Murinae	ANCESTRAL SPECIES	11	ENSGT00940000160784 #7	ENSGT00940000163241 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a	ENSGT00390000012818.o.a.a.a.b ##23	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898 #27	ENSGT00390000008827 #28	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Rat	MODERN SPECIES	4	Cyb5r1 (ENSRNOG00000003973) #7	Mgat4e-like (ENSRNOG00000027702) #8	Tmem183a (ENSRNOG00000003594) #9	Ppfia4 (ENSRNOG00000003494) #10	Myog (ENSRNOG00000030743) #11	Adora1 (ENSRNOG00000003442) #12	Mybph (ENSRNOG00000003336) #13	Chi3l1 (ENSRNOG00000053272) #14	Chit1 (ENSRNOG00000028072) #15	Btg2 (ENSRNOG00000003300) #16	Fmod (ENSRNOG00000003183) #17	Prelp (ENSRNOG00000003120) #18	Optc (ENSRNOG00000003059) #19	Atp2b4 (ENSRNOG00000003031) #20	Lax1 (ENSRNOG00000028250) #21	Zbed6 (ENSRNOG00000053210) #22	Snrpe (ENSRNOG00000067587) #23	LOC498231 (ENSRNOG00000029418) #24	Sox13 (ENSRNOG00000028353) #25	Etnk2 (ENSRNOG00000028368) #26	Ren (ENSRNOG00000002937) #27	Kiss1 (ENSRNOG00000047481) #28	Golt1a (ENSRNOG00000002936) #29	Plekha6 (ENSRNOG00000002907) #30	Ppp1r15b (ENSRNOG00000028493) #31	Pik3c2b (ENSRNOG00000029938) #32	Mdm4 (ENSRNOG00000009696) #33	Lrrn2 (ENSRNOG00000009691) #34	Nfasc (ENSRNOG00000030515) #35	Cntn2 (ENSRNOG00000009033) #36	Tmem81 (ENSRNOG00000028752) #37
Mus	ANCESTRAL SPECIES	5	ENSGT00940000160784 #7	ENSGT00940000163241 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a	ENSGT00390000012818.o.a.a.a.b ##23	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898 #27	ENSGT00390000014507.b.a.b #29	ENSGT00390000008827 #28	ENSGT00390000014507.b.a.a #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000160784 #7	ENSGT00940000163241 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a	ENSGT00390000012818.o.a.a.a.b ##23	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898 #27	ENSGT00390000014507.b.a.b #29	ENSGT00390000008827 #28	ENSGT00390000014507.b.a.a #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000160784 #7	ENSGT00940000163241 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a	ENSGT00390000012818.o.a.a.a.b ##23	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898 #27	ENSGT00390000008827 #28	ENSGT00390000014507.b.a.a #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a.qb #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000160784 #7	ENSGT00940000163241 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a	ENSGT00390000012818.o.a.a.a.b ##23	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898 #27	ENSGT00390000008827 #28	ENSGT00390000014507.b.a.a #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a.qb #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
spretus	DUPLICATION
spretus	MODERN SPECIES		Cyb5r1 (MGP_SPRETEiJ_G0015428) #7	Mgat4f (MGP_SPRETEiJ_G0015427) #8	Tmem183a (MGP_SPRETEiJ_G0015426) #9	Ppfia4 (MGP_SPRETEiJ_G0015425) #10	Myog (MGP_SPRETEiJ_G0015424) #11	Adora1 (MGP_SPRETEiJ_G0015423) #12	Mybph (MGP_SPRETEiJ_G0015422) #13	Chil1 (MGP_SPRETEiJ_G0015421) #14	Chit1 (MGP_SPRETEiJ_G0015420) #15	Btg2 (MGP_SPRETEiJ_G0015419) #16	Fmod (MGP_SPRETEiJ_G0015418) #17	Prelp (MGP_SPRETEiJ_G0015417) #18	MGP_SPRETEiJ_G0015416 #19	Atp2b4 (MGP_SPRETEiJ_G0015415) #20	Lax1 (MGP_SPRETEiJ_G0015414) #21	MGP_SPRETEiJ_G0015413 #22	MGP_SPRETEiJ_G0015412 #22	Zc3h11a (MGP_SPRETEiJ_G0015411)	Snrpe (MGP_SPRETEiJ_G0015410) ##23	Sox13 (MGP_SPRETEiJ_G0015409) #25	Etnk2 (MGP_SPRETEiJ_G0015408) #26	MGP_SPRETEiJ_G0015407 #29	MGP_SPRETEiJ_G0015406 #28	Golt1a (MGP_SPRETEiJ_G0015405) #29	Plekha6 (MGP_SPRETEiJ_G0015403) #30	Ppp1r15b (MGP_SPRETEiJ_G0015402) #31	Pik3c2b (MGP_SPRETEiJ_G0015401) #32	Mdm4 (MGP_SPRETEiJ_G0015400) #33	Lrrn2 (MGP_SPRETEiJ_G0015399) #34	Nfasc (MGP_SPRETEiJ_G0015398) #35	Cntn2 (MGP_SPRETEiJ_G0015397) #36
spretus	MODERN SPECIES		Mgat4f (MGP_SPRETEiJ_G0015427) #8	Tmem183a (MGP_SPRETEiJ_G0015426) #9	Ppfia4 (MGP_SPRETEiJ_G0015425) #10	Myog (MGP_SPRETEiJ_G0015424) #11	Adora1 (MGP_SPRETEiJ_G0015423) #12	Mybph (MGP_SPRETEiJ_G0015422) #13	Chil1 (MGP_SPRETEiJ_G0015421) #14	Chit1 (MGP_SPRETEiJ_G0015420) #15	Btg2 (MGP_SPRETEiJ_G0015419) #16	Fmod (MGP_SPRETEiJ_G0015418) #17	Prelp (MGP_SPRETEiJ_G0015417) #18	MGP_SPRETEiJ_G0015416 #19	Atp2b4 (MGP_SPRETEiJ_G0015415) #20	Lax1 (MGP_SPRETEiJ_G0015414) #21	MGP_SPRETEiJ_G0015413 #22	MGP_SPRETEiJ_G0015412 #22	Zc3h11a (MGP_SPRETEiJ_G0015411)	Snrpe (MGP_SPRETEiJ_G0015410) ##23	Sox13 (MGP_SPRETEiJ_G0015409) #25	Etnk2 (MGP_SPRETEiJ_G0015408) #26	MGP_SPRETEiJ_G0015407 #29	MGP_SPRETEiJ_G0015406 #28	Golt1a (MGP_SPRETEiJ_G0015405) #29	Plekha6 (MGP_SPRETEiJ_G0015403) #30	Ppp1r15b (MGP_SPRETEiJ_G0015402) #31	Pik3c2b (MGP_SPRETEiJ_G0015401) #32	Mdm4 (MGP_SPRETEiJ_G0015400) #33	Lrrn2 (MGP_SPRETEiJ_G0015399) #34	Nfasc (MGP_SPRETEiJ_G0015398) #35	Cntn2 (MGP_SPRETEiJ_G0015397) #36	Tmem81 (MGP_SPRETEiJ_G0015396) #37
Steppe mouse	MODERN SPECIES	3299	ENSMSIG00000017789 #9	Mgat4f (ENSMSIG00000017814) #8	Ppfia4 (ENSMSIG00000017850) #10	Myog (ENSMSIG00000018017) #11	Adora1 (ENSMSIG00000018036) #12	Mybph (ENSMSIG00000018048) #13	Chil1 (ENSMSIG00000018094) #14	Chit1 (ENSMSIG00000018191) #15	ENSMSIG00000018348	Btg2 (ENSMSIG00000018371) #16	Fmod (ENSMSIG00000018385) #17	Prelp (ENSMSIG00000018392) #18	Optc (ENSMSIG00000018410) #19	Atp2b4 (ENSMSIG00000018529) #20	Lax1 (ENSMSIG00000018697) #21	Zbed6 (ENSMSIG00000018721) #22	Zc3h11a (ENSMSIG00000018739)	Snrpe (ENSMSIG00000018783) ##23	Sox13 (ENSMSIG00000018829) #25	ENSMSIG00000018952 #26
Mouse	MODERN SPECIES		Cyb5r1 (ENSMUSG00000026456) #7	Mgat4f (ENSMUSG00000050526) #8	Tmem183a (ENSMUSG00000042305) #9	Ppfia4 (ENSMUSG00000026458) #10	Myog (ENSMUSG00000026459) #11	Adora1 (ENSMUSG00000042429) #12	Mybph (ENSMUSG00000042451) #13	Chil1 (ENSMUSG00000064246) #14	Chit1 (ENSMUSG00000026450) #15	Btg2 (ENSMUSG00000020423) #16	Fmod (ENSMUSG00000041559) #17	Prelp (ENSMUSG00000041577) #18	Optc (ENSMUSG00000010311) #19	Atp2b4 (ENSMUSG00000026463) #20	Lax1 (ENSMUSG00000051998) #21	Zbed6 (ENSMUSG00000094410) #22	Zc3h11a (ENSMUSG00000102976)	Snrpe (ENSMUSG00000090553) ##23	Sox13 (ENSMUSG00000070643) #25	Etnk2 (ENSMUSG00000070644) #26	Ren1 (ENSMUSG00000070645) #27	Kiss1 (ENSMUSG00000116158) #28	Gm28040 (ENSMUSG00000098306)	Gm28040 (ENSMUSG00000115958) #28	Golt1a (ENSMUSG00000103421) #29	Plekha6 (ENSMUSG00000041757) #30	Ppp1r15b (ENSMUSG00000046062) #31	Pik3c2b (ENSMUSG00000026447) #32	Mdm4 (ENSMUSG00000054387) #33	Lrrn2 (ENSMUSG00000026443) #34	Nfasc (ENSMUSG00000026442) #35
Ryukyu mouse	DUPLICATION
Ryukyu mouse	MODERN SPECIES		Mgat4f (MGP_CAROLIEiJ_G0014620) #8	Tmem183a (MGP_CAROLIEiJ_G0014619) #9	Ppfia4 (MGP_CAROLIEiJ_G0014618) #10	Myog (MGP_CAROLIEiJ_G0014617) #11	Adora1 (MGP_CAROLIEiJ_G0014616) #12	Mybph (MGP_CAROLIEiJ_G0014615) #13	Chil1 (MGP_CAROLIEiJ_G0014614) #14	Chit1 (MGP_CAROLIEiJ_G0014613) #15	Btg2 (MGP_CAROLIEiJ_G0014612) #16	Fmod (MGP_CAROLIEiJ_G0014611) #17	Prelp (MGP_CAROLIEiJ_G0014610) #18	Optc (MGP_CAROLIEiJ_G0014609) #19	Atp2b4 (MGP_CAROLIEiJ_G0014608) #20	Lax1 (MGP_CAROLIEiJ_G0014607) #21	MGP_CAROLIEiJ_G0014606 #22	MGP_CAROLIEiJ_G0014605 #22	Zc3h11a (MGP_CAROLIEiJ_G0014604)	Snrpe (MGP_CAROLIEiJ_G0014603) ##23	Sox13 (MGP_CAROLIEiJ_G0014602) #25	Etnk2 (MGP_CAROLIEiJ_G0014601) #26	Ren1 (MGP_CAROLIEiJ_G0014600) #27	MGP_CAROLIEiJ_G0014599 #29	MGP_CAROLIEiJ_G0014598 #28	Golt1a (MGP_CAROLIEiJ_G0014597) #29	Plekha6 (MGP_CAROLIEiJ_G0014596) #30	Ppp1r15b (MGP_CAROLIEiJ_G0014595) #31	Pik3c2b (MGP_CAROLIEiJ_G0014594) #32	Mdm4 (MGP_CAROLIEiJ_G0014593) #33	Lrrn2 (MGP_CAROLIEiJ_G0014592) #34	Nfasc (MGP_CAROLIEiJ_G0014591) #35	Cntn2 (MGP_CAROLIEiJ_G0014590) #36
Ryukyu mouse	MODERN SPECIES		Cyb5r1 (MGP_CAROLIEiJ_G0014621) #7	Mgat4f (MGP_CAROLIEiJ_G0014620) #8	Tmem183a (MGP_CAROLIEiJ_G0014619) #9	Ppfia4 (MGP_CAROLIEiJ_G0014618) #10	Myog (MGP_CAROLIEiJ_G0014617) #11	Adora1 (MGP_CAROLIEiJ_G0014616) #12	Mybph (MGP_CAROLIEiJ_G0014615) #13	Chil1 (MGP_CAROLIEiJ_G0014614) #14	Chit1 (MGP_CAROLIEiJ_G0014613) #15	Btg2 (MGP_CAROLIEiJ_G0014612) #16	Fmod (MGP_CAROLIEiJ_G0014611) #17	Prelp (MGP_CAROLIEiJ_G0014610) #18	Optc (MGP_CAROLIEiJ_G0014609) #19	Atp2b4 (MGP_CAROLIEiJ_G0014608) #20	Lax1 (MGP_CAROLIEiJ_G0014607) #21	MGP_CAROLIEiJ_G0014606 #22	MGP_CAROLIEiJ_G0014605 #22	Zc3h11a (MGP_CAROLIEiJ_G0014604)	Snrpe (MGP_CAROLIEiJ_G0014603) ##23	Sox13 (MGP_CAROLIEiJ_G0014602) #25	Etnk2 (MGP_CAROLIEiJ_G0014601) #26	Ren1 (MGP_CAROLIEiJ_G0014600) #27	MGP_CAROLIEiJ_G0014599 #29	MGP_CAROLIEiJ_G0014598 #28	Golt1a (MGP_CAROLIEiJ_G0014597) #29	Plekha6 (MGP_CAROLIEiJ_G0014596) #30	Ppp1r15b (MGP_CAROLIEiJ_G0014595) #31	Pik3c2b (MGP_CAROLIEiJ_G0014594) #32	Mdm4 (MGP_CAROLIEiJ_G0014593) #33	Lrrn2 (MGP_CAROLIEiJ_G0014592) #34	Nfasc (MGP_CAROLIEiJ_G0014591) #35
Shrew mouse	DUPLICATION
Shrew mouse	MODERN SPECIES	18	Mgat4f (MGP_PahariEiJ_G0027856) #8	Tmem183a (MGP_PahariEiJ_G0027855) #9	Ppfia4 (MGP_PahariEiJ_G0027854) #10	Myog (MGP_PahariEiJ_G0027853) #11	Adora1 (MGP_PahariEiJ_G0027852) #12	Mybph (MGP_PahariEiJ_G0027851) #13	Chil1 (MGP_PahariEiJ_G0027850) #14	Chit1 (MGP_PahariEiJ_G0027849) #15	Btg2 (MGP_PahariEiJ_G0027848) #16	Fmod (MGP_PahariEiJ_G0027847) #17	Prelp (MGP_PahariEiJ_G0027846) #18	Optc (MGP_PahariEiJ_G0027845) #19	MGP_PahariEiJ_G0027844 #20	Lax1 (MGP_PahariEiJ_G0027843) #21	MGP_PahariEiJ_G0027842 #22	MGP_PahariEiJ_G0027841 #22	Zc3h11a (MGP_PahariEiJ_G0027840)	Snrpe (MGP_PahariEiJ_G0027839) ##23	Sox13 (MGP_PahariEiJ_G0027838) #25	Etnk2 (MGP_PahariEiJ_G0027837) #26	Ren1 (MGP_PahariEiJ_G0027836) #27	Golt1a (MGP_PahariEiJ_G0027835) #29	MGP_PahariEiJ_G0027834 #29	MGP_PahariEiJ_G0027833 #28	Plekha6 (MGP_PahariEiJ_G0027832) #30	Ppp1r15b (MGP_PahariEiJ_G0027831) #31	Pik3c2b (MGP_PahariEiJ_G0027830) #32	Mdm4 (MGP_PahariEiJ_G0027829) #33	Lrrn2 (MGP_PahariEiJ_G0027828) #34	Nfasc (MGP_PahariEiJ_G0027827) #35	Cntn2 (MGP_PahariEiJ_G0027826) #36
Shrew mouse	MODERN SPECIES	18	Cyb5r1 (MGP_PahariEiJ_G0027857) #7	Mgat4f (MGP_PahariEiJ_G0027856) #8	Tmem183a (MGP_PahariEiJ_G0027855) #9	Ppfia4 (MGP_PahariEiJ_G0027854) #10	Myog (MGP_PahariEiJ_G0027853) #11	Adora1 (MGP_PahariEiJ_G0027852) #12	Mybph (MGP_PahariEiJ_G0027851) #13	Chil1 (MGP_PahariEiJ_G0027850) #14	Chit1 (MGP_PahariEiJ_G0027849) #15	Btg2 (MGP_PahariEiJ_G0027848) #16	Fmod (MGP_PahariEiJ_G0027847) #17	Prelp (MGP_PahariEiJ_G0027846) #18	Optc (MGP_PahariEiJ_G0027845) #19	MGP_PahariEiJ_G0027844 #20	Lax1 (MGP_PahariEiJ_G0027843) #21	MGP_PahariEiJ_G0027842 #22	MGP_PahariEiJ_G0027841 #22	Zc3h11a (MGP_PahariEiJ_G0027840)	Snrpe (MGP_PahariEiJ_G0027839) ##23	Sox13 (MGP_PahariEiJ_G0027838) #25	Etnk2 (MGP_PahariEiJ_G0027837) #26	Ren1 (MGP_PahariEiJ_G0027836) #27	Golt1a (MGP_PahariEiJ_G0027835) #29	MGP_PahariEiJ_G0027834 #29	MGP_PahariEiJ_G0027833 #28	Plekha6 (MGP_PahariEiJ_G0027832) #30	Ppp1r15b (MGP_PahariEiJ_G0027831) #31	Pik3c2b (MGP_PahariEiJ_G0027830) #32	Mdm4 (MGP_PahariEiJ_G0027829) #33	Lrrn2 (MGP_PahariEiJ_G0027828) #34	Nfasc (MGP_PahariEiJ_G0027827) #35