Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00600000085213	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00600000085213	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Glires	ANCESTRAL SPECIES	5	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00600000085213	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Rodentia	ANCESTRAL SPECIES	6	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00600000085213	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Rodentia_B	ANCESTRAL SPECIES	8	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00940000159767
Myomorpha	ANCESTRAL SPECIES	11	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00940000159767
Muroidea	ANCESTRAL SPECIES	42	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00940000159767
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00860000135742	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00390000016534.A #34	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.a	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37
Murinae	ANCESTRAL SPECIES	9	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00860000135742	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00390000016534.A #34	ENSGT00980000198488.m.a.b.a.b.a.b.b.b.a	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37
Rat	MODERN SPECIES	19	Lrrc73 (ENSRNOG00000039856) #7	Yipf3 (ENSRNOG00000018998) #8	Polr1c (ENSRNOG00000019079) #9	Xpo5 (ENSRNOG00000019085) #10	Polh (ENSRNOG00000019195) #11	Gtpbp2 (ENSRNOG00000019332) #12	Rps2-ps6 (ENSRNOG00000022934) #13	Mad2l1bp (ENSRNOG00000019463) #14	Rsph9 (ENSRNOG00000019474) #15	Mrps18a (ENSRNOG00000019511) #16	Vegfa (ENSRNOG00000019598) #17	Aars2 (ENSRNOG00000025808) #18	Mrpl14 (ENSRNOG00000019734) #19	Tmem63b (ENSRNOG00000019743) #20	Capn11 (ENSRNOG00000026025) #21	Mymx (ENSRNOG00000042497) #22	Slc29a1 (ENSRNOG00000019752) #23	Hsp90ab1 (ENSRNOG00000019834) #24	Nfkbie (ENSRNOG00000019907) #25	Slc35b2 (ENSRNOG00000019900) #26	Tmem151b (ENSRNOG00000019961) #27	Tcte1 (ENSRNOG00000065569) #28	Spats1 (ENSRNOG00000019963) #29	LOC103690502 (ENSRNOG00000064080) #30	Cdc5l (ENSRNOG00000019975) #31	LOC102551267 (ENSRNOG00000049311) #32	Supt3h (ENSRNOG00000020153) #33	Znrd1as (ENSRNOG00000020166) #34	Runx2 (ENSRNOG00000020193) #35	Clic5 (ENSRNOG00000047218) #36	Enpp4 (ENSRNOG00000010174) #37
Mus	ANCESTRAL SPECIES	16	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00860000135742	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00940000168197 #30	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00860000135742	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922.e.a #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00940000159767
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00860000135742	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922.e.a #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00940000159767
Mus_C	ANCESTRAL SPECIES	9	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00860000135742	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922.f #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00940000159767
spretus	MODERN SPECIES	8	Tjap1 (MGP_SPRETEiJ_G0022577)	Lrrc73 (MGP_SPRETEiJ_G0022576) #7	Yipf3 (MGP_SPRETEiJ_G0022575) #8	Polr1c (MGP_SPRETEiJ_G0022574) #9	Xpo5 (MGP_SPRETEiJ_G0022573) #10	Polh (MGP_SPRETEiJ_G0022572) #11	Gtpbp2 (MGP_SPRETEiJ_G0022571) #12	Mad2l1bp (MGP_SPRETEiJ_G0022570) #14	Rsph9 (MGP_SPRETEiJ_G0022569) #15	Mrps18a (MGP_SPRETEiJ_G0022568) #16	Vegfa (MGP_SPRETEiJ_G0022567) #17	1600014C23Rik (MGP_SPRETEiJ_G0022566)	Mrpl14 (MGP_SPRETEiJ_G0022565) #19	Tmem63b (MGP_SPRETEiJ_G0022564) #20	Capn11 (MGP_SPRETEiJ_G0022563) #21	Mymx (MGP_SPRETEiJ_G0022562) #22	Slc29a1 (MGP_SPRETEiJ_G0022561) #23	Hsp90ab1 (MGP_SPRETEiJ_G0022560) #24	Slc35b2 (MGP_SPRETEiJ_G0022559) #26	Nfkbie (MGP_SPRETEiJ_G0022558) #25	Tmem151b (MGP_SPRETEiJ_G0022557) #27	Tcte1 (MGP_SPRETEiJ_G0022556) #28	Aars2 (MGP_SPRETEiJ_G0022555) #18	MGP_SPRETEiJ_G0022554 #29	MGP_SPRETEiJ_G0022553 #31	Supt3 (MGP_SPRETEiJ_G0022552) #33	Runx2 (MGP_SPRETEiJ_G0022551) #35	MGP_SPRETEiJ_G0022550 #36	Enpp4 (MGP_SPRETEiJ_G0022549) #37	Enpp5 (MGP_SPRETEiJ_G0022548)	Rcan2 (MGP_SPRETEiJ_G0022547)
Steppe mouse	MODERN SPECIES	3324														Tmem63b (ENSMSIG00000023301) #20	Capn11 (ENSMSIG00000023352) #21	Mymx (ENSMSIG00000023403) #22	Slc29a1 (ENSMSIG00000023420) #23	ENSMSIG00000023496 ##24	Slc35b2 (ENSMSIG00000023500) #26	Nfkbie (ENSMSIG00000023528) #25	Tmem151b (ENSMSIG00000023557) #27	Tcte1 (ENSMSIG00000023567) #28	Aars2 (ENSMSIG00000023583) #18	Spats1 (ENSMSIG00000023603) #29	ENSMSIG00000023672	ENSMSIG00000023679 #30	Cdc5l (ENSMSIG00000023681) #31	ENSMSIG00000023729	Supt3 (ENSMSIG00000023732) #33	ENSMSIG00000023769 #35	ENSMSIG00000023907 #36
Mouse	MODERN SPECIES	8	Tjap1 (ENSMUSG00000012296)	Lrrc73 (ENSMUSG00000071073) #7	Yipf3 (ENSMUSG00000071074) #8	Polr1c (ENSMUSG00000067148) #9	Xpo5 (ENSMUSG00000067150) #10	Polh (ENSMUSG00000023953) #11	Gtpbp2 (ENSMUSG00000023952) #12	Mad2l1bp (ENSMUSG00000034509) #14	Rsph9 (ENSMUSG00000023966) #15	Mrps18a (ENSMUSG00000023967) #16	Vegfa (ENSMUSG00000023951) #17	1600014C23Rik (ENSMUSG00000094690)	Mrpl14 (ENSMUSG00000023939) #19	Tmem63b (ENSMUSG00000036026) #20	Capn11 (ENSMUSG00000058626) #21	Mymx (ENSMUSG00000079471) #22	Slc29a1 (ENSMUSG00000023942) #23	Hsp90ab1 (ENSMUSG00000023944) #24	Slc35b2 (ENSMUSG00000037089) #26	Nfkbie (ENSMUSG00000023947) #25	Tmem151b (ENSMUSG00000096847) #27	Tcte1 (ENSMUSG00000023949) #28	Aars2 (ENSMUSG00000023938) #18	Spats1 (ENSMUSG00000023935) #29	Cdc5l (ENSMUSG00000023932) #31	Supt3 (ENSMUSG00000038954) #33	Runx2 (ENSMUSG00000039153) #35	Clic5 (ENSMUSG00000023959) #36	Enpp4 (ENSMUSG00000023961) #37	Enpp5 (ENSMUSG00000023960)	Rcan2 (ENSMUSG00000039601)
Ryukyu mouse	MODERN SPECIES	8	Tjap1 (MGP_CAROLIEiJ_G0021665)	Lrrc73 (MGP_CAROLIEiJ_G0021664) #7	Yipf3 (MGP_CAROLIEiJ_G0021663) #8	Polr1c (MGP_CAROLIEiJ_G0021662) #9	Xpo5 (MGP_CAROLIEiJ_G0021661) #10	Polh (MGP_CAROLIEiJ_G0021660) #11	Gtpbp2 (MGP_CAROLIEiJ_G0021659) #12	Mad2l1bp (MGP_CAROLIEiJ_G0021658) #14	Rsph9 (MGP_CAROLIEiJ_G0021657) #15	Mrps18a (MGP_CAROLIEiJ_G0021656) #16	MGP_CAROLIEiJ_G0021655 #17	MGP_CAROLIEiJ_G0021654	Mrpl14 (MGP_CAROLIEiJ_G0021653) #19	Tmem63b (MGP_CAROLIEiJ_G0021652) #20	Capn11 (MGP_CAROLIEiJ_G0021651) #21	MGP_CAROLIEiJ_G0021650 #22	Slc29a1 (MGP_CAROLIEiJ_G0021649) #23	Hsp90ab1 (MGP_CAROLIEiJ_G0021648) #24	Slc35b2 (MGP_CAROLIEiJ_G0021647) #26	Nfkbie (MGP_CAROLIEiJ_G0021646) #25	Tmem151b (MGP_CAROLIEiJ_G0021645) #27	Tcte1 (MGP_CAROLIEiJ_G0021644) #28	Aars2 (MGP_CAROLIEiJ_G0021643) #18	MGP_CAROLIEiJ_G0021642 #29	Cdc5l (MGP_CAROLIEiJ_G0021641) #31	Supt3 (MGP_CAROLIEiJ_G0021640) #33	Runx2 (MGP_CAROLIEiJ_G0021639) #35	MGP_CAROLIEiJ_G0021638 #36	Enpp4 (MGP_CAROLIEiJ_G0021637) #37	Enpp5 (MGP_CAROLIEiJ_G0021636)	Rcan2 (MGP_CAROLIEiJ_G0021635)
Shrew mouse	MODERN SPECIES	9	MGP_PahariEiJ_G0020657	Lrrc73 (MGP_PahariEiJ_G0020656) #7	Yipf3 (MGP_PahariEiJ_G0020655) #8	Polr1c (MGP_PahariEiJ_G0020654) #9	Xpo5 (MGP_PahariEiJ_G0020653) #10	Polh (MGP_PahariEiJ_G0020652) #11	Gtpbp2 (MGP_PahariEiJ_G0020651) #12	Mad2l1bp (MGP_PahariEiJ_G0020650) #14	Rsph9 (MGP_PahariEiJ_G0020649) #15	Mrps18a (MGP_PahariEiJ_G0020648) #16	Vegfa (MGP_PahariEiJ_G0020647) #17	1600014C23Rik (MGP_PahariEiJ_G0020646)	Mrpl14 (MGP_PahariEiJ_G0020645) #19	Tmem63b (MGP_PahariEiJ_G0020644) #20	Capn11 (MGP_PahariEiJ_G0020643) #21	MGP_PahariEiJ_G0020642 #22	Slc29a1 (MGP_PahariEiJ_G0020641) #23	MGP_PahariEiJ_G0020640 ##24	Slc35b2 (MGP_PahariEiJ_G0020639) #26	Nfkbie (MGP_PahariEiJ_G0020638) #25	Tmem151b (MGP_PahariEiJ_G0020637) #27	Tcte1 (MGP_PahariEiJ_G0020636) #28	Aars2 (MGP_PahariEiJ_G0020635) #18	MGP_PahariEiJ_G0020634	MGP_PahariEiJ_G0020633 #31	Supt3 (MGP_PahariEiJ_G0020632) #33	Runx2 (MGP_PahariEiJ_G0020631) #35	MGP_PahariEiJ_G0020630 #36	Enpp4 (MGP_PahariEiJ_G0020629) #37	Enpp5 (MGP_PahariEiJ_G0020628)	Rcan2 (MGP_PahariEiJ_G0020627)
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00860000135742	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00940000159767
Cricetidae_B	ANCESTRAL SPECIES	32	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00860000135742	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00390000016534.A #34	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Northern American deer mouse	MODERN SPECIES	13	Dlk2 (ENSPEMG00000014891)	Tjap1 (ENSPEMG00000000063)	Lrrc73 (ENSPEMG00000010422) #7	Yipf3 (ENSPEMG00000013680) #8	Polr1c (ENSPEMG00000006970) #9	Xpo5 (ENSPEMG00000020387) #10	Polh (ENSPEMG00000014884) #11	Gtpbp2 (ENSPEMG00000021976) #12	Mad2l1bp (ENSPEMG00000003113) #14	Rsph9 (ENSPEMG00000011206) #15	Mrps18a (ENSPEMG00000000405) #16	Vegfa (ENSPEMG00000023496) #17	ENSPEMG00000007451 #19	Tmem63b (ENSPEMG00000020790) #20	Capn11 (ENSPEMG00000016267) #21	Mymx (ENSPEMG00000031136) #22	Slc29a1 (ENSPEMG00000012099) #23	ENSPEMG00000020801 #24	Slc35b2 (ENSPEMG00000010433) #26	Nfkbie (ENSPEMG00000009911) #25	Tmem151b (ENSPEMG00000020728) #27	Tcte1 (ENSPEMG00000016228) #28	Aars2 (ENSPEMG00000022933) #18	Spats1 (ENSPEMG00000015089) #29	ENSPEMG00000007860 #31	ENSPEMG00000019806 #33	ENSPEMG00000026605 #34	Runx2 (ENSPEMG00000024867) #35	ENSPEMG00000025325 #36	Enpp4 (ENSPEMG00000025230) #37	Enpp5 (ENSPEMG00000009544)
Prairie vole	MODERN SPECIES	352	Smap1 (ENSMOCG00000012663)	B3gat2 (ENSMOCG00000008496)	ENSMOCG00000008718	Rims1 (ENSMOCG00000016536)	Kcnq5 (ENSMOCG00000020453)	ENSMOCG00000020341	ENSMOCG00000005557	ENSMOCG00000004441	Rsph9 (ENSMOCG00000002026) #15	ENSMOCG00000021207 #16	Vegfa (ENSMOCG00000003577) #17	1600014C23Rik (ENSMOCG00000015577)	Mrpl14 (ENSMOCG00000013481) #19	Tmem63b (ENSMOCG00000014333) #20	Capn11 (ENSMOCG00000012508) #21	Mymx (ENSMOCG00000015430) #22	Slc29a1 (ENSMOCG00000020636) #23	Hsp90ab1 (ENSMOCG00000018428) #24	Slc35b2 (ENSMOCG00000016485) #26	Nfkbie (ENSMOCG00000005380) #25	Tmem151b (ENSMOCG00000022994) #27	Tcte1 (ENSMOCG00000015670) #28	Aars2 (ENSMOCG00000016383) #18	Spats1 (ENSMOCG00000012845) #29	ENSMOCG00000022910 #31	Supt3 (ENSMOCG00000001470) #33	Runx2 (ENSMOCG00000008760) #35	ENSMOCG00000011235 #36	Enpp4 (ENSMOCG00000020772) #37	Enpp5 (ENSMOCG00000022512)	Rcan2 (ENSMOCG00000020179)
Cricetinae	ANCESTRAL SPECIES	28	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00940000159767
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	165												Mrps18a (ENSCGRG00001017882) #16	Vegfa (ENSCGRG00001021125) #17	Mrpl14 (ENSCGRG00001013490) #19	Tmem63b (ENSCGRG00001023855) #20	ENSCGRG00001021384 #22	Slc29a1 (ENSCGRG00001023604) #23	Hsp90ab1 (ENSCGRG00001021336) #24	ENSCGRG00001017772 #26	Nfkbie (ENSCGRG00001013839) #25	Tmem151b (ENSCGRG00001003709) #27	Tcte1 (ENSCGRG00001023961) #28	Aars2 (ENSCGRG00001006954) #18	ENSCGRG00001000421	Spats1 (ENSCGRG00001021482) #29	ENSCGRG00001019419 #31	Supt3 (ENSCGRG00001012497) #33	Runx2 (ENSCGRG00001008399) #35	ENSCGRG00001006293 #36	Enpp4 (ENSCGRG00001000243) #37	Enpp5 (ENSCGRG00001021901)
Chinese hamster chok1gshd	MODERN SPECIES	401	Rabep2 (ENSCGRG00001019856)	Cd19 (ENSCGRG00001001638)	Nfatc2ip (ENSCGRG00001023795)	Spns1 (ENSCGRG00001020734)	Lat (ENSCGRG00001018116)	Sbk1 (ENSCGRG00001022461)	Xpo6 (ENSCGRG00001013173)	Gsg1l (ENSCGRG00001019110)	Katnip (ENSCGRG00001018820)	Gtf3c1 (ENSCGRG00001003866)	Il21r (ENSCGRG00001014015)	Il4ra (ENSCGRG00001009994)	Nsmce1 (ENSCGRG00001018753)	Kdm8 (ENSCGRG00001017571)	Hs3st4 (ENSCGRG00001016433)	ENSCGRG00001009250 #22	Zkscan2 (ENSCGRG00001022665)	Aqp8 (ENSCGRG00001024067)	Lcmt1 (ENSCGRG00001017343)	Arhgap17 (ENSCGRG00001016451)	Slc5a11 (ENSCGRG00001023714)	Tnrc6a (ENSCGRG00001015021)	Rbbp6 (ENSCGRG00001017193)	Cacng3 (ENSCGRG00001019756)	Prkcb (ENSCGRG00001010289)	Chp2 (ENSCGRG00001017404)	Ern2 (ENSCGRG00001019098)	Plk1 (ENSCGRG00001021855)	Dctn5 (ENSCGRG00001019871)	Palb2 (ENSCGRG00001010961)	Ndufab1 (ENSCGRG00001005503)
Lesser Egyptian jerboa	MODERN SPECIES	41	Dlk2 (ENSJJAG00000013128)	ENSJJAG00000000504	Lrrc73 (ENSJJAG00000022553) #7	Yipf3 (ENSJJAG00000021863) #8	Polr1c (ENSJJAG00000023110) #9	Xpo5 (ENSJJAG00000009521) #10	Polh (ENSJJAG00000013744) #11	Gtpbp2 (ENSJJAG00000023430) #12	Mad2l1bp (ENSJJAG00000022925) #14	Rsph9 (ENSJJAG00000019847) #15	Mrps18a (ENSJJAG00000006567) #16	Vegfa (ENSJJAG00000007689) #17	Mrpl14 (ENSJJAG00000021477) #19	Tmem63b (ENSJJAG00000021961) #20	Capn11 (ENSJJAG00000023762) #21	Mymx (ENSJJAG00000013992) #22	ENSJJAG00000021418 #23	Hsp90ab1 (ENSJJAG00000018744) #24	Slc35b2 (ENSJJAG00000020418) #26	Nfkbie (ENSJJAG00000021238) #25	Tmem151b (ENSJJAG00000019960) #27	Tcte1 (ENSJJAG00000019641) #28	Aars2 (ENSJJAG00000015691) #18	Paqr8 (ENSJJAG00000002669)	Efhc1 (ENSJJAG00000019979)	Tram2 (ENSJJAG00000019249)	ENSJJAG00000022957	Gsta3 (ENSJJAG00000022357)	ENSJJAG00000021834 #29	Crisp2 (ENSJJAG00000018523)	Pgk2 (ENSJJAG00000003644)
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00600000085213	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00940000159767
Naked mole-rat female	MODERN SPECIES	4	DLK2 (ENSHGLG00000017186)	TJAP1 (ENSHGLG00000050716)	LRRC73 (ENSHGLG00000019162) #7	YIPF3 (ENSHGLG00000019245) #8	POLR1C (ENSHGLG00000039530) #9	XPO5 (ENSHGLG00000019191) #10	POLH (ENSHGLG00000019433) #11	GTPBP2 (ENSHGLG00000014886) #12	MAD2L1BP (ENSHGLG00000014709) #14	RSPH9 (ENSHGLG00000050155) #15	MRPS18A (ENSHGLG00000014356) #16	VEGFA (ENSHGLG00000045954) #17	MRPL14 (ENSHGLG00000048124) #19	TMEM63B (ENSHGLG00000014725) #20	ENSHGLG00000034302 #21	MYMX (ENSHGLG00000014348) #22	SLC29A1 (ENSHGLG00000013873) #23	HSP90AB1 (ENSHGLG00000013490) #24	SLC35B2 (ENSHGLG00000013337) #26	NFKBIE (ENSHGLG00000012781) #25	TMEM151B (ENSHGLG00000050065) #27	TCTE1 (ENSHGLG00000012480) #28	AARS2 (ENSHGLG00000012340) #18	SPATS1 (ENSHGLG00000012136) #29	CDC5L (ENSHGLG00000011993) #31	ENSHGLG00000011683 #33	ENSHGLG00000042819	ENSHGLG00000040299	ENSHGLG00000032005	ENSHGLG00000011154 #35	ENSHGLG00000037449 #36
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00940000159767
Marmotini	ANCESTRAL SPECIES	18	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812.h #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00960000190714	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00940000159767
Marmotini_b	ANCESTRAL SPECIES	8	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812.h #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00960000190714	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00940000159767
Squirrel	MODERN SPECIES	76	DLK2 (ENSSTOG00000010600)	TJAP1 (ENSSTOG00000010606)	LRRC73 (ENSSTOG00000010618) #7	YIPF3 (ENSSTOG00000010624) #8	POLR1C (ENSSTOG00000010631) #9	XPO5 (ENSSTOG00000020172) #10	POLH (ENSSTOG00000010681) #11	GTPBP2 (ENSSTOG00000021274) #12	MAD2L1BP (ENSSTOG00000028891) #14	RSPH9 (ENSSTOG00000028063) #15	MRPS18A (ENSSTOG00000004490) #16	VEGFA (ENSSTOG00000008877) #17	MRPL14 (ENSSTOG00000004549) #19	TMEM63B (ENSSTOG00000007096) #20	CAPN11 (ENSSTOG00000003304) #21	MYMX (ENSSTOG00000030271) #22	SLC29A1 (ENSSTOG00000003337) #23	HSP90AB1 (ENSSTOG00000024614) #24	SLC35B2 (ENSSTOG00000026446) #26	NFKBIE (ENSSTOG00000013475) #25	TMEM151B (ENSSTOG00000013488) #27	TCTE1 (ENSSTOG00000033904) #28	AARS2 (ENSSTOG00000013499) #18	SPATS1 (ENSSTOG00000025344) #29	CDC5L (ENSSTOG00000016173) #31	SUPT3H (ENSSTOG00000015411) #33	RUNX2 (ENSSTOG00000010163) #35	CLIC5 (ENSSTOG00000028761) #36	ENPP4 (ENSSTOG00000011891) #37	ENPP5 (ENSSTOG00000011895)	RCAN2 (ENSSTOG00000004809)
Arctic ground squirrel	MODERN SPECIES	138									RSPH9 (ENSUPAG00010003487) #15	MRPS18A (ENSUPAG00010003493) #16	VEGFA (ENSUPAG00010003509) #17	ENSUPAG00010003659	MRPL14 (ENSUPAG00010003668) #19	TMEM63B (ENSUPAG00010003679) #20	CAPN11 (ENSUPAG00010003744) #21	MYMX (ENSUPAG00010003794) #22	SLC29A1 (ENSUPAG00010003804) #23	ENSUPAG00010004079 ##24	ENSUPAG00010004086 ##24	SLC35B2 (ENSUPAG00010004089) #26	NFKBIE (ENSUPAG00010004104) #25	TMEM151B (ENSUPAG00010004120) #27	ENSUPAG00010004124 #28	AARS2 (ENSUPAG00010004131) #18	SPATS1 (ENSUPAG00010004153) #29	CDC5L (ENSUPAG00010004167) #31	SUPT3H (ENSUPAG00010004183) #33	RUNX2 (ENSUPAG00010004197) #35	CLIC5 (ENSUPAG00010004493) #36	ENPP4 (ENSUPAG00010004511) #37	ENPP5 (ENSUPAG00010004521)
Alpin marmot	MODERN SPECIES	20	TJAP1 (ENSMMMG00000024555)	LRRC73 (ENSMMMG00000024556) #7	YIPF3 (ENSMMMG00000024557) #8	POLR1C (ENSMMMG00000024558) #9	XPO5 (ENSMMMG00000024559) #10	POLH (ENSMMMG00000024560) #11	GTPBP2 (ENSMMMG00000024561) #12	ENSMMMG00000024562 #14	RSPH9 (ENSMMMG00000024563) #15	MRPS18A (ENSMMMG00000024564) #16	VEGFA (ENSMMMG00000024565) #17	ENSMMMG00000024566	MRPL14 (ENSMMMG00000024567) #19	TMEM63B (ENSMMMG00000024568) #20	CAPN11 (ENSMMMG00000024569) #21	MYMX (ENSMMMG00000024570) #22	SLC29A1 (ENSMMMG00000024571) #23	HSP90AB1 (ENSMMMG00000024577) #24	SLC35B2 (ENSMMMG00000024578) #26	NFKBIE (ENSMMMG00000024579) #25	TMEM151B (ENSMMMG00000024580) #27	TCTE1 (ENSMMMG00000024581) #28	AARS2 (ENSMMMG00000024582) #18	CDC5L (ENSMMMG00000024584) #31	SUPT3H (ENSMMMG00000024585) #33	ENSMMMG00000024586	CLIC5 (ENSMMMG00000024588) #36	ENPP4 (ENSMMMG00000024589) #37	ENPP5 (ENSMMMG00000024590)	RCAN2 (ENSMMMG00000024592)	CYP39A1 (ENSMMMG00000024593)
Eurasian red squirrel	MODERN SPECIES	16	TJAP1 (ENSSVLG00005005960)	LRRC73 (ENSSVLG00005005929) #7	YIPF3 (ENSSVLG00005005873) #8	POLR1C (ENSSVLG00005005820) #9	XPO5 (ENSSVLG00005005755) #10	ENSSVLG00005005709	POLH (ENSSVLG00005005606) #11	ENSSVLG00005005500 #12	MAD2L1BP (ENSSVLG00005005455) #14	RSPH9 (ENSSVLG00005005429) #15	MRPS18A (ENSSVLG00005005389) #16	VEGFA (ENSSVLG00005005248) #17	MRPL14 (ENSSVLG00005005175) #19	TMEM63B (ENSSVLG00005005124) #20	CAPN11 (ENSSVLG00005005041) #21	MYMX (ENSSVLG00005005017) #22	SLC29A1 (ENSSVLG00005004999) #23	HSP90AB1 (ENSSVLG00005004982) #24	SLC35B2 (ENSSVLG00005004954) #26	NFKBIE (ENSSVLG00005004924) #25	TMEM151B (ENSSVLG00005004904) #27	TCTE1 (ENSSVLG00005004874) #28	AARS2 (ENSSVLG00005004851) #18	CDC5L (ENSSVLG00005004771) #31	ENSSVLG00005004758	ENSSVLG00005004703 #33	RUNX2 (ENSSVLG00005004619) #35	CLIC5 (ENSSVLG00005004461) #36	ENPP4 (ENSSVLG00005004390) #37	ENPP5 (ENSSVLG00005004369)	RCAN2 (ENSSVLG00005004330)
Lagomorpha	ANCESTRAL SPECIES	2	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.b ##24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00600000085213	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Rabbit	MODERN SPECIES	3	DLK2 (ENSOCUG00000004371)	TJAP1 (ENSOCUG00000023704)	LRRC73 (ENSOCUG00000005243) #7	YIPF3 (ENSOCUG00000005499) #8	POLR1C (ENSOCUG00000005504) #9	XPO5 (ENSOCUG00000005510) #10	POLH (ENSOCUG00000005525) #11	GTPBP2 (ENSOCUG00000005529) #12	MAD2L1BP (ENSOCUG00000005532) #14	RSPH9 (ENSOCUG00000005537) #15	MRPS18A (ENSOCUG00000005544) #16	VEGFA (ENSOCUG00000011610) #17	TMEM63B (ENSOCUG00000003464) #20	ENSOCUG00000015740 #19	CAPN11 (ENSOCUG00000017535) #21	MYMX (ENSOCUG00000034679) #22	SLC29A1 (ENSOCUG00000017891) #23	HSP90AB1 (ENSOCUG00000012842) ##24	SLC35B2 (ENSOCUG00000017893) #26	NFKBIE (ENSOCUG00000017894) #25	TMEM151B (ENSOCUG00000024837) #27	TCTE1 (ENSOCUG00000017899) #28	AARS2 (ENSOCUG00000021422) #18	ENSOCUG00000017227 #29	ENSOCUG00000038161	CDC5L (ENSOCUG00000017240) #31	ENSOCUG00000035183	SUPT3H (ENSOCUG00000014574) #33	ENSOCUG00000031467	RUNX2 (ENSOCUG00000011739) #35	CLIC5 (ENSOCUG00000022531) #36
Primates	ANCESTRAL SPECIES	5	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00910000147751
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00910000147751
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00940000161543.e	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000005085	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000001158	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00940000161543.e	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000005085	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000001158	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00940000161543.e	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000005085	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000001158	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Hominidae	ANCESTRAL SPECIES	5	ENSGT00940000161543.e	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000005085	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000001158	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000005085	ENSGT00910000148752	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000001158	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Gorilla	MODERN SPECIES	19	LRRC73 (ENSGGOG00000015189) #7	ENSGGOG00000010894 #8	POLR1C (ENSGGOG00000010903) #9	XPO5 (ENSGGOG00000007940) #10	ENSGGOG00000043699 #11	GTPBP2 (ENSGGOG00000014744) #12	MAD2L1BP (ENSGGOG00000023906) #14	ENSGGOG00000006299 #15	ENSGGOG00000006303 #16	VEGFA (ENSGGOG00000012714) #17	ENSGGOG00000043498	ENSGGOG00000043300	MRPL14 (ENSGGOG00000006098) #19	TMEM63B (ENSGGOG00000003071) #20	CAPN11 (ENSGGOG00000003079) #21	MYMX (ENSGGOG00000022349) #22	SLC29A1 (ENSGGOG00000008377) #23	HSP90AB1 (ENSGGOG00000008889) #24	SLC35B2 (ENSGGOG00000008896) #26	NFKBIE (ENSGGOG00000008901) #25	TMEM151B (ENSGGOG00000007687) #27	TCTE1 (ENSGGOG00000007690) #28	AARS (ENSGGOG00000005517) #18	SPATS1 (ENSGGOG00000005532) #29	CDC5L (ENSGGOG00000006784) #31	ENSGGOG00000022252	SUPT3H (ENSGGOG00000014631) #33	ENSGGOG00000012890 #35	ENSGGOG00000013209 #36	ENPP4 (ENSGGOG00000007462) #37	ENPP5 (ENSGGOG00000016512)
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000005085	ENSGT00910000148752	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.j ##24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000001158	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Human	MODERN SPECIES	18	DLK2 (ENSG00000171462)	TJAP1 (ENSG00000137221)	LRRC73 (ENSG00000204052) #7	POLR1C (ENSG00000171453) #9	YIPF3 (ENSG00000137207) #8	XPO5 (ENSG00000124571) #10	POLH (ENSG00000170734) #11	GTPBP2 (ENSG00000172432) #12	MAD2L1BP (ENSG00000124688) #14	RSPH9 (ENSG00000172426) #15	MRPS18A (ENSG00000096080) #16	VEGFA (ENSG00000112715) #17	MRPL14 (ENSG00000180992) #19	TMEM63B (ENSG00000137216) #20	CAPN11 (ENSG00000137225) #21	MYMX (ENSG00000262179) #22	SLC29A1 (ENSG00000112759) #23	HSP90AB1 (ENSG00000096384) #24	SLC35B2 (ENSG00000157593) #26	NFKBIE (ENSG00000146232) #25	TMEM151B (ENSG00000178233) #27	TCTE1 (ENSG00000146221) #28	AARS2 (ENSG00000124608) #18	SPATS1 (ENSG00000249481) #29	CDC5L (ENSG00000096401) #31	SUPT3H (ENSG00000196284) #33	RUNX2 (ENSG00000124813) #35	CLIC5 (ENSG00000112782) #36	ENPP4 (ENSG00000001561) #37	ENPP5 (ENSG00000112796)	RCAN2 (ENSG00000172348)
Pan	ANCESTRAL SPECIES	5	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000005085	ENSGT00910000148752	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.j ##24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000001158	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Chimpanzee	MODERN SPECIES	19	YIPF3 (ENSPTRG00000018201) #8	POLR1C (ENSPTRG00000018202) #9	XPO5 (ENSPTRG00000018204) #10	ENSPTRG00000047136 ##13	POLH (ENSPTRG00000018205) #11	GTPBP2 (ENSPTRG00000018206) #12	MAD2L1BP (ENSPTRG00000018207) #14	RSPH9 (ENSPTRG00000052351) #15	MRPS18A (ENSPTRG00000018209) #16	VEGFA (ENSPTRG00000043213) #17	LINC03040 (ENSPTRG00000044964)	ENSPTRG00000046423	MRPL14 (ENSPTRG00000018213) #19	TMEM63B (ENSPTRG00000018214) #20	CAPN11 (ENSPTRG00000018215) #21	MYMX (ENSPTRG00000043831) #22	SLC29A1 (ENSPTRG00000018216) #23	HSP90AB1 (ENSPTRG00000018217) ##24	SLC35B2 (ENSPTRG00000045028) #26	NFKBIE (ENSPTRG00000018219) #25	TMEM151B (ENSPTRG00000018220) #27	TCTE1 (ENSPTRG00000018221) #28	AARS2 (ENSPTRG00000018222) #18	SPATS1 (ENSPTRG00000018223) #29	CDC5L (ENSPTRG00000018224) #31	ENSPTRG00000049163	SUPT3H (ENSPTRG00000023379) #33	RUNX2 (ENSPTRG00000018228) #35	CLIC5 (ENSPTRG00000018230) #36	ENPP4 (ENSPTRG00000018231) #37	ENPP5 (ENSPTRG00000018232)
Bonobo	MODERN SPECIES	19	ENSPPAG00000015711 #8	POLR1C (ENSPPAG00000043678) #9	XPO5 (ENSPPAG00000039971) #10	ENSPPAG00000040669	POLH (ENSPPAG00000038133) #11	GTPBP2 (ENSPPAG00000034475) #12	MAD2L1BP (ENSPPAG00000041364) #14	ENSPPAG00000040963 #15	MRPS18A (ENSPPAG00000036291) #16	VEGFA (ENSPPAG00000027018) #17	ENSPPAG00000033753	ENSPPAG00000041620	MRPL14 (ENSPPAG00000036858) #19	TMEM63B (ENSPPAG00000027102) #20	CAPN11 (ENSPPAG00000035892) #21	MYMX (ENSPPAG00000026302) #22	SLC29A1 (ENSPPAG00000033742) #23	ENSPPAG00000033123 ##24	SLC35B2 (ENSPPAG00000027390) #26	ENSPPAG00000028804 #25	ENSPPAG00000041269 #27	TCTE1 (ENSPPAG00000034916) #28	AARS2 (ENSPPAG00000011981) #18	SPATS1 (ENSPPAG00000007633) #29	CDC5L (ENSPPAG00000031456) #31	ENSPPAG00000016263	ENSPPAG00000030879 #33	RUNX2 (ENSPPAG00000036423) #35	ENSPPAG00000025002 #36	ENPP4 (ENSPPAG00000032184) #37	ENPP5 (ENSPPAG00000032683)
Orangutan	MODERN SPECIES	19	DLK2 (ENSPPYG00000016641)	TJAP1 (ENSPPYG00000016642)	ENSPPYG00000016643 #7	YIPF3 (ENSPPYG00000016644) #8	POLR1C (ENSPPYG00000016645) #9	XPO5 (ENSPPYG00000016646) #10	POLH (ENSPPYG00000033093) #11	GTPBP2 (ENSPPYG00000017279) #12	MAD2L1BP (ENSPPYG00000017281) #14	MRPS18A (ENSPPYG00000017282) #16	VEGFA (ENSPPYG00000016647) #17	ENSPPYG00000016649	MRPL14 (ENSPPYG00000016650) #19	TMEM63B (ENSPPYG00000016651) #20	CAPN11 (ENSPPYG00000016652) #21	MYMX (ENSPPYG00000039061) #22	SLC29A1 (ENSPPYG00000016654) #23	HSP90AB1 (ENSPPYG00000016655) #24	SLC35B2 (ENSPPYG00000032493) #26	ENSPPYG00000016656 #25	TMEM151B (ENSPPYG00000016657) #27	TCTE1 (ENSPPYG00000016658) #28	AARS2 (ENSPPYG00000016659) #18	SPATS1 (ENSPPYG00000016660) #29	CDC5L (ENSPPYG00000016661) #31	ENSPPYG00000016662	SUPT3H (ENSPPYG00000016663) #33	ENSPPYG00000016664 #35	ENSPPYG00000016665 #36	ENPP4 (ENSPPYG00000016666) #37	ENPP5 (ENSPPYG00000016667)
Gibbon	MODERN SPECIES	7	DLK2 (ENSNLEG00000030265)	ENSNLEG00000029088	LRRC73 (ENSNLEG00000004080) #7	ENSNLEG00000004074 #8	POLR1C (ENSNLEG00000004035) #9	XPO5 (ENSNLEG00000003966) #10	POLH (ENSNLEG00000003958) #11	GTPBP2 (ENSNLEG00000003909) #12	MAD2L1BP (ENSNLEG00000033665) #14	ENSNLEG00000003901 #15	MRPS18A (ENSNLEG00000003865) #16	VEGFA (ENSNLEG00000003829) #17	ENSNLEG00000003824	TMEM63B (ENSNLEG00000003801) #20	ENSNLEG00000003797 #21	MYMX (ENSNLEG00000019018) #22	SLC29A1 (ENSNLEG00000003716) #23	ENSNLEG00000029372 ##24	SLC35B2 (ENSNLEG00000003703) #26	ENSNLEG00000003672 #25	TMEM151B (ENSNLEG00000003670) #27	TCTE1 (ENSNLEG00000003668) #28	AARS2 (ENSNLEG00000026583) #18	SPATS1 (ENSNLEG00000003651) #29	CDC5L (ENSNLEG00000003627) #31	ENSNLEG00000019017	SUPT3H (ENSNLEG00000032331) #33	ENSNLEG00000003611 #35	ENSNLEG00000003594 #36	ENPP4 (ENSNLEG00000003581) #37	STK39 (ENSNLEG00000003560)
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00940000161543.e	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000005085	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000001158	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00940000161543.e	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000005085	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000001158	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00940000161543.e	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000005085	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000001158	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Macaca	ANCESTRAL SPECIES	9	ENSGT00940000161543.e	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000005085	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00910000147751
Pig-tailed macaque	MODERN SPECIES	157	TJAP1 (ENSMNEG00000025245)	LRRC73 (ENSMNEG00000033430) #7	YIPF3 (ENSMNEG00000044770) #8	POLR1C (ENSMNEG00000028073) #9	XPO5 (ENSMNEG00000035404) #10	POLH (ENSMNEG00000042281) #11	GTPBP2 (ENSMNEG00000029284) #12	MAD2L1BP (ENSMNEG00000042395) #14	RSPH9 (ENSMNEG00000045520) #15	MRPS18A (ENSMNEG00000044642) #16	VEGFA (ENSMNEG00000041005) #17	ENSMNEG00000029690	MRPL14 (ENSMNEG00000034641) #19	TMEM63B (ENSMNEG00000039311) #20	CAPN11 (ENSMNEG00000029403) #21	MYMX (ENSMNEG00000010782) #22	SLC29A1 (ENSMNEG00000029998) #23	HSP90AB1 (ENSMNEG00000034241) #24	SLC35B2 (ENSMNEG00000008714) #26	TCTE1 (ENSMNEG00000029274) #28	TMEM151B (ENSMNEG00000043452) #27	AARS2 (ENSMNEG00000029416) #18	SPATS1 (ENSMNEG00000033305) #29	CDC5L (ENSMNEG00000036577) #31	SUPT3H (ENSMNEG00000029500) #33	RUNX2 (ENSMNEG00000042849) #35	CLIC5 (ENSMNEG00000040569) #36	ENPP4 (ENSMNEG00000029543) #37	ENPP5 (ENSMNEG00000029270)
Cercopithecinae_b	ANCESTRAL SPECIES	18	ENSGT00940000161543.e	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000005085	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000001158	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Olive baboon	MODERN SPECIES	16	TJAP1 (ENSPANG00000045338)	LRRC73 (ENSPANG00000005641) #7	YIPF3 (ENSPANG00000023627) #8	POLR1C (ENSPANG00000009025) #9	XPO5 (ENSPANG00000004080) #10	POLH (ENSPANG00000016473) #11	GTPBP2 (ENSPANG00000023626) #12	MAD2L1BP (ENSPANG00000020360) #14	RSPH9 (ENSPANG00000030372) #15	MRPS18A (ENSPANG00000006967) #16	VEGFA (ENSPANG00000004079) #17	ENSPANG00000005020	ENSPANG00000046969 #19	TMEM63B (ENSPANG00000023571) #20	CAPN11 (ENSPANG00000023068) #21	MYMX (ENSPANG00000034855) #22	SLC29A1 (ENSPANG00000023625) #23	HSP90AB1 (ENSPANG00000000442) #24	SLC35B2 (ENSPANG00000047147) #26	NFKBIE (ENSPANG00000022206) #25	TMEM151B (ENSPANG00000017776) #27	TCTE1 (ENSPANG00000017777) #28	AARS2 (ENSPANG00000004773) #18	SPATS1 (ENSPANG00000024568) #29	CDC5L (ENSPANG00000018654) #31	ENSPANG00000049227	SUPT3H (ENSPANG00000022344) #33	RUNX2 (ENSPANG00000006186) #35	CLIC5 (ENSPANG00000024966) #36	ENPP4 (ENSPANG00000000926) #37	ENPP5 (ENSPANG00000008268)
Cercopithecinae_d	ANCESTRAL SPECIES	13	ENSGT00940000161543.e	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000005085	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00950000182960.a.a.a.a.b.rb.u.b.a
Sooty mangabey	MODERN SPECIES	97	TJAP1 (ENSCATG00000037638)	LRRC73 (ENSCATG00000041876) #7	YIPF3 (ENSCATG00000038097) #8	POLR1C (ENSCATG00000044045) #9	XPO5 (ENSCATG00000036321) #10	POLH (ENSCATG00000041260) #11	GTPBP2 (ENSCATG00000044605) #12	MAD2L1BP (ENSCATG00000042247) #14	RSPH9 (ENSCATG00000030811) #15	MRPS18A (ENSCATG00000012963) #16	VEGFA (ENSCATG00000030128) #17	ENSCATG00000029856	MRPL14 (ENSCATG00000027037) #19	TMEM63B (ENSCATG00000041638) #20	CAPN11 (ENSCATG00000040416) #21	MYMX (ENSCATG00000020334) #22	SLC29A1 (ENSCATG00000025154) #23	HSP90AB1 (ENSCATG00000035400) #24	SLC35B2 (ENSCATG00000029059) #26	NFKBIE (ENSCATG00000027685) #25	TCTE1 (ENSCATG00000032513) #28	TMEM151B (ENSCATG00000044696) #27	AARS2 (ENSCATG00000033744) #18	SPATS1 (ENSCATG00000035034) #29	CDC5L (ENSCATG00000038925) #31	SUPT3H (ENSCATG00000030142) #33	RUNX2 (ENSCATG00000037036) #35	CLIC5 (ENSCATG00000015665) #36	ENSCATG00000031136	ENPP4 (ENSCATG00000043419) #37	ENPP5 (ENSCATG00000042109)
Drill	MODERN SPECIES	941	TJAP1 (ENSMLEG00000036943)	LRRC73 (ENSMLEG00000042718) #7	YIPF3 (ENSMLEG00000036767) #8	POLR1C (ENSMLEG00000034818) #9	XPO5 (ENSMLEG00000035689) #10	POLH (ENSMLEG00000035423) #11	GTPBP2 (ENSMLEG00000020440) #12	MAD2L1BP (ENSMLEG00000028705) #14	RSPH9 (ENSMLEG00000038825) #15	MRPS18A (ENSMLEG00000041828) #16	ENSMLEG00000038668 #17	ENSMLEG00000032234	MRPL14 (ENSMLEG00000030732) #19	TMEM63B (ENSMLEG00000036196) #20	CAPN11 (ENSMLEG00000032534) #21	MYMX (ENSMLEG00000024197) #22	SLC29A1 (ENSMLEG00000037598) #23	HSP90AB1 (ENSMLEG00000024522) #24	SLC35B2 (ENSMLEG00000021766) #26	NFKBIE (ENSMLEG00000038934) #25	ENSMLEG00000039771 #27	TCTE1 (ENSMLEG00000034744) #28	AARS2 (ENSMLEG00000035617) #18	SPATS1 (ENSMLEG00000032849) #29	CDC5L (ENSMLEG00000030582) #31	SUPT3H (ENSMLEG00000038549) #33	RUNX2 (ENSMLEG00000029720) #35	CLIC5 (ENSMLEG00000028897) #36	ENPP4 (ENSMLEG00000035378) #37	ENSMLEG00000043859	ENPP5 (ENSMLEG00000025172)
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00940000161543.e	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048.i #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000005085	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000001158	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Cebidae	ANCESTRAL SPECIES	5	ENSGT00940000161543.e	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048.i #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000005085	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a.l #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000001158	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Cebidae_a	ANCESTRAL SPECIES	25	ENSGT00940000161543.e	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048.i #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000005085	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a.l #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000001158	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562
Bolivian squirrel monkey	MODERN SPECIES	49	LRRC73 (ENSSBOG00000029933) #7	YIPF3 (ENSSBOG00000020836) #8	POLR1C (ENSSBOG00000025735) #9	XPO5 (ENSSBOG00000004763) #10	POLH (ENSSBOG00000021399) #11	GTPBP2 (ENSSBOG00000033640) #12	MAD2L1BP (ENSSBOG00000029545) #14	RSPH9 (ENSSBOG00000031703) #15	MRPS18A (ENSSBOG00000019943) #16	ENSSBOG00000030789 #17	ENSSBOG00000029474	MRPL14 (ENSSBOG00000028248) #19	TMEM63B (ENSSBOG00000035379) #20	CAPN11 (ENSSBOG00000026495) #21	ENSSBOG00000033471	MYMX (ENSSBOG00000019228) #22	SLC29A1 (ENSSBOG00000025930) #23	ENSSBOG00000023571 ##24	SLC35B2 (ENSSBOG00000028774) #26	NFKBIE (ENSSBOG00000005172) #25	TMEM151B (ENSSBOG00000020161) #27	TCTE1 (ENSSBOG00000030713) #28	AARS2 (ENSSBOG00000018590) #18	SPATS1 (ENSSBOG00000035876) #29	CDC5L (ENSSBOG00000031265) #31	ENSSBOG00000023875	SUPT3H (ENSSBOG00000035860) #33	ENSSBOG00000020940	RUNX2 (ENSSBOG00000032519) #35	CLIC5 (ENSSBOG00000025831) #36	ENPP4 (ENSSBOG00000033707) #37
Marmoset	MODERN SPECIES	16	DLK2 (ENSCJAG00000005485)	TJAP1 (ENSCJAG00000005594)	LRRC73 (ENSCJAG00000005532) #7	YIPF3 (ENSCJAG00000005563) #8	XPO5 (ENSCJAG00000005612) #10	POLH (ENSCJAG00000005770) #11	GTPBP2 (ENSCJAG00000005800) #12	MAD2L1BP (ENSCJAG00000005854) #14	RSPH9 (ENSCJAG00000017374) #15	MRPS18A (ENSCJAG00000017382) #16	VEGFA (ENSCJAG00000012459) #17	MRPL14 (ENSCJAG00000012454) #19	TMEM63B (ENSCJAG00000012369) #20	CAPN11 (ENSCJAG00000012346) #21	ENSCJAG00000046846	MYMX (ENSCJAG00000022396) #22	SLC29A1 (ENSCJAG00000012328) #23	HSP90AB1 (ENSCJAG00000046966) #24	SLC35B2 (ENSCJAG00000046050) #26	NFKBIE (ENSCJAG00000062014) #25	TMEM151B (ENSCJAG00000012307) #27	TCTE1 (ENSCJAG00000012297) #28	AARS2 (ENSCJAG00000048207) #18	SPATS1 (ENSCJAG00000012267) #29	ENSCJAG00000055470	CDC5L (ENSCJAG00000012210) #31	ENSCJAG00000076205	SUPT3H (ENSCJAG00000012182) #33	RUNX2 (ENSCJAG00000012153) #35	CLIC5 (ENSCJAG00000039777) #36	ENSCJAG00000070584
Mas night monkey	MODERN SPECIES	882	YIPF3 (ENSANAG00000038223) #8	POLR1C (ENSANAG00000025805) #9	XPO5 (ENSANAG00000029648) #10	POLH (ENSANAG00000036689) #11	GTPBP2 (ENSANAG00000037352) #12	MAD2L1BP (ENSANAG00000031169) #14	RSPH9 (ENSANAG00000034070) #15	MRPS18A (ENSANAG00000030889) #16	ENSANAG00000019769	VEGFA (ENSANAG00000021825) #17	ENSANAG00000026877	MRPL14 (ENSANAG00000025052) #19	TMEM63B (ENSANAG00000025745) #20	ENSANAG00000022828	CAPN11 (ENSANAG00000021503) #21	MYMX (ENSANAG00000019285) #22	SLC29A1 (ENSANAG00000027374) #23	ENSANAG00000036841 ##24	SLC35B2 (ENSANAG00000030995) #26	NFKBIE (ENSANAG00000035565) #25	TCTE1 (ENSANAG00000037976) #28	TMEM151B (ENSANAG00000031535) #27	AARS2 (ENSANAG00000019918) #18	SPATS1 (ENSANAG00000025333) #29	CDC5L (ENSANAG00000028499) #31	ENSANAG00000038340	SUPT3H (ENSANAG00000035432) #33	RUNX2 (ENSANAG00000034292) #35	CLIC5 (ENSANAG00000028093) #36	ENPP4 (ENSANAG00000035380) #37	ENPP5 (ENSANAG00000016883)
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00910000147751
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00910000147751
Lemuriformes_a	ANCESTRAL SPECIES	4	ENSGT00940000160761	ENSGT00940000161543	ENSGT00390000003256 #7	ENSGT00940000153766.A #8	ENSGT00950000183100.B #9	ENSGT00940000153408.A #10	ENSGT00940000157048 #11	ENSGT00940000155636 #12	ENSGT00390000003812 #14	ENSGT00390000018686 #15	ENSGT00390000006493 #16	ENSGT00940000157284 #17	ENSGT00390000001121 #19	ENSGT00940000157084 #20	ENSGT00940000158672 #21	ENSGT00490000044373 #22	ENSGT00950000182898.a.a.a.a.b #23	ENSGT01020000230401.a.a.a.i.a.a #24	ENSGT00940000157927 #26	ENSGT00940000159120 #25	ENSGT00390000013762.b.a #27	ENSGT00940000159341 #28	ENSGT00940000158246 #18	ENSGT00390000006786 #29	ENSGT00550000074922 #31	ENSGT00390000010738 #33	ENSGT00940000160171 #35	ENSGT00940000156406.b #36	ENSGT00940000158831 #37	ENSGT00940000160562	ENSGT00910000147751
Greater bamboo lemur	MODERN SPECIES	305	DLK2 (ENSPSMG00000017798)	TJAP1 (ENSPSMG00000017881)	LRRC73 (ENSPSMG00000017951) #7	YIPF3 (ENSPSMG00000017965) #8	POLR1C (ENSPSMG00000018003) #9	XPO5 (ENSPSMG00000018128) #10	POLH (ENSPSMG00000018199) #11	GTPBP2 (ENSPSMG00000018214) #12	MAD2L1BP (ENSPSMG00000018221) #14	RSPH9 (ENSPSMG00000018228) #15	MRPS18A (ENSPSMG00000018246) #16	VEGFA (ENSPSMG00000018375) #17	MRPL14 (ENSPSMG00000018525) #19	TMEM63B (ENSPSMG00000018668) #20	CAPN11 (ENSPSMG00000018791) #21	MYMX (ENSPSMG00000018800) #22	SLC29A1 (ENSPSMG00000018858) #23	HSP90AB1 (ENSPSMG00000018961) #24	SLC35B2 (ENSPSMG00000019040) #26	NFKBIE (ENSPSMG00000019044) #25	TMEM151B (ENSPSMG00000019047) #27	TCTE1 (ENSPSMG00000019053) #28	AARS2 (ENSPSMG00000019100) #18	SPATS1 (ENSPSMG00000019112) #29	CDC5L (ENSPSMG00000019139) #31	SUPT3H (ENSPSMG00000019156) #33	RUNX2 (ENSPSMG00000019192) #35	CLIC5 (ENSPSMG00000019221) #36	ENPP4 (ENSPSMG00000019241) #37	ENPP5 (ENSPSMG00000019246)	ENSPSMG00000019249