Percomorphaceae ANCESTRAL SPECIES 26 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00730000111080.b ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e ENSGT00940000164048 Percomorphaceae_B ANCESTRAL SPECIES 11 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00730000111080.b ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Percomorphaceae_C ANCESTRAL SPECIES 12 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT01010000222987 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b Percomorphaceae_D ANCESTRAL SPECIES 10 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Anabantaria ANCESTRAL SPECIES 10 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Anabantoidei ANCESTRAL SPECIES 9 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT00940000162258 #25 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b Siamese fighting fish MODERN SPECIES 12 hdac1 (ENSBSLG00000016101) #7 lck (ENSBSLG00000016810) #8 FAM167B (ENSBSLG00000017790) #9 zgc:154055 (ENSBSLG00000017797) #10 tdh2 (ENSBSLG00000017861) #11 srrm1 (ENSBSLG00000017886) #12 clic4 (ENSBSLG00000018180) #13 runx3 (ENSBSLG00000018252) #14 syf2 (ENSBSLG00000018444) #15 rsrp1 (ENSBSLG00000018739) #16 mgst3b (ENSBSLG00000018776) #17 rhd (ENSBSLG00000018823) #18 maco1b (ENSBSLG00000018887) #19 ldlrap1b (ENSBSLG00000019083) #20 FNDC5 (ENSBSLG00000019113) #21 olig4 (ENSBSLG00000019137) #22 bsdc1 (ENSBSLG00000019144) #23 marcksl1a (ENSBSLG00000019167) #24 lgals9l3 (ENSBSLG00000019171) #25 gjb9a (ENSBSLG00000019191) #26 ptp4a2a (ENSBSLG00000019269) #27 ppp1r13ba (ENSBSLG00000019276) #28 SYT14 (ENSBSLG00000019426) #29 ENSBSLG00000019501 #30 gnmt (ENSBSLG00000019509) #31 ENSBSLG00000019521 #32 ENSBSLG00000019524 #33 zgc:136872 (ENSBSLG00000019533) #34 ENSBSLG00000019587 #35 ak7b (ENSBSLG00000019595) #36 galcb (ENSBSLG00000019867) #37 Climbing perch MODERN SPECIES 3 ENSATEG00000028195 #9 zgc:154055 (ENSATEG00000007588) #10 srrm1 (ENSATEG00000007659) #12 clic4 (ENSATEG00000007667) #13 runx3 (ENSATEG00000007690) #14 syf2 (ENSATEG00000007745) #15 rsrp1 (ENSATEG00000007775) #16 mgst3b (ENSATEG00000007790) #17 tmem50a (ENSATEG00000029516) rhd (ENSATEG00000007803) #18 maco1b (ENSATEG00000007893) #19 ldlrap1b (ENSATEG00000007960) #20 ENSATEG00000027396 ENSATEG00000026518 ENSATEG00000025931 #21 olig4 (ENSATEG00000008034) #22 bsdc1 (ENSATEG00000008054) #23 marcksl1a (ENSATEG00000008112) #24 ENSATEG00000008120 #25 gjb9a (ENSATEG00000008124) #26 ptp4a2a (ENSATEG00000008130) #27 ppp1r13ba (ENSATEG00000008154) #28 sdsl (ENSATEG00000008194) ENSATEG00000008223 #29 ENSATEG00000025843 #30 ENSATEG00000008278 #31 ENSATEG00000026610 #32 ENSATEG00000025286 #33 ENSATEG00000008301 #34 ENSATEG00000008352 ##34 ENSATEG00000008377 Carangaria ANCESTRAL SPECIES 10 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Pleuronectoidei ANCESTRAL SPECIES 5 ENSGT00940000159864 #8 ENSGT00940000159693.d #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 ENSGT00950000182863.B.b Turbot MODERN SPECIES 8 ENSSMAG00000028036 #9 zgc:154055 (ENSSMAG00000009244) #10 tdh2 (ENSSMAG00000009271) #11 srrm1 (ENSSMAG00000009318) #12 clic4 (ENSSMAG00000009357) #13 runx3 (ENSSMAG00000021897) #14 syf2 (ENSSMAG00000024059) #15 mgst3b (ENSSMAG00000009885) #17 tmem50a (ENSSMAG00000009890) rhd (ENSSMAG00000009917) #18 maco1b (ENSSMAG00000009947) #19 ldlrap1b (ENSSMAG00000009986) #20 ENSSMAG00000026960 ENSSMAG00000028343 ENSSMAG00000010027 #21 olig4 (ENSSMAG00000010052) #22 bsdc1 (ENSSMAG00000010066) #23 marcksl1a (ENSSMAG00000010138) #24 gjb9a (ENSSMAG00000010142) #26 ptp4a2a (ENSSMAG00000010150) #27 ppp1r13ba (ENSSMAG00000010173) #28 sdsl (ENSSMAG00000010215) ENSSMAG00000010247 #29 ENSSMAG00000031701 #30 ENSSMAG00000024042 #31 ENSSMAG00000010303 #32 ENSSMAG00000010315 #33 ENSSMAG00000010414 ##34 ENSSMAG00000010442 ENSSMAG00000010482 ENSSMAG00000010532 Carangaria_A ANCESTRAL SPECIES 4 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Barramundi perch MODERN SPECIES 129 FAM167B (ENSLCAG00010011923) #9 zgc:154055 (ENSLCAG00010011863) #10 tdh2 (ENSLCAG00010011849) #11 srrm1 (ENSLCAG00010011840) #12 clic4 (ENSLCAG00010011814) #13 runx3 (ENSLCAG00010011770) #14 syf2 (ENSLCAG00010011759) #15 ENSLCAG00010011754 mgst3b (ENSLCAG00010011747) #17 tmem50a (ENSLCAG00010011739) rhd (ENSLCAG00010011733) #18 maco1b (ENSLCAG00010011724) #19 ldlrap1b (ENSLCAG00010011719) #20 ENSLCAG00010011716 FNDC5 (ENSLCAG00010011711) #21 olig4 (ENSLCAG00010011705) #22 bsdc1 (ENSLCAG00010011696) #23 marcksl1a (ENSLCAG00010011692) #24 gjb9a (ENSLCAG00010011689) #26 ptp4a2a (ENSLCAG00010011688) #27 ENSLCAG00010011646 sdsl (ENSLCAG00010011624) SYT14 (ENSLCAG00010011616) #29 ENSLCAG00010011609 #30 gnmt (ENSLCAG00010011596) #31 ENSLCAG00010011588 #32 ENSLCAG00010011584 ENSLCAG00010011577 #34 ENSLCAG00010011567 ENSLCAG00010011558 ##34 Seriola ANCESTRAL SPECIES 3 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Greater amberjack MODERN SPECIES 62 FAM167B (ENSSDUG00000012905) #9 zgc:154055 (ENSSDUG00000012910) #10 tdh2 (ENSSDUG00000012947) #11 srrm1 (ENSSDUG00000012967) #12 clic4 (ENSSDUG00000013016) #13 runx3 (ENSSDUG00000013044) #14 syf2 (ENSSDUG00000013072) #15 rsrp1 (ENSSDUG00000013092) #16 mgst3b (ENSSDUG00000013105) #17 tmem50a (ENSSDUG00000013127) rhd (ENSSDUG00000013165) #18 maco1b (ENSSDUG00000013187) #19 ldlrap1b (ENSSDUG00000013252) #20 ENSSDUG00000013272 FNDC5 (ENSSDUG00000013304) #21 olig4 (ENSSDUG00000013329) #22 bsdc1 (ENSSDUG00000013350) #23 marcksl1a (ENSSDUG00000013400) #24 gjb9a (ENSSDUG00000013410) #26 ptp4a2a (ENSSDUG00000013423) #27 ppp1r13ba (ENSSDUG00000013441) #28 sdsl (ENSSDUG00000013480) SYT14 (ENSSDUG00000013495) #29 ENSSDUG00000013511 #30 gnmt (ENSSDUG00000013522) #31 ENSSDUG00000013542 #32 ENSSDUG00000013550 #33 ENSSDUG00000013563 #34 ENSSDUG00000013642 ##34 ENSSDUG00000013705 TPO (ENSSDUG00000013763) Yellowtail amberjack MODERN SPECIES 3061 gosr1 (ENSSLDG00000016702) CPD (ENSSLDG00000016747) cryba1a (ENSSLDG00000016828) crybb1l3 (ENSSLDG00000016850) UNC119 (ENSSLDG00000016875) foxn1 (ENSSLDG00000016894) SLC13A2 (ENSSLDG00000016915) slc46a1 (ENSSLDG00000016953) sarm1 (ENSSLDG00000016978) vtna (ENSSLDG00000017013) SCARF1 (ENSSLDG00000017040) ENSSLDG00000017067 prpf8 (ENSSLDG00000017096) ENSSLDG00000017177 FNDC5 (ENSSLDG00000017194) #21 olig4 (ENSSLDG00000017211) #22 bsdc1 (ENSSLDG00000017231) #23 marcksl1a (ENSSLDG00000017284) #24 gjb9a (ENSSLDG00000017296) #26 ptp4a2a (ENSSLDG00000017310) #27 ppp1r13ba (ENSSLDG00000017348) #28 sdsl (ENSSLDG00000017434) SYT14 (ENSSLDG00000017452) #29 ENSSLDG00000017470 #30 gnmt (ENSSLDG00000017480) #31 ENSSLDG00000017498 ENSSLDG00000017523 #33 ENSSLDG00000017552 ##34 ENSSLDG00000017605 Eupercaria ANCESTRAL SPECIES 9 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT01010000222987 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b Tetraodontidae ANCESTRAL SPECIES 45 ENSGT00940000157706 ENSGT00940000154459.B ENSGT00940000153916.B ENSGT01030000234517.B.b ENSGT00940000154164.c.a ENSGT00940000153498.B.b ENSGT00390000010827 ENSGT00390000009366 ENSGT00390000013762.b.a.a.b ENSGT00390000000709 ENSGT00940000162520.g.a ENSGT00940000162520.h ENSGT00390000015369.d ENSGT00940000166933 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT01010000222987 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 Tetraodon MODERN SPECIES 1 ENSTNIG00000008908 ENSTNIG00000008909 CLIP4 (ENSTNIG00000008910) slc66a3 (ENSTNIG00000008911) rock2a (ENSTNIG00000008912) ENSTNIG00000008913 ENSTNIG00000000612 pdss2 (ENSTNIG00000008914) mtres1 (ENSTNIG00000001710) TMEM151B (ENSTNIG00000008916) utp25 (ENSTNIG00000008917) ENSTNIG00000008918 adprs (ENSTNIG00000008919) ENSTNIG00000008920 FNDC5 (ENSTNIG00000008921) #21 olig4 (ENSTNIG00000008922) #22 bsdc1 (ENSTNIG00000008923) #23 marcksl1a (ENSTNIG00000008924) #24 gjb9a (ENSTNIG00000008925) #26 ENSTNIG00000008926 #27 ppp1r13ba (ENSTNIG00000003062) #28 ENSTNIG00000003061 ATP6V1C2 (ENSTNIG00000001145) nol10 (ENSTNIG00000005411) odc1 (ENSTNIG00000002044) matn3b (ENSTNIG00000018776) wdr35 (ENSTNIG00000018775) fosl2 (ENSTNIG00000018774) babam2 (ENSTNIG00000018773) rbks (ENSTNIG00000018772) mrpl33 (ENSTNIG00000018771) Eupecaria_A ANCESTRAL SPECIES 10 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Ballan wrasse MODERN SPECIES 582 FNDC5 (ENSLBEG00000024162) #21 ENSLBEG00000024180 olig4 (ENSLBEG00000024195) #22 bsdc1 (ENSLBEG00000024206) #23 ENSLBEG00000024236 gjb9a (ENSLBEG00000024270) #26 ENSLBEG00000024294 #27 ENSLBEG00000024313 lrrc57 (ENSLBEG00000024333) tyro3 (ENSLBEG00000024362) ENSLBEG00000024407 ENSLBEG00000024444 ENSLBEG00000024465 atg14 (ENSLBEG00000024513) ENSLBEG00000024561 jmjd7 (ENSLBEG00000024583) fbxo34 (ENSLBEG00000024615) Eupecaria_B ANCESTRAL SPECIES 11 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Perciformes ANCESTRAL SPECIES 12 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT01030000238788 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Cottioidei ANCESTRAL SPECIES 8 ENSGT00940000159864 #8 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000167312 #33 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 ENSGT00950000182863.B.b ENSGT00640000091487 Lumpfish MODERN SPECIES 14 kiaa1109 (ENSCLMG00005012281) sntg2 (ENSCLMG00005012377) TPO (ENSCLMG00005012379) ENSCLMG00005012380 ENSCLMG00005012385 ##34 ENSCLMG00005012388 #33 gnmt (ENSCLMG00005012391) #31 ENSCLMG00005012394 #30 SYT14 (ENSCLMG00005012395) #29 sdsl (ENSCLMG00005012396) ENSCLMG00005012397 #28 ENSCLMG00005012398 #28 ptp4a2a (ENSCLMG00005002780) #27 ENSCLMG00005002783 FNDC5 (ENSCLMG00005002787) #21 olig4 (ENSCLMG00005002796) #22 bsdc1 (ENSCLMG00005002839) #23 marcksl1a (ENSCLMG00005003086) #24 gjb9a (ENSCLMG00005003088) #26 ldlrap1b (ENSCLMG00005003091) #20 maco1b (ENSCLMG00005003097) #19 rhd (ENSCLMG00005003121) #18 tmem50a (ENSCLMG00005003317) mgst3b (ENSCLMG00005003319) #17 syf2 (ENSCLMG00005003320) #15 runx3 (ENSCLMG00005003329) #14 ENSCLMG00005003398 #13 clic4 (ENSCLMG00005003400) #13 srrm1 (ENSCLMG00005003401) #12 tdh2 (ENSCLMG00005003405) #11 zgc:154055 (ENSCLMG00005003407) #10 Stickleback MODERN SPECIES 15 zgc:154055 (ENSGACG00000007250) #10 tdh2 (ENSGACG00000007260) #11 srrm1 (ENSGACG00000007266) #12 clic4 (ENSGACG00000007280) #13 runx3 (ENSGACG00000007301) #14 syf2 (ENSGACG00000007305) #15 ENSGACG00000007324 ENSGACG00000007326 mgst3b (ENSGACG00000007329) #17 tmem50a (ENSGACG00000007351) rhd (ENSGACG00000007369) #18 maco1b (ENSGACG00000007385) #19 ldlrap1b (ENSGACG00000007390) #20 ENSGACG00000007403 FNDC5 (ENSGACG00000007409) #21 olig4 (ENSGACG00000007415) #22 bsdc1 (ENSGACG00000007418) #23 marcksl1a (ENSGACG00000007455) #24 VASH1 (ENSGACG00000007467) ANGEL1 (ENSGACG00000007487) ENSGACG00000007494 ENSGACG00000007497 RPS6KL1 (ENSGACG00000007502) dlst (ENSGACG00000007509) prox2 (ENSGACG00000007538) ESRRB (ENSGACG00000007542) ENSGACG00000007548 IFT43 (ENSGACG00000007550) tgfb3 (ENSGACG00000007553) ENSGACG00000007580 ERG28 (ENSGACG00000007595) Perciformes_a ANCESTRAL SPECIES 10 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000158104 ENSGT00950000182863.B.b ENSGT00640000091487 ENSGT00390000005644 Channel bull blenny MODERN SPECIES 14 lck (ENSCGOG00000016815) #8 FAM167B (ENSCGOG00000017871) #9 zgc:154055 (ENSCGOG00000017873) #10 tdh2 (ENSCGOG00000017885) #11 srrm1 (ENSCGOG00000017889) #12 clic4 (ENSCGOG00000017897) #13 runx3 (ENSCGOG00000017921) #14 syf2 (ENSCGOG00000017928) #15 mgst3b (ENSCGOG00000017937) #17 rhd (ENSCGOG00000017981) #18 tmem50a (ENSCGOG00000017951) maco1b (ENSCGOG00000017988) #19 ldlrap1b (ENSCGOG00000018020) #20 ENSCGOG00000018025 FNDC5 (ENSCGOG00000018026) #21 olig4 (ENSCGOG00000018030) #22 bsdc1 (ENSCGOG00000018031) #23 marcksl1a (ENSCGOG00000018039) #24 adi1 (ENSCGOG00000018324) trappc12 (ENSCGOG00000018044) eipr1 (ENSCGOG00000018327) MYT1L (ENSCGOG00000018473) PXDN (ENSCGOG00000018753) CCR6 (ENSCGOG00000018914) ENSCGOG00000018922 rtn4ip1 (ENSCGOG00000019105) qrsl1 (ENSCGOG00000019314) iars2 (ENSCGOG00000019485) rab3gap2 (ENSCGOG00000019597) kcnk5a (ENSCGOG00000021156) KCNK16 (ENSCGOG00000021157) Pike perch MODERN SPECIES 79 zgc:154055 (ENSSLUG00000002052) #10 tdh2 (ENSSLUG00000002074) #11 srrm1 (ENSSLUG00000002086) #12 clic4 (ENSSLUG00000002105) #13 runx3 (ENSSLUG00000002117) #14 syf2 (ENSSLUG00000002140) #15 rsrp1 (ENSSLUG00000002153) #16 mgst3b (ENSSLUG00000002157) #17 tmem50a (ENSSLUG00000002163) rhd (ENSSLUG00000002172) #18 maco1b (ENSSLUG00000002181) #19 ldlrap1b (ENSSLUG00000002194) #20 ENSSLUG00000002202 FNDC5 (ENSSLUG00000002205) #21 ENSSLUG00000002214 olig4 (ENSSLUG00000002217) #22 bsdc1 (ENSSLUG00000002220) #23 marcksl1a (ENSSLUG00000002224) #24 gjb9a (ENSSLUG00000002238) #26 ptp4a2a (ENSSLUG00000002287) #27 ppp1r13ba (ENSSLUG00000002296) #28 sdsl (ENSSLUG00000002316) SYT14 (ENSSLUG00000002371) #29 gnmt (ENSSLUG00000002388) #31 ENSSLUG00000002398 #33 ENSSLUG00000002405 #34 ENSSLUG00000002414 #34 TPO (ENSSLUG00000002428) sntg2 (ENSSLUG00000002451) kiaa1109 (ENSSLUG00000002484) zgc:100846 (ENSSLUG00000002665) Eupecaria_C ANCESTRAL SPECIES 8 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Eupercaria_incertae_sedis ANCESTRAL SPECIES 16 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Large yellow croaker MODERN SPECIES 495 FAM167B (ENSLCRG00005016781) #9 zgc:154055 (ENSLCRG00005016782) #10 tdh2 (ENSLCRG00005016823) #11 srrm1 (ENSLCRG00005016826) #12 clic4 (ENSLCRG00005016832) #13 runx3 (ENSLCRG00005016842) #14 syf2 (ENSLCRG00005016873) #15 rsrp1 (ENSLCRG00005016885) #16 mgst3b (ENSLCRG00005016886) #17 tmem50a (ENSLCRG00005016888) rhd (ENSLCRG00005016890) #18 maco1b (ENSLCRG00005016897) #19 ldlrap1b (ENSLCRG00005016904) #20 ENSLCRG00005016905 FNDC5 (ENSLCRG00005016906) #21 olig4 (ENSLCRG00005016907) #22 bsdc1 (ENSLCRG00005016908) #23 marcksl1a (ENSLCRG00005016918) #24 gjb9a (ENSLCRG00005016919) #26 DNAL1 (ENSLCRG00005016920) DNAL1 (ENSLCRG00005016922) ptp4a2a (ENSLCRG00005016923) #27 ppp1r13ba (ENSLCRG00005016926) #28 SYT14 (ENSLCRG00005016927) #29 ENSLCRG00005016928 #30 gnmt (ENSLCRG00005016929) #31 ENSLCRG00005016930 #32 ENSLCRG00005016931 #33 ENSLCRG00005016932 #34 ENSLCRG00005016937 ##34 ENSLCRG00005016940 European seabass MODERN SPECIES 2 ENSDLAG00005000983 #7 lck (ENSDLAG00005000846) #8 ENSDLAG00005033832 #9 zgc:154055 (ENSDLAG00005000797) #10 tdh2 (ENSDLAG00005000791) #11 srrm1 (ENSDLAG00005000705) #12 clic4 (ENSDLAG00005000697) #13 runx3 (ENSDLAG00005000657) #14 syf2 (ENSDLAG00005000650) #15 tmem50a (ENSDLAG00005031778) rhd (ENSDLAG00005028729) #18 maco1b (ENSDLAG00005000593) #19 ldlrap1b (ENSDLAG00005026947) #20 ENSDLAG00005000581 ENSDLAG00005030085 #21 olig4 (ENSDLAG00005000573) #22 bsdc1 (ENSDLAG00005000507) #23 marcksl1a (ENSDLAG00005031981) #24 gjb9a (ENSDLAG00005027914) #26 ptp4a2a (ENSDLAG00005000483) #27 ppp1r13ba (ENSDLAG00005000472) #28 sdsl (ENSDLAG00005000464) ENSDLAG00005000451 #29 ENSDLAG00005034111 #30 ENSDLAG00005033628 #31 ENSDLAG00005000439 #32 ENSDLAG00005000436 #33 ENSDLAG00005005672 #34 ENSDLAG00005026655 ENSDLAG00005000405 ENSDLAG00005000393 Gilthead seabream MODERN SPECIES 7 FAM167B (ENSSAUG00010015513) #9 zgc:154055 (ENSSAUG00010015517) #10 tdh2 (ENSSAUG00010015527) #11 ENSSAUG00010015529 srrm1 (ENSSAUG00010015536) #12 clic4 (ENSSAUG00010015541) #13 runx3 (ENSSAUG00010015547) #14 syf2 (ENSSAUG00010015781) #15 mgst3b (ENSSAUG00010015792) #17 tmem50a (ENSSAUG00010015797) rhd (ENSSAUG00010015805) #18 maco1b (ENSSAUG00010015812) #19 ldlrap1b (ENSSAUG00010015832) #20 ENSSAUG00010015833 FNDC5 (ENSSAUG00010015834) #21 olig4 (ENSSAUG00010015837) #22 bsdc1 (ENSSAUG00010015840) #23 marcksl1a (ENSSAUG00010015988) #24 gjb9a (ENSSAUG00010015989) #26 ptp4a2a (ENSSAUG00010015990) #27 ppp1r13ba (ENSSAUG00010015991) #28 sdsl (ENSSAUG00010016002) SYT14 (ENSSAUG00010016742) #29 ENSSAUG00010016744 #30 gnmt (ENSSAUG00010016746) #31 ENSSAUG00010016747 #32 ENSSAUG00010016748 #33 ENSSAUG00010016749 #34 ENSSAUG00010016757 ##34 ENSSAUG00010016764 TPO (ENSSAUG00010016769) Ovalentaria ANCESTRAL SPECIES 10 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00730000111080.b ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Atherinomorphae ANCESTRAL SPECIES 11 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00730000111080.b ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845.f #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Cyprinodontiformes ANCESTRAL SPECIES 23 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845.f #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Aplocheiloidei ANCESTRAL SPECIES 61 ENSGT00940000159727 ENSGT00940000159137.b.a ENSGT00940000155999.e.a ENSGT00950000183024.a.a.b.q ENSGT00940000160847 ENSGT00390000003107.a ENSGT00940000163429.D ENSGT00530000063946.b ENSGT00940000157012.k ENSGT00940000161252.g ENSGT00950000183142.a.b.a.a ENSGT00950000182852.A.a.a.b ENSGT00390000004660.C.a.a.c ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845.e.a #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00950000182957.b.a.b.a.b Mangrove rivulus MODERN SPECIES 159 olig4 (ENSKMAG00000002127) #22 bsdc1 (ENSKMAG00000002159) #23 marcksl1a (ENSKMAG00000002181) #24 adi1 (ENSKMAG00000002192) trappc12 (ENSKMAG00000002223) eipr1 (ENSKMAG00000002298) MYT1L (ENSKMAG00000002343) PXDN (ENSKMAG00000002384) CCR6 (ENSKMAG00000002495) ENSKMAG00000002524 rtn4ip1 (ENSKMAG00000002560) qrsl1 (ENSKMAG00000002609) iars2 (ENSKMAG00000002679) rab3gap2 (ENSKMAG00000002793) kcnk5a (ENSKMAG00000002941) ENSKMAG00000002977 Turquoise killifish MODERN SPECIES 1625 pax1a (ENSNFUG00015022542) foxa2 (ENSNFUG00015022548) PRKD3 (ENSNFUG00015022550) MOCS3 (ENSNFUG00015022562) QPCT (ENSNFUG00015022574) ENSNFUG00015022577 SCAF8 (ENSNFUG00015022586) ENSNFUG00015022597 TIAM2 (ENSNFUG00015022606) tfb1m (ENSNFUG00015022616) CU695076.1 (ENSNFUG00015022618) FILIP1 (ENSNFUG00015022621) TMEM30AA (ENSNFUG00015022624) FNDC5 (ENSNFUG00015022632) #21 ankk1 (ENSNFUG00015022634) olig4 (ENSNFUG00015022642) #22 bsdc1 (ENSNFUG00015022647) #23 marcksl1a (ENSNFUG00015022715) #24 gjb9a (ENSNFUG00015022722) #26 PTP4A2 (ENSNFUG00015022737) #27 ppp1r13ba (ENSNFUG00015022744) #28 SYT14 (ENSNFUG00015022780) #29 ENSNFUG00015022789 #30 ENSNFUG00015022792 GNMT (ENSNFUG00015022798) #31 ENSNFUG00015022802 #32 CD93 (ENSNFUG00015022804) #33 ENSNFUG00015022808 ENSNFUG00015022812 ENSNFUG00015022834 ENSNFUG00015022838 Cyprinodontoidei ANCESTRAL SPECIES 8 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00730000111080.b ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT00940000154664.h.n.c.d ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e Poeciliinae ANCESTRAL SPECIES 8 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT00940000154664.h.n.c.d ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e Poecilia ANCESTRAL SPECIES 10 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT00940000154664.h.n.c.d ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e NAME_6 ANCESTRAL SPECIES 6 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT00940000154664.h.n.c.d ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e Amazon molly MODERN SPECIES 260 FAM167B (ENSPFOG00000024047) #9 zgc:154055 (ENSPFOG00000003373) #10 tdh2 (ENSPFOG00000023926) #11 srrm1 (ENSPFOG00000003551) #12 clic4 (ENSPFOG00000003931) #13 runx3 (ENSPFOG00000003997) #14 syf2 (ENSPFOG00000004116) #15 rsrp1 (ENSPFOG00000004238) #16 mgst3b (ENSPFOG00000004259) #17 rhd (ENSPFOG00000004263) #18 tmem50a (ENSPFOG00000023311) maco1b (ENSPFOG00000004344) #19 ldlrap1b (ENSPFOG00000004490) #20 ENSPFOG00000024042 FNDC5 (ENSPFOG00000004711) #21 olig4 (ENSPFOG00000020418) #22 bsdc1 (ENSPFOG00000004781) #23 marcksl1a (ENSPFOG00000004883) #24 KLHL10 (ENSPFOG00000004888) adi1 (ENSPFOG00000004965) trappc12 (ENSPFOG00000005023) eipr1 (ENSPFOG00000005203) MYT1L (ENSPFOG00000005354) PXDN (ENSPFOG00000005747) CCR6 (ENSPFOG00000006146) ENSPFOG00000006162 rtn4ip1 (ENSPFOG00000006405) qrsl1 (ENSPFOG00000006595) iars2 (ENSPFOG00000007310) rab3gap2 (ENSPFOG00000006855) kcnk5a (ENSPFOG00000008079) Sailfin molly MODERN SPECIES 1664 olig4 (ENSPLAG00000004456) #22 bsdc1 (ENSPLAG00000004449) #23 slx9 (ENSPLAG00000004422) ENSPLAG00000004414 ENSPLAG00000004394 ENSPLAG00000004376 ENSPLAG00000004274 Guppy MODERN SPECIES 453 FAM167B (ENSPREG00000002543) #9 zgc:154055 (ENSPREG00000002553) #10 tdh2 (ENSPREG00000002587) #11 srrm1 (ENSPREG00000002652) #12 clic4 (ENSPREG00000002771) #13 runx3 (ENSPREG00000002999) #14 syf2 (ENSPREG00000003009) #15 rsrp1 (ENSPREG00000003027) #16 mgst3b (ENSPREG00000003033) #17 tmem50a (ENSPREG00000003043) rhd (ENSPREG00000003064) #18 maco1b (ENSPREG00000003116) #19 ldlrap1b (ENSPREG00000003146) #20 ENSPREG00000003172 FNDC5 (ENSPREG00000003183) #21 olig4 (ENSPREG00000003214) #22 bsdc1 (ENSPREG00000003228) #23 marcksl1a (ENSPREG00000003279) #24 KLHL10 (ENSPREG00000003283) adi1 (ENSPREG00000003295) trappc12 (ENSPREG00000003319) eipr1 (ENSPREG00000003357) ENSPREG00000003390 MYT1L (ENSPREG00000003428) PXDN (ENSPREG00000003584) CCR6 (ENSPREG00000003671) ENSPREG00000003695 rtn4ip1 (ENSPREG00000003745) qrsl1 (ENSPREG00000003779) iars2 (ENSPREG00000003827) rab3gap2 (ENSPREG00000003942) Platyfish MODERN SPECIES 10 FAM167B (ENSXMAG00000023076) #9 zgc:154055 (ENSXMAG00000018906) #10 tdh2 (ENSXMAG00000018894) #11 srrm1 (ENSXMAG00000018863) #12 clic4 (ENSXMAG00000018849) #13 runx3 (ENSXMAG00000027409) #14 syf2 (ENSXMAG00000022698) #15 rsrp1 (ENSXMAG00000007659) #16 mgst3b (ENSXMAG00000026240) #17 tmem50a (ENSXMAG00000023433) rhd (ENSXMAG00000018815) #18 maco1b (ENSXMAG00000018786) #19 ldlrap1b (ENSXMAG00000018761) #20 ENSXMAG00000024663 FNDC5 (ENSXMAG00000018754) #21 olig4 (ENSXMAG00000024561) #22 bsdc1 (ENSXMAG00000018748) #23 marcksl1a (ENSXMAG00000029740) #24 KLHL10 (ENSXMAG00000018736) adi1 (ENSXMAG00000028792) trappc12 (ENSXMAG00000018716) eipr1 (ENSXMAG00000018706) MYT1L (ENSXMAG00000028196) PXDN (ENSXMAG00000018691) ENSXMAG00000021991 CCR6 (ENSXMAG00000024409) ENSXMAG00000024056 rtn4ip1 (ENSXMAG00000018666) qrsl1 (ENSXMAG00000018661) iars2 (ENSXMAG00000018636) rab3gap2 (ENSXMAG00000018616) NAME_4 ANCESTRAL SPECIES 56 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00730000111080.b ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT00940000154664.h.n.c.d ENSGT00390000008195 ENSGT00390000002448 ENSGT00730000111137 ENSGT00940000155671.y.a ENSGT00940000157666 ENSGT01030000234667.b.f.b ENSGT00940000155695.i.b.b ENSGT00880000138028.b.b ENSGT00550000074866 ENSGT00550000074910 ENSGT00390000005794 ENSGT00940000156775.e Mummichog MODERN SPECIES 2192 FAM167B (ENSFHEG00000007406) #9 zgc:154055 (ENSFHEG00000007402) #10 tdh2 (ENSFHEG00000007389) #11 ENSFHEG00000007359 clic4 (ENSFHEG00000007302) #13 runx3 (ENSFHEG00000007272) #14 syf2 (ENSFHEG00000007238) #15 rsrp1 (ENSFHEG00000007022) #16 mgst3b (ENSFHEG00000007006) #17 tmem50a (ENSFHEG00000007004) rhd (ENSFHEG00000006989) #18 maco1b (ENSFHEG00000006949) #19 ldlrap1b (ENSFHEG00000006904) #20 ENSFHEG00000006873 FNDC5 (ENSFHEG00000006855) #21 olig4 (ENSFHEG00000006813) #22 bsdc1 (ENSFHEG00000006800) #23 marcksl1a (ENSFHEG00000006773) #24 ENSFHEG00000006765 adi1 (ENSFHEG00000006756) trappc12 (ENSFHEG00000006715) eipr1 (ENSFHEG00000006618) Sheepshead minnow MODERN SPECIES 342 ENSCVAG00000007701 FNDC5 (ENSCVAG00000007696) #21 olig4 (ENSCVAG00000007664) #22 bsdc1 (ENSCVAG00000007655) #23 marcksl1a (ENSCVAG00000007605) #24 KLHL10 (ENSCVAG00000007602) adi1 (ENSCVAG00000007585) trappc12 (ENSCVAG00000007570) eipr1 (ENSCVAG00000007550) MYT1L (ENSCVAG00000007520) PXDN (ENSCVAG00000007310) ENSCVAG00000007131 CCR6 (ENSCVAG00000007123) ENSCVAG00000007110 rtn4ip1 (ENSCVAG00000007030) qrsl1 (ENSCVAG00000007008) iars2 (ENSCVAG00000006967) rab3gap2 (ENSCVAG00000006866) Oryzias ANCESTRAL SPECIES 3 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00730000111080.b ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845.f #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b.hb ENSGT00950000182957.b.a.b.a.b.ib Oryzias_a ANCESTRAL SPECIES 11 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00730000111080.b ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845.f #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b.hb ENSGT00940000158104 Japanese Medaka HdrR MODERN SPECIES 14 zgc:154055 (ENSORLG00000017503) #10 tdh2 (ENSORLG00000017505) #11 ENSORLG00000017510 clic4 (ENSORLG00000017513) #13 runx3 (ENSORLG00000017515) #14 syf2 (ENSORLG00000028820) #15 rsrp1 (ENSORLG00000017529) #16 ENSORLG00000024423 mgst3b (ENSORLG00000017532) #17 tmem50a (ENSORLG00000029303) rhd (ENSORLG00000017542) #18 maco1b (ENSORLG00000017545) #19 ldlrap1b (ENSORLG00000017549) #20 ENSORLG00000025178 FNDC5 (ENSORLG00000017554) #21 olig4 (ENSORLG00000017556) #22 ENSORLG00000022574 bsdc1 (ENSORLG00000017563) #23 ENSORLG00000030436 marcksl1a (ENSORLG00000024032) #24 gjb9a (ENSORLG00000028503) #26 ptp4a2a (ENSORLG00000017574) #27 ppp1r13ba (ENSORLG00000017583) #28 sdsl (ENSORLG00000026856) SYT14 (ENSORLG00000019113) #29 ENSORLG00000023211 #30 gnmt (ENSORLG00000023048) #31 ENSORLG00000027538 ENSORLG00000025602 #32 ENSORLG00000025263 #33 ENSORLG00000019002 #34 Chinese medaka MODERN SPECIES 1014 ENSOSIG00000007360 lck (ENSOSIG00000007362) #8 FAM167B (ENSOSIG00000007363) #9 zgc:154055 (ENSOSIG00000007366) #10 tdh2 (ENSOSIG00000007368) #11 ENSOSIG00000007369 clic4 (ENSOSIG00000007370) #13 runx3 (ENSOSIG00000007395) #14 syf2 (ENSOSIG00000007420) #15 mgst3b (ENSOSIG00000007422) #17 tmem50a (ENSOSIG00000007424) rhd (ENSOSIG00000007429) #18 maco1b (ENSOSIG00000007432) #19 ldlrap1b (ENSOSIG00000007501) #20 FNDC5 (ENSOSIG00000007504) #21 olig4 (ENSOSIG00000007508) #22 bsdc1 (ENSOSIG00000007510) #23 marcksl1a (ENSOSIG00000007512) #24 gjb9a (ENSOSIG00000007513) #26 ptp4a2a (ENSOSIG00000007516) #27 ppp1r13ba (ENSOSIG00000007520) #28 sdsl (ENSOSIG00000007525) SYT14 (ENSOSIG00000007531) #29 ENSOSIG00000007536 #30 ENSOSIG00000007538 #31 GNMT (ENSOSIG00000007540) #31 ENSOSIG00000007542 #32 ENSOSIG00000007545 #33 ENSOSIG00000007548 #34 ENSOSIG00000007551 ##34 ENSOSIG00000007556 Oryzias_b ANCESTRAL SPECIES 44 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845.f #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b.hb ENSGT00950000182957.b.a.b.a.b.ib Indian medaka MODERN SPECIES 26 ENSOMEG00000004635 hpca (ENSOMEG00000004619) trpm5 (ENSOMEG00000004578) ENSOMEG00000004518 traf6 (ENSOMEG00000004508) ttc17 (ENSOMEG00000004476) hsd17b12b (ENSOMEG00000004391) ENSOMEG00000000101 LRRC4C (ENSOMEG00000004334) apip (ENSOMEG00000004323) slc1a2a (ENSOMEG00000004288) slc35c1 (ENSOMEG00000004263) chst1 (ENSOMEG00000004247) CACNG4 (ENSOMEG00000004240) FNDC5 (ENSOMEG00000004225) #21 olig4 (ENSOMEG00000004214) #22 bsdc1 (ENSOMEG00000004206) #23 marcksl1a (ENSOMEG00000004195) #24 gjb9a (ENSOMEG00000004186) #26 ENSOMEG00000004172 MAPK8IP1 (ENSOMEG00000004148) ENSOMEG00000004105 ENSOMEG00000004083 lrp4 (ENSOMEG00000003967) NELL1 (ENSOMEG00000003767) slc6a5 (ENSOMEG00000003689) prmt3 (ENSOMEG00000003641) htatip2 (ENSOMEG00000003594) ENSOMEG00000003567 dbx1a (ENSOMEG00000003559) NAV2 (ENSOMEG00000003514) Javanese ricefish MODERN SPECIES 1 ENSOJAG00000005869 ENSOJAG00000005853 BBS12 (ENSOJAG00000005841) fgf2 (ENSOJAG00000005830) nudt6 (ENSOJAG00000005819) SPATA5 (ENSOJAG00000005358) ANKRD50 (ENSOJAG00000005310) ENSOJAG00000005305 septin15 (ENSOJAG00000005278) ENSOJAG00000005255 septin6 (ENSOJAG00000005240) ENSOJAG00000005230 pomk (ENSOJAG00000005209) ENSOJAG00000005190 FNDC5 (ENSOJAG00000005183) #21 olig4 (ENSOJAG00000005179) #22 bsdc1 (ENSOJAG00000005105) #23 marcksl1a (ENSOJAG00000005096) #24 gjb9a (ENSOJAG00000005090) #26 ptp4a2a (ENSOJAG00000005077) #27 ppp1r13ba (ENSOJAG00000004944) #28 sdsl (ENSOJAG00000004910) SYT14 (ENSOJAG00000004872) #29 ENSOJAG00000004855 #30 gnmt (ENSOJAG00000004805) #31 ENSOJAG00000004776 #32 ENSOJAG00000004760 #33 ENSOJAG00000004752 #34 ENSOJAG00000004736 ##34 ENSOJAG00000004712 ENSOJAG00000004640 Ovalentaria_B ANCESTRAL SPECIES 18 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00730000111080.b ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Pomacentridae ANCESTRAL SPECIES 32 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981.c ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420.h #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c.j #34 ENSGT00940000160421.i.c.i #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b Pomacentridae_A ANCESTRAL SPECIES 79 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981.c ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420.h #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000167312 #33 ENSGT00940000160421.i.c.j #34 ENSGT00940000160421.i.c.i #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Amphiprion ANCESTRAL SPECIES 99 ENSGT00940000154301.a.a #7 ENSGT00940000159864 #8 ENSGT00940000159693 #9 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981.c ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420.h #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000167312 #33 ENSGT00940000160421.i.c.j #34 ENSGT00940000160421.i.c.i #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b ENSGT00940000158104 Clown anemonefish MODERN SPECIES 2075 olig4 (ENSAOCG00000017670) #22 bsdc1 (ENSAOCG00000017652) #23 marcksl1a (ENSAOCG00000002773) #24 gjb9a (ENSAOCG00000017604) #26 ptp4a2a (ENSAOCG00000017589) #27 ppp1r13ba (ENSAOCG00000017549) #28 sdsl (ENSAOCG00000017450) Orange clownfish MODERN SPECIES 9 FAM167B (ENSAPEG00000019034) #9 zgc:154055 (ENSAPEG00000019014) #10 tdh2 (ENSAPEG00000018982) #11 srrm1 (ENSAPEG00000018964) #12 clic4 (ENSAPEG00000018937) #13 runx3 (ENSAPEG00000018914) #14 syf2 (ENSAPEG00000018858) #15 rsrp1 (ENSAPEG00000018841) #16 mgst3b (ENSAPEG00000018822) #17 rhd (ENSAPEG00000018785) #18 tmem50a (ENSAPEG00000018758) maco1b (ENSAPEG00000018716) #19 ldlrap1b (ENSAPEG00000018709) #20 ENSAPEG00000018683 FNDC5 (ENSAPEG00000018669) #21 olig4 (ENSAPEG00000018656) #22 bsdc1 (ENSAPEG00000018627) #23 marcksl1a (ENSAPEG00000018617) #24 gjb9a (ENSAPEG00000018604) #26 ptp4a2a (ENSAPEG00000018586) #27 ppp1r13ba (ENSAPEG00000018549) #28 sdsl (ENSAPEG00000018486) SYT14 (ENSAPEG00000018464) #29 ENSAPEG00000018452 #30 ENSAPEG00000018441 #33 gnmt (ENSAPEG00000018396) #31 ENSAPEG00000018382 #33 ENSAPEG00000018289 #34 ENSAPEG00000018235 #34 ENSAPEG00000018176 ##34 ENSAPEG00000018139 Spiny chromis MODERN SPECIES 132 lck (ENSAPOG00000001166) #8 FAM167B (ENSAPOG00000001167) #9 zgc:154055 (ENSAPOG00000001168) #10 tdh2 (ENSAPOG00000001169) #11 srrm1 (ENSAPOG00000001170) #12 clic4 (ENSAPOG00000001171) #13 runx3 (ENSAPOG00000001173) #14 syf2 (ENSAPOG00000001174) #15 rsrp1 (ENSAPOG00000001175) #16 mgst3b (ENSAPOG00000001177) #17 tmem50a (ENSAPOG00000001179) rhd (ENSAPOG00000000004) #18 maco1b (ENSAPOG00000001183) #19 ldlrap1b (ENSAPOG00000001186) #20 FNDC5 (ENSAPOG00000001190) #21 olig4 (ENSAPOG00000001191) #22 bsdc1 (ENSAPOG00000001195) #23 Bicolor damselfish MODERN SPECIES 1114 olig4 (ENSSPAG00000019814) #22 ENSSPAG00000019803 bsdc1 (ENSSPAG00000019796) #23 marcksl1a (ENSSPAG00000019776) #24 gjb9a (ENSSPAG00000019752) #26 ptp4a2a (ENSSPAG00000019739) #27 ppp1r13ba (ENSSPAG00000019707) #28 sdsl (ENSSPAG00000019694) Cichlidae ANCESTRAL SPECIES 23 ENSGT00940000163547 #10 ENSGT00940000166051 #11 ENSGT00730000111080.b ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981 ENSGT00390000004923.A.c.b #21 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c.l #34 ENSGT00940000160421.i.c.k #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b Pseudocrenilabrinae ANCESTRAL SPECIES 8 ENSGT00730000111080.b ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981.b ENSGT00730000113981.a ENSGT00390000004923.A.c.b #21 ENSGT00940000158686 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c.l #34 ENSGT00940000160421.i.c.k #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 6 ENSGT00730000111080.b ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715 ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981.b ENSGT00730000113981.a ENSGT00390000004923.A.c.b #21 ENSGT00940000158686 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c.l #34 ENSGT00940000160421.i.c.k #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b Haplochromini ANCESTRAL SPECIES 7 ENSGT00730000111080.b ENSGT00940000165733 #12 ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715.f ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981.b ENSGT00730000113981.a ENSGT00390000004923.A.c.b #21 ENSGT00940000158686 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c.l.a.a #34 ENSGT00940000160421.i.c.k #34 ENSGT00940000160421.i.d ##34 ENSGT00950000182957.b.a.b.a.b Haplochromini_A ANCESTRAL SPECIES 7 ENSGT00940000166051 #11 ENSGT00730000111080.b ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715.f ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981.b ENSGT00730000113981.a ENSGT00390000004923.A.c.b #21 ENSGT00940000158686 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c.l.b #34 ENSGT00940000160421.i.c.l.a.a.a #34 ENSGT00940000160421.i.c.k #34 ENSGT00940000160421.i.d ##34 P. nyererei MODERN SPECIES 383 lck (ENSPNYG00000005252) #8 FAM167B (ENSPNYG00000005162) #9 zgc:154055 (ENSPNYG00000005136) #10 tdh2 (ENSPNYG00000005096) #11 ENSPNYG00000005058 clic4 (ENSPNYG00000005035) #13 runx3 (ENSPNYG00000005007) #14 syf2 (ENSPNYG00000004979) #15 rsrp1 (ENSPNYG00000004959) #16 mgst3b (ENSPNYG00000004945) #17 TMEM50A (ENSPNYG00000004626) rhd (ENSPNYG00000004554) #18 maco1b (ENSPNYG00000004542) #19 ldlrap1b (ENSPNYG00000004529) #20 FNDC5 (ENSPNYG00000004490) #21 olig4 (ENSPNYG00000004472) #22 bsdc1 (ENSPNYG00000004433) #23 marcksl1a (ENSPNYG00000004425) #24 gjb9a (ENSPNYG00000004418) #26 ptp4a2a (ENSPNYG00000004403) #27 ENSPNYG00000004392 #28 ENSPNYG00000004372 #28 sdsl (ENSPNYG00000004361) SYT14 (ENSPNYG00000004338) #29 ENSPNYG00000004319 #30 gnmt (ENSPNYG00000004219) #31 ENSPNYG00000004190 #32 ENSPNYG00000004168 #33 ENSPNYG00000004062 #34 ENSPNYG00000004034 #34 ENSPNYG00000003899 #34 Haplochromini_B ANCESTRAL SPECIES 37 ENSGT00940000166051 #11 ENSGT00730000111080.b ENSGT00940000155017 #13 ENSGT00940000156598.c.b #14 ENSGT00390000017845 #15 ENSGT00730000112145 #16 ENSGT00940000165706 #17 ENSGT00940000157715.f ENSGT00950000182844.a.b #18 ENSGT00390000016613.c.e.a #19 ENSGT00940000157118.c.a #20 ENSGT00730000113981.b ENSGT00730000113981.a ENSGT00390000004923.A.c.b #21 ENSGT00940000158686 ENSGT00940000166262 #22 ENSGT00390000009361 #23 ENSGT00940000165880.b #24 ENSGT01030000234513.A.a.a.a.b.d.b #26 ENSGT00940000154383.b #27 ENSGT00940000153463.a.c.a #28 ENSGT00940000160713 ENSGT00940000159420 #29 ENSGT00530000063876.a #30 ENSGT00390000006845 #31 ENSGT00940000174492 #32 ENSGT00940000167312 #33 ENSGT00940000160421.i.c.l.b #34 ENSGT00940000160421.i.c.l.a.a.a #34 ENSGT00940000160421.i.c.k #34 ENSGT00940000160421.i.d ##34 Zebra mbuna MODERN SPECIES 1101 tdh2 (ENSMZEG00005006315) #11 ENSMZEG00005006344 clic4 (ENSMZEG00005006374) #13 runx3 (ENSMZEG00005006397) #14 syf2 (ENSMZEG00005006429) #15 rsrp1 (ENSMZEG00005006460) #16 mgst3b (ENSMZEG00005006473) #17 tmem50a (ENSMZEG00005006487) rhd (ENSMZEG00005006508) #18 maco1b (ENSMZEG00005006525) #19 ldlrap1b (ENSMZEG00005006558) #20 ENSMZEG00005006576 ENSMZEG00005006593 FNDC5 (ENSMZEG00005006601) #21 ENSMZEG00005006630 olig4 (ENSMZEG00005006739) #22 bsdc1 (ENSMZEG00005006747) #23 ENSMZEG00005006781 ENSMZEG00005006796 ENSMZEG00005006810 #34 ENSMZEG00005006865 ENSMZEG00005006875 #33 ENSMZEG00005006897 #32 gnmt (ENSMZEG00005006910) #31 ENSMZEG00005006935 #30 SYT14 (ENSMZEG00005006943) #29 sdsl (ENSMZEG00005006960) ppp1r13ba (ENSMZEG00005006993) #28 ptp4a2a (ENSMZEG00005007091) #27 gjb9a (ENSMZEG00005007108) #26 marcksl1a (ENSMZEG00005007115) #24 Eastern happy MODERN SPECIES 10 tdh2 (ENSACLG00000019747) #11 ENSACLG00000019786 clic4 (ENSACLG00000019820) #13 runx3 (ENSACLG00000019835) #14 syf2 (ENSACLG00000019916) #15 rsrp1 (ENSACLG00000019962) #16 mgst3b (ENSACLG00000019979) #17 tmem50a (ENSACLG00000019995) rhd (ENSACLG00000020023) #18 maco1b (ENSACLG00000020042) #19 ldlrap1b (ENSACLG00000020096) #20 ENSACLG00000020118 ENSACLG00000020130 FNDC5 (ENSACLG00000020153) #21 ENSACLG00000020176 olig4 (ENSACLG00000020327) #22 bsdc1 (ENSACLG00000020348) #23 marcksl1a (ENSACLG00000020392) #24 gjb9a (ENSACLG00000020396) #26 ptp4a2a (ENSACLG00000020408) #27 ppp1r13ba (ENSACLG00000020433) #28 sdsl (ENSACLG00000020536) SYT14 (ENSACLG00000020566) #29 ENSACLG00000020582 #30 gnmt (ENSACLG00000020588) #31 ENSACLG00000020613 #33 ENSACLG00000020632 #32 ENSACLG00000020645 #34 ENSACLG00000020723 #34 ENSACLG00000020801 ##34 ENSACLG00000020849 Burton s mouthbrooder MODERN SPECIES 317 tdh2 (ENSHBUG00000020348) #11 ENSHBUG00000020354 srrm1 (ENSHBUG00000020364) #12 clic4 (ENSHBUG00000020400) #13 runx3 (ENSHBUG00000020440) #14 syf2 (ENSHBUG00000020477) #15 rsrp1 (ENSHBUG00000020488) #16 mgst3b (ENSHBUG00000020497) #17 tmem50a (ENSHBUG00000020516) rhd (ENSHBUG00000020540) #18 maco1b (ENSHBUG00000020587) #19 ldlrap1b (ENSHBUG00000020615) #20 ENSHBUG00000020640 ENSHBUG00000020649 FNDC5 (ENSHBUG00000020663) #21 olig4 (ENSHBUG00000000902) #22 bsdc1 (ENSHBUG00000020704) #23 marcksl1a (ENSHBUG00000020710) #24 gjb9a (ENSHBUG00000020725) #26 ptp4a2a (ENSHBUG00000020741) #27 ENSHBUG00000020747 #28 ppp1r13ba (ENSHBUG00000020780) #28 sdsl (ENSHBUG00000020792) SYT14 (ENSHBUG00000020823) #29 ENSHBUG00000020831 #30 gnmt (ENSHBUG00000020847) #31 ENSHBUG00000020856 #32 ENSHBUG00000020873 #33 ENSHBUG00000020974 #34 ENSHBUG00000021067 #34 ENSHBUG00000021133 #34 Lyretail cichlid MODERN SPECIES 481 syf2 (ENSNBRG00000010720) #15 ENSNBRG00000010685 mgst3b (ENSNBRG00000010677) #17 tmem50a (ENSNBRG00000010654) rhd (ENSNBRG00000010444) #18 maco1b (ENSNBRG00000010390) #19 ldlrap1b (ENSNBRG00000010235) #20 FNDC5 (ENSNBRG00000010200) #21 olig4 (ENSNBRG00000010192) #22 bsdc1 (ENSNBRG00000010169) #23 marcksl1a (ENSNBRG00000010164) #24 gjb9a (ENSNBRG00000010132) #26 ptp4a2a (ENSNBRG00000010118) #27 ENSNBRG00000010115 #28 ENSNBRG00000010103 #28 sdsl (ENSNBRG00000010093) SYT14 (ENSNBRG00000010076) #29 ENSNBRG00000010069 #30 gnmt (ENSNBRG00000010043) #31 ENSNBRG00000010022 #33 ENSNBRG00000009992 #34 ENSNBRG00000009913 #34 ENSNBRG00000009865 ##34 ENSNBRG00000009830 Nile tilapia MODERN SPECIES 10 srrm1 (ENSONIG00000008206) #12 clic4 (ENSONIG00000008208) #13 runx3 (ENSONIG00000008210) #14 syf2 (ENSONIG00000008213) #15 ENSONIG00000008215 ENSONIG00000034288 mgst3b (ENSONIG00000008216) #17 tmem50a (ENSONIG00000008217) rhd (ENSONIG00000008219) #18 maco1b (ENSONIG00000008222) #19 ldlrap1b (ENSONIG00000008227) #20 ENSONIG00000038255 ENSONIG00000034845 FNDC5 (ENSONIG00000008229) #21 ENSONIG00000008230 olig4 (ENSONIG00000008239) #22 bsdc1 (ENSONIG00000008240) #23 marcksl1a (ENSONIG00000036121) #24 gjb9a (ENSONIG00000008247) #26 ptp4a2a (ENSONIG00000027166) #27 ppp1r13ba (ENSONIG00000008251) #28 sdsl (ENSONIG00000008258) SYT14 (ENSONIG00000008262) #29 ENSONIG00000035312 #30 gnmt (ENSONIG00000008264) #31 ENSONIG00000039998 #32 ENSONIG00000008266 #33 ENSONIG00000034793 #34 ENSONIG00000034252 #34 ENSONIG00000033326 #34 ENSONIG00000027569 ##34 Midas cichlid MODERN SPECIES 1020 FAM167B (ENSACIG00000023377) #9 zgc:154055 (ENSACIG00000023380) #10 tdh2 (ENSACIG00000023390) #11 ENSACIG00000023398 clic4 (ENSACIG00000023438) #13 runx3 (ENSACIG00000023683) #14 syf2 (ENSACIG00000023688) #15 ENSACIG00000023692 mgst3b (ENSACIG00000023697) #17 tmem50a (ENSACIG00000023700) rhd (ENSACIG00000023704) #18 maco1b (ENSACIG00000023707) #19 ldlrap1b (ENSACIG00000023714) #20 ENSACIG00000023724 FNDC5 (ENSACIG00000023735) #21 olig4 (ENSACIG00000023738) #22 bsdc1 (ENSACIG00000023741) #23 marcksl1a (ENSACIG00000023744) #24 gjb9a (ENSACIG00000023748) #26 ptp4a2a (ENSACIG00000023751) #27 ppp1r13ba (ENSACIG00000023754) #28 ENSACIG00000023758 #28 sdsl (ENSACIG00000023761) SYT14 (ENSACIG00000023766) #29 ENSACIG00000023768 #30 ENSACIG00000023774 krr1 (ENSACIG00000023780) ENSACIG00000023786 NXPE3 (ENSACIG00000023787) Tiger tail seahorse MODERN SPECIES 41 tmem50a (ENSHCOG00000001671) rhd (ENSHCOG00000001660) #18 maco1b (ENSHCOG00000001648) #19 ldlrap1b (ENSHCOG00000001632) #20 ENSHCOG00000001624 FNDC5 (ENSHCOG00000001619) #21 olig4 (ENSHCOG00000001616) #22 bsdc1 (ENSHCOG00000001609) #23 marcksl1a (ENSHCOG00000001603) #24 adi1 (ENSHCOG00000001597) trappc12 (ENSHCOG00000001588) eipr1 (ENSHCOG00000001571) MYT1L (ENSHCOG00000001558) ENSHCOG00000001549 PXDN (ENSHCOG00000001537) CCR6 (ENSHCOG00000001506) ENSHCOG00000001498 rtn4ip1 (ENSHCOG00000001489) qrsl1 (ENSHCOG00000001475) iars2 (ENSHCOG00000001452) rab3gap2 (ENSHCOG00000001385) kcnk5a (ENSHCOG00000001328)