Theria	ANCESTRAL SPECIES	12	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000163411 #22	ENSGT00390000012818.o.a.b #24	ENSGT00390000012818.o.a.a.a.a ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Eutheria	ANCESTRAL SPECIES		ENSGT00940000163962 #8	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.b #24	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.b #24	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34
Primates	ANCESTRAL SPECIES	7	ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147464
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Bushbaby	MODERN SPECIES	170	ENSOGAG00000033450 #7	ENSOGAG00000031654 #8	TMEM183A (ENSOGAG00000000911) #9	PPFIA4 (ENSOGAG00000000913) #10	MYOG (ENSOGAG00000029573) #11	ADORA1 (ENSOGAG00000000918) #12	MYBPH (ENSOGAG00000000919) #13	CHI3L1 (ENSOGAG00000000923) #14	CHIT1 (ENSOGAG00000000926) #15	BTG2 (ENSOGAG00000025083) #16	FMOD (ENSOGAG00000000239) #17	PRELP (ENSOGAG00000032261) #18	OPTC (ENSOGAG00000000240) #19	ATP2B4 (ENSOGAG00000000241) #20	ENSOGAG00000000242 #21	ZBED6 (ENSOGAG00000032362) #22	ENSOGAG00000000243 #23	SNRPE (ENSOGAG00000004309) #24	ENSOGAG00000030218 #25	SOX13 (ENSOGAG00000011880) #26	ETNK2 (ENSOGAG00000011891) #27	REN (ENSOGAG00000011896) #28	GOLT1A (ENSOGAG00000011900) #29	PLEKHA6 (ENSOGAG00000011902) #30	PPP1R15B (ENSOGAG00000011911) #31	PIK3C2B (ENSOGAG00000011912) #32	MDM4 (ENSOGAG00000011679) #33	LRRN2 (ENSOGAG00000034557) #34	NFASC (ENSOGAG00000007371) #35	CNTN2 (ENSOGAG00000007375) #36	TMEM81 (ENSOGAG00000030515) #37
Lemuriformes	ANCESTRAL SPECIES	26	ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Lemuriformes_a	ANCESTRAL SPECIES	12	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Greater bamboo lemur	MODERN SPECIES	19	ENSPSMG00000002735 #7	TMEM183A (ENSPSMG00000002767) #9	PPFIA4 (ENSPSMG00000002896) #10	MYOG (ENSPSMG00000003024) #11	ENSPSMG00000003026	ENSPSMG00000003027 #12	MYBPH (ENSPSMG00000003049) #13	CHI3L1 (ENSPSMG00000003099) #14	CHIT1 (ENSPSMG00000003124) #15	BTG2 (ENSPSMG00000003135) #16	FMOD (ENSPSMG00000003138) #17	PRELP (ENSPSMG00000003143) #18	OPTC (ENSPSMG00000003150) #19	ATP2B4 (ENSPSMG00000003361) #20	LAX1 (ENSPSMG00000003685) #21	ZBED6 (ENSPSMG00000003690) #22	ENSPSMG00000003815 #23	SNRPE (ENSPSMG00000003970) ##24	SOX13 (ENSPSMG00000004006) #26	ETNK2 (ENSPSMG00000004060) #27	REN (ENSPSMG00000004091) #28	KISS1 (ENSPSMG00000004115)	GOLT1A (ENSPSMG00000004122) #29	PLEKHA6 (ENSPSMG00000004203) #30	PPP1R15B (ENSPSMG00000004234) #31	PIK3C2B (ENSPSMG00000004551) #32	MDM4 (ENSPSMG00000004817) #33	LRRN2 (ENSPSMG00000004951) #34	NFASC (ENSPSMG00000005406) #35	CNTN2 (ENSPSMG00000006286) #36	TMEM81 (ENSPSMG00000006444) #37
Haplorrhini	ANCESTRAL SPECIES	7	ENSGT00940000163962 #8	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147464
Simiiformes	ANCESTRAL SPECIES	8	ENSGT00940000163962 #8	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000146964
Catarrhini	ANCESTRAL SPECIES	10	ENSGT00940000163962 #8	ENSGT00940000163241 #7	ENSGT00390000009310.j.a #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00550000074817.e.b	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34
Cercopithecidae	ANCESTRAL SPECIES	20	ENSGT00940000163962 #8	ENSGT00390000009310.j.a.a #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00950000182891.a.a.b.a.a.a.a	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00550000074817.e.b	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34
Cercopithecinae	ANCESTRAL SPECIES	18	ENSGT00940000163962 #8	ENSGT00390000009310.j.a.a #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00950000182891.a.a.b.a.a.a.a	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00550000074817.e.b	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.b #24	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00910000147745	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00910000148170	ENSGT00950000182891.a.a.b.a.a.a.a.y.a	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00390000018706.m.b.b.l.a	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00550000074817.e.b	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.b #24	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33
Macaca	ANCESTRAL SPECIES		ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00910000147745	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00910000148170	ENSGT00950000182891.a.a.b.a.a.a.a.y.a	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00390000018706.m.b.b.l.a	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00550000074817.e.b	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000146964
Pig-tailed macaque	MODERN SPECIES	113	MYOG (ENSMNEG00000035895) #11	ADORA1 (ENSMNEG00000036904) #12	MYBPH (ENSMNEG00000041712) #13	ENSMNEG00000018834	CHI3L1 (ENSMNEG00000041632) #14	CHIT1 (ENSMNEG00000028068) #15	BTG2 (ENSMNEG00000030702) #16	FMOD (ENSMNEG00000037353) #17	ENSMNEG00000010740	ENSMNEG00000009223	PRELP (ENSMNEG00000036078) #18	OPTC (ENSMNEG00000007381) #19	ATP2B4 (ENSMNEG00000028334) #20	ENSMNEG00000038506	LAX1 (ENSMNEG00000035734) #21	ZBED6 (ENSMNEG00000019676) #22	ENSMNEG00000035060	ENSMNEG00000031205 #23	SNRPE (ENSMNEG00000034559) ##24	SOX13 (ENSMNEG00000027894) #26	ENSMNEG00000000205	ETNK2 (ENSMNEG00000030511) #27	REN (ENSMNEG00000035397) #28	KISS1 (ENSMNEG00000039554)	GOLT1A (ENSMNEG00000033962) #29	PLEKHA6 (ENSMNEG00000029610) #30	PPP1R15B (ENSMNEG00000040450) #31	PIK3C2B (ENSMNEG00000044388) #32	MDM4 (ENSMNEG00000026547) #33	LRRN2 (ENSMNEG00000001373) #34	ENSMNEG00000025350
Vervet Monkey	MODERN SPECIES	17	ADIPOR1 (ENSCSAG00000014228)	CYB5R1 (ENSCSAG00000014235)	TMEM183A (ENSCSAG00000014258) #9	PPFIA4 (ENSCSAG00000014279) #10	MYOG (ENSCSAG00000014291) #11	ADORA1 (ENSCSAG00000014298) #12	MYBPH (ENSCSAG00000014322) #13	CHI3L1 (ENSCSAG00000014333) #14	CHIT1 (ENSCSAG00000014338) #15	BTG2 (ENSCSAG00000014342) #16	FMOD (ENSCSAG00000014347) #17	PRELP (ENSCSAG00000014352) #18	OPTC (ENSCSAG00000014362) #19	ATP2B4 (ENSCSAG00000014379) #20	LAX1 (ENSCSAG00000014387) #21	ZBED6 (ENSCSAG00000000255) #22	ENSCSAG00000014396 #23	ENSCSAG00000000256	SOX13 (ENSCSAG00000014423) #26	ETNK2 (ENSCSAG00000014439) #27	REN (ENSCSAG00000014476) #28	ENSCSAG00000014497	KISS1 (ENSCSAG00000014502)	GOLT1A (ENSCSAG00000014504) #29	PLEKHA6 (ENSCSAG00000014522) #30	ENSCSAG00000014530	PPP1R15B (ENSCSAG00000000257) #31	PIK3C2B (ENSCSAG00000014548) #32	MDM4 (ENSCSAG00000014561) #33	LRRN2 (ENSCSAG00000000258) #34	NFASC (ENSCSAG00000014579) #35
Hominoidea	ANCESTRAL SPECIES	7	ENSGT00940000163241 #7	ENSGT00390000009310.j.a #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00390000018706.m.a	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00550000074817.e.b	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000146964
Hominidae	ANCESTRAL SPECIES	6	ENSGT00940000163241 #7	ENSGT00390000009310.j.a #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00390000018706.m.a	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00550000074817.e.b	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000146964
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	6	ENSGT00940000163241 #7	ENSGT00390000009310.j.a #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00390000018706.m.a	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00550000074817.e.b	ENSGT00920000149095.a.g #23	ENSGT00390000016972.a.a.b.b.b.a.a.b	ENSGT01010000222851.d	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00390000006350.m.a.c.b.a.a	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154818.a.a	ENSGT00940000154404.b #31	ENSGT00940000158263 #32
Homo/Pan group	ANCESTRAL SPECIES	7	ENSGT00940000163241 #7	ENSGT00390000009310.j.a #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00390000018706.m.a	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00550000074817.e.b	ENSGT00920000149095.a.g #23	ENSGT00390000016972.a.a.b.b.b.a.a.b	ENSGT01010000222851.d	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00390000006350.m.a.c.b.a.a	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33
Pan	ANCESTRAL SPECIES		ENSGT00940000163241 #7	ENSGT00390000009310.j.a #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00390000018706.m.a	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00550000074817.e.b	ENSGT00920000149095.a.g #23	ENSGT00390000016972.a.a.b.b.b.a.a.b	ENSGT01010000222851.d	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00390000006350.m.a.c.b.a.a	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154818.a.a	ENSGT00940000154404.b #31	ENSGT00940000158263 #32
Bonobo	MODERN SPECIES		ENSPPAG00000040754 #7	TMEM183A (ENSPPAG00000025262) #9	PPFIA4 (ENSPPAG00000024271) #10	MYOG (ENSPPAG00000029832) #11	ADORA1 (ENSPPAG00000034092) #12	MYBPH (ENSPPAG00000007115) #13	CHI3L1 (ENSPPAG00000033305) #14	ENSPPAG00000040620 #15	BTG2 (ENSPPAG00000008433) #16	FMOD (ENSPPAG00000005300) #17	PRELP (ENSPPAG00000031486) #18	OPTC (ENSPPAG00000042530) #19	ENSPPAG00000029364	ATP2B4 (ENSPPAG00000041080) #20	LAX1 (ENSPPAG00000029666) #21	ZBED6 (ENSPPAG00000026325) #22	ENSPPAG00000033955	ZC3H11A (ENSPPAG00000039060) #23	ENSPPAG00000034231	ENSPPAG00000038394	SNRPE (ENSPPAG00000041057) ##24	ENSPPAG00000036059	SOX13 (ENSPPAG00000029460) #26	ETNK2 (ENSPPAG00000035365) #27	REN (ENSPPAG00000040565) #28	KISS1 (ENSPPAG00000036121)	GOLT1A (ENSPPAG00000026595) #29	PLEKHA6 (ENSPPAG00000035072) #30	ENSPPAG00000037479	PPP1R15B (ENSPPAG00000037139) #31	PIK3C2B (ENSPPAG00000030782) #32
Human	MODERN SPECIES		CYB5R1 (ENSG00000159348)	TMEM183A (ENSG00000163444) #9	PPFIA4 (ENSG00000143847) #10	MYOG (ENSG00000122180) #11	ADORA1 (ENSG00000163485) #12	MYBPH (ENSG00000133055) #13	CHI3L1 (ENSG00000133048) #14	CHIT1 (ENSG00000133063) #15	BTG2 (ENSG00000159388) #16	FMOD (ENSG00000122176) #17	PRELP (ENSG00000188783) #18	OPTC (ENSG00000188770) #19	ATP2B4 (ENSG00000058668) #20	LAX1 (ENSG00000122188) #21	ZC3H11A (ENSG00000058673) #23	ZBED6 (ENSG00000257315) #22	ENSG00000288644	SNRPE (ENSG00000182004) ##24	SOX13 (ENSG00000143842) #26	ETNK2 (ENSG00000143845) #27	REN (ENSG00000143839) #28	KISS1 (ENSG00000170498)	GOLT1A (ENSG00000174567) #29	PLEKHA6 (ENSG00000143850) #30	PPP1R15B (ENSG00000158615) #31	PIK3C2B (ENSG00000133056) #32	MDM4 (ENSG00000198625) #33	LRRN2 (ENSG00000170382) #34	NFASC (ENSG00000163531) #35	CNTN2 (ENSG00000184144) #36	TMEM81 (ENSG00000174529) #37
Platyrrhini	ANCESTRAL SPECIES	24	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a.e #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a.gb #33	ENSGT00940000161204 #34	ENSGT00910000146964	ENSGT00940000157024 #35
Mas night monkey	MODERN SPECIES	958	CYB5R1 (ENSANAG00000020782)	ENSANAG00000025915 #7	TMEM183A (ENSANAG00000032324) #9	PPFIA4 (ENSANAG00000024014) #10	MYOG (ENSANAG00000026197) #11	ADORA1 (ENSANAG00000037584) #12	MYBPH (ENSANAG00000036752) #13	CHI3L1 (ENSANAG00000032956) #14	CHIT1 (ENSANAG00000035638) #15	BTG2 (ENSANAG00000037468) #16	FMOD (ENSANAG00000033755) #17	PRELP (ENSANAG00000034042) #18	OPTC (ENSANAG00000037909) #19	ATP2B4 (ENSANAG00000033579) #20	LAX1 (ENSANAG00000034140) #21	ZBED6 (ENSANAG00000017840) #22	ENSANAG00000034973 #23	ENSANAG00000033622	SNRPE (ENSANAG00000036379) ##24	SOX13 (ENSANAG00000036193) #26	ETNK2 (ENSANAG00000036760) #27	REN (ENSANAG00000034032) #28	KISS1 (ENSANAG00000037472)	GOLT1A (ENSANAG00000026267) #29	PLEKHA6 (ENSANAG00000037119) #30	PPP1R15B (ENSANAG00000036947) #31	PIK3C2B (ENSANAG00000019718) #32	ENSANAG00000036891 #33	ENSANAG00000019407	ENSANAG00000026599	LRRN2 (ENSANAG00000018254) #34
Cebidae	ANCESTRAL SPECIES	23	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a.e #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a.gb #33	ENSGT00940000161204 #34	ENSGT00910000146964	ENSGT00940000157024 #35
Cebidae_a	ANCESTRAL SPECIES	11	ENSGT00940000154563.r	ENSGT00940000160784	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a.e #23	ENSGT01010000222851.a	ENSGT00390000012818.o.b ##24	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a.gb #33	ENSGT00940000155722.m.b	ENSGT00940000161204 #34
Capuchin	MODERN SPECIES	38	ADIPOR1 (ENSCCAG00000023574)	CYB5R1 (ENSCCAG00000036166)	TMEM183A (ENSCCAG00000036374) #9	PPFIA4 (ENSCCAG00000023090) #10	MYOG (ENSCCAG00000036804) #11	ADORA1 (ENSCCAG00000030903) #12	MYBPH (ENSCCAG00000026738) #13	CHI3L1 (ENSCCAG00000028232) #14	CHIT1 (ENSCCAG00000031129) #15	BTG2 (ENSCCAG00000021623) #16	FMOD (ENSCCAG00000024613) #17	PRELP (ENSCCAG00000025891) #18	OPTC (ENSCCAG00000033174) #19	ATP2B4 (ENSCCAG00000027026) #20	LAX1 (ENSCCAG00000000404) #21	ZBED6 (ENSCCAG00000019665) #22	ENSCCAG00000023466 #23	ENSCCAG00000036323	SNRPE (ENSCCAG00000020762) ##24	SOX13 (ENSCCAG00000030362) #26	ETNK2 (ENSCCAG00000018349) #27	REN (ENSCCAG00000022988) #28	ENSCCAG00000036523	PLEKHA6 (ENSCCAG00000035972) #30	ENSCCAG00000016957	ENSCCAG00000034479	ENSCCAG00000020348	PPP1R15B (ENSCCAG00000023930) #31	PIK3C2B (ENSCCAG00000025647) #32	ENSCCAG00000031000 #33	ENSCCAG00000036368
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Glires	ANCESTRAL SPECIES		ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Lagomorpha	ANCESTRAL SPECIES	15	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00530000064100	ENSGT00840000129948
Rabbit	MODERN SPECIES	7	ENSOCUG00000016812 #7	TMEM183A (ENSOCUG00000006191) #9	MYOG (ENSOCUG00000011548) #11	PPFIA4 (ENSOCUG00000027672) #10	ADORA1 (ENSOCUG00000011017) #12	MYBPH (ENSOCUG00000011021) #13	CHI3L1 (ENSOCUG00000026988) #14	CHIT1 (ENSOCUG00000011027) #15	ENSOCUG00000027402 #20	BTG2 (ENSOCUG00000004422) #16	FMOD (ENSOCUG00000009702) #17	PRELP (ENSOCUG00000009707) #18	OPTC (ENSOCUG00000006753) #19	ENSOCUG00000006539 #20	ENSOCUG00000003715 #21	ZBED6 (ENSOCUG00000024739) #22	ENSOCUG00000000251 #23	ENSOCUG00000032632 ##24	SOX13 (ENSOCUG00000023464) #26	REN (ENSOCUG00000023929) #28	ENSOCUG00000028025 #27	ENSOCUG00000033800	PLEKHA6 (ENSOCUG00000007055) #30	PIK3C2B (ENSOCUG00000008052) #32	MDM4 (ENSOCUG00000000005) #33	LRRN2 (ENSOCUG00000010352) #34	NFASC (ENSOCUG00000015363) #35	CNTN2 (ENSOCUG00000015404) #36	ENSOCUG00000030182	RBBP5 (ENSOCUG00000000095)	DSTYK (ENSOCUG00000000097)
Rodentia	ANCESTRAL SPECIES		ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Hystricomorpha	ANCESTRAL SPECIES	29	ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00390000012818.o.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36
Hystricomorpha_a	ANCESTRAL SPECIES	13	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00390000012818.o.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36
Guinea pig	MODERN SPECIES	12	CYB5R1 (ENSCPOG00000040552)	ENSCPOG00000005380 #7	TMEM183A (ENSCPOG00000027339) #9	PPFIA4 (ENSCPOG00000008983) #10	MYOG (ENSCPOG00000023459) #11	ADORA1 (ENSCPOG00000032582) #12	MYBPH (ENSCPOG00000005216) #13	CHI3L1 (ENSCPOG00000005221) #14	CHIT1 (ENSCPOG00000021800) #15	BTG2 (ENSCPOG00000035133) #16	FMOD (ENSCPOG00000034737) #17	PRELP (ENSCPOG00000031553) #18	OPTC (ENSCPOG00000009658) #19	ATP2B4 (ENSCPOG00000005714) #20	LAX1 (ENSCPOG00000005721) #21	ZBED6 (ENSCPOG00000036035) #22	ENSCPOG00000012421 #23	ENSCPOG00000023757 ##24	SOX13 (ENSCPOG00000006604) #26	ETNK2 (ENSCPOG00000023063) #27	REN (ENSCPOG00000022768) #28	KISS1 (ENSCPOG00000032840)	GOLT1A (ENSCPOG00000004206) #29	PLEKHA6 (ENSCPOG00000011824) #30	PPP1R15B (ENSCPOG00000005954) #31	PIK3C2B (ENSCPOG00000005959) #32	MDM4 (ENSCPOG00000008227) #33	LRRN2 (ENSCPOG00000026151) #34	NFASC (ENSCPOG00000011736) #35	CNTN2 (ENSCPOG00000011751) #36	ENSCPOG00000011763
Hystricomorpha_b	ANCESTRAL SPECIES	4	ENSGT00940000160784	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00390000012818.o.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Degu	MODERN SPECIES	50	ENSODEG00000011458 #7	ENSODEG00000012157	ENSODEG00000012180 #9	PPFIA4 (ENSODEG00000011585) #10	MYOG (ENSODEG00000011506) #11	ADORA1 (ENSODEG00000012258) #12	MYBPH (ENSODEG00000011869) #13	CHI3L1 (ENSODEG00000011673) #14	CHIT1 (ENSODEG00000012946) #15	BTG2 (ENSODEG00000012528) #16	FMOD (ENSODEG00000012164) #17	PRELP (ENSODEG00000013597) #18	OPTC (ENSODEG00000011941) #19	ENSODEG00000020037	ATP2B4 (ENSODEG00000013312) #20	ZBED6 (ENSODEG00000019959) #22	ENSODEG00000012788 #23	SNRPE (ENSODEG00000013393) ##24	ENSODEG00000019942	ENSODEG00000013517	ENSODEG00000020001	SOX13 (ENSODEG00000014124) #26	ETNK2 (ENSODEG00000011893) #27	REN (ENSODEG00000013805) #28	KISS1 (ENSODEG00000015011)	GOLT1A (ENSODEG00000013193) #29	PLEKHA6 (ENSODEG00000011957) #30	PPP1R15B (ENSODEG00000014053) #31	PIK3C2B (ENSODEG00000012433) #32	MDM4 (ENSODEG00000013499) #33	ENSODEG00000012222
Long-tailed chinchilla	MODERN SPECIES	113	CYB5R1 (ENSCLAG00000010011)	ENSCLAG00000011787 #8	TMEM183A (ENSCLAG00000013037) #9	PPFIA4 (ENSCLAG00000011878) #10	MYOG (ENSCLAG00000013979) #11	ADORA1 (ENSCLAG00000010628) #12	MYBPH (ENSCLAG00000011779) #13	CHI3L1 (ENSCLAG00000013593) #14	CHIT1 (ENSCLAG00000010708) #15	BTG2 (ENSCLAG00000011760) #16	FMOD (ENSCLAG00000013270) #17	PRELP (ENSCLAG00000013735) #18	OPTC (ENSCLAG00000011555) #19	ATP2B4 (ENSCLAG00000012025) #20	LAX1 (ENSCLAG00000014362) #21	ZBED6 (ENSCLAG00000017956) #22	ENSCLAG00000011966 #23	ENSCLAG00000013355 ##24	SOX13 (ENSCLAG00000012187) #26	ETNK2 (ENSCLAG00000012729) #27	REN (ENSCLAG00000016114) #28	KISS1 (ENSCLAG00000017136)	GOLT1A (ENSCLAG00000015523) #29	PLEKHA6 (ENSCLAG00000011288) #30	PPP1R15B (ENSCLAG00000012864) #31	PIK3C2B (ENSCLAG00000013032) #32	MDM4 (ENSCLAG00000011995) #33	NFASC (ENSCLAG00000012040) #35	CNTN2 (ENSCLAG00000011919) #36	TMEM81 (ENSCLAG00000013114) #37	RBBP5 (ENSCLAG00000014383)
Naked mole-rat female	MODERN SPECIES	16	ENSHGLG00000040315	TMEM183A (ENSHGLG00000008174) #9	PPFIA4 (ENSHGLG00000005427) #10	MYOG (ENSHGLG00000004327) #11	ADORA1 (ENSHGLG00000004185) #12	MYBPH (ENSHGLG00000007893) #13	CHI3L1 (ENSHGLG00000005828) #14	CHIT1 (ENSHGLG00000004337) #15	BTG2 (ENSHGLG00000034911) #16	FMOD (ENSHGLG00000003978) #17	ENSHGLG00000003662 #18	ENSHGLG00000050082 #19	ENSHGLG00000003582	ATP2B4 (ENSHGLG00000005394) #20	LAX1 (ENSHGLG00000048348) #21	ZBED6 (ENSHGLG00000041611) #22	ENSHGLG00000005495 #23	ENSHGLG00000004221 ##24	SOX13 (ENSHGLG00000004023) #26	ETNK2 (ENSHGLG00000003816) #27	REN (ENSHGLG00000008129) #28	KISS1 (ENSHGLG00000007157)	GOLT1A (ENSHGLG00000005741) #29	PLEKHA6 (ENSHGLG00000003457) #30	PPP1R15B (ENSHGLG00000010479) #31	PIK3C2B (ENSHGLG00000008940) #32	MDM4 (ENSHGLG00000040409) #33	LRRN2 (ENSHGLG00000047392) #34	NFASC (ENSHGLG00000008978) #35	CNTN2 (ENSHGLG00000019314) #36	TMEM81 (ENSHGLG00000009323) #37
Sciuridae	ANCESTRAL SPECIES		ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Eurasian red squirrel	MODERN SPECIES	3	ENSSVLG00005008850 #7	TMEM183A (ENSSVLG00005008814) #9	PPFIA4 (ENSSVLG00005008501) #10	MYOG (ENSSVLG00005008444) #11	ENSSVLG00005008399 #12	MYBPH (ENSSVLG00005008287) #13	CHI3L1 (ENSSVLG00005008207) #14	ENSSVLG00005008190	ENSSVLG00005008166	BTG2 (ENSSVLG00005008142) #16	FMOD (ENSSVLG00005008105) #17	PRELP (ENSSVLG00005008083) #18	OPTC (ENSSVLG00005008040) #19	ATP2B4 (ENSSVLG00005007980) #20	LAX1 (ENSSVLG00005007924) #21	ZBED6 (ENSSVLG00005007904) #22	ENSSVLG00005007861 #23	SNRPE (ENSSVLG00005007786) ##24	ENSSVLG00005007769	ENSSVLG00005007750	SOX13 (ENSSVLG00005007665) #26	ETNK2 (ENSSVLG00005007611) #27	REN (ENSSVLG00005007539) #28	KISS1 (ENSSVLG00005007514)	GOLT1A (ENSSVLG00005007486) #29	PLEKHA6 (ENSSVLG00005007313) #30	PPP1R15B (ENSSVLG00005007196) #31	PIK3C2B (ENSSVLG00005007149) #32	MDM4 (ENSSVLG00005006908) #33	LRRN2 (ENSSVLG00005006839) #34	NFASC (ENSSVLG00005006491) #35
Marmotini	ANCESTRAL SPECIES	60	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147821
Marmotini_b	ANCESTRAL SPECIES	70	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00910000147821
Squirrel	MODERN SPECIES	167	CYB5R1 (ENSSTOG00000021865)	ENSSTOG00000028547 #7	ENSSTOG00000012466 #9	PPFIA4 (ENSSTOG00000020313) #10	MYOG (ENSSTOG00000028049) #11	ADORA1 (ENSSTOG00000021164) #12	MYBPH (ENSSTOG00000005228) #13	CHI3L1 (ENSSTOG00000015436) #14	CHIT1 (ENSSTOG00000015059) #15	BTG2 (ENSSTOG00000024859) #16	FMOD (ENSSTOG00000023921) #17	PRELP (ENSSTOG00000011558) #18	OPTC (ENSSTOG00000011562) #19	ATP2B4 (ENSSTOG00000010657) #20	LAX1 (ENSSTOG00000022601) #21	ZBED6 (ENSSTOG00000022677) #22	ENSSTOG00000000736 #23	ENSSTOG00000031197 ##24	SOX13 (ENSSTOG00000015089) #26	ETNK2 (ENSSTOG00000015115) #27	REN (ENSSTOG00000015124) #28	KISS1 (ENSSTOG00000034780)	GOLT1A (ENSSTOG00000012315) #29	PLEKHA6 (ENSSTOG00000012321) #30	PPP1R15B (ENSSTOG00000027617) #31	PIK3C2B (ENSSTOG00000004126) #32	MDM4 (ENSSTOG00000004184) #33
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Myomorpha	ANCESTRAL SPECIES	16	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Muroidea	ANCESTRAL SPECIES	9	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Muroidea_A	ANCESTRAL SPECIES	12	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Cricetidae	ANCESTRAL SPECIES	13	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Chinese hamster chok1gshd	MODERN SPECIES	2	Cyb5r1 (ENSCGRG00001024525)	Mgat4f (ENSCGRG00001004313) #7	Tmem183a (ENSCGRG00001008850) #9	Ppfia4 (ENSCGRG00001024386) #10	Myog (ENSCGRG00001024598) #11	Adora1 (ENSCGRG00001000698) #12	Mybph (ENSCGRG00001015181) #13	Chil1 (ENSCGRG00001022520) #14	Chit1 (ENSCGRG00001007003) #15	Btg2 (ENSCGRG00001018732) #16	Fmod (ENSCGRG00001015148) #17	Prelp (ENSCGRG00001015698) #18	Optc (ENSCGRG00001022912) #19	Atp2b4 (ENSCGRG00001011759) #20	Lax1 (ENSCGRG00001019553) #21	Zbed6 (ENSCGRG00001003149) #22	Zc3h11a (ENSCGRG00001014561) #23	Snrpe (ENSCGRG00001019074) ##24	Sox13 (ENSCGRG00001024218) #26	Etnk2 (ENSCGRG00001019568) #27	Ren1 (ENSCGRG00001009655) #28	ENSCGRG00001011869	Golt1a (ENSCGRG00001012446) #29	Plekha6 (ENSCGRG00001023579) #30	Ppp1r15b (ENSCGRG00001007710) #31	Pik3c2b (ENSCGRG00001024716) #32	Mdm4 (ENSCGRG00001004339) #33	Lrrn2 (ENSCGRG00001010870) #34	Nfasc (ENSCGRG00001010423) #35	Cntn2 (ENSCGRG00001000875) #36	Tmem81 (ENSCGRG00001003877) #37
Cricetidae_B	ANCESTRAL SPECIES	8	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Prairie vole	MODERN SPECIES	14	Adipor1 (ENSMOCG00000011542)	Cyb5r1 (ENSMOCG00000011285)	Mgat4f (ENSMOCG00000006511) #7	Tmem183a (ENSMOCG00000001009) #9	Ppfia4 (ENSMOCG00000023033) #10	Myog (ENSMOCG00000021956) #11	Adora1 (ENSMOCG00000017725) #12	Mybph (ENSMOCG00000016369) #13	Chil1 (ENSMOCG00000000618) #14	Btg2 (ENSMOCG00000017852) #16	Fmod (ENSMOCG00000015819) #17	Prelp (ENSMOCG00000012807) #18	Optc (ENSMOCG00000002786) #19	Atp2b4 (ENSMOCG00000001360) #20	Lax1 (ENSMOCG00000019077) #21	Zbed6 (ENSMOCG00000001415) #22	ENSMOCG00000018144 #23	Snrpe (ENSMOCG00000019341) ##24	Sox13 (ENSMOCG00000004872) #26	Etnk2 (ENSMOCG00000016784) #27	Ren1 (ENSMOCG00000012713) #28	Golt1a (ENSMOCG00000017873) #29	Plekha6 (ENSMOCG00000019638) #30	Ppp1r15b (ENSMOCG00000021507) #31	Pik3c2b (ENSMOCG00000019428) #32	Mdm4 (ENSMOCG00000002099) #33	Lrrn2 (ENSMOCG00000014938) #34	Nfasc (ENSMOCG00000001737) #35	ENSMOCG00000001856	Cntn2 (ENSMOCG00000020328) #36	Rbbp5 (ENSMOCG00000014868)
Northern American deer mouse	MODERN SPECIES	2	Cyb5r1 (ENSPEMG00000016852)	Mgat4f (ENSPEMG00000017545) #7	Tmem183a (ENSPEMG00000011541) #9	Ppfia4 (ENSPEMG00000008757) #10	Myog (ENSPEMG00000006258) #11	Adora1 (ENSPEMG00000031414) #12	Mybph (ENSPEMG00000018187) #13	Chil1 (ENSPEMG00000010614) #14	Chit1 (ENSPEMG00000001900) #15	Btg2 (ENSPEMG00000026893) #16	Fmod (ENSPEMG00000014900) #17	Prelp (ENSPEMG00000011488) #18	Optc (ENSPEMG00000001092) #19	Atp2b4 (ENSPEMG00000015469) #20	Lax1 (ENSPEMG00000025679) #21	Zbed6 (ENSPEMG00000025595) #22	ENSPEMG00000007494 #23	Snrpe (ENSPEMG00000008031) ##24	Sox13 (ENSPEMG00000011632) #26	Etnk2 (ENSPEMG00000001456) #27	Ren1 (ENSPEMG00000014347) #28	ENSPEMG00000027240	Golt1a (ENSPEMG00000007562) #29	Plekha6 (ENSPEMG00000000750) #30	Ppp1r15b (ENSPEMG00000010981) #31	Pik3c2b (ENSPEMG00000007478) #32	Mdm4 (ENSPEMG00000018483) #33	Lrrn2 (ENSPEMG00000010135) #34	Nfasc (ENSPEMG00000001323) #35	Cntn2 (ENSPEMG00000020849) #36	Tmem81 (ENSPEMG00000029756) #37
Murinae	ANCESTRAL SPECIES	11	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Mus	ANCESTRAL SPECIES	5	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000014507.b.a.b #29	ENSGT00390000008827	ENSGT00390000014507.b.a.a #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000014507.b.a.b #29	ENSGT00390000008827	ENSGT00390000014507.b.a.a #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b.a.a #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a.qb #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b.a.a #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a.qb #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
spretus	DUPLICATION
spretus	MODERN SPECIES		Cyb5r1 (MGP_SPRETEiJ_G0015428)	Mgat4f (MGP_SPRETEiJ_G0015427) #7	Tmem183a (MGP_SPRETEiJ_G0015426) #9	Ppfia4 (MGP_SPRETEiJ_G0015425) #10	Myog (MGP_SPRETEiJ_G0015424) #11	Adora1 (MGP_SPRETEiJ_G0015423) #12	Mybph (MGP_SPRETEiJ_G0015422) #13	Chil1 (MGP_SPRETEiJ_G0015421) #14	Chit1 (MGP_SPRETEiJ_G0015420) #15	Btg2 (MGP_SPRETEiJ_G0015419) #16	Fmod (MGP_SPRETEiJ_G0015418) #17	Prelp (MGP_SPRETEiJ_G0015417) #18	MGP_SPRETEiJ_G0015416 #19	Atp2b4 (MGP_SPRETEiJ_G0015415) #20	Lax1 (MGP_SPRETEiJ_G0015414) #21	MGP_SPRETEiJ_G0015413 #22	MGP_SPRETEiJ_G0015412 #22	Zc3h11a (MGP_SPRETEiJ_G0015411) #23	Snrpe (MGP_SPRETEiJ_G0015410) ##24	Sox13 (MGP_SPRETEiJ_G0015409) #26	Etnk2 (MGP_SPRETEiJ_G0015408) #27	MGP_SPRETEiJ_G0015407 #29	MGP_SPRETEiJ_G0015406	Golt1a (MGP_SPRETEiJ_G0015405) #29	Plekha6 (MGP_SPRETEiJ_G0015403) #30	Ppp1r15b (MGP_SPRETEiJ_G0015402) #31	Pik3c2b (MGP_SPRETEiJ_G0015401) #32	Mdm4 (MGP_SPRETEiJ_G0015400) #33	Lrrn2 (MGP_SPRETEiJ_G0015399) #34	Nfasc (MGP_SPRETEiJ_G0015398) #35	Cntn2 (MGP_SPRETEiJ_G0015397) #36
spretus	MODERN SPECIES		Mgat4f (MGP_SPRETEiJ_G0015427) #7	Tmem183a (MGP_SPRETEiJ_G0015426) #9	Ppfia4 (MGP_SPRETEiJ_G0015425) #10	Myog (MGP_SPRETEiJ_G0015424) #11	Adora1 (MGP_SPRETEiJ_G0015423) #12	Mybph (MGP_SPRETEiJ_G0015422) #13	Chil1 (MGP_SPRETEiJ_G0015421) #14	Chit1 (MGP_SPRETEiJ_G0015420) #15	Btg2 (MGP_SPRETEiJ_G0015419) #16	Fmod (MGP_SPRETEiJ_G0015418) #17	Prelp (MGP_SPRETEiJ_G0015417) #18	MGP_SPRETEiJ_G0015416 #19	Atp2b4 (MGP_SPRETEiJ_G0015415) #20	Lax1 (MGP_SPRETEiJ_G0015414) #21	MGP_SPRETEiJ_G0015413 #22	MGP_SPRETEiJ_G0015412 #22	Zc3h11a (MGP_SPRETEiJ_G0015411) #23	Snrpe (MGP_SPRETEiJ_G0015410) ##24	Sox13 (MGP_SPRETEiJ_G0015409) #26	Etnk2 (MGP_SPRETEiJ_G0015408) #27	MGP_SPRETEiJ_G0015407 #29	MGP_SPRETEiJ_G0015406	Golt1a (MGP_SPRETEiJ_G0015405) #29	Plekha6 (MGP_SPRETEiJ_G0015403) #30	Ppp1r15b (MGP_SPRETEiJ_G0015402) #31	Pik3c2b (MGP_SPRETEiJ_G0015401) #32	Mdm4 (MGP_SPRETEiJ_G0015400) #33	Lrrn2 (MGP_SPRETEiJ_G0015399) #34	Nfasc (MGP_SPRETEiJ_G0015398) #35	Cntn2 (MGP_SPRETEiJ_G0015397) #36	Tmem81 (MGP_SPRETEiJ_G0015396) #37
Steppe mouse	MODERN SPECIES	3299	ENSMSIG00000017789 #9	Mgat4f (ENSMSIG00000017814) #7	Ppfia4 (ENSMSIG00000017850) #10	Myog (ENSMSIG00000018017) #11	Adora1 (ENSMSIG00000018036) #12	Mybph (ENSMSIG00000018048) #13	Chil1 (ENSMSIG00000018094) #14	Chit1 (ENSMSIG00000018191) #15	ENSMSIG00000018348	Btg2 (ENSMSIG00000018371) #16	Fmod (ENSMSIG00000018385) #17	Prelp (ENSMSIG00000018392) #18	Optc (ENSMSIG00000018410) #19	Atp2b4 (ENSMSIG00000018529) #20	Lax1 (ENSMSIG00000018697) #21	Zbed6 (ENSMSIG00000018721) #22	Zc3h11a (ENSMSIG00000018739) #23	Snrpe (ENSMSIG00000018783) ##24	Sox13 (ENSMSIG00000018829) #26	ENSMSIG00000018952 #27
Mouse	MODERN SPECIES		Cyb5r1 (ENSMUSG00000026456)	Mgat4f (ENSMUSG00000050526) #7	Tmem183a (ENSMUSG00000042305) #9	Ppfia4 (ENSMUSG00000026458) #10	Myog (ENSMUSG00000026459) #11	Adora1 (ENSMUSG00000042429) #12	Mybph (ENSMUSG00000042451) #13	Chil1 (ENSMUSG00000064246) #14	Chit1 (ENSMUSG00000026450) #15	Btg2 (ENSMUSG00000020423) #16	Fmod (ENSMUSG00000041559) #17	Prelp (ENSMUSG00000041577) #18	Optc (ENSMUSG00000010311) #19	Atp2b4 (ENSMUSG00000026463) #20	Lax1 (ENSMUSG00000051998) #21	Zbed6 (ENSMUSG00000094410) #22	Zc3h11a (ENSMUSG00000102976) #23	Snrpe (ENSMUSG00000090553) ##24	Sox13 (ENSMUSG00000070643) #26	Etnk2 (ENSMUSG00000070644) #27	Ren1 (ENSMUSG00000070645) #28	Kiss1 (ENSMUSG00000116158)	Gm28040 (ENSMUSG00000098306)	Gm28040 (ENSMUSG00000115958)	Golt1a (ENSMUSG00000103421) #29	Plekha6 (ENSMUSG00000041757) #30	Ppp1r15b (ENSMUSG00000046062) #31	Pik3c2b (ENSMUSG00000026447) #32	Mdm4 (ENSMUSG00000054387) #33	Lrrn2 (ENSMUSG00000026443) #34	Nfasc (ENSMUSG00000026442) #35
Ryukyu mouse	DUPLICATION
Ryukyu mouse	MODERN SPECIES		Mgat4f (MGP_CAROLIEiJ_G0014620) #7	Tmem183a (MGP_CAROLIEiJ_G0014619) #9	Ppfia4 (MGP_CAROLIEiJ_G0014618) #10	Myog (MGP_CAROLIEiJ_G0014617) #11	Adora1 (MGP_CAROLIEiJ_G0014616) #12	Mybph (MGP_CAROLIEiJ_G0014615) #13	Chil1 (MGP_CAROLIEiJ_G0014614) #14	Chit1 (MGP_CAROLIEiJ_G0014613) #15	Btg2 (MGP_CAROLIEiJ_G0014612) #16	Fmod (MGP_CAROLIEiJ_G0014611) #17	Prelp (MGP_CAROLIEiJ_G0014610) #18	Optc (MGP_CAROLIEiJ_G0014609) #19	Atp2b4 (MGP_CAROLIEiJ_G0014608) #20	Lax1 (MGP_CAROLIEiJ_G0014607) #21	MGP_CAROLIEiJ_G0014606 #22	MGP_CAROLIEiJ_G0014605 #22	Zc3h11a (MGP_CAROLIEiJ_G0014604) #23	Snrpe (MGP_CAROLIEiJ_G0014603) ##24	Sox13 (MGP_CAROLIEiJ_G0014602) #26	Etnk2 (MGP_CAROLIEiJ_G0014601) #27	Ren1 (MGP_CAROLIEiJ_G0014600) #28	MGP_CAROLIEiJ_G0014599 #29	MGP_CAROLIEiJ_G0014598	Golt1a (MGP_CAROLIEiJ_G0014597) #29	Plekha6 (MGP_CAROLIEiJ_G0014596) #30	Ppp1r15b (MGP_CAROLIEiJ_G0014595) #31	Pik3c2b (MGP_CAROLIEiJ_G0014594) #32	Mdm4 (MGP_CAROLIEiJ_G0014593) #33	Lrrn2 (MGP_CAROLIEiJ_G0014592) #34	Nfasc (MGP_CAROLIEiJ_G0014591) #35	Cntn2 (MGP_CAROLIEiJ_G0014590) #36
Ryukyu mouse	MODERN SPECIES		Cyb5r1 (MGP_CAROLIEiJ_G0014621)	Mgat4f (MGP_CAROLIEiJ_G0014620) #7	Tmem183a (MGP_CAROLIEiJ_G0014619) #9	Ppfia4 (MGP_CAROLIEiJ_G0014618) #10	Myog (MGP_CAROLIEiJ_G0014617) #11	Adora1 (MGP_CAROLIEiJ_G0014616) #12	Mybph (MGP_CAROLIEiJ_G0014615) #13	Chil1 (MGP_CAROLIEiJ_G0014614) #14	Chit1 (MGP_CAROLIEiJ_G0014613) #15	Btg2 (MGP_CAROLIEiJ_G0014612) #16	Fmod (MGP_CAROLIEiJ_G0014611) #17	Prelp (MGP_CAROLIEiJ_G0014610) #18	Optc (MGP_CAROLIEiJ_G0014609) #19	Atp2b4 (MGP_CAROLIEiJ_G0014608) #20	Lax1 (MGP_CAROLIEiJ_G0014607) #21	MGP_CAROLIEiJ_G0014606 #22	MGP_CAROLIEiJ_G0014605 #22	Zc3h11a (MGP_CAROLIEiJ_G0014604) #23	Snrpe (MGP_CAROLIEiJ_G0014603) ##24	Sox13 (MGP_CAROLIEiJ_G0014602) #26	Etnk2 (MGP_CAROLIEiJ_G0014601) #27	Ren1 (MGP_CAROLIEiJ_G0014600) #28	MGP_CAROLIEiJ_G0014599 #29	MGP_CAROLIEiJ_G0014598	Golt1a (MGP_CAROLIEiJ_G0014597) #29	Plekha6 (MGP_CAROLIEiJ_G0014596) #30	Ppp1r15b (MGP_CAROLIEiJ_G0014595) #31	Pik3c2b (MGP_CAROLIEiJ_G0014594) #32	Mdm4 (MGP_CAROLIEiJ_G0014593) #33	Lrrn2 (MGP_CAROLIEiJ_G0014592) #34	Nfasc (MGP_CAROLIEiJ_G0014591) #35
Shrew mouse	DUPLICATION
Shrew mouse	MODERN SPECIES	18	Mgat4f (MGP_PahariEiJ_G0027856) #7	Tmem183a (MGP_PahariEiJ_G0027855) #9	Ppfia4 (MGP_PahariEiJ_G0027854) #10	Myog (MGP_PahariEiJ_G0027853) #11	Adora1 (MGP_PahariEiJ_G0027852) #12	Mybph (MGP_PahariEiJ_G0027851) #13	Chil1 (MGP_PahariEiJ_G0027850) #14	Chit1 (MGP_PahariEiJ_G0027849) #15	Btg2 (MGP_PahariEiJ_G0027848) #16	Fmod (MGP_PahariEiJ_G0027847) #17	Prelp (MGP_PahariEiJ_G0027846) #18	Optc (MGP_PahariEiJ_G0027845) #19	MGP_PahariEiJ_G0027844 #20	Lax1 (MGP_PahariEiJ_G0027843) #21	MGP_PahariEiJ_G0027842 #22	MGP_PahariEiJ_G0027841 #22	Zc3h11a (MGP_PahariEiJ_G0027840) #23	Snrpe (MGP_PahariEiJ_G0027839) ##24	Sox13 (MGP_PahariEiJ_G0027838) #26	Etnk2 (MGP_PahariEiJ_G0027837) #27	Ren1 (MGP_PahariEiJ_G0027836) #28	Golt1a (MGP_PahariEiJ_G0027835) #29	MGP_PahariEiJ_G0027834 #29	MGP_PahariEiJ_G0027833	Plekha6 (MGP_PahariEiJ_G0027832) #30	Ppp1r15b (MGP_PahariEiJ_G0027831) #31	Pik3c2b (MGP_PahariEiJ_G0027830) #32	Mdm4 (MGP_PahariEiJ_G0027829) #33	Lrrn2 (MGP_PahariEiJ_G0027828) #34	Nfasc (MGP_PahariEiJ_G0027827) #35	Cntn2 (MGP_PahariEiJ_G0027826) #36
Shrew mouse	MODERN SPECIES	18	Cyb5r1 (MGP_PahariEiJ_G0027857)	Mgat4f (MGP_PahariEiJ_G0027856) #7	Tmem183a (MGP_PahariEiJ_G0027855) #9	Ppfia4 (MGP_PahariEiJ_G0027854) #10	Myog (MGP_PahariEiJ_G0027853) #11	Adora1 (MGP_PahariEiJ_G0027852) #12	Mybph (MGP_PahariEiJ_G0027851) #13	Chil1 (MGP_PahariEiJ_G0027850) #14	Chit1 (MGP_PahariEiJ_G0027849) #15	Btg2 (MGP_PahariEiJ_G0027848) #16	Fmod (MGP_PahariEiJ_G0027847) #17	Prelp (MGP_PahariEiJ_G0027846) #18	Optc (MGP_PahariEiJ_G0027845) #19	MGP_PahariEiJ_G0027844 #20	Lax1 (MGP_PahariEiJ_G0027843) #21	MGP_PahariEiJ_G0027842 #22	MGP_PahariEiJ_G0027841 #22	Zc3h11a (MGP_PahariEiJ_G0027840) #23	Snrpe (MGP_PahariEiJ_G0027839) ##24	Sox13 (MGP_PahariEiJ_G0027838) #26	Etnk2 (MGP_PahariEiJ_G0027837) #27	Ren1 (MGP_PahariEiJ_G0027836) #28	Golt1a (MGP_PahariEiJ_G0027835) #29	MGP_PahariEiJ_G0027834 #29	MGP_PahariEiJ_G0027833	Plekha6 (MGP_PahariEiJ_G0027832) #30	Ppp1r15b (MGP_PahariEiJ_G0027831) #31	Pik3c2b (MGP_PahariEiJ_G0027830) #32	Mdm4 (MGP_PahariEiJ_G0027829) #33	Lrrn2 (MGP_PahariEiJ_G0027828) #34	Nfasc (MGP_PahariEiJ_G0027827) #35
Rat	MODERN SPECIES	4	Cyb5r1 (ENSRNOG00000003973)	Mgat4e-like (ENSRNOG00000027702) #7	Tmem183a (ENSRNOG00000003594) #9	Ppfia4 (ENSRNOG00000003494) #10	Myog (ENSRNOG00000030743) #11	Adora1 (ENSRNOG00000003442) #12	Mybph (ENSRNOG00000003336) #13	Chi3l1 (ENSRNOG00000053272) #14	Chit1 (ENSRNOG00000028072) #15	Btg2 (ENSRNOG00000003300) #16	Fmod (ENSRNOG00000003183) #17	Prelp (ENSRNOG00000003120) #18	Optc (ENSRNOG00000003059) #19	Atp2b4 (ENSRNOG00000003031) #20	Lax1 (ENSRNOG00000028250) #21	Zbed6 (ENSRNOG00000053210) #22	Snrpe (ENSRNOG00000067587) #24	LOC498231 (ENSRNOG00000029418)	Sox13 (ENSRNOG00000028353) #26	Etnk2 (ENSRNOG00000028368) #27	Ren (ENSRNOG00000002937) #28	Kiss1 (ENSRNOG00000047481)	Golt1a (ENSRNOG00000002936) #29	Plekha6 (ENSRNOG00000002907) #30	Ppp1r15b (ENSRNOG00000028493) #31	Pik3c2b (ENSRNOG00000029938) #32	Mdm4 (ENSRNOG00000009696) #33	Lrrn2 (ENSRNOG00000009691) #34	Nfasc (ENSRNOG00000030515) #35	Cntn2 (ENSRNOG00000009033) #36	Tmem81 (ENSRNOG00000028752) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	699	Adipor1 (ENSNGAG00000022932)	Cyb5r1 (ENSNGAG00000012253)	Tmem183a (ENSNGAG00000023196) #9	ENSNGAG00000023538	Ppfia4 (ENSNGAG00000024254) #10	Myog (ENSNGAG00000010861) #11	Adora1 (ENSNGAG00000023414) #12	Mybph (ENSNGAG00000014067) #13	Chil1 (ENSNGAG00000023060) #14	Chit1 (ENSNGAG00000021293) #15	Btg2 (ENSNGAG00000022776) #16	Fmod (ENSNGAG00000013706) #17	Prelp (ENSNGAG00000014170) #18	Atp2b4 (ENSNGAG00000005391) #20	Lax1 (ENSNGAG00000021147) #21	Zbed6 (ENSNGAG00000014592) #22	ENSNGAG00000001706 #23	Snrpe (ENSNGAG00000021588) ##24	Sox13 (ENSNGAG00000010564) #26	Etnk2 (ENSNGAG00000022245) #27	Ren1 (ENSNGAG00000022621) #28	ENSNGAG00000022299	Golt1a (ENSNGAG00000019870) #29	Plekha6 (ENSNGAG00000023899) #30	Ppp1r15b (ENSNGAG00000001242) #31	Pik3c2b (ENSNGAG00000008939) #32	Mdm4 (ENSNGAG00000012344) #33	Lrrn2 (ENSNGAG00000001325) #34
Lesser Egyptian jerboa	MODERN SPECIES	102														Fa2h (ENSJJAG00000018811)	Rfwd3 (ENSJJAG00000009967)	Zbed6 (ENSJJAG00000001904) #22	ENSJJAG00000019323 #23	Etnk2 (ENSJJAG00000000142) #27	Ren1 (ENSJJAG00000021360) #28	Golt1a (ENSJJAG00000016699) #29	ENSJJAG00000001042	Ppp1r15b (ENSJJAG00000013562) #31	Pik3c2b (ENSJJAG00000013864) #32	Mdm4 (ENSJJAG00000017144) #33	Lrrn2 (ENSJJAG00000021288) #34	Nfasc (ENSJJAG00000022015) #35	Cntn2 (ENSJJAG00000012638) #36	Tmem81 (ENSJJAG00000002040) #37	Rbbp5 (ENSJJAG00000021045)	Dstyk (ENSJJAG00000013714)	Tmcc2 (ENSJJAG00000024293)
Kangaroo rat	MODERN SPECIES	354	Cyb5r1 (ENSDORG00000007313)	ENSDORG00000025988 #7	Tmem183a (ENSDORG00000016500) #9	Ppfia4 (ENSDORG00000016503) #10	Myog (ENSDORG00000029186) #11	Adora1 (ENSDORG00000027122) #12	Mybph (ENSDORG00000002129) #13	Chil1 (ENSDORG00000002127) #14	Chit1 (ENSDORG00000010764) #15	Btg2 (ENSDORG00000025474) #16	Fmod (ENSDORG00000029378) #17	Prelp (ENSDORG00000003488) #18	Optc (ENSDORG00000003489) #19	Atp2b4 (ENSDORG00000014618) #20	ENSDORG00000014621 #21	Zbed6 (ENSDORG00000025233) #22	ENSDORG00000003463 #23	ENSDORG00000023819 #24	Sox13 (ENSDORG00000003409) #26	Etnk2 (ENSDORG00000003410) #27	Ren1 (ENSDORG00000003412) #28	ENSDORG00000003414	Golt1a (ENSDORG00000003415) #29	Plekha6 (ENSDORG00000003416) #30	Ppp1r15b (ENSDORG00000028377) #31	Pik3c2b (ENSDORG00000006835) #32	ENSDORG00000023943	Mdm4 (ENSDORG00000006873) #33	Lrrn2 (ENSDORG00000008526) #34	Nfasc (ENSDORG00000011731) #35	Cntn2 (ENSDORG00000014240) #36
Laurasiatheria	ANCESTRAL SPECIES	25	ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147464
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147464
Artiodactyla	ANCESTRAL SPECIES			ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35
Suina	ANCESTRAL SPECIES	15				ENSGT00940000162280	ENSGT00940000161339	ENSGT00940000162771.b	ENSGT00940000161099	ENSGT00940000160945	ENSGT00940000160256.b.c	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Pig	MODERN SPECIES	17	ENSSSCG00000059870	GUCY1A2 (ENSSSCG00000024613)	ENSSSCG00000046596	MROH9 (ENSSSCG00000026160)	FMO3 (ENSSSCG00000023472)	ENSSSCG00000022759	FMO2 (ENSSSCG00000015267)	FMO1 (ENSSSCG00000015268)	FMO4 (ENSSSCG00000015266)	BTG2 (ENSSSCG00000055218) #16	FMOD (ENSSSCG00000015270) #17	PRELP (ENSSSCG00000015271) #18	OPTC (ENSSSCG00000015272) #19	ATP2B4 (ENSSSCG00000015273) #20	LAX1 (ENSSSCG00000033768) #21	ZBED6 (ENSSSCG00000059016) #22	ENSSSCG00000059104	ENSSSCG00000028035 #23	SNRPE (ENSSSCG00000023562) ##24	SOX13 (ENSSSCG00000015277) #26	ETNK2 (ENSSSCG00000015276) #27	REN (ENSSSCG00000031235) #28	GOLT1A (ENSSSCG00000038350) #29	PLEKHA6 (ENSSSCG00000015281) #30	PPP1R15B (ENSSSCG00000015282) #31	PIK3C2B (ENSSSCG00000015283) #32	MDM4 (ENSSSCG00000015284) #33	LRRN2 (ENSSSCG00000015285) #34	ENSSSCG00000060160	NFASC (ENSSSCG00000022951) #35	CNTN2 (ENSSSCG00000040824) #36
Artiodactyla_a	ANCESTRAL SPECIES				ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35
Artiodactyla_b	ANCESTRAL SPECIES				ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT01070000254179	ENSGT00390000012818.o.a.a.a.a ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33
Cetacea	ANCESTRAL SPECIES				ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT01070000254179	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35
Odontoceti	ANCESTRAL SPECIES				ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36
Odontoceti_a	ANCESTRAL SPECIES				ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00950000183122.A	ENSGT00940000156661	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT01010000228940	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36
Monodontidae	ANCESTRAL SPECIES		ENSGT00940000156661	ENSGT00940000156422.z	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT01010000228940	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36
Beluga whale	MODERN SPECIES	27	ZNF496 (ENSDLEG00000006189)	NLRP3 (ENSDLEG00000006183)	TMEM183A (ENSDLEG00000006175) #9	PPFIA4 (ENSDLEG00000006102) #10	MYOG (ENSDLEG00000006080) #11	ADORA1 (ENSDLEG00000006076) #12	MYBPH (ENSDLEG00000006056) #13	CHI3L1 (ENSDLEG00000006019) #14	ENSDLEG00000006009	BTG2 (ENSDLEG00000006002) #16	FMOD (ENSDLEG00000005997) #17	PRELP (ENSDLEG00000005993) #18	OPTC (ENSDLEG00000005985) #19	ATP2B4 (ENSDLEG00000005910) #20	LAX1 (ENSDLEG00000005876) #21	ZBED6 (ENSDLEG00000005867) #22	ENSDLEG00000005830 #23	SNRPE (ENSDLEG00000005818) ##24	SOX13 (ENSDLEG00000005766) #26	ETNK2 (ENSDLEG00000005755) #27	REN (ENSDLEG00000005739) #28	KISS1 (ENSDLEG00000005731)	GOLT1A (ENSDLEG00000005723) #29	PLEKHA6 (ENSDLEG00000005576) #30	ENSDLEG00000005543	PPP1R15B (ENSDLEG00000005540) #31	PIK3C2B (ENSDLEG00000005513) #32	MDM4 (ENSDLEG00000005501) #33	LRRN2 (ENSDLEG00000005496) #34	NFASC (ENSDLEG00000004530) #35	CNTN2 (ENSDLEG00000004321) #36
Narwhal	MODERN SPECIES	304	RGS7 (ENSMMNG00015003213)	ENSMMNG00015003390	TMEM183A (ENSMMNG00015003415) #9	PPFIA4 (ENSMMNG00015003458) #10	MYOG (ENSMMNG00015003492) #11	ADORA1 (ENSMMNG00015003513) #12	MYBPH (ENSMMNG00015003541) #13	CHI3L1 (ENSMMNG00015003658) #14	CHIT1 (ENSMMNG00015003706) #15	BTG2 (ENSMMNG00015003738) #16	FMOD (ENSMMNG00015003756) #17	PRELP (ENSMMNG00015003769) #18	OPTC (ENSMMNG00015003805) #19	ATP2B4 (ENSMMNG00015003852) #20	LAX1 (ENSMMNG00015003899) #21	ZBED6 (ENSMMNG00015003917) #22	ENSMMNG00015003934 #23	ENSMMNG00015003960	ENSMMNG00015003968 ##24	ENSMMNG00015003981	SOX13 (ENSMMNG00015003993) #26	ETNK2 (ENSMMNG00015004027) #27	REN (ENSMMNG00015004053) #28	KISS1 (ENSMMNG00015004069)	GOLT1A (ENSMMNG00015004087) #29	PLEKHA6 (ENSMMNG00015004145) #30	PPP1R15B (ENSMMNG00015004234) #31	ENSMMNG00015004243	PIK3C2B (ENSMMNG00015004268) #32	MDM4 (ENSMMNG00015004341) #33	LRRN2 (ENSMMNG00015004385) #34
Sperm whale	MODERN SPECIES	15	MYOC (ENSPCTG00005009661)	ENSPCTG00005009616	PRRC2C (ENSPCTG00005008627)	FMO4 (ENSPCTG00005020482)	ENSPCTG00005020450	FMO2 (ENSPCTG00005020397)	TMEM183A (ENSPCTG00005020353) #9	PPFIA4 (ENSPCTG00005019711) #10	MYOG (ENSPCTG00005019656) #11	ENSPCTG00005019637 #12	CHI3L1 (ENSPCTG00005019554) #14	BTG2 (ENSPCTG00005019521) #16	FMOD (ENSPCTG00005019485) #17	ATP2B4 (ENSPCTG00005019393) #20	LAX1 (ENSPCTG00005019329) #21	ZBED6 (ENSPCTG00005019322) #22	ZC3H11A (ENSPCTG00005019261) #23	SNRPE (ENSPCTG00005019205) ##24	SOX13 (ENSPCTG00005019092) #26	ENSPCTG00005019063	ENSPCTG00005019027 #27	ENSPCTG00005018991 #30	PPP1R15B (ENSPCTG00005018955) #31	PIK3C2B (ENSPCTG00005018283) #32	MDM4 (ENSPCTG00005017987) #33	LRRN2 (ENSPCTG00005017938) #34	ENSPCTG00005017871	NFASC (ENSPCTG00005017294) #35	CNTN2 (ENSPCTG00005017016) #36	TMEM81 (ENSPCTG00005016995) #37	RBBP5 (ENSPCTG00005016936)
Pecora	ANCESTRAL SPECIES	22				ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT01070000254179	ENSGT00390000012818.o.a.a.a.a ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33
Percora_a	ANCESTRAL SPECIES	15				ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT01070000254179	ENSGT00390000012818.o.a.a.a.a ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33
Bovidae	ANCESTRAL SPECIES	15				ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT01070000254179	ENSGT00390000012818.o.a.a.a.a ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33
Bovinae	ANCESTRAL SPECIES	12	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01010000222906.f	ENSGT00390000004755.sb.b	ENSGT00390000005568.gb.b.a.a	ENSGT01100000264093	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT01070000254179	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a.u #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35
American bison	MODERN SPECIES	3252	MYOG (ENSBBBG00000017504) #11	ENSBBBG00000017492	ENSBBBG00000017490	ENSBBBG00000007948	ENSBBBG00000017482	ENSBBBG00000017467 #12	ENSBBBG00000017457 #12	MYBPH (ENSBBBG00000006776) #13	CHI3L1 (ENSBBBG00000004313) #14	BTG2 (ENSBBBG00000017412) #16	FMOD (ENSBBBG00000017404) #17	PRELP (ENSBBBG00000008600) #18	OPTC (ENSBBBG00000017375) #19	ATP2B4 (ENSBBBG00000007498) #20	LAX1 (ENSBBBG00000004262) #21	ZBED6 (ENSBBBG00000017218) #22	ENSBBBG00000017210 #23	ENSBBBG00000017110	SNRPE (ENSBBBG00000017104) ##24	ENSBBBG00000017089	SOX13 (ENSBBBG00000017084) #26	ENSBBBG00000017052 #27	ENSBBBG00000017041 #27	REN (ENSBBBG00000017030) #28	ENSBBBG00000017012	GOLT1A (ENSBBBG00000016995) #29	PLEKHA6 (ENSBBBG00000004202) #30	PPP1R15B (ENSBBBG00000007662) #31	PIK3C2B (ENSBBBG00000006769) #32	ENSBBBG00000016701 #33	LRRN2 (ENSBBBG00000008377) #34
Bos	ANCESTRAL SPECIES	12	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01010000222906.f	ENSGT00390000004755.sb.b	ENSGT00390000005568.gb.b.a.a	ENSGT01100000264093	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a.u #33	ENSGT00940000161204 #34	ENSGT00940000157024.g.b #35	ENSGT00940000159193 #36
Bos_a	ANCESTRAL SPECIES	58	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01010000222906.f	ENSGT00390000004755.sb.b	ENSGT00390000005568.gb.b.a.a	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.a.f ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a.u #33	ENSGT00940000161204 #34	ENSGT00940000157024.g.b #35	ENSGT00940000157024.h #35
Domestic yak	MODERN SPECIES	5	TMEM183A (ENSBGRG00000026236) #9	PPFIA4 (ENSBGRG00000026254) #10	MYOG (ENSBGRG00000026269) #11	ENSBGRG00000026271	ENSBGRG00000026277	ENSBGRG00000026283	ADORA1 (ENSBGRG00000026296) #12	MYBPH (ENSBGRG00000026302) #13	CHI3L1 (ENSBGRG00000026316) #14	BTG2 (ENSBGRG00000026320) #16	FMOD (ENSBGRG00000026323) #17	PRELP (ENSBGRG00000007735) #18	OPTC (ENSBGRG00000007805) #19	ATP2B4 (ENSBGRG00000007893) #20	LAX1 (ENSBGRG00000008055) #21	ZBED6 (ENSBGRG00000008085) #22	ENSBGRG00000008107 #23	ENSBGRG00000008286	ENSBGRG00000008312 ##24	SOX13 (ENSBGRG00000008403) #26	ETNK2 (ENSBGRG00000008541) #27	REN (ENSBGRG00000008588) #28	ENSBGRG00000008741	ENSBGRG00000008782 #29	PLEKHA6 (ENSBGRG00000008896) #30	PPP1R15B (ENSBGRG00000009635) #31	PIK3C2B (ENSBGRG00000009666) #32	MDM4 (ENSBGRG00000009887) #33	LRRN2 (ENSBGRG00000010207) #34	ENSBGRG00000010225	ENSBGRG00000010247
Caprinae	ANCESTRAL SPECIES	12				ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063.a #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.a ##24	ENSGT00940000158759 #26	ENSGT00910000147945	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34
Goat	MODERN SPECIES	7	ENSCHIG00000002879	ENSCHIG00000014347	TMEM183A (ENSCHIG00000019808) #9	PPFIA4 (ENSCHIG00000011499) #10	MYOG (ENSCHIG00000021331) #11	ADORA1 (ENSCHIG00000010182) #12	MYBPH (ENSCHIG00000017519) #13	CHI3L1 (ENSCHIG00000003384) #14	BTG2 (ENSCHIG00000017484) #16	FMOD (ENSCHIG00000026263) #17	PRELP (ENSCHIG00000015209) #18	OPTC (ENSCHIG00000022869) #19	ENSCHIG00000011811	ENSCHIG00000023819 #21	ENSCHIG00000019212 #20	ZBED6 (ENSCHIG00000011089) #22	ENSCHIG00000012149 #23	SNRPE (ENSCHIG00000024013) ##24	SOX13 (ENSCHIG00000012959) #26	ENSCHIG00000018181	ETNK2 (ENSCHIG00000004048) #27	REN (ENSCHIG00000015702) #28	KISS1 (ENSCHIG00000024611)	GOLT1A (ENSCHIG00000013932) #29	PLEKHA6 (ENSCHIG00000021840) #30	PPP1R15B (ENSCHIG00000013049) #31	PIK3C2B (ENSCHIG00000021981) #32	MDM4 (ENSCHIG00000010343) #33	LRRN2 (ENSCHIG00000008109) #34	NFASC (ENSCHIG00000011664) #35	CNTN2 (ENSCHIG00000017645) #36
Siberian musk deer	MODERN SPECIES	123	ENSMMSG00000002339	ENSMMSG00000002349	TMEM183A (ENSMMSG00000002361) #9	PPFIA4 (ENSMMSG00000002394) #10	MYOG (ENSMMSG00000002431) #11	ADORA1 (ENSMMSG00000002460) #12	MYBPH (ENSMMSG00000002501) #13	CHI3L1 (ENSMMSG00000002538) #14	ENSMMSG00000002558	BTG2 (ENSMMSG00000002581) #16	FMOD (ENSMMSG00000002597) #17	PRELP (ENSMMSG00000002612) #18	OPTC (ENSMMSG00000002629) #19	ATP2B4 (ENSMMSG00000002663) #20	LAX1 (ENSMMSG00000002752) #21	ZBED6 (ENSMMSG00000002768) #22	ENSMMSG00000002783 #23	SNRPE (ENSMMSG00000002813) ##24	ENSMMSG00000002836	SOX13 (ENSMMSG00000002897) #26	ETNK2 (ENSMMSG00000003432) #27	REN (ENSMMSG00000003452) #28	KISS1 (ENSMMSG00000003475)	GOLT1A (ENSMMSG00000003486) #29	PLEKHA6 (ENSMMSG00000003529) #30	ENSMMSG00000003648	PPP1R15B (ENSMMSG00000003658) #31	PIK3C2B (ENSMMSG00000003699) #32	MDM4 (ENSMMSG00000003801) #33	ENSMMSG00000004036	AVPR1B (ENSMMSG00000004045)
Yarkand deer	MODERN SPECIES	5					TMEM183A (ENSCHYG00000008917) #9	PPFIA4 (ENSCHYG00000009063) #10	MYOG (ENSCHYG00000009462) #11	ADORA1 (ENSCHYG00000009533) #12	MYBPH (ENSCHYG00000009685) #13	BTG2 (ENSCHYG00000010182) #16	FMOD (ENSCHYG00000010210) #17	PRELP (ENSCHYG00000010271) #18	OPTC (ENSCHYG00000010312) #19	ATP2B4 (ENSCHYG00000010396) #20	LAX1 (ENSCHYG00000010802) #21	ZBED6 (ENSCHYG00000010836) #22	ENSCHYG00000010851 #23	ENSCHYG00000010985	ENSCHYG00000011006	ENSCHYG00000011037 #24	SOX13 (ENSCHYG00000011156) #26	ETNK2 (ENSCHYG00000011580) #27	REN (ENSCHYG00000011652) #28	KISS1 (ENSCHYG00000011702)	GOLT1A (ENSCHYG00000011765) #29	PLEKHA6 (ENSCHYG00000011915) #30	PPP1R15B (ENSCHYG00000013232) #31	PIK3C2B (ENSCHYG00000013288) #32	MDM4 (ENSCHYG00000013701) #33	LRRN2 (ENSCHYG00000015210) #34	ENSCHYG00000015237
Camelidae	ANCESTRAL SPECIES	52			ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Arabian camel	MODERN SPECIES	15		TMEM183A (ENSCDRG00005022083) #9	PPFIA4 (ENSCDRG00005022075) #10	MYOG (ENSCDRG00005022070) #11	ADORA1 (ENSCDRG00005022066) #12	MYBPH (ENSCDRG00005022060) #13	CHI3L1 (ENSCDRG00005022058) #14	CHIT1 (ENSCDRG00005022056) #15	BTG2 (ENSCDRG00005022052) #16	FMOD (ENSCDRG00005022049) #17	PRELP (ENSCDRG00005022045) #18	OPTC (ENSCDRG00005022043) #19	ATP2B4 (ENSCDRG00005017535) #20	ENSCDRG00005016733	LAX1 (ENSCDRG00005016704) #21	ZBED6 (ENSCDRG00005016653) #22	ENSCDRG00005016588 #23	ENSCDRG00005016547 ##24	ENSCDRG00005016514	SOX13 (ENSCDRG00005016406) #26	ETNK2 (ENSCDRG00005016344) #27	REN (ENSCDRG00005016286) #28	KISS1 (ENSCDRG00005016261)	GOLT1A (ENSCDRG00005016220) #29	PLEKHA6 (ENSCDRG00005015653) #30	PPP1R15B (ENSCDRG00005015580) #31	PIK3C2B (ENSCDRG00005015375) #32	MDM4 (ENSCDRG00005015050) #33	LRRN2 (ENSCDRG00005014993) #34	NFASC (ENSCDRG00005013477) #35	CNTN2 (ENSCDRG00005013191) #36
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.b #24	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00390000012818.p ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34
Carnivora	ANCESTRAL SPECIES	14	ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.p ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147464	ENSGT00940000157024 #35	ENSGT00940000159193 #36
Caniformia	ANCESTRAL SPECIES	10	ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.p ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147464	ENSGT00940000157024 #35	ENSGT00940000159193 #36
Caniformia_b	ANCESTRAL SPECIES	8	ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.b #24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147464	ENSGT00940000157024 #35	ENSGT00940000159193 #36
Ursidae	ANCESTRAL SPECIES	4	ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT01010000222851.f	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147464	ENSGT00940000157024 #35
Ursus	ANCESTRAL SPECIES	42	ENSGT00940000163241 #7	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147464	ENSGT00940000157024 #35	ENSGT00940000159193 #36
American black bear	MODERN SPECIES	141			TMEM183A (ENSUAMG00000006501) #9	PPFIA4 (ENSUAMG00000006464) #10	MYOG (ENSUAMG00000006448) #11	ADORA1 (ENSUAMG00000006447) #12	MYBPH (ENSUAMG00000006439) #13	CHI3L1 (ENSUAMG00000006418) #14	CHIT1 (ENSUAMG00000006412) #15	BTG2 (ENSUAMG00000006408) #16	FMOD (ENSUAMG00000006406) #17	PRELP (ENSUAMG00000006404) #18	OPTC (ENSUAMG00000006402) #19	ATP2B4 (ENSUAMG00000005678) #20	LAX1 (ENSUAMG00000005645) #21	ZBED6 (ENSUAMG00000005643) #22	ENSUAMG00000005641 #23
Mustelinae	ANCESTRAL SPECIES	48	ENSGT00940000160784	ENSGT00940000163962 #8	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.b #24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147464	ENSGT00940000157024 #35	ENSGT00940000159193 #36
Ferret	MODERN SPECIES	215	ENSMPUG00000011269 #8	TMEM183A (ENSMPUG00000011275) #9	PPFIA4 (ENSMPUG00000011285) #10	MYOG (ENSMPUG00000011508) #11	ADORA1 (ENSMPUG00000011510) #12	MYBPH (ENSMPUG00000011512) #13	CHI3L1 (ENSMPUG00000011520) #14	CHIT1 (ENSMPUG00000011554) #15	BTG2 (ENSMPUG00000011561) #16	FMOD (ENSMPUG00000011566) #17	PRELP (ENSMPUG00000011571) #18	OPTC (ENSMPUG00000011577) #19	ENSMPUG00000011609	ATP2B4 (ENSMPUG00000011614) #20	LAX1 (ENSMPUG00000011624) #21	ZBED6 (ENSMPUG00000019262) #22	ENSMPUG00000011630 #23	ENSMPUG00000011642 #24	SOX13 (ENSMPUG00000011648) #26	ETNK2 (ENSMPUG00000011658) #27	REN (ENSMPUG00000011668) #28	GOLT1A (ENSMPUG00000011678) #29	PLEKHA6 (ENSMPUG00000011683) #30	ENSMPUG00000011694	PPP1R15B (ENSMPUG00000011698) #31	PIK3C2B (ENSMPUG00000011699) #32	MDM4 (ENSMPUG00000011721) #33	LRRN2 (ENSMPUG00000019264) #34	NFASC (ENSMPUG00000011730) #35	CNTN2 (ENSMPUG00000011745) #36	TMEM81 (ENSMPUG00000019268) #37
Canidae	ANCESTRAL SPECIES	36										ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.p ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147821	ENSGT00940000157024 #35	ENSGT00940000159193 #36
Canis_lupus	ANCESTRAL SPECIES	33										ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.p ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147821	ENSGT00390000012979.z	ENSGT00940000157024 #35
Dingo	MODERN SPECIES	275										BTG2 (ENSCAFG00020012424) #16	FMOD (ENSCAFG00020012423) #17	PRELP (ENSCAFG00020012419) #18	OPTC (ENSCAFG00020012418) #19	ATP2B4 (ENSCAFG00020006918) #20	LAX1 (ENSCAFG00020006750) #21	ZBED6 (ENSCAFG00020006740) #22	ENSCAFG00020006738 #23	ENSCAFG00020006733 ##24	SOX13 (ENSCAFG00020006722) #26	ETNK2 (ENSCAFG00020006710) #27	REN (ENSCAFG00020006703) #28	ENSCAFG00020006699	GOLT1A (ENSCAFG00020006691) #29	PLEKHA6 (ENSCAFG00020006648) #30	PPP1R15B (ENSCAFG00020006647) #31	PIK3C2B (ENSCAFG00020006011) #32	ENSCAFG00020005988 #33	MDM4 (ENSCAFG00020005984) #33	LRRN2 (ENSCAFG00020005983) #34	ENSCAFG00020005980	ENSCAFG00020005976
Dog	MODERN SPECIES	31									BTG2 (ENSCAFG00845019253) #16	FMOD (ENSCAFG00845019303) #17	PRELP (ENSCAFG00845019335) #18	OPTC (ENSCAFG00845019376) #19	ATP2B4 (ENSCAFG00845019471) #20	LAX1 (ENSCAFG00845019734) #21	ZC3H11A (ENSCAFG00845019821) #23	ZBED6 (ENSCAFG00845020206) #22	SNRPE (ENSCAFG00845020260) ##24	SOX13 (ENSCAFG00845020373) #26	ETNK2 (ENSCAFG00845020664) #27	REN (ENSCAFG00845020764) #28	KISS1 (ENSCAFG00845020866)	GOLT1A (ENSCAFG00845020910) #29	PLEKHA6 (ENSCAFG00845021325) #30	PPP1R15B (ENSCAFG00845022954) #31	PIK3C2B (ENSCAFG00845023047) #32	MDM4 (ENSCAFG00845023369) #33	ENSCAFG00845023653	ENSCAFG00845023669	NFASC (ENSCAFG00845023882) #35	CNTN2 (ENSCAFG00845025464) #36	TMEM81 (ENSCAFG00845025594) #37
Red fox	MODERN SPECIES	8	NLRP6 (ENSVVUG00000016911)	ENSVVUG00000016908	PSMD13 (ENSVVUG00000015139)	SIRT3 (ENSVVUG00000015096)	RIC8A (ENSVVUG00000015090)	BET1L (ENSVVUG00000015088)	ODF3 (ENSVVUG00000015084)	SCGB1C1 (ENSVVUG00000015081)	ENSVVUG00000015078	BTG2 (ENSVVUG00000015067) #16	FMOD (ENSVVUG00000015065) #17	PRELP (ENSVVUG00000015047) #18	OPTC (ENSVVUG00000015042) #19	ATP2B4 (ENSVVUG00000015022) #20	LAX1 (ENSVVUG00000015015) #21	ZBED6 (ENSVVUG00000014998) #22	ZC3H11A (ENSVVUG00000014990) #23	SNRPE (ENSVVUG00000014984) ##24	SOX13 (ENSVVUG00000014945) #26	ETNK2 (ENSVVUG00000014926) #27	REN (ENSVVUG00000014921) #28	ENSVVUG00000014920	GOLT1A (ENSVVUG00000014919) #29	PLEKHA6 (ENSVVUG00000014897) #30	PPP1R15B (ENSVVUG00000014893) #31	ENSVVUG00000014892	PIK3C2B (ENSVVUG00000014869) #32	MDM4 (ENSVVUG00000014855) #33	LRRN2 (ENSVVUG00000014853) #34	ENSVVUG00000014852	ENSVVUG00000014851
Felidae	ANCESTRAL SPECIES	11	ENSGT00940000154563	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a.e #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.p ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147464	ENSGT00940000157024 #35	ENSGT00940000159193 #36
Panthera	ANCESTRAL SPECIES	19	ENSGT00940000154563	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a.e #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT01010000222851	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00950000182891.a.a.b.a.a.a.b.a.a	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147464
Panthera_a	ANCESTRAL SPECIES	19	ENSGT00940000154563	ENSGT00940000160784	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a.e #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00950000182891.a.a.b.a.a.a.b.a.a	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147464	ENSGT00940000157024 #35
lion	MODERN SPECIES	17	CYB5R1 (ENSPLOG00000020380)	ENSPLOG00000020400 #7	TMEM183A (ENSPLOG00000020412) #9	PPFIA4 (ENSPLOG00000020467) #10	MYOG (ENSPLOG00000020619) #11	ENSPLOG00000020639 #12	CHI3L1 (ENSPLOG00000020758) #14	CHIT1 (ENSPLOG00000020814) #15	ENSPLOG00000020831	BTG2 (ENSPLOG00000020849) #16	FMOD (ENSPLOG00000020864) #17	PRELP (ENSPLOG00000020882) #18	OPTC (ENSPLOG00000020899) #19	ATP2B4 (ENSPLOG00000020956) #20	LAX1 (ENSPLOG00000021029) #21	ZBED6 (ENSPLOG00000021050) #22	ENSPLOG00000021070 #23	SNRPE (ENSPLOG00000021120) ##24	ENSPLOG00000021155	SOX13 (ENSPLOG00000021170) #26	ETNK2 (ENSPLOG00000021221) #27	REN (ENSPLOG00000021270) #28	KISS1 (ENSPLOG00000021301)	GOLT1A (ENSPLOG00000021315) #29	PLEKHA6 (ENSPLOG00000021344) #30	PPP1R15B (ENSPLOG00000021377) #31	PIK3C2B (ENSPLOG00000021402) #32	MDM4 (ENSPLOG00000021490) #33	LRRN2 (ENSPLOG00000021562) #34	ENSPLOG00000021572	NFASC (ENSPLOG00000021662) #35
leopard	MODERN SPECIES	4	ENSPPRG00000024097 #9	ENSPPRG00000024154 #10	ENSPPRG00000024388 #10	ENSPPRG00000024457 ##10	MYOG (ENSPPRG00000024546) #11	ADORA1 (ENSPPRG00000024577) #12	CHI3L1 (ENSPPRG00000024668) #14	CHIT1 (ENSPPRG00000024703) #15	ENSPPRG00000024734	BTG2 (ENSPPRG00000024775) #16	FMOD (ENSPPRG00000024787) #17	PRELP (ENSPPRG00000024788) #18	OPTC (ENSPPRG00000024815) #19	ATP2B4 (ENSPPRG00000024831) #20	LAX1 (ENSPPRG00000024884) #21	ZBED6 (ENSPPRG00000020731) #22	ENSPPRG00000024904 #23	ENSPPRG00000024930	ENSPPRG00000024940 ##24	ENSPPRG00000020723	SOX13 (ENSPPRG00000024960) #26	ETNK2 (ENSPPRG00000024969) #27	REN (ENSPPRG00000024991) #28	KISS1 (ENSPPRG00000025000)	GOLT1A (ENSPPRG00000025006) #29	PLEKHA6 (ENSPPRG00000025018) #30	PPP1R15B (ENSPPRG00000025042) #31	PIK3C2B (ENSPPRG00000025053) #32	MDM4 (ENSPPRG00000025076) #33	LRRN2 (ENSPPRG00000020672) #34	NFASC (ENSPPRG00000020215) #35
Cat	MODERN SPECIES	248	CYB5R1 (ENSFCAG00000042605)	ENSFCAG00000043564 #7	TMEM183A (ENSFCAG00000013106) #9	PPFIA4 (ENSFCAG00000013107) #10	MYOG (ENSFCAG00000034593) #11	ADORA1 (ENSFCAG00000013109) #12	CHI3L1 (ENSFCAG00000038254) #14	CHIT1 (ENSFCAG00000013111) #15	ENSFCAG00000036418	BTG2 (ENSFCAG00000043254) #16	FMOD (ENSFCAG00000031151) #17	PRELP (ENSFCAG00000025207) #18	OPTC (ENSFCAG00000013116) #19	ATP2B4 (ENSFCAG00000000870) #20	LAX1 (ENSFCAG00000045244) #21	ZBED6 (ENSFCAG00000052187) #22	ENSFCAG00000000872 #23	ENSFCAG00000042558 ##24	ENSFCAG00000013548	ETNK2 (ENSFCAG00000031352) #27	SOX13 (ENSFCAG00000002900) #26	REN (ENSFCAG00000002902) #28	KISS1 (ENSFCAG00000014845)	GOLT1A (ENSFCAG00000014847) #29	PLEKHA6 (ENSFCAG00000014849) #30	PPP1R15B (ENSFCAG00000004936) #31	PIK3C2B (ENSFCAG00000014850) #32	MDM4 (ENSFCAG00000014851) #33	LRRN2 (ENSFCAG00000014852) #34	ENSFCAG00000048866	NFASC (ENSFCAG00000027251) #35
Laurasiatheria_c	ANCESTRAL SPECIES											ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00390000012818.p ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147464	ENSGT00940000157024 #35
Chiroptera	ANCESTRAL SPECIES	22										ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00910000147821	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Microchiroptera	ANCESTRAL SPECIES	22	ENSGT00390000010993	ENSGT00940000155451	ENSGT00390000014633	ENSGT00390000012496.b	ENSGT01030000234540.B.a.a.a.b.a.a	ENSGT01030000234540.B.a.a.a.b.b.b	ENSGT01030000234540.D	ENSGT01030000234540.A.a.b	ENSGT01030000234540.B.a.a.a.b.b.a	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00910000147821	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Greater horseshoe bat	MODERN SPECIES	14	NCSTN (ENSRFEG00010017685)	VANGL2 (ENSRFEG00010017655)	ENSRFEG00010017644	ENSRFEG00010017614	CD84 (ENSRFEG00010017339)	SLAMF1 (ENSRFEG00010017290)	CD48 (ENSRFEG00010017142)	SLAMF7 (ENSRFEG00010016888)	BTG2 (ENSRFEG00010016837) #16	FMOD (ENSRFEG00010016764) #17	PRELP (ENSRFEG00010016676) #18	ENSRFEG00010016580 #19	ATP2B4 (ENSRFEG00010016468) #20	LAX1 (ENSRFEG00010016370) #21	ENSRFEG00010016311	ZBED6 (ENSRFEG00010016289) #22	ENSRFEG00010016198 #23	SNRPE (ENSRFEG00010016130) ##24	SOX13 (ENSRFEG00010015909) #26	ETNK2 (ENSRFEG00010015830) #27	REN (ENSRFEG00010015552) #28	ENSRFEG00010015475	GOLT1A (ENSRFEG00010015419) #29	PLEKHA6 (ENSRFEG00010015016) #30	ENSRFEG00010014907 #31	PIK3C2B (ENSRFEG00010014791) #32	MDM4 (ENSRFEG00010014166) #33	ENSRFEG00010014121	NFASC (ENSRFEG00010013790) #35	CNTN2 (ENSRFEG00010013668) #36	TMEM81 (ENSRFEG00010013624) #37
Microbat	MODERN SPECIES	1127	PEA15 (ENSMLUG00000001275)	DCAF8 (ENSMLUG00000001281)	COPA (ENSMLUG00000001304)	NCSTN (ENSMLUG00000001333)	VANGL2 (ENSMLUG00000002804)	ENSMLUG00000002817	CD84 (ENSMLUG00000002828)	SLAMF1 (ENSMLUG00000014214)	ENSMLUG00000014217	SLAMF7 (ENSMLUG00000005966)	BTG2 (ENSMLUG00000005972) #16	ENSMLUG00000009963 #17	PRELP (ENSMLUG00000003577) #18	ENSMLUG00000009948 #20	LAX1 (ENSMLUG00000009999) #21	ZBED6 (ENSMLUG00000024783) #22	ENSMLUG00000013236 #23	SNRPE (ENSMLUG00000013244) #24
Equus	ANCESTRAL SPECIES	33									ENSGT01050000244815.A.c.a.a.b.a.a.b	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00390000012818.p ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000161204 #34	ENSGT00910000147464	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Donkey	MODERN SPECIES	17									ENSEASG00005033487	ENSEASG00005035110 #16	FMOD (ENSEASG00005011469) #17	PRELP (ENSEASG00005011468) #18	OPTC (ENSEASG00005011467) #19	ATP2B4 (ENSEASG00005011465) #20	LAX1 (ENSEASG00005034854) #21	ZBED6 (ENSEASG00005034476) #22	ENSEASG00005030923 ##24	SOX13 (ENSEASG00005011460) #26	ETNK2 (ENSEASG00005011459) #27	REN (ENSEASG00005011458) #28	KISS1 (ENSEASG00005030775)	GOLT1A (ENSEASG00005033555) #29	PLEKHA6 (ENSEASG00005011449) #30	PIK3C2B (ENSEASG00005011436) #32	MDM4 (ENSEASG00005011431) #33	ENSEASG00005011429	LRRN2 (ENSEASG00005011430) #34	NFASC (ENSEASG00005007892) #35	CNTN2 (ENSEASG00005006417) #36	TMEM81 (ENSEASG00005035722) #37	RBBP5 (ENSEASG00005006372)
Horse	MODERN SPECIES	26									ENSECAG00000048160	BTG2 (ENSECAG00000017203) #16	FMOD (ENSECAG00000017864) #17	PRELP (ENSECAG00000018126) #18	OPTC (ENSECAG00000018151) #19	ATP2B4 (ENSECAG00000002919) #20	LAX1 (ENSECAG00000021798) #21	ZBED6 (ENSECAG00000000042) #22	ENSECAG00000030680 ##24	SOX13 (ENSECAG00000012249) #26	ETNK2 (ENSECAG00000016809) #27	REN (ENSECAG00000019104) #28	KISS1 (ENSECAG00000007327)	GOLT1A (ENSECAG00000007509) #29	PLEKHA6 (ENSECAG00000009660) #30	ENSECAG00000045931 #31	PIK3C2B (ENSECAG00000015106) #32	MDM4 (ENSECAG00000004843) #33	LRRN2 (ENSECAG00000005887) #34	ENSECAG00000033992	NFASC (ENSECAG00000011985) #35	CNTN2 (ENSECAG00000017600) #36	TMEM81 (ENSECAG00000005951) #37
Atlantogenata	ANCESTRAL SPECIES	18	ENSGT00940000163962 #8	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37	ENSGT00530000064100
Afrotheria	ANCESTRAL SPECIES	34	ENSGT00940000160784	ENSGT00940000163962 #8	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898.e #28	ENSGT00940000157898.f #28	ENSGT00390000008827	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37
Afrotheria_a	ANCESTRAL SPECIES	34	ENSGT00940000160784	ENSGT00940000163962 #8	ENSGT00940000163241 #7	ENSGT00390000009310 #9	ENSGT01050000244900.a.a.a.a.a #10	ENSGT00950000182959.a.b.b.b #11	ENSGT01030000234555.a.a.b.a.a #12	ENSGT00940000158040 #13	ENSGT00940000161815 #14	ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898.e #28	ENSGT00390000014507.b #29	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33	ENSGT00940000157024 #35	ENSGT00940000159193 #36	ENSGT00390000006349 #37	ENSGT00530000064100	ENSGT00840000129948
Elephant	MODERN SPECIES	71	ENSLAFG00000026325 #8	ENSLAFG00000030427 #7	TMEM183A (ENSLAFG00000018443) #9	PPFIA4 (ENSLAFG00000018446) #10	MYOG (ENSLAFG00000013113) #11	ENSLAFG00000023356	ADORA1 (ENSLAFG00000001262) #12	MYBPH (ENSLAFG00000001264) #13	CHI3L1 (ENSLAFG00000003983) #14	CHIT1 (ENSLAFG00000017125) #15	BTG2 (ENSLAFG00000031964) #16	FMOD (ENSLAFG00000003588) #17	PRELP (ENSLAFG00000027913) #18	ATP2B4 (ENSLAFG00000012442) #20	LAX1 (ENSLAFG00000010336) #21	ZBED6 (ENSLAFG00000029775) #22	ENSLAFG00000031207 #23	ENSLAFG00000010344 #23	SNRPE (ENSLAFG00000009349) ##24	SOX13 (ENSLAFG00000015918) #26	ETNK2 (ENSLAFG00000015937) #27	ENSLAFG00000015943 #28	GOLT1A (ENSLAFG00000010377) #29	PLEKHA6 (ENSLAFG00000010379) #30	PPP1R15B (ENSLAFG00000017031) #31	PIK3C2B (ENSLAFG00000017033) #32	MDM4 (ENSLAFG00000002169) #33	NFASC (ENSLAFG00000017510) #35	CNTN2 (ENSLAFG00000023023) #36	TMEM81 (ENSLAFG00000015023) #37	RBBP5 (ENSLAFG00000015962)
Xenarthra	ANCESTRAL SPECIES	183									ENSGT00940000161149 #15	ENSGT00950000182952.B #16	ENSGT00940000157007 #17	ENSGT00940000160163 #18	ENSGT00940000154248.a #19	ENSGT00940000154527.a.a.a #20	ENSGT00390000014063 #21	ENSGT00940000163411 #22	ENSGT00920000149095.a #23	ENSGT00390000012818.o.a.a.a.b ##24	ENSGT00940000158759 #26	ENSGT00950000182939.b.a.a #27	ENSGT00940000157898 #28	ENSGT00390000008827	ENSGT00940000159692 #30	ENSGT00940000154404.b #31	ENSGT00940000158263 #32	ENSGT00530000063539.a #33
Armadillo	MODERN SPECIES	1615									CHIT1 (ENSDNOG00000017334) #15	BTG2 (ENSDNOG00000030584) #16	FMOD (ENSDNOG00000039418) #17	PRELP (ENSDNOG00000045227) #18	ENSDNOG00000048232 #19	ATP2B4 (ENSDNOG00000025819) #20	LAX1 (ENSDNOG00000009857) #21	ZBED6 (ENSDNOG00000049271) #22	ENSDNOG00000004478 #23	SNRPE (ENSDNOG00000004490) ##24	SOX13 (ENSDNOG00000031131) #26	ETNK2 (ENSDNOG00000038942) #27	REN (ENSDNOG00000033799) #28	KISS1 (ENSDNOG00000015193)	PLEKHA6 (ENSDNOG00000011406) #30	PPP1R15B (ENSDNOG00000015817) #31	PIK3C2B (ENSDNOG00000015819) #32	MDM4 (ENSDNOG00000000842) #33	ENSDNOG00000036054	LRRN2 (ENSDNOG00000008968) #34