Hystricomorpha_a	ANCESTRAL SPECIES	13	ENSGT00940000160784 #7	ENSGT00940000163241	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00390000012818.o.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898 #27	ENSGT00390000008827 #28	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204	ENSGT00940000157024 #34	ENSGT00940000159193 #35
Hystricomorpha_b	ANCESTRAL SPECIES	4	ENSGT00940000160784 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00390000012818.o.b #24	ENSGT00940000158759 #25	ENSGT00950000182939.b.a.a #26	ENSGT00940000157898 #27	ENSGT00390000008827 #28	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000157024 #34	ENSGT00940000159193 #35	ENSGT00390000006349 #36
Long-tailed chinchilla	MODERN SPECIES	113	CYB5R1 (ENSCLAG00000010011) #7	ENSCLAG00000011787 #8	TMEM183A (ENSCLAG00000013037) #9	PPFIA4 (ENSCLAG00000011878) #10	MYOG (ENSCLAG00000013979) #11	ADORA1 (ENSCLAG00000010628) #12	MYBPH (ENSCLAG00000011779) #13	CHI3L1 (ENSCLAG00000013593) #14	CHIT1 (ENSCLAG00000010708) #15	BTG2 (ENSCLAG00000011760) #16	FMOD (ENSCLAG00000013270) #17	PRELP (ENSCLAG00000013735) #18	OPTC (ENSCLAG00000011555) #19	ATP2B4 (ENSCLAG00000012025) #20	LAX1 (ENSCLAG00000014362) #21	ZBED6 (ENSCLAG00000017956) #22	ENSCLAG00000011966 #23	ENSCLAG00000013355 #24	SOX13 (ENSCLAG00000012187) #25	ETNK2 (ENSCLAG00000012729) #26	REN (ENSCLAG00000016114) #27	KISS1 (ENSCLAG00000017136) #28	GOLT1A (ENSCLAG00000015523) #29	PLEKHA6 (ENSCLAG00000011288) #30	PPP1R15B (ENSCLAG00000012864) #31	PIK3C2B (ENSCLAG00000013032) #32	MDM4 (ENSCLAG00000011995) #33	NFASC (ENSCLAG00000012040) #34	CNTN2 (ENSCLAG00000011919) #35	TMEM81 (ENSCLAG00000013114) #36	RBBP5 (ENSCLAG00000014383) #37
Degu	MODERN SPECIES	50	ENSODEG00000011458	ENSODEG00000012157	ENSODEG00000012180 #9	PPFIA4 (ENSODEG00000011585) #10	MYOG (ENSODEG00000011506) #11	ADORA1 (ENSODEG00000012258) #12	MYBPH (ENSODEG00000011869) #13	CHI3L1 (ENSODEG00000011673) #14	CHIT1 (ENSODEG00000012946) #15	BTG2 (ENSODEG00000012528) #16	FMOD (ENSODEG00000012164) #17	PRELP (ENSODEG00000013597) #18	OPTC (ENSODEG00000011941) #19	ENSODEG00000020037	ATP2B4 (ENSODEG00000013312) #20	ZBED6 (ENSODEG00000019959) #22	ENSODEG00000012788 #23	SNRPE (ENSODEG00000013393) ##24	ENSODEG00000019942	ENSODEG00000013517	ENSODEG00000020001	SOX13 (ENSODEG00000014124) #25	ETNK2 (ENSODEG00000011893) #26	REN (ENSODEG00000013805) #27	KISS1 (ENSODEG00000015011) #28	GOLT1A (ENSODEG00000013193) #29	PLEKHA6 (ENSODEG00000011957) #30	PPP1R15B (ENSODEG00000014053) #31	PIK3C2B (ENSODEG00000012433) #32	MDM4 (ENSODEG00000013499) #33	ENSODEG00000012222
Guinea pig	MODERN SPECIES	12	CYB5R1 (ENSCPOG00000040552) #7	ENSCPOG00000005380	TMEM183A (ENSCPOG00000027339) #9	PPFIA4 (ENSCPOG00000008983) #10	MYOG (ENSCPOG00000023459) #11	ADORA1 (ENSCPOG00000032582) #12	MYBPH (ENSCPOG00000005216) #13	CHI3L1 (ENSCPOG00000005221) #14	CHIT1 (ENSCPOG00000021800) #15	BTG2 (ENSCPOG00000035133) #16	FMOD (ENSCPOG00000034737) #17	PRELP (ENSCPOG00000031553) #18	OPTC (ENSCPOG00000009658) #19	ATP2B4 (ENSCPOG00000005714) #20	LAX1 (ENSCPOG00000005721) #21	ZBED6 (ENSCPOG00000036035) #22	ENSCPOG00000012421 #23	ENSCPOG00000023757 #24	SOX13 (ENSCPOG00000006604) #25	ETNK2 (ENSCPOG00000023063) #26	REN (ENSCPOG00000022768) #27	KISS1 (ENSCPOG00000032840) #28	GOLT1A (ENSCPOG00000004206) #29	PLEKHA6 (ENSCPOG00000011824) #30	PPP1R15B (ENSCPOG00000005954) #31	PIK3C2B (ENSCPOG00000005959) #32	MDM4 (ENSCPOG00000008227) #33	LRRN2 (ENSCPOG00000026151)	NFASC (ENSCPOG00000011736) #34	CNTN2 (ENSCPOG00000011751) #35	ENSCPOG00000011763 #37