Mus_B	ANCESTRAL SPECIES	15	ENSGT00940000155616.c.a	ENSGT00390000004064 #8	ENSGT00940000153393.B #9	ENSGT00940000161461 #10	ENSGT00940000157569 #11	ENSGT00940000156027 #12	ENSGT00940000160690 #13	ENSGT00390000017509 #14	ENSGT00390000003282.B #15	ENSGT00390000000616 #16	ENSGT00940000156062 #17	ENSGT00940000159798 #18	ENSGT00940000158273 #19	ENSGT00390000013266 #20	ENSGT00390000003839 #21	ENSGT00950000183077.a.b #22	ENSGT00940000156084 #23	ENSGT00390000017530 #24	ENSGT00390000017740.a.b #25	ENSGT00940000153973.c.a.a ##26	ENSGT00940000153973.c.a.b.b #26	ENSGT00390000014874 #27	ENSGT00530000063687.a #28	ENSGT00390000001016.b #29	ENSGT01030000234549.a.a.a.a.a.b.b #30	ENSGT00940000160900 #31	ENSGT01020000230394.e.b.a #32	ENSGT00940000155189 #33	ENSGT00940000153997.b.a.a #34	ENSGT00940000155716.g #35	ENSGT00940000155716.h ##35
Mouse	MODERN SPECIES	15	ENSMUSG00000121578 #7	Ghrl (ENSMUSG00000064177) #8	Sec13 (ENSMUSG00000030298) #9	Atp2b2 (ENSMUSG00000030302) #10	Slc6a11 (ENSMUSG00000030307) #11	Slc6a1 (ENSMUSG00000030310) #12	Hrh1 (ENSMUSG00000053004) #13	Atg7 (ENSMUSG00000030314) #14	Vgll4 (ENSMUSG00000030315) #15	Tamm41 (ENSMUSG00000030316) #16	Syn2 (ENSMUSG00000009394) #17	Timp4 (ENSMUSG00000030317) #18	Pparg (ENSMUSG00000000440) #19	Tsen2 (ENSMUSG00000042389) #20	Mkrn2os (ENSMUSG00000068011) #21	Mkrn2 (ENSMUSG00000000439) #22	Raf1 (ENSMUSG00000000441) #23	Tmem40 (ENSMUSG00000059900) #24	Cand2 (ENSMUSG00000030319) #25	Rpl32 (ENSMUSG00000057841) #26	Efcab12 (ENSMUSG00000030321) #27	Mbd4 (ENSMUSG00000030322) #28	Ift122 (ENSMUSG00000030323) #29	Rho (ENSMUSG00000030324) #30	H1f8 (ENSMUSG00000042279) #31	Plxnd1 (ENSMUSG00000030123) #32	Tmcc1 (ENSMUSG00000030126) #33	Washc2 (ENSMUSG00000024104) #34	Zfand4 (ENSMUSG00000042213) #35	Marchf8 (ENSMUSG00000025702) #36	Alox5 (ENSMUSG00000025701) #37
Mus_C	ANCESTRAL SPECIES	18	ENSGT00940000155616.c.a	ENSGT00390000004064 #8	ENSGT00940000153393.B #9	ENSGT00940000161461 #10	ENSGT00940000157569 #11	ENSGT00940000156027 #12	ENSGT00940000160690 #13	ENSGT00390000017509 #14	ENSGT00390000003282.B #15	ENSGT00390000000616 #16	ENSGT00940000156062 #17	ENSGT00940000159798 #18	ENSGT00940000158273 #19	ENSGT00390000013266 #20	ENSGT00390000003839 #21	ENSGT00950000183077.a.b #22	ENSGT00940000156084 #23	ENSGT00390000017530 #24	ENSGT00390000017740.a.b #25	ENSGT00940000153973.c.a.a ##26	ENSGT00390000014874 #27	ENSGT00530000063687.a #28	ENSGT00390000001016.b #29	ENSGT01030000234549.a.a.a.a.a.b.b #30	ENSGT00940000160900 #31	ENSGT01020000230394.e.b.a #32	ENSGT00940000155189 #33	ENSGT00940000153997.b.a.a #34	ENSGT00940000155716.g #35	ENSGT00940000155716.h ##35	ENSGT00940000158282 #36
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	3022						Atg7 (ENSMSIG00000031927) #14	ENSMSIG00000031929	ENSMSIG00000031930 #15	ENSMSIG00000031931 #16	Syn2 (ENSMSIG00000031932) #17	ENSMSIG00000031933	Timp4 (ENSMSIG00000031934) #18	Pparg (ENSMSIG00000031935) #19	Tsen2 (ENSMSIG00000031936) #20	Mkrn2os (ENSMSIG00000031937) #21	ENSMSIG00000031938 #22	Raf1 (ENSMSIG00000000188) #23	Tmem40 (ENSMSIG00000000359) #24	Cand2 (ENSMSIG00000000651) #25	Rpl32 (ENSMSIG00000000692) ##26	Efcab12 (ENSMSIG00000000741) #27	Mbd4 (ENSMSIG00000000793) #28	Ift122 (ENSMSIG00000000881) #29	Rho (ENSMSIG00000001309) #30	ENSMSIG00000001359	H1f8 (ENSMSIG00000001367) #31	ENSMSIG00000001422 #32	Tmcc1 (ENSMSIG00000001659) #33	ENSMSIG00000001776	Washc2 (ENSMSIG00000001796) #34	Zfand4 (ENSMSIG00000001904) #35
Steppe mouse	MODERN SPECIES	2895						ENSMSIG00000001198	Soga3 (ENSMSIG00000001173)	9330159F19Rik (ENSMSIG00000001137)	ENSMSIG00000001121	Rnf146 (ENSMSIG00000001088)	Rspo3 (ENSMSIG00000001044)	ENSMSIG00000001036	ENSMSIG00000001019	Cenpw (ENSMSIG00000000994)	ENSMSIG00000000980	ENSMSIG00000000946 #22	Trmt11 (ENSMSIG00000000873)
spretus	MODERN SPECIES	15	Ghrl (MGP_SPRETEiJ_G0029767) #8	Sec13 (MGP_SPRETEiJ_G0029768) #9	Atp2b2 (MGP_SPRETEiJ_G0029769) #10	Slc6a11 (MGP_SPRETEiJ_G0029770) #11	Slc6a1 (MGP_SPRETEiJ_G0029771) #12	Hrh1 (MGP_SPRETEiJ_G0029772) #13	Atg7 (MGP_SPRETEiJ_G0029773) #14	Vgll4 (MGP_SPRETEiJ_G0029774) #15	Tamm41 (MGP_SPRETEiJ_G0029775) #16	Syn2 (MGP_SPRETEiJ_G0029776) #17	MGP_SPRETEiJ_G0029777	Timp4 (MGP_SPRETEiJ_G0029778) #18	Pparg (MGP_SPRETEiJ_G0029779) #19	Tsen2 (MGP_SPRETEiJ_G0029780) #20	Mkrn2os (MGP_SPRETEiJ_G0029781) #21	Mkrn2 (MGP_SPRETEiJ_G0029782) #22	Raf1 (MGP_SPRETEiJ_G0029783) #23	Tmem40 (MGP_SPRETEiJ_G0029784) #24	Cand2 (MGP_SPRETEiJ_G0029785) #25	MGP_SPRETEiJ_G0029786 ##26	Efcab12 (MGP_SPRETEiJ_G0029787) #27	Mbd4 (MGP_SPRETEiJ_G0029788) #28	Ift122 (MGP_SPRETEiJ_G0029789) #29	Rho (MGP_SPRETEiJ_G0029790) #30	H1f8 (MGP_SPRETEiJ_G0029791) #31	Plxnd1 (MGP_SPRETEiJ_G0029792) #32	MGP_SPRETEiJ_G0029793 #33	Washc2 (MGP_SPRETEiJ_G0029794) #34	Zfand4 (MGP_SPRETEiJ_G0029795) #35	MGP_SPRETEiJ_G0029796 ##35	Marchf8 (MGP_SPRETEiJ_G0029797) #36