Rodentia	ANCESTRAL SPECIES		ENSGT00940000163241 #8	ENSGT00940000163962	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193	ENSGT00390000006349
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000160784	ENSGT00940000163241 #8	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193	ENSGT00390000006349
Myomorpha	ANCESTRAL SPECIES	16	ENSGT00940000160784	ENSGT00940000163241 #8	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193	ENSGT00390000006349
Muroidea	ANCESTRAL SPECIES	9	ENSGT00940000160784	ENSGT00940000163241 #8	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193	ENSGT00390000006349
Muroidea_A	ANCESTRAL SPECIES	12	ENSGT00940000160784	ENSGT00940000163241 #8	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193	ENSGT00390000006349
Murinae	ANCESTRAL SPECIES	11	ENSGT00940000160784	ENSGT00940000163241 #8	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193	ENSGT00390000006349
Mus	ANCESTRAL SPECIES	5	ENSGT00940000160784	ENSGT00940000163241 #8	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000014507.b.a.b	ENSGT00390000008827	ENSGT00390000014507.b.a.a	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000160784	ENSGT00940000163241 #8	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000014507.b.a.b	ENSGT00390000008827	ENSGT00390000014507.b.a.a	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000160784	ENSGT00940000163241 #8	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b.a.a	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a.qb	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193	ENSGT00390000006349
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000160784	ENSGT00940000163241 #8	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b.a.a	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a.qb	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193	ENSGT00390000006349
Steppe mouse	MODERN SPECIES	3299	ENSMSIG00000017789 #7	Mgat4f (ENSMSIG00000017814) #8	Ppfia4 (ENSMSIG00000017850) #9	Myog (ENSMSIG00000018017) #10	Adora1 (ENSMSIG00000018036) #11	Mybph (ENSMSIG00000018048) #12	Chil1 (ENSMSIG00000018094) #13	Chit1 (ENSMSIG00000018191) #14	ENSMSIG00000018348 #15	Btg2 (ENSMSIG00000018371) #16	Fmod (ENSMSIG00000018385) #17	Prelp (ENSMSIG00000018392) #18	Optc (ENSMSIG00000018410) #19	Atp2b4 (ENSMSIG00000018529) #20	Lax1 (ENSMSIG00000018697) #21	Zbed6 (ENSMSIG00000018721) #22	Zc3h11a (ENSMSIG00000018739) #23	Snrpe (ENSMSIG00000018783) #24	Sox13 (ENSMSIG00000018829) #25	ENSMSIG00000018952 #26
spretus	DUPLICATION
spretus	MODERN SPECIES		Cyb5r1 (MGP_SPRETEiJ_G0015428)	Mgat4f (MGP_SPRETEiJ_G0015427) #8	Tmem183a (MGP_SPRETEiJ_G0015426) #7	Ppfia4 (MGP_SPRETEiJ_G0015425) #9	Myog (MGP_SPRETEiJ_G0015424) #10	Adora1 (MGP_SPRETEiJ_G0015423) #11	Mybph (MGP_SPRETEiJ_G0015422) #12	Chil1 (MGP_SPRETEiJ_G0015421) #13	Chit1 (MGP_SPRETEiJ_G0015420) #14	Btg2 (MGP_SPRETEiJ_G0015419) #16	Fmod (MGP_SPRETEiJ_G0015418) #17	Prelp (MGP_SPRETEiJ_G0015417) #18	MGP_SPRETEiJ_G0015416 #19	Atp2b4 (MGP_SPRETEiJ_G0015415) #20	Lax1 (MGP_SPRETEiJ_G0015414) #21	MGP_SPRETEiJ_G0015413 #22	MGP_SPRETEiJ_G0015412 #22	Zc3h11a (MGP_SPRETEiJ_G0015411) #23	Snrpe (MGP_SPRETEiJ_G0015410) #24	Sox13 (MGP_SPRETEiJ_G0015409) #25	Etnk2 (MGP_SPRETEiJ_G0015408) #26	MGP_SPRETEiJ_G0015407	MGP_SPRETEiJ_G0015406	Golt1a (MGP_SPRETEiJ_G0015405)	Plekha6 (MGP_SPRETEiJ_G0015403)	Ppp1r15b (MGP_SPRETEiJ_G0015402)	Pik3c2b (MGP_SPRETEiJ_G0015401)	Mdm4 (MGP_SPRETEiJ_G0015400)	Lrrn2 (MGP_SPRETEiJ_G0015399)	Nfasc (MGP_SPRETEiJ_G0015398)	Cntn2 (MGP_SPRETEiJ_G0015397)
spretus	MODERN SPECIES		Mgat4f (MGP_SPRETEiJ_G0015427) #8	Tmem183a (MGP_SPRETEiJ_G0015426) #7	Ppfia4 (MGP_SPRETEiJ_G0015425) #9	Myog (MGP_SPRETEiJ_G0015424) #10	Adora1 (MGP_SPRETEiJ_G0015423) #11	Mybph (MGP_SPRETEiJ_G0015422) #12	Chil1 (MGP_SPRETEiJ_G0015421) #13	Chit1 (MGP_SPRETEiJ_G0015420) #14	Btg2 (MGP_SPRETEiJ_G0015419) #16	Fmod (MGP_SPRETEiJ_G0015418) #17	Prelp (MGP_SPRETEiJ_G0015417) #18	MGP_SPRETEiJ_G0015416 #19	Atp2b4 (MGP_SPRETEiJ_G0015415) #20	Lax1 (MGP_SPRETEiJ_G0015414) #21	MGP_SPRETEiJ_G0015413 #22	MGP_SPRETEiJ_G0015412 #22	Zc3h11a (MGP_SPRETEiJ_G0015411) #23	Snrpe (MGP_SPRETEiJ_G0015410) #24	Sox13 (MGP_SPRETEiJ_G0015409) #25	Etnk2 (MGP_SPRETEiJ_G0015408) #26	MGP_SPRETEiJ_G0015407	MGP_SPRETEiJ_G0015406	Golt1a (MGP_SPRETEiJ_G0015405)	Plekha6 (MGP_SPRETEiJ_G0015403)	Ppp1r15b (MGP_SPRETEiJ_G0015402)	Pik3c2b (MGP_SPRETEiJ_G0015401)	Mdm4 (MGP_SPRETEiJ_G0015400)	Lrrn2 (MGP_SPRETEiJ_G0015399)	Nfasc (MGP_SPRETEiJ_G0015398)	Cntn2 (MGP_SPRETEiJ_G0015397)	Tmem81 (MGP_SPRETEiJ_G0015396)
Mouse	MODERN SPECIES		Cyb5r1 (ENSMUSG00000026456)	Mgat4f (ENSMUSG00000050526) #8	Tmem183a (ENSMUSG00000042305) #7	Ppfia4 (ENSMUSG00000026458) #9	Myog (ENSMUSG00000026459) #10	Adora1 (ENSMUSG00000042429) #11	Mybph (ENSMUSG00000042451) #12	Chil1 (ENSMUSG00000064246) #13	Chit1 (ENSMUSG00000026450) #14	Btg2 (ENSMUSG00000020423) #16	Fmod (ENSMUSG00000041559) #17	Prelp (ENSMUSG00000041577) #18	Optc (ENSMUSG00000010311) #19	Atp2b4 (ENSMUSG00000026463) #20	Lax1 (ENSMUSG00000051998) #21	Zbed6 (ENSMUSG00000094410) #22	Zc3h11a (ENSMUSG00000102976) #23	Snrpe (ENSMUSG00000090553) #24	Sox13 (ENSMUSG00000070643) #25	Etnk2 (ENSMUSG00000070644) #26	Ren1 (ENSMUSG00000070645)	Kiss1 (ENSMUSG00000116158)	Gm28040 (ENSMUSG00000098306)	Gm28040 (ENSMUSG00000115958)	Golt1a (ENSMUSG00000103421)	Plekha6 (ENSMUSG00000041757)	Ppp1r15b (ENSMUSG00000046062)	Pik3c2b (ENSMUSG00000026447)	Mdm4 (ENSMUSG00000054387)	Lrrn2 (ENSMUSG00000026443)	Nfasc (ENSMUSG00000026442)
Ryukyu mouse	DUPLICATION
Ryukyu mouse	MODERN SPECIES		Mgat4f (MGP_CAROLIEiJ_G0014620) #8	Tmem183a (MGP_CAROLIEiJ_G0014619) #7	Ppfia4 (MGP_CAROLIEiJ_G0014618) #9	Myog (MGP_CAROLIEiJ_G0014617) #10	Adora1 (MGP_CAROLIEiJ_G0014616) #11	Mybph (MGP_CAROLIEiJ_G0014615) #12	Chil1 (MGP_CAROLIEiJ_G0014614) #13	Chit1 (MGP_CAROLIEiJ_G0014613) #14	Btg2 (MGP_CAROLIEiJ_G0014612) #16	Fmod (MGP_CAROLIEiJ_G0014611) #17	Prelp (MGP_CAROLIEiJ_G0014610) #18	Optc (MGP_CAROLIEiJ_G0014609) #19	Atp2b4 (MGP_CAROLIEiJ_G0014608) #20	Lax1 (MGP_CAROLIEiJ_G0014607) #21	MGP_CAROLIEiJ_G0014606 #22	MGP_CAROLIEiJ_G0014605 #22	Zc3h11a (MGP_CAROLIEiJ_G0014604) #23	Snrpe (MGP_CAROLIEiJ_G0014603) #24	Sox13 (MGP_CAROLIEiJ_G0014602) #25	Etnk2 (MGP_CAROLIEiJ_G0014601) #26	Ren1 (MGP_CAROLIEiJ_G0014600)	MGP_CAROLIEiJ_G0014599	MGP_CAROLIEiJ_G0014598	Golt1a (MGP_CAROLIEiJ_G0014597)	Plekha6 (MGP_CAROLIEiJ_G0014596)	Ppp1r15b (MGP_CAROLIEiJ_G0014595)	Pik3c2b (MGP_CAROLIEiJ_G0014594)	Mdm4 (MGP_CAROLIEiJ_G0014593)	Lrrn2 (MGP_CAROLIEiJ_G0014592)	Nfasc (MGP_CAROLIEiJ_G0014591)	Cntn2 (MGP_CAROLIEiJ_G0014590)
Ryukyu mouse	MODERN SPECIES		Cyb5r1 (MGP_CAROLIEiJ_G0014621)	Mgat4f (MGP_CAROLIEiJ_G0014620) #8	Tmem183a (MGP_CAROLIEiJ_G0014619) #7	Ppfia4 (MGP_CAROLIEiJ_G0014618) #9	Myog (MGP_CAROLIEiJ_G0014617) #10	Adora1 (MGP_CAROLIEiJ_G0014616) #11	Mybph (MGP_CAROLIEiJ_G0014615) #12	Chil1 (MGP_CAROLIEiJ_G0014614) #13	Chit1 (MGP_CAROLIEiJ_G0014613) #14	Btg2 (MGP_CAROLIEiJ_G0014612) #16	Fmod (MGP_CAROLIEiJ_G0014611) #17	Prelp (MGP_CAROLIEiJ_G0014610) #18	Optc (MGP_CAROLIEiJ_G0014609) #19	Atp2b4 (MGP_CAROLIEiJ_G0014608) #20	Lax1 (MGP_CAROLIEiJ_G0014607) #21	MGP_CAROLIEiJ_G0014606 #22	MGP_CAROLIEiJ_G0014605 #22	Zc3h11a (MGP_CAROLIEiJ_G0014604) #23	Snrpe (MGP_CAROLIEiJ_G0014603) #24	Sox13 (MGP_CAROLIEiJ_G0014602) #25	Etnk2 (MGP_CAROLIEiJ_G0014601) #26	Ren1 (MGP_CAROLIEiJ_G0014600)	MGP_CAROLIEiJ_G0014599	MGP_CAROLIEiJ_G0014598	Golt1a (MGP_CAROLIEiJ_G0014597)	Plekha6 (MGP_CAROLIEiJ_G0014596)	Ppp1r15b (MGP_CAROLIEiJ_G0014595)	Pik3c2b (MGP_CAROLIEiJ_G0014594)	Mdm4 (MGP_CAROLIEiJ_G0014593)	Lrrn2 (MGP_CAROLIEiJ_G0014592)	Nfasc (MGP_CAROLIEiJ_G0014591)
Shrew mouse	DUPLICATION
Shrew mouse	MODERN SPECIES	18	Mgat4f (MGP_PahariEiJ_G0027856) #8	Tmem183a (MGP_PahariEiJ_G0027855) #7	Ppfia4 (MGP_PahariEiJ_G0027854) #9	Myog (MGP_PahariEiJ_G0027853) #10	Adora1 (MGP_PahariEiJ_G0027852) #11	Mybph (MGP_PahariEiJ_G0027851) #12	Chil1 (MGP_PahariEiJ_G0027850) #13	Chit1 (MGP_PahariEiJ_G0027849) #14	Btg2 (MGP_PahariEiJ_G0027848) #16	Fmod (MGP_PahariEiJ_G0027847) #17	Prelp (MGP_PahariEiJ_G0027846) #18	Optc (MGP_PahariEiJ_G0027845) #19	MGP_PahariEiJ_G0027844 #20	Lax1 (MGP_PahariEiJ_G0027843) #21	MGP_PahariEiJ_G0027842 #22	MGP_PahariEiJ_G0027841 #22	Zc3h11a (MGP_PahariEiJ_G0027840) #23	Snrpe (MGP_PahariEiJ_G0027839) #24	Sox13 (MGP_PahariEiJ_G0027838) #25	Etnk2 (MGP_PahariEiJ_G0027837) #26	Ren1 (MGP_PahariEiJ_G0027836)	Golt1a (MGP_PahariEiJ_G0027835)	MGP_PahariEiJ_G0027834	MGP_PahariEiJ_G0027833	Plekha6 (MGP_PahariEiJ_G0027832)	Ppp1r15b (MGP_PahariEiJ_G0027831)	Pik3c2b (MGP_PahariEiJ_G0027830)	Mdm4 (MGP_PahariEiJ_G0027829)	Lrrn2 (MGP_PahariEiJ_G0027828)	Nfasc (MGP_PahariEiJ_G0027827)	Cntn2 (MGP_PahariEiJ_G0027826)
Shrew mouse	MODERN SPECIES	18	Cyb5r1 (MGP_PahariEiJ_G0027857)	Mgat4f (MGP_PahariEiJ_G0027856) #8	Tmem183a (MGP_PahariEiJ_G0027855) #7	Ppfia4 (MGP_PahariEiJ_G0027854) #9	Myog (MGP_PahariEiJ_G0027853) #10	Adora1 (MGP_PahariEiJ_G0027852) #11	Mybph (MGP_PahariEiJ_G0027851) #12	Chil1 (MGP_PahariEiJ_G0027850) #13	Chit1 (MGP_PahariEiJ_G0027849) #14	Btg2 (MGP_PahariEiJ_G0027848) #16	Fmod (MGP_PahariEiJ_G0027847) #17	Prelp (MGP_PahariEiJ_G0027846) #18	Optc (MGP_PahariEiJ_G0027845) #19	MGP_PahariEiJ_G0027844 #20	Lax1 (MGP_PahariEiJ_G0027843) #21	MGP_PahariEiJ_G0027842 #22	MGP_PahariEiJ_G0027841 #22	Zc3h11a (MGP_PahariEiJ_G0027840) #23	Snrpe (MGP_PahariEiJ_G0027839) #24	Sox13 (MGP_PahariEiJ_G0027838) #25	Etnk2 (MGP_PahariEiJ_G0027837) #26	Ren1 (MGP_PahariEiJ_G0027836)	Golt1a (MGP_PahariEiJ_G0027835)	MGP_PahariEiJ_G0027834	MGP_PahariEiJ_G0027833	Plekha6 (MGP_PahariEiJ_G0027832)	Ppp1r15b (MGP_PahariEiJ_G0027831)	Pik3c2b (MGP_PahariEiJ_G0027830)	Mdm4 (MGP_PahariEiJ_G0027829)	Lrrn2 (MGP_PahariEiJ_G0027828)	Nfasc (MGP_PahariEiJ_G0027827)
Rat	MODERN SPECIES	4	Cyb5r1 (ENSRNOG00000003973)	Mgat4e-like (ENSRNOG00000027702) #8	Tmem183a (ENSRNOG00000003594) #7	Ppfia4 (ENSRNOG00000003494) #9	Myog (ENSRNOG00000030743) #10	Adora1 (ENSRNOG00000003442) #11	Mybph (ENSRNOG00000003336) #12	Chi3l1 (ENSRNOG00000053272) #13	Chit1 (ENSRNOG00000028072) #14	Btg2 (ENSRNOG00000003300) #16	Fmod (ENSRNOG00000003183) #17	Prelp (ENSRNOG00000003120) #18	Optc (ENSRNOG00000003059) #19	Atp2b4 (ENSRNOG00000003031) #20	Lax1 (ENSRNOG00000028250) #21	Zbed6 (ENSRNOG00000053210) #22	Snrpe (ENSRNOG00000067587) ##24	LOC498231 (ENSRNOG00000029418)	Sox13 (ENSRNOG00000028353) #25	Etnk2 (ENSRNOG00000028368) #26	Ren (ENSRNOG00000002937)	Kiss1 (ENSRNOG00000047481)	Golt1a (ENSRNOG00000002936)	Plekha6 (ENSRNOG00000002907)	Ppp1r15b (ENSRNOG00000028493)	Pik3c2b (ENSRNOG00000029938)	Mdm4 (ENSRNOG00000009696)	Lrrn2 (ENSRNOG00000009691)	Nfasc (ENSRNOG00000030515)	Cntn2 (ENSRNOG00000009033)	Tmem81 (ENSRNOG00000028752)
Cricetidae	ANCESTRAL SPECIES	13	ENSGT00940000160784	ENSGT00940000163241 #8	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193	ENSGT00390000006349
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00940000160784	ENSGT00940000163241 #8	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193	ENSGT00390000006349
Chinese hamster chok1gshd	MODERN SPECIES	2	Cyb5r1 (ENSCGRG00001024525)	Mgat4f (ENSCGRG00001004313) #8	Tmem183a (ENSCGRG00001008850) #7	Ppfia4 (ENSCGRG00001024386) #9	Myog (ENSCGRG00001024598) #10	Adora1 (ENSCGRG00001000698) #11	Mybph (ENSCGRG00001015181) #12	Chil1 (ENSCGRG00001022520) #13	Chit1 (ENSCGRG00001007003) #14	Btg2 (ENSCGRG00001018732) #16	Fmod (ENSCGRG00001015148) #17	Prelp (ENSCGRG00001015698) #18	Optc (ENSCGRG00001022912) #19	Atp2b4 (ENSCGRG00001011759) #20	Lax1 (ENSCGRG00001019553) #21	Zbed6 (ENSCGRG00001003149) #22	Zc3h11a (ENSCGRG00001014561) #23	Snrpe (ENSCGRG00001019074) #24	Sox13 (ENSCGRG00001024218) #25	Etnk2 (ENSCGRG00001019568) #26	Ren1 (ENSCGRG00001009655)	ENSCGRG00001011869	Golt1a (ENSCGRG00001012446)	Plekha6 (ENSCGRG00001023579)	Ppp1r15b (ENSCGRG00001007710)	Pik3c2b (ENSCGRG00001024716)	Mdm4 (ENSCGRG00001004339)	Lrrn2 (ENSCGRG00001010870)	Nfasc (ENSCGRG00001010423)	Cntn2 (ENSCGRG00001000875)	Tmem81 (ENSCGRG00001003877)
Cricetidae_B	ANCESTRAL SPECIES	8	ENSGT00940000160784	ENSGT00940000163241 #8	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193	ENSGT00390000006349
Prairie vole	MODERN SPECIES	14	Adipor1 (ENSMOCG00000011542)	Cyb5r1 (ENSMOCG00000011285)	Mgat4f (ENSMOCG00000006511) #8	Tmem183a (ENSMOCG00000001009) #7	Ppfia4 (ENSMOCG00000023033) #9	Myog (ENSMOCG00000021956) #10	Adora1 (ENSMOCG00000017725) #11	Mybph (ENSMOCG00000016369) #12	Chil1 (ENSMOCG00000000618) #13	Btg2 (ENSMOCG00000017852) #16	Fmod (ENSMOCG00000015819) #17	Prelp (ENSMOCG00000012807) #18	Optc (ENSMOCG00000002786) #19	Atp2b4 (ENSMOCG00000001360) #20	Lax1 (ENSMOCG00000019077) #21	Zbed6 (ENSMOCG00000001415) #22	ENSMOCG00000018144 #23	Snrpe (ENSMOCG00000019341) #24	Sox13 (ENSMOCG00000004872) #25	Etnk2 (ENSMOCG00000016784) #26	Ren1 (ENSMOCG00000012713)	Golt1a (ENSMOCG00000017873)	Plekha6 (ENSMOCG00000019638)	Ppp1r15b (ENSMOCG00000021507)	Pik3c2b (ENSMOCG00000019428)	Mdm4 (ENSMOCG00000002099)	Lrrn2 (ENSMOCG00000014938)	Nfasc (ENSMOCG00000001737)	ENSMOCG00000001856	Cntn2 (ENSMOCG00000020328)	Rbbp5 (ENSMOCG00000014868)
Northern American deer mouse	MODERN SPECIES	2	Cyb5r1 (ENSPEMG00000016852)	Mgat4f (ENSPEMG00000017545) #8	Tmem183a (ENSPEMG00000011541) #7	Ppfia4 (ENSPEMG00000008757) #9	Myog (ENSPEMG00000006258) #10	Adora1 (ENSPEMG00000031414) #11	Mybph (ENSPEMG00000018187) #12	Chil1 (ENSPEMG00000010614) #13	Chit1 (ENSPEMG00000001900) #14	Btg2 (ENSPEMG00000026893) #16	Fmod (ENSPEMG00000014900) #17	Prelp (ENSPEMG00000011488) #18	Optc (ENSPEMG00000001092) #19	Atp2b4 (ENSPEMG00000015469) #20	Lax1 (ENSPEMG00000025679) #21	Zbed6 (ENSPEMG00000025595) #22	ENSPEMG00000007494 #23	Snrpe (ENSPEMG00000008031) #24	Sox13 (ENSPEMG00000011632) #25	Etnk2 (ENSPEMG00000001456) #26	Ren1 (ENSPEMG00000014347)	ENSPEMG00000027240	Golt1a (ENSPEMG00000007562)	Plekha6 (ENSPEMG00000000750)	Ppp1r15b (ENSPEMG00000010981)	Pik3c2b (ENSPEMG00000007478)	Mdm4 (ENSPEMG00000018483)	Lrrn2 (ENSPEMG00000010135)	Nfasc (ENSPEMG00000001323)	Cntn2 (ENSPEMG00000020849)	Tmem81 (ENSPEMG00000029756)
Upper Galilee mountains blind mole rat	MODERN SPECIES	699	Adipor1 (ENSNGAG00000022932)	Cyb5r1 (ENSNGAG00000012253)	Tmem183a (ENSNGAG00000023196) #7	ENSNGAG00000023538	Ppfia4 (ENSNGAG00000024254) #9	Myog (ENSNGAG00000010861) #10	Adora1 (ENSNGAG00000023414) #11	Mybph (ENSNGAG00000014067) #12	Chil1 (ENSNGAG00000023060) #13	Chit1 (ENSNGAG00000021293) #14	Btg2 (ENSNGAG00000022776) #16	Fmod (ENSNGAG00000013706) #17	Prelp (ENSNGAG00000014170) #18	Atp2b4 (ENSNGAG00000005391) #20	Lax1 (ENSNGAG00000021147) #21	Zbed6 (ENSNGAG00000014592) #22	ENSNGAG00000001706 #23	Snrpe (ENSNGAG00000021588) #24	Sox13 (ENSNGAG00000010564) #25	Etnk2 (ENSNGAG00000022245) #26	Ren1 (ENSNGAG00000022621)	ENSNGAG00000022299	Golt1a (ENSNGAG00000019870)	Plekha6 (ENSNGAG00000023899)	Ppp1r15b (ENSNGAG00000001242)	Pik3c2b (ENSNGAG00000008939)	Mdm4 (ENSNGAG00000012344)	Lrrn2 (ENSNGAG00000001325)
Lesser Egyptian jerboa	MODERN SPECIES	102														Fa2h (ENSJJAG00000018811)	Rfwd3 (ENSJJAG00000009967)	Zbed6 (ENSJJAG00000001904) #22	ENSJJAG00000019323 #23	Etnk2 (ENSJJAG00000000142) #26	Ren1 (ENSJJAG00000021360)	Golt1a (ENSJJAG00000016699)	ENSJJAG00000001042	Ppp1r15b (ENSJJAG00000013562)	Pik3c2b (ENSJJAG00000013864)	Mdm4 (ENSJJAG00000017144)	Lrrn2 (ENSJJAG00000021288)	Nfasc (ENSJJAG00000022015)	Cntn2 (ENSJJAG00000012638)	Tmem81 (ENSJJAG00000002040)	Rbbp5 (ENSJJAG00000021045)	Dstyk (ENSJJAG00000013714)	Tmcc2 (ENSJJAG00000024293)
Kangaroo rat	MODERN SPECIES	354	Cyb5r1 (ENSDORG00000007313)	ENSDORG00000025988 #8	Tmem183a (ENSDORG00000016500) #7	Ppfia4 (ENSDORG00000016503) #9	Myog (ENSDORG00000029186) #10	Adora1 (ENSDORG00000027122) #11	Mybph (ENSDORG00000002129) #12	Chil1 (ENSDORG00000002127) #13	Chit1 (ENSDORG00000010764) #14	Btg2 (ENSDORG00000025474) #16	Fmod (ENSDORG00000029378) #17	Prelp (ENSDORG00000003488) #18	Optc (ENSDORG00000003489) #19	Atp2b4 (ENSDORG00000014618) #20	ENSDORG00000014621 #21	Zbed6 (ENSDORG00000025233) #22	ENSDORG00000003463 #23	ENSDORG00000023819 ##24	Sox13 (ENSDORG00000003409) #25	Etnk2 (ENSDORG00000003410) #26	Ren1 (ENSDORG00000003412)	ENSDORG00000003414	Golt1a (ENSDORG00000003415)	Plekha6 (ENSDORG00000003416)	Ppp1r15b (ENSDORG00000028377)	Pik3c2b (ENSDORG00000006835)	ENSDORG00000023943	Mdm4 (ENSDORG00000006873)	Lrrn2 (ENSDORG00000008526)	Nfasc (ENSDORG00000011731)	Cntn2 (ENSDORG00000014240)
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000163241 #8	ENSGT00940000163962	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193	ENSGT00390000006349
Hystricomorpha	ANCESTRAL SPECIES	29	ENSGT00940000163241 #8	ENSGT00940000163962	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00390000012818.o.b ##24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193
Hystricomorpha_a	ANCESTRAL SPECIES	13	ENSGT00940000160784	ENSGT00940000163241 #8	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00390000012818.o.b ##24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193
Guinea pig	MODERN SPECIES	12	CYB5R1 (ENSCPOG00000040552)	ENSCPOG00000005380 #8	TMEM183A (ENSCPOG00000027339) #7	PPFIA4 (ENSCPOG00000008983) #9	MYOG (ENSCPOG00000023459) #10	ADORA1 (ENSCPOG00000032582) #11	MYBPH (ENSCPOG00000005216) #12	CHI3L1 (ENSCPOG00000005221) #13	CHIT1 (ENSCPOG00000021800) #14	BTG2 (ENSCPOG00000035133) #16	FMOD (ENSCPOG00000034737) #17	PRELP (ENSCPOG00000031553) #18	OPTC (ENSCPOG00000009658) #19	ATP2B4 (ENSCPOG00000005714) #20	LAX1 (ENSCPOG00000005721) #21	ZBED6 (ENSCPOG00000036035) #22	ENSCPOG00000012421 #23	ENSCPOG00000023757 ##24	SOX13 (ENSCPOG00000006604) #25	ETNK2 (ENSCPOG00000023063) #26	REN (ENSCPOG00000022768)	KISS1 (ENSCPOG00000032840)	GOLT1A (ENSCPOG00000004206)	PLEKHA6 (ENSCPOG00000011824)	PPP1R15B (ENSCPOG00000005954)	PIK3C2B (ENSCPOG00000005959)	MDM4 (ENSCPOG00000008227)	LRRN2 (ENSCPOG00000026151)	NFASC (ENSCPOG00000011736)	CNTN2 (ENSCPOG00000011751)	ENSCPOG00000011763
Hystricomorpha_b	ANCESTRAL SPECIES	4	ENSGT00940000160784	ENSGT00940000163962	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00390000012818.o.b ##24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000157024	ENSGT00940000159193	ENSGT00390000006349
Degu	MODERN SPECIES	50	ENSODEG00000011458 #8	ENSODEG00000012157	ENSODEG00000012180 #7	PPFIA4 (ENSODEG00000011585) #9	MYOG (ENSODEG00000011506) #10	ADORA1 (ENSODEG00000012258) #11	MYBPH (ENSODEG00000011869) #12	CHI3L1 (ENSODEG00000011673) #13	CHIT1 (ENSODEG00000012946) #14	BTG2 (ENSODEG00000012528) #16	FMOD (ENSODEG00000012164) #17	PRELP (ENSODEG00000013597) #18	OPTC (ENSODEG00000011941) #19	ENSODEG00000020037	ATP2B4 (ENSODEG00000013312) #20	ZBED6 (ENSODEG00000019959) #22	ENSODEG00000012788 #23	SNRPE (ENSODEG00000013393) #24	ENSODEG00000019942	ENSODEG00000013517	ENSODEG00000020001	SOX13 (ENSODEG00000014124) #25	ETNK2 (ENSODEG00000011893) #26	REN (ENSODEG00000013805)	KISS1 (ENSODEG00000015011)	GOLT1A (ENSODEG00000013193)	PLEKHA6 (ENSODEG00000011957)	PPP1R15B (ENSODEG00000014053)	PIK3C2B (ENSODEG00000012433)	MDM4 (ENSODEG00000013499)	ENSODEG00000012222
Long-tailed chinchilla	MODERN SPECIES	113	CYB5R1 (ENSCLAG00000010011)	ENSCLAG00000011787	TMEM183A (ENSCLAG00000013037) #7	PPFIA4 (ENSCLAG00000011878) #9	MYOG (ENSCLAG00000013979) #10	ADORA1 (ENSCLAG00000010628) #11	MYBPH (ENSCLAG00000011779) #12	CHI3L1 (ENSCLAG00000013593) #13	CHIT1 (ENSCLAG00000010708) #14	BTG2 (ENSCLAG00000011760) #16	FMOD (ENSCLAG00000013270) #17	PRELP (ENSCLAG00000013735) #18	OPTC (ENSCLAG00000011555) #19	ATP2B4 (ENSCLAG00000012025) #20	LAX1 (ENSCLAG00000014362) #21	ZBED6 (ENSCLAG00000017956) #22	ENSCLAG00000011966 #23	ENSCLAG00000013355 ##24	SOX13 (ENSCLAG00000012187) #25	ETNK2 (ENSCLAG00000012729) #26	REN (ENSCLAG00000016114)	KISS1 (ENSCLAG00000017136)	GOLT1A (ENSCLAG00000015523)	PLEKHA6 (ENSCLAG00000011288)	PPP1R15B (ENSCLAG00000012864)	PIK3C2B (ENSCLAG00000013032)	MDM4 (ENSCLAG00000011995)	NFASC (ENSCLAG00000012040)	CNTN2 (ENSCLAG00000011919)	TMEM81 (ENSCLAG00000013114)	RBBP5 (ENSCLAG00000014383)
Naked mole-rat female	MODERN SPECIES	16	ENSHGLG00000040315	TMEM183A (ENSHGLG00000008174) #7	PPFIA4 (ENSHGLG00000005427) #9	MYOG (ENSHGLG00000004327) #10	ADORA1 (ENSHGLG00000004185) #11	MYBPH (ENSHGLG00000007893) #12	CHI3L1 (ENSHGLG00000005828) #13	CHIT1 (ENSHGLG00000004337) #14	BTG2 (ENSHGLG00000034911) #16	FMOD (ENSHGLG00000003978) #17	ENSHGLG00000003662 #18	ENSHGLG00000050082 #19	ENSHGLG00000003582	ATP2B4 (ENSHGLG00000005394) #20	LAX1 (ENSHGLG00000048348) #21	ZBED6 (ENSHGLG00000041611) #22	ENSHGLG00000005495 #23	ENSHGLG00000004221 ##24	SOX13 (ENSHGLG00000004023) #25	ETNK2 (ENSHGLG00000003816) #26	REN (ENSHGLG00000008129)	KISS1 (ENSHGLG00000007157)	GOLT1A (ENSHGLG00000005741)	PLEKHA6 (ENSHGLG00000003457)	PPP1R15B (ENSHGLG00000010479)	PIK3C2B (ENSHGLG00000008940)	MDM4 (ENSHGLG00000040409)	LRRN2 (ENSHGLG00000047392)	NFASC (ENSHGLG00000008978)	CNTN2 (ENSHGLG00000019314)	TMEM81 (ENSHGLG00000009323)
Sciuridae	ANCESTRAL SPECIES		ENSGT00940000160784	ENSGT00940000163241 #8	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000161204	ENSGT00940000157024	ENSGT00940000159193	ENSGT00390000006349
Eurasian red squirrel	MODERN SPECIES	3	ENSSVLG00005008850 #8	TMEM183A (ENSSVLG00005008814) #7	PPFIA4 (ENSSVLG00005008501) #9	MYOG (ENSSVLG00005008444) #10	ENSSVLG00005008399 #11	MYBPH (ENSSVLG00005008287) #12	CHI3L1 (ENSSVLG00005008207) #13	ENSSVLG00005008190	ENSSVLG00005008166	BTG2 (ENSSVLG00005008142) #16	FMOD (ENSSVLG00005008105) #17	PRELP (ENSSVLG00005008083) #18	OPTC (ENSSVLG00005008040) #19	ATP2B4 (ENSSVLG00005007980) #20	LAX1 (ENSSVLG00005007924) #21	ZBED6 (ENSSVLG00005007904) #22	ENSSVLG00005007861 #23	SNRPE (ENSSVLG00005007786) #24	ENSSVLG00005007769	ENSSVLG00005007750	SOX13 (ENSSVLG00005007665) #25	ETNK2 (ENSSVLG00005007611) #26	REN (ENSSVLG00005007539)	KISS1 (ENSSVLG00005007514)	GOLT1A (ENSSVLG00005007486)	PLEKHA6 (ENSSVLG00005007313)	PPP1R15B (ENSSVLG00005007196)	PIK3C2B (ENSSVLG00005007149)	MDM4 (ENSSVLG00005006908)	LRRN2 (ENSSVLG00005006839)	NFASC (ENSSVLG00005006491)
Marmotini	ANCESTRAL SPECIES	60	ENSGT00940000160784	ENSGT00940000163241 #8	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00940000161204	ENSGT00910000147821
Marmotini_b	ANCESTRAL SPECIES	70	ENSGT00940000160784	ENSGT00940000163241 #8	ENSGT00390000009310 #7	ENSGT01050000244900.a.a.a.a.a #9	ENSGT00950000182959.a.b.b.b #10	ENSGT01030000234555.a.a.b.a.a #11	ENSGT00940000158040 #12	ENSGT00940000161815 #13	ENSGT00940000161149 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898	ENSGT00390000008827	ENSGT00390000014507.b	ENSGT00940000159692	ENSGT00940000154404.b	ENSGT00940000158263	ENSGT00530000063539.a	ENSGT00910000147821
Squirrel	MODERN SPECIES	167	CYB5R1 (ENSSTOG00000021865)	ENSSTOG00000028547 #8	ENSSTOG00000012466 #7	PPFIA4 (ENSSTOG00000020313) #9	MYOG (ENSSTOG00000028049) #10	ADORA1 (ENSSTOG00000021164) #11	MYBPH (ENSSTOG00000005228) #12	CHI3L1 (ENSSTOG00000015436) #13	CHIT1 (ENSSTOG00000015059) #14	BTG2 (ENSSTOG00000024859) #16	FMOD (ENSSTOG00000023921) #17	PRELP (ENSSTOG00000011558) #18	OPTC (ENSSTOG00000011562) #19	ATP2B4 (ENSSTOG00000010657) #20	LAX1 (ENSSTOG00000022601) #21	ZBED6 (ENSSTOG00000022677) #22	ENSSTOG00000000736 #23	ENSSTOG00000031197 ##24	SOX13 (ENSSTOG00000015089) #25	ETNK2 (ENSSTOG00000015115) #26	REN (ENSSTOG00000015124)	KISS1 (ENSSTOG00000034780)	GOLT1A (ENSSTOG00000012315)	PLEKHA6 (ENSSTOG00000012321)	PPP1R15B (ENSSTOG00000027617)	PIK3C2B (ENSSTOG00000004126)	MDM4 (ENSSTOG00000004184)