Vertebrata ANCESTRAL SPECIES 105 ENSGT00390000006191 #11 ENSGT00390000008727.a.b #14 ENSGT00950000183181.B #22 Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES 2 ENSGT00950000183050.b.a #7 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.d ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000158296 ENSGT00390000013814 ENSGT00390000012948.b ENSGT00730000111160 ENSGT00950000182767.b.a.a ENSGT00390000017718 ENSGT00390000016736.a ENSGT00940000155583 ENSGT00390000002201 ENSGT00550000074807.d ENSGT00940000162391 Euteleostomi ANCESTRAL SPECIES 18 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00390000013814 ENSGT00390000012948.b ENSGT00730000111160 ENSGT00950000182767.b.a.a ENSGT00390000017718 ENSGT00940000158296 ENSGT00390000016736.a ENSGT00940000155583 ENSGT00390000002201 Sarcopterygii ANCESTRAL SPECIES 7 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Tetrapoda ANCESTRAL SPECIES 23 ENSGT00940000158237 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Amniota ANCESTRAL SPECIES 8 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Mammalia ANCESTRAL SPECIES 26 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Theria ANCESTRAL SPECIES 14 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Eutheria ANCESTRAL SPECIES 12 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 Boreoeutheria ANCESTRAL SPECIES 3 ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000155077.e.a ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Glires ANCESTRAL SPECIES 12 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000155077.e.a ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Rodentia ANCESTRAL SPECIES 3 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.q.a ##30 ENSGT00940000154832.m.a ##32 ENSGT00940000155226.q.b ##30 ENSGT00940000154832.n #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Rodentia_A ANCESTRAL SPECIES 2 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.r #30 ENSGT00940000154832.n #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Sciuridae ANCESTRAL SPECIES 8 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT01010000230324 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.r #30 ENSGT00940000154832.n #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Marmotini ANCESTRAL SPECIES 15 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT01010000230324 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.r #30 ENSGT00940000154832.n #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Marmotini_b ANCESTRAL SPECIES 14 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191.e #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.r #30 ENSGT00940000154832.n #32 ENSGT00550000074873.l.b.c #33 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Squirrel MODERN SPECIES 95 PELI2 (ENSSTOG00000020268) #7 TMEM260 (ENSSTOG00000012683) #8 OTX2 (ENSSTOG00000028544) #9 EXOC5 (ENSSTOG00000024424) #10 ENSSTOG00000011073 #11 NAA30 (ENSSTOG00000011080) #12 CCDC198 (ENSSTOG00000010860) #13 SLC35F4 (ENSSTOG00000010865) #14 ARMH4 (ENSSTOG00000013525) #15 ACTR10 (ENSSTOG00000013532) #16 PSMA3 (ENSSTOG00000013539) #17 ARID4A (ENSSTOG00000019680) #18 ENSSTOG00000031234 #19 TIMM9 (ENSSTOG00000030979) #20 KIAA0586 (ENSSTOG00000000221) #21 DACT1 (ENSSTOG00000028057) #22 ENSSTOG00000032385 #23 DAAM1 (ENSSTOG00000003389) #24 GPR135 (ENSSTOG00000003415) #25 ENSSTOG00000030470 #26 RTN1 (ENSSTOG00000023340) #27 LRRC9 (ENSSTOG00000024770) #28 PCNX4 (ENSSTOG00000005741) #29 DHRS7 (ENSSTOG00000007361) #30 ENSSTOG00000029945 #31 PPM1A (ENSSTOG00000014586) #32 ENSSTOG00000021643 #33 C14orf39 (ENSSTOG00000031022) #34 SIX6 (ENSSTOG00000014602) #35 SIX1 (ENSSTOG00000027309) #36 SIX4 (ENSSTOG00000029039) #37 Arctic ground squirrel MODERN SPECIES 442 KIAA0586 (ENSUPAG00010002504) #21 DACT1 (ENSUPAG00010002490) #22 DAAM1 (ENSUPAG00010002365) #24 GPR135 (ENSUPAG00010002360) #25 L3HYPDH (ENSUPAG00010002345) JKAMP (ENSUPAG00010002317) CCDC175 (ENSUPAG00010002299) RTN1 (ENSUPAG00010002252) #27 LRRC9 (ENSUPAG00010001941) #28 PCNX4 (ENSUPAG00010001916) #29 DHRS7 (ENSUPAG00010001895) #30 Alpin marmot MODERN SPECIES 7 OTX2 (ENSMMMG00000005205) #9 ENSMMMG00000005219 EXOC5 (ENSMMMG00000005231) #10 AP5M1 (ENSMMMG00000005334) #11 ENSMMMG00000005364 NAA30 (ENSMMMG00000005369) #12 CCDC198 (ENSMMMG00000005385) #13 SLC35F4 (ENSMMMG00000005414) #14 ARMH4 (ENSMMMG00000005430) #15 ACTR10 (ENSMMMG00000005466) #16 PSMA3 (ENSMMMG00000005482) #17 ARID4A (ENSMMMG00000005513) #18 ENSMMMG00000005547 TIMM9 (ENSMMMG00000005557) #20 KIAA0586 (ENSMMMG00000005607) #21 DACT1 (ENSMMMG00000005720) #22 DAAM1 (ENSMMMG00000005751) #24 GPR135 (ENSMMMG00000005921) #25 L3HYPDH (ENSMMMG00000005927) JKAMP (ENSMMMG00000005935) CCDC175 (ENSMMMG00000005957) RTN1 (ENSMMMG00000006010) #27 ENSMMMG00000006035 LRRC9 (ENSMMMG00000006040) #28 PCNX4 (ENSMMMG00000006153) #29 ENSMMMG00000006169 #30 ENSMMMG00000006186 ##30 Eurasian red squirrel MODERN SPECIES 11 ENSSVLG00005003294 #9 ENSSVLG00005003276 EXOC5 (ENSSVLG00005003254) #10 AP5M1 (ENSSVLG00005003216) #11 NAA30 (ENSSVLG00005003191) #12 CCDC198 (ENSSVLG00005003166) #13 ENSSVLG00005003152 SLC35F4 (ENSSVLG00005003120) #14 ARMH4 (ENSSVLG00005003094) #15 ACTR10 (ENSSVLG00005003078) #16 PSMA3 (ENSSVLG00005003023) #17 ARID4A (ENSSVLG00005002973) #18 TOMM20L (ENSSVLG00005002927) TIMM9 (ENSSVLG00005002892) #20 KIAA0586 (ENSSVLG00005002832) #21 DACT1 (ENSSVLG00005002770) #22 ENSSVLG00005002748 ENSSVLG00005002731 ENSSVLG00005002714 DAAM1 (ENSSVLG00005002685) #24 GPR135 (ENSSVLG00005002649) #25 L3HYPDH (ENSSVLG00005002632) JKAMP (ENSSVLG00005002582) CCDC175 (ENSSVLG00005002526) ENSSVLG00005002502 ENSSVLG00005002481 RTN1 (ENSSVLG00005002388) #27 LRRC9 (ENSSVLG00005002265) #28 PCNX4 (ENSSVLG00005002224) #29 DHRS7 (ENSSVLG00005002208) #30 PPM1A (ENSSVLG00005002171) #32 Hystricomorpha ANCESTRAL SPECIES 33 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102.p #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.q.a.d ##30 ENSGT00940000154832.m.a ##32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Hystricomorpha_a ANCESTRAL SPECIES 27 ENSGT00940000158583 #28 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102.p #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000158237 ENSGT00940000159561 ENSGT00390000011854 ENSGT00530000064222.b Guinea pig MODERN SPECIES 20 LRRC9 (ENSCPOG00000007459) #28 ENSCPOG00000023496 PELI2 (ENSCPOG00000040104) #7 TMEM260 (ENSCPOG00000005778) #8 OTX2 (ENSCPOG00000003420) #9 EXOC5 (ENSCPOG00000011745) #10 AP5M1 (ENSCPOG00000003004) #11 CCDC198 (ENSCPOG00000003345) #13 SLC35F4 (ENSCPOG00000011150) #14 ACTR10 (ENSCPOG00000008553) #16 PSMA3 (ENSCPOG00000006114) #17 ENSCPOG00000032725 #18 ENSCPOG00000009290 #18 TIMM9 (ENSCPOG00000035363) #20 KIAA0586 (ENSCPOG00000001244) #21 DACT1 (ENSCPOG00000039410) #22 DAAM1 (ENSCPOG00000013581) #24 L3HYPDH (ENSCPOG00000014476) JKAMP (ENSCPOG00000014480) ENSCPOG00000007411 ##27 KTN1 (ENSCPOG00000014763) TBPL2 (ENSCPOG00000006151) ATG14 (ENSCPOG00000001010) FBXO34 (ENSCPOG00000032685) Hystricomorpha_b ANCESTRAL SPECIES 46 ENSGT00940000158583 #28 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102.o.a #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000158237 ENSGT00940000159561 ENSGT00390000011854 ENSGT00530000064222.b ENSGT00940000161472 ENSGT00390000017666.p ENSGT00940000158243 ENSGT00940000157417 ENSGT00940000155944 Long-tailed chinchilla MODERN SPECIES 173 TMEM260 (ENSCLAG00000004193) #8 ENSCLAG00000004270 OTX2 (ENSCLAG00000004839) #9 EXOC5 (ENSCLAG00000005217) #10 AP5M1 (ENSCLAG00000006373) #11 NAA30 (ENSCLAG00000002822) #12 CCDC198 (ENSCLAG00000002962) #13 SLC35F4 (ENSCLAG00000003156) #14 ARMH4 (ENSCLAG00000003534) #15 ACTR10 (ENSCLAG00000003957) #16 PSMA3 (ENSCLAG00000004169) #17 ENSCLAG00000003914 #18 TIMM9 (ENSCLAG00000004069) #20 KIAA0586 (ENSCLAG00000004355) #21 ENSCLAG00000005082 DACT1 (ENSCLAG00000005231) #22 DAAM1 (ENSCLAG00000005812) #24 GPR135 (ENSCLAG00000003808) #25 L3HYPDH (ENSCLAG00000003825) JKAMP (ENSCLAG00000004418) CCDC175 (ENSCLAG00000004873) ENSCLAG00000005327 ##27 ENSCLAG00000004233 KTN1 (ENSCLAG00000004903) ENSCLAG00000007765 TBPL2 (ENSCLAG00000013407) ATG14 (ENSCLAG00000010991) FBXO34 (ENSCLAG00000018001) Degu MODERN SPECIES 48 ENSODEG00000020144 PELI2 (ENSODEG00000015305) #7 TMEM260 (ENSODEG00000014526) #8 OTX2 (ENSODEG00000016325) #9 ENSODEG00000014704 #10 AP5M1 (ENSODEG00000014310) #11 NAA30 (ENSODEG00000014442) #12 CCDC198 (ENSODEG00000015422) #13 SLC35F4 (ENSODEG00000014001) #14 ENSODEG00000014617 #16 ENSODEG00000014244 #17 ENSODEG00000014881 #18 ENSODEG00000014309 #18 ENSODEG00000014880 ENSODEG00000014925 #20 DACT1 (ENSODEG00000014574) #22 ENSODEG00000015435 DAAM1 (ENSODEG00000014128) #24 L3HYPDH (ENSODEG00000015887) JKAMP (ENSODEG00000014669) ENSODEG00000014803 ##27 ENSODEG00000014970 ENSODEG00000020245 ENSODEG00000020257 ENSODEG00000015513 ENSODEG00000014407 KTN1 (ENSODEG00000015972) ENSODEG00000020182 ENSODEG00000020193 TBPL2 (ENSODEG00000015283) ATG14 (ENSODEG00000014397) Naked mole-rat female MODERN SPECIES 18 ENSHGLG00000040983 #12 CCDC198 (ENSHGLG00000001456) #13 SLC35F4 (ENSHGLG00000002649) #14 ENSHGLG00000046462 ARMH4 (ENSHGLG00000002733) #15 ACTR10 (ENSHGLG00000002598) #16 ENSHGLG00000037877 ENSHGLG00000009085 #17 ENSHGLG00000036546 ARID4A (ENSHGLG00000001903) #18 ENSHGLG00000034425 ENSHGLG00000002378 ENSHGLG00000042053 KIAA0586 (ENSHGLG00000003054) #21 ENSHGLG00000037363 DACT1 (ENSHGLG00000001348) #22 ENSHGLG00000003874 DAAM1 (ENSHGLG00000009999) #24 GPR135 (ENSHGLG00000017696) #25 L3HYPDH (ENSHGLG00000014479) JKAMP (ENSHGLG00000016840) ENSHGLG00000036500 RTN1 (ENSHGLG00000011293) ##27 ENSHGLG00000034621 ENSHGLG00000044183 ##27 ENSHGLG00000014070 #28 PCNX4 (ENSHGLG00000011665) #29 ENSHGLG00000014306 ##30 ENSHGLG00000042703 PPM1A (ENSHGLG00000012982) #32 ENSHGLG00000010109 #34 Rodentia_B ANCESTRAL SPECIES 7 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.q.a ##30 ENSGT00940000155226.q.b ##30 ENSGT00940000154832.n #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Myomorpha ANCESTRAL SPECIES 7 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.q.a ##30 ENSGT00940000155226.q.b ##30 ENSGT00940000154832.n #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Muroidea ANCESTRAL SPECIES 16 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097.i ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.q.a ##30 ENSGT00940000155226.q.b ##30 ENSGT00940000154832.n #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Muroidea_A ANCESTRAL SPECIES 15 ENSGT00940000158072 ENSGT00940000158704 ENSGT00940000156106 ENSGT00660000095541.a.b ENSGT00940000161597 ENSGT00950000183148.a ENSGT00940000154071.A ENSGT00940000155959 ENSGT00940000155517 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097.i ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.q.a ##30 ENSGT00940000155226.q.b ##30 ENSGT00940000154832.n #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Cricetidae ANCESTRAL SPECIES 17 ENSGT00940000158072 ENSGT00940000158704 ENSGT00940000156106 ENSGT00660000095541.a.b ENSGT00940000161597 ENSGT00950000183148.a ENSGT00940000154071.A ENSGT00940000155959 ENSGT00940000155517 ENSGT00910000144250.cb #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097.i ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.q.a ##30 ENSGT00940000155226.q.b ##30 ENSGT00940000154832.n #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Cricetinae ANCESTRAL SPECIES 11 ENSGT00940000158072 ENSGT00940000158704 ENSGT00940000156106 ENSGT00660000095541.a.b ENSGT00940000161597 ENSGT00950000183148.a ENSGT00940000154071.A ENSGT00940000155959 ENSGT00940000155517 ENSGT00910000144250.cb #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097.i ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.q.a ##30 ENSGT00940000155226.q.b ##30 ENSGT00940000154832.n #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Golden Hamster MODERN SPECIES 652 Dmac2l (ENSMAUG00000020577) Cdkl1 (ENSMAUG00000020825) Map4k5 (ENSMAUG00000020655) Atl1 (ENSMAUG00000016977) Sav1 (ENSMAUG00000018575) Abhd12b (ENSMAUG00000011642) Pygl (ENSMAUG00000012424) Trim9 (ENSMAUG00000018818) ENSMAUG00000008858 Tmx1 (ENSMAUG00000011486) Frmd6 (ENSMAUG00000015963) ENSMAUG00000016337 #16 Psma3 (ENSMAUG00000020737) #17 Arid4a (ENSMAUG00000016160) #18 Tomm20l (ENSMAUG00000007310) Dact1 (ENSMAUG00000008693) #22 Daam1 (ENSMAUG00000003647) #24 L3hypdh (ENSMAUG00000008290) Jkamp (ENSMAUG00000013918) Ccdc175 (ENSMAUG00000012981) ENSMAUG00000016295 ##27 Lrrc9 (ENSMAUG00000002601) #28 Pcnx4 (ENSMAUG00000005473) #29 Gm4756 (ENSMAUG00000008532) ##30 ENSMAUG00000008159 ENSMAUG00000008077 Ppm1a (ENSMAUG00000021901) #32 4930447C04Rik (ENSMAUG00000016740) #34 Six6 (ENSMAUG00000008118) #35 Six1 (ENSMAUG00000018841) #36 Six4 (ENSMAUG00000013213) #37 Chinese hamster chok1gshd MODERN SPECIES 2 Atl1 (ENSCGRG00001015789) Sav1 (ENSCGRG00001014937) Nin (ENSCGRG00001020642) Abhd12b (ENSCGRG00001017992) Pygl (ENSCGRG00001020410) Trim9 (ENSCGRG00001003585) ENSCGRG00001000492 Tmx1 (ENSCGRG00001017821) Frmd6 (ENSCGRG00001014895) Actr10 (ENSCGRG00001021929) #16 Psma3 (ENSCGRG00001020109) #17 Arid4a (ENSCGRG00001018168) #18 Tomm20l (ENSCGRG00001017252) Timm9 (ENSCGRG00001006577) #20 2700049A03Rik (ENSCGRG00001014970) #21 Dact1 (ENSCGRG00001013082) #22 ENSCGRG00001009458 Daam1 (ENSCGRG00001023737) #24 Gpr135 (ENSCGRG00001011215) #25 L3hypdh (ENSCGRG00001016943) Jkamp (ENSCGRG00001015524) Rtn1 (ENSCGRG00001017706) ##27 Lrrc9 (ENSCGRG00001014760) #28 Pcnx4 (ENSCGRG00001003784) #29 Gm4756 (ENSCGRG00001023826) ##30 Dhrs7 (ENSCGRG00001021840) ##30 Ppm1a (ENSCGRG00001021488) #32 4930447C04Rik (ENSCGRG00001020319) #34 Six6 (ENSCGRG00001018924) #35 Six1 (ENSCGRG00001016794) #36 Six4 (ENSCGRG00001015581) #37 Cricetidae_B ANCESTRAL SPECIES 18 ENSGT00940000158072 ENSGT00940000158704 ENSGT00940000156106 ENSGT00660000095541.a.b ENSGT00940000161597 ENSGT00950000183148.a ENSGT00940000154071.A ENSGT00940000155959 ENSGT00940000155517 ENSGT00910000144250.cb #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097.i ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.q.a ##30 ENSGT00940000155226.q.b ##30 ENSGT00940000154832.n #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Prairie vole MODERN SPECIES Tmem30b (ENSMOCG00000002996) Slc38a6 (ENSMOCG00000012994) Trmt5 (ENSMOCG00000020904) Mnat1 (ENSMOCG00000021804) Abhd12b (ENSMOCG00000004427) Pygl (ENSMOCG00000019214) Trim9 (ENSMOCG00000017949) Tmx1 (ENSMOCG00000010006) Frmd6 (ENSMOCG00000002317) Actr10 (ENSMOCG00000001339) #16 Psma3 (ENSMOCG00000011319) #17 Arid4a (ENSMOCG00000010098) #18 Tomm20l (ENSMOCG00000002773) Timm9 (ENSMOCG00000001817) #20 ENSMOCG00000014334 #21 Dact1 (ENSMOCG00000016254) #22 Daam1 (ENSMOCG00000019057) #24 Gpr135 (ENSMOCG00000012134) #25 L3hypdh (ENSMOCG00000022649) Jkamp (ENSMOCG00000022061) Ccdc175 (ENSMOCG00000018926) ENSMOCG00000017923 ##27 Lrrc9 (ENSMOCG00000017244) #28 Pcnx4 (ENSMOCG00000007196) #29 Gm4756 (ENSMOCG00000021237) ##30 Dhrs7 (ENSMOCG00000017844) ##30 ENSMOCG00000013291 #32 ENSMOCG00000000739 ENSMOCG00000008746 Six6 (ENSMOCG00000001167) #35 Six1 (ENSMOCG00000000863) #36 Northern American deer mouse MODERN SPECIES 5 Slc26a4 (ENSPEMG00000022017) ENSPEMG00000030286 Cbll1 (ENSPEMG00000016994) Slc26a3 (ENSPEMG00000017953) Dld (ENSPEMG00000023398) Lamb1 (ENSPEMG00000023873) ENSPEMG00000015911 ENSPEMG00000028645 Actr10 (ENSPEMG00000017118) #16 Psma3 (ENSPEMG00000015781) #17 Arid4a (ENSPEMG00000008231) #18 ENSPEMG00000025117 Tomm20l (ENSPEMG00000009988) Timm9 (ENSPEMG00000029097) #20 2700049A03Rik (ENSPEMG00000008923) #21 Dact1 (ENSPEMG00000015114) #22 ENSPEMG00000027832 Daam1 (ENSPEMG00000007798) #24 Gpr135 (ENSPEMG00000013964) #25 L3hypdh (ENSPEMG00000013509) Jkamp (ENSPEMG00000003920) Ccdc175 (ENSPEMG00000025864) Rtn1 (ENSPEMG00000014989) ##27 Lrrc9 (ENSPEMG00000018166) #28 Pcnx4 (ENSPEMG00000012337) #29 ENSPEMG00000010519 ##30 Dhrs7 (ENSPEMG00000022404) ##30 ENSPEMG00000022755 #32 4930447C04Rik (ENSPEMG00000022526) #34 Six6 (ENSPEMG00000023894) #35 Six1 (ENSPEMG00000023303) #36 Murinae ANCESTRAL SPECIES 8 ENSGT00940000158704 ENSGT00940000156106 ENSGT00660000095541.a.b ENSGT00940000161597 ENSGT00950000183148.a ENSGT00940000154071.A ENSGT00940000155959 ENSGT00940000155517 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT01050000248157 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097.i ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.q.a ##30 ENSGT00940000155226.q.b ##30 ENSGT00940000154832.n #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Mus ANCESTRAL SPECIES 10 ENSGT00940000158704 ENSGT00940000156106 ENSGT00660000095541.a.b ENSGT00940000161597 ENSGT00950000183148.a ENSGT00940000154071.A ENSGT00940000155959 ENSGT00940000155517 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT01050000248157 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097.i ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.q.a ##30 ENSGT00940000155226.q.b ##30 ENSGT00940000154832.n #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Mus_A ANCESTRAL SPECIES 17 ENSGT00940000153556.A.g.b ENSGT00940000156106 ENSGT00660000095541.a.b ENSGT00940000161597 ENSGT00950000183148.a ENSGT00940000154071.A ENSGT00940000155959 ENSGT00940000155517 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT01050000248157 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097.i ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.q.a ##30 ENSGT00940000155226.q.b ##30 ENSGT00940000154832.n #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Mus_B ANCESTRAL SPECIES 17 ENSGT00940000153556.A.g.b ENSGT00940000156106 ENSGT00660000095541.a.b ENSGT00940000161597 ENSGT00950000183148.a ENSGT00940000154071.A ENSGT00940000155959 ENSGT00940000155517 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT01050000248157 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097.i ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.q.a ##30 ENSGT00940000155226.q.b ##30 ENSGT00940000154832.n #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Mus_C ANCESTRAL SPECIES 11 ENSGT00940000153556.A.g.b ENSGT00940000156106 ENSGT00660000095541.a.b ENSGT00940000161597 ENSGT00950000183148.a ENSGT00940000154071.A ENSGT00940000155959 ENSGT00940000155517 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT01050000248157 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097.i ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.q.a ##30 ENSGT00940000155226.q.b ##30 ENSGT00940000154832.n #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Steppe mouse MODERN SPECIES 2647 Actr10 (ENSMSIG00000013779) #16 ENSMSIG00000013811 #17 ENSMSIG00000013858 Arid4a (ENSMSIG00000013874) #18 ENSMSIG00000013930 Timm9 (ENSMSIG00000013942) #20 2700049A03Rik (ENSMSIG00000014009) #21 Dact1 (ENSMSIG00000014186) #22 spretus MODERN SPECIES 3 Atl1 (MGP_SPRETEiJ_G0018658) MGP_SPRETEiJ_G0018659 Sav1 (MGP_SPRETEiJ_G0018660) Nin (MGP_SPRETEiJ_G0018661) Abhd12b (MGP_SPRETEiJ_G0018662) Pygl (MGP_SPRETEiJ_G0018663) Trim9 (MGP_SPRETEiJ_G0018664) Tmx1 (MGP_SPRETEiJ_G0018665) Frmd6 (MGP_SPRETEiJ_G0018666) Actr10 (MGP_SPRETEiJ_G0018667) #16 Psma3 (MGP_SPRETEiJ_G0018668) #17 Arid4a (MGP_SPRETEiJ_G0018669) #18 Tomm20l (MGP_SPRETEiJ_G0018670) Timm9 (MGP_SPRETEiJ_G0018671) #20 2700049A03Rik (MGP_SPRETEiJ_G0018672) #21 Dact1 (MGP_SPRETEiJ_G0018673) #22 Daam1 (MGP_SPRETEiJ_G0018674) #24 Gpr135 (MGP_SPRETEiJ_G0018675) #25 L3hypdh (MGP_SPRETEiJ_G0018676) Jkamp (MGP_SPRETEiJ_G0018677) Ccdc175 (MGP_SPRETEiJ_G0018678) Rtn1 (MGP_SPRETEiJ_G0018679) ##27 Lrrc9 (MGP_SPRETEiJ_G0018680) #28 Pcnx4 (MGP_SPRETEiJ_G0018681) #29 MGP_SPRETEiJ_G0018682 ##30 Dhrs7 (MGP_SPRETEiJ_G0018683) ##30 MGP_SPRETEiJ_G0018684 #32 4930447C04Rik (MGP_SPRETEiJ_G0018685) #34 Six6 (MGP_SPRETEiJ_G0018686) #35 Six1 (MGP_SPRETEiJ_G0018687) #36 Six4 (MGP_SPRETEiJ_G0018688) #37 Mouse MODERN SPECIES 3 Map4k5 (ENSMUSG00000034761) Atl1 (ENSMUSG00000021066) Sav1 (ENSMUSG00000021067) Nin (ENSMUSG00000021068) Abhd12b (ENSMUSG00000090121) Pygl (ENSMUSG00000021069) Trim9 (ENSMUSG00000021071) Tmx1 (ENSMUSG00000021072) Frmd6 (ENSMUSG00000048285) Actr10 (ENSMUSG00000021076) #16 Psma3 (ENSMUSG00000060073) #17 Arid4a (ENSMUSG00000048118) #18 Tomm20l (ENSMUSG00000021078) Timm9 (ENSMUSG00000021079) #20 2700049A03Rik (ENSMUSG00000034601) #21 Dact1 (ENSMUSG00000044548) #22 Daam1 (ENSMUSG00000034574) #24 Gpr135 (ENSMUSG00000043398) #25 L3hypdh (ENSMUSG00000019718) Jkamp (ENSMUSG00000005078) Ccdc175 (ENSMUSG00000021086) Rtn1 (ENSMUSG00000021087) ##27 Lrrc9 (ENSMUSG00000021090) #28 Pcnx4 (ENSMUSG00000034501) #29 Gm4756 (ENSMUSG00000109482) ##30 Dhrs7 (ENSMUSG00000021094) ##30 Ppm1a (ENSMUSG00000021096) #32 4930447C04Rik (ENSMUSG00000021098) #34 Six6 (ENSMUSG00000021099) #35 Six1 (ENSMUSG00000051367) #36 Six4 (ENSMUSG00000034460) #37 Ryukyu mouse MODERN SPECIES 3 Atl1 (MGP_CAROLIEiJ_G0017813) MGP_CAROLIEiJ_G0017814 Sav1 (MGP_CAROLIEiJ_G0017815) Nin (MGP_CAROLIEiJ_G0017816) Abhd12b (MGP_CAROLIEiJ_G0017817) Pygl (MGP_CAROLIEiJ_G0017818) Trim9 (MGP_CAROLIEiJ_G0017819) Tmx1 (MGP_CAROLIEiJ_G0017820) Frmd6 (MGP_CAROLIEiJ_G0017821) Actr10 (MGP_CAROLIEiJ_G0017822) #16 Psma3 (MGP_CAROLIEiJ_G0017823) #17 Arid4a (MGP_CAROLIEiJ_G0017824) #18 Tomm20l (MGP_CAROLIEiJ_G0017825) MGP_CAROLIEiJ_G0017826 #20 2700049A03Rik (MGP_CAROLIEiJ_G0017827) #21 Dact1 (MGP_CAROLIEiJ_G0017828) #22 Daam1 (MGP_CAROLIEiJ_G0017829) #24 Gpr135 (MGP_CAROLIEiJ_G0017830) #25 L3hypdh (MGP_CAROLIEiJ_G0017831) Jkamp (MGP_CAROLIEiJ_G0017832) MGP_CAROLIEiJ_G0017833 Rtn1 (MGP_CAROLIEiJ_G0017834) ##27 Lrrc9 (MGP_CAROLIEiJ_G0017835) #28 Pcnx4 (MGP_CAROLIEiJ_G0017836) #29 Dhrs7 (MGP_CAROLIEiJ_G0017837) ##30 4930447C04Rik (MGP_CAROLIEiJ_G0017838) #34 Six6 (MGP_CAROLIEiJ_G0017839) #35 Six1 (MGP_CAROLIEiJ_G0017840) #36 Six4 (MGP_CAROLIEiJ_G0017841) #37 Mnat1 (MGP_CAROLIEiJ_G0017842) Trmt5 (MGP_CAROLIEiJ_G0017843) Shrew mouse MODERN SPECIES 20 Atl1 (MGP_PahariEiJ_G0029569) MGP_PahariEiJ_G0029570 Sav1 (MGP_PahariEiJ_G0029571) Nin (MGP_PahariEiJ_G0029572) Abhd12b (MGP_PahariEiJ_G0029573) Pygl (MGP_PahariEiJ_G0029574) Trim9 (MGP_PahariEiJ_G0029575) Tmx1 (MGP_PahariEiJ_G0029576) Frmd6 (MGP_PahariEiJ_G0029577) Actr10 (MGP_PahariEiJ_G0029578) #16 Psma3 (MGP_PahariEiJ_G0029579) #17 Arid4a (MGP_PahariEiJ_G0029580) #18 Tomm20l (MGP_PahariEiJ_G0029581) Timm9 (MGP_PahariEiJ_G0029582) #20 2700049A03Rik (MGP_PahariEiJ_G0029583) #21 Dact1 (MGP_PahariEiJ_G0029584) #22 Daam1 (MGP_PahariEiJ_G0029585) #24 Gpr135 (MGP_PahariEiJ_G0029586) #25 L3hypdh (MGP_PahariEiJ_G0029587) Jkamp (MGP_PahariEiJ_G0029588) Ccdc175 (MGP_PahariEiJ_G0029589) Rtn1 (MGP_PahariEiJ_G0029590) ##27 Lrrc9 (MGP_PahariEiJ_G0029591) #28 Pcnx4 (MGP_PahariEiJ_G0029592) #29 MGP_PahariEiJ_G0029593 ##30 MGP_PahariEiJ_G0029594 Ppm1a (MGP_PahariEiJ_G0029595) #32 4930447C04Rik (MGP_PahariEiJ_G0029596) #34 Six6 (MGP_PahariEiJ_G0029597) #35 Six1 (MGP_PahariEiJ_G0029598) #36 Six4 (MGP_PahariEiJ_G0029599) #37 Rat MODERN SPECIES 16 Atl1 (ENSRNOG00000005063) Sav1 (ENSRNOG00000005264) Nin (ENSRNOG00000005540) Abhd12b (ENSRNOG00000026855) Pygl (ENSRNOG00000006388) Trim9 (ENSRNOG00000007031) Tmx1 (ENSRNOG00000057934) Frmd6 (ENSRNOG00000007329) Actr10 (ENSRNOG00000007504) #16 Psma3 (ENSRNOG00000007851) #17 ENSRNOG00000062478 Arid4a (ENSRNOG00000026239) #18 Tomm20l (ENSRNOG00000054663) Timm9 (ENSRNOG00000008222) #20 LOC690035 (ENSRNOG00000008244) #21 Dact1 (ENSRNOG00000008445) #22 AABR07064753.1 (ENSRNOG00000032924) Daam1 (ENSRNOG00000004345) #24 Gpr135 (ENSRNOG00000004499) #25 L3hypdh (ENSRNOG00000004503) AABR07047593.1 (ENSRNOG00000006971) Jkamp (ENSRNOG00000004751) Ccdc175 (ENSRNOG00000004774) Rtn1 (ENSRNOG00000004794) ##27 ENSRNOG00000068248 Lrrc9 (ENSRNOG00000005409) #28 AABR07064804.1 (ENSRNOG00000005568) #29 LOC120093108 (ENSRNOG00000067058) ##30 Dhrs7 (ENSRNOG00000005589) ##30 Dhrs7l1 (ENSRNOG00000025648) ##30 LOC100361944 (ENSRNOG00000029172) Upper Galilee mountains blind mole rat MODERN SPECIES 1068 Tmem260 (ENSNGAG00000001126) #8 Otx2 (ENSNGAG00000015521) #9 Exoc5 (ENSNGAG00000000258) #10 Ap5m1 (ENSNGAG00000010113) #11 Naa30 (ENSNGAG00000007396) #12 ccdc198 (ENSNGAG00000016223) #13 Slc35f4 (ENSNGAG00000017272) #14 Armh4 (ENSNGAG00000008903) #15 ENSNGAG00000019693 Actr10 (ENSNGAG00000020352) #16 ENSNGAG00000012537 #17 Arid4a (ENSNGAG00000015701) #18 Timm9 (ENSNGAG00000012518) #20 2700049A03Rik (ENSNGAG00000018580) #21 ENSNGAG00000008848 Dact1 (ENSNGAG00000016582) #22 Daam1 (ENSNGAG00000011448) #24 Gpr135 (ENSNGAG00000018914) #25 ENSNGAG00000014758 L3hypdh (ENSNGAG00000011558) Jkamp (ENSNGAG00000011860) Ccdc175 (ENSNGAG00000017464) ENSNGAG00000007542 ##27 Lrrc9 (ENSNGAG00000000711) #28 Pcnx4 (ENSNGAG00000007598) #29 Gm4756 (ENSNGAG00000014268) ##30 Dhrs7 (ENSNGAG00000019713) ##30 Ppm1a (ENSNGAG00000018231) #32 4930447C04Rik (ENSNGAG00000016529) #34 Six6 (ENSNGAG00000011750) #35 Six1 (ENSNGAG00000004807) #36 Lesser Egyptian jerboa MODERN SPECIES 41 Peli2 (ENSJJAG00000003968) #7 Tmem260 (ENSJJAG00000012902) #8 Otx2 (ENSJJAG00000012995) #9 Exoc5 (ENSJJAG00000024175) #10 Ap5m1 (ENSJJAG00000011637) #11 Naa30 (ENSJJAG00000024025) #12 ccdc198 (ENSJJAG00000008303) #13 Slc35f4 (ENSJJAG00000001648) #14 ENSJJAG00000013603 Armh4 (ENSJJAG00000017470) #15 Actr10 (ENSJJAG00000018421) #16 ENSJJAG00000001749 #17 Arid4a (ENSJJAG00000016742) #18 Timm9 (ENSJJAG00000007980) #20 2700049A03Rik (ENSJJAG00000003167) #21 Dact1 (ENSJJAG00000023135) #22 Daam1 (ENSJJAG00000018690) #24 Gpr135 (ENSJJAG00000022088) #25 L3hypdh (ENSJJAG00000022907) ENSJJAG00000018222 ENSJJAG00000002864 ##27 Lrrc9 (ENSJJAG00000018313) #28 Pcnx4 (ENSJJAG00000010856) #29 ENSJJAG00000018132 ##30 ENSJJAG00000001040 Dhrs7 (ENSJJAG00000020161) ##30 ENSJJAG00000020601 #32 ENSJJAG00000014875 Six6 (ENSJJAG00000000807) #35 Six1 (ENSJJAG00000010515) #36 Six4 (ENSJJAG00000000414) #37 Lagomorpha ANCESTRAL SPECIES ENSGT00950000183181.B.a #22 Rabbit MODERN SPECIES 8 ENSOCUG00000000756 #10 AP5M1 (ENSOCUG00000009782) #11 NAA30 (ENSOCUG00000008997) #12 CCDC198 (ENSOCUG00000015402) #13 SLC35F4 (ENSOCUG00000000541) #14 ENSOCUG00000030253 CDC34 (ENSOCUG00000022563) ARMH4 (ENSOCUG00000012279) #15 ACTR10 (ENSOCUG00000003358) #16 PSMA3 (ENSOCUG00000010316) #17 ARID4A (ENSOCUG00000001052) #18 TOMM20L (ENSOCUG00000029717) TIMM9 (ENSOCUG00000007350) #20 KIAA0586 (ENSOCUG00000007145) #21 ENSOCUG00000025960 DACT1 (ENSOCUG00000015140) #22 TUBGCP5 (ENSOCUG00000010715) CYFIP1 (ENSOCUG00000010732) NIPA2 (ENSOCUG00000010746) NIPA1 (ENSOCUG00000010754) HERC2 (ENSOCUG00000006754) OCA2 (ENSOCUG00000003510) GABRG3 (ENSOCUG00000011584) ENSOCUG00000031543 GABRA5 (ENSOCUG00000012905) ENSOCUG00000029227 GABRB3 (ENSOCUG00000003638) ATP10A (ENSOCUG00000006386) ENSOCUG00000034404 UBE3A (ENSOCUG00000017465) ENSOCUG00000039001 Pika MODERN SPECIES 2982 ENSOPRG00000000303 #22 Tree shrew MODERN SPECIES 932 PSMA3 (ENSTBEG00000016910) #17 ARID4A (ENSTBEG00000017302) #18 TOMM20L (ENSTBEG00000009647) ENSTBEG00000009795 KIAA0586 (ENSTBEG00000010055) #21 DACT1 (ENSTBEG00000011285) #22 Primates ANCESTRAL SPECIES 2 ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Strepsirrhini ANCESTRAL SPECIES 2 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Lemuriformes ANCESTRAL SPECIES 28 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Mouse lemur MODERN SPECIES 22 TMEM260 (ENSMICG00000016993) #8 OTX2 (ENSMICG00000028939) #9 ENSMICG00000032375 EXOC5 (ENSMICG00000003597) #10 AP5M1 (ENSMICG00000034728) #11 NAA30 (ENSMICG00000030737) #12 CCDC198 (ENSMICG00000005297) #13 SLC35F4 (ENSMICG00000005305) #14 ARMH4 (ENSMICG00000001034) #15 ENSMICG00000028564 #16 PSMA3 (ENSMICG00000011559) #17 ARID4A (ENSMICG00000011761) #18 TOMM20L (ENSMICG00000046289) ENSMICG00000044245 #20 KIAA0586 (ENSMICG00000011796) #21 DACT1 (ENSMICG00000004813) #22 ENSMICG00000012461 #24 GPR135 (ENSMICG00000012482) #25 L3HYPDH (ENSMICG00000012485) JKAMP (ENSMICG00000012491) CCDC175 (ENSMICG00000012495) RTN1 (ENSMICG00000012512) #27 LRRC9 (ENSMICG00000037017) #28 PCNX4 (ENSMICG00000034043) #29 DHRS7 (ENSMICG00000012540) #30 MDGA2 (ENSMICG00000037394) MIS18BP1 (ENSMICG00000005844) FANCM (ENSMICG00000005811) FKBP3 (ENSMICG00000005808) PRPF39 (ENSMICG00000005802) TOGARAM1 (ENSMICG00000015705) Lemuriformes_a ANCESTRAL SPECIES 11 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Coquerels sifaka MODERN SPECIES 653 DACT1 (ENSPCOG00000028659) #22 DAAM1 (ENSPCOG00000026863) #24 L3HYPDH (ENSPCOG00000026037) JKAMP (ENSPCOG00000023039) CCDC175 (ENSPCOG00000015679) RTN1 (ENSPCOG00000025276) #27 LRRC9 (ENSPCOG00000019961) #28 PCNX4 (ENSPCOG00000003204) #29 DHRS7 (ENSPCOG00000027040) #30 PPM1A (ENSPCOG00000023841) #32 C14orf39 (ENSPCOG00000016983) #34 SIX6 (ENSPCOG00000015355) #35 SIX1 (ENSPCOG00000016308) #36 SIX4 (ENSPCOG00000024138) #37 MNAT1 (ENSPCOG00000019718) TRMT5 (ENSPCOG00000017447) Greater bamboo lemur MODERN SPECIES 228 ENSPSMG00000025831 ACTR10 (ENSPSMG00000025830) #16 PSMA3 (ENSPSMG00000025829) #17 ARID4A (ENSPSMG00000025820) #18 TOMM20L (ENSPSMG00000025815) TIMM9 (ENSPSMG00000025813) #20 KIAA0586 (ENSPSMG00000025808) #21 DACT1 (ENSPSMG00000025802) #22 ENSPSMG00000025801 DAAM1 (ENSPSMG00000025800) #24 GPR135 (ENSPSMG00000025798) #25 L3HYPDH (ENSPSMG00000025797) JKAMP (ENSPSMG00000025795) CCDC175 (ENSPSMG00000025792) RTN1 (ENSPSMG00000025787) #27 LRRC9 (ENSPSMG00000025773) #28 PCNX4 (ENSPSMG00000025766) #29 DHRS7 (ENSPSMG00000025761) #30 PPM1A (ENSPSMG00000025758) #32 C14orf39 (ENSPSMG00000025754) #34 SIX6 (ENSPSMG00000025751) #35 SIX1 (ENSPSMG00000025749) #36 SIX4 (ENSPSMG00000025746) #37 Bushbaby MODERN SPECIES 196 TMEM260 (ENSOGAG00000006976) #8 OTX2 (ENSOGAG00000006981) #9 EXOC5 (ENSOGAG00000014948) #10 AP5M1 (ENSOGAG00000014952) #11 ENSOGAG00000031518 NAA30 (ENSOGAG00000017020) #12 CCDC198 (ENSOGAG00000017021) #13 SLC35F4 (ENSOGAG00000008907) #14 ARMH4 (ENSOGAG00000013277) #15 ENSOGAG00000000380 #16 PSMA3 (ENSOGAG00000000382) #17 ARID4A (ENSOGAG00000000385) #18 TOMM20L (ENSOGAG00000002471) ENSOGAG00000002472 #20 KIAA0586 (ENSOGAG00000002474) #21 DACT1 (ENSOGAG00000027814) #22 ENSOGAG00000025505 DAAM1 (ENSOGAG00000004895) #24 L3HYPDH (ENSOGAG00000032453) JKAMP (ENSOGAG00000014225) ENSOGAG00000026652 #27 ENSOGAG00000029809 #27 LRRC9 (ENSOGAG00000004972) #28 PCNX4 (ENSOGAG00000034035) #29 DHRS7 (ENSOGAG00000006360) #30 PPM1A (ENSOGAG00000003689) #32 C14orf39 (ENSOGAG00000005798) #34 SIX6 (ENSOGAG00000033548) #35 SIX1 (ENSOGAG00000012932) #36 SIX4 (ENSOGAG00000016082) #37 MNAT1 (ENSOGAG00000016085) Haplorrhini ANCESTRAL SPECIES 12 ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Simiiformes ANCESTRAL SPECIES 2 ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Catarrhini ANCESTRAL SPECIES 9 ENSGT00940000155014 #9 ENSGT00390000017606.a.a.i.b.a.a.f.b ENSGT00390000004745 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00390000012062.n ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 Hominoidea ANCESTRAL SPECIES 12 ENSGT00940000155014 #9 ENSGT00390000017606.a.a.i.b.a.a.f.b ENSGT00390000004745 ENSGT00390000012837.e #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00390000012062.n ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 Hominidae ANCESTRAL SPECIES 14 ENSGT00940000155014 #9 ENSGT00390000017606.a.a.i.b.a.a.f.b ENSGT00390000004745 ENSGT00390000012837.e #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00390000012062.n ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 12 ENSGT00940000155014 #9 ENSGT00390000017606.a.a.i.b.a.a.f.b ENSGT00390000004745 ENSGT00390000012837.e #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00390000012062.n ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 Gorilla MODERN SPECIES 5 ENSGGOG00000040841 TMEM260 (ENSGGOG00000015629) #8 OTX2 (ENSGGOG00000004038) #9 ENSGGOG00000025246 ENSGGOG00000023022 #10 AP5M1 (ENSGGOG00000005710) #11 CCDC198 (ENSGGOG00000022506) #13 SLC35F4 (ENSGGOG00000015232) #14 ARMH4 (ENSGGOG00000012037) #15 ACTR10 (ENSGGOG00000006866) #16 PSMA3 (ENSGGOG00000015814) #17 ARID4A (ENSGGOG00000027092) #18 TOMM20L (ENSGGOG00000001739) TIMM9 (ENSGGOG00000037703) #20 KIAA0586 (ENSGGOG00000023197) #21 DACT1 (ENSGGOG00000015389) #22 ENSGGOG00000023777 DAAM1 (ENSGGOG00000012922) #24 L3HYPDH (ENSGGOG00000002461) JKAMP (ENSGGOG00000002463) CCDC175 (ENSGGOG00000002465) RTN1 (ENSGGOG00000005855) #27 LRRC9 (ENSGGOG00000003571) #28 PCNX4 (ENSGGOG00000027487) #29 DHRS7 (ENSGGOG00000008367) #30 ENSGGOG00000023336 PPM1A (ENSGGOG00000010082) #32 C14orf39 (ENSGGOG00000010643) #34 SIX6 (ENSGGOG00000008594) #35 SIX1 (ENSGGOG00000001388) #36 SIX4 (ENSGGOG00000010018) #37 Homo/Pan group ANCESTRAL SPECIES 11 ENSGT00940000155014 #9 ENSGT00390000017606.a.a.i.b.a.a.f.b ENSGT00390000004745 ENSGT00390000012837.e #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00390000012062.n ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 Pan ANCESTRAL SPECIES 8 ENSGT00940000155014 #9 ENSGT00390000017606.a.a.i.b.a.a.f.b ENSGT00390000004745 ENSGT00390000012837.e #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00390000012062.n ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Chimpanzee MODERN SPECIES 5 TMEM260 (ENSPTRG00000006380) #8 OTX2 (ENSPTRG00000006381) #9 EXOC5 (ENSPTRG00000023297) #10 ENSPTRG00000052098 AP5M1 (ENSPTRG00000006384) #11 NAA30 (ENSPTRG00000006385) #12 CCDC198 (ENSPTRG00000006386) #13 SLC35F4 (ENSPTRG00000006387) #14 ARMH4 (ENSPTRG00000006388) #15 ACTR10 (ENSPTRG00000006389) #16 PSMA3 (ENSPTRG00000006390) #17 ARID4A (ENSPTRG00000006393) #18 TOMM20L (ENSPTRG00000024265) TIMM9 (ENSPTRG00000006394) #20 KIAA0586 (ENSPTRG00000006395) #21 DACT1 (ENSPTRG00000006397) #22 ENSPTRG00000049547 DAAM1 (ENSPTRG00000006398) #24 GPR135 (ENSPTRG00000052380) #25 L3HYPDH (ENSPTRG00000006399) CCDC175 (ENSPTRG00000006401) JKAMP (ENSPTRG00000006400) RTN1 (ENSPTRG00000006402) #27 LRRC9 (ENSPTRG00000045558) #28 PCNX4 (ENSPTRG00000006405) #29 DHRS7 (ENSPTRG00000006406) #30 ENSPTRG00000048791 ENSPTRG00000046575 PPM1A (ENSPTRG00000006407) #32 C14H14orf39 (ENSPTRG00000006408) #34 SIX6 (ENSPTRG00000006409) #35 Bonobo MODERN SPECIES 5 ENSPPAG00000016433 ENSPPAG00000027283 ENSPPAG00000033104 EXOC5 (ENSPPAG00000035633) #10 AP5M1 (ENSPPAG00000040615) #11 ENSPPAG00000039070 #12 CCDC198 (ENSPPAG00000035537) #13 SLC35F4 (ENSPPAG00000031826) #14 ARMH4 (ENSPPAG00000040474) #15 ACTR10 (ENSPPAG00000038910) #16 PSMA3 (ENSPPAG00000035468) #17 ARID4A (ENSPPAG00000042713) #18 TOMM20L (ENSPPAG00000043904) TIMM9 (ENSPPAG00000028624) #20 KIAA0586 (ENSPPAG00000035450) #21 DACT1 (ENSPPAG00000034602) #22 ENSPPAG00000032063 DAAM1 (ENSPPAG00000030494) #24 GPR135 (ENSPPAG00000036264) #25 L3HYPDH (ENSPPAG00000039237) JKAMP (ENSPPAG00000038556) CCDC175 (ENSPPAG00000039911) ENSPPAG00000040880 ##27 ENSPPAG00000030154 ##27 LRRC9 (ENSPPAG00000028312) #28 PCNX4 (ENSPPAG00000031111) #29 DHRS7 (ENSPPAG00000025681) #30 ENSPPAG00000032426 PPM1A (ENSPPAG00000035582) #32 C14orf39 (ENSPPAG00000034713) #34 SIX6 (ENSPPAG00000043989) #35 Human MODERN SPECIES 5 PELI2 (ENSG00000139946) #7 TMEM260 (ENSG00000070269) #8 OTX2 (ENSG00000165588) #9 EXOC5 (ENSG00000070367) #10 AP5M1 (ENSG00000053770) #11 NAA30 (ENSG00000139977) #12 CCDC198 (ENSG00000100557) #13 SLC35F4 (ENSG00000151812) #14 ARMH4 (ENSG00000139971) #15 ACTR10 (ENSG00000131966) #16 PSMA3 (ENSG00000100567) #17 ARID4A (ENSG00000032219) #18 TOMM20L (ENSG00000196860) TIMM9 (ENSG00000100575) #20 KIAA0586 (ENSG00000100578) #21 DACT1 (ENSG00000165617) #22 DAAM1 (ENSG00000100592) #24 GPR135 (ENSG00000181619) #25 L3HYPDH (ENSG00000126790) JKAMP (ENSG00000050130) CCDC175 (ENSG00000151838) RTN1 (ENSG00000139970) #27 LRRC9 (ENSG00000131951) #28 PCNX4 (ENSG00000126773) #29 DHRS7 (ENSG00000100612) #30 PPM1A (ENSG00000100614) #32 C14orf39 (ENSG00000179008) #34 SIX6 (ENSG00000184302) #35 SIX1 (ENSG00000126778) #36 SIX4 (ENSG00000100625) #37 MNAT1 (ENSG00000020426) Orangutan MODERN SPECIES 5 TMEM260 (ENSPPYG00000040522) #8 OTX2 (ENSPPYG00000005846) #9 ENSPPYG00000005847 EXOC5 (ENSPPYG00000005848) #10 AP5M1 (ENSPPYG00000005849) #11 NAA30 (ENSPPYG00000005850) #12 CCDC198 (ENSPPYG00000005851) #13 SLC35F4 (ENSPPYG00000005852) #14 ARMH4 (ENSPPYG00000005853) #15 ACTR10 (ENSPPYG00000005854) #16 PSMA3 (ENSPPYG00000005855) #17 ARID4A (ENSPPYG00000005857) #18 ENSPPYG00000005858 TIMM9 (ENSPPYG00000005859) #20 KIAA0586 (ENSPPYG00000005860) #21 DACT1 (ENSPPYG00000005861) #22 ENSPPYG00000032789 DAAM1 (ENSPPYG00000005862) #24 L3HYPDH (ENSPPYG00000005864) ENSPPYG00000040391 JKAMP (ENSPPYG00000005865) CCDC175 (ENSPPYG00000005866) RTN1 (ENSPPYG00000005867) #27 LRRC9 (ENSPPYG00000005868) #28 PCNX4 (ENSPPYG00000005869) #29 DHRS7 (ENSPPYG00000005870) #30 PPM1A (ENSPPYG00000005871) #32 C14orf39 (ENSPPYG00000005872) #34 SIX6 (ENSPPYG00000031183) #35 SIX1 (ENSPPYG00000005874) #36 SIX4 (ENSPPYG00000005875) #37 Gibbon MODERN SPECIES 10 OTX2 (ENSNLEG00000012999) #9 ENSNLEG00000036263 ENSNLEG00000031520 EXOC5 (ENSNLEG00000013004) #10 AP5M1 (ENSNLEG00000013007) #11 NAA30 (ENSNLEG00000013016) #12 ENSNLEG00000013023 #13 SLC35F4 (ENSNLEG00000013028) #14 ARMH4 (ENSNLEG00000013033) #15 ACTR10 (ENSNLEG00000013052) #16 PSMA3 (ENSNLEG00000013092) #17 ARID4A (ENSNLEG00000013149) #18 TOMM20L (ENSNLEG00000013279) TIMM9 (ENSNLEG00000036192) #20 KIAA0586 (ENSNLEG00000013301) #21 DACT1 (ENSNLEG00000013400) #22 ENSNLEG00000006038 DAAM1 (ENSNLEG00000013412) #24 L3HYPDH (ENSNLEG00000013439) JKAMP (ENSNLEG00000013451) CCDC175 (ENSNLEG00000013507) RTN1 (ENSNLEG00000013528) #27 LRRC9 (ENSNLEG00000013643) #28 PCNX4 (ENSNLEG00000013667) #29 DHRS7 (ENSNLEG00000013686) #30 PPM1A (ENSNLEG00000013715) #32 C14orf39 (ENSNLEG00000013735) #34 SIX6 (ENSNLEG00000013765) #35 SIX1 (ENSNLEG00000013774) #36 MNAT1 (ENSNLEG00000013781) ENSNLEG00000029817 Cercopithecidae ANCESTRAL SPECIES 7 ENSGT00390000017606.a.a.i.b.a.a.f.b ENSGT00390000004745 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912.i.b #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00940000163252.d ENSGT00950000183181.B.a #22 ENSGT00390000012062.n ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 Cercopithecinae ANCESTRAL SPECIES 2 ENSGT00940000155014 #9 ENSGT00390000004745 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912.i.b #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00940000163252.d ENSGT00950000183181.B.a #22 ENSGT00390000012062.n ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00940000155014 #9 ENSGT00390000004745 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912.i.b #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00940000163252.d ENSGT00950000183181.B.a #22 ENSGT00390000012062.n ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00390000005569.x.a.b.b.a.b.a ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Macaca ANCESTRAL SPECIES 1 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912.j #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00390000012062.n ENSGT00940000156452 #24 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00390000005569.x.a.b.b.a.b.a ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Pig-tailed macaque MODERN SPECIES 520 PELI2 (ENSMNEG00000035098) #7 TMEM260 (ENSMNEG00000034019) #8 OTX2 (ENSMNEG00000043694) #9 EXOC5 (ENSMNEG00000044093) #10 AP5M1 (ENSMNEG00000030435) #11 NAA30 (ENSMNEG00000039048) #12 CCDC198 (ENSMNEG00000034304) #13 SLC35F4 (ENSMNEG00000034879) #14 ARMH4 (ENSMNEG00000044040) #15 ACTR10 (ENSMNEG00000031228) #16 PSMA3 (ENSMNEG00000035144) #17 ARID4A (ENSMNEG00000037476) #18 TOMM20L (ENSMNEG00000034572) TIMM9 (ENSMNEG00000039326) #20 KIAA0586 (ENSMNEG00000029338) #21 DACT1 (ENSMNEG00000029558) #22 ENSMNEG00000013460 DAAM1 (ENSMNEG00000022401) #24 L3HYPDH (ENSMNEG00000040276) JKAMP (ENSMNEG00000044876) CCDC175 (ENSMNEG00000035042) RTN1 (ENSMNEG00000029694) #27 ENSMNEG00000013897 LRRC9 (ENSMNEG00000044254) #28 PCNX4 (ENSMNEG00000042532) #29 DHRS7 (ENSMNEG00000033351) #30 PPM1A (ENSMNEG00000042778) #32 C14orf39 (ENSMNEG00000013292) #34 SIX6 (ENSMNEG00000036336) #35 SIX1 (ENSMNEG00000038756) #36 SIX4 (ENSMNEG00000002832) #37 Macaca_a ANCESTRAL SPECIES 2 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912.j #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT01100000263539.b.a.a.a.a.a.b.a.b.a.a.b ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT01100000263539.b.b.b.b.b.a.b.b ENSGT00940000156452 #24 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00390000005569.x.a.b.b.a.b.a ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Rhesus MODERN SPECIES 17 OTX2 (ENSMMUG00000038006) #9 ENSMMUG00000062765 EXOC5 (ENSMMUG00000018278) #10 AP5M1 (ENSMMUG00000018279) #11 NAA30 (ENSMMUG00000021311) #12 CCDC198 (ENSMMUG00000040110) #13 SLC35F4 (ENSMMUG00000007646) #14 ARMH4 (ENSMMUG00000002121) #15 ACTR10 (ENSMMUG00000003508) #16 PSMA3 (ENSMMUG00000003509) #17 ARID4A (ENSMMUG00000003514) #18 ENSMMUG00000058671 TOMM20L (ENSMMUG00000055678) ENSMMUG00000049718 KIAA0586 (ENSMMUG00000001084) #21 DACT1 (ENSMMUG00000001090) #22 ENSMMUG00000059927 DAAM1 (ENSMMUG00000021070) #24 L3HYPDH (ENSMMUG00000008717) JKAMP (ENSMMUG00000008715) CCDC175 (ENSMMUG00000011965) RTN1 (ENSMMUG00000011966) #27 ENSMMUG00000029338 LRRC9 (ENSMMUG00000004854) #28 PCNX4 (ENSMMUG00000015443) #29 DHRS7 (ENSMMUG00000002540) #30 PPM1A (ENSMMUG00000010464) #32 C7H14orf39 (ENSMMUG00000002828) #34 SIX6 (ENSMMUG00000055613) #35 SIX1 (ENSMMUG00000058852) #36 SIX4 (ENSMMUG00000001640) #37 Crab-eating macaque MODERN SPECIES 17 OTX2 (ENSMFAG00000033859) #9 ENSMFAG00000060450 EXOC5 (ENSMFAG00000037256) #10 AP5M1 (ENSMFAG00000036074) #11 NAA30 (ENSMFAG00000038073) #12 CCDC198 (ENSMFAG00000044693) #13 SLC35F4 (ENSMFAG00000001572) #14 ARMH4 (ENSMFAG00000038183) #15 ACTR10 (ENSMFAG00000012469) #16 ENSMFAG00000002833 #17 ARID4A (ENSMFAG00000037044) #18 TOMM20L (ENSMFAG00000036395) ENSMFAG00000002017 KIAA0586 (ENSMFAG00000041990) #21 ENSMFAG00000063651 DACT1 (ENSMFAG00000057175) #22 ENSMFAG00000058398 ENSMFAG00000057070 DAAM1 (ENSMFAG00000030743) #24 L3HYPDH (ENSMFAG00000037589) JKAMP (ENSMFAG00000001385) CCDC175 (ENSMFAG00000043449) ENSMFAG00000031365 ##27 ENSMFAG00000035715 LRRC9 (ENSMFAG00000041739) #28 PCNX4 (ENSMFAG00000032543) #29 DHRS7 (ENSMFAG00000031332) #30 PPM1A (ENSMFAG00000001498) #32 C14orf39 (ENSMFAG00000040949) #34 SIX6 (ENSMFAG00000038361) #35 SIX1 (ENSMFAG00000048802) #36 Cercopithecinae_b ANCESTRAL SPECIES 8 ENSGT00940000155014 #9 ENSGT00390000004745 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912.i.b #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00940000163252.d ENSGT00950000183181.B.a #22 ENSGT00390000012062.n ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00390000005569.x.a.b.b.a.b.a ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Cercopithecinae_d ANCESTRAL SPECIES 28 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912.i.b #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00940000163252.d ENSGT00950000183181.B.a #22 ENSGT00390000012062.n ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00550000074801.h.c.b.b ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Sooty mangabey MODERN SPECIES 659 OTX2 (ENSCATG00000041601) #9 EXOC5 (ENSCATG00000037587) #10 ENSCATG00000039283 AP5M1 (ENSCATG00000044165) #11 NAA30 (ENSCATG00000013934) #12 CCDC198 (ENSCATG00000004038) #13 SLC35F4 (ENSCATG00000009372) #14 ARMH4 (ENSCATG00000040941) #15 ACTR10 (ENSCATG00000031164) #16 PSMA3 (ENSCATG00000039369) #17 ARID4A (ENSCATG00000041635) #18 TOMM20L (ENSCATG00000030084) TIMM9 (ENSCATG00000043351) #20 KIAA0586 (ENSCATG00000030156) #21 ENSCATG00000039885 DACT1 (ENSCATG00000031549) #22 ENSCATG00000043194 DAAM1 (ENSCATG00000033906) #24 GPR135 (ENSCATG00000010909) #25 L3HYPDH (ENSCATG00000032893) JKAMP (ENSCATG00000039039) CCDC175 (ENSCATG00000032497) RTN1 (ENSCATG00000038947) #27 LRRC9 (ENSCATG00000032425) #28 PCNX4 (ENSCATG00000043654) #29 DHRS7 (ENSCATG00000029538) #30 PPM1A (ENSCATG00000038430) #32 ENSCATG00000039628 C14orf39 (ENSCATG00000041613) #34 SIX6 (ENSCATG00000037533) #35 SIX1 (ENSCATG00000041483) #36 Drill MODERN SPECIES 1015 OTX2 (ENSMLEG00000032254) #9 ENSMLEG00000028109 EXOC5 (ENSMLEG00000040551) #10 AP5M1 (ENSMLEG00000033403) #11 NAA30 (ENSMLEG00000037545) #12 CCDC198 (ENSMLEG00000033090) #13 SLC35F4 (ENSMLEG00000043669) #14 ARMH4 (ENSMLEG00000032945) #15 ACTR10 (ENSMLEG00000029781) #16 PSMA3 (ENSMLEG00000041984) #17 ARID4A (ENSMLEG00000043095) #18 TOMM20L (ENSMLEG00000036424) ENSMLEG00000042516 ENSMLEG00000044131 KIAA0586 (ENSMLEG00000040931) #21 DACT1 (ENSMLEG00000040877) #22 ENSMLEG00000037984 DAAM1 (ENSMLEG00000040046) #24 GPR135 (ENSMLEG00000027679) #25 L3HYPDH (ENSMLEG00000031040) JKAMP (ENSMLEG00000027459) CCDC175 (ENSMLEG00000031273) RTN1 (ENSMLEG00000043571) #27 Olive baboon MODERN SPECIES 17 EXOC5 (ENSPANG00000022394) #10 AP5M1 (ENSPANG00000017145) #11 ENSPANG00000037169 NAA30 (ENSPANG00000024264) #12 CCDC198 (ENSPANG00000022393) #13 SLC35F4 (ENSPANG00000004316) #14 ENSPANG00000041550 ACTR10 (ENSPANG00000013445) #16 ENSPANG00000007163 #17 ARMH4 (ENSPANG00000016609) #15 ARID4A (ENSPANG00000022390) #18 TOMM20L (ENSPANG00000018090) TIMM9 (ENSPANG00000020778) #20 KIAA0586 (ENSPANG00000018663) #21 ENSPANG00000048595 DACT1 (ENSPANG00000004888) #22 ENSPANG00000046553 DAAM1 (ENSPANG00000009285) #24 L3HYPDH (ENSPANG00000018436) JKAMP (ENSPANG00000035482) CCDC175 (ENSPANG00000018662) ENSPANG00000038782 RTN1 (ENSPANG00000015147) #27 LRRC9 (ENSPANG00000020908) #28 DHRS7 (ENSPANG00000021242) #30 PCNX4 (ENSPANG00000007523) #29 PPM1A (ENSPANG00000007522) #32 C14orf39 (ENSPANG00000016606) #34 SIX6 (ENSPANG00000041831) #35 SIX1 (ENSPANG00000049749) #36 SIX4 (ENSPANG00000020970) #37 Vervet Monkey MODERN SPECIES 16 OTX2 (ENSCSAG00000014537) #9 EXOC5 (ENSCSAG00000014529) #10 AP5M1 (ENSCSAG00000014515) #11 NAA30 (ENSCSAG00000014509) #12 CCDC198 (ENSCSAG00000014503) #13 SLC35F4 (ENSCSAG00000014489) #14 ARMH4 (ENSCSAG00000014459) #15 ACTR10 (ENSCSAG00000014447) #16 PSMA3 (ENSCSAG00000014435) #17 ENSCSAG00000019412 ARID4A (ENSCSAG00000014425) #18 ENSCSAG00000014416 TOMM20L (ENSCSAG00000014402) ENSCSAG00000014391 KIAA0586 (ENSCSAG00000014385) #21 DACT1 (ENSCSAG00000014335) #22 DAAM1 (ENSCSAG00000014331) #24 GPR135 (ENSCSAG00000019413) #25 L3HYPDH (ENSCSAG00000014314) JKAMP (ENSCSAG00000014311) CCDC175 (ENSCSAG00000014299) ENSCSAG00000014263 ##27 ENSCSAG00000014252 ##27 LRRC9 (ENSCSAG00000014241) #28 PCNX4 (ENSCSAG00000014213) #29 DHRS7 (ENSCSAG00000014204) #30 PPM1A (ENSCSAG00000014198) #32 C14orf39 (ENSCSAG00000014189) #34 SIX6 (ENSCSAG00000014178) #35 SIX1 (ENSCSAG00000014174) #36 SIX4 (ENSCSAG00000014171) #37 Rhinopithecus ANCESTRAL SPECIES 105 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912.j #17 ENSGT00550000074912.i.a #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000006293.ed.b ENSGT00390000012397 #21 ENSGT00940000163252.d ENSGT00950000183181.B.a #22 ENSGT00390000012062.n ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Black snub-nosed monkey MODERN SPECIES 2811 NUP210 (ENSRBIG00000025156) IQSEC1 (ENSRBIG00000031968) DACT1 (ENSRBIG00000029351) #22 ENSRBIG00000033469 DAAM1 (ENSRBIG00000031059) #24 GPR135 (ENSRBIG00000037764) #25 L3HYPDH (ENSRBIG00000032537) JKAMP (ENSRBIG00000025261) CCDC175 (ENSRBIG00000034655) ENSRBIG00000037415 ##27 Golden snub-nosed monkey MODERN SPECIES 3204 ARMH4 (ENSRROG00000039537) #15 ACTR10 (ENSRROG00000028840) #16 PSMA3 (ENSRROG00000040700) #17 ENSRROG00000039371 ARID4A (ENSRROG00000034002) #18 TOMM20L (ENSRROG00000040064) TIMM9 (ENSRROG00000045045) #20 KIAA0586 (ENSRROG00000040682) #21 ENSRROG00000036824 DACT1 (ENSRROG00000018434) #22 ENSRROG00000040139 Platyrrhini ANCESTRAL SPECIES 4 ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.m #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Cebidae ANCESTRAL SPECIES 3 ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226.m #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Marmoset MODERN SPECIES 1 ENSCJAG00000047452 EXOC5 (ENSCJAG00000018592) #10 AP5M1 (ENSCJAG00000018620) #11 ENSCJAG00000085327 NAA30 (ENSCJAG00000018629) #12 CCDC198 (ENSCJAG00000018651) #13 SLC35F4 (ENSCJAG00000018660) #14 ENSCJAG00000042369 ARMH4 (ENSCJAG00000018672) #15 ENSCJAG00000079360 ACTR10 (ENSCJAG00000018680) #16 ENSCJAG00000018732 #17 ARID4A (ENSCJAG00000018764) #18 TIMM9 (ENSCJAG00000041647) #20 KIAA0586 (ENSCJAG00000018807) #21 DACT1 (ENSCJAG00000018902) #22 ENSCJAG00000074876 ENSCJAG00000079077 DAAM1 (ENSCJAG00000018906) #24 GPR135 (ENSCJAG00000018962) #25 L3HYPDH (ENSCJAG00000018964) JKAMP (ENSCJAG00000018970) CCDC175 (ENSCJAG00000018979) RTN1 (ENSCJAG00000018989) #27 LRRC9 (ENSCJAG00000019037) #28 PCNX4 (ENSCJAG00000019055) #29 DHRS7 (ENSCJAG00000019070) #30 PPM1A (ENSCJAG00000019087) #32 C14orf39 (ENSCJAG00000019107) #34 SIX6 (ENSCJAG00000019120) #35 ENSCJAG00000084039 Cebidae_a ANCESTRAL SPECIES 31 ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT01030000234606.a.a.a.b.a.a ENSGT01030000234606.a.a.a.b.b ENSGT00940000158601 ENSGT00940000161549.a.a ENSGT01030000234606.a.a.a.b.a.b ENSGT00900000141196 ENSGT00940000160664 ENSGT00940000156269 ENSGT00940000155879 ENSGT00390000007594 ENSGT00940000162680 ENSGT00940000161350 ENSGT00390000012493 ENSGT00390000007200 ENSGT00390000006370.k Capuchin MODERN SPECIES 70 TMEM260 (ENSCCAG00000034475) #8 OTX2 (ENSCCAG00000031967) #9 EXOC5 (ENSCCAG00000033316) #10 AP5M1 (ENSCCAG00000035760) #11 ENSCCAG00000021935 NAA30 (ENSCCAG00000036717) #12 CCDC198 (ENSCCAG00000026343) #13 SLC35F4 (ENSCCAG00000028519) #14 ARMH4 (ENSCCAG00000021161) #15 ACTR10 (ENSCCAG00000030875) #16 PSMA3 (ENSCCAG00000025863) #17 ARID4A (ENSCCAG00000019639) #18 TOMM20L (ENSCCAG00000004185) TIMM9 (ENSCCAG00000028794) #20 KIAA0586 (ENSCCAG00000037329) #21 DACT1 (ENSCCAG00000025892) #22 PLA2G4D (ENSCCAG00000007149) PLA2G4E (ENSCCAG00000017280) EHD4 (ENSCCAG00000030886) SPTBN5 (ENSCCAG00000038115) PLA2G4B (ENSCCAG00000022098) JMJD7 (ENSCCAG00000034712) MAPKBP1 (ENSCCAG00000033660) MGA (ENSCCAG00000033684) TYRO3 (ENSCCAG00000033613) RPAP1 (ENSCCAG00000022515) LTK (ENSCCAG00000029407) ITPKA (ENSCCAG00000032789) RTF1 (ENSCCAG00000027427) NDUFAF1 (ENSCCAG00000029317) ENSCCAG00000015254 Bolivian squirrel monkey MODERN SPECIES 80 ENSSBOG00000020321 ENSSBOG00000035034 EXOC5 (ENSSBOG00000025796) #10 AP5M1 (ENSSBOG00000012256) #11 ENSSBOG00000031572 #12 CCDC198 (ENSSBOG00000024566) #13 ENSSBOG00000018348 SLC35F4 (ENSSBOG00000030364) #14 ARMH4 (ENSSBOG00000023459) #15 ACTR10 (ENSSBOG00000021174) #16 PSMA3 (ENSSBOG00000021565) #17 ARID4A (ENSSBOG00000027453) #18 TOMM20L (ENSSBOG00000025561) TIMM9 (ENSSBOG00000025188) #20 KIAA0586 (ENSSBOG00000032138) #21 DACT1 (ENSSBOG00000005081) #22 ENSSBOG00000036126 Mas night monkey MODERN SPECIES 273 EXOC5 (ENSANAG00000038073) #10 AP5M1 (ENSANAG00000027663) #11 ENSANAG00000019497 NAA30 (ENSANAG00000025690) #12 ENSANAG00000011004 CCDC198 (ENSANAG00000022556) #13 ENSANAG00000036820 SLC35F4 (ENSANAG00000023234) #14 ARMH4 (ENSANAG00000028979) #15 ACTR10 (ENSANAG00000036574) #16 PSMA3 (ENSANAG00000034210) #17 ARID4A (ENSANAG00000037559) #18 TOMM20L (ENSANAG00000022063) TIMM9 (ENSANAG00000024267) #20 KIAA0586 (ENSANAG00000025989) #21 DACT1 (ENSANAG00000035326) #22 Laurasiatheria ANCESTRAL SPECIES 3 ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183181.B.a #22 Hedgehog MODERN SPECIES 16307 DACT1 (ENSEEUG00000009193) #22 Common shrew MODERN SPECIES 12188 ENSSARG00000005358 #22 Laurasiatheria_a ANCESTRAL SPECIES 2 ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.b ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Artiodactyla ANCESTRAL SPECIES 3 ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.b ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Suina ANCESTRAL SPECIES 30 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000165313 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.b ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Pig MODERN SPECIES ENSSSCG00000057475 NAA30 (ENSSSCG00000031332) #12 CCDC198 (ENSSSCG00000005067) #13 ENSSSCG00000052032 SLC35F4 (ENSSSCG00000005068) #14 ENSSSCG00000054505 ARMH4 (ENSSSCG00000005071) #15 ENSSSCG00000049460 ACTR10 (ENSSSCG00000022299) #16 PSMA3 (ENSSSCG00000005072) #17 ARID4A (ENSSSCG00000005073) #18 TOMM20L (ENSSSCG00000005075) ENSSSCG00000027270 KIAA0586 (ENSSSCG00000005076) #21 ENSSSCG00000060230 DACT1 (ENSSSCG00000031856) #22 ENSSSCG00000005077 ENSSSCG00000050857 DAAM1 (ENSSSCG00000005078) #24 ENSSSCG00000044767 GPR135 (ENSSSCG00000032928) #25 L3HYPDH (ENSSSCG00000037854) JKAMP (ENSSSCG00000034798) CCDC175 (ENSSSCG00000027678) RTN1 (ENSSSCG00000025013) #27 ENSSSCG00000039172 LRRC9 (ENSSSCG00000005081) #28 PCNX4 (ENSSSCG00000005082) #29 DHRS7 (ENSSSCG00000005083) #30 PPM1A (ENSSSCG00000005084) #32 C14orf39 (ENSSSCG00000005085) #34 Chacoan peccary MODERN SPECIES 785 PELI2 (ENSCWAG00000008094) #7 TMEM260 (ENSCWAG00000007995) #8 ENSCWAG00000007953 EXOC5 (ENSCWAG00000007866) #10 AP5M1 (ENSCWAG00000007815) #11 NAA30 (ENSCWAG00000007778) #12 CCDC198 (ENSCWAG00000007702) #13 SLC35F4 (ENSCWAG00000007638) #14 ARMH4 (ENSCWAG00000007602) #15 ACTR10 (ENSCWAG00000007576) #16 PSMA3 (ENSCWAG00000007528) #17 ARID4A (ENSCWAG00000007451) #18 TOMM20L (ENSCWAG00000007414) TIMM9 (ENSCWAG00000007380) #20 KIAA0586 (ENSCWAG00000005797) #21 DACT1 (ENSCWAG00000005675) #22 DAAM1 (ENSCWAG00000005580) #24 GPR135 (ENSCWAG00000005506) #25 L3HYPDH (ENSCWAG00000005482) JKAMP (ENSCWAG00000005394) CCDC175 (ENSCWAG00000005299) ENSCWAG00000005267 RTN1 (ENSCWAG00000004885) #27 LRRC9 (ENSCWAG00000004604) #28 PCNX4 (ENSCWAG00000004544) #29 DHRS7 (ENSCWAG00000004509) #30 PPM1A (ENSCWAG00000004445) #32 ENSCWAG00000004419 C14orf39 (ENSCWAG00000004324) #34 SIX6 (ENSCWAG00000004290) #35 SIX1 (ENSCWAG00000004261) #36 Artiodactyla_a ANCESTRAL SPECIES 2 ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Camelidae ANCESTRAL SPECIES 8 ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Arabian camel MODERN SPECIES 32 TMEM260 (ENSCDRG00005003273) #8 ENSCDRG00005003291 OTX2 (ENSCDRG00005003304) #9 EXOC5 (ENSCDRG00005003347) #10 AP5M1 (ENSCDRG00005003511) #11 NAA30 (ENSCDRG00005003560) #12 CCDC198 (ENSCDRG00005003594) #13 SLC35F4 (ENSCDRG00005003636) #14 ARMH4 (ENSCDRG00005003753) #15 ACTR10 (ENSCDRG00005003798) #16 PSMA3 (ENSCDRG00005003904) #17 ARID4A (ENSCDRG00005003998) #18 TOMM20L (ENSCDRG00005004114) TIMM9 (ENSCDRG00005004157) #20 KIAA0586 (ENSCDRG00005004214) #21 DACT1 (ENSCDRG00005004462) #22 ENSCDRG00005004515 #24 ENSCDRG00005004523 #24 GPR135 (ENSCDRG00005004537) #25 L3HYPDH (ENSCDRG00005004550) JKAMP (ENSCDRG00005004587) CCDC175 (ENSCDRG00005004700) RTN1 (ENSCDRG00005004799) #27 LRRC9 (ENSCDRG00005005041) #28 PCNX4 (ENSCDRG00005005066) #29 DHRS7 (ENSCDRG00005005123) #30 PPM1A (ENSCDRG00005005182) #32 ENSCDRG00005005223 C14orf39 (ENSCDRG00005005239) #34 SIX6 (ENSCDRG00005005287) #35 SIX1 (ENSCDRG00005005305) #36 Artiodactyla_b ANCESTRAL SPECIES 2 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Pecora ANCESTRAL SPECIES 6 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Percora_a ANCESTRAL SPECIES 8 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Bovidae ANCESTRAL SPECIES 7 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Caprinae ANCESTRAL SPECIES 11 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014.rb.a #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832.c #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Goat MODERN SPECIES 1 ENSCHIG00000021274 TMEM260 (ENSCHIG00000018277) #8 OTX2 (ENSCHIG00000011465) #9 EXOC5 (ENSCHIG00000021413) #10 AP5M1 (ENSCHIG00000017238) #11 NAA30 (ENSCHIG00000014880) #12 CCDC198 (ENSCHIG00000027108) #13 SLC35F4 (ENSCHIG00000023214) #14 ARMH4 (ENSCHIG00000011182) #15 ACTR10 (ENSCHIG00000025582) #16 PSMA3 (ENSCHIG00000016692) #17 ARID4A (ENSCHIG00000021589) #18 TOMM20L (ENSCHIG00000023817) TIMM9 (ENSCHIG00000020353) #20 KIAA0586 (ENSCHIG00000022943) #21 DACT1 (ENSCHIG00000020832) #22 ENSCHIG00000003466 DAAM1 (ENSCHIG00000000665) #24 GPR135 (ENSCHIG00000014842) #25 L3HYPDH (ENSCHIG00000019611) JKAMP (ENSCHIG00000021867) CCDC175 (ENSCHIG00000022114) ENSCHIG00000016341 ##27 ENSCHIG00000000816 ENSCHIG00000003392 ##27 LRRC9 (ENSCHIG00000025206) #28 PCNX4 (ENSCHIG00000027192) #29 DHRS7 (ENSCHIG00000026336) #30 ENSCHIG00000006564 ENSCHIG00000022625 #32 SIX6 (ENSCHIG00000017541) #35 Rambouillet Sheep MODERN SPECIES 23 ENSOARG00020019111 #8 OTX2 (ENSOARG00020019426) #9 EXOC5 (ENSOARG00020019509) #10 AP5M1 (ENSOARG00020020008) #11 NAA30 (ENSOARG00020020150) #12 CCDC198 (ENSOARG00020020200) #13 ENSOARG00020020321 SLC35F4 (ENSOARG00020020338) #14 ARMH4 (ENSOARG00020020459) #15 ENSOARG00020020575 ACTR10 (ENSOARG00020020638) #16 PSMA3 (ENSOARG00020020746) #17 ARID4A (ENSOARG00020020842) #18 TOMM20L (ENSOARG00020021304) TIMM9 (ENSOARG00020007740) #20 DACT1 (ENSOARG00020008146) #22 ENSOARG00020008208 ENSOARG00020008239 ENSOARG00020008270 ENSOARG00020008316 ENSOARG00020008342 DAAM1 (ENSOARG00020008441) #24 L3HYPDH (ENSOARG00020008883) JKAMP (ENSOARG00020008977) CCDC175 (ENSOARG00020009081) RTN1 (ENSOARG00020009209) #27 ENSOARG00020009459 LRRC9 (ENSOARG00020009484) #28 PCNX4 (ENSOARG00020009627) #29 DHRS7 (ENSOARG00020009716) #30 ENSOARG00020009767 Bovinae ANCESTRAL SPECIES 11 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Bos ANCESTRAL SPECIES 13 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Bos_b ANCESTRAL SPECIES 11 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Hybrid Bos Indicus MODERN SPECIES 1 TMEM260 (ENSBIXG00005006780) #8 OTX2 (ENSBIXG00005010652) #9 EXOC5 (ENSBIXG00005010619) #10 AP5M1 (ENSBIXG00005000698) #11 NAA30 (ENSBIXG00005010568) #12 CCDC198 (ENSBIXG00005010538) #13 SLC35F4 (ENSBIXG00005010483) #14 ARMH4 (ENSBIXG00005010427) #15 ENSBIXG00005010405 ACTR10 (ENSBIXG00005000870) #16 PSMA3 (ENSBIXG00005010386) #17 ARID4A (ENSBIXG00005010327) #18 TOMM20L (ENSBIXG00005010278) TIMM9 (ENSBIXG00005010269) #20 KIAA0586 (ENSBIXG00005010220) #21 DACT1 (ENSBIXG00005010128) #22 DAAM1 (ENSBIXG00005010058) #24 ENSBIXG00005010009 GPR135 (ENSBIXG00005009994) #25 L3HYPDH (ENSBIXG00005009991) JKAMP (ENSBIXG00005000723) CCDC175 (ENSBIXG00005009913) RTN1 (ENSBIXG00005006100) #27 LRRC9 (ENSBIXG00005000617) #28 PCNX4 (ENSBIXG00005009798) #29 DHRS7 (ENSBIXG00005009756) #30 ENSBIXG00005009707 ENSBIXG00005009696 #32 C14orf39 (ENSBIXG00005009629) #34 SIX6 (ENSBIXG00005009549) #35 SIX1 (ENSBIXG00005009529) #36 Cow MODERN SPECIES 1 TMEM260 (ENSBTAG00000030881) #8 OTX2 (ENSBTAG00000014741) #9 ENSBTAG00000051793 EXOC5 (ENSBTAG00000013042) #10 AP5M1 (ENSBTAG00000013043) #11 NAA30 (ENSBTAG00000012998) #12 CCDC198 (ENSBTAG00000009862) #13 SLC35F4 (ENSBTAG00000006341) #14 ARMH4 (ENSBTAG00000020880) #15 ACTR10 (ENSBTAG00000014392) #16 PSMA3 (ENSBTAG00000002808) #17 ARID4A (ENSBTAG00000018898) #18 TOMM20L (ENSBTAG00000052431) TIMM9 (ENSBTAG00000010503) KIAA0586 (ENSBTAG00000004631) #21 DACT1 (ENSBTAG00000019421) #22 ENSBTAG00000045799 DAAM1 (ENSBTAG00000005984) #24 GPR135 (ENSBTAG00000003370) #25 L3HYPDH (ENSBTAG00000030824) JKAMP (ENSBTAG00000003371) ENSBTAG00000051848 RTN1 (ENSBTAG00000011451) #27 LRRC9 (ENSBTAG00000003090) #28 PCNX4 (ENSBTAG00000014096) #29 DHRS7 (ENSBTAG00000020729) #30 PPM1A (ENSBTAG00000018127) #32 SIX6 (ENSBTAG00000013035) #35 SIX1 (ENSBTAG00000012139) #36 SIX4 (ENSBTAG00000049091) #37 MNAT1 (ENSBTAG00000030801) Bos_a ANCESTRAL SPECIES 1 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.b ENSGT00940000156452 #24 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Domestic yak MODERN SPECIES 2 OTX2 (ENSBGRG00000005329) #9 EXOC5 (ENSBGRG00000005408) #10 AP5M1 (ENSBGRG00000005692) #11 NAA30 (ENSBGRG00000005732) #12 CCDC198 (ENSBGRG00000005763) #13 SLC35F4 (ENSBGRG00000005871) #14 ARMH4 (ENSBGRG00000005926) #15 ACTR10 (ENSBGRG00000006018) #16 PSMA3 (ENSBGRG00000006071) #17 ARID4A (ENSBGRG00000006268) #18 TOMM20L (ENSBGRG00000006358) TIMM9 (ENSBGRG00000006403) #20 KIAA0586 (ENSBGRG00000006467) #21 ENSBGRG00000006612 ENSBGRG00000006621 DACT1 (ENSBGRG00000006643) #22 ENSBGRG00000006708 DAAM1 (ENSBGRG00000006735) #24 L3HYPDH (ENSBGRG00000006914) JKAMP (ENSBGRG00000006967) CCDC175 (ENSBGRG00000007149) RTN1 (ENSBGRG00000007425) #27 LRRC9 (ENSBGRG00000007630) #28 ENSBGRG00000007786 PCNX4 (ENSBGRG00000007801) #29 DHRS7 (ENSBGRG00000007903) #30 PPM1A (ENSBGRG00000008044) #32 C14orf39 (ENSBGRG00000008306) #34 SIX6 (ENSBGRG00000008595) #35 SIX1 (ENSBGRG00000008619) #36 SIX4 (ENSBGRG00000008677) #37 Wild yak MODERN SPECIES 1217 ENSBMUG00000001752 ARMH4 (ENSBMUG00000001687) #15 ACTR10 (ENSBMUG00000001660) #16 PSMA3 (ENSBMUG00000001636) #17 ARID4A (ENSBMUG00000001579) #18 TOMM20L (ENSBMUG00000001504) TIMM9 (ENSBMUG00000001484) #20 KIAA0586 (ENSBMUG00000001435) #21 DACT1 (ENSBMUG00000000916) #22 DAAM1 (ENSBMUG00000000880) #24 Siberian musk deer MODERN SPECIES 258 ENSMMSG00000006587 #10 ENSMMSG00000006789 AP5M1 (ENSMMSG00000006814) #11 NAA30 (ENSMMSG00000006855) #12 ENSMMSG00000006892 #13 SLC35F4 (ENSMMSG00000006922) #14 ENSMMSG00000006982 ENSMMSG00000007001 ARMH4 (ENSMMSG00000007016) #15 ACTR10 (ENSMMSG00000007044) #16 PSMA3 (ENSMMSG00000007088) #17 ARID4A (ENSMMSG00000007258) #18 TOMM20L (ENSMMSG00000007451) TIMM9 (ENSMMSG00000007476) #20 KIAA0586 (ENSMMSG00000007552) #21 DACT1 (ENSMMSG00000008105) #22 Yarkand deer MODERN SPECIES 3 EXOC5 (ENSCHYG00000006373) #10 AP5M1 (ENSCHYG00000006463) #11 NAA30 (ENSCHYG00000006525) #12 CCDC198 (ENSCHYG00000006562) #13 SLC35F4 (ENSCHYG00000006593) #14 ENSCHYG00000006672 ARMH4 (ENSCHYG00000006690) #15 ENSCHYG00000006747 ENSCHYG00000006780 ACTR10 (ENSCHYG00000006808) #16 PSMA3 (ENSCHYG00000006862) #17 ARID4A (ENSCHYG00000006944) #18 TOMM20L (ENSCHYG00000007060) TIMM9 (ENSCHYG00000007088) #20 KIAA0586 (ENSCHYG00000007211) #21 DACT1 (ENSCHYG00000007708) #22 ENSCHYG00000007730 DAAM1 (ENSCHYG00000007778) #24 ENSCHYG00000008040 L3HYPDH (ENSCHYG00000008071) GPR135 (ENSCHYG00000008152) #25 JKAMP (ENSCHYG00000008180) CCDC175 (ENSCHYG00000008268) RTN1 (ENSCHYG00000008376) #27 LRRC9 (ENSCHYG00000008495) #28 PCNX4 (ENSCHYG00000008766) #29 DHRS7 (ENSCHYG00000008948) #30 PPM1A (ENSCHYG00000009103) #32 SIX6 (ENSCHYG00000009294) #35 SIX1 (ENSCHYG00000009332) #36 SIX4 (ENSCHYG00000009371) #37 Cetacea ANCESTRAL SPECIES 2 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00950000182802.B.a.a.a.b.a.b ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Odontoceti ANCESTRAL SPECIES 2 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00950000182802.B.a.a.a.b.a.b ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Dolphin MODERN SPECIES 2559 TOMM20L (ENSTTRG00000008729) TIMM9 (ENSTTRG00000008743) #20 KIAA0586 (ENSTTRG00000008746) #21 DACT1 (ENSTTRG00000008825) #22 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912.h #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Vaquita MODERN SPECIES 11 KTN1 (ENSPSNG00000007288) PELI2 (ENSPSNG00000007728) #7 TMEM260 (ENSPSNG00000007769) #8 OTX2 (ENSPSNG00000007834) #9 EXOC5 (ENSPSNG00000007938) #10 AP5M1 (ENSPSNG00000008044) #11 NAA30 (ENSPSNG00000008083) #12 CCDC198 (ENSPSNG00000008124) #13 SLC35F4 (ENSPSNG00000008233) #14 ARMH4 (ENSPSNG00000008345) #15 ACTR10 (ENSPSNG00000008378) #16 ENSPSNG00000008426 #17 ARID4A (ENSPSNG00000008518) #18 TIMM9 (ENSPSNG00000008723) #20 KIAA0586 (ENSPSNG00000008812) #21 DACT1 (ENSPSNG00000009078) #22 DAAM1 (ENSPSNG00000009202) #24 ENSPSNG00000009236 #25 L3HYPDH (ENSPSNG00000009297) JKAMP (ENSPSNG00000009382) CCDC175 (ENSPSNG00000009510) RTN1 (ENSPSNG00000009742) #27 LRRC9 (ENSPSNG00000010083) #28 PCNX4 (ENSPSNG00000010774) #29 DHRS7 (ENSPSNG00000010883) #30 PPM1A (ENSPSNG00000010968) #32 C14orf39 (ENSPSNG00000011133) #34 SIX6 (ENSPSNG00000011302) #35 SIX1 (ENSPSNG00000011343) #36 SIX4 (ENSPSNG00000011386) #37 MNAT1 (ENSPSNG00000011449) Monodontidae ANCESTRAL SPECIES 5 ENSGT00550000074912.h #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000155618.fb.b ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Narwhal MODERN SPECIES 308 PELI2 (ENSMMNG00015019176) #7 TMEM260 (ENSMMNG00015019211) #8 OTX2 (ENSMMNG00015019252) #9 ENSMMNG00015019287 EXOC5 (ENSMMNG00015019327) #10 AP5M1 (ENSMMNG00015019394) #11 NAA30 (ENSMMNG00015019499) #12 CCDC198 (ENSMMNG00015009993) #13 SLC35F4 (ENSMMNG00015010003) #14 ARMH4 (ENSMMNG00015010028) #15 ENSMMNG00015010047 #16 PSMA3 (ENSMMNG00015010058) #17 ARID4A (ENSMMNG00015010145) #18 KIAA0586 (ENSMMNG00015010227) #21 TIMM9 (ENSMMNG00015010333) #20 DACT1 (ENSMMNG00015010354) #22 ENSMMNG00015010373 DAAM1 (ENSMMNG00015010402) #24 GPR135 (ENSMMNG00015010436) #25 L3HYPDH (ENSMMNG00015010453) JKAMP (ENSMMNG00015010475) CCDC175 (ENSMMNG00015010518) RTN1 (ENSMMNG00015010576) #27 LRRC9 (ENSMMNG00015010630) #28 PCNX4 (ENSMMNG00015010658) #29 DHRS7 (ENSMMNG00015010681) #30 PPM1A (ENSMMNG00015010711) #32 C14orf39 (ENSMMNG00015010738) #34 SIX6 (ENSMMNG00015010771) #35 SIX1 (ENSMMNG00015010788) #36 SIX4 (ENSMMNG00015010804) #37 Beluga whale MODERN SPECIES 44 TMEM260 (ENSDLEG00000006827) #8 OTX2 (ENSDLEG00000006819) #9 ENSDLEG00000006814 EXOC5 (ENSDLEG00000006751) #10 AP5M1 (ENSDLEG00000006746) #11 NAA30 (ENSDLEG00000006734) #12 CCDC198 (ENSDLEG00000006725) #13 SLC35F4 (ENSDLEG00000006679) #14 CUNH14orf37 (ENSDLEG00000006671) #15 ACTR10 (ENSDLEG00000006658) #16 PSMA3 (ENSDLEG00000006602) #17 ARID4A (ENSDLEG00000006563) #18 TOMM20L (ENSDLEG00000006554) TIMM9 (ENSDLEG00000006549) #20 KIAA0586 (ENSDLEG00000006402) #21 DACT1 (ENSDLEG00000006372) #22 ENSDLEG00000006368 DAAM1 (ENSDLEG00000006328) #24 L3HYPDH (ENSDLEG00000006321) JKAMP (ENSDLEG00000006315) CCDC175 (ENSDLEG00000006277) RTN1 (ENSDLEG00000006256) #27 LRRC9 (ENSDLEG00000006242) #28 PCNX4 (ENSDLEG00000006209) #29 DHRS7 (ENSDLEG00000006194) #30 PPM1A (ENSDLEG00000006180) #32 SIX6 (ENSDLEG00000006168) #35 SIX1 (ENSDLEG00000006164) #36 SIX4 (ENSDLEG00000006160) #37 TRMT5 (ENSDLEG00000006154) MNAT1 (ENSDLEG00000006132) Sperm whale MODERN SPECIES 2 KTN1 (ENSPCTG00005022715) PELI2 (ENSPCTG00005022734) #7 TMEM260 (ENSPCTG00005022736) #8 OTX2 (ENSPCTG00005022740) #9 EXOC5 (ENSPCTG00005022744) #10 AP5M1 (ENSPCTG00005022748) #11 NAA30 (ENSPCTG00005022750) #12 CCDC198 (ENSPCTG00005022752) #13 SLC35F4 (ENSPCTG00005022755) #14 ARMH4 (ENSPCTG00005022756) #15 ACTR10 (ENSPCTG00005022758) #16 ENSPCTG00005005585 #17 ARID4A (ENSPCTG00005005643) #18 TIMM9 (ENSPCTG00005005709) #20 KIAA0586 (ENSPCTG00005005784) #21 DACT1 (ENSPCTG00005005972) #22 DAAM1 (ENSPCTG00005006033) #24 L3HYPDH (ENSPCTG00005006127) JKAMP (ENSPCTG00005006188) CCDC175 (ENSPCTG00005006268) RTN1 (ENSPCTG00005006386) #27 ENSPCTG00005006692 LRRC9 (ENSPCTG00005006731) #28 PCNX4 (ENSPCTG00005006953) #29 DHRS7 (ENSPCTG00005007007) #30 PPM1A (ENSPCTG00005007048) #32 C14orf39 (ENSPCTG00005007109) #34 SIX6 (ENSPCTG00005007177) #35 SIX1 (ENSPCTG00005007198) #36 MNAT1 (ENSPCTG00005007267) TRMT5 (ENSPCTG00005007560) Blue whale MODERN SPECIES 11 ENSBMSG00010006103 PELI2 (ENSBMSG00010006118) #7 TMEM260 (ENSBMSG00010006197) #8 ENSBMSG00010006244 #9 EXOC5 (ENSBMSG00010006288) #10 NAA30 (ENSBMSG00010006423) #12 CCDC198 (ENSBMSG00010006460) #13 SLC35F4 (ENSBMSG00010006486) #14 ARMH4 (ENSBMSG00010006512) #15 ACTR10 (ENSBMSG00010006532) #16 PSMA3 (ENSBMSG00010006547) #17 ARID4A (ENSBMSG00010006597) #18 TOMM20L (ENSBMSG00010006639) TIMM9 (ENSBMSG00010006673) #20 KIAA0586 (ENSBMSG00010006894) #21 DACT1 (ENSBMSG00010007147) #22 DAAM1 (ENSBMSG00010007204) #24 GPR135 (ENSBMSG00010007228) #25 L3HYPDH (ENSBMSG00010007243) JKAMP (ENSBMSG00010007274) CCDC175 (ENSBMSG00010007322) RTN1 (ENSBMSG00010007376) #27 ENSBMSG00010007407 LRRC9 (ENSBMSG00010007533) #28 PCNX4 (ENSBMSG00010007679) #29 DHRS7 (ENSBMSG00010007688) #30 PPM1A (ENSBMSG00010007693) #32 C14orf39 (ENSBMSG00010007715) #34 SIX6 (ENSBMSG00010007733) #35 SIX1 (ENSBMSG00010007741) #36 SIX4 (ENSBMSG00010007749) #37 Laurasiatheria_b ANCESTRAL SPECIES 3 ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.b ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Carnivora ANCESTRAL SPECIES ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Caniformia ANCESTRAL SPECIES 15 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Caniformia_b ANCESTRAL SPECIES 14 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Ursidae ANCESTRAL SPECIES 10 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912.d #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Ursus ANCESTRAL SPECIES 11 ENSGT00390000013544.m #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00950000185672 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912.d #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 American black bear MODERN SPECIES 1840 DACT1 (ENSUAMG00000022833) #22 Polar bear MODERN SPECIES 100 KTN1 (ENSUMAG00000016377) PELI2 (ENSUMAG00000016490) #7 TMEM260 (ENSUMAG00000016516) #8 OTX2 (ENSUMAG00000016526) #9 EXOC5 (ENSUMAG00000016546) #10 AP5M1 (ENSUMAG00000016550) #11 ENSUMAG00000016554 ENSUMAG00000016559 #13 SLC35F4 (ENSUMAG00000016584) #14 ARMH4 (ENSUMAG00000016621) #15 ACTR10 (ENSUMAG00000016666) #16 PSMA3 (ENSUMAG00000016786) #17 ARID4A (ENSUMAG00000016791) #18 TIMM9 (ENSUMAG00000016801) #20 KIAA0586 (ENSUMAG00000016828) #21 DACT1 (ENSUMAG00000000074) #22 Giant Panda MODERN SPECIES 5 ENSAMEG00000002332 #9 EXOC5 (ENSAMEG00000002337) #10 AP5M1 (ENSAMEG00000002388) #11 ENSAMEG00000002401 NAA30 (ENSAMEG00000030653) #12 CCDC198 (ENSAMEG00000002423) #13 SLC35F4 (ENSAMEG00000002428) #14 ARMH4 (ENSAMEG00000002447) #15 ACTR10 (ENSAMEG00000002459) #16 PSMA3 (ENSAMEG00000002498) #17 ARID4A (ENSAMEG00000002532) #18 TOMM20L (ENSAMEG00000002588) TIMM9 (ENSAMEG00000029236) #20 KIAA0586 (ENSAMEG00000002590) #21 DACT1 (ENSAMEG00000031376) #22 DAAM1 (ENSAMEG00000002672) #24 GPR135 (ENSAMEG00000028602) #25 L3HYPDH (ENSAMEG00000002811) JKAMP (ENSAMEG00000002820) CCDC175 (ENSAMEG00000002824) RTN1 (ENSAMEG00000002842) #27 LRRC9 (ENSAMEG00000002875) #28 PCNX4 (ENSAMEG00000002894) #29 DHRS7 (ENSAMEG00000002913) #30 PPM1A (ENSAMEG00000002928) #32 C14orf39 (ENSAMEG00000002940) #34 SIX6 (ENSAMEG00000002957) #35 SIX1 (ENSAMEG00000002965) #36 SIX4 (ENSAMEG00000030367) #37 MNAT1 (ENSAMEG00000002974) Mustelinae ANCESTRAL SPECIES 14 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Ferret MODERN SPECIES 164 TMEM260 (ENSMPUG00000005908) #8 OTX2 (ENSMPUG00000005923) #9 EXOC5 (ENSMPUG00000005928) #10 AP5M1 (ENSMPUG00000005943) #11 NAA30 (ENSMPUG00000005958) #12 ENSMPUG00000005967 CCDC198 (ENSMPUG00000005974) #13 ENSMPUG00000019637 SLC35F4 (ENSMPUG00000005988) #14 ARMH4 (ENSMPUG00000006024) #15 ACTR10 (ENSMPUG00000006030) #16 PSMA3 (ENSMPUG00000006126) #17 ENSMPUG00000019638 ARID4A (ENSMPUG00000006137) #18 KIAA0586 (ENSMPUG00000006154) #21 DACT1 (ENSMPUG00000006171) #22 DAAM1 (ENSMPUG00000006204) #24 L3HYPDH (ENSMPUG00000006223) JKAMP (ENSMPUG00000006232) CCDC175 (ENSMPUG00000006239) RTN1 (ENSMPUG00000006252) #27 LRRC9 (ENSMPUG00000006265) #28 PCNX4 (ENSMPUG00000006290) #29 DHRS7 (ENSMPUG00000006299) #30 PPM1A (ENSMPUG00000006311) #32 ENSMPUG00000006319 C14orf39 (ENSMPUG00000006328) #34 SIX6 (ENSMPUG00000006406) #35 SIX1 (ENSMPUG00000006412) #36 ENSMPUG00000006420 SIX4 (ENSMPUG00000006423) #37 American mink MODERN SPECIES TMEM260 (ENSNVIG00000005061) #8 OTX2 (ENSNVIG00000005090) #9 EXOC5 (ENSNVIG00000005107) #10 AP5M1 (ENSNVIG00000005136) #11 NAA30 (ENSNVIG00000005154) #12 ENSNVIG00000005174 CCDC198 (ENSNVIG00000005185) #13 SLC35F4 (ENSNVIG00000005200) #14 ARMH4 (ENSNVIG00000005230) #15 ACTR10 (ENSNVIG00000005257) #16 PSMA3 (ENSNVIG00000005285) #17 ARID4A (ENSNVIG00000005417) #18 TOMM20L (ENSNVIG00000005638) TIMM9 (ENSNVIG00000005646) #20 KIAA0586 (ENSNVIG00000005684) #21 DACT1 (ENSNVIG00000005916) #22 ENSNVIG00000005940 DAAM1 (ENSNVIG00000005958) #24 GPR135 (ENSNVIG00000006000) #25 L3HYPDH (ENSNVIG00000006003) JKAMP (ENSNVIG00000006023) CCDC175 (ENSNVIG00000006070) RTN1 (ENSNVIG00000006123) #27 LRRC9 (ENSNVIG00000006214) #28 PCNX4 (ENSNVIG00000006277) #29 ENSNVIG00000006318 DHRS7 (ENSNVIG00000006325) #30 PPM1A (ENSNVIG00000006366) #32 C14orf39 (ENSNVIG00000006397) #34 SIX6 (ENSNVIG00000006422) #35 SIX1 (ENSNVIG00000006437) #36 Canidae ANCESTRAL SPECIES 4 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912.a #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00950000183027.a.b.a ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Canis_lupus ANCESTRAL SPECIES 8 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00510000047486.f.a ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912.a #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00950000183027.a.b.a ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Dog MODERN SPECIES 36 ENSCAFG00845017176 EXOC5 (ENSCAFG00845017251) #10 AP5M1 (ENSCAFG00845017449) #11 NAA30 (ENSCAFG00845017715) #12 CCDC198 (ENSCAFG00845017758) #13 SLC35F4 (ENSCAFG00845017859) #14 ENSCAFG00845018031 ARMH4 (ENSCAFG00845018091) #15 ENSCAFG00845018183 ACTR10 (ENSCAFG00845018264) #16 PSMA3 (ENSCAFG00845018487) #17 ARID4A (ENSCAFG00845018674) #18 TOMM20L (ENSCAFG00845018941) TIMM9 (ENSCAFG00845019018) #20 KIAA0586 (ENSCAFG00845019145) #21 DACT1 (ENSCAFG00845019686) #22 DAAM1 (ENSCAFG00845019817) #24 GPR135 (ENSCAFG00845020090) #25 JKAMP (ENSCAFG00845020160) L3HYPDH (ENSCAFG00845020358) CCDC175 (ENSCAFG00845020417) RTN1 (ENSCAFG00845020712) #27 LRRC9 (ENSCAFG00845021147) #28 PCNX4 (ENSCAFG00845021996) #29 DHRS7 (ENSCAFG00845022116) #30 PPM1A (ENSCAFG00845022268) #32 C14orf39 (ENSCAFG00845022392) #34 SIX6 (ENSCAFG00845022479) #35 SIX1 (ENSCAFG00845022548) #36 SIX4 (ENSCAFG00845022621) #37 MNAT1 (ENSCAFG00845022729) Dingo MODERN SPECIES 161 EXOC5 (ENSCAFG00020009052) #10 AP5M1 (ENSCAFG00020009041) #11 NAA30 (ENSCAFG00020009034) #12 CCDC198 (ENSCAFG00020009029) #13 SLC35F4 (ENSCAFG00020008987) #14 ENSCAFG00020008949 ENSCAFG00020008947 ENSCAFG00020008939 ARMH4 (ENSCAFG00020008905) #15 ACTR10 (ENSCAFG00020008899) #16 PSMA3 (ENSCAFG00020008843) #17 ARID4A (ENSCAFG00020008690) #18 TOMM20L (ENSCAFG00020008677) TIMM9 (ENSCAFG00020008668) #20 KIAA0586 (ENSCAFG00020008489) #21 DACT1 (ENSCAFG00020008439) #22 DAAM1 (ENSCAFG00020008393) #24 L3HYPDH (ENSCAFG00020008358) JKAMP (ENSCAFG00020008348) CCDC175 (ENSCAFG00020008321) RTN1 (ENSCAFG00020008298) #27 LRRC9 (ENSCAFG00020008180) #28 PCNX4 (ENSCAFG00020008166) #29 DHRS7 (ENSCAFG00020008153) #30 ENSCAFG00020008132 PPM1A (ENSCAFG00020008123) #32 C14orf39 (ENSCAFG00020008114) #34 SIX6 (ENSCAFG00020008085) #35 ENSCAFG00020008082 SIX1 (ENSCAFG00020008070) #36 SIX4 (ENSCAFG00020008062) #37 Red fox MODERN SPECIES 33 OTX2 (ENSVVUG00000029575) #9 EXOC5 (ENSVVUG00000029570) #10 AP5M1 (ENSVVUG00000029565) #11 NAA30 (ENSVVUG00000029563) #12 CCDC198 (ENSVVUG00000029562) #13 SLC35F4 (ENSVVUG00000029560) #14 ENSVVUG00000029558 ENSVVUG00000029555 ENSVVUG00000029554 ARMH4 (ENSVVUG00000029553) #15 ACTR10 (ENSVVUG00000029550) #16 PSMA3 (ENSVVUG00000029547) #17 ARID4A (ENSVVUG00000029542) #18 TIMM9 (ENSVVUG00000029539) #20 KIAA0586 (ENSVVUG00000029533) #21 ENSVVUG00000029527 #22 DAAM1 (ENSVVUG00000029522) #24 GPR135 (ENSVVUG00000029521) #25 L3HYPDH (ENSVVUG00000029520) JKAMP (ENSVVUG00000029519) CCDC175 (ENSVVUG00000029518) RTN1 (ENSVVUG00000029515) #27 LRRC9 (ENSVVUG00000029507) #28 PCNX4 (ENSVVUG00000029499) #29 DHRS7 (ENSVVUG00000029494) #30 ENSVVUG00000029492 PPM1A (ENSVVUG00000029490) #32 CUNH14orf39 (ENSVVUG00000029483) #34 ENSVVUG00000029482 SIX6 (ENSVVUG00000029480) #35 SIX1 (ENSVVUG00000029476) #36 Felidae ANCESTRAL SPECIES 1 ENSGT00390000013544 #8 ENSGT00550000074828.a.g.a.i ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665.t #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00390000008820.e.b ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000153096.b.c.b.b.f Panthera ANCESTRAL SPECIES 3 ENSGT00550000074828.a.g.a.i ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665.s #12 ENSGT00390000005665.t #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00390000008820.e.b ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000153096.b.c.b.b.f Panthera_a ANCESTRAL SPECIES 7 ENSGT00550000074828.a.g.a.i ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665.s #12 ENSGT00390000005665.t #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00390000008820.e.b ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000153096.b.c.b.b.f lion MODERN SPECIES 6 ENSPLOG00000004390 OTX2 (ENSPLOG00000004396) #9 EXOC5 (ENSPLOG00000004425) #10 AP5M1 (ENSPLOG00000004456) #11 NAA30 (ENSPLOG00000004476) #12 CCDC198 (ENSPLOG00000004488) #13 ENSPLOG00000004497 SLC35F4 (ENSPLOG00000004506) #14 ARMH4 (ENSPLOG00000004525) #15 ACTR10 (ENSPLOG00000004544) #16 PSMA3 (ENSPLOG00000004568) #17 ARID4A (ENSPLOG00000004625) #18 TOMM20L (ENSPLOG00000004696) TIMM9 (ENSPLOG00000004712) #20 KIAA0586 (ENSPLOG00000004833) #21 DACT1 (ENSPLOG00000004973) #22 DAAM1 (ENSPLOG00000005025) #24 GPR135 (ENSPLOG00000005091) #25 L3HYPDH (ENSPLOG00000005108) JKAMP (ENSPLOG00000005132) CCDC175 (ENSPLOG00000005168) ENSPLOG00000005202 RTN1 (ENSPLOG00000005240) #27 LRRC9 (ENSPLOG00000005342) #28 PCNX4 (ENSPLOG00000005499) #29 DHRS7 (ENSPLOG00000005526) #30 ENSPLOG00000005566 #32 C14orf39 (ENSPLOG00000005611) #34 SIX6 (ENSPLOG00000005656) #35 SIX1 (ENSPLOG00000007543) #36 SIX4 (ENSPLOG00000007573) #37 leopard MODERN SPECIES 21 ENSPPRG00000018058 OTX2 (ENSPPRG00000015487) #9 EXOC5 (ENSPPRG00000023159) #10 AP5M1 (ENSPPRG00000022649) #11 NAA30 (ENSPPRG00000000155) #12 ENSPPRG00000000305 #12 CCDC198 (ENSPPRG00000001064) #13 SLC35F4 (ENSPPRG00000001908) #14 ARMH4 (ENSPPRG00000002270) #15 ACTR10 (ENSPPRG00000002823) #16 PSMA3 (ENSPPRG00000004064) #17 ARID4A (ENSPPRG00000009142) #18 TOMM20L (ENSPPRG00000009498) TIMM9 (ENSPPRG00000010204) #20 KIAA0586 (ENSPPRG00000019869) #21 DACT1 (ENSPPRG00000021095) #22 DAAM1 (ENSPPRG00000000454) #24 L3HYPDH (ENSPPRG00000001455) JKAMP (ENSPPRG00000002938) CCDC175 (ENSPPRG00000003157) ENSPPRG00000003344 RTN1 (ENSPPRG00000004929) #27 LRRC9 (ENSPPRG00000006439) #28 PCNX4 (ENSPPRG00000008286) #29 DHRS7 (ENSPPRG00000009265) #30 PPM1A (ENSPPRG00000009447) #32 C14orf39 (ENSPPRG00000009900) #34 SIX6 (ENSPPRG00000010088) #35 SIX1 (ENSPPRG00000010857) #36 ENSPPRG00000011395 SIX4 (ENSPPRG00000011587) #37 Tiger MODERN SPECIES 490 ARMH4 (ENSPTIG00000007751) #15 ACTR10 (ENSPTIG00000007732) #16 PSMA3 (ENSPTIG00000007709) #17 ARID4A (ENSPTIG00000007597) #18 TOMM20L (ENSPTIG00000007549) TIMM9 (ENSPTIG00000007524) #20 KIAA0586 (ENSPTIG00000007321) #21 ENSPTIG00000007231 #22 DAAM1 (ENSPTIG00000007147) #24 ENSPTIG00000007113 #26 JKAMP (ENSPTIG00000007089) CCDC175 (ENSPTIG00000007051) ENSPTIG00000007034 RTN1 (ENSPTIG00000006987) #27 LRRC9 (ENSPTIG00000006940) #28 PCNX4 (ENSPTIG00000006892) #29 DHRS7 (ENSPTIG00000006869) #30 PPM1A (ENSPTIG00000006846) #32 C14orf39 (ENSPTIG00000006823) #34 SIX6 (ENSPTIG00000006811) #35 ENSPTIG00000006803 #36 SIX4 (ENSPTIG00000006797) #37 MNAT1 (ENSPTIG00000006766) Cat MODERN SPECIES 237 TMEM260 (ENSFCAG00000026610) #8 ENSFCAG00000042008 OTX2 (ENSFCAG00000024521) #9 EXOC5 (ENSFCAG00000002045) #10 AP5M1 (ENSFCAG00000002046) #11 NAA30 (ENSFCAG00000023358) #12 CCDC198 (ENSFCAG00000043889) #13 SLC35F4 (ENSFCAG00000001291) #14 ARMH4 (ENSFCAG00000001858) #15 ACTR10 (ENSFCAG00000045749) #16 PSMA3 (ENSFCAG00000025134) #17 ARID4A (ENSFCAG00000019223) #18 TOMM20L (ENSFCAG00000042004) TIMM9 (ENSFCAG00000034453) #20 KIAA0586 (ENSFCAG00000010821) #21 DACT1 (ENSFCAG00000045905) #22 DAAM1 (ENSFCAG00000015646) #24 GPR135 (ENSFCAG00000052705) #25 L3HYPDH (ENSFCAG00000028924) JKAMP (ENSFCAG00000015647) CCDC175 (ENSFCAG00000008719) ENSFCAG00000035822 RTN1 (ENSFCAG00000008720) #27 LRRC9 (ENSFCAG00000023454) #28 PCNX4 (ENSFCAG00000007893) #29 DHRS7 (ENSFCAG00000010540) #30 PPM1A (ENSFCAG00000026390) #32 CB3H14orf39 (ENSFCAG00000028111) #34 SIX6 (ENSFCAG00000015465) #35 SIX1 (ENSFCAG00000028964) #36 ENSFCAG00000030563 Laurasiatheria_c ANCESTRAL SPECIES 1 ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.b ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Equus ANCESTRAL SPECIES 17 ENSGT00910000147073 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.b ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Horse MODERN SPECIES 16 ENSECAG00000041026 ENSECAG00000053340 OTX2 (ENSECAG00000039904) #9 EXOC5 (ENSECAG00000008168) #10 AP5M1 (ENSECAG00000017818) #11 NAA30 (ENSECAG00000012925) #12 CCDC198 (ENSECAG00000013401) #13 SLC35F4 (ENSECAG00000013530) #14 ARMH4 (ENSECAG00000017456) #15 ACTR10 (ENSECAG00000018903) #16 PSMA3 (ENSECAG00000011509) #17 ARID4A (ENSECAG00000019256) #18 TOMM20L (ENSECAG00000053300) TIMM9 (ENSECAG00000017063) KIAA0586 (ENSECAG00000017695) #21 DACT1 (ENSECAG00000009167) #22 ENSECAG00000038995 ENSECAG00000009184 DAAM1 (ENSECAG00000009258) #24 GPR135 (ENSECAG00000034061) #25 L3HYPDH (ENSECAG00000017914) JKAMP (ENSECAG00000026924) ENSECAG00000050328 CCDC175 (ENSECAG00000018680) RTN1 (ENSECAG00000024305) #27 LRRC9 (ENSECAG00000015680) #28 ENSECAG00000019407 PCNX4 (ENSECAG00000000365) #29 DHRS7 (ENSECAG00000011422) #30 PPM1A (ENSECAG00000016814) #32 C24H14orf39 (ENSECAG00000022230) #34 Donkey MODERN SPECIES 27 ENSEASG00005036923 TMEM260 (ENSEASG00005016299) #8 OTX2 (ENSEASG00005026100) #9 EXOC5 (ENSEASG00005016272) #10 AP5M1 (ENSEASG00005016268) #11 NAA30 (ENSEASG00005016267) #12 CCDC198 (ENSEASG00005016260) #13 SLC35F4 (ENSEASG00005016254) #14 ARMH4 (ENSEASG00005016246) #15 ACTR10 (ENSEASG00005016239) #16 PSMA3 (ENSEASG00005016233) #17 ARID4A (ENSEASG00005016222) #18 TOMM20L (ENSEASG00005016218) TIMM9 (ENSEASG00005032848) #20 KIAA0586 (ENSEASG00005016191) #21 DACT1 (ENSEASG00005038443) #22 ENSEASG00005033052 ENSEASG00005034701 DAAM1 (ENSEASG00005016181) #24 GPR135 (ENSEASG00005016178) #25 L3HYPDH (ENSEASG00005016177) JKAMP (ENSEASG00005016175) CCDC175 (ENSEASG00005016172) ENSEASG00005016170 #27 LRRC9 (ENSEASG00005016155) #28 ENSEASG00005016148 #29 ENSEASG00005016146 #29 DHRS7 (ENSEASG00005016143) #30 PPM1A (ENSEASG00005016139) #32 C14orf39 (ENSEASG00005035918) #34 SIX6 (ENSEASG00005016137) #35 Chiroptera ANCESTRAL SPECIES 15 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Microchiroptera ANCESTRAL SPECIES 19 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Greater horseshoe bat MODERN SPECIES 24 EXOC5 (ENSRFEG00010004550) #10 AP5M1 (ENSRFEG00010004511) #11 NAA30 (ENSRFEG00010004478) #12 CCDC198 (ENSRFEG00010004458) #13 SLC35F4 (ENSRFEG00010004439) #14 ENSRFEG00010004425 ARMH4 (ENSRFEG00010004418) #15 ACTR10 (ENSRFEG00010004399) #16 ENSRFEG00010004387 PSMA3 (ENSRFEG00010004363) #17 ENSRFEG00010004355 ARID4A (ENSRFEG00010004329) #18 TOMM20L (ENSRFEG00010004303) TIMM9 (ENSRFEG00010004281) #20 KIAA0586 (ENSRFEG00010004194) #21 DACT1 (ENSRFEG00010004136) #22 ENSRFEG00010004127 DAAM1 (ENSRFEG00010004071) #24 GPR135 (ENSRFEG00010004043) #25 L3HYPDH (ENSRFEG00010004031) JKAMP (ENSRFEG00010004007) CCDC175 (ENSRFEG00010003982) RTN1 (ENSRFEG00010003928) #27 LRRC9 (ENSRFEG00010003818) #28 PCNX4 (ENSRFEG00010003778) #29 DHRS7 (ENSRFEG00010003763) #30 PPM1A (ENSRFEG00010003733) #32 SIX6 (ENSRFEG00010003701) #35 ENSRFEG00010003694 SIX1 (ENSRFEG00010003685) #36 SIX4 (ENSRFEG00010003668) #37 Microbat MODERN SPECIES 1215 CCDC198 (ENSMLUG00000008135) #13 ENSMLUG00000024167 SLC35F4 (ENSMLUG00000017062) #14 ARMH4 (ENSMLUG00000016834) #15 ENSMLUG00000015154 ACTR10 (ENSMLUG00000007553) #16 PSMA3 (ENSMLUG00000007590) #17 ARID4A (ENSMLUG00000012354) #18 TOMM20L (ENSMLUG00000012369) KIAA0586 (ENSMLUG00000012379) #21 DACT1 (ENSMLUG00000007848) #22 DAAM1 (ENSMLUG00000006528) #24 L3HYPDH (ENSMLUG00000004403) JKAMP (ENSMLUG00000004404) CCDC175 (ENSMLUG00000004414) ENSMLUG00000023998 ##27 Megabat MODERN SPECIES 3040 TOMM20L (ENSPVAG00000004558) TIMM9 (ENSPVAG00000004560) #20 KIAA0586 (ENSPVAG00000004563) #21 DACT1 (ENSPVAG00000004564) #22 Atlantogenata ANCESTRAL SPECIES 8 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 Xenarthra ANCESTRAL SPECIES 211 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000155077.e.a ##27 ENSGT00940000155077.e.b ##27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 Armadillo MODERN SPECIES 920 ACTR10 (ENSDNOG00000044797) #16 ENSDNOG00000004077 #17 ARID4A (ENSDNOG00000004090) #18 TIMM9 (ENSDNOG00000014822) #20 KIAA0586 (ENSDNOG00000005182) #21 DACT1 (ENSDNOG00000000222) #22 ENSDNOG00000041175 ENSDNOG00000032645 DAAM1 (ENSDNOG00000003584) #24 GPR135 (ENSDNOG00000033522) #25 L3HYPDH (ENSDNOG00000000230) JKAMP (ENSDNOG00000000232) ENSDNOG00000047569 ##27 ENSDNOG00000015159 ##27 LRRC9 (ENSDNOG00000005731) #28 PCNX4 (ENSDNOG00000004618) #29 DHRS7 (ENSDNOG00000039298) #30 Sloth MODERN SPECIES 5325 ENSCHOG00000010600 #22 Afrotheria ANCESTRAL SPECIES 6 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Afrotheria_a ANCESTRAL SPECIES 6 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.f #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Elephant MODERN SPECIES 602 TMEM260 (ENSLAFG00000021996) #8 OTX2 (ENSLAFG00000031459) #9 ENSLAFG00000027470 EXOC5 (ENSLAFG00000012633) #10 AP5M1 (ENSLAFG00000012643) #11 NAA30 (ENSLAFG00000005556) #12 CCDC198 (ENSLAFG00000027610) #13 SLC35F4 (ENSLAFG00000014182) #14 ARMH4 (ENSLAFG00000011333) #15 ACTR10 (ENSLAFG00000008644) #16 PSMA3 (ENSLAFG00000008648) #17 ARID4A (ENSLAFG00000008653) #18 TOMM20L (ENSLAFG00000008656) ENSLAFG00000008658 #20 KIAA0586 (ENSLAFG00000008659) #21 DACT1 (ENSLAFG00000007484) #22 ENSLAFG00000014987 DAAM1 (ENSLAFG00000001109) #24 GPR135 (ENSLAFG00000023155) #25 L3HYPDH (ENSLAFG00000013961) JKAMP (ENSLAFG00000013965) CCDC175 (ENSLAFG00000013972) ENSLAFG00000032440 RTN1 (ENSLAFG00000021369) #27 LRRC9 (ENSLAFG00000016138) #28 ENSLAFG00000026397 #29 ENSLAFG00000014203 #29 DHRS7 (ENSLAFG00000014209) #30 SIX6 (ENSLAFG00000003106) #35 PPM1A (ENSLAFG00000015838) #32 C14orf39 (ENSLAFG00000011723) #34 Hyrax MODERN SPECIES 4907 DACT1 (ENSPCAG00000008508) #22 Marsupialia ANCESTRAL SPECIES ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Marsupialia_b ANCESTRAL SPECIES ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Diprotodontia ANCESTRAL SPECIES ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Diprotodontia_a ANCESTRAL SPECIES 1 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 koala MODERN SPECIES 24 TMEM260 (ENSPCIG00000017507) #8 OTX2 (ENSPCIG00000032131) #9 EXOC5 (ENSPCIG00000017501) #10 AP5M1 (ENSPCIG00000017500) #11 NAA30 (ENSPCIG00000016155) #12 CCDC198 (ENSPCIG00000017498) #13 SLC35F4 (ENSPCIG00000017494) #14 ARMH4 (ENSPCIG00000017493) #15 ACTR10 (ENSPCIG00000017492) #16 PSMA3 (ENSPCIG00000017491) #17 ARID4A (ENSPCIG00000017482) #18 TOMM20L (ENSPCIG00000017481) TIMM9 (ENSPCIG00000017480) #20 KIAA0586 (ENSPCIG00000017477) #21 ENSPCIG00000035985 DACT1 (ENSPCIG00000017476) #22 ENSPCIG00000033655 ENSPCIG00000020357 DAAM1 (ENSPCIG00000020361) #24 GPR135 (ENSPCIG00000020390) #25 L3HYPDH (ENSPCIG00000020392) JKAMP (ENSPCIG00000020397) ENSPCIG00000020400 ENSPCIG00000020410 #27 ENSPCIG00000020419 #27 LRRC9 (ENSPCIG00000020423) #28 PCNX4 (ENSPCIG00000020430) #29 DHRS7 (ENSPCIG00000020432) #30 PPM1A (ENSPCIG00000020435) #32 SIX6 (ENSPCIG00000020447) #35 SIX1 (ENSPCIG00000034712) #36 Common wonbat MODERN SPECIES 1106 ENSVURG00010017871 EXOC5 (ENSVURG00010017877) #10 AP5M1 (ENSVURG00010017891) #11 NAA30 (ENSVURG00010017904) #12 CCDC198 (ENSVURG00010017910) #13 SLC35F4 (ENSVURG00010017916) #14 ENSVURG00010017920 ENSVURG00010017925 ENSVURG00010017929 #15 ACTR10 (ENSVURG00010017945) #16 PSMA3 (ENSVURG00010017951) #17 ARID4A (ENSVURG00010017963) #18 TOMM20L (ENSVURG00010017980) TIMM9 (ENSVURG00010017986) #20 KIAA0586 (ENSVURG00010017992) #21 DACT1 (ENSVURG00010018006) #22 ENSVURG00010018020 ENSVURG00010018023 DAAM1 (ENSVURG00010018028) #24 ENSVURG00010018035 #26 JKAMP (ENSVURG00010018038) RTN1 (ENSVURG00010018044) #27 LRRC9 (ENSVURG00010018060) #28 PCNX4 (ENSVURG00010018089) #29 DHRS7 (ENSVURG00010018100) #30 PPM1A (ENSVURG00010018120) #32 C14orf39 (ENSVURG00010018124) #34 SIX6 (ENSVURG00010018134) #35 SIX1 (ENSVURG00010018138) #36 SIX4 (ENSVURG00010018145) #37 MNAT1 (ENSVURG00010018151) Wallaby MODERN SPECIES 7215 DACT1 (ENSMEUG00000006818) #22 Tasmanian devil MODERN SPECIES 1 ENSSHAG00000023591 #8 ENSSHAG00000021938 #8 OTX2 (ENSSHAG00000015291) #9 EXOC5 (ENSSHAG00000016552) #10 AP5M1 (ENSSHAG00000016643) #11 NAA30 (ENSSHAG00000016832) #12 CCDC198 (ENSSHAG00000016983) #13 SLC35F4 (ENSSHAG00000017158) #14 ENSSHAG00000017692 #15 ACTR10 (ENSSHAG00000030692) #16 PSMA3 (ENSSHAG00000017955) #17 ARID4A (ENSSHAG00000018032) #18 TIMM9 (ENSSHAG00000018161) #20 KIAA0586 (ENSSHAG00000024604) #21 TOMM20L (ENSSHAG00000018187) DACT1 (ENSSHAG00000018459) #22 ENSSHAG00000022250 DAAM1 (ENSSHAG00000008030) #24 GPR135 (ENSSHAG00000022361) #25 JKAMP (ENSSHAG00000010275) ENSSHAG00000010446 RTN1 (ENSSHAG00000012167) #27 LRRC9 (ENSSHAG00000012833) #28 PCNX4 (ENSSHAG00000013668) #29 DHRS7 (ENSSHAG00000013927) #30 PPM1A (ENSSHAG00000014493) #32 ENSSHAG00000015097 #34 SIX6 (ENSSHAG00000015311) #35 SIX1 (ENSSHAG00000015711) #36 SIX4 (ENSSHAG00000016030) #37 MNAT1 (ENSSHAG00000016338) Opossum MODERN SPECIES TMEM260 (ENSMODG00000007703) #8 ENSMODG00000037723 OTX2 (ENSMODG00000047226) #9 EXOC5 (ENSMODG00000007734) #10 AP5M1 (ENSMODG00000007749) #11 NAA30 (ENSMODG00000007755) #12 ENSMODG00000007762 #13 SLC35F4 (ENSMODG00000007782) #14 ARMH4 (ENSMODG00000007807) #15 ACTR10 (ENSMODG00000007820) #16 PSMA3 (ENSMODG00000007839) #17 ARID4A (ENSMODG00000007881) #18 TOMM20L (ENSMODG00000007892) TIMM9 (ENSMODG00000007898) #20 KIAA0586 (ENSMODG00000008090) #21 DACT1 (ENSMODG00000008148) #22 ENSMODG00000040674 ENSMODG00000049384 DAAM1 (ENSMODG00000008221) #24 GPR135 (ENSMODG00000023965) #25 L3HYPDH (ENSMODG00000008241) JKAMP (ENSMODG00000043526) ENSMODG00000025738 RTN1 (ENSMODG00000008445) #27 LRRC9 (ENSMODG00000008565) #28 PCNX4 (ENSMODG00000008578) #29 DHRS7 (ENSMODG00000008587) #30 PPM1A (ENSMODG00000008615) #32 C14orf39 (ENSMODG00000025739) #34 SIX6 (ENSMODG00000008633) #35 SIX1 (ENSMODG00000049037) #36 Platypus MODERN SPECIES 5 KTN1 (ENSOANG00000001899) PELI2 (ENSOANG00000050955) #7 TMEM260 (ENSOANG00000004904) #8 OTX2 (ENSOANG00000045323) #9 EXOC5 (ENSOANG00000011830) #10 AP5M1 (ENSOANG00000011831) #11 NAA30 (ENSOANG00000050687) #12 ENSOANG00000020538 #13 SLC35F4 (ENSOANG00000011833) #14 ENSOANG00000015097 #15 ACTR10 (ENSOANG00000011834) #16 PSMA3 (ENSOANG00000011835) #17 ARID4A (ENSOANG00000011836) #18 ENSOANG00000039737 ENSOANG00000011837 #21 DACT1 (ENSOANG00000048620) #22 ENSOANG00000036720 DAAM1 (ENSOANG00000011840) #24 L3HYPDH (ENSOANG00000044494) JKAMP (ENSOANG00000011847) ENSOANG00000036881 RTN1 (ENSOANG00000011849) #27 LRRC9 (ENSOANG00000011851) #28 PCNX4 (ENSOANG00000011855) #29 PPM1A (ENSOANG00000011857) #32 ENSOANG00000011859 #34 SIX6 (ENSOANG00000036455) #35 SIX1 (ENSOANG00000048161) #36 SIX4 (ENSOANG00000037971) #37 MNAT1 (ENSOANG00000009088) TRMT5 (ENSOANG00000050880) Sauria ANCESTRAL SPECIES 3 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Archelosauria ANCESTRAL SPECIES 2 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Cryptodira ANCESTRAL SPECIES 38 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Testudinoidea ANCESTRAL SPECIES 3 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Testudinidae ANCESTRAL SPECIES 43 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Goode s thornscrub tortoise MODERN SPECIES 18 ENSGEVG00005002547 TMEM260 (ENSGEVG00005002559) #8 OTX2 (ENSGEVG00005002569) #9 EXOC5 (ENSGEVG00005002581) #10 AP5M1 (ENSGEVG00005002607) #11 NAA30 (ENSGEVG00005002629) #12 CCDC198 (ENSGEVG00005002639) #13 SLC35F4 (ENSGEVG00005002650) #14 ARMH4 (ENSGEVG00005002659) #15 ACTR10 (ENSGEVG00005002670) #16 PSMA3 (ENSGEVG00005002683) #17 ARID4A (ENSGEVG00005002716) #18 TOMM20L (ENSGEVG00005002765) TIMM9 (ENSGEVG00005002781) #20 KIAA0586 (ENSGEVG00005002832) #21 DACT1 (ENSGEVG00005002912) #22 ENSGEVG00005002922 #24 ENSGEVG00005002934 #24 GPR135 (ENSGEVG00005000091) #25 L3HYPDH (ENSGEVG00005000117) JKAMP (ENSGEVG00005000144) ENSGEVG00005000175 #27 LRRC9 (ENSGEVG00005000248) #28 PCNX4 (ENSGEVG00005000426) #29 DHRS7 (ENSGEVG00005000446) #30 PPM1A (ENSGEVG00005000468) #32 SIX6 (ENSGEVG00005000484) #35 SIX1 (ENSGEVG00005000499) #36 ENSGEVG00005000529 #37 MNAT1 (ENSGEVG00005000570) TRMT5 (ENSGEVG00005000627) Abingdon island giant tortoise MODERN SPECIES 434 ARMH4 (ENSCABG00000018536) #15 ACTR10 (ENSCABG00000018537) #16 PSMA3 (ENSCABG00000018539) #17 ARID4A (ENSCABG00000018541) #18 TIMM9 (ENSCABG00000018542) #20 KIAA0586 (ENSCABG00000018544) #21 DACT1 (ENSCABG00000018545) #22 Emydidae ANCESTRAL SPECIES 43 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Three-toed box turtle MODERN SPECIES 87 PELI2 (ENSTMTG00000020222) #7 ENSTMTG00000020215 TMEM260 (ENSTMTG00000020185) #8 OTX2 (ENSTMTG00000020173) #9 EXOC5 (ENSTMTG00000020151) #10 AP5M1 (ENSTMTG00000020142) #11 NAA30 (ENSTMTG00000020135) #12 CCDC198 (ENSTMTG00000020126) #13 SLC35F4 (ENSTMTG00000020114) #14 ARMH4 (ENSTMTG00000020106) #15 ACTR10 (ENSTMTG00000020080) #16 PSMA3 (ENSTMTG00000020053) #17 ARID4A (ENSTMTG00000019991) #18 ENSTMTG00000019985 KIAA0586 (ENSTMTG00000019833) #21 DACT1 (ENSTMTG00000019805) #22 ENSTMTG00000019789 DAAM1 (ENSTMTG00000019760) #24 GPR135 (ENSTMTG00000019746) #25 L3HYPDH (ENSTMTG00000019739) JKAMP (ENSTMTG00000019727) ENSTMTG00000019705 #27 ENSTMTG00000019695 LRRC9 (ENSTMTG00000019555) #28 PCNX4 (ENSTMTG00000019526) #29 DHRS7 (ENSTMTG00000019513) #30 PPM1A (ENSTMTG00000019503) #32 SIX6 (ENSTMTG00000019495) #35 SIX1 (ENSTMTG00000019488) #36 SIX4 (ENSTMTG00000019458) #37 MNAT1 (ENSTMTG00000019436) painted turtle MODERN SPECIES 756 PELI2 (ENSCPBG00000024788) #7 TMEM260 (ENSCPBG00000024790) #8 OTX2 (ENSCPBG00000024794) #9 EXOC5 (ENSCPBG00000024798) #10 AP5M1 (ENSCPBG00000024799) #11 NAA30 (ENSCPBG00000024800) #12 CCDC198 (ENSCPBG00000024802) #13 SLC35F4 (ENSCPBG00000024804) #14 ARMH4 (ENSCPBG00000024805) #15 ACTR10 (ENSCPBG00000024806) #16 PSMA3 (ENSCPBG00000024808) #17 ARID4A (ENSCPBG00000024815) #18 TOMM20L (ENSCPBG00000024845) KIAA0586 (ENSCPBG00000024832) #21 TIMM9 (ENSCPBG00000024847) #20 DACT1 (ENSCPBG00000024848) #22 GRIP1 (ENSCPBG00000024853) HELB (ENSCPBG00000024857) TMBIM4 (ENSCPBG00000024858) LLPH (ENSCPBG00000024859) ENSCPBG00000024862 ENSCPBG00000024864 Chinese turtle MODERN SPECIES 2037 EXOC5 (ENSPSIG00000009250) #10 AP5M1 (ENSPSIG00000010971) #11 NAA30 (ENSPSIG00000011241) #12 CCDC198 (ENSPSIG00000011936) #13 SLC35F4 (ENSPSIG00000012025) #14 ENSPSIG00000000525 ENSPSIG00000012383 #15 ENSPSIG00000012592 #15 ACTR10 (ENSPSIG00000012644) #16 PSMA3 (ENSPSIG00000014260) #17 ARID4A (ENSPSIG00000014845) #18 TIMM9 (ENSPSIG00000015859) #20 KIAA0586 (ENSPSIG00000016909) #21 DACT1 (ENSPSIG00000000545) #22 ENSPSIG00000005133 DAAM1 (ENSPSIG00000005199) #24 L3HYPDH (ENSPSIG00000005457) JKAMP (ENSPSIG00000005463) RTN1 (ENSPSIG00000005486) #27 ENSPSIG00000005617 #28 ENSPSIG00000005788 #28 PCNX4 (ENSPSIG00000005798) #29 DHRS7 (ENSPSIG00000006028) #30 Archosauria ANCESTRAL SPECIES 5 ENSGT00940000158237 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Aves ANCESTRAL SPECIES 2 ENSGT00940000158237 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT01050000244827.D.b.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000155077 #27 ENSGT00940000170020 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Neognathae ANCESTRAL SPECIES 4 ENSGT00940000158237 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT01050000244827.D.b.a.g ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000155077 #27 ENSGT00940000170020 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Neognathae_b ANCESTRAL SPECIES 6 ENSGT00940000158237 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT01050000244827.D.b.a.g ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000155077 #27 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 Passeriformes ANCESTRAL SPECIES 5 ENSGT00940000158237 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT01050000244827.D.b.a.g.f.a ENSGT01050000244827.D.b.a.g.f.b ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000155077 #27 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Great tit MODERN SPECIES 25 ENSPMJG00000003486 PELI2 (ENSPMJG00000003476) #7 TMEM260 (ENSPMJG00000003404) #8 OTX2 (ENSPMJG00000003401) #9 EXOC5 (ENSPMJG00000003341) #10 AP5M1 (ENSPMJG00000003336) #11 NAA30 (ENSPMJG00000003327) #12 CCDC198 (ENSPMJG00000003319) #13 SLC35F4 (ENSPMJG00000003288) #14 ARMH4 (ENSPMJG00000003213) #15 ACTR10 (ENSPMJG00000003159) #16 PSMA3 (ENSPMJG00000003153) #17 ARID4A (ENSPMJG00000002697) #18 TIMM9 (ENSPMJG00000002691) #20 KIAA0586 (ENSPMJG00000002665) #21 DACT1 (ENSPMJG00000002557) #22 ENSPMJG00000002430 DAAM1 (ENSPMJG00000002388) #24 GPR135 (ENSPMJG00000002377) #25 L3HYPDH (ENSPMJG00000002365) JKAMP (ENSPMJG00000002359) RTN1 (ENSPMJG00000002328) #27 PCNX4 (ENSPMJG00000002265) #29 DHRS7 (ENSPMJG00000002228) #30 PPM1A (ENSPMJG00000002202) #32 C14orf39 (ENSPMJG00000002153) #34 SIX6 (ENSPMJG00000002148) #35 SIX1 (ENSPMJG00000002144) #36 SIX4 (ENSPMJG00000002136) #37 MNAT1 (ENSPMJG00000002122) TRMT5 (ENSPMJG00000002107) Passeriformes_d ANCESTRAL SPECIES 5 ENSGT00940000158237 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT01050000244827.D.b.a.g.f.a ENSGT01050000244827.D.b.a.g.f.b ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000155077 #27 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Flycatcher MODERN SPECIES 24 KTN1 (ENSFALG00000003725) PELI2 (ENSFALG00000003719) #7 TMEM260 (ENSFALG00000003715) #8 OTX2 (ENSFALG00000003708) #9 EXOC5 (ENSFALG00000003680) #10 AP5M1 (ENSFALG00000003651) #11 NAA30 (ENSFALG00000003631) #12 CCDC198 (ENSFALG00000003624) #13 SLC35F4 (ENSFALG00000003614) #14 ARMH4 (ENSFALG00000003608) #15 ACTR10 (ENSFALG00000003589) #16 PSMA3 (ENSFALG00000003573) #17 ARID4A (ENSFALG00000003561) #18 TIMM9 (ENSFALG00000025871) #20 KIAA0586 (ENSFALG00000003543) #21 DACT1 (ENSFALG00000003535) #22 ENSFALG00000003527 ENSFALG00000003526 L3HYPDH (ENSFALG00000003479) JKAMP (ENSFALG00000024090) RTN1 (ENSFALG00000023963) #27 PCNX4 (ENSFALG00000003459) #29 DHRS7 (ENSFALG00000003458) #30 PPM1A (ENSFALG00000003457) #32 C14orf39 (ENSFALG00000003456) #34 SIX6 (ENSFALG00000003455) #35 SIX1 (ENSFALG00000027694) #36 SIX4 (ENSFALG00000027107) #37 ENSFALG00000028214 MNAT1 (ENSFALG00000003436) TRMT5 (ENSFALG00000003430) Passeriformes_g ANCESTRAL SPECIES ENSGT00940000158237 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT01050000244827.D.b.a.g.f.a ENSGT01050000244827.D.b.a.g.f.b ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000155077 #27 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Medium ground finch MODERN SPECIES 6 TBPL2 (ENSGFOG00000002196) KTN1 (ENSGFOG00000001982) PELI2 (ENSGFOG00000001948) #7 TMEM260 (ENSGFOG00000001917) #8 OTX2 (ENSGFOG00000001897) #9 EXOC5 (ENSGFOG00000001880) #10 AP5M1 (ENSGFOG00000001815) #11 NAA30 (ENSGFOG00000001774) #12 SLC35F4 (ENSGFOG00000001755) #14 ARMH4 (ENSGFOG00000001734) #15 ACTR10 (ENSGFOG00000001693) #16 PSMA3 (ENSGFOG00000001621) #17 ARID4A (ENSGFOG00000001108) #18 TIMM9 (ENSGFOG00000001009) #20 KIAA0586 (ENSGFOG00000000988) #21 DACT1 (ENSGFOG00000000977) #22 ENSGFOG00000000968 ENSGFOG00000000961 ENSGFOG00000000955 DAAM1 (ENSGFOG00000000911) #24 ENSGFOG00000000890 #26 JKAMP (ENSGFOG00000000883) ENSGFOG00000000870 #27 PCNX4 (ENSGFOG00000000864) #29 DHRS7 (ENSGFOG00000000856) #30 PPM1A (ENSGFOG00000000847) #32 SIX6 (ENSGFOG00000000845) #35 SIX1 (ENSGFOG00000000841) #36 SIX4 (ENSGFOG00000000832) #37 MNAT1 (ENSGFOG00000000822) TRMT5 (ENSGFOG00000000815) Passeroidea ANCESTRAL SPECIES 1 ENSGT00940000158237 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT01050000244827.D.b.a.g.f.a ENSGT01050000244827.D.b.a.g.f.b ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000155077 #27 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Zebra finch MODERN SPECIES 27 TBPL2 (ENSTGUG00000013070) KTN1 (ENSTGUG00000013063) PELI2 (ENSTGUG00000026455) #7 TMEM260 (ENSTGUG00000013057) #8 OTX2 (ENSTGUG00000013055) #9 EXOC5 (ENSTGUG00000013051) #10 AP5M1 (ENSTGUG00000013050) #11 NAA30 (ENSTGUG00000026471) #12 CCDC198 (ENSTGUG00000020389) #13 SLC35F4 (ENSTGUG00000013048) #14 ARMH4 (ENSTGUG00000021718) #15 ACTR10 (ENSTGUG00000013040) #16 PSMA3 (ENSTGUG00000013036) #17 ARID4A (ENSTGUG00000013032) #18 TIMM9 (ENSTGUG00000013029) #20 DACT1 (ENSTGUG00000013023) #22 ENSTGUG00000013021 ENSTGUG00000020508 DAAM1 (ENSTGUG00000013012) #24 GPR135 (ENSTGUG00000021446) #25 L3HYPDH (ENSTGUG00000013009) JKAMP (ENSTGUG00000013008) RTN1 (ENSTGUG00000013003) #27 PCNX4 (ENSTGUG00000013002) #29 DHRS7 (ENSTGUG00000013000) #30 PPM1A (ENSTGUG00000022913) #32 C14orf39 (ENSTGUG00000022024) #34 SIX6 (ENSTGUG00000012995) #35 SIX1 (ENSTGUG00000024190) #36 SIX4 (ENSTGUG00000026366) #37 MNAT1 (ENSTGUG00000012990) Common canary MODERN SPECIES 3 PPM1A (ENSSCAG00000005263) #32 PELI2 (ENSSCAG00000005266) #7 TMEM260 (ENSSCAG00000005274) #8 OTX2 (ENSSCAG00000005303) #9 EXOC5 (ENSSCAG00000005307) #10 AP5M1 (ENSSCAG00000005309) #11 NAA30 (ENSSCAG00000005313) #12 CCDC198 (ENSSCAG00000005317) #13 SLC35F4 (ENSSCAG00000005323) #14 ARMH4 (ENSSCAG00000005328) #15 ACTR10 (ENSSCAG00000005334) #16 PSMA3 (ENSSCAG00000005340) #17 ARID4A (ENSSCAG00000005371) #18 TIMM9 (ENSSCAG00000005377) #20 KIAA0586 (ENSSCAG00000005383) #21 DACT1 (ENSSCAG00000005405) #22 ENSSCAG00000005412 ENSSCAG00000005415 DAAM1 (ENSSCAG00000005439) #24 L3HYPDH (ENSSCAG00000005873) JKAMP (ENSSCAG00000005877) ENSSCAG00000005888 #27 SIX6 (ENSSCAG00000005902) #35 SIX1 (ENSSCAG00000005907) #36 MNAT1 (ENSSCAG00000005917) TRMT5 (ENSSCAG00000005920) SLC38A6 (ENSSCAG00000005924) PRKCH (ENSSCAG00000005933) HIF1A (ENSSCAG00000005942) SNAPC1 (ENSSCAG00000005949) ENSSCAG00000005952 Neognathae_c ANCESTRAL SPECIES 6 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00960000189593 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000155077 #27 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Kakapo MODERN SPECIES 21 AP5M1 (ENSSHBG00005005006) #11 ENSSHBG00005005003 NAA30 (ENSSHBG00005005000) #12 ENSSHBG00005004997 SLC35F4 (ENSSHBG00005004992) #14 ARMH4 (ENSSHBG00005004984) #15 ENSSHBG00005004978 ENSSHBG00005004974 ENSSHBG00005004966 ENSSHBG00005004957 ACTR10 (ENSSHBG00005004946) #16 PSMA3 (ENSSHBG00005004936) #17 ARID4A (ENSSHBG00005004920) #18 TIMM9 (ENSSHBG00005004908) #20 KIAA0586 (ENSSHBG00005004883) #21 DACT1 (ENSSHBG00005004863) #22 ENSSHBG00005004842 ENSSHBG00005004820 ENSSHBG00005004814 ENSSHBG00005004809 DNAL1 (ENSSHBG00005004800) MIDEAS (ENSSHBG00005004781) PTGR2 (ENSSHBG00005004757) TMEM62 (ENSSHBG00005004749) UBR1 (ENSSHBG00005004491) ENSSHBG00005004424 ENSSHBG00005004416 ENSSHBG00005004400 ENSSHBG00005004395 ENSSHBG00005004370 ENSSHBG00005004346 Golden eagle MODERN SPECIES 11 KTN1 (ENSACCG00020004438) PELI2 (ENSACCG00020004512) #7 ENSACCG00020009462 ENSACCG00020009484 EXOC5 (ENSACCG00020009509) #10 AP5M1 (ENSACCG00020009528) #11 NAA30 (ENSACCG00020009541) #12 CCDC198 (ENSACCG00020009554) #13 SLC35F4 (ENSACCG00020009568) #14 ARMH4 (ENSACCG00020009606) #15 ACTR10 (ENSACCG00020009631) #16 PSMA3 (ENSACCG00020009648) #17 ARID4A (ENSACCG00020009778) #18 TIMM9 (ENSACCG00020009851) #20 KIAA0586 (ENSACCG00020009889) #21 DACT1 (ENSACCG00020009927) #22 ENSACCG00020009935 ENSACCG00020009941 ENSACCG00020009944 ENSACCG00020009956 ENSACCG00020009964 ENSACCG00020009974 ENSACCG00020009981 ENSACCG00020009986 #24 GPR135 (ENSACCG00020009995) #25 L3HYPDH (ENSACCG00020010006) JKAMP (ENSACCG00020010017) RTN1 (ENSACCG00020010038) #27 PCNX4 (ENSACCG00020010056) #29 DHRS7 (ENSACCG00020010064) #30 PPM1A (ENSACCG00020010079) #32 Galloanserae ANCESTRAL SPECIES 4 ENSGT00940000158237 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT01050000244827.D.b.a.g ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000155077 #27 ENSGT00940000170020 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Anatidae ANCESTRAL SPECIES 9 ENSGT00940000159561 ENSGT00940000158237 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT01050000244827.D.b.a.g.b.a ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000155077 #27 ENSGT00940000170020 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Pink-footed goose MODERN SPECIES 56 TBPL2 (ENSABRG00000012912) KTN1 (ENSABRG00000012924) PELI2 (ENSABRG00000013012) #7 TMEM260 (ENSABRG00000013023) #8 OTX2 (ENSABRG00000013040) #9 EXOC5 (ENSABRG00000013062) #10 AP5M1 (ENSABRG00000013069) #11 NAA30 (ENSABRG00000013081) #12 SLC35F4 (ENSABRG00000013099) #14 ARMH4 (ENSABRG00000013125) #15 ACTR10 (ENSABRG00000013140) #16 PSMA3 (ENSABRG00000013193) #17 ARID4A (ENSABRG00000013291) #18 TIMM9 (ENSABRG00000013463) #20 KIAA0586 (ENSABRG00000013478) #21 DACT1 (ENSABRG00000013488) #22 ENSABRG00000013495 ENSABRG00000013496 DAAM1 (ENSABRG00000013503) #24 GPR135 (ENSABRG00000013512) #25 ENSABRG00000013516 #26 JKAMP (ENSABRG00000013527) ENSABRG00000013538 ENSABRG00000013557 #27 ENSABRG00000013565 PCNX4 (ENSABRG00000013653) #29 DHRS7 (ENSABRG00000013664) #30 PPM1A (ENSABRG00000013674) #32 C14orf39 (ENSABRG00000013685) #34 SIX4 (ENSABRG00000013704) #37 MNAT1 (ENSABRG00000013710) Duck MODERN SPECIES 23 TBPL2 (ENSAPLG00000006951) KTN1 (ENSAPLG00000012978) PELI2 (ENSAPLG00000008440) #7 TMEM260 (ENSAPLG00000008287) #8 OTX2 (ENSAPLG00000030438) #9 EXOC5 (ENSAPLG00000002629) #10 AP5M1 (ENSAPLG00000001799) #11 NAA30 (ENSAPLG00000001619) #12 SLC35F4 (ENSAPLG00000001042) #14 ARMH4 (ENSAPLG00000000800) #15 ACTR10 (ENSAPLG00000016109) #16 PSMA3 (ENSAPLG00000015841) #17 ARID4A (ENSAPLG00000006185) #18 ENSAPLG00000025019 KIAA0586 (ENSAPLG00000007055) #21 DACT1 (ENSAPLG00000017056) #22 ENSAPLG00000009366 DAAM1 (ENSAPLG00000013283) #24 GPR135 (ENSAPLG00000029388) #25 L3HYPDH (ENSAPLG00000028035) JKAMP (ENSAPLG00000014595) ENSAPLG00000014704 RTN1 (ENSAPLG00000014979) #27 ENSAPLG00000005575 PCNX4 (ENSAPLG00000005544) #29 DHRS7 (ENSAPLG00000005318) #30 PPM1A (ENSAPLG00000005121) #32 C14orf39 (ENSAPLG00000004918) #34 SIX6 (ENSAPLG00000004766) #35 ENSAPLG00000024283 SIX1 (ENSAPLG00000008206) #36 Phasianidae ANCESTRAL SPECIES 4 ENSGT00940000158237 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT01050000244827.D.b.a.h ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000155077 #27 ENSGT00940000170020 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 Japanese quail MODERN SPECIES 23 KTN1 (ENSCJPG00005006192) PELI2 (ENSCJPG00005006186) #7 TMEM260 (ENSCJPG00005006182) #8 OTX2 (ENSCJPG00005006178) #9 EXOC5 (ENSCJPG00005006164) #10 AP5M1 (ENSCJPG00005006162) #11 NAA30 (ENSCJPG00005006116) #12 ENSCJPG00005006115 SLC35F4 (ENSCJPG00005006099) #14 ARMH4 (ENSCJPG00005006085) #15 ACTR10 (ENSCJPG00005006073) #16 PSMA3 (ENSCJPG00005006015) #17 ARID4A (ENSCJPG00005005700) #18 TIMM9 (ENSCJPG00005005692) #20 KIAA0586 (ENSCJPG00005005686) #21 DACT1 (ENSCJPG00005005685) #22 ENSCJPG00005005665 ENSCJPG00005005663 ENSCJPG00005005662 #24 ENSCJPG00005005659 #24 GPR135 (ENSCJPG00005005656) #25 L3HYPDH (ENSCJPG00005005653) JKAMP (ENSCJPG00005005651) ENSCJPG00005005628 RTN1 (ENSCJPG00005005613) #27 ENSCJPG00005005511 PCNX4 (ENSCJPG00005005503) #29 DHRS7 (ENSCJPG00005005497) #30 ENSCJPG00005005494 PPM1A (ENSCJPG00005005489) #32 SIX6 (ENSCJPG00005005472) #35 Phasianidae_b ANCESTRAL SPECIES 3 ENSGT00940000158237 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000155077 #27 ENSGT00940000170020 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00390000010439 #34 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 Chicken MODERN SPECIES 34 PELI2 (ENSGALG00010018415) #7 TMEM260 (ENSGALG00010018406) #8 OTX2 (ENSGALG00010019688) #9 EXOC5 (ENSGALG00010017252) #10 AP5M1 (ENSGALG00010017201) #11 NAA30 (ENSGALG00010017185) #12 CCDC198 (ENSGALG00010017169) #13 SLC35F4 (ENSGALG00010017153) #14 ARMH4 (ENSGALG00010017452) #15 ENSGALG00010020524 #16 ACTR10 (ENSGALG00010017435) #16 PSMA3 (ENSGALG00010017428) #17 ARID4A (ENSGALG00010017384) #18 TIMM9 (ENSGALG00010017363) TA3 (ENSGALG00010017341) #21 DACT1 (ENSGALG00010017290) #22 KCNK4 (ENSGALG00010017284) ENSGALG00010019806 ENSGALG00010019805 ENSGALG00010019795 ENSGALG00010019776 ENSGALG00010019759 ENSGALG00010019748 ENSGALG00010020144 ENSGALG00010020139 ENSGALG00010019728 ENSGALG00010020135 DAAM1 (ENSGALG00010017098) #24 GPR135 (ENSGALG00010017055) #25 L3HYPDH (ENSGALG00010017050) JKAMP (ENSGALG00010017041) Turkey MODERN SPECIES 25 PELI2 (ENSMGAG00000013672) #7 TMEM260 (ENSMGAG00000013639) #8 OTX2 (ENSMGAG00000022347) #9 EXOC5 (ENSMGAG00000013632) #10 AP5M1 (ENSMGAG00000013628) #11 NAA30 (ENSMGAG00000013627) #12 CCDC198 (ENSMGAG00000013624) #13 SLC35F4 (ENSMGAG00000013622) #14 ARMH4 (ENSMGAG00000013621) #15 ENSMGAG00000013619 #16 ENSMGAG00000021224 #16 PSMA3 (ENSMGAG00000013617) #17 ARID4A (ENSMGAG00000013615) #18 ENSMGAG00000013614 KIAA0586 (ENSMGAG00000013612) #21 DACT1 (ENSMGAG00000013611) #22 ENSMGAG00000013609 ENSMGAG00000021915 #26 GPR135 (ENSMGAG00000017574) #25 JKAMP (ENSMGAG00000013596) RTN1 (ENSMGAG00000013590) #27 ENSMGAG00000013584 PCNX4 (ENSMGAG00000013581) #29 DHRS7 (ENSMGAG00000013578) #30 PPM1A (ENSMGAG00000013576) #32 C14orf39 (ENSMGAG00000013574) #34 SIX4 (ENSMGAG00000013569) #37 MNAT1 (ENSMGAG00000013566) TRMT5 (ENSMGAG00000013565) SLC38A6 (ENSMGAG00000013563) PRKCH (ENSMGAG00000013557) African ostrich MODERN SPECIES 471 PELI2 (ENSSCUG00000008055) #7 TMEM260 (ENSSCUG00000008059) #8 ENSSCUG00000008061 OTX2 (ENSSCUG00000008062) #9 EXOC5 (ENSSCUG00000008066) #10 AP5M1 (ENSSCUG00000008079) #11 NAA30 (ENSSCUG00000008082) #12 ENSSCUG00000008083 #13 SLC35F4 (ENSSCUG00000008084) #14 ARMH4 (ENSSCUG00000008085) #15 ACTR10 (ENSSCUG00000008086) #16 PSMA3 (ENSSCUG00000008092) #17 ARID4A (ENSSCUG00000008134) #18 TIMM9 (ENSSCUG00000008143) #20 KIAA0586 (ENSSCUG00000008148) #21 DACT1 (ENSSCUG00000008177) #22 ENSSCUG00000008187 ENSSCUG00000008189 DAAM1 (ENSSCUG00000008197) #24 ENSSCUG00000008202 #26 JKAMP (ENSSCUG00000008203) RTN1 (ENSSCUG00000008208) #27 ENSSCUG00000008212 PCNX4 (ENSSCUG00000008219) #29 DHRS7 (ENSSCUG00000008220) #30 PPM1A (ENSSCUG00000008223) #32 C14orf39 (ENSSCUG00000008225) #34 SIX4 (ENSSCUG00000008229) #37 MNAT1 (ENSSCUG00000008232) ENSSCUG00000008233 TRMT5 (ENSSCUG00000008237) Australian saltwater crocodile MODERN SPECIES 64 KTN1 (ENSCPRG00005017124) PELI2 (ENSCPRG00005017870) #7 TMEM260 (ENSCPRG00005017876) #8 OTX2 (ENSCPRG00005017888) #9 EXOC5 (ENSCPRG00005017897) #10 AP5M1 (ENSCPRG00005017901) #11 NAA30 (ENSCPRG00005017906) #12 ENSCPRG00005017907 SLC35F4 (ENSCPRG00005017910) #14 ARMH4 (ENSCPRG00005017913) #15 ACTR10 (ENSCPRG00005017915) #16 PSMA3 (ENSCPRG00005017923) #17 ARID4A (ENSCPRG00005017932) #18 TIMM9 (ENSCPRG00005017936) #20 KIAA0586 (ENSCPRG00005017940) #21 DACT1 (ENSCPRG00005017955) #22 ENSCPRG00005017963 DAAM1 (ENSCPRG00005017967) #24 L3HYPDH (ENSCPRG00005017978) JKAMP (ENSCPRG00005017982) RTN1 (ENSCPRG00005017988) #27 LRRC9 (ENSCPRG00005018001) #28 PCNX4 (ENSCPRG00005018012) #29 DHRS7 (ENSCPRG00005018018) #30 PPM1A (ENSCPRG00005018023) #32 SIX6 (ENSCPRG00005018029) #35 SIX4 (ENSCPRG00005018032) #37 MNAT1 (ENSCPRG00005018041) TRMT5 (ENSCPRG00005018050) SLC38A6 (ENSCPRG00005018056) PRKCH (ENSCPRG00005018065) Lepidosauria ANCESTRAL SPECIES 32 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 ENSGT00940000153304.B tuatara MODERN SPECIES 698 NAA30 (ENSSPUG00000018392) #12 SLC35F4 (ENSSPUG00000018384) #14 ACTR10 (ENSSPUG00000018378) #16 PSMA3 (ENSSPUG00000018370) #17 ARID4A (ENSSPUG00000018360) #18 TIMM9 (ENSSPUG00000018346) #20 KIAA0586 (ENSSPUG00000018331) #21 DACT1 (ENSSPUG00000018322) #22 ENSSPUG00000018314 #24 ENSSPUG00000018310 #24 ENSSPUG00000018306 #24 ENSSPUG00000018303 #24 GPR135 (ENSSPUG00000018298) #25 ENSSPUG00000018289 #26 JKAMP (ENSSPUG00000018273) ENSSPUG00000018262 #27 Episquamata ANCESTRAL SPECIES ENSGT00390000012816 #15 ENSGT00390000008727.a.b #14 ENSGT00390000001071 #13 ENSGT00390000005665 #12 ENSGT00390000006191 #11 ENSGT00390000012837 #10 ENSGT00940000155014 #9 ENSGT00390000013544 #8 ENSGT00950000183050.b.a #7 ENSGT00940000158237 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 ENSGT00940000153304.B Toxicofera ANCESTRAL SPECIES 5 ENSGT00390000008727.a.b #14 ENSGT00990000211542 ENSGT00390000001071 #13 ENSGT00390000005665 #12 ENSGT00390000006191 #11 ENSGT00390000012837 #10 ENSGT00940000155014 #9 ENSGT00390000013544 #8 ENSGT00950000183050.b.a #7 ENSGT00940000158237 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 ENSGT00940000153304.B Elapidae ANCESTRAL SPECIES 3 ENSGT00390000008727.a.b #14 ENSGT00990000211542 ENSGT00390000001071 #13 ENSGT00390000005665 #12 ENSGT00390000006191 #11 ENSGT00390000012837 #10 ENSGT00940000155014 #9 ENSGT00390000013544 #8 ENSGT00950000183050.b.a #7 ENSGT00940000158237 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452.k #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 ENSGT00940000153304.B Elapidae_a ANCESTRAL SPECIES 10 ENSGT00910000144250 #16 ENSGT00390000008727.a.b #14 ENSGT00990000211542 ENSGT00390000005665 #12 ENSGT00390000006191 #11 ENSGT00390000012837 #10 ENSGT00940000155014 #9 ENSGT00390000013544 #8 ENSGT00950000183050.b.a #7 ENSGT00940000158237 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452.k #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 ENSGT00940000153304.B Acanthophiinae ANCESTRAL SPECIES 13 ENSGT00910000144250 #16 ENSGT00390000008727.a.b #14 ENSGT00990000211542 ENSGT00390000005665 #12 ENSGT00390000006191 #11 ENSGT00390000012837 #10 ENSGT00940000155014 #9 ENSGT00390000013544 #8 ENSGT00950000183050.b.a #7 ENSGT00940000158237 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452.k #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 ENSGT00940000153304.B Mainland tiger snake MODERN SPECIES 31 ACTR10 (ENSNSUG00000019288) #16 SLC35F4 (ENSNSUG00000019287) #14 ENSNSUG00000019286 NAA30 (ENSNSUG00000019285) #12 AP5M1 (ENSNSUG00000019284) #11 EXOC5 (ENSNSUG00000019283) #10 OTX2 (ENSNSUG00000019281) #9 ENSNSUG00000019279 #8 PELI2 (ENSNSUG00000019278) #7 KTN1 (ENSNSUG00000019277) PSMA3 (ENSNSUG00000019276) #17 ARID4A (ENSNSUG00000019275) #18 TOMM20L (ENSNSUG00000019274) TIMM9 (ENSNSUG00000019273) #20 KIAA0586 (ENSNSUG00000019272) #21 DACT1 (ENSNSUG00000019271) #22 DAAM1 (ENSNSUG00000019117) #24 GPR135 (ENSNSUG00000019116) #25 L3HYPDH (ENSNSUG00000019115) JKAMP (ENSNSUG00000019114) RTN1 (ENSNSUG00000019113) #27 LRRC9 (ENSNSUG00000019112) #28 PCNX4 (ENSNSUG00000019111) #29 DHRS7 (ENSNSUG00000019110) #30 PPM1A (ENSNSUG00000019109) #32 SIX6 (ENSNSUG00000019108) #35 SIX1 (ENSNSUG00000019107) #36 SIX4 (ENSNSUG00000019106) #37 MNAT1 (ENSNSUG00000019105) TRMT5 (ENSNSUG00000019104) SLC38A6 (ENSNSUG00000019102) Eastern brown snake MODERN SPECIES 10 ACTR10 (ENSPTXG00000001405) #16 SLC35F4 (ENSPTXG00000001402) #14 ENSPTXG00000001400 NAA30 (ENSPTXG00000001399) #12 AP5M1 (ENSPTXG00000001397) #11 EXOC5 (ENSPTXG00000001393) #10 OTX2 (ENSPTXG00000001391) #9 TMEM260 (ENSPTXG00000001385) #8 PELI2 (ENSPTXG00000001377) #7 KTN1 (ENSPTXG00000001325) PSMA3 (ENSPTXG00000001310) #17 ARID4A (ENSPTXG00000001303) #18 TOMM20L (ENSPTXG00000001300) TIMM9 (ENSPTXG00000001298) #20 KIAA0586 (ENSPTXG00000001294) #21 DACT1 (ENSPTXG00000001292) #22 ENSPTXG00000001288 DAAM1 (ENSPTXG00000000641) #24 GPR135 (ENSPTXG00000000598) #25 L3HYPDH (ENSPTXG00000000595) JKAMP (ENSPTXG00000000592) ENSPTXG00000000586 #27 LRRC9 (ENSPTXG00000000468) #28 PCNX4 (ENSPTXG00000000426) #29 DHRS7 (ENSPTXG00000000395) #30 PPM1A (ENSPTXG00000000380) #32 SIX6 (ENSPTXG00000000369) #35 SIX1 (ENSPTXG00000000366) #36 SIX4 (ENSPTXG00000000355) #37 MNAT1 (ENSPTXG00000000344) TRMT5 (ENSPTXG00000000327) Blue-lipped sea krait MODERN SPECIES 4750 PSMA3 (ENSLLTG00000018158) #17 ARID4A (ENSLLTG00000018152) #18 TOMM20L (ENSLLTG00000018148) TIMM9 (ENSLLTG00000018145) #20 KIAA0586 (ENSLLTG00000018137) #21 DACT1 (ENSLLTG00000018133) #22 Indian cobra MODERN SPECIES SLC35F4 (ENSNNAG00000005228) #14 ENSNNAG00000005220 CCDC198 (ENSNNAG00000005201) #13 NAA30 (ENSNNAG00000005185) #12 AP5M1 (ENSNNAG00000005163) #11 EXOC5 (ENSNNAG00000005063) #10 OTX2 (ENSNNAG00000005044) #9 ENSNNAG00000005014 #8 ENSNNAG00000004973 #8 PELI2 (ENSNNAG00000004953) #7 KTN1 (ENSNNAG00000004514) PSMA3 (ENSNNAG00000004406) #17 TOMM20L (ENSNNAG00000004072) ENSNNAG00000004050 KIAA0586 (ENSNNAG00000003918) #21 DACT1 (ENSNNAG00000003868) #22 ENSNNAG00000003855 DAAM1 (ENSNNAG00000003763) #24 GPR135 (ENSNNAG00000003712) #25 L3HYPDH (ENSNNAG00000003696) JKAMP (ENSNNAG00000003684) ENSNNAG00000003665 #27 ENSNNAG00000003644 #27 LRRC9 (ENSNNAG00000003494) #28 PCNX4 (ENSNNAG00000003473) #29 DHRS7 (ENSNNAG00000003464) #30 PPM1A (ENSNNAG00000003460) #32 SIX6 (ENSNNAG00000003450) #35 ENSNNAG00000003437 SIX1 (ENSNNAG00000003430) #36 SIX4 (ENSNNAG00000010902) #37 Lizard MODERN SPECIES 1071 ENSACAG00000014278 PSMA3 (ENSACAG00000014541) #17 ARID4A (ENSACAG00000014637) #18 ENSACAG00000014683 TIMM9 (ENSACAG00000014715) #20 ENSACAG00000043456 KIAA0586 (ENSACAG00000014719) #21 DACT1 (ENSACAG00000014812) #22 Laterata ANCESTRAL SPECIES 2 ENSGT00390000008727.a.b #14 ENSGT00390000001071 #13 ENSGT00390000005665 #12 ENSGT00390000006191 #11 ENSGT00390000012837 #10 ENSGT00940000155014 #9 ENSGT00390000013544 #8 ENSGT00950000183050.b.a #7 ENSGT00940000158237 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00390000011698.c.b ENSGT00940000165313 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00940000160820 #37 ENSGT00390000002319 ENSGT00940000153304.B Common wall lizard MODERN SPECIES AP5M1 (ENSPMRG00000001923) #11 EXOC5 (ENSPMRG00000001933) #10 TMEM260 (ENSPMRG00000002591) #8 OTX2 (ENSPMRG00000002646) #9 ENSPMRG00000002651 ENSPMRG00000002659 PELI2 (ENSPMRG00000002664) #7 ENSPMRG00000002669 KTN1 (ENSPMRG00000002720) PSMA3 (ENSPMRG00000002821) #17 ARID4A (ENSPMRG00000002888) #18 TOMM20L (ENSPMRG00000003034) ENSPMRG00000003049 KIAA0586 (ENSPMRG00000003066) #21 ENSPMRG00000003093 DACT1 (ENSPMRG00000003098) #22 ENSPMRG00000003109 ENSPMRG00000003116 ENSPMRG00000003127 DAAM1 (ENSPMRG00000003146) #24 GPR135 (ENSPMRG00000003184) #25 L3HYPDH (ENSPMRG00000003189) JKAMP (ENSPMRG00000003195) RTN1 (ENSPMRG00000003216) #27 LRRC9 (ENSPMRG00000003252) #28 PCNX4 (ENSPMRG00000003280) #29 DHRS7 (ENSPMRG00000003294) #30 ENSPMRG00000003304 PPM1A (ENSPMRG00000003315) #32 SIX6 (ENSPMRG00000003321) #35 ENSPMRG00000003324 Argentine black and white tegu MODERN SPECIES 39 SLC35F4 (ENSSMRG00000009661) #14 CCDC198 (ENSSMRG00000009663) #13 NAA30 (ENSSMRG00000009664) #12 AP5M1 (ENSSMRG00000009666) #11 EXOC5 (ENSSMRG00000009667) #10 OTX2 (ENSSMRG00000009678) #9 ENSSMRG00000009679 TMEM260 (ENSSMRG00000009692) #8 PELI2 (ENSSMRG00000009704) #7 KTN1 (ENSSMRG00000009715) PSMA3 (ENSSMRG00000009719) #17 ARID4A (ENSSMRG00000009732) #18 TOMM20L (ENSSMRG00000010186) TIMM9 (ENSSMRG00000010187) #20 KIAA0586 (ENSSMRG00000010188) #21 DACT1 (ENSSMRG00000010195) #22 ENSSMRG00000010198 DAAM1 (ENSSMRG00000010209) #24 L3HYPDH (ENSSMRG00000012383) JKAMP (ENSSMRG00000012384) ENSSMRG00000012390 RTN1 (ENSSMRG00000012392) #27 LRRC9 (ENSSMRG00000012403) #28 PCNX4 (ENSSMRG00000012405) #29 DHRS7 (ENSSMRG00000012407) #30 PPM1A (ENSSMRG00000012411) #32 SIX6 (ENSSMRG00000012417) #35 SIX1 (ENSSMRG00000012422) #36 SIX4 (ENSSMRG00000012424) #37 MNAT1 (ENSSMRG00000012445) TRMT5 (ENSSMRG00000012447) Anura ANCESTRAL SPECIES 22 ENSGT00950000183050.b.a #7 ENSGT00390000013544 #8 ENSGT00940000155014 #9 ENSGT00390000012837 #10 ENSGT00390000006191 #11 ENSGT00390000005665 #12 ENSGT00390000001071 #13 ENSGT00390000008727.a.b #14 ENSGT00940000155293.b ENSGT00390000012816 #15 ENSGT00910000144250 #16 ENSGT00550000074912 #17 ENSGT00940000156159.d #18 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000164048 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000155077 #27 ENSGT00940000158583 #28 ENSGT00940000156899 #29 ENSGT00940000155226 #30 ENSGT00940000154832 #32 ENSGT00940000160091 #35 ENSGT00940000156487 #36 ENSGT00390000010439 #34 ENSGT00940000160820 #37 Frog MODERN SPECIES 8 fbxw9 (ENSXETG00000011995) #10 ap5m1 (ENSXETG00000011994) #11 ENSXETG00000045414 naa30 (ENSXETG00000011990) #12 myh4 (ENSXETG00000011987) CCDC198 (ENSXETG00000039701) #13 slc35f4 (ENSXETG00000011984) #14 kcnk7 (ENSXETG00000011982) armh4 (ENSXETG00000037502) #15 actr10 (ENSXETG00000011980) #16 psma3 (ENSXETG00000011978) #17 arid4a (ENSXETG00000011968) #18 timm9 (ENSXETG00000026270) ENSXETG00000047384 kiaa0586 (ENSXETG00000011966) #21 dact1 (ENSXETG00000011962) #22 XB5727110 [provisional:kcnk16] (ENSXETG00000011960) daam1 (ENSXETG00000017030) #24 gpr135 (ENSXETG00000044195) #25 l3hypdh (ENSXETG00000017026) jkamp (ENSXETG00000017024) ENSXETG00000040283 rtn1 (ENSXETG00000016983) #27 lrrc9 (ENSXETG00000016981) #28 ENSXETG00000034677 pcnx4 (ENSXETG00000016956) #29 dhrs7 (ENSXETG00000016955) #30 ppm1a (ENSXETG00000016952) #32 c14orf39 (ENSXETG00000048810) #34 six6 (ENSXETG00000016945) #35 six1 (ENSXETG00000016943) #36 Leishan spiny toad MODERN SPECIES 4 AP5M1 (ENSLLEG00000026523) #11 ENSLLEG00000026660 ENSLLEG00000026683 NAA30 (ENSLLEG00000026716) #12 ENSLLEG00000026783 SLC35F4 (ENSLLEG00000026849) #14 ENSLLEG00000026950 ENSLLEG00000026975 ENSLLEG00000026996 ENSLLEG00000027007 ENSLLEG00000027024 ENSLLEG00000027039 #18 ENSLLEG00000027099 #21 ENSLLEG00000027172 ENSLLEG00000027208 DACT1 (ENSLLEG00000027220) #22 ENSLLEG00000027249 ENSLLEG00000027272 SEL1L (ENSLLEG00000027346) GTF2A1 (ENSLLEG00000027611) STON2 (ENSLLEG00000027667) ENSLLEG00000027755 ENSLLEG00000027789 ENSLLEG00000027816 NRXN3 (ENSLLEG00000027856) DIO2 (ENSLLEG00000028022) CEP128 (ENSLLEG00000028139) TSHR (ENSLLEG00000028646) ENSLLEG00000028719 ENSLLEG00000028733 ENSLLEG00000028746 Coelacanth MODERN SPECIES 225 KTN1 (ENSLACG00000019025) PELI2 (ENSLACG00000018999) #7 TMEM260 (ENSLACG00000018986) #8 OTX2 (ENSLACG00000018973) #9 EXOC5 (ENSLACG00000018952) #10 AP5M1 (ENSLACG00000018950) #11 NAA30 (ENSLACG00000018945) #12 SLC35F4 (ENSLACG00000018940) #14 ENSLACG00000018922 ACTR10 (ENSLACG00000018903) #16 PSMA3 (ENSLACG00000018893) #17 ARID4A (ENSLACG00000018876) #18 TIMM9 (ENSLACG00000018873) #20 ENSLACG00000018867 #21 IRF2BPL (ENSLACG00000018858) DACT1 (ENSLACG00000018807) #22 ENSLACG00000018782 DAAM1 (ENSLACG00000018743) #24 L3HYPDH (ENSLACG00000018722) JKAMP (ENSLACG00000018717) ENSLACG00000022209 RTN1 (ENSLACG00000018687) #27 LRRC9 (ENSLACG00000018652) #28 PCNX4 (ENSLACG00000018637) #29 DHRS7 (ENSLACG00000018627) #30 PPM1A (ENSLACG00000018611) #32 C14orf39 (ENSLACG00000022366) #34 SIX6 (ENSLACG00000018574) #35 SIX1 (ENSLACG00000018541) #36 SIX4 (ENSLACG00000018526) #37 MNAT1 (ENSLACG00000018476) Actinopterygii ANCESTRAL SPECIES 59 ENSGT00940000158135 ENSGT00940000166431 ENSGT00390000012799 ENSGT00550000074824 ENSGT00390000006916.d ENSGT00940000161442 ENSGT00940000161150 ENSGT00950000185018 ENSGT00940000162043 ENSGT00390000017800 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000158296 ENSGT00390000017718 ENSGT00950000182767.b.a.a ENSGT00390000013814 ENSGT00730000111160 Neopterygii ANCESTRAL SPECIES 43 ENSGT00940000158135 ENSGT00940000166431 ENSGT00390000012799 ENSGT00550000074824 ENSGT00390000006916.d ENSGT00940000161442 ENSGT00940000161150 ENSGT00950000185018 ENSGT00940000162043 ENSGT00390000017800 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000156452 #24 ENSGT00950000182998.A #25 ENSGT00390000002032 ENSGT00390000018097 ENSGT00940000167646 ENSGT00940000158296 ENSGT00390000017718 ENSGT00950000182767.b.a.a ENSGT00390000013814 ENSGT00730000111160 Osteoglossocephalai ANCESTRAL SPECIES 13 ENSGT00550000074824 ENSGT00940000166955 ENSGT00390000006916.d ENSGT01030000234987 ENSGT00940000161442 ENSGT00940000161150 ENSGT00950000185018 ENSGT00940000162043 ENSGT00390000017800 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.b ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00390000011854 ENSGT00940000159561 ENSGT00900000141196 ENSGT00940000164564.f.a ENSGT00940000160664 ENSGT00940000156269 ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00390000013762.b.b ENSGT00390000007594 Osteoglossiformes ANCESTRAL SPECIES 25 ENSGT00940000158135 ENSGT00390000012799 ENSGT00550000074824 ENSGT00940000166955 ENSGT00390000006916.d ENSGT01030000234987 ENSGT00940000161442 ENSGT00940000161150 ENSGT00940000162043 ENSGT00390000017800 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.b ENSGT00530000064222.b ENSGT00390000011854 ENSGT00940000159561 ENSGT00900000141196 ENSGT00940000164564.f.a ENSGT01030000234534.A.d ENSGT00940000156269 ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013762.b.b ENSGT00390000007594 ENSGT00940000164602 ENSGT00940000166410 P. kingsleyae MODERN SPECIES 352 SSTR1 (ENSPKIG00000015296) ENSPKIG00000015307 mipol1 (ENSPKIG00000015332) psma3 (ENSPKIG00000015367) #17 arid4a (ENSPKIG00000015415) #18 timm9 (ENSPKIG00000015476) #20 si:ch211-185a18.2 (ENSPKIG00000015498) #21 irf2bpl (ENSPKIG00000015527) dact1 (ENSPKIG00000015541) #22 Asian bonytongue MODERN SPECIES 6 eml1 (ENSSFOG00015018928) ENSSFOG00015019022 ENSSFOG00015019043 disp2 (ENSSFOG00015019033) rpusd2 (ENSSFOG00015019057) pcmtl (ENSSFOG00015019062) ccdc32 (ENSSFOG00015030812) otol1a (ENSSFOG00015019091) foxa1 (ENSSFOG00015019128) mipol1 (ENSSFOG00015019142) psma3 (ENSSFOG00015019194) #17 arid4a (ENSSFOG00015019230) #18 timm9 (ENSSFOG00015019283) #20 irf2bpl (ENSSFOG00015019340) si:ch211-185a18.2 (ENSSFOG00015019295) #21 dact1 (ENSSFOG00015019391) #22 ENSSFOG00015019398 ENSSFOG00015030676 fbxo34 (ENSSFOG00015019415) atg14 (ENSSFOG00015019435) tbpl2 (ENSSFOG00015032622) jmjd7 (ENSSFOG00015019698) ENSSFOG00015031269 ENSSFOG00015025292 tyro3 (ENSSFOG00015019936) lrrc57 (ENSSFOG00015026376) haus2 (ENSSFOG00015029433) RYR3 (ENSSFOG00015017847) ENSSFOG00015017815 RPAP1 (ENSSFOG00015017757) ENSSFOG00015024927 Clupeocephala ANCESTRAL SPECIES 14 ENSGT00940000166602.A ENSGT00940000166955 ENSGT00390000006916.d.b ENSGT01030000234987 ENSGT00940000161442 ENSGT00940000161150 ENSGT00950000185018 ENSGT00940000162043 ENSGT00390000017800 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00390000011854 ENSGT00940000159561 ENSGT00900000141196 ENSGT00940000164564.f.a ENSGT01030000234534.A.d ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00390000013762.b.b ENSGT00390000007594 ENSGT00940000164602 Otomorpha ANCESTRAL SPECIES 7 ENSGT00390000006916.d.a.b ENSGT00940000166955 ENSGT00390000006916.d.b ENSGT01030000234987 ENSGT00940000161442 ENSGT00940000161150 ENSGT00950000185018 ENSGT00940000162043 ENSGT00390000017800 ENSGT00960000186989 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00390000011854 ENSGT00940000159561 ENSGT00900000141196 ENSGT00940000164564.f.a ENSGT01030000234534.A.d ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00390000013762.b.b ENSGT00390000007594 ENSGT00940000164602 Clupeiformes ANCESTRAL SPECIES 25 ENSGT00940000158135 ENSGT00390000012799 ENSGT00550000074824 ENSGT00940000166955 ENSGT00390000006916.d.b ENSGT01030000234987 ENSGT00940000161442 ENSGT00940000161150 ENSGT00950000185018 ENSGT00940000162043 ENSGT00390000017800 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00390000011854 ENSGT00940000159561 ENSGT00900000141196 ENSGT00940000164564.f.a ENSGT01030000234534.A.d ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000007594 ENSGT00940000164602 ENSGT00940000166410 ENSGT00940000158100 ENSGT00390000003967.b.c Denticle herring MODERN SPECIES BAZ1A (ENSDCDG00000001944) zgc:109986 (ENSDCDG00000001926) srp54 (ENSDCDG00000001899) ENSDCDG00000001894 sec23a (ENSDCDG00000001879) clec14a (ENSDCDG00000001866) SSTR1 (ENSDCDG00000001864) ENSDCDG00000001859 ENSDCDG00000001843 foxa1 (ENSDCDG00000001840) mipol1 (ENSDCDG00000001835) psma3 (ENSDCDG00000001830) #17 arid4a (ENSDCDG00000001477) #18 timm9 (ENSDCDG00000001437) #20 si:ch211-185a18.2 (ENSDCDG00000001436) #21 dact1 (ENSDCDG00000001435) #22 ENSDCDG00000001434 fbxo34 (ENSDCDG00000001433) atg14 (ENSDCDG00000001429) tbpl2 (ENSDCDG00000001426) jmjd7 (ENSDCDG00000001424) ENSDCDG00000001418 ENSDCDG00000001409 tyro3 (ENSDCDG00000001403) haus2 (ENSDCDG00000001398) ENSDCDG00000001395 acp7 (ENSDCDG00000001394) ENSDCDG00000001392 THBS1 (ENSDCDG00000001391) tyro3 (ENSDCDG00000001367) lrrc57 (ENSDCDG00000001355) Atlantic herring MODERN SPECIES 5 ENSCHAG00000012873 cfl2 (ENSCHAG00000013119) sec23a (ENSCHAG00000013137) ENSCHAG00000013186 ENSCHAG00000013201 ENSCHAG00000013228 clec14a (ENSCHAG00000013237) SSTR1 (ENSCHAG00000013244) ENSCHAG00000013255 foxa1 (ENSCHAG00000013294) mipol1 (ENSCHAG00000013310) psma3 (ENSCHAG00000013320) #17 arid4a (ENSCHAG00000013560) #18 timm9 (ENSCHAG00000015077) #20 si:ch211-185a18.2 (ENSCHAG00000015118) #21 dact1 (ENSCHAG00000015231) #22 lgals3b (ENSCHAG00000015244) fbxo34 (ENSCHAG00000015257) atg14 (ENSCHAG00000015278) tbpl2 (ENSCHAG00000015292) jmjd7 (ENSCHAG00000015303) ENSCHAG00000015376 ENSCHAG00000015381 ENSCHAG00000015388 tyro3 (ENSCHAG00000015429) lrrc57 (ENSCHAG00000016895) ENSCHAG00000016903 ENSCHAG00000016934 RPAP1 (ENSCHAG00000016968) ltk (ENSCHAG00000017293) itpka (ENSCHAG00000018086) Otophysi ANCESTRAL SPECIES 21 ENSGT00390000018900 ENSGT00940000178689 ENSGT00390000005861.b ENSGT00950000183142.a.b.a.b ENSGT00940000156766 ENSGT00940000156992.f ENSGT00940000165019 ENSGT00940000160590 ENSGT00940000156546.`b.b ENSGT00390000017953.B ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00390000011854 ENSGT00940000159561 ENSGT00900000141196 ENSGT00940000164564.f.a ENSGT01030000234534.A.d ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00390000017800 ENSGT00940000162043 ENSGT00940000161150 ENSGT00940000161442 ENSGT01030000234987 ENSGT00940000166602.A Characiphysae ANCESTRAL SPECIES 4 ENSGT00390000011642.f ENSGT00940000155913.c ENSGT00940000156674 ENSGT00940000156509 ENSGT00390000010056.a ENSGT01030000234517.H.b.l ENSGT00940000156491.a.c ENSGT00390000004700.b ENSGT00940000171352 ENSGT00390000017953.B ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00390000011854 ENSGT00940000159561 ENSGT00900000141196 ENSGT00940000164564.f.a ENSGT01030000234534.A.d ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00390000017800 ENSGT00940000162043 ENSGT00940000161150 ENSGT00940000161442 ENSGT01030000234987 ENSGT00940000166602.A Channel catfish MODERN SPECIES 28 myct1 (ENSIPUG00000002522) tulp4 (ENSIPUG00000002465) slc18b1 (ENSIPUG00000002449) ahi1 (ENSIPUG00000002400) lft2 (ENSIPUG00000002384) cdc42bpa (ENSIPUG00000002186) fzd3b (ENSIPUG00000002151) KRTCAP3 (ENSIPUG00000002138) ENSIPUG00000002098 ENSIPUG00000002087 ENSIPUG00000002072 psma3 (ENSIPUG00000002025) #17 arid4a (ENSIPUG00000001971) #18 timm9 (ENSIPUG00000001961) #20 si:ch211-185a18.2 (ENSIPUG00000001880) #21 dact1 (ENSIPUG00000001860) #22 lgals3 (ENSIPUG00000001850) fbxo34 (ENSIPUG00000001840) atg14 (ENSIPUG00000001820) tbpl2 (ENSIPUG00000001811) jmjd7 (ENSIPUG00000001797) ENSIPUG00000001765 mgaa (ENSIPUG00000001641) tyro3 (ENSIPUG00000001585) mipol1 (ENSIPUG00000001554) foxa1 (ENSIPUG00000001537) sstr1 (ENSIPUG00000001536) CLEC14A (ENSIPUG00000001526) ENSIPUG00000001512 sec23a (ENSIPUG00000001462) srp54 (ENSIPUG00000001420) Characiphysae_b ANCESTRAL SPECIES 13 ENSGT00390000011642.f ENSGT00940000155913.c ENSGT00940000156674 ENSGT00940000156509 ENSGT00390000010056.a ENSGT01030000234517.H.b.l ENSGT00940000156491.a.c ENSGT00390000004700.b ENSGT00940000171352 ENSGT00390000017953.B ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00390000011854 ENSGT00940000159561 ENSGT00900000141196 ENSGT00940000164564.f.a ENSGT01030000234534.A.d ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00390000017800 ENSGT00940000162043 ENSGT00940000161150 ENSGT00940000161442 ENSGT01030000234987 ENSGT00940000166602.A Characoidei ANCESTRAL SPECIES 57 ENSGT00390000011642.f ENSGT00940000155913.c ENSGT00940000156674 ENSGT00940000156509 ENSGT00390000010056.a ENSGT01030000234517.H.b.l ENSGT00940000156491.a.c ENSGT00390000004700.b ENSGT00940000171352 ENSGT00390000017953.B ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00390000011854 ENSGT00940000159561 ENSGT00900000141196 ENSGT00940000164564.f.a ENSGT01030000234534.A.d ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00390000017800 ENSGT00940000162043 ENSGT00940000161150 ENSGT00940000161442 ENSGT01030000234987 ENSGT00940000166602.A Red-bellied piranha MODERN SPECIES 64 ENSPNAG00000007966 TULP4 (ENSPNAG00000007981) slc18b1 (ENSPNAG00000007997) ahi1 (ENSPNAG00000008019) lft2 (ENSPNAG00000000608) CDC42BPA (ENSPNAG00000008060) fzd3b (ENSPNAG00000000637) KRTCAP3 (ENSPNAG00000008078) ENSPNAG00000000660 ENSPNAG00000000670 psma3 (ENSPNAG00000000682) #17 arid4a (ENSPNAG00000000710) #18 timm9 (ENSPNAG00000000720) #20 irf2bpl (ENSPNAG00000000727) si:ch211-185a18.2 (ENSPNAG00000008234) #21 dact1 (ENSPNAG00000008247) #22 lgals3b (ENSPNAG00000000827) fbxo34 (ENSPNAG00000008261) atg14 (ENSPNAG00000000848) tbpl2 (ENSPNAG00000008275) jmjd7 (ENSPNAG00000008280) ENSPNAG00000006638 ENSPNAG00000000884 mgaa (ENSPNAG00000000905) tyro3 (ENSPNAG00000008345) mipol1 (ENSPNAG00000000920) foxa1 (ENSPNAG00000008357) clec14a (ENSPNAG00000000929) SSTR1 (ENSPNAG00000008364) TTC6 (ENSPNAG00000001025) ENSPNAG00000001033 Mexicana tetra MODERN SPECIES 24 ENSAMXG00000000501 TULP4 (ENSAMXG00000000495) slc18b1 (ENSAMXG00000000489) ahi1 (ENSAMXG00000000479) lft2 (ENSAMXG00000000468) CDC42BPA (ENSAMXG00000000461) fzd3b (ENSAMXG00000000459) ENSAMXG00000000454 ENSAMXG00000000443 ENSAMXG00000040049 psma3 (ENSAMXG00000000426) #17 timm9 (ENSAMXG00000000418) #20 arid4a (ENSAMXG00000000379) #18 irf2bpl (ENSAMXG00000035489) si:ch211-185a18.2 (ENSAMXG00000000355) #21 dact1 (ENSAMXG00000029795) #22 lgals3b (ENSAMXG00000042316) fbxo34 (ENSAMXG00000035812) atg14 (ENSAMXG00000000329) tbpl2 (ENSAMXG00000000325) jmjd7 (ENSAMXG00000036829) ENSAMXG00000038074 ENSAMXG00000000319 ENSAMXG00000034478 tyro3 (ENSAMXG00000000312) mipol1 (ENSAMXG00000034555) foxa1 (ENSAMXG00000040223) TTC6 (ENSAMXG00000000300) SSTR1 (ENSAMXG00000025379) clec14a (ENSAMXG00000029965) ENSAMXG00000029727 Electric eel MODERN SPECIES 198 dact1 (ENSEEEG00000004288) #22 ENSEEEG00000004289 fbxo34 (ENSEEEG00000004290) atg14 (ENSEEEG00000004291) tbpl2 (ENSEEEG00000004293) jmjd7 (ENSEEEG00000004297) ENSEEEG00000004301 ENSEEEG00000004303 mgaa (ENSEEEG00000004309) tyro3 (ENSEEEG00000004312) mipol1 (ENSEEEG00000004317) foxa1 (ENSEEEG00000004320) ENSEEEG00000004324 SSTR1 (ENSEEEG00000004331) clec14a (ENSEEEG00000004332) sec23a (ENSEEEG00000004336) Cyprinoidei ANCESTRAL SPECIES 24 ENSGT00950000182843.a.a.a.b.a.a.b ENSGT00390000018900 ENSGT00390000005861.b ENSGT00950000183142.a.b.a.b ENSGT00940000156766 ENSGT00940000156992.f ENSGT00940000165019 ENSGT00940000160590 ENSGT00940000156546.`b.b ENSGT00390000017953.B ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00390000011854 ENSGT00940000159561 ENSGT00900000141196 ENSGT00940000164564.f.a ENSGT01030000234534.A.d ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00390000017800 ENSGT00940000162043 ENSGT00940000161150 ENSGT00940000161442 ENSGT01030000234987 ENSGT00940000166602.A Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 42 ENSGT00940000156546.`b.b.d ENSGT00390000017953.B.b ENSGT00550000074912.fb.b #17 ENSGT00940000156159.i.b #18 ENSGT00940000160102.h #20 ENSGT00940000162596 ENSGT00940000167557.a ENSGT00940000156546.`b.b.c ENSGT00390000017953.B.a ENSGT00550000074912.gb #17 ENSGT00960000186989 ENSGT00550000074912.fb.a #17 ENSGT00940000156159.i.a #18 ENSGT00940000160102.g #20 ENSGT00390000012397.c #21 ENSGT00950000183181.B.a.a #22 ENSGT00940000165169.b.a.i ENSGT00530000064222.b.h ENSGT00390000011854.i ENSGT00940000159561.o ENSGT00900000141196.e ENSGT00940000164564.f.a.m ENSGT01030000234534.A.d.a ENSGT00940000156269.a.a.b ENSGT00940000155879.i ENSGT00390000017800.h ENSGT00940000162043.b ENSGT00940000161150 ENSGT00940000161442.b ENSGT00390000006916.d.a.a ENSGT01030000234987.a Goldfish MODERN SPECIES 8 SCCPDH (ENSCARG00000005438) AHCTF1 (ENSCARG00000006120) snap25b (ENSCARG00000007305) ANKEF1 (ENSCARG00000007323) khk (ENSCARG00000007352) tfb2m (ENSCARG00000007437) smyd3 (ENSCARG00000007465) KIF26B (ENSCARG00000007505) efcab2 (ENSCARG00000007617) HNRNPU (ENSCARG00000007662) ENSCARG00000009064 psma3 (ENSCARG00000009077) #17 arid4a (ENSCARG00000009115) #18 timm9 (ENSCARG00000029674) #20 si:ch211-185a18.2 (ENSCARG00000029720) #21 dact1 (ENSCARG00000029790) #22 lgals3b (ENSCARG00000029803) fbxo34 (ENSCARG00000029821) atg14 (ENSCARG00000029842) tbpl2 (ENSCARG00000029870) jmjd7 (ENSCARG00000029886) ENSCARG00000030075 ENSCARG00000032988 mgaa (ENSCARG00000033014) tyro3 (ENSCARG00000033161) mipol1 (ENSCARG00000035445) foxa1 (ENSCARG00000035464) ENSCARG00000035470 clec14a (ENSCARG00000035522) SSTR1 (ENSCARG00000035529) sec23a (ENSCARG00000035551) Cyprininae_a ANCESTRAL SPECIES 108 ENSGT00950000182843.a.a.a.b.a.a.b.a ENSGT00390000018900.p ENSGT00390000004799.m.b ENSGT00390000005861.b.a ENSGT00950000183142.a.b.a.b.a ENSGT00940000156766.b ENSGT00940000156992.f.b ENSGT00940000167557.a ENSGT00940000156546.`b.b.c ENSGT00390000017953.B.a ENSGT00960000186989 ENSGT00550000074912.fb.a #17 ENSGT00940000156159.i.a #18 ENSGT00940000160102.g #20 ENSGT00390000012397.c #21 ENSGT00950000183181.B.a.a #22 ENSGT00940000165169.b.a.i ENSGT00530000064222.b.h ENSGT00390000011854.i ENSGT00940000159561.o ENSGT00900000141196.e ENSGT00940000164564.f.a.m ENSGT01030000234534.A.d.a ENSGT00940000156269.a.a.b ENSGT00940000155879.i ENSGT00390000017800.h ENSGT00940000162043.b ENSGT00940000161150 ENSGT00940000161442.b ENSGT01030000234987.a ENSGT00390000006916.d.a.b.c Common carp reference MODERN SPECIES 30 ENSCCRG00000044373 snap25b (ENSCCRG00000047191) AHCTF1 (ENSCCRG00000044305) ENSCCRG00000044285 CNST (ENSCCRG00000044276) tfb2m (ENSCCRG00000078417) smyd3 (ENSCCRG00000025134) ENSCCRG00000074040 ENSCCRG00000049252 efcab2 (ENSCCRG00000036667) HNRNPU (ENSCCRG00000036677) ENSCCRG00000065468 psma3 (ENSCCRG00000080020) #17 arid4a (ENSCCRG00000036734) #18 si:ch211-185a18.2 (ENSCCRG00000007673) #21 dact1 (ENSCCRG00000059032) #22 lgals3b (ENSCCRG00000007665) fbxo34 (ENSCCRG00000030945) atg14 (ENSCCRG00000007656) jmjd7 (ENSCCRG00000007639) ENSCCRG00000003163 ENSCCRG00000030069 mgaa (ENSCCRG00000030063) tyro3 (ENSCCRG00000013786) mipol1 (ENSCCRG00000082052) foxa1 (ENSCCRG00000061117) SSTR1 (ENSCCRG00000067950) clec14a (ENSCCRG00000013828) sec23a (ENSCCRG00000055148) ENSCCRG00000057404 srp54 (ENSCCRG00000022851) Golden-line barbel MODERN SPECIES 83 khk (ENSSGRG00000049885) snap25b (ENSSGRG00000049918) ENSSGRG00000049880 ENSSGRG00000049871 tfb2m (ENSSGRG00000049868) smyd3 (ENSSGRG00000049867) KIF26B (ENSSGRG00000049866) ENSSGRG00000049865 HNRNPU (ENSSGRG00000049864) ENSSGRG00000049861 ENSSGRG00000049860 psma3 (ENSSGRG00000049859) #17 arid4a (ENSSGRG00000049661) #18 timm9 (ENSSGRG00000049660) #20 si:ch211-185a18.2 (ENSSGRG00000049659) #21 dact1 (ENSSGRG00000049658) #22 lgals3b (ENSSGRG00000049657) fbxo34 (ENSSGRG00000049656) atg14 (ENSSGRG00000049655) tbpl2 (ENSSGRG00000049654) jmjd7 (ENSSGRG00000049645) ENSSGRG00000049428 ENSSGRG00000049416 ENSSGRG00000049415 mgaa (ENSSGRG00000049413) tyro3 (ENSSGRG00000049408) mipol1 (ENSSGRG00000049400) foxa1 (ENSSGRG00000049395) ENSSGRG00000049393 SSTR1 (ENSSGRG00000049391) clec14a (ENSSGRG00000049389) Cyprininae ANCESTRAL SPECIES 726 ENSGT00950000183519 ENSGT00390000012397.d #21 ENSGT00950000183181.B.a.b #22 ENSGT00940000165169.b.a.j ENSGT00530000064222.b.g ENSGT00390000011854.j ENSGT00940000159561.p ENSGT00900000141196.f ENSGT00940000164564.f.a.n ENSGT00940000156269.a.a.a ENSGT00940000155879.j Goldfish DUPLICATION Goldfish DUPLICATION Goldfish MODERN SPECIES 36 ENSCARG00000069897 atg14 (ENSCARG00000069911) fbxo34 (ENSCARG00000069913) lgals3b (ENSCARG00000069917) dact1 (ENSCARG00000069922) #22 ENSCARG00000069924 efcab2 (ENSCARG00000069925) HNRNPU (ENSCARG00000053485) ENSCARG00000054171 ENSCARG00000054175 psma3 (ENSCARG00000054212) #17 arid4a (ENSCARG00000054334) #18 timm9 (ENSCARG00000054459) #20 ENSCARG00000054488 ENSCARG00000054496 dact1 (ENSCARG00000054507) #22 SCCPDH (ENSCARG00000054531) ENSCARG00000054644 ENSCARG00000054665 il17a/f1 (ENSCARG00000054706) stmn4l (ENSCARG00000054717) gpn1 (ENSCARG00000054743) ENSCARG00000054796 khk (ENSCARG00000054837) snap25b (ENSCARG00000054862) AHCTF1 (ENSCARG00000054931) ENSCARG00000055452 SCCPDH (ENSCARG00000055481) ENSCARG00000055521 tfb2m (ENSCARG00000055555) smyd3 (ENSCARG00000055602) Goldfish MODERN SPECIES 36 il17a/f1 (ENSCARG00000054706) ENSCARG00000054665 ENSCARG00000054644 SCCPDH (ENSCARG00000054531) dact1 (ENSCARG00000054507) #22 ENSCARG00000054496 ENSCARG00000054488 timm9 (ENSCARG00000054459) #20 arid4a (ENSCARG00000054334) #18 psma3 (ENSCARG00000054212) #17 ENSCARG00000054175 ENSCARG00000054171 HNRNPU (ENSCARG00000053485) efcab2 (ENSCARG00000069925) ENSCARG00000069924 dact1 (ENSCARG00000069922) #22 lgals3b (ENSCARG00000069917) fbxo34 (ENSCARG00000069913) atg14 (ENSCARG00000069911) ENSCARG00000069897 ENSCARG00000069858 mgaa (ENSCARG00000069844) tyro3 (ENSCARG00000069752) mipol1 (ENSCARG00000069688) foxa1 (ENSCARG00000069685) SSTR1 (ENSCARG00000069679) clec14a (ENSCARG00000069678) ENSCARG00000069675 znf395a (ENSCARG00000069673) ENSCARG00000069672 KIF13B (ENSCARG00000069275) Goldfish MODERN SPECIES 735 dact1 (ENSCARG00000049324) #22 lgals3b (ENSCARG00000049284) Cyprininae_a ANCESTRAL SPECIES 24 ENSGT00940000163104 ENSGT00390000004799.m.a ENSGT00390000005861.b.b ENSGT00950000183142.a.b.a.b.b ENSGT00940000156766.a ENSGT00940000156992.f.a ENSGT00940000165019 ENSGT00940000160590 ENSGT00940000156546.`b.b.d ENSGT00390000017953.B.b ENSGT00550000074912.gb #17 ENSGT00940000156159.i.b #18 ENSGT00940000165313 ENSGT00950000183519 ENSGT00390000012397.d #21 ENSGT00950000183181.B.a.b #22 ENSGT00940000165169.b.a.j ENSGT00530000064222.b.g ENSGT00390000011854.j ENSGT00940000159561.p ENSGT00900000141196.f ENSGT00940000164564.f.a.n ENSGT00940000156269.a.a.a ENSGT00940000155879.j ENSGT00390000017800.g ENSGT00940000161442.a ENSGT01030000234987.b ENSGT00390000006916.d.a.b.d ENSGT00550000074824.q ENSGT00390000012799.b ENSGT00940000166431.a Common carp reference MODERN SPECIES 4 khk (ENSCCRG00000074147) ENSCCRG00000047176 snap25b (ENSCCRG00000074511) AHCTF1 (ENSCCRG00000048977) ENSCCRG00000049777 ENSCCRG00000049778 ENSCCRG00000049781 tfb2m (ENSCCRG00000044274) smyd3 (ENSCCRG00000021325) ENSCCRG00000049239 HNRNPU (ENSCCRG00000049268) ENSCCRG00000069324 psma3 (ENSCCRG00000049361) #17 arid4a (ENSCCRG00000003569) #18 ENSCCRG00000068629 dact1 (ENSCCRG00000001724) #22 lgals3b (ENSCCRG00000054293) fbxo34 (ENSCCRG00000007660) atg14 (ENSCCRG00000001580) tbpl2 (ENSCCRG00000063315) jmjd7 (ENSCCRG00000044105) ENSCCRG00000043814 mgaa (ENSCCRG00000043749) tyro3 (ENSCCRG00000043724) foxa1 (ENSCCRG00000013804) mipol1 (ENSCCRG00000072458) clec14a (ENSCCRG00000013814) SSTR1 (ENSCCRG00000013812) ENSCCRG00000074542 ENSCCRG00000022738 srp54 (ENSCCRG00000022883) Golden-line barbel MODERN SPECIES 117 khk (ENSSGRG00000032144) snap25b (ENSSGRG00000032143) AHCTF1 (ENSSGRG00000032084) sccpdha.1 (ENSSGRG00000032004) tfb2m (ENSSGRG00000032003) smyd3 (ENSSGRG00000032002) KIF26B (ENSSGRG00000031999) ENSSGRG00000031998 EFCAB2 (ENSSGRG00000031997) HNRNPU (ENSSGRG00000031994) ENSSGRG00000031993 psma3 (ENSSGRG00000031990) #17 arid4a (ENSSGRG00000031985) #18 ENSSGRG00000031982 si:ch211-185a18.2 (ENSSGRG00000031979) #21 dact1 (ENSSGRG00000031976) #22 lgals3b (ENSSGRG00000031973) fbxo34 (ENSSGRG00000031969) atg14 (ENSSGRG00000031967) tbpl2 (ENSSGRG00000031965) ENSSGRG00000031960 ENSSGRG00000031958 mgaa (ENSSGRG00000031957) tyro3 (ENSSGRG00000031945) vim (ENSSGRG00000031944) mipol1 (ENSSGRG00000031943) SSTR1 (ENSSGRG00000031939) clec14a (ENSSGRG00000031938) ENSSGRG00000031719 srp54 (ENSSGRG00000031646) zgc:109986 (ENSSGRG00000031645) Zebrafish MODERN SPECIES 8 sccpdha.2 (ENSDARG00000075053) ENSDARG00000086283 tfb2m (ENSDARG00000074756) ENSDARG00000114403 smyd3 (ENSDARG00000058050) KIF26B (ENSDARG00000013343) efcab2 (ENSDARG00000074323) HNRNPU (ENSDARG00000015206) ENSDARG00000062785 psma3 (ENSDARG00000086618) #17 arid4a (ENSDARG00000043873) #18 timm9 (ENSDARG00000043865) #20 irf2bpl (ENSDARG00000004297) ENSDARG00000096963 si:ch211-185a18.2 (ENSDARG00000097772) #21 dact1 (ENSDARG00000101635) #22 lgals3b (ENSDARG00000044001) ENSDARG00000077035 fbxo34 (ENSDARG00000071259) atg14 (ENSDARG00000002670) tbpl2 (ENSDARG00000097302) jmjd7 (ENSDARG00000035546) ENSDARG00000103746 mgaa (ENSDARG00000078784) tyro3 (ENSDARG00000005356) mipol1 (ENSDARG00000104845) foxa1 (ENSDARG00000102138) TTC6 (ENSDARG00000104125) SSTR1 (ENSDARG00000104922) clec14a (ENSDARG00000103533) ENSDARG00000104695 Euteleosteomorpha ANCESTRAL SPECIES 110 ENSGT00390000006916.d.a.b ENSGT00940000166602.A ENSGT00940000166955 ENSGT00390000006916.d.b ENSGT01030000234987 ENSGT00940000161442 ENSGT00940000161150 ENSGT00940000162043 ENSGT00390000017800 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00390000011854 ENSGT00940000159561 ENSGT00900000141196 ENSGT00940000164564.f.a ENSGT01030000234534.A.d ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 Protacanthopterygii ANCESTRAL SPECIES 22 ENSGT00390000012799 ENSGT00550000074824 ENSGT00940000166955 ENSGT00390000006916.d.b ENSGT01030000234987 ENSGT00940000161442 ENSGT00940000161150 ENSGT00940000162043 ENSGT00390000017800 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102.f #20 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.b.d ENSGT00530000064222.b ENSGT00390000011854 ENSGT00940000159561 ENSGT00900000141196 ENSGT00940000164564.f.a ENSGT01030000234534.A.d ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00940000162083 ENSGT00940000159071.y.a ENSGT00940000156384.o ENSGT00940000153577.B Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 125 ENSGT00940000158051.e ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332.cb ENSGT00940000154940.k.a ENSGT00950000183000.c.b.j ENSGT00940000158135.d ENSGT00390000012799.i ENSGT00550000074824.s ENSGT00390000006916.d.b.b ENSGT01030000234987.c ENSGT00940000161442.d ENSGT00940000162043.d ENSGT00550000074912.hb #17 ENSGT00940000156159.l #18 ENSGT00950000183181.B.a.c #22 ENSGT00530000064222.b.j ENSGT00390000011854.b ENSGT00940000159561.k ENSGT00940000164564.f.a.d ENSGT00940000156269.a.a.d ENSGT00940000155879.l ENSGT00940000157393.m ENSGT00940000162083.f ENSGT00940000159071.y.a.u.a.b ENSGT00940000153577.B.l ENSGT00940000161060.f ENSGT00940000161060.e.b ENSGT00940000155554.f ENSGT00390000003303.d ENSGT00940000158937.a.d Salmoninae_a ANCESTRAL SPECIES 8 ENSGT00390000002766.b.b ENSGT00390000001332.cb ENSGT00940000154940.k.a ENSGT00950000183000.c.b.j ENSGT00940000158135.d ENSGT00390000012799.i ENSGT00550000074824.s ENSGT00390000006916.d.b.b ENSGT01030000234987.c ENSGT00940000161442.d ENSGT00940000162043.d ENSGT00550000074912.hb #17 ENSGT00940000156159.l #18 ENSGT00940000160102.e #20 ENSGT00940000162596 ENSGT00950000183181.B.a.c #22 ENSGT00940000165169.b.b.d.b ENSGT00530000064222.b.j ENSGT00390000011854.b ENSGT00940000159561.k ENSGT00940000164564.f.a.d ENSGT00940000156269.a.a.d ENSGT00940000155879.l ENSGT00940000157393.m ENSGT00940000162083.f ENSGT00940000159071.y.a.u.a.b ENSGT00940000156384.o.b.a ENSGT00940000153577.B.l ENSGT00940000161060.e.b ENSGT00990000211133 ENSGT00940000155554.f Salmo ANCESTRAL SPECIES 11 ENSGT00940000158745 ENSGT00390000002766.b.b ENSGT00390000001332.cb ENSGT00940000154940.k.a ENSGT00950000183000.c.b.j ENSGT00940000158135.d ENSGT00390000012799.i ENSGT00550000074824.s ENSGT00390000006916.d.b.b ENSGT01030000234987.c ENSGT00940000161442.d ENSGT00940000162043.d ENSGT00550000074912.hb #17 ENSGT00940000156159.l #18 ENSGT00940000160102.e #20 ENSGT00950000183181.B.a.c #22 ENSGT00940000165169.b.b.d.b ENSGT00530000064222.b.j ENSGT00390000011854.b ENSGT00940000159561.k ENSGT00940000164564.f.a.d ENSGT00940000156269.a.a.d ENSGT00940000155879.l ENSGT00940000157393.m ENSGT00940000164056.h ENSGT00940000159071.y.a.u.a.b ENSGT00940000156384.o.b.a ENSGT00940000153577.B.l ENSGT00940000161060.f ENSGT00940000161060.e.b ENSGT00990000211133 Atlantic salmon MODERN SPECIES 28 AKAP6 (ENSSSAG00000069193) NPAS3 (ENSSSAG00000069230) EGLN3 (ENSSSAG00000091105) eapp (ENSSSAG00000070043) snx6 (ENSSSAG00000070077) cfl2 (ENSSSAG00000070963) BAZ1A (ENSSSAG00000070981) srp54 (ENSSSAG00000071013) sec23a (ENSSSAG00000071046) clec14a (ENSSSAG00000071151) SSTR1 (ENSSSAG00000101610) foxa1 (ENSSSAG00000071160) ENSSSAG00000117079 PSMA3 (ENSSSAG00000071166) #17 arid4a (ENSSSAG00000071199) #18 DACT1 (ENSSSAG00000071445) #22 ENSSSAG00000071455 fbxo34 (ENSSSAG00000103562) atg14 (ENSSSAG00000114319) tbpl2 (ENSSSAG00000071486) ENSSSAG00000071598 ENSSSAG00000071609 tyro3 (ENSSSAG00000071619) hhipl1 (ENSSSAG00000071651) ccdc85ca (ENSSSAG00000117958) setd3 (ENSSSAG00000071960) ENSSSAG00000119928 BCL11B (ENSSSAG00000071984) ENSSSAG00000064994 ENSSSAG00000106358 vrk1 (ENSSSAG00000072004) River trout MODERN SPECIES 17 snx6 (ENSSTUG00000003540) ENSSTUG00000003482 ENSSTUG00000003479 cfl2 (ENSSTUG00000003466) BAZ1A (ENSSTUG00000031073) zgc:109986 (ENSSTUG00000031062) srp54 (ENSSTUG00000031042) sec23a (ENSSTUG00000030966) clec14a (ENSSTUG00000030946) SSTR1 (ENSSTUG00000030944) foxa1 (ENSSTUG00000030937) psma3 (ENSSTUG00000030918) #17 arid4a (ENSSTUG00000030518) #18 timm9 (ENSSTUG00000030497) #20 ENSSTUG00000030484 dact1 (ENSSTUG00000030477) #22 ENSSTUG00000030473 ENSSTUG00000030460 fbxo34 (ENSSTUG00000030456) atg14 (ENSSTUG00000030449) tbpl2 (ENSSTUG00000030446) ENSSTUG00000030268 ENSSTUG00000030252 tyro3 (ENSSTUG00000029921) lrrc57 (ENSSTUG00000029893) hhipl1 (ENSSTUG00000029464) ccdc85ca (ENSSTUG00000029447) CCNK (ENSSTUG00000029423) setd3 (ENSSTUG00000029296) bcl11ba (ENSSTUG00000029272) ENSSTUG00000029254 Oncorhynchus ANCESTRAL SPECIES 35 ENSGT00390000002766.b.b ENSGT00390000001332.cb ENSGT00940000154940.k.a ENSGT00950000183000.c.b.j ENSGT00940000158135.d ENSGT00390000012799.i ENSGT00550000074824.s ENSGT00390000006916.d.b.b ENSGT01030000234987.c ENSGT00940000161442.d ENSGT00940000162043.d ENSGT00550000074912.hb #17 ENSGT00940000156159.l #18 ENSGT01000000222075 ENSGT00940000162596 ENSGT00950000183181.B.a.c #22 ENSGT00940000157224.ab ENSGT00830000128402.a.b ENSGT00940000164487.e ENSGT00940000164884.d ENSGT00950000183209.b.b.i ENSGT00950000182900.A.b.j ENSGT00940000155548.sb.b.a ENSGT00520000055955 ENSGT00940000157547.g ENSGT00940000161472.c.b ENSGT00940000154782.d.c ENSGT00940000154629.B.c.a ENSGT00940000154267.A ENSGT00390000006370.x ENSGT00390000012493.o.b Rainbow trout MODERN SPECIES 17 cfl2 (ENSOMYG00000018883) BAZ1A (ENSOMYG00000018919) zgc:109986 (ENSOMYG00000018928) srp54 (ENSOMYG00000018934) sec23a (ENSOMYG00000019011) ENSOMYG00000071644 clec14a (ENSOMYG00000019213) SSTR1 (ENSOMYG00000050236) foxa1 (ENSOMYG00000019247) psma3 (ENSOMYG00000019274) #17 arid4a (ENSOMYG00000019447) #18 ENSOMYG00000019944 irf2bpl (ENSOMYG00000019953) ENSOMYG00000062140 ENSOMYG00000065040 dact1 (ENSOMYG00000019967) #22 LGALS3 (ENSOMYG00000019978) fbxo34 (ENSOMYG00000019986) atg14 (ENSOMYG00000019993) tbpl2 (ENSOMYG00000020011) ENSOMYG00000020074 mgaa (ENSOMYG00000020687) tyro3 (ENSOMYG00000020877) ENSOMYG00000021099 HHIPL1 (ENSOMYG00000021149) CCDC85C (ENSOMYG00000021336) ENSOMYG00000077281 ENSOMYG00000021360 ENSOMYG00000067158 setd3 (ENSOMYG00000021671) BCL11B (ENSOMYG00000022929) Oncorhynchus_a ANCESTRAL SPECIES 50 ENSGT00390000002766.b.b ENSGT00390000001332.cb ENSGT00940000154940.k.a ENSGT00950000183000.c.b.j ENSGT00940000166431 ENSGT00390000012799.i ENSGT00550000074824.s ENSGT00390000006916.d.b.b ENSGT01030000234987.c ENSGT00940000161442.d ENSGT00940000162043.d ENSGT00550000074912.hb #17 ENSGT00940000156159.l #18 ENSGT01000000222075 ENSGT00940000162596 ENSGT00950000183181.B.a.c #22 ENSGT00940000157224.ab ENSGT00830000128402.a.b ENSGT00940000164487.e ENSGT00940000164884.d ENSGT00950000183209.b.b.i ENSGT00950000182900.A.b.j ENSGT00940000155548.sb.b.a ENSGT00970000197879 ENSGT00940000157547.g ENSGT00940000161472.c.b ENSGT00940000154782.d.c ENSGT00940000154629.B.c.a ENSGT00940000154267.A ENSGT00390000006370.x ENSGT00390000012493.o.b Chinook salmon MODERN SPECIES 32 sptssa (ENSOTSG00005011072) eapp (ENSOTSG00005011075) snx6 (ENSOTSG00005011088) cfl2 (ENSOTSG00005012897) ENSOTSG00005012898 zgc:109986 (ENSOTSG00005012899) srp54 (ENSOTSG00005012900) sec23a (ENSOTSG00005012901) clec14a (ENSOTSG00005012903) SSTR1 (ENSOTSG00005012904) foxa1 (ENSOTSG00005012905) psma3 (ENSOTSG00005000793) #17 arid4a (ENSOTSG00005000933) #18 ENSOTSG00005001156 irf2bpl (ENSOTSG00005001159) dact1 (ENSOTSG00005001161) #22 LGALS3 (ENSOTSG00005001168) fbxo34 (ENSOTSG00005001172) atg14 (ENSOTSG00005001180) tbpl2 (ENSOTSG00005001186) ENSOTSG00005001202 ENSOTSG00005001243 tyro3 (ENSOTSG00005001276) lrrc57 (ENSOTSG00005001305) HHIPL1 (ENSOTSG00005001326) ccdc85ca (ENSOTSG00005002730) setd3 (ENSOTSG00005002744) ENSOTSG00005002788 ENSOTSG00005002799 ENSOTSG00005002832 sptb (ENSOTSG00005002886) Coho salmon MODERN SPECIES 5 sptssa (ENSOKIG00005014576) eapp (ENSOKIG00005014524) snx6 (ENSOKIG00005012994) cfl2 (ENSOKIG00005012912) ENSOKIG00005012901 zgc:109986 (ENSOKIG00005012891) srp54 (ENSOKIG00005012863) sec23a (ENSOKIG00005012806) clec14a (ENSOKIG00005012778) SSTR1 (ENSOKIG00005012773) foxa1 (ENSOKIG00005050373) psma3 (ENSOKIG00005050365) #17 arid4a (ENSOKIG00005050352) #18 ENSOKIG00005050347 irf2bpl (ENSOKIG00005050344) dact1 (ENSOKIG00005050336) #22 ENSOKIG00005050333 LGALS3 (ENSOKIG00005050331) fbxo34 (ENSOKIG00005050329) atg14 (ENSOKIG00005050323) tbpl2 (ENSOKIG00005050320) ENSOKIG00005050318 ENSOKIG00005050302 ENSOKIG00005050263 tyro3 (ENSOKIG00005050239) LRRC57 (ENSOKIG00005050233) HHIPL1 (ENSOKIG00005050219) ccdc85ca (ENSOKIG00005050206) setd3 (ENSOKIG00005050188) BCL11B (ENSOKIG00005050158) ENSOKIG00005050157 Huchen MODERN SPECIES 1051 dact1 (ENSHHUG00000048442) #22 LGALS3 (ENSHHUG00000048453) fbxo34 (ENSHHUG00000048455) atg14 (ENSHHUG00000048457) tbpl2 (ENSHHUG00000048466) ENSHHUG00000048469 ENSHHUG00000048486 ENSHHUG00000048487 ENSHHUG00000048496 tyro3 (ENSHHUG00000048504) lrrc57 (ENSHHUG00000048521) HHIPL1 (ENSHHUG00000048524) ccdc85ca (ENSHHUG00000048530) Salmoninae ANCESTRAL SPECIES 185 ENSGT00390000012799.j ENSGT00550000074824.t ENSGT00940000166955 ENSGT00390000006916.d.b.a ENSGT01030000234987.d ENSGT00940000161442.c ENSGT00940000161150 ENSGT00940000162043.c ENSGT00390000017800 ENSGT00550000074912.ib #17 ENSGT00940000156159.k #18 ENSGT00940000160102.f #20 ENSGT00390000012397 #21 ENSGT00940000160102.e #20 ENSGT00940000162596 ENSGT00950000183181.B.a.d #22 ENSGT00940000165169.b.b.d ENSGT00530000064222.b.i ENSGT00390000011854.a ENSGT00940000159561.l ENSGT00900000141196 ENSGT00940000164564.f.a.c ENSGT00940000156269.a.a.c ENSGT00940000155879.k ENSGT00940000157393.n ENSGT00390000004927 ENSGT00940000164056.h ENSGT00940000162083.e ENSGT00940000159071.y.a.u.a.a ENSGT00940000156384.o.b ENSGT00940000153577.B.k Salmoninae_a ANCESTRAL SPECIES 64 ENSGT00950000183000.c.b.i ENSGT00940000158135.c ENSGT00390000012799.j ENSGT00550000074824.t ENSGT00940000166955 ENSGT00390000006916.d.b.a ENSGT01030000234987.d ENSGT00940000161442.c ENSGT00940000161150 ENSGT00940000162043.c ENSGT00390000017800 ENSGT00550000074912.ib #17 ENSGT00940000156159.k #18 ENSGT00940000160102.f #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a.d #22 ENSGT00940000165169.b.b.d.a ENSGT00530000064222.b.i ENSGT00390000011854.a ENSGT00940000159561.l ENSGT00900000141196 ENSGT00940000164564.f.a.c ENSGT01030000234534.A.d ENSGT00940000156269.a.a.c ENSGT00940000155879.k ENSGT00940000157393.n ENSGT00390000004927 ENSGT00940000162083.e ENSGT00940000159071.y.a.u.a.a ENSGT00940000156384.o.b.b ENSGT00940000153577.B.k Oncorhynchus ANCESTRAL SPECIES 6 ENSGT00950000183000.c.b.i ENSGT00940000158135.c ENSGT00390000012799.j ENSGT00550000074824.t ENSGT00940000166955 ENSGT00390000006916.d.b.a ENSGT01030000234987.d ENSGT00940000161442.c ENSGT00940000161150 ENSGT00940000162043.c ENSGT00390000017800 ENSGT00550000074912.ib.a #17 ENSGT00940000156159.k #18 ENSGT00940000160102.f #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a.d #22 ENSGT00940000165169.b.b.d.a ENSGT00530000064222.b.i ENSGT00390000011854.a ENSGT00940000159561.l ENSGT00900000141196 ENSGT00940000164564.f.a.c ENSGT00940000156269.a.a.c ENSGT00940000155879.k ENSGT00940000157393.n ENSGT00390000004927 ENSGT00940000162083.e ENSGT00940000159071.y.a.u.a.a ENSGT00940000156384.o.b.b ENSGT00940000153577.B.k ENSGT00940000161060.e.a Oncorhynchus_a ANCESTRAL SPECIES 10 ENSGT00950000183000.c.b.i ENSGT00940000158135.c ENSGT00390000012799.j ENSGT00550000074824.t ENSGT00940000166955 ENSGT00390000006916.d.b.a ENSGT01030000234987.d ENSGT00940000161442.c ENSGT00940000161150 ENSGT00940000162043.c ENSGT00390000017800 ENSGT00550000074912.ib.a #17 ENSGT00940000156159.k #18 ENSGT00940000160102.f #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a.d #22 ENSGT00940000165169.b.b.d.a ENSGT00530000064222.b.i ENSGT00390000011854.a ENSGT00940000159561.l ENSGT00900000141196 ENSGT00940000164564.f.a.c ENSGT00940000156269.a.a.c ENSGT00940000155879.k ENSGT00940000157393.n ENSGT00390000004927 ENSGT00940000162083.e ENSGT00940000159071.y.a.u.a.a ENSGT00940000156384.o.b.b ENSGT00940000153577.B.k ENSGT00940000161060.e.a Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 46 ENSOTSG00005039070 eapp (ENSOTSG00005039068) snx6 (ENSOTSG00005035207) cfl2 (ENSOTSG00005035205) BAZ1A (ENSOTSG00005035155) srp54 (ENSOTSG00005035151) sec23a (ENSOTSG00005034756) clec14a (ENSOTSG00005034754) SSTR1 (ENSOTSG00005034753) TTC6 (ENSOTSG00005034752) foxa1 (ENSOTSG00005034751) psma3 (ENSOTSG00005034746) #17 arid4a (ENSOTSG00005034737) #18 timm9 (ENSOTSG00005034734) #20 si:ch211-185a18.2 (ENSOTSG00005034733) #21 dact1 (ENSOTSG00005034730) #22 ENSOTSG00005034729 fbxo34 (ENSOTSG00005034728) atg14 (ENSOTSG00005034725) tbpl2 (ENSOTSG00005034657) jmjd7 (ENSOTSG00005034656) mgaa (ENSOTSG00005034653) tyro3 (ENSOTSG00005034640) haus2 (ENSOTSG00005034636) HHIPL1 (ENSOTSG00005034633) ccdc85ca (ENSOTSG00005034629) CCNK (ENSOTSG00005034628) setd3 (ENSOTSG00005034363) BCL11B (ENSOTSG00005034359) vrk1 (ENSOTSG00005034064) ak7b (ENSOTSG00005034060) Chinook salmon MODERN SPECIES 2 egln3 (ENSOTSG00005017947) ENSOTSG00005017945 eapp (ENSOTSG00005017943) snx6 (ENSOTSG00005014574) cfl2 (ENSOTSG00005014554) BAZ1A (ENSOTSG00005014540) srp54 (ENSOTSG00005014533) sec23a (ENSOTSG00005014268) clec14a (ENSOTSG00005014263) SSTR1 (ENSOTSG00005014262) TTC6 (ENSOTSG00005014261) foxa1 (ENSOTSG00005014260) psma3 (ENSOTSG00005014241) #17 arid4a (ENSOTSG00005014237) #18 timm9 (ENSOTSG00005014235) #20 dact1 (ENSOTSG00005014234) #22 ENSOTSG00005014232 fbxo34 (ENSOTSG00005014231) atg14 (ENSOTSG00005014229) tbpl2 (ENSOTSG00005014203) jmjd7 (ENSOTSG00005014198) ENSOTSG00005014109 ENSOTSG00005014107 tyro3 (ENSOTSG00005014102) lrrc57 (ENSOTSG00005014099) haus2 (ENSOTSG00005014097) HHIPL1 (ENSOTSG00005014090) ccdc85ca (ENSOTSG00005014087) CCNK (ENSOTSG00005014072) setd3 (ENSOTSG00005014037) BCL11B (ENSOTSG00005014030) Coho salmon MODERN SPECIES 27 cfl2 (ENSOKIG00005008698) BAZ1A (ENSOKIG00005008685) zgc:109986 (ENSOKIG00005008601) srp54 (ENSOKIG00005008527) ENSOKIG00005008512 sec23a (ENSOKIG00005008259) clec14a (ENSOKIG00005008219) SSTR1 (ENSOKIG00005008212) TTC6 (ENSOKIG00005008113) foxa1 (ENSOKIG00005008090) PSMA3 (ENSOKIG00005008061) #17 mipol1 (ENSOKIG00005008028) arid4a (ENSOKIG00005007553) #18 ENSOKIG00005007496 si:ch211-185a18.2 (ENSOKIG00005007488) #21 dact1 (ENSOKIG00005007479) #22 ENSOKIG00005007469 fbxo34 (ENSOKIG00005024499) atg14 (ENSOKIG00005024481) tbpl2 (ENSOKIG00005024314) jmjd7 (ENSOKIG00005024248) mgaa (ENSOKIG00005024140) tyro3 (ENSOKIG00005023802) lrrc57 (ENSOKIG00005023769) haus2 (ENSOKIG00005023736) HHIPL1 (ENSOKIG00005023493) ccdc85ca (ENSOKIG00005023452) CCNK (ENSOKIG00005023387) setd3 (ENSOKIG00005023247) BCL11B (ENSOKIG00005023187) ENSOKIG00005023175 Rainbow trout MODERN SPECIES 10 cfl2 (ENSOMYG00000037113) ENSOMYG00000037104 SRP54 (ENSOMYG00000037073) ENSOMYG00000019205 sec23a (ENSOMYG00000037008) clec14a (ENSOMYG00000036972) SSTR1 (ENSOMYG00000036963) TTC6 (ENSOMYG00000036934) foxa1 (ENSOMYG00000036917) ENSOMYG00000066785 mipol1 (ENSOMYG00000036864) psma3 (ENSOMYG00000036901) #17 arid4a (ENSOMYG00000036662) #18 ENSOMYG00000036554 si:ch211-185a18.2 (ENSOMYG00000036525) #21 dact1 (ENSOMYG00000036505) #22 ENSOMYG00000036484 fbxo34 (ENSOMYG00000036474) atg14 (ENSOMYG00000036458) tbpl2 (ENSOMYG00000036367) jmjd7 (ENSOMYG00000036341) ENSOMYG00000036303 ENSOMYG00000058060 tyro3 (ENSOMYG00000036098) ENSOMYG00000036000 ENSOMYG00000035975 HHIPL1 (ENSOMYG00000035903) ENSOMYG00000058128 ccdc85ca (ENSOMYG00000035845) CCNK (ENSOMYG00000035834) setd3 (ENSOMYG00000035725) Salmo ANCESTRAL SPECIES 8 ENSGT00950000183000.c.b.i ENSGT00940000158135.c ENSGT00390000012799.j ENSGT00550000074824.t ENSGT00390000006916.d.b.a ENSGT01030000234987.d ENSGT00940000161442.c ENSGT00940000161150 ENSGT00940000162043.c ENSGT00390000017800 ENSGT00550000074912.ib #17 ENSGT00940000156159.k #18 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00940000162596 ENSGT00950000183181.B.a.d #22 ENSGT00940000165169.b.b.d.a ENSGT00530000064222.b.i ENSGT00390000011854.a ENSGT00940000159561.l ENSGT00900000141196 ENSGT00940000164564.f.a.c ENSGT01030000234534.A.d ENSGT00940000156269.a.a.c ENSGT00940000155879.k ENSGT00940000157393.n ENSGT00390000004927 ENSGT00940000162083.e ENSGT00940000159071.y.a.u.a.a ENSGT00940000156384.o.b.b ENSGT00940000153577.B.k Atlantic salmon MODERN SPECIES SRP54 (ENSSSAG00000077694) ENSSSAG00000118940 sec23a (ENSSSAG00000077707) ENSSSAG00000077787 clec14a (ENSSSAG00000114142) sstr1 (ENSSSAG00000118561) TTC6 (ENSSSAG00000034160) foxa1 (ENSSSAG00000034634) mipol1 (ENSSSAG00000034734) psma3 (ENSSSAG00000034990) #17 ENSSSAG00000095724 arid4a (ENSSSAG00000036764) #18 ENSSSAG00000085836 si:ch211-185a18.2 (ENSSSAG00000039831) #21 irf2bpl (ENSSSAG00000120737) dact1 (ENSSSAG00000039982) #22 ENSSSAG00000096853 ENSSSAG00000040068 fbxo34 (ENSSSAG00000108152) atg14 (ENSSSAG00000040134) jmjd7 (ENSSSAG00000040551) ENSSSAG00000040761 ENSSSAG00000044056 ENSSSAG00000044077 tyro3 (ENSSSAG00000044143) ENSSSAG00000044488 ENSSSAG00000085902 hipl1 (ENSSSAG00000044526) ccdc85ca (ENSSSAG00000093051) CCNK (ENSSSAG00000044699) setd3 (ENSSSAG00000044977) Huchen MODERN SPECIES 766 ENSHHUG00000020690 ENSHHUG00000020686 ENSHHUG00000020671 foxa1 (ENSHHUG00000020665) ENSHHUG00000020659 mipol1 (ENSHHUG00000020623) psma3 (ENSHHUG00000020437) #17 ENSHHUG00000020423 #18 ENSHHUG00000020417 #18 timm9 (ENSHHUG00000020406) #20 irf2bpl (ENSHHUG00000020373) si:ch211-185a18.2 (ENSHHUG00000020366) #21 dact1 (ENSHHUG00000020364) #22 ENSHHUG00000020355 fbxo34 (ENSHHUG00000020353) atg14 (ENSHHUG00000020336) tbpl2 (ENSHHUG00000020136) jmjd7 (ENSHHUG00000020019) ENSHHUG00000020009 ENSHHUG00000020004 ENSHHUG00000019995 Northern pike MODERN SPECIES 14 snx6 (ENSELUG00000003469) cfl2 (ENSELUG00000003457) BAZ1A (ENSELUG00000003446) zgc:109986 (ENSELUG00000003420) srp54 (ENSELUG00000003395) sec23a (ENSELUG00000003344) clec14a (ENSELUG00000003274) SSTR1 (ENSELUG00000003269) ENSELUG00000003227 foxa1 (ENSELUG00000003158) mipol1 (ENSELUG00000003145) psma3 (ENSELUG00000003123) #17 arid4a (ENSELUG00000003087) #18 timm9 (ENSELUG00000003059) #20 si:ch211-185a18.2 (ENSELUG00000003051) #21 dact1 (ENSELUG00000002982) #22 ENSELUG00000002968 ENSELUG00000002974 fbxo34 (ENSELUG00000002952) ENSELUG00000030417 tbpl2 (ENSELUG00000002911) jmjd7 (ENSELUG00000002888) ENSELUG00000002809 ENSELUG00000000072 tyro3 (ENSELUG00000002758) atg14 (ENSELUG00000002940) haus2 (ENSELUG00000002716) hhipl1 (ENSELUG00000002679) ccdc85ca (ENSELUG00000002627) ENSELUG00000002617 setd3 (ENSELUG00000002605) Acanthomorphata ANCESTRAL SPECIES 117 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00390000011854 ENSGT00940000159561 ENSGT00900000141196 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00940000155599.i.b Euacanthomorphacea ANCESTRAL SPECIES 52 ENSGT00940000155999.f ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00390000011854 ENSGT00940000159561 ENSGT00900000141196 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00940000155599.i.b Percomorphaceae ANCESTRAL SPECIES 51 ENSGT00940000155999.f ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000158601 ENSGT00940000161549.a.a ENSGT00940000160678.a ENSGT00950000183024.a.b.a ENSGT00390000001332 ENSGT00390000002766.b.b ENSGT00940000158745 ENSGT00940000158051 ENSGT00810000125473.B ENSGT00940000154553.a.b Percomorphaceae_B ANCESTRAL SPECIES 32 ENSGT00390000006916.d.b ENSGT00940000166602.A ENSGT00390000006916.d.a.b ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 Ovalentaria ANCESTRAL SPECIES 10 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00390000006916.d.a.b ENSGT00940000166602.A ENSGT00390000006916.d.b Ovalentaria_B ANCESTRAL SPECIES 24 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT01030000234930 Cichlidae ANCESTRAL SPECIES 71 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000004927 ENSGT00940000157393 ENSGT01030000234930 Pseudocrenilabrinae ANCESTRAL SPECIES 8 ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00390000004599 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000008624 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000004927 ENSGT00940000157393 ENSGT01030000234930 Pseudocrenilabrinae_A ANCESTRAL SPECIES 6 ENSGT00390000012397 #21 ENSGT00940000165313 ENSGT00390000008624 ENSGT00390000004599.g ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT01030000234592.A.b.a ENSGT00390000017365.b.bc.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000004927 ENSGT00940000157393 ENSGT01030000234930 Haplochromini ANCESTRAL SPECIES 7 ENSGT00390000004599.g ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.C ENSGT01030000234592.A.b.a ENSGT00390000017365.b.bc.a.a.c ENSGT00390000017365.b.ac.a.b ENSGT00990000207027 ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000004927 ENSGT00940000157393 ENSGT01030000234930 Haplochromini_A ANCESTRAL SPECIES 7 ENSGT00390000016577.a ENSGT00390000012397 #21 ENSGT00940000165313 ENSGT00390000008624 ENSGT00390000004599.g ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.C ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000004927 ENSGT00940000157393 ENSGT01030000234930 Haplochromini_B ANCESTRAL SPECIES 80 ENSGT00390000016904.y ENSGT00410000026259 ENSGT00940000158622 ENSGT00390000016577.a ENSGT00940000165313.f ENSGT00390000008624 ENSGT00390000004599.g ENSGT00940000160140.b.s ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00940000154785.A ENSGT00940000156087.b.e ENSGT00940000165313.e ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000004927 ENSGT00940000157393 ENSGT01030000234930 Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 108 ENSMZEG00005027542 si:ch211-185a18.2 (ENSMZEG00005027541) #21 dact1 (ENSMZEG00005027540) #22 lgals3b (ENSMZEG00005027539) fbxo34 (ENSMZEG00005027538) jmjd7 (ENSMZEG00005027537) tbpl2 (ENSMZEG00005027536) atg14 (ENSMZEG00005027535) ENSMZEG00005027534 ENSMZEG00005027533 tyro3 (ENSMZEG00005027532) ENSMZEG00005027531 sec23a (ENSMZEG00005027530) srp54 (ENSMZEG00005027528) ENSMZEG00005027527 lrrc57 (ENSMZEG00005027526) ENSMZEG00005027525 ENSMZEG00005027524 Zebra mbuna MODERN SPECIES 605 dact1 (ENSMZEG00005026188) #22 ENSMZEG00005026189 lgals3b (ENSMZEG00005026191) Eastern happy MODERN SPECIES 10 PXDN (ENSACLG00000017492) MYT1L (ENSACLG00000017447) ENSACLG00000017414 ldah (ENSACLG00000017320) GDF7 (ENSACLG00000017277) ldah (ENSACLG00000017167) APOB (ENSACLG00000017073) DGLUCY (ENSACLG00000017007) GPR68 (ENSACLG00000016959) GPR68 (ENSACLG00000016923) ENSACLG00000016915 ccdc88c (ENSACLG00000016821) PALS1 (ENSACLG00000016771) ENSACLG00000016756 ENSACLG00000016666 #21 dact1 (ENSACLG00000016623) #22 lgals3b (ENSACLG00000016608) fbxo34 (ENSACLG00000016607) jmjd7 (ENSACLG00000016557) tbpl2 (ENSACLG00000016498) atg14 (ENSACLG00000016428) ENSACLG00000016408 ENSACLG00000016339 mgaa (ENSACLG00000016295) tyro3 (ENSACLG00000016238) ENSACLG00000016223 sec23a (ENSACLG00000016100) srp54 (ENSACLG00000015866) ENSACLG00000015844 lrrc57 (ENSACLG00000015813) ENSACLG00000015807 P. nyererei MODERN SPECIES 619 GDF7 (ENSPNYG00000005063) ldah (ENSPNYG00000005253) APOB (ENSPNYG00000005650) DGLUCY (ENSPNYG00000006479) GPR68 (ENSPNYG00000006601) ENSPNYG00000006751 ENSPNYG00000006832 ENSPNYG00000006915 ENSPNYG00000007188 PALS1 (ENSPNYG00000007488) ENSPNYG00000007669 irf2bpl (ENSPNYG00000007722) dact1 (ENSPNYG00000007793) #22 lgals3b (ENSPNYG00000007984) fbxo34 (ENSPNYG00000008075) jmjd7 (ENSPNYG00000008163) tbpl2 (ENSPNYG00000008385) atg14 (ENSPNYG00000008634) ENSPNYG00000008861 mgaa (ENSPNYG00000008961) tyro3 (ENSPNYG00000009180) sec23a (ENSPNYG00000009430) ENSPNYG00000009645 srp54 (ENSPNYG00000009717) ENSPNYG00000009898 lrrc57 (ENSPNYG00000009956) ENSPNYG00000010031 Burton s mouthbrooder MODERN SPECIES 811 ENSHBUG00000000127 irf2bpl (ENSHBUG00000005047) DACT1 (ENSHBUG00000005147) #22 lgals3b (ENSHBUG00000005186) fbxo34 (ENSHBUG00000005200) jmjd7 (ENSHBUG00000005224) tbpl2 (ENSHBUG00000005263) atg14 (ENSHBUG00000000131) ENSHBUG00000005328 ENSHBUG00000005344 ENSHBUG00000005361 tyro3 (ENSHBUG00000005543) ENSHBUG00000005574 sec23a (ENSHBUG00000005643) srp54 (ENSHBUG00000005678) ENSHBUG00000005696 lrrc57 (ENSHBUG00000005712) ENSHBUG00000005721 Lyretail cichlid MODERN SPECIES 363 ENSNBRG00000007137 ENSNBRG00000007104 ENSNBRG00000007099 ldah (ENSNBRG00000007075) ENSNBRG00000007052 ENSNBRG00000006980 DGLUCY (ENSNBRG00000006911) GPR68 (ENSNBRG00000006875) ENSNBRG00000006855 ENSNBRG00000006825 ENSNBRG00000006810 PALS1 (ENSNBRG00000006800) ENSNBRG00000006789 timm9 (ENSNBRG00000006771) #20 irf2bpl (ENSNBRG00000006764) dact1 (ENSNBRG00000006732) #22 lgals3b (ENSNBRG00000006724) fbxo34 (ENSNBRG00000006700) jmjd7 (ENSNBRG00000006670) tbpl2 (ENSNBRG00000006596) atg14 (ENSNBRG00000006547) ENSNBRG00000006455 ENSNBRG00000006420 tyro3 (ENSNBRG00000006213) ENSNBRG00000006158 sec23a (ENSNBRG00000006062) ENSNBRG00000006045 srp54 (ENSNBRG00000006000) ENSNBRG00000005983 ENSNBRG00000005973 lrrc57 (ENSNBRG00000005957) Nile tilapia MODERN SPECIES 10 slirp (ENSONIG00000035467) alkbh1 (ENSONIG00000038544) GDF7 (ENSONIG00000011696) ldah (ENSONIG00000011698) APOB (ENSONIG00000011699) DGLUCY (ENSONIG00000011704) ENSONIG00000038519 GPR68 (ENSONIG00000011710) ENSONIG00000011722 ccdc88c (ENSONIG00000011715) PALS1 (ENSONIG00000011723) ENSONIG00000040790 ENSONIG00000033489 irf2bpl (ENSONIG00000038269) ENSONIG00000011732 #21 dact1 (ENSONIG00000011734) #22 lgals3b (ENSONIG00000011737) fbxo34 (ENSONIG00000033485) jmjd7 (ENSONIG00000011740) tbpl2 (ENSONIG00000011742) atg14 (ENSONIG00000011743) ENSONIG00000011745 ENSONIG00000041427 tyro3 (ENSONIG00000011751) sec23a (ENSONIG00000011758) srp54 (ENSONIG00000011768) ENSONIG00000011776 lrrc57 (ENSONIG00000038185) ENSONIG00000020536 ENSONIG00000034290 ENSONIG00000037687 Midas cichlid MODERN SPECIES 325 alkbh1 (ENSACIG00000000165) slirp (ENSACIG00000023083) timm9 (ENSACIG00000023079) #20 irf2bpl (ENSACIG00000023066) dact1 (ENSACIG00000023046) #22 lgals3b (ENSACIG00000023027) fbxo34 (ENSACIG00000023023) jmjd7 (ENSACIG00000023001) tbpl2 (ENSACIG00000022967) atg14 (ENSACIG00000022956) ENSACIG00000022948 ENSACIG00000022938 tyro3 (ENSACIG00000022877) ENSACIG00000022865 sec23a (ENSACIG00000022846) srp54 (ENSACIG00000022831) ENSACIG00000022817 lrrc57 (ENSACIG00000022804) ENSACIG00000022800 ENSACIG00000022797 Pomacentridae ANCESTRAL SPECIES 78 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00390000006916.d.b ENSGT00940000166602.A ENSGT01030000234930 Pomacentridae_A ANCESTRAL SPECIES 93 ENSGT00940000155599.i.a.b.a ENSGT00940000155599.i.a.b.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00390000006916.d.b ENSGT00940000166602.A Amphiprion ANCESTRAL SPECIES 201 ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00390000011854 ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00390000006916.d.b ENSGT00940000166602.A Orange clownfish MODERN SPECIES 9 NEK9 (ENSAPEG00000000928) ENSAPEG00000000944 ENSAPEG00000000961 ENSAPEG00000001019 JDP2 (ENSAPEG00000001021) FLVCR2 (ENSAPEG00000001034) ERG28 (ENSAPEG00000001045) ENSAPEG00000001073 ENSAPEG00000001097 tgfb3 (ENSAPEG00000001156) snx6 (ENSAPEG00000001199) psma3 (ENSAPEG00000001270) #17 ENSAPEG00000001329 ENSAPEG00000001342 irf2bpl (ENSAPEG00000001359) dact1 (ENSAPEG00000001412) #22 lgals3b (ENSAPEG00000001426) fbxo34 (ENSAPEG00000001441) jmjd7 (ENSAPEG00000001500) atg14 (ENSAPEG00000001523) ENSAPEG00000001606 ENSAPEG00000001718 ENSAPEG00000001862 ENSAPEG00000001892 tyro3 (ENSAPEG00000001920) lrrc57 (ENSAPEG00000001931) ENSAPEG00000001959 srp54 (ENSAPEG00000001977) sec23a (ENSAPEG00000002053) ENSAPEG00000002119 ENSAPEG00000002130 Clown anemonefish MODERN SPECIES 2631 snx6 (ENSAOCG00000004861) psma3 (ENSAOCG00000004830) #17 arid4a (ENSAOCG00000004790) #18 ENSAOCG00000004750 si:ch211-185a18.2 (ENSAOCG00000000183) #21 irf2bpl (ENSAOCG00000004687) dact1 (ENSAOCG00000004652) #22 Spiny chromis MODERN SPECIES 307 dhrs13a.1 (ENSAPOG00000018368) ENSAPOG00000018400 dhrs13a.2 (ENSAPOG00000018409) MDGA2 (ENSAPOG00000018496) slc3a2b (ENSAPOG00000018512) zgc:109986 (ENSAPOG00000018525) ENSAPOG00000000511 ENSAPOG00000018689 cfl2 (ENSAPOG00000018709) ENSAPOG00000018738 snx6 (ENSAPOG00000018791) psma3 (ENSAPOG00000018846) #17 arid4a (ENSAPOG00000018856) #18 timm9 (ENSAPOG00000018873) #20 si:ch211-185a18.2 (ENSAPOG00000000902) #21 dact1 (ENSAPOG00000018896) #22 lgals3b (ENSAPOG00000018904) fbxo34 (ENSAPOG00000018908) jmjd7 (ENSAPOG00000018964) tbpl2 (ENSAPOG00000019081) atg14 (ENSAPOG00000019151) ENSAPOG00000019172 ENSAPOG00000019224 ENSAPOG00000019267 ENSAPOG00000019344 Bicolor damselfish MODERN SPECIES 325 ap4s1 (ENSSPAG00000005192) hectd1 (ENSSPAG00000005095) HEATR5A (ENSSPAG00000004991) dhrs13a.1 (ENSSPAG00000004932) dhrs13a.2 (ENSSPAG00000004890) ENSSPAG00000004851 slc3a2b (ENSSPAG00000004822) zgc:109986 (ENSSPAG00000004813) BAZ1A (ENSSPAG00000004699) cfl2 (ENSSPAG00000004688) snx6 (ENSSPAG00000004652) psma3 (ENSSPAG00000004606) #17 arid4a (ENSSPAG00000004467) #18 timm9 (ENSSPAG00000004448) #20 irf2bpl (ENSSPAG00000004425) dact1 (ENSSPAG00000004415) #22 lgals3b (ENSSPAG00000004402) fbxo34 (ENSSPAG00000004386) jmjd7 (ENSSPAG00000004355) tbpl2 (ENSSPAG00000004314) atg14 (ENSSPAG00000004249) ENSSPAG00000004182 ENSSPAG00000004150 ENSSPAG00000004079 tyro3 (ENSSPAG00000003789) lrrc57 (ENSSPAG00000003729) Atherinomorphae ANCESTRAL SPECIES 39 ENSGT00940000178078 ENSGT00550000074845 ENSGT00950000182865.b.a.a ENSGT00940000158601 ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00390000006916.d.a.b ENSGT00940000166602.A ENSGT00390000006916.d.b Cyprinodontiformes ANCESTRAL SPECIES 40 ENSGT00940000178078 ENSGT00550000074845 ENSGT00950000182865.b.a.a ENSGT00940000158601 ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00510000047092 ENSGT00530000069038.a.a ENSGT00390000015784 ENSGT00390000002751 ENSGT00940000157283 ENSGT00390000018116 ENSGT00940000155654 ENSGT00940000163836.b ENSGT00390000014940 ENSGT00390000017800 ENSGT00940000155999.f ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00940000166602.A ENSGT00550000074824 Cyprinodontoidei ANCESTRAL SPECIES 51 ENSGT00970000193421.B ENSGT00950000183095.a.b.a.a ENSGT00550000074845 ENSGT00950000182865.b.a.a ENSGT00940000158601 ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00510000047092 ENSGT00530000069038.a.a ENSGT00390000015784 ENSGT00390000002751 ENSGT00940000157283 ENSGT00390000018116 ENSGT00940000155654 ENSGT00940000163836.b ENSGT00390000014940 ENSGT00390000017800 ENSGT00940000155999.f ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00940000166602.A ENSGT00550000074824 Poeciliinae ANCESTRAL SPECIES 8 ENSGT00970000193421.B ENSGT00950000183095.a.b.a.a ENSGT00550000074845 ENSGT00950000182865.b.a.a ENSGT00940000158601 ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00510000047092 ENSGT00530000069038.a.a ENSGT00390000015784 ENSGT00390000002751 ENSGT00940000157283 ENSGT00390000018116 ENSGT00940000155654 ENSGT00940000163836.b ENSGT00390000014940 ENSGT00390000017800 ENSGT00940000155999.f ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00940000166602.A ENSGT00550000074824 Poecilia ANCESTRAL SPECIES 57 ENSGT00970000193421.B ENSGT00950000183095.a.b.a.a ENSGT00550000074845 ENSGT00950000182865.b.a.a ENSGT00940000158601 ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00510000047092 ENSGT00530000069038.a.a ENSGT00390000015784 ENSGT00390000002751 ENSGT00940000157283 ENSGT00390000018116 ENSGT00940000155654 ENSGT00940000163836.b ENSGT00390000014940 ENSGT00390000017800 ENSGT00940000155999.f ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00940000166602.A ENSGT00550000074824 Guppy MODERN SPECIES 453 ap4s1 (ENSPREG00000003331) strn3 (ENSPREG00000003359) scfd1 (ENSPREG00000003386) ENSPREG00000003478 g2e3 (ENSPREG00000003497) ehd4 (ENSPREG00000003513) slc3a2b (ENSPREG00000003533) zgc:109986 (ENSPREG00000003548) BAZ1A (ENSPREG00000003601) cfl2 (ENSPREG00000003752) snx6 (ENSPREG00000003810) psma3 (ENSPREG00000003841) #17 ENSPREG00000003879 #18 ENSPREG00000003986 #21 timm9 (ENSPREG00000004051) #20 ENSPREG00000004074 #22 dkc1 (ENSPREG00000004100) ENSPREG00000004205 ENSPREG00000004217 tecpr2 (ENSPREG00000004251) ankrd9 (ENSPREG00000004299) rcor1 (ENSPREG00000004313) traf3 (ENSPREG00000004347) C5orf63 (ENSPREG00000004358) ENSPREG00000004378 ENSPREG00000004419 ENSPREG00000004426 sec23a (ENSPREG00000004443) ENSPREG00000004492 srp54 (ENSPREG00000004505) ENSPREG00000004534 NAME_6 ANCESTRAL SPECIES 163 ENSGT00970000193421.B ENSGT00950000183095.a.b.a.a ENSGT00550000074845 ENSGT00950000182865.b.a.a ENSGT00940000158601 ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00510000047092 ENSGT00530000069038.a.a ENSGT00390000015784 Amazon molly MODERN SPECIES 718 hectd1 (ENSPFOG00000018359) ap4s1 (ENSPFOG00000018416) strn3 (ENSPFOG00000018432) scfd1 (ENSPFOG00000018476) g2e3 (ENSPFOG00000018499) ehd4 (ENSPFOG00000018511) slc3a2b (ENSPFOG00000018522) zgc:109986 (ENSPFOG00000018534) BAZ1A (ENSPFOG00000018550) cfl2 (ENSPFOG00000018584) snx6 (ENSPFOG00000018600) psma3 (ENSPFOG00000018619) #17 arid4a (ENSPFOG00000018637) #18 timm9 (ENSPFOG00000018642) #20 ENSPFOG00000023947 #21 dact1 (ENSPFOG00000023754) #22 dkc1 (ENSPFOG00000018653) ENSPFOG00000018672 cinp (ENSPFOG00000018677) Platyfish MODERN SPECIES 10 ap4s1 (ENSXMAG00000024600) strn3 (ENSXMAG00000009308) scfd1 (ENSXMAG00000029757) g2e3 (ENSXMAG00000021115) ehd4 (ENSXMAG00000021228) slc3a2b (ENSXMAG00000004796) zgc:109986 (ENSXMAG00000022689) BAZ1A (ENSXMAG00000004820) cfl2 (ENSXMAG00000028653) snx6 (ENSXMAG00000004865) psma3 (ENSXMAG00000004893) #17 arid4a (ENSXMAG00000004904) #18 timm9 (ENSXMAG00000029156) #20 ENSXMAG00000004916 #21 irf2bpl (ENSXMAG00000021096) DACT1 (ENSXMAG00000004918) #22 dkc1 (ENSXMAG00000004919) ENSXMAG00000004929 cinp (ENSXMAG00000004931) ENSXMAG00000004932 ENSXMAG00000027901 tyro3 (ENSXMAG00000004939) lrrc57 (ENSXMAG00000013948) ENSXMAG00000027421 srp54 (ENSXMAG00000018315) sec23a (ENSXMAG00000018352) ENSXMAG00000022693 ENSXMAG00000018285 mipol1 (ENSXMAG00000018388) traf3 (ENSXMAG00000018391) rcor1 (ENSXMAG00000018414) NAME_4 ANCESTRAL SPECIES 124 ENSGT00940000156572 ENSGT00970000193421.B ENSGT00950000183095.a.b.a.a ENSGT00550000074845 ENSGT00950000182865.b.a.a ENSGT00940000158601 ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00510000047092 ENSGT00530000069038.a.a ENSGT00390000015784 ENSGT00390000002751 ENSGT00940000157283 ENSGT00390000018116 ENSGT00940000155654 ENSGT00940000163836.b ENSGT00390000014940 ENSGT00390000017800 ENSGT00940000155999.f ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00940000166602.A ENSGT00550000074824 Mummichog MODERN SPECIES 2434 hikeshi (ENSFHEG00000005130) hectd1 (ENSFHEG00000005109) ap4s1 (ENSFHEG00000005021) strn3 (ENSFHEG00000004993) ENSFHEG00000004922 ehd4 (ENSFHEG00000004908) slc3a2b (ENSFHEG00000004886) zgc:109986 (ENSFHEG00000004880) BAZ1A (ENSFHEG00000004873) cfl2 (ENSFHEG00000004854) snx6 (ENSFHEG00000004824) psma3 (ENSFHEG00000004782) #17 arid4a (ENSFHEG00000004741) #18 timm9 (ENSFHEG00000004703) #20 irf2bpl (ENSFHEG00000004684) dact1 (ENSFHEG00000004639) #22 dkc1 (ENSFHEG00000004627) ENSFHEG00000004578 cinp (ENSFHEG00000004564) ENSFHEG00000004552 tecpr2 (ENSFHEG00000004513) ankrd9 (ENSFHEG00000004498) rcor1 (ENSFHEG00000004480) traf3 (ENSFHEG00000000110) ENSFHEG00000004451 C5orf63 (ENSFHEG00000004439) ENSFHEG00000004427 ENSFHEG00000004395 sec23a (ENSFHEG00000004360) ENSFHEG00000004275 srp54 (ENSFHEG00000004263) Sheepshead minnow MODERN SPECIES 222 gnmt (ENSCVAG00000009951) ENSCVAG00000009962 ENSCVAG00000009986 ENSCVAG00000009997 ENSCVAG00000010019 ENSCVAG00000010115 ENSCVAG00000010127 irf2bpl (ENSCVAG00000010137) ENSCVAG00000010144 #22 dkc1 (ENSCVAG00000010155) cinp (ENSCVAG00000010167) ENSCVAG00000010175 tecpr2 (ENSCVAG00000010193) ENSCVAG00000010199 ankrd9 (ENSCVAG00000010207) rcor1 (ENSCVAG00000010213) ENSCVAG00000010228 traf3 (ENSCVAG00000010245) ENSCVAG00000010254 ENSCVAG00000010261 mipol1 (ENSCVAG00000010269) ENSCVAG00000010286 ENSCVAG00000010291 ENSCVAG00000010296 Aplocheiloidei ANCESTRAL SPECIES 107 ENSGT00940000159386 ENSGT00940000178078 ENSGT00550000074845 ENSGT00950000182865.b.a.a ENSGT00940000158601 ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000160678.a ENSGT00950000183024.a.b.a ENSGT00390000001332 ENSGT00390000002766.b.b ENSGT00940000158745 Mangrove rivulus MODERN SPECIES 9 trmt61a (ENSKMAG00000018005) bag5 (ENSKMAG00000018016) coa8 (ENSKMAG00000018040) klc1a (ENSKMAG00000018084) zfyve21 (ENSKMAG00000018120) ENSKMAG00000018137 BTBD6 (ENSKMAG00000018157) ENSKMAG00000018181 cfl2 (ENSKMAG00000018199) snx6 (ENSKMAG00000018216) psma3 (ENSKMAG00000018247) #17 arid4a (ENSKMAG00000018271) #18 timm9 (ENSKMAG00000018340) #20 ENSKMAG00000018354 #21 irf2bpl (ENSKMAG00000018382) dact1 (ENSKMAG00000018404) #22 ENSKMAG00000018424 fbxo34 (ENSKMAG00000018432) ENSKMAG00000018439 ENSKMAG00000018459 jmjd7 (ENSKMAG00000018473) foxg1a (ENSKMAG00000018504) Oryzias ANCESTRAL SPECIES 3 ENSGT00940000178078 ENSGT00550000074845 ENSGT00950000182865.b.a.a ENSGT00940000158601 ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00940000159561.m ENSGT00900000141196 ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a.i.a ENSGT00940000164564.f.a.i.b ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00390000006916.d.a.b ENSGT00940000166602.A Oryzias_b ANCESTRAL SPECIES 12 ENSGT00940000159386 ENSGT00550000074845 ENSGT00950000182865.b.a.a ENSGT00940000158601 ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a.i.a ENSGT00940000164564.f.a.i.b ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00390000006916.d.b ENSGT01030000234930 Indian medaka MODERN SPECIES scfd1 (ENSOMEG00000019697) g2e3 (ENSOMEG00000019733) ehd4 (ENSOMEG00000019758) slc3a2b (ENSOMEG00000019772) ENSOMEG00000019786 zgc:109986 (ENSOMEG00000019806) BAZ1A (ENSOMEG00000019851) cfl2 (ENSOMEG00000019883) snx6 (ENSOMEG00000019916) psma3 (ENSOMEG00000019957) #17 ENSOMEG00000019966 #18 ENSOMEG00000019997 #18 timm9 (ENSOMEG00000020017) #20 irf2bpl (ENSOMEG00000020036) ENSOMEG00000020089 #21 DACT1 (ENSOMEG00000020108) #22 lgals3b (ENSOMEG00000000530) fbxo34 (ENSOMEG00000020131) jmjd7 (ENSOMEG00000020141) tbpl2 (ENSOMEG00000020157) atg14 (ENSOMEG00000020206) ENSOMEG00000020475 ENSOMEG00000020559 ENSOMEG00000020709 ENSOMEG00000020768 tyro3 (ENSOMEG00000020823) lrrc57 (ENSOMEG00000020880) ENSOMEG00000020910 srp54 (ENSOMEG00000020952) ENSOMEG00000020963 ENSOMEG00000020971 Javanese ricefish MODERN SPECIES 14 ENSOJAG00000015909 ap4s1 (ENSOJAG00000015956) strn3 (ENSOJAG00000015993) coch (ENSOJAG00000016617) scfd1 (ENSOJAG00000016699) g2e3 (ENSOJAG00000017345) ehd4 (ENSOJAG00000017357) ENSOJAG00000017419 zgc:109986 (ENSOJAG00000017424) cfl2 (ENSOJAG00000017459) snx6 (ENSOJAG00000017479) psma3 (ENSOJAG00000017765) #17 arid4a (ENSOJAG00000017865) #18 ENSOJAG00000017907 ENSOJAG00000017930 #21 ENSOJAG00000017941 #22 lgals3b (ENSOJAG00000017991) fbxo34 (ENSOJAG00000018033) jmjd7 (ENSOJAG00000018049) tbpl2 (ENSOJAG00000018061) atg14 (ENSOJAG00000018074) ENSOJAG00000018125 ENSOJAG00000018183 ENSOJAG00000018338 tyro3 (ENSOJAG00000018371) lrrc57 (ENSOJAG00000018619) ENSOJAG00000018628 srp54 (ENSOJAG00000018632) sec23a (ENSOJAG00000018656) ENSOJAG00000018739 ENSOJAG00000018785 Oryzias_a ANCESTRAL SPECIES 11 ENSGT00940000178078 ENSGT00550000074845 ENSGT00950000182865.b.a.a ENSGT00940000158601 ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00940000159561.m ENSGT00900000141196 ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a.i.a ENSGT00940000164564.f.a.i.b ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00390000006916.d.a.b ENSGT00940000166602.A Chinese medaka MODERN SPECIES 631 hikeshi (ENSOSIG00000013285) ENSOSIG00000013288 ap4s1 (ENSOSIG00000013343) strn3 (ENSOSIG00000013379) coch (ENSOSIG00000017074) g2e3 (ENSOSIG00000017364) ehd4 (ENSOSIG00000017520) ENSOSIG00000017806 zgc:109986 (ENSOSIG00000017928) cfl2 (ENSOSIG00000017937) snx6 (ENSOSIG00000017956) psma3 (ENSOSIG00000018012) #17 ENSOSIG00000018060 #18 timm9 (ENSOSIG00000018069) #20 irf2bpl (ENSOSIG00000018078) DACT1 (ENSOSIG00000018120) #22 lgals3b (ENSOSIG00000018121) fbxo34 (ENSOSIG00000018122) tbpl2 (ENSOSIG00000018132) atg14 (ENSOSIG00000018138) ENSOSIG00000018140 ENSOSIG00000018164 tyro3 (ENSOSIG00000018184) lrrc57 (ENSOSIG00000018200) ENSOSIG00000018204 srp54 (ENSOSIG00000018208) ENSOSIG00000018212 ENSOSIG00000018217 ENSOSIG00000018219 C5orf63 (ENSOSIG00000018222) traf3 (ENSOSIG00000018232) Japanese Medaka HdrR MODERN SPECIES 14 coch (ENSORLG00000010591) ENSORLG00000022055 scfd1 (ENSORLG00000010536) g2e3 (ENSORLG00000010482) ehd4 (ENSORLG00000010433) ENSORLG00000010405 zgc:109986 (ENSORLG00000010399) BAZ1A (ENSORLG00000010374) cfl2 (ENSORLG00000010332) snx6 (ENSORLG00000010318) psma3 (ENSORLG00000010288) #17 ENSORLG00000010245 #18 ENSORLG00000027454 #18 ENSORLG00000021949 ENSORLG00000023322 #21 ENSORLG00000010158 #22 lgals3b (ENSORLG00000028430) fbxo34 (ENSORLG00000023986) tbpl2 (ENSORLG00000028018) jmjd7 (ENSORLG00000010130) atg14 (ENSORLG00000010114) ENSORLG00000025253 ENSORLG00000010109 ENSORLG00000022155 ENSORLG00000010072 tyro3 (ENSORLG00000010056) lrrc57 (ENSORLG00000010037) ENSORLG00000024769 SRP54 (ENSORLG00000010027) ENSORLG00000025714 ENSORLG00000026311 Percomorphaceae_C ANCESTRAL SPECIES 26 ENSGT00940000161442 ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00940000166602.A ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 Eupercaria ANCESTRAL SPECIES 9 ENSGT00390000017800 ENSGT00940000155999.f ENSGT00940000161442 ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00940000156646.d ENSGT00940000155369.A.d.a ENSGT00940000155599.i.b Eupecaria_A ANCESTRAL SPECIES 10 ENSGT00390000017800 ENSGT00940000155999.f ENSGT00940000161442 ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00940000156646.d ENSGT00940000155369.A.d.a ENSGT00940000155599.i.b Eupecaria_B ANCESTRAL SPECIES 11 ENSGT00390000017800 ENSGT00940000155999.f ENSGT00940000161442 ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00940000156646.d ENSGT00940000155369.A.d.a ENSGT00940000155599.i.b Eupecaria_C ANCESTRAL SPECIES 54 ENSGT00940000163836.b ENSGT00390000014940 ENSGT00940000161442 ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00510000047092 ENSGT00980000203115 ENSGT00390000015784 ENSGT00390000002751 ENSGT00940000157283 Eupercaria_incertae_sedis ANCESTRAL SPECIES 65 ENSGT00940000155999.f ENSGT00940000161442 ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000165313 ENSGT00940000162596 ENSGT00940000160102 #20 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00510000047092 ENSGT00980000203115 ENSGT00390000015784 ENSGT00390000002751 ENSGT00940000157283 ENSGT00390000018116 ENSGT00940000155654 ENSGT00940000163836.b ENSGT00390000014940 European seabass MODERN SPECIES 3 ENSDLAG00005033245 ENSDLAG00005017202 ENSDLAG00005031765 ENSDLAG00005031907 ENSDLAG00005002624 ENSDLAG00005028427 ENSDLAG00005034732 ENSDLAG00005003892 ENSDLAG00005021750 ENSDLAG00005032201 ENSDLAG00005011959 atg14 (ENSDLAG00005029912) ENSDLAG00005030363 ENSDLAG00005027035 ENSDLAG00005028506 ENSDLAG00005032940 #22 si:ch211-185a18.2 (ENSDLAG00005027940) #21 timm9 (ENSDLAG00005028547) #20 arid4a (ENSDLAG00005034746) #18 psma3 (ENSDLAG00005016689) #17 ENSDLAG00005018471 ENSDLAG00005029600 ENSDLAG00005028537 ENSDLAG00005027873 ENSDLAG00005030741 ENSDLAG00005028170 arrb1 (ENSDLAG00005000595) ENSDLAG00005029671 ENSDLAG00005031347 ENSDLAG00005033830 ENSDLAG00005027659 Large yellow croaker MODERN SPECIES 495 diras1b (ENSLCRG00005017082) zgc:101744 (ENSLCRG00005017080) ENSLCRG00005017079 ENSLCRG00005017078 sec23a (ENSLCRG00005017002) SRP54 (ENSLCRG00005016995) zgc:109986 (ENSLCRG00005016994) BAZ1A (ENSLCRG00005016992) cfl2 (ENSLCRG00005016990) snx6 (ENSLCRG00005016913) psma3 (ENSLCRG00005016910) #17 arid4a (ENSLCRG00005016909) #18 ENSLCRG00005016903 irf2bpl (ENSLCRG00005016902) ENSLCRG00005016901 #21 dact1 (ENSLCRG00005016900) #22 dkc1 (ENSLCRG00005016262) cinp (ENSLCRG00005016256) ENSLCRG00005016254 tecpr2 (ENSLCRG00005016206) ENSLCRG00005016201 ankrd9 (ENSLCRG00005016199) rcor1 (ENSLCRG00005016195) ENSLCRG00005016192 traf3 (ENSLCRG00005016184) atg14 (ENSLCRG00005016181) tbpl2 (ENSLCRG00005016177) jmjd7 (ENSLCRG00005016170) fbxo34 (ENSLCRG00005016169) lgals3b (ENSLCRG00005016168) ENSLCRG00005016167 Perciformes ANCESTRAL SPECIES 36 ENSGT00940000157283 ENSGT00390000002751 ENSGT00390000015784 ENSGT00530000069038.a.a ENSGT00510000047092 ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00940000156646.d ENSGT00940000155369.A.d.a ENSGT00940000155599.i.b Cottioidei ANCESTRAL SPECIES 66 ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000157224.ab.c ENSGT00940000165169.b.a ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00940000156646.d ENSGT00940000155369.A.d.a ENSGT00940000155599.i.b ENSGT00390000004056 ENSGT00390000006205.b ENSGT00940000156572 Lumpfish MODERN SPECIES 14 tecpr2 (ENSCLMG00005015614) cinp (ENSCLMG00005015611) ENSCLMG00005015610 ENSCLMG00005015609 ENSCLMG00005015607 dkc1 (ENSCLMG00005015157) sec23a (ENSCLMG00005014923) srp54 (ENSCLMG00005014901) zgc:109986 (ENSCLMG00005014896) BAZ1A (ENSCLMG00005014892) cfl2 (ENSCLMG00005014876) snx6 (ENSCLMG00005013263) psma3 (ENSCLMG00005013255) #17 arid4a (ENSCLMG00005013253) #18 timm9 (ENSCLMG00005013250) #20 dact1 (ENSCLMG00005013247) #22 ENSCLMG00005013244 jmjd7 (ENSCLMG00005013241) tbpl2 (ENSCLMG00005013238) atg14 (ENSCLMG00005013237) ENSCLMG00005013235 ENSCLMG00005013233 tyro3 (ENSCLMG00005013163) lrrc57 (ENSCLMG00005013161) ENSCLMG00005013160 ENSCLMG00005012670 ENSCLMG00005012632 dhrs13a.2 (ENSCLMG00005012631) hikeshi (ENSCLMG00005012630) HEATR5A (ENSCLMG00005009093) ENSCLMG00005009068 Perciformes_a ANCESTRAL SPECIES 48 ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000165313 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00940000156646.d ENSGT00940000155369.A.d.a ENSGT00940000155599.i.b Pike perch MODERN SPECIES 192 snx6 (ENSSLUG00000022496) psma3 (ENSSLUG00000022386) #17 ENSSLUG00000022369 #18 ENSSLUG00000022363 irf2bpl (ENSSLUG00000022316) dact1 (ENSSLUG00000022308) #22 lgals3b (ENSSLUG00000022302) fbxo34 (ENSSLUG00000022291) jmjd7 (ENSSLUG00000021935) tbpl2 (ENSSLUG00000021915) atg14 (ENSSLUG00000021891) ENSSLUG00000021878 ENSSLUG00000021820 ENSSLUG00000021809 ENSSLUG00000021801 ENSSLUG00000021780 tyro3 (ENSSLUG00000021735) lrrc57 (ENSSLUG00000021730) ENSSLUG00000021727 ENSSLUG00000021724 dhrs13a.1 (ENSSLUG00000021710) Channel bull blenny MODERN SPECIES 14 pax9 (ENSCGOG00000023394) NKX2-8 (ENSCGOG00000023392) nkx2.1 (ENSCGOG00000023391) mbip (ENSCGOG00000023387) RPS6KA5 (ENSCGOG00000023253) hadhab (ENSCGOG00000022932) kif3cb (ENSCGOG00000022910) ENSCGOG00000022905 dtnbb (ENSCGOG00000022062) dnmt3ab (ENSCGOG00000021228) dpysl5a (ENSCGOG00000021008) mapre3a (ENSCGOG00000020998) OTOF (ENSCGOG00000020965) ENSCGOG00000020948 ENSCGOG00000020943 dact1 (ENSCGOG00000020934) #22 lgals3b (ENSCGOG00000020931) jmjd7 (ENSCGOG00000020893) tbpl2 (ENSCGOG00000020891) atg14 (ENSCGOG00000020885) ENSCGOG00000020884 ENSCGOG00000020864 ENSCGOG00000020860 ENSCGOG00000020858 tyro3 (ENSCGOG00000020834) lrrc57 (ENSCGOG00000020832) slc3a2b (ENSCGOG00000020793) MDGA2 (ENSCGOG00000020243) dhrs13a.2 (ENSCGOG00000020222) dhrs13a.1 (ENSCGOG00000020129) hikeshi (ENSCGOG00000020116) Ballan wrasse MODERN SPECIES 1093 dact1 (ENSLBEG00000019550) #22 ENSLBEG00000019561 lgals3b (ENSLBEG00000019584) fbxo34 (ENSLBEG00000019593) jmjd7 (ENSLBEG00000019616) ENSLBEG00000019649 tbpl2 (ENSLBEG00000019662) Percomorphaceae_D ANCESTRAL SPECIES 10 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00950000183519 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT01030000234930 Anabantaria ANCESTRAL SPECIES 10 ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00950000183519 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00390000006916.d.b ENSGT01030000234930 ENSGT00510000047092 Anabantoidei ANCESTRAL SPECIES 9 ENSGT00390000006205.b ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00390000012397 #21 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00390000006916.d.b ENSGT01030000234930 ENSGT00510000047092 Climbing perch MODERN SPECIES 13 ENSATEG00000014913 ENSATEG00000014717 ENSATEG00000014622 ENSATEG00000014605 ENSATEG00000014580 ENSATEG00000014569 zgc:109986 (ENSATEG00000014565) BAZ1A (ENSATEG00000014536) ENSATEG00000028863 cfl2 (ENSATEG00000028424) snx6 (ENSATEG00000014485) psma3 (ENSATEG00000014448) #17 arid4a (ENSATEG00000014386) #18 timm9 (ENSATEG00000014424) #20 irf2bpl (ENSATEG00000025496) dact1 (ENSATEG00000029802) #22 lgals3b (ENSATEG00000025771) fbxo34 (ENSATEG00000026495) jmjd7 (ENSATEG00000014314) ENSATEG00000028601 atg14 (ENSATEG00000014255) ENSATEG00000014240 ENSATEG00000027357 ENSATEG00000014152 ENSATEG00000029988 ENSATEG00000014033 ENSATEG00000014000 tyro3 (ENSATEG00000013957) ENSATEG00000013936 ENSATEG00000013925 ENSATEG00000013877 Siamese fighting fish MODERN SPECIES 12 hikeshi (ENSBSLG00000011962) DHRS13 (ENSBSLG00000011482) dhrs13a.2 (ENSBSLG00000011472) slc3a2b (ENSBSLG00000011462) ENSBSLG00000011458 ENSBSLG00000010948 zgc:109986 (ENSBSLG00000010904) BAZ1A (ENSBSLG00000010664) cfl2 (ENSBSLG00000010594) snx6 (ENSBSLG00000009550) psma3 (ENSBSLG00000009358) #17 arid4a (ENSBSLG00000009126) #18 timm9 (ENSBSLG00000009099) #20 ENSBSLG00000009094 ENSBSLG00000008973 #21 dact1 (ENSBSLG00000008942) #22 lgals3b (ENSBSLG00000008918) fbxo34 (ENSBSLG00000008704) tbpl2 (ENSBSLG00000008680) atg14 (ENSBSLG00000008664) ENSBSLG00000008622 jmjd7 (ENSBSLG00000008449) tbpl2 (ENSBSLG00000008412) atg14 (ENSBSLG00000008373) ENSBSLG00000008307 ENSBSLG00000008247 ENSBSLG00000008215 ENSBSLG00000008205 tyro3 (ENSBSLG00000007942) lrrc57 (ENSBSLG00000007901) haus2 (ENSBSLG00000007845) Zig-zag eel MODERN SPECIES 50 ENSMAMG00000007058 ENSMAMG00000007038 ENSMAMG00000007020 ENSMAMG00000007009 ENSMAMG00000007004 ENSMAMG00000025765 zgc:109986 (ENSMAMG00000006979) BAZ1A (ENSMAMG00000006945) cfl2 (ENSMAMG00000006926) snx6 (ENSMAMG00000006844) psma3 (ENSMAMG00000025722) #17 arid4a (ENSMAMG00000006769) #18 ENSMAMG00000006749 si:ch211-185a18.2 (ENSMAMG00000006578) #21 dact1 (ENSMAMG00000006571) #22 lgals3b (ENSMAMG00000006554) fbxo34 (ENSMAMG00000006547) jmjd7 (ENSMAMG00000006499) ENSMAMG00000005937 atg14 (ENSMAMG00000005886) ENSMAMG00000005859 ENSMAMG00000024748 ENSMAMG00000005499 ENSMAMG00000005466 ENSMAMG00000005448 ENSMAMG00000005427 ENSMAMG00000027822 ENSMAMG00000005406 ENSMAMG00000005394 ankrd9 (ENSMAMG00000005333) Carangaria ANCESTRAL SPECIES 10 ENSGT00390000006205.b ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT01030000234930 Carangaria_A ANCESTRAL SPECIES 72 ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799.g ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912.kb #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT01030000234930 Seriola ANCESTRAL SPECIES 46 ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799.g ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912.kb #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000182030 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00940000166602.A ENSGT00390000006916.d.b Greater amberjack MODERN SPECIES 194 MDGA2 (ENSSDUG00000000953) slc3a2b (ENSSDUG00000000942) trim35-31 (ENSSDUG00000000797) zgc:109986 (ENSSDUG00000000778) BAZ1A (ENSSDUG00000000605) cfl2 (ENSSDUG00000000590) ENSSDUG00000000573 ENSSDUG00000000528 snx6 (ENSSDUG00000000471) psma3 (ENSSDUG00000000428) #17 arid4a (ENSSDUG00000000343) #18 timm9 (ENSSDUG00000000321) #20 irf2bpl (ENSSDUG00000000251) dact1 (ENSSDUG00000000149) #22 lgals3b (ENSSDUG00000000136) fbxo34 (ENSSDUG00000000126) jmjd7 (ENSSDUG00000019085) tbpl2 (ENSSDUG00000019063) atg14 (ENSSDUG00000019014) ENSSDUG00000018999 ENSSDUG00000018987 ENSSDUG00000018918 ENSSDUG00000018907 tyro3 (ENSSDUG00000018685) lrrc57 (ENSSDUG00000018666) ENSSDUG00000018616 srp54 (ENSSDUG00000018586) ENSSDUG00000018576 sec23a (ENSSDUG00000018503) Yellowtail amberjack MODERN SPECIES 3190 dact1 (ENSSLDG00000010863) #22 ENSSLDG00000010830 fbxo34 (ENSSLDG00000010801) jmjd7 (ENSSLDG00000010772) tbpl2 (ENSSLDG00000010726) atg14 (ENSSLDG00000010691) ENSSLDG00000010669 ENSSLDG00000010653 ENSSLDG00000010635 ENSSLDG00000010618 tyro3 (ENSSLDG00000010591) lrrc57 (ENSSLDG00000010567) haus2 (ENSSLDG00000010545) srp54 (ENSSLDG00000010476) ENSSLDG00000010456 sec23a (ENSSLDG00000010387) Barramundi perch MODERN SPECIES 57 ENSLCAG00010027660 CFL2 (ENSLCAG00010027659) snx6 (ENSLCAG00010027652) psma3 (ENSLCAG00010027630) #17 arid4a (ENSLCAG00010027607) #18 ENSLCAG00010027604 irf2bpl (ENSLCAG00010027602) dact1 (ENSLCAG00010027599) #22 jmjd7 (ENSLCAG00010027590) tbpl2 (ENSLCAG00010027586) atg14 (ENSLCAG00010027583) lrrc57 (ENSLCAG00010027581) ATP1B2 (ENSLCAG00010027579) ENSLCAG00010027576 ENSLCAG00010027571 MEPCE (ENSLCAG00010027564) Pleuronectoidei ANCESTRAL SPECIES 5 ENSGT00940000156572 ENSGT00390000006205.b ENSGT00390000004056 ENSGT00940000155599.i.b ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #17 ENSGT00940000156159 #18 ENSGT00940000160102 #20 ENSGT00940000162596 ENSGT00950000183181.B.a #22 ENSGT00940000165169.b.a ENSGT00530000064222.b ENSGT00900000141196 ENSGT00940000159561.m ENSGT00390000011854 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00940000177904 ENSGT00550000074824 ENSGT00390000006916.d.b ENSGT01030000234930 Turbot MODERN SPECIES 8 ENSSMAG00000035441 ENSSMAG00000030108 foxg1a (ENSSMAG00000022260) ENSSMAG00000026503 ehd4 (ENSSMAG00000002935) ENSSMAG00000002958 zgc:109986 (ENSSMAG00000012609) BAZ1A (ENSSMAG00000012566) cfl2 (ENSSMAG00000012418) snx6 (ENSSMAG00000012367) ENSSMAG00000030491 psma3 (ENSSMAG00000012319) #17 arid4a (ENSSMAG00000012268) #18 timm9 (ENSSMAG00000035879) #20 irf2bpl (ENSSMAG00000012255) dact1 (ENSSMAG00000033904) #22 lgals3b (ENSSMAG00000002149) fbxo34 (ENSSMAG00000002152) jmjd7 (ENSSMAG00000002155) ENSSMAG00000002190 atg14 (ENSSMAG00000032144) ENSSMAG00000002211 ENSSMAG00000002219 ENSSMAG00000002227 tyro3 (ENSSMAG00000002269) ENSSMAG00000002401 ENSSMAG00000002431 SRP54 (ENSSMAG00000002441) ENSSMAG00000002497 ENSSMAG00000021449 ENSSMAG00000002537 Tongue sole MODERN SPECIES slc3a2b (ENSCSEG00000011824) zgc:109986 (ENSCSEG00000011830) ENSCSEG00000011841 ENSCSEG00000011854 cfl2 (ENSCSEG00000011860) snx6 (ENSCSEG00000011868) psma3 (ENSCSEG00000011909) #17 arid4a (ENSCSEG00000011930) #18 ENSCSEG00000011975 lrrc57 (ENSCSEG00000011983) tyro3 (ENSCSEG00000012013) ENSCSEG00000012077 ENSCSEG00000012157 ENSCSEG00000012167 irf2bpl (ENSCSEG00000012173) ENSCSEG00000012176 #22 lgals3b (ENSCSEG00000012178) tbpl2 (ENSCSEG00000012205) jmjd7 (ENSCSEG00000012358) atg14 (ENSCSEG00000012369) ENSCSEG00000012379 srp54 (ENSCSEG00000012392) sec23a (ENSCSEG00000012432) ENSCSEG00000012464 ENSCSEG00000012467 ENSCSEG00000012471 mipol1 (ENSCSEG00000012492) C5orf63 (ENSCSEG00000012521) traf3 (ENSCSEG00000012530) ankrd9 (ENSCSEG00000012553) tecpr2 (ENSCSEG00000012558) Pinecone sodierfish MODERN SPECIES 14 ENSMMDG00005008157 foxa1 (ENSMMDG00005008159) ENSMMDG00005008170 sec23a (ENSMMDG00005008196) srp54 (ENSMMDG00005008246) zgc:109986 (ENSMMDG00005008251) BAZ1A (ENSMMDG00005008256) ENSMMDG00005008261 cfl2 (ENSMMDG00005008265) snx6 (ENSMMDG00005008315) psma3 (ENSMMDG00005009571) #17 fbxo34 (ENSMMDG00005009586) atg14 (ENSMMDG00005009591) timm9 (ENSMMDG00005009597) #20 ENSMMDG00005009619 #21 dact1 (ENSMMDG00005009624) #22 ENSMMDG00005009644 ENSMMDG00005009645 lrrc57 (ENSMMDG00005009646) ENSMMDG00005009655 ENSMMDG00005009657 ENSMMDG00005009658 ENSMMDG00005009662 ENSMMDG00005009675 ENSMMDG00005009677 tyro3 (ENSMMDG00005009690) ENSMMDG00005009951 ENSMMDG00005009961 ENSMMDG00005009965 ENSMMDG00005009970 ENSMMDG00005009975 Spotted gar MODERN SPECIES 673 snx6 (ENSLOCG00000009469) cfl2 (ENSLOCG00000009463) BAZ1A (ENSLOCG00000009448) srp54 (ENSLOCG00000009440) ENSLOCG00000009429 sec23a (ENSLOCG00000009415) ENSLOCG00000009400 SSTR1 (ENSLOCG00000017701) TTC6 (ENSLOCG00000009393) foxa1 (ENSLOCG00000009382) mipol1 (ENSLOCG00000009377) psma3 (ENSLOCG00000009368) #17 arid4a (ENSLOCG00000009355) #18 timm9 (ENSLOCG00000009345) #20 si:ch211-185a18.2 (ENSLOCG00000009320) #21 dact1 (ENSLOCG00000009312) #22 ENSLOCG00000009301 daam1b (ENSLOCG00000009284) #24 GPR135 (ENSLOCG00000017700) #25 L3HYPDH (ENSLOCG00000009274) jkamp (ENSLOCG00000009267) ENSLOCG00000009257 LRFN5 (ENSLOCG00000009242) pnn (ENSLOCG00000009234) gemin2 (ENSLOCG00000009221) ENSLOCG00000009207 FBXO33 (ENSLOCG00000009198) zgc:153383 (ENSLOCG00000009191) ppp2r3c (ENSLOCG00000009180) PRORP (ENSLOCG00000009172) psma6a (ENSLOCG00000009164) Reedfish MODERN SPECIES 7 eapp (ENSECRG00000016516) snx6 (ENSECRG00000016414) cfl2 (ENSECRG00000016375) BAZ1A (ENSECRG00000016298) srp54 (ENSECRG00000016207) sec23a (ENSECRG00000016145) SSTR1 (ENSECRG00000016118) ENSECRG00000016099 foxa1 (ENSECRG00000016084) mipol1 (ENSECRG00000016052) psma3 (ENSECRG00000015974) #17 arid4a (ENSECRG00000015920) #18 timm9 (ENSECRG00000015902) #20 irf2bpl (ENSECRG00000015852) si:ch211-185a18.2 (ENSECRG00000015790) #21 dact1 (ENSECRG00000015766) #22 ENSECRG00000015746 ENSECRG00000015684 ENSECRG00000015643 ENSECRG00000015559 ENSECRG00000015523 ENSECRG00000015497 ENSECRG00000015385 ENSECRG00000022813 ENSECRG00000022809 ENSECRG00000022808 ENSECRG00000022807 ENSECRG00000022803 ENSECRG00000022800 ENSECRG00000022797 rbfox1l (ENSECRG00000022793) Elephant shark MODERN SPECIES 1513 exoc5 (ENSCMIG00000000611) #10 ap5m1 (ENSCMIG00000000893) #11 naa30 (ENSCMIG00000000905) #12 ENSCMIG00000000909 #13 SLC35F4 (ENSCMIG00000000913) #14 ENSCMIG00000000919 #15 actr10 (ENSCMIG00000000930) #16 ENSCMIG00000000948 psma3 (ENSCMIG00000001027) #17 arid4a (ENSCMIG00000001314) #18 ENSCMIG00000001560 timm9 (ENSCMIG00000001565) #20 ENSCMIG00000001573 #21 ENSCMIG00000001587 #21 irf2bpl (ENSCMIG00000001619) dact1 (ENSCMIG00000001648) #22 ENSCMIG00000001652 daam1b (ENSCMIG00000001686) #24 L3HYPDH (ENSCMIG00000001723) jkamp (ENSCMIG00000001735) ENSCMIG00000001750 ENSCMIG00000001771 acat2 (ENSCMIG00000001776) LRFN5 (ENSCMIG00000001782) gemin2 (ENSCMIG00000001812) trappc6b (ENSCMIG00000001830) pnn (ENSCMIG00000001851) ENSCMIG00000001900 FBXO33 (ENSCMIG00000001932) zgc:153383 (ENSCMIG00000001938) ppp2r3c (ENSCMIG00000001986) Gnathostomata ANCESTRAL SPECIES ENSGT00950000183181.B.b ##22 Elephant shark MODERN SPECIES 693 ENSCMIG00000002660 ##22 Euteleostomi ANCESTRAL SPECIES ENSGT00950000183181.B.b ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00950000183181.B.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00950000183181.B.b ##22 Amniota ANCESTRAL SPECIES 80 ENSGT00390000018039 ENSGT00940000155666.d ENSGT00940000160667 ENSGT00940000153892.A ENSGT00940000160230 ENSGT00530000063461.B ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745 Sauria ANCESTRAL SPECIES 54 ENSGT00960000190608 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166445 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000167604 ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00950000185426 ENSGT00940000162237 ENSGT00940000162019 ENSGT00390000007686.a ENSGT00390000017045 ENSGT00940000166203 Archelosauria ANCESTRAL SPECIES 33 ENSGT00940000160719 ENSGT00550000075063 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000154553.a.a ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00960000193250 ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166445 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000167604 ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00950000185426 ENSGT00940000162237 ENSGT00940000162019 ENSGT00390000007686.a ENSGT00390000017045 ENSGT00940000166203 Cryptodira ANCESTRAL SPECIES 35 ENSGT00940000163335 ENSGT00940000160719 ENSGT00550000075063 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00960000193250 ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166445 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000167604 ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00950000185426 ENSGT00940000162237 ENSGT00940000162019 ENSGT00390000007686.a ENSGT00390000017045 ENSGT00940000166203 Testudinoidea ANCESTRAL SPECIES 30 ENSGT00940000163335 ENSGT00940000160719 ENSGT00550000075063 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b.j ENSGT00970000193421.A ENSGT00940000159485.m ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183136.a.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166445 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000167604.d ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00950000185426 ENSGT00940000162237 ENSGT00940000162019 ENSGT00390000007686.a ENSGT00390000017045 ENSGT00940000166203 Testudinidae ANCESTRAL SPECIES 36 ENSGT00940000163335 ENSGT00940000160719 ENSGT00550000075063 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b.j ENSGT00970000193421.A ENSGT00940000159485.m ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183136.a.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166445 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000167604.d ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00950000185426 ENSGT00940000162237 ENSGT00940000180177 ENSGT00940000162019 ENSGT00390000007686.a ENSGT00390000017045 Goode s thornscrub tortoise MODERN SPECIES 134 ENSGEVG00005006247 ENSGEVG00005006319 ENSGEVG00005006349 TBCB (ENSGEVG00005006394) ENSGEVG00005006415 ENSGEVG00005006429 TMEM160 (ENSGEVG00005006452) ENSGEVG00005006465 ARHGAP35 (ENSGEVG00005006490) AP2S1 (ENSGEVG00005006508) SLC1A5 (ENSGEVG00005006522) FKRP (ENSGEVG00005006541) STRN4 (ENSGEVG00005006716) PRKD2 (ENSGEVG00005007536) ENSGEVG00005007568 DACT3 (ENSGEVG00005007584) ##22 GNG8 (ENSGEVG00005007618) PTGIR (ENSGEVG00005007642) CALM3 (ENSGEVG00005007668) ENSGEVG00005007705 PPP5C (ENSGEVG00005007903) ENSGEVG00005008365 ENSGEVG00005008379 SNRPD2 (ENSGEVG00005008411) ENSGEVG00005008436 ENSGEVG00005008454 ENSGEVG00005008479 ENSGEVG00005008491 ENSGEVG00005008510 DMPK (ENSGEVG00005008534) DMWD (ENSGEVG00005008598) Abingdon island giant tortoise MODERN SPECIES 2009 ENSCABG00000014775 ENSCABG00000014761 FKRP (ENSCABG00000014760) STRN4 (ENSCABG00000014391) PRKD2 (ENSCABG00000014371) ENSCABG00000014369 DACT3 (ENSCABG00000014366) ##22 ENSCABG00000014361 PTGIR (ENSCABG00000014355) CALM3 (ENSCABG00000014352) PPP5C (ENSCABG00000013535) ENSCABG00000013522 SNRPD2 (ENSCABG00000013521) ENSCABG00000013520 ENSCABG00000013519 ENSCABG00000013518 DMWD (ENSCABG00000013516) SYMPK (ENSCABG00000013513) ENSCABG00000013512 IRF2BP1 (ENSCABG00000013511) ENSCABG00000013510 MYPOP (ENSCABG00000013509) Emydidae ANCESTRAL SPECIES 45 ENSGT00510000048626 ENSGT00940000163335 ENSGT00940000160719 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b.j ENSGT00970000193421.A ENSGT00940000159485.m ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183136.a.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00940000164310 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000167604.d ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00950000185426 ENSGT00940000162237 ENSGT00940000162019 ENSGT00390000007686.a ENSGT00390000017045 ENSGT00940000161740 ENSGT00950000183135.A.a Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 252 POLR2I (ENSTMTG00000006766) ENSTMTG00000006777 TBCB (ENSTMTG00000006797) ENSTMTG00000006812 ENSTMTG00000006820 ENSTMTG00000006831 ENSTMTG00000006847 ARHGAP35 (ENSTMTG00000006861) AP2S1 (ENSTMTG00000006878) ENSTMTG00000006896 ENSTMTG00000006909 FKRP (ENSTMTG00000006927) STRN4 (ENSTMTG00000006957) PRKD2 (ENSTMTG00000007272) ENSTMTG00000007750 ENSTMTG00000007764 ##22 GNG8 (ENSTMTG00000007787) PTGIR (ENSTMTG00000007799) PPP5C (ENSTMTG00000007809) HIF3A (ENSTMTG00000007833) ENSTMTG00000007849 SNRPD2 (ENSTMTG00000007862) ENSTMTG00000007873 ENSTMTG00000007894 DMWD (ENSTMTG00000007911) SYMPK (ENSTMTG00000007982) ENSTMTG00000008031 IRF2BP1 (ENSTMTG00000003331) MYPOP (ENSTMTG00000003346) NOVA2 (ENSTMTG00000003357) ENSTMTG00000003368 Three-toed box turtle MODERN SPECIES 1957 ENSTMTG00000018741 ##22 painted turtle MODERN SPECIES 879 DMWD (ENSCPBG00000007193) SYMPK (ENSCPBG00000007170) NOVA2 (ENSCPBG00000007153) NANOS2 (ENSCPBG00000007141) ENSCPBG00000007131 ENSCPBG00000007114 ENSCPBG00000007080 ENSCPBG00000007056 SLC1A5 (ENSCPBG00000007048) FKRP (ENSCPBG00000007046) STRN4 (ENSCPBG00000007025) PRKD2 (ENSCPBG00000006974) ENSCPBG00000006955 ENSCPBG00000006951 ENSCPBG00000006947 DACT3 (ENSCPBG00000006940) ##22 GNG8 (ENSCPBG00000006933) PTGIR (ENSCPBG00000006925) ENSCPBG00000006913 ENSCPBG00000006894 CHP2 (ENSCPBG00000006889) ENSCPBG00000006884 ENSCPBG00000006878 ENSCPBG00000006872 ENSCPBG00000006865 ENSCPBG00000006859 ENSCPBG00000006852 ALKBH6 (ENSCPBG00000006841) ENSCPBG00000006820 ENSCPBG00000006808 WDR62 (ENSCPBG00000006762) Lepidosauria ANCESTRAL SPECIES 58 ENSGT00940000161957 ENSGT00940000163335 ENSGT00940000160719 ENSGT00960000190608 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166445 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000167604 ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00950000185426 ENSGT00940000162237 ENSGT00940000162019 ENSGT00390000007686.a ENSGT00390000017045 ENSGT00940000166203 Episquamata ANCESTRAL SPECIES 7 ENSGT00960000190608 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166445 ENSGT00940000158785 ENSGT00940000161745.d ENSGT00940000167604 ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00940000158292.a.e ENSGT00950000185426 ENSGT00940000162237 ENSGT00940000162019 ENSGT00390000007686.a ENSGT00390000017045 Laterata ANCESTRAL SPECIES 17 ENSGT00940000159557 ENSGT00940000163335 ENSGT00940000160719 ENSGT00940000165739 ENSGT00550000075063 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166445 ENSGT00940000158785 ENSGT00940000161745.d ENSGT00940000167604 ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00570000080851 ENSGT00940000158292.a.e ENSGT00940000162237 ENSGT00940000162019 ENSGT00390000007686.a ENSGT00390000017045 Argentine black and white tegu MODERN SPECIES 59 WDR62 (ENSSMRG00000015346) ENSSMRG00000015345 POLR2I (ENSSMRG00000015344) ENSSMRG00000015343 TBCB (ENSSMRG00000015342) ENSSMRG00000015341 ENSSMRG00000015340 TMEM160 (ENSSMRG00000015339) ENSSMRG00000015338 ARHGAP35 (ENSSMRG00000015337) AP2S1 (ENSSMRG00000015336) SLC1A5 (ENSSMRG00000015335) FKRP (ENSSMRG00000015334) STRN4 (ENSSMRG00000015333) PRKD2 (ENSSMRG00000015332) DACT3 (ENSSMRG00000015331) ##22 GNG8 (ENSSMRG00000015330) PTGIR (ENSSMRG00000015328) CALM3 (ENSSMRG00000015327) ENSSMRG00000015326 PPP5C (ENSSMRG00000015324) HIF3A (ENSSMRG00000015322) ENSSMRG00000015320 SNRPD2 (ENSSMRG00000015318) ENSSMRG00000015316 ENSSMRG00000015311 SIX5 (ENSSMRG00000015310) DMPK (ENSSMRG00000015308) DMWD (ENSSMRG00000015307) SYMPK (ENSSMRG00000015301) ENSSMRG00000015300 Common wall lizard MODERN SPECIES 16 SELENOW (ENSPMRG00000008798) ENSPMRG00000008794 ENSPMRG00000008791 NOP53 (ENSPMRG00000008785) EHD2 (ENSPMRG00000008778) ENSPMRG00000008772 ENSPMRG00000008769 TMEM160 (ENSPMRG00000008765) ENSPMRG00000008759 ARHGAP35 (ENSPMRG00000008755) AP2S1 (ENSPMRG00000008748) SLC1A5 (ENSPMRG00000008739) FKRP (ENSPMRG00000008731) STRN4 (ENSPMRG00000008722) PRKD2 (ENSPMRG00000008708) DACT3 (ENSPMRG00000008698) ##22 GNG8 (ENSPMRG00000008695) PTGIR (ENSPMRG00000008692) CALM3 (ENSPMRG00000008690) ENSPMRG00000008686 PPP5C (ENSPMRG00000008661) HIF3A (ENSPMRG00000008634) ENSPMRG00000008628 ENSPMRG00000008624 ENSPMRG00000008617 ENSPMRG00000008612 ENSPMRG00000008593 ENSPMRG00000008581 #36 ENSPMRG00000008574 ENSPMRG00000008551 DMWD (ENSPMRG00000008538) Toxicofera ANCESTRAL SPECIES 22 ENSGT00940000159557 ENSGT00940000163335 ENSGT00940000160719 ENSGT00960000190608 ENSGT00940000156119 ENSGT01090000260345 ENSGT00650000093443.w.a ENSGT00390000012863 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00960000193250 ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745.d ENSGT00940000161745.c ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00570000080851 ENSGT00940000158292.a.e ENSGT00950000185426 ENSGT00940000162237 ENSGT00940000162019 ENSGT00390000007686.a ENSGT00390000017045 Elapidae ANCESTRAL SPECIES 9 ENSGT00940000159557 ENSGT00940000163335 ENSGT00940000160719 ENSGT00940000159359 ENSGT00960000190608 ENSGT00940000156119 ENSGT01090000260345 ENSGT00390000012863 ENSGT01030000234635.a.b.a.b.b.a.b.h ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00960000193250 ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745.d ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00570000080851 ENSGT00940000158292.a.e ENSGT00950000185426 ENSGT00940000162237.b ENSGT00940000162019 ENSGT00390000007686.a ENSGT00390000017045 ENSGT00940000166203 Elapidae_a ANCESTRAL SPECIES 33 ENSGT00940000159557 ENSGT00940000163335 ENSGT00940000160719 ENSGT00940000159359 ENSGT00550000075063 ENSGT00940000156119 ENSGT01090000260345 ENSGT00390000012863 ENSGT01030000234635.a.b.a.b.b.a.b.h ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00960000193250 ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745.d ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00570000080851 ENSGT00940000162237.a ENSGT00940000180177 ENSGT00940000162237.b ENSGT00940000162019 ENSGT00390000007686.a ENSGT00390000017045 ENSGT00940000166203 Acanthophiinae ANCESTRAL SPECIES 32 ENSGT00940000159557 ENSGT00940000163335 ENSGT00940000160719 ENSGT00940000159359 ENSGT00550000075063 ENSGT00940000156119 ENSGT01090000260345 ENSGT00390000012863 ENSGT01030000234635.a.b.a.b.b.a.b.h ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00960000193250 ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745.d ENSGT00390000017608 ENSGT01030000234555.a.b ENSGT00940000162237.a ENSGT00940000180177 ENSGT00390000007686.a ENSGT00390000017045 ENSGT00940000166203 ENSGT00940000162120 ENSGT00450000040421 ENSGT00940000161740 Eastern brown snake MODERN SPECIES 1177 DACT3 (ENSPTXG00000016010) ##22 Mainland tiger snake MODERN SPECIES 386 ENSNSUG00000018718 FKRP (ENSNSUG00000018719) PRKD2 (ENSNSUG00000018720) ENSNSUG00000018722 DACT3 (ENSNSUG00000018723) ##22 GNG8 (ENSNSUG00000018724) PTGIR (ENSNSUG00000018725) PPP5C (ENSNSUG00000018726) ENSNSUG00000018727 SNRPD2 (ENSNSUG00000018728) ENSNSUG00000018729 ENSNSUG00000018730 #36 SIX5 (ENSNSUG00000018731) ENSNSUG00000018732 Blue-lipped sea krait MODERN SPECIES 4756 DACT3 (ENSLLTG00000004916) ##22 Indian cobra MODERN SPECIES 11 ENSNNAG00000017001 CAPNS1 (ENSNNAG00000016820) ALKBH6 (ENSNNAG00000016788) CLIP3 (ENSNNAG00000016768) ENSNNAG00000016752 ENSNNAG00000016741 POLR2I (ENSNNAG00000016734) ENSNNAG00000016728 TBCB (ENSNNAG00000016719) ARHGAP35 (ENSNNAG00000016715) AP2S1 (ENSNNAG00000016712) SLC1A5 (ENSNNAG00000016706) FKRP (ENSNNAG00000016704) STRN4 (ENSNNAG00000016700) ENSNNAG00000016692 DACT3 (ENSNNAG00000016684) ##22 GNG8 (ENSNNAG00000016675) PTGIR (ENSNNAG00000016669) CALM3 (ENSNNAG00000016648) PPP5C (ENSNNAG00000016638) HIF3A (ENSNNAG00000016614) SNRPD2 (ENSNNAG00000016603) ENSNNAG00000016598 ENSNNAG00000016595 ENSNNAG00000016590 ENSNNAG00000016585 ENSNNAG00000016566 DMPK (ENSNNAG00000016522) DMWD (ENSNNAG00000016502) ENSNNAG00000016484 ENSNNAG00000016474 Lizard MODERN SPECIES 503 ENSACAG00000044450 ##22 Mammalia ANCESTRAL SPECIES 75 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000171396 ENSGT00940000161006 ENSGT00940000154133.B ENSGT00950000183135.A.a ENSGT00940000161740 ENSGT00860000136302 ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 ENSGT00390000017045 Theria ANCESTRAL SPECIES 27 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00860000136302 ENSGT00940000162120 ENSGT00940000162453 ENSGT00390000017045 Eutheria ANCESTRAL SPECIES 29 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a Boreoeutheria ANCESTRAL SPECIES 5 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 Laurasiatheria ANCESTRAL SPECIES 5 ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 Laurasiatheria_a ANCESTRAL SPECIES 5 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 Laurasiatheria_b ANCESTRAL SPECIES 5 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 Carnivora ANCESTRAL SPECIES 2 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b ENSGT00390000009557.B.a.a ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 Felidae ANCESTRAL SPECIES 7 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b ENSGT00390000009557.B.a.a ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 Cat MODERN SPECIES 246 DHX34 (ENSFCAG00000006144) C5AR2 (ENSFCAG00000043336) C5AR1 (ENSFCAG00000046725) CCDC9 (ENSFCAG00000004837) BBC3 (ENSFCAG00000040792) SAE1 (ENSFCAG00000027112) ZC3H4 (ENSFCAG00000004835) ENSFCAG00000032417 NPAS1 (ENSFCAG00000004833) ARHGAP35 (ENSFCAG00000004831) AP2S1 (ENSFCAG00000031554) SLC1A5 (ENSFCAG00000005736) FKRP (ENSFCAG00000024153) STRN4 (ENSFCAG00000000782) PRKD2 (ENSFCAG00000010311) DACT3 (ENSFCAG00000045800) ##22 GNG8 (ENSFCAG00000042245) PTGIR (ENSFCAG00000027533) CALM3 (ENSFCAG00000004995) ENSFCAG00000048982 CCDC8 (ENSFCAG00000042508) ENSFCAG00000032430 PNMA8A (ENSFCAG00000042861) PPP5C (ENSFCAG00000014185) HIF3A (ENSFCAG00000014181) ENSFCAG00000025239 ENSFCAG00000044207 PGLYRP1 (ENSFCAG00000028691) ENSFCAG00000051879 CCDC61 (ENSFCAG00000009510) NOVA2 (ENSFCAG00000024784) Panthera ANCESTRAL SPECIES 20 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b ENSGT00390000009557.B.a.a ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 Tiger MODERN SPECIES 36 NAPA (ENSPTIG00000012945) ENSPTIG00000012410 ENSPTIG00000011113 MEIS3 (ENSPTIG00000019415) DHX34 (ENSPTIG00000018435) C5AR1 (ENSPTIG00000000446) ENSPTIG00000016579 SAE1 (ENSPTIG00000016036) ZC3H4 (ENSPTIG00000014229) ENSPTIG00000013620 ARHGAP35 (ENSPTIG00000013260) ENSPTIG00000012880 SLC1A5 (ENSPTIG00000011531) STRN4 (ENSPTIG00000005381) PRKD2 (ENSPTIG00000018488) ENSPTIG00000017935 ##22 GNG8 (ENSPTIG00000017646) ENSPTIG00000017515 ENSPTIG00000015079 PNMA8C (ENSPTIG00000007343) ENSPTIG00000014036 Panthera_a ANCESTRAL SPECIES 22 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b ENSGT00390000009557.B.a.a ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 lion MODERN SPECIES 15 C5AR2 (ENSPLOG00000006656) C5AR1 (ENSPLOG00000006646) INAFM1 (ENSPLOG00000006630) CCDC9 (ENSPLOG00000006569) BBC3 (ENSPLOG00000006527) SAE1 (ENSPLOG00000006483) ZC3H4 (ENSPLOG00000006441) ENSPLOG00000006416 NPAS1 (ENSPLOG00000006360) ARHGAP35 (ENSPLOG00000006320) AP2S1 (ENSPLOG00000006172) ENSPLOG00000006107 FKRP (ENSPLOG00000006088) STRN4 (ENSPLOG00000006025) PRKD2 (ENSPLOG00000005850) DACT3 (ENSPLOG00000005799) ##22 GNG8 (ENSPLOG00000005773) PTGIR (ENSPLOG00000005755) CALM3 (ENSPLOG00000005689) PNMA8C (ENSPLOG00000005649) PNMA8A (ENSPLOG00000005626) PPP5C (ENSPLOG00000005583) HIF3A (ENSPLOG00000005534) ENSPLOG00000005466 ENSPLOG00000021927 PGLYRP1 (ENSPLOG00000021909) CCDC61 (ENSPLOG00000021860) NOVA2 (ENSPLOG00000021834) NANOS2 (ENSPLOG00000021823) MYPOP (ENSPLOG00000021806) IRF2BP1 (ENSPLOG00000021798) leopard MODERN SPECIES 103 C5AR1 (ENSPPRG00000015726) INAFM1 (ENSPPRG00000015681) CCDC9 (ENSPPRG00000001198) BBC3 (ENSPPRG00000000897) SAE1 (ENSPPRG00000000641) ZC3H4 (ENSPPRG00000023272) TMEM160 (ENSPPRG00000023643) NPAS1 (ENSPPRG00000023743) ARHGAP35 (ENSPPRG00000024753) AP2S1 (ENSPPRG00000022307) ENSPPRG00000019101 SLC1A5 (ENSPPRG00000017631) FKRP (ENSPPRG00000015401) STRN4 (ENSPPRG00000015890) PRKD2 (ENSPPRG00000014664) DACT3 (ENSPPRG00000015373) ##22 GNG8 (ENSPPRG00000013229) PTGIR (ENSPPRG00000013057) CALM3 (ENSPPRG00000012684) CCDC8 (ENSPPRG00000015314) PNMA8C (ENSPPRG00000015301) ENSPPRG00000010075 PPP5C (ENSPPRG00000009086) HIF3A (ENSPPRG00000008307) ENSPPRG00000006901 ENSPPRG00000006656 PGLYRP1 (ENSPPRG00000006608) CCDC61 (ENSPPRG00000006512) NOVA2 (ENSPPRG00000005941) NANOS2 (ENSPPRG00000015211) ENSPPRG00000005594 Caniformia ANCESTRAL SPECIES 1 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b ENSGT00390000009557.B.a.a ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a Caniformia_b ANCESTRAL SPECIES 2 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b ENSGT00390000009557.B.a.a ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a Mustelinae ANCESTRAL SPECIES 7 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b ENSGT00390000009557.B.a.a ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a American mink MODERN SPECIES 135 DHX34 (ENSNVIG00000010958) C5AR2 (ENSNVIG00000010949) C5AR1 (ENSNVIG00000010940) CCDC9 (ENSNVIG00000010901) ENSNVIG00000010884 SAE1 (ENSNVIG00000010826) ZC3H4 (ENSNVIG00000010804) TMEM160 (ENSNVIG00000010793) NPAS1 (ENSNVIG00000010755) ARHGAP35 (ENSNVIG00000010727) AP2S1 (ENSNVIG00000010605) SLC1A5 (ENSNVIG00000010588) FKRP (ENSNVIG00000010581) STRN4 (ENSNVIG00000010539) PRKD2 (ENSNVIG00000009771) ENSNVIG00000009748 ##22 ENSNVIG00000009739 PTGIR (ENSNVIG00000009732) CALM3 (ENSNVIG00000009664) ENSNVIG00000009652 CCDC8 (ENSNVIG00000009649) C9JTH8 (ENSNVIG00000009647) PNMA8A (ENSNVIG00000009641) PPP5C (ENSNVIG00000009605) HIF3A (ENSNVIG00000009557) ENSNVIG00000009514 ENSNVIG00000009504 PGLYRP1 (ENSNVIG00000009479) CCDC61 (ENSNVIG00000009441) NOVA2 (ENSNVIG00000009425) NANOS2 (ENSNVIG00000009419) Ferret MODERN SPECIES 291 DHX34 (ENSMPUG00000004925) C5AR2 (ENSMPUG00000019367) C5AR1 (ENSMPUG00000019368) CCDC9 (ENSMPUG00000004941) BBC3 (ENSMPUG00000004953) SAE1 (ENSMPUG00000004965) ZC3H4 (ENSMPUG00000005065) TMEM160 (ENSMPUG00000005131) NPAS1 (ENSMPUG00000005118) ARHGAP35 (ENSMPUG00000005138) AP2S1 (ENSMPUG00000005143) SLC1A5 (ENSMPUG00000005149) FKRP (ENSMPUG00000019369) STRN4 (ENSMPUG00000005157) PRKD2 (ENSMPUG00000005234) ENSMPUG00000005246 ##22 GNG8 (ENSMPUG00000005250) PTGIR (ENSMPUG00000005257) CALM3 (ENSMPUG00000005261) CCDC8 (ENSMPUG00000019370) PNMA8A (ENSMPUG00000005271) PPP5C (ENSMPUG00000005275) HIF3A (ENSMPUG00000005285) ENSMPUG00000005385 PGLYRP1 (ENSMPUG00000005395) CCDC61 (ENSMPUG00000005428) NOVA2 (ENSMPUG00000005444) NANOS2 (ENSMPUG00000019371) MYPOP (ENSMPUG00000005494) IRF2BP1 (ENSMPUG00000019372) FOXA3 (ENSMPUG00000005501) Ursidae ANCESTRAL SPECIES 30 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.d ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000164310.e ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b ENSGT00390000009557.B.a.a ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a Giant Panda MODERN SPECIES 3 KPTN (ENSAMEG00000008142) SLC8A2 (ENSAMEG00000008172) MEIS3 (ENSAMEG00000008199) DHX34 (ENSAMEG00000008270) C5AR2 (ENSAMEG00000019477) CCDC9 (ENSAMEG00000008286) BBC3 (ENSAMEG00000008310) SAE1 (ENSAMEG00000008313) ZC3H4 (ENSAMEG00000008349) TMEM160 (ENSAMEG00000028478) ARHGAP35 (ENSAMEG00000008374) ENSAMEG00000008394 SLC1A5 (ENSAMEG00000008407) STRN4 (ENSAMEG00000008435) PRKD2 (ENSAMEG00000008498) ENSAMEG00000026303 ##22 GNG8 (ENSAMEG00000008557) ENSAMEG00000008560 ENSAMEG00000029734 ENSAMEG00000024569 ENSAMEG00000024067 ENSAMEG00000029960 ENSAMEG00000008577 HIF3A (ENSAMEG00000008615) ENSAMEG00000008655 PGLYRP1 (ENSAMEG00000000626) CCDC61 (ENSAMEG00000000629) NANOS2 (ENSAMEG00000000660) ENSAMEG00000027611 MYPOP (ENSAMEG00000025217) IRF2BP1 (ENSAMEG00000029242) Ursus ANCESTRAL SPECIES 13 ENSGT00940000161057 ENSGT00990000206928 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00550000075007.d ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00950000183095.a.b.a.b.a.h.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000164310.e ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.b ENSGT00390000009557.B.a.a ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a American black bear MODERN SPECIES 2555 ENSUAMG00000016952 PRKD2 (ENSUAMG00000016933) ENSUAMG00000016924 ##22 GNG8 (ENSUAMG00000016919) PTGIR (ENSUAMG00000016918) CALM3 (ENSUAMG00000016913) Canidae ANCESTRAL SPECIES 5 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.a.a ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 Red fox MODERN SPECIES 101 C5AR2 (ENSVVUG00000023517) C5AR1 (ENSVVUG00000023518) CCDC9 (ENSVVUG00000023520) ENSVVUG00000023521 ENSVVUG00000000139 SAE1 (ENSVVUG00000000163) ZC3H4 (ENSVVUG00000000208) TMEM160 (ENSVVUG00000000280) NPAS1 (ENSVVUG00000000317) ARHGAP35 (ENSVVUG00000000350) AP2S1 (ENSVVUG00000000416) FKRP (ENSVVUG00000000452) SLC1A5 (ENSVVUG00000000475) STRN4 (ENSVVUG00000000583) PRKD2 (ENSVVUG00000002735) ENSVVUG00000002753 ##22 GNG8 (ENSVVUG00000002757) PTGIR (ENSVVUG00000002758) CALM1 (ENSVVUG00000002762) CCDC8 (ENSVVUG00000002765) PNMA8C (ENSVVUG00000002766) PNMA8A (ENSVVUG00000002767) PPP5C (ENSVVUG00000002773) HIF3A (ENSVVUG00000002779) ENSVVUG00000002866 PGLYRP1 (ENSVVUG00000002874) CCDC61 (ENSVVUG00000002894) ENSVVUG00000002971 NANOS2 (ENSVVUG00000002993) ENSVVUG00000002998 MYPOP (ENSVVUG00000003001) Canis_lupus ANCESTRAL SPECIES ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.b ENSGT00390000009557.B.a.a ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 Dingo MODERN SPECIES 125 C5AR2 (ENSCAFG00020001172) C5AR1 (ENSCAFG00020001178) INAFM1 (ENSCAFG00020001184) CCDC9 (ENSCAFG00020001196) ENSCAFG00020001204 SAE1 (ENSCAFG00020001254) ZC3H4 (ENSCAFG00020001450) ENSCAFG00020001527 ENSCAFG00020001534 ARHGAP35 (ENSCAFG00020001540) ENSCAFG00020001550 SLC1A5 (ENSCAFG00020001559) FKRP (ENSCAFG00020001564) STRN4 (ENSCAFG00020001572) PRKD2 (ENSCAFG00020001585) DACT3 (ENSCAFG00020001607) ##22 GNG8 (ENSCAFG00020001623) PTGIR (ENSCAFG00020001637) ENSCAFG00020001643 CCDC8 (ENSCAFG00020001658) PNMA8C (ENSCAFG00020001664) PNMA8A (ENSCAFG00020001670) PPP5C (ENSCAFG00020001676) HIF3A (ENSCAFG00020001684) ENSCAFG00020001697 ENSCAFG00020001734 PGLYRP1 (ENSCAFG00020001739) CCDC61 (ENSCAFG00020001761) NOVA2 (ENSCAFG00020001763) NANOS2 (ENSCAFG00020001772) ENSCAFG00020001778 Dog MODERN SPECIES C5AR1 (ENSCAFG00845002761) INAFM1 (ENSCAFG00845002784) CCDC9 (ENSCAFG00845002800) BBC3 (ENSCAFG00845002815) SAE1 (ENSCAFG00845002951) ZC3H4 (ENSCAFG00845002992) TMEM160 (ENSCAFG00845003007) ARHGAP35 (ENSCAFG00845003034) ARHGAP35 (ENSCAFG00845003086) AP2S1 (ENSCAFG00845003157) SLC1A5 (ENSCAFG00845003284) FKRP (ENSCAFG00845003332) STRN4 (ENSCAFG00845003353) PRKD2 (ENSCAFG00845003382) ENSCAFG00845003424 DACT3 (ENSCAFG00845003449) ##22 GNG8 (ENSCAFG00845003458) ENSCAFG00845004281 ENSCAFG00845004289 ENSCAFG00845004294 ENSCAFG00845004299 ENSCAFG00845004375 HIF3A (ENSCAFG00845004467) ENSCAFG00845004529 ENSCAFG00845004536 PGLYRP1 (ENSCAFG00845004551) CCDC61 (ENSCAFG00845004579) NOVA2 (ENSCAFG00845004618) NANOS2 (ENSCAFG00845004625) IRF2BP1 (ENSCAFG00845004633) FOXA3 (ENSCAFG00845004638) Laurasiatheria_c ANCESTRAL SPECIES 4 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a Chiroptera ANCESTRAL SPECIES 16 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011.c ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 Microchiroptera ANCESTRAL SPECIES 18 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007 ENSGT00940000160011.c ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.e.b.a.a.b ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 Greater horseshoe bat MODERN SPECIES 6 ENSRFEG00010013958 C5AR1 (ENSRFEG00010013939) ENSRFEG00010013918 CCDC9 (ENSRFEG00010013812) ENSRFEG00010013509 SAE1 (ENSRFEG00010013378) ZC3H4 (ENSRFEG00010013266) TMEM160 (ENSRFEG00010013212) NPAS1 (ENSRFEG00010013143) ARHGAP35 (ENSRFEG00010013104) AP2S1 (ENSRFEG00010012755) SLC1A5 (ENSRFEG00010012525) FKRP (ENSRFEG00010012506) STRN4 (ENSRFEG00010012035) PRKD2 (ENSRFEG00010011924) DACT3 (ENSRFEG00010011826) ##22 ENSRFEG00010011776 PTGIR (ENSRFEG00010011682) CALM3 (ENSRFEG00010011490) PNMA8B (ENSRFEG00010011467) PNMA8C (ENSRFEG00010011452) PPP5C (ENSRFEG00010011335) HIF3A (ENSRFEG00010010703) IGFL1 (ENSRFEG00010010615) ENSRFEG00010010556 ENSRFEG00010010514 IGFL4 (ENSRFEG00010010411) PGLYRP1 (ENSRFEG00010010376) CCDC61 (ENSRFEG00010010279) NOVA2 (ENSRFEG00010010242) NANOS2 (ENSRFEG00010010225) Equus ANCESTRAL SPECIES 1 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006.h ENSGT00390000009557.C.j ENSGT00390000009557.C.i.a ENSGT01100000263517.b.d.m.a.a.a.b ENSGT00390000009557.C.i.b ENSGT00940000161006.g Donkey MODERN SPECIES 18 INAFM1 (ENSEASG00005030427) CCDC9 (ENSEASG00005004139) ENSEASG00005035087 SAE1 (ENSEASG00005004124) ZC3H4 (ENSEASG00005004107) TMEM160 (ENSEASG00005023909) ENSEASG00005038114 ENSEASG00005004094 ENSEASG00005032745 ARHGAP35 (ENSEASG00005004087) ENSEASG00005032304 SLC1A5 (ENSEASG00005004062) FKRP (ENSEASG00005024317) STRN4 (ENSEASG00005004043) PRKD2 (ENSEASG00005004020) DACT3 (ENSEASG00005033792) ##22 ENSEASG00005004015 ENSEASG00005004013 CALM3 (ENSEASG00005004012) ENSEASG00005036842 ENSEASG00005024649 CCDC8 (ENSEASG00005031475) PNMA8C (ENSEASG00005004006) PPP5C (ENSEASG00005003995) HIF3A (ENSEASG00005003993) ENSEASG00005029977 ENSEASG00005032964 ENSEASG00005003990 ENSEASG00005003991 ENSEASG00005025557 CCDC61 (ENSEASG00005027854) Horse MODERN SPECIES 1 MEIS3 (ENSECAG00000016791) DHX34 (ENSECAG00000011354) C5AR2 (ENSECAG00000006218) C5AR1 (ENSECAG00000006153) CCDC9 (ENSECAG00000008559) ENSECAG00000031168 SAE1 (ENSECAG00000002087) ZC3H4 (ENSECAG00000024342) NPAS1 (ENSECAG00000022513) ARHGAP35 (ENSECAG00000017712) AP2S1 (ENSECAG00000016403) SLC1A5 (ENSECAG00000011637) FKRP (ENSECAG00000010652) STRN4 (ENSECAG00000002830) PRKD2 (ENSECAG00000024775) DACT3 (ENSECAG00000026972) ##22 PTGIR (ENSECAG00000023626) CALM3 (ENSECAG00000022442) ENSECAG00000060028 PNMA8A (ENSECAG00000006115) PNMA8C (ENSECAG00000034552) CCDC8 (ENSECAG00000056835) PPP5C (ENSECAG00000056298) HIF3A (ENSECAG00000020693) ENSECAG00000012503 ENSECAG00000016992 ENSECAG00000012514 ENSECAG00000029300 ENSECAG00000039739 ENSECAG00000032321 CCDC61 (ENSECAG00000009015) Artiodactyla ANCESTRAL SPECIES 5 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 Suina ANCESTRAL SPECIES 2 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT00940000170636 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 Chacoan peccary MODERN SPECIES 799 C5AR2 (ENSCWAG00000011520) C5AR1 (ENSCWAG00000011461) INAFM1 (ENSCWAG00000011443) CCDC9 (ENSCWAG00000011355) BBC3 (ENSCWAG00000011285) SAE1 (ENSCWAG00000011191) ZC3H4 (ENSCWAG00000011062) TMEM160 (ENSCWAG00000011029) NPAS1 (ENSCWAG00000010905) ARHGAP35 (ENSCWAG00000010834) AP2S1 (ENSCWAG00000010683) SLC1A5 (ENSCWAG00000010631) FKRP (ENSCWAG00000010618) STRN4 (ENSCWAG00000010545) PRKD2 (ENSCWAG00000010476) DACT3 (ENSCWAG00000010426) ##22 GNG8 (ENSCWAG00000010405) PTGIR (ENSCWAG00000010365) CALM3 (ENSCWAG00000010293) PPP5C (ENSCWAG00000010062) HIF3A (ENSCWAG00000008758) PGLYRP1 (ENSCWAG00000008579) CCDC61 (ENSCWAG00000008530) NOVA2 (ENSCWAG00000008485) NANOS2 (ENSCWAG00000008461) ENSCWAG00000008443 MYPOP (ENSCWAG00000008415) IRF2BP1 (ENSCWAG00000008392) FOXA3 (ENSCWAG00000008358) SYMPK (ENSCWAG00000008306) RSPH6A (ENSCWAG00000008233) Pig MODERN SPECIES 14 DHX34 (ENSSSCG00000003114) C5AR2 (ENSSSCG00000003113) C5AR1 (ENSSSCG00000056729) CCDC9 (ENSSSCG00000024240) BBC3 (ENSSSCG00000003112) SAE1 (ENSSSCG00000003111) ZC3H4 (ENSSSCG00000003110) TMEM160 (ENSSSCG00000003109) NPAS1 (ENSSSCG00000003108) ARHGAP35 (ENSSSCG00000003107) AP2S1 (ENSSSCG00000003106) SLC1A5 (ENSSSCG00000003105) FKRP (ENSSSCG00000003103) STRN4 (ENSSSCG00000003104) PRKD2 (ENSSSCG00000026152) DACT3 (ENSSSCG00000022280) ##22 GNG8 (ENSSSCG00000022068) PTGIR (ENSSSCG00000026602) CALM3 (ENSSSCG00000022545) CCDC8 (ENSSSCG00000033830) ENSSSCG00000003102 PPP5C (ENSSSCG00000003098) HIF3A (ENSSSCG00000003101) ENSSSCG00000046511 PGLYRP1 (ENSSSCG00000038688) CCDC61 (ENSSSCG00000003100) NOVA2 (ENSSSCG00000035029) NANOS2 (ENSSSCG00000003096) ENSSSCG00000035767 MYPOP (ENSSSCG00000038739) FOXA3 (ENSSSCG00000003092) Artiodactyla_a ANCESTRAL SPECIES 4 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 Camelidae ANCESTRAL SPECIES 15 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 Arabian camel MODERN SPECIES 35 DHX34 (ENSCDRG00005000955) C5AR2 (ENSCDRG00005000932) C5AR1 (ENSCDRG00005000922) CCDC9 (ENSCDRG00005000886) ENSCDRG00005000861 SAE1 (ENSCDRG00005000803) ZC3H4 (ENSCDRG00005000747) TMEM160 (ENSCDRG00005000726) NPAS1 (ENSCDRG00005000700) ENSCDRG00005000682 ARHGAP35 (ENSCDRG00005000613) AP2S1 (ENSCDRG00005000547) SLC1A5 (ENSCDRG00005000433) STRN4 (ENSCDRG00005000314) PRKD2 (ENSCDRG00005000229) ENSCDRG00005000209 ##22 ENSCDRG00005012438 PTGIR (ENSCDRG00005012366) CALM3 (ENSCDRG00005012287) CCDC8 (ENSCDRG00005012268) PNMA8C (ENSCDRG00005012241) PNMA8A (ENSCDRG00005012183) PPP5C (ENSCDRG00005011852) HIF3A (ENSCDRG00005011604) IGFL1 (ENSCDRG00005011529) PGLYRP1 (ENSCDRG00005011474) CCDC61 (ENSCDRG00005011347) NOVA2 (ENSCDRG00005011316) ENSCDRG00005011302 ENSCDRG00005011280 MYPOP (ENSCDRG00005011260) Alpaca MODERN SPECIES 2644 ENSVPAG00000010758 ##22 Artiodactyla_b ANCESTRAL SPECIES 4 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 Cetacea ANCESTRAL SPECIES 6 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 Odontoceti ANCESTRAL SPECIES 6 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 Odontoceti_a ANCESTRAL SPECIES 7 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a.d ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 Odontoceti_b ANCESTRAL SPECIES 5 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a.d ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 ENSGT00940000162120 Monodontidae ANCESTRAL SPECIES 3 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a.d ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 Narwhal MODERN SPECIES 296 DHX34 (ENSMMNG00015000592) C5AR2 (ENSMMNG00015000578) C5AR1 (ENSMMNG00015000571) CCDC9 (ENSMMNG00015000542) BBC3 (ENSMMNG00015000522) SAE1 (ENSMMNG00015000464) ZC3H4 (ENSMMNG00015000348) TMEM160 (ENSMMNG00015000299) NPAS1 (ENSMMNG00015000269) ARHGAP35 (ENSMMNG00015000238) AP2S1 (ENSMMNG00015000164) SLC1A5 (ENSMMNG00015000079) FKRP (ENSMMNG00015000038) STRN4 (ENSMMNG00015008395) PRKD2 (ENSMMNG00015008344) DACT3 (ENSMMNG00015008322) ##22 GNG8 (ENSMMNG00015008308) PTGIR (ENSMMNG00015008294) CALM3 (ENSMMNG00015008255) CCDC8 (ENSMMNG00015008209) PNMA8C (ENSMMNG00015008203) ENSMMNG00015008192 PPP5C (ENSMMNG00015008098) HIF3A (ENSMMNG00015007921) CCDC61 (ENSMMNG00015007871) NOVA2 (ENSMMNG00015007847) NANOS2 (ENSMMNG00015007835) ENSMMNG00015007819 MYPOP (ENSMMNG00015007811) IRF2BP1 (ENSMMNG00015007799) FOXA3 (ENSMMNG00015007790) Beluga whale MODERN SPECIES 14 C5AR2 (ENSDLEG00000003852) C5AR1 (ENSDLEG00000003857) CCDC9 (ENSDLEG00000003861) BBC3 (ENSDLEG00000003877) SAE1 (ENSDLEG00000003883) ZC3H4 (ENSDLEG00000003907) TMEM160 (ENSDLEG00000003972) ENSDLEG00000003975 ENSDLEG00000003982 ARHGAP35 (ENSDLEG00000003986) AP2S1 (ENSDLEG00000003991) SLC1A5 (ENSDLEG00000003998) FKRP (ENSDLEG00000004003) STRN4 (ENSDLEG00000004005) PRKD2 (ENSDLEG00000004024) DACT3 (ENSDLEG00000004034) ##22 GNG8 (ENSDLEG00000004040) PTGIR (ENSDLEG00000004041) CALM1 (ENSDLEG00000004044) CCDC8 (ENSDLEG00000004049) PNMA8C (ENSDLEG00000004056) PNMA8A (ENSDLEG00000004062) PPP5C (ENSDLEG00000004066) HIF3A (ENSDLEG00000004077) CCDC61 (ENSDLEG00000004090) NOVA2 (ENSDLEG00000004096) NANOS2 (ENSDLEG00000004101) ENSDLEG00000004104 MYPOP (ENSDLEG00000004110) IRF2BP1 (ENSDLEG00000004112) FOXA3 (ENSDLEG00000004115) Vaquita MODERN SPECIES 10 DHX34 (ENSPSNG00000020581) C5AR2 (ENSPSNG00000020611) C5AR1 (ENSPSNG00000020623) CCDC9 (ENSPSNG00000020676) BBC3 (ENSPSNG00000020767) SAE1 (ENSPSNG00000020821) ZC3H4 (ENSPSNG00000020937) TMEM160 (ENSPSNG00000021070) NPAS1 (ENSPSNG00000021101) ARHGAP35 (ENSPSNG00000021142) AP2S1 (ENSPSNG00000021195) SLC1A5 (ENSPSNG00000021297) FKRP (ENSPSNG00000021515) STRN4 (ENSPSNG00000021546) PRKD2 (ENSPSNG00000021606) DACT3 (ENSPSNG00000021641) ##22 GNG8 (ENSPSNG00000021667) PTGIR (ENSPSNG00000021685) CALM3 (ENSPSNG00000005927) ENSPSNG00000005987 CCDC8 (ENSPSNG00000006015) PNMA8C (ENSPSNG00000006027) PNMA8A (ENSPSNG00000006045) PPP5C (ENSPSNG00000006084) HIF3A (ENSPSNG00000006147) CCDC61 (ENSPSNG00000006217) NOVA2 (ENSPSNG00000006243) NANOS2 (ENSPSNG00000006285) MYPOP (ENSPSNG00000006305) ENSPSNG00000006334 IRF2BP1 (ENSPSNG00000006350) Sperm whale MODERN SPECIES 220 PRKD2 (ENSPCTG00005017305) DACT3 (ENSPCTG00005017502) ##22 GNG8 (ENSPCTG00005017556) PTGIR (ENSPCTG00005017587) CALM3 (ENSPCTG00005017659) Blue whale MODERN SPECIES 10 DHX34 (ENSBMSG00010020024) C5AR2 (ENSBMSG00010020050) C5AR1 (ENSBMSG00010020065) CCDC9 (ENSBMSG00010020094) BBC3 (ENSBMSG00010020342) SAE1 (ENSBMSG00010020376) ZC3H4 (ENSBMSG00010020432) TMEM160 (ENSBMSG00010020478) NPAS1 (ENSBMSG00010020493) ARHGAP35 (ENSBMSG00010020533) AP2S1 (ENSBMSG00010020580) SLC1A5 (ENSBMSG00010020761) FKRP (ENSBMSG00010020816) STRN4 (ENSBMSG00010020831) PRKD2 (ENSBMSG00010020856) DACT3 (ENSBMSG00010020888) ##22 GNG8 (ENSBMSG00010020908) PTGIR (ENSBMSG00010020919) CALM3 (ENSBMSG00010020940) CCDC8 (ENSBMSG00010020979) PNMA8A (ENSBMSG00010020996) PPP5C (ENSBMSG00010021017) HIF3A (ENSBMSG00010021058) IGFL1 (ENSBMSG00010021137) PGLYRP1 (ENSBMSG00010021143) CCDC61 (ENSBMSG00010021160) NOVA2 (ENSBMSG00010021172) NANOS2 (ENSBMSG00010014044) MYPOP (ENSBMSG00010014070) ENSBMSG00010014093 IRF2BP1 (ENSBMSG00010014111) Pecora ANCESTRAL SPECIES 4 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 ENSGT00940000162120 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 27 INAFM1 (ENSCHYG00000017434) ENSCHYG00000017388 CCDC9 (ENSCHYG00000017076) ENSCHYG00000017008 SAE1 (ENSCHYG00000016642) ZC3H4 (ENSCHYG00000016192) TMEM160 (ENSCHYG00000016093) NPAS1 (ENSCHYG00000015977) ARHGAP35 (ENSCHYG00000015852) AP2S1 (ENSCHYG00000015644) SLC1A5 (ENSCHYG00000015481) FKRP (ENSCHYG00000015463) STRN4 (ENSCHYG00000015201) PRKD2 (ENSCHYG00000015014) ENSCHYG00000014954 ##22 ENSCHYG00000014899 ##22 GNG8 (ENSCHYG00000014847) PTGIR (ENSCHYG00000014757) CALM3 (ENSCHYG00000014426) CCDC8 (ENSCHYG00000014352) ENSCHYG00000014216 PNMA8A (ENSCHYG00000014197) PPP5C (ENSCHYG00000013920) HIF3A (ENSCHYG00000013457) ENSCHYG00000013392 PGLYRP1 (ENSCHYG00000013331) ENSCHYG00000013047 NOVA2 (ENSCHYG00000013004) NANOS2 (ENSCHYG00000012987) MYPOP (ENSCHYG00000012965) IRF2BP1 (ENSCHYG00000012957) Yarkand deer MODERN SPECIES 27 C5AR1 (ENSCHYG00000017464) INAFM1 (ENSCHYG00000017434) ENSCHYG00000017388 CCDC9 (ENSCHYG00000017076) ENSCHYG00000017008 SAE1 (ENSCHYG00000016642) ZC3H4 (ENSCHYG00000016192) TMEM160 (ENSCHYG00000016093) NPAS1 (ENSCHYG00000015977) ARHGAP35 (ENSCHYG00000015852) AP2S1 (ENSCHYG00000015644) SLC1A5 (ENSCHYG00000015481) FKRP (ENSCHYG00000015463) STRN4 (ENSCHYG00000015201) PRKD2 (ENSCHYG00000015014) ENSCHYG00000014954 ##22 ENSCHYG00000014899 ##22 GNG8 (ENSCHYG00000014847) PTGIR (ENSCHYG00000014757) CALM3 (ENSCHYG00000014426) CCDC8 (ENSCHYG00000014352) ENSCHYG00000014216 PNMA8A (ENSCHYG00000014197) PPP5C (ENSCHYG00000013920) HIF3A (ENSCHYG00000013457) ENSCHYG00000013392 PGLYRP1 (ENSCHYG00000013331) ENSCHYG00000013047 NOVA2 (ENSCHYG00000013004) NANOS2 (ENSCHYG00000012987) MYPOP (ENSCHYG00000012965) Percora_a ANCESTRAL SPECIES 4 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 ENSGT00940000162120 Siberian musk deer MODERN SPECIES 124 DHX34 (ENSMMSG00000001413) C5AR2 (ENSMMSG00000001489) C5AR1 (ENSMMSG00000001497) CCDC9 (ENSMMSG00000001515) BBC3 (ENSMMSG00000001565) ENSMMSG00000001602 ZC3H4 (ENSMMSG00000001677) TMEM160 (ENSMMSG00000001690) NPAS1 (ENSMMSG00000001706) ARHGAP35 (ENSMMSG00000001730) AP2S1 (ENSMMSG00000001766) SLC1A5 (ENSMMSG00000001866) FKRP (ENSMMSG00000001899) STRN4 (ENSMMSG00000001918) PRKD2 (ENSMMSG00000002012) DACT3 (ENSMMSG00000002045) ##22 GNG8 (ENSMMSG00000002075) PTGIR (ENSMMSG00000002087) CALM3 (ENSMMSG00000002115) ENSMMSG00000002162 ENSMMSG00000002170 PPP5C (ENSMMSG00000002194) HIF3A (ENSMMSG00000002239) ENSMMSG00000002309 IGFL1 (ENSMMSG00000002324) PGLYRP1 (ENSMMSG00000002338) CCDC61 (ENSMMSG00000002366) NOVA2 (ENSMMSG00000002415) NANOS2 (ENSMMSG00000002428) ENSMMSG00000002435 MYPOP (ENSMMSG00000002452) Bovidae ANCESTRAL SPECIES 4 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 ENSGT00940000162120 Caprinae ANCESTRAL SPECIES 4 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 Rambouillet Sheep MODERN SPECIES 5 C5AR2 (ENSOARG00020012174) C5AR1 (ENSOARG00020012129) INAFM1 (ENSOARG00020012115) CCDC9 (ENSOARG00020012051) BBC3 (ENSOARG00020011954) SAE1 (ENSOARG00020011750) ZC3H4 (ENSOARG00020011583) TMEM160 (ENSOARG00020011550) NPAS1 (ENSOARG00020011377) ARHGAP35 (ENSOARG00020011291) AP2S1 (ENSOARG00020010737) SLC1A5 (ENSOARG00020010548) FKRP (ENSOARG00020010516) STRN4 (ENSOARG00020009995) PRKD2 (ENSOARG00020015155) DACT3 (ENSOARG00020015009) ##22 GNG8 (ENSOARG00020014962) PTGIR (ENSOARG00020014841) CALM2 (ENSOARG00020014681) CCDC8 (ENSOARG00020014656) PPP5C (ENSOARG00020014431) HIF3A (ENSOARG00020013117) IGFL1 (ENSOARG00020012997) PGLYRP1 (ENSOARG00020012949) CCDC61 (ENSOARG00020012803) NOVA2 (ENSOARG00020012718) NANOS2 (ENSOARG00020012700) ENSOARG00020012685 MYPOP (ENSOARG00020012637) FOXA3 (ENSOARG00020012489) SYMPK (ENSOARG00020012293) Goat MODERN SPECIES 9 C5AR1 (ENSCHIG00000016291) INAFM1 (ENSCHIG00000003153) CCDC9 (ENSCHIG00000008730) ENSCHIG00000023357 BBC3 (ENSCHIG00000010347) SAE1 (ENSCHIG00000026570) ZC3H4 (ENSCHIG00000013956) TMEM160 (ENSCHIG00000020208) NPAS1 (ENSCHIG00000006784) ARHGAP35 (ENSCHIG00000024478) AP2S1 (ENSCHIG00000022984) SLC1A5 (ENSCHIG00000020955) FKRP (ENSCHIG00000005654) STRN4 (ENSCHIG00000019269) PRKD2 (ENSCHIG00000021220) DACT3 (ENSCHIG00000021818) ##22 GNG8 (ENSCHIG00000018099) PTGIR (ENSCHIG00000016612) CALM3 (ENSCHIG00000011296) CCDC8 (ENSCHIG00000010061) ENSCHIG00000026916 PPP5C (ENSCHIG00000024557) HIF3A (ENSCHIG00000018939) IGFL1 (ENSCHIG00000023173) PGLYRP1 (ENSCHIG00000013020) CCDC61 (ENSCHIG00000024140) NOVA2 (ENSCHIG00000010547) NANOS2 (ENSCHIG00000012637) MYPOP (ENSCHIG00000019016) IRF2BP1 (ENSCHIG00000002525) FOXA3 (ENSCHIG00000011232) Bovinae ANCESTRAL SPECIES 3 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000157251.kb.b ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 American bison MODERN SPECIES 3227 KPTN (ENSBBBG00000014243) SLC8A2 (ENSBBBG00000014252) MEIS3 (ENSBBBG00000009054) DHX34 (ENSBBBG00000014324) C5AR1 (ENSBBBG00000003265) CCDC9 (ENSBBBG00000014362) BBC3 (ENSBBBG00000014369) SAE1 (ENSBBBG00000014398) ENSBBBG00000003321 ENSBBBG00000014422 ARHGAP35 (ENSBBBG00000014432) AP2S1 (ENSBBBG00000002880) SLC1A5 (ENSBBBG00000003362) STRN4 (ENSBBBG00000007553) PRKD2 (ENSBBBG00000007407) ENSBBBG00000014572 ##22 GNG8 (ENSBBBG00000007169) PTGIR (ENSBBBG00000014585) CALM3 (ENSBBBG00000014637) CCDC8 (ENSBBBG00000007256) PNMA8A (ENSBBBG00000014698) PPP5C (ENSBBBG00000014726) HIF3A (ENSBBBG00000014756) IGFL1 (ENSBBBG00000014765) ENSBBBG00000009057 PGLYRP1 (ENSBBBG00000006949) CCDC61 (ENSBBBG00000002834) NOVA2 (ENSBBBG00000014819) NANOS2 (ENSBBBG00000014825) IRF2BP1 (ENSBBBG00000014836) FOXA3 (ENSBBBG00000014845) Bos ANCESTRAL SPECIES 4 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000157251.kb.b ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 Bos_b ANCESTRAL SPECIES ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000157251.kb.b ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 Cow DUPLICATION Cow MODERN SPECIES 9 C5AR1 (ENSBTAG00000020872) INAFM1 (ENSBTAG00000053132) CCDC9 (ENSBTAG00000014117) BBC3 (ENSBTAG00000050313) SAE1 (ENSBTAG00000002676) ZC3H4 (ENSBTAG00000009286) TMEM160 (ENSBTAG00000015579) NPAS1 (ENSBTAG00000015576) ARHGAP35 (ENSBTAG00000015543) AP2S1 (ENSBTAG00000010584) SLC1A5 (ENSBTAG00000013577) FKRP (ENSBTAG00000050243) STRN4 (ENSBTAG00000005830) PRKD2 (ENSBTAG00000015599) ENSBTAG00000052862 ##22 DACT3 (ENSBTAG00000030705) ##22 GNG8 (ENSBTAG00000017762) PTGIR (ENSBTAG00000014585) CALM3 (ENSBTAG00000014583) CCDC8 (ENSBTAG00000018181) PNMA8A (ENSBTAG00000009337) PPP5C (ENSBTAG00000008014) HIF3A (ENSBTAG00000018948) IGFL1 (ENSBTAG00000000027) ENSBTAG00000023367 PGLYRP1 (ENSBTAG00000002635) CCDC61 (ENSBTAG00000005819) NOVA2 (ENSBTAG00000013157) NANOS2 (ENSBTAG00000047505) ENSBTAG00000054722 MYPOP (ENSBTAG00000045708) Cow MODERN SPECIES 9 C5AR2 (ENSBTAG00000037735) C5AR1 (ENSBTAG00000020872) INAFM1 (ENSBTAG00000053132) CCDC9 (ENSBTAG00000014117) BBC3 (ENSBTAG00000050313) SAE1 (ENSBTAG00000002676) ZC3H4 (ENSBTAG00000009286) TMEM160 (ENSBTAG00000015579) NPAS1 (ENSBTAG00000015576) ARHGAP35 (ENSBTAG00000015543) AP2S1 (ENSBTAG00000010584) SLC1A5 (ENSBTAG00000013577) FKRP (ENSBTAG00000050243) STRN4 (ENSBTAG00000005830) PRKD2 (ENSBTAG00000015599) ENSBTAG00000052862 ##22 DACT3 (ENSBTAG00000030705) ##22 GNG8 (ENSBTAG00000017762) PTGIR (ENSBTAG00000014585) CALM3 (ENSBTAG00000014583) CCDC8 (ENSBTAG00000018181) PNMA8A (ENSBTAG00000009337) PPP5C (ENSBTAG00000008014) HIF3A (ENSBTAG00000018948) IGFL1 (ENSBTAG00000000027) ENSBTAG00000023367 PGLYRP1 (ENSBTAG00000002635) CCDC61 (ENSBTAG00000005819) NOVA2 (ENSBTAG00000013157) NANOS2 (ENSBTAG00000047505) ENSBTAG00000054722 Hybrid Bos Indicus MODERN SPECIES 9 DHX34 (ENSBIXG00005004281) C5AR2 (ENSBIXG00005025135) C5AR1 (ENSBIXG00005025115) CCDC9 (ENSBIXG00005025090) BBC3 (ENSBIXG00005024989) SAE1 (ENSBIXG00005024933) ZC3H4 (ENSBIXG00005024863) ENSBIXG00005024833 NPAS1 (ENSBIXG00005024813) ARHGAP35 (ENSBIXG00005004231) AP2S1 (ENSBIXG00005024725) SLC1A5 (ENSBIXG00005024582) FKRP (ENSBIXG00005024505) STRN4 (ENSBIXG00005024484) PRKD2 (ENSBIXG00005024335) DACT3 (ENSBIXG00005024273) ##22 GNG8 (ENSBIXG00005004139) PTGIR (ENSBIXG00005024224) CALM3 (ENSBIXG00005024193) CCDC8 (ENSBIXG00005024071) PNMA8A (ENSBIXG00005023944) PPP5C (ENSBIXG00005023931) HIF3A (ENSBIXG00005023842) IGFL1 (ENSBIXG00005023661) ENSBIXG00005023638 PGLYRP1 (ENSBIXG00005023625) CCDC61 (ENSBIXG00005004038) NOVA2 (ENSBIXG00005023501) NANOS2 (ENSBIXG00005023479) MYPOP (ENSBIXG00005023469) ENSBIXG00005023453 Bos_a ANCESTRAL SPECIES 16 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00940000162120.i ENSGT00940000162453 Wild yak MODERN SPECIES 1227 DHX34 (ENSBMUG00000004684) C5AR2 (ENSBMUG00000004695) C5AR1 (ENSBMUG00000004853) INAFM1 (ENSBMUG00000004859) CCDC9 (ENSBMUG00000004872) BBC3 (ENSBMUG00000004887) SAE1 (ENSBMUG00000004945) ZC3H4 (ENSBMUG00000005069) TMEM160 (ENSBMUG00000005100) ENSBMUG00000005105 ARHGAP35 (ENSBMUG00000005114) AP2S1 (ENSBMUG00000005174) SLC1A5 (ENSBMUG00000005207) STRN4 (ENSBMUG00000005225) PRKD2 (ENSBMUG00000005252) ENSBMUG00000005284 ##22 GNG8 (ENSBMUG00000005292) PTGIR (ENSBMUG00000005300) CALM3 (ENSBMUG00000005340) ENSBMUG00000005372 CCDC8 (ENSBMUG00000005377) Domestic yak MODERN SPECIES 12 C5AR2 (ENSBGRG00000014720) C5AR1 (ENSBGRG00000014737) INAFM1 (ENSBGRG00000014787) CCDC9 (ENSBGRG00000014812) BBC3 (ENSBGRG00000015056) SAE1 (ENSBGRG00000015234) ZC3H4 (ENSBGRG00000015678) TMEM160 (ENSBGRG00000015984) NPAS1 (ENSBGRG00000016050) ARHGAP35 (ENSBGRG00000016330) ENSBGRG00000016517 SLC1A5 (ENSBGRG00000016867) FKRP (ENSBGRG00000017133) STRN4 (ENSBGRG00000017163) PRKD2 (ENSBGRG00000017664) DACT3 (ENSBGRG00000017786) ##22 GNG8 (ENSBGRG00000017906) PTGIR (ENSBGRG00000017949) CALM3 (ENSBGRG00000018002) CCDC8 (ENSBGRG00000018249) PNMA8A (ENSBGRG00000018367) PPP5C (ENSBGRG00000018431) HIF3A (ENSBGRG00000018647) IGFL1 (ENSBGRG00000019136) PGLYRP1 (ENSBGRG00000019198) CCDC61 (ENSBGRG00000019266) NOVA2 (ENSBGRG00000019401) NANOS2 (ENSBGRG00000019460) MYPOP (ENSBGRG00000019478) IRF2BP1 (ENSBGRG00000019522) FOXA3 (ENSBGRG00000019533) Euarchontoglires ANCESTRAL SPECIES 5 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a Primates ANCESTRAL SPECIES 15 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a Strepsirrhini ANCESTRAL SPECIES 16 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT00940000170636 ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 Lemuriformes ANCESTRAL SPECIES 15 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 Lemuriformes_a ANCESTRAL SPECIES 5 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 Greater bamboo lemur MODERN SPECIES 967 ARHGAP35 (ENSPSMG00000007009) AP2S1 (ENSPSMG00000006938) SLC1A5 (ENSPSMG00000006768) FKRP (ENSPSMG00000006706) STRN4 (ENSPSMG00000006556) PRKD2 (ENSPSMG00000006485) DACT3 (ENSPSMG00000006455) ##22 GNG8 (ENSPSMG00000006435) PTGIR (ENSPSMG00000006434) CALM3 (ENSPSMG00000006412) PNMA8B (ENSPSMG00000006398) PNMA8C (ENSPSMG00000006395) PNMA8A (ENSPSMG00000006391) PPP5C (ENSPSMG00000006234) HIF3A (ENSPSMG00000006129) IGFL1 (ENSPSMG00000006068) ENSPSMG00000006057 ENSPSMG00000006054 Coquerels sifaka MODERN SPECIES 568 SLC8A2 (ENSPCOG00000023795) MEIS3 (ENSPCOG00000024690) DHX34 (ENSPCOG00000027801) CCDC9 (ENSPCOG00000020816) ENSPCOG00000019970 SAE1 (ENSPCOG00000018619) ZC3H4 (ENSPCOG00000017169) TMEM160 (ENSPCOG00000028665) NPAS1 (ENSPCOG00000017882) ARHGAP35 (ENSPCOG00000015788) AP2S1 (ENSPCOG00000022192) SLC1A5 (ENSPCOG00000024625) FKRP (ENSPCOG00000008360) STRN4 (ENSPCOG00000028165) PRKD2 (ENSPCOG00000018544) DACT3 (ENSPCOG00000024045) ##22 GNG8 (ENSPCOG00000014293) PTGIR (ENSPCOG00000022780) CALM3 (ENSPCOG00000017236) PNMA8B (ENSPCOG00000020660) ENSPCOG00000021687 PNMA8A (ENSPCOG00000025636) ENSPCOG00000019586 HIF3A (ENSPCOG00000022775) IGFL1 (ENSPCOG00000013757) PGLYRP1 (ENSPCOG00000027266) CCDC61 (ENSPCOG00000024920) NOVA2 (ENSPCOG00000022693) MYPOP (ENSPCOG00000020339) IRF2BP1 (ENSPCOG00000007598) FOXA3 (ENSPCOG00000022077) Mouse lemur MODERN SPECIES 14 MEIS3 (ENSMICG00000031566) DHX34 (ENSMICG00000011585) C5AR1 (ENSMICG00000045174) CCDC9 (ENSMICG00000008823) ENSMICG00000008820 SAE1 (ENSMICG00000008807) ZC3H4 (ENSMICG00000008786) TMEM160 (ENSMICG00000035539) NPAS1 (ENSMICG00000006346) ARHGAP35 (ENSMICG00000037921) AP2S1 (ENSMICG00000038528) SLC1A5 (ENSMICG00000000030) FKRP (ENSMICG00000043598) STRN4 (ENSMICG00000015400) PRKD2 (ENSMICG00000015377) DACT3 (ENSMICG00000042964) ##22 GNG8 (ENSMICG00000011920) PTGIR (ENSMICG00000029447) CALM3 (ENSMICG00000028969) PNMA8A (ENSMICG00000008321) PPP5C (ENSMICG00000031666) HIF3A (ENSMICG00000016033) IGFL1 (ENSMICG00000028260) PGLYRP1 (ENSMICG00000033644) CCDC61 (ENSMICG00000003511) NOVA2 (ENSMICG00000028720) MYPOP (ENSMICG00000045279) IRF2BP1 (ENSMICG00000001894) FOXA3 (ENSMICG00000038321) SYMPK (ENSMICG00000001871) RSPH6A (ENSMICG00000001866) Bushbaby MODERN SPECIES 267 C5AR2 (ENSOGAG00000033946) C5AR1 (ENSOGAG00000000133) INAFM1 (ENSOGAG00000029523) CCDC9 (ENSOGAG00000015701) BBC3 (ENSOGAG00000034738) SAE1 (ENSOGAG00000007650) ZC3H4 (ENSOGAG00000031123) TMEM160 (ENSOGAG00000033520) NPAS1 (ENSOGAG00000012829) ARHGAP35 (ENSOGAG00000033334) AP2S1 (ENSOGAG00000033467) SLC1A5 (ENSOGAG00000033704) FKRP (ENSOGAG00000026248) STRN4 (ENSOGAG00000015276) PRKD2 (ENSOGAG00000007550) DACT3 (ENSOGAG00000030948) ##22 GNG8 (ENSOGAG00000029514) PTGIR (ENSOGAG00000030472) CALM3 (ENSOGAG00000014764) PNMA8B (ENSOGAG00000028036) CCDC8 (ENSOGAG00000007549) ENSOGAG00000031114 PPP5C (ENSOGAG00000015987) HIF3A (ENSOGAG00000008187) ENSOGAG00000032211 PGLYRP1 (ENSOGAG00000007305) CCDC61 (ENSOGAG00000007302) NOVA2 (ENSOGAG00000028973) NANOS2 (ENSOGAG00000032290) MYPOP (ENSOGAG00000013500) IRF2BP1 (ENSOGAG00000030584) Haplorrhini ANCESTRAL SPECIES 16 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a Simiiformes ANCESTRAL SPECIES 16 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a Catarrhini ANCESTRAL SPECIES ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.i.b ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.b ENSGT00940000155230.gd ENSGT00390000009557.A.a ENSGT00390000009557.B ENSGT00940000161006 Cercopithecidae ANCESTRAL SPECIES 12 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007.i.b ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.b ENSGT00940000155230.gd ENSGT00390000009557.A.a ENSGT00390000017625.d ENSGT00390000009557.B Cercopithecinae ANCESTRAL SPECIES 1 ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.i.b.b ENSGT00550000075007.j ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000155230.gd ENSGT00390000009557.A.a ENSGT00390000017625.d ENSGT00390000009557.B ENSGT00940000161006 Vervet Monkey MODERN SPECIES 25 C5AR2 (ENSCSAG00000019638) C5AR1 (ENSCSAG00000002973) ENSCSAG00000019637 CCDC9 (ENSCSAG00000002974) BBC3 (ENSCSAG00000002981) SAE1 (ENSCSAG00000002984) ZC3H4 (ENSCSAG00000002989) TMEM160 (ENSCSAG00000002993) NPAS1 (ENSCSAG00000003006) ARHGAP35 (ENSCSAG00000003015) ENSCSAG00000019636 ENSCSAG00000003016 FKRP (ENSCSAG00000019635) STRN4 (ENSCSAG00000003022) PRKD2 (ENSCSAG00000003028) DACT3 (ENSCSAG00000003035) ##22 GNG8 (ENSCSAG00000003040) PTGIR (ENSCSAG00000003043) CALM3 (ENSCSAG00000003050) ENSCSAG00000019634 PNMA8B (ENSCSAG00000019633) PNMA8A (ENSCSAG00000003053) CCDC8 (ENSCSAG00000019632) ENSCSAG00000019631 ENSCSAG00000019630 PPP5C (ENSCSAG00000003061) HIF3A (ENSCSAG00000003068) IGFL1 (ENSCSAG00000003071) IGFL3 (ENSCSAG00000003072) IGFL4 (ENSCSAG00000003076) PGLYRP1 (ENSCSAG00000003083) Cercopithecinae_a ANCESTRAL SPECIES 3 ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007.i.b.a ENSGT00390000002767 ENSGT00550000075007.j ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000155230.gd ENSGT00390000009557.A.a ENSGT00390000017625.d ENSGT00390000009557.B ENSGT00940000161006 Cercopithecinae_b ANCESTRAL SPECIES 23 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007.i.b.a ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000155230.gd ENSGT00390000009557.A.a ENSGT00390000017625.d ENSGT00390000009557.B ENSGT00940000161006 Olive baboon MODERN SPECIES 12 C5AR2 (ENSPANG00000038913) C5AR1 (ENSPANG00000035543) INAFM1 (ENSPANG00000044654) CCDC9 (ENSPANG00000014927) ENSPANG00000014625 ENSPANG00000005314 ZC3H4 (ENSPANG00000021115) TMEM160 (ENSPANG00000004010) NPAS1 (ENSPANG00000014704) ARHGAP35 (ENSPANG00000018862) AP2S1 (ENSPANG00000031161) SLC1A5 (ENSPANG00000024227) FKRP (ENSPANG00000003944) STRN4 (ENSPANG00000017664) PRKD2 (ENSPANG00000008367) DACT3 (ENSPANG00000021672) ##22 GNG8 (ENSPANG00000029260) PTGIR (ENSPANG00000019287) ENSPANG00000015474 PNMA8B (ENSPANG00000039504) PNMA8A (ENSPANG00000018286) PNMA8C (ENSPANG00000033741) CCDC8 (ENSPANG00000020252) ENSPANG00000029483 PPP5C (ENSPANG00000002966) HIF3A (ENSPANG00000014598) ENSPANG00000044504 ENSPANG00000039314 ENSPANG00000038110 IGFL3 (ENSPANG00000019926) PGLYRP1 (ENSPANG00000048485) Cercopithecinae_d ANCESTRAL SPECIES 9 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007.i.b.a ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.a ENSGT00390000017625.d ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B Sooty mangabey MODERN SPECIES 228 MEIS3 (ENSCATG00000044534) DHX34 (ENSCATG00000032316) C5AR1 (ENSCATG00000032999) CCDC9 (ENSCATG00000023465) ENSCATG00000044506 SAE1 (ENSCATG00000041175) ZC3H4 (ENSCATG00000039046) TMEM160 (ENSCATG00000017019) NPAS1 (ENSCATG00000044490) ARHGAP35 (ENSCATG00000025751) AP2S1 (ENSCATG00000030501) SLC1A5 (ENSCATG00000041986) FKRP (ENSCATG00000015421) STRN4 (ENSCATG00000041998) PRKD2 (ENSCATG00000012657) DACT3 (ENSCATG00000028958) ##22 GNG8 (ENSCATG00000038798) PTGIR (ENSCATG00000044691) CALM3 (ENSCATG00000036622) ENSCATG00000011877 PNMA8A (ENSCATG00000037135) PNMA8C (ENSCATG00000016093) CCDC8 (ENSCATG00000030098) ENSCATG00000021418 PPP5C (ENSCATG00000031479) HIF3A (ENSCATG00000013440) IGFL1 (ENSCATG00000040141) IGFL3 (ENSCATG00000018431) ENSCATG00000032983 IGFL4 (ENSCATG00000019969) PGLYRP1 (ENSCATG00000018338) Drill MODERN SPECIES 254 KPTN (ENSMLEG00000038643) SLC8A2 (ENSMLEG00000041982) MEIS3 (ENSMLEG00000034525) DHX34 (ENSMLEG00000041860) C5AR1 (ENSMLEG00000034392) CCDC9 (ENSMLEG00000042193) ENSMLEG00000038746 ENSMLEG00000042254 ZC3H4 (ENSMLEG00000007946) ENSMLEG00000038871 ARHGAP35 (ENSMLEG00000042586) AP2S1 (ENSMLEG00000034145) SLC1A5 (ENSMLEG00000039768) STRN4 (ENSMLEG00000039813) PRKD2 (ENSMLEG00000041161) ENSMLEG00000042860 ##22 GNG8 (ENSMLEG00000041963) PTGIR (ENSMLEG00000039111) CALM3 (ENSMLEG00000040728) ENSMLEG00000038995 PNMA8A (ENSMLEG00000037418) PNMA8C (ENSMLEG00000012922) CCDC8 (ENSMLEG00000038841) ENSMLEG00000029399 PPP5C (ENSMLEG00000043928) HIF3A (ENSMLEG00000030835) IGFL1 (ENSMLEG00000042082) Macaca ANCESTRAL SPECIES 12 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.j ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.a ENSGT00390000017625.d ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B Pig-tailed macaque MODERN SPECIES 551 MEIS3 (ENSMNEG00000045404) DHX34 (ENSMNEG00000038649) C5AR1 (ENSMNEG00000040235) CCDC9 (ENSMNEG00000029240) ENSMNEG00000009958 ENSMNEG00000024262 ZC3H4 (ENSMNEG00000039406) TMEM160 (ENSMNEG00000026327) NPAS1 (ENSMNEG00000038438) ARHGAP35 (ENSMNEG00000029940) AP2S1 (ENSMNEG00000036216) SLC1A5 (ENSMNEG00000040803) FKRP (ENSMNEG00000013306) STRN4 (ENSMNEG00000042544) PRKD2 (ENSMNEG00000038676) DACT3 (ENSMNEG00000005969) ##22 GNG8 (ENSMNEG00000029400) PTGIR (ENSMNEG00000037044) CALM3 (ENSMNEG00000038313) ENSMNEG00000035646 PNMA8A (ENSMNEG00000028579) PNMA8C (ENSMNEG00000013860) CCDC8 (ENSMNEG00000035328) ENSMNEG00000039917 PPP5C (ENSMNEG00000029801) HIF3A (ENSMNEG00000038570) IGFL1 (ENSMNEG00000040374) IGFL3 (ENSMNEG00000044243) ENSMNEG00000041271 ENSMNEG00000023075 PGLYRP1 (ENSMNEG00000011734) Macaca_a ANCESTRAL SPECIES 1 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.j ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00390000015797.c.b ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.a ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B Rhesus MODERN SPECIES 10 C5AR1 (ENSMMUG00000009278) CCDC9 (ENSMMUG00000003075) ENSMMUG00000012466 ENSMMUG00000055893 SAE1 (ENSMMUG00000009506) ZC3H4 (ENSMMUG00000014709) TMEM160 (ENSMMUG00000057454) NPAS1 (ENSMMUG00000011330) ARHGAP35 (ENSMMUG00000011332) AP2S1 (ENSMMUG00000000833) SLC1A5 (ENSMMUG00000022163) FKRP (ENSMMUG00000028743) STRN4 (ENSMMUG00000017930) PRKD2 (ENSMMUG00000017927) ENSMMUG00000051115 DACT3 (ENSMMUG00000017924) ##22 PTGIR (ENSMMUG00000017922) CALM3 (ENSMMUG00000017921) ENSMMUG00000053552 PNMA8A (ENSMMUG00000005827) PNMA8C (ENSMMUG00000061795) CCDC8 (ENSMMUG00000003190) ENSMMUG00000000218 PPP5C (ENSMMUG00000000217) HIF3A (ENSMMUG00000000215) IGFL1 (ENSMMUG00000020229) ENSMMUG00000044928 IGFL3 (ENSMMUG00000063797) ENSMMUG00000041352 PGLYRP1 (ENSMMUG00000008742) CCDC61 (ENSMMUG00000008741) Crab-eating macaque MODERN SPECIES 10 SLC8A2 (ENSMFAG00000037527) MEIS3 (ENSMFAG00000034069) C5AR2 (ENSMFAG00000064310) C5AR1 (ENSMFAG00000064601) CCDC9 (ENSMFAG00000002381) BBC3 (ENSMFAG00000033464) SAE1 (ENSMFAG00000046126) ENSMFAG00000048737 ENSMFAG00000001653 NPAS1 (ENSMFAG00000018045) ARHGAP35 (ENSMFAG00000041192) AP2S1 (ENSMFAG00000022670) SLC1A5 (ENSMFAG00000044927) STRN4 (ENSMFAG00000035843) PRKD2 (ENSMFAG00000045883) ENSMFAG00000030779 ##22 ENSMFAG00000044510 ENSMFAG00000002915 CALM3 (ENSMFAG00000036156) ENSMFAG00000035539 PNMA8A (ENSMFAG00000006014) PNMA8C (ENSMFAG00000029984) CCDC8 (ENSMFAG00000041847) ENSMFAG00000036651 PPP5C (ENSMFAG00000034179) HIF3A (ENSMFAG00000025583) ENSMFAG00000057751 IGFL3 (ENSMFAG00000003659) ENSMFAG00000001824 PGLYRP1 (ENSMFAG00000032464) CCDC61 (ENSMFAG00000035042) Rhinopithecus ANCESTRAL SPECIES 16 ENSGT00940000158721 ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007.i.b ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.B.f ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT00390000015797.c.b.d ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.b ENSGT00940000155230.gd ENSGT00390000009557.A.a ENSGT00390000017625.d Golden snub-nosed monkey MODERN SPECIES 2027 DHX34 (ENSRROG00000042872) C5AR1 (ENSRROG00000034629) INAFM1 (ENSRROG00000036821) CCDC9 (ENSRROG00000025974) ENSRROG00000040712 SAE1 (ENSRROG00000031746) ZC3H4 (ENSRROG00000032920) TMEM160 (ENSRROG00000043669) NPAS1 (ENSRROG00000043828) ARHGAP35 (ENSRROG00000035853) AP2S1 (ENSRROG00000045451) SLC1A5 (ENSRROG00000038480) FKRP (ENSRROG00000007497) STRN4 (ENSRROG00000042099) PRKD2 (ENSRROG00000034944) DACT3 (ENSRROG00000044269) ##22 ENSRROG00000045208 PTGIR (ENSRROG00000035701) CALM3 (ENSRROG00000033594) ENSRROG00000035990 PNMA8A (ENSRROG00000013610) PNMA8C (ENSRROG00000027253) ENSRROG00000038440 PPP5C (ENSRROG00000027318) HIF3A (ENSRROG00000032780) IGFL1 (ENSRROG00000029689) IGFL2 (ENSRROG00000012003) ENSRROG00000045549 IGFL3 (ENSRROG00000039749) ENSRROG00000043631 IGFL4 (ENSRROG00000043261) Black snub-nosed monkey MODERN SPECIES 477 ARHGAP35 (ENSRBIG00000030306) AP2S1 (ENSRBIG00000041720) SLC1A5 (ENSRBIG00000032793) STRN4 (ENSRBIG00000030977) PRKD2 (ENSRBIG00000002509) ENSRBIG00000037645 ##22 GNG8 (ENSRBIG00000040120) PTGIR (ENSRBIG00000039814) ENSRBIG00000040350 PNMA8B (ENSRBIG00000043852) PNMA8A (ENSRBIG00000032652) PNMA8C (ENSRBIG00000007752) ENSRBIG00000041650 PPP5C (ENSRBIG00000043486) HIF3A (ENSRBIG00000037340) IGFL1 (ENSRBIG00000041594) IGFL2 (ENSRBIG00000013672) ENSRBIG00000037692 ENSRBIG00000041617 ENSRBIG00000026369 IGFL4 (ENSRBIG00000017354) Hominoidea ANCESTRAL SPECIES ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.i.b ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.b ENSGT00940000155230.gd ENSGT00390000009557.A.a ENSGT00390000009557.B Gibbon MODERN SPECIES 7 C5AR1 (ENSNLEG00000018412) INAFM1 (ENSNLEG00000018411) CCDC9 (ENSNLEG00000002990) ENSNLEG00000018410 ENSNLEG00000002975 SAE1 (ENSNLEG00000002965) ZC3H4 (ENSNLEG00000034259) TMEM160 (ENSNLEG00000002960) NPAS1 (ENSNLEG00000002946) ARHGAP35 (ENSNLEG00000002923) AP2S1 (ENSNLEG00000002895) ENSNLEG00000029695 ENSNLEG00000035781 STRN4 (ENSNLEG00000002817) ENSNLEG00000002792 ENSNLEG00000032967 ##22 GNG8 (ENSNLEG00000002788) PTGIR (ENSNLEG00000002780) CALM3 (ENSNLEG00000002752) ENSNLEG00000002751 PNMA8B (ENSNLEG00000002750) PNMA8A (ENSNLEG00000002749) PNMA8C (ENSNLEG00000030454) ENSNLEG00000030898 ENSNLEG00000002747 PPP5C (ENSNLEG00000002629) HIF3A (ENSNLEG00000002481) IGFL1 (ENSNLEG00000002458) ENSNLEG00000002443 ENSNLEG00000032323 IGFL3 (ENSNLEG00000002440) Hominidae ANCESTRAL SPECIES ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.i.b ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.b ENSGT00940000155230.gd ENSGT00390000009557.A.a ENSGT00390000009557.B Orangutan MODERN SPECIES 10 DHX34 (ENSPPYG00000010172) C5AR2 (ENSPPYG00000010171) C5AR1 (ENSPPYG00000032120) CCDC9 (ENSPPYG00000010170) ENSPPYG00000010169 SAE1 (ENSPPYG00000010168) ZC3H4 (ENSPPYG00000010167) TMEM160 (ENSPPYG00000032917) NPAS1 (ENSPPYG00000010165) ARHGAP35 (ENSPPYG00000010164) AP2S1 (ENSPPYG00000010163) SLC1A5 (ENSPPYG00000010161) FKRP (ENSPPYG00000010160) STRN4 (ENSPPYG00000010159) PRKD2 (ENSPPYG00000010158) DACT3 (ENSPPYG00000010157) ##22 PTGIR (ENSPPYG00000010155) CALM3 (ENSPPYG00000010154) ENSPPYG00000031172 PNMA8B (ENSPPYG00000010152) PNMA8A (ENSPPYG00000035419) PNMA8C (ENSPPYG00000037781) CCDC8 (ENSPPYG00000010150) PPP5C (ENSPPYG00000010148) HIF3A (ENSPPYG00000010147) IGFL1 (ENSPPYG00000040323) ENSPPYG00000040668 IGFL3 (ENSPPYG00000010144) ENSPPYG00000029912 IGFL4 (ENSPPYG00000010142) PGLYRP1 (ENSPPYG00000010141) Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.i.b ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785.j ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.b ENSGT00940000155230.gd ENSGT00390000009557.A.a ENSGT00390000009557.B Gorilla MODERN SPECIES 10 C5AR1 (ENSGGOG00000008622) INAFM1 (ENSGGOG00000027893) CCDC9 (ENSGGOG00000015097) ENSGGOG00000040116 SAE1 (ENSGGOG00000013078) ENSGGOG00000039096 ZC3H4 (ENSGGOG00000013071) TMEM160 (ENSGGOG00000013410) NPAS1 (ENSGGOG00000013398) ARHGAP35 (ENSGGOG00000027302) ENSGGOG00000011254 SLC1A5 (ENSGGOG00000008792) FKRP (ENSGGOG00000043279) STRN4 (ENSGGOG00000010169) PRKD2 (ENSGGOG00000010508) ENSGGOG00000043507 ##22 PTGIR (ENSGGOG00000013112) CALM3 (ENSGGOG00000000212) ENSGGOG00000024504 ENSGGOG00000015668 PNMA8A (ENSGGOG00000001214) PNMA8C (ENSGGOG00000040172) CCDC8 (ENSGGOG00000016630) PPP5C (ENSGGOG00000007562) HIF3A (ENSGGOG00000007551) IGFL1 (ENSGGOG00000011461) IGFL2 (ENSGGOG00000024074) ENSGGOG00000028458 IGFL3 (ENSGGOG00000005560) IGFL4 (ENSGGOG00000027623) PGLYRP1 (ENSGGOG00000011126) Homo/Pan group ANCESTRAL SPECIES ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.i.b ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785.j ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.b ENSGT00940000155230.gd ENSGT00390000009557.A.a ENSGT00390000009557.B Human MODERN SPECIES 10 C5AR2 (ENSG00000134830) C5AR1 (ENSG00000197405) INAFM1 (ENSG00000257704) CCDC9 (ENSG00000105321) BBC3 (ENSG00000105327) SAE1 (ENSG00000142230) ZC3H4 (ENSG00000130749) TMEM160 (ENSG00000130748) NPAS1 (ENSG00000130751) ARHGAP35 (ENSG00000160007) AP2S1 (ENSG00000042753) SLC1A5 (ENSG00000105281) FKRP (ENSG00000181027) STRN4 (ENSG00000090372) PRKD2 (ENSG00000105287) DACT3 (ENSG00000197380) ##22 GNG8 (ENSG00000167414) PTGIR (ENSG00000160013) CALM3 (ENSG00000160014) PNMA8B (ENSG00000204851) PNMA8A (ENSG00000182013) PNMA8C (ENSG00000277531) CCDC8 (ENSG00000169515) PPP5C (ENSG00000011485) HIF3A (ENSG00000124440) IGFL1 (ENSG00000188293) IGFL2 (ENSG00000204866) IGFL3 (ENSG00000188624) IGFL4 (ENSG00000204869) PGLYRP1 (ENSG00000008438) CCDC61 (ENSG00000104983) Pan ANCESTRAL SPECIES 9 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007.i.b ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785.j ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.b ENSGT00940000155230.gd ENSGT00390000009557.A.a ENSGT00390000009557.B Chimpanzee MODERN SPECIES 10 C5AR2 (ENSPTRG00000041525) C5AR1 (ENSPTRG00000028958) INAFM1 (ENSPTRG00000040861) CCDC9 (ENSPTRG00000011204) BBC3 (ENSPTRG00000011203) SAE1 (ENSPTRG00000011202) ZC3H4 (ENSPTRG00000011201) TMEM160 (ENSPTRG00000011200) NPAS1 (ENSPTRG00000011199) ARHGAP35 (ENSPTRG00000011198) AP2S1 (ENSPTRG00000011197) SLC1A5 (ENSPTRG00000011194) FKRP (ENSPTRG00000050198) STRN4 (ENSPTRG00000011192) PRKD2 (ENSPTRG00000011190) DACT3 (ENSPTRG00000028961) ##22 GNG8 (ENSPTRG00000043557) PTGIR (ENSPTRG00000011186) CALM3 (ENSPTRG00000011185) PPP5D1 (ENSPTRG00000039811) ENSPTRG00000028962 PNMA8A (ENSPTRG00000011183) PNMA8C (ENSPTRG00000048654) CCDC8 (ENSPTRG00000011182) PPP5C (ENSPTRG00000011181) HIF3A (ENSPTRG00000011180) IGFL1 (ENSPTRG00000011179) IGFL2 (ENSPTRG00000041643) ENSPTRG00000050670 IGFL3 (ENSPTRG00000011176) IGFL4 (ENSPTRG00000051124) Bonobo MODERN SPECIES 10 DHX34 (ENSPPAG00000029582) C5AR2 (ENSPPAG00000023287) C5AR1 (ENSPPAG00000027323) CCDC9 (ENSPPAG00000036850) ENSPPAG00000039786 SAE1 (ENSPPAG00000032113) ZC3H4 (ENSPPAG00000037610) TMEM160 (ENSPPAG00000040416) NPAS1 (ENSPPAG00000040385) ARHGAP35 (ENSPPAG00000035858) ENSPPAG00000021619 SLC1A5 (ENSPPAG00000040539) FKRP (ENSPPAG00000037227) STRN4 (ENSPPAG00000035898) PRKD2 (ENSPPAG00000037267) ENSPPAG00000041113 ##22 GNG8 (ENSPPAG00000033557) PTGIR (ENSPPAG00000041949) CALM3 (ENSPPAG00000037613) ENSPPAG00000035628 PNMA8B (ENSPPAG00000042091) PNMA8A (ENSPPAG00000033527) PNMA8C (ENSPPAG00000008304) CCDC8 (ENSPPAG00000042195) PPP5C (ENSPPAG00000038591) HIF3A (ENSPPAG00000042427) ENSPPAG00000032796 IGFL2 (ENSPPAG00000029197) ENSPPAG00000029552 IGFL3 (ENSPPAG00000022284) IGFL4 (ENSPPAG00000040782) Platyrrhini ANCESTRAL SPECIES 20 ENSGT00940000158721 ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00710000107236 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C.c ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 Cebidae ANCESTRAL SPECIES 8 ENSGT00940000158721 ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C.c ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 Cebidae_a ANCESTRAL SPECIES 20 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C.c ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 ENSGT00390000017045 Bolivian squirrel monkey MODERN SPECIES 169 ENSSBOG00000026965 DHX34 (ENSSBOG00000026147) C5AR1 (ENSSBOG00000035229) CCDC9 (ENSSBOG00000030220) BBC3 (ENSSBOG00000022164) SAE1 (ENSSBOG00000021374) ZC3H4 (ENSSBOG00000030914) TMEM160 (ENSSBOG00000029169) NPAS1 (ENSSBOG00000033921) ARHGAP35 (ENSSBOG00000001405) AP2S1 (ENSSBOG00000032625) SLC1A5 (ENSSBOG00000030282) FKRP (ENSSBOG00000019333) STRN4 (ENSSBOG00000023134) PRKD2 (ENSSBOG00000035342) DACT3 (ENSSBOG00000033658) ##22 GNG8 (ENSSBOG00000031506) PTGIR (ENSSBOG00000035755) CALM3 (ENSSBOG00000028097) PNMA8A (ENSSBOG00000010196) PPP5C (ENSSBOG00000034724) HIF3A (ENSSBOG00000032075) ENSSBOG00000025247 ENSSBOG00000034581 IGFL1 (ENSSBOG00000027173) PGLYRP1 (ENSSBOG00000027039) CCDC61 (ENSSBOG00000032328) ENSSBOG00000001000 MYPOP (ENSSBOG00000020847) IRF2BP1 (ENSSBOG00000011517) FOXA3 (ENSSBOG00000021160) Capuchin MODERN SPECIES 266 DHX34 (ENSCCAG00000028675) C5AR1 (ENSCCAG00000035091) CCDC9 (ENSCCAG00000028908) ENSCCAG00000026596 SAE1 (ENSCCAG00000031780) ZC3H4 (ENSCCAG00000037597) TMEM160 (ENSCCAG00000031011) NPAS1 (ENSCCAG00000032406) ENSCCAG00000021097 ARHGAP35 (ENSCCAG00000022601) AP2S1 (ENSCCAG00000028431) SLC1A5 (ENSCCAG00000033717) FKRP (ENSCCAG00000015087) STRN4 (ENSCCAG00000034066) PRKD2 (ENSCCAG00000032043) DACT3 (ENSCCAG00000008006) ##22 GNG8 (ENSCCAG00000029845) PTGIR (ENSCCAG00000021110) ENSCCAG00000033630 Marmoset MODERN SPECIES 14 C5AR1 (ENSCJAG00000073054) INAFM1 (ENSCJAG00000074475) CCDC9 (ENSCJAG00000011548) ENSCJAG00000083080 SAE1 (ENSCJAG00000011565) ZC3H4 (ENSCJAG00000011601) TMEM160 (ENSCJAG00000082760) NPAS1 (ENSCJAG00000076811) ARHGAP35 (ENSCJAG00000011701) ENSCJAG00000072578 ENSCJAG00000011710 SLC1A5 (ENSCJAG00000011717) FKRP (ENSCJAG00000011741) STRN4 (ENSCJAG00000011749) PRKD2 (ENSCJAG00000047142) DACT3 (ENSCJAG00000042823) ##22 GNG8 (ENSCJAG00000011841) PTGIR (ENSCJAG00000011850) CALM3 (ENSCJAG00000078405) PNMA8B (ENSCJAG00000011875) PNMA8C (ENSCJAG00000075292) CCDC8 (ENSCJAG00000074769) PPP5C (ENSCJAG00000011891) HIF3A (ENSCJAG00000012019) ENSCJAG00000022850 IGFL1 (ENSCJAG00000012086) PGLYRP1 (ENSCJAG00000012095) CCDC61 (ENSCJAG00000012104) NOVA2 (ENSCJAG00000012121) ENSCJAG00000074719 NANOS2 (ENSCJAG00000012141) Mas night monkey MODERN SPECIES 1284 C5AR1 (ENSANAG00000031163) INAFM1 (ENSANAG00000035853) CCDC9 (ENSANAG00000020361) ENSANAG00000037922 SAE1 (ENSANAG00000023379) ZC3H4 (ENSANAG00000023963) TMEM160 (ENSANAG00000026707) NPAS1 (ENSANAG00000036771) ARHGAP35 (ENSANAG00000000237) ENSANAG00000022565 AP2S1 (ENSANAG00000024767) SLC1A5 (ENSANAG00000021437) FKRP (ENSANAG00000019314) STRN4 (ENSANAG00000032421) PRKD2 (ENSANAG00000031053) DACT3 (ENSANAG00000031822) ##22 GNG8 (ENSANAG00000023974) PTGIR (ENSANAG00000030542) CALM3 (ENSANAG00000035148) PNMA8A (ENSANAG00000029356) CCDC8 (ENSANAG00000027675) PPP5C (ENSANAG00000038336) HIF3A (ENSANAG00000036285) ENSANAG00000005209 IGFL1 (ENSANAG00000034626) PGLYRP1 (ENSANAG00000036439) CCDC61 (ENSANAG00000024615) NOVA2 (ENSANAG00000022520) MYPOP (ENSANAG00000034331) IRF2BP1 (ENSANAG00000019622) FOXA3 (ENSANAG00000036063) Euarchontoglires_A ANCESTRAL SPECIES 7 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a Glires ANCESTRAL SPECIES 6 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a Lagomorpha ANCESTRAL SPECIES 135 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00940000164310.e ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.f.a ENSGT00940000158785 Pika MODERN SPECIES 6501 DACT3 (ENSOPRG00000017315) ##22 Rabbit MODERN SPECIES 568 DHX34 (ENSOCUG00000014005) C5AR2 (ENSOCUG00000025530) C5AR1 (ENSOCUG00000022167) CCDC9 (ENSOCUG00000013560) BBC3 (ENSOCUG00000037839) SAE1 (ENSOCUG00000024320) ZC3H4 (ENSOCUG00000026069) TMEM160 (ENSOCUG00000023097) NPAS1 (ENSOCUG00000016061) ARHGAP35 (ENSOCUG00000017126) ENSOCUG00000039332 SLC1A5 (ENSOCUG00000009144) FKRP (ENSOCUG00000000122) STRN4 (ENSOCUG00000021418) PRKD2 (ENSOCUG00000026784) ENSOCUG00000030033 ##22 GNG8 (ENSOCUG00000003974) PTGIR (ENSOCUG00000026915) ENSOCUG00000037591 PNMA8A (ENSOCUG00000003756) CCDC8 (ENSOCUG00000023898) PPP5C (ENSOCUG00000021025) Rodentia ANCESTRAL SPECIES 8 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a Rodentia_A ANCESTRAL SPECIES 6 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 Sciuridae ANCESTRAL SPECIES 5 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a.j ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B.p.b.a.b.a.b ENSGT00390000009557.B.p.b.a.a ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a Eurasian red squirrel MODERN SPECIES 8 C5AR1 (ENSSVLG00005012437) ENSSVLG00005012324 CCDC9 (ENSSVLG00005012213) BBC3 (ENSSVLG00005012098) SAE1 (ENSSVLG00005011951) ZC3H4 (ENSSVLG00005011727) TMEM160 (ENSSVLG00005011672) NPAS1 (ENSSVLG00005011606) ARHGAP35 (ENSSVLG00005011555) AP2S1 (ENSSVLG00005011272) ENSSVLG00005011219 SLC1A5 (ENSSVLG00005010966) FKRP (ENSSVLG00005010926) STRN4 (ENSSVLG00005010641) PRKD2 (ENSSVLG00005010378) DACT3 (ENSSVLG00005010336) ##22 GNG8 (ENSSVLG00005010305) PTGIR (ENSSVLG00005010260) CALM3 (ENSSVLG00005025029) PNMA8A (ENSSVLG00005024983) PNMA8C (ENSSVLG00005024965) CCDC8 (ENSSVLG00005024952) PPP5C (ENSSVLG00005024922) HIF3A (ENSSVLG00005024854) IGFL1 (ENSSVLG00005024741) ENSSVLG00005024716 ENSSVLG00005024690 ENSSVLG00005024665 ENSSVLG00005024643 ENSSVLG00005024617 ENSSVLG00005024595 Marmotini ANCESTRAL SPECIES 7 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a.j ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.p.a.a ENSGT00390000009557.B.p.a.b ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 Alpin marmot MODERN SPECIES 45 MEIS3 (ENSMMMG00000013369) DHX34 (ENSMMMG00000013402) C5AR2 (ENSMMMG00000013488) C5AR1 (ENSMMMG00000013493) CCDC9 (ENSMMMG00000013499) SAE1 (ENSMMMG00000013566) ZC3H4 (ENSMMMG00000013587) ENSMMMG00000013602 NPAS1 (ENSMMMG00000013606) ARHGAP35 (ENSMMMG00000013646) AP2S1 (ENSMMMG00000013659) SLC1A5 (ENSMMMG00000013678) FKRP (ENSMMMG00000013696) STRN4 (ENSMMMG00000013698) PRKD2 (ENSMMMG00000013741) ENSMMMG00000013782 ##22 GNG8 (ENSMMMG00000013789) PTGIR (ENSMMMG00000013798) CALM3 (ENSMMMG00000013799) CCDC8 (ENSMMMG00000013809) PNMA8C (ENSMMMG00000013814) PNMA8A (ENSMMMG00000013817) PPP5C (ENSMMMG00000013822) HIF3A (ENSMMMG00000013829) ENSMMMG00000013847 ENSMMMG00000013856 ENSMMMG00000013858 IGFL4 (ENSMMMG00000013859) ENSMMMG00000013867 ENSMMMG00000013871 ENSMMMG00000013872 Marmotini_b ANCESTRAL SPECIES 22 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a.j ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.b.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.B.p.a.a ENSGT00390000009557.B.p.a.b Squirrel MODERN SPECIES 264 SLC8A2 (ENSSTOG00000020165) MEIS3 (ENSSTOG00000028182) DHX34 (ENSSTOG00000015831) C5AR2 (ENSSTOG00000023346) C5AR1 (ENSSTOG00000026678) ENSSTOG00000005813 SAE1 (ENSSTOG00000016251) ZC3H4 (ENSSTOG00000016249) TMEM160 (ENSSTOG00000024623) NPAS1 (ENSSTOG00000003396) ARHGAP35 (ENSSTOG00000011409) SLC1A5 (ENSSTOG00000028576) FKRP (ENSSTOG00000027896) STRN4 (ENSSTOG00000025660) PRKD2 (ENSSTOG00000026693) ENSSTOG00000028905 ##22 GNG8 (ENSSTOG00000024152) PTGIR (ENSSTOG00000023648) CALM3 (ENSSTOG00000014352) CCDC8 (ENSSTOG00000019897) PNMA8A (ENSSTOG00000028815) PPP5C (ENSSTOG00000021131) HIF3A (ENSSTOG00000011980) Arctic ground squirrel MODERN SPECIES 455 DHX34 (ENSUPAG00010009871) C5AR2 (ENSUPAG00010009867) C5AR1 (ENSUPAG00010009863) INAFM1 (ENSUPAG00010009857) CCDC9 (ENSUPAG00010009846) BBC3 (ENSUPAG00010009844) SAE1 (ENSUPAG00010009824) ZC3H4 (ENSUPAG00010009793) TMEM160 (ENSUPAG00010009790) NPAS1 (ENSUPAG00010009764) ARHGAP35 (ENSUPAG00010009739) AP2S1 (ENSUPAG00010009722) SLC1A5 (ENSUPAG00010009701) STRN4 (ENSUPAG00010009670) PRKD2 (ENSUPAG00010009657) DACT3 (ENSUPAG00010009628) ##22 GNG8 (ENSUPAG00010009624) PTGIR (ENSUPAG00010009623) CALM3 (ENSUPAG00010009609) CCDC8 (ENSUPAG00010009586) PNMA8C (ENSUPAG00010009585) PNMA8A (ENSUPAG00010009574) PPP5C (ENSUPAG00010009565) HIF3A (ENSUPAG00010009552) ENSUPAG00010009547 ENSUPAG00010009542 ENSUPAG00010009534 ENSUPAG00010009532 Hystricomorpha ANCESTRAL SPECIES 2 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.a ENSGT00390000007074 ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00860000136302 ENSGT00450000040421 Hystricomorpha_a ANCESTRAL SPECIES 39 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00940000167173 ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.a ENSGT00390000007074 ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 Hystricomorpha_b ANCESTRAL SPECIES 49 ENSGT00940000161057 ENSGT00940000158721 ENSGT01100000263564.a.g ENSGT00940000167173 ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.a ENSGT00390000007074 ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 ENSGT00390000017045 Degu MODERN SPECIES 238 MEIS3 (ENSODEG00000006485) DHX34 (ENSODEG00000006333) ENSODEG00000008542 ENSODEG00000009476 BBC3 (ENSODEG00000006470) ENSODEG00000006581 ZC3H4 (ENSODEG00000008320) TMEM160 (ENSODEG00000009538) NPAS1 (ENSODEG00000006878) ARHGAP35 (ENSODEG00000007178) AP2S1 (ENSODEG00000006649) SLC1A5 (ENSODEG00000007341) FKRP (ENSODEG00000019605) STRN4 (ENSODEG00000009103) PRKD2 (ENSODEG00000006559) ENSODEG00000006767 ##22 GNG8 (ENSODEG00000007360) PTGIR (ENSODEG00000007904) CALM3 (ENSODEG00000008486) PNMA8A (ENSODEG00000006429) ENSODEG00000006634 GPATCH1 (ENSODEG00000007103) PPP5C (ENSODEG00000008796) HIF3A (ENSODEG00000007136) PGLYRP1 (ENSODEG00000006980) CCDC61 (ENSODEG00000007872) NOVA2 (ENSODEG00000008485) MYPOP (ENSODEG00000006759) IRF2BP1 (ENSODEG00000019485) FOXA3 (ENSODEG00000007265) SYMPK (ENSODEG00000007519) Long-tailed chinchilla MODERN SPECIES 281 DHX34 (ENSCLAG00000000906) C5AR1 (ENSCLAG00000001064) ENSCLAG00000000680 BBC3 (ENSCLAG00000000578) SAE1 (ENSCLAG00000000507) ENSCLAG00000000483 ZC3H4 (ENSCLAG00000001032) TMEM160 (ENSCLAG00000000918) NPAS1 (ENSCLAG00000000717) ARHGAP35 (ENSCLAG00000002385) AP2S1 (ENSCLAG00000002250) ENSCLAG00000002077 FKRP (ENSCLAG00000001845) STRN4 (ENSCLAG00000001542) PRKD2 (ENSCLAG00000001395) ENSCLAG00000001276 ##22 GNG8 (ENSCLAG00000004399) PTGIR (ENSCLAG00000004207) CALM3 (ENSCLAG00000003822) ENSCLAG00000003395 ENSCLAG00000002763 PPP5C (ENSCLAG00000001548) HIF3A (ENSCLAG00000001139) PGLYRP1 (ENSCLAG00000001072) ENSCLAG00000001044 ENSCLAG00000000991 NANOS2 (ENSCLAG00000001832) MYPOP (ENSCLAG00000001704) IRF2BP1 (ENSCLAG00000001668) FOXA3 (ENSCLAG00000001661) SYMPK (ENSCLAG00000001206) Guinea pig MODERN SPECIES 80 DHX34 (ENSCPOG00000006510) C5AR2 (ENSCPOG00000010536) C5AR1 (ENSCPOG00000030913) INAFM1 (ENSCPOG00000034661) ENSCPOG00000008209 SAE1 (ENSCPOG00000021581) ZC3H4 (ENSCPOG00000036659) TMEM160 (ENSCPOG00000015280) NPAS1 (ENSCPOG00000023069) ARHGAP35 (ENSCPOG00000013236) AP2S1 (ENSCPOG00000026801) SLC1A5 (ENSCPOG00000004326) FKRP (ENSCPOG00000036590) STRN4 (ENSCPOG00000001053) PRKD2 (ENSCPOG00000003294) DACT3 (ENSCPOG00000022203) ##22 GNG8 (ENSCPOG00000031647) PTGIR (ENSCPOG00000034773) CALM3 (ENSCPOG00000029998) ENSCPOG00000027577 PNMA8A (ENSCPOG00000011877) GPATCH1 (ENSCPOG00000024477) PPP5C (ENSCPOG00000023554) HIF3A (ENSCPOG00000024199) ENSCPOG00000024181 PGLYRP1 (ENSCPOG00000032784) CCDC61 (ENSCPOG00000000061) ENSCPOG00000020582 NANOS2 (ENSCPOG00000014969) MYPOP (ENSCPOG00000012168) FOXA3 (ENSCPOG00000024661) Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 21 DHX34 (ENSHGLG00000004917) C5AR2 (ENSHGLG00000045362) C5AR1 (ENSHGLG00000005545) CCDC9 (ENSHGLG00000006240) BBC3 (ENSHGLG00000050947) SAE1 (ENSHGLG00000007950) ZC3H4 (ENSHGLG00000008600) TMEM160 (ENSHGLG00000009284) NPAS1 (ENSHGLG00000009357) ARHGAP35 (ENSHGLG00000010970) AP2S1 (ENSHGLG00000018471) SLC1A5 (ENSHGLG00000013744) FKRP (ENSHGLG00000017783) STRN4 (ENSHGLG00000015771) PRKD2 (ENSHGLG00000017425) DACT3 (ENSHGLG00000047496) ##22 ENSHGLG00000034612 ##22 PTGIR (ENSHGLG00000007145) Calm3 (ENSHGLG00000007790) ENSHGLG00000009135 PNMA8A (ENSHGLG00000013517) ENSHGLG00000009334 CCDC8 (ENSHGLG00000048973) ENSHGLG00000015987 HIF3A (ENSHGLG00000015903) ENSHGLG00000032378 PGLYRP1 (ENSHGLG00000044839) CCDC61 (ENSHGLG00000016189) NOVA2 (ENSHGLG00000016103) NANOS2 (ENSHGLG00000038379) ENSHGLG00000049227 Naked mole-rat female MODERN SPECIES 21 C5AR2 (ENSHGLG00000045362) C5AR1 (ENSHGLG00000005545) CCDC9 (ENSHGLG00000006240) BBC3 (ENSHGLG00000050947) SAE1 (ENSHGLG00000007950) ZC3H4 (ENSHGLG00000008600) TMEM160 (ENSHGLG00000009284) NPAS1 (ENSHGLG00000009357) ARHGAP35 (ENSHGLG00000010970) AP2S1 (ENSHGLG00000018471) SLC1A5 (ENSHGLG00000013744) FKRP (ENSHGLG00000017783) STRN4 (ENSHGLG00000015771) PRKD2 (ENSHGLG00000017425) DACT3 (ENSHGLG00000047496) ##22 ENSHGLG00000034612 ##22 PTGIR (ENSHGLG00000007145) Calm3 (ENSHGLG00000007790) ENSHGLG00000009135 PNMA8A (ENSHGLG00000013517) ENSHGLG00000009334 CCDC8 (ENSHGLG00000048973) ENSHGLG00000015987 HIF3A (ENSHGLG00000015903) ENSHGLG00000032378 PGLYRP1 (ENSHGLG00000044839) CCDC61 (ENSHGLG00000016189) NOVA2 (ENSHGLG00000016103) NANOS2 (ENSHGLG00000038379) ENSHGLG00000049227 MYPOP (ENSHGLG00000017201) Rodentia_B ANCESTRAL SPECIES 20 ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00940000167173 ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00860000136302 Kangaroo rat MODERN SPECIES 475 Slc8a2 (ENSDORG00000009991) Meis3 (ENSDORG00000008441) Dhx34 (ENSDORG00000008437) C5ar1 (ENSDORG00000030050) ENSDORG00000024050 ENSDORG00000029325 Sae1 (ENSDORG00000012199) Zc3h4 (ENSDORG00000002726) Tmem160 (ENSDORG00000002725) Npas1 (ENSDORG00000002722) Arhgap35 (ENSDORG00000001800) Ap2s1 (ENSDORG00000015282) Slc1a5 (ENSDORG00000008810) Strn4 (ENSDORG00000005407) Prkd2 (ENSDORG00000005405) ENSDORG00000005404 ##22 Gng8 (ENSDORG00000005403) Ptgir (ENSDORG00000005401) Calm3 (ENSDORG00000029756) Pnma8b (ENSDORG00000028483) ENSDORG00000023802 Ppp5c (ENSDORG00000004665) Hif3a (ENSDORG00000004664) Pglyrp1 (ENSDORG00000027993) Ccdc61 (ENSDORG00000010042) Nova2 (ENSDORG00000026568) Mypop (ENSDORG00000015093) Irf2bp1 (ENSDORG00000015094) Foxa3 (ENSDORG00000023140) ENSDORG00000007530 Dmwd (ENSDORG00000013780) Myomorpha ANCESTRAL SPECIES 20 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00860000136302 Muroidea ANCESTRAL SPECIES 18 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00860000136302 Muroidea_A ANCESTRAL SPECIES 20 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.a ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263479.D.a.d.b.a.a ENSGT01100000263479.D.a.d.b.a.b.a.b.a ENSGT01100000263517.b.d.m.a.a.a.b.`b ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 Cricetidae ANCESTRAL SPECIES 29 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.a ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263479.D.a.d.b.a.b.a.b.a.b.b.a ENSGT01100000263479.D.a.d.b.a.a ENSGT01100000263479.D.a.d.b.a.b.a.b.a.b.a ENSGT01100000263517.b.d.m.a.a.a.b.`b ENSGT00940000161006 ENSGT00940000154133.B Cricetidae_B ANCESTRAL SPECIES 60 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.a ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 Northern American deer mouse MODERN SPECIES Bbc3 (ENSPEMG00000014228) Sae1 (ENSPEMG00000012499) Zc3h4 (ENSPEMG00000009762) Tmem160 (ENSPEMG00000012479) Npas1 (ENSPEMG00000014696) Arhgap35 (ENSPEMG00000017349) ENSPEMG00000031358 Ceacam15 (ENSPEMG00000016683) ENSPEMG00000008534 Ceacam9 (ENSPEMG00000003127) Ap2s1 (ENSPEMG00000018089) Slc1a5 (ENSPEMG00000013763) Fkrp (ENSPEMG00000018445) Strn4 (ENSPEMG00000008347) Prkd2 (ENSPEMG00000016539) Dact3 (ENSPEMG00000016882) ##22 Gng8 (ENSPEMG00000015160) Ptgir (ENSPEMG00000016407) Calm3 (ENSPEMG00000027101) Pnma8b (ENSPEMG00000025557) Pnma8a (ENSPEMG00000006770) Ccdc8 (ENSPEMG00000012412) Ppp5c (ENSPEMG00000012984) Hif3a (ENSPEMG00000017981) Tmem86b (ENSPEMG00000028554) Ppp6r1 (ENSPEMG00000009931) Hspbp1 (ENSPEMG00000000260) Brsk1 (ENSPEMG00000013836) Tmem150b (ENSPEMG00000001799) Kmt5c (ENSPEMG00000023982) ENSPEMG00000023825 Prairie vole MODERN SPECIES 354 Dhx34 (ENSMOCG00000016843) C5ar2 (ENSMOCG00000004764) Ccdc9 (ENSMOCG00000020124) Bbc3 (ENSMOCG00000017283) ENSMOCG00000016346 Zc3h4 (ENSMOCG00000006492) Tmem160 (ENSMOCG00000016966) Npas1 (ENSMOCG00000014578) Arhgap35 (ENSMOCG00000015867) Ceacam9 (ENSMOCG00000018285) Ap2s1 (ENSMOCG00000019574) Slc1a5 (ENSMOCG00000009762) Fkrp (ENSMOCG00000022172) Strn4 (ENSMOCG00000000602) Prkd2 (ENSMOCG00000004684) Dact3 (ENSMOCG00000013361) ##22 Ptgir (ENSMOCG00000002747) Calm3 (ENSMOCG00000008052) Pnma8a (ENSMOCG00000007034) Ccdc8 (ENSMOCG00000020660) Ppp5c (ENSMOCG00000014089) Hif3a (ENSMOCG00000019473) Samd5 (ENSMOCG00000000312) Stxbp5 (ENSMOCG00000020656) Adgb (ENSMOCG00000022714) ENSMOCG00000017109 Grm1 (ENSMOCG00000014466) ENSMOCG00000012368 ENSMOCG00000000215 Fbxo30 (ENSMOCG00000020343) Epm2a (ENSMOCG00000014899) Cricetinae ANCESTRAL SPECIES 49 ENSGT00550000076229 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F.a ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263479.D.a.d.b.a.b.a.b.a.a ENSGT01100000263479.D.a.d.b.a.a ENSGT01100000263479.D.a.d.b.a.b.a.b.a.b.a.c ENSGT01100000263479.D.a.d.b.a.b.a.b.a.b.b.a Chinese hamster chok1gshd MODERN SPECIES 341 C5ar1 (ENSCGRG00001012882) Inafm1 (ENSCGRG00001010104) Ccdc9 (ENSCGRG00001007536) Bbc3 (ENSCGRG00001017224) Sae1 (ENSCGRG00001016314) Zc3h4 (ENSCGRG00001016116) Tmem160 (ENSCGRG00001014723) Npas1 (ENSCGRG00001013611) Arhgap35 (ENSCGRG00001013301) Ceacam15 (ENSCGRG00001017353) Ceacam9 (ENSCGRG00001017245) Ap2s1 (ENSCGRG00001015937) Slc1a5 (ENSCGRG00001014742) Strn4 (ENSCGRG00001002623) Prkd2 (ENSCGRG00001010601) Dact3 (ENSCGRG00001000117) ##22 Gng8 (ENSCGRG00001018981) Ptgir (ENSCGRG00001018220) Calm3 (ENSCGRG00001016779) Pnma8b (ENSCGRG00001016482) Pnma8a (ENSCGRG00001015613) Pnma8c (ENSCGRG00001014071) Ccdc8 (ENSCGRG00001014782) Ppp5c (ENSCGRG00001011160) Hif3a (ENSCGRG00001017993) ENSCGRG00001007855 ENSCGRG00001004123 ENSCGRG00001001383 ENSCGRG00001000715 ENSCGRG00001000191 ENSCGRG00001017904 Golden Hamster MODERN SPECIES 836 ENSMAUG00000003963 Bbc3 (ENSMAUG00000009202) Sae1 (ENSMAUG00000007765) ENSMAUG00000000957 Zc3h4 (ENSMAUG00000000068) Tmem160 (ENSMAUG00000000893) Npas1 (ENSMAUG00000001894) Arhgap35 (ENSMAUG00000000172) ENSMAUG00000009227 ENSMAUG00000008055 Ap2s1 (ENSMAUG00000019505) Slc1a5 (ENSMAUG00000017083) Fkrp (ENSMAUG00000018831) Strn4 (ENSMAUG00000016627) Prkd2 (ENSMAUG00000005652) ENSMAUG00000017644 ##22 Ptgir (ENSMAUG00000011407) Calm3 (ENSMAUG00000011584) Pnma8b (ENSMAUG00000016505) Pnma8c (ENSMAUG00000014466) Ppp5c (ENSMAUG00000015105) Hif3a (ENSMAUG00000011784) ENSMAUG00000012799 Zfp566 (ENSMAUG00000011017) Zfp82 (ENSMAUG00000005535) Murinae ANCESTRAL SPECIES 19 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.a ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263479.D.a.d.b.a.a.c.b ENSGT01100000263479.D.a.d.b.a.b.a.b.a.c ENSGT01100000263479.D.a.d.b.a.a.d ENSGT01100000263479.D.a.d.b.a.b.a.b.a.d ENSGT01100000263479.D.a.d.b.a.b.a.a ENSGT01100000263479.D.a.d.b.a.b.b Mus ANCESTRAL SPECIES ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.a ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263479.D.a.d.b.a.a.c.b ENSGT01100000263479.D.a.d.b.a.b.a.b.a.c ENSGT01100000263479.D.a.d.b.a.a.d ENSGT01100000263479.D.a.d.b.a.b.b ENSGT01100000263479.D.a.d.b.b ENSGT00390000009557.B Mus_A ANCESTRAL SPECIES 1 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.a ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F.c ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263479.D.a.d.b.a.a.c.b ENSGT01100000263479.D.a.d.b.a.b.a.b.a.c ENSGT01100000263479.D.a.d.b.a.a.d ENSGT01100000263479.D.a.d.b.a.b.b.d ENSGT01100000263479.D.a.d.b.a.b.b.c ENSGT01100000263479.D.a.d.b.b Mus_B ANCESTRAL SPECIES ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.a ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F.c ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263479.D.a.d.b.a.a.c.b ENSGT01100000263479.D.a.d.b.a.a.d ENSGT01100000263479.D.a.d.b.a.b.a.b.a.c ENSGT01100000263479.D.a.d.b.a.b.a.b.a.d ENSGT01100000263479.F.d ENSGT01100000263479.D.a.d.b.b.b Mouse MODERN SPECIES 16 Inafm1 (ENSMUSG00000091811) Ccdc9 (ENSMUSG00000041375) Bbc3 (ENSMUSG00000002083) Sae1 (ENSMUSG00000052833) Zc3h4 (ENSMUSG00000059273) Tmem160 (ENSMUSG00000019158) Npas1 (ENSMUSG00000001988) Arhgap35 (ENSMUSG00000058230) Ceacam15 (ENSMUSG00000078795) Ceacam9 (ENSMUSG00000007209) Ap2s1 (ENSMUSG00000008036) Slc1a5 (ENSMUSG00000001918) Fkrp (ENSMUSG00000048920) Strn4 (ENSMUSG00000030374) Prkd2 (ENSMUSG00000041187) Dact3 (ENSMUSG00000078794) ##22 Gng8 (ENSMUSG00000063594) Ptgir (ENSMUSG00000043017) Calm3 (ENSMUSG00000019370) Pnma8b (ENSMUSG00000070802) Pnma8a (ENSMUSG00000041141) Pnma8c (ENSMUSG00000108348) Ccdc8 (ENSMUSG00000041117) Ppp5c (ENSMUSG00000003099) Hif3a (ENSMUSG00000004328) Psg16 (ENSMUSG00000066760) Ceacam3 (ENSMUSG00000053228) Psg29 (ENSMUSG00000023159) Ceacam5 (ENSMUSG00000008789) Ceacam14 (ENSMUSG00000023185) Gm5155 (ENSMUSG00000078793) Mus_C ANCESTRAL SPECIES 15 ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT01100000263479.D.a.d.a.a ENSGT01100000263479.D.a.d.a.b ENSGT01100000263479.F.c ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263479.D.a.d.b.a.a.c.b ENSGT01100000263479.D.a.d.b.a.a.d ENSGT01100000263479.D.a.d.b.a.b.a.b.a.c ENSGT01100000263479.D.a.d.b.a.b.a.b.a.d ENSGT01100000263479.F.d ENSGT01100000263479.D.a.d.b.b.b spretus MODERN SPECIES 16 Inafm1 (MGP_SPRETEiJ_G0030308) Ccdc9 (MGP_SPRETEiJ_G0030309) Bbc3 (MGP_SPRETEiJ_G0030310) Sae1 (MGP_SPRETEiJ_G0030311) Zc3h4 (MGP_SPRETEiJ_G0030312) Tmem160 (MGP_SPRETEiJ_G0030313) Npas1 (MGP_SPRETEiJ_G0030314) Arhgap35 (MGP_SPRETEiJ_G0030315) Ceacam15 (MGP_SPRETEiJ_G0030316) Ceacam9 (MGP_SPRETEiJ_G0030317) Ap2s1 (MGP_SPRETEiJ_G0030318) Slc1a5 (MGP_SPRETEiJ_G0030319) Fkrp (MGP_SPRETEiJ_G0030320) Strn4 (MGP_SPRETEiJ_G0030321) Prkd2 (MGP_SPRETEiJ_G0030322) Dact3 (MGP_SPRETEiJ_G0030323) ##22 Gng8 (MGP_SPRETEiJ_G0030324) Ptgir (MGP_SPRETEiJ_G0030325) Calm3 (MGP_SPRETEiJ_G0030326) Pnma8b (MGP_SPRETEiJ_G0030327) Pnma8a (MGP_SPRETEiJ_G0030328) Ccdc8 (MGP_SPRETEiJ_G0030329) Ppp5c (MGP_SPRETEiJ_G0030330) Hif3a (MGP_SPRETEiJ_G0030331) MGP_SPRETEiJ_G0030332 Ceacam3 (MGP_SPRETEiJ_G0030333) MGP_SPRETEiJ_G0030334 MGP_SPRETEiJ_G0030335 Ceacam11 (MGP_SPRETEiJ_G0030336) Ceacam13 (MGP_SPRETEiJ_G0030337) Ceacam12 (MGP_SPRETEiJ_G0030338) Steppe mouse MODERN SPECIES 2853 Slc1a5 (ENSMSIG00000011816) Fkrp (ENSMSIG00000011810) Strn4 (ENSMSIG00000011732) Prkd2 (ENSMSIG00000011714) Dact3 (ENSMSIG00000011697) ##22 Gng8 (ENSMSIG00000011667) Ptgir (ENSMSIG00000011655) Calm3 (ENSMSIG00000011642) Pnma8b (ENSMSIG00000011625) Pnma8a (ENSMSIG00000011607) Pnma8c (ENSMSIG00000011602) ENSMSIG00000011590 Ppp5c (ENSMSIG00000011571) Hif3a (ENSMSIG00000011520) Psg16 (ENSMSIG00000011499) Ceacam3 (ENSMSIG00000011473) Psg29 (ENSMSIG00000011448) ENSMSIG00000011443 ENSMSIG00000011433 Ceacam5 (ENSMSIG00000011404) Ryukyu mouse MODERN SPECIES 16 Inafm1 (MGP_CAROLIEiJ_G0029229) Ccdc9 (MGP_CAROLIEiJ_G0029230) Bbc3 (MGP_CAROLIEiJ_G0029231) Sae1 (MGP_CAROLIEiJ_G0029232) MGP_CAROLIEiJ_G0029233 Tmem160 (MGP_CAROLIEiJ_G0029234) Npas1 (MGP_CAROLIEiJ_G0029235) Arhgap35 (MGP_CAROLIEiJ_G0029236) Ceacam15 (MGP_CAROLIEiJ_G0029237) Ceacam9 (MGP_CAROLIEiJ_G0029238) Ap2s1 (MGP_CAROLIEiJ_G0029239) Slc1a5 (MGP_CAROLIEiJ_G0029240) Fkrp (MGP_CAROLIEiJ_G0029241) Strn4 (MGP_CAROLIEiJ_G0029242) Prkd2 (MGP_CAROLIEiJ_G0029243) Dact3 (MGP_CAROLIEiJ_G0029244) ##22 Gng8 (MGP_CAROLIEiJ_G0029245) Ptgir (MGP_CAROLIEiJ_G0029246) Calm3 (MGP_CAROLIEiJ_G0029247) Pnma8b (MGP_CAROLIEiJ_G0029248) Pnma8a (MGP_CAROLIEiJ_G0029249) Ccdc8 (MGP_CAROLIEiJ_G0029250) Ppp5c (MGP_CAROLIEiJ_G0029251) Hif3a (MGP_CAROLIEiJ_G0029252) Psg16 (MGP_CAROLIEiJ_G0029253) MGP_CAROLIEiJ_G0029254 MGP_CAROLIEiJ_G0029255 MGP_CAROLIEiJ_G0029256 Igfl3 (MGP_CAROLIEiJ_G0029257) Mill1 (MGP_CAROLIEiJ_G0029258) Pglyrp1 (MGP_CAROLIEiJ_G0029259) Shrew mouse MODERN SPECIES 10 Inafm1 (MGP_PahariEiJ_G0021085) Ccdc9 (MGP_PahariEiJ_G0021086) Bbc3 (MGP_PahariEiJ_G0021087) Sae1 (MGP_PahariEiJ_G0021088) Zc3h4 (MGP_PahariEiJ_G0021089) Tmem160 (MGP_PahariEiJ_G0021090) Npas1 (MGP_PahariEiJ_G0021091) Arhgap35 (MGP_PahariEiJ_G0021092) Ceacam15 (MGP_PahariEiJ_G0021093) Ceacam9 (MGP_PahariEiJ_G0021094) Ap2s1 (MGP_PahariEiJ_G0021095) Slc1a5 (MGP_PahariEiJ_G0021096) MGP_PahariEiJ_G0021097 Strn4 (MGP_PahariEiJ_G0021098) Prkd2 (MGP_PahariEiJ_G0021099) Dact3 (MGP_PahariEiJ_G0021100) ##22 Gng8 (MGP_PahariEiJ_G0021101) Ptgir (MGP_PahariEiJ_G0021102) Calm3 (MGP_PahariEiJ_G0021103) Pnma8b (MGP_PahariEiJ_G0021104) MGP_PahariEiJ_G0021105 MGP_PahariEiJ_G0021106 Ppp5c (MGP_PahariEiJ_G0021107) Hif3a (MGP_PahariEiJ_G0021108) Psg16 (MGP_PahariEiJ_G0021109) Psg29 (MGP_PahariEiJ_G0021110) Ceacam3 (MGP_PahariEiJ_G0021111) MGP_PahariEiJ_G0021112 MGP_PahariEiJ_G0021113 Psg17 (MGP_PahariEiJ_G0021114) MGP_PahariEiJ_G0021116 Rat MODERN SPECIES Sae1 (ENSRNOG00000015128) Zc3h4 (ENSRNOG00000015229) Tmem160 (ENSRNOG00000015304) Npas1 (ENSRNOG00000015376) Arhgap35 (ENSRNOG00000015852) Gng5 (ENSRNOG00000063636) LOC102550403 (ENSRNOG00000065825) LOC108349752 (ENSRNOG00000028617) Ceacam9 (ENSRNOG00000046915) Ap2s1 (ENSRNOG00000015865) LOC679748 (ENSRNOG00000034106) Slc1a5 (ENSRNOG00000015948) Fkrp (ENSRNOG00000016055) Strn4 (ENSRNOG00000016145) Prkd2 (ENSRNOG00000016434) Dact3 (ENSRNOG00000052256) ##22 Gng8 (ENSRNOG00000016701) Ptgir (ENSRNOG00000016756) Calm3 (ENSRNOG00000016770) Pnma8b (ENSRNOG00000016863) Pnma8a (ENSRNOG00000027944) Pnma8c (ENSRNOG00000063049) Ccdc8 (ENSRNOG00000027936) Ppp5c (ENSRNOG00000016907) Hif3a (ENSRNOG00000017198) Cgm4 (ENSRNOG00000062787) Psg16 (ENSRNOG00000062379) Ceacam3 (ENSRNOG00000027607) Psgb1 (ENSRNOG00000027288) Psg29 (ENSRNOG00000029485) LOC120098290 (ENSRNOG00000034000) Upper Galilee mountains blind mole rat MODERN SPECIES 501 Ap2s1 (ENSNGAG00000005409) Slc1a5 (ENSNGAG00000011745) Fkrp (ENSNGAG00000008074) Strn4 (ENSNGAG00000015472) Prkd2 (ENSNGAG00000009795) ENSNGAG00000014192 ##22 Gng8 (ENSNGAG00000015091) Ptgir (ENSNGAG00000015456) ENSNGAG00000004089 Pnma8b (ENSNGAG00000008913) Pnma8a (ENSNGAG00000008259) Ppp5c (ENSNGAG00000012794) Hif3a (ENSNGAG00000014207) Arhgap35 (ENSNGAG00000016819) Npas1 (ENSNGAG00000018097) Tmem160 (ENSNGAG00000019488) Zc3h4 (ENSNGAG00000020090) ENSNGAG00000001209 Bbc3 (ENSNGAG00000004788) ENSNGAG00000007282 C5ar1 (ENSNGAG00000009652) Lesser Egyptian jerboa MODERN SPECIES 246 Inafm1 (ENSJJAG00000011485) Ccdc9 (ENSJJAG00000012491) Bbc3 (ENSJJAG00000016781) ENSJJAG00000017019 Zc3h4 (ENSJJAG00000019068) Tmem160 (ENSJJAG00000018203) Npas1 (ENSJJAG00000018354) Arhgap35 (ENSJJAG00000000272) Ap2s1 (ENSJJAG00000000379) ENSJJAG00000012064 Slc1a5 (ENSJJAG00000011796) Strn4 (ENSJJAG00000012202) Prkd2 (ENSJJAG00000013478) ENSJJAG00000015956 ##22 Gng8 (ENSJJAG00000016964) Ptgir (ENSJJAG00000017272) Calm3 (ENSJJAG00000017945) Pnma8b (ENSJJAG00000015410) Ppp5c (ENSJJAG00000015850) Hif3a (ENSJJAG00000017788) Atlantogenata ANCESTRAL SPECIES 48 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 Afrotheria ANCESTRAL SPECIES 22 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00940000162453 Afrotheria_a ANCESTRAL SPECIES 21 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00940000162453 Hyrax MODERN SPECIES 6852 STRN4 (ENSPCAG00000006381) ENSPCAG00000006262 DACT3 (ENSPCAG00000006216) ##22 Elephant MODERN SPECIES 375 KPTN (ENSLAFG00000009281) MEIS3 (ENSLAFG00000031905) DHX34 (ENSLAFG00000003186) C5AR1 (ENSLAFG00000023333) CCDC9 (ENSLAFG00000026191) BBC3 (ENSLAFG00000008852) SAE1 (ENSLAFG00000001593) ZC3H4 (ENSLAFG00000001586) TMEM160 (ENSLAFG00000014543) ARHGAP35 (ENSLAFG00000018311) ENSLAFG00000026512 SLC1A5 (ENSLAFG00000000671) FKRP (ENSLAFG00000025662) STRN4 (ENSLAFG00000004220) PRKD2 (ENSLAFG00000021718) DACT3 (ENSLAFG00000000449) ##22 PTGIR (ENSLAFG00000021881) CALM3 (ENSLAFG00000001155) ENSLAFG00000009288 ENSLAFG00000029507 ENSLAFG00000030061 CCDC8 (ENSLAFG00000003049) PPP5C (ENSLAFG00000006728) HIF3A (ENSLAFG00000017230) IGFL1 (ENSLAFG00000030746) ENSLAFG00000028836 ENSLAFG00000028116 ENSLAFG00000027748 ENSLAFG00000022007 IGFL4 (ENSLAFG00000001349) ENSLAFG00000011331 Xenarthra ANCESTRAL SPECIES 1433 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 Armadillo MODERN SPECIES 1152 ENSDNOG00000043106 ENSDNOG00000031569 PRKD2 (ENSDNOG00000001222) ENSDNOG00000036755 ##22 Marsupialia ANCESTRAL SPECIES 20 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263534.b.k.a.a.b.a.c.a.b ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00860000136302 ENSGT00940000162120 ENSGT00940000162453 Marsupialia_b ANCESTRAL SPECIES 4 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263534.b.k.a.a.b.a.c.a.b ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00860000136302 ENSGT00940000162120 ENSGT00940000162453 Diprotodontia ANCESTRAL SPECIES 58 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263534.b.k.a.a.b.a.c.a.b ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00860000136302 ENSGT00940000162120 ENSGT00940000162453 Diprotodontia_a ANCESTRAL SPECIES 56 ENSGT00940000158721 ENSGT01100000263564.a.h ENSGT01100000263564.a.g ENSGT00530000063950.a.b ENSGT00390000002767 ENSGT00550000075007 ENSGT00940000160011 ENSGT00390000012863 ENSGT00940000161295 ENSGT01030000234635.a.b.a.b.b.a.b ENSGT00970000193421.A ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ##22 ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000158785 ENSGT00940000161745 ENSGT01100000263534.b.k.a.a.b.a.c.a.b ENSGT00940000161006 ENSGT00940000171396 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00860000136302 ENSGT00940000162120 ENSGT00940000162453 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1158 DHX34 (ENSVURG00010022703) C5AR2 (ENSVURG00010022700) ENSVURG00010022698 CCDC9 (ENSVURG00010022694) ENSVURG00010022689 ENSVURG00010022683 ENSVURG00010022671 ENSVURG00010022668 ENSVURG00010022660 ENSVURG00010022649 ENSVURG00010022632 ENSVURG00010022289 ENSVURG00010022272 ENSVURG00010022263 ENSVURG00010021751 ENSVURG00010021686 ##22 ENSVURG00010021679 ENSVURG00010021676 ENSVURG00010021665 ENSVURG00010021653 ENSVURG00010021638 ENSVURG00010021566 ENSVURG00010021545 ENSVURG00010021540 ENSVURG00010021538 ENSVURG00010021533 ENSVURG00010021526 ENSVURG00010021522 ENSVURG00010021516 ENSVURG00010021512 ENSVURG00010021509 Common wonbat MODERN SPECIES 1158 ENSVURG00010011397 ENSVURG00010011360 ENSVURG00010011344 ENSVURG00010011325 ENSVURG00010011318 ENSVURG00010011314 ENSVURG00010010368 ENSVURG00010010327 ENSVURG00010007823 ENSVURG00010006016 ENSVURG00010005880 ##22 ENSVURG00010005864 ENSVURG00010005861 ENSVURG00010005854 ENSVURG00010004809 ENSVURG00010004727 ENSVURG00010004291 ENSVURG00010004245 ENSVURG00010004241 ENSVURG00010004231 ENSVURG00010004226 ENSVURG00010004223 ENSVURG00010004212 ENSVURG00010004210 ENSVURG00010004203 ENSVURG00010004196 koala MODERN SPECIES 345 DHX34 (ENSPCIG00000000889) ENSPCIG00000000869 C5AR1 (ENSPCIG00000000822) CCDC9 (ENSPCIG00000028131) ENSPCIG00000028133 SAE1 (ENSPCIG00000028135) ZC3H4 (ENSPCIG00000028138) TMEM160 (ENSPCIG00000028139) NPAS1 (ENSPCIG00000032390) ARHGAP35 (ENSPCIG00000025775) ENSPCIG00000025776 SLC1A5 (ENSPCIG00000025777) FKRP (ENSPCIG00000025778) STRN4 (ENSPCIG00000025779) PRKD2 (ENSPCIG00000025780) DACT3 (ENSPCIG00000009348) ##22 GNG8 (ENSPCIG00000009350) PTGIR (ENSPCIG00000009351) CALM3 (ENSPCIG00000009353) PPP5C (ENSPCIG00000006141) HIF3A (ENSPCIG00000006138) ENSPCIG00000009955 ENSPCIG00000023945 Tasmanian devil MODERN SPECIES 2 ENSSHAG00000024846 MEIS3 (ENSSHAG00000021311) ENSSHAG00000030420 ENSSHAG00000029825 C5AR2 (ENSSHAG00000027588) ENSSHAG00000001420 SAE1 (ENSSHAG00000002813) ZC3H4 (ENSSHAG00000028166) NPAS1 (ENSSHAG00000024261) ARHGAP35 (ENSSHAG00000006639) AP2S1 (ENSSHAG00000026500) SLC1A5 (ENSSHAG00000026042) PRKD2 (ENSSHAG00000021404) ENSSHAG00000025928 ENSSHAG00000020505 DACT3 (ENSSHAG00000031611) ##22 ENSSHAG00000030771 ENSSHAG00000028119 ENSSHAG00000004128 ENSSHAG00000003533 ENSSHAG00000024489 ENSSHAG00000025662 ENSSHAG00000028193 ENSSHAG00000022799 ENSSHAG00000016613 ENSSHAG00000023061 ENSSHAG00000029336 ENSSHAG00000021410 ENSSHAG00000027850 ENSSHAG00000016916 CCDC61 (ENSSHAG00000023008) Opossum MODERN SPECIES 3 SELENOW (ENSMODG00000023715) DHX34 (ENSMODG00000008850) C5AR2 (ENSMODG00000007252) ENSMODG00000008857 CCDC9 (ENSMODG00000008926) ENSMODG00000008934 SAE1 (ENSMODG00000008952) ZC3H4 (ENSMODG00000008978) TMEM160 (ENSMODG00000047936) NPAS1 (ENSMODG00000009053) ARHGAP35 (ENSMODG00000009066) AP2S1 (ENSMODG00000009083) SLC1A5 (ENSMODG00000009108) FKRP (ENSMODG00000023714) STRN4 (ENSMODG00000009136) DACT3 (ENSMODG00000047059) ##22 GNG8 (ENSMODG00000009206) PTGIR (ENSMODG00000009211) ENSMODG00000009222 PPP5C (ENSMODG00000009228) ENSMODG00000021137 ENSMODG00000006074 ENSMODG00000002676 ENSMODG00000002387 ENSMODG00000028671 ENSMODG00000002366 ENSMODG00000023690 ACTRT2 (ENSMODG00000019054) ENSMODG00000027415 ENSMODG00000042138 ENSMODG00000047990 Platypus MODERN SPECIES 16 SAE1 (ENSOANG00000004331) ENSOANG00000039018 CCDC9 (ENSOANG00000049974) ENSOANG00000012979 ENSOANG00000037837 DHX34 (ENSOANG00000000569) ENSOANG00000037686 TMEM160 (ENSOANG00000048641) ENSOANG00000040596 ARHGAP35 (ENSOANG00000003425) AP2S1 (ENSOANG00000047764) SLC1A5 (ENSOANG00000048663) FKRP (ENSOANG00000039322) STRN4 (ENSOANG00000049730) PRKD2 (ENSOANG00000049147) ENSOANG00000046092 ##22 ENSOANG00000041777 ENSOANG00000049385 ENSOANG00000036554 PPP5C (ENSOANG00000011946) ENSOANG00000038949 ENSOANG00000049441 NOVA2 (ENSOANG00000040576) ENSOANG00000042668 FOXA3 (ENSOANG00000042207) SYMPK (ENSOANG00000036849) ENSOANG00000042786 DMWD (ENSOANG00000037436) ENSOANG00000028407 ENSOANG00000050748 ENSOANG00000014943 Coelacanth MODERN SPECIES 1838 ENSLACG00000001519 ENSLACG00000002025 ENSLACG00000004140 ENSLACG00000004563 ENSLACG00000009485 ##22 Actinopterygii ANCESTRAL SPECIES 773 ENSGT00940000180218 ENSGT00950000183181.B.b ##22 ENSGT01100000263564.a Reedfish MODERN SPECIES enkd1 (ENSECRG00000000104) kcnk6 (ENSECRG00000000103) ENSECRG00000000102 ENSECRG00000000101 ENSECRG00000000100 ENSECRG00000000099 SHKBP1 (ENSECRG00000000098) ENSECRG00000000097 SPTBN4 (ENSECRG00000000096) blvrb (ENSECRG00000000095) ENSECRG00000000094 ENSECRG00000000093 ENSECRG00000000092 ENSECRG00000000091 ENSECRG00000000090 ENSECRG00000000089 ##22 ENSECRG00000000088 ENSECRG00000000087 ENSECRG00000000086 ENSECRG00000000085 ENSECRG00000000084 ENSECRG00000000083 ENSECRG00000000082 clasrp (ENSECRG00000000081) ENSECRG00000000080 snrpa (ENSECRG00000000079) zgc:153119 (ENSECRG00000000078) itpkcb (ENSECRG00000000077) ENSECRG00000000076 fbxo46 (ENSECRG00000000075) coq8b (ENSECRG00000000074) Neopterygii ANCESTRAL SPECIES 77 ENSGT00940000159610 ENSGT00940000160281 ENSGT00940000161057 ENSGT00940000154866.A ENSGT00940000157514.a ENSGT00390000002548 ENSGT00940000160500 ENSGT00390000017267 ENSGT01090000260005.a.b.a.b.b ENSGT00940000159120.e ENSGT00550000074807.c ENSGT00390000001278.a ENSGT00940000153792.A ENSGT00940000156265 ENSGT00940000180218 ENSGT00950000183181.B.b ##22 ENSGT01100000263564.a ENSGT01030000234517.F ENSGT00530000064222.a ENSGT00940000158965 ENSGT00940000160957 ENSGT00940000165302 ENSGT00940000160692 Spotted gar MODERN SPECIES 658 ENSLOCG00000017568 ENSLOCG00000014586 ENSLOCG00000014580 yif1b (ENSLOCG00000014575) blvrb (ENSLOCG00000014574) SPTBN4 (ENSLOCG00000014564) SHKBP1 (ENSLOCG00000014556) ENSLOCG00000014553 ENSLOCG00000014544 ENSLOCG00000014542 ENSLOCG00000017567 ENSLOCG00000014537 kcnk6 (ENSLOCG00000014534) eef1g (ENSLOCG00000014527) ENSLOCG00000014524 ENSLOCG00000014520 ##22 C5AR2 (ENSLOCG00000017566) ENSLOCG00000014516 fbxo46 (ENSLOCG00000017565) coq8b (ENSLOCG00000014507) ENSLOCG00000014504 ENSLOCG00000014497 ENSLOCG00000014492 gabarapa (ENSLOCG00000014491) ctdnep1b (ENSLOCG00000014490) elp5 (ENSLOCG00000014484) phf23b (ENSLOCG00000014481) plscr3b (ENSLOCG00000014476) tnk1 (ENSLOCG00000014472) senp3a (ENSLOCG00000014470) eif4a1a (ENSLOCG00000014465) Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000183181.B.b.k ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000183181.B.b.k ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000183181.B.b.k ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT00950000183181.B.b.k ##22 Cod MODERN SPECIES 18 ankrd9 (ENSGMOG00000030360) rcor1 (ENSGMOG00000014282) traf3 (ENSGMOG00000014251) snx6 (ENSGMOG00000014508) ENSGMOG00000014535 ENSGMOG00000014544 sec23a (ENSGMOG00000000840) ENSGMOG00000011391 zgc:109986 (ENSGMOG00000000292) ENSGMOG00000033797 ENSGMOG00000029248 psma3 (ENSGMOG00000015528) #17 arid4a (ENSGMOG00000017334) #18 timm9 (ENSGMOG00000034176) #20 ENSGMOG00000034353 ENSGMOG00000032753 ##22 lgals3b (ENSGMOG00000025396) atg14 (ENSGMOG00000028864) tbpl2 (ENSGMOG00000004886) jmjd7 (ENSGMOG00000004910) ENSGMOG00000027362 ENSGMOG00000007697 ENSGMOG00000023984 tyro3 (ENSGMOG00000013831) ENSGMOG00000006518 ENSGMOG00000006507 ENSGMOG00000031559 ENSGMOG00000014294 ENSGMOG00000006936 ENSGMOG00000022996 HEATR5A (ENSGMOG00000033228) Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 73 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F ENSGT00550000075063 ENSGT00940000159359 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 113 ENSGT00390000018633 ENSGT00940000156655 ENSGT00390000010215.B.o ENSGT00550000074936 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.b ENSGT00940000157126.f ENSGT00940000159663.b ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a.a ##22 ENSGT01030000234517.F.i ENSGT00550000075063 ENSGT00940000159359 P. kingsleyae MODERN SPECIES 208 ENSPKIG00000024005 ENSPKIG00000024018 il13ra2 (ENSPKIG00000024035) st3gal4 (ENSPKIG00000024051) KCNJ5 (ENSPKIG00000024064) kcnj1b (ENSPKIG00000024075) FLI1 (ENSPKIG00000000505) ETS1 (ENSPKIG00000000540) smtlb (ENSPKIG00000000662) ENSPKIG00000000777 KIRREL3 (ENSPKIG00000000821) ENSPKIG00000000884 smfn (ENSPKIG00000000911) ENSPKIG00000000967 GRAMD1B (ENSPKIG00000000987) DACT3 (ENSPKIG00000001031) ##22 ENSPKIG00000001053 polr2i (ENSPKIG00000001086) ENSPKIG00000001097 snrpd2 (ENSPKIG00000001110) vaspa (ENSPKIG00000001134) AKT2 (ENSPKIG00000001179) ENSPKIG00000001216 NHLRC3 (ENSPKIG00000001271) ENSPKIG00000001324 foxo1b (ENSPKIG00000001340) mrps31 (ENSPKIG00000001361) slc25a15b (ENSPKIG00000001396) tm4sf21a (ENSPKIG00000001417) mpdu1a (ENSPKIG00000001430) sox19a (ENSPKIG00000001452) Asian bonytongue MODERN SPECIES 17 FAM118B (ENSSFOG00015022227) foxred1 (ENSSFOG00015024918) cry5 (ENSSFOG00015022247) dcps (ENSSFOG00015022277) st3gal4 (ENSSFOG00015022295) KCNJ5 (ENSSFOG00015022315) kcnj1b (ENSSFOG00015022320) FLI1 (ENSSFOG00015030553) ETS1 (ENSSFOG00015022341) smtlb (ENSSFOG00015022359) KIRREL3 (ENSSFOG00015008552) ENSSFOG00015022406 smfn (ENSSFOG00015022414) ENSSFOG00015033137 GRAMD1B (ENSSFOG00015022451) ENSSFOG00015022505 ##22 ENSSFOG00015022515 polr2i (ENSSFOG00015022523) ENSSFOG00015022528 snrpd2 (ENSSFOG00015022535) ENSSFOG00015022551 ENSSFOG00015026150 AKT2 (ENSSFOG00015027437) ENSSFOG00015022592 NHLRC3 (ENSSFOG00015022601) LHFPL1 (ENSSFOG00015022607) foxo1b (ENSSFOG00015022613) mrps31 (ENSSFOG00015022620) slc25a15b (ENSSFOG00015022636) tm4sf21a (ENSSFOG00015022651) mpdu1a (ENSSFOG00015022656) Osteoglossiformes ANCESTRAL SPECIES 470 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663.a ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.a.b ##22 Asian bonytongue MODERN SPECIES 1 FAM118B (ENSSFOG00015008886) SRPRA (ENSSFOG00015008837) ENSSFOG00015008807 KCNJ5 (ENSSFOG00015008783) kcnj1a.6 (ENSSFOG00015008778) fli1 (ENSSFOG00015031816) ENSSFOG00015032498 ets1 (ENSSFOG00015024540) smtla (ENSSFOG00015008616) ENSSFOG00015030977 KIRREL3 (ENSSFOG00015022386) BARX2 (ENSSFOG00015029946) rbm7 (ENSSFOG00015028703) ENSSFOG00015008431 GRAMD1B (ENSSFOG00015008307) ENSSFOG00015008260 ##22 SIDT2 (ENSSFOG00015008183) pafah1b2 (ENSSFOG00015008172) SIK3 (ENSSFOG00015008111) TMEM25 (ENSSFOG00015008088) CD3D (ENSSFOG00015008066) ENSSFOG00015008054 MPZL2 (ENSSFOG00015007994) MPZL3 (ENSSFOG00015029129) scn2b (ENSSFOG00015029952) scn4ba (ENSSFOG00015007889) ENSSFOG00015007845 il10ra (ENSSFOG00015007802) tmprss13b (ENSSFOG00015007782) TMPRSS13 (ENSSFOG00015028117) fxyd6 (ENSSFOG00015007731) P. kingsleyae MODERN SPECIES 101 ei24 (ENSPKIG00000015962) stt3a (ENSPKIG00000016006) FAM118B (ENSPKIG00000016061) SRPRA (ENSPKIG00000016106) ST3GAL4 (ENSPKIG00000016173) KCNJ5 (ENSPKIG00000016263) kcnj1a.6 (ENSPKIG00000016291) fli1 (ENSPKIG00000016322) ets1 (ENSPKIG00000016394) smtla (ENSPKIG00000016476) KIRREL3 (ENSPKIG00000016557) BARX2 (ENSPKIG00000016634) rbm7 (ENSPKIG00000016648) ENSPKIG00000016667 GRAMD1B (ENSPKIG00000016823) ENSPKIG00000017159 ##22 ENSPKIG00000017192 Clupeocephala ANCESTRAL SPECIES 49 ENSGT00390000003924 ENSGT00990000203615.b.b.a ENSGT00950000182818.C.b ENSGT00940000157126.f ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00390000008657 ENSGT00390000009554 ENSGT00940000163875.a.b.b ENSGT00940000161093 ENSGT01030000234556.a.b.a ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408.a.a Euteleosteomorpha ANCESTRAL SPECIES 302 ENSGT00390000003924 ENSGT00990000203615.b.b.a ENSGT00950000182818.C.b ENSGT00940000157126.f ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b Protacanthopterygii ANCESTRAL SPECIES 44 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000160149 ENSGT01030000234556.a.b.a ENSGT00940000161093 ENSGT00940000163875.a.b.b ENSGT00390000009554 ENSGT00390000008657 ENSGT00390000003924 ENSGT00990000203615.b.b.a ENSGT00950000182818.C.b ENSGT00940000157126.f ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00390000017608.l ENSGT00940000156765.a.b ENSGT00940000155156.b ENSGT00520000055616.a ENSGT00390000016589.d ENSGT00390000016589.c ENSGT00940000155843 ENSGT00390000013087 ENSGT00950000183068.a.b.c ENSGT00950000182924.B.a.b ENSGT00940000164397.b ENSGT00940000158570 ENSGT00940000157177 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 39 ENSGT01030000234556.a.b.a.h ENSGT00940000161093 ENSGT00940000163875.a.b.b.a ENSGT00390000009554.g ENSGT00390000008657 ENSGT00390000003924 ENSGT00940000158893.r ENSGT01080000257365.b.a.b.a.b.i ENSGT00940000159519.h ENSGT00950000182818.C.b ENSGT00940000157126.f.d ENSGT00390000009255 ENSGT00940000164937.a.b.d ENSGT00940000156649.c.b.e ENSGT00950000183181.B.b.l.a.c ##22 ENSGT01030000234517.F.c ENSGT00390000013448.a.b ENSGT00940000157826.c.a.f.a ENSGT00940000159359.r ENSGT00390000017608.l ENSGT00940000156765.a.b.a ENSGT00940000155156.b.e ENSGT01030000234954 ENSGT00520000055616.a.f ENSGT00390000016589.c ENSGT00940000155843 ENSGT00950000183068.a.b.c.d ENSGT00950000182924.B.a.b.a ENSGT00940000164397.b.d ENSGT00940000158570.m Huchen MODERN SPECIES 1364 ENSHHUG00000034880 ENSHHUG00000034652 ENSHHUG00000034642 ##22 ENSHHUG00000034623 ENSHHUG00000034616 ENSHHUG00000034615 snrpd2 (ENSHHUG00000034592) Salmoninae_a ANCESTRAL SPECIES 44 ENSGT01030000234556.a.b.a.h ENSGT00940000161093 ENSGT00940000163875.a.b.b.a ENSGT00390000009554.g ENSGT00390000008657 ENSGT01090000260030.a.b.a.b.b.b.d ENSGT00390000003924 ENSGT00940000158893.r ENSGT01080000257365.b.a.b.a.b.i ENSGT00940000159519.h ENSGT00950000182818.C.b ENSGT00940000157126.f.d ENSGT00390000009255 ENSGT00940000164937.a.b.d ENSGT00940000156649.c.b.e ENSGT00950000183181.B.b.l.a.c ##22 ENSGT01030000234517.F.c ENSGT00940000159359.r ENSGT00390000017608.l ENSGT00940000156765.a.b.a ENSGT00940000155156.b.e ENSGT00390000016589.c ENSGT00520000055616.a.f ENSGT00940000155843 ENSGT00950000183068.a.b.c.d ENSGT00950000182924.B.a.b.a ENSGT00940000164397.b.d ENSGT00940000158570.m ENSGT00940000157177.a ENSGT00940000156580.d ENSGT00940000161317 Salmo ANCESTRAL SPECIES 17 ENSGT01030000234556.a.b.a.h ENSGT00940000161093 ENSGT00940000163875.a.b.b.a ENSGT00390000009554.g ENSGT00390000008657 ENSGT01090000260030.a.b.a.b.b.b.d ENSGT00390000003924 ENSGT00940000158893.r ENSGT01080000257365.b.a.b.a.b.i ENSGT00940000159519.h ENSGT00950000182818.C.b ENSGT00940000157126.f.d ENSGT00390000009255 ENSGT00940000164937.a.b.d ENSGT00940000156649.c.b.e ENSGT00950000183181.B.b.l.a.c ##22 ENSGT01030000234517.F.c ENSGT00940000159359.r ENSGT00390000017608.l ENSGT00940000156765.a.b.a ENSGT00940000155156.b.e ENSGT00390000016589.c ENSGT00520000055616.a.f ENSGT00940000155843 ENSGT00950000183068.a.b.c.d ENSGT00950000182924.B.a.b.a ENSGT00940000164397.b.d ENSGT00940000158570.m.a ENSGT00940000157177.a ENSGT00940000156580.d ENSGT00940000161317 River trout MODERN SPECIES 10 ENSSTUG00000035909 KLHL35 (ENSSTUG00000035867) ENSSTUG00000035853 emsy (ENSSTUG00000035781) ENSSTUG00000035771 NHLRC3 (ENSSTUG00000035748) ENSSTUG00000035738 dcps (ENSSTUG00000035724) ST3GAL4 (ENSSTUG00000035717) ENSSTUG00000035696 smtlb (ENSSTUG00000035684) KIRREL3 (ENSSTUG00000035425) smfn (ENSSTUG00000035375) ENSSTUG00000035372 GRAMD1B (ENSSTUG00000035175) ENSSTUG00000035159 ##22 ENSSTUG00000034901 ENSSTUG00000034881 ENSSTUG00000034880 ENSSTUG00000034870 snrpd2 (ENSSTUG00000034847) vaspa (ENSSTUG00000034814) ENSSTUG00000034807 dlg2 (ENSSTUG00000032326) tmem126a (ENSSTUG00000032224) CREBZF (ENSSTUG00000026767) ENSSTUG00000026726 picalma (ENSSTUG00000026201) ENSSTUG00000026148 SEC24A (ENSSTUG00000024365) sar1b (ENSSTUG00000024315) Atlantic salmon MODERN SPECIES 23 NHLC3 (ENSSSAG00000064134) ENSSSAG00000064139 ENSSSAG00000093459 dcps (ENSSSAG00000064142) st3gal4 (ENSSSAG00000064145) ENSSSAG00000095245 ets1 (ENSSSAG00000064153) smtlb (ENSSSAG00000064165) ENSSSAG00000079321 ENSSSAG00000101248 ENSSSAG00000085727 ENSSSAG00000116832 rexo2 (ENSSSAG00000067063) ENSSSAG00000067073 ENSSSAG00000067109 ENSSSAG00000119637 ##22 ENSSSAG00000067347 ENSSSAG00000097156 ENSSSAG00000067420 ENSSSAG00000105847 SMD2 (ENSSSAG00000067428) ENSSSAG00000067451 ENSSSAG00000085412 ENSSSAG00000114114 CREBZF (ENSSSAG00000103873) tmem126a (ENSSSAG00000071256) ENSSSAG00000005211 ENSSSAG00000005304 SEC24A (ENSSSAG00000005541) sar1a (ENSSSAG00000006705) JADE2 (ENSSSAG00000095083) Oncorhynchus ANCESTRAL SPECIES 41 ENSGT00940000160149 ENSGT01030000234556.a.b.a.h ENSGT00940000161093 ENSGT00940000163875.a.b.b.a ENSGT00390000009554.g ENSGT00390000008657 ENSGT01090000260030.a.b.a.b.b.b.d ENSGT00390000003924 ENSGT00940000158893.r ENSGT00940000159519.h ENSGT00950000182818.C.b ENSGT00940000157126.f.d ENSGT00390000009255.c ENSGT00940000164937.a.b.d ENSGT00940000156649.c.b.e ENSGT00950000183181.B.b.l.a.c ##22 ENSGT01030000234517.F.c ENSGT00940000159359.r ENSGT00390000017608.l ENSGT00940000156765.a.b.a ENSGT00940000155156.b.e ENSGT00390000016589.c ENSGT00940000155843 ENSGT00950000183068.a.b.c.d ENSGT00950000182924.B.a.b.a ENSGT00940000164397.b.d.a ENSGT00940000164397.b.d.b ENSGT00940000158570.m ENSGT00940000157177.a ENSGT00940000156580.d ENSGT00940000161317 Oncorhynchus_a ANCESTRAL SPECIES 43 ENSGT00940000160149 ENSGT01030000234556.a.b.a.h ENSGT00940000161093 ENSGT00940000163875.a.b.b.a ENSGT00390000009554.g ENSGT00390000008657 ENSGT01090000260030.a.b.a.b.b.b.d ENSGT00390000003924 ENSGT00940000158893.r ENSGT00940000159519.h ENSGT00950000182818.C.b ENSGT00940000157126.f.d ENSGT00390000009255.c ENSGT00940000164937.a.b.d ENSGT00940000156649.c.b.e ENSGT00950000183181.B.b.l.a.c ##22 ENSGT01030000234517.F.c ENSGT00940000159359.r ENSGT00390000017608.l ENSGT00940000156765.a.b.a.c ENSGT00940000161317.a ENSGT00940000158124.f ENSGT00390000009391.b.d ENSGT00940000154508.a.b.f ENSGT00940000156288.a.c ENSGT00940000167667.c.a ENSGT00940000163251.a.b.b ENSGT00940000163251.a.a ENSGT00940000163251.a.b.a ENSGT00940000159536.a ENSGT00940000157695.o.a Chinook salmon MODERN SPECIES 23 rasa4 (ENSOTSG00005020657) mpzl1l (ENSOTSG00005020654) KLHL35 (ENSOTSG00005020652) ENSOTSG00005020651 emsy (ENSOTSG00005020610) ENSOTSG00005020608 dcps (ENSOTSG00005020607) NHLRC3 (ENSOTSG00005020606) ST3GAL4 (ENSOTSG00005020605) ENSOTSG00005020604 smtlb (ENSOTSG00005020603) KIRREL3 (ENSOTSG00005020579) smfn (ENSOTSG00005020570) ENSOTSG00005020568 GRAMD1B (ENSOTSG00005020541) ENSOTSG00005020540 ##22 ENSOTSG00005020532 ENSOTSG00005020529 ENSOTSG00005020527 ENSOTSG00005020526 ENSOTSG00005013564 pdlim4 (ENSOTSG00005013551) p4ha2 (ENSOTSG00005008934) JAKMIP2 (ENSOTSG00005008901) dpysl3 (ENSOTSG00005008657) STK32A (ENSOTSG00005008643) stk10 (ENSOTSG00005007860) SH3PXD2B (ENSOTSG00005007427) ENSOTSG00005007422 GABRB2 (ENSOTSG00005007421) GABRA6 (ENSOTSG00005007420) Coho salmon MODERN SPECIES 20 ENSOKIG00005030424 mpzl1l (ENSOKIG00005030439) KLHL35 (ENSOKIG00005030486) ENSOKIG00005030502 emsy (ENSOKIG00005030547) ENSOKIG00005030701 dcps (ENSOKIG00005030740) ENSOKIG00005030752 ST3GAL4 (ENSOKIG00005030763) ENSOKIG00005030790 smtlb (ENSOKIG00005030815) KIRREL3 (ENSOKIG00005030880) smfn (ENSOKIG00005031583) ENSOKIG00005031611 ENSOKIG00005031761 ENSOKIG00005034301 ##22 ENSOKIG00005034339 ENSOKIG00005034423 ENSOKIG00005034426 ENSOKIG00005034433 vaspa (ENSOKIG00005034460) dlg2 (ENSOKIG00005034493) ENSOKIG00005034767 ENSOKIG00005034784 CREBZF (ENSOKIG00005034985) ENSOKIG00005035036 picalma (ENSOKIG00005035124) SEC24A (ENSOKIG00005035431) ENSOKIG00005036526 JADE2 (ENSOKIG00005036563) ENSOKIG00005036587 Rainbow trout MODERN SPECIES 1 mpzl1l (ENSOMYG00000031639) ENSOMYG00000031625 ENSOMYG00000031620 emsy (ENSOMYG00000031596) ENSOMYG00000031555 ENSOMYG00000031540 dcps (ENSOMYG00000031528) ENSOMYG00000031507 ENSOMYG00000031462 smtlb (ENSOMYG00000031455) ENSOMYG00000059725 ENSOMYG00000030220 smfn (ENSOMYG00000029653) ENSOMYG00000029612 ENSOMYG00000023578 ENSOMYG00000059211 ##22 ENSOMYG00000022457 ENSOMYG00000022438 ENSOMYG00000022434 ENSOMYG00000061563 ENSOMYG00000065917 vaspa (ENSOMYG00000022352) ENSOMYG00000022314 ENSOMYG00000050423 ENSOMYG00000070377 dlg2 (ENSOMYG00000020611) CREBZF (ENSOMYG00000020478) ENSOMYG00000020463 ENSOMYG00000052358 picalma (ENSOMYG00000020200) SEC24A (ENSOMYG00000018809) Salmoninae ANCESTRAL SPECIES 395 ENSGT00990000203615.b.b.a ENSGT00940000157126.f.c ENSGT00940000164937.a.b.c ENSGT00940000156649.c.b.f ENSGT00950000183181.B.b.l.a.d ##22 ENSGT01030000234517.F.d ENSGT00940000159359.s ENSGT00940000156765.a.b.b ENSGT00940000155156.b.f ENSGT00520000055616.a.e ENSGT00390000016589.d ENSGT00390000013087 ENSGT00950000183068.a.b.c.c ENSGT00950000182924.B.a.b.b ENSGT00940000164397.b.c ENSGT00940000158570.n ENSGT00940000157177.b ENSGT00940000156580.c ENSGT00550000074618.a.a.mb.a ENSGT00940000159831.g Salmoninae_a ANCESTRAL SPECIES 4 ENSGT00940000158657.h ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.d.b ENSGT00390000012008.a.d ENSGT00940000157627.f ENSGT00940000157662.g.a.a ENSGT00940000162993 ENSGT00940000160014.c ENSGT00940000157317.n ENSGT00390000006208.a.j ENSGT00940000156758.w.a.a.a ENSGT01090000260030.a.b.a.b.b.b.c.b ENSGT00990000203615.b.b.a ENSGT00940000157126.f.c ENSGT00940000164937.a.b.c ENSGT00940000156649.c.b.f ENSGT00950000183181.B.b.l.a.d ##22 ENSGT01030000234517.F.d ENSGT00940000159359.s.a ENSGT00940000156765.a.b.b ENSGT00940000155156.b.f ENSGT01040000240375.D ENSGT00520000055616.a.e ENSGT00390000016589.d ENSGT00390000013087 ENSGT00950000183068.a.b.c.c ENSGT00950000182924.B.a.b.b ENSGT00940000164397.b.c ENSGT00940000158570.n ENSGT00940000157177.b ENSGT00940000156580.c ENSGT00550000074618.a.a.mb.a Salmo ANCESTRAL SPECIES 44 ENSGT00940000156758.w.a.a.a ENSGT00940000153883.b.j ENSGT00940000156492.l ENSGT00940000158479.f ENSGT00940000157641.l ENSGT00940000159414.f ENSGT00940000159426.u.b ENSGT01030000234556.a.b.a.g ENSGT00940000163875.a.b.b.b ENSGT00390000009554.h ENSGT01090000260030.a.b.a.b.b.b.c.b ENSGT00990000203615.b.b.a ENSGT00940000157126.f.c ENSGT00940000164937.a.b.c ENSGT00940000156649.c.b.f ENSGT00950000183181.B.b.l.a.d ##22 ENSGT01030000234517.F.d ENSGT00940000159359.s.b ENSGT00940000156765.a.b.b ENSGT00940000155156.b.f ENSGT01040000240375.D.s.a.a.b.b.b.a.a.a.a ENSGT00520000055616.a.e ENSGT00390000016589.d ENSGT00390000013087 ENSGT00950000183068.a.b.c.c ENSGT00950000182924.B.a.b.b ENSGT00940000164397.b.c ENSGT00940000158570.n ENSGT00940000158570.m.b ENSGT00940000157177.b ENSGT00940000156580.c River trout MODERN SPECIES 6 ENSSTUG00000007756 dtx2 (ENSSTUG00000007747) GTF2IRD1 (ENSSTUG00000007697) CLIP2 (ENSSTUG00000007443) mpzl1l (ENSSTUG00000007425) ENSSTUG00000007421 emsy (ENSSTUG00000007350) ENSSTUG00000007339 ENSSTUG00000007338 kcnj1b (ENSSTUG00000007324) KIRREL3 (ENSSTUG00000007047) ENSSTUG00000007036 ENSSTUG00000007021 ENSSTUG00000007019 GRAMD1B (ENSSTUG00000006853) ENSSTUG00000006839 ##22 ENSSTUG00000006819 OVOL2 (ENSSTUG00000006796) vaspa (ENSSTUG00000006764) dlg2 (ENSSTUG00000004572) tmem126a (ENSSTUG00000004503) CREBZF (ENSSTUG00000004497) ENSSTUG00000004470 picalma (ENSSTUG00000003808) SEC24A (ENSSTUG00000003280) ENSSTUG00000003267 sar1b (ENSSTUG00000003243) JADE2 (ENSSTUG00000003225) cdkn2aipnl (ENSSTUG00000003213) ube2b (ENSSTUG00000003141) ppp2cab (ENSSTUG00000003114) Atlantic salmon MODERN SPECIES 4 ENSSSAG00000079788 tmem132e (ENSSSAG00000079784) dtx2 (ENSSSAG00000088541) ENSSSAG00000108660 ENSSSAG00000079774 ENSSSAG00000079750 mpzl1l (ENSSSAG00000079748) ENSSSAG00000104741 ENSSSAG00000095201 emsy (ENSSSAG00000079717) ENSSSAG00000079708 ENSSSAG00000079704 ENSSSAG00000064211 ENSSSAG00000079275 ENSSSAG00000079234 ENSSSAG00000079223 ##22 ENSSSAG00000079188 ENSSSAG00000115813 ENSSSAG00000109304 dlg2 (ENSSSAG00000109902) tmem126a (ENSSSAG00000073700) CREBZF (ENSSSAG00000073699) ccdc83 (ENSSSAG00000098038) picalma (ENSSSAG00000068138) SEC24A (ENSSSAG00000065831) ENSSSAG00000082595 JADE2 (ENSSSAG00000065776) ube2b (ENSSSAG00000090070) ENSSSAG00000108779 ppp2cab (ENSSSAG00000065756) tcf7 (ENSSSAG00000006857) Oncorhynchus ANCESTRAL SPECIES 4 ENSGT00390000006208.a.j ENSGT00940000156758.w.a.a.a ENSGT00940000158479.f ENSGT00940000157641.l ENSGT00940000159414.f.b ENSGT00940000159426.u.b ENSGT01030000234556.a.b.a.g ENSGT00940000163875.a.b.b.b ENSGT00390000009554.h ENSGT01100000263505.b.b.b.b.a ENSGT01090000260030.a.b.a.b.b.b.c.b ENSGT00990000203615.b.b.a ENSGT00940000157126.f.c ENSGT00940000164937.a.b.c ENSGT00940000156649.c.b.f ENSGT00950000183181.B.b.l.a.d ##22 ENSGT01030000234517.F.d ENSGT00940000159359.s.a ENSGT00940000156765.a.b.b ENSGT00940000155156.b.f ENSGT00520000055616.a.e ENSGT00390000016589.d ENSGT00390000013087 ENSGT00950000183068.a.b.c.c ENSGT00950000182924.B.a.b.b ENSGT00940000164397.b.c ENSGT00940000158570.n ENSGT00940000157177.b ENSGT00940000156580.c ENSGT00550000074618.a.a.mb.a ENSGT00940000154245.A.kb.c.a Oncorhynchus_a ANCESTRAL SPECIES 2 ENSGT00390000006208.a.j ENSGT00940000156758.w.a.a.a ENSGT00940000158479.f ENSGT00940000157641.l ENSGT00940000159414.f.a ENSGT00940000159426.u.b ENSGT01030000234556.a.b.a.g ENSGT00940000163875.a.b.b.b ENSGT00390000009554.h ENSGT01100000263505.b.b.b.b.a ENSGT01090000260030.a.b.a.b.b.b.c.b ENSGT00990000203615.b.b.a ENSGT00940000157126.f.c ENSGT00940000164937.a.b.c ENSGT00940000156649.c.b.f ENSGT00950000183181.B.b.l.a.d ##22 ENSGT01030000234517.F.d ENSGT00940000159359.s.a ENSGT01000000220481 ENSGT00940000159359.s.b ENSGT00940000156765.a.b.b ENSGT00940000155156.b.f ENSGT00520000055616.a.e ENSGT00390000016589.d ENSGT00390000013087 ENSGT00950000183068.a.b.c.c ENSGT00950000182924.B.a.b.b ENSGT00940000164397.b.c ENSGT00940000158570.n ENSGT00940000157177.b ENSGT00940000156580.c Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 33 castor2 (ENSOTSG00005014218) ENSOTSG00005014224 tmem132e (ENSOTSG00005014226) dtx2 (ENSOTSG00005014227) ENSOTSG00005014228 CLIP2 (ENSOTSG00005014233) mpzl1l (ENSOTSG00005014236) ENSOTSG00005014238 emsy (ENSOTSG00005014240) ENSOTSG00005014290 ENSOTSG00005014291 kcnj1b (ENSOTSG00005014292) KIRREL3 (ENSOTSG00005014293) ENSOTSG00005016426 GRAMD1B (ENSOTSG00005016474) ENSOTSG00005025311 ##22 ENSOTSG00005025313 ENSOTSG00005025317 vaspa (ENSOTSG00005025318) ENSOTSG00005025321 dlg2 (ENSOTSG00005025392) tmem126a (ENSOTSG00005040520) CREBZF (ENSOTSG00005040522) ENSOTSG00005040524 picalma (ENSOTSG00005040531) SEC24A (ENSOTSG00005040541) sar1b (ENSOTSG00005040563) JADE2 (ENSOTSG00005040566) cdkn2aipnl (ENSOTSG00005040568) ube2b (ENSOTSG00005040569) ppp2cab (ENSOTSG00005040571) Chinook salmon MODERN SPECIES 33 castor2 (ENSOTSG00005030694) ENSOTSG00005030719 tmem132e (ENSOTSG00005030721) dtx2 (ENSOTSG00005030722) GTF2IRD1 (ENSOTSG00005030723) CLIP2 (ENSOTSG00005030726) mpzl1l (ENSOTSG00005030727) ENSOTSG00005030728 emsy (ENSOTSG00005030734) ENSOTSG00005030767 ENSOTSG00005030770 kcnj1b (ENSOTSG00005030771) KIRREL3 (ENSOTSG00005030780) ENSOTSG00005031705 GRAMD1B (ENSOTSG00005031750) ENSOTSG00005036300 ##22 ENSOTSG00005036305 ENSOTSG00005036314 vaspa (ENSOTSG00005036317) ENSOTSG00005036319 dlg2 (ENSOTSG00005036357) tmem126a (ENSOTSG00005044855) CREBZF (ENSOTSG00005044874) ENSOTSG00005044906 picalma (ENSOTSG00005044908) SEC24A (ENSOTSG00005045089) sar1b (ENSOTSG00005045090) JADE2 (ENSOTSG00005045091) cdkn2aipnl (ENSOTSG00005045092) ube2b (ENSOTSG00005045093) ppp2cab (ENSOTSG00005045094) Coho salmon MODERN SPECIES 26 tmem132e (ENSOKIG00005030279) dtx2 (ENSOKIG00005030341) ENSOKIG00005030379 CLIP2 (ENSOKIG00005030488) ENSOKIG00005030582 EMSY (ENSOKIG00005030646) ENSOKIG00005030735 kcnj1b (ENSOKIG00005030739) ENSOKIG00005030746 KIRREL3 (ENSOKIG00005030794) ENSOKIG00005031124 ENSOKIG00005031133 ENSOKIG00005031145 ENSOKIG00005031188 ENSOKIG00005031198 ENSOKIG00005031220 ##22 ENSOKIG00005031236 ENSOKIG00005031298 vaspa (ENSOKIG00005031338) dlg2 (ENSOKIG00005031461) tmem126a (ENSOKIG00005032452) CREBZF (ENSOKIG00005032472) ccdc83 (ENSOKIG00005032480) picalma (ENSOKIG00005032510) SEC24A (ENSOKIG00005032693) sar1b (ENSOKIG00005033569) JADE2 (ENSOKIG00005033619) cdkn2aipnl (ENSOKIG00005033657) ube2b (ENSOKIG00005033676) ppp2cab (ENSOKIG00005033701) ENSOKIG00005033719 Rainbow trout MODERN SPECIES 3 ENSOMYG00000014393 tmem132e (ENSOMYG00000014486) dtx2 (ENSOMYG00000014506) ENSOMYG00000014519 ENSOMYG00000014553 mpzl1l (ENSOMYG00000014613) ENSOMYG00000014619 emsy (ENSOMYG00000014644) ENSOMYG00000014685 ENSOMYG00000014693 ENSOMYG00000014700 ENSOMYG00000014715 ENSOMYG00000014762 ENSOMYG00000015054 ENSOMYG00000053222 ENSOMYG00000018949 ##22 ENSOMYG00000018969 ENSOMYG00000019005 vaspa (ENSOMYG00000019012) dlg2 (ENSOMYG00000019190) ENSOMYG00000075574 tmem126a (ENSOMYG00000019702) CREBZF (ENSOMYG00000019707) ENSOMYG00000019725 picalma (ENSOMYG00000019800) ENSOMYG00000065853 SEC24A (ENSOMYG00000019934) ENSOMYG00000019992 JADE2 (ENSOMYG00000056539) cdkn2aipnl (ENSOMYG00000019997) ube2b (ENSOMYG00000020002) Huchen MODERN SPECIES 713 ENSHHUG00000052915 ENSHHUG00000052916 ##22 ENSHHUG00000052917 VASP (ENSHHUG00000052918) ENSHHUG00000052919 dlg2 (ENSHHUG00000052920) tmem126a (ENSHHUG00000052921) ENSHHUG00000052922 ccdc83 (ENSHHUG00000052923) picalma (ENSHHUG00000052924) SEC24A (ENSHHUG00000052925) sar1b (ENSHHUG00000052926) ENSHHUG00000052927 Northern pike MODERN SPECIES 6 rasa4 (ENSELUG00000000863) mpzl1l (ENSELUG00000019761) ENSELUG00000026645 KLHL35 (ENSELUG00000019778) ENSELUG00000001552 emsy (ENSELUG00000019849) NHLRC3 (ENSELUG00000019886) dcps (ENSELUG00000019902) kcnj1b (ENSELUG00000019914) smtlb (ENSELUG00000019921) ENSELUG00000000877 KIRREL3 (ENSELUG00000020008) smfn (ENSELUG00000020072) ENSELUG00000020098 GRAMD1B (ENSELUG00000020203) ENSELUG00000020255 ##22 ENSELUG00000020321 ENSELUG00000020343 ENSELUG00000026031 snrpd2 (ENSELUG00000020393) vaspa (ENSELUG00000020433) dlg2 (ENSELUG00000000901) ENSELUG00000034232 tmem126a (ENSELUG00000029889) CREBZF (ENSELUG00000000907) ENSELUG00000020635 ccdc83 (ENSELUG00000020685) picalma (ENSELUG00000020842) SEC24A (ENSELUG00000020869) sar1b (ENSELUG00000020912) JADE2 (ENSELUG00000020933) Acanthomorphata ANCESTRAL SPECIES 14 ENSGT00530000063743.b ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 ENSGT00940000159095 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000157126.f ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00920000150321 ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00390000013087 ENSGT00940000155843 ENSGT00940000155156.b ENSGT00940000158592 ENSGT00390000006659 Euacanthomorphacea ANCESTRAL SPECIES 19 ENSGT00390000008162.e ENSGT00940000157317 ENSGT00390000006208.a ENSGT00940000156758 ENSGT00940000153883.b ENSGT00940000156492 ENSGT00940000159095 ENSGT00940000158479 ENSGT00940000157641 ENSGT00940000159414 ENSGT00940000159426 ENSGT00940000157126.f ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00920000150321 ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT00940000155156.b ENSGT00940000158592 ENSGT00390000006659 Percomorphaceae ANCESTRAL SPECIES 9 ENSGT00940000161538 ENSGT00940000160946 ENSGT00940000178266 ENSGT00940000159055 ENSGT00940000157126.f ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00390000002960.d ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT00940000155156.b ENSGT00940000158592 ENSGT00390000006659 ENSGT00390000009588 ENSGT00390000015123 ENSGT00940000153635.A Percomorphaceae_B ANCESTRAL SPECIES 10 ENSGT00940000161538 ENSGT00940000160946 ENSGT00940000178266 ENSGT00940000159055 ENSGT00390000015123 ENSGT00390000009588 ENSGT00390000006659 ENSGT00390000000083.b ENSGT00940000159985 ENSGT00390000002960.d ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT01030000234954 ENSGT00960000186804 ENSGT00940000155156.b ENSGT00940000158592 Percomorphaceae_C ANCESTRAL SPECIES 10 ENSGT00390000002960.d ENSGT00940000159985 ENSGT00390000000083.b ENSGT00390000006659 ENSGT00390000009588 ENSGT00390000015123 ENSGT01030000235478 ENSGT00940000175043 ENSGT00940000159055 ENSGT00730000112379 ENSGT00940000157126.f ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT01030000234954 ENSGT00960000186804 ENSGT00940000155156.b ENSGT00940000158592 Eupercaria ANCESTRAL SPECIES 17 ENSGT00940000161538 ENSGT00940000160946 ENSGT00940000178266 ENSGT00940000159055 ENSGT01030000235478 ENSGT00390000009588 ENSGT00390000006659 ENSGT00390000000083.b ENSGT00940000159985 ENSGT00390000002960.d ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT01030000234954 ENSGT00960000186804 ENSGT00940000155156.b ENSGT00940000158592 Tetraodontidae ANCESTRAL SPECIES 28 ENSGT01030000234582.e.b ENSGT00530000063947.C.d ENSGT00940000159975.d ENSGT00940000161028 ENSGT00390000016511 ENSGT00530000063764.a ENSGT00390000002429 ENSGT00940000159908 ENSGT00940000157890 ENSGT00940000161538 ENSGT00940000160946 ENSGT00940000159985 ENSGT00390000002960.d ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT00940000155156.b ENSGT00940000158592 ENSGT00940000153635.A ENSGT00940000157686 Fugu MODERN SPECIES 6 PRDM15 (ENSTRUG00000001452) ENSTRUG00000033400 ENSTRUG00000029843 ENSTRUG00000028736 ENSTRUG00000027805 ENSTRUG00000028208 ENSTRUG00000032746 AMOT (ENSTRUG00000007915) ENSTRUG00000026961 PRRG3 (ENSTRUG00000032215) ENSTRUG00000000926 HLCS (ENSTRUG00000008213) smfn (ENSTRUG00000021529) ENSTRUG00000008375 ENSTRUG00000031901 ENSTRUG00000024144 ##22 ENSTRUG00000028886 ENSTRUG00000028236 ENSTRUG00000008625 vaspa (ENSTRUG00000025541) akt2l (ENSTRUG00000008633) ENSTRUG00000031252 ENSTRUG00000032447 CBLB (ENSTRUG00000000517) alcama (ENSTRUG00000000595) ZPLD1 (ENSTRUG00000000751) picalma (ENSTRUG00000000796) ENSTRUG00000001148 dlg2 (ENSTRUG00000001498) ENSTRUG00000029573 ENSTRUG00000021000 Eupecaria_A ANCESTRAL SPECIES 17 ENSGT00390000009255 ENSGT00390000002960.d ENSGT00940000159985 ENSGT00390000000083.b ENSGT00390000006659 ENSGT00390000009588 ENSGT01030000235478 ENSGT00940000159055 ENSGT00730000112379 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT01030000234954 ENSGT00960000186804 ENSGT00940000155156.b ENSGT00940000158592 Ballan wrasse MODERN SPECIES 319 ENSLBEG00000005537 ENSLBEG00000005562 RNF26 (ENSLBEG00000005587) ins (ENSLBEG00000005600) nipal4 (ENSLBEG00000005619) ENSLBEG00000005650 AMOT (ENSLBEG00000005733) ENSLBEG00000005800 ENSLBEG00000005818 tiprl (ENSLBEG00000005867) riox2 (ENSLBEG00000005920) ENSLBEG00000005947 HLCS (ENSLBEG00000005971) smfn (ENSLBEG00000006021) ENSLBEG00000006053 ENSLBEG00000006070 ##22 ENSLBEG00000006082 ENSLBEG00000006111 ENSLBEG00000006154 PRRG3 (ENSLBEG00000006173) Eupecaria_B ANCESTRAL SPECIES 17 ENSGT00390000009255 ENSGT00390000002960.d ENSGT00940000159985 ENSGT00390000000083.b ENSGT00390000006659 ENSGT00390000009588 ENSGT01030000235478 ENSGT00940000160946 ENSGT00940000161538 ENSGT00940000159055 ENSGT00940000178266 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT00940000155156.b ENSGT00940000158592 ENSGT00940000153635.A ENSGT00940000157686 Eupecaria_C ANCESTRAL SPECIES 15 ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT00940000155156.b ENSGT00940000158592 ENSGT00940000153635.A ENSGT00940000157686 Eupercaria_incertae_sedis ANCESTRAL SPECIES 12 ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT00940000155156.b ENSGT00940000158592 ENSGT00940000153635.A ENSGT00940000157686 European seabass MODERN SPECIES 4 ENSDLAG00005024644 ENSDLAG00005021640 ENSDLAG00005027074 ENSDLAG00005016921 ENSDLAG00005002674 ENSDLAG00005032716 ENSDLAG00005024647 ENSDLAG00005016909 ENSDLAG00005016717 ENSDLAG00005004737 ENSDLAG00005013862 ENSDLAG00005034462 ENSDLAG00005026606 ENSDLAG00005031432 ENSDLAG00005006580 ENSDLAG00005006895 ##22 ENSDLAG00005032384 ENSDLAG00005009865 ENSDLAG00005009859 vaspa (ENSDLAG00005030217) akt2l (ENSDLAG00005006920) ENSDLAG00005033414 CBLB (ENSDLAG00005007292) alcama (ENSDLAG00005007537) ENSDLAG00005016711 ZPLD1 (ENSDLAG00005007618) picalma (ENSDLAG00005007666) ENSDLAG00005008211 ENSDLAG00005000333 ENSDLAG00005001085 ENSDLAG00005001097 Large yellow croaker MODERN SPECIES 493 ENSLCRG00005020688 FOXO1 (ENSLCRG00005020734) ENSLCRG00005020735 ENSLCRG00005020736 snx19a (ENSLCRG00005020737) smfn (ENSLCRG00005020738) HLCS (ENSLCRG00005020740) ENSLCRG00005020742 PRRG3 (ENSLCRG00005020743) ripply1 (ENSLCRG00005020744) KIRREL3 (ENSLCRG00005020748) ENSLCRG00005021330 ENSLCRG00005021331 ENSLCRG00005021333 GRAMD1B (ENSLCRG00005021335) ENSLCRG00005021354 ##22 ENSLCRG00005021355 ENSLCRG00005021358 ENSLCRG00005021368 vaspa (ENSLCRG00005021370) akt2l (ENSLCRG00005021371) ENSLCRG00005021429 CBLB (ENSLCRG00005021434) alcama (ENSLCRG00005021445) ENSLCRG00005021449 ZPLD1 (ENSLCRG00005021451) picalma (ENSLCRG00005021456) ENSLCRG00005021514 dlg2 (ENSLCRG00005021515) BBX (ENSLCRG00005021547) vps11 (ENSLCRG00005021549) Perciformes ANCESTRAL SPECIES 60 ENSGT00940000159055 ENSGT00940000157126.f ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00940000180218 ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F Cottioidei ANCESTRAL SPECIES ENSGT00950000183181.B.b.l.a ##22 Lumpfish MODERN SPECIES 5 ENSCLMG00005003937 MX1 (ENSCLMG00005003939) MARK4 (ENSCLMG00005003941) ckma (ENSCLMG00005003944) nccrp1 (ENSCLMG00005003964) slc8a2a (ENSCLMG00005003969) hnrnpl (ENSCLMG00005004128) irf2bp1 (ENSCLMG00005004511) micu2 (ENSCLMG00005004524) ENSCLMG00005004552 tiprl (ENSCLMG00005004618) ska2 (ENSCLMG00005004637) ENSCLMG00005004653 ENSCLMG00005004661 ENSCLMG00005004684 ENSCLMG00005004755 ##22 ENSCLMG00005004784 AMOT (ENSCLMG00005004840) smfn (ENSCLMG00005004846) CBLB (ENSCLMG00005004854) alcama (ENSCLMG00005004911) ZPLD1 (ENSCLMG00005005151) picalma (ENSCLMG00005005157) ENSCLMG00005005196 dlg2 (ENSCLMG00005005222) BBX (ENSCLMG00005009273) vps11 (ENSCLMG00005009279) hyou1 (ENSCLMG00005009593) ENSCLMG00005011920 hspa8 (ENSCLMG00005011929) bsx (ENSCLMG00005013453) Perciformes_a ANCESTRAL SPECIES 116 ENSGT00940000157126.f ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00940000180218 ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F Pike perch MODERN SPECIES 184 KIRREL3 (ENSSLUG00000006585) smfn (ENSSLUG00000006518) ENSSLUG00000006488 ENSSLUG00000006479 ENSSLUG00000006474 ENSSLUG00000006467 ENSSLUG00000006461 ENSSLUG00000006456 ##22 ENSSLUG00000006287 AMOT (ENSSLUG00000006265) Channel bull blenny MODERN SPECIES 5 ENSCGOG00000024081 ENSCGOG00000024141 MMP1 (ENSCGOG00000024152) MMP1 (ENSCGOG00000004062) acat1 (ENSCGOG00000004136) tmprss2 (ENSCGOG00000004428) dscama (ENSCGOG00000004487) ENSCGOG00000005262 ENSCGOG00000005264 KIRREL3 (ENSCGOG00000005268) ENSCGOG00000005297 smfn (ENSCGOG00000005298) ENSCGOG00000005302 GRAMD1B (ENSCGOG00000005329) ENSCGOG00000006281 ENSCGOG00000006282 ##22 ENSCGOG00000006285 ei24 (ENSCGOG00000006298) stt3a (ENSCGOG00000006512) ENSCGOG00000008538 thap12a (ENSCGOG00000008541) ENSCGOG00000008543 wnt11 (ENSCGOG00000008559) uvrag (ENSCGOG00000008593) dgat2 (ENSCGOG00000008834) mogat2 (ENSCGOG00000008959) ENSCGOG00000009057 ENSCGOG00000009059 ZBTB21 (ENSCGOG00000009064) atg101 (ENSCGOG00000009066) C2CD2 (ENSCGOG00000009073) Percomorphaceae_D ANCESTRAL SPECIES 16 ENSGT00390000002960.d ENSGT00940000159985 ENSGT00390000000083.b ENSGT00390000006659 ENSGT00390000009588 ENSGT00390000015123 ENSGT00940000175043 ENSGT00940000159055 ENSGT00940000178266 ENSGT00940000160946 ENSGT00940000161538 ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT01030000234954 ENSGT00960000186804 ENSGT00940000155156.b ENSGT00940000158592 Anabantaria ANCESTRAL SPECIES 51 ENSGT00390000002960.d ENSGT00940000159985 ENSGT00940000159359 ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000161538 ENSGT00940000159055 ENSGT00940000175043 ENSGT00390000006659 ENSGT00390000000083.b Anabantoidei ANCESTRAL SPECIES 12 ENSGT00390000002960.d ENSGT00940000159985 ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT00940000155156.b ENSGT00940000158592 ENSGT00940000153635.A ENSGT00940000157686 Climbing perch MODERN SPECIES 5 ENSATEG00000015083 ENSATEG00000015113 ENSATEG00000015192 ENSATEG00000015219 ENSATEG00000015270 ENSATEG00000015313 ENSATEG00000015289 ENSATEG00000015351 ENSATEG00000015385 ENSATEG00000015401 ENSATEG00000015413 ENSATEG00000015431 ENSATEG00000015461 ##22 ENSATEG00000015504 ENSATEG00000015513 ENSATEG00000015532 vaspa (ENSATEG00000015536) akt2l (ENSATEG00000015555) ENSATEG00000015605 CBLB (ENSATEG00000015623) alcama (ENSATEG00000015663) ZPLD1 (ENSATEG00000015704) picalma (ENSATEG00000015738) ENSATEG00000015830 ENSATEG00000015938 ENSATEG00000015979 ENSATEG00000016023 ENSATEG00000016087 Zig-zag eel MODERN SPECIES 5 ENSMAMG00000026552 ENSMAMG00000021181 ENSMAMG00000026214 ENSMAMG00000021196 ENSMAMG00000021199 ENSMAMG00000027997 ENSMAMG00000021204 ##22 ENSMAMG00000021209 ENSMAMG00000021211 ENSMAMG00000021216 ENSMAMG00000021219 ENSMAMG00000021224 ENSMAMG00000021231 hnrnpl (ENSMAMG00000021232) slc8a2a (ENSMAMG00000021235) nccrp1 (ENSMAMG00000021240) ckma (ENSMAMG00000028699) ENSMAMG00000021246 ENSMAMG00000021253 ENSMAMG00000021259 ppp1r14aa (ENSMAMG00000021263) dlb (ENSMAMG00000021264) Carangaria ANCESTRAL SPECIES 16 ENSGT00390000002960.d ENSGT00940000159985 ENSGT00390000000083.b ENSGT00390000006659 ENSGT00390000009588 ENSGT00390000015123 ENSGT01030000235478 ENSGT00940000175043 ENSGT00940000159055 ENSGT00940000178266 ENSGT00940000160946 ENSGT00940000161538 ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT01030000234954 ENSGT00960000186804 ENSGT00940000155156.b ENSGT00940000158592 Pleuronectoidei ANCESTRAL SPECIES 27 ENSGT00390000002960.d ENSGT00940000159985 ENSGT00390000000083.b ENSGT00390000006659 ENSGT00390000009588 ENSGT00390000015123 ENSGT01030000235478 ENSGT00940000159055 ENSGT00940000178266 ENSGT00940000160946 ENSGT00940000161538 ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT00940000155156.b ENSGT00940000158592 ENSGT00940000153635.A ENSGT00940000157686 ENSGT00940000164443.b.a Turbot MODERN SPECIES 9 ENSSMAG00000019552 ENSSMAG00000027155 ENSSMAG00000019493 ENSSMAG00000021569 ENSSMAG00000019397 ENSSMAG00000018312 llgl2 (ENSSMAG00000018441) galk1 (ENSSMAG00000018554) ENSSMAG00000018576 ccdc57 (ENSSMAG00000018711) slc16a3b (ENSSMAG00000018963) CSNK1D (ENSSMAG00000018979) ENSSMAG00000019052 ENSSMAG00000023883 enpp7.2 (ENSSMAG00000016258) ENSSMAG00000034797 ##22 ENSSMAG00000016287 ENSSMAG00000022875 NRBP2 (ENSSMAG00000016325) ENSSMAG00000016381 SCRIB (ENSSMAG00000016403) cdv3 (ENSSMAG00000031905) ENSSMAG00000027206 topbp1 (ENSSMAG00000016593) ENSSMAG00000017046 ENSSMAG00000017090 ENSSMAG00000022979 ENSSMAG00000029973 ENSSMAG00000017105 ENSSMAG00000017121 ENSSMAG00000017176 Tongue sole MODERN SPECIES 10 nf2b (ENSCSEG00000018208) ENSCSEG00000018353 cldn29 (ENSCSEG00000018383) cldn3c (ENSCSEG00000018449) abhd11 (ENSCSEG00000018486) ENSCSEG00000018490 ENSCSEG00000018500 cct6a (ENSCSEG00000018519) NIPSNAP2 (ENSCSEG00000018553) mrps17 (ENSCSEG00000018563) ENSCSEG00000018572 LIMK1 (ENSCSEG00000018602) mntb (ENSCSEG00000018624) ENSCSEG00000018932 GRAMD1B (ENSCSEG00000018940) ENSCSEG00000018983 ##22 ENSCSEG00000018991 ENSCSEG00000018997 vaspa (ENSCSEG00000019000) akt2l (ENSCSEG00000019013) ENSCSEG00000019028 CBLB (ENSCSEG00000019033) alcama (ENSCSEG00000019239) ZPLD1 (ENSCSEG00000019245) picalma (ENSCSEG00000019258) ENSCSEG00000019369 dlg2 (ENSCSEG00000019415) BBX (ENSCSEG00000019500) vps11 (ENSCSEG00000019544) hyou1 (ENSCSEG00000019559) ENSCSEG00000019585 Carangaria_A ANCESTRAL SPECIES 97 ENSGT00390000002960.d ENSGT00940000159985 ENSGT00390000000083.b ENSGT00390000006659 ENSGT00390000009588 ENSGT00390000015123 ENSGT01030000235478 ENSGT00940000159055 ENSGT00940000178266 ENSGT00940000160946 ENSGT00940000161538 ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000159359 Seriola ANCESTRAL SPECIES 2 ENSGT00940000162488.b.a ENSGT00950000183107.a.b.b ENSGT00940000164304 ENSGT00390000005094.g ENSGT01050000245018 ENSGT00940000159451 ENSGT00940000157126.f ENSGT00390000002960.d ENSGT00940000159985 ENSGT00390000000083.b ENSGT00390000006659 ENSGT00940000175043 ENSGT00390000009588 ENSGT00940000159055 ENSGT00940000178266 ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000164937.a.b ENSGT00390000009255 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT01030000234954 ENSGT00960000186804 Yellowtail amberjack MODERN SPECIES 2686 TENT5D (ENSSLDG00000014810) ENSSLDG00000014679 npas2 (ENSSLDG00000014599) ENSSLDG00000014568 ENSSLDG00000014550 tbc1d8b (ENSSLDG00000014425) KIRREL3 (ENSSLDG00000014346) HLCS (ENSSLDG00000014325) ENSSLDG00000014306 riox2 (ENSSLDG00000014285) tiprl (ENSSLDG00000014256) ENSSLDG00000014209 AMOT (ENSSLDG00000014165) ENSSLDG00000014131 ENSSLDG00000014114 ENSSLDG00000014099 ##22 ENSSLDG00000014083 ENSSLDG00000014062 ENSSLDG00000014046 ENSSLDG00000014031 smfn (ENSSLDG00000014005) VASP (ENSSLDG00000013993) akt2l (ENSSLDG00000013950) ENSSLDG00000013922 ENSSLDG00000013904 CBLB (ENSSLDG00000013829) alcama (ENSSLDG00000013728) ENSSLDG00000013705 ZPLD1 (ENSSLDG00000013684) picalma (ENSSLDG00000013595) ENSSLDG00000013532 Greater amberjack MODERN SPECIES 139 chmp1b (ENSSDUG00000014560) TENT5D (ENSSDUG00000014579) BRWD3 (ENSSDUG00000014605) npas2 (ENSSDUG00000014830) ENSSDUG00000014948 tbc1d8b (ENSSDUG00000014998) ENSSDUG00000015085 KIRREL3 (ENSSDUG00000015095) ENSSDUG00000015131 HLCS (ENSSDUG00000015168) ENSSDUG00000015197 riox2 (ENSSDUG00000015220) ska2 (ENSSDUG00000015396) AMOT (ENSSDUG00000015419) ENSSDUG00000015534 ENSSDUG00000015549 ##22 ENSSDUG00000015554 ENSSDUG00000015566 ENSSDUG00000015589 ENSSDUG00000015607 smfn (ENSSDUG00000015624) VASP (ENSSDUG00000015642) akt2l (ENSSDUG00000015655) ENSSDUG00000015681 Barramundi perch MODERN SPECIES 301 HLCS (ENSLCAG00010013599) ENSLCAG00010013609 riox2 (ENSLCAG00010013617) tiprl (ENSLCAG00010013627) ENSLCAG00010013631 ENSLCAG00010013638 AMOT (ENSLCAG00010013648) PRRG3 (ENSLCAG00010013657) ripply1 (ENSLCAG00010013662) smfn (ENSLCAG00010013667) ENSLCAG00010013674 ENSLCAG00010013754 ENSLCAG00010014050 ##22 ENSLCAG00010014052 ENSLCAG00010014053 ENSLCAG00010014056 Ovalentaria ANCESTRAL SPECIES 11 ENSGT00940000161538 ENSGT00940000160946 ENSGT00940000159055 ENSGT00390000009588 ENSGT00390000006659 ENSGT00390000000083.b ENSGT00940000159985 ENSGT00390000002960.d ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00510000048522.i.b ENSGT00940000156631.B ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT01030000234954 ENSGT00960000186804 ENSGT00940000155156.b ENSGT00940000158592 ENSGT00940000153635.A Atherinomorphae ANCESTRAL SPECIES 88 ENSGT00940000156631.B ENSGT00510000048522.i.b ENSGT00940000157189.c ENSGT00940000156765.a.b ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F Oryzias ANCESTRAL SPECIES 14 ENSGT00940000160082.a.b ENSGT00950000182987.c.a.b.a ENSGT00390000017203 ENSGT00940000164330 ENSGT00940000174850 ENSGT00390000000378.d.a.o.a ENSGT00390000016675 ENSGT00550000074863 ENSGT00940000156881.h ENSGT00940000156631.B ENSGT00510000048522.i.b ENSGT00940000157189.c ENSGT00940000156765.a.b ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F ENSGT00940000165695 ENSGT00940000157881 ENSGT00940000156538.a ENSGT00940000157119.b ENSGT00940000153576.c.b.x ENSGT00940000174919 ENSGT00940000158517 ENSGT00390000000303 ENSGT00390000016055.`b ENSGT00940000155947.b ENSGT00390000000455.a ENSGT00940000155349.d ENSGT00950000183026.B.c.b ENSGT01100000263624 Oryzias_a ANCESTRAL SPECIES 2 ENSGT00940000160082.a.b ENSGT00950000182987.c.a.b.a ENSGT00390000017203 ENSGT00940000164330 ENSGT00940000174850 ENSGT00390000000378.d.a.o.a ENSGT00390000016675 ENSGT00550000074863 ENSGT00940000156881.h ENSGT00940000156631.B ENSGT00510000048522.i.b ENSGT00940000157189.c ENSGT00940000156765.a.b ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F ENSGT00940000165695 ENSGT00940000157881 ENSGT00940000156538.a ENSGT00940000157119.b ENSGT00940000153576.c.b.x ENSGT00940000158517 ENSGT00390000000303 ENSGT00390000016055.`b ENSGT00940000155947.b ENSGT00390000000455.a ENSGT00940000155349.d ENSGT01000000221581 ENSGT00950000183026.B.c.b ENSGT01030000234614.B.a.a.b.b.f Japanese Medaka HdrR MODERN SPECIES 5 pigs (ENSORLG00000005334) ENSORLG00000005314 ENSORLG00000005302 dynll2b (ENSORLG00000023822) heatr6 (ENSORLG00000030388) ddx52 (ENSORLG00000005241) ENSORLG00000005214 ENSORLG00000029594 ENSORLG00000025325 ENSORLG00000023768 ENSORLG00000022731 ENSORLG00000005180 ENSORLG00000005142 smfn (ENSORLG00000005119) ENSORLG00000005103 ENSORLG00000023937 ##22 ENSORLG00000005093 slc25a1a (ENSORLG00000025669) ENSORLG00000027049 nle1 (ENSORLG00000005086) INPP5K (ENSORLG00000005065) ENSORLG00000005047 slc43a2b (ENSORLG00000005019) HEPH (ENSORLG00000004967) tmem135 (ENSORLG00000004936) ENSORLG00000004903 cadm2a (ENSORLG00000004868) paxbp1 (ENSORLG00000004845) ENSORLG00000004815 ENSORLG00000023481 ENSORLG00000027079 Chinese medaka MODERN SPECIES 303 ENSOSIG00000015279 CBLB (ENSOSIG00000015212) ENSOSIG00000015209 akt2l (ENSOSIG00000015063) vaspa (ENSOSIG00000015061) smfn (ENSOSIG00000015041) ENSOSIG00000015039 ENSOSIG00000015038 ##22 ENSOSIG00000015036 slc25a1a (ENSOSIG00000015033) INPP5K (ENSOSIG00000014999) PITPNA (ENSOSIG00000014987) slc43a2b (ENSOSIG00000014474) ENSOSIG00000014466 tmem135 (ENSOSIG00000014459) cadm2a (ENSOSIG00000014083) paxbp1 (ENSOSIG00000014045) ENSOSIG00000012931 ENSOSIG00000012915 ENSOSIG00000012910 ENSOSIG00000012906 stoml3b (ENSOSIG00000012904) ENSOSIG00000012902 Oryzias_b ANCESTRAL SPECIES 13 ENSGT00940000160082.a.b ENSGT00950000182987.c.a.b.a ENSGT00390000017203 ENSGT00940000164330 ENSGT00940000174850 ENSGT00390000000378.d.a.o.a ENSGT00390000016675 ENSGT00550000074863 ENSGT00940000156881.h ENSGT00940000156631.B ENSGT00510000048522.i.b ENSGT00940000157189.c ENSGT00940000156765.a.b ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F ENSGT00940000165695 ENSGT00940000157881 ENSGT00940000156538.a ENSGT00940000157119.b ENSGT00940000153576.c.b.x ENSGT00940000174919 ENSGT00940000158517 ENSGT00390000000303 ENSGT00390000016055.`b ENSGT00390000016055.ab ENSGT00940000155947.b ENSGT00390000000455.a ENSGT00940000155349.d ENSGT00950000183026.B.c.b Javanese ricefish MODERN SPECIES 5 ENSOJAG00000013068 aldocb (ENSOJAG00000013186) pigs (ENSOJAG00000013322) ENSOJAG00000013332 dynll2b (ENSOJAG00000013356) ENSOJAG00000013363 ddx52 (ENSOJAG00000013479) ENSOJAG00000013888 ENSOJAG00000013903 CBLB (ENSOJAG00000014021) ENSOJAG00000014143 akt2l (ENSOJAG00000014170) ENSOJAG00000014260 smfn (ENSOJAG00000014278) ENSOJAG00000014288 ENSOJAG00000014297 ##22 ENSOJAG00000014355 slc25a1a (ENSOJAG00000014364) INPP5K (ENSOJAG00000014468) ENSOJAG00000014495 slc43a2b (ENSOJAG00000014507) ENSOJAG00000014589 ENSOJAG00000014855 tmem135 (ENSOJAG00000014882) cadm2a (ENSOJAG00000015943) paxbp1 (ENSOJAG00000016114) ENSOJAG00000016359 ENSOJAG00000016374 tmem50a (ENSOJAG00000016380) ENSOJAG00000016390 stoml3b (ENSOJAG00000016409) Indian medaka MODERN SPECIES 4 P2RY4 (ENSOMEG00000017491) inppl1b (ENSOMEG00000017462) arr3b (ENSOMEG00000017310) RAB41 (ENSOMEG00000017258) stard14 (ENSOMEG00000017176) pdzd11 (ENSOMEG00000017148) ENSOMEG00000017094 ENSOMEG00000017028 ENSOMEG00000017022 ENSOMEG00000016988 ENSOMEG00000016961 akt2l (ENSOMEG00000016938) ENSOMEG00000016892 smfn (ENSOMEG00000016878) ENSOMEG00000016847 ENSOMEG00000016811 ##22 ENSOMEG00000016794 ENSOMEG00000016778 slc25a1a (ENSOMEG00000016746) nle1 (ENSOMEG00000016717) INPP5K (ENSOMEG00000016657) ENSOMEG00000016598 ENSOMEG00000016591 ENSOMEG00000016566 tmem135 (ENSOMEG00000016426) ENSOMEG00000016307 ENSOMEG00000016250 cadm2a (ENSOMEG00000016213) paxbp1 (ENSOMEG00000016109) ENSOMEG00000016059 tmem50a (ENSOMEG00000015983) Ovalentaria_B ANCESTRAL SPECIES 26 ENSGT00940000156631.B ENSGT00510000048522.i.b ENSGT00940000157189.c ENSGT00940000156765.a.b ENSGT00940000159359 ENSGT00940000161538 ENSGT00940000160946 ENSGT00940000159055 ENSGT00390000009588 ENSGT00390000006659 ENSGT00390000000083.b ENSGT00940000159985 ENSGT00390000002960.d ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F Cichlidae ANCESTRAL SPECIES 4 ENSGT00940000156881.h ENSGT00940000156527.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT01030000234954 ENSGT00960000186804 ENSGT00940000155156.b ENSGT00940000159055 ENSGT00390000009588 ENSGT00390000006659 ENSGT00390000000083.b ENSGT00940000159985 ENSGT00390000002960.d ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F Pseudocrenilabrinae ANCESTRAL SPECIES 56 ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT01030000234954 ENSGT00960000186804 ENSGT00940000155156.b ENSGT00940000159055 ENSGT00390000009588 ENSGT00390000006659 ENSGT00390000000083.b ENSGT00940000159985 ENSGT00390000002960.d ENSGT00390000009255.e ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F Pseudocrenilabrinae_A ANCESTRAL SPECIES 59 ENSGT00940000166102 ENSGT00390000009724.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT01030000234954 ENSGT00960000186804 ENSGT00940000155156.b ENSGT00940000159055 ENSGT00390000009588 ENSGT00390000006659 ENSGT00390000000083.b ENSGT00940000159985 ENSGT00390000002960.d.d ENSGT00390000009255.e ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F Haplochromini ANCESTRAL SPECIES 36 ENSGT00390000009724.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT01030000234954 ENSGT00960000186804 ENSGT00940000155156.b ENSGT00940000159055 ENSGT00390000009588.tb ENSGT00390000006659 ENSGT00390000000083.b ENSGT00940000159985 ENSGT00390000002960.d.c ENSGT00390000002960.d.d ENSGT00390000009255.e ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F.f Haplochromini_A ANCESTRAL SPECIES 41 ENSGT00940000166102 ENSGT00390000009724.c ENSGT00950000183068.a.b.c ENSGT00940000155843 ENSGT01030000234954 ENSGT00960000186804 ENSGT00940000155156.b ENSGT00940000159055 ENSGT00390000009588.tb ENSGT00390000006659 ENSGT00390000000083.b ENSGT00940000159985 ENSGT00390000002960.d.c ENSGT00390000009255.e ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F.f P. nyererei MODERN SPECIES 826 ENSPNYG00000013830 ##22 ENSPNYG00000013851 Haplochromini_B ANCESTRAL SPECIES 46 ENSGT00390000005976.a.a.b ENSGT00940000153556.B ENSGT00940000162978.a.a.b ENSGT00940000166102 ENSGT00390000009724.c ENSGT00950000183068.a.b.c ENSGT00940000155156.b ENSGT00940000159055 ENSGT00390000009588.tb ENSGT00390000006659 ENSGT00390000000083.b ENSGT00940000159985 ENSGT00390000002960.d.c ENSGT00390000009255.e ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F.f Eastern happy MODERN SPECIES 1 ENSACLG00000024988 ENSACLG00000024983 dlg2 (ENSACLG00000024804) ENSACLG00000024798 AMOT (ENSACLG00000024757) ska2 (ENSACLG00000024734) tiprl (ENSACLG00000024710) riox2 (ENSACLG00000024673) ENSACLG00000024652 ENSACLG00000024624 HLCS (ENSACLG00000024603) smfn (ENSACLG00000024566) ENSACLG00000024552 ENSACLG00000024534 ENSACLG00000024522 ENSACLG00000024506 ##22 ENSACLG00000024475 ENSACLG00000024445 ENSACLG00000024427 ENSACLG00000024413 Zebra mbuna MODERN SPECIES 1092 camkk1a (ENSMZEG00005023284) ATP2A3 (ENSMZEG00005023279) ZZEF1 (ENSMZEG00005023273) cyb5d2 (ENSMZEG00005023271) ankfy1 (ENSMZEG00005023269) ENSMZEG00005023268 ube2g1a (ENSMZEG00005023267) spns3 (ENSMZEG00005023266) SPNS2 (ENSMZEG00005023264) ruvbl2 (ENSMZEG00005023261) ftr83 (ENSMZEG00005023260) ftr82 (ENSMZEG00005023259) atp5l (ENSMZEG00005023258) PICALM (ENSMZEG00005023256) ENSMZEG00005023254 ENSMZEG00005023253 ##22 ENSMZEG00005023250 ENSMZEG00005023247 riox2 (ENSMZEG00005023244) tiprl (ENSMZEG00005023243) ska2 (ENSMZEG00005023240) AMOT (ENSMZEG00005023238) dlg2 (ENSMZEG00005023233) ENSMZEG00005023228 ENSMZEG00005023227 ENSMZEG00005023225 smfn (ENSMZEG00005023224) HLCS (ENSMZEG00005023222) ENSMZEG00005023220 ENSMZEG00005022998 riox2 (ENSMZEG00005022994) Burton s mouthbrooder MODERN SPECIES 1245 ENSHBUG00000007951 ENSHBUG00000007942 ##22 Lyretail cichlid MODERN SPECIES 460 atp5l (ENSNBRG00000007086) ENSNBRG00000007073 ENSNBRG00000006990 ENSNBRG00000006976 ENSNBRG00000006952 ENSNBRG00000006942 ENSNBRG00000006920 ENSNBRG00000006876 ENSNBRG00000006799 tiprl (ENSNBRG00000006750) riox2 (ENSNBRG00000006715) ENSNBRG00000006689 HLCS (ENSNBRG00000006584) smfn (ENSNBRG00000006529) ENSNBRG00000006511 ENSNBRG00000006490 ##22 ENSNBRG00000006473 ENSNBRG00000006450 ENSNBRG00000006432 ENSNBRG00000006384 Nile tilapia MODERN SPECIES 1 c1qbp (ENSONIG00000017477) ENSONIG00000042705 ENSONIG00000039758 PICALM (ENSONIG00000004669) ENSONIG00000037775 ENSONIG00000004678 ENSONIG00000029898 dlg2 (ENSONIG00000004683) HLCS (ENSONIG00000017473) ENSONIG00000017476 riox2 (ENSONIG00000007950) tiprl (ENSONIG00000036360) ska2 (ENSONIG00000007945) AMOT (ENSONIG00000007942) ENSONIG00000028919 ENSONIG00000033333 ##22 ENSONIG00000033831 ENSONIG00000039227 ENSONIG00000028214 Midas cichlid MODERN SPECIES 747 ENSACIG00000023098 ENSACIG00000023090 ##22 ENSACIG00000023085 ENSACIG00000023076 Pomacentridae ANCESTRAL SPECIES 164 ENSGT00940000156881.h ENSGT00940000156631.B ENSGT00510000048522.i.b ENSGT00940000157189.c ENSGT00940000156765.a.b ENSGT00940000159359 ENSGT00940000161538 ENSGT00940000160946 ENSGT00940000159055 ENSGT00390000009588 ENSGT00390000006659 ENSGT00940000159985 ENSGT00390000002960.d ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F Pomacentridae_A ANCESTRAL SPECIES 286 ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F Amphiprion ANCESTRAL SPECIES 278 ENSGT00940000164937.a.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000177367 ENSGT01030000234517.F ENSGT00390000009255 ENSGT00390000002960.d ENSGT00940000159985 ENSGT00390000009588 ENSGT00390000006659 Clown anemonefish MODERN SPECIES 2615 ENSAOCG00000006406 ##22 ENSAOCG00000006424 Orange clownfish MODERN SPECIES 6 ENSAPEG00000013140 hpda (ENSAPEG00000013058) MTMR4 (ENSAPEG00000012940) ca4a (ENSAPEG00000012858) ENSAPEG00000012846 alcama (ENSAPEG00000012831) ENSAPEG00000012776 ENSAPEG00000012718 ENSAPEG00000012698 akt2l (ENSAPEG00000012650) ENSAPEG00000012630 ENSAPEG00000012604 ENSAPEG00000012595 ENSAPEG00000012575 ENSAPEG00000012553 ENSAPEG00000012532 ##22 ENSAPEG00000012459 ENSAPEG00000012446 smfn (ENSAPEG00000012435) HLCS (ENSAPEG00000012399) ENSAPEG00000012375 ENSAPEG00000012361 ENSAPEG00000012261 ENSAPEG00000012238 tiprl (ENSAPEG00000012195) AMOT (ENSAPEG00000012171) sc5d (ENSAPEG00000012101) plekhb1 (ENSAPEG00000012090) TBCEL (ENSAPEG00000012084) TECTA (ENSAPEG00000011945) ENSAPEG00000011897 Bicolor damselfish MODERN SPECIES 416 ENSSPAG00000001784 akt2l (ENSSPAG00000001740) ENSSPAG00000001716 ENSSPAG00000001700 ripply1 (ENSSPAG00000001687) PRRG3 (ENSSPAG00000001673) AMOT (ENSSPAG00000001653) ska2 (ENSSPAG00000001644) tiprl (ENSSPAG00000001597) ENSSPAG00000001582 HLCS (ENSSPAG00000001558) smfn (ENSSPAG00000001530) ENSSPAG00000001509 ENSSPAG00000001501 ##22 ENSSPAG00000001481 ENSSPAG00000001455 ENSSPAG00000001439 dlg2 (ENSSPAG00000001352) BBX (ENSSPAG00000001301) vps11 (ENSSPAG00000001005) hyou1 (ENSSPAG00000000960) ENSSPAG00000000902 hist2h2l (ENSSPAG00000000886) h2ax1 (ENSSPAG00000000703) ENSSPAG00000000657 ENSSPAG00000000648 ENSSPAG00000000641 hspa8 (ENSSPAG00000000611) bsx (ENSSPAG00000000590) Pinecone sodierfish MODERN SPECIES 5 castor2 (ENSMMDG00005008253) DOC2B (ENSMMDG00005008230) ENSMMDG00005008223 tmem248 (ENSMMDG00005008217) lig3 (ENSMMDG00005004307) rad51d (ENSMMDG00005003981) tmem132e (ENSMMDG00005003826) dtx2 (ENSMMDG00005003811) GTF2IRD1 (ENSMMDG00005003802) CLIP2 (ENSMMDG00005003765) ENSMMDG00005003753 KIRREL3 (ENSMMDG00005003613) smfn (ENSMMDG00005003502) ENSMMDG00005003484 GRAMD1B (ENSMMDG00005003035) ENSMMDG00005003004 ##22 ENSMMDG00005002997 ENSMMDG00005002990 ENSMMDG00005002977 ENSMMDG00005002970 akt2l (ENSMMDG00005002889) ENSMMDG00005002862 CBLB (ENSMMDG00005002829) alcama (ENSMMDG00005002424) ZPLD1 (ENSMMDG00005002408) picalma (ENSMMDG00005002360) ENSMMDG00005002345 dlg2 (ENSMMDG00005002196) BBX (ENSMMDG00005002185) vps11 (ENSMMDG00005001933) slc8a2a (ENSMMDG00005001268) Otomorpha ANCESTRAL SPECIES 25 ENSGT00940000178743 ENSGT00940000167170 ENSGT00940000157165.e.b ENSGT00950000182942.b.e ENSGT00390000018633 ENSGT00940000156655 ENSGT00390000006114 ENSGT00940000166058 ENSGT00390000003924 ENSGT00990000203615.b.b.a ENSGT00950000182818.C.b ENSGT00940000157126.f ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00390000017608.k.b ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00390000008657 ENSGT00390000009554 ENSGT00940000163875.a.b.b ENSGT00940000161093 ENSGT01030000234556.a.b.a ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a Otophysi ANCESTRAL SPECIES 70 ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00390000008657 ENSGT00390000009554 ENSGT00940000163875.a.b.b ENSGT00940000161093 ENSGT01030000234556.a.b.a ENSGT00500000044950 ENSGT00940000160202 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b ENSGT01080000257365.b.a.b.a.a ENSGT00940000157408.a.a Characiphysae ANCESTRAL SPECIES 46 ENSGT00390000011084 ENSGT00940000166580 ENSGT00940000157199 ENSGT00940000159206.a ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00940000155742.a.a ENSGT00950000183158.E ENSGT00940000161073 ENSGT00940000159700 ENSGT00390000006753.B ENSGT00530000063851.b ENSGT01050000244857.C.b ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00950000183182.b ENSGT00940000154335.a ENSGT00940000164070.b ENSGT00390000013335 ENSGT00390000017209 ENSGT00730000111188 ENSGT01030000234614.B.a.a.b.b ENSGT00950000183096.a.a.c.b.f ENSGT00950000183026.B.c.b ENSGT00950000183026.A.b ENSGT00940000155349.d ENSGT00390000000455.a Channel catfish MODERN SPECIES 7 March3 (ENSIPUG00000003042) C5orf63 (ENSIPUG00000003056) megf10 (ENSIPUG00000003071) prrc1 (ENSIPUG00000003138) ctxn3 (ENSIPUG00000003158) slc12a2 (ENSIPUG00000003171) FBN2 (ENSIPUG00000003277) SLC27A3 (ENSIPUG00000003359) slc27a6 (ENSIPUG00000003380) isoc1 (ENSIPUG00000003402) MINAR2 (ENSIPUG00000003412) Chsy3 (ENSIPUG00000003424) ENSIPUG00000003429 ENSIPUG00000003456 hint1 (ENSIPUG00000003460) Dact1 (ENSIPUG00000003484) ##22 dmpk (ENSIPUG00000003505) ENSIPUG00000003545 vaspa (ENSIPUG00000003551) smpd1 (ENSIPUG00000003567) tpte (ENSIPUG00000003580) fgl1b (ENSIPUG00000003711) ENSIPUG00000003716 ENSIPUG00000003721 vps36 (ENSIPUG00000003738) proser1 (ENSIPUG00000003804) stoml3b (ENSIPUG00000003815) ENSIPUG00000003837 ENSIPUG00000003844 SLC7A1 (ENSIPUG00000003864) paxbp1 (ENSIPUG00000003919) Characiphysae_b ANCESTRAL SPECIES 19 ENSGT00390000011084 ENSGT00940000166580 ENSGT00940000157199 ENSGT00940000159206.a ENSGT00390000014940 ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00940000155742.a.a ENSGT00950000183158.E ENSGT00940000161073 ENSGT00940000159700 ENSGT00390000006753.B ENSGT00530000063851.b ENSGT01050000244857.C.b ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000181485 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00950000183182.b ENSGT00940000154335.a ENSGT00940000164070.b ENSGT00390000013335 ENSGT00390000017209 ENSGT00730000111188 ENSGT01030000234614.B.a.a.b.b ENSGT00950000183096.a.a.c.b.f ENSGT00950000183026.B.c.b ENSGT00950000183026.A.b ENSGT00940000155349.d Characoidei ANCESTRAL SPECIES 11 ENSGT00940000157199 ENSGT00940000159206.a ENSGT00390000014940 ENSGT00390000005764.ab ENSGT00940000157703 ENSGT00390000003837 ENSGT00940000154412.A ENSGT00940000155742.a.a ENSGT00950000183158.E ENSGT00940000161073 ENSGT00940000159700 ENSGT00390000006753.B ENSGT00530000063851.b ENSGT01050000244857.C.b ENSGT00940000154451 ENSGT00950000183181.B.b.l.a ##22 ENSGT00940000181485 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00950000183182.b ENSGT00940000154335.a ENSGT00940000164070.b ENSGT00390000013335 ENSGT00390000017209 ENSGT00730000111188 ENSGT01030000234614.B.a.a.b.b ENSGT00950000183096.a.a.c.b.f ENSGT00950000183026.B.c.b ENSGT00950000183026.A.b ENSGT00940000155349.d Red-bellied piranha MODERN SPECIES 18 hspa8 (ENSPNAG00000019353) ENSPNAG00000019375 ENSPNAG00000019387 ENSPNAG00000019420 megf10 (ENSPNAG00000019492) prrc1 (ENSPNAG00000019521) CTXN3 (ENSPNAG00000003596) slc12a2 (ENSPNAG00000019742) FBN2 (ENSPNAG00000019919) SLC27A3 (ENSPNAG00000019938) slc27a6 (ENSPNAG00000019955) isoc1 (ENSPNAG00000019981) ENSPNAG00000020000 chsy3 (ENSPNAG00000020022) HINT1 (ENSPNAG00000020038) ENSPNAG00000003618 ##22 ENSPNAG00000020056 ENSPNAG00000020066 ENSPNAG00000020075 vaspa (ENSPNAG00000020092) Mexicana tetra MODERN SPECIES 12 ENSAMXG00000036816 lmnb1 (ENSAMXG00000012973) ENSAMXG00000038292 C5orf63 (ENSAMXG00000013058) ENSAMXG00000033000 megf10 (ENSAMXG00000013065) prrc1 (ENSAMXG00000013106) CTXN3 (ENSAMXG00000043032) slc12a2 (ENSAMXG00000013233) SLC27A3 (ENSAMXG00000014872) slc27a6 (ENSAMXG00000014881) isoc1 (ENSAMXG00000032639) ENSAMXG00000031602 chsy3 (ENSAMXG00000014905) HINT1 (ENSAMXG00000039321) ENSAMXG00000014928 ##22 ENSAMXG00000036019 ENSAMXG00000014929 ENSAMXG00000014943 vaspa (ENSAMXG00000014962) smpd1 (ENSAMXG00000032390) tpte (ENSAMXG00000029925) fgl1b (ENSAMXG00000015411) ENSAMXG00000036415 ENSAMXG00000031548 vps36 (ENSAMXG00000015596) ENSAMXG00000015690 stoml3b (ENSAMXG00000043835) ENSAMXG00000015789 ENSAMXG00000029515 ENSAMXG00000015862 Electric eel MODERN SPECIES 253 CTXN3 (ENSEEEG00000019492) slc12a2 (ENSEEEG00000017667) FBN2 (ENSEEEG00000017548) ENSEEEG00000017485 slc27a6 (ENSEEEG00000017477) isoc1 (ENSEEEG00000017469) ENSEEEG00000017468 chsy3 (ENSEEEG00000017467) hint1 (ENSEEEG00000017465) DACT3 (ENSEEEG00000017464) ##22 ENSEEEG00000017463 ENSEEEG00000017462 ENSEEEG00000017459 vaspa (ENSEEEG00000017456) smpd1 (ENSEEEG00000017452) tpte (ENSEEEG00000017429) fgl1b (ENSEEEG00000017426) ENSEEEG00000017414 vps36 (ENSEEEG00000017403) ENSEEEG00000017400 stoml3b (ENSEEEG00000017398) ENSEEEG00000017395 ENSEEEG00000017370 SLC7A1 (ENSEEEG00000017364) paxbp1 (ENSEEEG00000017357) Cyprinoidei ANCESTRAL SPECIES 137 ENSGT00800000124150 ENSGT00390000015433 ENSGT00950000182993.A.b.e ENSGT01100000263502.B.a.b.a ENSGT00940000155292.db.b ENSGT00940000155919.b.b ENSGT00950000182815.a.a.a.a.a.c.a ENSGT00940000156896 ENSGT01050000244879.a.a.b ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT01070000253744.b.a.a.a.a ENSGT00940000157027.n.b ENSGT00940000158044.b ENSGT00530000063811.B.b ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00940000156765.a.b ENSGT00940000157189.c ENSGT00390000008657 ENSGT00390000009554 ENSGT00940000163875.a.b.b ENSGT00940000170277 ENSGT01030000234556.a.b.a ENSGT00500000044950 ENSGT00940000167160 ENSGT00940000160662 ENSGT00990000203615.b.a.a.a.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 341 ENSGT01100000263502.B.a.b.a.a ENSGT00940000155292.db.b.d ENSGT00940000155919.b.b.e ENSGT00950000182815.a.a.a.a.a.c.a.b ENSGT00940000156896.a ENSGT01050000244879.a.a.b.a ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT01070000253744.b.a.a.a.a ENSGT00940000157027.n.b.e ENSGT00940000157027.n.b.f ENSGT00940000158044.b ENSGT00530000063811.B.b.a ENSGT00950000183181.B.b.l.a.e ##22 ENSGT01030000234517.F.a ENSGT00940000159359.p ENSGT00940000156765.a.b.f ENSGT00940000157189.c ENSGT00390000008657 ENSGT00390000009554.e ENSGT00940000163875.a.b.b ENSGT01030000234556.a.b.a.e.a ENSGT00500000044950 ENSGT00940000167160 ENSGT00940000160662.g.a ENSGT01080000257365.b.a.b.a.a.f.b ENSGT00730000111429 ENSGT00390000013771 ENSGT00940000154465.C Goldfish DUPLICATION Goldfish MODERN SPECIES 28 ENSCARG00000041772 ##22 ENSCARG00000041749 ENSCARG00000041719 vaspa (ENSCARG00000041706) ENSCARG00000041690 emsy (ENSCARG00000041646) ENSCARG00000041634 ENSCARG00000041631 ENSCARG00000041618 mpzl1l (ENSCARG00000041605) ets2 (ENSCARG00000041594) BMP10 (ENSCARG00000041569) npffr1l3 (ENSCARG00000041530) ARVCF (ENSCARG00000041515) ENSCARG00000041503 ENSCARG00000041495 Goldfish MODERN SPECIES 28 ENSCARG00000041749 ENSCARG00000041719 vaspa (ENSCARG00000041706) ENSCARG00000041690 emsy (ENSCARG00000041646) ENSCARG00000041634 ENSCARG00000041631 ENSCARG00000041618 mpzl1l (ENSCARG00000041605) ets2 (ENSCARG00000041594) BMP10 (ENSCARG00000041569) npffr1l3 (ENSCARG00000041530) ARVCF (ENSCARG00000041515) ENSCARG00000041503 ENSCARG00000041495 ENSCARG00000041474 ##22 ENSCARG00000041462 ENSCARG00000041430 vaspa (ENSCARG00000041404) ENSCARG00000041255 emsy (ENSCARG00000041238) ENSCARG00000041198 ENSCARG00000041179 ENSCARG00000041116 tiprl (ENSCARG00000041090) HLCS (ENSCARG00000041072) dyrk1aa (ENSCARG00000040952) ENSCARG00000040934 KCNJ6 (ENSCARG00000040905) KCNJ15 (ENSCARG00000040897) erg (ENSCARG00000040878) Cyprininae_a ANCESTRAL SPECIES 492 ENSGT01100000263502.B.a.b.a.a ENSGT00940000155292.db.b.d ENSGT00940000155919.b.b.e ENSGT00950000182815.a.a.a.a.a.c.a.b ENSGT00940000156896.a ENSGT01050000244879.a.a.b.a ENSGT00940000157435.a.b ENSGT00940000156279.f ENSGT01070000253744.b.a.a.a.a ENSGT00940000157027.n.b.e ENSGT00940000157027.n.b.f ENSGT00940000158044.b ENSGT00530000063811.B.b.a ENSGT00950000183181.B.b.l.a.e ##22 ENSGT01030000234517.F.a Common carp reference MODERN SPECIES 32 ENSCCRG00000009055 ENSCCRG00000067347 ENSCCRG00000009051 opn4xa (ENSCCRG00000009048) pdlim5b (ENSCCRG00000059606) bmpr1bb (ENSCCRG00000008248) UNC5C (ENSCCRG00000076525) glis3 (ENSCCRG00000024813) rfx3 (ENSCCRG00000035878) smad4a (ENSCCRG00000013106) ENSCCRG00000056292 npffr1l3 (ENSCCRG00000016302) ENSCCRG00000035795 ENSCCRG00000058451 ENSCCRG00000075108 ENSCCRG00000064876 ##22 ENSCCRG00000080391 ENSCCRG00000072512 vaspa (ENSCCRG00000082689) emsy (ENSCCRG00000009945) ENSCCRG00000018264 ENSCCRG00000014187 mpzl1l (ENSCCRG00000014154) ets2 (ENSCCRG00000048007) KCNJ15 (ENSCCRG00000052917) erg (ENSCCRG00000034863) ENSCCRG00000042405 ripply3 (ENSCCRG00000031695) ENSCCRG00000073723 dyrk1aa (ENSCCRG00000008212) ENSCCRG00000031698 Cyprininae ANCESTRAL SPECIES 853 ENSGT00390000016767.l ENSGT00530000063811.B.b.b ENSGT00950000183181.B.b.l.a.f ##22 ENSGT01060000253732 ENSGT01030000234517.F.b ENSGT00940000159359.q ENSGT00940000156765.a.b.e Goldfish DUPLICATION Goldfish MODERN SPECIES 1 psmg1 (ENSCARG00000010226) mpzl1l (ENSCARG00000010238) ENSCARG00000010247 ENSCARG00000010249 opn4xa (ENSCARG00000010254) gdnfa (ENSCARG00000010265) WDR70 (ENSCARG00000010290) ENSCARG00000001935 pdlim5b (ENSCARG00000001974) ENSCARG00000002054 ENSCARG00000002059 ENSCARG00000002064 ENSCARG00000002083 ANKLE2 (ENSCARG00000002132) ENSCARG00000002154 ENSCARG00000002173 ##22 ENSCARG00000002188 vaspa (ENSCARG00000002203) akt2l (ENSCARG00000002228) emsy (ENSCARG00000002289) ENSCARG00000002337 ENSCARG00000002343 ENSCARG00000002349 mpzl1l (ENSCARG00000002360) psmg1 (ENSCARG00000002379) ets2 (ENSCARG00000002399) erg (ENSCARG00000002414) KCNJ6 (ENSCARG00000002421) pigp (ENSCARG00000002431) npffr1l3 (ENSCARG00000002443) smad4a (ENSCARG00000002461) Goldfish MODERN SPECIES 1 ENSCARG00000005164 ENSCARG00000005170 or42b1 (ENSCARG00000005177) ENSCARG00000005179 ENSCARG00000005183 riox2 (ENSCARG00000005190) ENSCARG00000005200 dyrk1aa (ENSCARG00000005235) vps26c (ENSCARG00000005463) rfx3 (ENSCARG00000005482) smad4a (ENSCARG00000005529) npffr1l3 (ENSCARG00000005630) ARVCF (ENSCARG00000005640) ENSCARG00000005650 FAM222A (ENSCARG00000005655) ENSCARG00000005659 ##22 ENSCARG00000005661 ENSCARG00000005668 ENSCARG00000005672 akt2l (ENSCARG00000005681) ENSCARG00000005738 ENSCARG00000005810 triap1 (ENSCARG00000007646) srsf9 (ENSCARG00000007654) GAL3ST1 (ENSCARG00000007656) epb41l4a (ENSCARG00000007680) apc (ENSCARG00000007827) ENSCARG00000007977 ENSCARG00000007979 dyrk1aa (ENSCARG00000007989) ENSCARG00000008091 Cyprininae_a ANCESTRAL SPECIES 904 ENSGT00390000016767.l ENSGT00530000063811.B.b.b ENSGT00950000183181.B.b.l.a.f ##22 Common carp reference MODERN SPECIES 24 ENSCCRG00000078953 gdnfa (ENSCCRG00000058888) opn4xa (ENSCCRG00000044217) pdlim5b (ENSCCRG00000008930) bmpr1bb (ENSCCRG00000035315) UNC5C (ENSCCRG00000035330) ENSCCRG00000055442 glis3 (ENSCCRG00000010962) smad4a (ENSCCRG00000024119) ENSCCRG00000024172 rfx3 (ENSCCRG00000021805) npffr1l3 (ENSCCRG00000078439) ENSCCRG00000053115 ENSCCRG00000064426 ENSCCRG00000060351 ENSCCRG00000021475 ##22 si:ch1073-303d10.1 (ENSCCRG00000064626) ENSCCRG00000005334 ENSCCRG00000005331 vaspa (ENSCCRG00000079511) akt2l (ENSCCRG00000003577) ENSCCRG00000063205 emsy (ENSCCRG00000014133) ENSCCRG00000064256 mpzl1l (ENSCCRG00000061608) psmg1 (ENSCCRG00000081878) ets2 (ENSCCRG00000019206) ripply3 (ENSCCRG00000054052) ENSCCRG00000031293 pigp (ENSCCRG00000076825) TTC3 (ENSCCRG00000031331) Zebrafish MODERN SPECIES 1 KCNJ15 (ENSDARG00000058988) erg (ENSDARG00000077304) ets2 (ENSDARG00000103980) psmg1 (ENSDARG00000040620) mpzl1l (ENSDARG00000059048) ENSDARG00000063577 ENSDARG00000040621 emsy (ENSDARG00000059059) NHLRC3 (ENSDARG00000102127) akt2l (ENSDARG00000103612) vaspa (ENSDARG00000099690) ENSDARG00000100197 ENSDARG00000074914 si:ch1073-303d10.1 (ENSDARG00000103006) FAM222A (ENSDARG00000087585) ENSDARG00000087910 ##22 ENSDARG00000042872 ARVCF (ENSDARG00000074329) ENSDARG00000095223 npffr1l3 (ENSDARG00000010712) BMP10 (ENSDARG00000109233) smad4a (ENSDARG00000075226) ENSDARG00000110346 rfx3 (ENSDARG00000014550) glis3 (ENSDARG00000069726) UNC5C (ENSDARG00000087341) bmpr1bb (ENSDARG00000102742) pdlim5b (ENSDARG00000027600) opn4xa (ENSDARG00000079129) gdnfa (ENSDARG00000039959) WDR70 (ENSDARG00000109022) Clupeiformes ANCESTRAL SPECIES 264 ENSGT00530000064267 ENSGT00940000167170 ENSGT00940000157165.e.b ENSGT00950000182942.b.e ENSGT00390000018633 ENSGT00940000156655 ENSGT00390000006114 ENSGT00940000166058 ENSGT00390000003924 ENSGT00990000203615.b.b.a ENSGT00950000182818.C.b ENSGT00940000157126.f ENSGT00390000009255 ENSGT00940000164937.a.b ENSGT00940000156649.c.b ENSGT00950000183181.B.b.l.a ##22 ENSGT01030000234517.F ENSGT00940000159359 ENSGT00390000017608.k.b Denticle herring MODERN SPECIES 16 dcps (ENSDCDG00000021707) dcps (ENSDCDG00000021701) kcnj1b (ENSDCDG00000021696) smtlb (ENSDCDG00000021054) cry5 (ENSDCDG00000020968) dcps (ENSDCDG00000020947) kcnj1b (ENSDCDG00000020896) dcps (ENSDCDG00000020883) kcnj1b (ENSDCDG00000020876) smtlb (ENSDCDG00000020486) KIRREL3 (ENSDCDG00000017035) ENSDCDG00000016976 smfn (ENSDCDG00000016975) ENSDCDG00000016971 GRAMD1B (ENSDCDG00000014395) ENSDCDG00000014132 ##22 ENSDCDG00000014114 ENSDCDG00000014093 ENSDCDG00000014078 ENSDCDG00000014066 snrpd2 (ENSDCDG00000013927) ANGPTL5 (ENSDCDG00000013893) birc2 (ENSDCDG00000013873) ENSDCDG00000013805 pcf11 (ENSDCDG00000013791) ccdc90b (ENSDCDG00000013783) alg8 (ENSDCDG00000013777) guca1d (ENSDCDG00000013774) rb1 (ENSDCDG00000013751) ccdc61 (ENSDCDG00000013740) ENSDCDG00000013736 Osteoglossocephalai ANCESTRAL SPECIES 303 ENSGT00940000180218 ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00990000204162 ENSGT00940000161006 ENSGT00940000160678.a ENSGT00390000017608 ENSGT00940000156765.a.a ENSGT00940000157189 ENSGT00920000149201 ENSGT00510000048522.i.a ENSGT00940000165006 ENSGT00390000011517.a.b Clupeocephala ANCESTRAL SPECIES 185 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00990000204162 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00940000157189.d ENSGT00920000149201 ENSGT00510000048522.i.a ENSGT00940000165006 ENSGT00390000011517.a.b ENSGT00940000162662 ENSGT00410000028333 Euteleosteomorpha ANCESTRAL SPECIES 7 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00990000204162 ENSGT00550000075063 ENSGT00390000017608.k.b ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b ENSGT00950000183171.B Acanthomorphata ANCESTRAL SPECIES 37 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 Euacanthomorphacea ANCESTRAL SPECIES 8 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00940000181074 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 Percomorphaceae ANCESTRAL SPECIES 8 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00940000181074 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 Tiger tail seahorse MODERN SPECIES 111 ilvbl (ENSHCOG00000000335) FAM118B (ENSHCOG00000010703) SRPRA (ENSHCOG00000010749) st3gal4 (ENSHCOG00000010759) KCNJ5 (ENSHCOG00000010771) kcnj1a.6 (ENSHCOG00000010775) fli1 (ENSHCOG00000010788) ets1 (ENSHCOG00000010814) smtla (ENSHCOG00000010818) KIRREL3 (ENSHCOG00000010846) BARX2 (ENSHCOG00000010857) ENSHCOG00000010866 ENSHCOG00000010883 ENSHCOG00000010892 ENSHCOG00000010931 ENSHCOG00000010938 ##22 C5AR1 (ENSHCOG00000010952) ENSHCOG00000010958 polr2i (ENSHCOG00000010967) snrpd2 (ENSHCOG00000010973) ENSHCOG00000010978 ENSHCOG00000010991 cltcb (ENSHCOG00000011070) cfap45 (ENSHCOG00000011098) trappc4 (ENSHCOG00000011115) rps25 (ENSHCOG00000011130) slc37a4a (ENSHCOG00000011159) trappc4 (ENSHCOG00000011182) rps25 (ENSHCOG00000011191) sgcg (ENSHCOG00000011196) SACS (ENSHCOG00000011214) Percomorphaceae_B ANCESTRAL SPECIES 13 ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00940000180218 ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00940000181074 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000177608 ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 Ovalentaria ANCESTRAL SPECIES 8 ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00940000180218 ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Atherinomorphae ANCESTRAL SPECIES 15 ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00940000180218 ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Cyprinodontiformes ANCESTRAL SPECIES 12 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856.v ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Aplocheiloidei ANCESTRAL SPECIES 50 ENSGT00940000158035 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856.v ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Mangrove rivulus MODERN SPECIES 51 ilvbl (ENSKMAG00000002301) FAM118B (ENSKMAG00000002291) SRPRA (ENSKMAG00000002280) TIRAP (ENSKMAG00000002266) st3gal4 (ENSKMAG00000002232) KCNJ5 (ENSKMAG00000002202) kcnj1a.6 (ENSKMAG00000002182) fli1 (ENSKMAG00000002149) ets1 (ENSKMAG00000002121) smtla (ENSKMAG00000002072) KIRREL3 (ENSKMAG00000001972) BARX2 (ENSKMAG00000001926) ENSKMAG00000001899 ENSKMAG00000001888 GRAMD1B (ENSKMAG00000001711) ENSKMAG00000001631 ##22 C5AR1 (ENSKMAG00000001625) ENSKMAG00000001604 polr2i (ENSKMAG00000001567) pglyrp5 (ENSKMAG00000001559) snrpd2 (ENSKMAG00000001539) VASP (ENSKMAG00000001516) cltcb (ENSKMAG00000001324) cfap45 (ENSKMAG00000001182) slc37a4a (ENSKMAG00000001121) trappc4 (ENSKMAG00000001096) rps25 (ENSKMAG00000001088) sgcg (ENSKMAG00000001046) SACS (ENSKMAG00000000970) tnfrsf19 (ENSKMAG00000000938) MIPEP (ENSKMAG00000000843) Turquoise killifish MODERN SPECIES 1615 st3gal4 (ENSNFUG00015004662) ENSNFUG00015004660 KCNJ5 (ENSNFUG00015004658) kcnj1a.6 (ENSNFUG00015004656) fli1 (ENSNFUG00015004641) ENSNFUG00015004630 ENSNFUG00015004626 bnipl (ENSNFUG00015004621) PRUNE (ENSNFUG00015004617) ENSNFUG00015004614 ENSNFUG00015004610 KIRREL3 (ENSNFUG00015004336) CLMP (ENSNFUG00015004199) NANOS2 (ENSNFUG00015004194) GRAMD1B (ENSNFUG00015003919) DACT3 (ENSNFUG00015003848) ##22 C5AR1 (ENSNFUG00015003845) ENSNFUG00015003843 polr2i (ENSNFUG00015003841) pglyrp5 (ENSNFUG00015003833) ENSNFUG00015019727 snrpd2 (ENSNFUG00015019674) ENSNFUG00015019640 cltcb (ENSNFUG00015019528) CCDC19 (ENSNFUG00015019498) SLC37A4A (ENSNFUG00015019494) TRAPPC4 (ENSNFUG00015019472) rps25 (ENSNFUG00015019465) sgcg (ENSNFUG00015019462) SACS (ENSNFUG00015019450) tnfrsf19 (ENSNFUG00015019365) Cyprinodontoidei ANCESTRAL SPECIES 9 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856.v ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Poeciliinae ANCESTRAL SPECIES 14 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856.v ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Poecilia ANCESTRAL SPECIES 2 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856.v ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b NAME_6 ANCESTRAL SPECIES 71 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856.v ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Amazon molly MODERN SPECIES 642 ENSPFOG00000016889 GRAMD1B (ENSPFOG00000016836) ENSPFOG00000016828 ##22 C5AR1 (ENSPFOG00000020876) polr2i (ENSPFOG00000016816) pglyrp5 (ENSPFOG00000016812) ENSPFOG00000020875 snrpd2 (ENSPFOG00000016809) ENSPFOG00000016808 cltcb (ENSPFOG00000016639) cfap45 (ENSPFOG00000016578) slc37a4a (ENSPFOG00000016553) trappc4 (ENSPFOG00000016527) rps25 (ENSPFOG00000016498) sgcg (ENSPFOG00000016458) SACS (ENSPFOG00000016423) TNFRSF19 (ENSPFOG00000016408) MIPEP (ENSPFOG00000016326) Sailfin molly MODERN SPECIES 129 BARX2 (ENSPLAG00000010512) rbm7 (ENSPLAG00000010517) ENSPLAG00000010538 ENSPLAG00000010553 ENSPLAG00000010600 ENSPLAG00000010611 ##22 C5AR1 (ENSPLAG00000010621) ENSPLAG00000010633 polr2i (ENSPLAG00000010639) pglyrp5 (ENSPLAG00000010695) ENSPLAG00000000238 snrpd2 (ENSPLAG00000010725) ENSPLAG00000010730 cltcb (ENSPLAG00000010826) cfap45 (ENSPLAG00000010876) slc37a4a (ENSPLAG00000010915) trappc4 (ENSPLAG00000010941) rps25 (ENSPLAG00000010946) sgcg (ENSPLAG00000010961) SACS (ENSPLAG00000010998) TNFRSF19 (ENSPLAG00000011007) Guppy MODERN SPECIES 443 ENSPREG00000005095 ilvbl (ENSPREG00000005075) FAM118B (ENSPREG00000005000) SRPRA (ENSPREG00000004937) TIRAP (ENSPREG00000004922) st3gal4 (ENSPREG00000004898) KCNJ5 (ENSPREG00000004879) kcnj1a.6 (ENSPREG00000004861) fli1 (ENSPREG00000004814) ets1 (ENSPREG00000004772) smtla (ENSPREG00000004744) KIRREL3 (ENSPREG00000004652) BARX2 (ENSPREG00000004613) ENSPREG00000004598 GRAMD1B (ENSPREG00000004332) ENSPREG00000004257 ##22 C5AR1 (ENSPREG00000004248) ENSPREG00000004243 polr2i (ENSPREG00000004227) pglyrp5 (ENSPREG00000004198) ENSPREG00000004185 snrpd2 (ENSPREG00000004078) ENSPREG00000004037 cltcb (ENSPREG00000003852) cfap45 (ENSPREG00000003806) trappc4 (ENSPREG00000003788) slc37a4a (ENSPREG00000003747) rps25 (ENSPREG00000003736) sgcg (ENSPREG00000003694) SACS (ENSPREG00000003645) sox5 (ENSPREG00000003554) Platyfish MODERN SPECIES 9 ilvbl (ENSXMAG00000001360) FAM118B (ENSXMAG00000001340) SRPRA (ENSXMAG00000028401) TIRAP (ENSXMAG00000030040) st3gal4 (ENSXMAG00000021951) KCNJ5 (ENSXMAG00000001290) kcnj1a.6 (ENSXMAG00000020290) fli1 (ENSXMAG00000001243) ets1 (ENSXMAG00000022043) smtla (ENSXMAG00000001203) KIRREL3 (ENSXMAG00000000958) BARX2 (ENSXMAG00000021042) rbm7 (ENSXMAG00000000970) ENSXMAG00000024431 GRAMD1B (ENSXMAG00000000977) ENSXMAG00000001008 ##22 C5AR1 (ENSXMAG00000020263) ENSXMAG00000023186 polr2i (ENSXMAG00000021278) pglyrp5 (ENSXMAG00000029057) ENSXMAG00000029697 snrpd2 (ENSXMAG00000001018) ENSXMAG00000001020 cltcb (ENSXMAG00000001032) ENSXMAG00000001086 slc37a4a (ENSXMAG00000001093) trappc4 (ENSXMAG00000001123) rps25 (ENSXMAG00000001136) sgcg (ENSXMAG00000001141) SACS (ENSXMAG00000001161) tnfrsf19 (ENSXMAG00000001169) NAME_4 ANCESTRAL SPECIES 203 ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856.v ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Sheepshead minnow MODERN SPECIES 1174 ENSCVAG00000000372 ENSCVAG00000014720 ENSCVAG00000000376 ##22 C5AR1 (ENSCVAG00000014778) polr2i (ENSCVAG00000014797) pglyrp5 (ENSCVAG00000014812) ENSCVAG00000000622 snrpd2 (ENSCVAG00000014834) Mummichog MODERN SPECIES 382 ENSFHEG00000015740 ENSFHEG00000015728 ENSFHEG00000015685 ##22 ENSFHEG00000015681 ENSFHEG00000015677 polr2i (ENSFHEG00000015659) pglyrp5 (ENSFHEG00000015614) ENSFHEG00000015603 snrpd2 (ENSFHEG00000015591) ENSFHEG00000015584 cltcb (ENSFHEG00000015578) cfap45 (ENSFHEG00000015457) slc37a4a (ENSFHEG00000015449) trappc4 (ENSFHEG00000015416) rps25 (ENSFHEG00000015395) sgcg (ENSFHEG00000015375) SACS (ENSFHEG00000015368) TNFRSF19 (ENSFHEG00000015343) Oryzias ANCESTRAL SPECIES 8 ENSGT00940000158893.o.a ENSGT00940000158893.o.b.a ENSGT00940000158893.o.b.b ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00940000180218 ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Oryzias_b ANCESTRAL SPECIES 38 ENSGT00940000158893.p ENSGT00940000158893.o.a.a ENSGT00940000158893.o.b.a ENSGT00940000158893.o.b.b ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00940000180218 ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Indian medaka MODERN SPECIES 607 GRAMD1B (ENSOMEG00000012433) ENSOMEG00000012524 ##22 C5AR1 (ENSOMEG00000012538) ENSOMEG00000012550 polr2i (ENSOMEG00000012586) pglyrp5 (ENSOMEG00000012625) ENSOMEG00000012642 snrpd2 (ENSOMEG00000012661) Javanese ricefish MODERN SPECIES 4 ENSOJAG00000014199 st3gal4 (ENSOJAG00000014184) st3gal4 (ENSOJAG00000014095) st3gal4 (ENSOJAG00000013984) KCNJ5 (ENSOJAG00000013969) kcnj1a.6 (ENSOJAG00000013962) fli1 (ENSOJAG00000013919) ets1 (ENSOJAG00000013873) smtla (ENSOJAG00000013780) KIRREL3 (ENSOJAG00000012633) BARX2 (ENSOJAG00000012539) rbm7 (ENSOJAG00000012529) ENSOJAG00000012522 GRAMD1B (ENSOJAG00000010761) ENSOJAG00000010483 ENSOJAG00000010476 ##22 C5AR1 (ENSOJAG00000010470) ENSOJAG00000010454 polr2i (ENSOJAG00000010422) pglyrp5 (ENSOJAG00000010415) ENSOJAG00000010411 snrpd2 (ENSOJAG00000010389) ENSOJAG00000010359 ENSOJAG00000009926 slc37a4a (ENSOJAG00000009807) trappc4 (ENSOJAG00000009698) rps25 (ENSOJAG00000009673) sgcg (ENSOJAG00000009619) SACS (ENSOJAG00000009552) tnfrsf19 (ENSOJAG00000009533) MIPEP (ENSOJAG00000008477) Oryzias_a ANCESTRAL SPECIES 8 ENSGT00940000158893.o.a ENSGT00940000158893.o.b.a ENSGT00940000158893.o.b.b ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B Japanese Medaka HdrR MODERN SPECIES 4 st3gal4 (ENSORLG00000026397) KCNJ5 (ENSORLG00000027135) kcnj1a.6 (ENSORLG00000013560) fli1 (ENSORLG00000013548) ets1 (ENSORLG00000013508) ENSORLG00000023734 ENSORLG00000027568 smtla (ENSORLG00000013460) KIRREL3 (ENSORLG00000027086) BARX2 (ENSORLG00000013417) rbm7 (ENSORLG00000028880) ENSORLG00000013393 ENSORLG00000028698 ENSORLG00000013377 ENSORLG00000013340 ENSORLG00000030101 ##22 ENSORLG00000024020 polr2i (ENSORLG00000013308) pglyrp5 (ENSORLG00000013289) foxg1c (ENSORLG00000023339) snrpd2 (ENSORLG00000026725) ENSORLG00000013271 cltcb (ENSORLG00000013227) cfap45 (ENSORLG00000013148) slc37a4a (ENSORLG00000013125) trappc4 (ENSORLG00000013098) rps25 (ENSORLG00000013087) sgcg (ENSORLG00000013077) SACS (ENSORLG00000013037) tnfrsf19 (ENSORLG00000013020) MIPEP (ENSORLG00000012997) Chinese medaka MODERN SPECIES 312 ENSOSIG00000006790 ENSOSIG00000006624 ENSOSIG00000006596 ##22 ENSOSIG00000006595 ENSOSIG00000006594 polr2i (ENSOSIG00000006592) pglyrp5 (ENSOSIG00000006591) ENSOSIG00000006589 VASP (ENSOSIG00000006584) ENSOSIG00000006580 sgcg (ENSOSIG00000006508) SACS (ENSOSIG00000006494) tnfrsf19 (ENSOSIG00000006469) MIPEP (ENSOSIG00000006303) BRWD1 (ENSOSIG00000005984) DSCAM (ENSOSIG00000005313) ENSOSIG00000005303 Ovalentaria_B ANCESTRAL SPECIES 11 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Cichlidae ANCESTRAL SPECIES 25 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174.e ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Pseudocrenilabrinae ANCESTRAL SPECIES 22 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a.l.b.a ENSGT01100000263564.a.k ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174.e ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 Pseudocrenilabrinae_A ANCESTRAL SPECIES 25 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a.l.b.a ENSGT01100000263564.a.l.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174.e ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 Haplochromini ANCESTRAL SPECIES 33 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a.l.b.a ENSGT01100000263564.a.l.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174.e ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 Burton s mouthbrooder MODERN SPECIES 355 FAM118B (ENSHBUG00000004782) SRPRA (ENSHBUG00000000119) TIRAP (ENSHBUG00000004726) st3gal4 (ENSHBUG00000004712) KCNJ5 (ENSHBUG00000004689) kcnj1a.6 (ENSHBUG00000004670) fli1 (ENSHBUG00000004654) ets1 (ENSHBUG00000004595) smtla (ENSHBUG00000004509) KIRREL3 (ENSHBUG00000004480) BARX2 (ENSHBUG00000004338) rbm7 (ENSHBUG00000004319) ENSHBUG00000004307 ENSHBUG00000004299 ENSHBUG00000000107 ENSHBUG00000004182 ##22 ENSHBUG00000004170 ENSHBUG00000004164 ENSHBUG00000004156 polr2i (ENSHBUG00000004140) pglyrp5 (ENSHBUG00000004120) ENSHBUG00000004079 snrpd2 (ENSHBUG00000004073) ENSHBUG00000004063 cltcb (ENSHBUG00000004050) cfap45 (ENSHBUG00000003980) slc37a4a (ENSHBUG00000003894) trappc4 (ENSHBUG00000000092) rps25 (ENSHBUG00000003855) sgcg (ENSHBUG00000003840) SACS (ENSHBUG00000003826) Haplochromini_A ANCESTRAL SPECIES 20 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a.l.b.a ENSGT01100000263564.a.l.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174.e ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 Haplochromini_B ANCESTRAL SPECIES 9 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a.l.b.a ENSGT01100000263564.a.l.a.b ENSGT01100000263564.a.l.a.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174.e ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 Zebra mbuna MODERN SPECIES 1096 FAM118B (ENSMZEG00005013437) SRPRA (ENSMZEG00005013432) TIRAP (ENSMZEG00005013425) st3gal4 (ENSMZEG00005013417) KCNJ5 (ENSMZEG00005013410) kcnj1a.6 (ENSMZEG00005013406) fli1 (ENSMZEG00005013396) ets1 (ENSMZEG00005013374) smtla (ENSMZEG00005013358) KIRREL3 (ENSMZEG00005013318) BARX2 (ENSMZEG00005013297) rbm7 (ENSMZEG00005013295) ENSMZEG00005013285 ENSMZEG00005013276 ENSMZEG00005013163 ENSMZEG00005013128 ##22 ENSMZEG00005013120 ENSMZEG00005013112 ENSMZEG00005013103 ENSMZEG00005013092 polr2i (ENSMZEG00005013082) pglyrp5 (ENSMZEG00005013071) ENSMZEG00005013061 snrpd2 (ENSMZEG00005013054) ENSMZEG00005013046 ENSMZEG00005013032 cltcb (ENSMZEG00005012942) cfap45 (ENSMZEG00005012892) slc37a4a (ENSMZEG00005012872) trappc4 (ENSMZEG00005012853) rps25 (ENSMZEG00005012840) Eastern happy MODERN SPECIES 5 TIRAP (ENSACLG00000000549) st3gal4 (ENSACLG00000000702) KCNJ5 (ENSACLG00000000748) kcnj1a.6 (ENSACLG00000000763) fli1 (ENSACLG00000000771) ets1 (ENSACLG00000000845) smtla (ENSACLG00000000919) ENSACLG00000001010 KIRREL3 (ENSACLG00000001052) BARX2 (ENSACLG00000001173) rbm7 (ENSACLG00000001203) ENSACLG00000001268 ENSACLG00000001307 ENSACLG00000001326 ENSACLG00000001514 ENSACLG00000001517 ##22 ENSACLG00000001521 ENSACLG00000001528 ENSACLG00000001543 ENSACLG00000001647 polr2i (ENSACLG00000001663) pglyrp5 (ENSACLG00000001693) ENSACLG00000001738 snrpd2 (ENSACLG00000001746) VASP (ENSACLG00000001772) ENSACLG00000001786 cltcb (ENSACLG00000001802) cfap45 (ENSACLG00000001879) slc37a4a (ENSACLG00000001899) trappc4 (ENSACLG00000001923) rps25 (ENSACLG00000001937) P. nyererei MODERN SPECIES 298 FAM118B (ENSPNYG00000012417) SRPRA (ENSPNYG00000012371) TIRAP (ENSPNYG00000012352) st3gal4 (ENSPNYG00000012332) KCNJ5 (ENSPNYG00000012314) kcnj1a.6 (ENSPNYG00000012292) fli1 (ENSPNYG00000012255) ets1 (ENSPNYG00000012200) ENSPNYG00000012158 KIRREL3 (ENSPNYG00000012121) BARX2 (ENSPNYG00000012093) rbm7 (ENSPNYG00000012084) ENSPNYG00000012058 ENSPNYG00000012046 ENSPNYG00000011995 ENSPNYG00000011963 ##22 ENSPNYG00000011958 ENSPNYG00000011936 ENSPNYG00000011918 polr2i (ENSPNYG00000011908) pglyrp5 (ENSPNYG00000011859) ENSPNYG00000011839 snrpd2 (ENSPNYG00000011826) ENSPNYG00000011815 ENSPNYG00000011797 cltcb (ENSPNYG00000011737) cfap45 (ENSPNYG00000011669) slc37a4a (ENSPNYG00000011642) trappc4 (ENSPNYG00000011626) rps25 (ENSPNYG00000011614) sgcg (ENSPNYG00000011599) Lyretail cichlid MODERN SPECIES 418 FAM118B (ENSNBRG00000017350) SRPRA (ENSNBRG00000017311) TIRAP (ENSNBRG00000017287) st3gal4 (ENSNBRG00000017276) KCNJ5 (ENSNBRG00000017258) kcnj1a.6 (ENSNBRG00000017238) fli1 (ENSNBRG00000017217) ets1 (ENSNBRG00000017178) smtla (ENSNBRG00000017159) KIRREL3 (ENSNBRG00000017122) BARX2 (ENSNBRG00000017111) rbm7 (ENSNBRG00000017104) ENSNBRG00000017080 ENSNBRG00000017059 ENSNBRG00000017014 ENSNBRG00000016985 ##22 ENSNBRG00000016968 ENSNBRG00000016960 Nile tilapia MODERN SPECIES 5 ilvbl (ENSONIG00000005317) fam118b (ENSONIG00000041931) SRPRA (ENSONIG00000005324) TIRAP (ENSONIG00000005330) st3gal4 (ENSONIG00000039068) KCNJ5 (ENSONIG00000005332) kcnj1a.6 (ENSONIG00000021375) ENSONIG00000033432 fli1 (ENSONIG00000005335) ets1 (ENSONIG00000005344) smtla (ENSONIG00000005357) KIRREL3 (ENSONIG00000005361) BARX2 (ENSONIG00000005367) ENSONIG00000005370 GRAMD1B (ENSONIG00000005377) ENSONIG00000031555 ##22 ENSONIG00000027383 ENSONIG00000030237 ENSONIG00000035453 ENSONIG00000028179 ENSONIG00000041079 polr2i (ENSONIG00000005397) pglyrp5 (ENSONIG00000028864) ENSONIG00000005405 snrpd2 (ENSONIG00000042301) VASP (ENSONIG00000005407) cltcb (ENSONIG00000005419) cfap45 (ENSONIG00000005430) slc37a4a (ENSONIG00000005432) trappc4 (ENSONIG00000005436) rps25 (ENSONIG00000005440) Midas cichlid MODERN SPECIES 462 ENSACIG00000001819 ENSACIG00000001781 ENSACIG00000001770 ##22 ENSACIG00000001761 ENSACIG00000001746 Pomacentridae ANCESTRAL SPECIES 5 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000160678.a ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Pomacentridae_A ANCESTRAL SPECIES 4 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000160678.a ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Amphiprion ANCESTRAL SPECIES 6 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000160678.a ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Clown anemonefish MODERN SPECIES 12 ENSAOCG00000024365 ENSAOCG00000024369 ##22 ENSAOCG00000024373 polr2i (ENSAOCG00000024378) pglyrp5 (ENSAOCG00000024402) ENSAOCG00000024408 snrpd2 (ENSAOCG00000024413) ENSAOCG00000024423 cfap45 (ENSAOCG00000024441) cltcb (ENSAOCG00000024478) Orange clownfish MODERN SPECIES 23 ilvbl (ENSAPEG00000022326) FAM118B (ENSAPEG00000022311) SRPRA (ENSAPEG00000022286) TIRAP (ENSAPEG00000022270) st3gal4 (ENSAPEG00000022247) KCNJ5 (ENSAPEG00000022225) fli1 (ENSAPEG00000022197) ets1 (ENSAPEG00000022158) smtla (ENSAPEG00000022130) KIRREL3 (ENSAPEG00000022055) BARX2 (ENSAPEG00000021993) rbm7 (ENSAPEG00000021981) ENSAPEG00000021940 ENSAPEG00000021933 ENSAPEG00000021828 ENSAPEG00000021803 ##22 ENSAPEG00000021791 ENSAPEG00000021772 polr2i (ENSAPEG00000021748) pglyrp5 (ENSAPEG00000021734) ENSAPEG00000021721 snrpd2 (ENSAPEG00000021711) ENSAPEG00000021676 cltcb (ENSAPEG00000021354) cfap45 (ENSAPEG00000021279) slc37a4a (ENSAPEG00000021249) trappc4 (ENSAPEG00000021231) rps25 (ENSAPEG00000021211) sgcg (ENSAPEG00000021190) SACS (ENSAPEG00000021169) tnfrsf19 (ENSAPEG00000021145) Spiny chromis MODERN SPECIES 83 smtla (ENSAPOG00000001096) KIRREL3 (ENSAPOG00000012911) BARX2 (ENSAPOG00000012792) rbm7 (ENSAPOG00000012768) ENSAPOG00000012756 ENSAPOG00000012744 GRAMD1B (ENSAPOG00000012681) ENSAPOG00000012466 ##22 C5AR1 (ENSAPOG00000012451) ENSAPOG00000012441 polr2i (ENSAPOG00000012409) pglyrp5 (ENSAPOG00000012372) ENSAPOG00000012318 snrpd2 (ENSAPOG00000012310) ENSAPOG00000012297 cltcb (ENSAPOG00000012268) cfap45 (ENSAPOG00000012056) slc37a4a (ENSAPOG00000012035) trappc4 (ENSAPOG00000011997) rps25 (ENSAPOG00000011961) Bicolor damselfish MODERN SPECIES 298 ENSSPAG00000015685 ENSSPAG00000015707 ##22 C5AR1 (ENSSPAG00000015715) ENSSPAG00000015721 polr2i (ENSSPAG00000015734) pglyrp5 (ENSSPAG00000015743) ENSSPAG00000015757 snrpd2 (ENSSPAG00000015767) VASP (ENSSPAG00000015781) cltcb (ENSSPAG00000015858) cfap45 (ENSSPAG00000016083) slc37a4a (ENSSPAG00000016165) trappc4 (ENSSPAG00000016181) rps25 (ENSSPAG00000016203) sgcg (ENSSPAG00000016214) SACS (ENSSPAG00000016240) tnfrsf19 (ENSSPAG00000016259) Percomorphaceae_C ANCESTRAL SPECIES 9 ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00940000180218 ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00940000181074 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000177608 ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 Eupercaria ANCESTRAL SPECIES 7 ENSGT00940000158035 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00940000181074 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 Eupecaria_A ANCESTRAL SPECIES 9 ENSGT00940000158035 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00940000181074 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 Ballan wrasse MODERN SPECIES 651 ENSLBEG00000001120 ENSLBEG00000001174 ##22 C5AR1 (ENSLBEG00000001190) ENSLBEG00000001207 polr2i (ENSLBEG00000001220) pglyrp5 (ENSLBEG00000001234) ENSLBEG00000001247 ENSLBEG00000001261 Eupecaria_B ANCESTRAL SPECIES 9 ENSGT00940000158035 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00940000181074 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 Perciformes ANCESTRAL SPECIES 10 ENSGT00940000158035 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00940000181074 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 Perciformes_a ANCESTRAL SPECIES 9 ENSGT00940000158035 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00940000181074 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 Channel bull blenny MODERN SPECIES 4 ilvbl (ENSCGOG00000016745) FAM118B (ENSCGOG00000016715) SRPRA (ENSCGOG00000016551) TIRAP (ENSCGOG00000016548) st3gal4 (ENSCGOG00000016547) KCNJ5 (ENSCGOG00000016546) kcnj1a.6 (ENSCGOG00000016538) fli1 (ENSCGOG00000016535) ets1 (ENSCGOG00000016425) smtla (ENSCGOG00000016395) KIRREL3 (ENSCGOG00000015960) BARX2 (ENSCGOG00000015953) rbm7 (ENSCGOG00000015949) ENSCGOG00000015947 GRAMD1B (ENSCGOG00000015794) ENSCGOG00000015781 ##22 C5AR1 (ENSCGOG00000015779) ENSCGOG00000015774 ENSCGOG00000015772 polr2i (ENSCGOG00000015751) pglyrp5 (ENSCGOG00000015771) ENSCGOG00000015749 snrpd2 (ENSCGOG00000015737) ENSCGOG00000015730 cltcb (ENSCGOG00000013796) cfap45 (ENSCGOG00000013714) slc37a4a (ENSCGOG00000013554) trappc4 (ENSCGOG00000013493) rps25 (ENSCGOG00000013486) sgcg (ENSCGOG00000013466) ENSCGOG00000013463 Pike perch MODERN SPECIES 86 ilvbl (ENSSLUG00000012512) FAM118B (ENSSLUG00000012960) SRPRA (ENSSLUG00000012979) TIRAP (ENSSLUG00000013001) st3gal4 (ENSSLUG00000013004) KCNJ5 (ENSSLUG00000013006) kcnj1a.6 (ENSSLUG00000013009) fli1 (ENSSLUG00000013014) ets1 (ENSSLUG00000013039) smtla (ENSSLUG00000013091) KIRREL3 (ENSSLUG00000013160) BARX2 (ENSSLUG00000013180) rbm7 (ENSSLUG00000013183) ENSSLUG00000013184 GRAMD1B (ENSSLUG00000013204) ENSSLUG00000013257 ##22 C5AR1 (ENSSLUG00000013260) ENSSLUG00000013263 polr2i (ENSSLUG00000013267) pglyrp5 (ENSSLUG00000013271) ENSSLUG00000013276 snrpd2 (ENSSLUG00000013281) ENSSLUG00000013299 cltcb (ENSSLUG00000013439) cfap45 (ENSSLUG00000015289) slc37a4a (ENSSLUG00000015303) trappc4 (ENSSLUG00000015317) rps25 (ENSSLUG00000015373) sgcg (ENSSLUG00000015383) ENSSLUG00000015394 tnfrsf19 (ENSSLUG00000015420) Cottioidei ANCESTRAL SPECIES 4 ENSGT00940000158035 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000160678.a ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Lumpfish MODERN SPECIES 4 ilvbl (ENSCLMG00005013299) FAM118B (ENSCLMG00005013298) SRPRA (ENSCLMG00005013262) TIRAP (ENSCLMG00005013261) st3gal4 (ENSCLMG00005013260) KCNJ5 (ENSCLMG00005013259) kcnj1a.6 (ENSCLMG00005013258) fli1 (ENSCLMG00005013257) ets1 (ENSCLMG00005013248) smtla (ENSCLMG00005013242) KIRREL3 (ENSCLMG00005013232) BARX2 (ENSCLMG00005013228) rbm7 (ENSCLMG00005013226) ENSCLMG00005013202 GRAMD1B (ENSCLMG00005012676) ENSCLMG00005012669 ##22 C5AR1 (ENSCLMG00005012667) ENSCLMG00005012666 polr2i (ENSCLMG00005012665) pglyrp5 (ENSCLMG00005012664) ENSCLMG00005012662 snrpd2 (ENSCLMG00005012655) VASP (ENSCLMG00005012654) cltcb (ENSCLMG00005009669) cfap45 (ENSCLMG00005009643) slc37a4a (ENSCLMG00005009642) trappc4 (ENSCLMG00005009638) rps25 (ENSCLMG00005009636) sgcg (ENSCLMG00005009633) ENSCLMG00005009632 tnfrsf19 (ENSCLMG00005009631) Eupecaria_C ANCESTRAL SPECIES 7 ENSGT00940000158035 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 5 ENSGT00940000158035 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Large yellow croaker MODERN SPECIES 479 ilvbl (ENSLCRG00005011098) FAM118B (ENSLCRG00005011091) SRPRA (ENSLCRG00005011089) TIRAP (ENSLCRG00005011084) st3gal4 (ENSLCRG00005011083) KCNJ5 (ENSLCRG00005011081) kcnj1a.6 (ENSLCRG00005011080) fli1 (ENSLCRG00005011078) ets1 (ENSLCRG00005011059) smtla (ENSLCRG00005011023) KIRREL3 (ENSLCRG00005010019) BARX2 (ENSLCRG00005010006) rbm7 (ENSLCRG00005010003) ENSLCRG00005010001 GRAMD1B (ENSLCRG00005009930) ENSLCRG00005009921 ##22 C5AR1 (ENSLCRG00005009920) ENSLCRG00005009919 polr2i (ENSLCRG00005009916) pglyrp5 (ENSLCRG00005009913) ENSLCRG00005009911 snrpd2 (ENSLCRG00005009896) ENSLCRG00005009895 ENSLCRG00005009893 cltcb (ENSLCRG00005009451) cfap45 (ENSLCRG00005009427) slc37a4a (ENSLCRG00005009425) trappc4 (ENSLCRG00005009421) rps25 (ENSLCRG00005009418) sgcg (ENSLCRG00005009415) SACS (ENSLCRG00005009399) European seabass MODERN SPECIES 3 ENSDLAG00005008998 ilvbl (ENSDLAG00005009269) FAM118B (ENSDLAG00005009479) ENSDLAG00005031448 TIRAP (ENSDLAG00005033575) st3gal4 (ENSDLAG00005009533) KCNJ5 (ENSDLAG00005009541) kcnj1a.6 (ENSDLAG00005035079) fli1 (ENSDLAG00005031157) ets1 (ENSDLAG00005009638) smtla (ENSDLAG00005009806) KIRREL3 (ENSDLAG00005009880) ENSDLAG00005010655 ENSDLAG00005010674 ENSDLAG00005010702 ENSDLAG00005011252 ##22 ENSDLAG00005011258 ENSDLAG00005011268 ENSDLAG00005026611 ENSDLAG00005011366 ENSDLAG00005011371 ENSDLAG00005011388 ENSDLAG00005012049 slc37a4a (ENSDLAG00005026556) trappc4 (ENSDLAG00005034726) RPS25 (ENSDLAG00005012136) sgcg (ENSDLAG00005012152) SACS (ENSDLAG00005012160) TNFRSF19 (ENSDLAG00005012166) MIPEP (ENSDLAG00005012227) BRWD1 (ENSDLAG00005014292) Gilthead seabream MODERN SPECIES 11 SRPRA (ENSSAUG00010009909) TIRAP (ENSSAUG00010009902) st3gal4 (ENSSAUG00010009897) KCNJ5 (ENSSAUG00010009895) kcnj1a.6 (ENSSAUG00010009894) fli1 (ENSSAUG00010009892) ets1 (ENSSAUG00010009867) smtla (ENSSAUG00010009844) ENSSAUG00010009841 KIRREL3 (ENSSAUG00010009134) BARX2 (ENSSAUG00010009111) rbm7 (ENSSAUG00010009108) ENSSAUG00010009101 ENSSAUG00010009095 GRAMD1B (ENSSAUG00010009058) ENSSAUG00010009046 ##22 ENSSAUG00010009043 polr2i (ENSSAUG00010009039) pglyrp5 (ENSSAUG00010009038) ENSSAUG00010009036 snrpd2 (ENSSAUG00010009035) ENSSAUG00010009034 cltcb (ENSSAUG00010009002) cfap45 (ENSSAUG00010008997) slc37a4a (ENSSAUG00010008995) trappc4 (ENSSAUG00010008988) rps25 (ENSSAUG00010008984) sgcg (ENSSAUG00010008983) ENSSAUG00010008982 ENSSAUG00010008981 ENSSAUG00010008979 Tetraodontidae ANCESTRAL SPECIES 42 ENSGT00940000158035 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Fugu MODERN SPECIES 2 FAM118B (ENSTRUG00000006706) SRPRA (ENSTRUG00000006856) tirap (ENSTRUG00000007154) st3gal4 (ENSTRUG00000007186) KCNJ5 (ENSTRUG00000007361) kcnj1a.6 (ENSTRUG00000007643) fli1 (ENSTRUG00000007690) ets1 (ENSTRUG00000023588) smtla (ENSTRUG00000008210) KIRREL3 (ENSTRUG00000008342) BARX2 (ENSTRUG00000008590) rbm7 (ENSTRUG00000020355) ENSTRUG00000033025 ENSTRUG00000000185 GRAMD1B (ENSTRUG00000000208) ENSTRUG00000023751 ##22 ENSTRUG00000000252 ENSTRUG00000020999 polr2i (ENSTRUG00000022235) pglyrp5 (ENSTRUG00000021181) ENSTRUG00000023123 snrpd2 (ENSTRUG00000023014) ENSTRUG00000000275 cltcb (ENSTRUG00000000313) cfap45 (ENSTRUG00000000400) slc37a4a (ENSTRUG00000022477) trappc4 (ENSTRUG00000000505) rps25 (ENSTRUG00000000547) sgcg (ENSTRUG00000000565) SACS (ENSTRUG00000000662) tnfrsf19 (ENSTRUG00000000696) Percomorphaceae_D ANCESTRAL SPECIES 9 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00940000180218 ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000177608 ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 Carangaria ANCESTRAL SPECIES 8 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00940000180218 ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000177608 ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 Pleuronectoidei ANCESTRAL SPECIES 13 ENSGT00940000158035 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b Tongue sole MODERN SPECIES 14 PCP4 (ENSCSEG00000002068) ENSCSEG00000002075 get1 (ENSCSEG00000002084) ENSCSEG00000002092 ENSCSEG00000002102 MIPEP (ENSCSEG00000002112) tnfrsf19 (ENSCSEG00000002123) ENSCSEG00000002124 smtla (ENSCSEG00000002132) KIRREL3 (ENSCSEG00000002142) BARX2 (ENSCSEG00000002154) rbm7 (ENSCSEG00000002160) ENSCSEG00000002168 ENSCSEG00000002179 GRAMD1B (ENSCSEG00000002184) ENSCSEG00000002202 ##22 C5AR1 (ENSCSEG00000002207) polr2i (ENSCSEG00000002213) ENSCSEG00000002221 pglyrp5 (ENSCSEG00000002225) ENSCSEG00000002227 snrpd2 (ENSCSEG00000002230) ENSCSEG00000002235 cltcb (ENSCSEG00000002250) cfap45 (ENSCSEG00000002304) slc37a4a (ENSCSEG00000002309) trappc4 (ENSCSEG00000002316) rps25 (ENSCSEG00000002321) sgcg (ENSCSEG00000002326) ENSCSEG00000002337 SACS (ENSCSEG00000002339) Carangaria_A ANCESTRAL SPECIES 52 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00940000180218 ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000177608 ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856.t ENSGT00940000159187 ENSGT00390000016695 Seriola ANCESTRAL SPECIES 128 ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00940000180218 ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00940000177608 ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856.t ENSGT00940000159187 ENSGT00390000016695 Yellowtail amberjack MODERN SPECIES 2402 ENSSLDG00000009146 GRAMD1B (ENSSLDG00000009221) ENSSLDG00000009287 ##22 C5AR1 (ENSSLDG00000009304) ENSSLDG00000009321 polr2i (ENSSLDG00000009341) pglyrp5 (ENSSLDG00000009360) ENSSLDG00000009386 snrpd2 (ENSSLDG00000009397) ENSSLDG00000009415 cltcb (ENSSLDG00000009484) cfap45 (ENSSLDG00000009743) slc37a4a (ENSSLDG00000009766) trappc4 (ENSSLDG00000009799) rps25 (ENSSLDG00000009826) sgcg (ENSSLDG00000009843) SACS (ENSSLDG00000009869) Greater amberjack MODERN SPECIES 43 kcnj1a.6 (ENSSDUG00000005157) fli1 (ENSSDUG00000005196) ets1 (ENSSDUG00000005246) smtla (ENSSDUG00000005262) KIRREL3 (ENSSDUG00000005282) BARX2 (ENSSDUG00000005347) rbm7 (ENSSDUG00000005361) ENSSDUG00000005377 ENSSDUG00000005399 GRAMD1B (ENSSDUG00000005416) ENSSDUG00000005452 ENSSDUG00000005460 ##22 C5AR1 (ENSSDUG00000005466) ENSSDUG00000005471 polr2i (ENSSDUG00000005483) pglyrp5 (ENSSDUG00000005491) ENSSDUG00000005509 snrpd2 (ENSSDUG00000005519) VASP (ENSSDUG00000005533) cltcb (ENSSDUG00000005578) ENSSDUG00000005653 cfap45 (ENSSDUG00000005663) slc37a4a (ENSSDUG00000005710) trappc4 (ENSSDUG00000005725) rps25 (ENSSDUG00000005736) sgcg (ENSSDUG00000005741) SACS (ENSSDUG00000005760) Barramundi perch MODERN SPECIES 458 ENSLCAG00010026614 ENSLCAG00010026609 ENSLCAG00010026605 ##22 ENSLCAG00010026602 ENSLCAG00010026601 polr2i (ENSLCAG00010026597) pglyrp5 (ENSLCAG00010026594) ENSLCAG00010026593 snrpd2 (ENSLCAG00010026589) VASP (ENSLCAG00010026587) cltcb (ENSLCAG00010026385) cfap45 (ENSLCAG00010026248) slc37a4a (ENSLCAG00010026246) trappc4 (ENSLCAG00010026245) rps25 (ENSLCAG00010026239) sgcg (ENSLCAG00010026235) SACS (ENSLCAG00010026232) tnfrsf19 (ENSLCAG00010026226) Anabantaria ANCESTRAL SPECIES 9 ENSGT00940000158035 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00980000203400 ENSGT00940000153259.a.a.b Zig-zag eel MODERN SPECIES 4 ENSMAMG00000000473 TIRAP (ENSMAMG00000000461) st3gal4 (ENSMAMG00000000419) KCNJ5 (ENSMAMG00000000371) KCNJ1 (ENSMAMG00000000349) KCNJ1 (ENSMAMG00000000342) fli1 (ENSMAMG00000000324) ets1 (ENSMAMG00000000298) smtla (ENSMAMG00000000292) ENSMAMG00000027870 KIRREL3 (ENSMAMG00000014169) ENSMAMG00000014153 rbm7 (ENSMAMG00000014145) ENSMAMG00000026054 ENSMAMG00000014028 ENSMAMG00000014011 ##22 ENSMAMG00000014003 ENSMAMG00000013992 polr2i (ENSMAMG00000013970) pglyrp5 (ENSMAMG00000013962) ENSMAMG00000013946 snrpd2 (ENSMAMG00000026288) ENSMAMG00000013883 ENSMAMG00000013799 ENSMAMG00000013725 slc37a4a (ENSMAMG00000013683) trappc4 (ENSMAMG00000013672) RPS25 (ENSMAMG00000013655) sgcg (ENSMAMG00000013624) SACS (ENSMAMG00000013583) ENSMAMG00000027045 Anabantoidei ANCESTRAL SPECIES 14 ENSGT00940000158035 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00940000175519 ENSGT00550000075063 ENSGT00940000161006 ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00390000004856 ENSGT00940000159187 ENSGT00390000016695 ENSGT00940000153259.a.a.b ENSGT00950000183171.B Siamese fighting fish MODERN SPECIES 4 ENSBSLG00000007649 ilvbl (ENSBSLG00000007215) FAM118B (ENSBSLG00000007187) SRPRA (ENSBSLG00000007149) TIRAP (ENSBSLG00000007144) st3gal4 (ENSBSLG00000007127) KCNJ5 (ENSBSLG00000007115) fli1 (ENSBSLG00000007052) ets1 (ENSBSLG00000006961) ENSBSLG00000006440 KIRREL3 (ENSBSLG00000005186) BARX2 (ENSBSLG00000004793) rbm7 (ENSBSLG00000004774) ENSBSLG00000004738 GRAMD1B (ENSBSLG00000004101) ENSBSLG00000003832 ##22 ENSBSLG00000003825 ENSBSLG00000003819 polr2i (ENSBSLG00000003807) pglyrp5 (ENSBSLG00000003754) ENSBSLG00000003656 snrpd2 (ENSBSLG00000003632) ENSBSLG00000003018 cltcb (ENSBSLG00000002679) slc37a4a (ENSBSLG00000002519) trappc4 (ENSBSLG00000002446) rps25 (ENSBSLG00000002417) sgcg (ENSBSLG00000002399) SACS (ENSBSLG00000002286) tnfrsf19 (ENSBSLG00000002236) MIPEP (ENSBSLG00000025221) Climbing perch MODERN SPECIES 4 ilvbl (ENSATEG00000023567) FAM118B (ENSATEG00000023573) ENSATEG00000023578 TIRAP (ENSATEG00000028115) st3gal4 (ENSATEG00000023590) KCNJ5 (ENSATEG00000023593) kcnj1a.6 (ENSATEG00000023597) fli1 (ENSATEG00000026806) ets1 (ENSATEG00000000015) smtla (ENSATEG00000000111) KIRREL3 (ENSATEG00000000506) ENSATEG00000026904 rbm7 (ENSATEG00000029066) ENSATEG00000000612 ENSATEG00000000662 ENSATEG00000027658 ##22 ENSATEG00000028536 ENSATEG00000000708 polr2i (ENSATEG00000000758) pglyrp5 (ENSATEG00000000796) ENSATEG00000000862 snrpd2 (ENSATEG00000000868) ENSATEG00000027800 ENSATEG00000001007 ENSATEG00000001151 slc37a4a (ENSATEG00000001221) trappc4 (ENSATEG00000001260) RPS25 (ENSATEG00000001289) sgcg (ENSATEG00000001297) SACS (ENSATEG00000001324) TNFRSF19 (ENSATEG00000001369) Pinecone sodierfish MODERN SPECIES 4 FAM118B (ENSMMDG00005006318) SRPRA (ENSMMDG00005006325) TIRAP (ENSMMDG00005006339) st3gal4 (ENSMMDG00005006340) KCNJ5 (ENSMMDG00005006343) kcnj1a.6 (ENSMMDG00005006345) fli1 (ENSMMDG00005006346) ets1 (ENSMMDG00005006350) smtla (ENSMMDG00005006365) ENSMMDG00005006527 KIRREL3 (ENSMMDG00005006538) BARX2 (ENSMMDG00005006638) rbm7 (ENSMMDG00005006640) ENSMMDG00005006644 GRAMD1B (ENSMMDG00005006665) ENSMMDG00005006674 ##22 C5AR1 (ENSMMDG00005006676) ENSMMDG00005006677 ENSMMDG00005006678 polr2i (ENSMMDG00005006681) pglyrp5 (ENSMMDG00005006682) ENSMMDG00005006684 snrpd2 (ENSMMDG00005006685) VASP (ENSMMDG00005006688) cltcb (ENSMMDG00005006704) cfap45 (ENSMMDG00005008215) slc37a4a (ENSMMDG00005008222) trappc4 (ENSMMDG00005008227) rps25 (ENSMMDG00005008239) sgcg (ENSMMDG00005008249) SACS (ENSMMDG00005008283) Cod MODERN SPECIES 7 ilvbl (ENSGMOG00000013220) ENSGMOG00000013237 ENSGMOG00000013244 ENSGMOG00000013263 st3gal4 (ENSGMOG00000013270) KCNJ5 (ENSGMOG00000013278) kcnj1a.6 (ENSGMOG00000020485) fli1 (ENSGMOG00000013284) ets1 (ENSGMOG00000013298) smtla (ENSGMOG00000013307) KIRREL3 (ENSGMOG00000013317) ENSGMOG00000029215 rbm7 (ENSGMOG00000022905) ENSGMOG00000013369 ENSGMOG00000013382 ENSGMOG00000035591 ##22 ENSGMOG00000013429 ENSGMOG00000009360 ENSGMOG00000034998 ENSGMOG00000031464 ENSGMOG00000027897 ENSGMOG00000032895 ENSGMOG00000031893 ENSGMOG00000010982 ENSGMOG00000010909 ENSGMOG00000010902 relt (ENSGMOG00000032024) ENSGMOG00000010857 ENSGMOG00000031389 P2RY6 (ENSGMOG00000010851) ENSGMOG00000010837 Protacanthopterygii ANCESTRAL SPECIES 15 ENSGT00940000158035 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b.c ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00990000204162 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.k.a ENSGT00390000017608.k.b ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a ENSGT00730000111174 ENSGT00730000111086 ENSGT00940000153761.B ENSGT00950000185233 ENSGT00390000004856 ENSGT00940000159187.k Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 453 ENSGT00940000158261.m.b ENSGT00940000159519.g.b ENSGT00950000182818.C.a ENSGT00940000157126.e.f ENSGT00940000159663.e ENSGT00870000136493.d.d ENSGT00940000164937.a.a.b ENSGT00940000156649.c.a.h ENSGT00950000183181.B.b.l.b.a ##22 ENSGT01100000263564.a.m ENSGT00990000204162.c ENSGT00550000075063.v ENSGT00940000161006.m ENSGT00390000017608.k.b ENSGT00940000156765.a.a ENSGT00950000183166.a.a.a.b.e.a.d.b ENSGT00730000111174.p ENSGT00730000111086.i ENSGT00940000153761.B.db ENSGT00390000004856.o.b ENSGT00940000159187.k.a ENSGT00390000016695.u ENSGT00940000153259.a.a.b.g.b Salmoninae_a ANCESTRAL SPECIES 55 ENSGT00940000158035.e ENSGT00390000010215.B.k ENSGT00550000074936.j ENSGT00510000048428.g ENSGT00940000158893.q.b ENSGT01080000257365.b.a.b.a.b.j.b ENSGT00990000203615.b.b.b.c.d ENSGT00940000158261.m.b ENSGT00940000159519.g.b ENSGT00950000182818.C.a ENSGT00940000157126.e.f ENSGT00940000159663.e ENSGT00870000136493.d.d ENSGT00940000164937.a.a.b ENSGT00940000156649.c.a.h ENSGT00950000183181.B.b.l.b.a ##22 ENSGT01100000263564.a.m ENSGT00990000204162.c ENSGT00550000075063.v ENSGT00940000161006.m ENSGT00940000160678.a.lc.b ENSGT00390000017608.k.b ENSGT00940000156765.a.a.m.a ENSGT00950000183166.a.a.a.b.e.a.d.b ENSGT00730000111174.p ENSGT00730000111086.i ENSGT00940000153761.B.db ENSGT00390000004856.o.b ENSGT00940000159187.k.a ENSGT00390000016695.u ENSGT00940000153259.a.a.b.g.b Salmo ANCESTRAL SPECIES 7 ENSGT00940000158035.e ENSGT00390000010215.B.k ENSGT00550000074936.j ENSGT00510000048428.g ENSGT00940000158893.q.b ENSGT01080000257365.b.a.b.a.b.j.b ENSGT00990000203615.b.b.b.c.d ENSGT00940000158261.m.b ENSGT00940000159519.g.b ENSGT00950000182818.C.a ENSGT00940000157126.e.f ENSGT00940000159663.e ENSGT00870000136493.d.d ENSGT00940000164937.a.a.b ENSGT00940000156649.c.a.h ENSGT00950000183181.B.b.l.b.a ##22 ENSGT01100000263564.a.m ENSGT00990000204162.c ENSGT00940000161006.m ENSGT00940000160678.a.lc.b ENSGT00390000017608.k.b.b ENSGT00940000156765.a.a.m.a ENSGT00950000183166.a.a.a.b.e.a.d.b ENSGT00730000111174.p ENSGT00730000111086.i ENSGT00940000153761.B.db ENSGT00390000004856.o.b ENSGT00940000159187.k.a ENSGT00390000016695.u ENSGT00940000153259.a.a.b.g.b ENSGT00950000183171.B River trout MODERN SPECIES 18 FAM118B (ENSSTUG00000048111) SRPRA (ENSSTUG00000048060) TIRAP (ENSSTUG00000048057) st3gal4 (ENSSTUG00000048046) KCNJ5 (ENSSTUG00000048041) KCNJ1 (ENSSTUG00000048038) fli1 (ENSSTUG00000048005) ets1 (ENSSTUG00000047874) smtla (ENSSTUG00000047824) KIRREL3 (ENSSTUG00000047210) ENSSTUG00000047159 BARX2 (ENSSTUG00000047156) rbm7 (ENSSTUG00000047152) ENSSTUG00000047148 GRAMD1B (ENSSTUG00000046348) ENSSTUG00000046311 ##22 ENSSTUG00000046307 ENSSTUG00000046303 pglyrp5 (ENSSTUG00000046294) ENSSTUG00000046286 SNRPD2 (ENSSTUG00000046267) VASP (ENSSTUG00000046259) cltcb (ENSSTUG00000045480) cfap45 (ENSSTUG00000045392) slc37a4a (ENSSTUG00000045385) trappc4 (ENSSTUG00000045346) rps25 (ENSSTUG00000045337) sgcg (ENSSTUG00000045324) SACS (ENSSTUG00000045288) tnfrsf19 (ENSSTUG00000045269) MIPEP (ENSSTUG00000043505) Atlantic salmon MODERN SPECIES 12 ilvbl (ENSSSAG00000054660) FAM118B (ENSSSAG00000054594) ENSSSAG00000054273 TIRAP (ENSSSAG00000113375) st3gal4 (ENSSSAG00000054248) KCNJ5 (ENSSSAG00000067822) KCNJ1 (ENSSSAG00000114565) fli1 (ENSSSAG00000054213) ets1 (ENSSSAG00000053896) smtla (ENSSSAG00000053861) KIRREL3 (ENSSSAG00000053550) ENSSSAG00000095193 rbm7 (ENSSSAG00000118917) ENSSSAG00000118310 ENSSSAG00000047168 ENSSSAG00000111471 ##22 ENSSSAG00000082820 ENSSSAG00000112794 ENSSSAG00000047053 pglyrp5 (ENSSSAG00000047046) ENSSSAG00000078442 SMD2 (ENSSSAG00000078433) ENSSSAG00000120107 ENSSSAG00000078122 ENSSSAG00000078066 slc37a4a (ENSSSAG00000078057) RPS25 (ENSSSAG00000078018) trappc4 (ENSSSAG00000095081) sgcg (ENSSSAG00000078004) SACS (ENSSSAG00000077992) TNFRSF19 (ENSSSAG00000116770) Oncorhynchus ANCESTRAL SPECIES 24 ENSGT00940000158035.e ENSGT00390000010215.B.k ENSGT00550000074936.j ENSGT00510000048428.g ENSGT00940000158893.q.b ENSGT01080000257365.b.a.b.a.b.j.b ENSGT00990000203615.b.b.b.c.d ENSGT00940000158261.m.b ENSGT00940000159519.g.b ENSGT00950000182818.C.a ENSGT00940000157126.e.f ENSGT00940000159663.e ENSGT00870000136493.d.d ENSGT00940000164937.a.a.b ENSGT00940000156649.c.a.h ENSGT00950000183181.B.b.l.b.a ##22 ENSGT01100000263564.a.m ENSGT00990000204162.c ENSGT00550000075063.v ENSGT00940000161006.m ENSGT00940000160678.a.lc.b ENSGT00390000017608.k.b ENSGT00940000156765.a.a.m.a ENSGT00950000183166.a.a.a.b.e.a.d.b ENSGT00730000111086.i ENSGT00940000153761.B.db ENSGT00390000004856.o.b ENSGT00940000159187.k.a ENSGT00390000016695.u ENSGT00940000153259.a.a.b.g.b ENSGT00950000183107.a.b.a.e.b Oncorhynchus_a ANCESTRAL SPECIES 25 ENSGT00390000010215.B.k ENSGT00550000074936.j ENSGT00510000048428.g ENSGT00940000158893.q.b ENSGT01080000257365.b.a.b.a.b.j.b ENSGT00990000203615.b.b.b.c.d ENSGT00940000158261.m.b ENSGT00940000159519.g.b ENSGT00950000182818.C.a ENSGT00940000157126.e.f ENSGT00940000159663.e ENSGT00870000136493.d.d ENSGT00940000164201.c.b.b.d ENSGT00940000164937.a.a.b ENSGT00940000156649.c.a.h ENSGT00950000183181.B.b.l.b.a ##22 ENSGT01100000263564.a.m ENSGT00990000204162.c ENSGT00550000075063.v ENSGT00940000161006.m ENSGT00940000160678.a.lc.b ENSGT00390000017608.k.b ENSGT00940000156765.a.a.m.a ENSGT00950000183166.a.a.a.b.e.a.d.b ENSGT00730000111086.i ENSGT00940000153761.B.db ENSGT00390000004856.o.b ENSGT00940000159187.k.a ENSGT00390000016695.u ENSGT00940000153259.a.a.b.g.b ENSGT00950000183107.a.b.a.e.b Coho salmon MODERN SPECIES 6 FAM118B (ENSOKIG00005039115) SRPRA (ENSOKIG00005039086) TIRAP (ENSOKIG00005039078) st3gal4 (ENSOKIG00005039015) KCNJ5 (ENSOKIG00005039003) KCNJ1 (ENSOKIG00005038994) fli1 (ENSOKIG00005038955) ets1 (ENSOKIG00005038776) smtla (ENSOKIG00005038704) KIRREL3 (ENSOKIG00005038311) BARX2 (ENSOKIG00005038268) rbm7 (ENSOKIG00005038248) ENSOKIG00005038194 ENSOKIG00005038183 ENSOKIG00005036017 ENSOKIG00005035910 ##22 ENSOKIG00005035899 ENSOKIG00005035890 polr2i (ENSOKIG00005035837) pglyrp5 (ENSOKIG00005035737) ENSOKIG00005035728 SNRPD2 (ENSOKIG00005035683) VASP (ENSOKIG00005035658) ENSOKIG00005031199 SLC37A4 (ENSOKIG00005030874) CFAP45 (ENSOKIG00005030846) trappc4 (ENSOKIG00005030730) ENSOKIG00005030669 sgcg (ENSOKIG00005030640) SACS (ENSOKIG00005030615) TNFRSF19 (ENSOKIG00005030602) Chinook salmon MODERN SPECIES 4 SRPRA (ENSOTSG00005009481) TIRAP (ENSOTSG00005009475) st3gal4 (ENSOTSG00005009473) KCNJ5 (ENSOTSG00005009471) KCNJ1 (ENSOTSG00005009470) fli1 (ENSOTSG00005009469) ets1 (ENSOTSG00005009468) smtla (ENSOTSG00005009464) KIRREL3 (ENSOTSG00005009345) BARX2 (ENSOTSG00005009343) rbm7 (ENSOTSG00005009342) ENSOTSG00005009341 ENSOTSG00005009319 ENSOTSG00005009317 GRAMD1B (ENSOTSG00005006200) ENSOTSG00005006185 ##22 ENSOTSG00005006184 ENSOTSG00005006183 ENSOTSG00005006173 pglyrp5 (ENSOTSG00005006132) ENSOTSG00005006128 SNRPD2 (ENSOTSG00005006101) VASP (ENSOTSG00005006100) cltcb (ENSOTSG00005002831) slc37a4a (ENSOTSG00005002737) trappc4 (ENSOTSG00005002733) rps25 (ENSOTSG00005002708) sgcg (ENSOTSG00005002703) SACS (ENSOTSG00005002699) tnfrsf19 (ENSOTSG00005002694) ENSOTSG00005002691 Rainbow trout MODERN SPECIES 19 ENSOMYG00000047384 TIRAP (ENSOMYG00000047353) st3gal4 (ENSOMYG00000047344) ENSOMYG00000052113 KCNJ5 (ENSOMYG00000047337) KCNJ1 (ENSOMYG00000047334) fli1 (ENSOMYG00000047321) ENSOMYG00000047305 ets1 (ENSOMYG00000047293) smtla (ENSOMYG00000047268) KIRREL3 (ENSOMYG00000047228) ENSOMYG00000047200 rbm7 (ENSOMYG00000047198) ENSOMYG00000047197 ENSOMYG00000047186 ENSOMYG00000047173 ##22 c5ar (ENSOMYG00000047172) ENSOMYG00000047170 ENSOMYG00000048049 ENSOMYG00000047166 ENSOMYG00000047157 ENSOMYG00000047145 ENSOMYG00000047144 ENSOMYG00000047134 ENSOMYG00000047092 ENSOMYG00000047085 rs25 (ENSOMYG00000047081) sgcg (ENSOMYG00000047075) SACS (ENSOMYG00000047070) TNFRSF19 (ENSOMYG00000047063) ENSOMYG00000069171 Huchen MODERN SPECIES 181 ENSHHUG00000003158 ENSHHUG00000003156 ets1 (ENSHHUG00000003111) smtla (ENSHHUG00000003079) KIRREL3 (ENSHHUG00000002995) BARX2 (ENSHHUG00000002987) rbm7 (ENSHHUG00000002979) ENSHHUG00000002970 ENSHHUG00000002495 ENSHHUG00000002485 ##22 ENSHHUG00000002477 ENSHHUG00000002467 ENSHHUG00000002458 polr2i (ENSHHUG00000002435) pglyrp5 (ENSHHUG00000002415) snrpd2 (ENSHHUG00000002309) VASP (ENSHHUG00000002297) ENSHHUG00000002290 ENSHHUG00000002217 cfap45 (ENSHHUG00000002165) trappc4 (ENSHHUG00000002026) rps25 (ENSHHUG00000001941) sgcg (ENSHHUG00000001927) ENSHHUG00000001868 ENSHHUG00000001864 Salmoninae ANCESTRAL SPECIES 974 ENSGT00940000156649.c.a.g ENSGT00950000183181.B.b.l.b.b ##22 ENSGT01100000263564.a.n ENSGT00990000204162.d ENSGT00550000075063.u ENSGT00940000161006.n Salmoninae_a ANCESTRAL SPECIES 3 ENSGT00390000010215.B.l ENSGT00550000074936.i ENSGT00510000048428.h ENSGT00940000158893.q.a ENSGT01080000257365.b.a.b.a.b.j.a ENSGT00990000203615.b.b.b.c.c ENSGT00940000158261.m.a ENSGT00940000159519.g.a ENSGT00940000179594 ENSGT00940000157126.e.e ENSGT00940000159663.f ENSGT00870000136493.d.c ENSGT00940000164201.c.b.b ENSGT00940000164937.a.a.a ENSGT00940000156649.c.a.g ENSGT00950000183181.B.b.l.b.b ##22 ENSGT01100000263564.a.n ENSGT00990000204162.d ENSGT00550000075063.u ENSGT00940000161006.n ENSGT00940000160678.a.lc.a ENSGT00390000017608.k.a ENSGT00940000156765.a.a.m.b ENSGT00950000183166.a.a.a.b.e.a.d.a ENSGT00730000111174.o ENSGT00730000111086.j ENSGT00940000153761.B.eb ENSGT00390000004856.o.a ENSGT00940000159187.k.b ENSGT00390000016695.v ENSGT00940000153259.a.a.b.g.a Salmo ANCESTRAL SPECIES 22 ENSGT00390000010215.B.l ENSGT00550000074936.i ENSGT00510000048428.h ENSGT00940000158893.q.a ENSGT01080000257365.b.a.b.a.b.j.a ENSGT00990000203615.b.b.b.c.c ENSGT00940000158261.m.a ENSGT00940000159519.g.a ENSGT00940000179594 ENSGT00940000157126.e.e ENSGT00940000159663.f ENSGT00870000136493.d.c ENSGT00940000164201.c.b.b ENSGT00940000164937.a.a.a ENSGT00940000156649.c.a.g ENSGT00950000183181.B.b.l.b.b ##22 ENSGT01100000263564.a.n ENSGT00550000075063.u ENSGT00990000204162.d ENSGT00550000075063.v ENSGT00940000161006.n ENSGT00940000160678.a.lc.a ENSGT00390000017608.k.b.a ENSGT00940000156765.a.a.n ENSGT00940000156765.a.a.m.b ENSGT00950000183166.a.a.a.b.e.a.d.a ENSGT00730000111174.o ENSGT00730000111086.j ENSGT00940000153761.B.eb ENSGT00390000004856.o.a ENSGT00940000159187.k.b River trout MODERN SPECIES 4 SRPRA (ENSSTUG00000032666) TIRAP (ENSSTUG00000032645) st3gal4 (ENSSTUG00000032622) ENSSTUG00000032617 KCNJ5 (ENSSTUG00000032612) KCNJ1 (ENSSTUG00000032594) fli1 (ENSSTUG00000032548) ets1 (ENSSTUG00000032210) ENSSTUG00000032144 KIRREL3 (ENSSTUG00000031387) BARX2 (ENSSTUG00000031350) rbm7 (ENSSTUG00000031344) ENSSTUG00000031236 ENSSTUG00000031222 GRAMD1B (ENSSTUG00000031028) DACT3 (ENSSTUG00000031015) ##22 ENSSTUG00000031014 ENSSTUG00000031010 polr2i (ENSSTUG00000031006) pglyrp5 (ENSSTUG00000030997) ENSSTUG00000030994 SNRPD2 (ENSSTUG00000030986) VASP (ENSSTUG00000030972) cltcb (ENSSTUG00000030472) cfap45 (ENSSTUG00000030398) slc37a4a (ENSSTUG00000030372) trappc4 (ENSSTUG00000030342) rps25 (ENSSTUG00000030267) sgcg (ENSSTUG00000030248) SACS (ENSSTUG00000030213) tnfrsf19 (ENSSTUG00000030193) Atlantic salmon MODERN SPECIES 28 st3gal4 (ENSSSAG00000099727) ENSSSAG00000095107 KCNJ5 (ENSSSAG00000054238) KCNJ1 (ENSSSAG00000067820) fli1 (ENSSSAG00000067812) ets1 (ENSSSAG00000067800) ENSSSAG00000067789 ENSSSAG00000104796 KIRREL3 (ENSSSAG00000066955) ENSSSAG00000066923 rbm7 (ENSSSAG00000066916) ENSSSAG00000066911 ENSSSAG00000113160 ENSSSAG00000097680 ENSSSAG00000066271 ENSSSAG00000066253 ##22 ENSSSAG00000089811 ENSSSAG00000066243 pglyrp5 (ENSSSAG00000066236) ENSSSAG00000066232 SMD2 (ENSSSAG00000066218) ENSSSAG00000066204 ENSSSAG00000065798 ENSSSAG00000065732 ENSSSAG00000065718 RPS25 (ENSSSAG00000065665) trappc4 (ENSSSAG00000094815) ENSSSAG00000077967 ENSSSAG00000065588 BRWD1 (ENSSSAG00000051173) WRB (ENSSSAG00000050810) Oncorhynchus ANCESTRAL SPECIES 14 ENSGT00390000010215.B.l ENSGT00550000074936.i ENSGT00510000048428.h ENSGT00940000158893.q.a ENSGT01080000257365.b.a.b.a.b.j.a ENSGT00990000203615.b.b.b.c.c ENSGT00940000158261.m.a ENSGT00940000159519.g.a ENSGT00940000179594 ENSGT00940000157126.e.e ENSGT00940000159663.f ENSGT00870000136493.d.c ENSGT00940000164201.c.b.b ENSGT00940000164937.a.a.a ENSGT00940000156649.c.a.g ENSGT00950000183181.B.b.l.b.b ##22 ENSGT01100000263564.a.n ENSGT00990000204162.d ENSGT00550000075063.u ENSGT00940000161006.n ENSGT00940000160678.a.lc.a ENSGT00390000017608.k.a ENSGT00940000156765.a.a.m.b ENSGT00950000183166.a.a.a.b.e.a.d.a ENSGT00730000111174.o ENSGT00730000111086.j.b ENSGT00940000153761.B.eb ENSGT00390000004856.o.a ENSGT00940000159187.k.b ENSGT00390000016695.v ENSGT00940000153259.a.a.b.g.a Rainbow trout MODERN SPECIES 16 ENSOMYG00000040486 ilvbl (ENSOMYG00000040112) FAM118B (ENSOMYG00000040059) ENSOMYG00000040019 TIRAP (ENSOMYG00000039982) st3gal4 (ENSOMYG00000039973) KCNJ5 (ENSOMYG00000039965) KCNJ1 (ENSOMYG00000039959) fli1 (ENSOMYG00000039935) ets1 (ENSOMYG00000039781) KIRREL3 (ENSOMYG00000039450) ENSOMYG00000039343 rbm7 (ENSOMYG00000064869) ENSOMYG00000039240 ENSOMYG00000038060 ENSOMYG00000037831 ##22 ENSOMYG00000037821 ENSOMYG00000037815 polr2i (ENSOMYG00000037806) pglyrp5 (ENSOMYG00000037788) ENSOMYG00000037780 ENSOMYG00000037766 ENSOMYG00000037738 ENSOMYG00000035945 ENSOMYG00000035642 ENSOMYG00000033985 slc37a4a (ENSOMYG00000035630) trappc4 (ENSOMYG00000035598) RPS25 (ENSOMYG00000035561) ENSOMYG00000053574 sgcg (ENSOMYG00000035538) Oncorhynchus_a ANCESTRAL SPECIES 32 ENSGT00940000158035.f ENSGT00390000010215.B.l ENSGT00550000074936.i ENSGT00940000158893.q.a ENSGT01080000257365.b.a.b.a.b.j.a ENSGT00990000203615.b.b.b.c.c ENSGT00940000158261.m.a ENSGT00940000159519.g.a ENSGT00940000179594 ENSGT00940000157126.e.e ENSGT00940000159663.f ENSGT00870000136493.d.c ENSGT00940000164201.c.b.b.c ENSGT00940000164937.a.a.a ENSGT00940000156649.c.a.g ENSGT00950000183181.B.b.l.b.b ##22 ENSGT01100000263564.a.n ENSGT00990000204162.d ENSGT00550000075063.u ENSGT00940000161006.n ENSGT00940000160678.a.lc.a ENSGT00390000017608.k.a ENSGT00940000156765.a.a.m.b ENSGT00950000183166.a.a.a.b.e.a.d.a ENSGT00730000111174.o ENSGT00730000111086.j.b ENSGT00940000153761.B.eb ENSGT00390000004856.o.a ENSGT00940000159187.k.b ENSGT00390000016695.v ENSGT00940000153259.a.a.b.g.a Chinook salmon MODERN SPECIES 5 ilvbl (ENSOTSG00005041920) FAM118B (ENSOTSG00005041919) SRPRA (ENSOTSG00005040202) st3gal4 (ENSOTSG00005040198) KCNJ5 (ENSOTSG00005040195) KCNJ1 (ENSOTSG00005040194) fli1 (ENSOTSG00005040193) ets1 (ENSOTSG00005039889) ENSOTSG00005039887 KIRREL3 (ENSOTSG00005037144) BARX2 (ENSOTSG00005037137) rbm7 (ENSOTSG00005037134) ENSOTSG00005037131 ENSOTSG00005037128 GRAMD1B (ENSOTSG00005033977) DACT3 (ENSOTSG00005033969) ##22 ENSOTSG00005033968 ENSOTSG00005033967 polr2i (ENSOTSG00005033966) pglyrp5 (ENSOTSG00005033965) ENSOTSG00005033963 SNRPD2 (ENSOTSG00005015452) VASP (ENSOTSG00005015451) cltcb (ENSOTSG00005014714) cfap45 (ENSOTSG00005014709) slc37a4a (ENSOTSG00005014708) trappc4 (ENSOTSG00005014690) rps25 (ENSOTSG00005014688) sgcg (ENSOTSG00005014687) SACS (ENSOTSG00005014685) tnfrsf19 (ENSOTSG00005014683) Huchen MODERN SPECIES 1855 ENSHHUG00000006557 ENSHHUG00000006865 ##22 ENSHHUG00000006869 ENSHHUG00000006871 ENSHHUG00000006881 polr2i (ENSHHUG00000006889) pglyrp5 (ENSHHUG00000006914) ENSHHUG00000006920 snrpd2 (ENSHHUG00000006927) ENSHHUG00000006996 Otomorpha ANCESTRAL SPECIES 214 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00990000204162 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.k.a ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00940000157189.d ENSGT00920000149201 ENSGT00510000048522.i.a ENSGT00940000165006 ENSGT01100000263475.f.b ENSGT00390000011517.a.b ENSGT00940000162662 Clupeiformes ANCESTRAL SPECIES 171 ENSGT00940000158882 ENSGT00940000158439.m ENSGT00390000006454 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00990000204162 ENSGT00550000075063 ENSGT00940000161006 ENSGT00940000167604 ENSGT00390000017608.k.a ENSGT00390000017608.l ENSGT00940000156765.a.a ENSGT00940000157189.d ENSGT00920000149201 ENSGT00510000048522.i.a ENSGT00940000165006 ENSGT01100000263475.f.b ENSGT00390000011517.a.b ENSGT00950000182987.c.a.b.b Atlantic herring MODERN SPECIES 25 tbx2b (ENSCHAG00000009401) bcas3 (ENSCHAG00000009069) ENSCHAG00000009030 st3gal4 (ENSCHAG00000009012) KCNJ5 (ENSCHAG00000008999) KCNJ1 (ENSCHAG00000008970) KCNJ1 (ENSCHAG00000008955) fli1 (ENSCHAG00000008850) ets1 (ENSCHAG00000008811) smtla (ENSCHAG00000008216) KIRREL3 (ENSCHAG00000005928) BARX2 (ENSCHAG00000005792) rbm7 (ENSCHAG00000005777) ENSCHAG00000005769 GRAMD1B (ENSCHAG00000004791) ENSCHAG00000004704 ##22 ENSCHAG00000004685 ENSCHAG00000004672 ENSCHAG00000004653 polr2i (ENSCHAG00000004584) pglyrp5 (ENSCHAG00000004567) ENSCHAG00000004519 snrpd2 (ENSCHAG00000004420) ENSCHAG00000004397 akt2 (ENSCHAG00000004219) ccnp (ENSCHAG00000004195) si:ch211-132b12.7 (ENSCHAG00000004178) si:ch211-132b12.2 (ENSCHAG00000003731) ENSCHAG00000003700 ENSCHAG00000003681 ENSCHAG00000003574 Denticle herring MODERN SPECIES 4 tbx4 (ENSDCDG00000011985) tbx2b (ENSDCDG00000012002) bcas3 (ENSDCDG00000012137) ENSDCDG00000012456 st3gal4 (ENSDCDG00000012465) KCNJ5 (ENSDCDG00000012517) kcnj1a.4 (ENSDCDG00000012732) fli1 (ENSDCDG00000012738) ets1 (ENSDCDG00000012745) smtla (ENSDCDG00000012808) KIRREL3 (ENSDCDG00000013619) BARX2 (ENSDCDG00000017117) rbm7 (ENSDCDG00000017119) ENSDCDG00000017121 GRAMD1B (ENSDCDG00000017183) ENSDCDG00000020694 ##22 fabp1a (ENSDCDG00000020696) C5AR1 (ENSDCDG00000020698) ENSDCDG00000020700 polr2i (ENSDCDG00000020703) pglyrp5 (ENSDCDG00000020708) ENSDCDG00000020710 snrpd2 (ENSDCDG00000020712) VASP (ENSDCDG00000020716) akt2 (ENSDCDG00000020726) ccnp (ENSDCDG00000020777) si:ch211-132b12.7 (ENSDCDG00000020778) ENSDCDG00000020780 ENSDCDG00000020781 ENSDCDG00000020797 ENSDCDG00000021461 Otophysi ANCESTRAL SPECIES 36 ENSGT00390000010215.B ENSGT00550000074936 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00990000204162 Characiphysae ANCESTRAL SPECIES 12 ENSGT00390000011517.a.b ENSGT00940000165006 ENSGT00990000203615.b.b.b.g.a.a.b ENSGT00990000203615.b.b.b.g.a.b ENSGT00990000203615.b.b.b.g.a.a.a.a ENSGT00990000203615.b.b.b.g.a.a.a.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00990000204162 Characiphysae_b ANCESTRAL SPECIES 85 ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00990000204162 ENSGT01100000263515.a.b.a.a.c ENSGT00390000018660 ENSGT00940000162060.c ENSGT00940000159135.g ENSGT00940000165173 ENSGT00940000155368 ENSGT00390000000970 ENSGT00940000156760.e.b ENSGT00940000156760.f ENSGT00940000160473 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00390000004493 Characoidei ANCESTRAL SPECIES 98 ENSGT00940000156649.d ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00990000204162 ENSGT01100000263515.a.b.a.a.c ENSGT00390000018660 ENSGT00940000162060.c ENSGT00940000159135.g ENSGT00940000165173 ENSGT00940000155368 ENSGT00390000000970 ENSGT00940000156760.e.b ENSGT00940000156760.f ENSGT00940000160473 ENSGT00390000006591 ENSGT00940000154019.a ENSGT00390000004493 Red-bellied piranha MODERN SPECIES 744 ENSPNAG00000014978 ENSPNAG00000014961 ENSPNAG00000014887 ##22 C5AR1 (ENSPNAG00000014877) ENSPNAG00000003306 Mexicana tetra MODERN SPECIES 9 FRMD5 (ENSAMXG00000016956) ENSAMXG00000041909 ENSAMXG00000016970 ctsh (ENSAMXG00000039984) RASGRF1 (ENSAMXG00000017015) ENSAMXG00000025198 idh2 (ENSAMXG00000007438) znf710a (ENSAMXG00000007435) sema4ba (ENSAMXG00000037313) zgc:162879 (ENSAMXG00000007430) SERF2 (ENSAMXG00000007428) ENSAMXG00000007423 ENSAMXG00000029267 ENSAMXG00000037758 ENSAMXG00000007963 ENSAMXG00000040836 ##22 ENSAMXG00000025906 ENSAMXG00000037258 veph1 (ENSAMXG00000010844) PTX3 (ENSAMXG00000041282) ENSAMXG00000038923 ENSAMXG00000010827 ccnl1a (ENSAMXG00000010800) ENSAMXG00000037577 TIPARP (ENSAMXG00000033452) ssr3 (ENSAMXG00000034367) kcnab1a (ENSAMXG00000043084) ENSAMXG00000030419 gmps (ENSAMXG00000029474) slc33a1 (ENSAMXG00000035355) c18h3orf33 (ENSAMXG00000040372) Electric eel MODERN SPECIES 605 ENSEEEG00000015870 ENSEEEG00000015868 ##22 C5AR1 (ENSEEEG00000015867) ENSEEEG00000015866 ENSEEEG00000015863 veph1 (ENSEEEG00000015853) ENSEEEG00000015847 ccnl1a (ENSEEEG00000015731) ENSEEEG00000015729 ENSEEEG00000015728 tiparp (ENSEEEG00000015727) Channel catfish MODERN SPECIES 23 ENSIPUG00000009020 KCNJ1 (ENSIPUG00000009058) KCNJ1 (ENSIPUG00000009062) KCNJ1 (ENSIPUG00000009076) KCNJ1 (ENSIPUG00000009090) KCNJ1 (ENSIPUG00000009103) fli1 (ENSIPUG00000009118) ets1 (ENSIPUG00000009227) KIRREL3 (ENSIPUG00000009294) barx2 (ENSIPUG00000009386) rbm7 (ENSIPUG00000009397) ENSIPUG00000009436 ENSIPUG00000009455 ENSIPUG00000009466 ENSIPUG00000009482 ENSIPUG00000009552 ##22 ENSIPUG00000009558 ENSIPUG00000009567 CHST8 (ENSIPUG00000009578) ENSIPUG00000009594 KCTD15 (ENSIPUG00000009640) ENSIPUG00000009666 lsm14a (ENSIPUG00000009720) kiaa0355 (ENSIPUG00000009759) ss18l2 (ENSIPUG00000009811) gpi (ENSIPUG00000009854) wtip (ENSIPUG00000010060) ENSIPUG00000010090 ENSIPUG00000010096 sdr42e1 (ENSIPUG00000010111) thsd4 (ENSIPUG00000010126) Cyprinoidei ANCESTRAL SPECIES 12 ENSGT00940000157454 ENSGT00940000155666.d ENSGT00390000018039 ENSGT00510000048428 ENSGT00940000158893 ENSGT01080000257365.b.a.b.a.b ENSGT00990000203615.b.b.b ENSGT00940000158261 ENSGT00940000159519 ENSGT00950000182818.C.a ENSGT00940000157126.e ENSGT00940000159663 ENSGT00870000136493.d ENSGT00940000164937.a.a ENSGT00940000156649.c.a ENSGT00950000183181.B.b.l.b ##22 ENSGT01100000263564.a ENSGT00990000204162 ENSGT00940000158872 ENSGT00510000048154 ENSGT00940000153313.A ENSGT00940000162537 ENSGT00950000183022.a.a.b.a ENSGT00940000162120 ENSGT00940000166203 ENSGT00950000183059.b.b ENSGT00940000165073.a.b.b.a.c ENSGT00940000160509 ENSGT01030000235127 ENSGT00390000014810.a ENSGT00940000166911 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 217 ENSGT00940000156484.a.a ENSGT00940000157454.m.a ENSGT00940000155666.d.c ENSGT00390000018039.l ENSGT00510000048428.e ENSGT00940000158893.m ENSGT01080000257365.b.a.b.a.b.h.a ENSGT00990000203615.b.b.b.j ENSGT00940000159519.e.a ENSGT00950000182818.C.a.b ENSGT00940000157126.e.c.b ENSGT00940000159663.c.a ENSGT00870000136493.d.b ENSGT00940000164937.a.a.c ENSGT00940000156649.c.a.i ENSGT00950000183181.B.b.l.b.c ##22 ENSGT01100000263564.a.p ENSGT00990000204162.b ENSGT00940000158872.a ENSGT00510000048154.a.b ENSGT00940000153313.A.a Goldfish DUPLICATION Goldfish MODERN SPECIES 9 DUSP8 (ENSCARG00000031775) mob2b (ENSCARG00000031798) ABCC8 (ENSCARG00000031971) ENSCARG00000038997 SCAMP5 (ENSCARG00000039007) loxl1 (ENSCARG00000039013) ENSCARG00000039032 insyn1 (ENSCARG00000039037) ENSCARG00000039042 BARX2 (ENSCARG00000039047) rbm7 (ENSCARG00000039057) ENSCARG00000039083 GRAMD1B (ENSCARG00000039340) ENSCARG00000043283 ##22 ENSCARG00000043302 ENSCARG00000043318 ##22 ENSCARG00000043334 ENSCARG00000043354 dner (ENSCARG00000043426) pid1 (ENSCARG00000043758) ENSCARG00000043773 ENSCARG00000043805 slc19a3b (ENSCARG00000043986) irf2bp1 (ENSCARG00000044015) foxa3 (ENSCARG00000044023) PLD3 (ENSCARG00000044050) ENSCARG00000044210 kcnk6 (ENSCARG00000044216) sertad3 (ENSCARG00000044230) blvrb (ENSCARG00000044236) ENSCARG00000044392 Goldfish MODERN SPECIES 9 ENSCARG00000031091 cntn5 (ENSCARG00000031654) DUSP8 (ENSCARG00000031775) mob2b (ENSCARG00000031798) ABCC8 (ENSCARG00000031971) ENSCARG00000038997 SCAMP5 (ENSCARG00000039007) loxl1 (ENSCARG00000039013) ENSCARG00000039032 insyn1 (ENSCARG00000039037) ENSCARG00000039042 BARX2 (ENSCARG00000039047) rbm7 (ENSCARG00000039057) ENSCARG00000039083 GRAMD1B (ENSCARG00000039340) ENSCARG00000043283 ##22 ENSCARG00000043302 ENSCARG00000043318 ##22 ENSCARG00000043334 ENSCARG00000043354 dner (ENSCARG00000043426) pid1 (ENSCARG00000043758) ENSCARG00000043773 ENSCARG00000043805 slc19a3b (ENSCARG00000043986) irf2bp1 (ENSCARG00000044015) foxa3 (ENSCARG00000044023) PLD3 (ENSCARG00000044050) ENSCARG00000044210 kcnk6 (ENSCARG00000044216) sertad3 (ENSCARG00000044230) Cyprininae_a ANCESTRAL SPECIES 225 ENSGT00940000157126.e.c.b ENSGT00940000159663.c.a ENSGT00870000136493.d.b ENSGT00940000164937.a.a.c ENSGT00940000156649.c.a.i ENSGT00950000183181.B.b.l.b.c ##22 ENSGT01100000263564.a.p ENSGT00990000204162.b ENSGT00940000158872.a ENSGT00510000048154.a.b ENSGT00510000048154.b ENSGT00940000153313.A.a ENSGT00940000167309.a ENSGT00940000162120.a ENSGT00940000166203.a ENSGT00950000183059.b.b.b ENSGT00940000165073.a.b.b.a.c ENSGT00940000165073.a.a.k ENSGT00940000165073.a.b.b.a.d ENSGT00940000160509.f ENSGT01030000235127.a Common carp reference MODERN SPECIES 19 ppp1r37 (ENSCCRG00000025710) bmp16 (ENSCCRG00000025775) ENSCCRG00000003013 st3gal4 (ENSCCRG00000027634) ENSCCRG00000062570 KCNJ5 (ENSCCRG00000052814) KCNJ1 (ENSCCRG00000040981) fli1 (ENSCCRG00000017909) ets1 (ENSCCRG00000004213) smtla (ENSCCRG00000007925) KIRREL3 (ENSCCRG00000044345) ENSCCRG00000077434 rbm7 (ENSCCRG00000028774) ENSCCRG00000068230 ENSCCRG00000016373 ENSCCRG00000039287 ##22 ENSCCRG00000056974 dner (ENSCCRG00000009974) pid1 (ENSCCRG00000055569) sphkap (ENSCCRG00000033812) ENSCCRG00000073138 irf2bp1 (ENSCCRG00000056092) foxa3 (ENSCCRG00000034162) ENSCCRG00000021461 ENSCCRG00000021454 ENSCCRG00000063267 kcnk6 (ENSCCRG00000054796) sertad3 (ENSCCRG00000061483) blvrb (ENSCCRG00000034196) ENSCCRG00000033338 pcyt1ab (ENSCCRG00000024722) Golden-line barbel MODERN SPECIES 709 KIRREL3 (ENSSGRG00000052163) rbm7 (ENSSGRG00000052165) ENSSGRG00000052166 GRAMD1B (ENSSGRG00000052169) ENSSGRG00000052220 ##22 ENSSGRG00000052221 ENSSGRG00000052222 Cyprininae ANCESTRAL SPECIES 282 ENSGT00940000157126.e.c.a ENSGT00940000159663.c.b ENSGT00870000136493.d.a ENSGT00940000164937.a.a.d ENSGT00940000156649.c.a.j ENSGT00950000183181.B.b.l.b.d ##22 ENSGT01100000263564.a.o ENSGT00990000204162.a ENSGT00940000158872.b ENSGT00510000048154.a.a ENSGT00510000048154.b ENSGT00940000153313.A.b ENSGT00940000167309.a ENSGT00950000183022.a.a.b.a ENSGT00940000162120 ENSGT00940000166203 ENSGT00950000183059.b.b.b ENSGT00940000165073.a.b.b.a.c ENSGT00940000160509.e ENSGT00390000014810.a.b ENSGT01030000235127.b Cyprininae_a ANCESTRAL SPECIES 105 ENSGT00940000155666.d.d ENSGT00390000018039.k ENSGT00510000048428.f ENSGT00940000158893.n ENSGT01080000257365.b.a.b.a.b.h.b ENSGT00990000203615.b.b.b.i ENSGT00940000158261.r ENSGT00940000159519.f ENSGT00940000159519.e.b ENSGT00950000182818.C.a.a ENSGT00940000157126.e.c.a ENSGT00940000159663.c.b ENSGT00870000136493.d.a ENSGT00940000164937.a.a.d ENSGT00940000156649.c.a.j ENSGT00950000183181.B.b.l.b.d ##22 ENSGT01100000263564.a.o ENSGT00990000204162.a ENSGT00940000158872.b ENSGT00510000048154.a.a ENSGT00940000153313.A.b ENSGT00950000183022.a.a.b.a ENSGT00940000162120.b ENSGT00940000166203.b ENSGT00940000160509.e ENSGT00390000014810.a.b ENSGT01030000235127.b ENSGT00390000014810.a.a.a ENSGT00940000156343.lb.a.f ENSGT00940000157384.b.a ENSGT00940000165683.b Common carp reference MODERN SPECIES 9 bmp16 (ENSCCRG00000071794) gemin7 (ENSCCRG00000042941) ENSCCRG00000016953 st3gal4 (ENSCCRG00000072731) KCNJ5 (ENSCCRG00000025196) KCNJ1 (ENSCCRG00000070562) fli1 (ENSCCRG00000040993) ets1 (ENSCCRG00000037742) smtla (ENSCCRG00000067121) KIRREL3 (ENSCCRG00000044482) ENSCCRG00000065375 ENSCCRG00000059349 rbm7 (ENSCCRG00000042084) ENSCCRG00000071253 ENSCCRG00000071918 ENSCCRG00000074265 ##22 ENSCCRG00000076838 dner (ENSCCRG00000014506) pid1 (ENSCCRG00000061146) sphkap (ENSCCRG00000054266) ENSCCRG00000034155 slc19a3b (ENSCCRG00000034158) irf2bp1 (ENSCCRG00000034159) foxa3 (ENSCCRG00000081408) ENSCCRG00000028419 kcnk6 (ENSCCRG00000034180) sertad3 (ENSCCRG00000077593) blvrb (ENSCCRG00000034183) ENSCCRG00000056362 ENSCCRG00000012619 pcyt1ab (ENSCCRG00000065713) Goldfish MODERN SPECIES 37 ilvbl (ENSCARG00000068457) FAM118B (ENSCARG00000068403) SRPRA (ENSCARG00000068369) ENSCARG00000068353 arfgap2 (ENSCARG00000068066) ENSCARG00000068045 pex16 (ENSCARG00000068032) ENSCARG00000068029 large2 (ENSCARG00000067584) ENSCARG00000067528 KIRREL3 (ENSCARG00000067082) BARX2 (ENSCARG00000067025) rbm7 (ENSCARG00000067012) ENSCARG00000067001 GRAMD1B (ENSCARG00000066690) ENSCARG00000066671 ##22 ENSCARG00000066666 ENSCARG00000066661 dner (ENSCARG00000066463) pid1 (ENSCARG00000066427) ENSCARG00000066416 sphkap (ENSCARG00000066368) ENSCARG00000066235 irf2bp1 (ENSCARG00000066224) foxa3 (ENSCARG00000066211) PLD3 (ENSCARG00000066182) ENSCARG00000066166 kcnk6 (ENSCARG00000066153) sertad3 (ENSCARG00000066149) blvrb (ENSCARG00000066139) ENSCARG00000066127 Cyclostomata ANCESTRAL SPECIES 634 ENSGT00390000008727.a.b #14 ENSGT00950000183181.B #22 Hagfish MODERN SPECIES 668 PC (ENSEBUG00000002314) ENSEBUG00000003611 ENSEBUG00000009684 PC (ENSEBUG00000014406) DHX57 (ENSEBUG00000009761) ENSEBUG00000013523 dcakd (ENSEBUG00000006237) ENSEBUG00000007300 ENSEBUG00000011181 OtxA (ENSEBUG00000002616) #9 ENSEBUG00000015112 #14 ENSEBUG00000010613 #22 rtraf (ENSEBUG00000012211) ENSEBUG00000002424 CHRM3 (ENSEBUG00000002141) ENSEBUG00000001277 ENSEBUG00000010967 slc8a1a (ENSEBUG00000012478) ACTR2 (ENSEBUG00000006868) DPH6 (ENSEBUG00000010833) ENSEBUG00000010906 hectd1 (ENSEBUG00000008319) ENSEBUG00000015277 ENSEBUG00000007863 aida (ENSEBUG00000012967) ENSEBUG00000005359 #8 ENSEBUG00000015925