYG00000000921) Simiiformes ANCESTRAL SPECIES 1 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00390000011549 ENSGT00950000182802.A.a.a.e.a.a.a ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00910000147159 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Catarrhini DUPLICATION Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 3 ENSGT00510000049215 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630 ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.b.a ENSGT01030000234531.A.b.b.b.b.b.f.b ENSGT01030000234531.A.b.b.b.b.b.e.b.b ENSGT01030000234531.A.b.b.b.a.e ENSGT01030000234531.A.b.b.b.b.b.f.a ENSGT01030000234531.A.b.b.b.b.b.e.a ENSGT01030000234531.A.b.b.b.a.f ENSGT00940000162571 ENSGT00950000183107.a.b.a.tb.a ##22 ENSGT00390000000013 ENSGT00940000159410 ENSGT00940000154570.b ENSGT00390000009776.j.b ENSGT00390000009278 ENSGT00940000154171.A ENSGT00390000012058.c.b ENSGT00940000153216.a.b ENSGT01030000234528.B.a.a.pb ENSGT01030000234528.B.a.a.qb ENSGT00940000159698 ENSGT00940000155851 ENSGT00950000183195.a ENSGT00950000182999.a.a ENSGT00390000005744 Hominoidea ANCESTRAL SPECIES 3 ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630 ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.b.a.e ENSGT01030000234531.A.b.b.b.b.b.f.a.a.b ENSGT01030000234531.A.b.b.b.a.e.a ENSGT01030000234531.A.b.b.b.b.b.e.b.b.b ENSGT01030000234531.A.b.b.b.a.e.b ENSGT01030000234531.A.b.b.b.b.b.f.a.a.a ENSGT01030000234531.A.b.b.b.b.b.e.a ENSGT01030000234531.A.b.b.b.a.f ENSGT00940000162571 ENSGT00950000183107.a.b.a.tb.a ##22 ENSGT00390000000013 ENSGT00940000159410 ENSGT00940000154570.b ENSGT00390000009278 ENSGT00940000154171.A ENSGT00390000012058.c.b ENSGT00940000153216.a.b ENSGT01030000234528.B.a.a.pb ENSGT01030000234528.B.a.a.qb ENSGT00940000159698 ENSGT00940000155851 ENSGT00950000183195.a ENSGT00950000182999.a.a ENSGT00390000005744 ENSGT00390000015175 Hominidae ANCESTRAL SPECIES 3 ENSGT00940000158724 ENSGT00940000157630 ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.b.a.e ENSGT01030000234531.A.b.b.b.b.b.f.b ENSGT01030000234531.A.b.b.b.b.b.e.b.b.a ENSGT01030000234531.A.b.b.b.b.a.f ENSGT01030000234531.A.b.b.b.b.b.f.a.a.a ENSGT01030000234531.A.b.b.b.a.e.b.b ENSGT01030000234531.A.b.b.b.b.b.f.a.b ENSGT01030000234531.A.b.b.b.b.b.e.a ENSGT01030000234531.A.b.b.b.b.b.e.b.b.b ENSGT01030000234531.A.b.b.b.a.f ENSGT00940000162571 ENSGT00950000183107.a.b.a.tb.a ##22 ENSGT00390000000013 ENSGT00940000159410 ENSGT00940000154570.b ENSGT00390000009278 ENSGT00940000154171.A ENSGT00390000012058.c.b ENSGT00940000153216.a.b ENSGT01030000234528.B.a.a.pb ENSGT01030000234528.B.a.a.qb ENSGT00940000159698 ENSGT00940000155851 ENSGT00950000183195.a ENSGT00950000182999.a.a ENSGT00390000005744 ENSGT00390000015175 Homo/Pan/Gorilla group ANCESTRAL SPECIES 3 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630 ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.b.a.e ENSGT01030000234531.A.b.b.b.b.b.f.a.a.b ENSGT01030000234531.A.b.b.b.a.e.a ENSGT00940000153402.c.b.a.b.a.a ENSGT01030000234531.A.b.b.b.a.e.b.b.c ENSGT01030000234531.A.b.b.b.b.b.f.a.a.a.b.a ENSGT01030000234531.A.b.b.b.b.b.e.a.b ENSGT01030000234531.A.b.b.b.b.b.e.b.b.b ENSGT01030000234531.A.b.b.b.a.f ENSGT00940000162571 ENSGT00950000183107.a.b.a.tb.a ##22 ENSGT00390000000013 ENSGT00940000159410 ENSGT00390000009710.p.a ENSGT00940000154570.b ENSGT00940000167437.a ENSGT00390000009776.j.b ENSGT00390000009278 ENSGT00940000154171.A ENSGT00390000012058.c.b ENSGT00940000153216.a.b ENSGT01030000234528.B.a.a.pb ENSGT01030000234528.B.a.a.qb ENSGT00940000159698 ENSGT00940000155851 ENSGT00950000183195.a Homo/Pan group ANCESTRAL SPECIES 4 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000157630 ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.b.a.e ENSGT01030000234531.A.b.b.b.b.b.f.a.a.b ENSGT01030000234531.A.b.b.b.a.e.a ENSGT00940000153402.c.b.a.b.a.a.d ENSGT01030000234531.A.b.b.b.a.e.b.b.c ENSGT01030000234531.A.b.b.b.b.b.f.a.a.a.b.a ENSGT01030000234531.A.b.b.b.b.b.e.a.b ENSGT01030000234531.A.b.b.b.b.b.e.b.b.b ENSGT01030000234531.A.b.b.b.a.f ENSGT00940000162571 ENSGT00950000183107.a.b.a.tb.a ##22 ENSGT00390000000013 ENSGT00940000159410 ENSGT00390000009710.p.a ENSGT00940000154570.b ENSGT00940000167437.a ENSGT00390000009776.j.b ENSGT00390000009278 ENSGT00940000154171.A ENSGT00390000012058.c.b ENSGT00940000153216.a.b ENSGT01030000234528.B.a.a.pb ENSGT01030000234528.B.a.a.qb ENSGT00940000159698 ENSGT00940000155851 ENSGT00950000183195.a Pan ANCESTRAL SPECIES ENSGT00940000161800 ENSGT00950000183083.b ENSGT00940000158724 ENSGT00940000163565 ENSGT00940000157630 ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.b.a.e ENSGT01030000234531.A.b.b.b.b.b.f.a.a.b ENSGT01030000234531.A.b.b.b.a.e.a ENSGT01030000234531.A.b.b.b.b.b.f.a.b ENSGT01030000234531.A.b.b.b.b.b.e.a.b ENSGT01030000234531.A.b.b.b.b.b.e.b.b.b ENSGT01030000234531.A.b.b.b.a.f ENSGT00940000162571 ENSGT00950000183107.a.b.a.tb.a ##22 ENSGT00390000000013 ENSGT00940000159410 ENSGT00390000009710.p.a ENSGT00940000154570.b ENSGT00940000167437.a ENSGT00390000009776.j.b ENSGT00390000009278 ENSGT00940000154171.A ENSGT00390000012058.c.b ENSGT00940000153216.a.b ENSGT01030000234528.B.a.a.pb ENSGT01030000234528.B.a.a.qb ENSGT00940000159698 ENSGT00940000155851 ENSGT00950000183195.a Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES TNFRSF1B (ENSPTRG00000000164) VPS13D (ENSPTRG00000000165) DHRS3 (ENSPTRG00000000167) AADACL4 (ENSPTRG00000030826) AADACL3 (ENSPTRG00000000168) CFAP107 (ENSPTRG00000000170) PRAMEF12 (ENSPTRG00000030821) ENSPTRG00000031360 ENSPTRG00000030818 ENSPTRG00000030823 ENSPTRG00000030824 PRAMEF19 (ENSPTRG00000030819) PRAMEF17 (ENSPTRG00000030820) PRAMEF20 (ENSPTRG00000041322) LRRC38 (ENSPTRG00000000182) ENSPTRG00000042868 ##22 PDPN (ENSPTRG00000000184) PRDM2 (ENSPTRG00000000185) KAZN (ENSPTRG00000000186) ENSPTRG00000049061 ENSPTRG00000030816 ENSPTRG00000048250 TMEM51 (ENSPTRG00000000193) FHAD1 (ENSPTRG00000000194) EFHD2 (ENSPTRG00000050778) CTRC (ENSPTRG00000000197) CELA2A (ENSPTRG00000034262) CELA2B (ENSPTRG00000049760) CASP9 (ENSPTRG00000000200) DNAJC16 (ENSPTRG00000000201) AGMAT (ENSPTRG00000000202) Chimpanzee MODERN SPECIES 964 ENSPTRG00000051951 ##22 Bonobo MODERN SPECIES PLOD1 (ENSPPAG00000034724) MFN2 (ENSPPAG00000028131) MIIP (ENSPPAG00000028466) TNFRSF8 (ENSPPAG00000033492) TNFRSF1B (ENSPPAG00000033471) VPS13D (ENSPPAG00000033746) DHRS3 (ENSPPAG00000043366) ENSPPAG00000043843 CFAP107 (ENSPPAG00000033402) PRAMEF12 (ENSPPAG00000038324) ENSPPAG00000030003 ENSPPAG00000013902 PRAMEF17 (ENSPPAG00000027375) PRAMEF20 (ENSPPAG00000034456) LRRC38 (ENSPPAG00000027892) ENSPPAG00000030116 ##22 ENSPPAG00000039265 PRDM2 (ENSPPAG00000036677) KAZN (ENSPPAG00000007694) ENSPPAG00000030734 ENSPPAG00000009276 TMEM51 (ENSPPAG00000027626) FHAD1 (ENSPPAG00000013425) EFHD2 (ENSPPAG00000029402) CTRC (ENSPPAG00000033889) CELA2A (ENSPPAG00000030039) CELA2B (ENSPPAG00000041434) CASP9 (ENSPPAG00000043312) DNAJC16 (ENSPPAG00000038752) AGMAT (ENSPPAG00000027720) DDI2 (ENSPPAG00000038331) Gorilla MODERN SPECIES ENSGGOG00000027904 ENSGGOG00000002004 ENSGGOG00000002005 ENSGGOG00000024298 ENSGGOG00000009211 ENSGGOG00000002008 ENSGGOG00000023201 PRAMEF18 (ENSGGOG00000027485) ENSGGOG00000040856 ENSGGOG00000001999 ENSGGOG00000025050 ENSGGOG00000027127 PRAMEF17 (ENSGGOG00000002014) ENSGGOG00000023851 LRRC38 (ENSGGOG00000003598) ENSGGOG00000006226 ##22 ENSGGOG00000010242 PRDM2 (ENSGGOG00000005678) KAZN (ENSGGOG00000013613) ENSGGOG00000038135 ENSGGOG00000007474 TMEM51 (ENSGGOG00000028096) FHAD1 (ENSGGOG00000000691) EFHD2 (ENSGGOG00000006667) CTRC (ENSGGOG00000006673) CELA2A (ENSGGOG00000013964) CELA2B (ENSGGOG00000036765) CASP9 (ENSGGOG00000001961) DNAJC16 (ENSGGOG00000002611) AGMAT (ENSGGOG00000015172) ENSGGOG00000028428 Orangutan MODERN SPECIES ENSPPYG00000001862 ENSPPYG00000010673 ENSPPYG00000010650 ENSPPYG00000032923 ENSPPYG00000041518 ENSPPYG00000037430 ENSPPYG00000040014 ENSPPYG00000036925 ENSPPYG00000038915 ENSPPYG00000030931 ENSPPYG00000031128 ENSPPYG00000001860 ENSPPYG00000035652 ENSPPYG00000030098 LRRC38 (ENSPPYG00000010676) ENSPPYG00000001857 ##22 ENSPPYG00000001856 PRDM2 (ENSPPYG00000001855) KAZN (ENSPPYG00000001854) ENSPPYG00000001850 FHAD1 (ENSPPYG00000001848) EFHD2 (ENSPPYG00000036146) CTRC (ENSPPYG00000001846) CELA2A (ENSPPYG00000034416) ENSPPYG00000010674 CELA2B (ENSPPYG00000001845) CASP9 (ENSPPYG00000001844) DNAJC16 (ENSPPYG00000001843) AGMAT (ENSPPYG00000001842) DDI2 (ENSPPYG00000001841) RSC1A1 (ENSPPYG00000031265) Gibbon MODERN SPECIES 16 DHRS3 (ENSNLEG00000009838) ENSNLEG00000009845 AADACL3 (ENSNLEG00000034520) CFAP107 (ENSNLEG00000009848) ENSNLEG00000033314 ENSNLEG00000030346 ENSNLEG00000009851 ENSNLEG00000031836 ENSNLEG00000036088 ENSNLEG00000009861 ENSNLEG00000009866 ENSNLEG00000009870 ENSNLEG00000009879 PRAMEF20 (ENSNLEG00000009881) LRRC38 (ENSNLEG00000009883) ENSNLEG00000032775 ##22 ENSNLEG00000036224 PRDM2 (ENSNLEG00000009887) KAZN (ENSNLEG00000007579) ENSNLEG00000009890 ENSNLEG00000032060 TMEM51 (ENSNLEG00000007586) FHAD1 (ENSNLEG00000007592) EFHD2 (ENSNLEG00000007602) CTRC (ENSNLEG00000007606) CELA2A (ENSNLEG00000026921) CELA2B (ENSNLEG00000007611) CASP9 (ENSNLEG00000007614) DNAJC16 (ENSNLEG00000007619) AGMAT (ENSNLEG00000007628) DDI2 (ENSNLEG00000018559) Cercopithecidae ANCESTRAL SPECIES 2 ENSGT00940000163565 ENSGT00940000157630 ENSGT00940000162160 ENSGT00390000014553 ENSGT01030000234531.A.b.b.b.b.a ENSGT01030000234531.A.b.b.b.b.b.f.b ENSGT01030000234531.A.b.b.b.b.b.e.b.b.c ENSGT00940000153402.c.b.a.b.a.a ENSGT01030000234531.A.b.b.b.b.b.e.b.b.d ENSGT01030000234531.A.b.b.b.a.e ENSGT01030000234531.A.b.b.b.b.b.f.a ENSGT01030000234531.A.b.b.b.b.b.e.a ENSGT01030000234531.A.b.b.b.a.f ENSGT00940000163979 ENSGT00940000162571 ENSGT00950000183107.a.b.a.tb.a ##22 ENSGT00390000000013 ENSGT00940000159410 ENSGT00940000154570.b ENSGT00390000009776.j.b ENSGT00390000009278 ENSGT00940000154171.A ENSGT00390000012058.c.b ENSGT00940000153216.a.b ENSGT01030000234528.B.a.a.pb.c ENSGT01030000234528.B.a.a.qb ENSGT00940000159698 ENSGT00940000155851 ENSGT00950000183195.a ENSGT00950000182999.a.a ENSGT00390000005744 Rhinopithecus ANCESTRAL SPECIES 828 ENSGT00940000162571 ENSGT00950000183107.a.b.a.tb.a ##22 ENSGT00390000000013 Golden snub-nosed monkey MODERN SPECIES 2386 PRAMEF20 (ENSRROG00000018701) ENSRROG00000040679 ENSRROG00000032614 ##22 PDPN (ENSRROG00000032019) Black snub-nosed monkey MODERN SPECIES 321 PRAMEF20 (ENSRBIG00000041111) LRRC38 (ENSRBIG00000027758) ENSRBIG00000036603 ##22 PDPN (ENSRBIG00000030574) Catarrhini ANCESTRAL SPECIES 4 ENSGT00390000010491 ENSGT00540000070023.c.b.b ENSGT00940000155210.a.b ENSGT00940000156910 ENSGT00950000183185.c.a.a.t ENSGT00510000046843.b ENSGT00430000032851 ENSGT00430000033088 ENSGT00410000029301 ENSGT00950000182952.C ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ##22 ENSGT00940000158686 ENSGT00940000163607 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000158251 ENSGT00940000162858 ENSGT00940000163725 Hominoidea ANCESTRAL SPECIES 5 ENSGT00390000010491 ENSGT00540000070023.d ENSGT00940000155210.a.b ENSGT00940000156910 ENSGT00950000183185.c.a.a.t ENSGT00510000046843.b ENSGT00430000032851 ENSGT00430000033088 ENSGT00410000029301 ENSGT00950000182952.C ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ##22 ENSGT00940000158686 ENSGT00940000163607 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000158251 ENSGT00940000162858 ENSGT00940000163725 Hominidae ANCESTRAL SPECIES 4 ENSGT00940000157983 ENSGT00390000010491 ENSGT00540000070023.d ENSGT00940000155210.a.b ENSGT00940000156910 ENSGT00510000046843.b ENSGT00430000032851 ENSGT00430000033088 ENSGT00410000029301 ENSGT00950000182952.C ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ##22 ENSGT00940000158686 ENSGT00940000163607 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000158251 ENSGT00940000162858 ENSGT00940000163725 Homo/Pan/Gorilla group ANCESTRAL SPECIES 5 ENSGT00940000157983 ENSGT00390000010491 ENSGT00540000070023.d ENSGT00940000155210.a.b ENSGT00940000156910 ENSGT00510000046843.b ENSGT00430000032851 ENSGT00430000033088 ENSGT00410000029301 ENSGT00950000182952.C ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ##22 ENSGT00940000158686 ENSGT00940000163607 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.b ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000158251 ENSGT00940000162858 Homo/Pan group ANCESTRAL SPECIES 6 ENSGT00390000014448 ENSGT00940000157983 ENSGT00390000010491 ENSGT00540000070023.c.b.b ENSGT00940000155210.a.b ENSGT00940000156910 ENSGT00510000046843.b ENSGT00430000032851 ENSGT00410000029301 ENSGT00950000182952.C ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ##22 ENSGT00940000158686 ENSGT00940000163607 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.b ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000158251 ENSGT00940000162858 Pan ANCESTRAL SPECIES 4 ENSGT00940000157983 ENSGT00390000010491 ENSGT00540000070023.d ENSGT00940000155210.a.b ENSGT00440000033468.d ENSGT00940000156910 ENSGT00510000046843.b ENSGT00430000032851 ENSGT00410000029301 ENSGT00950000182952.C ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ##22 ENSGT00940000158686 ENSGT00390000016737.b ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.b ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000158251 ENSGT00940000162858 Chimpanzee MODERN SPECIES 3 SOCS2 (ENSPTRG00000005299) MRPL42 (ENSPTRG00000022791) UBE2N (ENSPTRG00000005297) NUDT4 (ENSPTRG00000005296) ENSPTRG00000048686 EEA1 (ENSPTRG00000005295) PLEKHG7 (ENSPTRG00000005292) C12H12orf74 (ENSPTRG00000033711) ENSPTRG00000029605 BTG1 (ENSPTRG00000050131) DCN (ENSPTRG00000005290) LUM (ENSPTRG00000005289) KERA (ENSPTRG00000005288) EPYC (ENSPTRG00000005287) CCER1 (ENSPTRG00000023775) ENSPTRG00000046703 ##22 ATP2B1 (ENSPTRG00000005286) ENSPTRG00000046518 POC1B (ENSPTRG00000005284) DUSP6 (ENSPTRG00000005282) KITLG (ENSPTRG00000005281) TMTC3 (ENSPTRG00000005280) CEP290 (ENSPTRG00000005278) C12H12orf29 (ENSPTRG00000005277) C12H12orf50 (ENSPTRG00000005276) ENSPTRG00000044899 MGAT4C (ENSPTRG00000045901) NTS (ENSPTRG00000005274) RASSF9 (ENSPTRG00000005273) ALX1 (ENSPTRG00000005272) LRRIQ1 (ENSPTRG00000005271) Bonobo MODERN SPECIES 3 ENSPPAG00000030048 SOCS2 (ENSPPAG00000040884) MRPL42 (ENSPPAG00000038254) ENSPPAG00000028330 ENSPPAG00000035362 ENSPPAG00000043536 EEA1 (ENSPPAG00000041822) ENSPPAG00000044085 ENSPPAG00000043982 BTG1 (ENSPPAG00000043618) DCN (ENSPPAG00000039448) LUM (ENSPPAG00000027479) KERA (ENSPPAG00000042356) EPYC (ENSPPAG00000029056) CCER1 (ENSPPAG00000003461) ENSPPAG00000017362 ##22 ATP2B1 (ENSPPAG00000044122) ENSPPAG00000014801 POC1B (ENSPPAG00000030897) DUSP6 (ENSPPAG00000028930) KITLG (ENSPPAG00000031443) TMTC3 (ENSPPAG00000040761) CEP290 (ENSPPAG00000027339) C12orf29 (ENSPPAG00000042620) C12orf50 (ENSPPAG00000035198) ENSPPAG00000043288 ENSPPAG00000020965 MGAT4C (ENSPPAG00000031798) NTS (ENSPPAG00000032540) RASSF9 (ENSPPAG00000019366) ALX1 (ENSPPAG00000034056) Gibbon MODERN SPECIES SOCS2 (ENSNLEG00000005710) MRPL42 (ENSNLEG00000005699) ENSNLEG00000005695 ENSNLEG00000005674 EEA1 (ENSNLEG00000005649) ENSNLEG00000029636 ENSNLEG00000005642 ENSNLEG00000005638 ENSNLEG00000005634 ENSNLEG00000005637 BTG1 (ENSNLEG00000029316) DCN (ENSNLEG00000005597) LUM (ENSNLEG00000005594) KERA (ENSNLEG00000005587) EPYC (ENSNLEG00000005578) ENSNLEG00000028183 ##22 ENSNLEG00000028489 ATP2B1 (ENSNLEG00000005548) POC1B (ENSNLEG00000034847) ENSNLEG00000032235 DUSP6 (ENSNLEG00000028083) KITLG (ENSNLEG00000005483) TMTC3 (ENSNLEG00000005456) CEP290 (ENSNLEG00000005417) C12orf29 (ENSNLEG00000005396) C12orf50 (ENSNLEG00000005395) MGAT4C (ENSNLEG00000005393) NTS (ENSNLEG00000005388) RASSF9 (ENSNLEG00000005386) ALX1 (ENSNLEG00000005381) LRRIQ1 (ENSNLEG00000005358) Cercopithecidae ANCESTRAL SPECIES 3 ENSGT00390000010491 ENSGT00540000070023.c.b.b ENSGT00940000155210.a.b ENSGT00940000156910 ENSGT00950000183185.c.a.a.t ENSGT00510000046843.b ENSGT00430000032851 ENSGT00430000033088 ENSGT00410000029301 ENSGT00950000182952.C.qc ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ##22 ENSGT00940000158686 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000158251 ENSGT00940000162858 ENSGT00940000163725 ENSGT00940000157277 Cercopithecinae ANCESTRAL SPECIES 7 ENSGT00390000010491 ENSGT00540000070023.c.b.b ENSGT00940000155210.a.b ENSGT00940000156910 ENSGT00950000183185.c.a.a.t ENSGT00510000046843.b ENSGT00430000032851 ENSGT00430000033088 ENSGT00410000029301 ENSGT00950000182952.C.qc ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ##22 ENSGT00940000158686 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000158251 ENSGT00940000162858 ENSGT00940000163725 ENSGT00940000157277 Cercopithecinae_a ANCESTRAL SPECIES 7 ENSGT00390000010491 ENSGT00540000070023.c.b.b ENSGT00940000155210.a.b ENSGT00940000156910 ENSGT00950000183185.c.a.a.t ENSGT00510000046843.b ENSGT00430000032851 ENSGT00410000029301 ENSGT00430000033088 ENSGT00950000182952.C.qc ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ##22 ENSGT00940000158686 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.b.b ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000153524.b.a.a.k.a ENSGT00940000158251 ENSGT00940000162858 Macaca ANCESTRAL SPECIES 6 ENSGT00390000010491 ENSGT00540000070023.c.b.b ENSGT00940000155210.a.b ENSGT00940000156910 ENSGT00950000183185.c.a.a.t ENSGT00510000046843.b ENSGT00430000032851 ENSGT00410000029301 ENSGT00430000033088 ENSGT00950000182952.C.qc ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ##22 ENSGT00940000158686 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.b.b ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000153524.b.a.a.k.a ENSGT00940000158251 ENSGT00940000162858 Pig-tailed macaque MODERN SPECIES 588 SOCS2 (ENSMNEG00000028971) MRPL42 (ENSMNEG00000028853) UBE2N (ENSMNEG00000040126) ENSMNEG00000039076 EEA1 (ENSMNEG00000002425) ENSMNEG00000035731 PLEKHG7 (ENSMNEG00000030654) ENSMNEG00000034688 ENSMNEG00000031694 ENSMNEG00000043272 BTG1 (ENSMNEG00000039231) DCN (ENSMNEG00000041455) LUM (ENSMNEG00000029372) KERA (ENSMNEG00000033316) EPYC (ENSMNEG00000038088) ENSMNEG00000029890 ##22 ENSMNEG00000029379 ATP2B1 (ENSMNEG00000042320) POC1B (ENSMNEG00000040128) DUSP6 (ENSMNEG00000042616) KITLG (ENSMNEG00000041931) TMTC3 (ENSMNEG00000000847) CEP290 (ENSMNEG00000041840) C12orf29 (ENSMNEG00000042920) C12orf50 (ENSMNEG00000030237) ENSMNEG00000044276 ENSMNEG00000032865 Macaca_a ANCESTRAL SPECIES 6 ENSGT00390000010491 ENSGT00540000070023.c.b.b ENSGT00940000155210.a.b ENSGT00940000164709.a.b.b.a.a.b.b.b.b.a.a.b.a ENSGT00940000156910 ENSGT00510000046843.b ENSGT00430000032851 ENSGT00410000029301 ENSGT00950000182952.C.qc ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.b.a.b ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ##22 ENSGT00940000158686 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.b.b ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000158251 ENSGT00940000162858 ENSGT00940000163725 Crab-eating macaque MODERN SPECIES 2 MRPL42 (ENSMFAG00000032330) ENSMFAG00000047633 ENSMFAG00000000379 ENSMFAG00000059302 ENSMFAG00000047787 ENSMFAG00000056451 EEA1 (ENSMFAG00000000038) PLEKHG7 (ENSMFAG00000034199) ENSMFAG00000003136 BTG1 (ENSMFAG00000055039) ENSMFAG00000058222 DCN (ENSMFAG00000037651) LUM (ENSMFAG00000036088) KERA (ENSMFAG00000041597) EPYC (ENSMFAG00000033919) ENSMFAG00000053136 ##22 ATP2B1 (ENSMFAG00000045257) POC1B (ENSMFAG00000043490) DUSP6 (ENSMFAG00000038546) KITLG (ENSMFAG00000054618) TMTC3 (ENSMFAG00000046285) CEP290 (ENSMFAG00000038682) C12orf29 (ENSMFAG00000032876) C12orf50 (ENSMFAG00000039647) ENSMFAG00000061681 ENSMFAG00000036902 ENSMFAG00000060498 ENSMFAG00000055661 ENSMFAG00000064001 ENSMFAG00000065083 MGAT4C (ENSMFAG00000044473) Rhesus MODERN SPECIES 2 NUDT4 (ENSMMUG00000064953) ENSMMUG00000050504 EEA1 (ENSMMUG00000002244) PLEKHG7 (ENSMMUG00000002243) ENSMMUG00000062773 ENSMMUG00000049117 BTG1 (ENSMMUG00000050631) ENSMMUG00000059975 ENSMMUG00000058404 ENSMMUG00000063287 DCN (ENSMMUG00000016997) LUM (ENSMMUG00000016995) KERA (ENSMMUG00000051017) EPYC (ENSMMUG00000011300) CCER1 (ENSMMUG00000010912) ENSMMUG00000000147 ##22 ATP2B1 (ENSMMUG00000023378) POC1B (ENSMMUG00000003574) DUSP6 (ENSMMUG00000054968) KITLG (ENSMMUG00000051340) TMTC3 (ENSMMUG00000015864) CEP290 (ENSMMUG00000015862) C11H12orf29 (ENSMMUG00000015860) C11H12orf50 (ENSMMUG00000015859) ENSMMUG00000031648 MGAT4C (ENSMMUG00000060394) NTS (ENSMMUG00000023155) RASSF9 (ENSMMUG00000058491) ENSMMUG00000037648 ENSMMUG00000052077 LRRIQ1 (ENSMMUG00000016535) Cercopithecinae_b ANCESTRAL SPECIES 2 ENSGT00540000070023.c.b.b ENSGT00940000155210.a.b ENSGT00940000156910 ENSGT00950000183185.c.a.a.t ENSGT00510000046843.b ENSGT00430000032851 ENSGT00430000033088 ENSGT00410000029301 ENSGT00950000182952.C.pc.b ENSGT00390000018086.o.b.b ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ##22 ENSGT00940000158686 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.b.a ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000153524.b.a.a.k.a ENSGT00940000158251 ENSGT00940000163898 Olive baboon MODERN SPECIES 19 UBE2N (ENSPANG00000036061) ENSPANG00000001006 ENSPANG00000048776 ENSPANG00000046377 EEA1 (ENSPANG00000012190) PLEKHG7 (ENSPANG00000010989) ENSPANG00000001912 BTG1 (ENSPANG00000047180) ENSPANG00000040226 ENSPANG00000043992 DCN (ENSPANG00000011237) LUM (ENSPANG00000016364) KERA (ENSPANG00000007908) EPYC (ENSPANG00000012063) CCER1 (ENSPANG00000050482) ENSPANG00000050618 ##22 ATP2B1 (ENSPANG00000012255) POC1B (ENSPANG00000015875) DUSP6 (ENSPANG00000044321) ENSPANG00000039666 KITLG (ENSPANG00000017126) TMTC3 (ENSPANG00000022133) CEP290 (ENSPANG00000004601) C12orf29 (ENSPANG00000020430) C12orf50 (ENSPANG00000008229) ENSPANG00000010563 ENSPANG00000047254 ENSPANG00000043296 MGAT4C (ENSPANG00000014454) NTS (ENSPANG00000020392) RASSF9 (ENSPANG00000023605) Cercopithecinae_d ANCESTRAL SPECIES 5 ENSGT00540000070023.c.a.a.n ENSGT00940000155210.a.b ENSGT00940000156910 ENSGT00950000183185.c.a.a.t ENSGT00510000046843.b ENSGT00430000032851 ENSGT00430000033088 ENSGT00410000029301 ENSGT00950000182952.C.pc.b ENSGT00390000018086.o.b.b ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ##22 ENSGT00940000158686 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00950000182767.b.b.d.hb.b.a.b.a.a.b.a Sooty mangabey MODERN SPECIES 250 KERA (ENSCATG00000041652) EPYC (ENSCATG00000042036) CCER1 (ENSCATG00000042384) ENSCATG00000042581 ENSCATG00000032380 ##22 ENSCATG00000035765 ATP2B1 (ENSCATG00000029397) POC1B (ENSCATG00000036201) DUSP6 (ENSCATG00000041410) KITLG (ENSCATG00000020524) TMTC3 (ENSCATG00000038880) CEP290 (ENSCATG00000043886) C12orf29 (ENSCATG00000015717) C12orf50 (ENSCATG00000023207) ENSCATG00000030267 Drill MODERN SPECIES 992 ENSMLEG00000043842 DCN (ENSMLEG00000039946) LUM (ENSMLEG00000028378) KERA (ENSMLEG00000042668) EPYC (ENSMLEG00000030276) CCER1 (ENSMLEG00000035109) ENSMLEG00000038911 ##22 ATP2B1 (ENSMLEG00000038606) POC1B (ENSMLEG00000031700) DUSP6 (ENSMLEG00000029741) KITLG (ENSMLEG00000027354) Rhinopithecus ANCESTRAL SPECIES 88 ENSGT00540000070023.c.b.b ENSGT00940000155210.a.b ENSGT00390000008196.g.b.b ENSGT00940000156910 ENSGT00950000183185.c.a.a.t ENSGT00510000046843.b ENSGT00430000032851 ENSGT00430000033088 ENSGT00410000029301 ENSGT00950000182952.C.qc ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ##22 ENSGT00940000158686 ENSGT00940000160413 ENSGT00940000158342.b Golden snub-nosed monkey MODERN SPECIES 1101 ENSRROG00000032483 ##22 ATP2B1 (ENSRROG00000026311) POC1B (ENSRROG00000044376) DUSP6 (ENSRROG00000039418) Black snub-nosed monkey MODERN SPECIES 247 ENSRBIG00000044361 ENSRBIG00000041083 ENSRBIG00000042548 EEA1 (ENSRBIG00000033284) PLEKHG7 (ENSRBIG00000042939) ENSRBIG00000025951 ENSRBIG00000044583 ENSRBIG00000041392 BTG1 (ENSRBIG00000031713) DCN (ENSRBIG00000019558) LUM (ENSRBIG00000021434) KERA (ENSRBIG00000029673) EPYC (ENSRBIG00000044397) CCER1 (ENSRBIG00000028059) ENSRBIG00000026791 ENSRBIG00000036719 ##22 ATP2B1 (ENSRBIG00000032700) CNTNAP5 (ENSRBIG00000043033) SLC9A3 (ENSRBIG00000034086) EXOC3 (ENSRBIG00000027923) AHRR (ENSRBIG00000034863) Catarrhini ANCESTRAL SPECIES 25 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00390000011549 ENSGT00950000182802.A.a.a.e.a.a.a ENSGT00950000183107.a.b.a.ub ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00910000147022 ENSGT00390000000582 ENSGT00390000011636 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00390000002960 ENSGT00910000147159 Hominoidea ANCESTRAL SPECIES 26 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00390000011549 ENSGT00950000182802.A.a.a.e.a.a.a ENSGT00950000183107.a.b.a.ub ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00910000147022 ENSGT00390000000582 ENSGT00390000011636 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b.f ENSGT00910000148153 ENSGT00950000183064.b.e ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 Hominidae ANCESTRAL SPECIES 25 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00950000183107.a.b.a.ub ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00910000147022 ENSGT00390000000582 ENSGT00390000011636 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b.f ENSGT00910000148153 ENSGT00950000183064.b.e ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 Homo/Pan/Gorilla group ANCESTRAL SPECIES 27 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00950000183107.a.b.a.ub ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00910000147022 ENSGT00390000000582 ENSGT00390000011636 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b.f ENSGT00910000148153 ENSGT00950000183064.b.e ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 Homo/Pan group ANCESTRAL SPECIES 26 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00950000183107.a.b.a.ub ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00910000147022 ENSGT00390000000582 ENSGT00390000011636 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b.f ENSGT00910000148153 ENSGT00950000183064.b.e ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 Human MODERN SPECIES 13 RIPK4 (ENSG00000183421) TMPRSS2 (ENSG00000184012) MX1 (ENSG00000157601) MX2 (ENSG00000183486) FAM3B (ENSG00000183844) BACE2 (ENSG00000182240) DSCAM (ENSG00000171587) PCP4 (ENSG00000183036) IGSF5 (ENSG00000183067) B3GALT5 (ENSG00000183778) SH3BGR (ENSG00000185437) LCA5L (ENSG00000157578) GET1-SH3BGR (ENSG00000285815) GET1 (ENSG00000182093) HMGN1 (ENSG00000205581) BRWD1 (ENSG00000185658) ##22 PSMG1 (ENSG00000183527) ETS2 (ENSG00000157557) ERG (ENSG00000157554) KCNJ15 (ENSG00000157551) KCNJ6 (ENSG00000157542) DYRK1A (ENSG00000157540) VPS26C (ENSG00000157538) TTC3 (ENSG00000182670) PIGP (ENSG00000185808) RIPPLY3 (ENSG00000183145) HLCS (ENSG00000159267) SIM2 (ENSG00000159263) CLDN14 (ENSG00000159261) CHAF1B (ENSG00000159259) MORC3 (ENSG00000159256) Pan ANCESTRAL SPECIES 27 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00950000183107.a.b.a.ub ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00910000147022 ENSGT00390000000582 ENSGT00390000011636 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b.f ENSGT00910000148153 ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00910000147159 Chimpanzee MODERN SPECIES 12 C2CD2 (ENSPTRG00000013932) PRDM15 (ENSPTRG00000013930) RIPK4 (ENSPTRG00000013929) TMPRSS2 (ENSPTRG00000013928) MX1 (ENSPTRG00000013927) FAM3B (ENSPTRG00000013925) BACE2 (ENSPTRG00000013924) DSCAM (ENSPTRG00000013922) PCP4 (ENSPTRG00000013921) IGSF5 (ENSPTRG00000013920) B3GALT5 (ENSPTRG00000052056) SH3BGR (ENSPTRG00000013917) LCA5L (ENSPTRG00000013916) GET1 (ENSPTRG00000013915) ENSPTRG00000031426 BRWD1 (ENSPTRG00000013912) ##22 PSMG1 (ENSPTRG00000013911) ETS2 (ENSPTRG00000013908) ERG (ENSPTRG00000013907) KCNJ15 (ENSPTRG00000043267) ENSPTRG00000052552 ENSPTRG00000013904 ENSPTRG00000013903 KCNJ6 (ENSPTRG00000004469) DYRK1A (ENSPTRG00000013901) VPS26C (ENSPTRG00000013900) ENSPTRG00000048727 TTC3 (ENSPTRG00000013898) PIGP (ENSPTRG00000013897) RIPPLY3 (ENSPTRG00000013896) HLCS (ENSPTRG00000013895) Bonobo MODERN SPECIES 12 ENSPPAG00000030922 RIPK4 (ENSPPAG00000027031) TMPRSS2 (ENSPPAG00000018889) ENSPPAG00000000669 MX1 (ENSPPAG00000034486) MX2 (ENSPPAG00000032451) FAM3B (ENSPPAG00000030408) BACE2 (ENSPPAG00000028296) DSCAM (ENSPPAG00000017108) PCP4 (ENSPPAG00000041210) B3GALT5 (ENSPPAG00000039797) ENSPPAG00000037065 LCA5L (ENSPPAG00000036290) GET1 (ENSPPAG00000034665) ENSPPAG00000032181 BRWD1 (ENSPPAG00000029543) ##22 PSMG1 (ENSPPAG00000028596) ETS2 (ENSPPAG00000027688) ERG (ENSPPAG00000030567) KCNJ15 (ENSPPAG00000032085) ENSPPAG00000033288 ENSPPAG00000037211 ENSPPAG00000036930 KCNJ6 (ENSPPAG00000032498) DYRK1A (ENSPPAG00000032422) ENSPPAG00000029622 ENSPPAG00000032499 TTC3 (ENSPPAG00000006846) PIGP (ENSPPAG00000034406) RIPPLY3 (ENSPPAG00000034300) ENSPPAG00000034271 Gorilla MODERN SPECIES 12 PRDM15 (ENSGGOG00000011345) RIPK4 (ENSGGOG00000015422) TMPRSS2 (ENSGGOG00000004836) MX1 (ENSGGOG00000001560) MX2 (ENSGGOG00000001554) FAM3B (ENSGGOG00000015137) BACE2 (ENSGGOG00000023241) DSCAM (ENSGGOG00000014691) PCP4 (ENSGGOG00000008772) IGSF5 (ENSGGOG00000000146) B3GALT5 (ENSGGOG00000004209) ENSGGOG00000005007 LCA5L (ENSGGOG00000013149) GET1 (ENSGGOG00000013144) ENSGGOG00000013672 BRWD1 (ENSGGOG00000002545) ##22 PSMG1 (ENSGGOG00000005681) ETS2 (ENSGGOG00000015464) ERG (ENSGGOG00000011391) KCNJ15 (ENSGGOG00000038780) ENSGGOG00000036523 ENSGGOG00000024462 ENSGGOG00000023530 KCNJ6 (ENSGGOG00000003812) ENSGGOG00000011897 ENSGGOG00000001581 TTC3 (ENSGGOG00000011116) PIGP (ENSGGOG00000010275) RIPPLY3 (ENSGGOG00000038116) HLCS (ENSGGOG00000011135) SIM2 (ENSGGOG00000014943) Orangutan MODERN SPECIES 12 C2CD2 (ENSPPYG00000011442) PRDM15 (ENSPPYG00000011441) RIPK4 (ENSPPYG00000011440) TMPRSS2 (ENSPPYG00000011438) MX1 (ENSPPYG00000011437) MX2 (ENSPPYG00000011436) FAM3B (ENSPPYG00000011435) BACE2 (ENSPPYG00000011433) DSCAM (ENSPPYG00000011432) IGSF5 (ENSPPYG00000011430) B3GALT5 (ENSPPYG00000011429) ENSPPYG00000011428 LCA5L (ENSPPYG00000032149) GET1 (ENSPPYG00000011427) ENSPPYG00000011426 BRWD1 (ENSPPYG00000011424) ##22 PSMG1 (ENSPPYG00000011423) ETS2 (ENSPPYG00000011421) ERG (ENSPPYG00000011419) KCNJ15 (ENSPPYG00000031631) ENSPPYG00000011415 KCNJ6 (ENSPPYG00000011556) DYRK1A (ENSPPYG00000011412) VPS26C (ENSPPYG00000040834) TTC3 (ENSPPYG00000011410) PIGP (ENSPPYG00000011409) RIPPLY3 (ENSPPYG00000040629) HLCS (ENSPPYG00000011406) SIM2 (ENSPPYG00000011405) CLDN14 (ENSPPYG00000011404) CHAF1B (ENSPPYG00000011403) Gibbon MODERN SPECIES 17 RIPK4 (ENSNLEG00000008693) TMPRSS2 (ENSNLEG00000008677) MX1 (ENSNLEG00000008634) MX2 (ENSNLEG00000008625) FAM3B (ENSNLEG00000008601) ENSNLEG00000008585 DSCAM (ENSNLEG00000028860) ENSNLEG00000032106 PCP4 (ENSNLEG00000013201) IGSF5 (ENSNLEG00000013181) B3GALT5 (ENSNLEG00000013171) ENSNLEG00000013169 LCA5L (ENSNLEG00000013153) GET1 (ENSNLEG00000033928) ENSNLEG00000028365 BRWD1 (ENSNLEG00000013134) ##22 PSMG1 (ENSNLEG00000028150) ETS2 (ENSNLEG00000004804) ERG (ENSNLEG00000004758) KCNJ15 (ENSNLEG00000033586) ENSNLEG00000031686 ENSNLEG00000030342 KCNJ6 (ENSNLEG00000004741) DYRK1A (ENSNLEG00000004733) ENSNLEG00000004717 ENSNLEG00000032242 TTC3 (ENSNLEG00000004545) PIGP (ENSNLEG00000004523) ENSNLEG00000004521 ENSNLEG00000031839 HLCS (ENSNLEG00000004489) Cercopithecidae ANCESTRAL SPECIES 28 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00950000183107.a.b.a.ub ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00910000147022 ENSGT00390000000582 ENSGT00390000011636 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00390000002960 ENSGT00910000147159 Cercopithecinae ANCESTRAL SPECIES 23 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00950000183107.a.b.a.ub ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00910000147022 ENSGT00390000000582 ENSGT00390000011636 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00390000002960 ENSGT00910000147159 Cercopithecinae_a ANCESTRAL SPECIES 22 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00950000183107.a.b.a.ub ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00910000147022 ENSGT00390000000582 ENSGT00390000011636 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00910000147749 ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00390000002960 Cercopithecinae_b ANCESTRAL SPECIES 29 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00950000183107.a.b.a.ub ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00910000147022 ENSGT00390000000582 ENSGT00390000011636 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00910000147749 ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00910000147159 Olive baboon MODERN SPECIES 14 PRDM15 (ENSPANG00000006262) RIPK4 (ENSPANG00000022205) TMPRSS2 (ENSPANG00000015992) MX1 (ENSPANG00000023901) MX2 (ENSPANG00000022204) BACE2 (ENSPANG00000007705) DSCAM (ENSPANG00000006261) PCP4 (ENSPANG00000044834) IGSF5 (ENSPANG00000033531) B3GALT5 (ENSPANG00000000557) ENSPANG00000035786 LCA5L (ENSPANG00000019228) GET1 (ENSPANG00000017092) HMGN1 (ENSPANG00000030801) ENSPANG00000041932 BRWD1 (ENSPANG00000015950) ##22 PSMG1 (ENSPANG00000021503) BB_R133_JSM474C8F (ENSPANG00000044329) ETS2 (ENSPANG00000024567) ENSPANG00000044873 ERG (ENSPANG00000019227) KCNJ15 (ENSPANG00000021162) ENSPANG00000034777 KCNJ6 (ENSPANG00000009021) DYRK1A (ENSPANG00000009693) VPS26C (ENSPANG00000005248) TTC3 (ENSPANG00000024566) PIGP (ENSPANG00000019363) RIPPLY3 (ENSPANG00000033880) ENSPANG00000044488 ENSPANG00000038151 Cercopithecinae_d ANCESTRAL SPECIES 36 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00950000183107.a.b.a.ub ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00910000147022 ENSGT00390000000582 ENSGT00390000011636 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00910000147749 ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00390000015823 Drill MODERN SPECIES 887 TMPRSS2 (ENSMLEG00000029709) MX1 (ENSMLEG00000032199) MX2 (ENSMLEG00000037071) FAM3B (ENSMLEG00000033110) BACE2 (ENSMLEG00000044038) DSCAM (ENSMLEG00000028425) PCP4 (ENSMLEG00000031531) IGSF5 (ENSMLEG00000006808) B3GALT5 (ENSMLEG00000030055) SH3BGR (ENSMLEG00000031375) LCA5L (ENSMLEG00000020734) GET1 (ENSMLEG00000038301) ENSMLEG00000031999 BRWD1 (ENSMLEG00000043257) ##22 PSMG1 (ENSMLEG00000043473) ETS2 (ENSMLEG00000024380) ERG (ENSMLEG00000033749) KCNJ15 (ENSMLEG00000027520) ENSMLEG00000020165 ENSMLEG00000011472 ENSMLEG00000041245 KCNJ6 (ENSMLEG00000005853) Sooty mangabey MODERN SPECIES 465 RIPK4 (ENSCATG00000044519) TMPRSS2 (ENSCATG00000035193) MX1 (ENSCATG00000036673) MX2 (ENSCATG00000035920) FAM3B (ENSCATG00000039352) ENSCATG00000032305 BACE2 (ENSCATG00000042433) DSCAM (ENSCATG00000016259) PCP4 (ENSCATG00000043532) IGSF5 (ENSCATG00000041067) B3GALT5 (ENSCATG00000039495) SH3BGR (ENSCATG00000040538) LCA5L (ENSCATG00000012924) GET1 (ENSCATG00000041953) ENSCATG00000043642 BRWD1 (ENSCATG00000007352) ##22 PSMG1 (ENSCATG00000042084) ETS2 (ENSCATG00000032809) ERG (ENSCATG00000045169) KCNJ15 (ENSCATG00000021817) ENSCATG00000019078 ENSCATG00000044826 ENSCATG00000044805 KCNJ6 (ENSCATG00000037213) DYRK1A (ENSCATG00000044358) VPS26C (ENSCATG00000019393) TTC3 (ENSCATG00000041926) PIGP (ENSCATG00000038403) RIPPLY3 (ENSCATG00000045245) ENSCATG00000040437 ENSCATG00000034753 Macaca ANCESTRAL SPECIES 3 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00950000183107.a.b.a.ub ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00910000147022 ENSGT00390000000582 ENSGT00390000011636 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00910000147749 ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00730000111429 ENSGT00390000002960 Macaca_a ANCESTRAL SPECIES 22 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00560000077266.b ENSGT00940000159847 ENSGT00390000011549 ENSGT00950000182802.A.a.a.e.a.a.a ENSGT00950000182802.A.a.b ENSGT00950000183107.a.b.a.ub ##22 ENSGT00500000044950 ENSGT00940000163505.a.a.b.b.b.a.b.b.c ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C.o ENSGT00390000013771.u ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.b.a.a.a.a.c.a.a ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 Rhesus MODERN SPECIES 13 C2CD2 (ENSMMUG00000007030) PRDM15 (ENSMMUG00000018046) RIPK4 (ENSMMUG00000018043) TMPRSS2 (ENSMMUG00000015332) MX1 (ENSMMUG00000015329) MX2 (ENSMMUG00000044257) BACE2 (ENSMMUG00000004257) DSCAM (ENSMMUG00000005174) PCP4 (ENSMMUG00000041181) IGSF5 (ENSMMUG00000003427) B3GALT5 (ENSMMUG00000003428) GET1 (ENSMMUG00000020654) LCA5L (ENSMMUG00000010407) ENSMMUG00000052792 ENSMMUG00000006075 BRWD1 (ENSMMUG00000008504) ##22 PSMG1 (ENSMMUG00000008498) ENSMMUG00000063670 ETS2 (ENSMMUG00000009063) ERG (ENSMMUG00000010296) KCNJ15 (ENSMMUG00000056855) KCNJ6 (ENSMMUG00000018136) DYRK1A (ENSMMUG00000018131) VPS26C (ENSMMUG00000006962) TTC3 (ENSMMUG00000017505) PIGP (ENSMMUG00000016211) ENSMMUG00000058732 RIPPLY3 (ENSMMUG00000043090) HLCS (ENSMMUG00000015566) SIM2 (ENSMMUG00000058333) CLDN14 (ENSMMUG00000000488) Crab-eating macaque MODERN SPECIES 13 MX1 (ENSMFAG00000044214) TMPRSS2 (ENSMFAG00000044952) MX2 (ENSMFAG00000046255) FAM3B (ENSMFAG00000033710) BACE2 (ENSMFAG00000032329) DSCAM (ENSMFAG00000033365) ENSMFAG00000060227 PCP4 (ENSMFAG00000002748) ENSMFAG00000052126 IGSF5 (ENSMFAG00000033889) B3GALT5 (ENSMFAG00000000800) ENSMFAG00000031582 LCA5L (ENSMFAG00000008201) ENSMFAG00000002474 ENSMFAG00000056788 BRWD1 (ENSMFAG00000039942) ##22 ENSMFAG00000055049 ETS2 (ENSMFAG00000055774) ERG (ENSMFAG00000031991) KCNJ15 (ENSMFAG00000018546) ENSMFAG00000061529 ENSMFAG00000060619 KCNJ6 (ENSMFAG00000040836) DYRK1A (ENSMFAG00000035589) VPS26C (ENSMFAG00000041827) TTC3 (ENSMFAG00000045889) ENSMFAG00000040294 ENSMFAG00000053400 HLCS (ENSMFAG00000031411) SIM2 (ENSMFAG00000002855) CLDN14 (ENSMFAG00000029830) Pig-tailed macaque MODERN SPECIES 503 PRDM15 (ENSMNEG00000041997) RIPK4 (ENSMNEG00000024370) TMPRSS2 (ENSMNEG00000029183) MX1 (ENSMNEG00000032698) MX2 (ENSMNEG00000038461) FAM3B (ENSMNEG00000036712) BACE2 (ENSMNEG00000039867) DSCAM (ENSMNEG00000045567) PCP4 (ENSMNEG00000043382) IGSF5 (ENSMNEG00000036150) B3GALT5 (ENSMNEG00000028563) SH3BGR (ENSMNEG00000044767) LCA5L (ENSMNEG00000034779) GET1 (ENSMNEG00000036276) ENSMNEG00000043143 BRWD1 (ENSMNEG00000037268) ##22 PSMG1 (ENSMNEG00000028968) ETS2 (ENSMNEG00000029078) ERG (ENSMNEG00000028447) KCNJ15 (ENSMNEG00000012650) ENSMNEG00000043068 ENSMNEG00000033234 ENSMNEG00000010394 KCNJ6 (ENSMNEG00000036804) DYRK1A (ENSMNEG00000027229) VPS26C (ENSMNEG00000019931) ENSMNEG00000028032 TTC3 (ENSMNEG00000017406) PIGP (ENSMNEG00000029111) RIPPLY3 (ENSMNEG00000039675) ENSMNEG00000000027 Vervet Monkey MODERN SPECIES 11 TMPRSS2 (ENSCSAG00000008229) MX1 (ENSCSAG00000008237) MX2 (ENSCSAG00000008253) FAM3B (ENSCSAG00000008260) BACE2 (ENSCSAG00000008267) ENSCSAG00000000280 ENSCSAG00000008272 DSCAM (ENSCSAG00000008297) PCP4 (ENSCSAG00000008304) IGSF5 (ENSCSAG00000008315) B3GALT5 (ENSCSAG00000018714) SH3BGR (ENSCSAG00000008320) LCA5L (ENSCSAG00000008329) GET1 (ENSCSAG00000008355) HMGN1 (ENSCSAG00000008397) BRWD1 (ENSCSAG00000008437) ##22 PSMG1 (ENSCSAG00000008450) ETS2 (ENSCSAG00000008454) ERG (ENSCSAG00000008463) KCNJ15 (ENSCSAG00000018713) KCNJ6 (ENSCSAG00000008472) ENSCSAG00000018712 DYRK1A (ENSCSAG00000008483) VPS26C (ENSCSAG00000008515) ENSCSAG00000008520 PIGP (ENSCSAG00000008532) HLCS (ENSCSAG00000008541) SIM2 (ENSCSAG00000008567) CLDN14 (ENSCSAG00000018711) CHAF1B (ENSCSAG00000008631) MORC3 (ENSCSAG00000008649) Rhinopithecus ANCESTRAL SPECIES 353 ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00950000183107.a.b.a.ub ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00910000147022 ENSGT00390000000582 ENSGT00390000011636 Golden snub-nosed monkey MODERN SPECIES 1413 PCP4 (ENSRROG00000041931) IGSF5 (ENSRROG00000044392) B3GALT5 (ENSRROG00000029179) SH3BGR (ENSRROG00000037605) LCA5L (ENSRROG00000043686) GET1 (ENSRROG00000038743) ENSRROG00000030755 BRWD1 (ENSRROG00000030474) ##22 PSMG1 (ENSRROG00000037672) ETS2 (ENSRROG00000039824) ERG (ENSRROG00000036615) KCNJ15 (ENSRROG00000005056) ENSRROG00000041277 ENSRROG00000031314 ENSRROG00000027534 Black snub-nosed monkey MODERN SPECIES 658 PCP4 (ENSRBIG00000027088) IGSF5 (ENSRBIG00000036727) B3GALT5 (ENSRBIG00000017353) SH3BGR (ENSRBIG00000035022) LCA5L (ENSRBIG00000036213) GET1 (ENSRBIG00000030445) ENSRBIG00000031903 BRWD1 (ENSRBIG00000028196) ##22 PSMG1 (ENSRBIG00000038977) ETS2 (ENSRBIG00000033816) ERG (ENSRBIG00000042898) KCNJ15 (ENSRBIG00000024702) ENSRBIG00000033348 ENSRBIG00000040958 ENSRBIG00000042276 DYNLRB2 (ENSRBIG00000028645) Platyrrhini ANCESTRAL SPECIES 31 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00940000169148 ENSGT00390000011636 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b.g.a ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00910000147159 ENSGT00940000159985 Mas night monkey MODERN SPECIES 1376 PRDM15 (ENSANAG00000023230) RIPK4 (ENSANAG00000030821) TMPRSS2 (ENSANAG00000031604) MX1 (ENSANAG00000032841) MX2 (ENSANAG00000030389) FAM3B (ENSANAG00000019755) BACE2 (ENSANAG00000020891) ENSANAG00000034923 DSCAM (ENSANAG00000029585) PCP4 (ENSANAG00000022174) IGSF5 (ENSANAG00000023294) SH3BGR (ENSANAG00000033495) LCA5L (ENSANAG00000036638) GET1 (ENSANAG00000014374) ENSANAG00000037575 BRWD1 (ENSANAG00000027426) ##22 PSMG1 (ENSANAG00000029982) ETS2 (ENSANAG00000035263) ENSANAG00000019801 ERG (ENSANAG00000027714) KCNJ15 (ENSANAG00000019657) ENSANAG00000016826 KCNJ6 (ENSANAG00000037322) DYRK1A (ENSANAG00000025205) ENSANAG00000022579 VPS26C (ENSANAG00000033846) ENSANAG00000021305 ENSANAG00000024896 ENSANAG00000033496 PIGP (ENSANAG00000034997) RIPPLY3 (ENSANAG00000029570) Cebidae ANCESTRAL SPECIES 32 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00940000169148 ENSGT00390000011636 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b.g.a ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 Cebidae_a ANCESTRAL SPECIES 29 ENSGT00530000063764.a.h ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT00940000169148 ENSGT00390000011636 ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b.g.a ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 Capuchin MODERN SPECIES 41 PCP4 (ENSCCAG00000031003) IGSF5 (ENSCCAG00000034768) SH3BGR (ENSCCAG00000036879) LCA5L (ENSCCAG00000021449) GET1 (ENSCCAG00000026562) ENSCCAG00000032877 BRWD1 (ENSCCAG00000032750) ##22 PSMG1 (ENSCCAG00000036563) ETS2 (ENSCCAG00000032051) ERG (ENSCCAG00000028041) KCNJ15 (ENSCCAG00000004572) ENSCCAG00000030555 KCNJ6 (ENSCCAG00000023161) DYRK1A (ENSCCAG00000024141) ENSCCAG00000014797 ENSCCAG00000034512 ENSCCAG00000030643 ENSCCAG00000033805 ENSCCAG00000038088 PIGP (ENSCCAG00000036761) RIPPLY3 (ENSCCAG00000034670) HLCS (ENSCCAG00000036991) Bolivian squirrel monkey MODERN SPECIES 66 UMODL1 (ENSSBOG00000035786) C2CD2 (ENSSBOG00000031814) PRDM15 (ENSSBOG00000013278) RIPK4 (ENSSBOG00000029180) TMPRSS2 (ENSSBOG00000020098) MX2 (ENSSBOG00000029626) FAM3B (ENSSBOG00000035878) BACE2 (ENSSBOG00000025958) DSCAM (ENSSBOG00000032237) ENSSBOG00000016785 IGSF5 (ENSSBOG00000021300) SH3BGR (ENSSBOG00000035842) LCA5L (ENSSBOG00000028818) GET1 (ENSSBOG00000020756) ENSSBOG00000032422 BRWD1 (ENSSBOG00000030561) ##22 ENSSBOG00000019150 PSMG1 (ENSSBOG00000027602) ETS2 (ENSSBOG00000033069) ERG (ENSSBOG00000026628) KCNJ15 (ENSSBOG00000016506) ENSSBOG00000019633 ENSSBOG00000019510 KCNJ6 (ENSSBOG00000027870) DYRK1A (ENSSBOG00000031681) ENSSBOG00000004124 TTC3 (ENSSBOG00000023926) PIGP (ENSSBOG00000029088) HLCS (ENSSBOG00000030015) SIM2 (ENSSBOG00000034637) CLDN14 (ENSSBOG00000018972) Marmoset DUPLICATION Marmoset MODERN SPECIES 13 FAM3B (ENSCJAG00000011329) BACE2 (ENSCJAG00000011344) ENSCJAG00000083619 ENSCJAG00000084691 ENSCJAG00000083017 DSCAM (ENSCJAG00000005540) PCP4 (ENSCJAG00000086635) ENSCJAG00000083298 B3GALT5 (ENSCJAG00000005667) ENSCJAG00000070994 ENSCJAG00000085074 ENSCJAG00000005687 LCA5L (ENSCJAG00000005693) ENSCJAG00000038251 ENSCJAG00000045192 BRWD1 (ENSCJAG00000015042) ##22 PSMG1 (ENSCJAG00000015016) ETS2 (ENSCJAG00000008102) ERG (ENSCJAG00000008119) KCNJ15 (ENSCJAG00000039990) KCNJ6 (ENSCJAG00000002599) DYRK1A (ENSCJAG00000002609) VPS26C (ENSCJAG00000002626) TTC3 (ENSCJAG00000002640) PIGP (ENSCJAG00000002683) HLCS (ENSCJAG00000002697) SIM2 (ENSCJAG00000002704) CLDN14 (ENSCJAG00000002769) CHAF1B (ENSCJAG00000002772) MORC3 (ENSCJAG00000002781) DOP1B (ENSCJAG00000002725) Marmoset MODERN SPECIES 8 COPB2 (ENSCJAG00000002200) MRPS22 (ENSCJAG00000002236) ENSCJAG00000046249 ENSCJAG00000002248 FOXL2NB (ENSCJAG00000002249) FOXL2 (ENSCJAG00000041357) PIK3CB (ENSCJAG00000002252) ENSCJAG00000076544 FAIM (ENSCJAG00000002299) CEP70 (ENSCJAG00000002315) ESYT3 (ENSCJAG00000002351) MRAS (ENSCJAG00000052904) ENSCJAG00000070308 NME9 (ENSCJAG00000002391) ARMC8 (ENSCJAG00000002405) ENSCJAG00000023360 ##22 DBR1 (ENSCJAG00000002433) A4GNT (ENSCJAG00000002444) DZIP1L (ENSCJAG00000002446) CLDN18 (ENSCJAG00000002453) SOX14 (ENSCJAG00000080134) ENSCJAG00000082796 ENSCJAG00000076057 IL20RB (ENSCJAG00000002455) NCK1 (ENSCJAG00000002476) SLC35G2 (ENSCJAG00000002492) STAG1 (ENSCJAG00000002501) PCCB (ENSCJAG00000002613) ENSCJAG00000087205 MSL2 (ENSCJAG00000040702) PPP2R3A (ENSCJAG00000002646) Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.a ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Bushbaby MODERN SPECIES 295 ENSOGAG00000008386 B3GALT5 (ENSOGAG00000008383) SH3BGR (ENSOGAG00000001720) ENSOGAG00000024805 ENSOGAG00000031213 LCA5L (ENSOGAG00000001718) ENSOGAG00000030055 GET1 (ENSOGAG00000026761) ENSOGAG00000010329 BRWD1 (ENSOGAG00000009562) ##22 PSMG1 (ENSOGAG00000032487) ETS2 (ENSOGAG00000006580) ERG (ENSOGAG00000000044) KCNJ15 (ENSOGAG00000007599) KCNJ6 (ENSOGAG00000015429) DYRK1A (ENSOGAG00000011236) VPS26C (ENSOGAG00000005526) TTC3 (ENSOGAG00000005512) PIGP (ENSOGAG00000011097) RIPPLY3 (ENSOGAG00000006538) HLCS (ENSOGAG00000002192) SIM2 (ENSOGAG00000028990) CLDN14 (ENSOGAG00000026091) CHAF1B (ENSOGAG00000034514) MORC3 (ENSOGAG00000011451) Lemuriformes ANCESTRAL SPECIES 9 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.a.a ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Mouse lemur MODERN SPECIES 24 ABCG1 (ENSMICG00000015133) UMODL1 (ENSMICG00000016376) ZBTB21 (ENSMICG00000042192) C2CD2 (ENSMICG00000013844) PRDM15 (ENSMICG00000013783) RIPK4 (ENSMICG00000038490) DSCAM (ENSMICG00000042048) PCP4 (ENSMICG00000015516) ENSMICG00000028713 B3GALT5 (ENSMICG00000045304) SH3BGR (ENSMICG00000007755) ENSMICG00000015813 ENSMICG00000046495 GET1 (ENSMICG00000015808) ENSMICG00000038583 BRWD1 (ENSMICG00000013213) ##22 PSMG1 (ENSMICG00000000385) ENSMICG00000027563 ETS2 (ENSMICG00000026895) ERG (ENSMICG00000003196) KCNJ15 (ENSMICG00000045136) KCNJ6 (ENSMICG00000010904) DYRK1A (ENSMICG00000010871) ENSMICG00000038207 VPS26C (ENSMICG00000006453) TTC3 (ENSMICG00000006423) ENSMICG00000027574 RIPPLY3 (ENSMICG00000031167) HLCS (ENSMICG00000013188) SIM2 (ENSMICG00000013168) CHAF1B (ENSMICG00000013158) Lemuriformes_a ANCESTRAL SPECIES 60 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686 ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.A.a.a.a.b.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 186 TMPRSS2 (ENSPCOG00000020814) MX1 (ENSPCOG00000027202) MX2 (ENSPCOG00000025353) FAM3B (ENSPCOG00000022148) BACE2 (ENSPCOG00000022910) ENSPCOG00000023190 DSCAM (ENSPCOG00000017132) PCP4 (ENSPCOG00000022744) ENSPCOG00000013389 B3GALT5 (ENSPCOG00000017471) SH3BGR (ENSPCOG00000018334) ENSPCOG00000026254 GET1 (ENSPCOG00000014862) ENSPCOG00000017286 ENSPCOG00000018754 ##22 ENSPCOG00000009124 ##22 PSMG1 (ENSPCOG00000015910) ETS2 (ENSPCOG00000003472) ERG (ENSPCOG00000018128) KCNJ15 (ENSPCOG00000026074) KCNJ6 (ENSPCOG00000025899) DYRK1A (ENSPCOG00000019153) VPS26C (ENSPCOG00000027513) ENSPCOG00000026647 TTC3 (ENSPCOG00000006603) ENSPCOG00000015022 RIPPLY3 (ENSPCOG00000018211) ENSPCOG00000023020 HLCS (ENSPCOG00000017343) SIM2 (ENSPCOG00000019862) CHAF1B (ENSPCOG00000013033) Coquerels sifaka MODERN SPECIES 186 RIPK4 (ENSPCOG00000001750) TMPRSS2 (ENSPCOG00000020814) MX1 (ENSPCOG00000027202) MX2 (ENSPCOG00000025353) FAM3B (ENSPCOG00000022148) BACE2 (ENSPCOG00000022910) ENSPCOG00000023190 DSCAM (ENSPCOG00000017132) PCP4 (ENSPCOG00000022744) ENSPCOG00000013389 B3GALT5 (ENSPCOG00000017471) SH3BGR (ENSPCOG00000018334) ENSPCOG00000026254 GET1 (ENSPCOG00000014862) ENSPCOG00000017286 ENSPCOG00000018754 ##22 ENSPCOG00000009124 ##22 PSMG1 (ENSPCOG00000015910) ETS2 (ENSPCOG00000003472) ERG (ENSPCOG00000018128) KCNJ15 (ENSPCOG00000026074) KCNJ6 (ENSPCOG00000025899) DYRK1A (ENSPCOG00000019153) VPS26C (ENSPCOG00000027513) ENSPCOG00000026647 TTC3 (ENSPCOG00000006603) ENSPCOG00000015022 RIPPLY3 (ENSPCOG00000018211) ENSPCOG00000023020 HLCS (ENSPCOG00000017343) SIM2 (ENSPCOG00000019862) Greater bamboo lemur MODERN SPECIES 664 TMPRSS2 (ENSPSMG00000023280) MX1 (ENSPSMG00000023244) MX2 (ENSPSMG00000023200) FAM3B (ENSPSMG00000023193) BACE2 (ENSPSMG00000023186) DSCAM (ENSPSMG00000023178) PCP4 (ENSPSMG00000023144) ENSPSMG00000023138 B3GALT5 (ENSPSMG00000023128) ENSPSMG00000023127 SH3BGR (ENSPSMG00000023123) ENSPSMG00000023105 ENSPSMG00000023100 GET1 (ENSPSMG00000023096) ENSPSMG00000023069 BRWD1 (ENSPSMG00000023022) ##22 PSMG1 (ENSPSMG00000022930) ENSPSMG00000022915 ETS2 (ENSPSMG00000022910) Atlantogenata ANCESTRAL SPECIES 110 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Afrotheria ANCESTRAL SPECIES 144 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Afrotheria_a ANCESTRAL SPECIES 147 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a Elephant MODERN SPECIES 513 RIPK4 (ENSLAFG00000008863) TMPRSS2 (ENSLAFG00000027954) MX2 (ENSLAFG00000009018) ENSLAFG00000029694 ENSLAFG00000016541 FAM3B (ENSLAFG00000005755) BACE2 (ENSLAFG00000027997) DSCAM (ENSLAFG00000005372) PCP4 (ENSLAFG00000017850) ENSLAFG00000005039 ENSLAFG00000026827 ENSLAFG00000005853 ENSLAFG00000027123 LCA5L (ENSLAFG00000012558) GET1 (ENSLAFG00000008072) BRWD1 (ENSLAFG00000015097) ##22 PSMG1 (ENSLAFG00000015096) ETS2 (ENSLAFG00000004469) ERG (ENSLAFG00000005455) KCNJ15 (ENSLAFG00000013702) KCNJ6 (ENSLAFG00000007238) DYRK1A (ENSLAFG00000000815) VPS26C (ENSLAFG00000000818) ENSLAFG00000004146 PIGP (ENSLAFG00000004145) HLCS (ENSLAFG00000000126) SIM2 (ENSLAFG00000000122) CLDN14 (ENSLAFG00000000859) CHAF1B (ENSLAFG00000000692) MORC3 (ENSLAFG00000000689) DOP1B (ENSLAFG00000017256) Hyrax MODERN SPECIES 6230 BRWD1 (ENSPCAG00000005846) ##22 PSMG1 (ENSPCAG00000005785) Tenrec MODERN SPECIES 7407 BRWD1 (ENSETEG00000011665) ##22 PSMG1 (ENSETEG00000011663) Xenarthra ANCESTRAL SPECIES 513 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 Armadillo MODERN SPECIES 289 DSCAM (ENSDNOG00000002369) PCP4 (ENSDNOG00000036624) ENSDNOG00000004197 B3GALT5 (ENSDNOG00000033456) ENSDNOG00000035961 ENSDNOG00000031964 ENSDNOG00000045009 SH3BGR (ENSDNOG00000046236) ENSDNOG00000049110 GET1 (ENSDNOG00000039289) BRWD1 (ENSDNOG00000014021) ##22 PSMG1 (ENSDNOG00000014014) Sloth MODERN SPECIES 6650 BRWD1 (ENSCHOG00000002594) ##22 PSMG1 (ENSCHOG00000002587) Sauria ANCESTRAL SPECIES 2 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00940000164201 ENSGT00940000155686.c ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Lepidosauria ANCESTRAL SPECIES 4 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00940000164201 ENSGT00940000155686.c ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 tuatara DUPLICATION tuatara DUPLICATION tuatara DUPLICATION tuatara DUPLICATION tuatara DUPLICATION tuatara MODERN SPECIES 736 DSCAM (ENSSPUG00000011507) PCP4 (ENSSPUG00000011551) SH3BGR (ENSSPUG00000011594) GET1 (ENSSPUG00000011614) ENSSPUG00000011624 ENSSPUG00000011632 ##22 ENSSPUG00000011645 ##22 ENSSPUG00000011647 ##22 ENSSPUG00000011656 ##22 ENSSPUG00000011670 ##22 ENSSPUG00000011681 ##22 ENSSPUG00000011694 PSMG1 (ENSSPUG00000011702) tuatara MODERN SPECIES 736 DSCAM (ENSSPUG00000011507) PCP4 (ENSSPUG00000011551) SH3BGR (ENSSPUG00000011594) GET1 (ENSSPUG00000011614) ENSSPUG00000011624 ENSSPUG00000011632 ##22 ENSSPUG00000011645 ##22 ENSSPUG00000011647 ##22 ENSSPUG00000011656 ##22 ENSSPUG00000011670 ##22 ENSSPUG00000011681 ##22 ENSSPUG00000011694 PSMG1 (ENSSPUG00000011702) tuatara MODERN SPECIES 736 DSCAM (ENSSPUG00000011507) PCP4 (ENSSPUG00000011551) SH3BGR (ENSSPUG00000011594) GET1 (ENSSPUG00000011614) ENSSPUG00000011624 ENSSPUG00000011632 ##22 ENSSPUG00000011645 ##22 ENSSPUG00000011647 ##22 ENSSPUG00000011656 ##22 ENSSPUG00000011670 ##22 ENSSPUG00000011681 ##22 ENSSPUG00000011694 PSMG1 (ENSSPUG00000011702) tuatara MODERN SPECIES 736 DSCAM (ENSSPUG00000011507) PCP4 (ENSSPUG00000011551) SH3BGR (ENSSPUG00000011594) GET1 (ENSSPUG00000011614) ENSSPUG00000011624 ENSSPUG00000011632 ##22 ENSSPUG00000011645 ##22 ENSSPUG00000011647 ##22 ENSSPUG00000011656 ##22 ENSSPUG00000011670 ##22 ENSSPUG00000011681 ##22 ENSSPUG00000011694 PSMG1 (ENSSPUG00000011702) tuatara MODERN SPECIES 736 DSCAM (ENSSPUG00000011507) PCP4 (ENSSPUG00000011551) SH3BGR (ENSSPUG00000011594) GET1 (ENSSPUG00000011614) ENSSPUG00000011624 ENSSPUG00000011632 ##22 ENSSPUG00000011645 ##22 ENSSPUG00000011647 ##22 ENSSPUG00000011656 ##22 ENSSPUG00000011670 ##22 ENSSPUG00000011681 ##22 ENSSPUG00000011694 PSMG1 (ENSSPUG00000011702) tuatara MODERN SPECIES 736 DSCAM (ENSSPUG00000011507) PCP4 (ENSSPUG00000011551) SH3BGR (ENSSPUG00000011594) GET1 (ENSSPUG00000011614) ENSSPUG00000011624 ENSSPUG00000011632 ##22 ENSSPUG00000011645 ##22 ENSSPUG00000011647 ##22 ENSSPUG00000011656 ##22 ENSSPUG00000011670 ##22 ENSSPUG00000011681 ##22 ENSSPUG00000011694 PSMG1 (ENSSPUG00000011702) Episquamata ANCESTRAL SPECIES 2 ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00940000164201 ENSGT00940000155686.c ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964.c ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499 Laterata ANCESTRAL SPECIES ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00940000155686.c ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163238 ENSGT00940000163947 ENSGT00940000160964.c ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a ENSGT00510000046499.hb Common wall lizard MODERN SPECIES 12 PRDM15 (ENSPMRG00000021892) ENSPMRG00000021882 ENSPMRG00000021866 TMPRSS2 (ENSPMRG00000021850) MX1 (ENSPMRG00000021831) FAM3B (ENSPMRG00000021816) BACE2 (ENSPMRG00000021807) DSCAM (ENSPMRG00000021325) PCP4 (ENSPMRG00000021191) ENSPMRG00000021180 ENSPMRG00000021172 B3GALT5 (ENSPMRG00000021171) SH3BGR (ENSPMRG00000021165) LCA5L (ENSPMRG00000021152) GET1 (ENSPMRG00000021140) BRWD1 (ENSPMRG00000021108) ##22 ETS2 (ENSPMRG00000021097) ERG (ENSPMRG00000021074) KCNJ15 (ENSPMRG00000021059) KCNJ6 (ENSPMRG00000021055) DYRK1A (ENSPMRG00000021041) ENSPMRG00000021032 VPS26C (ENSPMRG00000021026) ENSPMRG00000021012 PIGP (ENSPMRG00000020985) ENSPMRG00000020980 HLCS (ENSPMRG00000020975) SIM2 (ENSPMRG00000020967) CLDN14 (ENSPMRG00000020960) CHAF1B (ENSPMRG00000020932) MORC3 (ENSPMRG00000020919) Argentine black and white tegu MODERN SPECIES ENSSMRG00000022935 TMPRSS2 (ENSSMRG00000022936) ENSSMRG00000022937 ENSSMRG00000022938 FAM3B (ENSSMRG00000022939) BACE2 (ENSSMRG00000022940) DSCAM (ENSSMRG00000022942) PCP4 (ENSSMRG00000022976) ENSSMRG00000022977 B3GALT5 (ENSSMRG00000022978) ENSSMRG00000022979 SH3BGR (ENSSMRG00000022980) LCA5L (ENSSMRG00000022981) ENSSMRG00000022982 ENSSMRG00000022983 BRWD1 (ENSSMRG00000022992) ##22 ETS2 (ENSSMRG00000022993) ERG (ENSSMRG00000022995) KCNJ15 (ENSSMRG00000022997) ENSSMRG00000022998 KCNJ6 (ENSSMRG00000022999) DYRK1A (ENSSMRG00000023000) VPS26C (ENSSMRG00000023001) TTC3 (ENSSMRG00000023002) PIGP (ENSSMRG00000023003) HLCS (ENSSMRG00000023004) SIM2 (ENSSMRG00000023005) CLDN14 (ENSSMRG00000023006) CHAF1B (ENSSMRG00000023007) MORC3 (ENSSMRG00000023008) SETD4 (ENSSMRG00000023009) Toxicofera ANCESTRAL SPECIES 9 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00940000164201 ENSGT00940000155686.c ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964.d ENSGT00940000160964.c ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a Elapidae ANCESTRAL SPECIES 14 ENSGT00390000000141 #7 ENSGT00940000159611 #8 ENSGT00520000059318 #9 ENSGT00950000183121.b.b.b.a #10 ENSGT00530000063666.a #11 ENSGT00940000164237.ab ENSGT00390000008591 #15 ENSGT00940000159242 #16 ENSGT00940000161429 #18 ENSGT00390000017581.a ENSGT00940000164351 ENSGT00390000011425.A #19 ENSGT00940000165353 ENSGT00940000156017 #20 ENSGT00950000182802.D ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00950000183107.a.b.b #22 ENSGT01050000244948.d ENSGT00940000162488 #24 ENSGT00940000156837.w ENSGT00950000182832.D.b #25 ENSGT00940000161206 #26 ENSGT00950000183115.b.b #27 ENSGT01100000263536.A.a.b ##29 ENSGT01100000263536.A.a.a.c #29 ENSGT01100000263536.A.a.a.d #29 ENSGT01040000240444.A.a.a.a.b #31 ENSGT00990000203619.B ENSGT00940000163592 #35 ENSGT00510000047611 Indian cobra DUPLICATION Indian cobra MODERN SPECIES 4 RIPK4 (ENSNNAG00000014451) TMPRSS2 (ENSNNAG00000014479) ENSNNAG00000014519 ENSNNAG00000014530 FAM3B (ENSNNAG00000014550) BACE2 (ENSNNAG00000014576) DSCAM (ENSNNAG00000014616) PCP4 (ENSNNAG00000014905) ENSNNAG00000014920 ENSNNAG00000014931 SH3BGR (ENSNNAG00000014946) LCA5L (ENSNNAG00000014964) GET1 (ENSNNAG00000014983) ENSNNAG00000014992 ENSNNAG00000015010 ##22 ENSNNAG00000015024 ##22 ENSNNAG00000015057 ETS2 (ENSNNAG00000015067) ERG (ENSNNAG00000015103) KCNJ15 (ENSNNAG00000015348) KCNJ6 (ENSNNAG00000015386) DYRK1A (ENSNNAG00000015401) VPS26C (ENSNNAG00000015478) ENSNNAG00000015490 PIGP (ENSNNAG00000004114) ENSNNAG00000004128 HLCS (ENSNNAG00000004191) SIM2 (ENSNNAG00000004801) CLDN14 (ENSNNAG00000004849) CHAF1B (ENSNNAG00000004860) MORC3 (ENSNNAG00000004969) Indian cobra MODERN SPECIES 4 PRDM15 (ENSNNAG00000014280) RIPK4 (ENSNNAG00000014451) TMPRSS2 (ENSNNAG00000014479) ENSNNAG00000014519 ENSNNAG00000014530 FAM3B (ENSNNAG00000014550) BACE2 (ENSNNAG00000014576) DSCAM (ENSNNAG00000014616) PCP4 (ENSNNAG00000014905) ENSNNAG00000014920 ENSNNAG00000014931 SH3BGR (ENSNNAG00000014946) LCA5L (ENSNNAG00000014964) GET1 (ENSNNAG00000014983) ENSNNAG00000014992 ENSNNAG00000015010 ##22 ENSNNAG00000015024 ##22 ENSNNAG00000015057 ETS2 (ENSNNAG00000015067) ERG (ENSNNAG00000015103) KCNJ15 (ENSNNAG00000015348) KCNJ6 (ENSNNAG00000015386) DYRK1A (ENSNNAG00000015401) VPS26C (ENSNNAG00000015478) ENSNNAG00000015490 PIGP (ENSNNAG00000004114) ENSNNAG00000004128 HLCS (ENSNNAG00000004191) SIM2 (ENSNNAG00000004801) CLDN14 (ENSNNAG00000004849) CHAF1B (ENSNNAG00000004860) Elapidae_a ANCESTRAL SPECIES 12 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000182802.D ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408.e ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a Acanthophiinae ANCESTRAL SPECIES 14 ENSGT00560000077266.b ENSGT00940000165905 ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408.e ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a Eastern brown snake MODERN SPECIES 14 ENSPTXG00000005901 ENSPTXG00000005902 ENSPTXG00000005903 BRWD1 (ENSPTXG00000005904) ##22 ETS2 (ENSPTXG00000012342) ERG (ENSPTXG00000012344) KCNJ15 (ENSPTXG00000012347) KCNJ6 (ENSPTXG00000012349) DYRK1A (ENSPTXG00000012350) ENSPTXG00000012351 VPS26C (ENSPTXG00000012353) ENSPTXG00000012354 ENSPTXG00000000065 PIGP (ENSPTXG00000000100) HLCS (ENSPTXG00000000119) SIM2 (ENSPTXG00000000149) ENSPTXG00000000168 ENSPTXG00000000176 CHAF1B (ENSPTXG00000000200) Mainland tiger snake MODERN SPECIES 7 ENSNSUG00000017861 ENSNSUG00000017860 ENSNSUG00000017859 BRWD1 (ENSNSUG00000017858) ##22 ENSNSUG00000017857 ETS2 (ENSNSUG00000017856) ERG (ENSNSUG00000017833) KCNJ15 (ENSNSUG00000017828) KCNJ6 (ENSNSUG00000017826) DYRK1A (ENSNSUG00000017825) VPS26C (ENSNSUG00000017824) ENSNSUG00000017821 PIGP (ENSNSUG00000017820) HLCS (ENSNSUG00000017807) SIM2 (ENSNSUG00000017806) CLDN14 (ENSNSUG00000017790) CHAF1B (ENSNSUG00000017788) MORC3 (ENSNSUG00000017787) ENSNSUG00000017786 Blue-lipped sea krait MODERN SPECIES 569 LCA5L (ENSLLTG00000009053) GET1 (ENSLLTG00000009032) ENSLLTG00000009005 BRWD1 (ENSLLTG00000008918) ##22 Lizard MODERN SPECIES 2 FAM3B (ENSACAG00000001496) BACE2 (ENSACAG00000005800) ENSACAG00000045102 ENSACAG00000041995 DSCAM (ENSACAG00000005358) ENSACAG00000042918 ENSACAG00000036222 ENSACAG00000028616 ENSACAG00000005415 ENSACAG00000037008 ENSACAG00000005416 ENSACAG00000037146 SH3BGR (ENSACAG00000005419) LCA5L (ENSACAG00000005442) GET1 (ENSACAG00000005451) BRWD1 (ENSACAG00000005460) ##22 ENSACAG00000041068 ENSACAG00000045094 ETS2 (ENSACAG00000009269) ERG (ENSACAG00000009199) KCNJ15 (ENSACAG00000036984) ENSACAG00000041054 KCNJ6 (ENSACAG00000009168) DYRK1A (ENSACAG00000009116) ENSACAG00000039859 VPS26C (ENSACAG00000009090) ENSACAG00000035690 ENSACAG00000027720 PIGP (ENSACAG00000008861) HLCS (ENSACAG00000008830) ENSACAG00000034650 Archelosauria ANCESTRAL SPECIES ENSGT00940000157890 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00940000155686.c ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Cryptodira ANCESTRAL SPECIES ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00940000155686.c ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000185616 ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Chinese turtle MODERN SPECIES 174 ENSPSIG00000015622 SH3BGR (ENSPSIG00000015636) ENSPSIG00000015750 ENSPSIG00000001133 ENSPSIG00000015793 GET1 (ENSPSIG00000005886) ENSPSIG00000005890 BRWD1 (ENSPSIG00000005903) ##22 PSMG1 (ENSPSIG00000007201) ETS2 (ENSPSIG00000007985) ERG (ENSPSIG00000008476) KCNJ15 (ENSPSIG00000009303) Testudinoidea ANCESTRAL SPECIES 1 ENSGT00940000155207.a.b ENSGT00940000155686.d.a ENSGT00940000155686.d.b ENSGT00940000155686.c.e ENSGT00940000155686.c.f ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000185616 ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Emydidae ANCESTRAL SPECIES 28 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d.a ENSGT00940000155686.d.b ENSGT00940000155686.c.e ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000185616 ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 10 ENSTMTG00000014892 ENSTMTG00000014933 ENSTMTG00000014957 ENSTMTG00000014978 ENSTMTG00000015032 ENSTMTG00000015041 ENSTMTG00000015076 ENSTMTG00000015411 ENSTMTG00000015422 ENSTMTG00000015467 ENSTMTG00000015776 ENSTMTG00000015787 ENSTMTG00000015795 ENSTMTG00000015810 ENSTMTG00000015816 ENSTMTG00000015835 ##22 ENSTMTG00000015854 ENSTMTG00000015865 ENSTMTG00000015878 ENSTMTG00000015909 ENSTMTG00000016192 ENSTMTG00000016204 ENSTMTG00000016213 ENSTMTG00000016249 ENSTMTG00000016281 ENSTMTG00000016296 ENSTMTG00000016311 ENSTMTG00000016329 ENSTMTG00000016364 ENSTMTG00000016409 ENSTMTG00000016429 Three-toed box turtle MODERN SPECIES 11 ENSTMTG00000021482 ENSTMTG00000021533 ENSTMTG00000021549 ENSTMTG00000021556 ENSTMTG00000021559 ENSTMTG00000021573 ENSTMTG00000021576 ENSTMTG00000021585 ENSTMTG00000021619 ENSTMTG00000021626 ENSTMTG00000021646 ENSTMTG00000021726 ENSTMTG00000021729 ENSTMTG00000021734 ENSTMTG00000021738 ENSTMTG00000021797 ##22 ENSTMTG00000022059 ENSTMTG00000022062 ENSTMTG00000022067 ENSTMTG00000022073 ENSTMTG00000022076 ENSTMTG00000022077 ENSTMTG00000022082 ENSTMTG00000022091 ENSTMTG00000022098 ENSTMTG00000022101 ENSTMTG00000022111 ENSTMTG00000022119 ENSTMTG00000022125 ENSTMTG00000022128 ENSTMTG00000022139 painted turtle MODERN SPECIES 2389 RIPK4 (ENSCPBG00000012906) TMPRSS2 (ENSCPBG00000012905) ENSCPBG00000012892 ENSCPBG00000012852 ENSCPBG00000012848 FAM3B (ENSCPBG00000012846) BACE2 (ENSCPBG00000012845) DSCAM (ENSCPBG00000012456) PCP4 (ENSCPBG00000012442) IGSF5 (ENSCPBG00000012436) B3GALT5 (ENSCPBG00000012433) SH3BGR (ENSCPBG00000012430) LCA5L (ENSCPBG00000012429) GET1 (ENSCPBG00000012428) ENSCPBG00000012425 BRWD1 (ENSCPBG00000012420) ##22 PSMG1 (ENSCPBG00000012418) ETS2 (ENSCPBG00000012415) ERG (ENSCPBG00000012403) KCNJ15 (ENSCPBG00000012399) KCNJ6 (ENSCPBG00000012397) DYRK1A (ENSCPBG00000012395) Testudinidae ANCESTRAL SPECIES 6 ENSGT00940000159280 ENSGT00940000164440 ENSGT00940000154800 ENSGT00940000159520.g.b ENSGT00390000009189 ENSGT00950000182836.a ENSGT00940000160921 ENSGT00940000158182 ENSGT00950000186173 ENSGT00940000159274 ENSGT00950000183114.a.a ENSGT01030000234517.H.b ENSGT00940000156810 ENSGT00940000157923 ENSGT00940000156764.a ENSGT00950000183107.a.b.a ##22 ENSGT00390000008003 ENSGT00940000156058 ENSGT00390000003188 ENSGT00940000162190 ENSGT00530000063651.a ENSGT01100000263504.a.b.a.a ENSGT00530000063402.b ENSGT00390000010056 ENSGT00940000159576 ENSGT00390000002210.d ENSGT00390000018505 ENSGT00940000157376 ENSGT00390000000417.a.a.b.a.b ENSGT00940000165101 ENSGT00390000000412 Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES PRDM15 (ENSGEVG00005001471) ENSGEVG00005001504 RIPK4 (ENSGEVG00005001522) ENSGEVG00005001544 ENSGEVG00005001562 ENSGEVG00005001600 ENSGEVG00005001700 FAM3B (ENSGEVG00005001801) BACE2 (ENSGEVG00005001818) DSCAM (ENSGEVG00005001860) PCP4 (ENSGEVG00005001894) B3GALT5 (ENSGEVG00005001907) SH3BGR (ENSGEVG00005001914) LCA5L (ENSGEVG00005001928) GET1 (ENSGEVG00005001943) BRWD1 (ENSGEVG00005002258) ##22 PSMG1 (ENSGEVG00005002870) ETS2 (ENSGEVG00005002886) ERG (ENSGEVG00005002947) KCNJ15 (ENSGEVG00005003045) KCNJ6 (ENSGEVG00005003053) DYRK1A (ENSGEVG00005003065) VPS26C (ENSGEVG00005003088) TTC3 (ENSGEVG00005003139) PIGP (ENSGEVG00005003209) ENSGEVG00005003219 HLCS (ENSGEVG00005003229) SIM2 (ENSGEVG00005003239) CLDN14 (ENSGEVG00005003252) CHAF1B (ENSGEVG00005003264) MORC3 (ENSGEVG00005003292) Goode s thornscrub tortoise MODERN SPECIES 17 ENSGEVG00005013417 YPEL5 (ENSGEVG00005013457) ENSGEVG00005013504 LBH (ENSGEVG00005013637) LCLAT1 (ENSGEVG00005013658) ENSGEVG00005013678 GALNT14 (ENSGEVG00005013754) ENSGEVG00005014063 EHD3 (ENSGEVG00005014115) XDH (ENSGEVG00005014160) ENSGEVG00005014287 CDC42BPA (ENSGEVG00005014464) COQ8A (ENSGEVG00005014517) PSEN2 (ENSGEVG00005014558) ITPKB (ENSGEVG00005014643) ENSGEVG00005014678 ##22 STUM (ENSGEVG00005014790) PARP1 (ENSGEVG00005014820) LIN9 (ENSGEVG00005014867) MIXL1 (ENSGEVG00005014953) ACBD3 (ENSGEVG00005015002) ENSGEVG00005015026 SDE2 (ENSGEVG00005015082) ENSGEVG00005015097 TMEM63A (ENSGEVG00005015156) EPHX1 (ENSGEVG00005015263) SRP9 (ENSGEVG00005015297) ENAH (ENSGEVG00005015322) LBR (ENSGEVG00005015360) ENSGEVG00005015386 ENSGEVG00005015408 Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 1541 B3GALT5 (ENSCABG00000020022) SH3BGR (ENSCABG00000020023) LCA5L (ENSCABG00000020026) GET1 (ENSCABG00000020027) ENSCABG00000020028 BRWD1 (ENSCABG00000020030) ##22 ENSCABG00000020044 PSMG1 (ENSCABG00000020045) Abingdon island giant tortoise MODERN SPECIES 2562 ENSCABG00000002545 ##22 STUM (ENSCABG00000002541) PARP1 (ENSCABG00000001409) LIN9 (ENSCABG00000001228) ACBD3 (ENSCABG00000001213) Archosauria ANCESTRAL SPECIES 2 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00940000155686.c ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Australian saltwater crocodile MODERN SPECIES 27 RIPK4 (ENSCPRG00005016165) TMPRSS2 (ENSCPRG00005016148) ENSCPRG00005016141 ENSCPRG00005016133 ENSCPRG00005016122 FAM3B (ENSCPRG00005016105) BACE2 (ENSCPRG00005016096) DSCAM (ENSCPRG00005016058) PCP4 (ENSCPRG00005016038) B3GALT5 (ENSCPRG00005016029) ENSCPRG00005016026 ENSCPRG00005016025 LCA5L (ENSCPRG00005016022) ENSCPRG00005016020 ENSCPRG00005016019 BRWD1 (ENSCPRG00005015859) ##22 PSMG1 (ENSCPRG00005015780) ETS2 (ENSCPRG00005015772) ERG (ENSCPRG00005015767) KCNJ15 (ENSCPRG00005015763) KCNJ6 (ENSCPRG00005015758) DYRK1A (ENSCPRG00005015754) VPS26C (ENSCPRG00005015739) ENSCPRG00005015735 PIGP (ENSCPRG00005015731) HLCS (ENSCPRG00005015723) SIM2 (ENSCPRG00005015715) CLDN14 (ENSCPRG00005015707) CHAF1B (ENSCPRG00005015702) MORC3 (ENSCPRG00005015696) DOP1B (ENSCPRG00005015322) Aves ANCESTRAL SPECIES ENSGT00530000063764.a ENSGT00940000157890 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 African ostrich DUPLICATION African ostrich MODERN SPECIES 769 PRDM15 (ENSSCUG00000012056) ENSSCUG00000012048 RIPK4 (ENSSCUG00000012044) TMPRSS2 (ENSSCUG00000012041) MX1 (ENSSCUG00000012037) FAM3B (ENSSCUG00000012033) BACE2 (ENSSCUG00000012025) DSCAM (ENSSCUG00000011964) PCP4 (ENSSCUG00000011946) ENSSCUG00000011943 B3GALT5 (ENSSCUG00000011940) SH3BGR (ENSSCUG00000011939) LCA5L (ENSSCUG00000011937) GET1 (ENSSCUG00000011935) ENSSCUG00000011932 ##22 ENSSCUG00000011927 ##22 PSMG1 (ENSSCUG00000011926) ETS2 (ENSSCUG00000011923) ERG (ENSSCUG00000011922) KCNJ15 (ENSSCUG00000011919) KCNJ6 (ENSSCUG00000011913) DYRK1A (ENSSCUG00000011910) African ostrich MODERN SPECIES 769 C2CD2 (ENSSCUG00000012063) PRDM15 (ENSSCUG00000012056) ENSSCUG00000012048 RIPK4 (ENSSCUG00000012044) TMPRSS2 (ENSSCUG00000012041) MX1 (ENSSCUG00000012037) FAM3B (ENSSCUG00000012033) BACE2 (ENSSCUG00000012025) DSCAM (ENSSCUG00000011964) PCP4 (ENSSCUG00000011946) ENSSCUG00000011943 B3GALT5 (ENSSCUG00000011940) SH3BGR (ENSSCUG00000011939) LCA5L (ENSSCUG00000011937) GET1 (ENSSCUG00000011935) ENSSCUG00000011932 ##22 ENSSCUG00000011927 ##22 PSMG1 (ENSSCUG00000011926) ETS2 (ENSSCUG00000011923) ERG (ENSSCUG00000011922) KCNJ15 (ENSSCUG00000011919) KCNJ6 (ENSSCUG00000011913) DYRK1A (ENSSCUG00000011910) Neognathae ANCESTRAL SPECIES 1 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Galloanserae ANCESTRAL SPECIES 1 ENSGT00940000157890 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Phasianidae ANCESTRAL SPECIES ENSGT00940000161028 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Phasianidae_b ANCESTRAL SPECIES ENSGT00940000161028 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000164201 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Turkey MODERN SPECIES ENSMGAG00000014572 ENSMGAG00000014567 ENSMGAG00000017801 ENSMGAG00000014565 ENSMGAG00000014566 ENSMGAG00000014568 ENSMGAG00000020084 ENSMGAG00000014569 ENSMGAG00000016169 DSCAM (ENSMGAG00000014563) IGSF5 (ENSMGAG00000014560) B3GALT5 (ENSMGAG00000022407) SH3BGR (ENSMGAG00000014561) LCA5L (ENSMGAG00000014559) GET1 (ENSMGAG00000014558) BRWD1 (ENSMGAG00000014556) ##22 PSMG1 (ENSMGAG00000014555) ETS2 (ENSMGAG00000014554) ERG (ENSMGAG00000014553) KCNJ15 (ENSMGAG00000016167) KCNJ6 (ENSMGAG00000014552) DYRK1A (ENSMGAG00000014551) VPS26C (ENSMGAG00000014550) ENSMGAG00000014549 ENSMGAG00000018948 PIGP (ENSMGAG00000022533) RIPPLY3 (ENSMGAG00000019709) HLCS (ENSMGAG00000014546) SIM2 (ENSMGAG00000014545) CLDN14 (ENSMGAG00000014543) CHAF1B (ENSMGAG00000014544) Chicken MODERN SPECIES PRDM15 (ENSGALG00010010948) RIPK4 (ENSGALG00010010941) TMPRSS2 (ENSGALG00010013833) MX1 (ENSGALG00010013809) ENSGALG00010013778 FAM3B (ENSGALG00010013758) BACE2 (ENSGALG00010013650) DSCAM (ENSGALG00010013589) PCP4 (ENSGALG00010013549) IGSF5 (ENSGALG00010013504) B3GALT5 (ENSGALG00010013492) SH3BGR (ENSGALG00010013457) LCA5L (ENSGALG00010013449) WRB (ENSGALG00010013413) HMGN1 (ENSGALG00010013391) BRWD1 (ENSGALG00010014738) ##22 PSMG1 (ENSGALG00010013375) ETS2 (ENSGALG00010013349) ERG (ENSGALG00010013330) KCNJ15 (ENSGALG00010013304) KCNJ6 (ENSGALG00010013205) DYRK1A (ENSGALG00010013181) DSCR3 (ENSGALG00010013168) TTC3 (ENSGALG00010013135) PIGP (ENSGALG00010013114) RIPPLY3 (ENSGALG00010013109) HLCS (ENSGALG00010013104) SIM2 (ENSGALG00010013099) CLDN14 (ENSGALG00010013096) CHAF1B (ENSGALG00010013082) MORC4 (ENSGALG00010013037) Japanese quail MODERN SPECIES PRDM15 (ENSCJPG00005008658) RIPK4 (ENSCJPG00005008656) TMPRSS2 (ENSCJPG00005008655) MX2 (ENSCJPG00005008653) FAM3B (ENSCJPG00005008650) BACE2 (ENSCJPG00005008649) ENSCJPG00005008648 DSCAM (ENSCJPG00005008335) PCP4 (ENSCJPG00005008270) IGSF5 (ENSCJPG00005008268) B3GALT5 (ENSCJPG00005008266) SH3BGR (ENSCJPG00005008263) LCA5L (ENSCJPG00005008251) GET1 (ENSCJPG00005008185) ENSCJPG00005008183 BRWD1 (ENSCJPG00005007977) ##22 PSMG1 (ENSCJPG00005007970) ETS2 (ENSCJPG00005007967) ERG (ENSCJPG00005007939) KCNJ15 (ENSCJPG00005007938) KCNJ6 (ENSCJPG00005007874) ENSCJPG00005007872 DYRK1A (ENSCJPG00005007871) VPS26C (ENSCJPG00005007843) TTC3 (ENSCJPG00005007838) PIGP (ENSCJPG00005007837) HLCS (ENSCJPG00005007836) SIM2 (ENSCJPG00005007820) CLDN14 (ENSCJPG00005007818) CHAF1B (ENSCJPG00005007599) MORC3 (ENSCJPG00005007588) Anatidae ANCESTRAL SPECIES 6 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00940000163266 ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267.a ENSGT00940000163947.a ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00940000164489 ENSGT00950000183107.a.b.a ##22 ENSGT00950000185720 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 Pink-footed goose MODERN SPECIES 92 ENSABRG00000008465 RIPK4 (ENSABRG00000008447) TMPRSS2 (ENSABRG00000008407) ENSABRG00000008382 MX2 (ENSABRG00000008287) FAM3B (ENSABRG00000008237) BACE2 (ENSABRG00000008215) DSCAM (ENSABRG00000008016) PCP4 (ENSABRG00000007977) IGSF5 (ENSABRG00000007955) B3GALT5 (ENSABRG00000007941) SH3BGR (ENSABRG00000007927) LCA5L (ENSABRG00000007911) GET1 (ENSABRG00000007894) ENSABRG00000007815 BRWD1 (ENSABRG00000007702) ##22 PSMG1 (ENSABRG00000007673) ETS2 (ENSABRG00000007653) ERG (ENSABRG00000007601) KCNJ15 (ENSABRG00000007567) ENSABRG00000007532 KCNJ6 (ENSABRG00000007507) DYRK1A (ENSABRG00000007369) VPS26C (ENSABRG00000007303) PIGP (ENSABRG00000007271) HLCS (ENSABRG00000007232) SIM2 (ENSABRG00000007227) CLDN14 (ENSABRG00000007223) CHAF1B (ENSABRG00000007176) MORC3 (ENSABRG00000007044) DOP1B (ENSABRG00000005760) Duck DUPLICATION Duck MODERN SPECIES ENSAPLG00000016297 LAMTOR2 (ENSAPLG00000001483) ENSAPLG00000007792 ENSAPLG00000022874 ENSAPLG00000023391 TMEM47 (ENSAPLG00000007982) ENSAPLG00000028806 ENSAPLG00000022017 ENSAPLG00000030900 ENSAPLG00000014415 ENSAPLG00000019280 ENSAPLG00000018874 ENSAPLG00000021983 GET1 (ENSAPLG00000023365) ENSAPLG00000030604 ENSAPLG00000014570 ##22 ENSAPLG00000014951 ENSAPLG00000017761 ENSAPLG00000024773 ENSAPLG00000015271 ENSAPLG00000027981 ENSAPLG00000028827 DYRK1A (ENSAPLG00000011621) VPS26C (ENSAPLG00000011951) ENSAPLG00000012209 ENSAPLG00000028063 ENSAPLG00000019136 PIGP (ENSAPLG00000022878) RIPPLY3 (ENSAPLG00000019819) HLCS (ENSAPLG00000013775) SIM2 (ENSAPLG00000014050) Duck MODERN SPECIES SMS (ENSAPLG00000013124) MBTPS2 (ENSAPLG00000013395) SMPX (ENSAPLG00000018333) KLHL34 (ENSAPLG00000011718) CNKSR2 (ENSAPLG00000013780) RPS6KA3 (ENSAPLG00000014093) ENSAPLG00000019326 ENSAPLG00000029454 ENSAPLG00000011749 ENSAPLG00000017728 ENSAPLG00000021659 ENSAPLG00000011750 ENSAPLG00000022577 ENSAPLG00000018619 ENSAPLG00000019683 ENSAPLG00000019022 ##22 ENSAPLG00000017115 ENSAPLG00000019789 ENSAPLG00000015060 ENSAPLG00000022060 ENSAPLG00000031160 PRRG1 (ENSAPLG00000008867) LANCL3 (ENSAPLG00000008878) XK (ENSAPLG00000022338) CYBB (ENSAPLG00000008961) DYNLT3 (ENSAPLG00000031155) SYTL5 (ENSAPLG00000009713) ENSAPLG00000027765 SRPX (ENSAPLG00000009886) RPGR (ENSAPLG00000010057) OTC (ENSAPLG00000010113) Neognathae_b ANCESTRAL SPECIES ENSGT00530000063764.a ENSGT00940000157890 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Neognathae_c ANCESTRAL SPECIES 4 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00870000136508.c.b ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a Golden eagle MODERN SPECIES 23 PRDM15 (ENSACCG00020007436) ENSACCG00020007388 RIPK4 (ENSACCG00020007325) TMPRSS2 (ENSACCG00020007290) MX1 (ENSACCG00020007248) FAM3B (ENSACCG00020007233) BACE2 (ENSACCG00020007183) DSCAM (ENSACCG00020007031) PCP4 (ENSACCG00020006869) IGSF5 (ENSACCG00020006845) B3GALT5 (ENSACCG00020006827) SH3BGR (ENSACCG00020006813) LCA5L (ENSACCG00020006800) GET1 (ENSACCG00020006786) ENSACCG00020006775 BRWD1 (ENSACCG00020006729) ##22 PSMG1 (ENSACCG00020006704) ETS2 (ENSACCG00020006692) ERG (ENSACCG00020006656) KCNJ15 (ENSACCG00020006619) KCNJ6 (ENSACCG00020006608) DYRK1A (ENSACCG00020006581) VPS26C (ENSACCG00020006549) TTC3 (ENSACCG00020006500) PIGP (ENSACCG00020006482) HLCS (ENSACCG00020006470) SIM2 (ENSACCG00020006453) CLDN14 (ENSACCG00020006442) CHAF1B (ENSACCG00020006425) MORC3 (ENSACCG00020006368) DOP1B (ENSACCG00020006295) Kakapo MODERN SPECIES 11 ZBTB21 (ENSSHBG00005019241) C2CD2 (ENSSHBG00005019235) PRDM15 (ENSSHBG00005019220) ENSSHBG00005019212 RIPK4 (ENSSHBG00005019208) TMPRSS2 (ENSSHBG00005019207) MX1 (ENSSHBG00005019205) FAM3B (ENSSHBG00005019204) BACE2 (ENSSHBG00005019201) DSCAM (ENSSHBG00005019146) PCP4 (ENSSHBG00005019137) B3GALT5 (ENSSHBG00005019133) SH3BGR (ENSSHBG00005019130) ENSSHBG00005019126 ENSSHBG00005019123 BRWD1 (ENSSHBG00005018061) ##22 PSMG1 (ENSSHBG00005017979) ETS2 (ENSSHBG00005017977) ERG (ENSSHBG00005017966) KCNJ15 (ENSSHBG00005017964) KCNJ6 (ENSSHBG00005017962) DYRK1A (ENSSHBG00005017956) VPS26C (ENSSHBG00005017954) ENSSHBG00005017947 ENSSHBG00005017941 ENSSHBG00005017936 ENSSHBG00005017924 PIGP (ENSSHBG00005017917) HLCS (ENSSHBG00005017906) SIM2 (ENSSHBG00005017903) CLDN14 (ENSSHBG00005017898) Passeriformes ANCESTRAL SPECIES 1 ENSGT00940000161028 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00730000111429 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Great tit MODERN SPECIES ENSPMJG00000010583 ZBTB21 (ENSPMJG00000010582) C2CD2 (ENSPMJG00000010580) PRDM15 (ENSPMJG00000010516) RIPK4 (ENSPMJG00000010510) TMPRSS2 (ENSPMJG00000010504) MX1 (ENSPMJG00000010501) BACE2 (ENSPMJG00000010499) DSCAM (ENSPMJG00000010433) PCP4 (ENSPMJG00000010310) IGSF5 (ENSPMJG00000010309) B3GALT5 (ENSPMJG00000010307) SH3BGR (ENSPMJG00000010241) GET1 (ENSPMJG00000010237) ENSPMJG00000010236 BRWD1 (ENSPMJG00000009831) ##22 PSMG1 (ENSPMJG00000009827) ETS2 (ENSPMJG00000009822) ERG (ENSPMJG00000009699) KCNJ15 (ENSPMJG00000009690) KCNJ6 (ENSPMJG00000009621) DYRK1A (ENSPMJG00000009547) VPS26C (ENSPMJG00000009544) TTC3 (ENSPMJG00000009526) PIGP (ENSPMJG00000009524) ENSPMJG00000009522 HLCS (ENSPMJG00000009520) SIM2 (ENSPMJG00000009456) CLDN14 (ENSPMJG00000009452) CHAF1B (ENSPMJG00000009451) MORC3 (ENSPMJG00000009450) Passeriformes_d ANCESTRAL SPECIES 1 ENSGT00940000161028 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960 ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a Flycatcher MODERN SPECIES ZBTB21 (ENSFALG00000002056) ENSFALG00000002057 PRDM15 (ENSFALG00000002064) RIPK4 (ENSFALG00000002070) TMPRSS2 (ENSFALG00000002079) MX1 (ENSFALG00000002094) FAM3B (ENSFALG00000002111) BACE2 (ENSFALG00000029036) DSCAM (ENSFALG00000004983) PCP4 (ENSFALG00000025034) IGSF5 (ENSFALG00000005004) B3GALT5 (ENSFALG00000005008) SH3BGR (ENSFALG00000005014) ENSFALG00000005019 GET1 (ENSFALG00000028042) BRWD1 (ENSFALG00000005039) ##22 PSMG1 (ENSFALG00000005056) ENSFALG00000026279 ETS2 (ENSFALG00000026706) ERG (ENSFALG00000005094) KCNJ15 (ENSFALG00000025214) KCNJ6 (ENSFALG00000023707) DYRK1A (ENSFALG00000024758) VPS26C (ENSFALG00000005166) ENSFALG00000005183 ENSFALG00000023874 ENSFALG00000026035 PIGP (ENSFALG00000005214) HLCS (ENSFALG00000005235) SIM2 (ENSFALG00000005247) CHAF1B (ENSFALG00000010423) Passeriformes_g ANCESTRAL SPECIES 2 ENSGT00940000161028 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960.f ENSGT00390000002960.e ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 Passeroidea ANCESTRAL SPECIES 10 ENSGT00940000161028 ENSGT00530000063764.a ENSGT00940000157890 ENSGT00940000159908 ENSGT00940000155207.a.b ENSGT00940000155686.d ENSGT00950000183004.a.b.a.b ENSGT00940000159548 ENSGT00940000154678.a.a ENSGT00530000064267 ENSGT00940000163947 ENSGT00940000160964 ENSGT00940000159847 ENSGT00560000077266.b ENSGT00390000008610.a.b.a.a.b ENSGT00950000183107.a.b.a ##22 ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408 ENSGT00950000183064.b ENSGT00940000154465.C ENSGT00390000013771 ENSGT00390000002960.e ENSGT00940000159985 ENSGT00940000161312 ENSGT00550000074968 ENSGT00940000160495 ENSGT00390000016421.b.a Zebra finch MODERN SPECIES ZBTB21 (ENSTGUG00000005526) C2CD2 (ENSTGUG00000005496) PRDM15 (ENSTGUG00000005437) RIPK4 (ENSTGUG00000005420) TMPRSS2 (ENSTGUG00000005348) MX1 (ENSTGUG00000005326) FAM3B (ENSTGUG00000005255) BACE2 (ENSTGUG00000005268) PCP4 (ENSTGUG00000005150) ENSTGUG00000021600 B3GALT5 (ENSTGUG00000005144) ENSTGUG00000005124 SH3BGR (ENSTGUG00000005133) GET1 (ENSTGUG00000005116) HMGN1 (ENSTGUG00000005112) BRWD1 (ENSTGUG00000005062) ##22 PSMG1 (ENSTGUG00000005059) ETS2 (ENSTGUG00000005028) ERG (ENSTGUG00000004998) KCNJ15 (ENSTGUG00000004997) KCNJ6 (ENSTGUG00000004993) DYRK1A (ENSTGUG00000004960) VPS26C (ENSTGUG00000027285) TTC3 (ENSTGUG00000004895) PIGP (ENSTGUG00000025829) HLCS (ENSTGUG00000005220) SIM2 (ENSTGUG00000004856) CLDN14 (ENSTGUG00000004853) CHAF1B (ENSTGUG00000004832) MORC3 (ENSTGUG00000004803) DOP1B (ENSTGUG00000004760) Common canary DUPLICATION Common canary MODERN SPECIES 11 ENSSCAG00000010506 ENSSCAG00000010509 DOP1B (ENSSCAG00000010522) MORC3 (ENSSCAG00000010568) CHAF1B (ENSSCAG00000010633) CLDN14 (ENSSCAG00000010639) SIM2 (ENSSCAG00000010649) ENSSCAG00000010696 ENSSCAG00000010713 ENSSCAG00000010716 B3GALT5 (ENSSCAG00000010720) SH3BGR (ENSSCAG00000010721) ENSSCAG00000010724 GET1 (ENSSCAG00000010727) ENSSCAG00000010730 ##22 ENSSCAG00000010735 ##22 PSMG1 (ENSSCAG00000010748) ETS2 (ENSSCAG00000010751) ERG (ENSSCAG00000010759) KCNJ15 (ENSSCAG00000010771) KCNJ6 (ENSSCAG00000010773) DYRK1A (ENSSCAG00000010775) VPS26C (ENSSCAG00000010780) ENSSCAG00000010806 ENSSCAG00000010829 PIGP (ENSSCAG00000010835) ENSSCAG00000010840 ENSSCAG00000010846 ENSSCAG00000010856 RCAN1 (ENSSCAG00000010862) KCNE1 (ENSSCAG00000010868) Common canary MODERN SPECIES 11 ENSSCAG00000010502 ENSSCAG00000010506 ENSSCAG00000010509 DOP1B (ENSSCAG00000010522) MORC3 (ENSSCAG00000010568) CHAF1B (ENSSCAG00000010633) CLDN14 (ENSSCAG00000010639) SIM2 (ENSSCAG00000010649) ENSSCAG00000010696 ENSSCAG00000010713 ENSSCAG00000010716 B3GALT5 (ENSSCAG00000010720) SH3BGR (ENSSCAG00000010721) ENSSCAG00000010724 GET1 (ENSSCAG00000010727) ENSSCAG00000010730 ##22 ENSSCAG00000010735 ##22 PSMG1 (ENSSCAG00000010748) ETS2 (ENSSCAG00000010751) ERG (ENSSCAG00000010759) KCNJ15 (ENSSCAG00000010771) KCNJ6 (ENSSCAG00000010773) DYRK1A (ENSSCAG00000010775) VPS26C (ENSSCAG00000010780) ENSSCAG00000010806 ENSSCAG00000010829 PIGP (ENSSCAG00000010835) ENSSCAG00000010840 ENSSCAG00000010846 ENSSCAG00000010856 RCAN1 (ENSSCAG00000010862) Medium ground finch DUPLICATION Medium ground finch MODERN SPECIES 270 SH3BGR (ENSGFOG00000006653) GET1 (ENSGFOG00000006644) ENSGFOG00000006602 ENSGFOG00000013978 ##22 ENSGFOG00000013974 ##22 PSMG1 (ENSGFOG00000013970) ETS2 (ENSGFOG00000013968) ERG (ENSGFOG00000013965) ENSGFOG00000013964 KCNJ15 (ENSGFOG00000013963) Medium ground finch MODERN SPECIES 270 SH3BGR (ENSGFOG00000006653) GET1 (ENSGFOG00000006644) ENSGFOG00000006602 ENSGFOG00000013978 ##22 ENSGFOG00000013974 ##22 PSMG1 (ENSGFOG00000013970) ETS2 (ENSGFOG00000013968) ERG (ENSGFOG00000013965) ENSGFOG00000013964 KCNJ15 (ENSGFOG00000013963) Elephant shark MODERN SPECIES 1740 ENSCMIG00000001320 ENSCMIG00000001977 ##22 ENSCMIG00000003192 ETS2 (ENSCMIG00000003195) erg (ENSCMIG00000003220) KCNJ15 (ENSCMIG00000003262) KCNJ6 (ENSCMIG00000003281) dyrk1ab (ENSCMIG00000003327) vps26c (ENSCMIG00000003446) ENSCMIG00000003458 ENSCMIG00000003468 ENSCMIG00000003472 Vertebrata ANCESTRAL SPECIES ENSGT00950000183107.a.a ##22 Gnathostomata ANCESTRAL SPECIES 541 ENSGT00560000077266.a ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 Elephant shark MODERN SPECIES 1698 LCA5 (ENSCMIG00000011101) PHIP (ENSCMIG00000011238) ##22 ENSCMIG00000011595 IRAK1BP1 (ENSCMIG00000011597) ENSCMIG00000011600 tbx18 (ENSCMIG00000011602) ENSCMIG00000011605 CEP162 (ENSCMIG00000011607) MRAP2 (ENSCMIG00000011612) ENSCMIG00000011619 Euteleostomi ANCESTRAL SPECIES 183 ENSGT00940000175861 ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000169423.a ENSGT00940000171557 ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 Sarcopterygii ANCESTRAL SPECIES 259 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000169423.a ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 Tetrapoda ANCESTRAL SPECIES 4 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B ENSGT00400000024746 Amniota ANCESTRAL SPECIES 1 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b Sauria ANCESTRAL SPECIES 1 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a Lepidosauria ANCESTRAL SPECIES ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a ENSGT00390000011297 Episquamata ANCESTRAL SPECIES ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a ENSGT00390000011297 Laterata ANCESTRAL SPECIES 4 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a ENSGT00390000011297 ENSGT01050000244827.E Common wall lizard MODERN SPECIES 11 PGM3 (ENSPMRG00000004289) DOP1A (ENSPMRG00000004235) UBE3D (ENSPMRG00000004211) TPBG (ENSPMRG00000004204) IBTK (ENSPMRG00000004185) TENT5A (ENSPMRG00000004176) BCKDHB (ENSPMRG00000004157) ENSPMRG00000004149 TTK (ENSPMRG00000004111) ELOVL4 (ENSPMRG00000004099) ENSPMRG00000004097 SH3BGRL2 (ENSPMRG00000004094) LCA5 (ENSPMRG00000004086) HMGN3 (ENSPMRG00000004081) ENSPMRG00000004079 PHIP (ENSPMRG00000004065) ##22 IRAK1BP1 (ENSPMRG00000004058) ENSPMRG00000007843 HTR1B (ENSPMRG00000007840) IMPG1 (ENSPMRG00000007835) MYO6 (ENSPMRG00000007794) ENSPMRG00000007771 FILIP1 (ENSPMRG00000007757) TMEM30A (ENSPMRG00000007751) COX7A2 (ENSPMRG00000007746) COL12A1 (ENSPMRG00000006545) ENSPMRG00000006320 ENSPMRG00000006317 CD109 (ENSPMRG00000006306) SLC17A5 (ENSPMRG00000006281) ENSPMRG00000006270 Argentine black and white tegu MODERN SPECIES 9 ME1 (ENSSMRG00000017463) RWDD2A (ENSSMRG00000017462) PGM3 (ENSSMRG00000017458) DOP1A (ENSSMRG00000017453) UBE3D (ENSSMRG00000017451) TPBG (ENSSMRG00000017450) IBTK (ENSSMRG00000017447) TENT5A (ENSSMRG00000017433) ENSSMRG00000017425 BCKDHB (ENSSMRG00000017421) TTK (ENSSMRG00000017415) ELOVL4 (ENSSMRG00000017411) SH3BGRL2 (ENSSMRG00000017398) LCA5 (ENSSMRG00000017397) ENSSMRG00000017396 PHIP (ENSSMRG00000017388) ##22 IRAK1BP1 (ENSSMRG00000017382) MEI4 (ENSSMRG00000017372) HTR1B (ENSSMRG00000017367) IMPG1 (ENSSMRG00000017353) MYO6 (ENSSMRG00000015441) SENP6 (ENSSMRG00000015440) ENSSMRG00000015439 FILIP1 (ENSSMRG00000015438) TMEM30A (ENSSMRG00000015437) ENSSMRG00000015436 COL12A1 (ENSSMRG00000015435) ENSSMRG00000015434 ENSSMRG00000015433 CD109 (ENSSMRG00000015429) SLC17A5 (ENSSMRG00000015428) Toxicofera ANCESTRAL SPECIES ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a ENSGT00390000011297 Elapidae ANCESTRAL SPECIES ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b.yb ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a ENSGT00940000163653 Elapidae_a ANCESTRAL SPECIES 6 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b.yb ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00960000189507 ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a ENSGT00940000163653 ENSGT00940000155933.b.a Blue-lipped sea krait DUPLICATION Blue-lipped sea krait MODERN SPECIES 8642 ENSLLTG00000005935 ##22 Blue-lipped sea krait MODERN SPECIES 7218 ENSLLTG00000013772 ##22 IRAK1BP1 (ENSLLTG00000013743) Acanthophiinae ANCESTRAL SPECIES 8 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b.yb ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00960000189507 ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a ENSGT00940000163653 ENSGT00940000155933.b.a Mainland tiger snake MODERN SPECIES 11 ME1 (ENSNSUG00000001693) RWDD2A (ENSNSUG00000002527) PGM3 (ENSNSUG00000002528) ENSNSUG00000002671 ENSNSUG00000002673 ENSNSUG00000002678 TPBG (ENSNSUG00000002680) IBTK (ENSNSUG00000002686) TENT5A (ENSNSUG00000005021) BCKDHB (ENSNSUG00000005022) ENSNSUG00000005025 ELOVL4 (ENSNSUG00000005027) SH3BGRL2 (ENSNSUG00000005043) LCA5 (ENSNSUG00000005044) HMGN3 (ENSNSUG00000005051) PHIP (ENSNSUG00000005055) ##22 IRAK1BP1 (ENSNSUG00000005064) MEI4 (ENSNSUG00000005066) HTR1B (ENSNSUG00000005068) IMPG1 (ENSNSUG00000005071) MYO6 (ENSNSUG00000005074) SENP6 (ENSNSUG00000005359) ENSNSUG00000005361 FILIP1 (ENSNSUG00000005362) TMEM30A (ENSNSUG00000005365) COX7A2 (ENSNSUG00000005370) COL12A1 (ENSNSUG00000005375) CD109 (ENSNSUG00000005383) SLC17A5 (ENSNSUG00000005418) ENSNSUG00000005422 ENSNSUG00000005425 Eastern brown snake MODERN SPECIES 4 PRSS35 (ENSPTXG00000008674) ME1 (ENSPTXG00000008675) RWDD2A (ENSPTXG00000002878) PGM3 (ENSPTXG00000002879) DOP1A (ENSPTXG00000002880) ENSPTXG00000002881 UBE3D (ENSPTXG00000002882) TPBG (ENSPTXG00000002884) IBTK (ENSPTXG00000002886) TENT5A (ENSPTXG00000002891) BCKDHB (ENSPTXG00000002892) ENSPTXG00000002893 ELOVL4 (ENSPTXG00000002894) SH3BGRL2 (ENSPTXG00000002897) LCA5 (ENSPTXG00000002898) PHIP (ENSPTXG00000002914) ##22 IRAK1BP1 (ENSPTXG00000005436) MEI4 (ENSPTXG00000005437) HTR1B (ENSPTXG00000005445) IMPG1 (ENSPTXG00000005446) MYO6 (ENSPTXG00000005448) SENP6 (ENSPTXG00000005463) FILIP1 (ENSPTXG00000005465) TMEM30A (ENSPTXG00000005466) COX7A2 (ENSPTXG00000005469) COL12A1 (ENSPTXG00000005498) CD109 (ENSPTXG00000008492) ENSPTXG00000008765 SLC17A5 (ENSPTXG00000008769) ENSPTXG00000008773 ENSPTXG00000008775 Indian cobra MODERN SPECIES RWDD2A (ENSNNAG00000008445) PGM3 (ENSNNAG00000008499) DOP1A (ENSNNAG00000008644) UBE3D (ENSNNAG00000009266) TPBG (ENSNNAG00000009369) IBTK (ENSNNAG00000009397) TENT5A (ENSNNAG00000009655) ENSNNAG00000009677 ENSNNAG00000009707 BCKDHB (ENSNNAG00000009730) TTK (ENSNNAG00000009789) ELOVL4 (ENSNNAG00000009871) SH3BGRL2 (ENSNNAG00000009914) LCA5 (ENSNNAG00000009953) HMGN3 (ENSNNAG00000010069) PHIP (ENSNNAG00000010311) ##22 IRAK1BP1 (ENSNNAG00000013617) MEI4 (ENSNNAG00000013636) HTR1B (ENSNNAG00000013668) IMPG1 (ENSNNAG00000013694) MYO6 (ENSNNAG00000013883) SENP6 (ENSNNAG00000014172) FILIP1 (ENSNNAG00000014322) TMEM30A (ENSNNAG00000014377) COX7A2 (ENSNNAG00000014396) COL12A1 (ENSNNAG00000014417) ENSNNAG00000014537 CD109 (ENSNNAG00000014548) SLC17A5 (ENSNNAG00000014667) ENSNNAG00000014749 ENSNNAG00000014788 Lizard MODERN SPECIES PGM3 (ENSACAG00000017288) DOP1A (ENSACAG00000017307) UBE3D (ENSACAG00000023044) TPBG (ENSACAG00000039941) IBTK (ENSACAG00000017326) TENT5A (ENSACAG00000034830) BCKDHB (ENSACAG00000017347) ENSACAG00000017366 TTK (ENSACAG00000017368) ENSACAG00000029468 ENSACAG00000045252 ELOVL4 (ENSACAG00000017409) SH3BGRL2 (ENSACAG00000017424) LCA5 (ENSACAG00000004563) ENSACAG00000004584 PHIP (ENSACAG00000004587) ##22 IRAK1BP1 (ENSACAG00000004784) ENSACAG00000040713 ENSACAG00000040681 MEI4 (ENSACAG00000029103) HTR1B (ENSACAG00000004801) ENSACAG00000036259 IMPG1 (ENSACAG00000004815) MYO6 (ENSACAG00000004838) SENP6 (ENSACAG00000004989) FILIP1 (ENSACAG00000005030) TMEM30A (ENSACAG00000005057) COX7A2 (ENSACAG00000042418) COL12A1 (ENSACAG00000005078) ENSACAG00000038008 ENSACAG00000044694 tuatara MODERN SPECIES 561 BCKDHB (ENSSPUG00000005703) TTK (ENSSPUG00000005448) ELOVL4 (ENSSPUG00000005390) SH3BGRL2 (ENSSPUG00000005382) LCA5 (ENSSPUG00000005365) HMGN3 (ENSSPUG00000005358) PHIP (ENSSPUG00000004972) ##22 IRAK1BP1 (ENSSPUG00000004926) Archelosauria ANCESTRAL SPECIES 1 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a ENSGT00940000171801 Archosauria ANCESTRAL SPECIES 3 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.d ENSGT00390000011297 Aves ANCESTRAL SPECIES 10 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.d ENSGT00390000011297 Neognathae ANCESTRAL SPECIES 2 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.d ENSGT00390000011297 Neognathae_b ANCESTRAL SPECIES 1 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.d ENSGT00390000011297 Neognathae_c ANCESTRAL SPECIES 10 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.d ENSGT00390000011297 Golden eagle MODERN SPECIES 11 ME1 (ENSACCG00020003662) RWDD2A (ENSACCG00020003686) PGM3 (ENSACCG00020003704) DOP1A (ENSACCG00020003756) UBE3D (ENSACCG00020003821) TPBG (ENSACCG00020003845) IBTK (ENSACCG00020003863) TENT5A (ENSACCG00020003876) BCKDHB (ENSACCG00020003883) ENSACCG00020003894 TTK (ENSACCG00020003925) ELOVL4 (ENSACCG00020003950) SH3BGRL2 (ENSACCG00020003959) LCA5 (ENSACCG00020003963) HMGN3 (ENSACCG00020003976) PHIP (ENSACCG00020004170) ##22 IRAK1BP1 (ENSACCG00020004322) MEI4 (ENSACCG00020004333) HTR1B (ENSACCG00020004337) IMPG1 (ENSACCG00020004348) MYO6 (ENSACCG00020004460) SENP6 (ENSACCG00020004547) FILIP1 (ENSACCG00020004575) TMEM30A (ENSACCG00020004591) COX7A2 (ENSACCG00020004599) COL12A1 (ENSACCG00020005240) CD109 (ENSACCG00020006357) SLC17A5 (ENSACCG00020006535) EEF1A1 (ENSACCG00020006558) MTO1 (ENSACCG00020006568) CGAS (ENSACCG00020006584) Kakapo MODERN SPECIES 23 PGM3 (ENSSHBG00005003444) ENSSHBG00005003461 ENSSHBG00005003479 ENSSHBG00005003489 UBE3D (ENSSHBG00005003494) TPBG (ENSSHBG00005003508) IBTK (ENSSHBG00005003559) TENT5A (ENSSHBG00005003616) BCKDHB (ENSSHBG00005003634) ENSSHBG00005003644 TTK (ENSSHBG00005003670) ELOVL4 (ENSSHBG00005003690) SH3BGRL2 (ENSSHBG00005003700) LCA5 (ENSSHBG00005003712) HMGN3 (ENSSHBG00005003735) PHIP (ENSSHBG00005003926) ##22 ENSSHBG00005004156 IRAK1BP1 (ENSSHBG00005004166) MEI4 (ENSSHBG00005004176) HTR1B (ENSSHBG00005004192) IMPG1 (ENSSHBG00005004207) MYO6 (ENSSHBG00005004296) SENP6 (ENSSHBG00005004407) FILIP1 (ENSSHBG00005004432) TMEM30A (ENSSHBG00005004441) COX7A2 (ENSSHBG00005004450) COL12A1 (ENSSHBG00005004710) CD109 (ENSSHBG00005007760) SLC17A5 (ENSSHBG00005008721) EEF1A1 (ENSSHBG00005008734) MTO1 (ENSSHBG00005008741) Passeriformes ANCESTRAL SPECIES 2 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.d ENSGT00390000011297 Great tit MODERN SPECIES 22 ME1 (ENSPMJG00000003522) RWDD2A (ENSPMJG00000003523) PGM3 (ENSPMJG00000003525) DOP1A (ENSPMJG00000003539) UBE3D (ENSPMJG00000003546) TPBG (ENSPMJG00000003676) IBTK (ENSPMJG00000003678) TENT5A (ENSPMJG00000003710) BCKDHB (ENSPMJG00000003732) ENSPMJG00000003760 TTK (ENSPMJG00000003762) ELOVL4 (ENSPMJG00000003780) ENSPMJG00000003784 LCA5 (ENSPMJG00000003787) HMGN3 (ENSPMJG00000003813) PHIP (ENSPMJG00000003820) ##22 ENSPMJG00000005403 IRAK1BP1 (ENSPMJG00000005408) MEI4 (ENSPMJG00000005471) HTR1B (ENSPMJG00000005477) IMPG1 (ENSPMJG00000005495) MYO6 (ENSPMJG00000005506) SENP6 (ENSPMJG00000008075) FILIP1 (ENSPMJG00000008145) TMEM30A (ENSPMJG00000008155) COL12A1 (ENSPMJG00000008162) CD109 (ENSPMJG00000008447) SLC17A5 (ENSPMJG00000008453) EEF1A1 (ENSPMJG00000008454) MTO1 (ENSPMJG00000008492) CGAS (ENSPMJG00000008494) Passeriformes_d ANCESTRAL SPECIES 2 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00950000186266 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.d ENSGT00390000011297 Flycatcher MODERN SPECIES 21 ME1 (ENSFALG00000002717) RWDD2A (ENSFALG00000002704) PGM3 (ENSFALG00000002701) DOP1A (ENSFALG00000002694) UBE3D (ENSFALG00000002690) TPBG (ENSFALG00000002688) IBTK (ENSFALG00000002685) TENT5A (ENSFALG00000002682) BCKDHB (ENSFALG00000002679) ENSFALG00000002676 TTK (ENSFALG00000002669) ELOVL4 (ENSFALG00000024556) SH3BGRL2 (ENSFALG00000002663) LCA5 (ENSFALG00000002657) HMGN3 (ENSFALG00000026680) PHIP (ENSFALG00000002652) ##22 ENSFALG00000027212 IRAK1BP1 (ENSFALG00000028203) MEI4 (ENSFALG00000002644) HTR1B (ENSFALG00000014659) IMPG1 (ENSFALG00000002633) MYO6 (ENSFALG00000002581) SENP6 (ENSFALG00000002538) FILIP1 (ENSFALG00000002530) TMEM30A (ENSFALG00000002525) ENSFALG00000023016 COX7A2 (ENSFALG00000028269) COL12A1 (ENSFALG00000002497) CD109 (ENSFALG00000007075) SLC17A5 (ENSFALG00000007072) MTO1 (ENSFALG00000007061) Passeriformes_g ANCESTRAL SPECIES 1 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00950000186266 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.d ENSGT00390000011297 Medium ground finch MODERN SPECIES 31 RWDD2A (ENSGFOG00000012517) PGM3 (ENSGFOG00000012511) DOP1A (ENSGFOG00000012492) UBE3D (ENSGFOG00000012485) TPBG (ENSGFOG00000012481) IBTK (ENSGFOG00000012458) TENT5A (ENSGFOG00000012442) BCKDHB (ENSGFOG00000012437) ENSGFOG00000012434 TTK (ENSGFOG00000012412) ELOVL4 (ENSGFOG00000012403) SH3BGRL2 (ENSGFOG00000012402) ENSGFOG00000012397 LCA5 (ENSGFOG00000012389) HMGN3 (ENSGFOG00000012385) PHIP (ENSGFOG00000010921) ##22 IRAK1BP1 (ENSGFOG00000010838) MEI4 (ENSGFOG00000010831) HTR1B (ENSGFOG00000010828) IMPG1 (ENSGFOG00000010812) MYO6 (ENSGFOG00000010768) SENP6 (ENSGFOG00000010740) FILIP1 (ENSGFOG00000010729) TMEM30A (ENSGFOG00000010725) COX7A2 (ENSGFOG00000010721) COL12A1 (ENSGFOG00000010690) CD109 (ENSGFOG00000010625) SLC17A5 (ENSGFOG00000010616) EEF1A1 (ENSGFOG00000010613) MTO1 (ENSGFOG00000010591) ENSGFOG00000010573 Passeroidea ANCESTRAL SPECIES ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00950000186266 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.d ENSGT00390000011297 Zebra finch MODERN SPECIES 23 ME1 (ENSTGUG00000012540) RWDD2A (ENSTGUG00000023129) PGM3 (ENSTGUG00000012547) DOP1A (ENSTGUG00000012553) UBE3D (ENSTGUG00000012560) TPBG (ENSTGUG00000027098) IBTK (ENSTGUG00000012564) TENT5A (ENSTGUG00000021070) BCKDHB (ENSTGUG00000012570) TTK (ENSTGUG00000012578) ELOVL4 (ENSTGUG00000020219) SH3BGRL2 (ENSTGUG00000027333) ENSTGUG00000025383 LCA5 (ENSTGUG00000012586) HMGN3 (ENSTGUG00000012589) PHIP (ENSTGUG00000012592) ##22 ENSTGUG00000029548 IRAK1BP1 (ENSTGUG00000012608) MEI4 (ENSTGUG00000028003) HTR1B (ENSTGUG00000012613) IMPG1 (ENSTGUG00000012614) MYO6 (ENSTGUG00000012619) SENP6 (ENSTGUG00000012629) FILIP1 (ENSTGUG00000012640) TMEM30A (ENSTGUG00000012644) COX7A2 (ENSTGUG00000012645) ENSTGUG00000019567 COL12A1 (ENSTGUG00000012648) CD109 (ENSTGUG00000012659) SLC17A5 (ENSTGUG00000018160) MTO1 (ENSTGUG00000012680) Common canary MODERN SPECIES 1 ME1 (ENSSCAG00000003640) RWDD2A (ENSSCAG00000003655) PGM3 (ENSSCAG00000003660) DOP1A (ENSSCAG00000003687) UBE3D (ENSSCAG00000003720) TPBG (ENSSCAG00000003736) IBTK (ENSSCAG00000003859) TENT5A (ENSSCAG00000004576) BCKDHB (ENSSCAG00000004595) ENSSCAG00000004602 TTK (ENSSCAG00000004607) ELOVL4 (ENSSCAG00000004633) SH3BGRL2 (ENSSCAG00000004643) LCA5 (ENSSCAG00000004652) HMGN3 (ENSSCAG00000004659) PHIP (ENSSCAG00000005084) ##22 IRAK1BP1 (ENSSCAG00000006329) MEI4 (ENSSCAG00000006359) HTR1B (ENSSCAG00000006372) IMPG1 (ENSSCAG00000006384) MYO6 (ENSSCAG00000006533) SENP6 (ENSSCAG00000007472) FILIP1 (ENSSCAG00000007503) TMEM30A (ENSSCAG00000007521) COX7A2 (ENSSCAG00000007533) COL12A1 (ENSSCAG00000007543) KCNQ5 (ENSSCAG00000007615) ENSSCAG00000007663 CGAS (ENSSCAG00000007683) MTO1 (ENSSCAG00000007689) EEF1A1 (ENSSCAG00000007693) Galloanserae ANCESTRAL SPECIES 2 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.d ENSGT00390000011297 Anatidae ANCESTRAL SPECIES ENSGT00950000183068.b ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.d ENSGT00390000011297 Pink-footed goose MODERN SPECIES 244 HMGN3 (ENSABRG00000013235) PHIP (ENSABRG00000013428) ##22 ENSABRG00000015790 IRAK1BP1 (ENSABRG00000015794) MEI4 (ENSABRG00000015802) HTR1B (ENSABRG00000015809) Duck MODERN SPECIES 21 PRSS35 (ENSAPLG00000027882) ME1 (ENSAPLG00000008240) PGM3 (ENSAPLG00000007722) DOP1A (ENSAPLG00000007126) UBE3D (ENSAPLG00000007088) TPBG (ENSAPLG00000024909) IBTK (ENSAPLG00000003222) TENT5A (ENSAPLG00000002202) BCKDHB (ENSAPLG00000006305) ENSAPLG00000029659 TTK (ENSAPLG00000006086) ELOVL4 (ENSAPLG00000005828) SH3BGRL2 (ENSAPLG00000025912) LCA5 (ENSAPLG00000003360) HMGN3 (ENSAPLG00000003473) PHIP (ENSAPLG00000003512) ##22 IRAK1BP1 (ENSAPLG00000004376) HTR1B (ENSAPLG00000001665) ENSAPLG00000019200 IMPG1 (ENSAPLG00000002413) MYO6 (ENSAPLG00000002456) SENP6 (ENSAPLG00000014331) FILIP1 (ENSAPLG00000014226) TMEM30A (ENSAPLG00000013903) COX7A2 (ENSAPLG00000013886) COL12A1 (ENSAPLG00000012959) CD109 (ENSAPLG00000007918) SLC17A5 (ENSAPLG00000008535) EEF1A1 (ENSAPLG00000009349) MTO1 (ENSAPLG00000009903) CGAS (ENSAPLG00000010154) Phasianidae ANCESTRAL SPECIES 3 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b.f ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C.b ENSGT00910000148442 ENSGT00940000154923.C.a ENSGT00940000155926 ENSGT00940000160370 Phasianidae_b ANCESTRAL SPECIES 2 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b.f ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C.a ENSGT00940000155926 ENSGT00940000160370 ENSGT00390000011297 ENSGT01050000244827.E Chicken MODERN SPECIES 22 PRSS35 (ENSGALG00010002965) ME1 (ENSGALG00010002972) RWDD2A (ENSGALG00010002995) PGM3 (ENSGALG00010003017) DOP1A (ENSGALG00010003081) UBE3D (ENSGALG00010003115) TPBG (ENSGALG00010003132) IBTK (ENSGALG00010003180) FAM46A (ENSGALG00010003202) BCKDHB (ENSGALG00010002431) TTK (ENSGALG00010002437) ELOVL4 (ENSGALG00010002456) SH3BGRL2 (ENSGALG00010002416) LCA5 (ENSGALG00010003778) HMGN2P46 (ENSGALG00010003810) PHIP (ENSGALG00010003819) ##22 ENSGALG00010003828 IRAK1BP1 (ENSGALG00010003831) MEI4 (ENSGALG00010003846) HTR1B (ENSGALG00010003863) IMPG1 (ENSGALG00010003935) MYO6 (ENSGALG00010003977) SENP6 (ENSGALG00010004038) FILIP1 (ENSGALG00010004055) TMEM30A (ENSGALG00010004058) COX7A2 (ENSGALG00010004076) COL12A1 (ENSGALG00010004096) CD109 (ENSGALG00010001508) SLC17A5 (ENSGALG00010001518) EEF1A1 (ENSGALG00010001525) ENSGALG00010001532 Turkey MODERN SPECIES 11 RWDD2A (ENSMGAG00000013738) PGM3 (ENSMGAG00000013744) DOP1A (ENSMGAG00000013741) UBE3D (ENSMGAG00000013746) ENSMGAG00000004511 ENSMGAG00000012356 TPBG (ENSMGAG00000013749) IBTK (ENSMGAG00000013748) TENT5A (ENSMGAG00000020615) BCKDHB (ENSMGAG00000013752) TTK (ENSMGAG00000013757) ELOVL4 (ENSMGAG00000013759) SH3BGRL2 (ENSMGAG00000013761) LCA5 (ENSMGAG00000020807) HMGN3 (ENSMGAG00000013762) PHIP (ENSMGAG00000017022) ##22 ENSMGAG00000022226 IRAK1BP1 (ENSMGAG00000013771) MEI4 (ENSMGAG00000013773) ENSMGAG00000022305 ENSMGAG00000020978 ENSMGAG00000013799 ENSMGAG00000013794 ENSMGAG00000020895 ENSMGAG00000013792 ENSMGAG00000022190 ENSMGAG00000020631 ENSMGAG00000013778 ENSMGAG00000013775 ENSMGAG00000020937 ENSMGAG00000011604 Japanese quail MODERN SPECIES 21 PRSS35 (ENSCJPG00005004304) ME1 (ENSCJPG00005004305) RWDD2A (ENSCJPG00005004306) PGM3 (ENSCJPG00005004307) DOP1A (ENSCJPG00005004309) UBE3D (ENSCJPG00005004320) TPBG (ENSCJPG00005004325) IBTK (ENSCJPG00005004327) TENT5A (ENSCJPG00005004348) BCKDHB (ENSCJPG00005004386) TTK (ENSCJPG00005004389) ELOVL4 (ENSCJPG00005004394) SH3BGRL2 (ENSCJPG00005004399) LCA5 (ENSCJPG00005004400) HMGN3 (ENSCJPG00005004401) PHIP (ENSCJPG00005004402) ##22 IRAK1BP1 (ENSCJPG00005005228) MEI4 (ENSCJPG00005005239) HTR1B (ENSCJPG00005005243) IMPG1 (ENSCJPG00005005250) MYO6 (ENSCJPG00005005255) SENP6 (ENSCJPG00005006979) FILIP1 (ENSCJPG00005006990) TMEM30A (ENSCJPG00005006994) COX7A2 (ENSCJPG00005006995) COL12A1 (ENSCJPG00005006996) CD109 (ENSCJPG00005007009) SLC17A5 (ENSCJPG00005007013) EEF1A1 (ENSCJPG00005007015) MTO1 (ENSCJPG00005007016) CGAS (ENSCJPG00005007017) African ostrich MODERN SPECIES 709 HMGN3 (ENSSCUG00000015868) PHIP (ENSSCUG00000016083) ##22 ENSSCUG00000016303 Australian saltwater crocodile MODERN SPECIES 38 PGM3 (ENSCPRG00005015960) DOP1A (ENSCPRG00005015948) UBE3D (ENSCPRG00005015935) ENSCPRG00005015930 IBTK (ENSCPRG00005015191) TENT5A (ENSCPRG00005014960) BCKDHB (ENSCPRG00005014905) ENSCPRG00005014888 ENSCPRG00005014883 TTK (ENSCPRG00005014873) ENSCPRG00005014866 ELOVL4 (ENSCPRG00005014862) SH3BGRL2 (ENSCPRG00005014843) LCA5 (ENSCPRG00005014836) HMGN3 (ENSCPRG00005014824) PHIP (ENSCPRG00005014443) ##22 IRAK1BP1 (ENSCPRG00005014294) ENSCPRG00005014290 MEI4 (ENSCPRG00005014282) HTR1B (ENSCPRG00005014275) IMPG1 (ENSCPRG00005014269) MYO6 (ENSCPRG00005013697) SENP6 (ENSCPRG00005013554) FILIP1 (ENSCPRG00005013542) TMEM30A (ENSCPRG00005013521) COX7A2 (ENSCPRG00005013509) COL12A1 (ENSCPRG00005013365) ENSCPRG00005013310 ENSCPRG00005013303 CD109 (ENSCPRG00005013290) SLC17A5 (ENSCPRG00005013278) Cryptodira ANCESTRAL SPECIES 1 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00950000186266 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a ENSGT00940000171801 Testudinoidea ANCESTRAL SPECIES 12 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00950000186266 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C.d ENSGT00940000154923.C.c ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a Emydidae ANCESTRAL SPECIES 8 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C.d ENSGT00940000154923.C.c ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a ENSGT00390000011297 painted turtle MODERN SPECIES 12 ME1 (ENSCPBG00000023019) RWDD2A (ENSCPBG00000023036) PGM3 (ENSCPBG00000023044) DOP1A (ENSCPBG00000023049) UBE3D (ENSCPBG00000023078) ENSCPBG00000023081 IBTK (ENSCPBG00000023084) TENT5A (ENSCPBG00000023089) BCKDHB (ENSCPBG00000023096) ENSCPBG00000023098 TTK (ENSCPBG00000023102) ELOVL4 (ENSCPBG00000023113) SH3BGRL2 (ENSCPBG00000023121) LCA5 (ENSCPBG00000023127) HMGN3 (ENSCPBG00000023133) PHIP (ENSCPBG00000023138) ##22 IRAK1BP1 (ENSCPBG00000023147) MEI4 (ENSCPBG00000023150) ENSCPBG00000023151 HTR1B (ENSCPBG00000023152) IMPG1 (ENSCPBG00000023153) MYO6 (ENSCPBG00000023190) SENP6 (ENSCPBG00000023929) FILIP1 (ENSCPBG00000023945) TMEM30A (ENSCPBG00000023947) COX7A2 (ENSCPBG00000023949) COL12A1 (ENSCPBG00000023951) CD109 (ENSCPBG00000023961) SLC17A5 (ENSCPBG00000023971) B3GAT2 (ENSCPBG00000023976) ENSCPBG00000023977 Three-toed box turtle MODERN SPECIES 15 ME1 (ENSTMTG00000012599) RWDD2A (ENSTMTG00000012619) PGM3 (ENSTMTG00000012629) DOP1A (ENSTMTG00000012668) UBE3D (ENSTMTG00000012729) TPBG (ENSTMTG00000012751) IBTK (ENSTMTG00000012807) TENT5A (ENSTMTG00000012963) BCKDHB (ENSTMTG00000012979) ENSTMTG00000013001 ENSTMTG00000013024 ELOVL4 (ENSTMTG00000013031) SH3BGRL2 (ENSTMTG00000013064) LCA5 (ENSTMTG00000013077) HMGN3 (ENSTMTG00000013116) PHIP (ENSTMTG00000013279) ##22 IRAK1BP1 (ENSTMTG00000014997) ENSTMTG00000015007 MEI4 (ENSTMTG00000015024) HTR1B (ENSTMTG00000015036) IMPG1 (ENSTMTG00000015053) MYO6 (ENSTMTG00000015125) SENP6 (ENSTMTG00000015245) FILIP1 (ENSTMTG00000015336) TMEM30A (ENSTMTG00000015350) COX7A2 (ENSTMTG00000015362) ENSTMTG00000015398 ENSTMTG00000015858 CD109 (ENSTMTG00000016013) SLC17A5 (ENSTMTG00000017932) ENSTMTG00000017955 Testudinidae ANCESTRAL SPECIES 10 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00950000186266 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C.d ENSGT00940000154923.C.c ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a Goode s thornscrub tortoise MODERN SPECIES 17 ENSGEVG00005000473 ENSGEVG00005000434 ENSGEVG00005000406 ENSGEVG00005000381 UBE3D (ENSGEVG00005000357) TPBG (ENSGEVG00005000326) IBTK (ENSGEVG00005000251) TENT5A (ENSGEVG00005000128) BCKDHB (ENSGEVG00005000090) ENSGEVG00005000054 TTK (ENSGEVG00005007385) ELOVL4 (ENSGEVG00005007353) SH3BGRL2 (ENSGEVG00005007341) LCA5 (ENSGEVG00005007269) HMGN3 (ENSGEVG00005007224) PHIP (ENSGEVG00005007162) ##22 ENSGEVG00005007140 IRAK1BP1 (ENSGEVG00005007115) MEI4 (ENSGEVG00005007086) HTR1B (ENSGEVG00005007063) IMPG1 (ENSGEVG00005006999) MYO6 (ENSGEVG00005006967) SENP6 (ENSGEVG00005006858) TMEM30A (ENSGEVG00005006797) COX7A2 (ENSGEVG00005006776) ENSGEVG00005006750 ENSGEVG00005006602 CD109 (ENSGEVG00005005778) SLC17A5 (ENSGEVG00005005504) ENSGEVG00005005454 MTO1 (ENSGEVG00005005432) Abingdon island giant tortoise MODERN SPECIES 1844 CXorf65 (ENSCABG00000006481) ENSCABG00000006485 MED12 (ENSCABG00000006491) NLGN3 (ENSCABG00000006510) GJB1 (ENSCABG00000006538) ENSCABG00000006546 ZMYM3 (ENSCABG00000006558) ENSCABG00000006564 ENSCABG00000006568 ENSCABG00000006570 ENSCABG00000006573 ENSCABG00000006575 ENSCABG00000006612 ENSCABG00000008466 PHIP (ENSCABG00000008476) ##22 IRAK1BP1 (ENSCABG00000008490) PAXBP1 (ENSCABG00000008492) SYNJ1 (ENSCABG00000008549) CFAP298 (ENSCABG00000009324) ENSCABG00000009361 ENSCABG00000009364 Mammalia ANCESTRAL SPECIES 2 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b Theria ANCESTRAL SPECIES 4 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b Marsupialia ANCESTRAL SPECIES 2 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT01050000244828.c.b.b.b.c.a.a.a.a.a.b.b ENSGT01050000244828.c.b.b.b.c.a.a.a.a.a.b.a ENSGT01090000260024.A.a.a.b.b.a ENSGT01050000244828.c.b.b.b.c.a.a.a.a.a.a ENSGT01050000244828.c.b.b.b.c.a.a.a.b ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT01050000244828.c.b.b.b.c.a.a.a.a.a.b.b ENSGT01050000244828.c.b.b.b.c.a.a.a.a.a.b.a ENSGT01090000260024.A.a.a.b.b.a ENSGT01050000244828.c.b.b.b.c.a.a.a.a.a.a ENSGT01050000244828.c.b.b.b.c.a.a.a.b ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a Diprotodontia ANCESTRAL SPECIES 15 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT01050000244828.c.b.b.b.c.a.a.a.a.a.b.b.a ENSGT01050000244828.c.b.b.b.c.a.a.a.a.a.b.a ENSGT01050000244828.c.b.b.b.c.a.a.a.a.a.a ENSGT01050000244828.c.b.b.b.c.a.a.a.b Diprotodontia_a ANCESTRAL SPECIES 23 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT01050000244828.c.b.b.b.c.a.a.a.a.a.b.b.a.a ENSGT01050000244828.c.b.b.b.c.a.a.a.a.a.b.b.a.b ENSGT01050000244828.c.b.b.b.c.a.a.a.a.a.b.a ENSGT01050000244828.c.b.b.b.c.a.a.a.a.a.a ENSGT01050000244828.c.b.b.b.c.a.a.a.b koala MODERN SPECIES 273 BCKDHB (ENSPCIG00000024729) TTK (ENSPCIG00000024723) ELOVL4 (ENSPCIG00000032765) SH3BGRL2 (ENSPCIG00000027296) LCA5 (ENSPCIG00000024716) HMGN3 (ENSPCIG00000024710) PHIP (ENSPCIG00000032385) ##22 ENSPCIG00000008716 IRAK1BP1 (ENSPCIG00000008715) ENSPCIG00000025850 ENSPCIG00000025852 ENSPCIG00000037125 ENSPCIG00000030916 ENSPCIG00000035368 ENSPCIG00000025855 ENSPCIG00000031132 ENSPCIG00000000185 ENSPCIG00000000097 Common wonbat MODERN SPECIES 36 ME1 (ENSVURG00010005337) RWDD2A (ENSVURG00010005311) PGM3 (ENSVURG00010005289) DOP1A (ENSVURG00010005218) UBE3D (ENSVURG00010005192) TPBG (ENSVURG00010005184) IBTK (ENSVURG00010004984) ENSVURG00010004939 TENT5A (ENSVURG00010004921) BCKDHB (ENSVURG00010004880) TTK (ENSVURG00010004795) ELOVL4 (ENSVURG00010004774) SH3BGRL2 (ENSVURG00010004737) LCA5 (ENSVURG00010004685) ENSVURG00010004643 PHIP (ENSVURG00010004597) ##22 ENSVURG00010004563 IRAK1BP1 (ENSVURG00010004556) ENSVURG00010004520 ENSVURG00010004503 ENSVURG00010004497 Wallaby MODERN SPECIES 5362 ENSMEUG00000002433 ##22 Tasmanian devil MODERN SPECIES 3 ME1 (ENSSHAG00000022508) RWDD2A (ENSSHAG00000025857) PGM3 (ENSSHAG00000016091) DOP1A (ENSSHAG00000015860) UBE3D (ENSSHAG00000015531) TPBG (ENSSHAG00000029876) IBTK (ENSSHAG00000011492) TENT5A (ENSSHAG00000022672) ENSSHAG00000027161 BCKDHB (ENSSHAG00000016067) ENSSHAG00000022834 TTK (ENSSHAG00000015661) ELOVL4 (ENSSHAG00000015338) ENSSHAG00000013428 HMGN3 (ENSSHAG00000011366) PHIP (ENSSHAG00000009200) ##22 ENSSHAG00000008819 ENSSHAG00000008549 ENSSHAG00000008076 ENSSHAG00000007653 ENSSHAG00000025978 ENSSHAG00000020671 ENSSHAG00000024927 ENSSHAG00000021141 ENSSHAG00000025910 ENSSHAG00000002475 ENSSHAG00000025459 ENSSHAG00000026589 ENSSHAG00000009668 HTR1B (ENSSHAG00000029598) ENSSHAG00000023915 Opossum MODERN SPECIES 1 ENSMODG00000046023 TPBG (ENSMODG00000018403) IBTK (ENSMODG00000018400) ENSMODG00000043613 ENSMODG00000046280 TENT5A (ENSMODG00000023444) ENSMODG00000023445 ENSMODG00000040086 ENSMODG00000018412 BCKDHB (ENSMODG00000018414) TTK (ENSMODG00000018418) ELOVL4 (ENSMODG00000018420) ENSMODG00000045326 ENSMODG00000028847 HMGN3 (ENSMODG00000018428) PHIP (ENSMODG00000018435) ##22 ENSMODG00000039004 ENSMODG00000018444 ENSMODG00000048980 ENSMODG00000018461 ENSMODG00000044618 ENSMODG00000041291 ENSMODG00000040687 ENSMODG00000018470 ENSMODG00000023466 ENSMODG00000018468 ENSMODG00000041047 ENSMODG00000037787 ENSMODG00000048473 ENSMODG00000041334 ENSMODG00000051195 Eutheria ANCESTRAL SPECIES 9 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00400000024746 Boreoeutheria ANCESTRAL SPECIES 7 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00400000024746 Euarchontoglires ANCESTRAL SPECIES 7 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00940000171801 Euarchontoglires_A ANCESTRAL SPECIES 6 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00940000171801 Glires ANCESTRAL SPECIES 5 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00940000162741.j Rodentia ANCESTRAL SPECIES 6 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00940000171801 Rodentia_A ANCESTRAL SPECIES 8 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00390000011297 Sciuridae ANCESTRAL SPECIES 1 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00390000011297 Marmotini ANCESTRAL SPECIES 11 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.bb.b ENSGT00940000154923.C ENSGT00910000148442 Marmotini_b ANCESTRAL SPECIES 100 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b Arctic ground squirrel MODERN SPECIES 15 ME1 (ENSUPAG00010016253) RWDD2A (ENSUPAG00010016239) PGM3 (ENSUPAG00010016209) DOP1A (ENSUPAG00010016125) UBE3D (ENSUPAG00010016099) TPBG (ENSUPAG00010016090) IBTK (ENSUPAG00010016056) TENT5A (ENSUPAG00010016048) ENSUPAG00010016034 BCKDHB (ENSUPAG00010015993) TTK (ENSUPAG00010015942) ELOVL4 (ENSUPAG00010015937) SH3BGRL2 (ENSUPAG00010015931) LCA5 (ENSUPAG00010015912) HMGN3 (ENSUPAG00010015838) PHIP (ENSUPAG00010015746) ##22 IRAK1BP1 (ENSUPAG00010015734) MEI4 (ENSUPAG00010015722) HTR1B (ENSUPAG00010015717) Squirrel MODERN SPECIES 110 PRSS35 (ENSSTOG00000022635) ME1 (ENSSTOG00000001289) RWDD2A (ENSSTOG00000001288) PGM3 (ENSSTOG00000001276) DOP1A (ENSSTOG00000001254) UBE3D (ENSSTOG00000003456) TPBG (ENSSTOG00000000142) IBTK (ENSSTOG00000003834) TENT5A (ENSSTOG00000027772) BCKDHB (ENSSTOG00000014770) ENSSTOG00000006164 ELOVL4 (ENSSTOG00000029122) SH3BGRL2 (ENSSTOG00000024872) LCA5 (ENSSTOG00000013343) HMGN3 (ENSSTOG00000014353) PHIP (ENSSTOG00000019912) ##22 IRAK1BP1 (ENSSTOG00000029168) MEI4 (ENSSTOG00000033977) Alpin marmot MODERN SPECIES 124 LCA5 (ENSMMMG00000019215) HMGN3 (ENSMMMG00000019226) PHIP (ENSMMMG00000019252) ##22 IRAK1BP1 (ENSMMMG00000019278) ENSMMMG00000019291 MEI4 (ENSMMMG00000019296) ENSMMMG00000019303 Eurasian red squirrel MODERN SPECIES 16 DOP1A (ENSSVLG00005005866) UBE3D (ENSSVLG00005005911) ENSSVLG00005005937 TPBG (ENSSVLG00005005982) IBTK (ENSSVLG00005006031) ENSSVLG00005006118 TENT5A (ENSSVLG00005006145) ENSSVLG00005006230 ENSSVLG00005006265 BCKDHB (ENSSVLG00005006295) TTK (ENSSVLG00005006338) ELOVL4 (ENSSVLG00005006524) SH3BGRL2 (ENSSVLG00005006564) LCA5 (ENSSVLG00005006608) HMGN3 (ENSSVLG00005006702) PHIP (ENSSVLG00005006782) ##22 IRAK1BP1 (ENSSVLG00005006952) ENSSVLG00005006976 MEI4 (ENSSVLG00005006998) ENSSVLG00005007055 HTR1B (ENSSVLG00005007066) ENSSVLG00005007097 ENSSVLG00005007111 ENSSVLG00005007127 IMPG1 (ENSSVLG00005007176) ENSSVLG00005007304 MYO6 (ENSSVLG00005007369) ENSSVLG00005007494 ENSSVLG00005007543 FILIP1 (ENSSVLG00005007573) TMEM30A (ENSSVLG00005007677) Hystricomorpha ANCESTRAL SPECIES 39 ENSGT00940000157935 ENSGT00940000157565 ENSGT00390000009155 ENSGT00940000155884 ENSGT00940000159583 ENSGT00390000018730.B ENSGT00940000155134 ENSGT00940000155933.b.a ENSGT00940000154550.a.f ENSGT00390000004660.C.a.a.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 14 FAM135A (ENSHGLG00000001394) SDHAF4 (ENSHGLG00000034617) SMAP1 (ENSHGLG00000003525) B3GAT2 (ENSHGLG00000003085) OGFRL1 (ENSHGLG00000033923) ENSHGLG00000037204 ENSHGLG00000002519 ENSHGLG00000001668 TMEM30A (ENSHGLG00000001707) ENSHGLG00000045117 ENSHGLG00000048446 ELOVL4 (ENSHGLG00000001230) SH3BGRL2 (ENSHGLG00000002351) LCA5 (ENSHGLG00000043561) ENSHGLG00000001693 ENSHGLG00000001086 ##22 ENSHGLG00000002796 ENSHGLG00000035419 ENSHGLG00000040574 ENSHGLG00000002589 HTR1B (ENSHGLG00000045742) ENSHGLG00000047637 IMPG1 (ENSHGLG00000009293) ENSHGLG00000037125 MYO6 (ENSHGLG00000002338) SENP6 (ENSHGLG00000001854) ENSHGLG00000041434 ENSHGLG00000032414 ENSHGLG00000019916 FILIP1 (ENSHGLG00000001478) ENSHGLG00000044901 Naked mole-rat female MODERN SPECIES 6 ENSHGLG00000037773 ENSHGLG00000048197 ENSHGLG00000009195 MATN4 (ENSHGLG00000008405) RBPJL (ENSHGLG00000018495) SDC4 (ENSHGLG00000035110) ENSHGLG00000039211 SYS1 (ENSHGLG00000049939) DBNDD2 (ENSHGLG00000015151) ENSHGLG00000046814 ENSHGLG00000009120 ENSHGLG00000037304 ENSHGLG00000048746 WFDC2 (ENSHGLG00000008108) ENSHGLG00000007778 ENSHGLG00000033998 ##22 EPPIN (ENSHGLG00000043093) WFDC8 (ENSHGLG00000007455) WFDC9 (ENSHGLG00000006793) SPINT4 (ENSHGLG00000006057) ENSHGLG00000005726 ENSHGLG00000039207 DNTTIP1 (ENSHGLG00000005000) UBE2C (ENSHGLG00000004811) TNNC2 (ENSHGLG00000047677) SNX21 (ENSHGLG00000017049) ACOT8 (ENSHGLG00000011034) ZSWIM3 (ENSHGLG00000010597) ZSWIM1 (ENSHGLG00000010261) SPATA25 (ENSHGLG00000009174) NEURL2 (ENSHGLG00000008837) Hystricomorpha_a ANCESTRAL SPECIES 78 ENSGT00940000157935 ENSGT00940000157565 ENSGT00390000009155 ENSGT00940000155884 ENSGT00940000159583 ENSGT00390000018730.B ENSGT00940000155134 ENSGT00940000155933.b.a ENSGT00940000154550.a.f ENSGT00390000004660.C.a.a.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a Guinea pig MODERN SPECIES 4 COL19A1 (ENSCPOG00000032293) COL9A1 (ENSCPOG00000005651) FAM135A (ENSCPOG00000007057) SDHAF4 (ENSCPOG00000007065) SMAP1 (ENSCPOG00000014957) ENSCPOG00000040107 ENSCPOG00000030138 ENSCPOG00000031167 KCNQ5 (ENSCPOG00000000120) ENSCPOG00000035296 ENSCPOG00000036238 ELOVL4 (ENSCPOG00000006067) SH3BGRL2 (ENSCPOG00000036088) LCA5 (ENSCPOG00000005542) HMGN3 (ENSCPOG00000012407) PHIP (ENSCPOG00000006709) ##22 ENSCPOG00000026381 MEI4 (ENSCPOG00000022878) HTR1B (ENSCPOG00000000103) IMPG1 (ENSCPOG00000007022) MYO6 (ENSCPOG00000007009) SENP6 (ENSCPOG00000033810) FILIP1 (ENSCPOG00000012736) ENSCPOG00000030167 COX7A2 (ENSCPOG00000040353) COL12A1 (ENSCPOG00000014388) CD109 (ENSCPOG00000007568) SLC17A5 (ENSCPOG00000004069) ENSCPOG00000004067 MTO1 (ENSCPOG00000013100) ENSCPOG00000010595 Hystricomorpha_b ANCESTRAL SPECIES 103 ENSGT00940000158276 ENSGT00940000157935 ENSGT00940000157565 ENSGT00390000009155 ENSGT00940000155884 ENSGT00940000159583 ENSGT00390000018730.B ENSGT00940000155134 ENSGT00940000155933.b.a ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00940000164915 ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a.b ENSGT00940000154550.a.f Degu MODERN SPECIES 102 B3GAT2 (ENSODEG00000004838) ENSODEG00000004821 ENSODEG00000019070 ENSODEG00000004801 ENSODEG00000004685 KCNQ5 (ENSODEG00000004476) ENSODEG00000004648 ENSODEG00000019046 ENSODEG00000004627 ELOVL4 (ENSODEG00000004597) ENSODEG00000004582 ENSODEG00000004441 ENSODEG00000019022 LCA5 (ENSODEG00000004406) ENSODEG00000004261 ENSODEG00000004247 ##22 IRAK1BP1 (ENSODEG00000004218) ENSODEG00000004202 MEI4 (ENSODEG00000004184) HTR1B (ENSODEG00000004895) ENSODEG00000019128 IMPG1 (ENSODEG00000004752) MYO6 (ENSODEG00000004585) SENP6 (ENSODEG00000004215) FILIP1 (ENSODEG00000004023) ENSODEG00000003951 ENSODEG00000003926 ENSODEG00000019052 ENSODEG00000004437 ENSODEG00000004423 ENSODEG00000004414 Long-tailed chinchilla MODERN SPECIES 209 ENSCLAG00000001161 ELOVL4 (ENSCLAG00000000939) SH3BGRL2 (ENSCLAG00000000842) LCA5 (ENSCLAG00000002326) ENSCLAG00000017462 HMGN3 (ENSCLAG00000001928) PHIP (ENSCLAG00000001369) ##22 IRAK1BP1 (ENSCLAG00000004073) MEI4 (ENSCLAG00000003794) HTR1B (ENSCLAG00000017665) IMPG1 (ENSCLAG00000001606) MYO6 (ENSCLAG00000001561) SENP6 (ENSCLAG00000002196) ENSCLAG00000001980 FILIP1 (ENSCLAG00000000668) ENSCLAG00000000466 COX7A2 (ENSCLAG00000000425) DST (ENSCLAG00000001478) BEND6 (ENSCLAG00000001119) ENSCLAG00000000987 ZNF451 (ENSCLAG00000000819) ENSCLAG00000000781 Rodentia_B ANCESTRAL SPECIES 18 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00940000171801 Myomorpha ANCESTRAL SPECIES 25 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00940000171801 Muroidea ANCESTRAL SPECIES 23 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00940000171801 Muroidea_A ANCESTRAL SPECIES 6 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00940000171801 Cricetidae ANCESTRAL SPECIES 4 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00390000011297 ENSGT01100000263980 Cricetidae_B ANCESTRAL SPECIES 24 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00390000011297 ENSGT01100000263980 Prairie vole MODERN SPECIES 13 Pgm3 (ENSMOCG00000021424) Dop1a (ENSMOCG00000007001) Ube2cbp (ENSMOCG00000022486) Tpbg (ENSMOCG00000007113) Ibtk (ENSMOCG00000020340) Tent5a (ENSMOCG00000018533) Bckdhb (ENSMOCG00000019888) Ttk (ENSMOCG00000012815) ENSMOCG00000013928 Elovl4 (ENSMOCG00000018869) Sh3bgrl2 (ENSMOCG00000009547) ENSMOCG00000012285 Hmgn3 (ENSMOCG00000003426) ENSMOCG00000015871 ENSMOCG00000002829 Phip (ENSMOCG00000002398) ##22 Irak1bp1 (ENSMOCG00000013631) Mei4 (ENSMOCG00000010881) ENSMOCG00000013276 Htr1b (ENSMOCG00000007114) Impg1 (ENSMOCG00000006169) Myo6 (ENSMOCG00000005996) Senp6 (ENSMOCG00000002123) Filip1 (ENSMOCG00000001866) Tmem30a (ENSMOCG00000018992) ENSMOCG00000010157 Col12a1 (ENSMOCG00000003044) Cd109 (ENSMOCG00000004552) Slc17a5 (ENSMOCG00000019625) Eef1a1 (ENSMOCG00000009629) Mto1 (ENSMOCG00000018371) Northern American deer mouse MODERN SPECIES 20 Me1 (ENSPEMG00000013833) Rwdd2a (ENSPEMG00000000162) Pgm3 (ENSPEMG00000020344) Dop1a (ENSPEMG00000020362) Ube2cbp (ENSPEMG00000021166) Tpbg (ENSPEMG00000030416) Ibtk (ENSPEMG00000024181) Tent5a (ENSPEMG00000028314) Bckdhb (ENSPEMG00000013178) Ttk (ENSPEMG00000020411) Elovl4 (ENSPEMG00000021160) Sh3bgrl2 (ENSPEMG00000024667) Lca5 (ENSPEMG00000020338) Hmgn3 (ENSPEMG00000030564) ENSPEMG00000009674 Phip (ENSPEMG00000026362) ##22 Irak1bp1 (ENSPEMG00000022100) Mei4 (ENSPEMG00000030383) Htr1b (ENSPEMG00000027052) Impg1 (ENSPEMG00000020924) Myo6 (ENSPEMG00000021427) Senp6 (ENSPEMG00000022303) Filip1 (ENSPEMG00000021321) Tmem30a (ENSPEMG00000020940) ENSPEMG00000022304 Col12a1 (ENSPEMG00000023006) ENSPEMG00000025784 ENSPEMG00000019322 Cd109 (ENSPEMG00000023373) Slc17a5 (ENSPEMG00000022441) Eef1a1 (ENSPEMG00000024174) Cricetinae ANCESTRAL SPECIES 6 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00390000011297 ENSGT01100000263980 Chinese hamster chok1gshd MODERN SPECIES 284 Rwdd2a (ENSCGRG00001024898) Pgm3 (ENSCGRG00001024995) Dop1a (ENSCGRG00001025036) Ube2cbp (ENSCGRG00001021549) ENSCGRG00001022386 Tpbg (ENSCGRG00001001413) Ibtk (ENSCGRG00001007460) Tent5a (ENSCGRG00001015453) Bckdhb (ENSCGRG00001017976) Ttk (ENSCGRG00001015565) ELOVL4 (ENSCGRG00001020278) Sh3bgrl2 (ENSCGRG00001021661) ENSCGRG00001010964 Lca5 (ENSCGRG00001023378) Hmgn3 (ENSCGRG00001019763) Phip (ENSCGRG00001003114) ##22 Irak1bp1 (ENSCGRG00001021968) Mei4 (ENSCGRG00001016059) Htr1b (ENSCGRG00001012010) ENSCGRG00001011114 ENSCGRG00001004664 Impg1 (ENSCGRG00001012701) Myo6 (ENSCGRG00001024878) Senp6 (ENSCGRG00001014659) ENSCGRG00001001212 Filip1 (ENSCGRG00001013402) Tmem30a (ENSCGRG00001015376) ENSCGRG00001017831 Col12a1 (ENSCGRG00001000858) Cd109 (ENSCGRG00001017958) Slc17a5 (ENSCGRG00001023838) Golden Hamster MODERN SPECIES 658 Pgm3 (ENSMAUG00000000748) ENSMAUG00000017949 ENSMAUG00000007022 Ube2cbp (ENSMAUG00000010527) ENSMAUG00000002018 Tpbg (ENSMAUG00000020972) Ibtk (ENSMAUG00000009881) Tent5a (ENSMAUG00000021077) Bckdhb (ENSMAUG00000004890) ENSMAUG00000021357 ENSMAUG00000005925 Elovl4 (ENSMAUG00000011373) Sh3bgrl2 (ENSMAUG00000003394) ENSMAUG00000008379 Hmgn3 (ENSMAUG00000021518) Phip (ENSMAUG00000007204) ##22 Irak1bp1 (ENSMAUG00000012484) Mei4 (ENSMAUG00000016599) Htr1b (ENSMAUG00000006620) ENSMAUG00000000782 Impg1 (ENSMAUG00000001564) Myo6 (ENSMAUG00000005286) Senp6 (ENSMAUG00000012039) Filip1 (ENSMAUG00000017069) Tmem30a (ENSMAUG00000019655) Cox7a2 (ENSMAUG00000008392) Col12a1 (ENSMAUG00000013245) ENSMAUG00000008464 ENSMAUG00000009878 Cd109 (ENSMAUG00000019038) Slc17a5 (ENSMAUG00000017608) Murinae ANCESTRAL SPECIES 3 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00940000171801 Mus ANCESTRAL SPECIES 4 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00390000011297 Mus_A ANCESTRAL SPECIES 4 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00390000011297 Mus_B ANCESTRAL SPECIES 3 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00390000011297 Mus_C ANCESTRAL SPECIES 8 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00390000011297 ENSGT01100000263980 Steppe mouse MODERN SPECIES 3117 ENSMSIG00000021012 Bckdhb (ENSMSIG00000020949) Ttk (ENSMSIG00000020879) Elovl4 (ENSMSIG00000020869) Sh3bgrl2 (ENSMSIG00000020824) Hmgn3 (ENSMSIG00000020701) Phip (ENSMSIG00000020676) ##22 Irak1bp1 (ENSMSIG00000020638) spretus MODERN SPECIES 18 Prss35 (MGP_SPRETEiJ_G0033638) Me1 (MGP_SPRETEiJ_G0033637) Rwdd2a (MGP_SPRETEiJ_G0033636) Pgm3 (MGP_SPRETEiJ_G0033635) Dop1a (MGP_SPRETEiJ_G0033634) Ube2cbp (MGP_SPRETEiJ_G0033633) Tpbg (MGP_SPRETEiJ_G0033632) Ibtk (MGP_SPRETEiJ_G0033631) Tent5a (MGP_SPRETEiJ_G0033630) Bckdhb (MGP_SPRETEiJ_G0033629) Ttk (MGP_SPRETEiJ_G0033628) Elovl4 (MGP_SPRETEiJ_G0033627) Sh3bgrl2 (MGP_SPRETEiJ_G0033626) Lca5 (MGP_SPRETEiJ_G0033625) Hmgn3 (MGP_SPRETEiJ_G0033624) Phip (MGP_SPRETEiJ_G0033623) ##22 Irak1bp1 (MGP_SPRETEiJ_G0033622) Mei4 (MGP_SPRETEiJ_G0033621) Htr1b (MGP_SPRETEiJ_G0033620) Impg1 (MGP_SPRETEiJ_G0033619) Myo6 (MGP_SPRETEiJ_G0033618) Senp6 (MGP_SPRETEiJ_G0033617) Filip1 (MGP_SPRETEiJ_G0033616) Tmem30a (MGP_SPRETEiJ_G0033615) Cox7a2 (MGP_SPRETEiJ_G0033614) Col12a1 (MGP_SPRETEiJ_G0033613) Cd109 (MGP_SPRETEiJ_G0033612) Slc17a5 (MGP_SPRETEiJ_G0033611) Mto1 (MGP_SPRETEiJ_G0033610) MGP_SPRETEiJ_G0033609 Cgas (MGP_SPRETEiJ_G0033608) Mouse MODERN SPECIES 18 Prss35 (ENSMUSG00000033491) Me1 (ENSMUSG00000032418) Rwdd2a (ENSMUSG00000032417) Pgm3 (ENSMUSG00000056131) Dop1a (ENSMUSG00000034973) Ube2cbp (ENSMUSG00000032415) Tpbg (ENSMUSG00000035274) Ibtk (ENSMUSG00000035941) Tent5a (ENSMUSG00000032265) Bckdhb (ENSMUSG00000032263) Ttk (ENSMUSG00000038379) Elovl4 (ENSMUSG00000032262) Sh3bgrl2 (ENSMUSG00000032261) Lca5 (ENSMUSG00000032258) Hmgn3 (ENSMUSG00000066456) Phip (ENSMUSG00000032253) ##22 Irak1bp1 (ENSMUSG00000032251) Mei4 (ENSMUSG00000043289) Htr1b (ENSMUSG00000049511) Impg1 (ENSMUSG00000032343) Myo6 (ENSMUSG00000033577) Senp6 (ENSMUSG00000034252) Filip1 (ENSMUSG00000034898) Tmem30a (ENSMUSG00000032328) Cox7a2 (ENSMUSG00000032330) Col12a1 (ENSMUSG00000032332) Cd109 (ENSMUSG00000046186) Slc17a5 (ENSMUSG00000049624) Eef1a1 (ENSMUSG00000037742) Mto1 (ENSMUSG00000032342) Cgas (ENSMUSG00000032344) Ryukyu mouse MODERN SPECIES 18 Prss35 (MGP_CAROLIEiJ_G0032499) MGP_CAROLIEiJ_G0032498 Rwdd2a (MGP_CAROLIEiJ_G0032497) MGP_CAROLIEiJ_G0032496 Dop1a (MGP_CAROLIEiJ_G0032495) Ube2cbp (MGP_CAROLIEiJ_G0032494) Tpbg (MGP_CAROLIEiJ_G0032493) Ibtk (MGP_CAROLIEiJ_G0032492) Tent5a (MGP_CAROLIEiJ_G0032491) MGP_CAROLIEiJ_G0032490 Ttk (MGP_CAROLIEiJ_G0032489) Elovl4 (MGP_CAROLIEiJ_G0032488) Sh3bgrl2 (MGP_CAROLIEiJ_G0032487) Lca5 (MGP_CAROLIEiJ_G0032486) Hmgn3 (MGP_CAROLIEiJ_G0032485) Phip (MGP_CAROLIEiJ_G0032484) ##22 Irak1bp1 (MGP_CAROLIEiJ_G0032483) Mei4 (MGP_CAROLIEiJ_G0032482) Htr1b (MGP_CAROLIEiJ_G0032481) Impg1 (MGP_CAROLIEiJ_G0032479) Myo6 (MGP_CAROLIEiJ_G0032478) Senp6 (MGP_CAROLIEiJ_G0032477) Filip1 (MGP_CAROLIEiJ_G0032476) Tmem30a (MGP_CAROLIEiJ_G0032475) Cox7a2 (MGP_CAROLIEiJ_G0032474) Col12a1 (MGP_CAROLIEiJ_G0032473) Cd109 (MGP_CAROLIEiJ_G0032472) Slc17a5 (MGP_CAROLIEiJ_G0032471) Mto1 (MGP_CAROLIEiJ_G0032470) MGP_CAROLIEiJ_G0032469 Cgas (MGP_CAROLIEiJ_G0032468) Shrew mouse MODERN SPECIES 1 Me1 (MGP_PahariEiJ_G0015365) Rwdd2a (MGP_PahariEiJ_G0015364) Pgm3 (MGP_PahariEiJ_G0015363) Dop1a (MGP_PahariEiJ_G0015362) Ube2cbp (MGP_PahariEiJ_G0015361) Tpbg (MGP_PahariEiJ_G0015360) Ibtk (MGP_PahariEiJ_G0015359) Tent5a (MGP_PahariEiJ_G0015358) Bckdhb (MGP_PahariEiJ_G0015357) Ttk (MGP_PahariEiJ_G0015356) Elovl4 (MGP_PahariEiJ_G0015355) MGP_PahariEiJ_G0015354 Sh3bgrl2 (MGP_PahariEiJ_G0015353) Lca5 (MGP_PahariEiJ_G0015352) Hmgn3 (MGP_PahariEiJ_G0015351) Phip (MGP_PahariEiJ_G0015350) ##22 Irak1bp1 (MGP_PahariEiJ_G0015349) Mei4 (MGP_PahariEiJ_G0015348) Htr1b (MGP_PahariEiJ_G0015347) Impg1 (MGP_PahariEiJ_G0015346) Myo6 (MGP_PahariEiJ_G0015345) Senp6 (MGP_PahariEiJ_G0015344) Filip1 (MGP_PahariEiJ_G0015343) Tmem30a (MGP_PahariEiJ_G0015342) Cox7a2 (MGP_PahariEiJ_G0015341) Col12a1 (MGP_PahariEiJ_G0015340) Cd109 (MGP_PahariEiJ_G0015339) Slc17a5 (MGP_PahariEiJ_G0015338) Eef1a1 (MGP_PahariEiJ_G0015337) Mto1 (MGP_PahariEiJ_G0015336) MGP_PahariEiJ_G0015335 Rat MODERN SPECIES 18 Dop1a (ENSRNOG00000022847) Ube3d (ENSRNOG00000010802) Tpbg (ENSRNOG00000010694) LOC100359563 (ENSRNOG00000029843) Ibtk (ENSRNOG00000027728) Tent5a (ENSRNOG00000010240) RGD1560917 (ENSRNOG00000034128) Bckdhb (ENSRNOG00000009928) Ttk (ENSRNOG00000029055) Elovl4 (ENSRNOG00000009773) ENSRNOG00000066197 Sh3bgrl2 (ENSRNOG00000068670) Sh3bgrl2 (ENSRNOG00000009613) Lca5 (ENSRNOG00000009580) Hmgn3 (ENSRNOG00000031032) Phip (ENSRNOG00000008652) ##22 Irak1bp1 (ENSRNOG00000008984) Mei4 (ENSRNOG00000023794) Htr1b (ENSRNOG00000013042) Impg1 (ENSRNOG00000012479) Myo6 (ENSRNOG00000011852) Senp6 (ENSRNOG00000024336) Filip1 (ENSRNOG00000011521) Tmem30a (ENSRNOG00000010895) ENSRNOG00000010657 Cox7a2 (ENSRNOG00000042903) LOC103690438 (ENSRNOG00000062056) Col12a1 (ENSRNOG00000058470) LOC100363141 (ENSRNOG00000063215) LOC100363141 (ENSRNOG00000056662) ENSRNOG00000031132 Upper Galilee mountains blind mole rat MODERN SPECIES 548 Ttk (ENSNGAG00000008755) Elovl4 (ENSNGAG00000023504) Sh3bgrl2 (ENSNGAG00000023793) ENSNGAG00000012296 Hmgn3 (ENSNGAG00000021471) Phip (ENSNGAG00000022482) ##22 Lesser Egyptian jerboa MODERN SPECIES 76 Rwdd2a (ENSJJAG00000023192) Pgm3 (ENSJJAG00000014123) Dop1a (ENSJJAG00000014556) Ube2cbp (ENSJJAG00000010180) Tpbg (ENSJJAG00000008383) Ibtk (ENSJJAG00000018128) Tent5a (ENSJJAG00000023080) ENSJJAG00000013053 ENSJJAG00000010193 Bckdhb (ENSJJAG00000004571) ENSJJAG00000016910 Elovl4 (ENSJJAG00000009951) Sh3bgrl2 (ENSJJAG00000023888) ENSJJAG00000000738 Hmgn3 (ENSJJAG00000019940) ENSJJAG00000005154 ##22 ENSJJAG00000007166 Irak1bp1 (ENSJJAG00000021600) ENSJJAG00000014817 ENSJJAG00000005450 Mei4 (ENSJJAG00000018138) Htr1b (ENSJJAG00000018451) ENSJJAG00000013199 ENSJJAG00000006614 Impg1 (ENSJJAG00000022816) Myo6 (ENSJJAG00000021392) Senp6 (ENSJJAG00000022873) ENSJJAG00000008502 Filip1 (ENSJJAG00000014437) Tmem30a (ENSJJAG00000015851) Cox7a2 (ENSJJAG00000019442) Kangaroo rat MODERN SPECIES 500 Hmgn3 (ENSDORG00000012112) Phip (ENSDORG00000012738) ##22 Irak1bp1 (ENSDORG00000024102) ENSDORG00000024501 ENSDORG00000028872 Mei4 (ENSDORG00000001690) Htr1b (ENSDORG00000001316) ENSDORG00000004225 Myo6 (ENSDORG00000004222) Senp6 (ENSDORG00000011733) Filip1 (ENSDORG00000006350) Tmem30a (ENSDORG00000015416) ENSDORG00000015425 Col12a1 (ENSDORG00000010155) Lagomorpha ANCESTRAL SPECIES 2 ENSGT00950000183068.b ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00970000198265 ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.a ENSGT00390000011297 ENSGT01100000263980 Rabbit MODERN SPECIES 3 PGM3 (ENSOCUG00000010803) DOP1A (ENSOCUG00000010777) UBE3D (ENSOCUG00000021110) ENSOCUG00000025704 IBTK (ENSOCUG00000002154) TENT5A (ENSOCUG00000008796) BCKDHB (ENSOCUG00000013139) ENSOCUG00000030998 TTK (ENSOCUG00000007124) ENSOCUG00000030997 ELOVL4 (ENSOCUG00000005334) ENSOCUG00000036258 SH3BGRL2 (ENSOCUG00000006756) LCA5 (ENSOCUG00000006007) HMGN3 (ENSOCUG00000003399) PHIP (ENSOCUG00000016401) ##22 IRAK1BP1 (ENSOCUG00000001488) MEI4 (ENSOCUG00000031651) ENSOCUG00000036891 ENSOCUG00000022881 HTR1B (ENSOCUG00000009271) ENSOCUG00000024129 IMPG1 (ENSOCUG00000001484) MYO6 (ENSOCUG00000024606) SENP6 (ENSOCUG00000010714) FILIP1 (ENSOCUG00000012854) TMEM30A (ENSOCUG00000030135) ENSOCUG00000035102 COL12A1 (ENSOCUG00000015320) ENSOCUG00000029583 CD109 (ENSOCUG00000006444) Pika MODERN SPECIES 1976 ENSOPRG00000000348 ##22 Tree shrew MODERN SPECIES 2285 LCA5 (ENSTBEG00000015638) HMGN3 (ENSTBEG00000015468) PHIP (ENSTBEG00000014351) ##22 ENSTBEG00000014282 Primates ANCESTRAL SPECIES 5 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00390000011297 Haplorrhini ANCESTRAL SPECIES 2 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00390000011297 Simiiformes ANCESTRAL SPECIES 5 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00390000011297 Catarrhini ANCESTRAL SPECIES 5 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT00940000153112.D.n.a.a.a.a.a.a.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00940000154846.b.k.b ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00390000011297 Hominoidea ANCESTRAL SPECIES 4 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT00940000153112.D.n.a.a.a.a.a.a.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00940000154846.b.k.b ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.g ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00390000011297 Hominidae ANCESTRAL SPECIES 5 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT00940000153112.D.n.a.a.a.a.a.a.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00940000154846.b.k.b ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.g ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.a ENSGT00390000011297 Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00550000076405 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT00940000153112.D.n.a.a.a.a.a.a.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00940000154846.b.k.b ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.g ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.a ENSGT00390000011297 ENSGT00970000198019 Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00550000076405 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT00940000153112.D.n.a.a.a.a.a.a.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00940000154846.b.k.b ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.g ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.a ENSGT00390000011297 ENSGT01050000244827.E Pan ANCESTRAL SPECIES 5 ENSGT00940000156277 ENSGT00940000157191 ENSGT00550000076405 ENSGT00940000156533.b ENSGT00940000155406.f ENSGT00900000143744 ENSGT00950000182984.a ENSGT00910000147771 ENSGT00940000153112.D.n.a.a.a.a.a.a.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00940000154846.b.k.b ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.g ENSGT00940000154923.C ENSGT00940000163686.b.a.b ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.a ENSGT00390000011297 Chimpanzee MODERN SPECIES 19 IBTK (ENSPTRG00000018375) TENT5A (ENSPTRG00000047338) ENSPTRG00000046353 BCKDHB (ENSPTRG00000018372) ENSPTRG00000048236 ENSPTRG00000050076 ENSPTRG00000044375 TTK (ENSPTRG00000018371) ENSPTRG00000050523 ELOVL4 (ENSPTRG00000043548) SH3BGRL2 (ENSPTRG00000050701) LCA5 (ENSPTRG00000018367) ENSPTRG00000046338 HMGN3 (ENSPTRG00000018366) ENSPTRG00000044309 PHIP (ENSPTRG00000018365) ##22 IRAK1BP1 (ENSPTRG00000018363) MEI4 (ENSPTRG00000044078) HTR1B (ENSPTRG00000018361) IMPG1 (ENSPTRG00000018360) MYO6 (ENSPTRG00000023525) SENP6 (ENSPTRG00000018357) FILIP1 (ENSPTRG00000018356) TMEM30A (ENSPTRG00000018355) COX7A2 (ENSPTRG00000050864) COL12A1 (ENSPTRG00000018351) ENSPTRG00000052684 CD109 (ENSPTRG00000018349) SLC17A5 (ENSPTRG00000018348) EEF1A1 (ENSPTRG00000018347) MTO1 (ENSPTRG00000048593) Bonobo MODERN SPECIES 19 TPBG (ENSPPAG00000000668) IBTK (ENSPPAG00000024961) TENT5A (ENSPPAG00000028235) ENSPPAG00000022881 BCKDHB (ENSPPAG00000042672) ENSPPAG00000032065 ENSPPAG00000035439 TTK (ENSPPAG00000042970) ENSPPAG00000040295 ELOVL4 (ENSPPAG00000041207) SH3BGRL2 (ENSPPAG00000037930) LCA5 (ENSPPAG00000022297) ENSPPAG00000040335 ENSPPAG00000041998 ENSPPAG00000031854 PHIP (ENSPPAG00000028075) ##22 IRAK1BP1 (ENSPPAG00000034306) MEI4 (ENSPPAG00000018545) HTR1B (ENSPPAG00000014828) IMPG1 (ENSPPAG00000029771) MYO6 (ENSPPAG00000038487) SENP6 (ENSPPAG00000030083) FILIP1 (ENSPPAG00000032598) TMEM30A (ENSPPAG00000028442) ENSPPAG00000005585 COL12A1 (ENSPPAG00000044050) ENSPPAG00000043602 CD109 (ENSPPAG00000029267) SLC17A5 (ENSPPAG00000026527) EEF1A1 (ENSPPAG00000038736) MTO1 (ENSPPAG00000028710) Human MODERN SPECIES 18 PRSS35 (ENSG00000146250) ME1 (ENSG00000065833) RWDD2A (ENSG00000013392) PGM3 (ENSG00000013375) DOP1A (ENSG00000083097) UBE3D (ENSG00000118420) TPBG (ENSG00000146242) IBTK (ENSG00000005700) TENT5A (ENSG00000112773) BCKDHB (ENSG00000083123) TTK (ENSG00000112742) ELOVL4 (ENSG00000118402) SH3BGRL2 (ENSG00000198478) LCA5 (ENSG00000135338) HMGN3 (ENSG00000118418) PHIP (ENSG00000146247) ##22 IRAK1BP1 (ENSG00000146243) MEI4 (ENSG00000269964) HTR1B (ENSG00000135312) IMPG1 (ENSG00000112706) MYO6 (ENSG00000196586) SENP6 (ENSG00000112701) FILIP1 (ENSG00000118407) TMEM30A (ENSG00000112697) COX7A2 (ENSG00000112695) COL12A1 (ENSG00000111799) CD109 (ENSG00000156535) SLC17A5 (ENSG00000119899) EEF1A1 (ENSG00000156508) MTO1 (ENSG00000135297) CGAS (ENSG00000164430) Gorilla MODERN SPECIES 19 TPBG (ENSGGOG00000004297) IBTK (ENSGGOG00000016682) TENT5A (ENSGGOG00000001205) ENSGGOG00000028018 BCKDHB (ENSGGOG00000022865) ENSGGOG00000027600 ENSGGOG00000039332 TTK (ENSGGOG00000008675) ENSGGOG00000024692 ELOVL4 (ENSGGOG00000009359) SH3BGRL2 (ENSGGOG00000027182) LCA5 (ENSGGOG00000007629) ENSGGOG00000044092 HMGN3 (ENSGGOG00000006910) ENSGGOG00000042737 PHIP (ENSGGOG00000001706) ##22 IRAK1BP1 (ENSGGOG00000015202) MEI4 (ENSGGOG00000041152) HTR1B (ENSGGOG00000022590) IMPG1 (ENSGGOG00000025852) ENSGGOG00000026526 MYO6 (ENSGGOG00000011400) SENP6 (ENSGGOG00000006460) FILIP1 (ENSGGOG00000017170) TMEM30A (ENSGGOG00000003491) ENSGGOG00000005865 COL12A1 (ENSGGOG00000009324) CD109 (ENSGGOG00000004082) SLC17A5 (ENSGGOG00000002667) ENSGGOG00000025675 ENSGGOG00000041490 Orangutan MODERN SPECIES 19 ME1 (ENSPPYG00000016806) RWDD2A (ENSPPYG00000040790) PGM3 (ENSPPYG00000016804) DOP1A (ENSPPYG00000016803) UBE3D (ENSPPYG00000016801) TPBG (ENSPPYG00000016800) IBTK (ENSPPYG00000016799) TENT5A (ENSPPYG00000034862) BCKDHB (ENSPPYG00000016796) TTK (ENSPPYG00000016795) ELOVL4 (ENSPPYG00000036336) SH3BGRL2 (ENSPPYG00000039839) LCA5 (ENSPPYG00000016792) HMGN3 (ENSPPYG00000016791) ENSPPYG00000025883 PHIP (ENSPPYG00000016790) ##22 IRAK1BP1 (ENSPPYG00000016789) MEI4 (ENSPPYG00000016788) HTR1B (ENSPPYG00000016787) IMPG1 (ENSPPYG00000016786) MYO6 (ENSPPYG00000016785) SENP6 (ENSPPYG00000016784) FILIP1 (ENSPPYG00000016783) TMEM30A (ENSPPYG00000016782) ENSPPYG00000016781 COL12A1 (ENSPPYG00000016780) ENSPPYG00000032492 CD109 (ENSPPYG00000016779) SLC17A5 (ENSPPYG00000016778) EEF1A1 (ENSPPYG00000016777) MTO1 (ENSPPYG00000016776) Gibbon MODERN SPECIES 8 RWDD2A (ENSNLEG00000012681) PGM3 (ENSNLEG00000012646) DOP1A (ENSNLEG00000012586) UBE3D (ENSNLEG00000012563) TPBG (ENSNLEG00000029072) IBTK (ENSNLEG00000012470) TENT5A (ENSNLEG00000012462) BCKDHB (ENSNLEG00000012437) TTK (ENSNLEG00000012403) ENSNLEG00000028070 ELOVL4 (ENSNLEG00000012396) SH3BGRL2 (ENSNLEG00000036162) LCA5 (ENSNLEG00000012386) HMGN3 (ENSNLEG00000028556) ENSNLEG00000035361 PHIP (ENSNLEG00000012332) ##22 IRAK1BP1 (ENSNLEG00000029737) IPMK (ENSNLEG00000012319) CISD1 (ENSNLEG00000036174) UBE2D1 (ENSNLEG00000012306) TFAM (ENSNLEG00000012295) BICC1 (ENSNLEG00000012284) ENSNLEG00000027716 PHYHIPL (ENSNLEG00000012280) FAM13C (ENSNLEG00000012255) ENSNLEG00000032422 SLC16A9 (ENSNLEG00000012249) CCDC6 (ENSNLEG00000027854) ANK3 (ENSNLEG00000012150) ENSNLEG00000012149 CDK1 (ENSNLEG00000012138) Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT00940000153112.D.n.a.a.a.a.a.a.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00940000154846.b.k.b ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.j ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00550000074801.h.c.a.a.b ENSGT00950000183029.B.c.b.b.b ENSGT00390000011297 Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT00940000153112.D.n.a.a.a.a.a.a.a.b ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.j ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00550000074801.h.c.a.a.b ENSGT00950000183029.B.c.b.b.b ENSGT00390000011297 Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT00940000153112.D.n.a.a.a.a.a.a.a.b ENSGT01050000244838.D ENSGT00940000154172.gb.b.a.c.c.a ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00930000150941.y ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.j ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b.v Cercopithecinae_b ANCESTRAL SPECIES 17 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT00940000153112.D.n.a.a.a.a.a.a.a.b ENSGT01050000244838.D ENSGT00940000154172.gb.b.a.c.c.a ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00390000000903.a.f.b.a ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.j ENSGT00940000154923.C ENSGT00910000148442 Cercopithecinae_d ANCESTRAL SPECIES 125 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT00940000153112.D.n.a.a.a.a.a.a.a.b ENSGT01050000244838.D ENSGT00940000154172.gb.b.a.c.c.a ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00390000000903.a.f.b.a ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.j ENSGT00940000154923.C Sooty mangabey MODERN SPECIES 128 DOP1A (ENSCATG00000034338) UBE3D (ENSCATG00000040671) TPBG (ENSCATG00000017655) IBTK (ENSCATG00000044268) TENT5A (ENSCATG00000044344) BCKDHB (ENSCATG00000032837) ENSCATG00000041525 TTK (ENSCATG00000030166) ENSCATG00000029983 ELOVL4 (ENSCATG00000035594) ENSCATG00000014117 SH3BGRL2 (ENSCATG00000002364) LCA5 (ENSCATG00000023865) HMGN3 (ENSCATG00000032172) ENSCATG00000031954 PHIP (ENSCATG00000027002) ##22 IRAK1BP1 (ENSCATG00000028937) ENSCATG00000043967 MEI4 (ENSCATG00000044930) HTR1B (ENSCATG00000017608) IMPG1 (ENSCATG00000042380) MYO6 (ENSCATG00000041301) SENP6 (ENSCATG00000039823) ENSCATG00000029705 ENSCATG00000014790 FILIP1 (ENSCATG00000029962) TMEM30A (ENSCATG00000038857) ENSCATG00000004329 COL12A1 (ENSCATG00000044903) Drill MODERN SPECIES 605 ENSMLEG00000033248 PHIP (ENSMLEG00000036932) ##22 IRAK1BP1 (ENSMLEG00000003810) Olive baboon MODERN SPECIES 16 PGM3 (ENSPANG00000020093) DOP1A (ENSPANG00000007248) UBE3D (ENSPANG00000018937) ENSPANG00000049310 TPBG (ENSPANG00000004548) IBTK (ENSPANG00000016793) TENT5A (ENSPANG00000021880) BCKDHB (ENSPANG00000020540) TTK (ENSPANG00000000257) ELOVL4 (ENSPANG00000018200) ENSPANG00000003825 SH3BGRL2 (ENSPANG00000007514) LCA5 (ENSPANG00000022607) ENSPANG00000048815 HMGN3 (ENSPANG00000015740) PHIP (ENSPANG00000022800) ##22 IRAK1BP1 (ENSPANG00000022608) ENSPANG00000044429 ENSPANG00000038045 ENSPANG00000046954 MEI4 (ENSPANG00000034147) ENSPANG00000051429 HTR1B (ENSPANG00000015604) IMPG1 (ENSPANG00000019906) MYO6 (ENSPANG00000019225) SENP6 (ENSPANG00000036022) ENSPANG00000038632 FILIP1 (ENSPANG00000018645) TMEM30A (ENSPANG00000026151) ENSPANG00000034091 COL12A1 (ENSPANG00000018518) Macaca ANCESTRAL SPECIES 9 ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00940000153112.D.n.a.a.a.a.a.a.a.b ENSGT01050000244838.D ENSGT00940000154172.gb.b.a.c.c.a ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00930000150941.y ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.j ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b.v ENSGT00390000011297 Macaca_a ANCESTRAL SPECIES 9 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000164709.a.b.b.a.b.a.a.a.a.a.b.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000154172.gb.b.a.c.c.a ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.b.b.b.b ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.j ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b.v ENSGT00390000011297 Crab-eating macaque MODERN SPECIES 14 PGM3 (ENSMFAG00000035703) DOP1A (ENSMFAG00000031960) UBE3D (ENSMFAG00000034654) TPBG (ENSMFAG00000010683) ENSMFAG00000057579 IBTK (ENSMFAG00000034378) TENT5A (ENSMFAG00000063328) ENSMFAG00000055696 BCKDHB (ENSMFAG00000040052) TTK (ENSMFAG00000032875) ELOVL4 (ENSMFAG00000036147) ENSMFAG00000029021 SH3BGRL2 (ENSMFAG00000064741) LCA5 (ENSMFAG00000000256) HMGN3 (ENSMFAG00000032893) PHIP (ENSMFAG00000039797) ##22 IRAK1BP1 (ENSMFAG00000033220) ENSMFAG00000050638 MEI4 (ENSMFAG00000009582) ENSMFAG00000057040 HTR1B (ENSMFAG00000042700) IMPG1 (ENSMFAG00000033339) MYO6 (ENSMFAG00000038795) ENSMFAG00000041950 FILIP1 (ENSMFAG00000001452) TMEM30A (ENSMFAG00000036109) COX7A2 (ENSMFAG00000046193) COL12A1 (ENSMFAG00000034460) ENSMFAG00000053928 ENSMFAG00000061165 ENSMFAG00000057734 Rhesus MODERN SPECIES 14 TPBG (ENSMMUG00000063437) ENSMMUG00000060866 IBTK (ENSMMUG00000010749) TENT5A (ENSMMUG00000023610) ENSMMUG00000056066 BCKDHB (ENSMMUG00000004829) TTK (ENSMMUG00000020207) ELOVL4 (ENSMMUG00000020208) ENSMMUG00000059082 ENSMMUG00000064991 SH3BGRL2 (ENSMMUG00000062749) LCA5 (ENSMMUG00000004356) ENSMMUG00000065130 ENSMMUG00000064069 HMGN3 (ENSMMUG00000004351) PHIP (ENSMMUG00000017186) ##22 IRAK1BP1 (ENSMMUG00000060268) ENSMMUG00000061178 MEI4 (ENSMMUG00000005328) ENSMMUG00000057119 HTR1B (ENSMMUG00000015717) IMPG1 (ENSMMUG00000054471) MYO6 (ENSMMUG00000005032) SENP6 (ENSMMUG00000004491) FILIP1 (ENSMMUG00000019275) TMEM30A (ENSMMUG00000019273) COX7A2 (ENSMMUG00000043152) COL12A1 (ENSMMUG00000019261) ENSMMUG00000056770 CD109 (ENSMMUG00000017806) SLC17A5 (ENSMMUG00000008133) Pig-tailed macaque MODERN SPECIES 240 ENSMNEG00000038234 SH3BGRL2 (ENSMNEG00000014423) LCA5 (ENSMNEG00000022073) HMGN3 (ENSMNEG00000036715) ENSMNEG00000036602 PHIP (ENSMNEG00000040852) ##22 IRAK1BP1 (ENSMNEG00000030912) ENSMNEG00000028187 MEI4 (ENSMNEG00000008925) HTR1B (ENSMNEG00000037775) Vervet Monkey MODERN SPECIES 4 PGM3 (ENSCSAG00000017390) DOP1A (ENSCSAG00000017395) UBE3D (ENSCSAG00000017398) TPBG (ENSCSAG00000000199) IBTK (ENSCSAG00000017400) TENT5A (ENSCSAG00000017402) BCKDHB (ENSCSAG00000017409) TTK (ENSCSAG00000017414) ELOVL4 (ENSCSAG00000017416) ENSCSAG00000017417 SH3BGRL2 (ENSCSAG00000017420) LCA5 (ENSCSAG00000017422) ENSCSAG00000017423 HMGN3 (ENSCSAG00000017426) ENSCSAG00000017429 PHIP (ENSCSAG00000017444) ##22 IRAK1BP1 (ENSCSAG00000017447) MEI4 (ENSCSAG00000017449) HTR1B (ENSCSAG00000000200) IMPG1 (ENSCSAG00000017450) ENSCSAG00000000201 MYO6 (ENSCSAG00000017452) SENP6 (ENSCSAG00000017454) FILIP1 (ENSCSAG00000017456) Rhinopithecus ANCESTRAL SPECIES 552 ENSGT00940000159157 ENSGT00560000077266.a ENSGT00940000154846.b.k.b ENSGT00950000182802.C.g ENSGT00950000182802.C.f.b ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 Golden snub-nosed monkey MODERN SPECIES 1479 SH3BGRL2 (ENSRROG00000035071) LCA5 (ENSRROG00000032824) ENSRROG00000039151 ENSRROG00000040340 ENSRROG00000030817 PHIP (ENSRROG00000044728) ##22 IRAK1BP1 (ENSRROG00000033962) Black snub-nosed monkey MODERN SPECIES 1019 LCA5 (ENSRBIG00000039986) ENSRBIG00000035148 HMGN3 (ENSRBIG00000035703) ENSRBIG00000037227 PHIP (ENSRBIG00000022274) ##22 Platyrrhini ANCESTRAL SPECIES 2 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00390000009130.a.a.a.a.b.b ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00390000011297 Cebidae ANCESTRAL SPECIES 5 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000156277 ENSGT00390000009130.a.a.a.a.b.b ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00390000011297 Marmoset MODERN SPECIES 16 ENSCJAG00000076458 IBTK (ENSCJAG00000009418) ENSCJAG00000079096 TENT5A (ENSCJAG00000038361) BCKDHB (ENSCJAG00000010953) TTK (ENSCJAG00000010886) ENSCJAG00000074460 ENSCJAG00000072038 ENSCJAG00000085807 ELOVL4 (ENSCJAG00000066970) ENSCJAG00000008265 SH3BGRL2 (ENSCJAG00000010860) LCA5 (ENSCJAG00000046658) HMGN3 (ENSCJAG00000010800) ENSCJAG00000080059 PHIP (ENSCJAG00000010691) ##22 IRAK1BP1 (ENSCJAG00000010684) ENSCJAG00000083515 ENSCJAG00000072659 MEI4 (ENSCJAG00000034767) ENSCJAG00000085763 HTR1B (ENSCJAG00000022374) ENSCJAG00000069680 IMPG1 (ENSCJAG00000010664) MYO6 (ENSCJAG00000010541) ENSCJAG00000060163 SENP6 (ENSCJAG00000010386) FILIP1 (ENSCJAG00000010350) TMEM30A (ENSCJAG00000010325) COL12A1 (ENSCJAG00000010171) ENSCJAG00000079018 Cebidae_a ANCESTRAL SPECIES 59 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00950000183198.c.a.b.b ENSGT00940000156277 ENSGT00390000009130.a.a.a.a.b.b ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00900000143584 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 Bolivian squirrel monkey MODERN SPECIES 49 TSPO2 (ENSSBOG00000018379) APOBEC2 (ENSSBOG00000028496) OARD1 (ENSSBOG00000021101) NFYA (ENSSBOG00000036087) TENT5A (ENSSBOG00000024859) ENSSBOG00000027517 BCKDHB (ENSSBOG00000014654) TTK (ENSSBOG00000003469) ELOVL4 (ENSSBOG00000035080) SH3BGRL2 (ENSSBOG00000015357) ENSSBOG00000005848 ENSSBOG00000032510 ENSSBOG00000011035 LCA5 (ENSSBOG00000025390) HMGN3 (ENSSBOG00000013698) PHIP (ENSSBOG00000029154) ##22 ENSSBOG00000026956 IRAK1BP1 (ENSSBOG00000027886) MEI4 (ENSSBOG00000028015) HTR1B (ENSSBOG00000004639) ENSSBOG00000025689 IMPG1 (ENSSBOG00000032314) MYO6 (ENSSBOG00000027600) SENP6 (ENSSBOG00000024005) Capuchin MODERN SPECIES 98 LRRD1 (ENSCCAG00000020349) KRIT1 (ENSCCAG00000011082) ANKIB1 (ENSCCAG00000029252) ENSCCAG00000020281 PEX1 (ENSCCAG00000027665) RBM48 (ENSCCAG00000033867) ENSCCAG00000029835 CDK6 (ENSCCAG00000032979) BCKDHB (ENSCCAG00000027459) TTK (ENSCCAG00000030838) ELOVL4 (ENSCCAG00000033860) SH3BGRL2 (ENSCCAG00000008769) LCA5 (ENSCCAG00000021857) HMGN3 (ENSCCAG00000028701) ENSCCAG00000034727 PHIP (ENSCCAG00000026223) ##22 Mas night monkey MODERN SPECIES 463 TENT5A (ENSANAG00000023993) BCKDHB (ENSANAG00000030972) TTK (ENSANAG00000032499) ELOVL4 (ENSANAG00000021308) SH3BGRL2 (ENSANAG00000023671) LCA5 (ENSANAG00000015279) HMGN3 (ENSANAG00000030647) ENSANAG00000036577 PHIP (ENSANAG00000037755) ##22 IRAK1BP1 (ENSANAG00000028639) MEI4 (ENSANAG00000022641) HTR1B (ENSANAG00000019789) ENSANAG00000022555 IMPG1 (ENSANAG00000027456) MYO6 (ENSANAG00000035523) ENSANAG00000021045 SENP6 (ENSANAG00000021321) FILIP1 (ENSANAG00000034974) TMEM30A (ENSANAG00000027476) COX7A2 (ENSANAG00000034774) COL12A1 (ENSANAG00000023522) CD109 (ENSANAG00000037433) SLC17A5 (ENSANAG00000037674) ENSANAG00000028383 Tarsier MODERN SPECIES 2953 PHIP (ENSTSYG00000012722) ##22 IRAK1BP1 (ENSTSYG00000003541) Strepsirrhini ANCESTRAL SPECIES 7 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00390000011297 ENSGT01050000244827.E Lemuriformes ANCESTRAL SPECIES 3 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.a.r ENSGT00390000011297 ENSGT01050000244827.E Mouse lemur MODERN SPECIES 28 ME1 (ENSMICG00000013756) RWDD2A (ENSMICG00000013751) PGM3 (ENSMICG00000013735) DOP1A (ENSMICG00000009599) UBE3D (ENSMICG00000006683) TPBG (ENSMICG00000046765) IBTK (ENSMICG00000005321) TENT5A (ENSMICG00000006596) ENSMICG00000033445 BCKDHB (ENSMICG00000003277) TTK (ENSMICG00000003271) LCA5 (ENSMICG00000014607) ELOVL4 (ENSMICG00000026958) SH3BGRL2 (ENSMICG00000037578) HMGN3 (ENSMICG00000012580) PHIP (ENSMICG00000000134) ##22 IRAK1BP1 (ENSMICG00000044942) MEI4 (ENSMICG00000038415) HTR1B (ENSMICG00000012414) ENSMICG00000029528 IMPG1 (ENSMICG00000012422) MYO6 (ENSMICG00000012391) SENP6 (ENSMICG00000005250) FILIP1 (ENSMICG00000031943) TMEM30A (ENSMICG00000015757) COX7A2 (ENSMICG00000015747) COL12A1 (ENSMICG00000015681) CD109 (ENSMICG00000009612) SLC17A5 (ENSMICG00000016403) ENSMICG00000037627 MTO1 (ENSMICG00000032161) Lemuriformes_a ANCESTRAL SPECIES 4 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00940000162741.j ENSGT00390000011297 Greater bamboo lemur MODERN SPECIES 1402 HMGN3 (ENSPSMG00000004659) PHIP (ENSPSMG00000004600) ##22 Coquerels sifaka MODERN SPECIES 345 TENT5A (ENSPCOG00000014245) BCKDHB (ENSPCOG00000001558) TTK (ENSPCOG00000020369) ELOVL4 (ENSPCOG00000027157) SH3BGRL2 (ENSPCOG00000010718) LCA5 (ENSPCOG00000026990) HMGN3 (ENSPCOG00000020626) ENSPCOG00000027594 PHIP (ENSPCOG00000025776) ##22 IRAK1BP1 (ENSPCOG00000018402) MEI4 (ENSPCOG00000023963) HTR1B (ENSPCOG00000014248) ENSPCOG00000021537 ENSPCOG00000007245 IMPG1 (ENSPCOG00000013809) MYO6 (ENSPCOG00000016731) SENP6 (ENSPCOG00000021433) ENSPCOG00000008115 FILIP1 (ENSPCOG00000023751) TMEM30A (ENSPCOG00000017026) COX7A2 (ENSPCOG00000021379) COL12A1 (ENSPCOG00000026081) ENSPCOG00000026844 CD109 (ENSPCOG00000015200) Bushbaby MODERN SPECIES 222 TPBG (ENSOGAG00000029928) IBTK (ENSOGAG00000011943) TENT5A (ENSOGAG00000003247) ENSOGAG00000000645 ENSOGAG00000026751 TTK (ENSOGAG00000011000) ELOVL4 (ENSOGAG00000010998) ENSOGAG00000005194 LCA5 (ENSOGAG00000014641) HMGN3 (ENSOGAG00000016487) PHIP (ENSOGAG00000002923) ##22 IRAK1BP1 (ENSOGAG00000002920) ENSOGAG00000030489 HTR1B (ENSOGAG00000015251) IMPG1 (ENSOGAG00000010505) MYO6 (ENSOGAG00000010499) SENP6 (ENSOGAG00000000115) FILIP1 (ENSOGAG00000032192) TMEM30A (ENSOGAG00000015718) COL12A1 (ENSOGAG00000015700) ENSOGAG00000033179 CD109 (ENSOGAG00000008674) SLC17A5 (ENSOGAG00000008673) Laurasiatheria ANCESTRAL SPECIES 7 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.a ENSGT00950000183029.B.c.b.b.a Eulipotyphla ANCESTRAL SPECIES 1212 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 Hedgehog MODERN SPECIES 4302 PHIP (ENSEEUG00000000653) ##22 Common shrew MODERN SPECIES 3276 PHIP (ENSSARG00000007366) ##22 IRAK1BP1 (ENSSARG00000007362) Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT01050000244986.b.b.b.b ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00400000024746 Artiodactyla ANCESTRAL SPECIES 19 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT01050000244986.b.b.b.b ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00400000024746 Suina ANCESTRAL SPECIES 18 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00390000011297 Chacoan peccary MODERN SPECIES 61 ME1 (ENSCWAG00000010897) RWDD2A (ENSCWAG00000010932) PGM3 (ENSCWAG00000010966) DOP1A (ENSCWAG00000011136) UBE3D (ENSCWAG00000011379) TPBG (ENSCWAG00000012210) IBTK (ENSCWAG00000012235) TENT5A (ENSCWAG00000012430) BCKDHB (ENSCWAG00000012495) ENSCWAG00000012547 TTK (ENSCWAG00000012596) ELOVL4 (ENSCWAG00000013012) SH3BGRL2 (ENSCWAG00000013054) LCA5 (ENSCWAG00000013077) HMGN3 (ENSCWAG00000013116) PHIP (ENSCWAG00000013192) ##22 IRAK1BP1 (ENSCWAG00000013531) MEI4 (ENSCWAG00000013632) Pig MODERN SPECIES UBE3D (ENSSSCG00000026346) ENSSSCG00000053568 TPBG (ENSSSCG00000004458) ENSSSCG00000032485 IBTK (ENSSSCG00000004460) ENSSSCG00000031482 TENT5A (ENSSSCG00000004464) ENSSSCG00000046535 BCKDHB (ENSSSCG00000004465) TTK (ENSSSCG00000004466) ELOVL4 (ENSSSCG00000028080) SH3BGRL2 (ENSSSCG00000032015) LCA5 (ENSSSCG00000004469) ENSSSCG00000046076 HMGN3 (ENSSSCG00000004470) PHIP (ENSSSCG00000004473) ##22 ENSSSCG00000049571 IRAK1BP1 (ENSSSCG00000004472) MEI4 (ENSSSCG00000034152) HTR1B (ENSSSCG00000004475) IMPG1 (ENSSSCG00000004477) MYO6 (ENSSSCG00000004478) SENP6 (ENSSSCG00000020702) FILIP1 (ENSSSCG00000004479) TMEM30A (ENSSSCG00000033155) COX7A2 (ENSSSCG00000004480) COL12A1 (ENSSSCG00000004484) ENSSSCG00000053516 CD109 (ENSSSCG00000004485) SLC17A5 (ENSSSCG00000004486) ENSSSCG00000004489 Artiodactyla_a ANCESTRAL SPECIES 21 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT01050000244986.b.b.b.b ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00400000024746 Camelidae ANCESTRAL SPECIES 26 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.b ENSGT00940000154923.C Alpaca MODERN SPECIES 982 HMGN3 (ENSVPAG00000005645) PHIP (ENSVPAG00000005644) ##22 IRAK1BP1 (ENSVPAG00000005643) Arabian camel MODERN SPECIES 34 ME1 (ENSCDRG00005005271) RWDD2A (ENSCDRG00005005849) PGM3 (ENSCDRG00005005863) DOP1A (ENSCDRG00005005991) UBE3D (ENSCDRG00005006326) ENSCDRG00005006408 TPBG (ENSCDRG00005006420) IBTK (ENSCDRG00005006444) TENT5A (ENSCDRG00005006725) BCKDHB (ENSCDRG00005006787) TTK (ENSCDRG00005006825) ELOVL4 (ENSCDRG00005007188) ENSCDRG00005007228 LCA5 (ENSCDRG00005007255) HMGN3 (ENSCDRG00005007299) PHIP (ENSCDRG00005007551) ##22 IRAK1BP1 (ENSCDRG00005020245) MEI4 (ENSCDRG00005020254) HTR1B (ENSCDRG00005020265) IMPG1 (ENSCDRG00005020278) MYO6 (ENSCDRG00005020355) SENP6 (ENSCDRG00005020561) FILIP1 (ENSCDRG00005020589) TMEM30A (ENSCDRG00005020603) COX7A2 (ENSCDRG00005020619) COL12A1 (ENSCDRG00005020641) ENSCDRG00005020689 ENSCDRG00005020738 ENSCDRG00005020742 ENSCDRG00005020749 ENSCDRG00005020757 Artiodactyla_b ANCESTRAL SPECIES 18 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT01050000244986.b.b.b.b ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000158351.v.b ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b Cetacea ANCESTRAL SPECIES 18 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT01040000241005 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157.g.a ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000158351.v.b ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b.a Odontoceti ANCESTRAL SPECIES 18 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT01040000241005 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157.g.a ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000158351.v.b ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b.a Sperm whale MODERN SPECIES 2 RWDD2A (ENSPCTG00005002545) PGM3 (ENSPCTG00005002491) DOP1A (ENSPCTG00005002411) UBE3D (ENSPCTG00005002362) TPBG (ENSPCTG00005002354) IBTK (ENSPCTG00005002273) ENSPCTG00005002223 TENT5A (ENSPCTG00005002197) ENSPCTG00005002179 BCKDHB (ENSPCTG00005002151) TTK (ENSPCTG00005002117) ELOVL4 (ENSPCTG00005002097) ENSPCTG00005002089 LCA5 (ENSPCTG00005002073) HMGN3 (ENSPCTG00005002049) PHIP (ENSPCTG00005000850) ##22 Odontoceti_a ANCESTRAL SPECIES 16 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT01040000241005 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157.g.a ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a ENSGT00940000154923.C ENSGT00940000158351.v.b ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b.a ENSGT00390000011297 Dolphin MODERN SPECIES 905 PHIP (ENSTTRG00000000236) ##22 Odontoceti_b ANCESTRAL SPECIES 18 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT01040000241005 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157.g.a ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a ENSGT00940000154923.C ENSGT00940000158351.v.b ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b.a ENSGT00390000011297 Vaquita MODERN SPECIES 3 ME1 (ENSPSNG00000008172) RWDD2A (ENSPSNG00000008215) PGM3 (ENSPSNG00000008313) DOP1A (ENSPSNG00000008521) UBE3D (ENSPSNG00000008711) TPBG (ENSPSNG00000008751) IBTK (ENSPSNG00000008931) TENT5A (ENSPSNG00000009114) ENSPSNG00000009167 ENSPSNG00000009304 BCKDHB (ENSPSNG00000009418) TTK (ENSPSNG00000009607) ELOVL4 (ENSPSNG00000009784) LCA5 (ENSPSNG00000009858) HMGN3 (ENSPSNG00000009951) PHIP (ENSPSNG00000009757) ##22 IRAK1BP1 (ENSPSNG00000009861) MEI4 (ENSPSNG00000009926) HTR1B (ENSPSNG00000010001) IMPG1 (ENSPSNG00000010066) MYO6 (ENSPSNG00000010535) SENP6 (ENSPSNG00000010770) FILIP1 (ENSPSNG00000010913) TMEM30A (ENSPSNG00000011113) ENSPSNG00000011260 COL12A1 (ENSPSNG00000011498) CD109 (ENSPSNG00000012621) SLC17A5 (ENSPSNG00000017062) ENSPSNG00000017147 MTO1 (ENSPSNG00000017236) CGAS (ENSPSNG00000017365) Monodontidae ANCESTRAL SPECIES 18 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT01040000241005 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157.g.a ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00950000182909.b.b.b.e ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a ENSGT00940000154923.C ENSGT00940000158351.v.b ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b.a Beluga whale MODERN SPECIES 1 RWDD2A (ENSDLEG00000000501) PGM3 (ENSDLEG00000000530) DOPEY1 (ENSDLEG00000000629) UBE3D (ENSDLEG00000000890) TPBG (ENSDLEG00000000941) IBTK (ENSDLEG00000000959) ENSDLEG00000000996 FAM46A (ENSDLEG00000001008) ENSDLEG00000001032 BCKDHB (ENSDLEG00000001062) TTK (ENSDLEG00000001116) ELOVL4 (ENSDLEG00000001200) ENSDLEG00000001213 LCA5 (ENSDLEG00000001234) HMGN3 (ENSDLEG00000001251) PHIP (ENSDLEG00000001386) ##22 IRAK1BP1 (ENSDLEG00000002494) ENSDLEG00000002506 HTR1B (ENSDLEG00000002516) IMPG1 (ENSDLEG00000002533) MYO6 (ENSDLEG00000002587) SENP6 (ENSDLEG00000002695) FILIP1 (ENSDLEG00000003138) TMEM30A (ENSDLEG00000003156) ENSDLEG00000003178 COL12A1 (ENSDLEG00000003318) ENSDLEG00000003964 CD109 (ENSDLEG00000003996) SLC17A5 (ENSDLEG00000004174) EEF1A1 (ENSDLEG00000004186) MTO1 (ENSDLEG00000004196) Narwhal MODERN SPECIES 301 PGM3 (ENSMMNG00015021925) DOP1A (ENSMMNG00015021912) UBE3D (ENSMMNG00015021906) TPBG (ENSMMNG00015021904) IBTK (ENSMMNG00015021895) ENSMMNG00015021890 TENT5A (ENSMMNG00015021884) PIP4P2 (ENSMMNG00015021881) ENSMMNG00015021875 BCKDHB (ENSMMNG00015021866) TTK (ENSMMNG00015021853) ELOVL4 (ENSMMNG00015021845) ENSMMNG00015021842 LCA5 (ENSMMNG00015021836) HMGN3 (ENSMMNG00015021834) PHIP (ENSMMNG00015021816) ##22 IRAK1BP1 (ENSMMNG00015021809) ENSMMNG00015021804 MEI4 (ENSMMNG00015021797) HTR1B (ENSMMNG00015021791) IMPG1 (ENSMMNG00015021769) MYO6 (ENSMMNG00015021711) SENP6 (ENSMMNG00015021664) FILIP1 (ENSMMNG00015021639) TMEM30A (ENSMMNG00015021614) ENSMMNG00015021598 COL12A1 (ENSMMNG00015020073) ENSMMNG00015019164 CD109 (ENSMMNG00015019089) SLC17A5 (ENSMMNG00015019025) ENSMMNG00015018976 Blue whale MODERN SPECIES 3 UBE3D (ENSBMSG00010014192) ENSBMSG00010014221 TPBG (ENSBMSG00010014234) IBTK (ENSBMSG00010014267) ENSBMSG00010014338 ENSBMSG00010014356 TENT5A (ENSBMSG00010014385) ENSBMSG00010014491 ENSBMSG00010014511 BCKDHB (ENSBMSG00010014540) TTK (ENSBMSG00010014603) ELOVL4 (ENSBMSG00010014673) ENSBMSG00010014719 LCA5 (ENSBMSG00010014743) HMGN3 (ENSBMSG00010014805) PHIP (ENSBMSG00010014858) ##22 IRAK1BP1 (ENSBMSG00010014893) ENSBMSG00010014910 MEI4 (ENSBMSG00010014940) HTR1B (ENSBMSG00010014962) IMPG1 (ENSBMSG00010015013) MYO6 (ENSBMSG00010015279) SENP6 (ENSBMSG00010015609) FILIP1 (ENSBMSG00010015706) TMEM30A (ENSBMSG00010015805) ENSBMSG00010015938 COL12A1 (ENSBMSG00010016088) ENSBMSG00010016468 ENSBMSG00010016479 ENSBMSG00010016500 CD109 (ENSBMSG00010016534) Pecora ANCESTRAL SPECIES 19 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT01050000244986.b.b.b.b.b.b ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a.a.b.b ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000158351.v.b ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.a Yarkand deer MODERN SPECIES 20 ME1 (ENSCHYG00000026847) RWDD2A (ENSCHYG00000026842) PGM3 (ENSCHYG00000026828) DOP1A (ENSCHYG00000026767) UBE3D (ENSCHYG00000026692) TPBG (ENSCHYG00000026659) IBTK (ENSCHYG00000026567) ENSCHYG00000026524 TENT5A (ENSCHYG00000026512) BCKDHB (ENSCHYG00000026473) TTK (ENSCHYG00000026401) ELOVL4 (ENSCHYG00000026383) SH3BGRL2 (ENSCHYG00000026371) LCA5 (ENSCHYG00000026364) ENSCHYG00000026336 PHIP (ENSCHYG00000026244) ##22 IRAK1BP1 (ENSCHYG00000026223) ENSCHYG00000026204 MEI4 (ENSCHYG00000026200) ENSCHYG00000026188 HTR1B (ENSCHYG00000026182) ENSCHYG00000026165 IMPG1 (ENSCHYG00000026013) ENSCHYG00000025974 MYO6 (ENSCHYG00000025820) SENP6 (ENSCHYG00000025652) FILIP1 (ENSCHYG00000025519) TMEM30A (ENSCHYG00000025455) ENSCHYG00000025429 COL12A1 (ENSCHYG00000024520) ENSCHYG00000024388 Percora_a ANCESTRAL SPECIES 21 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a.a.b.b ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000158351.v.b ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b Bovidae ANCESTRAL SPECIES 21 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00940000154185.e ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT01100000265064 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000158351.v.b ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b Bovinae ANCESTRAL SPECIES 31 ENSGT00390000000509 ENSGT00940000154185.e ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT01100000265064 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00950000183087.A.a.a.a.b.b.b.a ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00940000154915.mb.a.b ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000158351.v.b.b ENSGT00940000155926 ENSGT00940000160370 American bison MODERN SPECIES 3276 ENSBBBG00000012947 ENSBBBG00000002560 ENSBBBG00000002559 ELOVL4 (ENSBBBG00000012937) ENSBBBG00000002553 SH3BGRL2 (ENSBBBG00000012917) LCA5 (ENSBBBG00000012909) HMGN3 (ENSBBBG00000002546) PHIP (ENSBBBG00000012882) ##22 IRAK1BP1 (ENSBBBG00000006752) ENSBBBG00000006744 MEI4 (ENSBBBG00000025407) HTR1B (ENSBBBG00000006724) ENSBBBG00000025384 IMPG1 (ENSBBBG00000025343) MYO6 (ENSBBBG00000025149) SENP6 (ENSBBBG00000024359) FILIP1 (ENSBBBG00000008820) TMEM30A (ENSBBBG00000006288) ENSBBBG00000024128 COL12A1 (ENSBBBG00000008642) ENSBBBG00000006123 ENSBBBG00000006122 ENSBBBG00000023393 Bos ANCESTRAL SPECIES 19 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00940000154185.e ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00950000183087.A.a.a.a.b.b.b.a ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00940000154915.mb.a.b ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00390000005254.i.a.a.a.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724.i ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000158351.v.b.b ENSGT00940000155926 Bos_a ANCESTRAL SPECIES 18 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00940000154185.e ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00950000183087.A.a.a.a.b.b.b.a ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00940000154915.mb.a.b ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00390000005254.i.a.a.a.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724.i ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 Domestic yak MODERN SPECIES 1 DOP1A (ENSBGRG00000015553) ENSBGRG00000015819 UBE3D (ENSBGRG00000015882) TPBG (ENSBGRG00000016189) IBTK (ENSBGRG00000003635) ENSBGRG00000003704 TENT5A (ENSBGRG00000003767) ENSBGRG00000003829 BCKDHB (ENSBGRG00000003847) TTK (ENSBGRG00000003901) ELOVL4 (ENSBGRG00000004114) ENSBGRG00000004196 SH3BGRL2 (ENSBGRG00000004217) ENSBGRG00000004232 ENSBGRG00000004306 PHIP (ENSBGRG00000004460) ##22 IRAK1BP1 (ENSBGRG00000004671) MEI4 (ENSBGRG00000004738) HTR1B (ENSBGRG00000004799) ENSBGRG00000004810 IMPG1 (ENSBGRG00000004826) MYO6 (ENSBGRG00000004931) SENP6 (ENSBGRG00000005342) FILIP1 (ENSBGRG00000005876) TMEM30A (ENSBGRG00000005958) ENSBGRG00000006074 COL12A1 (ENSBGRG00000006189) ENSBGRG00000007839 CD109 (ENSBGRG00000007902) SLC17A5 (ENSBGRG00000008882) EEF1A1 (ENSBGRG00000009070) Wild yak MODERN SPECIES 864 LCA5 (ENSBMUG00000003893) HMGN3 (ENSBMUG00000003819) PHIP (ENSBMUG00000002682) ##22 IRAK1BP1 (ENSBMUG00000000401) ENSBMUG00000000383 MEI4 (ENSBMUG00000000283) HTR1B (ENSBMUG00000000210) ENSBMUG00000000193 Bos_b ANCESTRAL SPECIES 24 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00940000154915.mb.a.a ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00390000005254.i.a.a.a.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724.i ENSGT00950000183010.a.a.a.a.d ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a.a.b.b ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000158351.v.b.b Hybrid Bos Indicus MODERN SPECIES 28 DOP1A (ENSBIXG00005006119) UBE3D (ENSBIXG00005013466) TPBG (ENSBIXG00005013543) ENSBIXG00005013564 IBTK (ENSBIXG00005006921) ENSBIXG00005013858 ENSBIXG00005013870 TENT5A (ENSBIXG00005013992) BCKDHB (ENSBIXG00005014060) TTK (ENSBIXG00005014151) ELOVL4 (ENSBIXG00005001850) SH3BGRL2 (ENSBIXG00005014226) LCA5 (ENSBIXG00005014266) ENSBIXG00005014277 HMGN3 (ENSBIXG00005014355) PHIP (ENSBIXG00005014424) ##22 IRAK1BP1 (ENSBIXG00005001929) ENSBIXG00005014458 ENSBIXG00005001941 ENSBIXG00005014467 MEI4 (ENSBIXG00005014504) HTR1B (ENSBIXG00005005419) ENSBIXG00005014540 ENSBIXG00005014555 IMPG1 (ENSBIXG00005014572) ENSBIXG00005006341 MYO6 (ENSBIXG00005014655) ENSBIXG00005014745 ENSBIXG00005002089 FILIP1 (ENSBIXG00005014816) ENSBIXG00005007540 Cow MODERN SPECIES 28 RWDD2A (ENSBTAG00000015911) PGM3 (ENSBTAG00000000679) ENSBTAG00000050489 DOP1A (ENSBTAG00000000676) UBE3D (ENSBTAG00000019418) TPBG (ENSBTAG00000039477) IBTK (ENSBTAG00000026716) TENT5A (ENSBTAG00000000995) BCKDHB (ENSBTAG00000012096) TTK (ENSBTAG00000005456) ELOVL4 (ENSBTAG00000015498) SH3BGRL2 (ENSBTAG00000055014) LCA5 (ENSBTAG00000043950) ENSBTAG00000048976 ENSBTAG00000052031 PHIP (ENSBTAG00000024688) ##22 IRAK1BP1 (ENSBTAG00000020825) ENSBTAG00000034662 MEI4 (ENSBTAG00000054151) HTR1B (ENSBTAG00000037429) ENSBTAG00000016391 IMPG1 (ENSBTAG00000021175) MYO6 (ENSBTAG00000016751) SENP6 (ENSBTAG00000005869) ENSBTAG00000032382 FILIP1 (ENSBTAG00000000053) TMEM30A (ENSBTAG00000005100) COX7A2 (ENSBTAG00000005096) COL12A1 (ENSBTAG00000020056) ENSBTAG00000053911 ENSBTAG00000054709 Caprinae ANCESTRAL SPECIES 33 ENSGT00390000000509 ENSGT00940000154185.e ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT01100000265064 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00940000164915 ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00390000018570.a.h ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a.a.b.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00390000011297 Rambouillet Sheep MODERN SPECIES 24 ME1 (ENSOARG00020017565) RWDD2A (ENSOARG00020017526) PGM3 (ENSOARG00020017303) ENSOARG00020017259 ENSOARG00020017239 DOP1A (ENSOARG00020015929) UBE3D (ENSOARG00020015817) TPBG (ENSOARG00020015750) IBTK (ENSOARG00020015424) TENT5A (ENSOARG00020015278) BCKDHB (ENSOARG00020015183) TTK (ENSOARG00020014923) ELOVL4 (ENSOARG00020014877) SH3BGRL2 (ENSOARG00020014825) HMGN3 (ENSOARG00020014671) PHIP (ENSOARG00020014287) ##22 IRAK1BP1 (ENSOARG00020014232) HTR1B (ENSOARG00020014195) ENSOARG00020014128 IMPG1 (ENSOARG00020013908) MYO6 (ENSOARG00020013312) SENP6 (ENSOARG00020012532) FILIP1 (ENSOARG00020012409) TMEM30A (ENSOARG00020012208) ENSOARG00020012134 COL12A1 (ENSOARG00020010010) CD109 (ENSOARG00020020955) SLC17A5 (ENSOARG00020020626) ENSOARG00020020554 MTO1 (ENSOARG00020020228) ENSOARG00020020006 Goat MODERN SPECIES 28 RWDD2A (ENSCHIG00000015927) PGM3 (ENSCHIG00000017055) ENSCHIG00000015298 DOP1A (ENSCHIG00000022288) UBE3D (ENSCHIG00000015917) TPBG (ENSCHIG00000002547) IBTK (ENSCHIG00000013319) ENSCHIG00000014025 TENT5A (ENSCHIG00000024262) BCKDHB (ENSCHIG00000006319) TTK (ENSCHIG00000010109) ELOVL4 (ENSCHIG00000017259) SH3BGRL2 (ENSCHIG00000022115) LCA5 (ENSCHIG00000023136) ENSCHIG00000026635 PHIP (ENSCHIG00000009356) ##22 IRAK1BP1 (ENSCHIG00000018136) MEI4 (ENSCHIG00000016616) ENSCHIG00000009645 HTR1B (ENSCHIG00000008916) ENSCHIG00000020561 IMPG1 (ENSCHIG00000008626) MYO6 (ENSCHIG00000018457) SENP6 (ENSCHIG00000009406) FILIP1 (ENSCHIG00000019437) TMEM30A (ENSCHIG00000023159) ENSCHIG00000016010 COL12A1 (ENSCHIG00000019062) ENSCHIG00000019183 CD109 (ENSCHIG00000022242) SLC17A5 (ENSCHIG00000002917) Siberian musk deer MODERN SPECIES 54 BCKDHB (ENSMMSG00000000206) TTK (ENSMMSG00000000162) ELOVL4 (ENSMMSG00000000111) SH3BGRL2 (ENSMMSG00000000083) LCA5 (ENSMMSG00000003161) ENSMMSG00000003149 HMGN3 (ENSMMSG00000003121) PHIP (ENSMMSG00000003088) ##22 IRAK1BP1 (ENSMMSG00000003065) MEI4 (ENSMMSG00000003047) HTR1B (ENSMMSG00000003037) ENSMMSG00000003024 IMPG1 (ENSMMSG00000002976) MYO6 (ENSMMSG00000002820) SENP6 (ENSMMSG00000002705) FILIP1 (ENSMMSG00000002667) TMEM30A (ENSMMSG00000002637) ENSMMSG00000002619 COL12A1 (ENSMMSG00000001435) ENSMMSG00000001281 CD109 (ENSMMSG00000001208) SLC17A5 (ENSMMSG00000001151) ENSMMSG00000001122 Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00960000188409 ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00400000024746 Carnivora ANCESTRAL SPECIES 4 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00960000188409 ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00400000024746 Caniformia ANCESTRAL SPECIES 3 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00960000188409 ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00940000172381 ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b Caniformia_b ANCESTRAL SPECIES 6 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00960000190192 ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00960000188409 ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00940000172381 ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.a.x Ursidae ANCESTRAL SPECIES 35 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00960000188409 ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00940000176100 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00940000172381 ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 Ursus ANCESTRAL SPECIES 95 ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00960000188409 ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00390000016356.a.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00950000183095.a.b.a.b.a.g ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00940000176100 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00940000172381 ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.a.x American black bear MODERN SPECIES 1116 ENSUAMG00000005974 PHIP (ENSUAMG00000001670) ##22 IRAK1BP1 (ENSUAMG00000001468) ENSUAMG00000001455 Polar bear MODERN SPECIES 117 DOP1A (ENSUMAG00000018401) UBE3D (ENSUMAG00000018316) ENSUMAG00000018309 ENSUMAG00000018308 IBTK (ENSUMAG00000016891) TENT5A (ENSUMAG00000016762) ENSUMAG00000016755 BCKDHB (ENSUMAG00000016743) ENSUMAG00000016735 TTK (ENSUMAG00000016731) ELOVL4 (ENSUMAG00000016728) ENSUMAG00000016722 SH3BGRL2 (ENSUMAG00000016721) LCA5 (ENSUMAG00000016709) HMGN3 (ENSUMAG00000016702) PHIP (ENSUMAG00000015736) ##22 IRAK1BP1 (ENSUMAG00000015580) ENSUMAG00000015578 MEI4 (ENSUMAG00000015560) HTR1B (ENSUMAG00000015515) ENSUMAG00000015486 IMPG1 (ENSUMAG00000015416) MYO6 (ENSUMAG00000013807) SENP6 (ENSUMAG00000013661) FILIP1 (ENSUMAG00000013648) TMEM30A (ENSUMAG00000013645) COX7A2 (ENSUMAG00000013642) COL12A1 (ENSUMAG00000012583) CD109 (ENSUMAG00000012341) SLC17A5 (ENSUMAG00000012317) ENSUMAG00000012312 Giant Panda MODERN SPECIES 10 RWDD2A (ENSAMEG00000007008) PGM3 (ENSAMEG00000006967) ENSAMEG00000027475 UBE3D (ENSAMEG00000006863) TPBG (ENSAMEG00000012877) IBTK (ENSAMEG00000012824) TENT5A (ENSAMEG00000012820) ENSAMEG00000010199 BCKDHB (ENSAMEG00000012810) TTK (ENSAMEG00000012771) ELOVL4 (ENSAMEG00000012763) ENSAMEG00000030036 ENSAMEG00000030465 LCA5 (ENSAMEG00000024167) HMGN3 (ENSAMEG00000011031) PHIP (ENSAMEG00000012897) ##22 IRAK1BP1 (ENSAMEG00000012945) ENSAMEG00000029235 ENSAMEG00000026473 MEI4 (ENSAMEG00000009728) HTR1B (ENSAMEG00000019602) ENSAMEG00000025079 ENSAMEG00000031110 IMPG1 (ENSAMEG00000016653) MYO6 (ENSAMEG00000016664) SENP6 (ENSAMEG00000016720) FILIP1 (ENSAMEG00000014484) TMEM30A (ENSAMEG00000014460) COX7A2 (ENSAMEG00000014453) COL12A1 (ENSAMEG00000014368) ENSAMEG00000024225 Mustelinae ANCESTRAL SPECIES 99 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00940000172381 ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT01100000263517.b.d.m.a.a.a.a.d.b.v ENSGT01100000263517.b.d.m.a.a.a.a.c.l ENSGT00940000161275 ENSGT00950000183032.B.b.b ENSGT00390000004803 Ferret MODERN SPECIES 198 TENT5A (ENSMPUG00000018098) BCKDHB (ENSMPUG00000018097) TTK (ENSMPUG00000018096) ELOVL4 (ENSMPUG00000018095) SH3BGRL2 (ENSMPUG00000018094) LCA5 (ENSMPUG00000018093) HMGN3 (ENSMPUG00000018092) ENSMPUG00000018091 PHIP (ENSMPUG00000018090) ##22 IRAK1BP1 (ENSMPUG00000018089) MEI4 (ENSMPUG00000018088) HTR1B (ENSMPUG00000018381) IMPG1 (ENSMPUG00000018087) MYO6 (ENSMPUG00000018086) SENP6 (ENSMPUG00000018085) FILIP1 (ENSMPUG00000018084) TMEM30A (ENSMPUG00000018083) ENSMPUG00000018081 ENSMPUG00000018080 LRP11 (ENSMPUG00000018079) PCMT1 (ENSMPUG00000018078) NUP43 (ENSMPUG00000018077) LATS1 (ENSMPUG00000018076) KATNA1 (ENSMPUG00000018075) American mink MODERN SPECIES 65 TENT5A (ENSNVIG00000022754) ENSNVIG00000022748 BCKDHB (ENSNVIG00000022741) TTK (ENSNVIG00000022712) ELOV4 (ENSNVIG00000022709) SH3L2 (ENSNVIG00000022707) LCA5 (ENSNVIG00000022698) HMGN3 (ENSNVIG00000022683) PHIP (ENSNVIG00000022663) ##22 IRAK1BP1 (ENSNVIG00000022653) ENSNVIG00000022651 ENSNVIG00000022649 MEI4 (ENSNVIG00000022645) HTR1B (ENSNVIG00000022638) ENSNVIG00000022634 IMPG1 (ENSNVIG00000022598) ENSNVIG00000022586 MYO6 (ENSNVIG00000022385) SENP6 (ENSNVIG00000022305) FILIP1 (ENSNVIG00000022282) CC50A (ENSNVIG00000022263) ENSNVIG00000022240 ENSNVIG00000022225 ENSNVIG00000022205 Canidae ANCESTRAL SPECIES 6 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00960000188126 ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00390000011297 Canis_lupus ANCESTRAL SPECIES 11 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00960000188126 ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00960000189784 ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.a.d.b ENSGT00390000001319.pb ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 Dingo MODERN SPECIES 370 ENSCAFG00020014623 ENSCAFG00020014615 ENSCAFG00020014613 UBE3D (ENSCAFG00020014612) TPBG (ENSCAFG00020014610) ENSCAFG00020014609 IBTK (ENSCAFG00020012725) TENT5A (ENSCAFG00020012616) BCKDHB (ENSCAFG00020012610) TTK (ENSCAFG00020012567) ELOVL4 (ENSCAFG00020012560) ENSCAFG00020012555 LCA5 (ENSCAFG00020012549) ENSCAFG00020012530 ENSCAFG00020012526 PHIP (ENSCAFG00020012198) ##22 IRAK1BP1 (ENSCAFG00020012158) ENSCAFG00020012153 ENSCAFG00020012138 ENSCAFG00020012134 MEI4 (ENSCAFG00020012119) HTR1B (ENSCAFG00020012099) ENSCAFG00020012087 IMPG1 (ENSCAFG00020012039) ENSCAFG00020012028 MYO6 (ENSCAFG00020010746) SENP6 (ENSCAFG00020010681) FILIP1 (ENSCAFG00020010672) TMEM30A (ENSCAFG00020010667) ENSCAFG00020010664 ENSCAFG00020010663 Dog MODERN SPECIES 3 RWDD2A (ENSCAFG00845011493) PGM3 (ENSCAFG00845011304) DOP1A (ENSCAFG00845010778) UBE3D (ENSCAFG00845010555) TPBG (ENSCAFG00845010452) ENSCAFG00845010394 IBTK (ENSCAFG00845009845) TENT5A (ENSCAFG00845009609) ENSCAFG00845009538 ENSCAFG00845009481 TTK (ENSCAFG00845009329) ELOVL4 (ENSCAFG00845009234) ENSCAFG00845009189 LCA5 (ENSCAFG00845009129) HMGN3 (ENSCAFG00845008994) PHIP (ENSCAFG00845008879) ##22 IRAK1BP1 (ENSCAFG00845008821) RPL37 (ENSCAFG00845008734) MEI4 (ENSCAFG00845008694) HTR1B (ENSCAFG00845008653) ENSCAFG00845008633 ENSCAFG00845008599 IMPG1 (ENSCAFG00845008408) ENSCAFG00845008350 ENSCAFG00845008278 MYO6 (ENSCAFG00845008090) ENSCAFG00845007913 FILIP1 (ENSCAFG00845007846) TMEM30A (ENSCAFG00845007678) ENSCAFG00845007548 ENSCAFG00845007358 Red fox MODERN SPECIES 64 PGM3 (ENSVVUG00000019448) ENSVVUG00000019347 ENSVVUG00000019282 ENSVVUG00000019268 UBE3D (ENSVVUG00000019261) TPBG (ENSVVUG00000019258) ENSVVUG00000019256 IBTK (ENSVVUG00000019246) TENT5A (ENSVVUG00000019239) BCKDHB (ENSVVUG00000019223) TTK (ENSVVUG00000019206) ELOVL4 (ENSVVUG00000019199) ENSVVUG00000019190 LCA5 (ENSVVUG00000019184) HMGN3 (ENSVVUG00000019173) PHIP (ENSVVUG00000016183) ##22 IRAK1BP1 (ENSVVUG00000016082) ENSVVUG00000016055 MEI4 (ENSVVUG00000016043) HTR1B (ENSVVUG00000016034) ENSVVUG00000016021 ENSVVUG00000016016 IMPG1 (ENSVVUG00000015999) MYO6 (ENSVVUG00000014229) SENP6 (ENSVVUG00000014116) FILIP1 (ENSVVUG00000014093) TMEM30A (ENSVVUG00000014078) ENSVVUG00000014077 COL12A1 (ENSVVUG00000014007) ENSVVUG00000013998 CD109 (ENSVVUG00000013948) Felidae ANCESTRAL SPECIES 5 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00950000183123.g.a.a.b ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000154194.u.b ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000163409 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT01040000241919 ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 Panthera ANCESTRAL SPECIES 7 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00950000183123.g.a.a.b ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000154194.u.b ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000163409 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT01040000241919 ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 Tiger MODERN SPECIES 319 RWDD2A (ENSPTIG00000020567) PGM3 (ENSPTIG00000013778) DOP1A (ENSPTIG00000003914) UBE3D (ENSPTIG00000020967) ENSPTIG00000019051 TPBG (ENSPTIG00000002979) IBTK (ENSPTIG00000009265) TENT5A (ENSPTIG00000008656) ENSPTIG00000008243 BCKDHB (ENSPTIG00000005064) TTK (ENSPTIG00000022073) ELOVL4 (ENSPTIG00000022061) SH3BGRL2 (ENSPTIG00000022050) LCA5 (ENSPTIG00000021880) HMGN3 (ENSPTIG00000020090) PHIP (ENSPTIG00000016313) ##22 IRAK1BP1 (ENSPTIG00000008985) MEI4 (ENSPTIG00000008324) HTR1B (ENSPTIG00000001714) IMPG1 (ENSPTIG00000020524) MYO6 (ENSPTIG00000019124) ENSPTIG00000000742 SENP6 (ENSPTIG00000011844) FILIP1 (ENSPTIG00000009205) TMEM30A (ENSPTIG00000006144) COX7A2 (ENSPTIG00000002276) COL12A1 (ENSPTIG00000021337) CD109 (ENSPTIG00000012445) SLC17A5 (ENSPTIG00000012062) ENSPTIG00000007871 MTO1 (ENSPTIG00000001836) Panthera_a ANCESTRAL SPECIES 4 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00950000183123.g.a.a.b ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000154194.u.b ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000163409 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT01040000241919 ENSGT00940000154923.C ENSGT00910000148442 ENSGT00940000155926 ENSGT00940000160370 lion MODERN SPECIES 5 RWDD2A (ENSPLOG00000011559) PGM3 (ENSPLOG00000010962) DOP1A (ENSPLOG00000010823) UBE3D (ENSPLOG00000010749) ENSPLOG00000010672 TPBG (ENSPLOG00000021428) IBTK (ENSPLOG00000021378) TENT5A (ENSPLOG00000021336) ENSPLOG00000021305 BCKDHB (ENSPLOG00000021261) TTK (ENSPLOG00000021164) ELOVL4 (ENSPLOG00000021117) ENSPLOG00000021097 LCA5 (ENSPLOG00000021073) HMGN3 (ENSPLOG00000020987) PHIP (ENSPLOG00000020760) ##22 IRAK1BP1 (ENSPLOG00000020709) MEI4 (ENSPLOG00000020653) HTR1B (ENSPLOG00000020635) IMPG1 (ENSPLOG00000020513) MYO6 (ENSPLOG00000020376) SENP6 (ENSPLOG00000020085) FILIP1 (ENSPLOG00000019975) TMEM30A (ENSPLOG00000019900) COX7A2 (ENSPLOG00000019826) ENSPLOG00000019787 COL12A1 (ENSPLOG00000017531) ENSPLOG00000017162 CD109 (ENSPLOG00000016428) SLC17A5 (ENSPLOG00000016238) EEF1A1 (ENSPLOG00000016117) leopard MODERN SPECIES 8 PGM3 (ENSPPRG00000011022) DOP1A (ENSPPRG00000023488) UBE3D (ENSPPRG00000023053) ENSPPRG00000022946 TPBG (ENSPPRG00000015067) IBTK (ENSPPRG00000004813) TENT5A (ENSPPRG00000004922) ENSPPRG00000005033 BCKDHB (ENSPPRG00000006623) TTK (ENSPPRG00000009963) ELOVL4 (ENSPPRG00000010326) SH3BGRL2 (ENSPPRG00000010472) LCA5 (ENSPPRG00000011464) ENSPPRG00000011529 HMGN3 (ENSPPRG00000012712) PHIP (ENSPPRG00000014536) ##22 IRAK1BP1 (ENSPPRG00000017467) ENSPPRG00000018765 MEI4 (ENSPPRG00000019121) HTR1B (ENSPPRG00000015888) ENSPPRG00000020940 IMPG1 (ENSPPRG00000000464) MYO6 (ENSPPRG00000011793) ENSPPRG00000016260 SENP6 (ENSPPRG00000014513) FILIP1 (ENSPPRG00000016179) TMEM30A (ENSPPRG00000019740) COX7A2 (ENSPPRG00000022374) COL12A1 (ENSPPRG00000010756) ENSPPRG00000017367 Cat MODERN SPECIES 236 ME1 (ENSFCAG00000031619) RWDD2A (ENSFCAG00000033230) PGM3 (ENSFCAG00000005721) DOP1A (ENSFCAG00000005718) ENSFCAG00000028796 UBE3D (ENSFCAG00000010582) IBTK (ENSFCAG00000023674) TENT5A (ENSFCAG00000037187) ENSFCAG00000022496 BCKDHB (ENSFCAG00000010609) TTK (ENSFCAG00000027168) ELOVL4 (ENSFCAG00000037848) SH3BGRL2 (ENSFCAG00000046162) LCA5 (ENSFCAG00000027762) HMGN3 (ENSFCAG00000032108) PHIP (ENSFCAG00000009591) ##22 IRAK1BP1 (ENSFCAG00000027121) MEI4 (ENSFCAG00000036772) HTR1B (ENSFCAG00000007703) ENSFCAG00000047290 ENSFCAG00000047606 IMPG1 (ENSFCAG00000014900) MYO6 (ENSFCAG00000030371) ENSFCAG00000029338 SENP6 (ENSFCAG00000025782) FILIP1 (ENSFCAG00000009789) TMEM30A (ENSFCAG00000022485) COX7A2 (ENSFCAG00000009787) ENSFCAG00000049642 COL12A1 (ENSFCAG00000027408) CD109 (ENSFCAG00000012653) Laurasiatheria_c ANCESTRAL SPECIES 6 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00960000188409 ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00940000172381 ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00950000183029.B.d Chiroptera ANCESTRAL SPECIES 3 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a.d ENSGT00940000154868.a.a.c ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00940000172381 ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.d ENSGT00390000011297 Microchiroptera ANCESTRAL SPECIES 4 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a.d ENSGT00940000154868.a.a.c ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT00910000147771 ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00940000172381 ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.d ENSGT00390000011297 Greater horseshoe bat MODERN SPECIES 21 PGM3 (ENSRFEG00010017991) DOP1A (ENSRFEG00010017862) UBE3D (ENSRFEG00010017799) ENSRFEG00010017782 TPBG (ENSRFEG00010017768) IBTK (ENSRFEG00010017635) TENT5A (ENSRFEG00010017526) ENSRFEG00010017518 BCKDHB (ENSRFEG00010017450) TTK (ENSRFEG00010017385) ENSRFEG00010017350 ELOVL4 (ENSRFEG00010017306) SH3BGRL2 (ENSRFEG00010017256) LCA5 (ENSRFEG00010017203) HMGN3 (ENSRFEG00010017114) PHIP (ENSRFEG00010017065) ##22 IRAK1BP1 (ENSRFEG00010016999) MEI4 (ENSRFEG00010016966) HTR1B (ENSRFEG00010016948) ENSRFEG00010016909 IMPG1 (ENSRFEG00010016509) ENSRFEG00010016474 ENSRFEG00010016453 MYO6 (ENSRFEG00010016225) SENP6 (ENSRFEG00010016063) FILIP1 (ENSRFEG00010015930) TMEM30A (ENSRFEG00010015749) ENSRFEG00010015634 COL12A1 (ENSRFEG00010015379) ENSRFEG00010015345 ENSRFEG00010015285 Microbat MODERN SPECIES 1008 ME1 (ENSMLUG00000003851) RWDD2A (ENSMLUG00000003848) PGM3 (ENSMLUG00000003841) DOP1A (ENSMLUG00000003806) UBE3D (ENSMLUG00000001428) ENSMLUG00000028483 IBTK (ENSMLUG00000013990) TENT5A (ENSMLUG00000013945) BCKDHB (ENSMLUG00000001452) TTK (ENSMLUG00000006042) ELOVL4 (ENSMLUG00000025479) SH3BGRL2 (ENSMLUG00000010371) ENSMLUG00000023046 LCA5 (ENSMLUG00000010351) HMGN3 (ENSMLUG00000005389) PHIP (ENSMLUG00000005375) ##22 IRAK1BP1 (ENSMLUG00000001498) HTR1B (ENSMLUG00000005772) Megabat MODERN SPECIES 1176 PHIP (ENSPVAG00000006808) ##22 Equus ANCESTRAL SPECIES 29 ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00960000188409 ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533.b ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.e.b ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.b.b ENSGT00390000011297 ENSGT01100000263980 Horse MODERN SPECIES 1 ME1 (ENSECAG00000024482) RWDD2A (ENSECAG00000024338) PGM3 (ENSECAG00000023967) DOP1A (ENSECAG00000004513) UBE3D (ENSECAG00000023053) TPBG (ENSECAG00000044527) IBTK (ENSECAG00000014738) TENT5A (ENSECAG00000014207) ENSECAG00000003000 BCKDHB (ENSECAG00000009840) TTK (ENSECAG00000023776) ELOVL4 (ENSECAG00000022969) SH3BGRL2 (ENSECAG00000022926) LCA5 (ENSECAG00000020987) HMGN3 (ENSECAG00000032694) PHIP (ENSECAG00000010684) ##22 IRAK1BP1 (ENSECAG00000009253) ENSECAG00000045512 ENSECAG00000049697 ENSECAG00000051286 MEI4 (ENSECAG00000007058) ENSECAG00000056953 ENSECAG00000035404 ENSECAG00000059682 IMPG1 (ENSECAG00000019440) MYO6 (ENSECAG00000024053) SENP6 (ENSECAG00000021001) FILIP1 (ENSECAG00000018916) TMEM30A (ENSECAG00000013904) COX7A2 (ENSECAG00000012469) COL12A1 (ENSECAG00000025065) Donkey MODERN SPECIES 16 RWDD2A (ENSEASG00005029644) PGM3 (ENSEASG00005005563) DOP1A (ENSEASG00005005552) UBE3D (ENSEASG00005005546) TPBG (ENSEASG00005030319) ENSEASG00005005540 IBTK (ENSEASG00005005533) TENT5A (ENSEASG00005037555) ENSEASG00005005529 BCKDHB (ENSEASG00005005528) TTK (ENSEASG00005005460) ELOVL4 (ENSEASG00005005437) SH3BGRL2 (ENSEASG00005031703) LCA5 (ENSEASG00005005428) HMGN3 (ENSEASG00005026064) PHIP (ENSEASG00005017280) ##22 IRAK1BP1 (ENSEASG00005018565) MEI4 (ENSEASG00005018566) HTR1B (ENSEASG00005018567) ENSEASG00005018568 IMPG1 (ENSEASG00005018572) MYO6 (ENSEASG00005018621) SENP6 (ENSEASG00005019562) FILIP1 (ENSEASG00005002972) TMEM30A (ENSEASG00005002982) COL12A1 (ENSEASG00005003217) CD109 (ENSEASG00005004082) SLC17A5 (ENSEASG00005004314) ENSEASG00005023174 ENSEASG00005035561 MTO1 (ENSEASG00005004331) Atlantogenata ANCESTRAL SPECIES 3 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B.c.b.a ENSGT00390000011297 ENSGT01050000244827.E Xenarthra ANCESTRAL SPECIES 1616 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 Armadillo MODERN SPECIES 2780 PHIP (ENSDNOG00000018741) ##22 IRAK1BP1 (ENSDNOG00000040039) ENSDNOG00000035334 Sloth MODERN SPECIES 3806 PHIP (ENSCHOG00000005359) ##22 Afrotheria ANCESTRAL SPECIES 13 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00390000011297 ENSGT01050000244827.E ENSGT00940000163229 ENSGT00940000162097 Afrotheria_a ANCESTRAL SPECIES 13 ENSGT00390000000155.b ENSGT00950000183134.c.a.b ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a.f ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00390000011297 ENSGT01050000244827.E ENSGT00940000163229 ENSGT00940000162097 Elephant MODERN SPECIES 1 PRSS35 (ENSLAFG00000003794) ME1 (ENSLAFG00000005140) RWDD2A (ENSLAFG00000015271) PGM3 (ENSLAFG00000005135) DOP1A (ENSLAFG00000014865) UBE3D (ENSLAFG00000007627) TPBG (ENSLAFG00000018246) IBTK (ENSLAFG00000008458) TENT5A (ENSLAFG00000002223) BCKDHB (ENSLAFG00000010944) TTK (ENSLAFG00000029449) ELOVL4 (ENSLAFG00000003948) SH3BGRL2 (ENSLAFG00000013625) LCA5 (ENSLAFG00000008092) HMGN3 (ENSLAFG00000029893) PHIP (ENSLAFG00000000801) ##22 IRAK1BP1 (ENSLAFG00000001753) HTR1B (ENSLAFG00000030204) ENSLAFG00000008264 ENSLAFG00000029677 MYO6 (ENSLAFG00000008249) SENP6 (ENSLAFG00000004947) FILIP1 (ENSLAFG00000004548) TMEM30A (ENSLAFG00000002315) COX7A2 (ENSLAFG00000002313) COL12A1 (ENSLAFG00000010089) CD109 (ENSLAFG00000006753) SLC17A5 (ENSLAFG00000008545) MTO1 (ENSLAFG00000007793) CGAS (ENSLAFG00000010167) ENSLAFG00000012755 Hyrax MODERN SPECIES 3469 PHIP (ENSPCAG00000003391) ##22 IRAK1BP1 (ENSPCAG00000003366) Tenrec MODERN SPECIES 4166 ENSETEG00000000577 PHIP (ENSETEG00000000570) ##22 Platypus MODERN SPECIES 10 TTK (ENSOANG00000001287) ELOVL4 (ENSOANG00000045930) COL12A1 (ENSOANG00000001292) COX7A2 (ENSOANG00000037756) TMEM30A (ENSOANG00000040334) FILIP1 (ENSOANG00000001298) FBXL4 (ENSOANG00000001299) ENSOANG00000040274 MMS22L (ENSOANG00000001301) ENSOANG00000050615 GPR63 (ENSOANG00000040527) FHL5 (ENSOANG00000001302) UFL1 (ENSOANG00000001306) ENSOANG00000037045 ENSOANG00000048225 PHIP (ENSOANG00000000948) ##22 ENSOANG00000028680 ENSOANG00000046953 MYO6 (ENSOANG00000000943) ENSOANG00000038139 ENSOANG00000000941 METTL24 (ENSOANG00000043034) CDC40 (ENSOANG00000000939) WASF1 (ENSOANG00000000937) #23 FIG4 (ENSOANG00000000932) AK9 (ENSOANG00000000929) ZBTB24 (ENSOANG00000041585) ENSOANG00000046114 ENSOANG00000036917 ENSOANG00000042878 ENSOANG00000037347 Anura ANCESTRAL SPECIES 8 ENSGT00390000007224.a ENSGT00390000000509 ENSGT00390000016421.b.b ENSGT00390000003986 ENSGT00940000154868.a.a ENSGT00940000156277 ENSGT00940000157191 ENSGT00940000156533 ENSGT00390000015719.c ENSGT00950000182984.a ENSGT01050000244838.D ENSGT00940000169423.b ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00390000013856 ENSGT01010000222287.B.b.a.b.b ENSGT00530000063503.a.b ENSGT00940000156078 ENSGT00940000155724 ENSGT00950000182852.A.a.a ENSGT00390000004660.C.a.a ENSGT00940000154550.a ENSGT00940000154923.C ENSGT00940000155926 ENSGT00940000160370 ENSGT00950000183029.B ENSGT01050000244827.E ENSGT00940000163653 Frog MODERN SPECIES 5 irf6.2 (ENSXETG00000018661) ENSXETG00000041840 ibtk (ENSXETG00000018679) tent5a (ENSXETG00000037475) bckdhb (ENSXETG00000011773) nr0b2 (ENSXETG00000040488) tent5c (ENSXETG00000011768) ddx43 (ENSXETG00000011767) ENSXETG00000043889 elovl4 (ENSXETG00000045777) ENSXETG00000042562 sh3bgrl2 (ENSXETG00000025848) lca5 (ENSXETG00000033824) hmgn3 (ENSXETG00000025850) ENSXETG00000046820 phip (ENSXETG00000011747) ##22 mei4 (ENSXETG00000033955) htr1b (ENSXETG00000011743) impg1 (ENSXETG00000003611) myo6 (ENSXETG00000003610) senp6 (ENSXETG00000003609) filip1 (ENSXETG00000003608) tmem30a (ENSXETG00000003607) cox7a2 (ENSXETG00000025853) col12a1 (ENSXETG00000003603) cd109 (ENSXETG00000031004) ENSXETG00000039477 ENSXETG00000037232 ENSXETG00000034784 ENSXETG00000047948 slc17a5 (ENSXETG00000002117) Leishan spiny toad MODERN SPECIES 7 ENSLLEG00000017853 ENSLLEG00000017835 ENSLLEG00000017816 BCKDHB (ENSLLEG00000017490) ENSLLEG00000017457 ENSLLEG00000017431 TTK (ENSLLEG00000017246) ELOVL4 (ENSLLEG00000017174) ENSLLEG00000014621 ENSLLEG00000014488 SH3BGRL2 (ENSLLEG00000030727) LCA5 (ENSLLEG00000030704) ENSLLEG00000030691 HMGN3 (ENSLLEG00000030682) ENSLLEG00000030677 PHIP (ENSLLEG00000030637) ##22 IRAK1BP1 (ENSLLEG00000030603) MEI4 (ENSLLEG00000030592) ENSLLEG00000030582 ENSLLEG00000030576 ENSLLEG00000030570 MYO6 (ENSLLEG00000030400) SENP6 (ENSLLEG00000030308) ENSLLEG00000030288 FILIP1 (ENSLLEG00000030282) ENSLLEG00000030271 TMEM30A (ENSLLEG00000030247) COX7A2 (ENSLLEG00000030235) ENSLLEG00000030228 COL12A1 (ENSLLEG00000030137) ENSLLEG00000030086 Coelacanth MODERN SPECIES 1479 LCA5 (ENSLACG00000010435) PHIP (ENSLACG00000003633) ##22 Actinopterygii ANCESTRAL SPECIES 69 ENSGT00940000156509 ENSGT00940000156248 ENSGT00940000156274 ENSGT00940000156799 ENSGT00940000155726 ENSGT00940000159614 ENSGT00940000155712 ENSGT00940000160174 ENSGT00950000182978.A.a.a ENSGT00390000018318 ENSGT00940000156674 ENSGT00940000171557 ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00390000007183 ENSGT00940000155913 ENSGT00390000004028 ENSGT00390000003560 ENSGT00390000011642 ENSGT00940000154481.a.b ENSGT00940000158133 ENSGT00390000012924.a ENSGT00530000064023 ENSGT00390000013337 ENSGT00940000158401 Reedfish MODERN SPECIES 11 alkal2a (ENSECRG00000003871) tmem18 (ENSECRG00000003864) sntg2 (ENSECRG00000003853) ENSECRG00000003847 TPO (ENSECRG00000003649) sgk1 (ENSECRG00000003620) tbpl1 (ENSECRG00000003606) tcf21 (ENSECRG00000003595) eya4 (ENSECRG00000003549) rps12 (ENSECRG00000003506) slc18b1 (ENSECRG00000003490) slc18b1 (ENSECRG00000003372) sh3bgrl2 (ENSECRG00000003312) LCA5 (ENSECRG00000003287) ENSECRG00000003269 PHIP (ENSECRG00000003175) ##22 ENSECRG00000003107 irak1bp1 (ENSECRG00000003097) tbx18 (ENSECRG00000002962) DYNLT1 (ENSECRG00000002940) tmem181 (ENSECRG00000002921) tulp4a (ENSECRG00000002895) gtf2h5 (ENSECRG00000002881) serac1 (ENSECRG00000002858) myct1a (ENSECRG00000002842) SYNE1 (ENSECRG00000002759) esr1 (ENSECRG00000002701) CCDC170 (ENSECRG00000002672) armt1 (ENSECRG00000002644) rmnd1 (ENSECRG00000002627) zbtb2b (ENSECRG00000002618) Neopterygii ANCESTRAL SPECIES 88 ENSGT00940000156509 ENSGT00940000156248 ENSGT00940000156274 ENSGT00940000156799 ENSGT00940000155726 ENSGT00940000159614 ENSGT00940000155712 ENSGT00940000160174 ENSGT00950000182978.A.a.a ENSGT00390000018318 ENSGT00940000156674 ENSGT00940000165353 ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00390000007183 ENSGT00940000155913 ENSGT00390000004028 ENSGT00390000003560 ENSGT00390000011642 ENSGT00940000154481.a.b ENSGT00940000158133 ENSGT00530000064023 ENSGT00390000013337 ENSGT00940000158401 ENSGT00730000111244 Spotted gar MODERN SPECIES 647 myb (ENSLOCG00000016218) hbs1l (ENSLOCG00000016221) aldh8a1 (ENSLOCG00000016225) SGK1 (ENSLOCG00000016226) ENSLOCG00000016227 slc2a12 (ENSLOCG00000016228) tbpl1 (ENSLOCG00000016230) tcf21 (ENSLOCG00000016232) eya4 (ENSLOCG00000016233) rps12 (ENSLOCG00000016236) slc18b1 (ENSLOCG00000016237) ENSLOCG00000016239 sh3bgrl2 (ENSLOCG00000016240) LCA5 (ENSLOCG00000016242) HMGN3 (ENSLOCG00000016243) PHIP (ENSLOCG00000016244) ##22 ENSLOCG00000016251 irak1bp1 (ENSLOCG00000016253) tbx18 (ENSLOCG00000016254) ENSLOCG00000016257 DYNLT1 (ENSLOCG00000016258) tmem181 (ENSLOCG00000016260) tulp4a (ENSLOCG00000016263) gtf2h5 (ENSLOCG00000016267) serac1 (ENSLOCG00000016268) myct1a (ENSLOCG00000016271) SYNE1 (ENSLOCG00000016272) esr1 (ENSLOCG00000016285) CCDC170 (ENSLOCG00000016291) rmnd1 (ENSLOCG00000016293) zbtb2b (ENSLOCG00000016295) Osteoglossocephalai ANCESTRAL SPECIES 183 ENSGT00950000183215.c.a.a ENSGT00940000159413 ENSGT00940000156248 ENSGT00940000156274 ENSGT00940000156799 ENSGT00940000155726 ENSGT00940000159614 ENSGT00940000155712 ENSGT00940000160174 ENSGT00950000182978.A.a.a ENSGT00390000018318 ENSGT00940000165353 ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 Osteoglossiformes ANCESTRAL SPECIES 16 ENSGT00940000156248.oc.b ENSGT00940000156274 ENSGT00940000156799 ENSGT00940000155726 ENSGT00940000156399.vb ENSGT00940000164496.b ENSGT00940000159614 ENSGT00940000155712 ENSGT00940000160174 ENSGT00950000182978.A.a.a ENSGT00390000018318 ENSGT00940000165353 ENSGT00940000159157 ENSGT00560000077266.a ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00940000154531.bc ENSGT00390000007183 ENSGT00940000155913.d ENSGT00390000004028 ENSGT00390000003560 ENSGT00390000011642 ENSGT00940000154481.b ENSGT00530000064023 ENSGT00390000013337 ENSGT00940000158401 ENSGT00730000111244.a.b Asian bonytongue MODERN SPECIES armc1l (ENSSFOG00015017825) mtfr2 (ENSSFOG00015017810) MYB (ENSSFOG00015017613) hbs1l (ENSSFOG00015017544) aldh8a1 (ENSSFOG00015033318) sgk1 (ENSSFOG00015017351) slc2a12 (ENSSFOG00015017339) tbpl1 (ENSSFOG00015017311) tcf21 (ENSSFOG00015024810) eya4 (ENSSFOG00015017200) rps12 (ENSSFOG00015017146) ENSSFOG00015024872 sh3bgrl2 (ENSSFOG00015030166) LCA5 (ENSSFOG00015030512) HMGN3 (ENSSFOG00015017064) PHIP (ENSSFOG00015016980) ##22 ENSSFOG00015031240 irak1bp1 (ENSSFOG00015016960) tbx18 (ENSSFOG00015024779) ENSSFOG00015016905 DYNLT1 (ENSSFOG00015016851) tmem181 (ENSSFOG00015016813) tulp4a (ENSSFOG00015016795) gtf2h5 (ENSSFOG00015016783) serac1 (ENSSFOG00015016699) myct1a (ENSSFOG00015016675) armt1 (ENSSFOG00015016388) rmnd1 (ENSSFOG00015016335) zbtb2b (ENSSFOG00015029201) akap12b (ENSSFOG00015016302) mthfd1l (ENSSFOG00015016042) P. kingsleyae MODERN SPECIES 83 rnf146 (ENSPKIG00000004102) ENSPKIG00000004088 KCNF1 (ENSPKIG00000004076) HPCAL1 (ENSPKIG00000004065) ENSPKIG00000004037 RHOB (ENSPKIG00000004010) ENSPKIG00000003988 tbpl1 (ENSPKIG00000003946) tcf21 (ENSPKIG00000003912) eya4 (ENSPKIG00000024193) rps12 (ENSPKIG00000024161) zgc:153284 (ENSPKIG00000024153) sh3bgrl2 (ENSPKIG00000024140) LCA5 (ENSPKIG00000024115) HMGN3 (ENSPKIG00000024106) PHIP (ENSPKIG00000024039) ##22 ENSPKIG00000023976 irak1bp1 (ENSPKIG00000023989) tbx18 (ENSPKIG00000023964) ENSPKIG00000023952 DYNLT1 (ENSPKIG00000023942) tmem181 (ENSPKIG00000023911) tulp4a (ENSPKIG00000023873) gtf2h5 (ENSPKIG00000023857) serac1 (ENSPKIG00000023790) myct1a (ENSPKIG00000023763) ENSPKIG00000023758 Clupeocephala ANCESTRAL SPECIES 140 ENSGT00650000094590 ENSGT01080000257573 ENSGT00940000156274 ENSGT00940000156799 ENSGT00940000155726 ENSGT00940000159614 ENSGT00940000155712 ENSGT00940000160174 ENSGT00950000182978.A.a.a ENSGT00390000018318 ENSGT00940000171557 ENSGT00940000165353 ENSGT00940000159157 ENSGT00560000077266.a ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 ENSGT00490000043329.a.b.g.b ENSGT01030000234527.A.a.a.b.b ENSGT00940000155459.x.a ENSGT00940000153897.b.b ENSGT00940000153739.a.b.s ENSGT00940000156975 ENSGT00530000063834.e.b Otomorpha ANCESTRAL SPECIES 320 ENSGT00950000183215.c.a.a ENSGT00940000159413 ENSGT00940000156274 ENSGT00940000156799 ENSGT00940000155726 ENSGT00940000159614 ENSGT00940000155712 ENSGT00940000160174 ENSGT00950000182978.A.a.a ENSGT00390000018318 ENSGT00940000171557 ENSGT00940000165353 ENSGT00940000159157 ENSGT00560000077266.a ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b Clupeiformes ANCESTRAL SPECIES 185 ENSGT00950000183215.c.a.a ENSGT00940000159413 ENSGT00940000156248.c ENSGT00940000156274 ENSGT00940000156799 ENSGT00940000155726 ENSGT00940000159614 ENSGT00940000155712 ENSGT00940000160174 ENSGT00950000182978.A.a.a ENSGT00390000018318 ENSGT00940000157260.t ENSGT00940000159157 ENSGT00560000077266.a ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00950000183168.B.b ENSGT00390000000663 ENSGT00940000159826 ENSGT00940000163170 ENSGT00940000161401 ENSGT00940000153609.b ENSGT00940000156693 ENSGT00390000012341 ENSGT00950000182985.b.a ENSGT00390000004348 Atlantic herring MODERN SPECIES 6 PDE7B (ENSCHAG00000020119) myb (ENSCHAG00000020460) hbs1l (ENSCHAG00000020630) aldh8a1 (ENSCHAG00000022413) ENSCHAG00000022437 SGK1 (ENSCHAG00000022452) slc2a12 (ENSCHAG00000022555) tbpl1 (ENSCHAG00000022560) tcf21 (ENSCHAG00000022568) eya4 (ENSCHAG00000022588) rps12 (ENSCHAG00000022894) ENSCHAG00000022901 ENSCHAG00000022904 sh3bgrl2 (ENSCHAG00000022916) LCA5 (ENSCHAG00000022924) PHIP (ENSCHAG00000023066) ##22 ENSCHAG00000024875 irak1bp1 (ENSCHAG00000024881) tbx18 (ENSCHAG00000024883) ENSCHAG00000024897 selenoi (ENSCHAG00000024907) sesn1 (ENSCHAG00000024966) ENSCHAG00000025042 rpain (ENSCHAG00000025061) FOXO3 (ENSCHAG00000025066) afg1lb (ENSCHAG00000025071) snx3 (ENSCHAG00000025091) nr2e1 (ENSCHAG00000025099) OSTM1 (ENSCHAG00000025111) ppp1r14c (ENSCHAG00000025115) iyd (ENSCHAG00000000452) Denticle herring MODERN SPECIES 321 aldh8a1 (ENSDCDG00000023837) SGK1 (ENSDCDG00000023846) slc2a12 (ENSDCDG00000024524) tbpl1 (ENSDCDG00000024533) tcf21 (ENSDCDG00000024544) eya4 (ENSDCDG00000024561) ENSDCDG00000024596 rps12 (ENSDCDG00000024597) ENSDCDG00000024605 sh3bgrl2 (ENSDCDG00000024610) LCA5 (ENSDCDG00000024637) hmgn3 (ENSDCDG00000024642) PHIP (ENSDCDG00000024784) ##22 ENSDCDG00000026866 Otophysi ANCESTRAL SPECIES 178 ENSGT00950000183215.c.a.a ENSGT00940000156248 ENSGT01080000257573 ENSGT00940000156274 ENSGT00940000156799 ENSGT00940000155726 ENSGT00940000159614 ENSGT00940000155712 ENSGT00940000160174 ENSGT00950000182978.A.a.a ENSGT00390000018318 ENSGT00940000165353 ENSGT00940000159157 ENSGT00560000077266.a ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b Cyprinoidei ANCESTRAL SPECIES ENSGT00940000156248 ENSGT01080000257573 ENSGT00940000156274 ENSGT00940000156799 ENSGT00940000155726 ENSGT00940000159614 ENSGT00940000155712 ENSGT00940000160174 ENSGT00950000182978.A.a.a ENSGT00390000018318 ENSGT00940000171557 ENSGT00940000165353 ENSGT00940000159157 ENSGT00560000077266.a ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00950000182982.B.c.b ENSGT00940000158762.f ENSGT00390000013839.c.b ENSGT00400000022086.b.a.b ENSGT01070000253766.B.f.b ENSGT00940000161936 ENSGT00940000156364.a.b ENSGT00950000183032.A.b.b.b.b ENSGT00940000164630.a.a ENSGT00950000183032.A.b.b.b.a.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 76 ENSGT00940000164948.d ENSGT00950000183215.c.a.a.j ENSGT00940000156248.a ENSGT00940000156274.l ENSGT00940000156799.b ENSGT00940000155726.lb ENSGT00940000159614.b ENSGT00940000155712.j ENSGT00940000160174.g ENSGT00950000182978.A.a.a.d ENSGT00390000018318.r.a ENSGT00940000165353.a.a ENSGT00940000159157 ENSGT00560000077266.a.b ENSGT01040000240523.a ENSGT00950000183107.a.a.e ##22 ENSGT00530000065281.b ENSGT00390000012588.b ENSGT00940000155566.q.a ENSGT00940000164803.c.b ENSGT00950000183117.b.uc ENSGT00950000182982.B.c.b.b.b ENSGT00940000158762.f.a ENSGT00390000013839.c.b.a ENSGT00400000022086.b.a.b.a ENSGT01070000253766.B.f.b.y ENSGT00940000161936.j ENSGT00940000156364.a.b.a ENSGT00950000183032.A.b.b.b.a.b.a.b ENSGT00520000055578.a.a.c.pb ENSGT01000000220342 Goldfish DUPLICATION Goldfish MODERN SPECIES 2242 PHIP (ENSCARG00000066044) ##22 ENSCARG00000065990 irak1bp1 (ENSCARG00000065984) tbx18 (ENSCARG00000065971) ENSCARG00000065968 selenoi (ENSCARG00000065932) ENSCARG00000065924 ENSCARG00000065742 CABLES2 (ENSCARG00000065701) Goldfish MODERN SPECIES 42 ormdl2 (ENSCARG00000068601) nemp1 (ENSCARG00000068541) armc1l (ENSCARG00000068513) myb (ENSCARG00000068413) hbs1l (ENSCARG00000068149) SGK1 (ENSCARG00000068040) slc2a12 (ENSCARG00000068022) tbpl1 (ENSCARG00000068013) tcf21 (ENSCARG00000068010) eya4 (ENSCARG00000067829) rps12 (ENSCARG00000067795) ENSCARG00000067785 sh3bgrl2 (ENSCARG00000067782) LCA5 (ENSCARG00000067777) hmgn3 (ENSCARG00000067769) PHIP (ENSCARG00000065312) ##22 irak1bp1 (ENSCARG00000065091) ENSCARG00000065082 PAN2 (ENSCARG00000065068) plagx (ENSCARG00000065064) trappc6b (ENSCARG00000065036) tpx2 (ENSCARG00000064798) ENSCARG00000064758 cd63 (ENSCARG00000064740) letmd1 (ENSCARG00000064725) zgc:56699 (ENSCARG00000064713) taf8 (ENSCARG00000064697) ENSCARG00000064687 PLXNA2 (ENSCARG00000063204) si:ch211-226m16.2 (ENSCARG00000063109) slc48a1a (ENSCARG00000063092) Cyprininae_a ANCESTRAL SPECIES 17 ENSGT00940000156248.a ENSGT00940000156274.l ENSGT00940000156799.b ENSGT00940000155726.lb ENSGT00940000159614.b ENSGT00940000155712.j ENSGT00940000160174.g ENSGT00950000182978.A.a.a.d ENSGT00390000018318.r.a ENSGT00940000165353.b ENSGT00390000018318.q ENSGT00940000165353.a.a ENSGT00940000159157 ENSGT00560000077266.a.b ENSGT01040000240523.b ENSGT00950000183107.a.a.e ##22 ENSGT00530000065281.b ENSGT00390000012588.b ENSGT00940000155566.q.a ENSGT00940000164803.c.b ENSGT00950000183117.b.uc ENSGT00950000182982.B.c.b.b.b ENSGT00940000158762.f.a ENSGT00390000013839.c.b.a ENSGT00400000022086.b.a.b.a ENSGT01070000253766.B.f.b.y ENSGT00940000161936.j ENSGT00940000156364.a.b.a ENSGT00950000183032.A.b.b.b.a.b.a.b ENSGT00520000055578.a.a.c.pb ENSGT01000000220342 Common carp reference MODERN SPECIES 11 nemp1 (ENSCCRG00000019198) armc1l (ENSCCRG00000019182) mtfr2 (ENSCCRG00000058959) myb (ENSCCRG00000020356) hbs1l (ENSCCRG00000020471) SGK1 (ENSCCRG00000079086) slc2a12 (ENSCCRG00000080141) tbpl1 (ENSCCRG00000040300) tcf21 (ENSCCRG00000030372) eya4 (ENSCCRG00000080888) ENSCCRG00000071892 ENSCCRG00000073713 sh3bgrl2 (ENSCCRG00000080260) LCA5 (ENSCCRG00000040596) hmgn3 (ENSCCRG00000040603) PHIP (ENSCCRG00000070368) ##22 ENSCCRG00000024489 irak1bp1 (ENSCCRG00000024498) tbx18 (ENSCCRG00000012143) ENSCCRG00000012140 selenoi (ENSCCRG00000068941) ENSCCRG00000049937 ENSCCRG00000066600 ENSCCRG00000049506 ENSCCRG00000049502 xkr7a (ENSCCRG00000049500) ENSCCRG00000011154 ENSCCRG00000011106 pcmtd2a (ENSCCRG00000011100) asxl1 (ENSCCRG00000069600) ENSCCRG00000062326 Golden-line barbel MODERN SPECIES 360 armc1l (ENSSGRG00000024651) mtfr2 (ENSSGRG00000024652) myb (ENSSGRG00000024657) hbs1l (ENSSGRG00000024720) ENSSGRG00000024731 aldh8a1 (ENSSGRG00000024732) SGK1 (ENSSGRG00000024771) slc2a12 (ENSSGRG00000025494) tbpl1 (ENSSGRG00000025495) tcf21 (ENSSGRG00000025497) eya4 (ENSSGRG00000025498) rps12 (ENSSGRG00000025500) ENSSGRG00000025503 sh3bgrl2 (ENSSGRG00000025504) LCA5 (ENSSGRG00000025505) PHIP (ENSSGRG00000025506) ##22 ENSSGRG00000025508 irak1bp1 (ENSSGRG00000025509) tbx18 (ENSSGRG00000025510) selenoi (ENSSGRG00000025526) ENSSGRG00000025798 ADRM1 (ENSSGRG00000026955) ENSSGRG00000027012 Cyprininae ANCESTRAL SPECIES 3 ENSGT00940000164948.c ENSGT00950000183215.c.a.a.i ENSGT00940000156248.b ENSGT01080000257573 ENSGT00940000156274.k ENSGT00940000156799.a ENSGT00940000155726.mb ENSGT00940000159614.a ENSGT00940000155712.i ENSGT00940000160174.h ENSGT00950000182978.A.a.a.c ENSGT00390000018318.r.b ENSGT00940000171557 ENSGT00560000077266.a.a ENSGT01040000240523.b ENSGT00950000183107.a.a.f ##22 ENSGT00530000065281.a ENSGT00390000012588.a ENSGT00940000155566.q.b ENSGT00940000164803.c.a ENSGT00950000183117.b.tc ENSGT00950000182982.B.c.b.b.a ENSGT00940000158762.f.b ENSGT00390000013839.c.b.b ENSGT00400000022086.b.a.b.b ENSGT01070000253766.B.f.b.x ENSGT00940000160661.p ENSGT00940000161936.i ENSGT00940000156364.a.b.b ENSGT00950000183032.A.b.b.b.a.b.a.a ENSGT00520000055578.a.a.c.qb Goldfish MODERN SPECIES 15 armc1l (ENSCARG00000010420) mtfr2 (ENSCARG00000010434) myb (ENSCARG00000010454) hbs1l (ENSCARG00000010519) aldh8a1 (ENSCARG00000010610) SGK1 (ENSCARG00000010682) slc2a12 (ENSCARG00000011181) tbpl1 (ENSCARG00000011184) tcf21 (ENSCARG00000011195) eya4 (ENSCARG00000011229) rps12 (ENSCARG00000011495) ENSCARG00000011505 sh3bgrl2 (ENSCARG00000011512) LCA5 (ENSCARG00000011520) hmgn3 (ENSCARG00000011525) PHIP (ENSCARG00000011722) ##22 ENSCARG00000018357 irak1bp1 (ENSCARG00000018362) tbx18 (ENSCARG00000018377) ENSCARG00000018403 selenoi (ENSCARG00000018412) ENSCARG00000018463 ENSCARG00000018478 ADRM1 (ENSCARG00000018513) CABLES2 (ENSCARG00000018589) xkr7a (ENSCARG00000018598) OPRL1 (ENSCARG00000018604) ENSCARG00000018609 MYT1 (ENSCARG00000018633) pcmtd2a (ENSCARG00000018755) asxl1 (ENSCARG00000018762) Cyprininae_a ANCESTRAL SPECIES 5 ENSGT00940000164948.c ENSGT00950000183215.c.a.a.i ENSGT00940000156248.b ENSGT01080000257573 ENSGT00940000156274.k ENSGT00940000156799.a ENSGT00940000155726.mb ENSGT00940000159614.a ENSGT00940000155712.i ENSGT00940000160174.h ENSGT00950000182978.A.a.a.c ENSGT00390000018318.r.b ENSGT00940000171557 ENSGT00560000077266.a.a ENSGT01040000240523.a ENSGT00950000183107.a.a.f ##22 ENSGT00530000065281.a ENSGT00390000012588.a ENSGT00940000155566.q.b ENSGT00940000164803.c.a ENSGT00950000183117.b.tc ENSGT00950000182982.B.c.b.b.a ENSGT00940000158762.f.b ENSGT00390000013839.c.b.b ENSGT00400000022086.b.a.b.b ENSGT01070000253766.B.f.b.x ENSGT00940000160661.p ENSGT00940000161936.i ENSGT00940000156364.a.b.b ENSGT00950000183032.A.b.b.b.a.b.a.a ENSGT00520000055578.a.a.c.qb Common carp reference MODERN SPECIES 49 mtfr2 (ENSCCRG00000020571) myb (ENSCCRG00000020380) hbs1l (ENSCCRG00000020307) ENSCCRG00000066331 aldh8a1 (ENSCCRG00000054313) SGK1 (ENSCCRG00000067866) slc2a12 (ENSCCRG00000072681) tcf21 (ENSCCRG00000047148) tbpl1 (ENSCCRG00000047143) eya4 (ENSCCRG00000040327) rps12 (ENSCCRG00000017560) ENSCCRG00000075555 sh3bgrl2 (ENSCCRG00000053387) LCA5 (ENSCCRG00000029592) hmgn3 (ENSCCRG00000046468) PHIP (ENSCCRG00000045237) ##22 irak1bp1 (ENSCCRG00000053627) tbx18 (ENSCCRG00000023742) ENSCCRG00000056557 selenoi (ENSCCRG00000035074) ENSCCRG00000012135 ENSCCRG00000011320 ENSCCRG00000072840 ENSCCRG00000011160 xkr7a (ENSCCRG00000011158) ENSCCRG00000044904 ENSCCRG00000044899 ENSCCRG00000044840 pcmtd2a (ENSCCRG00000044792) asxl1 (ENSCCRG00000053420) thap3 (ENSCCRG00000074074) Golden-line barbel MODERN SPECIES 28 mtfr2 (ENSSGRG00000025452) myb (ENSSGRG00000025449) ENSSGRG00000025443 ENSSGRG00000025441 SGK1 (ENSSGRG00000024550) slc2a12 (ENSSGRG00000024533) tbpl1 (ENSSGRG00000024531) tbpl1 (ENSSGRG00000024530) tcf21 (ENSSGRG00000024529) eya4 (ENSSGRG00000024521) rps12 (ENSSGRG00000024518) zgc:153284 (ENSSGRG00000024517) sh3bgrl2 (ENSSGRG00000024514) LCA5 (ENSSGRG00000024512) ENSSGRG00000024510 PHIP (ENSSGRG00000023046) ##22 ENSSGRG00000022993 irak1bp1 (ENSSGRG00000022992) tbx18 (ENSSGRG00000022991) ENSSGRG00000022989 selenoi (ENSSGRG00000022890) ENSSGRG00000022882 ENSSGRG00000022880 ENSSGRG00000022101 ADRM1 (ENSSGRG00000022073) ENSSGRG00000022072 xkr7a (ENSSGRG00000022070) OPRL1 (ENSSGRG00000022064) ENSSGRG00000022057 MYT1 (ENSSGRG00000022055) ENSSGRG00000022053 Zebrafish MODERN SPECIES 15 mtfr2 (ENSDARG00000060394) myb (ENSDARG00000053666) hbs1l (ENSDARG00000036778) aldh8a1 (ENSDARG00000036776) sgk1 (ENSDARG00000025522) slc2a12 (ENSDARG00000036865) tbpl1 (ENSDARG00000036868) tcf21 (ENSDARG00000036869) eya4 (ENSDARG00000012397) rps12 (ENSDARG00000036875) zgc:153284 (ENSDARG00000036876) sh3bgrl2 (ENSDARG00000036878) ENSDARG00000094050 LCA5 (ENSDARG00000076153) hmgn3 (ENSDARG00000036754) PHIP (ENSDARG00000015970) ##22 ENSDARG00000094345 irak1bp1 (ENSDARG00000036903) tbx18 (ENSDARG00000036930) ENSDARG00000086679 selenoi (ENSDARG00000060484) ENSDARG00000078244 ENSDARG00000053804 CABLES2 (ENSDARG00000076964) xkr7a (ENSDARG00000036952) NPBWR2 (ENSDARG00000079423) MYT1 (ENSDARG00000074030) pcmtd2a (ENSDARG00000053820) asxl1 (ENSDARG00000036956) thap3 (ENSDARG00000041080) dnajc11a (ENSDARG00000011196) Characiphysae ANCESTRAL SPECIES 159 ENSGT00950000183215.c.a.a ENSGT00940000156248 ENSGT00940000156274 ENSGT00940000156799 ENSGT00940000155726 ENSGT00940000159614 ENSGT00940000155712 ENSGT00940000160174 ENSGT00950000182978.A.a.a ENSGT00390000018318 ENSGT00940000166598 ENSGT00940000157260.t ENSGT00940000159157 ENSGT00560000077266.a ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 Characiphysae_b ANCESTRAL SPECIES 35 ENSGT00940000164948 ENSGT00950000183215.c.a.a ENSGT00940000156248 ENSGT00940000156274 ENSGT00940000156799 ENSGT00940000155726 ENSGT00940000159614 ENSGT00940000155712 ENSGT00940000160174 ENSGT00950000182978.A.a.a ENSGT00390000018318 ENSGT00940000165353 ENSGT00940000159157 ENSGT00560000077266.a ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00940000155687.e.b ENSGT00950000182837.b.a.a.c ENSGT00940000158666.a.a ENSGT00940000161404 ENSGT00940000154256.`c ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000156263.i ENSGT00950000183290.b ENSGT00940000165418 Electric eel MODERN SPECIES 135 ube2d1b (ENSEEEG00000001966) tfam (ENSEEEG00000001963) zgc:171971 (ENSEEEG00000001961) ENSEEEG00000001960 phyhiplb (ENSEEEG00000001955) FAM13C (ENSEEEG00000001947) slc16a9b (ENSEEEG00000001945) ccdc6b (ENSEEEG00000001943) ANK3 (ENSEEEG00000000674) RHOBTB1 (ENSEEEG00000000175) ENSEEEG00000000156 cabcoco1 (ENSEEEG00000000141) ENSEEEG00000000129 LCA5 (ENSEEEG00000000112) hmgn3 (ENSEEEG00000000095) PHIP (ENSEEEG00000023697) ##22 ENSEEEG00000023649 irak1bp1 (ENSEEEG00000023647) Characoidei ANCESTRAL SPECIES 22 ENSGT00940000164948 ENSGT00950000183215.c.a.a ENSGT00940000156248 ENSGT00940000156274 ENSGT00940000156799 ENSGT00940000155726 ENSGT00940000159614 ENSGT00940000155712 ENSGT00940000160174 ENSGT00950000182978.A.a.a ENSGT00390000018318 ENSGT00940000165353 ENSGT00940000159157 ENSGT00560000077266.a ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00940000155687.e.b ENSGT00950000182837.b.a.a.c ENSGT00940000158666.a.a ENSGT00940000161404 ENSGT00940000154256.`c ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000156263.i ENSGT00950000183290.b ENSGT00940000165418 Mexicana tetra MODERN SPECIES 6 ENSAMXG00000041004 ormdl2 (ENSAMXG00000034523) nemp1 (ENSAMXG00000035957) nemp1 (ENSAMXG00000005407) ENSAMXG00000005394 armc1l (ENSAMXG00000004220) mtfr2 (ENSAMXG00000004238) myb (ENSAMXG00000004244) hbs1l (ENSAMXG00000004260) eya4 (ENSAMXG00000004355) rps12 (ENSAMXG00000035998) ENSAMXG00000039895 sh3bgrl2 (ENSAMXG00000037764) LCA5 (ENSAMXG00000039992) hmgn3 (ENSAMXG00000004392) PHIP (ENSAMXG00000004407) ##22 ENSAMXG00000039347 irak1bp1 (ENSAMXG00000042727) ENSAMXG00000031393 tbx18 (ENSAMXG00000036788) ENSAMXG00000004435 ADCY6 (ENSAMXG00000004455) CACNB3 (ENSAMXG00000004503) rnd1b (ENSAMXG00000019017) dtx3 (ENSAMXG00000029886) ptges3a (ENSAMXG00000004536) mipa (ENSAMXG00000034729) stat6 (ENSAMXG00000040035) FIGNL2 (ENSAMXG00000025605) scn8aa (ENSAMXG00000004617) ENSAMXG00000004667 Red-bellied piranha DUPLICATION Red-bellied piranha MODERN SPECIES 5 nemp1 (ENSPNAG00000026898) ENSPNAG00000026882 myb (ENSPNAG00000026845) hbs1l (ENSPNAG00000026721) aldh8a1 (ENSPNAG00000026541) SGK1 (ENSPNAG00000026507) slc2a12 (ENSPNAG00000026490) tbpl1 (ENSPNAG00000026480) tcf21 (ENSPNAG00000026466) eya4 (ENSPNAG00000026443) rps12 (ENSPNAG00000026298) ENSPNAG00000004033 sh3bgrl2 (ENSPNAG00000026229) LCA5 (ENSPNAG00000026203) hmgn3 (ENSPNAG00000026146) PHIP (ENSPNAG00000026124) ##22 ENSPNAG00000025854 irak1bp1 (ENSPNAG00000025841) tbx18 (ENSPNAG00000005640) ENSPNAG00000025802 ADCY6 (ENSPNAG00000006362) ENSPNAG00000025634 CACNB3 (ENSPNAG00000025621) rnd1b (ENSPNAG00000025583) dtx3 (ENSPNAG00000025560) ptges3a (ENSPNAG00000003930) mipa (ENSPNAG00000025525) stat6 (ENSPNAG00000005198) FIGNL2 (ENSPNAG00000025378) scn8aa (ENSPNAG00000025349) ENSPNAG00000025084 Red-bellied piranha MODERN SPECIES 443 rpl36a (ENSPNAG00000008320) glra4b (ENSPNAG00000000879) aifm1 (ENSPNAG00000008292) tnfsf10l4 (ENSPNAG00000000804) nono (ENSPNAG00000008232) zgc:113208 (ENSPNAG00000008219) mtnr1c (ENSPNAG00000008208) vma21 (ENSPNAG00000000774) npas2 (ENSPNAG00000000764) ENSPNAG00000000744 apool (ENSPNAG00000008161) #11 ENSPNAG00000008148 ENSPNAG00000008124 ENSPNAG00000000689 ENSPNAG00000000684 #22 ENSPNAG00000000678 ##22 Channel catfish DUPLICATION Channel catfish MODERN SPECIES 6 armc1l (ENSIPUG00000010926) mtfr2 (ENSIPUG00000010892) myb (ENSIPUG00000010846) hbs1l (ENSIPUG00000010748) aldh8a1 (ENSIPUG00000010718) SGK1 (ENSIPUG00000010684) slc2a12 (ENSIPUG00000010652) tbpl1 (ENSIPUG00000010601) tcf21 (ENSIPUG00000010589) eya4 (ENSIPUG00000010471) rps12 (ENSIPUG00000010390) zgc:153284 (ENSIPUG00000010347) sh3bgrl2 (ENSIPUG00000010327) lca5 (ENSIPUG00000010297) hmgn3 (ENSIPUG00000010282) phip (ENSIPUG00000010181) ##22 ENSIPUG00000010135 irak1bp1 (ENSIPUG00000010077) TBX18 (ENSIPUG00000010035) ENSIPUG00000009990 ENSIPUG00000009974 dffa (ENSIPUG00000009954) masp2 (ENSIPUG00000009934) gas8 (ENSIPUG00000009892) cort (ENSIPUG00000009885) srm (ENSIPUG00000009846) smc1a (ENSIPUG00000009796) ribc1 (ENSIPUG00000009783) l1cam (ENSIPUG00000009533) HUWE1 (ENSIPUG00000009052) tmem107 (ENSIPUG00000008961) Channel catfish MODERN SPECIES 12 ech1 (ENSIPUG00000007967) ENSIPUG00000007995 meis3 (ENSIPUG00000008024) ENSIPUG00000008083 sirt2 (ENSIPUG00000008099) atp5sl (ENSIPUG00000008114) GJD2 (ENSIPUG00000008127) nop53 (ENSIPUG00000008154) ATM (ENSIPUG00000008217) bace2 (ENSIPUG00000008381) DSCAM (ENSIPUG00000008441) PCP4 (ENSIPUG00000008528) ENSIPUG00000008537 sh3bgr (ENSIPUG00000008561) get1 (ENSIPUG00000008677) ENSIPUG00000008688 ##22 rbp2a (ENSIPUG00000008698) Mrps22 (ENSIPUG00000008729) Foxl2 (ENSIPUG00000008752) rps28 (ENSIPUG00000008759) ENSIPUG00000008815 MED26 (ENSIPUG00000008821) ENSIPUG00000008830 trnau1apb (ENSIPUG00000008843) ENSIPUG00000008907 cdyl (ENSIPUG00000008921) RPP40 (ENSIPUG00000008951) fitm1 (ENSIPUG00000008979) mrpl34 (ENSIPUG00000008989) myh7l (ENSIPUG00000009014) ENSIPUG00000009123 Euteleosteomorpha ANCESTRAL SPECIES 92 ENSGT00940000174827 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 ENSGT00490000043329.a.b.g.b ENSGT01030000234527.A.a.a.b.b ENSGT00940000155459.x.a ENSGT00940000153897.b.b ENSGT00940000153739.a.b.s ENSGT00940000156975 ENSGT00530000063834.e.b Acanthomorphata ANCESTRAL SPECIES 35 ENSGT00940000174827 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b Cod MODERN SPECIES 13 ENSGMOG00000011037 ENSGMOG00000029007 ENSGMOG00000025664 KLHL29 (ENSGMOG00000010550) ATAD2B (ENSGMOG00000010535) UBXN2A (ENSGMOG00000010528) mfsd2b (ENSGMOG00000010514) wdcp (ENSGMOG00000029245) ENSGMOG00000010510 mmut (ENSGMOG00000010495) opn8b (ENSGMOG00000010487) opn8a (ENSGMOG00000010479) runx2b (ENSGMOG00000010468) clic5b (ENSGMOG00000010458) ENSGMOG00000010449 ENSGMOG00000010420 ##22 ENSGMOG00000034743 irak1bp1 (ENSGMOG00000035861) tbx18 (ENSGMOG00000003658) ENSGMOG00000030032 selenoi (ENSGMOG00000003525) ENSGMOG00000024342 ENSGMOG00000003475 ENSGMOG00000010209 ENSGMOG00000035027 ENSGMOG00000010181 ENSGMOG00000026232 ENSGMOG00000019372 rps12 (ENSGMOG00000019455) eya4 (ENSGMOG00000019458) ENSGMOG00000025266 Euacanthomorphacea ANCESTRAL SPECIES 13 ENSGT00940000174827 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 Pinecone sodierfish MODERN SPECIES 16 GZF1 (ENSMMDG00005018932) TRIB2 (ENSMMDG00005018929) KLHL29 (ENSMMDG00005018904) ATAD2B (ENSMMDG00005017643) UBXN2A (ENSMMDG00005017632) ENSMMDG00005017630 ENSMMDG00005017629 wdcp (ENSMMDG00005017626) fkbp1b (ENSMMDG00005017625) mmut (ENSMMDG00005017103) opn8b (ENSMMDG00005017084) runx2b (ENSMMDG00005016928) clic5b (ENSMMDG00005016910) enpp5 (ENSMMDG00005016907) hmgn3 (ENSMMDG00005016906) PHIP (ENSMMDG00005016896) ##22 ENSMMDG00005016887 irak1bp1 (ENSMMDG00005016884) tbx18 (ENSMMDG00005016883) ENSMMDG00005016878 selenoi (ENSMMDG00005016859) ost4 (ENSMMDG00005016857) agbl5 (ENSMMDG00005016852) papola (ENSMMDG00005012562) ENSMMDG00005012504 CCNK (ENSMMDG00005012501) ccdc85cb (ENSMMDG00005012500) ENSMMDG00005011533 ENSMMDG00005011513 ENSMMDG00005011408 ENSMMDG00005011269 Percomorphaceae ANCESTRAL SPECIES 14 ENSGT00940000174827 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b Tiger tail seahorse MODERN SPECIES 486 TRIB2 (ENSHCOG00000004299) KLHL29 (ENSHCOG00000004293) ATAD2B (ENSHCOG00000004261) UBXN2A (ENSHCOG00000004166) mfsd2b (ENSHCOG00000004154) irak1bp1 (ENSHCOG00000004023) ENSHCOG00000004008 wdcp (ENSHCOG00000003999) fkbp1b (ENSHCOG00000003996) mmut (ENSHCOG00000003988) opn8b (ENSHCOG00000003959) runx2b (ENSHCOG00000003940) clic5b (ENSHCOG00000003906) enpp5 (ENSHCOG00000003892) ENSHCOG00000003884 PHIP (ENSHCOG00000003867) ##22 tbx18 (ENSHCOG00000003636) ENSHCOG00000000107 Percomorphaceae_B ANCESTRAL SPECIES 18 ENSGT00940000174827 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b Percomorphaceae_C ANCESTRAL SPECIES 19 ENSGT00940000174827 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 Percomorphaceae_D ANCESTRAL SPECIES 18 ENSGT00940000174827 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 Carangaria ANCESTRAL SPECIES 18 ENSGT00940000174827 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b Carangaria_A ANCESTRAL SPECIES 13 ENSGT00940000174827 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 Seriola ANCESTRAL SPECIES 4 ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 Yellowtail amberjack MODERN SPECIES 3189 GZF1 (ENSSLDG00000002382) TRIB2 (ENSSLDG00000002400) KLHL29 (ENSSLDG00000002435) ATAD2B (ENSSLDG00000002518) UBXN2A (ENSSLDG00000002630) mfsd2b (ENSSLDG00000002639) wdcp (ENSSLDG00000002657) fkbp1b (ENSSLDG00000002672) mmut (ENSSLDG00000002692) opn8b (ENSSLDG00000002752) opn8a (ENSSLDG00000002770) runx2b (ENSSLDG00000002794) clic5b (ENSSLDG00000002832) enpp5 (ENSSLDG00000002864) hmgn3 (ENSSLDG00000002874) PHIP (ENSSLDG00000002911) ##22 ENSSLDG00000002938 irak1bp1 (ENSSLDG00000002964) tbx18 (ENSSLDG00000002976) ENSSLDG00000003062 selenoi (ENSSLDG00000003099) ENSSLDG00000003166 agbl5 (ENSSLDG00000003186) ENSSLDG00000003220 ccnk (ENSSLDG00000003240) ccdc85cb (ENSSLDG00000003255) cyp46a1.4 (ENSSLDG00000003281) ism2b (ENSSLDG00000003364) sptlc2b (ENSSLDG00000003376) snw1 (ENSSLDG00000003409) nrxn3b (ENSSLDG00000003463) Greater amberjack MODERN SPECIES 10 GZF1 (ENSSDUG00000008186) TRIB2 (ENSSDUG00000008177) KLHL29 (ENSSDUG00000008128) ATAD2B (ENSSDUG00000008090) UBXN2A (ENSSDUG00000008080) mfsd2b (ENSSDUG00000007864) wdcp (ENSSDUG00000007832) fkbp1b (ENSSDUG00000007825) mmut (ENSSDUG00000007776) opn8b (ENSSDUG00000007755) opn8a (ENSSDUG00000007746) runx2b (ENSSDUG00000007728) clic5b (ENSSDUG00000007707) enpp5 (ENSSDUG00000007699) hmgn3 (ENSSDUG00000007691) PHIP (ENSSDUG00000007669) ##22 ENSSDUG00000007650 irak1bp1 (ENSSDUG00000007634) tbx18 (ENSSDUG00000007613) ENSSDUG00000007591 selenoi (ENSSDUG00000007564) ost4 (ENSSDUG00000007556) agbl5 (ENSSDUG00000007519) ENSSDUG00000007457 CCNK (ENSSDUG00000007413) ccdc85cb (ENSSDUG00000007379) cyp46a1.4 (ENSSDUG00000007344) ism2b (ENSSDUG00000007328) sptlc2b (ENSSDUG00000007318) snw1 (ENSSDUG00000007267) ENSSDUG00000007259 Barramundi perch MODERN SPECIES 265 mmut (ENSLCAG00010010803) opn8b (ENSLCAG00010010800) opn8a (ENSLCAG00010010797) runx2b (ENSLCAG00010010787) clic5b (ENSLCAG00010010771) enpp5 (ENSLCAG00010010763) PHIP (ENSLCAG00010010446) ##22 ENSLCAG00010010370 irak1bp1 (ENSLCAG00010010367) tbx18 (ENSLCAG00010010366) ENSLCAG00010010360 selenoi (ENSLCAG00010010344) ost4 (ENSLCAG00010010334) agbl5 (ENSLCAG00010010325) papola (ENSLCAG00010010297) ENSLCAG00010010287 CCNK (ENSLCAG00010010282) ccdc85cb (ENSLCAG00010010277) cyp46a1.4 (ENSLCAG00010010231) ism2b (ENSLCAG00010010211) sptlc2b (ENSLCAG00010010207) snw1 (ENSLCAG00010010110) Pleuronectoidei ANCESTRAL SPECIES 11 ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 Turbot MODERN SPECIES 12 ENSSMAG00000005105 ENSSMAG00000005082 ENSSMAG00000025873 KLHL29 (ENSSMAG00000005058) ATAD2B (ENSSMAG00000005022) UBXN2A (ENSSMAG00000005010) mfsd2b (ENSSMAG00000004962) wdcp (ENSSMAG00000005005) fkbp1b (ENSSMAG00000023449) mmut (ENSSMAG00000004926) opn8b (ENSSMAG00000004919) runx2b (ENSSMAG00000004904) clic5b (ENSSMAG00000004898) ENSSMAG00000004890 hmgn3 (ENSSMAG00000032298) ENSSMAG00000004786 ##22 ENSSMAG00000004764 irak1bp1 (ENSSMAG00000004750) ENSSMAG00000004746 tbx18 (ENSSMAG00000004709) ENSSMAG00000004690 ENSSMAG00000004602 ENSSMAG00000022034 ENSSMAG00000004566 ENSSMAG00000004512 ENSSMAG00000004495 ENSSMAG00000004490 ENSSMAG00000031800 ENSSMAG00000004473 ENSSMAG00000028801 ENSSMAG00000004463 Tongue sole MODERN SPECIES 17 GZF1 (ENSCSEG00000002270) TRIB2 (ENSCSEG00000002274) KLHL29 (ENSCSEG00000002292) ATAD2B (ENSCSEG00000002360) UBXN2A (ENSCSEG00000002412) mfsd2b (ENSCSEG00000002421) wdcp (ENSCSEG00000002436) fkbp1b (ENSCSEG00000002439) mmut (ENSCSEG00000002441) opn8b (ENSCSEG00000002447) opn8a (ENSCSEG00000002450) runx2b (ENSCSEG00000002454) clic5b (ENSCSEG00000002473) enpp5 (ENSCSEG00000002478) hmgn3 (ENSCSEG00000002482) PHIP (ENSCSEG00000002495) ##22 ENSCSEG00000002515 irak1bp1 (ENSCSEG00000002519) tbx18 (ENSCSEG00000002523) ENSCSEG00000002529 esrrgb (ENSCSEG00000002536) si:ch73-21k16.4 (ENSCSEG00000002545) LPIN1 (ENSCSEG00000002548) ENSCSEG00000002557 itsn2a (ENSCSEG00000002594) DDX1 (ENSCSEG00000002630) nbas (ENSCSEG00000002658) ENSCSEG00000002682 lratd1 (ENSCSEG00000002687) MTLN (ENSCSEG00000002691) sec63 (ENSCSEG00000002702) Anabantaria ANCESTRAL SPECIES 20 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 Anabantoidei ANCESTRAL SPECIES 15 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000182802.C ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000167479 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 ENSGT00960000186709 Climbing perch MODERN SPECIES 15 ENSATEG00000018374 ENSATEG00000029882 KLHL29 (ENSATEG00000018305) ATAD2B (ENSATEG00000018272) UBXN2A (ENSATEG00000018258) mfsd2b (ENSATEG00000018249) wdcp (ENSATEG00000018239) fkbp1b (ENSATEG00000029890) mmut (ENSATEG00000018189) opn8b (ENSATEG00000018174) opn8a (ENSATEG00000018158) runx2b (ENSATEG00000018115) clic5b (ENSATEG00000026446) ENSATEG00000029258 hmgn3 (ENSATEG00000027613) ENSATEG00000017973 ##22 ENSATEG00000017940 irak1bp1 (ENSATEG00000017930) tbx18 (ENSATEG00000029420) ENSATEG00000017898 selenoi (ENSATEG00000017863) ENSATEG00000017855 ENSATEG00000017801 ENSATEG00000027078 CCNK (ENSATEG00000029743) ccdc85cb (ENSATEG00000026812) cyp46a1.4 (ENSATEG00000017653) ism2b (ENSATEG00000029406) sptlc2b (ENSATEG00000017613) snw1 (ENSATEG00000017554) ENSATEG00000028902 Siamese fighting fish MODERN SPECIES 13 ENSBSLG00000011164 GZF1 (ENSBSLG00000011154) TRIB2 (ENSBSLG00000011146) KLHL29 (ENSBSLG00000011107) ATAD2B (ENSBSLG00000010736) UBXN2A (ENSBSLG00000010454) mfsd2b (ENSBSLG00000010324) wdcp (ENSBSLG00000010314) fkbp1b (ENSBSLG00000010308) mmut (ENSBSLG00000010161) opn8b (ENSBSLG00000010153) runx2b (ENSBSLG00000009843) clic5b (ENSBSLG00000009747) enpp5 (ENSBSLG00000009725) HMGN3 (ENSBSLG00000009683) PHIP (ENSBSLG00000007089) ##22 ENSBSLG00000006930 irak1bp1 (ENSBSLG00000006916) tbx18 (ENSBSLG00000006902) ENSBSLG00000006868 selenoi (ENSBSLG00000006806) ost4 (ENSBSLG00000006787) agbl5 (ENSBSLG00000006680) ENSBSLG00000006593 CCNK (ENSBSLG00000006495) ccdc85cb (ENSBSLG00000006370) cyp46a1.4 (ENSBSLG00000006064) ism2b (ENSBSLG00000006041) sptlc2b (ENSBSLG00000005400) snw1 (ENSBSLG00000004988) ENSBSLG00000004936 Zig-zag eel MODERN SPECIES 16 ENSMAMG00000011931 ENSMAMG00000024624 KLHL29 (ENSMAMG00000011874) ATAD2B (ENSMAMG00000011848) UBXN2A (ENSMAMG00000011827) mfsd2b (ENSMAMG00000011812) wdcp (ENSMAMG00000011801) fkbp1b (ENSMAMG00000010624) mmut (ENSMAMG00000010584) opn8b (ENSMAMG00000026237) opn8a (ENSMAMG00000010570) runx2b (ENSMAMG00000010543) clic5b (ENSMAMG00000010515) ENSMAMG00000010509 hmgn3 (ENSMAMG00000010500) ENSMAMG00000010479 ##22 ENSMAMG00000010460 irak1bp1 (ENSMAMG00000025072) tbx18 (ENSMAMG00000010438) ENSMAMG00000010429 selenoi (ENSMAMG00000010401) ENSMAMG00000010391 ENSMAMG00000010376 ENSMAMG00000010352 ENSMAMG00000010333 ENSMAMG00000010286 ccdc85cb (ENSMAMG00000010274) ENSMAMG00000009630 ENSMAMG00000025520 ENSMAMG00000009573 ENSMAMG00000025161 Eupercaria ANCESTRAL SPECIES 16 ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000168779 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b Tetraodontidae ANCESTRAL SPECIES 15 ENSGT00390000005826.a.b.h.b ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000167479 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 ENSGT00960000186709 Tetraodon MODERN SPECIES 5 NAPB (ENSTNIG00000010723) GZF1 (ENSTNIG00000010722) TRIB2 (ENSTNIG00000010721) KLHL29 (ENSTNIG00000010720) ATAD2B (ENSTNIG00000010719) UBXN2A (ENSTNIG00000003595) mfsd2b (ENSTNIG00000009679) wdcp (ENSTNIG00000009680) fkbp1b (ENSTNIG00000009681) mmut (ENSTNIG00000009682) opn8a (ENSTNIG00000009683) opn8a (ENSTNIG00000009684) runx2b (ENSTNIG00000009685) clic5b (ENSTNIG00000009686) enpp5 (ENSTNIG00000009687) PHIP (ENSTNIG00000009688) ##22 ENSTNIG00000009689 irak1bp1 (ENSTNIG00000000224) tbx18 (ENSTNIG00000009690) selenoi (ENSTNIG00000009691) agbl5 (ENSTNIG00000009692) ENSTNIG00000009693 CCNK (ENSTNIG00000009694) ccdc85cb (ENSTNIG00000009695) cyp46a1.4 (ENSTNIG00000009696) ism2b (ENSTNIG00000009697) sptlc2b (ENSTNIG00000009698) snw1 (ENSTNIG00000009699) nrxn3b (ENSTNIG00000009700) tshr (ENSTNIG00000009701) gtf2a1 (ENSTNIG00000009702) Fugu MODERN SPECIES 7 NAPB (ENSTRUG00000006238) ENSTRUG00000006128 TRIB2 (ENSTRUG00000022756) KLHL29 (ENSTRUG00000005866) ATAD2B (ENSTRUG00000005641) UBXN2A (ENSTRUG00000005531) mfsd2b (ENSTRUG00000005054) wdcp (ENSTRUG00000004936) fkbp1b (ENSTRUG00000004717) mmut (ENSTRUG00000004300) opn8b (ENSTRUG00000004187) opn8a (ENSTRUG00000004110) runx2 (ENSTRUG00000003501) clic5b (ENSTRUG00000000491) enpp5 (ENSTRUG00000000539) PHIP (ENSTRUG00000000577) ##22 ENSTRUG00000028633 irak1bp1 (ENSTRUG00000001337) tbx18 (ENSTRUG00000001419) ENSTRUG00000025715 selenoi (ENSTRUG00000020550) ost4 (ENSTRUG00000019535) agbl5 (ENSTRUG00000018079) ENSTRUG00000018074 CCNK (ENSTRUG00000025093) ccdc85cb (ENSTRUG00000000078) cyp46a1.4 (ENSTRUG00000022490) ism2b (ENSTRUG00000024496) sptlc2b (ENSTRUG00000018026) snw1 (ENSTRUG00000018015) ENSTRUG00000032285 Eupecaria_A ANCESTRAL SPECIES 16 ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000168779 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 57 enpp5 (ENSLBEG00000007165) hmgn3 (ENSLBEG00000007130) ENSLBEG00000007104 PHIP (ENSLBEG00000006984) ##22 ENSLBEG00000006951 irak1bp1 (ENSLBEG00000006937) tbx18 (ENSLBEG00000006898) ENSLBEG00000006882 selenoi (ENSLBEG00000006836) ost4 (ENSLBEG00000006819) agbl5 (ENSLBEG00000006727) ENSLBEG00000006559 ENSLBEG00000006505 ccnk (ENSLBEG00000006428) ENSLBEG00000006400 ccdc85cb (ENSLBEG00000006348) cyp46a1.4 (ENSLBEG00000006271) ism2b (ENSLBEG00000006229) sptlc2b (ENSLBEG00000006167) Ballan wrasse MODERN SPECIES 4526 ENSLBEG00000028968 ##22 ENSLBEG00000028969 #22 Eupecaria_B ANCESTRAL SPECIES 16 ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000168779 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b Eupecaria_C ANCESTRAL SPECIES 16 ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000168779 ENSGT00940000167479 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 Eupercaria_incertae_sedis ANCESTRAL SPECIES 11 ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000168779 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b European seabass MODERN SPECIES 7 ENSDLAG00005022510 ENSDLAG00005022503 KLHL29 (ENSDLAG00005022456) ATAD2B (ENSDLAG00005022051) mfsd2b (ENSDLAG00005028660) wdcp (ENSDLAG00005022019) mmut (ENSDLAG00005021811) ENSDLAG00005018130 opn8b (ENSDLAG00005021801) opn8a (ENSDLAG00005021783) runx2b (ENSDLAG00005021669) clic5b (ENSDLAG00005021626) ENSDLAG00005021622 ENSDLAG00005021616 irak1bp1 (ENSDLAG00005021269) ENSDLAG00005021306 ##22 tbx18 (ENSDLAG00005021265) ENSDLAG00005033900 selenoi (ENSDLAG00005021213) ENSDLAG00005021208 ENSDLAG00005021182 ENSDLAG00005021174 ccnk (ENSDLAG00005021171) ccdc85cb (ENSDLAG00005021157) cyp46a1.4 (ENSDLAG00005020750) ism2b (ENSDLAG00005020718) sptlc2b (ENSDLAG00005020230) ENSDLAG00005019784 snw1 (ENSDLAG00005030862) nrxn3b (ENSDLAG00005016801) CEP128 (ENSDLAG00005016669) Large yellow croaker MODERN SPECIES 482 ENSLCRG00005005673 TRIB2 (ENSLCRG00005005674) KLHL29 (ENSLCRG00005005675) ATAD2B (ENSLCRG00005005835) UBXN2A (ENSLCRG00005007184) mfsd2b (ENSLCRG00005007186) wdcp (ENSLCRG00005007622) fkbp1b (ENSLCRG00005007623) mmut (ENSLCRG00005007629) opn8b (ENSLCRG00005007895) opn8a (ENSLCRG00005007901) runx2b (ENSLCRG00005007923) clic5b (ENSLCRG00005007946) enpp5 (ENSLCRG00005008011) hmgn3 (ENSLCRG00005008012) PHIP (ENSLCRG00005008029) ##22 ENSLCRG00005008495 irak1bp1 (ENSLCRG00005008498) ENSLCRG00005008500 tbx18 (ENSLCRG00005008502) selenoi (ENSLCRG00005008503) ost4 (ENSLCRG00005008533) agbl5 (ENSLCRG00005008535) ENSLCRG00005008544 ENSLCRG00005008547 CCNK (ENSLCRG00005008550) ccdc85cb (ENSLCRG00005008551) cyp46a1.4 (ENSLCRG00005008555) ism2b (ENSLCRG00005009086) sptlc2b (ENSLCRG00005009099) snw1 (ENSLCRG00005010250) Gilthead seabream MODERN SPECIES 14 NAPB (ENSSAUG00010004210) ENSSAUG00010004338 TRIB2 (ENSSAUG00010004343) KLHL29 (ENSSAUG00010004370) ATAD2B (ENSSAUG00010004960) UBXN2A (ENSSAUG00010005366) mfsd2b (ENSSAUG00010005393) wdcp (ENSSAUG00010006054) fkbp1b (ENSSAUG00010006055) mmut (ENSSAUG00010006067) opn8b (ENSSAUG00010006434) opn8a (ENSSAUG00010006435) runx2b (ENSSAUG00010006439) clic5b (ENSSAUG00010006444) enpp5 (ENSSAUG00010006555) PHIP (ENSSAUG00010006594) ##22 ENSSAUG00010008410 irak1bp1 (ENSSAUG00010008412) tbx18 (ENSSAUG00010008416) ENSSAUG00010008421 selenoi (ENSSAUG00010008426) ost4 (ENSSAUG00010008444) agbl5 (ENSSAUG00010008449) ENSSAUG00010008455 CCNK (ENSSAUG00010008457) ccdc85cb (ENSSAUG00010008474) cyp46a1.4 (ENSSAUG00010008481) ism2b (ENSSAUG00010009737) sptlc2b (ENSSAUG00010009754) snw1 (ENSSAUG00010010903) nrxn3b (ENSSAUG00010010932) Perciformes ANCESTRAL SPECIES 14 ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 Cottioidei ANCESTRAL SPECIES 23 ENSGT00390000005826.a.b.h.b ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT00950000183107.a.a ##22 ENSGT00940000156417.g.b ENSGT00940000164440 ENSGT00940000166171 ENSGT01010000222287.B.b.a.a.b.a ENSGT00950000183034.C.a.a ENSGT01030000234513.A.a.b ENSGT00980000199126 ENSGT00940000160597 ENSGT00550000075141 ENSGT00390000011674 ENSGT00940000156157 ENSGT00950000182992.a.b.a.b ENSGT00940000166728 ENSGT00390000016036 ENSGT00940000158591.g.a Stickleback MODERN SPECIES 18 GZF1 (ENSGACG00000012415) TRIB2 (ENSGACG00000012406) KLHL29 (ENSGACG00000012401) ATAD2B (ENSGACG00000012397) ENSGACG00000012395 UBXN2A (ENSGACG00000012393) mfsd2b (ENSGACG00000012385) wdcp (ENSGACG00000012380) fkbp1b (ENSGACG00000012370) mmut (ENSGACG00000012341) opn8b (ENSGACG00000012337) opn8a (ENSGACG00000012333) runx2b (ENSGACG00000012322) clic5b (ENSGACG00000012318) enpp5 (ENSGACG00000012313) ENSGACG00000012303 ##22 ENSGACG00000012300 LRFN2 (ENSGACG00000012296) zgc:112001 (ENSGACG00000012295) olfcb1 (ENSGACG00000012290) ENSGACG00000012288 olfcb1 (ENSGACG00000012285) HTR1E (ENSGACG00000012281) znf292b (ENSGACG00000012274) gjb7 (ENSGACG00000012273) ENSGACG00000012272 ENSGACG00000012270 ENSGACG00000012261 ddx51 (ENSGACG00000012252) smim8 (ENSGACG00000012249) rad51 (ENSGACG00000012241) Lumpfish MODERN SPECIES 16 FERMT1 (ENSCLMG00005015247) trmt6 (ENSCLMG00005015199) ENSCLMG00005015184 gpcpd1 (ENSCLMG00005014970) NAPB (ENSCLMG00005014961) GZF1 (ENSCLMG00005014959) TRIB2 (ENSCLMG00005014955) KLHL29 (ENSCLMG00005014953) ATAD2B (ENSCLMG00005013905) UBXN2A (ENSCLMG00005013903) mfsd2b (ENSCLMG00005013900) wdcp (ENSCLMG00005013898) ENSCLMG00005013897 mmut (ENSCLMG00005012100) opn8b (ENSCLMG00005012091) PHIP (ENSCLMG00005011467) ##22 LRFN2 (ENSCLMG00005011450) zgc:112001 (ENSCLMG00005011449) olfcb1 (ENSCLMG00005011448) ENSCLMG00005011447 ENSCLMG00005016050 znf292b (ENSCLMG00005016044) gjb7 (ENSCLMG00005016042) ENSCLMG00005016038 ankrd6b (ENSCLMG00005015993) GABRR2 (ENSCLMG00005015989) ube2j1 (ENSCLMG00005015986) GABRR1 (ENSCLMG00005015985) cfap206 (ENSCLMG00005015982) ENSCLMG00005015981 si:ch211-241j12.3 (ENSCLMG00005015979) Perciformes_a ANCESTRAL SPECIES 15 ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 Channel bull blenny MODERN SPECIES 16 TRIB2 (ENSCGOG00000012131) KLHL29 (ENSCGOG00000012132) ATAD2B (ENSCGOG00000012153) UBXN2A (ENSCGOG00000012326) mfsd2b (ENSCGOG00000012331) wdcp (ENSCGOG00000012359) fkbp1b (ENSCGOG00000012361) mmut (ENSCGOG00000012367) opn8b (ENSCGOG00000012759) opn8a (ENSCGOG00000012760) runx2b (ENSCGOG00000012772) clic5b (ENSCGOG00000013127) enpp5 (ENSCGOG00000013144) ENSCGOG00000013145 hmgn3 (ENSCGOG00000013147) PHIP (ENSCGOG00000013168) ##22 ENSCGOG00000013499 irak1bp1 (ENSCGOG00000013503) tbx18 (ENSCGOG00000013509) ENSCGOG00000013521 selenoi (ENSCGOG00000013534) ost4 (ENSCGOG00000013556) agbl5 (ENSCGOG00000013561) papola (ENSCGOG00000013567) ENSCGOG00000013572 CCNK (ENSCGOG00000013576) ccdc85cb (ENSCGOG00000013584) cyp46a1.4 (ENSCGOG00000013608) ism2b (ENSCGOG00000013909) sptlc2b (ENSCGOG00000013933) snw1 (ENSCGOG00000014577) Pike perch MODERN SPECIES 75 GZF1 (ENSSLUG00000002727) TRIB2 (ENSSLUG00000002730) KLHL29 (ENSSLUG00000002740) ATAD2B (ENSSLUG00000002835) UBXN2A (ENSSLUG00000003904) mfsd2b (ENSSLUG00000003925) wdcp (ENSSLUG00000003955) fkbp1b (ENSSLUG00000003960) mmut (ENSSLUG00000004017) opn8b (ENSSLUG00000004746) opn8a (ENSSLUG00000004752) runx2b (ENSSLUG00000004779) clic5b (ENSSLUG00000004873) enpp5 (ENSSLUG00000004907) ENSSLUG00000004910 PHIP (ENSSLUG00000005139) ##22 ENSSLUG00000006645 irak1bp1 (ENSSLUG00000006651) tbx18 (ENSSLUG00000006662) selenoi (ENSSLUG00000006697) ost4 (ENSSLUG00000006900) agbl5 (ENSSLUG00000006907) ENSSLUG00000006918 CCNK (ENSSLUG00000006927) ccdc85cb (ENSSLUG00000006945) cyp46a1.4 (ENSSLUG00000007056) ism2b (ENSSLUG00000007904) sptlc2b (ENSSLUG00000007987) snw1 (ENSSLUG00000009591) nrxn3b (ENSSLUG00000010103) ENSSLUG00000012646 Ovalentaria ANCESTRAL SPECIES 19 ENSGT00940000174827 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000168779 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a Atherinomorphae ANCESTRAL SPECIES 18 ENSGT00390000005826.a.b.h.b ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 Oryzias ANCESTRAL SPECIES 19 ENSGT00390000005826.a.b.h.b ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 Oryzias_a ANCESTRAL SPECIES 13 ENSGT00390000005826.a.b.h.b ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927.q ENSGT00940000156927.r ENSGT00940000163359.a.a ENSGT00940000155786.k.b Japanese Medaka HdrR MODERN SPECIES 16 ENSORLG00000010006 TRIB2 (ENSORLG00000023508) KLHL29 (ENSORLG00000010030) ATAD2B (ENSORLG00000010036) UBXN2A (ENSORLG00000010046) ENSORLG00000024230 mfsd2b (ENSORLG00000010081) fkbp1b (ENSORLG00000010102) wdcp (ENSORLG00000010089) mmut (ENSORLG00000010129) opn8b (ENSORLG00000010136) runx2b (ENSORLG00000010169) clic5b (ENSORLG00000010204) enpp5 (ENSORLG00000010215) hmgn3 (ENSORLG00000022398) PHIP (ENSORLG00000010356) ##22 ENSORLG00000010372 irak1bp1 (ENSORLG00000010379) tbx18 (ENSORLG00000010396) ENSORLG00000010406 selenoi (ENSORLG00000010455) ost4 (ENSORLG00000026011) agbl5 (ENSORLG00000010469) ENSORLG00000024390 ccnk (ENSORLG00000026624) ccdc85cb (ENSORLG00000010496) ENSORLG00000010516 ENSORLG00000010534 ism2b (ENSORLG00000010540) sptlc2b (ENSORLG00000010589) snw1 (ENSORLG00000010620) Oryzias_b ANCESTRAL SPECIES 17 ENSGT00390000005826.a.b.h.b ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00390000012588 ENSGT00530000065281 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927.o ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 Indian medaka MODERN SPECIES 22 TRIB2 (ENSOMEG00000020077) ENSOMEG00000020088 KLHL29 (ENSOMEG00000020150) ENSOMEG00000020176 ATAD2B (ENSOMEG00000020237) UBXN2A (ENSOMEG00000020296) mfsd2b (ENSOMEG00000020345) wdcp (ENSOMEG00000020362) fkbp1b (ENSOMEG00000020382) mmut (ENSOMEG00000020403) opn8b (ENSOMEG00000020414) runx2b (ENSOMEG00000000913) clic5b (ENSOMEG00000020513) enpp5 (ENSOMEG00000020534) hmgn3 (ENSOMEG00000020547) ENSOMEG00000000541 ##22 irak1bp1 (ENSOMEG00000020585) ENSOMEG00000020607 ENSOMEG00000020618 tbx18 (ENSOMEG00000020640) ENSOMEG00000020676 selenoi (ENSOMEG00000000972) ost4 (ENSOMEG00000020733) agbl5 (ENSOMEG00000020769) ENSOMEG00000020798 ccnk (ENSOMEG00000020837) ccdc85cb (ENSOMEG00000020857) ENSOMEG00000020922 ENSOMEG00000021003 ism2b (ENSOMEG00000021041) sptlc2b (ENSOMEG00000021070) Cyprinodontiformes ANCESTRAL SPECIES 14 ENSGT00390000005826.a.b.h.b ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 ENSGT00940000167343 Aplocheiloidei ANCESTRAL SPECIES 34 ENSGT00390000005826.a.b.h.b ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000159071.y.a ENSGT00940000165223 ENSGT00940000167479 ENSGT00940000156927.k ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 ENSGT00940000167343 Mangrove rivulus MODERN SPECIES 12 NAPB (ENSKMAG00000001402) ENSKMAG00000001453 TRIB2 (ENSKMAG00000001536) KLHL29 (ENSKMAG00000001554) ATAD2B (ENSKMAG00000001624) UBXN2A (ENSKMAG00000001648) mfsd2b (ENSKMAG00000001663) wdcp (ENSKMAG00000001685) fkbp1b (ENSKMAG00000001695) mmut (ENSKMAG00000001731) opn8b (ENSKMAG00000001793) runx2b (ENSKMAG00000001825) clic5b (ENSKMAG00000001867) enpp5 (ENSKMAG00000001914) hmgn3 (ENSKMAG00000001928) PHIP (ENSKMAG00000001959) ##22 irak1bp1 (ENSKMAG00000002158) ENSKMAG00000002136 agbl5 (ENSKMAG00000002195) ost4 (ENSKMAG00000002261) selenoi (ENSKMAG00000002281) ENSKMAG00000002338 tbx18 (ENSKMAG00000002364) ENSKMAG00000002415 ENSKMAG00000002756 ENSKMAG00000002848 ccdc85cb (ENSKMAG00000002939) ccnk (ENSKMAG00000002960) ENSKMAG00000002971 ENSKMAG00000002988 ism2b (ENSKMAG00000003190) Turquoise killifish MODERN SPECIES 1613 HNRNPA0L (ENSNFUG00015003649) ENSNFUG00015003643 TRIB2 (ENSNFUG00015003639) KLHL29 (ENSNFUG00015003630) ATAD2B (ENSNFUG00015003619) UBXN2A (ENSNFUG00015003609) mfsd2b (ENSNFUG00015003604) fkbp1b (ENSNFUG00015003598) MUT (ENSNFUG00015003506) C20H2ORF44 (ENSNFUG00015003469) opn8b (ENSNFUG00015003466) RUNX2 (ENSNFUG00015003435) clic5b (ENSNFUG00015003406) ENSNFUG00015003395 enpp5 (ENSNFUG00015003389) PHIP (ENSNFUG00015003356) ##22 ENSNFUG00015003343 irak1bp1 (ENSNFUG00015003333) tbx18 (ENSNFUG00015003317) ENSNFUG00015003313 EPT1 (ENSNFUG00015003308) ost4 (ENSNFUG00015003305) agbl5 (ENSNFUG00015003300) CYP46A1 (ENSNFUG00015003221) ccdc85cb (ENSNFUG00015003170) CCNK (ENSNFUG00015003151) ENSNFUG00015003143 ENSNFUG00015003135 ENSNFUG00015003100 ENSNFUG00015003088 ism2b (ENSNFUG00015003086) Cyprinodontoidei ANCESTRAL SPECIES 12 ENSGT00390000005826.a.b.h.b ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000159071.y.a ENSGT00940000156927.m ENSGT00940000156927.n ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 Poeciliinae DUPLICATION Poeciliinae ANCESTRAL SPECIES ENSGT00950000183107.a.a.m ##22 Poecilia ANCESTRAL SPECIES ENSGT00950000183107.a.a.m ##22 NAME_6 ANCESTRAL SPECIES ENSGT00950000183107.a.a.m ##22 Amazon molly MODERN SPECIES 90 ENSPFOG00000021867 ##22 ENSPFOG00000000167 irak1bp1 (ENSPFOG00000000174) Poeciliinae ANCESTRAL SPECIES 15 ENSGT00390000005826.a.b.h.b ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a.n ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927.m ENSGT00940000156927.n ENSGT00940000163359.a.a ENSGT00940000155786.k.b Poecilia ANCESTRAL SPECIES 9 ENSGT00390000005826.a.b.h.b ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a.n ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927.m ENSGT00940000156927.n ENSGT00940000163359.a.a ENSGT00940000155786.k.b NAME_6 ANCESTRAL SPECIES 404 ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a.n ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 Sailfin molly MODERN SPECIES 1589 runx2b (ENSPLAG00000020771) clic5b (ENSPLAG00000020804) enpp5 (ENSPLAG00000020811) hmgn3 (ENSPLAG00000020830) PHIP (ENSPLAG00000020928) ##22 ENSPLAG00000020999 irak1bp1 (ENSPLAG00000021010) ENSPLAG00000021022 DIS3L2 (ENSPLAG00000021123) ENSPLAG00000021246 tlk1b (ENSPLAG00000021361) gorasp2 (ENSPLAG00000021383) Amazon molly MODERN SPECIES 444 PHIP (ENSPFOG00000000873) ##22 ENSPFOG00000000732 irak1bp1 (ENSPFOG00000000708) tbx18 (ENSPFOG00000000670) Guppy MODERN SPECIES 452 gpcpd1 (ENSPREG00000016320) NAPB (ENSPREG00000016370) GZF1 (ENSPREG00000016398) TRIB2 (ENSPREG00000016420) KLHL29 (ENSPREG00000016483) ATAD2B (ENSPREG00000016650) UBXN2A (ENSPREG00000016750) mfsd2b (ENSPREG00000016777) wdcp (ENSPREG00000016818) fkbp1b (ENSPREG00000016827) opn8b (ENSPREG00000016868) runx2b (ENSPREG00000016918) clic5b (ENSPREG00000016948) enpp5 (ENSPREG00000016979) hmgn3 (ENSPREG00000016999) PHIP (ENSPREG00000017042) ##22 ENSPREG00000017159 tbx18 (ENSPREG00000017180) ENSPREG00000017221 selenoi (ENSPREG00000017272) agbl5 (ENSPREG00000017295) ENSPREG00000017315 ENSPREG00000017334 ccnk (ENSPREG00000017349) ccdc85cb (ENSPREG00000017391) ENSPREG00000017599 ENSPREG00000018183 ism2b (ENSPREG00000018218) sptlc2b (ENSPREG00000018232) snw1 (ENSPREG00000018278) nrxn3b (ENSPREG00000018354) Platyfish MODERN SPECIES 6 NAPB (ENSXMAG00000008625) GZF1 (ENSXMAG00000023249) TRIB2 (ENSXMAG00000021914) KLHL29 (ENSXMAG00000003497) ATAD2B (ENSXMAG00000003479) UBXN2A (ENSXMAG00000024294) mfsd2b (ENSXMAG00000003439) wdcp (ENSXMAG00000003436) fkbp1b (ENSXMAG00000027946) mmut (ENSXMAG00000003414) opn8b (ENSXMAG00000003410) runx2b (ENSXMAG00000025289) clic5b (ENSXMAG00000003397) enpp5 (ENSXMAG00000023867) hmgn3 (ENSXMAG00000026300) PHIP (ENSXMAG00000004875) ##22 ENSXMAG00000010824 irak1bp1 (ENSXMAG00000029463) ENSXMAG00000025026 tbx18 (ENSXMAG00000026286) ENSXMAG00000024806 selenoi (ENSXMAG00000022932) agbl5 (ENSXMAG00000010851) ost4 (ENSXMAG00000019908) ENSXMAG00000027920 ccnk (ENSXMAG00000025834) ccdc85cb (ENSXMAG00000029857) cyp46a1.4 (ENSXMAG00000010894) ism2b (ENSXMAG00000010908) sptlc2b (ENSXMAG00000010910) snw1 (ENSXMAG00000010928) NAME_4 ANCESTRAL SPECIES 71 ENSGT00390000005826.a.b.h.b ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000159071.y.a ENSGT00940000156927.m ENSGT00940000156927.n ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 Sheepshead minnow MODERN SPECIES 137 NAPB (ENSCVAG00000013129) ENSCVAG00000013068 TRIB2 (ENSCVAG00000013064) KLHL29 (ENSCVAG00000013056) ATAD2B (ENSCVAG00000012992) UBXN2A (ENSCVAG00000012955) mfsd2b (ENSCVAG00000012943) wdcp (ENSCVAG00000012926) fkbp1b (ENSCVAG00000012917) mmut (ENSCVAG00000012911) opn8b (ENSCVAG00000012864) runx2b (ENSCVAG00000012840) clic5b (ENSCVAG00000012794) enpp5 (ENSCVAG00000012764) hmgn3 (ENSCVAG00000012754) PHIP (ENSCVAG00000012738) ##22 ENSCVAG00000012644 irak1bp1 (ENSCVAG00000012630) tbx18 (ENSCVAG00000012623) ENSCVAG00000012566 selenoi (ENSCVAG00000012548) ost4 (ENSCVAG00000012516) agbl5 (ENSCVAG00000012508) ENSCVAG00000012432 ccnk (ENSCVAG00000012426) ccdc85cb (ENSCVAG00000012414) ENSCVAG00000012379 ENSCVAG00000012336 ENSCVAG00000012281 ism2b (ENSCVAG00000012233) sptlc2b (ENSCVAG00000012198) Mummichog DUPLICATION Mummichog MODERN SPECIES 2234 NAPB (ENSFHEG00000020487) GZF1 (ENSFHEG00000020498) TRIB2 (ENSFHEG00000000514) KLHL29 (ENSFHEG00000020650) ATAD2B (ENSFHEG00000020711) UBXN2A (ENSFHEG00000020728) mfsd2b (ENSFHEG00000020738) wdcp (ENSFHEG00000000516) fkbp1b (ENSFHEG00000020763) mmut (ENSFHEG00000020808) opn8b (ENSFHEG00000020821) runx2 (ENSFHEG00000020895) clic5b (ENSFHEG00000020931) enpp5 (ENSFHEG00000020935) hmgn3 (ENSFHEG00000020942) PHIP (ENSFHEG00000021125) ##22 ENSFHEG00000021140 irak1bp1 (ENSFHEG00000021149) Mummichog MODERN SPECIES 382 sh3bgr (ENSFHEG00000015190) ENSFHEG00000015197 get1 (ENSFHEG00000015223) ENSFHEG00000015239 ##22 BRWD1 (ENSFHEG00000015248) ##22 MIPEP (ENSFHEG00000015331) TNFRSF19 (ENSFHEG00000015343) SACS (ENSFHEG00000015368) sgcg (ENSFHEG00000015375) rps25 (ENSFHEG00000015395) trappc4 (ENSFHEG00000015416) slc37a4a (ENSFHEG00000015449) cfap45 (ENSFHEG00000015457) cltcb (ENSFHEG00000015578) ENSFHEG00000015584 snrpd2 (ENSFHEG00000015591) ENSFHEG00000015603 pglyrp5 (ENSFHEG00000015614) polr2i (ENSFHEG00000015659) Ovalentaria_B ANCESTRAL SPECIES 17 ENSGT00940000174827 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000168779 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b Cichlidae ANCESTRAL SPECIES 12 ENSGT00870000136554 ENSGT00940000174827 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000168779 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000159071.y.a ENSGT00940000156927.t ENSGT00940000156927.s ENSGT00940000163359.a.a Midas cichlid MODERN SPECIES 651 ENSACIG00000004719 ENSACIG00000004753 TRIB2 (ENSACIG00000004768) KLHL29 (ENSACIG00000004779) ATAD2B (ENSACIG00000004822) UBXN2A (ENSACIG00000004877) mfsd2b (ENSACIG00000004904) wdcp (ENSACIG00000005023) fkbp1b (ENSACIG00000005044) mmut (ENSACIG00000005060) opn8b (ENSACIG00000005091) ENSACIG00000005105 runx2b (ENSACIG00000005109) clic5b (ENSACIG00000005142) enpp5 (ENSACIG00000005556) PHIP (ENSACIG00000005569) ##22 ENSACIG00000005673 irak1bp1 (ENSACIG00000005692) tbx18 (ENSACIG00000005705) ENSACIG00000005743 selenoi (ENSACIG00000005808) ost4 (ENSACIG00000005827) agbl5 (ENSACIG00000005831) papola (ENSACIG00000005870) ENSACIG00000005955 ccnk (ENSACIG00000006007) ccdc85cb (ENSACIG00000006050) ENSACIG00000006068 ENSACIG00000006117 ENSACIG00000006159 ENSACIG00000006230 Pseudocrenilabrinae ANCESTRAL SPECIES 6 ENSGT00870000136554 ENSGT00940000174827 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000168779 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000159071.y.a ENSGT00940000156927.t ENSGT00940000156927.s.c ENSGT00940000163359.a.a Nile tilapia MODERN SPECIES 6 NAPB (ENSONIG00000000984) GZF1 (ENSONIG00000031396) TRIB2 (ENSONIG00000000992) KLHL29 (ENSONIG00000000996) ATAD2B (ENSONIG00000001000) UBXN2A (ENSONIG00000001012) mfsd2b (ENSONIG00000001013) wdcp (ENSONIG00000001017) fkbp1b (ENSONIG00000036326) mmut (ENSONIG00000001021) opn8b (ENSONIG00000001022) runx2b (ENSONIG00000033545) clic5b (ENSONIG00000001031) enpp5 (ENSONIG00000001035) hmgn3 (ENSONIG00000030158) PHIP (ENSONIG00000001037) ##22 ENSONIG00000028723 irak1bp1 (ENSONIG00000001049) tbx18 (ENSONIG00000001051) ENSONIG00000001053 selenoi (ENSONIG00000001055) ost4 (ENSONIG00000034985) agbl5 (ENSONIG00000001060) papola (ENSONIG00000001062) ENSONIG00000001067 ccnk (ENSONIG00000001069) ccdc85cb (ENSONIG00000001071) cyp46a1.4 (ENSONIG00000001074) ism2b (ENSONIG00000001082) sptlc2b (ENSONIG00000001084) snw1 (ENSONIG00000001098) Pseudocrenilabrinae_A ANCESTRAL SPECIES 3 ENSGT00870000136554 ENSGT00940000174827 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000168779 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000159071.y.a ENSGT00940000156927.t.d ENSGT00940000156927.s.c.b ENSGT00940000156927.s.c.a ENSGT00940000163359.a.a Lyretail cichlid MODERN SPECIES 316 gpcpd1 (ENSNBRG00000020037) NAPB (ENSNBRG00000019998) GZF1 (ENSNBRG00000019987) TRIB2 (ENSNBRG00000019980) KLHL29 (ENSNBRG00000019963) ATAD2B (ENSNBRG00000019913) UBXN2A (ENSNBRG00000019882) mfsd2b (ENSNBRG00000019850) wdcp (ENSNBRG00000019840) fkbp1b (ENSNBRG00000019676) mmut (ENSNBRG00000019619) opn8b (ENSNBRG00000019603) runx2b (ENSNBRG00000019587) clic5b (ENSNBRG00000019487) enpp5 (ENSNBRG00000019466) ENSNBRG00000019448 ##22 irak1bp1 (ENSNBRG00000019407) tbx18 (ENSNBRG00000019320) ENSNBRG00000019290 selenoi (ENSNBRG00000019260) ost4 (ENSNBRG00000019253) agbl5 (ENSNBRG00000019231) ENSNBRG00000019146 ENSNBRG00000019080 ccnk (ENSNBRG00000019026) ccdc85cb (ENSNBRG00000018987) ENSNBRG00000018940 ENSNBRG00000018919 CYP46A1 (ENSNBRG00000018823) ism2b (ENSNBRG00000018784) sptlc2b (ENSNBRG00000018754) Haplochromini ANCESTRAL SPECIES 13 ENSGT00870000136554 ENSGT00940000174827 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000168779 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927.t.d ENSGT00940000156927.s.c.b ENSGT00940000156927.s.c.a Burton s mouthbrooder MODERN SPECIES 289 NAPB (ENSHBUG00000016536) ENSHBUG00000016502 TRIB2 (ENSHBUG00000016472) KLHL29 (ENSHBUG00000016450) ATAD2B (ENSHBUG00000016353) UBXN2A (ENSHBUG00000016332) mfsd2b (ENSHBUG00000016323) wdcp (ENSHBUG00000016309) fkbp1b (ENSHBUG00000016304) mmut (ENSHBUG00000016299) opn8b (ENSHBUG00000016259) runx2b (ENSHBUG00000016240) clic5b (ENSHBUG00000016178) enpp5 (ENSHBUG00000016110) hmgn3 (ENSHBUG00000016105) PHIP (ENSHBUG00000016095) ##22 irak1bp1 (ENSHBUG00000016054) ENSHBUG00000016068 tbx18 (ENSHBUG00000016037) ENSHBUG00000000734 selenoi (ENSHBUG00000015945) ost4 (ENSHBUG00000015913) agbl5 (ENSHBUG00000015900) ENSHBUG00000015889 ENSHBUG00000015752 ccnk (ENSHBUG00000015743) ccdc85cb (ENSHBUG00000015718) ENSHBUG00000015625 Haplochromini_A ANCESTRAL SPECIES 11 ENSGT00870000136554 ENSGT00940000174827 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000168779 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000156927.t.d ENSGT00940000156927.s.c.b ENSGT00940000156927.s.c.a P. nyererei MODERN SPECIES 308 ENSPNYG00000000788 ENSPNYG00000000773 TRIB2 (ENSPNYG00000000764) KLHL29 (ENSPNYG00000000721) ATAD2B (ENSPNYG00000000706) UBXN2A (ENSPNYG00000000678) mfsd2b (ENSPNYG00000022718) wdcp (ENSPNYG00000022707) fkbp1b (ENSPNYG00000022701) mmut (ENSPNYG00000022693) opn8b (ENSPNYG00000022680) runx2b (ENSPNYG00000022673) clic5b (ENSPNYG00000022662) enpp5 (ENSPNYG00000022655) hmgn3 (ENSPNYG00000022647) PHIP (ENSPNYG00000022604) ##22 irak1bp1 (ENSPNYG00000022591) ENSPNYG00000022572 tbx18 (ENSPNYG00000022561) ENSPNYG00000022551 selenoi (ENSPNYG00000022534) ost4 (ENSPNYG00000022529) agbl5 (ENSPNYG00000022520) ENSPNYG00000022499 ENSPNYG00000022483 CCNK (ENSPNYG00000022455) ccdc85cb (ENSPNYG00000022393) ENSPNYG00000022361 ENSPNYG00000022346 ENSPNYG00000022303 ism2b (ENSPNYG00000022276) Haplochromini_B ANCESTRAL SPECIES 22 ENSGT00390000005826.a.b.h.b ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000168779 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000159071.y.a ENSGT00940000156927.t.d ENSGT00940000156927.s.c.b ENSGT00940000156927.s.c.a ENSGT00940000163359.a.a Eastern happy MODERN SPECIES 6 ENSACLG00000025879 GZF1 (ENSACLG00000025866) TRIB2 (ENSACLG00000025861) KLHL29 (ENSACLG00000025762) ATAD2B (ENSACLG00000025731) UBXN2A (ENSACLG00000025716) mfsd2b (ENSACLG00000025615) wdcp (ENSACLG00000025608) fkbp1b (ENSACLG00000025603) mmut (ENSACLG00000025579) opn8b (ENSACLG00000025561) runx2b (ENSACLG00000025523) clic5b (ENSACLG00000025506) enpp5 (ENSACLG00000025497) hmgn3 (ENSACLG00000025488) PHIP (ENSACLG00000025452) ##22 irak1bp1 (ENSACLG00000025433) ENSACLG00000025440 tbx18 (ENSACLG00000025355) ENSACLG00000025333 selenoi (ENSACLG00000025307) ost4 (ENSACLG00000025301) agbl5 (ENSACLG00000025288) ENSACLG00000025140 ENSACLG00000025121 ccnk (ENSACLG00000025102) ccdc85cb (ENSACLG00000025029) ENSACLG00000024918 ENSACLG00000024908 ENSACLG00000024900 ENSACLG00000024870 Zebra mbuna MODERN SPECIES 1097 ENSMZEG00005010711 TRIB2 (ENSMZEG00005010706) ENSMZEG00005010703 KLHL29 (ENSMZEG00005010689) ATAD2B (ENSMZEG00005010661) UBXN2A (ENSMZEG00005010657) mfsd2b (ENSMZEG00005010643) wdcp (ENSMZEG00005010629) fkbp1b (ENSMZEG00005010625) mmut (ENSMZEG00005010594) opn8b (ENSMZEG00005010576) runx2b (ENSMZEG00005010495) clic5b (ENSMZEG00005010472) enpp5 (ENSMZEG00005010456) hmgn3 (ENSMZEG00005010445) PHIP (ENSMZEG00005010407) ##22 ENSMZEG00005010393 irak1bp1 (ENSMZEG00005010384) tbx18 (ENSMZEG00005010339) ENSMZEG00005010314 selenoi (ENSMZEG00005010299) ost4 (ENSMZEG00005010288) agbl5 (ENSMZEG00005010260) ENSMZEG00005010175 ENSMZEG00005010148 ccnk (ENSMZEG00005010125) ccdc85cb (ENSMZEG00005010113) ENSMZEG00005007794 ENSMZEG00005007742 ENSMZEG00005006616 ENSMZEG00005006534 Pomacentridae ANCESTRAL SPECIES 30 ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000168779 ENSGT00940000154598 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b Pomacentridae_A ANCESTRAL SPECIES 26 ENSGT00870000136554 ENSGT00950000182986.a.b.a ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000168779 ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 Amphiprion ANCESTRAL SPECIES 81 ENSGT00950000182986.a.b.a ENSGT00950000182912.b.a.a.b.b.b.a.l.b ENSGT00940000158824 ENSGT00550000074694.b ENSGT00520000055567.a.b ENSGT00390000005318.b.b.a ENSGT00390000001660 ENSGT00940000153311.a.b.b ENSGT00390000011892 ENSGT01100000263524.C ENSGT01100000263524.D.d ENSGT00940000166083 ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803 ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00940000168779.c ENSGT00940000167479 ENSGT00940000165223 ENSGT00940000159071.y.a ENSGT00940000156927 ENSGT00940000163359.a.a ENSGT00940000155786.k.b ENSGT00390000010423 Orange clownfish MODERN SPECIES 2 ENSAPEG00000017170 ENSAPEG00000017151 KLHL29 (ENSAPEG00000017114) ATAD2B (ENSAPEG00000017035) UBXN2A (ENSAPEG00000017013) mfsd2b (ENSAPEG00000016997) wdcp (ENSAPEG00000016987) fkbp1b (ENSAPEG00000016977) mmut (ENSAPEG00000016956) opn8b (ENSAPEG00000016940) opn8a (ENSAPEG00000016914) runx2b (ENSAPEG00000016827) clic5b (ENSAPEG00000016806) enpp5 (ENSAPEG00000016794) hmgn3 (ENSAPEG00000016781) PHIP (ENSAPEG00000016748) ##22 ENSAPEG00000016739 irak1bp1 (ENSAPEG00000016719) tbx18 (ENSAPEG00000016657) ENSAPEG00000016627 ENSAPEG00000016614 ost4 (ENSAPEG00000016606) agbl5 (ENSAPEG00000016580) ENSAPEG00000016370 ENSAPEG00000016330 ccnk (ENSAPEG00000016320) ccdc85cb (ENSAPEG00000016309) cyp46a1.4 (ENSAPEG00000016226) ism2b (ENSAPEG00000016202) sptlc2b (ENSAPEG00000016143) snw1 (ENSAPEG00000016075) Clown anemonefish MODERN SPECIES 1364 ATAD2B (ENSAOCG00000008338) UBXN2A (ENSAOCG00000008351) mfsd2b (ENSAOCG00000008359) wdcp (ENSAOCG00000008368) fkbp1b (ENSAOCG00000008389) mmut (ENSAOCG00000008432) opn8b (ENSAOCG00000008443) opn8a (ENSAOCG00000008463) runx2b (ENSAOCG00000001813) clic5b (ENSAOCG00000009871) enpp5 (ENSAOCG00000009878) hmgn3 (ENSAOCG00000009889) PHIP (ENSAOCG00000010009) ##22 ENSAOCG00000010032 irak1bp1 (ENSAOCG00000010041) tbx18 (ENSAOCG00000010083) ENSAOCG00000000624 Spiny chromis MODERN SPECIES 1431 runx2b (ENSAPOG00000013533) ENSAPOG00000013488 clic5b (ENSAPOG00000013477) enpp5 (ENSAPOG00000013416) hmgn3 (ENSAPOG00000013394) PHIP (ENSAPOG00000013372) ##22 Bicolor damselfish MODERN SPECIES 402 ATAD2B (ENSSPAG00000009500) UBXN2A (ENSSPAG00000009552) mfsd2b (ENSSPAG00000009566) wdcp (ENSSPAG00000009582) fkbp1b (ENSSPAG00000009590) mmut (ENSSPAG00000009611) opn8b (ENSSPAG00000009659) opn8a (ENSSPAG00000009671) runx2b (ENSSPAG00000009688) clic5b (ENSSPAG00000009733) ENSSPAG00000009756 enpp5 (ENSSPAG00000009761) hmgn3 (ENSSPAG00000009768) PHIP (ENSSPAG00000009790) ##22 ENSSPAG00000009873 irak1bp1 (ENSSPAG00000009882) tbx18 (ENSSPAG00000009892) ENSSPAG00000009918 Protacanthopterygii ANCESTRAL SPECIES 92 ENSGT01030000234613.b.a.a.c.a ENSGT01030000234613.b.a.b ENSGT00940000168728 ENSGT00940000155428.b ENSGT00940000160301 ENSGT00390000018717.b.a.a ENSGT00390000001607 ENSGT01090000260080.a ENSGT00390000005826.a.b.h.a ENSGT00550000074922 ENSGT00390000010738 ENSGT00940000156598.d ENSGT00940000156406.b ENSGT00940000160562 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00530000065281 ENSGT00390000012588 ENSGT00940000155566 ENSGT00940000164803.a ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 ENSGT00490000043329.a.b.g.b ENSGT01030000234527.A.a.a.b.b ENSGT00940000155459.x.a ENSGT00940000153897.b.b ENSGT00940000153739.a.b.s ENSGT00940000156975 ENSGT00530000063834.e.b Northern pike MODERN SPECIES 17 ppp1r14c (ENSELUG00000030754) DDX1 (ENSELUG00000006743) nbas (ENSELUG00000007088) ENSELUG00000033088 lratd1 (ENSELUG00000025774) sec63 (ENSELUG00000007214) iyd (ENSELUG00000007281) itsn2a (ENSELUG00000007309) ENSELUG00000007344 ENSELUG00000007505 runx2b (ENSELUG00000007656) ENSELUG00000025146 clic5b (ENSELUG00000007750) enpp5 (ENSELUG00000007776) ENSELUG00000033400 PHIP (ENSELUG00000007846) ##22 ENSELUG00000007890 ENSELUG00000007929 ENSELUG00000007912 irak1bp1 (ENSELUG00000007939) tbx18 (ENSELUG00000007946) ENSELUG00000007959 selenoi (ENSELUG00000007979) ost4 (ENSELUG00000007999) agbl5 (ENSELUG00000008027) tmem214 (ENSELUG00000008066) mapre3b (ENSELUG00000008103) dpysl5b (ENSELUG00000008137) dnmt3aa (ENSELUG00000008170) dtnba (ENSELUG00000008203) KIF3C (ENSELUG00000008250) Salmoninae ANCESTRAL SPECIES 879 ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00940000155566.w ENSGT00950000183117.b ENSGT00390000016516 ENSGT00940000158032 ENSGT00390000002693 ENSGT00490000043329.a.b.g.b.n Salmoninae_a ANCESTRAL SPECIES 68 ENSGT01070000253766.C.o.a.g.b ENSGT00390000016168.a ENSGT00940000159097 ENSGT00560000077266.a ENSGT00940000160174.f ENSGT00940000155726.qb ENSGT00940000156274.p ENSGT00940000156248.e.b.b ENSGT00940000164948 ENSGT00950000182941.a.a.a.a ENSGT00950000182985.b.a.h ENSGT00940000161165.i ENSGT00940000155936.a.b ENSGT00940000166083.e.a ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00940000155566.w ENSGT00950000183117.b ENSGT00490000043329.a.b.g.b.m ENSGT00940000155459.x.a ENSGT00940000153739.a.b.s.g Salmo ANCESTRAL SPECIES 52 ENSGT01070000253766.C.o.a.g.b ENSGT00390000016168.a ENSGT00940000159097 ENSGT00560000077266.a ENSGT00940000171557 ENSGT00940000160174.f ENSGT00940000156274.p ENSGT00940000156248.e.b.b ENSGT00940000164948 ENSGT00950000182941.a.a.a.a ENSGT00950000182985.b.a.h ENSGT00940000161165.i ENSGT00940000155936.a.b ENSGT00940000166083.e.a ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00940000155566.w ENSGT00950000183117.b ENSGT00490000043329.a.b.g.b.m ENSGT00940000155459.x.a ENSGT00940000153739.a.b.s.g Atlantic salmon MODERN SPECIES 6 rps12 (ENSSSAG00000100974) tcf21 (ENSSSAG00000096772) SGK1 (ENSSSAG00000058955) ENSSSAG00000089812 HBS1L (ENSSSAG00000065234) MYB (ENSSSAG00000065168) armc1l (ENSSSAG00000100347) ENSSSAG00000110032 ENSSSAG00000085875 ENSSSAG00000111755 ENSSSAG00000048091 ENSSSAG00000002148 ENSSSAG00000111511 ENSSSAG00000117369 hmgn3 (ENSSSAG00000099936) ENSSSAG00000097093 ##22 ENSSSAG00000097427 ENSSSAG00000054711 tbx18 (ENSSSAG00000107202) selenoi (ENSSSAG00000059365) ENSSSAG00000081879 ENSSSAG00000112119 KIF3C (ENSSSAG00000120471) ENSSSAG00000122164 ENSSSAG00000085616 tfap2d (ENSSSAG00000083685) ENSSSAG00000104997 adamts3 (ENSSSAG00000047659) SMARCA2 (ENSSSAG00000045598) ENSSSAG00000014321 ENSSSAG00000043060 River trout MODERN SPECIES 28 mtmr9 (ENSSTUG00000030320) xkr6b (ENSSTUG00000030360) ccm2 (ENSSTUG00000030373) ENSSTUG00000030562 fam167ab (ENSSTUG00000030570) ENSSTUG00000030576 zgc:153284 (ENSSTUG00000030587) rps12 (ENSSTUG00000030601) tcf21 (ENSSTUG00000030609) hbs1l (ENSSTUG00000030620) hbs1l (ENSSTUG00000030663) myb (ENSSTUG00000032038) lratd1 (ENSSTUG00000032063) runx2b (ENSSTUG00000032073) ENSSTUG00000032091 PHIP (ENSSTUG00000032187) ##22 tbx18 (ENSSTUG00000033928) Oncorhynchus ANCESTRAL SPECIES 55 ENSGT01070000253766.C.o.a.g.b ENSGT00390000016168.a ENSGT00940000159097 ENSGT00560000077266.a ENSGT00940000160174.f ENSGT00940000155726.qb ENSGT00940000156274.p ENSGT00940000156248.e.b.b ENSGT00940000164948 ENSGT00950000182941.a.a.a.a ENSGT00950000182985.b.a.h ENSGT00940000161165.i ENSGT00940000155936.a.b ENSGT00940000166083.e.a ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00940000155566.w ENSGT00950000183117.b ENSGT00390000016516.f.a ENSGT00490000043329.a.b.g.b.m ENSGT00940000155459.x.a ENSGT00940000153739.a.b.s.g ENSGT00940000156975.n.b ENSGT00950000182848.d.f Oncorhynchus_a ANCESTRAL SPECIES 81 ENSGT00940000157818 ENSGT01070000253766.C.o.a.g.b ENSGT00390000016168.a ENSGT00940000159097 ENSGT00560000077266.a ENSGT00940000160174.f ENSGT00940000156274.p ENSGT00940000156248.e.b.b ENSGT00940000164948 ENSGT00950000182941.a.a.a.a ENSGT00950000182985.b.a.h ENSGT00940000161165.i ENSGT00940000155936.a.b ENSGT00940000166083.e.a ENSGT01040000240523 ENSGT00950000183107.a.a ##22 ENSGT00940000155566.w ENSGT00950000183117.b ENSGT00390000016516.e ENSGT00490000043329.a.b.g.b.m Coho salmon MODERN SPECIES 3 zgc:153284 (ENSOKIG00005008413) rps12 (ENSOKIG00005008392) ENSOKIG00005008385 tcf21 (ENSOKIG00005008375) hbs1l (ENSOKIG00005008024) ENSOKIG00005007893 armc1l (ENSOKIG00005007864) ENSOKIG00005007821 ENSOKIG00005007810 PPP1R14C (ENSOKIG00005007794) ENSOKIG00005007781 lratd1 (ENSOKIG00005007751) ENSOKIG00005007745 runx2b (ENSOKIG00005007701) ENSOKIG00005007679 PHIP (ENSOKIG00005006050) ##22 tbx18 (ENSOKIG00005005781) selenoi (ENSOKIG00005005717) ost4 (ENSOKIG00005005701) MAPRE3 (ENSOKIG00005005678) KIF3C (ENSOKIG00005005638) rab10 (ENSOKIG00005005622) tfap2d (ENSOKIG00005005616) ENSOKIG00005005605 Rainbow trout MODERN SPECIES 29 ENSOMYG00000055202 ENSOMYG00000008519 ENSOMYG00000008565 ENSOMYG00000062251 ENSOMYG00000070205 ENSOMYG00000001421 ENSOMYG00000054045 ENSOMYG00000019693 ENSOMYG00000060391 ENSOMYG00000068643 ENSOMYG00000077823 ENSOMYG00000064844 ENSOMYG00000027370 ENSOMYG00000016143 ENSOMYG00000063433 ENSOMYG00000071634 ##22 Huchen DUPLICATION Huchen DUPLICATION Huchen DUPLICATION Huchen MODERN SPECIES 5334 ENSHHUG00000030022 ENSHHUG00000030020 ##22 ENSHHUG00000030016 Huchen MODERN SPECIES 7157 ENSHHUG00000014467 ##22 ENSHHUG00000014460 Huchen MODERN SPECIES 9329 ENSHHUG00000038338 ENSHHUG00000038336 ##22 Huchen MODERN SPECIES 9889 ENSHHUG00000009413 ##22 Cyclostomata ANCESTRAL SPECIES ENSGT00950000183107.a.a ##22 Lamprey MODERN SPECIES 5097 ENSPMAG00000005678 ##22 Hagfish MODERN SPECIES 1242 ENSEBUG00000015210 ENSEBUG00000009678 ENSEBUG00000011477 ENSEBUG00000004617 ENSEBUG00000009542 ENSEBUG00000008656 ENSEBUG00000016332 ENSEBUG00000011674 si:dkey-183i3.5 (ENSEBUG00000010689) ENSEBUG00000006206 ENSEBUG00000007794 ENSEBUG00000003633 LSM10 (ENSEBUG00000001312) ENSEBUG00000011990 ##22 ENSEBUG00000016063 ##22 dhdds (ENSEBUG00000015222) ENSEBUG00000008441 ENSEBUG00000002451 ENSEBUG00000005035 ENSEBUG00000015922 ENSEBUG00000010581 ENSEBUG00000004766 gtf2e1 (ENSEBUG00000005538) ENSEBUG00000003315 Vertebrata ANCESTRAL SPECIES ENSGT00950000183107.b ##22 Cyclostomata ANCESTRAL SPECIES 633 ENSGT00390000007879 ENSGT00950000183107.b ##22 Lamprey MODERN SPECIES 2096 dhdds (ENSPMAG00000000931) ENSPMAG00000000938 ##22 ENSPMAG00000000941 Hagfish MODERN SPECIES 1242 ENSEBUG00000003315 gtf2e1 (ENSEBUG00000005538) ENSEBUG00000004766 ENSEBUG00000010581 ENSEBUG00000015922 ENSEBUG00000005035 ENSEBUG00000002451 ENSEBUG00000008441 dhdds (ENSEBUG00000015222) ENSEBUG00000016063 ##22 ENSEBUG00000011990 ##22 LSM10 (ENSEBUG00000001312) ENSEBUG00000003633 ENSEBUG00000007794 ENSEBUG00000006206 si:dkey-183i3.5 (ENSEBUG00000010689) ENSEBUG00000011674 ENSEBUG00000016332 ENSEBUG00000008656 ENSEBUG00000009542 ENSEBUG00000004617 ENSEBUG00000011477 ENSEBUG00000009678 ENSEBUG00000015210 Gnathostomata ANCESTRAL SPECIES ENSGT00950000183107.b ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00950000183107.b ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00950000183107.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT00950000183107.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000183107.b ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000183107.b ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000183107.b ##22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00950000183107.b ##22 Salmoninae ANCESTRAL SPECIES ENSGT00950000183107.b ##22 Huchen MODERN SPECIES 4106 ENSHHUG00000016390 ##22 ENSHHUG00000016383 #22 ENSHHUG00000016380 ENSHHUG00000016371 Ciona ANCESTRAL SPECIES ENSGT00950000183107 #22 Ciona savignyi MODERN SPECIES 330 ENSCSAVG00000010284 ENSCSAVG00000010285 ENSCSAVG00000010288 ENSCSAVG00000010289 ENSCSAVG00000010406 ENSCSAVG00000010408 ENSCSAVG00000010410 ENSCSAVG00000010478 ENSCSAVG00000010481 ENSCSAVG00000010487 ENSCSAVG00000010489 ENSCSAVG00000010491 ENSCSAVG00000010528 ENSCSAVG00000010529 ENSCSAVG00000010530 ENSCSAVG00000010551 #22 ENSCSAVG00000010553 ENSCSAVG00000010558 ENSCSAVG00000010559 ENSCSAVG00000010564 ENSCSAVG00000010567 ENSCSAVG00000010624 ENSCSAVG00000010626 ENSCSAVG00000010627 ENSCSAVG00000010628 ENSCSAVG00000010629 ENSCSAVG00000010630 ENSCSAVG00000010633 ENSCSAVG00000010644 ENSCSAVG00000010649 ENSCSAVG00000010663 Ciona intestinalis DUPLICATION Ciona intestinalis MODERN SPECIES 3 ENSCING00000001688 ENSCING00000024221 ENSCING00000006743 ENSCING00000011275 ENSCING00000011276 ENSCING00000001672 ENSCING00000001683 ENSCING00000000484 ENSCING00000010446 ENSCING00000024715 ENSCING00000000893 ENSCING00000000890 ENSCING00000018773 ENSCING00000000888 ENSCING00000021373 ENSCING00000006196 #22 ENSCING00000011274 ENSCING00000024293 ENSCING00000006201 #22 ENSCING00000021697 #22 zf(cchc)-17 (ENSCING00000024084) ENSCING00000006216 ENSCING00000019364 ENSCING00000006224 ENSCING00000024086 ENSCING00000021692 ENSCING00000011272 ENSCING00000018289 ENSCING00000022495 ENSCING00000020323 ENSCING00000022800 Ciona intestinalis DUPLICATION Ciona intestinalis MODERN SPECIES 3 ENSCING00000001595 ENSCING00000024604 ENSCING00000006264 ENSCING00000022800 ENSCING00000020323 ENSCING00000022495 ENSCING00000018289 ENSCING00000011272 ENSCING00000021692 ENSCING00000024086 ENSCING00000006224 ENSCING00000019364 ENSCING00000006216 zf(cchc)-17 (ENSCING00000024084) ENSCING00000021697 #22 ENSCING00000006201 #22 ENSCING00000024293 ENSCING00000011274 ENSCING00000006196 #22 ENSCING00000021373 ENSCING00000000888 ENSCING00000018773 ENSCING00000000890 ENSCING00000000893 ENSCING00000024715 ENSCING00000010446 ENSCING00000000484 ENSCING00000001683 ENSCING00000001672 ENSCING00000011276 ENSCING00000011275 Ciona intestinalis MODERN SPECIES 3 ENSCING00000021274 ENSCING00000001595 ENSCING00000024604 ENSCING00000006264 ENSCING00000022800 ENSCING00000020323 ENSCING00000022495 ENSCING00000018289 ENSCING00000011272 ENSCING00000021692 ENSCING00000024086 ENSCING00000006224 ENSCING00000019364 ENSCING00000006216 zf(cchc)-17 (ENSCING00000024084) ENSCING00000021697 #22 ENSCING00000006201 #22 ENSCING00000024293 ENSCING00000011274 ENSCING00000006196 #22 ENSCING00000021373 ENSCING00000000888 ENSCING00000018773 ENSCING00000000890 ENSCING00000000893 ENSCING00000024715 ENSCING00000010446 ENSCING00000000484 ENSCING00000001683 ENSCING00000001672 ENSCING00000011276