Muroidea ANCESTRAL SPECIES 42 ENSGT00940000160761 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 ENSGT00390000006493 ENSGT00940000157284 ENSGT00390000001121 ENSGT00940000157084 ENSGT00940000158672 ENSGT00490000044373 #22 ENSGT00950000182898.a.a.a.a.b ENSGT01020000230401.a.a.a.i.a.a ENSGT00940000157927 ENSGT00940000159120 ENSGT00390000013762.b.a ENSGT00940000159341 ENSGT00940000158246 ENSGT00390000006786 ENSGT00550000074922 ENSGT00390000010738 ENSGT00940000160171 ENSGT00940000156406.b ENSGT00940000158831 ENSGT00940000160562 ENSGT00940000159767 Muroidea_A ANCESTRAL SPECIES 8 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 ENSGT00390000006493 ENSGT00940000157284 ENSGT00860000135742 ENSGT00390000001121 ENSGT00940000157084 ENSGT00940000158672 ENSGT00490000044373 #22 ENSGT00950000182898.a.a.a.a.b ENSGT01020000230401.a.a.a.i.a.a ENSGT00940000157927 ENSGT00940000159120 ENSGT00390000013762.b.a ENSGT00940000159341 ENSGT00940000158246 ENSGT00390000006786 ENSGT00550000074922 ENSGT00390000010738 ENSGT00390000016534.A ENSGT00980000198488.m.a.b.a.b.a.b.b.b.a ENSGT00940000160171 ENSGT00940000156406.b ENSGT00940000158831 Cricetidae ANCESTRAL SPECIES 9 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 ENSGT00390000006493 ENSGT00940000157284 ENSGT00860000135742 ENSGT00390000001121 ENSGT00940000157084 ENSGT00940000158672 ENSGT00490000044373 #22 ENSGT00950000182898.a.a.a.a.b ENSGT01020000230401.a.a.a.i.a.a ENSGT00940000157927 ENSGT00940000159120 ENSGT00390000013762.b.a ENSGT00940000159341 ENSGT00940000158246 ENSGT00390000006786 ENSGT00550000074922 ENSGT00390000010738 ENSGT00940000160171 ENSGT00940000156406.b ENSGT00940000158831 ENSGT00940000160562 ENSGT00940000159767 Cricetinae ANCESTRAL SPECIES 28 ENSGT00940000160761 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 ENSGT00390000006493 ENSGT00940000157284 ENSGT00390000001121 ENSGT00940000157084 ENSGT00940000158672 ENSGT00490000044373 #22 ENSGT00950000182898.a.a.a.a.b ENSGT01020000230401.a.a.a.i.a.a ENSGT00940000157927 ENSGT00940000159120 ENSGT00390000013762.b.a ENSGT00940000159341 ENSGT00940000158246 ENSGT00390000006786 ENSGT00550000074922 ENSGT00390000010738 ENSGT00940000160171 ENSGT00940000156406.b ENSGT00940000158831 ENSGT00940000160562 ENSGT00940000159767 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 401 Rabep2 (ENSCGRG00001019856) #7 Cd19 (ENSCGRG00001001638) #8 Nfatc2ip (ENSCGRG00001023795) #9 Spns1 (ENSCGRG00001020734) #10 Lat (ENSCGRG00001018116) #11 Sbk1 (ENSCGRG00001022461) #12 Xpo6 (ENSCGRG00001013173) #13 Gsg1l (ENSCGRG00001019110) #14 Katnip (ENSCGRG00001018820) #15 Gtf3c1 (ENSCGRG00001003866) #16 Il21r (ENSCGRG00001014015) #17 Il4ra (ENSCGRG00001009994) #18 Nsmce1 (ENSCGRG00001018753) #19 Kdm8 (ENSCGRG00001017571) #20 Hs3st4 (ENSCGRG00001016433) #21 ENSCGRG00001009250 #22 Zkscan2 (ENSCGRG00001022665) #23 Aqp8 (ENSCGRG00001024067) #24 Lcmt1 (ENSCGRG00001017343) #25 Arhgap17 (ENSCGRG00001016451) #26 Slc5a11 (ENSCGRG00001023714) #27 Tnrc6a (ENSCGRG00001015021) #28 Rbbp6 (ENSCGRG00001017193) #29 Cacng3 (ENSCGRG00001019756) #30 Prkcb (ENSCGRG00001010289) #31 Chp2 (ENSCGRG00001017404) #32 Ern2 (ENSCGRG00001019098) #33 Plk1 (ENSCGRG00001021855) #34 Dctn5 (ENSCGRG00001019871) #35 Palb2 (ENSCGRG00001010961) #36 Ndufab1 (ENSCGRG00001005503) #37 Chinese hamster chok1gshd MODERN SPECIES 165 Mrps18a (ENSCGRG00001017882) Vegfa (ENSCGRG00001021125) Mrpl14 (ENSCGRG00001013490) Tmem63b (ENSCGRG00001023855) ENSCGRG00001021384 ##22 Slc29a1 (ENSCGRG00001023604) Hsp90ab1 (ENSCGRG00001021336) ENSCGRG00001017772 Nfkbie (ENSCGRG00001013839) Tmem151b (ENSCGRG00001003709) Tcte1 (ENSCGRG00001023961) Aars2 (ENSCGRG00001006954) ENSCGRG00001000421 Spats1 (ENSCGRG00001021482) ENSCGRG00001019419 Supt3 (ENSCGRG00001012497) Runx2 (ENSCGRG00001008399) ENSCGRG00001006293 Enpp4 (ENSCGRG00001000243) Enpp5 (ENSCGRG00001021901) Cricetidae_B ANCESTRAL SPECIES 32 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 ENSGT00390000006493 ENSGT00940000157284 ENSGT00860000135742 ENSGT00390000001121 ENSGT00940000157084 ENSGT00940000158672 ENSGT00490000044373 #22 ENSGT00950000182898.a.a.a.a.b ENSGT01020000230401.a.a.a.i.a.a ENSGT00940000157927 ENSGT00940000159120 ENSGT00390000013762.b.a ENSGT00940000159341 ENSGT00940000158246 ENSGT00390000006786 ENSGT00550000074922 ENSGT00390000010738 ENSGT00390000016534.A ENSGT00940000160171 ENSGT00940000156406.b ENSGT00940000158831 ENSGT00940000160562 Northern American deer mouse MODERN SPECIES 13 Dlk2 (ENSPEMG00000014891) Tjap1 (ENSPEMG00000000063) Lrrc73 (ENSPEMG00000010422) Yipf3 (ENSPEMG00000013680) Polr1c (ENSPEMG00000006970) Xpo5 (ENSPEMG00000020387) Polh (ENSPEMG00000014884) Gtpbp2 (ENSPEMG00000021976) Mad2l1bp (ENSPEMG00000003113) Rsph9 (ENSPEMG00000011206) Mrps18a (ENSPEMG00000000405) Vegfa (ENSPEMG00000023496) ENSPEMG00000007451 Tmem63b (ENSPEMG00000020790) Capn11 (ENSPEMG00000016267) Mymx (ENSPEMG00000031136) #22 Slc29a1 (ENSPEMG00000012099) ENSPEMG00000020801 Slc35b2 (ENSPEMG00000010433) Nfkbie (ENSPEMG00000009911) Tmem151b (ENSPEMG00000020728) Tcte1 (ENSPEMG00000016228) Aars2 (ENSPEMG00000022933) Spats1 (ENSPEMG00000015089) ENSPEMG00000007860 ENSPEMG00000019806 ENSPEMG00000026605 Runx2 (ENSPEMG00000024867) ENSPEMG00000025325 Enpp4 (ENSPEMG00000025230) Enpp5 (ENSPEMG00000009544) Prairie vole MODERN SPECIES 352 Smap1 (ENSMOCG00000012663) B3gat2 (ENSMOCG00000008496) ENSMOCG00000008718 Rims1 (ENSMOCG00000016536) Kcnq5 (ENSMOCG00000020453) ENSMOCG00000020341 ENSMOCG00000005557 ENSMOCG00000004441 Rsph9 (ENSMOCG00000002026) ENSMOCG00000021207 Vegfa (ENSMOCG00000003577) 1600014C23Rik (ENSMOCG00000015577) Mrpl14 (ENSMOCG00000013481) Tmem63b (ENSMOCG00000014333) Capn11 (ENSMOCG00000012508) Mymx (ENSMOCG00000015430) #22 Slc29a1 (ENSMOCG00000020636) Hsp90ab1 (ENSMOCG00000018428) Slc35b2 (ENSMOCG00000016485) Nfkbie (ENSMOCG00000005380) Tmem151b (ENSMOCG00000022994) Tcte1 (ENSMOCG00000015670) Aars2 (ENSMOCG00000016383) Spats1 (ENSMOCG00000012845) ENSMOCG00000022910 Supt3 (ENSMOCG00000001470) Runx2 (ENSMOCG00000008760) ENSMOCG00000011235 Enpp4 (ENSMOCG00000020772) Enpp5 (ENSMOCG00000022512) Rcan2 (ENSMOCG00000020179) Murinae ANCESTRAL SPECIES 9 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 ENSGT00390000006493 ENSGT00940000157284 ENSGT00860000135742 ENSGT00390000001121 ENSGT00940000157084 ENSGT00940000158672 ENSGT00490000044373 #22 ENSGT00950000182898.a.a.a.a.b ENSGT01020000230401.a.a.a.i.a.a ENSGT00940000157927 ENSGT00940000159120 ENSGT00390000013762.b.a ENSGT00940000159341 ENSGT00940000158246 ENSGT00390000006786 ENSGT00550000074922 ENSGT00390000010738 ENSGT00390000016534.A ENSGT00980000198488.m.a.b.a.b.a.b.b.b.a ENSGT00940000160171 ENSGT00940000156406.b ENSGT00940000158831 Mus ANCESTRAL SPECIES 16 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 ENSGT00390000006493 ENSGT00940000157284 ENSGT00860000135742 ENSGT00390000001121 ENSGT00940000157084 ENSGT00940000158672 ENSGT00490000044373 #22 ENSGT00950000182898.a.a.a.a.b ENSGT01020000230401.a.a.a.i.a.a ENSGT00940000157927 ENSGT00940000159120 ENSGT00390000013762.b.a ENSGT00940000159341 ENSGT00940000158246 ENSGT00390000006786 ENSGT00940000168197 ENSGT00550000074922 ENSGT00390000010738 ENSGT00940000160171 ENSGT00940000156406.b ENSGT00940000158831 ENSGT00940000160562 Mus_A ANCESTRAL SPECIES 10 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 ENSGT00390000006493 ENSGT00940000157284 ENSGT00860000135742 ENSGT00390000001121 ENSGT00940000157084 ENSGT00940000158672 ENSGT00490000044373 #22 ENSGT00950000182898.a.a.a.a.b ENSGT01020000230401.a.a.a.i.a.a ENSGT00940000157927 ENSGT00940000159120 ENSGT00390000013762.b.a ENSGT00940000159341 ENSGT00940000158246 ENSGT00390000006786 ENSGT00550000074922.e.a ENSGT00390000010738 ENSGT00940000160171 ENSGT00940000156406.b ENSGT00940000158831 ENSGT00940000160562 ENSGT00940000159767 Mus_B ANCESTRAL SPECIES 9 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 ENSGT00390000006493 ENSGT00940000157284 ENSGT00860000135742 ENSGT00390000001121 ENSGT00940000157084 ENSGT00940000158672 ENSGT00490000044373 #22 ENSGT00950000182898.a.a.a.a.b ENSGT01020000230401.a.a.a.i.a.a ENSGT00940000157927 ENSGT00940000159120 ENSGT00390000013762.b.a ENSGT00940000159341 ENSGT00940000158246 ENSGT00390000006786 ENSGT00550000074922.e.a ENSGT00390000010738 ENSGT00940000160171 ENSGT00940000156406.b ENSGT00940000158831 ENSGT00940000160562 ENSGT00940000159767 Mus_C ANCESTRAL SPECIES 9 ENSGT00940000161543 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00950000183100.B ENSGT00940000153408.A ENSGT00940000157048 ENSGT00940000155636 ENSGT00390000003812 ENSGT00390000018686 ENSGT00390000006493 ENSGT00940000157284 ENSGT00860000135742 ENSGT00390000001121 ENSGT00940000157084 ENSGT00940000158672 ENSGT00490000044373 #22 ENSGT00950000182898.a.a.a.a.b ENSGT01020000230401.a.a.a.i.a.a ENSGT00940000157927 ENSGT00940000159120 ENSGT00390000013762.b.a ENSGT00940000159341 ENSGT00940000158246 ENSGT00390000006786 ENSGT00550000074922.f ENSGT00390000010738 ENSGT00940000160171 ENSGT00940000156406.b ENSGT00940000158831 ENSGT00940000160562 ENSGT00940000159767 spretus MODERN SPECIES 8 Tjap1 (MGP_SPRETEiJ_G0022577) Lrrc73 (MGP_SPRETEiJ_G0022576) Yipf3 (MGP_SPRETEiJ_G0022575) Polr1c (MGP_SPRETEiJ_G0022574) Xpo5 (MGP_SPRETEiJ_G0022573) Polh (MGP_SPRETEiJ_G0022572) Gtpbp2 (MGP_SPRETEiJ_G0022571) Mad2l1bp (MGP_SPRETEiJ_G0022570) Rsph9 (MGP_SPRETEiJ_G0022569) Mrps18a (MGP_SPRETEiJ_G0022568) Vegfa (MGP_SPRETEiJ_G0022567) 1600014C23Rik (MGP_SPRETEiJ_G0022566) Mrpl14 (MGP_SPRETEiJ_G0022565) Tmem63b (MGP_SPRETEiJ_G0022564) Capn11 (MGP_SPRETEiJ_G0022563) Mymx (MGP_SPRETEiJ_G0022562) #22 Slc29a1 (MGP_SPRETEiJ_G0022561) Hsp90ab1 (MGP_SPRETEiJ_G0022560) Slc35b2 (MGP_SPRETEiJ_G0022559) Nfkbie (MGP_SPRETEiJ_G0022558) Tmem151b (MGP_SPRETEiJ_G0022557) Tcte1 (MGP_SPRETEiJ_G0022556) Aars2 (MGP_SPRETEiJ_G0022555) MGP_SPRETEiJ_G0022554 MGP_SPRETEiJ_G0022553 Supt3 (MGP_SPRETEiJ_G0022552) Runx2 (MGP_SPRETEiJ_G0022551) MGP_SPRETEiJ_G0022550 Enpp4 (MGP_SPRETEiJ_G0022549) Enpp5 (MGP_SPRETEiJ_G0022548) Rcan2 (MGP_SPRETEiJ_G0022547) Steppe mouse MODERN SPECIES 3324 Tmem63b (ENSMSIG00000023301) Capn11 (ENSMSIG00000023352) Mymx (ENSMSIG00000023403) #22 Slc29a1 (ENSMSIG00000023420) ENSMSIG00000023496 Slc35b2 (ENSMSIG00000023500) Nfkbie (ENSMSIG00000023528) Tmem151b (ENSMSIG00000023557) Tcte1 (ENSMSIG00000023567) Aars2 (ENSMSIG00000023583) Spats1 (ENSMSIG00000023603) ENSMSIG00000023672 ENSMSIG00000023679 Cdc5l (ENSMSIG00000023681) ENSMSIG00000023729 Supt3 (ENSMSIG00000023732) ENSMSIG00000023769 ENSMSIG00000023907 Mouse MODERN SPECIES 8 Tjap1 (ENSMUSG00000012296) Lrrc73 (ENSMUSG00000071073) Yipf3 (ENSMUSG00000071074) Polr1c (ENSMUSG00000067148) Xpo5 (ENSMUSG00000067150) Polh (ENSMUSG00000023953) Gtpbp2 (ENSMUSG00000023952) Mad2l1bp (ENSMUSG00000034509) Rsph9 (ENSMUSG00000023966) Mrps18a (ENSMUSG00000023967) Vegfa (ENSMUSG00000023951) 1600014C23Rik (ENSMUSG00000094690) Mrpl14 (ENSMUSG00000023939) Tmem63b (ENSMUSG00000036026) Capn11 (ENSMUSG00000058626) Mymx (ENSMUSG00000079471) #22 Slc29a1 (ENSMUSG00000023942) Hsp90ab1 (ENSMUSG00000023944) Slc35b2 (ENSMUSG00000037089) Nfkbie (ENSMUSG00000023947) Tmem151b (ENSMUSG00000096847) Tcte1 (ENSMUSG00000023949) Aars2 (ENSMUSG00000023938) Spats1 (ENSMUSG00000023935) Cdc5l (ENSMUSG00000023932) Supt3 (ENSMUSG00000038954) Runx2 (ENSMUSG00000039153) Clic5 (ENSMUSG00000023959) Enpp4 (ENSMUSG00000023961) Enpp5 (ENSMUSG00000023960) Rcan2 (ENSMUSG00000039601) Ryukyu mouse MODERN SPECIES 8 Tjap1 (MGP_CAROLIEiJ_G0021665) Lrrc73 (MGP_CAROLIEiJ_G0021664) Yipf3 (MGP_CAROLIEiJ_G0021663) Polr1c (MGP_CAROLIEiJ_G0021662) Xpo5 (MGP_CAROLIEiJ_G0021661) Polh (MGP_CAROLIEiJ_G0021660) Gtpbp2 (MGP_CAROLIEiJ_G0021659) Mad2l1bp (MGP_CAROLIEiJ_G0021658) Rsph9 (MGP_CAROLIEiJ_G0021657) Mrps18a (MGP_CAROLIEiJ_G0021656) MGP_CAROLIEiJ_G0021655 MGP_CAROLIEiJ_G0021654 Mrpl14 (MGP_CAROLIEiJ_G0021653) Tmem63b (MGP_CAROLIEiJ_G0021652) Capn11 (MGP_CAROLIEiJ_G0021651) MGP_CAROLIEiJ_G0021650 #22 Slc29a1 (MGP_CAROLIEiJ_G0021649) Hsp90ab1 (MGP_CAROLIEiJ_G0021648) Slc35b2 (MGP_CAROLIEiJ_G0021647) Nfkbie (MGP_CAROLIEiJ_G0021646) Tmem151b (MGP_CAROLIEiJ_G0021645) Tcte1 (MGP_CAROLIEiJ_G0021644) Aars2 (MGP_CAROLIEiJ_G0021643) MGP_CAROLIEiJ_G0021642 Cdc5l (MGP_CAROLIEiJ_G0021641) Supt3 (MGP_CAROLIEiJ_G0021640) Runx2 (MGP_CAROLIEiJ_G0021639) MGP_CAROLIEiJ_G0021638 Enpp4 (MGP_CAROLIEiJ_G0021637) Enpp5 (MGP_CAROLIEiJ_G0021636) Rcan2 (MGP_CAROLIEiJ_G0021635) Shrew mouse MODERN SPECIES 9 MGP_PahariEiJ_G0020657 Lrrc73 (MGP_PahariEiJ_G0020656) Yipf3 (MGP_PahariEiJ_G0020655) Polr1c (MGP_PahariEiJ_G0020654) Xpo5 (MGP_PahariEiJ_G0020653) Polh (MGP_PahariEiJ_G0020652) Gtpbp2 (MGP_PahariEiJ_G0020651) Mad2l1bp (MGP_PahariEiJ_G0020650) Rsph9 (MGP_PahariEiJ_G0020649) Mrps18a (MGP_PahariEiJ_G0020648) Vegfa (MGP_PahariEiJ_G0020647) 1600014C23Rik (MGP_PahariEiJ_G0020646) Mrpl14 (MGP_PahariEiJ_G0020645) Tmem63b (MGP_PahariEiJ_G0020644) Capn11 (MGP_PahariEiJ_G0020643) MGP_PahariEiJ_G0020642 #22 Slc29a1 (MGP_PahariEiJ_G0020641) MGP_PahariEiJ_G0020640 Slc35b2 (MGP_PahariEiJ_G0020639) Nfkbie (MGP_PahariEiJ_G0020638) Tmem151b (MGP_PahariEiJ_G0020637) Tcte1 (MGP_PahariEiJ_G0020636) Aars2 (MGP_PahariEiJ_G0020635) MGP_PahariEiJ_G0020634 MGP_PahariEiJ_G0020633 Supt3 (MGP_PahariEiJ_G0020632) Runx2 (MGP_PahariEiJ_G0020631) MGP_PahariEiJ_G0020630 Enpp4 (MGP_PahariEiJ_G0020629) Enpp5 (MGP_PahariEiJ_G0020628) Rcan2 (MGP_PahariEiJ_G0020627) Rat MODERN SPECIES 19 Lrrc73 (ENSRNOG00000039856) Yipf3 (ENSRNOG00000018998) Polr1c (ENSRNOG00000019079) Xpo5 (ENSRNOG00000019085) Polh (ENSRNOG00000019195) Gtpbp2 (ENSRNOG00000019332) Rps2-ps6 (ENSRNOG00000022934) Mad2l1bp (ENSRNOG00000019463) Rsph9 (ENSRNOG00000019474) Mrps18a (ENSRNOG00000019511) Vegfa (ENSRNOG00000019598) Aars2 (ENSRNOG00000025808) Mrpl14 (ENSRNOG00000019734) Tmem63b (ENSRNOG00000019743) Capn11 (ENSRNOG00000026025) Mymx (ENSRNOG00000042497) #22 Slc29a1 (ENSRNOG00000019752) Hsp90ab1 (ENSRNOG00000019834) Nfkbie (ENSRNOG00000019907) Slc35b2 (ENSRNOG00000019900) Tmem151b (ENSRNOG00000019961) Tcte1 (ENSRNOG00000065569) Spats1 (ENSRNOG00000019963) LOC103690502 (ENSRNOG00000064080) Cdc5l (ENSRNOG00000019975) LOC102551267 (ENSRNOG00000049311) Supt3h (ENSRNOG00000020153) Znrd1as (ENSRNOG00000020166) Runx2 (ENSRNOG00000020193) Clic5 (ENSRNOG00000047218) Enpp4 (ENSRNOG00000010174)