Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00940000172945	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Laurasiatheria	ANCESTRAL SPECIES	24	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190 #14	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190 #14	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190 #14	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Equus	ANCESTRAL SPECIES	24	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190 #14	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.j #29	ENSGT00940000162957.i #30	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Donkey	MODERN SPECIES	22	ENSEASG00005015629 #7	PNMA2 (ENSEASG00005035920) #8	EBF2 (ENSEASG00005015624) #9	CDCA2 (ENSEASG00005015623) #10	KCTD9 (ENSEASG00005015621) #11	GNRH1 (ENSEASG00005015619) #12	DOCK5 (ENSEASG00005015240) #13	ENSEASG00005032794 #14	NEFL (ENSEASG00005015035) #15	NEFM (ENSEASG00005015031) #16	ENSEASG00005018749 #17	ENSEASG00005025876 #18	ADAMDEC1 (ENSEASG00005018757) #19	ADAM28 (ENSEASG00005018766) #20	STC1 (ENSEASG00005025792) #21	NKX2-6 (ENSEASG00005018774) #22	NKX3-1 (ENSEASG00005018775) #23	SLC25A37 (ENSEASG00005026222) #24	ENTPD4 (ENSEASG00005018778) #25	LOXL2 (ENSEASG00005018781) #26	R3HCC1 (ENSEASG00005018782) #27	CHMP7 (ENSEASG00005018783) #28	ENSEASG00005036200 #29	ENSEASG00005036097 #30	RHOBTB2 (ENSEASG00005018788) #31	PEBP4 (ENSEASG00005018790) #32	EGR3 (ENSEASG00005029305) #33	BIN3 (ENSEASG00005018792) #34	CCAR2 (ENSEASG00005018793) #35	C8orf58 (ENSEASG00005018796) #36	PDLIM2 (ENSEASG00005018800) #37
Horse	MODERN SPECIES	11	EBF2 (ENSECAG00000014179) #9	ENSECAG00000051786	ENSECAG00000032941	ENSECAG00000048777	CDCA2 (ENSECAG00000013188) #10	KCTD9 (ENSECAG00000011535) #11	GNRH1 (ENSECAG00000010664) #12	DOCK5 (ENSECAG00000023607) #13	NEFL (ENSECAG00000022890) #15	NEFM (ENSECAG00000022370) #16	ADAM7 (ENSECAG00000020537) #17	ADAMDEC1 (ENSECAG00000019922) #19	ADAM28 (ENSECAG00000014577) #20	ENSECAG00000053236	STC1 (ENSECAG00000013731) #21	NKX2-6 (ENSECAG00000028673) #22	NKX3-1 (ENSECAG00000001509) #23	SLC25A37 (ENSECAG00000013319) #24	ENTPD4 (ENSECAG00000010493) #25	LOXL2 (ENSECAG00000025038) #26	R3HCC1 (ENSECAG00000025013) #27	CHMP7 (ENSECAG00000024657) #28	ENSECAG00000036031 #29	ENSECAG00000024512 #30	RHOBTB2 (ENSECAG00000024136) #31	PEBP4 (ENSECAG00000023802) #32	EGR3 (ENSECAG00000023741) #33	BIN3 (ENSECAG00000022315) #34	CCAR2 (ENSECAG00000020651) #35	C2H8orf58 (ENSECAG00000020618) #36	PDLIM2 (ENSECAG00000019910) #37
Chiroptera	ANCESTRAL SPECIES	64	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Megabat	MODERN SPECIES	1233																NKX2-6 (ENSPVAG00000005380) #22	NKX3-1 (ENSPVAG00000005378) #23	ENSPVAG00000005377	SLC25A37 (ENSPVAG00000005376) #24
Microchiroptera	ANCESTRAL SPECIES	57	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Greater horseshoe bat	MODERN SPECIES	9	BNIP3L (ENSRFEG00010006372)	PPP2R2A (ENSRFEG00010006444) #7	EBF2 (ENSRFEG00010006593) #9	CDCA2 (ENSRFEG00010006703) #10	KCTD9 (ENSRFEG00010006936) #11	GNRH1 (ENSRFEG00010006984) #12	DOCK5 (ENSRFEG00010007027) #13	NEFL (ENSRFEG00010007163) #15	ENSRFEG00010007201	ADAM7 (ENSRFEG00010007316) #17	ADAMDEC1 (ENSRFEG00010007930) #19	ADAM28 (ENSRFEG00010007990) #20	STC1 (ENSRFEG00010008368) #21	ENSRFEG00010008447	ENSRFEG00010008464	NKX2-6 (ENSRFEG00010008490) #22	NKX3-1 (ENSRFEG00010008525) #23	SLC25A37 (ENSRFEG00010008583) #24	ENTPD4 (ENSRFEG00010008625) #25	LOXL2 (ENSRFEG00010008683) #26	R3HCC1 (ENSRFEG00010008730) #27	CHMP7 (ENSRFEG00010008763) #28	ENSRFEG00010008806 #29	ENSRFEG00010008858	RHOBTB2 (ENSRFEG00010008927) #31	PEBP4 (ENSRFEG00010009078) #32	EGR3 (ENSRFEG00010009121) #33	BIN3 (ENSRFEG00010009192) #34	CCAR2 (ENSRFEG00010009297) #35	C8orf58 (ENSRFEG00010009386) #36	ENSRFEG00010009418 #37
Carnivora	ANCESTRAL SPECIES	5	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.q.a	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558	ENSGT00940000154115.c.a
Caniformia	ANCESTRAL SPECIES	7	ENSGT00390000013415.a.b.q.b	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.q.a	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558	ENSGT00940000154115.c.a
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00390000013415.a.b.q.b	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.q.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558	ENSGT00940000154115.c.a
Ursidae	ANCESTRAL SPECIES	50	ENSGT00390000013415.a.b.q.b	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.q.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558	ENSGT00940000154115.c.a
Giant Panda	MODERN SPECIES	15	DPYSL2 (ENSAMEG00000000223)	PNMA2 (ENSAMEG00000023900) #8	BNIP3L (ENSAMEG00000000287)	PPP2R2A (ENSAMEG00000000302) #7	EBF2 (ENSAMEG00000000326) #9	CDCA2 (ENSAMEG00000000346) #10	KCTD9 (ENSAMEG00000000365) #11	GNRH1 (ENSAMEG00000000386) #12	DOCK5 (ENSAMEG00000000393) #13	NEFL (ENSAMEG00000000584) #15	ENSAMEG00000000596	ADAM7 (ENSAMEG00000001607) #17	ADAMDEC1 (ENSAMEG00000001578) #19	ADAM28 (ENSAMEG00000001508) #20	STC1 (ENSAMEG00000024356) #21	NKX2-6 (ENSAMEG00000002863) #22	NKX3-1 (ENSAMEG00000026096) #23	SLC25A37 (ENSAMEG00000002868) #24	ENTPD4 (ENSAMEG00000002873) #25	LOXL2 (ENSAMEG00000002911) #26	R3HCC1 (ENSAMEG00000002963) #27	CHMP7 (ENSAMEG00000002969) #28	RHOBTB2 (ENSAMEG00000002993) #31	PEBP4 (ENSAMEG00000003010) #32	EGR3 (ENSAMEG00000003013) #33	BIN3 (ENSAMEG00000003027) #34	CCAR2 (ENSAMEG00000003044) #35	C8orf58 (ENSAMEG00000003077) #36	PDLIM2 (ENSAMEG00000003082) #37	PPP3CC (ENSAMEG00000003134)	SLC39A14 (ENSAMEG00000003151)
Ursus	ANCESTRAL SPECIES																	ENSGT00940000162737 #22
American black bear	MODERN SPECIES	2982																NKX2-6 (ENSUAMG00000011320) #22
Mustelinae	ANCESTRAL SPECIES	104				ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558	ENSGT00940000154115.c.a
American mink	MODERN SPECIES	232															STC1 (ENSNVIG00000023570) #21	NKX2-6 (ENSNVIG00000023566) #22	NKX3-1 (ENSNVIG00000023562) #23	SLC25A37 (ENSNVIG00000023560) #24	ENSNVIG00000023559	ENTPD4 (ENSNVIG00000023555) #25	LOXL2 (ENSNVIG00000023548) #26	R3HCC1 (ENSNVIG00000023544) #27	CHMP7 (ENSNVIG00000023539) #28	RHOBTB2 (ENSNVIG00000023533) #31	PEBP4 (ENSNVIG00000023531) #32	EGR3 (ENSNVIG00000023524) #33	BIN3 (ENSNVIG00000023519) #34	CCAR2 (ENSNVIG00000023506) #35	C8orf58 (ENSNVIG00000023502) #36	PDLIM2 (ENSNVIG00000023477) #37	VINEX (ENSNVIG00000023464)
Ferret	MODERN SPECIES	256	ENSMPUG00000003181	PPP2R2A (ENSMPUG00000003186) #7	EBF2 (ENSMPUG00000003195) #9	ENSMPUG00000003203	CDCA2 (ENSMPUG00000003208) #10	KCTD9 (ENSMPUG00000003214) #11	GNRH1 (ENSMPUG00000003219) #12	DOCK5 (ENSMPUG00000003228) #13	NEFL (ENSMPUG00000003244) #15	ENSMPUG00000003249	ADAM7 (ENSMPUG00000003252) #17	ENSMPUG00000018762	ADAMDEC1 (ENSMPUG00000003330) #19	ADAM28 (ENSMPUG00000003381) #20	STC1 (ENSMPUG00000003399) #21	NKX2-6 (ENSMPUG00000003409) #22	NKX3-1 (ENSMPUG00000003418) #23	SLC25A37 (ENSMPUG00000003422) #24	ENTPD4 (ENSMPUG00000003442) #25	LOXL2 (ENSMPUG00000003449) #26	R3HCC1 (ENSMPUG00000003457) #27	ENSMPUG00000003465	CHMP7 (ENSMPUG00000003471) #28	RHOBTB2 (ENSMPUG00000003474) #31	PEBP4 (ENSMPUG00000003480) #32	EGR3 (ENSMPUG00000003485) #33	CCAR2 (ENSMPUG00000003486) #35	BIN3 (ENSMPUG00000003498) #34	C8orf58 (ENSMPUG00000003516) #36	PDLIM2 (ENSMPUG00000003539) #37	SORBS3 (ENSMPUG00000003610)
Canidae	ANCESTRAL SPECIES	31	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.q.a	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734.h #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558	ENSGT00940000154115.c.a
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.q.a	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734.h #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558	ENSGT00940000154115.c.a
Dog	MODERN SPECIES	17	PPP2R2A (ENSCAFG00845013440)	PPP2R2A (ENSCAFG00845013645) #7	EBF2 (ENSCAFG00845013887) #9	ENSCAFG00845013986	ENSCAFG00845014017	CDCA2 (ENSCAFG00845014066) #10	KCTD9 (ENSCAFG00845014154) #11	GNRH1 (ENSCAFG00845014221) #12	DOCK5 (ENSCAFG00845014289) #13	NEFL (ENSCAFG00845014438) #15	NEFM (ENSCAFG00845014497)	ADAM7 (ENSCAFG00845014694) #17	ADAMDEC1 (ENSCAFG00845014873) #19	ADAM28 (ENSCAFG00845015078) #20	STC1 (ENSCAFG00845015608) #21	NKX2-6 (ENSCAFG00845015839) #22	NKX3-1 (ENSCAFG00845015954) #23	SLC25A37 (ENSCAFG00845016130) #24	ENTPD4 (ENSCAFG00845016515) #25	LOXL2 (ENSCAFG00845017019) #26	R3HCC1 (ENSCAFG00845017316) #27	CHMP7 (ENSCAFG00845017718) #28	RHOBTB2 (ENSCAFG00845018128) #31	PEBP4 (ENSCAFG00845018869) #32	EGR3 (ENSCAFG00845019362) #33	BIN3 (ENSCAFG00845019490) #34	CCAR2 (ENSCAFG00845019929) #35	C8orf58 (ENSCAFG00845020195) #36	PDLIM2 (ENSCAFG00845020425) #37	SORBS3 (ENSCAFG00845020887)	PPP3CC (ENSCAFG00845022916)
Dingo	MODERN SPECIES	304	DPYSL2 (ENSCAFG00020012592)	ENSCAFG00020012600	PNMA2 (ENSCAFG00020012608) #8	ENSCAFG00020012611	PPP2R2A (ENSCAFG00020012619) #7	EBF2 (ENSCAFG00020012629) #9	CDCA2 (ENSCAFG00020012668) #10	KCTD9 (ENSCAFG00020012683) #11	GNRH1 (ENSCAFG00020012686) #12	DOCK5 (ENSCAFG00020012698) #13	NEFM (ENSCAFG00020012742) #16	NEFL (ENSCAFG00020012757) #15	ADAM7 (ENSCAFG00020012781) #17	ADAM28 (ENSCAFG00020012819) #20	STC1 (ENSCAFG00020012841) #21	ENSCAFG00020012845 #22	NKX3-1 (ENSCAFG00020012847) #23	SLC25A37 (ENSCAFG00020012855) #24	ENSCAFG00020012856 #25	LOXL2 (ENSCAFG00020012866) #26	R3HCC1 (ENSCAFG00020012870) #27	CHMP7 (ENSCAFG00020012876) #28	RHOBTB2 (ENSCAFG00020012882) #31	PEBP4 (ENSCAFG00020012890) #32	EGR3 (ENSCAFG00020012893) #33	BIN3 (ENSCAFG00020012894) #34	ENSCAFG00020012898 #35	ENSCAFG00020012923 #35	C8orf58 (ENSCAFG00020012932) #36	PDLIM2 (ENSCAFG00020012938) #37	SORBS3 (ENSCAFG00020012942)
Red fox	MODERN SPECIES	67	PPP2R2A (ENSVVUG00000003745) #7	EBF2 (ENSVVUG00000003772) #9	ENSVVUG00000004033 #10	ENSVVUG00000004038	KCTD9 (ENSVVUG00000004063) #11	GNRH1 (ENSVVUG00000004172) #12	ENSVVUG00000004182 #13	ENSVVUG00000004272 #13	ENSVVUG00000004850	NEFL (ENSVVUG00000004852) #15	NEFM (ENSVVUG00000004862) #16	ADAM7 (ENSVVUG00000004873) #17	ADAMDEC1 (ENSVVUG00000004882) #19	ADAM28 (ENSVVUG00000004891) #20	STC1 (ENSVVUG00000004921) #21	NKX2-6 (ENSVVUG00000004929) #22	ENSVVUG00000004932 #23	SLC25A37 (ENSVVUG00000004950) #24	ENTPD4 (ENSVVUG00000004962) #25	LOXL2 (ENSVVUG00000004974) #26	R3HCC1 (ENSVVUG00000005056) #27	CHMP7 (ENSVVUG00000005081) #28	RHOBTB2 (ENSVVUG00000005099) #31	PEBP4 (ENSVVUG00000005125) #32	EGR3 (ENSVVUG00000005144) #33	BIN3 (ENSVVUG00000005147) #34	CCAR2 (ENSVVUG00000005152) #35	CUNH8orf58 (ENSVVUG00000005160) #36	PDLIM2 (ENSVVUG00000005161) #37	SORBS3 (ENSVVUG00000005170)	PPP3CC (ENSVVUG00000005197)
Felidae	ANCESTRAL SPECIES	4	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.q.a	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558	ENSGT00940000154115.c.a
Panthera	ANCESTRAL SPECIES	5	ENSGT00390000013415.a.b.q.a	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406.b #17	ENSGT00940000161406.a #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558	ENSGT00940000154115.c.a
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00390000013415.a.b.q.a	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406.b #17	ENSGT00940000161685.A.a	ENSGT00940000161406.a #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558	ENSGT00940000154115.c.a
lion	MODERN SPECIES	4	DPYSL2 (ENSPLOG00000002681)	PNMA2 (ENSPLOG00000002750) #8	BNIP3L (ENSPLOG00000002778)	PPP2R2A (ENSPLOG00000002836) #7	EBF2 (ENSPLOG00000002904) #9	CDCA2 (ENSPLOG00000002958) #10	KCTD9 (ENSPLOG00000003006) #11	GNRH1 (ENSPLOG00000003031) #12	DOCK5 (ENSPLOG00000003063) #13	ENSPLOG00000003197	NEFL (ENSPLOG00000003220) #15	ADAM7 (ENSPLOG00000003308) #17	ADAMDEC1 (ENSPLOG00000003417) #19	ADAM28 (ENSPLOG00000003535) #20	STC1 (ENSPLOG00000003716) #21	NKX2-6 (ENSPLOG00000003735) #22	NKX3-1 (ENSPLOG00000003755) #23	SLC25A37 (ENSPLOG00000003786) #24	ENTPD4 (ENSPLOG00000003831) #25	LOXL2 (ENSPLOG00000003867) #26	R3HCC1 (ENSPLOG00000003894) #27	CHMP7 (ENSPLOG00000003917) #28	RHOBTB2 (ENSPLOG00000003941) #31	PEBP4 (ENSPLOG00000003959) #32	EGR3 (ENSPLOG00000003981) #33	BIN3 (ENSPLOG00000004006) #34	CCAR2 (ENSPLOG00000004036) #35	C8orf58 (ENSPLOG00000004106) #36	PDLIM2 (ENSPLOG00000004126) #37	SORBS3 (ENSPLOG00000004161)	PPP3CC (ENSPLOG00000004219)
leopard	MODERN SPECIES	49	ENSPPRG00000023377	PPP2R2A (ENSPPRG00000023725) #7	EBF2 (ENSPPRG00000024264) #9	CDCA2 (ENSPPRG00000017681) #10	KCTD9 (ENSPPRG00000013953) #11	GNRH1 (ENSPPRG00000013600) #12	DOCK5 (ENSPPRG00000013437) #13	ENSPPRG00000011381 #15	NEFL (ENSPPRG00000010879) #15	NEFM (ENSPPRG00000009800) #16	ENSPPRG00000008890 #17	ENSPPRG00000007410 #17	ADAMDEC1 (ENSPPRG00000006694) #19	ADAM28 (ENSPPRG00000005754) #20	STC1 (ENSPPRG00000004675) #21	NKX2-6 (ENSPPRG00000004345) #22	NKX3-1 (ENSPPRG00000004152) #23	SLC25A37 (ENSPPRG00000003800) #24	ENTPD4 (ENSPPRG00000003654) #25	LOXL2 (ENSPPRG00000003080) #26	R3HCC1 (ENSPPRG00000002522) #27	CHMP7 (ENSPPRG00000001462) #28	RHOBTB2 (ENSPPRG00000000275) #31	PEBP4 (ENSPPRG00000017284) #32	EGR3 (ENSPPRG00000015837) #33	BIN3 (ENSPPRG00000014405) #34	CCAR2 (ENSPPRG00000013075) #35	C8orf58 (ENSPPRG00000012102) #36	PDLIM2 (ENSPPRG00000009469) #37	SORBS3 (ENSPPRG00000006181)	PPP3CC (ENSPPRG00000003854)
Cat	MODERN SPECIES	235	PNMA2 (ENSFCAG00000032107) #8	BNIP3L (ENSFCAG00000030159)	PPP2R2A (ENSFCAG00000029721) #7	EBF2 (ENSFCAG00000003607) #9	ENSFCAG00000023720	CDCA2 (ENSFCAG00000011887) #10	KCTD9 (ENSFCAG00000011885) #11	GNRH1 (ENSFCAG00000029305) #12	DOCK5 (ENSFCAG00000011883) #13	NEFL (ENSFCAG00000013441) #15	NEFM (ENSFCAG00000029288) #16	ADAM7 (ENSFCAG00000013087) #17	ADAMDEC1 (ENSFCAG00000003531) #19	ADAM28 (ENSFCAG00000008957) #20	STC1 (ENSFCAG00000026611) #21	NKX2-6 (ENSFCAG00000038582) #22	NKX3-1 (ENSFCAG00000039688) #23	SLC25A37 (ENSFCAG00000005418) #24	ENTPD4 (ENSFCAG00000005417) #25	LOXL2 (ENSFCAG00000012400) #26	R3HCC1 (ENSFCAG00000012395) #27	CHMP7 (ENSFCAG00000031450) #28	RHOBTB2 (ENSFCAG00000005670) #31	PEBP4 (ENSFCAG00000029653) #32	EGR3 (ENSFCAG00000005668) #33	BIN3 (ENSFCAG00000005667) #34	CCAR2 (ENSFCAG00000005666) #35	CB1H8orf58 (ENSFCAG00000024843) #36	PDLIM2 (ENSFCAG00000005664) #37	SORBS3 (ENSFCAG00000005663)	PPP3CC (ENSFCAG00000030895)
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190 #14	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Suina	ANCESTRAL SPECIES	42	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Chacoan peccary	MODERN SPECIES	813	DPYSL2 (ENSCWAG00000012142)	PNMA2 (ENSCWAG00000012323) #8	BNIP3L (ENSCWAG00000012345)	PPP2R2A (ENSCWAG00000012404) #7	EBF2 (ENSCWAG00000012599) #9	CDCA2 (ENSCWAG00000012969) #10	KCTD9 (ENSCWAG00000013249) #11	GNRH1 (ENSCWAG00000013307) #12	DOCK5 (ENSCWAG00000013368) #13	NEFL (ENSCWAG00000013873) #15	ENSCWAG00000013920	ADAM7 (ENSCWAG00000013998) #17	ADAMDEC1 (ENSCWAG00000014486) #19	ADAM28 (ENSCWAG00000014725) #20	STC1 (ENSCWAG00000014909) #21	NKX2-6 (ENSCWAG00000014986) #22	NKX3-1 (ENSCWAG00000015012) #23	SLC25A37 (ENSCWAG00000015044) #24	ENTPD4 (ENSCWAG00000015072) #25	LOXL2 (ENSCWAG00000015127) #26	R3HCC1 (ENSCWAG00000015202) #27	CHMP7 (ENSCWAG00000015296) #28	RHOBTB2 (ENSCWAG00000015338) #31	PEBP4 (ENSCWAG00000015546) #32	EGR3 (ENSCWAG00000015603) #33	BIN3 (ENSCWAG00000015644) #34	CCAR2 (ENSCWAG00000015750) #35	C8orf58 (ENSCWAG00000015807) #36	PDLIM2 (ENSCWAG00000015849) #37	SORBS3 (ENSCWAG00000015893)	PPP3CC (ENSCWAG00000016041)
Pig	MODERN SPECIES	5	PPP2R2A (ENSSSCG00000009657) #7	EBF2 (ENSSSCG00000009655) #9	ENSSSCG00000042774	CDCA2 (ENSSSCG00000009653) #10	KCTD9 (ENSSSCG00000009652) #11	GNRH1 (ENSSSCG00000009651) #12	DOCK5 (ENSSSCG00000009650) #13	NEFL (ENSSSCG00000009649) #15	ENSSSCG00000009648	ENSSSCG00000060373	ENSSSCG00000057307	ADAM7 (ENSSSCG00000009646) #17	ADAMDEC1 (ENSSSCG00000009645) #19	ADAM28 (ENSSSCG00000009644) #20	STC1 (ENSSSCG00000009642) #21	NKX2-6 (ENSSSCG00000028064) #22	NKX3-1 (ENSSSCG00000031924) #23	ENSSSCG00000033037 #24	ENTPD4 (ENSSSCG00000031871) #25	LOXL2 (ENSSSCG00000033608) #26	ENSSSCG00000039915 #27	CHMP7 (ENSSSCG00000033113) #28	ENSSSCG00000058071 #29	ENSSSCG00000009633 #29	RHOBTB2 (ENSSSCG00000009638) #31	PEBP4 (ENSSSCG00000009631) #32	EGR3 (ENSSSCG00000009630) #33	ENSSSCG00000061246	BIN3 (ENSSSCG00000009629) #34	CCAR2 (ENSSSCG00000009628) #35	C8orf58 (ENSSSCG00000009627) #36
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190 #14	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.e.a #29	ENSGT00940000162957.f #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190 #14	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.e.a #29	ENSGT00940000162957.f #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Cetacea	ANCESTRAL SPECIES	9	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.e.a #29	ENSGT00940000162957.f #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Odontoceti	ANCESTRAL SPECIES	8	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.e.a #29	ENSGT00940000162957.e.b #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Odontoceti_a	ANCESTRAL SPECIES	15	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.e.a #29	ENSGT00940000162957.e.b #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000183010.a.b.a.a.a.a.a.b.b.d	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.e.a #29	ENSGT00940000162957.e.b #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Monodontidae	ANCESTRAL SPECIES	5	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000183010.a.b.a.a.a.a.a.b.b.d	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01010000228881	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.e.a #29	ENSGT00940000162957.e.b #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36
Narwhal	MODERN SPECIES	312	PNMA2 (ENSMMNG00015018639) #8	BNIP3L (ENSMMNG00015018649)	PPP2R2A (ENSMMNG00015018714) #7	ENSMMNG00015018827	EBF2 (ENSMMNG00015018863) #9	CDCA2 (ENSMMNG00015018900) #10	KCTD9 (ENSMMNG00015019003) #11	GNRH1 (ENSMMNG00015019060) #12	DOCK5 (ENSMMNG00015019103) #13	NEFL (ENSMMNG00015019153) #15	ENSMMNG00015019196	ENSMMNG00015019249 #17	ADAMDEC1 (ENSMMNG00015019319) #19	ADAM28 (ENSMMNG00015019400) #20	STC1 (ENSMMNG00015019502) #21	NKX2-6 (ENSMMNG00015019533) #22	ENSMMNG00015019551	SLC25A37 (ENSMMNG00015019590) #24	ENSMMNG00015019603	ENSMMNG00015019619	ENTPD4 (ENSMMNG00015019645) #25	LOXL2 (ENSMMNG00015019701) #26	R3HCC1 (ENSMMNG00015019763) #27	CHMP7 (ENSMMNG00015019808) #28	ENSMMNG00015019848 #29	ENSMMNG00015019894 #29	RHOBTB2 (ENSMMNG00015019941) #31	PEBP4 (ENSMMNG00015019998) #32	EGR3 (ENSMMNG00015020027) #33	BIN3 (ENSMMNG00015020068) #34	CCAR2 (ENSMMNG00015020121) #35
Beluga whale	MODERN SPECIES	4	PNMA2 (ENSDLEG00000001239) #8	BNIP3L (ENSDLEG00000001250)	PPP2R2A (ENSDLEG00000001272) #7	ENSDLEG00000001289	EBF2 (ENSDLEG00000001316) #9	ENSDLEG00000001380	CDCA2 (ENSDLEG00000001385) #10	KCTD9 (ENSDLEG00000001415) #11	GNRH1 (ENSDLEG00000001435) #12	DOCK5 (ENSDLEG00000002343) #13	ENSDLEG00000006462	NEFL (ENSDLEG00000006467) #15	NEFM (ENSDLEG00000006476) #16	ADAM28 (ENSDLEG00000006489) #20	STC1 (ENSDLEG00000006517) #21	ENSDLEG00000006522 #22	NKX3-1 (ENSDLEG00000006531) #23	SLC25A37 (ENSDLEG00000006540) #24	ENSDLEG00000006543	ENTPD4 (ENSDLEG00000006555) #25	LOXL2 (ENSDLEG00000006576) #26	R3HCC1 (ENSDLEG00000006591) #27	CHMP7 (ENSDLEG00000006605) #28	ENSDLEG00000006614 #29	ENSDLEG00000006626 #29	ZNF484 (ENSDLEG00000006635)	ENSDLEG00000006641	IARS (ENSDLEG00000006757)	NOL8 (ENSDLEG00000007445)	CENPP (ENSDLEG00000007526)	OGN (ENSDLEG00000007549)
Vaquita	MODERN SPECIES	17	PPP2R2A (ENSPSNG00000010594) #7	ENSPSNG00000010536	EBF2 (ENSPSNG00000010256) #9	ENSPSNG00000010228	ENSPSNG00000010183	CDCA2 (ENSPSNG00000009875) #10	KCTD9 (ENSPSNG00000009803) #11	GNRH1 (ENSPSNG00000004028) #12	ENSPSNG00000003996	ENSPSNG00000003965	NEFL (ENSPSNG00000003946) #15	ENSPSNG00000003914	ADAMDEC1 (ENSPSNG00000003873) #19	ADAM28 (ENSPSNG00000003790) #20	STC1 (ENSPSNG00000003726) #21	NKX2-6 (ENSPSNG00000003713) #22	NKX3-1 (ENSPSNG00000003693) #23	ENSPSNG00000003682	SLC25A37 (ENSPSNG00000003670) #24	ENTPD4 (ENSPSNG00000003639) #25	LOXL2 (ENSPSNG00000003593) #26	R3HCC1 (ENSPSNG00000003548) #27	CHMP7 (ENSPSNG00000003508) #28	ENSPSNG00000003483 #29	ENSPSNG00000003447 #29	ENSPSNG00000003423	RHOBTB2 (ENSPSNG00000003361) #31	PEBP4 (ENSPSNG00000003231) #32	EGR3 (ENSPSNG00000003185) #33	BIN3 (ENSPSNG00000003145) #34	CCAR2 (ENSPSNG00000003064) #35
Dolphin	MODERN SPECIES	4932																NKX2-6 (ENSTTRG00000012331) #22	ENSTTRG00000012332 #23
Sperm whale	MODERN SPECIES	20	BNIP3L (ENSPCTG00005001600)	PPP2R2A (ENSPCTG00005001540) #7	EBF2 (ENSPCTG00005001486) #9	ENSPCTG00005001468	CDCA2 (ENSPCTG00005001413) #10	KCTD9 (ENSPCTG00005001337) #11	GNRH1 (ENSPCTG00005001298) #12	DOCK5 (ENSPCTG00005001083) #13	NEFL (ENSPCTG00005001011) #15	NEFM (ENSPCTG00005000983) #16	ENSPCTG00005000957	ADAM7 (ENSPCTG00005000905) #17	ADAMDEC1 (ENSPCTG00005000843) #19	ADAM28 (ENSPCTG00005000741) #20	STC1 (ENSPCTG00005000557) #21	NKX2-6 (ENSPCTG00005000444) #22	NKX3-1 (ENSPCTG00005015538) #23	ENSPCTG00005015478	SLC25A37 (ENSPCTG00005015433) #24	ENSPCTG00005015370	ENSPCTG00005015319	ENTPD4 (ENSPCTG00005015209) #25	LOXL2 (ENSPCTG00005015101) #26	BIN3 (ENSPCTG00005014854) #34	CCAR2 (ENSPCTG00005014790) #35	ENSPCTG00005014687 #31	ENSPCTG00005014672 #29	PPP3CC (ENSPCTG00005014485)	SLC39A14 (ENSPCTG00005014396)	PIWIL2 (ENSPCTG00005013801)	POLR3D (ENSPCTG00005013730)
Blue whale	MODERN SPECIES	17	PNMA2 (ENSBMSG00010001359) #8	ENSBMSG00010001374	PPP2R2A (ENSBMSG00010001403) #7	EBF2 (ENSBMSG00010001470) #9	CDCA2 (ENSBMSG00010001504) #10	KCTD9 (ENSBMSG00010001525) #11	GNRH1 (ENSBMSG00010001589) #12	DOCK5 (ENSBMSG00010001626) #13	NEFL (ENSBMSG00010001677) #15	NEFM (ENSBMSG00010001692) #16	ENSBMSG00010001706	ENSBMSG00010001750 #17	ADAMDEC1 (ENSBMSG00010001768) #19	ENSBMSG00010001817 #20	STC1 (ENSBMSG00010001852) #21	NKX2-6 (ENSBMSG00010001859) #22	NKX3-1 (ENSBMSG00010001867) #23	SLC25A37 (ENSBMSG00010001881) #24	ENSBMSG00010001888	ENSBMSG00010001897	ENTPD4 (ENSBMSG00010001918) #25	LOXL2 (ENSBMSG00010001934) #26	ENSBMSG00010001963 #27	CHMP7 (ENSBMSG00010001987) #28	ENSBMSG00010002015 #29	RHOBTB2 (ENSBMSG00010002063) #31	PEBP4 (ENSBMSG00010002119) #32	EGR3 (ENSBMSG00010002174) #33	BIN3 (ENSBMSG00010002206) #34	CCAR2 (ENSBMSG00010002236) #35	C8orf58 (ENSBMSG00010002259) #36
Pecora	ANCESTRAL SPECIES	36	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190 #14	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00940000154172.`b	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918.j #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558	ENSGT00940000154115.c.a
Yarkand deer	MODERN SPECIES	7	DPYSL2 (ENSCHYG00000026867)	ENSCHYG00000026854	ENSCHYG00000026841 #7	EBF2 (ENSCHYG00000026813) #9	CDCA2 (ENSCHYG00000026788) #10	KCTD9 (ENSCHYG00000026770) #11	GNRH1 (ENSCHYG00000026755) #12	DOCK5 (ENSCHYG00000026683) #13	NEFL (ENSCHYG00000026647) #15	NEFM (ENSCHYG00000026636) #16	ADAM7 (ENSCHYG00000026508) #17	ADAMDEC1 (ENSCHYG00000026439) #19	ADAM28 (ENSCHYG00000025837) #20	ENSCHYG00000025762	STC1 (ENSCHYG00000025743) #21	NKX2-6 (ENSCHYG00000025734) #22	NKX3-1 (ENSCHYG00000025709) #23	SLC25A37 (ENSCHYG00000025677) #24	ENTPD4 (ENSCHYG00000025626) #25	LOXL2 (ENSCHYG00000025533) #26	R3HCC1 (ENSCHYG00000025446) #27	CHMP7 (ENSCHYG00000025352) #28	ENSCHYG00000025211	RHOBTB2 (ENSCHYG00000025115) #31	PEBP4 (ENSCHYG00000025076) #32	EGR3 (ENSCHYG00000025046) #33	BIN3 (ENSCHYG00000024970) #34	CCAR2 (ENSCHYG00000024837) #35	C8orf58 (ENSCHYG00000024797) #36	PDLIM2 (ENSCHYG00000024701) #37	SORBS3 (ENSCHYG00000024528)
Percora_a	ANCESTRAL SPECIES	24	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190 #14	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00940000154172.`b	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162635.mb.b	ENSGT00940000158918.j #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Siberian musk deer	MODERN SPECIES	327	BNIP3L (ENSMMSG00000006092)	ENSMMSG00000005972 #7	EBF2 (ENSMMSG00000005908) #9	CDCA2 (ENSMMSG00000005842) #10	KCTD9 (ENSMMSG00000005761) #11	GNRH1 (ENSMMSG00000005726) #12	DOCK5 (ENSMMSG00000005425) #13	NEFL (ENSMMSG00000005342) #15	NEFM (ENSMMSG00000005289) #16	ADAM7 (ENSMMSG00000004688) #17	ADAMDEC1 (ENSMMSG00000004507) #19	ADAM28 (ENSMMSG00000004400) #20	ENSMMSG00000004334	ENSMMSG00000004320	STC1 (ENSMMSG00000013160) #21	NKX2-6 (ENSMMSG00000013148) #22	NKX3-1 (ENSMMSG00000013132) #23	SLC25A37 (ENSMMSG00000013114) #24	ENTPD4 (ENSMMSG00000013068) #25	LOXL2 (ENSMMSG00000013026) #26	R3HCC1 (ENSMMSG00000012970) #27	CHMP7 (ENSMMSG00000012943) #28	ENSMMSG00000012887	RHOBTB2 (ENSMMSG00000012820) #31	PEBP4 (ENSMMSG00000012800) #32	EGR3 (ENSMMSG00000012782) #33	BIN3 (ENSMMSG00000012720) #34	CCAR2 (ENSMMSG00000012636) #35	C8orf58 (ENSMMSG00000012599) #36	PDLIM2 (ENSMMSG00000012537) #37	SORBS3 (ENSMMSG00000012318)
Bovidae	ANCESTRAL SPECIES	14	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190 #14	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00940000154172.`b	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162635.mb.b	ENSGT00940000158918.j #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Caprinae	ANCESTRAL SPECIES	14	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860.n #28	ENSGT00940000162635.mb.b	ENSGT00940000158918.j #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Rambouillet Sheep	MODERN SPECIES	11	ADRA1A (ENSOARG00020013199)	ENSOARG00020013277	DPYSL2 (ENSOARG00020013413)	PNMA2 (ENSOARG00020013810) #8	ENSOARG00020013834	PPP2R2A (ENSOARG00020013913) #7	EBF2 (ENSOARG00020014139) #9	CDCA2 (ENSOARG00020014388) #10	KCTD9 (ENSOARG00020014450) #11	DOCK5 (ENSOARG00020014672) #13	GNRH1 (ENSOARG00020017575) #12	NEFL (ENSOARG00020017673) #15	NEFM (ENSOARG00020017740) #16	ADAM7 (ENSOARG00020017810) #17	STC1 (ENSOARG00020019387) #21	NKX2-6 (ENSOARG00020019459) #22	NKX3-1 (ENSOARG00020019488) #23	SLC25A37 (ENSOARG00020019551) #24	ENTPD4 (ENSOARG00020019615) #25	ENSOARG00020019697 #28	ENSOARG00020019730	RHOBTB2 (ENSOARG00020019759) #31	PEBP4 (ENSOARG00020019900) #32	EGR3 (ENSOARG00020019990) #33	BIN3 (ENSOARG00020020084) #34	CCAR2 (ENSOARG00020020234) #35	C8orf58 (ENSOARG00020020420) #36	PDLIM2 (ENSOARG00020020511) #37	SORBS3 (ENSOARG00020020583)	PPP3CC (ENSOARG00020020737)	ENSOARG00020020965
Goat	MODERN SPECIES	27	PNMA2 (ENSCHIG00000002000) #8	ENSCHIG00000024818	PPP2R2A (ENSCHIG00000007473) #7	EBF2 (ENSCHIG00000023729) #9	CDCA2 (ENSCHIG00000018580) #10	KCTD9 (ENSCHIG00000015791) #11	GNRH1 (ENSCHIG00000016406) #12	DOCK5 (ENSCHIG00000001085) #13	NEFL (ENSCHIG00000011951) #15	NEFM (ENSCHIG00000019945) #16	ADAM7 (ENSCHIG00000015652) #17	ADAMDEC1 (ENSCHIG00000015701) #19	ADAM28 (ENSCHIG00000024308) #20	ENSCHIG00000012581	STC1 (ENSCHIG00000010708) #21	NKX2-6 (ENSCHIG00000023290) #22	NKX3-1 (ENSCHIG00000010463) #23	ENSCHIG00000009620	ENSCHIG00000010457	SLC25A37 (ENSCHIG00000009638) #24	ENTPD4 (ENSCHIG00000017608) #25	LOXL2 (ENSCHIG00000015358) #26	R3HCC1 (ENSCHIG00000009107) #27	ENSCHIG00000024704 #28	ENSCHIG00000021504	ENSCHIG00000026442 #29	ENSCHIG00000015870	RHOBTB2 (ENSCHIG00000010021) #31	PEBP4 (ENSCHIG00000018763) #32	EGR3 (ENSCHIG00000022674) #33	BIN3 (ENSCHIG00000020329) #34
Bovinae	ANCESTRAL SPECIES	14	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190 #14	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00940000154172.`b	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162635.mb.b	ENSGT00940000158918.j #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Bos	ANCESTRAL SPECIES	10	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190 #14	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00940000154172.`b	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162635.mb.b.a	ENSGT00940000158918.i.b #31	ENSGT00940000158918.j #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Bos_a	ANCESTRAL SPECIES	20	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00990000214190 #14	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00940000154172.`b	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162635.mb.b.a	ENSGT00940000158918.i.b #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT01100000263480.a.a.b.b.b.a.b.b.b.a.b.a.b.a.b
Domestic yak	MODERN SPECIES	26	ENSBGRG00000000444	PPP2R2A (ENSBGRG00000000395) #7	EBF2 (ENSBGRG00000017109) #9	CDCA2 (ENSBGRG00000016906) #10	KCTD9 (ENSBGRG00000016782) #11	GNRH1 (ENSBGRG00000016731) #12	DOCK5 (ENSBGRG00000015972) #13	ENSBGRG00000015920 #14	NEFL (ENSBGRG00000015850) #15	NEFM (ENSBGRG00000015744) #16	ENSBGRG00000015724	ADAM7 (ENSBGRG00000014923) #17	ENSBGRG00000014430 #19	ENSBGRG00000014380	STC1 (ENSBGRG00000014320) #21	NKX2-6 (ENSBGRG00000014251) #22	NKX3-1 (ENSBGRG00000014189) #23	SLC25A37 (ENSBGRG00000014111) #24	ENTPD4 (ENSBGRG00000013839) #25	LOXL2 (ENSBGRG00000013709) #26	R3HCC1 (ENSBGRG00000013568) #27	CHMP7 (ENSBGRG00000013440) #28	ENSBGRG00000013324	ENSBGRG00000013289 #31	PEBP4 (ENSBGRG00000013188) #32	EGR3 (ENSBGRG00000013085) #33	BIN3 (ENSBGRG00000012804) #34	CCAR2 (ENSBGRG00000012594) #35	C8orf58 (ENSBGRG00000012373) #36	PDLIM2 (ENSBGRG00000012168) #37	ENSBGRG00000012132
Wild yak	MODERN SPECIES	1056											ADAM7 (ENSBMUG00000005939) #17	ADAMDEC1 (ENSBMUG00000006004) #19	ADAM28 (ENSBMUG00000006021) #20	ENSBMUG00000006030	STC1 (ENSBMUG00000006043) #21	NKX2-6 (ENSBMUG00000006056) #22	NKX3-1 (ENSBMUG00000006065) #23	SLC25A37 (ENSBMUG00000006085) #24
Bos_b	ANCESTRAL SPECIES	3	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00950000183031.B.e.b.a.a.a	ENSGT00940000154172.`b	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918.j #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT01100000263480.a.a.b.b.b.a.b.b.b.a.b.a.b.a.b	ENSGT00940000160558
Hybrid Bos Indicus	MODERN SPECIES	27	PNMA2 (ENSBIXG00005023950) #8	ENSBIXG00005023958	PPP2R2A (ENSBIXG00005024066) #7	EBF2 (ENSBIXG00005024188) #9	CDCA2 (ENSBIXG00005024231) #10	KCTD9 (ENSBIXG00005004143) #11	GNRH1 (ENSBIXG00005024264) #12	DOCK5 (ENSBIXG00005024516) #13	NEFL (ENSBIXG00005024596) #15	NEFM (ENSBIXG00005002572) #16	ADAM7 (ENSBIXG00005024699) #17	ENSBIXG00005025151 #20	ENSBIXG00005025234	ENSBIXG00005004295	STC1 (ENSBIXG00005025303) #21	NKX2-6 (ENSBIXG00005025314) #22	NKX3-1 (ENSBIXG00005025337) #23	SLC25A37 (ENSBIXG00005025367) #24	LOXL2 (ENSBIXG00005025479) #26	R3HCC1 (ENSBIXG00005025548) #27	CHMP7 (ENSBIXG00005025583) #28	ENSBIXG00005025600	ENSBIXG00005025709	RHOBTB2 (ENSBIXG00005026098) #31	ENSBIXG00005026205 #32	EGR3 (ENSBIXG00005026284) #33	BIN3 (ENSBIXG00005026346) #34	CCAR2 (ENSBIXG00005026417) #35	C8orf58 (ENSBIXG00005026447) #36	PDLIM2 (ENSBIXG00005026481) #37	ENSBIXG00005026487
Cow	MODERN SPECIES	27	PPP2R2A (ENSBTAG00000018317) #7	EBF2 (ENSBTAG00000040390) #9	CDCA2 (ENSBTAG00000002756) #10	KCTD9 (ENSBTAG00000012382) #11	GNRH1 (ENSBTAG00000000164) #12	DOCK5 (ENSBTAG00000015513) #13	NEFL (ENSBTAG00000021949) #15	NEFM (ENSBTAG00000039530)	ADAM7 (ENSBTAG00000039171) #17	ADAMDEC1 (ENSBTAG00000001125) #19	ADAM28 (ENSBTAG00000037929) #20	ENSBTAG00000038064	ENSBTAG00000048755	STC1 (ENSBTAG00000001687) #21	ENSBTAG00000051369	NKX2-6 (ENSBTAG00000014008) #22	NKX3-1 (ENSBTAG00000001221) #23	SLC25A37 (ENSBTAG00000019099) #24	ENTPD4 (ENSBTAG00000006768) #25	LOXL2 (ENSBTAG00000006214) #26	R3HCC1 (ENSBTAG00000025830) #27	CHMP7 (ENSBTAG00000013528) #28	RHOBTB2 (ENSBTAG00000035958) #31	ENSBTAG00000050001	PEBP4 (ENSBTAG00000015416) #32	EGR3 (ENSBTAG00000019293) #33	BIN3 (ENSBTAG00000005470) #34	CCAR2 (ENSBTAG00000005469) #35	C8H8orf58 (ENSBTAG00000005466) #36	PDLIM2 (ENSBTAG00000007369) #37	ENSBTAG00000054318
American bison	MODERN SPECIES	3177										ENSBBBG00000025051	ADAM7 (ENSBBBG00000007763) #17	ADAMDEC1 (ENSBBBG00000007853) #19	ADAM28 (ENSBBBG00000006709) #20	ENSBBBG00000025331	STC1 (ENSBBBG00000025351) #21	ENSBBBG00000025361 #22	SLC25A37 (ENSBBBG00000025366) #24	ENTPD4 (ENSBBBG00000025429) #25	LOXL2 (ENSBBBG00000025500) #26	R3HCC1 (ENSBBBG00000010600) #27	CHMP7 (ENSBBBG00000010611) #28	ENSBBBG00000010613
Camelidae	ANCESTRAL SPECIES	47	ENSGT01030000234597.a.b.a	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.f #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418.r #37	ENSGT00940000160558
Alpaca	MODERN SPECIES	6010																ENSVPAG00000006979 #22
Arabian camel	MODERN SPECIES	24	DPYSL2 (ENSCDRG00005018995)	PNMA2 (ENSCDRG00005018959) #8	BNIP3L (ENSCDRG00005018890)	PPP2R2A (ENSCDRG00005018721) #7	ENSCDRG00005018693	EBF2 (ENSCDRG00005018634) #9	CDCA2 (ENSCDRG00005018503) #10	KCTD9 (ENSCDRG00005018455) #11	GNRH1 (ENSCDRG00005018431) #12	DOCK5 (ENSCDRG00005018165) #13	NEFL (ENSCDRG00005018138) #15	ENSCDRG00005018075	ADAM7 (ENSCDRG00005017257) #17	ADAM28 (ENSCDRG00005016471) #20	STC1 (ENSCDRG00005016415) #21	ENSCDRG00005016389 #22	NKX3-1 (ENSCDRG00005016364) #23	SLC25A37 (ENSCDRG00005016317) #24	ENTPD4 (ENSCDRG00005016214) #25	LOXL2 (ENSCDRG00005016177) #26	R3HCC1 (ENSCDRG00005016059) #27	ENSCDRG00005016025	CHMP7 (ENSCDRG00005015938) #28	ENSCDRG00005015918	ENSCDRG00005015904 #29	ENSCDRG00005015882 #29	ENSCDRG00005015821 #29	RHOBTB2 (ENSCDRG00005015666) #31	PEBP4 (ENSCDRG00005015556) #32	EGR3 (ENSCDRG00005015507) #33	BIN3 (ENSCDRG00005015398) #34
Eulipotyphla	ANCESTRAL SPECIES	1908																ENSGT00940000162737 #22	ENSGT00940000160930 #23
Hedgehog	MODERN SPECIES	15659																NKX2-6 (ENSEEUG00000001108) #22	NKX3-1 (ENSEEUG00000001113) #23
Euarchontoglires	ANCESTRAL SPECIES	24	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00940000172945	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Primates	ANCESTRAL SPECIES	25	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Strepsirrhini	ANCESTRAL SPECIES	25	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Lemuriformes	ANCESTRAL SPECIES	32	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b.e #9	ENSGT00950000182859.A.a.a.b.f #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.a #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Mouse lemur	MODERN SPECIES	12	PPP2R2A (ENSMICG00000034854) #7	ENSMICG00000030813 #9	ENSMICG00000043737	ENSMICG00000015774 #9	CDCA2 (ENSMICG00000031889) #10	KCTD9 (ENSMICG00000016754) #11	GNRH1 (ENSMICG00000037976) #12	DOCK5 (ENSMICG00000016726) #13	NEFL (ENSMICG00000030432) #15	ENSMICG00000036167	ADAM7 (ENSMICG00000002694) #17	ADAMDEC1 (ENSMICG00000047490) #19	ENSMICG00000034192	ADAM28 (ENSMICG00000042341) #20	STC1 (ENSMICG00000032857) #21	NKX2-6 (ENSMICG00000042062) #22	NKX3-1 (ENSMICG00000011189) #23	SLC25A37 (ENSMICG00000034841) #24	ENTPD4 (ENSMICG00000011165) #25	LOXL2 (ENSMICG00000011154) #26	R3HCC1 (ENSMICG00000011146) #27	CHMP7 (ENSMICG00000011964) #28	ENSMICG00000043513 #29	RHOBTB2 (ENSMICG00000011180) #31	PEBP4 (ENSMICG00000005019) #32	EGR3 (ENSMICG00000029687) #33	BIN3 (ENSMICG00000007768) #34	CCAR2 (ENSMICG00000007751) #35	C8orf58 (ENSMICG00000017355) #36	PDLIM2 (ENSMICG00000003919) #37	SORBS3 (ENSMICG00000003915)
Lemuriformes_a	ANCESTRAL SPECIES	34	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b.e #9	ENSGT00950000182859.A.a.a.b.f #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957.a #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Coquerels sifaka	MODERN SPECIES	919	DPYSL2 (ENSPCOG00000027797)	BNIP3L (ENSPCOG00000026018)	PPP2R2A (ENSPCOG00000023269) #7	EBF2 (ENSPCOG00000027078) #9	CDCA2 (ENSPCOG00000023393) #10	KCTD9 (ENSPCOG00000020414) #11	GNRH1 (ENSPCOG00000024165) #12	DOCK5 (ENSPCOG00000016268) #13	NEFL (ENSPCOG00000026085) #15	NEFM (ENSPCOG00000022965) #16	ADAM7 (ENSPCOG00000026532) #17	ENSPCOG00000021910 #20	ENSPCOG00000008142	STC1 (ENSPCOG00000019531) #21	ENSPCOG00000026813	NKX2-6 (ENSPCOG00000021761) #22	NKX3-1 (ENSPCOG00000024990) #23	SLC25A37 (ENSPCOG00000028846) #24	ENTPD4 (ENSPCOG00000010184) #25	LOXL2 (ENSPCOG00000022542) #26	R3HCC1 (ENSPCOG00000027554) #27	CHMP7 (ENSPCOG00000007383) #28	ENSPCOG00000000697 #29	RHOBTB2 (ENSPCOG00000015995) #31	PEBP4 (ENSPCOG00000021149) #32	EGR3 (ENSPCOG00000014614) #33	ENSPCOG00000021166	BIN3 (ENSPCOG00000007346) #34	CCAR2 (ENSPCOG00000023051) #35	C8orf58 (ENSPCOG00000019584) #36	PDLIM2 (ENSPCOG00000028327) #37
Greater bamboo lemur	MODERN SPECIES	673									ENSPSMG00000007401 #13	NEFL (ENSPSMG00000007394) #15	NEFM (ENSPSMG00000007376) #16	ADAM7 (ENSPSMG00000007340) #17	ADAMDEC1 (ENSPSMG00000007297) #19	ADAM28 (ENSPSMG00000007277) #20	STC1 (ENSPSMG00000007248) #21	NKX2-6 (ENSPSMG00000007224) #22	NKX3-1 (ENSPSMG00000007221) #23	SLC25A37 (ENSPSMG00000007215) #24	ENTPD4 (ENSPSMG00000006961) #25	LOXL2 (ENSPSMG00000006788) #26	R3HCC1 (ENSPSMG00000006721) #27	CHMP7 (ENSPSMG00000006684) #28	ENSPSMG00000006654 #29	RHOBTB2 (ENSPSMG00000006602) #31	PEBP4 (ENSPSMG00000006592) #32	EGR3 (ENSPSMG00000006585) #33	BIN3 (ENSPSMG00000006576) #34	CCAR2 (ENSPSMG00000006549) #35	C8orf58 (ENSPSMG00000006508) #36	PDLIM2 (ENSPSMG00000006490) #37	SORBS3 (ENSPSMG00000006317)
Bushbaby	MODERN SPECIES	189	DPYSL2 (ENSOGAG00000011250)	PNMA2 (ENSOGAG00000011246) #8	BNIP3L (ENSOGAG00000003163)	PPP2R2A (ENSOGAG00000034741) #7	EBF2 (ENSOGAG00000010783) #9	CDCA2 (ENSOGAG00000002970) #10	KCTD9 (ENSOGAG00000002969) #11	GNRH1 (ENSOGAG00000016753) #12	DOCK5 (ENSOGAG00000002967) #13	NEFL (ENSOGAG00000015179) #15	ENSOGAG00000026104	ADAM7 (ENSOGAG00000015171) #17	ADAMDEC1 (ENSOGAG00000015169) #19	ADAM28 (ENSOGAG00000015163) #20	STC1 (ENSOGAG00000010809) #21	NKX2-6 (ENSOGAG00000026099) #22	NKX3-1 (ENSOGAG00000001303) #23	SLC25A37 (ENSOGAG00000001295) #24	ENTPD4 (ENSOGAG00000001293) #25	LOXL2 (ENSOGAG00000001292) #26	R3HCC1 (ENSOGAG00000001291) #27	CHMP7 (ENSOGAG00000001289) #28	ENSOGAG00000014793 #29	RHOBTB2 (ENSOGAG00000014791) #31	EGR3 (ENSOGAG00000027173) #33	BIN3 (ENSOGAG00000010586) #34	CCAR2 (ENSOGAG00000010578) #35	C8orf58 (ENSOGAG00000032875) #36	PDLIM2 (ENSOGAG00000010575) #37	SORBS3 (ENSOGAG00000010567)	PPP3CC (ENSOGAG00000010563)
Haplorrhini	ANCESTRAL SPECIES	27	ENSGT01030000234597.a.b.a	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Simiiformes	ANCESTRAL SPECIES	25	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.k.b #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00910000147907	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164831	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35
Platyrrhini	ANCESTRAL SPECIES	29	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.l #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00910000147907	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164831	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B.g #34	ENSGT00530000063672.b #35
Cebidae	ANCESTRAL SPECIES	30	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.l #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B.g.b #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Cebidae_a	ANCESTRAL SPECIES	44	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.l #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B.g.b #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Capuchin	MODERN SPECIES	221				ENSCCAG00000017319 #9	CDCA2 (ENSCCAG00000026541) #10	ENSCCAG00000030611 #11	GNRH1 (ENSCCAG00000030404) #12	DOCK5 (ENSCCAG00000033128) #13	ENSCCAG00000004867	NEFL (ENSCCAG00000035869) #15	NEFM (ENSCCAG00000028697) #16	ADAM7 (ENSCCAG00000028360) #17	ADAMDEC1 (ENSCCAG00000034847) #19	ADAM28 (ENSCCAG00000021142) #20	STC1 (ENSCCAG00000029913) #21	NKX2-6 (ENSCCAG00000030537) #22	NKX3-1 (ENSCCAG00000029164) #23	SLC25A37 (ENSCCAG00000029132) #24	ENTPD4 (ENSCCAG00000022243) #25	LOXL2 (ENSCCAG00000032063) #26	R3HCC1 (ENSCCAG00000037811) #27	CHMP7 (ENSCCAG00000028089) #28	TNFRSF10A (ENSCCAG00000028468) #29	TNFRSF10B (ENSCCAG00000020824)	RHOBTB2 (ENSCCAG00000027624) #31	PEBP4 (ENSCCAG00000035666) #32	EGR3 (ENSCCAG00000030322) #33	ENSCCAG00000031619 #34	CCAR2 (ENSCCAG00000026081) #35	C8orf58 (ENSCCAG00000036764) #36	PDLIM2 (ENSCCAG00000038057) #37
Bolivian squirrel monkey	MODERN SPECIES	132	ADRA1A (ENSSBOG00000019482)	DPYSL2 (ENSSBOG00000022904)	BNIP3L (ENSSBOG00000001484)	PPP2R2A (ENSSBOG00000022095) #7	EBF2 (ENSSBOG00000029332) #9	CDCA2 (ENSSBOG00000025034) #10	KCTD9 (ENSSBOG00000020467) #11	GNRH1 (ENSSBOG00000030355) #12	DOCK5 (ENSSBOG00000018389) #13	ENSSBOG00000031985 #15	ENSSBOG00000026028	ADAM7 (ENSSBOG00000033466) #17	ADAMDEC1 (ENSSBOG00000023422) #19	ADAM28 (ENSSBOG00000021104) #20	STC1 (ENSSBOG00000008335) #21	NKX2-6 (ENSSBOG00000001212) #22	NKX3-1 (ENSSBOG00000031270) #23	ENSSBOG00000030155	ENSSBOG00000027698	SLC25A37 (ENSSBOG00000033528) #24	ENTPD4 (ENSSBOG00000023265) #25	LOXL2 (ENSSBOG00000025403) #26	R3HCC1 (ENSSBOG00000022590) #27	CHMP7 (ENSSBOG00000021845) #28	TNFRSF10A (ENSSBOG00000030969) #29	ENSSBOG00000032163	ENSSBOG00000015163	TNFRSF10B (ENSSBOG00000031524)	RHOBTB2 (ENSSBOG00000034058) #31	PEBP4 (ENSSBOG00000031968) #32	EGR3 (ENSSBOG00000013814) #33
Marmoset	MODERN SPECIES	4	CDCA2 (ENSCJAG00000019958) #10	KCTD9 (ENSCJAG00000019969) #11	DOCK5 (ENSCJAG00000019986) #13	NEFL (ENSCJAG00000020035) #15	ENSCJAG00000010608	ENSCJAG00000082023	NEFM (ENSCJAG00000020047) #16	ENSCJAG00000076019	ENSCJAG00000070069	ADAM7 (ENSCJAG00000020053) #17	ADAMDEC1 (ENSCJAG00000020062) #19	ADAM28 (ENSCJAG00000020075) #20	ENSCJAG00000064111	ENSCJAG00000082609	STC1 (ENSCJAG00000081929) #21	NKX2-6 (ENSCJAG00000085390) #22	NKX3-1 (ENSCJAG00000060555) #23	ENSCJAG00000061125	SLC25A37 (ENSCJAG00000076826) #24	LOXL2 (ENSCJAG00000020099) #26	R3HCC1 (ENSCJAG00000020118) #27	CHMP7 (ENSCJAG00000020123) #28	TNFRSF10A (ENSCJAG00000041514) #29	TNFRSF10B (ENSCJAG00000020135)	RHOBTB2 (ENSCJAG00000020143) #31	PEBP4 (ENSCJAG00000020158) #32	EGR3 (ENSCJAG00000059573) #33	ENSCJAG00000020166 #34	CCAR2 (ENSCJAG00000020174) #35	C8orf58 (ENSCJAG00000020218) #36	PDLIM2 (ENSCJAG00000020226) #37
Mas night monkey	MODERN SPECIES	974	DPYSL2 (ENSANAG00000034307)	ENSANAG00000031085	BNIP3L (ENSANAG00000025801)	PPP2R2A (ENSANAG00000033237) #7	EBF2 (ENSANAG00000022835) #9	CDCA2 (ENSANAG00000037820) #10	ENSANAG00000025804 #11	GNRH1 (ENSANAG00000034874) #12	DOCK5 (ENSANAG00000032901) #13	NEFL (ENSANAG00000022798) #15	NEFM (ENSANAG00000029941) #16	ADAM7 (ENSANAG00000024071) #17	ADAMDEC1 (ENSANAG00000023742) #19	ADAM28 (ENSANAG00000026076) #20	STC1 (ENSANAG00000026165) #21	NKX2-6 (ENSANAG00000027024) #22	NKX3-1 (ENSANAG00000037342) #23	SLC25A37 (ENSANAG00000035262) #24	ENSANAG00000034733	ENTPD4 (ENSANAG00000038166) #25	LOXL2 (ENSANAG00000021247) #26	R3HCC1 (ENSANAG00000036169) #27	CHMP7 (ENSANAG00000019835) #28	TNFRSF10A (ENSANAG00000036835) #29	TNFRSF10D (ENSANAG00000024101)	TNFRSF10B (ENSANAG00000032145)	RHOBTB2 (ENSANAG00000022868) #31	PEBP4 (ENSANAG00000033373) #32	EGR3 (ENSANAG00000037983) #33	ENSANAG00000001773 #34	CCAR2 (ENSANAG00000037041) #35
Catarrhini	ANCESTRAL SPECIES	15	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00960000186788	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.k.b.a #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00910000147907	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34
Hominoidea	ANCESTRAL SPECIES	14	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00960000186788	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.k.b.a #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35
Hominidae	ANCESTRAL SPECIES	15	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00960000186788	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.k.b.a #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00550000076401	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	13	ENSGT00960000186788	ENSGT00390000013415.a.b	ENSGT00390000010355.q.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.k.b.a #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00550000076401	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34
Homo/Pan group	ANCESTRAL SPECIES	12	ENSGT00960000186788	ENSGT00390000013415.a.b	ENSGT00390000010355.q.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.l #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00550000076401	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34
Pan	ANCESTRAL SPECIES	30	ENSGT00960000186788	ENSGT00390000013415.a.b	ENSGT00390000010355.q.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.l #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00550000076401	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34
Bonobo	MODERN SPECIES	21	ENSPPAG00000040176	BNIP3L (ENSPPAG00000036943)	ENSPPAG00000033286	PPP2R2A (ENSPPAG00000035123) #7	EBF2 (ENSPPAG00000030675) #9	CDCA2 (ENSPPAG00000033215) #10	ENSPPAG00000030819 #11	GNRH1 (ENSPPAG00000028067) #12	DOCK5 (ENSPPAG00000040985) #13	NEFL (ENSPPAG00000039333) #15	NEFM (ENSPPAG00000029966) #16	ADAM7 (ENSPPAG00000042630) #17	ADAMDEC1 (ENSPPAG00000038047) #19	ADAM28 (ENSPPAG00000035327) #20	STC1 (ENSPPAG00000029446) #21	NKX2-6 (ENSPPAG00000027939) #22	NKX3-1 (ENSPPAG00000027435) #23	ENSPPAG00000033094	SLC25A37 (ENSPPAG00000018748) #24	ENSPPAG00000033689	ENTPD4 (ENSPPAG00000029950) #25	LOXL2 (ENSPPAG00000018080) #26	R3HCC1 (ENSPPAG00000033165) #27	CHMP7 (ENSPPAG00000044136) #28	TNFRSF10A (ENSPPAG00000040961) #29	TNFRSF10D (ENSPPAG00000034029)	TNFRSF10C (ENSPPAG00000029426)	TNFRSF10B (ENSPPAG00000001205)	RHOBTB2 (ENSPPAG00000030792) #31	PEBP4 (ENSPPAG00000042228) #32	EGR3 (ENSPPAG00000029705) #33
Chimpanzee	MODERN SPECIES	21	ENSPTRG00000051226	BNIP3L (ENSPTRG00000020097)	ENSPTRG00000047485	PPP2R2A (ENSPTRG00000042450) #7	EBF2 (ENSPTRG00000003058) #9	CDCA2 (ENSPTRG00000020094) #10	KCTD9 (ENSPTRG00000020092) #11	GNRH1 (ENSPTRG00000020091) #12	DOCK5 (ENSPTRG00000020090) #13	NEFL (ENSPTRG00000045792) #15	NEFM (ENSPTRG00000020087) #16	ADAM7 (ENSPTRG00000020086) #17	ADAMDEC1 (ENSPTRG00000020085) #19	ADAM28 (ENSPTRG00000020084) #20	STC1 (ENSPTRG00000020083) #21	NKX2-6 (ENSPTRG00000020082) #22	NKX3-1 (ENSPTRG00000020081) #23	ENSPTRG00000052642	ENSPTRG00000042744	SLC25A37 (ENSPTRG00000020079) #24	ENSPTRG00000044788	ENTPD4 (ENSPTRG00000020078) #25	LOXL2 (ENSPTRG00000047037) #26	R3HCC1 (ENSPTRG00000020076) #27	CHMP7 (ENSPTRG00000020075) #28	TNFRSF10A (ENSPTRG00000020074) #29	TNFRSF10D (ENSPTRG00000031023)	TNFRSF10C (ENSPTRG00000020072)	TNFRSF10B (ENSPTRG00000020070)	RHOBTB2 (ENSPTRG00000020069) #31	PEBP4 (ENSPTRG00000020068) #32
Human	MODERN SPECIES	20	DPYSL2 (ENSG00000092964)	PNMA2 (ENSG00000240694) #8	BNIP3L (ENSG00000104765)	PPP2R2A (ENSG00000221914) #7	EBF2 (ENSG00000221818) #9	CDCA2 (ENSG00000184661) #10	KCTD9 (ENSG00000104756) #11	GNRH1 (ENSG00000147437) #12	DOCK5 (ENSG00000147459) #13	NEFL (ENSG00000277586) #15	NEFM (ENSG00000104722) #16	ADAM7 (ENSG00000069206) #17	ADAMDEC1 (ENSG00000134028) #19	ADAM28 (ENSG00000042980) #20	STC1 (ENSG00000159167) #21	NKX2-6 (ENSG00000180053) #22	NKX3-1 (ENSG00000167034) #23	SLC25A37 (ENSG00000147454) #24	ENTPD4 (ENSG00000197217) #25	LOXL2 (ENSG00000134013) #26	R3HCC1 (ENSG00000104679) #27	CHMP7 (ENSG00000147457) #28	TNFRSF10A (ENSG00000104689) #29	TNFRSF10D (ENSG00000173530)	TNFRSF10C (ENSG00000173535)	ENSG00000284956	TNFRSF10B (ENSG00000120889)	RHOBTB2 (ENSG00000008853) #31	PEBP4 (ENSG00000134020) #32	EGR3 (ENSG00000179388) #33	BIN3 (ENSG00000147439) #34
Gorilla	MODERN SPECIES	21	ENSGGOG00000038243	BNIP3L (ENSGGOG00000041240)	ENSGGOG00000027436	PPP2R2A (ENSGGOG00000011500) #7	EBF2 (ENSGGOG00000001585) #9	CDCA2 (ENSGGOG00000022784) #10	KCTD9 (ENSGGOG00000004480) #11	GNRH1 (ENSGGOG00000004479) #12	DOCK5 (ENSGGOG00000004460) #13	NEFL (ENSGGOG00000001429) #15	NEFM (ENSGGOG00000009880) #16	ADAM7 (ENSGGOG00000001012) #17	ADAMDEC1 (ENSGGOG00000001215) #19	ADAM28 (ENSGGOG00000017021) #20	STC1 (ENSGGOG00000026322) #21	NKX2-6 (ENSGGOG00000014372) #22	NKX3-1 (ENSGGOG00000041851) #23	ENSGGOG00000027906	SLC25A37 (ENSGGOG00000005025) #24	ENTPD4 (ENSGGOG00000010428) #25	LOXL2 (ENSGGOG00000013825) #26	R3HCC1 (ENSGGOG00000013817) #27	CHMP7 (ENSGGOG00000002536) #28	TNFRSF10A (ENSGGOG00000002170) #29	TNFRSF10D (ENSGGOG00000008019)	TNFRSF10C (ENSGGOG00000037003)	TNFRSF10B (ENSGGOG00000011051)	PEBP4 (ENSGGOG00000002433) #32	EGR3 (ENSGGOG00000002431) #33	BIN3 (ENSGGOG00000002428) #34	CCAR2 (ENSGGOG00000002424) #35
Orangutan	MODERN SPECIES	21	ENSPPYG00000033464	BNIP3L (ENSPPYG00000038394)	PPP2R2A (ENSPPYG00000018455) #7	EBF2 (ENSPPYG00000018454) #9	CDCA2 (ENSPPYG00000018453) #10	KCTD9 (ENSPPYG00000018452) #11	GNRH1 (ENSPPYG00000018451) #12	DOCK5 (ENSPPYG00000031126) #13	ENSPPYG00000033175	NEFL (ENSPPYG00000018449) #15	NEFM (ENSPPYG00000018448) #16	ADAM7 (ENSPPYG00000018447) #17	ADAMDEC1 (ENSPPYG00000018446) #19	ADAM28 (ENSPPYG00000018445) #20	STC1 (ENSPPYG00000018444) #21	NKX2-6 (ENSPPYG00000018443) #22	NKX3-1 (ENSPPYG00000018442) #23	ENSPPYG00000031644	ENSPPYG00000018439	ENSPPYG00000018438 #24	LOXL2 (ENSPPYG00000018437) #26	R3HCC1 (ENSPPYG00000018436) #27	CHMP7 (ENSPPYG00000018435) #28	TNFRSF10A (ENSPPYG00000031309) #29	TNFRSF10D (ENSPPYG00000018433)	ENSPPYG00000018432	TNFRSF10B (ENSPPYG00000018431)	RHOBTB2 (ENSPPYG00000018430) #31	PEBP4 (ENSPPYG00000018429) #32	EGR3 (ENSPPYG00000018428) #33	ENSPPYG00000018427 #34
Gibbon	MODERN SPECIES	23	DPYSL2 (ENSNLEG00000016244)	PNMA2 (ENSNLEG00000019079) #8	BNIP3L (ENSNLEG00000016221)	PPP2R2A (ENSNLEG00000028888) #7	EBF2 (ENSNLEG00000016189) #9	CDCA2 (ENSNLEG00000016169) #10	KCTD9 (ENSNLEG00000016156) #11	GNRH1 (ENSNLEG00000032497) #12	DOCK5 (ENSNLEG00000016075) #13	NEFL (ENSNLEG00000016066) #15	ENSNLEG00000016060	ADAM7 (ENSNLEG00000016022) #17	ADAMDEC1 (ENSNLEG00000015990) #19	ADAM28 (ENSNLEG00000015981) #20	STC1 (ENSNLEG00000015971) #21	NKX2-6 (ENSNLEG00000015970) #22	NKX3-1 (ENSNLEG00000030037) #23	ENSNLEG00000029971	ENSNLEG00000035146	SLC25A37 (ENSNLEG00000015964) #24	ENTPD4 (ENSNLEG00000015948) #25	LOXL2 (ENSNLEG00000026866) #26	R3HCC1 (ENSNLEG00000015944) #27	CHMP7 (ENSNLEG00000015905) #28	TNFRSF10A (ENSNLEG00000015888) #29	ENSNLEG00000033814	ENSNLEG00000015879	RHOBTB2 (ENSNLEG00000015848) #31	ENSNLEG00000033467 #32	EGR3 (ENSNLEG00000015829) #33	BIN3 (ENSNLEG00000029150) #34
Cercopithecidae	ANCESTRAL SPECIES	14	ENSGT00960000186788	ENSGT00390000013415.a.b	ENSGT00390000010355.r	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.k.b.a #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00910000147038	ENSGT00940000158607 #24	ENSGT00910000147907	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33
Cercopithecinae	ANCESTRAL SPECIES	16	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00390000010355.r	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.k.b.a #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00910000147038	ENSGT00940000158607 #24	ENSGT00940000155597.n.b	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33
Cercopithecinae_a	ANCESTRAL SPECIES	15	ENSGT00390000013415.a.b	ENSGT00390000010355.r	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.k.b.a #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00910000147586	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00910000147038	ENSGT00940000158607 #24	ENSGT00940000155597.n.b	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33
Macaca	ANCESTRAL SPECIES	14	ENSGT00390000010355.r	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.k.b.a #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00910000147586	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00910000147038	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182922.a.a.a.b.a.a.a
Pig-tailed macaque	MODERN SPECIES	579	PPP2R2A (ENSMNEG00000023471) #7	ENSMNEG00000010649	EBF2 (ENSMNEG00000040606) #9	ENSMNEG00000035457	CDCA2 (ENSMNEG00000036287) #10	KCTD9 (ENSMNEG00000044328) #11	GNRH1 (ENSMNEG00000042496) #12	DOCK5 (ENSMNEG00000043546) #13	ENSMNEG00000022002	NEFL (ENSMNEG00000039854) #15	NEFM (ENSMNEG00000028916) #16	ADAM7 (ENSMNEG00000041516) #17	ADAMDEC1 (ENSMNEG00000027019) #19	ADAM28 (ENSMNEG00000035956) #20	STC1 (ENSMNEG00000044899) #21	NKX2-6 (ENSMNEG00000029977) #22	NKX3-1 (ENSMNEG00000029607) #23	SLC25A37 (ENSMNEG00000033209) #24	ENSMNEG00000042125	ENTPD4 (ENSMNEG00000028969) #25	LOXL2 (ENSMNEG00000041821) #26	R3HCC1 (ENSMNEG00000043283) #27	CHMP7 (ENSMNEG00000035503) #28	TNFRSF10D (ENSMNEG00000042359)	TNFRSF10A (ENSMNEG00000034319) #29	ENSMNEG00000044970	TNFRSF10B (ENSMNEG00000035485)	RHOBTB2 (ENSMNEG00000041610) #31	PEBP4 (ENSMNEG00000030811) #32	EGR3 (ENSMNEG00000035687) #33	BIN3 (ENSMNEG00000016873) #34
Macaca_a	ANCESTRAL SPECIES	16	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.k.b.a #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182922.a.a.a.b.a.a.a	ENSGT00950000182882.B #34
Rhesus	MODERN SPECIES	18	BNIP3L (ENSMMUG00000023646)	PPP2R2A (ENSMMUG00000041905) #7	EBF2 (ENSMMUG00000005760) #9	CDCA2 (ENSMMUG00000010582) #10	KCTD9 (ENSMMUG00000010151) #11	GNRH1 (ENSMMUG00000029018) #12	DOCK5 (ENSMMUG00000008028) #13	NEFL (ENSMMUG00000003348) #15	NEFM (ENSMMUG00000000639) #16	ENSMMUG00000058642	ENSMMUG00000054167	ADAM7 (ENSMMUG00000007909) #17	ADAMDEC1 (ENSMMUG00000005318) #19	ADAM28 (ENSMMUG00000005317) #20	STC1 (ENSMMUG00000046186) #21	NKX2-6 (ENSMMUG00000020863) #22	NKX3-1 (ENSMMUG00000009796) #23	ENSMMUG00000064526	SLC25A37 (ENSMMUG00000054404) #24	ENTPD4 (ENSMMUG00000016658) #25	LOXL2 (ENSMMUG00000050549) #26	R3HCC1 (ENSMMUG00000016655) #27	CHMP7 (ENSMMUG00000016653) #28	TNFRSF10A (ENSMMUG00000007542) #29	ENSMMUG00000014947	ENSMMUG00000061712	TNFRSF10B (ENSMMUG00000048076)	RHOBTB2 (ENSMMUG00000007540) #31	ENSMMUG00000052501	PEBP4 (ENSMMUG00000018345) #32	EGR3 (ENSMMUG00000058396) #33
Crab-eating macaque	MODERN SPECIES	18	PNMA2 (ENSMFAG00000000029) #8	BNIP3L (ENSMFAG00000003324)	PPP2R2A (ENSMFAG00000045160) #7	EBF2 (ENSMFAG00000036796) #9	CDCA2 (ENSMFAG00000044937) #10	KCTD9 (ENSMFAG00000000476) #11	GNRH1 (ENSMFAG00000052417) #12	DOCK5 (ENSMFAG00000001732) #13	NEFL (ENSMFAG00000031550) #15	ENSMFAG00000044080	ENSMFAG00000057085	ADAM7 (ENSMFAG00000045244) #17	ADAMDEC1 (ENSMFAG00000007172) #19	ADAM28 (ENSMFAG00000039137) #20	STC1 (ENSMFAG00000060775) #21	NKX2-6 (ENSMFAG00000040141) #22	NKX3-1 (ENSMFAG00000047611) #23	SLC25A37 (ENSMFAG00000027746) #24	ENTPD4 (ENSMFAG00000037815) #25	LOXL2 (ENSMFAG00000041868) #26	R3HCC1 (ENSMFAG00000032894) #27	CHMP7 (ENSMFAG00000031228) #28	ENSMFAG00000009371	ENSMFAG00000065248	TNFRSF10A (ENSMFAG00000029610) #29	ENSMFAG00000051335	TNFRSF10B (ENSMFAG00000002092)	RHOBTB2 (ENSMFAG00000036619) #31	PEBP4 (ENSMFAG00000036169) #32	EGR3 (ENSMFAG00000065520) #33	ENSMFAG00000047841
Cercopithecinae_b	ANCESTRAL SPECIES	9	ENSGT00390000013415.a.b	ENSGT00390000010355.r	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.k.b.a #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00910000147586	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00910000147038	ENSGT00940000158607 #24	ENSGT00940000155597.n.b	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33
Cercopithecinae_d	ANCESTRAL SPECIES	50	ENSGT00390000010355.r	ENSGT00390000012635.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.k.b.a #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00910000147586	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00910000147038	ENSGT00940000158607 #24	ENSGT00940000155597.n.b	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000164831	ENSGT00940000165140	ENSGT00940000164765	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33
Sooty mangabey	MODERN SPECIES	555	ENSCATG00000045185	ENSCATG00000045206	PPP2R2A (ENSCATG00000037089) #7	EBF2 (ENSCATG00000039203) #9	CDCA2 (ENSCATG00000031991) #10	KCTD9 (ENSCATG00000038906) #11	GNRH1 (ENSCATG00000041582) #12	DOCK5 (ENSCATG00000043562) #13	ENSCATG00000030152	NEFL (ENSCATG00000042551) #15	NEFM (ENSCATG00000042530) #16	ADAM7 (ENSCATG00000041478) #17	ADAMDEC1 (ENSCATG00000043054) #19	ADAM28 (ENSCATG00000043598) #20	STC1 (ENSCATG00000026956) #21	NKX2-6 (ENSCATG00000045337) #22	NKX3-1 (ENSCATG00000008649) #23	SLC25A37 (ENSCATG00000035944) #24	ENSCATG00000035953	ENSCATG00000036960	ENTPD4 (ENSCATG00000041935) #25	LOXL2 (ENSCATG00000038025) #26	R3HCC1 (ENSCATG00000032971) #27	CHMP7 (ENSCATG00000015291) #28	TNFRSF10A (ENSCATG00000029264) #29	TNFRSF10D (ENSCATG00000043425)	TNFRSF10C (ENSCATG00000038580)	TNFRSF10B (ENSCATG00000038988)	RHOBTB2 (ENSCATG00000035570) #31	PEBP4 (ENSCATG00000030855) #32	EGR3 (ENSCATG00000030973) #33
Olive baboon	MODERN SPECIES	18	PNMA2 (ENSPANG00000007854) #8	ENSPANG00000048024	EBF2 (ENSPANG00000020231) #9	CDCA2 (ENSPANG00000008115) #10	KCTD9 (ENSPANG00000019100) #11	DOCK5 (ENSPANG00000005750) #13	NEFL (ENSPANG00000011988) #15	NEFM (ENSPANG00000018460) #16	ENSPANG00000038971	ENSPANG00000030915	ADAM7 (ENSPANG00000017131) #17	ADAMDEC1 (ENSPANG00000022045) #19	ADAM28 (ENSPANG00000005176) #20	ENSPANG00000005177	STC1 (ENSPANG00000048289) #21	NKX2-6 (ENSPANG00000019014) #22	NKX3-1 (ENSPANG00000004934) #23	SLC25A37 (ENSPANG00000000653) #24	ENTPD4 (ENSPANG00000000652) #25	LOXL2 (ENSPANG00000011564) #26	R3HCC1 (ENSPANG00000000453) #27	CHMP7 (ENSPANG00000024531) #28	TNFRSF10A (ENSPANG00000005889) #29	ENSPANG00000033702	ENSPANG00000046450	TNFRSF10B (ENSPANG00000009912)	RHOBTB2 (ENSPANG00000020434) #31	PEBP4 (ENSPANG00000022788) #32	EGR3 (ENSPANG00000019015) #33	BIN3 (ENSPANG00000020851) #34	CCAR2 (ENSPANG00000018828) #35
Vervet Monkey	MODERN SPECIES	27	PNMA2 (ENSCSAG00000018524) #8	BNIP3L (ENSCSAG00000016055)	PPP2R2A (ENSCSAG00000016060) #7	ENSCSAG00000016062 #9	ENSCSAG00000016068 #9	CDCA2 (ENSCSAG00000016076) #10	ENSCSAG00000016100 #11	GNRH1 (ENSCSAG00000016109) #12	DOCK5 (ENSCSAG00000016128) #13	NEFL (ENSCSAG00000016132) #15	NEFM (ENSCSAG00000016135) #16	ADAM7 (ENSCSAG00000016187) #17	ADAMDEC1 (ENSCSAG00000016207) #19	ADAM28 (ENSCSAG00000016220) #20	STC1 (ENSCSAG00000016224) #21	NKX2-6 (ENSCSAG00000016228) #22	NKX3-1 (ENSCSAG00000016229) #23	SLC25A37 (ENSCSAG00000016232) #24	ENTPD4 (ENSCSAG00000016236) #25	LOXL2 (ENSCSAG00000016241) #26	R3HCC1 (ENSCSAG00000016250) #27	CHMP7 (ENSCSAG00000016259) #28	TNFRSF10A (ENSCSAG00000016263) #29	TNFRSF10D (ENSCSAG00000016271)	TNFRSF10C (ENSCSAG00000016281)	TNFRSF10B (ENSCSAG00000016289)	RHOBTB2 (ENSCSAG00000016294) #31	PEBP4 (ENSCSAG00000016301) #32	EGR3 (ENSCSAG00000016304) #33	BIN3 (ENSCSAG00000016333) #34	CCAR2 (ENSCSAG00000016353) #35
Rhinopithecus	ANCESTRAL SPECIES	55	ENSGT00390000013415.a.b	ENSGT00390000010355.r	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.k.b.b.a #11	ENSGT00940000154314.k.b.a #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00910000147038	ENSGT00940000158607 #24
Black snub-nosed monkey	MODERN SPECIES	98	BNIP3L (ENSRBIG00000043157)	ENSRBIG00000031494	PPP2R2A (ENSRBIG00000028497) #7	EBF2 (ENSRBIG00000011662) #9	ENSRBIG00000026024	CDCA2 (ENSRBIG00000039250) #10	ENSRBIG00000044540 #11	GNRH1 (ENSRBIG00000042433) #12	DOCK5 (ENSRBIG00000022198) #13	NEFL (ENSRBIG00000033397) #15	NEFM (ENSRBIG00000044501) #16	ADAM7 (ENSRBIG00000022906) #17	ADAMDEC1 (ENSRBIG00000032045) #19	ADAM28 (ENSRBIG00000020078) #20	STC1 (ENSRBIG00000032107) #21	NKX2-6 (ENSRBIG00000041260) #22	NKX3-1 (ENSRBIG00000023436) #23	SLC25A37 (ENSRBIG00000032128) #24	ENSRBIG00000038195	ENSRBIG00000006016	ENTPD4 (ENSRBIG00000006283) #25	LOXL2 (ENSRBIG00000040838) #26	R3HCC1 (ENSRBIG00000028045) #27	CHMP7 (ENSRBIG00000002287) #28	TNFRSF10A (ENSRBIG00000030697) #29
Golden snub-nosed monkey	MODERN SPECIES	3147															STC1 (ENSRROG00000042390) #21	NKX2-6 (ENSRROG00000041779) #22	NKX3-1 (ENSRROG00000035532) #23	ENSRROG00000042740	SLC25A37 (ENSRROG00000009524) #24	ENSRROG00000035963	ENSRROG00000020274 #25
Euarchontoglires_A	ANCESTRAL SPECIES	25	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00940000172945	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Glires	ANCESTRAL SPECIES	26	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00940000172945	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Rodentia	ANCESTRAL SPECIES	21	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00940000172945	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Rodentia_B	ANCESTRAL SPECIES	24	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558	ENSGT00940000154115.c.a
Myomorpha	ANCESTRAL SPECIES	29	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558	ENSGT00940000154115.c.a
Muroidea	ANCESTRAL SPECIES	26	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558	ENSGT00940000154115.c.a
Muroidea_A	ANCESTRAL SPECIES	10	ENSGT00860000136257	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162427.j	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Cricetidae	ANCESTRAL SPECIES	15	ENSGT00860000136257	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162427.j	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Cricetidae_B	ANCESTRAL SPECIES	11	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162427.j	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Northern American deer mouse	MODERN SPECIES	22	ENSPEMG00000023103	Ppp2r2a (ENSPEMG00000022593) #7	Ebf2 (ENSPEMG00000007776) #9	Cdca2 (ENSPEMG00000021129) #10	Kctd9 (ENSPEMG00000020895) #11	Gnrh1 (ENSPEMG00000030807) #12	Dock5 (ENSPEMG00000023361) #13	Nefl (ENSPEMG00000020765) #15	Nefm (ENSPEMG00000020646)	Adam7 (ENSPEMG00000012803) #17	Adamdec1 (ENSPEMG00000004402) #19	Adam28 (ENSPEMG00000015520) #20	ENSPEMG00000030090	ENSPEMG00000027026	Stc1 (ENSPEMG00000027424) #21	Nkx2-6 (ENSPEMG00000005851) #22	Nkx3-1 (ENSPEMG00000026785) #23	Slc25a37 (ENSPEMG00000017275) #24	Synb (ENSPEMG00000024700)	ENSPEMG00000018234 #25	Loxl2 (ENSPEMG00000016856) #26	R3hcc1 (ENSPEMG00000007118) #27	ENSPEMG00000028382 #28	ENSPEMG00000029378	Rhobtb2 (ENSPEMG00000001035) #31	Pebp4 (ENSPEMG00000001033) #32	Egr3 (ENSPEMG00000024575) #33	Bin3 (ENSPEMG00000015277) #34	Ccar2 (ENSPEMG00000009116) #35	9930012K11Rik (ENSPEMG00000016741) #36	Pdlim2 (ENSPEMG00000011746) #37
Prairie vole	MODERN SPECIES	4	Pnma2 (ENSMOCG00000003712) #8	ENSMOCG00000018617	Ppp2r2a (ENSMOCG00000011317) #7	ENSMOCG00000005189	Ebf2 (ENSMOCG00000007295) #9	Cdca2 (ENSMOCG00000002388) #10	Kctd9 (ENSMOCG00000016913) #11	Gnrh1 (ENSMOCG00000003491) #12	Dock5 (ENSMOCG00000009188) #13	Nefl (ENSMOCG00000012988) #15	ENSMOCG00000009013 #16	Adam7 (ENSMOCG00000022709) #17	Adamdec1 (ENSMOCG00000021493) #19	Adam28 (ENSMOCG00000010153) #20	Stc1 (ENSMOCG00000003351) #21	Nkx2-6 (ENSMOCG00000002130) #22	Nkx3-1 (ENSMOCG00000001078) #23	Slc25a37 (ENSMOCG00000000710) #24	Synb (ENSMOCG00000018779)	ENSMOCG00000021822 #25	Loxl2 (ENSMOCG00000021272) #26	R3hcc1 (ENSMOCG00000018508) #27	Chmp7 (ENSMOCG00000015254) #28	ENSMOCG00000011818	Cenpj (ENSMOCG00000006479)	Parp4 (ENSMOCG00000016582)	ENSMOCG00000009441	Pspc1 (ENSMOCG00000006060)	Zmym5 (ENSMOCG00000001655)	Zmym2 (ENSMOCG00000019626)	Gja3 (ENSMOCG00000016618)
Cricetinae	ANCESTRAL SPECIES	18	ENSGT00860000136257	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Chinese hamster chok1gshd	MODERN SPECIES	3	ENSCGRG00001010421	Pnma2 (ENSCGRG00001010753) #8	Bnip3l (ENSCGRG00001021504)	Ppp2r2a (ENSCGRG00001015307) #7	Ebf2 (ENSCGRG00001001432) #9	Cdca2 (ENSCGRG00001022349) #10	Kctd9 (ENSCGRG00001022797) #11	Gnrh1 (ENSCGRG00001000327) #12	Dock5 (ENSCGRG00001021195) #13	Nefl (ENSCGRG00001016408) #15	ENSCGRG00001011263 #16	Adam7 (ENSCGRG00001010547) #17	Adamdec1 (ENSCGRG00001013228) #19	Adam28 (ENSCGRG00001009338) #20	Stc1 (ENSCGRG00001019183) #21	Nkx2-6 (ENSCGRG00001007878) #22	Nkx3-1 (ENSCGRG00001019912) #23	Slc25a37 (ENSCGRG00001008508) #24	Synb (ENSCGRG00001011259)	ENSCGRG00001018845 #25	Loxl2 (ENSCGRG00001000163) #26	R3hcc1 (ENSCGRG00001014977) #27	Chmp7 (ENSCGRG00001021741) #28	Rhobtb2 (ENSCGRG00001023228) #31	Egr3 (ENSCGRG00001009879) #33	Bin3 (ENSCGRG00001014908) #34	Ccar2 (ENSCGRG00001010031) #35	9930012K11Rik (ENSCGRG00001022180) #36	Pdlim2 (ENSCGRG00001018717) #37	Sorbs3 (ENSCGRG00001019180)	Ppp3cc (ENSCGRG00001021761)
Golden Hamster	MODERN SPECIES	642													Adamdec1 (ENSMAUG00000021097) #19	Adam28 (ENSMAUG00000012592) #20	ENSMAUG00000020290 #21	Nkx2-6 (ENSMAUG00000002996) #22	Nkx3-1 (ENSMAUG00000020666) #23	Slc25a37 (ENSMAUG00000013175) #24	ENSMAUG00000012065 #25	Loxl2 (ENSMAUG00000019178) #26	R3hcc1 (ENSMAUG00000016096) #27	Chmp7 (ENSMAUG00000017878) #28	Rhobtb2 (ENSMAUG00000003682) #31	Pebp4 (ENSMAUG00000012682) #32	Egr3 (ENSMAUG00000000747) #33	Bin3 (ENSMAUG00000013983) #34	Ccar2 (ENSMAUG00000011127) #35	9930012K11Rik (ENSMAUG00000021973) #36	Pdlim2 (ENSMAUG00000019610) #37	Sorbs3 (ENSMAUG00000021963)	Ppp3cc (ENSMAUG00000000668)
Murinae	ANCESTRAL SPECIES	16	ENSGT00860000136257	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162427.j	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Mus	ANCESTRAL SPECIES	8	ENSGT00860000136257	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162427.j	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Mus_A	ANCESTRAL SPECIES	12	ENSGT00860000136257	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a.y #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162427.j	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Mus_B	ANCESTRAL SPECIES	11	ENSGT00860000136257	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a.y #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162427.j	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Mus_C	ANCESTRAL SPECIES	20	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b.p	ENSGT00950000182864.a.b.a.y #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00940000163436.n.a	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162427.j	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Steppe mouse	MODERN SPECIES	3084					Cdca2 (ENSMSIG00000023962) #10	Kctd9 (ENSMSIG00000024015) #11	ENSMSIG00000024123 #12	Dock5 (ENSMSIG00000024135) #13	Nefl (ENSMSIG00000024282) #15	ENSMSIG00000024304 #16	Adam7 (ENSMSIG00000024335) #17	Adamdec1 (ENSMSIG00000024360) #19	Adam28 (ENSMSIG00000024389) #20	Stc1 (ENSMSIG00000024577) #21	ENSMSIG00000024592	Nkx2-6 (ENSMSIG00000024600) #22	Nkx3-1 (ENSMSIG00000024609) #23	Slc25a37 (ENSMSIG00000024616) #24	ENSMSIG00000024627	ENSMSIG00000024639 #25	Loxl2 (ENSMSIG00000024664) #26	R3hcc1 (ENSMSIG00000024698) #27	Chmp7 (ENSMSIG00000024716) #28	ENSMSIG00000024730	Tnfrsf10b (ENSMSIG00000024749)	Rhobtb2 (ENSMSIG00000024755) #31	ENSMSIG00000024803	ENSMSIG00000024806
spretus	MODERN SPECIES	5	MGP_SPRETEiJ_G0020335	Pnma2 (MGP_SPRETEiJ_G0020336) #8	Bnip3l (MGP_SPRETEiJ_G0020337)	Ppp2r2a (MGP_SPRETEiJ_G0020338) #7	Ebf2 (MGP_SPRETEiJ_G0020339) #9	Cdca2 (MGP_SPRETEiJ_G0020340) #10	Kctd9 (MGP_SPRETEiJ_G0020341) #11	Gnrh1 (MGP_SPRETEiJ_G0020342) #12	Dock5 (MGP_SPRETEiJ_G0020343) #13	Nefm (MGP_SPRETEiJ_G0020344)	Nefl (MGP_SPRETEiJ_G0020345) #15	Adam7 (MGP_SPRETEiJ_G0020346) #17	Adamdec1 (MGP_SPRETEiJ_G0020347) #19	Adam28 (MGP_SPRETEiJ_G0020348) #20	Stc1 (MGP_SPRETEiJ_G0020349) #21	Nkx2-6 (MGP_SPRETEiJ_G0020350) #22	Nkx3-1 (MGP_SPRETEiJ_G0020351) #23	Slc25a37 (MGP_SPRETEiJ_G0020352) #24	MGP_SPRETEiJ_G0020354	MGP_SPRETEiJ_G0020355	MGP_SPRETEiJ_G0020356 #25	MGP_SPRETEiJ_G0020357 #25	Loxl2 (MGP_SPRETEiJ_G0020358) #26	R3hcc1 (MGP_SPRETEiJ_G0020359) #27	Chmp7 (MGP_SPRETEiJ_G0020360) #28	Tnfrsf10b (MGP_SPRETEiJ_G0020361)	Rhobtb2 (MGP_SPRETEiJ_G0020362) #31	Pebp4 (MGP_SPRETEiJ_G0020363) #32	Egr3 (MGP_SPRETEiJ_G0020364) #33	Bin3 (MGP_SPRETEiJ_G0020365) #34	Ccar2 (MGP_SPRETEiJ_G0020366) #35
Mouse	MODERN SPECIES	5	Dpysl2 (ENSMUSG00000022048)	Pnma2 (ENSMUSG00000046204) #8	Bnip3l (ENSMUSG00000022051)	Ppp2r2a (ENSMUSG00000022052) #7	Ebf2 (ENSMUSG00000022053) #9	Cdca2 (ENSMUSG00000048922) #10	Kctd9 (ENSMUSG00000034327) #11	Gnrh1 (ENSMUSG00000015812) #12	Dock5 (ENSMUSG00000044447) #13	Nefm (ENSMUSG00000022054)	Nefl (ENSMUSG00000022055) #15	Adam7 (ENSMUSG00000022056) #17	Adamdec1 (ENSMUSG00000022057) #19	Adam28 (ENSMUSG00000014725) #20	Stc1 (ENSMUSG00000014813) #21	Nkx2-6 (ENSMUSG00000044186) #22	Nkx3-1 (ENSMUSG00000022061) #23	Slc25a37 (ENSMUSG00000034248) #24	Synb (ENSMUSG00000047977)	Entpd4 (ENSMUSG00000095463) #25	Gm16867 (ENSMUSG00000093954)	Gm27179 (ENSMUSG00000098773)	Entpd4b (ENSMUSG00000022066) #25	Loxl2 (ENSMUSG00000034205) #26	R3hcc1 (ENSMUSG00000034194) #27	Chmp7 (ENSMUSG00000034190) #28	Tnfrsf10b (ENSMUSG00000022074)	Rhobtb2 (ENSMUSG00000022075) #31	Pebp4 (ENSMUSG00000022085) #32	Egr3 (ENSMUSG00000033730) #33	Bin3 (ENSMUSG00000022089) #34
Ryukyu mouse	MODERN SPECIES	5	MGP_CAROLIEiJ_G0019443	Pnma2 (MGP_CAROLIEiJ_G0019444) #8	Bnip3l (MGP_CAROLIEiJ_G0019445)	MGP_CAROLIEiJ_G0019446 #7	Ebf2 (MGP_CAROLIEiJ_G0019447) #9	Cdca2 (MGP_CAROLIEiJ_G0019448) #10	Kctd9 (MGP_CAROLIEiJ_G0019449) #11	Gnrh1 (MGP_CAROLIEiJ_G0019450) #12	Dock5 (MGP_CAROLIEiJ_G0019451) #13	Nefm (MGP_CAROLIEiJ_G0019452)	Nefl (MGP_CAROLIEiJ_G0019453) #15	Adam7 (MGP_CAROLIEiJ_G0019454) #17	Adamdec1 (MGP_CAROLIEiJ_G0019455) #19	Adam28 (MGP_CAROLIEiJ_G0019456) #20	Stc1 (MGP_CAROLIEiJ_G0019457) #21	Nkx2-6 (MGP_CAROLIEiJ_G0019458) #22	Nkx3-1 (MGP_CAROLIEiJ_G0019459) #23	Slc25a37 (MGP_CAROLIEiJ_G0019460) #24	MGP_CAROLIEiJ_G0019461	MGP_CAROLIEiJ_G0019462	MGP_CAROLIEiJ_G0019463	MGP_CAROLIEiJ_G0019464 #25	MGP_CAROLIEiJ_G0019465 #25	Loxl2 (MGP_CAROLIEiJ_G0019466) #26	R3hcc1 (MGP_CAROLIEiJ_G0019467) #27	Chmp7 (MGP_CAROLIEiJ_G0019468) #28	MGP_CAROLIEiJ_G0019469	Rhobtb2 (MGP_CAROLIEiJ_G0019470) #31	Pebp4 (MGP_CAROLIEiJ_G0019471) #32	Egr3 (MGP_CAROLIEiJ_G0019472) #33	Bin3 (MGP_CAROLIEiJ_G0019473) #34
Shrew mouse	MODERN SPECIES	21	Dpysl2 (MGP_PahariEiJ_G0030459)	MGP_PahariEiJ_G0030460	Bnip3l (MGP_PahariEiJ_G0030462)	Ppp2r2a (MGP_PahariEiJ_G0030463) #7	Ebf2 (MGP_PahariEiJ_G0030464) #9	Cdca2 (MGP_PahariEiJ_G0030465) #10	Kctd9 (MGP_PahariEiJ_G0030466) #11	Gnrh1 (MGP_PahariEiJ_G0030467) #12	Dock5 (MGP_PahariEiJ_G0030468) #13	Nefm (MGP_PahariEiJ_G0030469)	Nefl (MGP_PahariEiJ_G0030470) #15	Adam7 (MGP_PahariEiJ_G0030471) #17	Adamdec1 (MGP_PahariEiJ_G0030472) #19	Adam28 (MGP_PahariEiJ_G0030473) #20	Stc1 (MGP_PahariEiJ_G0030474) #21	MGP_PahariEiJ_G0030475 #22	Nkx3-1 (MGP_PahariEiJ_G0030476) #23	Slc25a37 (MGP_PahariEiJ_G0030477) #24	MGP_PahariEiJ_G0030478	MGP_PahariEiJ_G0030479	MGP_PahariEiJ_G0030480	MGP_PahariEiJ_G0030481 #25	MGP_PahariEiJ_G0030482 #25	Loxl2 (MGP_PahariEiJ_G0030483) #26	R3hcc1 (MGP_PahariEiJ_G0030484) #27	Chmp7 (MGP_PahariEiJ_G0030485) #28	MGP_PahariEiJ_G0030486	Rhobtb2 (MGP_PahariEiJ_G0030487) #31	Pebp4 (MGP_PahariEiJ_G0030488) #32	Egr3 (MGP_PahariEiJ_G0030489) #33	Bin3 (MGP_PahariEiJ_G0030490) #34
Rat	MODERN SPECIES	6	Gnrh1 (ENSRNOG00000066847) #12	Kctd9 (ENSRNOG00000012951) #11	Gnrh1 (ENSRNOG00000013433)	Dock5 (ENSRNOG00000024703) #13	LOC120097172 (ENSRNOG00000031532)	Nefl (ENSRNOG00000013658) #15	Nefm (ENSRNOG00000013916) #16	Adam7 (ENSRNOG00000014054) #17	Adamdec1 (ENSRNOG00000030724) #19	Adam28 (ENSRNOG00000014518) #20	ENSRNOG00000063586 #20	AABR07018269.1 (ENSRNOG00000031720)	ENSRNOG00000063939	ENSRNOG00000067366	Stc1 (ENSRNOG00000015075) #21	Nkx2-6 (ENSRNOG00000021910) #22	Nkx3-1 (ENSRNOG00000015477) #23	Slc25a37 (ENSRNOG00000015495) #24	Synb (ENSRNOG00000021823)	Entpd4 (ENSRNOG00000016321) #25	Loxl2 (ENSRNOG00000016758) #26	R3hcc1 (ENSRNOG00000016777) #27	Chmp7 (ENSRNOG00000016939) #28	Tnfrsf10b (ENSRNOG00000038483)	Rhobtb2 (ENSRNOG00000017373) #31	Pebp4 (ENSRNOG00000026247) #32	Egr3 (ENSRNOG00000017828) #33	Bin3 (ENSRNOG00000018023) #34	Ccar2 (ENSRNOG00000018295) #35	C15h8orf58 (ENSRNOG00000008351) #36	Pdlim2 (ENSRNOG00000008543) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	487										Nefl (ENSNGAG00000006739) #15	ENSNGAG00000006331	Adam7 (ENSNGAG00000023201) #17	Adamdec1 (ENSNGAG00000018142) #19	Adam28 (ENSNGAG00000007193) #20	Stc1 (ENSNGAG00000023141) #21	Nkx2-6 (ENSNGAG00000022732) #22	Nkx3-1 (ENSNGAG00000021847) #23	Slc25a37 (ENSNGAG00000016465) #24	ENSNGAG00000004016	ENSNGAG00000020742 #25	Loxl2 (ENSNGAG00000022939) #26	R3hcc1 (ENSNGAG00000016747) #27	Chmp7 (ENSNGAG00000015842) #28	Rhobtb2 (ENSNGAG00000014537) #31	Egr3 (ENSNGAG00000014204) #33	Bin3 (ENSNGAG00000012258) #34	Ccar2 (ENSNGAG00000009598) #35	9930012K11Rik (ENSNGAG00000010379) #36	Pdlim2 (ENSNGAG00000007929) #37	Sorbs3 (ENSNGAG00000015206)	Ppp3cc (ENSNGAG00000013527)
Lesser Egyptian jerboa	MODERN SPECIES	125	Adra1a (ENSJJAG00000008597)	Dpysl2 (ENSJJAG00000021965)	ENSJJAG00000021430	Ppp2r2a (ENSJJAG00000020800) #7	Ebf2 (ENSJJAG00000018635) #9	ENSJJAG00000016051 #10	Kctd9 (ENSJJAG00000014248) #11	Gnrh1 (ENSJJAG00000013753) #12	Dock5 (ENSJJAG00000012658) #13	Nefl (ENSJJAG00000011034) #15	Nefm (ENSJJAG00000018709)	Adam7 (ENSJJAG00000016655) #17	Adamdec1 (ENSJJAG00000015285) #19	Adam28 (ENSJJAG00000014433) #20	Stc1 (ENSJJAG00000013494) #21	Nkx2-6 (ENSJJAG00000013412) #22	Nkx3-1 (ENSJJAG00000013332) #23	ENSJJAG00000012211	Slc25a37 (ENSJJAG00000012106) #24	ENSJJAG00000010447 #25	Loxl2 (ENSJJAG00000009230) #26	R3hcc1 (ENSJJAG00000013075) #27	Chmp7 (ENSJJAG00000012284) #28	ENSJJAG00000011797	Rhobtb2 (ENSJJAG00000010580) #31	Egr3 (ENSJJAG00000010434) #33	Bin3 (ENSJJAG00000010054) #34	Ccar2 (ENSJJAG00000006864) #35	9930012K11Rik (ENSJJAG00000002660) #36	Pdlim2 (ENSJJAG00000022305) #37	Sorbs3 (ENSJJAG00000020896)
Rodentia_A	ANCESTRAL SPECIES	21	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00940000172945	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Sciuridae	ANCESTRAL SPECIES	29	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.j #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000154418.a.b #16	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Marmotini	ANCESTRAL SPECIES	30	ENSGT01030000234522.C.b.e.a.a.b #8	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314.j #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00940000159453.e.b	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Marmotini_b	ANCESTRAL SPECIES	87											ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00940000159453.e.b	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Arctic ground squirrel	MODERN SPECIES	186											ADAM7 (ENSUPAG00010017328) #17	ADAMDEC1 (ENSUPAG00010017356) #19	ADAM28 (ENSUPAG00010017386) #20	ENSUPAG00010017423	STC1 (ENSUPAG00010017427) #21	NKX2-6 (ENSUPAG00010017433) #22	NKX3-1 (ENSUPAG00010017442) #23	SLC25A37 (ENSUPAG00010017448) #24	ENTPD4 (ENSUPAG00010017458) #25	LOXL2 (ENSUPAG00010017498) #26	R3HCC1 (ENSUPAG00010017502) #27	CHMP7 (ENSUPAG00010017507) #28	ENSUPAG00010017525 #29	RHOBTB2 (ENSUPAG00010017538) #31	PEBP4 (ENSUPAG00010017546) #32	EGR3 (ENSUPAG00010017554) #33	BIN3 (ENSUPAG00010017563) #34	CCAR2 (ENSUPAG00010017585) #35	C8orf58 (ENSUPAG00010017613) #36	PDLIM2 (ENSUPAG00010017621) #37	SORBS3 (ENSUPAG00010017635)
Squirrel	MODERN SPECIES	155												ADAM7 (ENSSTOG00000012955) #17	ADAMDEC1 (ENSSTOG00000032677) #19	ADAM28 (ENSSTOG00000006248) #20	STC1 (ENSSTOG00000007507) #21	NKX2-6 (ENSSTOG00000025482) #22	NKX3-1 (ENSSTOG00000029597) #23	SLC25A37 (ENSSTOG00000025533) #24	ENTPD4 (ENSSTOG00000015892) #25	LOXL2 (ENSSTOG00000015878) #26	R3HCC1 (ENSSTOG00000027130) #27	CHMP7 (ENSSTOG00000015867) #28	ENSSTOG00000001440 #29	RHOBTB2 (ENSSTOG00000029109) #31	PEBP4 (ENSSTOG00000032426) #32	EGR3 (ENSSTOG00000021065) #33	BIN3 (ENSSTOG00000011677) #34	CCAR2 (ENSSTOG00000011666) #35	C8orf58 (ENSSTOG00000021866) #36	PDLIM2 (ENSSTOG00000024161) #37	SORBS3 (ENSSTOG00000011660)
Alpin marmot	MODERN SPECIES	61	EBF2 (ENSMMMG00000013647) #9	ENSMMMG00000013653	CDCA2 (ENSMMMG00000013660) #10	KCTD9 (ENSMMMG00000013722) #11	ENSMMMG00000013769	GNRH1 (ENSMMMG00000013776) #12	DOCK5 (ENSMMMG00000013783) #13	ENSMMMG00000013835	NEFL (ENSMMMG00000013840) #15	ENSMMMG00000013849	ADAM7 (ENSMMMG00000013881) #17	ADAMDEC1 (ENSMMMG00000013904) #19	ADAM28 (ENSMMMG00000013926) #20	ENSMMMG00000013954	STC1 (ENSMMMG00000013958) #21	NKX2-6 (ENSMMMG00000013962) #22	SLC25A37 (ENSMMMG00000013971) #24	ENTPD4 (ENSMMMG00000013974) #25	LOXL2 (ENSMMMG00000014011) #26	R3HCC1 (ENSMMMG00000014035) #27	CHMP7 (ENSMMMG00000014044) #28	ENSMMMG00000014054 #29	RHOBTB2 (ENSMMMG00000014066) #31	PEBP4 (ENSMMMG00000014076) #32	EGR3 (ENSMMMG00000014096) #33	BIN3 (ENSMMMG00000014099) #34	CCAR2 (ENSMMMG00000014111) #35	C8orf58 (ENSMMMG00000014146) #36	PDLIM2 (ENSMMMG00000014169) #37	SORBS3 (ENSMMMG00000014188)	PPP3CC (ENSMMMG00000014284)
Eurasian red squirrel	MODERN SPECIES	14	ENSSVLG00005003040	ENSSVLG00005003080 #7	EBF2 (ENSSVLG00005003172) #9	CDCA2 (ENSSVLG00005003275) #10	KCTD9 (ENSSVLG00005003331) #11	GNRH1 (ENSSVLG00005003367) #12	DOCK5 (ENSSVLG00005003397) #13	ENSSVLG00005003428	ENSSVLG00005003443	NEFL (ENSSVLG00005003461) #15	NEFM (ENSSVLG00005003494) #16	ADAM7 (ENSSVLG00005003562) #17	ADAMDEC1 (ENSSVLG00005003660) #19	ADAM28 (ENSSVLG00005003701) #20	STC1 (ENSSVLG00005003730) #21	NKX2-6 (ENSSVLG00005003752) #22	NKX3-1 (ENSSVLG00005003772) #23	SLC25A37 (ENSSVLG00005003790) #24	ENTPD4 (ENSSVLG00005003809) #25	LOXL2 (ENSSVLG00005003840) #26	R3HCC1 (ENSSVLG00005003877) #27	CHMP7 (ENSSVLG00005003902) #28	RHOBTB2 (ENSSVLG00005003947) #31	PEBP4 (ENSSVLG00005003991) #32	ENSSVLG00005004016	BIN3 (ENSSVLG00005004049) #34	CCAR2 (ENSSVLG00005004079) #35	C8orf58 (ENSSVLG00005004115) #36	PDLIM2 (ENSSVLG00005004159) #37	SORBS3 (ENSSVLG00005004211)	ENSSVLG00005004276
Hystricomorpha	ANCESTRAL SPECIES	21	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT00940000172945	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37
Hystricomorpha_a	ANCESTRAL SPECIES	20	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Hystricomorpha_b	ANCESTRAL SPECIES	30	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25	ENSGT00940000155874 #26	ENSGT00530000063711.a #27	ENSGT00720000108860 #28	ENSGT00940000162957 #29	ENSGT00940000158918 #31	ENSGT00940000162387 #32	ENSGT00940000160355 #33	ENSGT00950000182882.B #34	ENSGT00530000063672.b #35	ENSGT00390000000531 #36	ENSGT00940000160418 #37	ENSGT00940000160558
Long-tailed chinchilla	MODERN SPECIES	110	DPYSL2 (ENSCLAG00000015960)	BNIP3L (ENSCLAG00000016223)	PPP2R2A (ENSCLAG00000013984) #7	EBF2 (ENSCLAG00000013500) #9	CDCA2 (ENSCLAG00000011981) #10	KCTD9 (ENSCLAG00000013948) #11	GNRH1 (ENSCLAG00000014234) #12	DOCK5 (ENSCLAG00000015174) #13	NEFL (ENSCLAG00000014935) #15	ENSCLAG00000013799	ADAM7 (ENSCLAG00000013174) #17	ENSCLAG00000015375 #19	ADAM28 (ENSCLAG00000016310) #20	ENSCLAG00000015807	STC1 (ENSCLAG00000014786) #21	NKX2-6 (ENSCLAG00000014720) #22	NKX3-1 (ENSCLAG00000013957) #23	SLC25A37 (ENSCLAG00000014235) #24	ENTPD4 (ENSCLAG00000013899) #25	LOXL2 (ENSCLAG00000016283) #26	R3HCC1 (ENSCLAG00000015556) #27	CHMP7 (ENSCLAG00000015529) #28	ENSCLAG00000013896 #29	RHOBTB2 (ENSCLAG00000014037) #31	PEBP4 (ENSCLAG00000015116) #32	EGR3 (ENSCLAG00000016373) #33	BIN3 (ENSCLAG00000016398) #34	CCAR2 (ENSCLAG00000014299) #35	C8orf58 (ENSCLAG00000014186) #36	ENSCLAG00000014272 #37	SORBS3 (ENSCLAG00000014309)
Degu	MODERN SPECIES	77	ENSODEG00000006781 #7	ENSODEG00000007854	EBF2 (ENSODEG00000007640) #9	ENSODEG00000006905	ENSODEG00000007418 #10	KCTD9 (ENSODEG00000008616) #11	GNRH1 (ENSODEG00000007834) #12	DOCK5 (ENSODEG00000007523) #13	NEFL (ENSODEG00000007183) #15	NEFM (ENSODEG00000008392) #16	ENSODEG00000007521	ADAM7 (ENSODEG00000007547) #17	ADAMDEC1 (ENSODEG00000008034) #19	ADAM28 (ENSODEG00000007875) #20	STC1 (ENSODEG00000007382) #21	NKX2-6 (ENSODEG00000007413) #22	NKX3-1 (ENSODEG00000007004) #23	SLC25A37 (ENSODEG00000007363) #24	ENTPD4 (ENSODEG00000009788) #25	ENSODEG00000009404	LOXL2 (ENSODEG00000006938) #26	R3HCC1 (ENSODEG00000007529) #27	ENSODEG00000019474	ENSODEG00000007294 #28	RHOBTB2 (ENSODEG00000007111) #31	ENSODEG00000008725	EGR3 (ENSODEG00000007442) #33	BIN3 (ENSODEG00000006965) #34	CCAR2 (ENSODEG00000008466) #35	C8orf58 (ENSODEG00000006637) #36	PDLIM2 (ENSODEG00000006028) #37
Naked mole-rat female	MODERN SPECIES	25	ENSHGLG00000010256	CDCA2 (ENSHGLG00000037894) #10	ENSHGLG00000036572	ENSHGLG00000018824 #11	GNRH1 (ENSHGLG00000017902) #12	DOCK5 (ENSHGLG00000017514) #13	ENSHGLG00000050046	NEFL (ENSHGLG00000017653) #15	ENSHGLG00000019352	ENSHGLG00000036278	ADAM7 (ENSHGLG00000017673) #17	ADAMDEC1 (ENSHGLG00000011872) #19	ADAM28 (ENSHGLG00000018858) #20	ENSHGLG00000040240	STC1 (ENSHGLG00000040196) #21	NKX2-6 (ENSHGLG00000014624) #22	ENSHGLG00000044875	NKX3-1 (ENSHGLG00000049073) #23	SLC25A37 (ENSHGLG00000036264) #24	ENSHGLG00000032907	ENSHGLG00000010644 #25	LOXL2 (ENSHGLG00000012019) #26	R3HCC1 (ENSHGLG00000010517) #27	ENSHGLG00000009513 #28	ENSHGLG00000032756 #29	RHOBTB2 (ENSHGLG00000016441) #31	ENSHGLG00000049596	PEBP4 (ENSHGLG00000042512) #32	EGR3 (ENSHGLG00000040205) #33	BIN3 (ENSHGLG00000014664) #34	CCAR2 (ENSHGLG00000015483) #35
Lagomorpha	ANCESTRAL SPECIES	60	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a #7	ENSGT00950000182859.A.a.a.b #9	ENSGT00940000154352.A #10	ENSGT00940000154314 #11	ENSGT00390000008225 #12	ENSGT00940000157734 #13	ENSGT00940000156208 #15	ENSGT00940000161685.A.a	ENSGT00940000161406 #17	ENSGT00900000141143 #19	ENSGT00940000156716 #20	ENSGT00390000005989.b #21	ENSGT00940000162737 #22	ENSGT00940000160930 #23	ENSGT00940000158607 #24	ENSGT01100000263540.B.d #25
Rabbit	MODERN SPECIES	11	PPP2R2A (ENSOCUG00000027088) #7	EBF2 (ENSOCUG00000011972) #9	CDCA2 (ENSOCUG00000014109) #10	KCTD9 (ENSOCUG00000014099) #11	GNRH1 (ENSOCUG00000014093) #12	DOCK5 (ENSOCUG00000014056) #13	NEFL (ENSOCUG00000023836) #15	ENSOCUG00000021430	ADAM7 (ENSOCUG00000012104) #17	ADAMDEC1 (ENSOCUG00000001597) #19	ADAM28 (ENSOCUG00000004176) #20	ENSOCUG00000032289	ENSOCUG00000037834	ENSOCUG00000033833	STC1 (ENSOCUG00000005708) #21	NKX2-6 (ENSOCUG00000004296) #22	NKX3-1 (ENSOCUG00000004294) #23	SLC25A37 (ENSOCUG00000004114) #24	ENTPD4 (ENSOCUG00000004102) #25	DDX60 (ENSOCUG00000006355)	ENSOCUG00000029856	PALLD (ENSOCUG00000004900)	CBR4 (ENSOCUG00000006446)	SH3RF1 (ENSOCUG00000003098)	ENSOCUG00000038117	ENSOCUG00000031550	NEK1 (ENSOCUG00000016756)	CLCN3 (ENSOCUG00000006220)	HPF1 (ENSOCUG00000026923)	ENSOCUG00000036380	MFAP3L (ENSOCUG00000011514)
Pika	MODERN SPECIES	1500																ENSOPRG00000003185 #22	NKX3-1 (ENSOPRG00000003179) #23	ENSOPRG00000018999	ENSOPRG00000018477	SLC25A37 (ENSOPRG00000003130) #24	ENSOPRG00000003097 #25
Tree shrew	MODERN SPECIES	4268																NKX2-6 (ENSTBEG00000017101) #22