Vertebrata ANCESTRAL SPECIES ENSGT00910000144630.a #22 Gnathostomata ANCESTRAL SPECIES 1043 ENSGT00910000144630.a #22 ENSGT00950000183156.a.b.b.b.b.a #23 ENSGT00390000005809 #25 Euteleostomi ANCESTRAL SPECIES 789 ENSGT00910000144630.a #22 ENSGT00950000183156.a.b.b.b.b.a #23 ENSGT00390000005809 #25 ENSGT00390000017802 #21 Sarcopterygii DUPLICATION Sarcopterygii ANCESTRAL SPECIES 639 ENSGT00910000144630.a.f #22 ENSGT00950000183156.a.b.b.b.b.a #23 ENSGT00390000005809 #25 ENSGT00960000187692 Tetrapoda ANCESTRAL SPECIES 1 ENSGT00940000158506 ENSGT00940000159760 ENSGT00530000064699 ENSGT00940000159042 ENSGT00390000002143.a ENSGT00940000158742 ENSGT00940000158547 ENSGT00940000165526 ENSGT00390000015159.b #37 ENSGT00940000155285.b #33 ENSGT00940000159198 #31 ENSGT00950000182986.a.b.b #30 ENSGT00390000013961 #29 ENSGT00390000011137 #28 ENSGT00390000011759 ENSGT00910000144630.a.f #22 ENSGT00950000183156.a.b.b.b.b.a #23 ENSGT00390000005809 #25 ENSGT00940000156272 #26 ENSGT00940000158932 #27 ENSGT00390000017802 #21 ENSGT00940000159069 #20 ENSGT00390000009543 #19 ENSGT00940000159797 #18 ENSGT00940000157647 #17 ENSGT00390000004915.a #16 ENSGT00390000014398 #15 ENSGT00550000074694.a ENSGT00950000182893.a.a.a.a #12 ENSGT00390000011435 ENSGT00940000160768 #11 Anura ANCESTRAL SPECIES 10 ENSGT00940000159300 ENSGT00940000156215 ENSGT00940000158506 ENSGT00940000159760 ENSGT00530000064699 ENSGT00940000159042 ENSGT00390000002143.a ENSGT00940000158742 ENSGT00940000158547 ENSGT00940000165526 ENSGT00940000159198 #31 ENSGT00950000182986.a.b.b #30 ENSGT00390000013961 #29 ENSGT00390000011137 #28 ENSGT00390000011759 ENSGT00910000144630.a.f #22 ENSGT00950000183156.a.b.b.b.b.a #23 ENSGT00390000005809 #25 ENSGT00940000156272 #26 ENSGT00940000158932 #27 ENSGT00390000017802 #21 ENSGT00940000159069 #20 ENSGT00390000009543 #19 ENSGT00940000159797 #18 ENSGT00940000157647 #17 ENSGT00390000004915.a #16 ENSGT00390000014398 #15 ENSGT00550000074694.a ENSGT00950000182893.a.a.a.a #12 ENSGT00940000160768 #11 ENSGT00940000153859.b #10 Frog MODERN SPECIES 6 has2 (ENSXETG00000006863) #7 zhx2 (ENSXETG00000048272) #8 derl1 (ENSXETG00000023186) #9 tbc1d31 (ENSXETG00000023189) #10 fam83a (ENSXETG00000023191) #11 zhx1 (ENSXETG00000023192) #12 ENSXETG00000049483 #13 atad2 (ENSXETG00000023215) #14 ntaq1 (ENSXETG00000041404) #15 fbxo32 (ENSXETG00000023228) #16 klhl38 (ENSXETG00000023230) #17 anxa13 (ENSXETG00000023236) #18 fam91a1 (ENSXETG00000023243) #19 fer1l6 (ENSXETG00000023247) #20 tmem65 (ENSXETG00000049163) #21 cat2 (ENSXETG00000017451) #22 mtss1.1 (ENSXETG00000017462) #23 ENSXETG00000049126 #24 ndufb9 (ENSXETG00000030956) #25 tatdn1 (ENSXETG00000017477) #26 rnf139 (ENSXETG00000017487) #27 washc5 (ENSXETG00000017490) #28 nsmce2 (ENSXETG00000037257) #29 mcm7 (ENSXETG00000017499) #30 lratd2 (ENSXETG00000046349) #31 ENSXETG00000046371 #32 myc (ENSXETG00000025372) #33 ENSXETG00000043453 #34 ENSXETG00000041686 #35 ENSXETG00000046807 #36 cyrib (ENSXETG00000017755) #37 Leishan spiny toad MODERN SPECIES 8 ENSLLEG00000005478 ENSLLEG00000005461 ENSLLEG00000005446 MYC (ENSLLEG00000005334) #33 ENSLLEG00000005295 ENSLLEG00000005283 ENSLLEG00000016321 ENSLLEG00000016299 LRATD2 (ENSLLEG00000016277) #31 ENSLLEG00000016251 TRIB1 (ENSLLEG00000016209) #30 NSMCE2 (ENSLLEG00000016144) #29 WASHC5 (ENSLLEG00000014791) #28 SQLE (ENSLLEG00000014639) ENSLLEG00000014608 ENSLLEG00000014142 #22 MTSS1 (ENSLLEG00000013998) #23 NDUFB9 (ENSLLEG00000013944) #25 TATDN1 (ENSLLEG00000013747) #26 RNF139 (ENSLLEG00000013689) #27 ENSLLEG00000013666 TMEM65 (ENSLLEG00000013572) #21 ENSLLEG00000013477 #20 ENSLLEG00000013368 #20 ENSLLEG00000013337 ANXA13 (ENSLLEG00000013215) #18 KLHL38 (ENSLLEG00000013181) #17 FBXO32 (ENSLLEG00000013128) #16 NTAQ1 (ENSLLEG00000013066) #15 ATAD2 (ENSLLEG00000012369) ZHX1 (ENSLLEG00000012308) #12 Coelacanth MODERN SPECIES 1691 ENSLACG00000010826 ENSLACG00000010458 ENSLACG00000008642 #22 MTSS1 (ENSLACG00000003401) #23 NDUFB9 (ENSLACG00000002922) #25 RNF139 (ENSLACG00000000423) #27 Sarcopterygii ANCESTRAL SPECIES ENSGT00910000144630.a.e ##22 Coelacanth MODERN SPECIES 2151 PAQR8 (ENSLACG00000009123) MCM3 (ENSLACG00000007689) ENSLACG00000007297 IL17F (ENSLACG00000007083) RPL7L1 (ENSLACG00000006089) SLC5A6 (ENSLACG00000004585) ENSLACG00000002596 ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00910000144630.a #22 Neopterygii ANCESTRAL SPECIES 3 ENSGT00940000155701.D ENSGT00940000157057 ENSGT00640000091563.a ENSGT00940000159956 ENSGT00510000046988 ENSGT00530000064569.b ENSGT00530000064569.a ENSGT00390000018525.a.a ENSGT00390000002164.a ENSGT00940000157912 ENSGT00420000030417 ENSGT00940000156543 ENSGT00390000009877 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303 ENSGT00940000162058 ENSGT00940000159766 ENSGT00390000001205.a ENSGT00940000158434 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00940000159658.a ENSGT01030000234573.B.c.b.a ENSGT00990000203619.A.b.b.b.a ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 Osteoglossocephalai ANCESTRAL SPECIES 470 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e Clupeocephala ANCESTRAL SPECIES 89 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000001216 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00390000008403 ENSGT01030000234576.D.a.a.b.b ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00390000001205.a ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00940000159658.a ENSGT01030000234573.B.c.b.a ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 Otomorpha ANCESTRAL SPECIES 32 ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000001216 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00390000001094 ENSGT01030000234576.D.a.a.b.b ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00390000001205.a ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e.k ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 ENSGT00940000167711.b Otophysi ANCESTRAL SPECIES ENSGT00940000168290.c ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000001216 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00390000001094 ENSGT00730000112471 ENSGT01030000234576.D.a.a.b.b ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00390000001205.a ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e.k ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 ENSGT00940000167711.a.a ENSGT00940000164251.c Characiphysae ANCESTRAL SPECIES 92 ENSGT00940000153954 ENSGT00940000168290.c ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000001216 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00390000001094 ENSGT00730000112471 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00390000001205.a ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e.k.b ENSGT00990000203619.A.b.b.b.a.e.k.a ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00940000164218.pb Characiphysae_b ANCESTRAL SPECIES 91 ENSGT00940000153954 ENSGT00940000168290.c ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000001216 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00390000001094 ENSGT00730000112471 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00390000001205.a ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e.k.b ENSGT00990000203619.A.b.b.b.a.e.k.a ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00940000164218.pb Characoidei ANCESTRAL SPECIES 85 ENSGT00940000153954 ENSGT00940000168290.c ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000001216 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00390000001094 ENSGT00730000112471 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00390000001205.a ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e.k.b ENSGT00990000203619.A.b.b.b.a.e.k.a ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 Red-bellied piranha MODERN SPECIES 15 ENSPNAG00000012423 ENSPNAG00000012550 ppp2r5d (ENSPNAG00000012632) mea1 (ENSPNAG00000012647) dnph1 (ENSPNAG00000012654) DLK2 (ENSPNAG00000012670) ENSPNAG00000012692 LRRC73 (ENSPNAG00000012721) yipf3 (ENSPNAG00000012759) ncoa4 (ENSPNAG00000012778) ENSPNAG00000012795 ENSPNAG00000006947 QKI (ENSPNAG00000002418) ENSPNAG00000012835 prkn (ENSPNAG00000002443) ENSPNAG00000002457 #22 UBR2 (ENSPNAG00000013002) prph2b (ENSPNAG00000013015) pkdcca (ENSPNAG00000002522) EML4 (ENSPNAG00000013082) ENSPNAG00000013111 COX7A2L (ENSPNAG00000002563) KCNG3 (ENSPNAG00000004758) ENSPNAG00000002572 OXER1 (ENSPNAG00000002574) OXER1 (ENSPNAG00000013161) ENSPNAG00000002586 haao (ENSPNAG00000002590) ZFP36L2 (ENSPNAG00000013174) THADA (ENSPNAG00000013217) PLEKHH2 (ENSPNAG00000013260) Mexicana tetra MODERN SPECIES 17 mrps6 (ENSAMXG00000026285) ENSAMXG00000044073 ENSAMXG00000043989 ppp2r5d (ENSAMXG00000015584) mea1 (ENSAMXG00000015611) dnph1 (ENSAMXG00000015630) DLK2 (ENSAMXG00000043523) ENSAMXG00000015682 LRRC73 (ENSAMXG00000015706) yipf3 (ENSAMXG00000038727) ncoa4 (ENSAMXG00000015735) ENSAMXG00000041757 QKI (ENSAMXG00000015808) ENSAMXG00000031914 prkn (ENSAMXG00000015822) ENSAMXG00000015836 #22 UBR2 (ENSAMXG00000015852) prph2b (ENSAMXG00000035606) pkdcca (ENSAMXG00000038060) ENSAMXG00000044011 EML4 (ENSAMXG00000005023) ENSAMXG00000043124 COX7A2L (ENSAMXG00000029555) KCNG3 (ENSAMXG00000015014) OXER1 (ENSAMXG00000015045) OXER1 (ENSAMXG00000026287) OXER1 (ENSAMXG00000026288) OXER1 (ENSAMXG00000026289) ENSAMXG00000042390 haao (ENSAMXG00000038860) ENSAMXG00000035828 Channel catfish MODERN SPECIES 22 ENSIPUG00000012933 ENSIPUG00000012911 ppp2r5d (ENSIPUG00000012800) MEA1 (ENSIPUG00000012786) dnph1 (ENSIPUG00000012781) dnph1 (ENSIPUG00000012772) dlk2 (ENSIPUG00000012767) ENSIPUG00000012745 lrrc73 (ENSIPUG00000012719) yipf3 (ENSIPUG00000012701) ncoa4 (ENSIPUG00000012683) ENSIPUG00000012658 ENSIPUG00000012656 qki (ENSIPUG00000012637) prkn (ENSIPUG00000010969) ENSIPUG00000010942 #22 UBR2 (ENSIPUG00000010872) prph2b (ENSIPUG00000010856) PKDCC (ENSIPUG00000010826) ENSIPUG00000010820 eml4 (ENSIPUG00000010577) ENSIPUG00000010529 COX7R (ENSIPUG00000010503) kcng3 (ENSIPUG00000010483) Hcar2 (ENSIPUG00000010473) ENSIPUG00000010466 haao (ENSIPUG00000010362) ZFP36L2 (ENSIPUG00000010345) thada (ENSIPUG00000010261) PLEKHH2 (ENSIPUG00000010188) epcam (ENSIPUG00000010141) Cyprinoidei ANCESTRAL SPECIES 5 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290.c ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000001216 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00390000008403 ENSGT01030000234576.D.a.a.b.b ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00390000001205.a ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e.k ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 ENSGT00940000167711.a.a.b Cyprininae ANCESTRAL SPECIES 175 ENSGT00940000153954.p.b ENSGT00940000160203.d ENSGT00940000154457.b ENSGT00390000016950.mb.a ENSGT00390000000614.b ENSGT01030000234620.a.a.a.b.r ENSGT00390000016927.a ENSGT00390000001216 ENSGT00940000160761.g ENSGT00940000164045.b ENSGT00390000003256 ENSGT00940000153766.A.d ENSGT00390000008403.b ENSGT01030000234576.D.a.a.b.b ENSGT00940000155310.a.b.b ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a.t ENSGT00940000157303.e.b ENSGT00390000001205.a.a ENSGT00940000158434.a ENSGT00390000003039.a ENSGT00970000193390.c.b.b.b.a.db ENSGT00940000154815.b.b.g ENSGT00940000159658.b.b.b ENSGT00990000203619.A.b.b.b.a.e.k.c ENSGT00390000010899.a.b.b.a.c ENSGT00940000161584.k.a ENSGT00940000157675.b ENSGT00390000018245.u ENSGT00940000167711.b ENSGT00940000164251.c Goldfish MODERN SPECIES 4 ENSCARG00000010256 ENSCARG00000010248 ppp2r5d (ENSCARG00000009835) mea1 (ENSCARG00000009803) ENSCARG00000009802 DLK2 (ENSCARG00000009800) ENSCARG00000009797 ENSCARG00000009795 LRRC73 (ENSCARG00000009783) YIPF3 (ENSCARG00000009765) ncoa4 (ENSCARG00000009756) ENSCARG00000009754 QKI (ENSCARG00000009745) ENSCARG00000009740 ENSCARG00000009737 ENSCARG00000009731 #22 UBR2 (ENSCARG00000007195) prph2b (ENSCARG00000007020) ENSCARG00000007009 pkdcca (ENSCARG00000006984) EML4 (ENSCARG00000006561) ENSCARG00000006497 ENSCARG00000006488 COX7A2L (ENSCARG00000006474) KCNG3 (ENSCARG00000006467) OXER1 (ENSCARG00000006463) ENSCARG00000006450 haao (ENSCARG00000006199) ZFP36L2 (ENSCARG00000006176) PLEKHH2 (ENSCARG00000005512) epcam (ENSCARG00000005467) Cyprininae_a ANCESTRAL SPECIES 216 ENSGT00940000153954.p.a ENSGT00940000164832.e.b ENSGT00390000016950.mb.b ENSGT00940000168290.c ENSGT00390000000614.a ENSGT01030000234620.a.a.a.b.q ENSGT00390000016927.b ENSGT00940000160761.h ENSGT00940000164045.a ENSGT00390000003256.l ENSGT00940000153766.A.d ENSGT00390000008403.b ENSGT01030000234576.D.a.a.b.b ENSGT00940000155310.a.b.b ENSGT00390000011034.kd ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a.t ENSGT00940000157303.e.b ENSGT00390000001205.a.a ENSGT00940000158434.a ENSGT00390000003039.a ENSGT00970000193390.c.b.b.b.a.db ENSGT00940000154815.b.b.g ENSGT00940000159658.b.b.b ENSGT00990000203619.A.b.b.b.a.e.k.c ENSGT00390000010899.a.b.b.a.c ENSGT00390000013008.a ENSGT00940000161584.k.a ENSGT00940000157675.b ENSGT00940000164251.d ENSGT00950000182980.a.b.b.b.gc.a Common carp reference MODERN SPECIES 18 ppp2r5d (ENSCCRG00000013598) mea1 (ENSCCRG00000032060) DLK2 (ENSCCRG00000075423) ENSCCRG00000025346 ENSCCRG00000025345 yipf3 (ENSCCRG00000014201) ncoa4 (ENSCCRG00000025315) ENSCCRG00000043120 ENSCCRG00000072209 ENSCCRG00000060502 ENSCCRG00000058357 ENSCCRG00000074474 ENSCCRG00000054522 ENSCCRG00000053169 prkn (ENSCCRG00000034834) ENSCCRG00000079610 #22 ENSCCRG00000027386 ENSCCRG00000078898 prph2b (ENSCCRG00000066421) pkdcca (ENSCCRG00000053568) ENSCCRG00000072223 ENSCCRG00000066976 ENSCCRG00000021095 ENSCCRG00000060988 KCNG3 (ENSCCRG00000012357) ENSCCRG00000067207 ENSCCRG00000066788 OXER1 (ENSCCRG00000045347) ENSCCRG00000045350 haao (ENSCCRG00000070664) ZFP36L2 (ENSCCRG00000082716) Golden-line barbel MODERN SPECIES 122 prkn (ENSSGRG00000054542) ENSSGRG00000054576 #22 UBR2 (ENSSGRG00000054594) prph2b (ENSSGRG00000054666) pkdcca (ENSSGRG00000054667) EML4 (ENSSGRG00000054671) ENSSGRG00000054725 COX7A2L (ENSSGRG00000054726) KCNG3 (ENSSGRG00000054728) OXER1 (ENSSGRG00000054729) ENSSGRG00000054730 haao (ENSSGRG00000054731) ENSSGRG00000054736 PLEKHH2 (ENSSGRG00000054751) epcam (ENSSGRG00000054769) ENSSGRG00000054770 ENSSGRG00000054771 Zebrafish MODERN SPECIES 4 sft2d1 (ENSDARG00000007362) ENSDARG00000089355 ENSDARG00000090054 ppp2r5d (ENSDARG00000014428) mea1 (ENSDARG00000039820) dnph1 (ENSDARG00000075730) DLK2 (ENSDARG00000076247) ENSDARG00000010681 LRRC73 (ENSDARG00000063411) yipf3 (ENSDARG00000020449) ncoa4 (ENSDARG00000021439) ENSDARG00000100375 ENSDARG00000104860 QKI (ENSDARG00000002026) prkn (ENSDARG00000021555) ENSDARG00000031278 #22 UBR2 (ENSDARG00000070164) prph2b (ENSDARG00000014840) pkdcca (ENSDARG00000035161) EML4 (ENSDARG00000109443) wu:fj16a03 (ENSDARG00000100952) ENSDARG00000112522 XPO5 (ENSDARG00000098868) ENSDARG00000074653 wdr11 (ENSDARG00000075245) PLPP4 (ENSDARG00000098862) lhb (ENSDARG00000099363) cox20 (ENSDARG00000099997) ARFGEF3 (ENSDARG00000077656) fbxo9 (ENSDARG00000011055) elovl5 (ENSDARG00000004979) Clupeiformes ANCESTRAL SPECIES 35 ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000001216 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00390000001094.`b ENSGT00940000172304.a.a ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00390000001205.a ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e.k ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 ENSGT00940000167711.b Atlantic herring MODERN SPECIES 4 ENSCHAG00000009343 PPP2R5D (ENSCHAG00000009221) ENSCHAG00000009156 ppp2r5d (ENSCHAG00000009027) mea1 (ENSCHAG00000009013) dnph1 (ENSCHAG00000009007) DLK2 (ENSCHAG00000008913) ENSCHAG00000008899 LRRC73 (ENSCHAG00000008886) yipf3 (ENSCHAG00000008825) ncoa4 (ENSCHAG00000008809) ENSCHAG00000008781 ENSCHAG00000008773 ENSCHAG00000008756 prkn (ENSCHAG00000008587) ENSCHAG00000008532 #22 UBR2 (ENSCHAG00000004826) prph2b (ENSCHAG00000004787) ENSCHAG00000004778 ENSCHAG00000004687 ENSCHAG00000004594 ENSCHAG00000004549 ENSCHAG00000004535 mtg1 (ENSCHAG00000004441) ENSCHAG00000004418 echs1 (ENSCHAG00000004214) fuom (ENSCHAG00000004036) ENSCHAG00000004015 msx3 (ENSCHAG00000003999) znf511 (ENSCHAG00000003974) adam8a (ENSCHAG00000003896) Euteleosteomorpha ANCESTRAL SPECIES 33 ENSGT00940000153954 ENSGT00940000172797 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000001216 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00390000008403 ENSGT01030000234576.D.a.a.b.b ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00390000001205.a ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000010899.a.b.b.a ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 ENSGT00940000167711.a.a Protacanthopterygii ANCESTRAL SPECIES 39 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000001216 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00390000001094.z ENSGT01030000234576.D.a.a.b.b ENSGT00940000155965.a.b ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00390000001205.a ENSGT00940000158434 ENSGT00390000003039 ENSGT00970000193390.c.b.b.a.m ENSGT00390000010899.a.b.b.a ENSGT00940000154815.b.b ENSGT00940000159658.b.b ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000013008 ENSGT00940000161584 ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000018245 Salmoninae ANCESTRAL SPECIES 61 ENSGT00940000153954.wb ENSGT00940000168290.b ENSGT00390000000614.c ENSGT01030000234620.a.a.a.b.o ENSGT00390000016927.d ENSGT00390000001216 ENSGT00940000160761.b ENSGT00940000164045.f ENSGT00390000003256.d ENSGT00940000153766.A.i ENSGT00390000008403.c ENSGT00390000001094.z ENSGT00940000155965.a.b ENSGT00940000155310.a.b.c.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a.q ENSGT00940000157303.e.h ENSGT00390000001205.a.d ENSGT00940000158434.c ENSGT00940000158434.d.b.a.a ENSGT00390000003039 ENSGT00970000193390.c.b.b.a.m ENSGT00940000154815.b.b.e ENSGT00940000159658.b.b.c ENSGT00990000203619.A.b.b.b.a.e.i ENSGT00390000010899.a.b.b.a ENSGT00390000013008.h ENSGT01030000234535.A.q.b ENSGT00940000161584.m ENSGT00390000015500 Huchen DUPLICATION Huchen MODERN SPECIES 84 SYNDIG1 (ENSHHUG00000034791) ENSHHUG00000034792 ENSHHUG00000034949 ppp2r5d (ENSHHUG00000034977) mea1 (ENSHHUG00000035117) dnph1 (ENSHHUG00000035121) DLK2 (ENSHHUG00000035130) ENSHHUG00000035141 LRRC73 (ENSHHUG00000035148) yipf3 (ENSHHUG00000035164) ncoa4 (ENSHHUG00000035199) ENSHHUG00000035223 ENSHHUG00000035238 QKI (ENSHHUG00000035243) prkn (ENSHHUG00000035262) ENSHHUG00000035307 #22 ENSHHUG00000035310 #22 UBR2 (ENSHHUG00000035325) prph2b (ENSHHUG00000035358) pkdcca (ENSHHUG00000035361) EML4 (ENSHHUG00000035368) Huchen MODERN SPECIES 84 ENSHHUG00000034792 ENSHHUG00000034949 ppp2r5d (ENSHHUG00000034977) mea1 (ENSHHUG00000035117) dnph1 (ENSHHUG00000035121) DLK2 (ENSHHUG00000035130) ENSHHUG00000035141 LRRC73 (ENSHHUG00000035148) yipf3 (ENSHHUG00000035164) ncoa4 (ENSHHUG00000035199) ENSHHUG00000035223 ENSHHUG00000035238 QKI (ENSHHUG00000035243) prkn (ENSHHUG00000035262) ENSHHUG00000035307 #22 ENSHHUG00000035310 #22 UBR2 (ENSHHUG00000035325) prph2b (ENSHHUG00000035358) pkdcca (ENSHHUG00000035361) EML4 (ENSHHUG00000035368) Salmoninae_a ANCESTRAL SPECIES 11 ENSGT00940000153954.wb ENSGT00940000168290.b ENSGT00390000000614.c ENSGT01030000234620.a.a.a.b.o ENSGT00390000016927.d ENSGT00390000001216 ENSGT00940000160761.b ENSGT00940000164045.f ENSGT00390000003256.d ENSGT00940000153766.A.i ENSGT00390000008403.c ENSGT00390000001094.z ENSGT00940000155965.a.b ENSGT00940000155310.a.b.c.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a.q ENSGT00940000157303.e.h ENSGT00390000001205.a.d ENSGT00940000158434.c ENSGT00390000003738.b.d.a.c.b ENSGT00940000158434.d.b.a.a ENSGT00390000003039.e ENSGT00970000193390.c.b.b.b.a.v ENSGT00970000193390.c.b.b.a.l.b.a ENSGT00390000007640.a.i ENSGT00940000158940.a.h ENSGT00430000031071.b ENSGT00940000154479.a.a.b.d.a ENSGT00940000159379.a.a ENSGT00940000154479.a.a.b.d.b Salmo ANCESTRAL SPECIES 29 ENSGT00950000183147.B.e.b ENSGT00940000153954.wb ENSGT00390000000614.c ENSGT01030000234620.a.a.a.b.o ENSGT00390000016927.d ENSGT00390000001216 ENSGT00940000160761.b ENSGT00940000164045.f ENSGT00390000003256.d ENSGT00940000153766.A.i ENSGT00390000008403.c ENSGT00390000001094.z ENSGT00940000155965.a.b ENSGT00940000155310.a.b.c.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a.q ENSGT00940000157303.e.h ENSGT00390000001205.a.d ENSGT00390000003738.b.d.a.c.b ENSGT00940000158434.d.b.a.a ENSGT00390000003039.e ENSGT00940000159658.b.b.c ENSGT00940000154815.b.b.f.a.b ENSGT00990000203619.A.b.b.b.a.e.i ENSGT00390000010899.a.b.b.a ENSGT01030000234535.A.q.b ENSGT00940000161584.m ENSGT00390000015500 ENSGT00940000157675.d ENSGT00390000018245.t River trout MODERN SPECIES 35 SYNDIG1 (ENSSTUG00000009973) ENSSTUG00000010014 ENSSTUG00000010904 ppp2r5d (ENSSTUG00000011009) mea1 (ENSSTUG00000014812) dnph1 (ENSSTUG00000014832) DLK2 (ENSSTUG00000014856) ENSSTUG00000014877 LRRC73 (ENSSTUG00000014884) yipf3 (ENSSTUG00000014906) ncoa4 (ENSSTUG00000015035) ENSSTUG00000015061 ENSSTUG00000015102 QKI (ENSSTUG00000015110) prkn (ENSSTUG00000015138) ENSSTUG00000015199 #22 UBR2 (ENSSTUG00000000249) prph2b (ENSSTUG00000000327) pkdcca (ENSSTUG00000000338) ENSSTUG00000000360 ENSSTUG00000000515 ENSSTUG00000000518 ENSSTUG00000000521 ENSSTUG00000000529 KCNG3 (ENSSTUG00000000532) COX7A2L (ENSSTUG00000000537) OXER1 (ENSSTUG00000000546) ENSSTUG00000000553 ENSSTUG00000000561 st8sia7.1 (ENSSTUG00000000568) zfp36l2 (ENSSTUG00000000573) Atlantic salmon MODERN SPECIES 9 ENSSSAG00000064201 ENSSSAG00000064135 ppp2r5d (ENSSSAG00000104067) mea1 (ENSSSAG00000105859) ENSSSAG00000060738 dnph1 (ENSSSAG00000088880) ENSSSAG00000082235 ENSSSAG00000114068 lrrc73 (ENSSSAG00000060630) yipf3 (ENSSSAG00000060501) ncoa4 (ENSSSAG00000060369) ENSSSAG00000060440 ENSSSAG00000103008 ENSSSAG00000104512 prkn (ENSSSAG00000059829) ENSSSAG00000059761 #22 ENSSSAG00000042694 prph2b (ENSSSAG00000042420) ENSSSAG00000115091 pkdcca (ENSSSAG00000042416) ENSSSAG00000042405 ENSSSAG00000001809 ENSSSAG00000040155 ENSSSAG00000092433 ENSSSAG00000112560 ENSSSAG00000040016 ENSSSAG00000040002 ENSSSAG00000101524 G109A (ENSSSAG00000039943) ENSSSAG00000089174 ENSSSAG00000039893 Oncorhynchus DUPLICATION Oncorhynchus ANCESTRAL SPECIES 2 ENSGT00940000168290.b ENSGT00390000000614.c ENSGT01030000234620.a.a.a.b.o ENSGT00390000016927.d ENSGT00390000001216 ENSGT00940000160761.b ENSGT00940000164045.f ENSGT00390000003256.d ENSGT00940000153766.A.i ENSGT00390000008403.c ENSGT01060000250178 ENSGT00940000155965.a.b ENSGT00940000155310.a.b.c.b ENSGT00390000011034.sc.a.a ENSGT00390000011034.sc.b ENSGT00910000144630.a.c #22 ENSGT00950000183075.a.a.a.a.q ENSGT00940000157303.e.h ENSGT00390000001205.a.d ENSGT00940000158434.c ENSGT00390000003738.b.d.a.c.b ENSGT00940000158434.d.b.a.a ENSGT00390000003039.e ENSGT00940000154815.b.b.e ENSGT00940000159658.b.b.c ENSGT00990000203619.A.b.b.b.a.e.i ENSGT00390000010899.a.b.b.a ENSGT00390000013008.h ENSGT01030000234535.A.q.b ENSGT00940000161584.m ENSGT00390000015500 Rainbow trout MODERN SPECIES ENSOMYG00000034284 ENSOMYG00000075196 ppp2r5d (ENSOMYG00000033264) mea1 (ENSOMYG00000032857) dnph1 (ENSOMYG00000032849) DLK2 (ENSOMYG00000032836) ENSOMYG00000032553 ENSOMYG00000032454 yipf3 (ENSOMYG00000032419) ncoa4 (ENSOMYG00000032388) ENSOMYG00000032351 ENSOMYG00000032332 ENSOMYG00000032319 ENSOMYG00000032282 ENSOMYG00000057207 ENSOMYG00000032251 #22 ENSOMYG00000029138 prph2b (ENSOMYG00000028036) ENSOMYG00000076493 pkdcca (ENSOMYG00000028029) ENSOMYG00000028021 EML4 (ENSOMYG00000027209) wu:fj16a03 (ENSOMYG00000026703) ENSOMYG00000050070 ENSOMYG00000026664 COX7A2L (ENSOMYG00000026655) KCNG3 (ENSOMYG00000026642) OXER1 (ENSOMYG00000012440) ENSOMYG00000026637 HAAO (ENSOMYG00000026593) ENSOMYG00000026580 Oncorhynchus_a ANCESTRAL SPECIES 1 ENSGT00940000153954.wb ENSGT00940000168290.b ENSGT00390000000614.c ENSGT01030000234620.a.a.a.b.o ENSGT00390000016927.d ENSGT00390000001216 ENSGT00940000160761.b ENSGT00940000164045.f ENSGT00390000003256.d ENSGT00940000153766.A.i ENSGT00390000008403.c ENSGT01060000250178 ENSGT00940000155965.a.b ENSGT00940000155310.a.b.c.b ENSGT00390000011034.sc.a.a ENSGT00910000144630.a.c #22 ENSGT00950000183075.a.a.a.a.q ENSGT00940000157303.e.h ENSGT00390000001205.a.d ENSGT00940000158434.c ENSGT00390000003039.e ENSGT00940000154649.A.q ENSGT01000000220187 ENSGT00940000166093.e.a ENSGT00940000158804.g ENSGT00730000112347.b ENSGT00940000158155.e ENSGT00940000155368.g.a.a ENSGT00970000193390.c.b.b.b.a.v ENSGT00970000193390.c.b.b.a.l.b.a ENSGT01030000234583.a.a.c.b.a.a.b.c Chinook salmon MODERN SPECIES 30 ENSOTSG00005031669 ENSOTSG00005031666 ENSOTSG00005031664 ppp2r5d (ENSOTSG00005028181) mea1 (ENSOTSG00005028161) dnph1 (ENSOTSG00005028160) DLK2 (ENSOTSG00005028150) ENSOTSG00005028115 LRRC73 (ENSOTSG00005028111) yipf3 (ENSOTSG00005028110) ncoa4 (ENSOTSG00005028108) ENSOTSG00005028107 ENSOTSG00005028105 QKI (ENSOTSG00005028098) prkn (ENSOTSG00005028093) ENSOTSG00005028091 #22 UBR2 (ENSOTSG00005023403) prph2b (ENSOTSG00005023332) pkdcca (ENSOTSG00005023311) EML4 (ENSOTSG00005020413) ENSOTSG00005020407 ENSOTSG00005020404 ENSOTSG00005020403 COX7A2L (ENSOTSG00005020402) KCNG3 (ENSOTSG00005020401) ENSOTSG00005020399 st8sia7.1 (ENSOTSG00005020398) zfp36l2 (ENSOTSG00005020396) ENSOTSG00005020132 PLEKHH2 (ENSOTSG00005020085) epcam (ENSOTSG00005020058) Coho salmon MODERN SPECIES 24 ENSOKIG00005003399 ENSOKIG00005003279 ENSOKIG00005003258 ppp2r5d (ENSOKIG00005003028) mea1 (ENSOKIG00005002986) dnph1 (ENSOKIG00005002975) DLK2 (ENSOKIG00005002962) ENSOKIG00005002951 LRRC73 (ENSOKIG00005002943) yipf3 (ENSOKIG00005002897) ncoa4 (ENSOKIG00005002858) ENSOKIG00005002837 ENSOKIG00005002833 QKI (ENSOKIG00005002819) prkn (ENSOKIG00005002719) ENSOKIG00005002657 #22 UBR2 (ENSOKIG00005000936) ENSOKIG00005000365 prph2b (ENSOKIG00005000362) pkdcca (ENSOKIG00005000349) ENSOKIG00005000342 EML4 (ENSOKIG00005000244) ENSOKIG00005000101 ENSOKIG00005000087 ENSOKIG00005000078 COX7A2L (ENSOKIG00005000069) KCNG3 (ENSOKIG00005000059) OXER1 (ENSOKIG00005000045) ENSOKIG00005000034 HAAO (ENSOKIG00005000015) st8sia7.1 (ENSOKIG00005012471) Oncorhynchus ANCESTRAL SPECIES ENSGT00910000144630.a.d #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00910000144630.a.d #22 Coho salmon MODERN SPECIES 2 ENSOKIG00005049278 ENSOKIG00005001964 ENSOKIG00005002009 ENSOKIG00005002026 ppp2r5d (ENSOKIG00005002191) mea1 (ENSOKIG00005002530) DLK2 (ENSOKIG00005002543) ENSOKIG00005002559 LRRC73 (ENSOKIG00005002574) yipf3 (ENSOKIG00005002612) ncoa4 (ENSOKIG00005002717) ENSOKIG00005002735 ENSOKIG00005002759 QKI (ENSOKIG00005002772) ENSOKIG00005002790 ENSOKIG00005002803 #22 UBR2 (ENSOKIG00005003086) prph2b (ENSOKIG00005003683) pkdcca (ENSOKIG00005003689) ENSOKIG00005003700 EML4 (ENSOKIG00005003765) ENSOKIG00005004086 ENSOKIG00005004093 COX7A2L (ENSOKIG00005004104) KCNG3 (ENSOKIG00005004108) ENSOKIG00005004113 OXER1 (ENSOKIG00005004115) haao (ENSOKIG00005004125) zfp36l2 (ENSOKIG00005004145) epcam (ENSOKIG00005004156) calm2a (ENSOKIG00005004174) Northern pike MODERN SPECIES 5 CUL7 (ENSELUG00000017179) ENSELUG00000017093 ENSELUG00000017055 ppp2r5d (ENSELUG00000017007) mea1 (ENSELUG00000016957) dnph1 (ENSELUG00000016938) DLK2 (ENSELUG00000016914) ENSELUG00000016871 LRRC73 (ENSELUG00000016819) yipf3 (ENSELUG00000016794) ncoa4 (ENSELUG00000016764) ENSELUG00000016738 ENSELUG00000016707 QKI (ENSELUG00000016698) prkn (ENSELUG00000016662) ENSELUG00000016617 #22 UBR2 (ENSELUG00000016522) prph2b (ENSELUG00000016256) ENSELUG00000029784 pkdcca (ENSELUG00000016230) ENSELUG00000033040 ENSELUG00000000614 ENSELUG00000016176 EML4 (ENSELUG00000016121) ENSELUG00000024859 ENSELUG00000016020 ENSELUG00000026063 COX7A2L (ENSELUG00000016004) KCNG3 (ENSELUG00000015977) OXER1 (ENSELUG00000015970) ENSELUG00000025235 Acanthomorphata ANCESTRAL SPECIES 93 ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000172797 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000003256 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00390000001205.a ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000154815.b.b ENSGT00940000159658.a.a Euacanthomorphacea ANCESTRAL SPECIES 60 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000172797 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00390000001205.a ENSGT00390000003039 ENSGT00940000158434 Percomorphaceae ANCESTRAL SPECIES 45 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000172797 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Percomorphaceae_B ANCESTRAL SPECIES 4 ENSGT00940000153954 ENSGT00940000172797 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00730000112471 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000154815.b.b ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Percomorphaceae_C ANCESTRAL SPECIES 18 ENSGT00940000153954 ENSGT00940000172797 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00730000112471 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000154815.b.b ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Percomorphaceae_D ANCESTRAL SPECIES 26 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00730000112471 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000154815.b.b ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Carangaria ANCESTRAL SPECIES 33 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000154815.b.b ENSGT00940000159658.a.a ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B Carangaria_A ANCESTRAL SPECIES 76 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000154815.b.b ENSGT00940000159658.a.a ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B Seriola ANCESTRAL SPECIES 161 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000154815.b.b ENSGT00940000159658.a.a ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000163454.a.a.a.b.a.a.a.b Yellowtail amberjack MODERN SPECIES 2769 ENSSLDG00000001019 ENSSLDG00000001047 tspan14 (ENSSLDG00000001115) ENSSLDG00000001153 KCNG3 (ENSSLDG00000001176) ENSSLDG00000001189 QKI (ENSSLDG00000001293) prkn (ENSSLDG00000001325) ENSSLDG00000001378 #22 UBR2 (ENSSLDG00000001486) prph2b (ENSSLDG00000001652) ENSSLDG00000001673 Barramundi perch MODERN SPECIES 632 KCNG3 (ENSLCAG00010016672) ENSLCAG00010016670 tspan14 (ENSLCAG00010016665) EML4 (ENSLCAG00010015412) ENSLCAG00010015010 QKI (ENSLCAG00010015002) prkn (ENSLCAG00010014995) ENSLCAG00010014974 #22 UBR2 (ENSLCAG00010014954) prph2b (ENSLCAG00010014921) Anabantaria ANCESTRAL SPECIES 38 ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000154815.b.b ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Zig-zag eel MODERN SPECIES 6 CST7 (ENSMAMG00000022492) SYNDIG1 (ENSMAMG00000022489) ENSMAMG00000022485 ENSMAMG00000022480 ppp2r5d (ENSMAMG00000022474) mea1 (ENSMAMG00000022473) ENSMAMG00000022469 ENSMAMG00000022467 ENSMAMG00000022464 ENSMAMG00000022460 yipf3 (ENSMAMG00000022454) ncoa4 (ENSMAMG00000022452) ENSMAMG00000026062 ENSMAMG00000027318 prkn (ENSMAMG00000022445) ENSMAMG00000028121 #22 ENSMAMG00000022444 ENSMAMG00000022441 ENSMAMG00000022439 ENSMAMG00000026809 ENSMAMG00000022435 ENSMAMG00000022431 ENSMAMG00000025279 ENSMAMG00000022427 ENSMAMG00000022424 NCKAP1 (ENSMAMG00000022418) ENSMAMG00000022417 ZC3H15 (ENSMAMG00000022415) ENSMAMG00000022413 ENSMAMG00000022412 ENSMAMG00000027495 Eupercaria ANCESTRAL SPECIES 15 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000154815.b.b ENSGT00940000159658.a.a ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000172797 ENSGT00940000153954 Eupecaria_A ANCESTRAL SPECIES 1 ENSGT00940000153954 ENSGT00940000172797 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00730000112471 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000154815.b.b ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Ballan wrasse MODERN SPECIES 251 prdx3 (ENSLBEG00000023267) tm9sf3 (ENSLBEG00000023217) MOCOS (ENSLBEG00000023165) zgc:110045 (ENSLBEG00000023074) vwc2 (ENSLBEG00000023043) ikzf1 (ENSLBEG00000023024) fignl1 (ENSLBEG00000023009) ttl (ENSLBEG00000022981) ENSLBEG00000022960 EML4 (ENSLBEG00000022841) tspan14 (ENSLBEG00000022753) ENSLBEG00000022740 KCNG3 (ENSLBEG00000022725) QKI (ENSLBEG00000022702) prkn (ENSLBEG00000022622) ENSLBEG00000022556 #22 UBR2 (ENSLBEG00000022453) prph2b (ENSLBEG00000022386) ENSLBEG00000022330 ENSLBEG00000022301 ncoa4 (ENSLBEG00000022251) yipf3 (ENSLBEG00000022187) dnph1 (ENSLBEG00000022160) ENSLBEG00000022136 Eupecaria_B ANCESTRAL SPECIES 3 ENSGT00940000168290 ENSGT00940000170622 ENSGT00950000183147.B ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00730000112471 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000154815.b.b ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Eupecaria_C ANCESTRAL SPECIES 49 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000154815.b.b ENSGT00940000162367.f ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00950000183147.B ENSGT00940000153954 Eupercaria_incertae_sedis ANCESTRAL SPECIES 58 ENSGT00390000000614 ENSGT00940000168290 ENSGT00940000153954 ENSGT00950000183147.B ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00940000162367.f ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000154815.b.b ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 European seabass MODERN SPECIES 159 ENSDLAG00005029419 ENSDLAG00005020168 ENSDLAG00005032278 ENSDLAG00005030669 ENSDLAG00005031153 ENSDLAG00005026380 ENSDLAG00005032869 ENSDLAG00005029291 yipf3 (ENSDLAG00005029699) ncoa4 (ENSDLAG00005019204) ENSDLAG00005019223 ENSDLAG00005034910 ENSDLAG00005014533 ENSDLAG00005027265 ENSDLAG00005028826 ENSDLAG00005026771 #22 ENSDLAG00005033924 ENSDLAG00005027461 ENSDLAG00005028633 ENSDLAG00005027096 ENSDLAG00005017883 ENSDLAG00005013738 ENSDLAG00005029623 Perciformes ANCESTRAL SPECIES 49 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000154815.b.b ENSGT00940000159658.a.a ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00730000112471 ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000170622 ENSGT00940000168290 ENSGT00940000172797 Perciformes_a ANCESTRAL SPECIES ENSGT00910000144630.a #22 Pike perch MODERN SPECIES 394 ENSSLUG00000014971 #22 ENSSLUG00000015003 ENSSLUG00000015010 UBR2 (ENSSLUG00000015250) ENSSLUG00000019566 prph2b (ENSSLUG00000019570) ENSSLUG00000019579 ncoa4 (ENSSLUG00000019580) yipf3 (ENSSLUG00000019585) dnph1 (ENSSLUG00000019589) ENSSLUG00000019611 Cottioidei ANCESTRAL SPECIES 59 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000162367.f ENSGT00390000008403 ENSGT00940000153766.A ENSGT00390000001216 ENSGT00940000164045 ENSGT00940000160761 ENSGT00390000003256 ENSGT00390000016927 ENSGT01030000234620.a.a.a.b ENSGT00390000000614 ENSGT00940000170622 ENSGT00940000168290 ENSGT00940000172797 Lumpfish MODERN SPECIES 6 ENSCLMG00005014198 ENSCLMG00005014199 tspan14 (ENSCLMG00005014200) ENSCLMG00005014202 prkn (ENSCLMG00005014203) ENSCLMG00005014204 ENSCLMG00005014205 #22 UBR2 (ENSCLMG00005014234) PRPH2 (ENSCLMG00005015602) ENSCLMG00005015603 ncoa4 (ENSCLMG00005001362) yipf3 (ENSCLMG00005001411) dnph1 (ENSCLMG00005001477) ENSCLMG00005001490 DLK2 (ENSCLMG00005001504) LRRC73 (ENSCLMG00005001519) mea1 (ENSCLMG00005001543) PPP2R5D (ENSCLMG00005001730) ENSCLMG00005002006 gins1 (ENSCLMG00005002187) abhd12 (ENSCLMG00005002188) ENSCLMG00005002189 Ovalentaria ANCESTRAL SPECIES 18 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00730000112471 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000154815.b.b ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Atherinomorphae ANCESTRAL SPECIES 41 ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01040000241272 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00730000112471 ENSGT01030000236263 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Cyprinodontiformes ANCESTRAL SPECIES 37 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000159658.a.a ENSGT00940000178738 ENSGT00940000160277 ENSGT00440000039984.a ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT01030000236263 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01040000241272 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00940000158550 ENSGT01100000263520.a.a.b.a.a ENSGT00940000157776.d Aplocheiloidei ANCESTRAL SPECIES 128 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000159658.a.a ENSGT00940000178738 ENSGT00440000039984.a ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 Turquoise killifish MODERN SPECIES 22 ENSNFUG00015015070 tspan14 (ENSNFUG00015015088) ENSNFUG00015015107 KCNG3 (ENSNFUG00015015114) ENSNFUG00015015126 apmap (ENSNFUG00015015131) DNPH1 (ENSNFUG00015015168) yipf3 (ENSNFUG00015015244) ncoa4 (ENSNFUG00015015451) ENSNFUG00015015457 ENSNFUG00015015464 prkn (ENSNFUG00015015478) ENSNFUG00015015528 #22 Mangrove rivulus MODERN SPECIES 233 ENSKMAG00000002435 ENSKMAG00000002418 ENSKMAG00000002394 ENSKMAG00000002373 #22 UBR2 (ENSKMAG00000002216) prph2b (ENSKMAG00000002178) ENSKMAG00000002154 CUL7 (ENSKMAG00000000592) ENSKMAG00000000458 ENSKMAG00000000435 ENSKMAG00000000414 ppp2r5d (ENSKMAG00000000343) ENSKMAG00000000323 LRRC73 (ENSKMAG00000000283) ENSKMAG00000000253 ENSKMAG00000000236 ENSKMAG00000000227 Cyprinodontoidei ANCESTRAL SPECIES 40 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000159658.a.a ENSGT00940000178738 ENSGT00940000160277 ENSGT00440000039984.a ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT01030000236263 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01040000241272 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00940000158550 ENSGT01100000263520.a.a.b.a.a ENSGT00940000157776.d Poeciliinae ANCESTRAL SPECIES 36 ENSGT00940000166655 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000160277 ENSGT00440000039984.a ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT01030000236263 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00940000158550 ENSGT01100000263520.a.a.b.a.a ENSGT00940000157776.d ENSGT00940000160793 Platyfish MODERN SPECIES 14 EML4 (ENSXMAG00000009050) tspan14 (ENSXMAG00000009071) ENSXMAG00000009082 apmap (ENSXMAG00000009084) dnph1 (ENSXMAG00000025860) ENSXMAG00000028806 yipf3 (ENSXMAG00000022186) ENSXMAG00000023212 ncoa4 (ENSXMAG00000002456) ENSXMAG00000024034 ENSXMAG00000025345 ENSXMAG00000027850 ENSXMAG00000028741 ENSXMAG00000028431 prkn (ENSXMAG00000003878) ENSXMAG00000021413 #22 UBR2 (ENSXMAG00000016386) ENSXMAG00000029313 prph2b (ENSXMAG00000016497) ENSXMAG00000023176 ENSXMAG00000022911 ENSXMAG00000025290 ENSXMAG00000027816 ENSXMAG00000029387 ppp2r5d (ENSXMAG00000016157) ENSXMAG00000027241 mea1 (ENSXMAG00000016153) LRRC73 (ENSXMAG00000029484) DLK2 (ENSXMAG00000024822) ENSXMAG00000016136 ENSXMAG00000029065 Poecilia ANCESTRAL SPECIES 59 ENSGT00940000166655 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000160277 ENSGT00440000039984.a ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT01030000236263 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00950000183147.B ENSGT00940000153954.qb.a ENSGT00940000153954.qb.b ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00940000158550 ENSGT01100000263520.a.a.b.a.a ENSGT00940000157776.d Guppy MODERN SPECIES 445 ENSPREG00000013870 ENSPREG00000013852 ENSPREG00000013824 tspan14 (ENSPREG00000013816) ENSPREG00000013811 ENSPREG00000013796 apmap (ENSPREG00000013778) dnph1 (ENSPREG00000013768) yipf3 (ENSPREG00000013751) ncoa4 (ENSPREG00000013735) ENSPREG00000013726 ENSPREG00000013710 #22 ENSPREG00000013695 ENSPREG00000013668 prph2b (ENSPREG00000013649) ENSPREG00000013633 ENSPREG00000013619 ENSPREG00000013602 ENSPREG00000013579 ENSPREG00000013569 ENSPREG00000013514 ENSPREG00000013474 mea1 (ENSPREG00000013461) LRRC73 (ENSPREG00000013444) ENSPREG00000013436 ENSPREG00000013417 ENSPREG00000013404 NAME_6 ANCESTRAL SPECIES 205 ENSGT00940000160277 ENSGT00440000039984.a ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT01030000236263 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00950000183147.B ENSGT00940000153954.qb.a ENSGT00940000153954.qb.b ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00940000158550 ENSGT01100000263520.a.a.b.a.a ENSGT00940000157776.d Amazon molly MODERN SPECIES 930 ENSPFOG00000005999 apmap (ENSPFOG00000005885) dnph1 (ENSPFOG00000005821) yipf3 (ENSPFOG00000005709) ncoa4 (ENSPFOG00000005630) ENSPFOG00000005622 ENSPFOG00000023281 prkn (ENSPFOG00000005450) ENSPFOG00000005389 #22 UBR2 (ENSPFOG00000003667) prph2b (ENSPFOG00000003489) ENSPFOG00000003479 ENSPFOG00000003358 ENSPFOG00000003324 Sailfin molly MODERN SPECIES 2942 ENSPLAG00000018748 #22 ENSPLAG00000018768 ENSPLAG00000000758 prph2b (ENSPLAG00000018809) ENSPLAG00000018819 ENSPLAG00000018829 NAME_4 ANCESTRAL SPECIES 245 ENSGT00390000003039 ENSGT00940000158434 ENSGT00940000159235 ENSGT00940000159658.a.a ENSGT00940000178738 ENSGT00940000160277 ENSGT00440000039984.a ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00730000112471 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000153954 ENSGT00940000168290 Mummichog MODERN SPECIES 1158 ENSFHEG00000019919 ENSFHEG00000019965 #22 ENSFHEG00000019973 Sheepshead minnow MODERN SPECIES 1193 ENSCVAG00000009511 EML4 (ENSCVAG00000009497) tspan14 (ENSCVAG00000009338) KCNG3 (ENSCVAG00000009307) ENSCVAG00000009303 apmap (ENSCVAG00000009289) dnph1 (ENSCVAG00000009220) yipf3 (ENSCVAG00000009195) ncoa4 (ENSCVAG00000009157) ENSCVAG00000000253 ENSCVAG00000009140 ENSCVAG00000009136 ENSCVAG00000009118 ENSCVAG00000009108 #22 UBR2 (ENSCVAG00000009051) prph2b (ENSCVAG00000008955) ENSCVAG00000008951 ENSCVAG00000008920 ENSCVAG00000008895 Oryzias ANCESTRAL SPECIES 6 ENSGT00940000153954 ENSGT00940000172797 ENSGT00940000168290 ENSGT00390000000614 ENSGT01040000241272 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00730000112471 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000156754.a.a ENSGT00390000005203 ENSGT00940000155560.l ENSGT00940000155560.k.c ENSGT00940000155790 ENSGT00940000154711.a.a ENSGT00940000155930 ENSGT00940000164014.a.a ENSGT00390000016158 Oryzias_b ANCESTRAL SPECIES 7 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000172797 ENSGT00390000000614 ENSGT01040000241272 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00730000112471 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000156754.a.a ENSGT00390000005203 ENSGT00940000155560.l ENSGT00940000155790 ENSGT00940000154711.a.a ENSGT00940000182031 ENSGT00940000161285.a ENSGT00940000164014.a.b.b.a.a.a.b.a ENSGT00940000164014.a.b.b.a.a.b Javanese ricefish MODERN SPECIES 6 apmap (ENSOJAG00000007500) CST7 (ENSOJAG00000007531) SYNDIG1 (ENSOJAG00000007544) ENSOJAG00000009229 ENSOJAG00000009253 ppp2r5d (ENSOJAG00000009323) mea1 (ENSOJAG00000009565) LRRC73 (ENSOJAG00000009578) ENSOJAG00000009601 ENSOJAG00000009635 dnph1 (ENSOJAG00000009647) yipf3 (ENSOJAG00000009663) ncoa4 (ENSOJAG00000009677) ENSOJAG00000009756 prkn (ENSOJAG00000009769) ENSOJAG00000009844 #22 prph2b (ENSOJAG00000009923) KCNG3 (ENSOJAG00000009932) tspan14 (ENSOJAG00000009951) EML4 (ENSOJAG00000010190) ENSOJAG00000012745 ENSOJAG00000012753 ENSOJAG00000012768 ENSOJAG00000012794 ENSOJAG00000012898 ENSOJAG00000012912 ENSOJAG00000012973 ENSOJAG00000012991 ENSOJAG00000013238 ENSOJAG00000015135 PRKCE (ENSOJAG00000015182) Indian medaka MODERN SPECIES 27 SYNDIG1 (ENSOMEG00000022278) CUL7 (ENSOMEG00000022216) ENSOMEG00000022031 ENSOMEG00000021957 ENSOMEG00000021912 ppp2r5d (ENSOMEG00000021899) mea1 (ENSOMEG00000021885) LRRC73 (ENSOMEG00000021865) DLK2 (ENSOMEG00000021843) ENSOMEG00000021792 dnph1 (ENSOMEG00000021767) yipf3 (ENSOMEG00000021759) ncoa4 (ENSOMEG00000021751) ENSOMEG00000021741 prkn (ENSOMEG00000021728) ENSOMEG00000021681 #22 UBR2 (ENSOMEG00000020662) prph2b (ENSOMEG00000017960) KCNG3 (ENSOMEG00000017940) tspan14 (ENSOMEG00000017924) EML4 (ENSOMEG00000017876) ENSOMEG00000017755 ENSOMEG00000017741 id4 (ENSOMEG00000017701) cep76 (ENSOMEG00000017644) ENSOMEG00000017540 ENSOMEG00000017459 ENSOMEG00000017366 PRKCE (ENSOMEG00000017287) epas1b (ENSOMEG00000017236) lhb (ENSOMEG00000017138) Oryzias_a ANCESTRAL SPECIES 4 ENSGT00440000039984.a ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000156754.a.a ENSGT00390000005203 ENSGT00940000155560.l ENSGT00940000164014.a.a ENSGT00390000016158 ENSGT00940000161285.a ENSGT00940000164014.a.b.b.a.a.a.b.a ENSGT00940000164014.a.b.b.a.a.b ENSGT00940000164014.a.b.b.a.a.a.b.b Japanese Medaka HdrR MODERN SPECIES 6 ENSORLG00000023888 ENSORLG00000003131 ENSORLG00000026208 ppp2r5d (ENSORLG00000003171) mea1 (ENSORLG00000003180) LRRC73 (ENSORLG00000003187) ENSORLG00000003193 ENSORLG00000003209 dnph1 (ENSORLG00000003216) ENSORLG00000026021 ##36 ENSORLG00000029764 ##36 yipf3 (ENSORLG00000003250) ncoa4 (ENSORLG00000003269) ENSORLG00000026680 prkn (ENSORLG00000029510) ENSORLG00000025354 #22 UBR2 (ENSORLG00000003350) ENSORLG00000003361 KCNG3 (ENSORLG00000003367) tspan14 (ENSORLG00000003423) EML4 (ENSORLG00000003456) ENSORLG00000003462 ENSORLG00000025158 ENSORLG00000029935 ENSORLG00000024904 ENSORLG00000022583 ENSORLG00000023819 ENSORLG00000003469 ENSORLG00000003498 PRKCE (ENSORLG00000003528) epas1b (ENSORLG00000003535) Chinese medaka MODERN SPECIES 1044 ENSOSIG00000008482 ppp2r5d (ENSOSIG00000006572) mea1 (ENSOSIG00000006519) LRRC73 (ENSOSIG00000006518) DLK2 (ENSOSIG00000006516) ENSOSIG00000006515 ncoa4 (ENSOSIG00000006459) prkn (ENSOSIG00000006343) ENSOSIG00000006337 #22 prph2b (ENSOSIG00000006223) KCNG3 (ENSOSIG00000006217) tspan14 (ENSOSIG00000006216) EML4 (ENSOSIG00000005332) ENSOSIG00000005322 ENSOSIG00000005321 Ovalentaria_B ANCESTRAL SPECIES 7 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00730000112471 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000154815.b.b ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Pomacentridae ANCESTRAL SPECIES 131 ENSGT00940000154411 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00730000112471 ENSGT00390000008403 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000154815.b.b ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Bicolor damselfish MODERN SPECIES 1147 ENSSPAG00000005815 ncoa4 (ENSSPAG00000005820) prkn (ENSSPAG00000005840) ENSSPAG00000005865 #22 UBR2 (ENSSPAG00000005915) prph2b (ENSSPAG00000005993) KCNG3 (ENSSPAG00000006006) ENSSPAG00000006021 tspan14 (ENSSPAG00000006044) EML4 (ENSSPAG00000006058) ENSSPAG00000006105 ENSSPAG00000006113 slc30a6 (ENSSPAG00000006132) ENSSPAG00000006156 Pomacentridae_A ANCESTRAL SPECIES 135 ENSGT00440000039984.a ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000154815.b.b ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 ENSGT00940000167655 ENSGT00940000166409 ENSGT00390000013968 ENSGT00660000095541.a.a Amphiprion ANCESTRAL SPECIES 33 ENSGT00940000156882 ENSGT00390000016988.b ENSGT00390000018807 ENSGT00390000015228 ENSGT00390000018786 ENSGT00940000155682.g.b ENSGT00940000162889 ENSGT01030000234576.D.a.a.b.b ENSGT00940000154411 ENSGT00940000158550 ENSGT00940000160793 ENSGT01100000263540.A.a ENSGT00940000167655.k ENSGT00390000008403 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a.m ENSGT00950000183075.a.a.a.a.n.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000154815.b.b ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Orange clownfish MODERN SPECIES 12 ENSAPEG00000016822 ENSAPEG00000016804 ENSAPEG00000016787 SYNDIG1 (ENSAPEG00000016767) ENSAPEG00000016731 apmap (ENSAPEG00000016615) ENSAPEG00000016601 acss1 (ENSAPEG00000016540) ENSAPEG00000016517 vsx1 (ENSAPEG00000016477) entpd6 (ENSAPEG00000016388) ENSAPEG00000016376 ENSAPEG00000016359 ncoa4 (ENSAPEG00000016283) prkn (ENSAPEG00000016250) ENSAPEG00000016194 #22 ENSAPEG00000016175 ENSAPEG00000016159 ENSAPEG00000016097 prph2b (ENSAPEG00000016078) KCNG3 (ENSAPEG00000016048) ENSAPEG00000015949 tspan14 (ENSAPEG00000015862) ENSAPEG00000015836 EML4 (ENSAPEG00000015691) ENSAPEG00000015670 ENSAPEG00000015601 abhd12 (ENSAPEG00000015565) gins1 (ENSAPEG00000015533) ninl (ENSAPEG00000015511) ENSAPEG00000015499 Cichlidae ANCESTRAL SPECIES 38 ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Pseudocrenilabrinae ANCESTRAL SPECIES 32 ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00940000181480 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Pseudocrenilabrinae_A ANCESTRAL SPECIES 11 ENSGT00940000160277 ENSGT00950000183147.B ENSGT00940000153954 ENSGT00940000168290 ENSGT00390000000614 ENSGT01030000234620.a.a.a.b ENSGT00390000016927 ENSGT00390000003256 ENSGT00940000160761 ENSGT00940000164045 ENSGT00390000001216 ENSGT00940000153766.A ENSGT00390000008403 ENSGT00940000181480 ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Haplochromini ANCESTRAL SPECIES 98 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Haplochromini_A ANCESTRAL SPECIES 104 ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Haplochromini_B ANCESTRAL SPECIES 87 ENSGT00940000164286.j.b.b ENSGT00530000068411 ENSGT00940000164412.a.a.a ENSGT00390000007683 ENSGT00390000014293.b ENSGT00510000047589 ENSGT01030000234642.a.b.b.d.a.e ENSGT00740000115593 ENSGT00940000155078.a.b.a.b ENSGT00810000125473.A ENSGT00390000009155 ENSGT00940000158698 ENSGT00940000164611.a.b ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000165756.B.g.a.b.a ENSGT00940000157303.e ENSGT00940000159658.a.a ENSGT00940000159235 ENSGT00940000158434 ENSGT00390000003039 Zebra mbuna MODERN SPECIES 1095 vps8 (ENSMZEG00005018464) ENSMZEG00005018455 ENSMZEG00005018450 chchd1 (ENSMZEG00005018448) ENSMZEG00005018440 galm (ENSMZEG00005018434) HNRNPLL (ENSMZEG00005018424) hells (ENSMZEG00005018414) rab1ab (ENSMZEG00005018407) ENSMZEG00005018401 ENSMZEG00005018394 tlx1 (ENSMZEG00005018376) ENSMZEG00005018367 ENSMZEG00005018363 prkn (ENSMZEG00005018356) ENSMZEG00005018348 #22 UBR2 (ENSMZEG00005018328) ENSMZEG00005018320 prph2b (ENSMZEG00005018317) KCNG3 (ENSMZEG00005018314) tspan14 (ENSMZEG00005018308) ENSMZEG00005018270 ENSMZEG00005018253 ENSMZEG00005018240 ENSMZEG00005018235 ENSMZEG00005018229 RIMS1 (ENSMZEG00005018210) asrgl1 (ENSMZEG00005018203) OGFRL1 (ENSMZEG00005018195) b3gat2 (ENSMZEG00005018189) smap1 (ENSMZEG00005018180) Eastern happy MODERN SPECIES 4 ENSACLG00000007194 ENSACLG00000007203 galm (ENSACLG00000007294) HNRNPLL (ENSACLG00000007597) hells (ENSACLG00000007613) rab1ab (ENSACLG00000007644) ENSACLG00000007666 ENSACLG00000007691 tlx1 (ENSACLG00000007705) ENSACLG00000007712 ENSACLG00000007720 ENSACLG00000007898 ENSACLG00000007900 ENSACLG00000007904 prkn (ENSACLG00000007913) ENSACLG00000007925 #22 ENSACLG00000007934 ENSACLG00000007941 ENSACLG00000007947 UBR2 (ENSACLG00000007953) ENSACLG00000008163 prph2b (ENSACLG00000008164) KCNG3 (ENSACLG00000008176) tspan14 (ENSACLG00000008180) EML4 (ENSACLG00000008192) Lyretail cichlid MODERN SPECIES 462 ENSNBRG00000009758 ENSNBRG00000009651 ENSNBRG00000009626 ENSNBRG00000009553 ppp2r5d (ENSNBRG00000009510) mea1 (ENSNBRG00000009492) LRRC73 (ENSNBRG00000009473) ENSNBRG00000009456 ENSNBRG00000009416 ENSNBRG00000009389 yipf3 (ENSNBRG00000009353) ncoa4 (ENSNBRG00000009323) ENSNBRG00000009304 ENSNBRG00000009287 prkn (ENSNBRG00000009234) ENSNBRG00000009196 #22 UBR2 (ENSNBRG00000009106) prph2b (ENSNBRG00000009087) KCNG3 (ENSNBRG00000009076) tspan14 (ENSNBRG00000009050) EML4 (ENSNBRG00000008919) ENSNBRG00000008878 Pinecone sodierfish MODERN SPECIES 6 ENSMMDG00005018716 ppp2r5d (ENSMMDG00005018729) ENSMMDG00005018825 LRRC73 (ENSMMDG00005005537) DLK2 (ENSMMDG00005005539) ENSMMDG00005005545 ENSMMDG00005005548 dnph1 (ENSMMDG00005005552) yipf3 (ENSMMDG00005005553) ncoa4 (ENSMMDG00005005929) ENSMMDG00005005935 QKI (ENSMMDG00005005941) ENSMMDG00005005947 prkn (ENSMMDG00005005950) ENSMMDG00005005952 ENSMMDG00005005955 #22 ENSMMDG00005005958 UBR2 (ENSMMDG00005006039) prph2b (ENSMMDG00005008020) pkdcca (ENSMMDG00005008029) KCNG3 (ENSMMDG00005008032) ENSMMDG00005008033 EML4 (ENSMMDG00005008132) tspan14 (ENSMMDG00005011047) Osteoglossiformes ANCESTRAL SPECIES 153 ENSGT00950000183027.a.b.c.a ENSGT00950000183054.b.d ENSGT00950000182924.A.b.a.a.j ENSGT00940000156481.a.a.a.b ENSGT00940000156237 ENSGT00940000156999 ENSGT00940000164412.a.a.b ENSGT00390000007683 ENSGT00390000014293.b ENSGT00570000079168.b.b.a ENSGT00390000008403 ENSGT00390000001094.ob ENSGT00940000155310.a.b ENSGT00390000011034 ENSGT00910000144630.a #22 ENSGT00950000183075.a.a.a.a ENSGT00940000157303.e ENSGT00940000159766.c ENSGT00390000001205.a ENSGT00940000158434.q ENSGT00390000003039 ENSGT00940000159658.b.a.c ENSGT01030000234573.B.c.b.a.f ENSGT00990000203619.A.b.b.b.a.e ENSGT00390000013008 ENSGT00940000161584.s.a ENSGT00390000015500 ENSGT00940000157675 ENSGT00390000010498 ENSGT00940000157985 P. kingsleyae MODERN SPECIES 184 LHCGR (ENSPKIG00000002456) GTF2A1L (ENSPKIG00000002477) ENSPKIG00000002489 STON1 (ENSPKIG00000002500) ppp1r21 (ENSPKIG00000002532) FOXN2 (ENSPKIG00000002583) ENSPKIG00000002607 msh6 (ENSPKIG00000002633) ENSPKIG00000002664 ENSPKIG00000002703 ncoa4 (ENSPKIG00000002720) TIMM23B (ENSPKIG00000002755) QKI (ENSPKIG00000002778) ENSPKIG00000002797 prkn (ENSPKIG00000002825) ENSPKIG00000002860 #22 UBR2 (ENSPKIG00000002992) prph2b (ENSPKIG00000003278) BICRAL (ENSPKIG00000003292) pkdcca (ENSPKIG00000003311) EML4 (ENSPKIG00000003370) ENSPKIG00000003518 ENSPKIG00000003534 ENSPKIG00000003560 ENSPKIG00000003571 ENSPKIG00000003587 KCNG3 (ENSPKIG00000003601) MTA3 (ENSPKIG00000003631) OXER1 (ENSPKIG00000003696) Spotted gar MODERN SPECIES 654 ENSLOCG00000016557 ttl (ENSLOCG00000016555) ENSLOCG00000016552 ZC3H6 (ENSLOCG00000016548) ENSLOCG00000016546 TMEM87B (ENSLOCG00000016544) MERTK (ENSLOCG00000016537) lhcgr (ENSLOCG00000016530) sft2d1 (ENSLOCG00000016529) PRR18 (ENSLOCG00000017366) TBXT (ENSLOCG00000016526) pde10a (ENSLOCG00000016520) C6orf118 (ENSLOCG00000016518) QKI (ENSLOCG00000016506) prkn (ENSLOCG00000016503) ENSLOCG00000016499 #22 UBR2 (ENSLOCG00000016483) prph2b (ENSLOCG00000016479) tbcc (ENSLOCG00000017365) BICRAL (ENSLOCG00000016477) pkdcca (ENSLOCG00000016475) EML4 (ENSLOCG00000016471) ENSLOCG00000016465 KCNG3 (ENSLOCG00000016461) mta3 (ENSLOCG00000016454) OXER1 (ENSLOCG00000016459) ENSLOCG00000017364 ENSLOCG00000016452 haao (ENSLOCG00000016447) ENSLOCG00000016446 THADA (ENSLOCG00000016430) Elephant shark MODERN SPECIES 1593 ENSCMIG00000015452 #29 TRIB1 (ENSCMIG00000015451) #30 lratd2a (ENSCMIG00000015450) #31 myca (ENSCMIG00000015447) #33 CALML3 (ENSCMIG00000015443) fam49bb (ENSCMIG00000015424) #37 asap1a (ENSCMIG00000014879) tmem65 (ENSCMIG00000014791) #21 ENSCMIG00000014770 FER1L6 (ENSCMIG00000014703) #20 rmdn1 (ENSCMIG00000014657) WWP1 (ENSCMIG00000014613) ENSCMIG00000014602 #22 MTSS1 (ENSCMIG00000014581) #23 ndufb9 (ENSCMIG00000014560) #25 ENSCMIG00000014558 ##22 ENSCMIG00000014553 ##22 riok1 (ENSCMIG00000014537) DSP (ENSCMIG00000014523) ENSCMIG00000014512 ENSCMIG00000014509 si:ch211-106n13.3 (ENSCMIG00000014505) zgc:101569 (ENSCMIG00000014501) bmp6 (ENSCMIG00000014499) txndc5 (ENSCMIG00000014493) ENSCMIG00000014488