Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00390000004757.`b.a	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000154723.b.m.a	ENSGT00940000162892.a.a.b	ENSGT00940000154723.b.m.b	ENSGT00940000162892.a.a.a	ENSGT00940000154993.m.a.b #18	ENSGT00940000154993.m.b ##18	ENSGT00940000154993.m.a.a #19	ENSGT00940000160997 #20	ENSGT00530000064839 #21	ENSGT00940000163287 #22	ENSGT00390000002471 #23	ENSGT00940000160293 #24	ENSGT00890000139566 #25	ENSGT00390000014107.a.b #26	ENSGT00390000008726.h.b #27	ENSGT00940000162975	ENSGT00940000155779.a.b #28	ENSGT00940000162382 #29	ENSGT00920000149187 #30	ENSGT00940000160798 #31	ENSGT00940000155565 #32	ENSGT00940000158338.i.a.b #33	ENSGT00940000158338.i.b ##33	ENSGT01030000235045 #36	ENSGT00940000158338.i.a.a #35
Rhinopithecus	ANCESTRAL SPECIES	177	ENSGT00940000160381	ENSGT00390000004757.`b.a.a	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000154723.b.n	ENSGT00940000154723.b.m.b	ENSGT00940000162892.a.a.a	ENSGT00940000154993.m.a.b #18	ENSGT00940000154993.m.b ##18	ENSGT00940000154993.m.a.a #19	ENSGT00940000160997 #20	ENSGT00530000064839 #21	ENSGT00940000163287 #22	ENSGT00390000002471 #23	ENSGT00940000160293 #24	ENSGT00890000139566 #25	ENSGT00390000014107.a.b #26	ENSGT00390000008726.h.b #27	ENSGT00940000155779.a.b #28	ENSGT00940000162382 #29	ENSGT00920000149187 #30	ENSGT00940000160798 #31	ENSGT00940000155565.pc ##32	ENSGT00940000158338.i.a.b.b ##33
Black snub-nosed monkey	MODERN SPECIES	1969												HLA-DRB5 (ENSRBIG00000038672) #18	HLA-DRB1 (ENSRBIG00000034191) #19	HLA-DRA (ENSRBIG00000032211) #20	TSBP1 (ENSRBIG00000030528) #21	NOTCH4 (ENSRBIG00000029510) #22	GPSM3 (ENSRBIG00000026023) #23	PBX2 (ENSRBIG00000035306) #24	ENSRBIG00000035455 #25	RNF5 (ENSRBIG00000036002) #26	AGPAT1 (ENSRBIG00000030064) #27	PPT2 (ENSRBIG00000038686) #28	PRRT1 (ENSRBIG00000034242) #29	FKBPL (ENSRBIG00000029305) #30	ATF6B (ENSRBIG00000022367) #31	ENSRBIG00000039806 #32	ENSRBIG00000041573 #33	ENSRBIG00000034988 #34	CYP21A2 (ENSRBIG00000010273) #35	ENSRBIG00000029440 #36
Golden snub-nosed monkey	MODERN SPECIES	693							HLA-DOB (ENSRROG00000037331)	HLA-DQB1 (ENSRROG00000040533)	HLA-DQA1 (ENSRROG00000035459)	HLA-DRB5 (ENSRROG00000035007) #18	ENSRROG00000043372 ##18	HLA-DRB1 (ENSRROG00000044917) #19	HLA-DRA (ENSRROG00000040020) #20	TSBP1 (ENSRROG00000030352) #21	ENSRROG00000016019	NOTCH4 (ENSRROG00000031561) #22	GPSM3 (ENSRROG00000031880) #23	PBX2 (ENSRROG00000037305) #24	AGER (ENSRROG00000035653) #25	RNF5 (ENSRROG00000038881) #26	AGPAT1 (ENSRROG00000032643) #27	PPT2 (ENSRROG00000029929) #28	PRRT1 (ENSRROG00000021974) #29	FKBPL (ENSRROG00000005462) #30	ATF6B (ENSRROG00000011018) #31	ENSRROG00000040476 ##32	ENSRROG00000031640 ##33
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000154723.b.m.a	ENSGT00940000162892.a.a.b	ENSGT00940000154993.m.a.a.a #19	ENSGT00940000154723.b.m.b	ENSGT00940000162892.a.a.a	ENSGT00940000154993.m.a.b #18	ENSGT00940000154993.m.a.a.b.a.b #19	ENSGT00940000154993.m.b ##18	ENSGT00940000154993.m.a.a.b.b #19	ENSGT00940000160997 #20	ENSGT00530000064839 #21	ENSGT00940000163287 #22	ENSGT00390000002471 #23	ENSGT00940000160293 #24	ENSGT00890000139566 #25	ENSGT00390000014107.a.b #26	ENSGT00390000008726.h.b #27	ENSGT00940000162975	ENSGT00940000155779.a.b #28	ENSGT00940000162382 #29	ENSGT00920000149187 #30	ENSGT00940000160798 #31	ENSGT00940000155565 #32	ENSGT00940000158338.i.a.b #33	ENSGT00940000158338.i.b ##33	ENSGT01030000235045 #36	ENSGT00940000158338.i.a.a #35
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000154723.b.m.a	ENSGT00940000162892.a.a.b	ENSGT00940000154993.m.a.a.a #19	ENSGT00940000154723.b.m.b	ENSGT00940000162892.a.a.a	ENSGT00940000154993.m.a.b #18	ENSGT00940000154993.m.b.a.b ##18	ENSGT00940000154993.m.a.a.b.b #19	ENSGT00940000160997 #20	ENSGT00530000064839 #21	ENSGT00950000183123.h.b	ENSGT00940000163287 #22	ENSGT00390000002471 #23	ENSGT00940000160293 #24	ENSGT00890000139566 #25	ENSGT00390000014107.a.b #26	ENSGT00390000008726.h.b #27	ENSGT00940000162975	ENSGT00940000155779.a.b #28	ENSGT00940000162382 #29	ENSGT00920000149187 #30	ENSGT00940000160798 #31	ENSGT00940000155565 #32	ENSGT00940000158338.i.a.b #33	ENSGT00940000158338.i.b ##33	ENSGT01030000235045 #36	ENSGT00940000155739
Cercopithecinae_b	ANCESTRAL SPECIES	49													ENSGT00940000160997 #20	ENSGT00530000064839 #21	ENSGT00950000183123.h.b	ENSGT00940000163287 #22	ENSGT00390000002471 #23	ENSGT00940000160293 #24	ENSGT00890000139566 #25	ENSGT00390000014107.a.b #26	ENSGT00390000008726.h.b #27	ENSGT00940000155779.a.b #28	ENSGT00940000162382 #29	ENSGT00920000149187 #30	ENSGT00940000160798 #31	ENSGT00940000155565 #32	ENSGT00940000158338.i.a.b #33	ENSGT00940000158338.i.b ##33	ENSGT01030000235045 #36	ENSGT00940000155739	ENSGT00390000018295
Cercopithecinae_d	ANCESTRAL SPECIES	104													ENSGT00940000160997 #20	ENSGT00530000064839 #21	ENSGT00950000183123.h.b	ENSGT00940000163287 #22	ENSGT00390000002471 #23	ENSGT00940000160293 #24	ENSGT00890000139566 #25	ENSGT00390000014107.a.b #26	ENSGT00390000008726.h.b #27	ENSGT00940000155779.a.b #28	ENSGT00940000162382 #29	ENSGT00920000149187 #30	ENSGT00940000160798 #31	ENSGT00940000155565 #32	ENSGT00940000158338.i.a.b #33	ENSGT00940000158338.i.b ##33	ENSGT01030000235045 #36	ENSGT00940000155739	ENSGT00390000018295
Sooty mangabey	MODERN SPECIES	432													HLA-DRA (ENSCATG00000045179) #20	TSBP1 (ENSCATG00000036525) #21	ENSCATG00000021833	NOTCH4 (ENSCATG00000038747) #22	GPSM3 (ENSCATG00000008535) #23	PBX2 (ENSCATG00000027532) #24	AGER (ENSCATG00000035406) #25	RNF5 (ENSCATG00000029632) #26	AGPAT1 (ENSCATG00000036720) #27	PPT2 (ENSCATG00000036240) #28	PRRT1 (ENSCATG00000034775) #29	FKBPL (ENSCATG00000017791) #30	ATF6B (ENSCATG00000030679) #31	TNXB (ENSCATG00000031834) #32	CYP21A2 (ENSCATG00000031244) #33
Drill	MODERN SPECIES	1628														ENSMLEG00000037625 #21	ENSMLEG00000033654	NOTCH4 (ENSMLEG00000028646) #22	GPSM3 (ENSMLEG00000043901) #23	PBX2 (ENSMLEG00000035885) #24	AGER (ENSMLEG00000000793) #25	RNF5 (ENSMLEG00000037504) #26	AGPAT1 (ENSMLEG00000040906) #27	PPT2 (ENSMLEG00000038664) #28	PRRT1 (ENSMLEG00000018414) #29	FKBPL (ENSMLEG00000001506) #30	ATF6B (ENSMLEG00000033677) #31	ENSMLEG00000036725 #32	ENSMLEG00000036279 #35	ENSMLEG00000038415 #36
Macaca	ANCESTRAL SPECIES	9	ENSGT00940000161157	ENSGT00940000160381	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000157293	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000154723.b.m.a	ENSGT00940000162892.a.a.b	ENSGT00940000154993.m.a.a.a #19	ENSGT00940000154993.m.b.a.b ##18	ENSGT00940000154993.m.a.a.b.b #19	ENSGT00940000160997 #20	ENSGT00530000064839 #21	ENSGT00950000183123.h.b	ENSGT00940000163287 #22	ENSGT00390000002471 #23	ENSGT00940000160293 #24	ENSGT00890000139566 #25	ENSGT00390000014107.a.b #26	ENSGT00390000008726.h.b #27	ENSGT00940000162975	ENSGT00940000155779.a.b #28	ENSGT00940000162382 #29	ENSGT00920000149187 #30	ENSGT00940000160798 #31	ENSGT00940000155565 #32	ENSGT00940000158338.i.a.b #33	ENSGT00940000155739.k	ENSGT00390000018295	ENSGT00390000006425
Pig-tailed macaque	MODERN SPECIES	259																NOTCH4 (ENSMNEG00000040340) #22	GPSM3 (ENSMNEG00000021060) #23	PBX2 (ENSMNEG00000036830) #24	AGER (ENSMNEG00000033032) #25	RNF5 (ENSMNEG00000036496) #26	AGPAT1 (ENSMNEG00000031513) #27	PPT2 (ENSMNEG00000039844) #28	PRRT1 (ENSMNEG00000042871) #29	FKBPL (ENSMNEG00000004346) #30	ATF6B (ENSMNEG00000028753) #31	ENSMNEG00000040667 #32	ENSMNEG00000019225 #33	ENSMNEG00000041718	STK19 (ENSMNEG00000040878)	DXO (ENSMNEG00000032201)	SKIC2 (ENSMNEG00000044474)
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00940000159762	ENSGT00940000162498.k	ENSGT00940000162112	ENSGT00940000153385.b.a.b.qc.b	ENSGT00860000136081	ENSGT00940000161157	ENSGT00940000160381	ENSGT00940000159897	ENSGT00940000159023	ENSGT00940000160499	ENSGT00940000162353	ENSGT00940000154993.m.a.b #18	ENSGT00940000160997 #20	ENSGT00530000064839 #21	ENSGT00950000183123.h.b	ENSGT00940000163287 #22	ENSGT00390000002471 #23	ENSGT00940000160293 #24	ENSGT00890000139566 #25	ENSGT00390000014107.a.b #26	ENSGT00390000008726.h.b #27	ENSGT00940000162975	ENSGT00940000155779.a.b #28	ENSGT00940000162382 #29	ENSGT00920000149187 #30	ENSGT00940000160798 #31	ENSGT00940000155565 #32	ENSGT00940000158338.i.a.b #33	ENSGT00940000155739.k	ENSGT00390000018295	ENSGT00390000006425
Crab-eating macaque	MODERN SPECIES	14	BRD2 (ENSMFAG00000037520)	ENSMFAG00000060572	HLA-DMA (ENSMFAG00000042109)	HLA-DMB (ENSMFAG00000004018)	PSMB9 (ENSMFAG00000038128)	TAP1 (ENSMFAG00000041369)	TAP2 (ENSMFAG00000037139)	HLA-DOB (ENSMFAG00000003652)	HLA-DQA1 (ENSMFAG00000002949)	ENSMFAG00000054107	HLA-DRB5 (ENSMFAG00000000676) #18	ENSMFAG00000058962 ##18	HLA-DRA (ENSMFAG00000032157) #20	ENSMFAG00000033140 #21	ENSMFAG00000049929	ENSMFAG00000033054 #22	RNF5 (ENSMFAG00000033282) #26	ENSMFAG00000059430	GPSM3 (ENSMFAG00000044173) #23	PBX2 (ENSMFAG00000045367) #24	AGER (ENSMFAG00000038314) #25	AGPAT1 (ENSMFAG00000042426) #27	EGFL8 (ENSMFAG00000062553)	PPT2 (ENSMFAG00000018625) #28	PRRT1 (ENSMFAG00000032011) #29	FKBPL (ENSMFAG00000006509) #30	ATF6B (ENSMFAG00000041028) #31	ENSMFAG00000002351 #32	ENSMFAG00000053747 #32	CYP21A2 (ENSMFAG00000002347) #35	ENSMFAG00000059643 #32
Rhesus	MODERN SPECIES	14	COL11A2 (ENSMMUG00000003850)	ENSMMUG00000019371	ENSMMUG00000041095	MAMU-DOA (ENSMMUG00000015734)	BRD2 (ENSMMUG00000023138)	MAMU-DMB (ENSMMUG00000022626)	ENSMMUG00000063291	PSMB9 (ENSMMUG00000011304)	PSMB8 (ENSMMUG00000011301)	MAMU-DOB (ENSMMUG00000011293)	ENSMMUG00000054826	MAMU-DRB1 (ENSMMUG00000029799) #18	MAMU-DRA (ENSMMUG00000039082) #20	TSBP1 (ENSMMUG00000018425) #21	ENSMMUG00000029402	NOTCH4 (ENSMMUG00000018461) #22	GPSM3 (ENSMMUG00000018459) #23	PBX2 (ENSMMUG00000018456) #24	AGER (ENSMMUG00000018442) #25	RNF5 (ENSMMUG00000018438) #26	AGPAT1 (ENSMMUG00000018434) #27	EGFL8 (ENSMMUG00000018432) #28	PRRT1 (ENSMMUG00000016647) #29	FKBPL (ENSMMUG00000015230) #30	ATF6B (ENSMMUG00000015229) #31	TNXB (ENSMMUG00000000758) #32	CYP21A2 (ENSMMUG00000000755) #33	ENSMMUG00000049499	ENSMMUG00000059791	STK19 (ENSMMUG00000000747)	SKIC2 (ENSMMUG00000000736)
Vervet Monkey	MODERN SPECIES	8	ENSCSAG00000009461	ENSCSAG00000009455	HLA-DOA (ENSCSAG00000009452)	BRD2 (ENSCSAG00000009445)	HLA-DMA (ENSCSAG00000009436)	HLA-DMB (ENSCSAG00000009430)	PSMB9 (ENSCSAG00000009427)	TAP1 (ENSCSAG00000009417)	PSMB8 (ENSCSAG00000009409)	HLA-DOB (ENSCSAG00000009402)	HLA-DQB1 (ENSCSAG00000009394)	HLA-DQA1 (ENSCSAG00000009389)	HLA-DRB1 (ENSCSAG00000009383) #19	ENSCSAG00000009375	HLA-DRA (ENSCSAG00000009368) #20	NOTCH4 (ENSCSAG00000009351) #22	GPSM3 (ENSCSAG00000009326) #23	PBX2 (ENSCSAG00000009322) #24	AGER (ENSCSAG00000009312) #25	RNF5 (ENSCSAG00000009301) #26	AGPAT1 (ENSCSAG00000009289) #27	PPT2 (ENSCSAG00000009272) #28	PRRT1 (ENSCSAG00000009248) #29	FKBPL (ENSCSAG00000019309) #30	ATF6B (ENSCSAG00000009237) #31	TNXB (ENSCSAG00000009220) #32	CYP21A2 (ENSCSAG00000009155) #35	ENSCSAG00000009110	STK19 (ENSCSAG00000009027)	DXO (ENSCSAG00000009007)	SKIC2 (ENSCSAG00000008988)