Bilateria DUPLICATION Bilateria ANCESTRAL SPECIES ENSGT00950000183077.a #22 Chordata ANCESTRAL SPECIES ENSGT00950000183077.a #22 Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00950000183077.a.b #22 Gnathostomata ANCESTRAL SPECIES 33 ENSGT00940000156027 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109 ENSGT00940000164112 ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000164549 Euteleostomi ANCESTRAL SPECIES 9 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000154527.b ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 Sarcopterygii ANCESTRAL SPECIES 6 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000154527.b ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 Tetrapoda ANCESTRAL SPECIES 14 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000162955 Amniota ANCESTRAL SPECIES 22 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 Mammalia ANCESTRAL SPECIES 18 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A.f ENSGT00950000183041.A.e ENSGT00390000014109 ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 Theria ANCESTRAL SPECIES 28 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973 ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Eutheria ANCESTRAL SPECIES 14 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00940000153973.c.a.b.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00940000153973.c.a.b.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT00930000152979 ENSGT00940000175447 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 Primates ANCESTRAL SPECIES 1 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00940000153973.c.a.b.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 Haplorrhini ANCESTRAL SPECIES 5 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a Tarsier MODERN SPECIES 5029 PM20D2 (ENSTSYG00000027051) #16 GABRR1 (ENSTSYG00000033942) #17 PPARG (ENSTSYG00000006950) #18 TSEN2 (ENSTSYG00000010816) #19 MKRN2OS (ENSTSYG00000029616) #20 ENSTSYG00000030920 #21 MKRN2 (ENSTSYG00000007429) #22 RAF1 (ENSTSYG00000007438) #23 Simiiformes ANCESTRAL SPECIES 1 ENSGT00390000004064 ENSGT00940000153393.B.v ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00940000153973.c.a.b.b ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000013132 ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 Catarrhini ANCESTRAL SPECIES 2 ENSGT00940000153393.B.v ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00390000016970.h ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00940000153973.c.a.b.b ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 Hominoidea ANCESTRAL SPECIES 2 ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.a.c ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00390000016970.h ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266.a #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a.d ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583.i Gibbon MODERN SPECIES 13 SEC13 (ENSNLEG00000004482) ENSNLEG00000026798 SLC6A11 (ENSNLEG00000004525) SLC6A1 (ENSNLEG00000026605) ENSNLEG00000030870 HRH1 (ENSNLEG00000018917) ATG7 (ENSNLEG00000027005) VGLL4 (ENSNLEG00000004535) ENSNLEG00000004559 TIMP4 (ENSNLEG00000004638) ENSNLEG00000004578 ENSNLEG00000029797 PPARG (ENSNLEG00000004650) #18 TSEN2 (ENSNLEG00000004696) #19 MKRN2OS (ENSNLEG00000030256) #20 MKRN2 (ENSNLEG00000004711) #22 RAF1 (ENSNLEG00000004732) #23 TMEM40 (ENSNLEG00000004755) CAND2 (ENSNLEG00000004774) ENSNLEG00000035616 ENSNLEG00000004798 IQSEC1 (ENSNLEG00000004793) NUP210 (ENSNLEG00000004799) HDAC11 (ENSNLEG00000004853) FBLN2 (ENSNLEG00000004881) ENSNLEG00000004941 CHCHD4 (ENSNLEG00000029809) TMEM43 (ENSNLEG00000004956) XPC (ENSNLEG00000005000) LSM3 (ENSNLEG00000005079) SLC6A6 (ENSNLEG00000005084) Hominidae ANCESTRAL SPECIES 2 ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.a.c ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00390000016970.h ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266.a #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a.d ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583.i Orangutan MODERN SPECIES 16 CLDND1 (ENSPPYG00000013614) OR5K2 (ENSPPYG00000013615) OR5K1 (ENSPPYG00000013616) ENSPPYG00000013618 GABRR3 (ENSPPYG00000013620) RIOX2 (ENSPPYG00000013621) CRYBG3 (ENSPPYG00000033155) ARL6 (ENSPPYG00000013623) EPHA6 (ENSPPYG00000013624) ENSPPYG00000013626 NSUN3 (ENSPPYG00000037583) DHFR2 (ENSPPYG00000013628) ARL13B (ENSPPYG00000013629) STX19 (ENSPPYG00000013630) ENSPPYG00000013631 MKRN2 (ENSPPYG00000013387) #22 RAF1 (ENSPPYG00000013388) #23 TMEM40 (ENSPPYG00000013389) CAND2 (ENSPPYG00000013390) ENSPPYG00000037343 IQSEC1 (ENSPPYG00000013393) NUP210 (ENSPPYG00000013394) HDAC11 (ENSPPYG00000013395) FBLN2 (ENSPPYG00000013396) WNT7A (ENSPPYG00000013397) CHCHD4 (ENSPPYG00000025890) TMEM43 (ENSPPYG00000013400) XPC (ENSPPYG00000013401) LSM3 (ENSPPYG00000013402) SLC6A6 (ENSPPYG00000013403) GRIP2 (ENSPPYG00000013404) Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.a.c ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00390000016970.h ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266.a #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00940000153309.c.a.e.b ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a.d ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 Gorilla MODERN SPECIES 16 SLC6A11 (ENSGGOG00000000379) SLC6A1 (ENSGGOG00000000382) ENSGGOG00000016573 HRH1 (ENSGGOG00000038168) ATG7 (ENSGGOG00000003493) VGLL4 (ENSGGOG00000003500) ENSGGOG00000039682 SYN2 (ENSGGOG00000009751) TIMP4 (ENSGGOG00000009761) ENSGGOG00000038254 ENSGGOG00000038928 ENSGGOG00000043543 PPARG (ENSGGOG00000013117) #18 TSEN2 (ENSGGOG00000012488) #19 ENSGGOG00000041526 #20 MKRN2 (ENSGGOG00000000429) #22 RAF1 (ENSGGOG00000023025) #23 TMEM40 (ENSGGOG00000028438) ENSGGOG00000021954 CAND2 (ENSGGOG00000001004) RPL32 (ENSGGOG00000043568) IQSEC1 (ENSGGOG00000001008) NUP210 (ENSGGOG00000015096) HDAC11 (ENSGGOG00000007735) FBLN2 (ENSGGOG00000011561) ENSGGOG00000042871 WNT7A (ENSGGOG00000012654) CHCHD4 (ENSGGOG00000024077) TMEM43 (ENSGGOG00000016577) XPC (ENSGGOG00000009997) LSM3 (ENSGGOG00000010006) Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.a.c ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00390000016970.h ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266.a #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00940000153309.c.a.e.b ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000013132.q.a.d ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583.i Human MODERN SPECIES 15 ENSG00000289763 GHRL (ENSG00000157017) SEC13 (ENSG00000157020) ATP2B2 (ENSG00000157087) SLC6A11 (ENSG00000132164) SLC6A1 (ENSG00000157103) HRH1 (ENSG00000196639) ATG7 (ENSG00000197548) VGLL4 (ENSG00000144560) TAMM41 (ENSG00000144559) SYN2 (ENSG00000157152) TIMP4 (ENSG00000157150) PPARG (ENSG00000132170) #18 TSEN2 (ENSG00000154743) #19 MKRN2OS (ENSG00000225526) #20 MKRN2 (ENSG00000075975) #22 RAF1 (ENSG00000132155) #23 TMEM40 (ENSG00000088726) CAND2 (ENSG00000144712) ENSG00000289809 RPL32 (ENSG00000144713) IQSEC1 (ENSG00000144711) NUP210 (ENSG00000132182) HDAC11 (ENSG00000163517) FBLN2 (ENSG00000163520) WNT7A (ENSG00000154764) CHCHD4 (ENSG00000163528) TMEM43 (ENSG00000170876) XPC (ENSG00000154767) LSM3 (ENSG00000170860) SLC6A6 (ENSG00000131389) Pan ANCESTRAL SPECIES 2 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.a.c ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00390000016970.h ENSGT00940000156062 ENSGT00940000159798 ENSGT00910000148097 ENSGT00940000158273 #18 ENSGT00390000013266.a #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00940000153309.c.a.e.b ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00940000153973.c.a.b.b ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000013132.q.a.d ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 Bonobo MODERN SPECIES 16 ENSPPAG00000029625 SLC6A11 (ENSPPAG00000039217) SLC6A1 (ENSPPAG00000042842) HRH1 (ENSPPAG00000023416) ATG7 (ENSPPAG00000040386) VGLL4 (ENSPPAG00000035709) TAMM41 (ENSPPAG00000037692) ENSPPAG00000040309 SYN2 (ENSPPAG00000038622) TIMP4 (ENSPPAG00000036078) ENSPPAG00000030837 ENSPPAG00000028973 PPARG (ENSPPAG00000029006) #18 TSEN2 (ENSPPAG00000035317) #19 MKRN2OS (ENSPPAG00000032216) #20 MKRN2 (ENSPPAG00000036523) #22 RAF1 (ENSPPAG00000035239) #23 ENSPPAG00000024005 TMEM40 (ENSPPAG00000019163) ENSPPAG00000036413 CAND2 (ENSPPAG00000004317) RPL32 (ENSPPAG00000008188) IQSEC1 (ENSPPAG00000036448) ENSPPAG00000028546 NUP210 (ENSPPAG00000037715) HDAC11 (ENSPPAG00000037567) FBLN2 (ENSPPAG00000015671) WNT7A (ENSPPAG00000030187) CHCHD4 (ENSPPAG00000032925) TMEM43 (ENSPPAG00000000804) XPC (ENSPPAG00000043453) Chimpanzee MODERN SPECIES 16 SLC6A11 (ENSPTRG00000014621) SLC6A1 (ENSPTRG00000014622) ENSPTRG00000050374 HRH1 (ENSPTRG00000030304) ATG7 (ENSPTRG00000014625) VGLL4 (ENSPTRG00000014626) TAMM41 (ENSPTRG00000014628) ENSPTRG00000049448 SYN2 (ENSPTRG00000052430) TIMP4 (ENSPTRG00000014630) ENSPTRG00000043822 ENSPTRG00000045342 PPARG (ENSPTRG00000014632) #18 TSEN2 (ENSPTRG00000014633) #19 MKRN2OS (ENSPTRG00000046408) #20 MKRN2 (ENSPTRG00000014634) #22 RAF1 (ENSPTRG00000014635) #23 TMEM40 (ENSPTRG00000014636) ENSPTRG00000051489 CAND2 (ENSPTRG00000014637) ENSPTRG00000050657 IQSEC1 (ENSPTRG00000014639) ENSPTRG00000046540 NUP210 (ENSPTRG00000014640) HDAC11 (ENSPTRG00000014641) FBLN2 (ENSPTRG00000014642) WNT7A (ENSPTRG00000046824) CHCHD4 (ENSPTRG00000014647) TMEM43 (ENSPTRG00000014648) XPC (ENSPTRG00000014649) LSM3 (ENSPTRG00000014650) Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00390000016970.h ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084.bb #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a.a ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00940000153393.B.v ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084.bb #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00940000153973.c.a.b.b ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a.a ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00390000016970.h ENSGT00390000009405.b.c.b.b ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084.bb #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a.e.b ENSGT00940000153973.c.a.b.b ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a.a ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00390000016970.h ENSGT00390000009405.b.c.b.b ENSGT01100000263509.a.a.b.b.a.b.b.b.a.a.a.a.b.b ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084.bb #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a.d ENSGT00940000153973.c.a.b.b ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a.a ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 Cercopithecinae_d ANCESTRAL SPECIES 12 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00390000016970.h ENSGT00390000009405.b.c.b.b ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084.bb #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a.a ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 Drill MODERN SPECIES 874 SYN2 (ENSMLEG00000030880) TIMP4 (ENSMLEG00000040251) PPARG (ENSMLEG00000043422) #18 TSEN2 (ENSMLEG00000038210) #19 MKRN2OS (ENSMLEG00000006675) #20 MKRN2 (ENSMLEG00000006880) #22 RAF1 (ENSMLEG00000029839) #23 ENSMLEG00000039626 TMEM40 (ENSMLEG00000039986) CAND2 (ENSMLEG00000034596) RPL32 (ENSMLEG00000033655) IQSEC1 (ENSMLEG00000035708) NUP210 (ENSMLEG00000038717) HDAC11 (ENSMLEG00000038310) FBLN2 (ENSMLEG00000040866) WNT7A (ENSMLEG00000042427) ENSMLEG00000031201 TMEM43 (ENSMLEG00000035818) XPC (ENSMLEG00000041682) LSM3 (ENSMLEG00000036162) SLC6A6 (ENSMLEG00000040687) Sooty mangabey MODERN SPECIES 650 SLC6A11 (ENSCATG00000032556) SLC6A1 (ENSCATG00000019250) ENSCATG00000031939 HRH1 (ENSCATG00000000316) ATG7 (ENSCATG00000034745) VGLL4 (ENSCATG00000041543) TAMM41 (ENSCATG00000033399) ENSCATG00000031162 ENSCATG00000042881 SYN2 (ENSCATG00000031791) TIMP4 (ENSCATG00000034145) ENSCATG00000017268 PPARG (ENSCATG00000022947) #18 TSEN2 (ENSCATG00000031911) #19 MKRN2OS (ENSCATG00000040481) #20 MKRN2 (ENSCATG00000041591) #22 ENSCATG00000035852 #23 ENSCATG00000001547 ENSCATG00000031525 TMEM40 (ENSCATG00000027847) CAND2 (ENSCATG00000038720) RPL32 (ENSCATG00000038198) IQSEC1 (ENSCATG00000037864) NUP210 (ENSCATG00000035260) HDAC11 (ENSCATG00000026123) FBLN2 (ENSCATG00000038061) ENSCATG00000033105 WNT7A (ENSCATG00000033711) TMEM43 (ENSCATG00000038308) XPC (ENSCATG00000036725) ENSCATG00000039421 Olive baboon MODERN SPECIES 11 SEC13 (ENSPANG00000033927) ATP2B2 (ENSPANG00000012883) SLC6A11 (ENSPANG00000009913) SLC6A1 (ENSPANG00000009643) HRH1 (ENSPANG00000031157) ATG7 (ENSPANG00000019142) VGLL4 (ENSPANG00000024761) TAMM41 (ENSPANG00000025444) ENSPANG00000031360 ENSPANG00000045955 TIMP4 (ENSPANG00000001070) SYN2 (ENSPANG00000024762) PPARG (ENSPANG00000016461) #18 MKRN2OS (ENSPANG00000008481) #20 TSEN2 (ENSPANG00000013415) #19 MKRN2 (ENSPANG00000021307) #22 ENSPANG00000035680 RAF1 (ENSPANG00000008568) #23 TMEM40 (ENSPANG00000014208) CAND2 (ENSPANG00000018464) ENSPANG00000007693 IQSEC1 (ENSPANG00000006877) NUP210 (ENSPANG00000006878) HDAC11 (ENSPANG00000024163) ENSPANG00000047403 ENSPANG00000007694 WNT7A (ENSPANG00000046909) CHCHD4 (ENSPANG00000025946) TMEM43 (ENSPANG00000012906) XPC (ENSPANG00000004175) LSM3 (ENSPANG00000009378) Macaca ANCESTRAL SPECIES 5 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00390000016970.h ENSGT00390000009405.b.c.b.b ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084.bb #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.a.a ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000013132.q.a.a ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 Pig-tailed macaque MODERN SPECIES 546 ATP2B2 (ENSMNEG00000040193) SLC6A11 (ENSMNEG00000031997) SLC6A1 (ENSMNEG00000031841) ENSMNEG00000030516 HRH1 (ENSMNEG00000008240) ATG7 (ENSMNEG00000028392) VGLL4 (ENSMNEG00000039421) TAMM41 (ENSMNEG00000040547) ENSMNEG00000042157 ENSMNEG00000024024 SYN2 (ENSMNEG00000033226) TIMP4 (ENSMNEG00000028992) PPARG (ENSMNEG00000028217) #18 TSEN2 (ENSMNEG00000025898) #19 MKRN2OS (ENSMNEG00000034066) #20 MKRN2 (ENSMNEG00000031197) #22 RAF1 (ENSMNEG00000040519) #23 TMEM40 (ENSMNEG00000027829) CAND2 (ENSMNEG00000044168) RPL32 (ENSMNEG00000030893) IQSEC1 (ENSMNEG00000042270) ENSMNEG00000029455 NUP210 (ENSMNEG00000041495) HDAC11 (ENSMNEG00000040546) FBLN2 (ENSMNEG00000035537) WNT7A (ENSMNEG00000037464) ENSMNEG00000040402 TMEM43 (ENSMNEG00000032802) XPC (ENSMNEG00000038400) ENSMNEG00000043632 SLC6A6 (ENSMNEG00000040859) Macaca_a ANCESTRAL SPECIES 5 ENSGT00390000004064 ENSGT00940000153393.B.v ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT01100000263493.a.b.a.b.a.a.b.a.b.b.b.a.b.b.a.a.b.a.a ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084.bb #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a.e.b ENSGT00940000156915 ENSGT00390000009491.d ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.a.a.b.a.a.a.a.b ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000013132.r ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 Rhesus MODERN SPECIES 11 SEC13 (ENSMMUG00000019936) ATP2B2 (ENSMMUG00000019938) SLC6A11 (ENSMMUG00000005916) SLC6A1 (ENSMMUG00000005917) HRH1 (ENSMMUG00000056308) ATG7 (ENSMMUG00000021804) VGLL4 (ENSMMUG00000021806) ENSMMUG00000062782 TAMM41 (ENSMMUG00000013372) ENSMMUG00000055179 SYN2 (ENSMMUG00000001120) TIMP4 (ENSMMUG00000001127) PPARG (ENSMMUG00000007191) #18 TSEN2 (ENSMMUG00000007195) #19 MKRN2OS (ENSMMUG00000031993) #20 MKRN2 (ENSMMUG00000009536) #22 RAF1 (ENSMMUG00000007450) #23 TMEM40 (ENSMMUG00000010276) CAND2 (ENSMMUG00000001339) RPL32 (ENSMMUG00000001340) IQSEC1 (ENSMMUG00000001342) NUP210 (ENSMMUG00000015979) ENSMMUG00000056487 HDAC11 (ENSMMUG00000001369) FBLN2 (ENSMMUG00000017659) WNT7A (ENSMMUG00000018445) XPC (ENSMMUG00000023125) TMEM43 (ENSMMUG00000023124) SLC6A6 (ENSMMUG00000006340) GRIP2 (ENSMMUG00000006342) ENSMMUG00000062011 Crab-eating macaque MODERN SPECIES 11 SEC13 (ENSMFAG00000037200) ATP2B2 (ENSMFAG00000034151) SLC6A11 (ENSMFAG00000034176) SLC6A1 (ENSMFAG00000007438) HRH1 (ENSMFAG00000030336) ATG7 (ENSMFAG00000040779) VGLL4 (ENSMFAG00000009745) TAMM41 (ENSMFAG00000033931) ENSMFAG00000059255 SYN2 (ENSMFAG00000041997) ENSMFAG00000021078 TIMP4 (ENSMFAG00000052548) PPARG (ENSMFAG00000034317) #18 TSEN2 (ENSMFAG00000038583) #19 MKRN2OS (ENSMFAG00000031892) #20 MKRN2 (ENSMFAG00000035845) #22 ENSMFAG00000051059 RAF1 (ENSMFAG00000038061) #23 TMEM40 (ENSMFAG00000039365) CAND2 (ENSMFAG00000044298) ENSMFAG00000045190 IQSEC1 (ENSMFAG00000043873) NUP210 (ENSMFAG00000044461) ENSMFAG00000058794 HDAC11 (ENSMFAG00000036363) FBLN2 (ENSMFAG00000003835) WNT7A (ENSMFAG00000044809) ENSMFAG00000044351 TMEM43 (ENSMFAG00000047872) XPC (ENSMFAG00000031847) LSM3 (ENSMFAG00000063615) Vervet Monkey MODERN SPECIES 14 GHRL (ENSCSAG00000010031) SEC13 (ENSCSAG00000010026) ATP2B2 (ENSCSAG00000010018) ENSCSAG00000010009 SLC6A11 (ENSCSAG00000009991) SLC6A1 (ENSCSAG00000009912) HRH1 (ENSCSAG00000018810) ATG7 (ENSCSAG00000009887) VGLL4 (ENSCSAG00000009873) TAMM41 (ENSCSAG00000009866) SYN2 (ENSCSAG00000009855) TIMP4 (ENSCSAG00000009845) PPARG (ENSCSAG00000009839) #18 TSEN2 (ENSCSAG00000009822) #19 MKRN2OS (ENSCSAG00000009764) #20 MKRN2 (ENSCSAG00000009754) #22 RAF1 (ENSCSAG00000009721) #23 TMEM40 (ENSCSAG00000009604) CAND2 (ENSCSAG00000009557) RPL32 (ENSCSAG00000009485) IQSEC1 (ENSCSAG00000009482) NUP210 (ENSCSAG00000009474) HDAC11 (ENSCSAG00000009462) FBLN2 (ENSCSAG00000009449) WNT7A (ENSCSAG00000009439) CHCHD4 (ENSCSAG00000009431) TMEM43 (ENSCSAG00000009426) XPC (ENSCSAG00000009411) SLC6A6 (ENSCSAG00000009391) GRIP2 (ENSCSAG00000009353) CCDC174 (ENSCSAG00000009294) Rhinopithecus ANCESTRAL SPECIES 113 ENSGT00940000157569 ENSGT00940000156027 ENSGT00910000148795 ENSGT00390000013132.q.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00910000148924 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00390000016970.h ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273.r #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084.bb #23 Black snub-nosed monkey MODERN SPECIES 1833 PPARG (ENSRBIG00000042269) #18 TSEN2 (ENSRBIG00000033133) #19 MKRN2OS (ENSRBIG00000033018) #20 MKRN2 (ENSRBIG00000039128) #22 ENSRBIG00000029284 #23 ENSRBIG00000027349 Golden snub-nosed monkey MODERN SPECIES 2016 SLC6A11 (ENSRROG00000031463) SLC6A1 (ENSRROG00000040161) ENSRROG00000044510 HRH1 (ENSRROG00000012382) ATG7 (ENSRROG00000041008) ENSRROG00000038335 VGLL4 (ENSRROG00000032842) TAMM41 (ENSRROG00000034628) ENSRROG00000042628 SYN2 (ENSRROG00000040768) TIMP4 (ENSRROG00000043357) PPARG (ENSRROG00000044807) #18 ENSRROG00000034587 TSEN2 (ENSRROG00000041156) #19 MKRN2OS (ENSRROG00000037999) #20 MKRN2 (ENSRROG00000033767) #22 ENSRROG00000041930 #23 Platyrrhini ANCESTRAL SPECIES 18 ENSGT00940000153393.B.u.a ENSGT00910000147252 ENSGT00940000153393.B.v ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509.e ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000158890.q ENSGT00940000153973.c.a.b.a.b ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000013132.p ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 Cebidae ANCESTRAL SPECIES 14 ENSGT00940000153393.B.u.a ENSGT00910000147252 ENSGT00940000153393.B.v ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509.e ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000158890.q ENSGT00940000153973.c.a.b.b ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000013132.p ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 Cebidae_a ANCESTRAL SPECIES 47 ENSGT00940000153393.B.u.a ENSGT00910000147252 ENSGT00940000153393.B.v ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509.e ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000013132.p ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 Capuchin MODERN SPECIES 281 TATDN2 (ENSCCAG00000024974) GHRL (ENSCCAG00000022227) SEC13 (ENSCCAG00000026715) ATP2B2 (ENSCCAG00000032907) SLC6A11 (ENSCCAG00000030058) SLC6A1 (ENSCCAG00000026677) ATG7 (ENSCCAG00000035255) VGLL4 (ENSCCAG00000032615) TAMM41 (ENSCCAG00000025773) TIMP4 (ENSCCAG00000035892) SYN2 (ENSCCAG00000034848) PPARG (ENSCCAG00000027364) #18 TSEN2 (ENSCCAG00000037851) #19 MKRN2OS (ENSCCAG00000031553) #20 ENSCCAG00000022711 MKRN2 (ENSCCAG00000019802) #22 RAF1 (ENSCCAG00000023070) #23 TMEM40 (ENSCCAG00000020743) CAND2 (ENSCCAG00000032849) RPL32 (ENSCCAG00000025373) IQSEC1 (ENSCCAG00000024388) Bolivian squirrel monkey MODERN SPECIES 62 GHRL (ENSSBOG00000005768) ENSSBOG00000023709 ENSSBOG00000020409 ATP2B2 (ENSSBOG00000020057) SLC6A11 (ENSSBOG00000029132) SLC6A1 (ENSSBOG00000022090) HRH1 (ENSSBOG00000015886) ATG7 (ENSSBOG00000024304) VGLL4 (ENSSBOG00000026167) TAMM41 (ENSSBOG00000034374) TIMP4 (ENSSBOG00000032293) ENSSBOG00000030292 PPARG (ENSSBOG00000005712) #18 TSEN2 (ENSSBOG00000035499) #19 MKRN2OS (ENSSBOG00000033896) #20 MKRN2 (ENSSBOG00000034434) #22 RAF1 (ENSSBOG00000015492) #23 ACAP2 (ENSSBOG00000029437) XXYLT1 (ENSSBOG00000034641) FAM43A (ENSSBOG00000018424) LSG1 (ENSSBOG00000034938) TMEM44 (ENSSBOG00000020794) ATP13A3 (ENSSBOG00000005544) LRRC15 (ENSSBOG00000031469) CPN2 (ENSSBOG00000014283) ENSSBOG00000033814 HES1 (ENSSBOG00000028215) OPA1 (ENSSBOG00000021973) ATP13A4 (ENSSBOG00000032487) ATP13A5 (ENSSBOG00000030531) PLAAT1 (ENSSBOG00000030423) Marmoset DUPLICATION Marmoset MODERN SPECIES 6 SLC6A1 (ENSCJAG00000016551) ENSCJAG00000072589 ENSCJAG00000070697 ENSCJAG00000084863 HRH1 (ENSCJAG00000043961) ATG7 (ENSCJAG00000016583) ENSCJAG00000058577 VGLL4 (ENSCJAG00000016643) SYN2 (ENSCJAG00000016647) TIMP4 (ENSCJAG00000038791) PPARG (ENSCJAG00000016687) #18 ENSCJAG00000086839 ENSCJAG00000075859 TSEN2 (ENSCJAG00000080511) #19 MKRN2OS (ENSCJAG00000040602) #20 ENSCJAG00000016733 #22 RAF1 (ENSCJAG00000016737) #23 TMEM40 (ENSCJAG00000016751) CAND2 (ENSCJAG00000016770) ENSCJAG00000061647 IQSEC1 (ENSCJAG00000016781) NUP210 (ENSCJAG00000016795) HDAC11 (ENSCJAG00000016844) FBLN2 (ENSCJAG00000016873) WNT7A (ENSCJAG00000040771) TMEM43 (ENSCJAG00000016924) ENSCJAG00000072125 ENSCJAG00000087072 XPC (ENSCJAG00000016952) ENSCJAG00000042664 ENSCJAG00000079599 Marmoset MODERN SPECIES 16 ENSCJAG00000073079 ENSCJAG00000062395 HACE1 (ENSCJAG00000001597) LIN28B (ENSCJAG00000001671) BVES (ENSCJAG00000001683) POPDC3 (ENSCJAG00000001700) ENSCJAG00000071190 PREP (ENSCJAG00000001710) ENSCJAG00000074740 ENSCJAG00000085831 ATG5 (ENSCJAG00000006306) ENSCJAG00000079207 PRDM1 (ENSCJAG00000006332) ENSCJAG00000074624 CRYBG1 (ENSCJAG00000006246) ENSCJAG00000079990 #22 RTN4IP1 (ENSCJAG00000006218) QRSL1 (ENSCJAG00000006200) ENSCJAG00000058620 ENSCJAG00000073856 MTRES1 (ENSCJAG00000046921) BEND3 (ENSCJAG00000039628) ENSCJAG00000080202 PDSS2 (ENSCJAG00000006153) ENSCJAG00000076519 ENSCJAG00000084385 SOBP (ENSCJAG00000006119) SCML4 (ENSCJAG00000006102) SEC63 (ENSCJAG00000005998) OSTM1 (ENSCJAG00000040617) ENSCJAG00000070984 Mas night monkey MODERN SPECIES 321 CRELD1 (ENSANAG00000026557) ENSANAG00000021183 IL17RE (ENSANAG00000022892) CIDEC (ENSANAG00000024285) ENSANAG00000019292 HRH1 (ENSANAG00000031051) ENSANAG00000032758 ENSANAG00000012369 VGLL4 (ENSANAG00000038129) TAMM41 (ENSANAG00000037740) SYN2 (ENSANAG00000021892) TIMP4 (ENSANAG00000032042) PPARG (ENSANAG00000020115) #18 TSEN2 (ENSANAG00000026891) #19 MKRN2OS (ENSANAG00000026143) #20 MKRN2 (ENSANAG00000022646) #22 RAF1 (ENSANAG00000031934) #23 TMEM40 (ENSANAG00000036821) CAND2 (ENSANAG00000020366) ENSANAG00000020589 IQSEC1 (ENSANAG00000028368) NUP210 (ENSANAG00000036448) HDAC11 (ENSANAG00000035737) FBLN2 (ENSANAG00000027135) WNT7A (ENSANAG00000033071) CHCHD4 (ENSANAG00000034814) TMEM43 (ENSANAG00000036418) XPC (ENSANAG00000021069) LSM3 (ENSANAG00000034627) SLC6A6 (ENSANAG00000025733) GRIP2 (ENSANAG00000037475) Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Lemuriformes ANCESTRAL SPECIES 76 ENSGT00940000156915 ENSGT00940000157312 ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a Mouse lemur MODERN SPECIES 15 IQSEC1 (ENSMICG00000002633) ACAD9 (ENSMICG00000007418) ATP2B2 (ENSMICG00000002406) SLC6A11 (ENSMICG00000033698) SLC6A1 (ENSMICG00000003055) ATG7 (ENSMICG00000016547) ENSMICG00000035458 VGLL4 (ENSMICG00000016559) TAMM41 (ENSMICG00000016586) ENSMICG00000012731 SYN2 (ENSMICG00000003565) TIMP4 (ENSMICG00000045817) PPARG (ENSMICG00000016663) #18 TSEN2 (ENSMICG00000016672) #19 MKRN2OS (ENSMICG00000038087) #20 MKRN2 (ENSMICG00000012164) #22 RAF1 (ENSMICG00000012172) #23 ENSMICG00000033639 TMEM40 (ENSMICG00000003715) CAND2 (ENSMICG00000041434) ENSMICG00000034607 EFCAB12 (ENSMICG00000008010) MBD4 (ENSMICG00000008022) IFT122 (ENSMICG00000008033) RHO (ENSMICG00000047910) H1-8 (ENSMICG00000030377) PLXND1 (ENSMICG00000008079) ENSMICG00000028823 MSX2 (ENSMICG00000026941) NSG2 (ENSMICG00000035993) C5orf47 (ENSMICG00000047468) Lemuriformes_a ANCESTRAL SPECIES 162 ENSGT00940000156915 ENSGT00940000157312 ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a Coquerels sifaka MODERN SPECIES 614 ENSPCOG00000026952 IQSEC1 (ENSPCOG00000022781) ACAD9 (ENSPCOG00000028509) ENSPCOG00000027035 ATP2B2 (ENSPCOG00000022973) SLC6A11 (ENSPCOG00000012550) SLC6A1 (ENSPCOG00000027376) ATG7 (ENSPCOG00000021597) VGLL4 (ENSPCOG00000016845) TAMM41 (ENSPCOG00000021554) TIMP4 (ENSPCOG00000025232) SYN2 (ENSPCOG00000020181) PPARG (ENSPCOG00000017510) #18 TSEN2 (ENSPCOG00000019328) #19 MKRN2OS (ENSPCOG00000027519) #20 MKRN2 (ENSPCOG00000013481) #22 RAF1 (ENSPCOG00000013436) #23 ENSPCOG00000024646 TMEM40 (ENSPCOG00000027785) CAND2 (ENSPCOG00000020368) ENSPCOG00000026378 EFCAB12 (ENSPCOG00000020532) ENSPCOG00000018583 IFT122 (ENSPCOG00000023934) RHO (ENSPCOG00000024236) H1-8 (ENSPCOG00000024479) PLXND1 (ENSPCOG00000027312) Greater bamboo lemur MODERN SPECIES 130 SLC6A11 (ENSPSMG00000025382) SLC6A1 (ENSPSMG00000025445) HRH1 (ENSPSMG00000000102) ATG7 (ENSPSMG00000000247) VGLL4 (ENSPSMG00000000320) TAMM41 (ENSPSMG00000000346) SYN2 (ENSPSMG00000000398) TIMP4 (ENSPSMG00000000419) PPARG (ENSPSMG00000000463) #18 TSEN2 (ENSPSMG00000000537) #19 MKRN2OS (ENSPSMG00000000584) #20 MKRN2 (ENSPSMG00000000636) #22 RAF1 (ENSPSMG00000000725) #23 TMEM40 (ENSPSMG00000000837) ENSPSMG00000000888 CAND2 (ENSPSMG00000000926) ENSPSMG00000000953 EFCAB12 (ENSPSMG00000000969) MBD4 (ENSPSMG00000001016) IFT122 (ENSPSMG00000001543) RHO (ENSPSMG00000002457) H1-8 (ENSPSMG00000002466) ENSPSMG00000002470 Bushbaby MODERN SPECIES 216 HRH1 (ENSOGAG00000016172) ATG7 (ENSOGAG00000016175) VGLL4 (ENSOGAG00000016184) TAMM41 (ENSOGAG00000030657) ENSOGAG00000031076 ENSOGAG00000006595 TIMP4 (ENSOGAG00000016704) SYN2 (ENSOGAG00000016700) PPARG (ENSOGAG00000002971) #18 ENSOGAG00000002976 #19 MKRN2OS (ENSOGAG00000031425) #20 MKRN2 (ENSOGAG00000003255) #22 RAF1 (ENSOGAG00000003256) #23 TMEM40 (ENSOGAG00000003261) CAND2 (ENSOGAG00000028928) RPL32 (ENSOGAG00000028498) ENSOGAG00000010234 MBD4 (ENSOGAG00000010236) IFT122 (ENSOGAG00000010245) RHO (ENSOGAG00000010259) PLXND1 (ENSOGAG00000010266) ENSOGAG00000032612 TMCC1 (ENSOGAG00000010283) ENSOGAG00000031381 TRH (ENSOGAG00000017199) RBSN (ENSOGAG00000014042) MRPS25 (ENSOGAG00000014041) Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Tree shrew MODERN SPECIES 2688 TSEN2 (ENSTBEG00000011740) #19 ENSTBEG00000012118 #22 RAF1 (ENSTBEG00000012253) #23 Glires ANCESTRAL SPECIES 2 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Lagomorpha ANCESTRAL SPECIES 105 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000175447 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Rabbit MODERN SPECIES 20 LARS2 (ENSOCUG00000001964) ENSOCUG00000024922 LIMD1 (ENSOCUG00000001984) SACM1L (ENSOCUG00000026080) SLC6A20 (ENSOCUG00000004216) LZTFL1 (ENSOCUG00000010140) SLC6A11 (ENSOCUG00000001627) ENSOCUG00000025657 ATG7 (ENSOCUG00000001908) VGLL4 (ENSOCUG00000001911) TIMP4 (ENSOCUG00000015952) ENSOCUG00000015932 PPARG (ENSOCUG00000013194) #18 TSEN2 (ENSOCUG00000013203) #19 MKRN2OS (ENSOCUG00000033126) #20 MKRN2 (ENSOCUG00000014171) #22 RAF1 (ENSOCUG00000014175) #23 ENSOCUG00000031173 CAND2 (ENSOCUG00000009266) ENSOCUG00000023407 ENSOCUG00000012999 MBD4 (ENSOCUG00000013006) IFT122 (ENSOCUG00000013015) RHO (ENSOCUG00000013036) ENSOCUG00000029379 PLXND1 (ENSOCUG00000013049) TMCC1 (ENSOCUG00000013071) TRH (ENSOCUG00000006337) RBSN (ENSOCUG00000006988) MRPS25 (ENSOCUG00000006984) NR2C2 (ENSOCUG00000006975) Pika MODERN SPECIES 1896 TAMM41 (ENSOPRG00000003357) SYN2 (ENSOPRG00000003375) TIMP4 (ENSOPRG00000003424) PPARG (ENSOPRG00000003439) #18 TSEN2 (ENSOPRG00000003456) #19 MKRN2 (ENSOPRG00000003501) #22 RAF1 (ENSOPRG00000003522) #23 ENSOPRG00000003562 Rodentia ANCESTRAL SPECIES 2 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Rodentia_A ANCESTRAL SPECIES 27 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Hystricomorpha ANCESTRAL SPECIES 48 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT01020000230394.e.b.a ENSGT00390000016951 ENSGT00940000160900 ENSGT00940000155189 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Hystricomorpha_a ANCESTRAL SPECIES 6 ENSGT00940000155180.b ENSGT00940000156857 ENSGT00440000033504.B ENSGT00940000155867 ENSGT00940000161249 ENSGT00940000158225 ENSGT00950000182956.b.b.a.b ENSGT00940000158155 ENSGT00390000003219 ENSGT00940000158804 ENSGT00390000006066 ENSGT00390000005378 ENSGT00940000157200 ENSGT00940000157312.h ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000157922 ENSGT00940000153655.B ENSGT00440000033958 Guinea pig MODERN SPECIES 109 APBB1IP (ENSCPOG00000004077) GAD2 (ENSCPOG00000013724) ENSCPOG00000039199 ENSCPOG00000013721 ENSCPOG00000034310 GPR158 (ENSCPOG00000001565) ENSCPOG00000000291 ENKUR (ENSCPOG00000009590) ARHGAP21 (ENSCPOG00000004505) ENSCPOG00000031884 ENSCPOG00000005850 ITFG2 (ENSCPOG00000021230) FKBP4 (ENSCPOG00000002453) ENSCPOG00000009944 MKRN2OS (ENSCPOG00000032819) #20 MKRN2 (ENSCPOG00000001208) #22 RAF1 (ENSCPOG00000001210) #23 TMEM40 (ENSCPOG00000025632) CAND2 (ENSCPOG00000023286) RPL32 (ENSCPOG00000019967) ENSCPOG00000004970 IFT122 (ENSCPOG00000004975) RHO (ENSCPOG00000004984) PLXND1 (ENSCPOG00000004989) TMCC1 (ENSCPOG00000009299) RBSN (ENSCPOG00000003200) MRPS25 (ENSCPOG00000020398) NR2C2 (ENSCPOG00000001512) FGD5 (ENSCPOG00000013157) C3orf20 (ENSCPOG00000006783) CCDC174 (ENSCPOG00000039402) Hystricomorpha_b ANCESTRAL SPECIES 2 ENSGT00940000155180.b ENSGT00940000156857 ENSGT00440000033504.B ENSGT00940000155867 ENSGT00940000161249 ENSGT00940000158225 ENSGT00950000182956.b.b.a.b ENSGT00940000158155 ENSGT00390000003219 ENSGT00940000158804 ENSGT00390000006066 ENSGT00390000005378 ENSGT00940000157200 ENSGT00940000157312.h ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 ENSGT00940000157922 ENSGT00940000153655.B ENSGT00440000033958 Degu MODERN SPECIES 274 ENSODEG00000018801 HMCES (ENSODEG00000002476) ENSODEG00000002503 TSEN2 (ENSODEG00000002629) #19 PPARG (ENSODEG00000002659) #18 ENSODEG00000001988 TIMP4 (ENSODEG00000002023) TAMM41 (ENSODEG00000002076) ENSODEG00000018794 ENSODEG00000002124 ATG7 (ENSODEG00000002299) SLC6A1 (ENSODEG00000002644) SLC6A11 (ENSODEG00000002665) ENSODEG00000002676 MKRN2OS (ENSODEG00000002688) #20 MKRN2 (ENSODEG00000002702) #22 RAF1 (ENSODEG00000002734) #23 TMEM40 (ENSODEG00000002755) CAND2 (ENSODEG00000002821) ENSODEG00000002891 ENSODEG00000002902 IFT122 (ENSODEG00000003013) RHO (ENSODEG00000003304) PLXND1 (ENSODEG00000003347) TMCC1 (ENSODEG00000001710) ENSODEG00000001772 ENSODEG00000001849 ENSODEG00000001861 NR2C2 (ENSODEG00000001892) MRPS25 (ENSODEG00000001966) RBSN (ENSODEG00000001991) Long-tailed chinchilla MODERN SPECIES 136 ACBD7 (ENSCLAG00000010962) RPP38 (ENSCLAG00000010194) NMT2 (ENSCLAG00000008204) FAM171A1 (ENSCLAG00000009809) ENSCLAG00000009091 ENSCLAG00000008194 TEAD4 (ENSCLAG00000012070) TULP3 (ENSCLAG00000017345) RHNO1 (ENSCLAG00000017326) FOXM1 (ENSCLAG00000014183) TEX52 (ENSCLAG00000013429) ITFG2 (ENSCLAG00000016639) FKBP4 (ENSCLAG00000013510) ENSCLAG00000011764 MKRN2OS (ENSCLAG00000009109) #20 MKRN2 (ENSCLAG00000008755) #22 RAF1 (ENSCLAG00000010316) #23 TMEM40 (ENSCLAG00000009668) CAND2 (ENSCLAG00000007541) ENSCLAG00000007426 MBD4 (ENSCLAG00000008974) IFT122 (ENSCLAG00000006170) RHO (ENSCLAG00000006233) PLXND1 (ENSCLAG00000012627) TMCC1 (ENSCLAG00000014727) RBSN (ENSCLAG00000011613) MRPS25 (ENSCLAG00000008381) NR2C2 (ENSCLAG00000011082) FGD5 (ENSCLAG00000011953) C3orf20 (ENSCLAG00000013841) CCDC174 (ENSCLAG00000011014) Naked mole-rat female MODERN SPECIES 27 ENSHGLG00000000350 ENSHGLG00000045274 HRH1 (ENSHGLG00000044045) ENSHGLG00000002369 ENSHGLG00000000122 ENSHGLG00000000094 ENSHGLG00000037886 DNAJB8 (ENSHGLG00000046802) GATA2 (ENSHGLG00000000985) ENSHGLG00000000920 ENSHGLG00000039046 ENSHGLG00000019586 ENSHGLG00000032284 ENSHGLG00000045316 ENSHGLG00000017856 #20 ENSHGLG00000018194 #22 ENSHGLG00000018214 #23 ENSHGLG00000037560 ENSHGLG00000032617 ENSHGLG00000039038 ENSHGLG00000033042 ENSHGLG00000015498 ENSHGLG00000015580 ENSHGLG00000040769 ENSHGLG00000015777 MBD4 (ENSHGLG00000009034) IFT122 (ENSHGLG00000009113) RHO (ENSHGLG00000006668) ENSHGLG00000040416 ENSHGLG00000040044 ENSHGLG00000000240 Sciuridae ANCESTRAL SPECIES 41 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Marmotini ANCESTRAL SPECIES 49 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00960000190360 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Marmotini_b ANCESTRAL SPECIES 62 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00960000190360 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Arctic ground squirrel MODERN SPECIES 23 GHRL (ENSUPAG00010022997) SEC13 (ENSUPAG00010022998) ATP2B2 (ENSUPAG00010022999) SLC6A11 (ENSUPAG00010023004) SLC6A1 (ENSUPAG00010023006) ENSUPAG00010023009 HRH1 (ENSUPAG00010023010) ATG7 (ENSUPAG00010023011) VGLL4 (ENSUPAG00010023024) ENSUPAG00010023027 SYN2 (ENSUPAG00010023028) TIMP4 (ENSUPAG00010023029) PPARG (ENSUPAG00010023031) #18 TSEN2 (ENSUPAG00010023034) #19 MKRN2OS (ENSUPAG00010023035) #20 MKRN2 (ENSUPAG00010023036) #22 RAF1 (ENSUPAG00010023038) #23 TMEM40 (ENSUPAG00010023040) CAND2 (ENSUPAG00010023044) ENSUPAG00010023046 EFCAB12 (ENSUPAG00010023049) ENSUPAG00010023052 ENSUPAG00010023053 IFT122 (ENSUPAG00010023058) RHO (ENSUPAG00010023066) H1-8 (ENSUPAG00010023069) PLXND1 (ENSUPAG00010000023) TMCC1 (ENSUPAG00010000491) TRH (ENSUPAG00010000545) RBSN (ENSUPAG00010000555) MRPS25 (ENSUPAG00010000567) Squirrel MODERN SPECIES 202 TATDN2 (ENSSTOG00000013999) GHRL (ENSSTOG00000022095) SEC13 (ENSSTOG00000014017) ATP2B2 (ENSSTOG00000014026) SLC6A11 (ENSSTOG00000028999) SLC6A1 (ENSSTOG00000007598) HRH1 (ENSSTOG00000015286) ATG7 (ENSSTOG00000015288) VGLL4 (ENSSTOG00000025247) ENSSTOG00000028589 TIMP4 (ENSSTOG00000034531) SYN2 (ENSSTOG00000011519) PPARG (ENSSTOG00000012778) #18 TSEN2 (ENSSTOG00000000538) #19 MKRN2OS (ENSSTOG00000031428) #20 MKRN2 (ENSSTOG00000010520) #22 RAF1 (ENSSTOG00000025146) #23 CAND2 (ENSSTOG00000023136) ENSSTOG00000026505 MBD4 (ENSSTOG00000020663) IFT122 (ENSSTOG00000004353) RHO (ENSSTOG00000028352) PLXND1 (ENSSTOG00000024621) TMCC1 (ENSSTOG00000019869) TRH (ENSSTOG00000026247) RBSN (ENSSTOG00000022986) MRPS25 (ENSSTOG00000030962) NR2C2 (ENSSTOG00000005250) FGD5 (ENSSTOG00000005202) C3orf20 (ENSSTOG00000002907) CCDC174 (ENSSTOG00000027414) Alpin marmot MODERN SPECIES 40 ATP2B2 (ENSMMMG00000009587) SLC6A11 (ENSMMMG00000009836) SLC6A1 (ENSMMMG00000009856) ENSMMMG00000009895 HRH1 (ENSMMMG00000009921) ENSMMMG00000009925 ATG7 (ENSMMMG00000009966) VGLL4 (ENSMMMG00000010304) TAMM41 (ENSMMMG00000010322) SYN2 (ENSMMMG00000010440) ENSMMMG00000010687 PPARG (ENSMMMG00000010840) #18 ENSMMMG00000010899 #19 ENSMMMG00000010907 #19 MKRN2OS (ENSMMMG00000010915) #20 MKRN2 (ENSMMMG00000010927) #22 ENSMMMG00000010950 RAF1 (ENSMMMG00000010957) #23 ENSMMMG00000010993 ENSMMMG00000010997 EFCAB12 (ENSMMMG00000011023) MBD4 (ENSMMMG00000011043) IFT122 (ENSMMMG00000011068) RHO (ENSMMMG00000011272) ENSMMMG00000011299 ENSMMMG00000011319 TMCC1 (ENSMMMG00000011365) TRH (ENSMMMG00000011424) RBSN (ENSMMMG00000011435) MRPS25 (ENSMMMG00000011452) NR2C2 (ENSMMMG00000011464) Eurasian red squirrel MODERN SPECIES 10 GHRL (ENSSVLG00005023970) SEC13 (ENSSVLG00005023877) ATP2B2 (ENSSVLG00005022802) SLC6A11 (ENSSVLG00005022396) SLC6A1 (ENSSVLG00005021844) HRH1 (ENSSVLG00005021749) ATG7 (ENSSVLG00005021683) VGLL4 (ENSSVLG00005021566) ENSSVLG00005021494 TAMM41 (ENSSVLG00005021448) TIMP4 (ENSSVLG00005021374) SYN2 (ENSSVLG00005021130) PPARG (ENSSVLG00005020780) #18 TSEN2 (ENSSVLG00005020543) #19 MKRN2OS (ENSSVLG00005020454) #20 MKRN2 (ENSSVLG00005020340) #22 ENSSVLG00005019978 #23 TMEM40 (ENSSVLG00005019760) CAND2 (ENSSVLG00005019570) ENSSVLG00005019450 EFCAB12 (ENSSVLG00005019404) MBD4 (ENSSVLG00005019308) IFT122 (ENSSVLG00005018941) RHO (ENSSVLG00005018827) ENSSVLG00005018771 PLXND1 (ENSSVLG00005018384) TMCC1 (ENSSVLG00005018250) ENSSVLG00005018231 TRH (ENSSVLG00005018181) RBSN (ENSSVLG00005018031) MRPS25 (ENSSVLG00005017966) Rodentia_B ANCESTRAL SPECIES 26 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Myomorpha ANCESTRAL SPECIES 36 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Muroidea ANCESTRAL SPECIES 37 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Muroidea_A ANCESTRAL SPECIES 4 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00940000153997.b.a.a ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 Cricetidae ANCESTRAL SPECIES 3 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00940000153973.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00940000153997.b.a.a ENSGT00940000155716 ENSGT00940000158282 Cricetinae ANCESTRAL SPECIES 8 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00940000153997.b.a.a ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 144 ENSCGRG00001017251 Ghrl (ENSCGRG00001018358) Sec13 (ENSCGRG00001019327) Atp2b2 (ENSCGRG00001021784) Slc6a11 (ENSCGRG00001000475) Slc6a1 (ENSCGRG00001006244) Hrh1 (ENSCGRG00001015773) Atg7 (ENSCGRG00001017070) Vgll4 (ENSCGRG00001001705) Tamm41 (ENSCGRG00001003506) Syn2 (ENSCGRG00001007902) Timp4 (ENSCGRG00001010158) Pparg (ENSCGRG00001013849) #18 Tsen2 (ENSCGRG00001017681) #19 Mkrn2os (ENSCGRG00001018483) #20 ENSCGRG00001019373 #22 Raf1 (ENSCGRG00001020096) #23 Tmem40 (ENSCGRG00001022432) Cand2 (ENSCGRG00001024197) ENSCGRG00001000039 Efcab12 (ENSCGRG00001000767) Mbd4 (ENSCGRG00001003507) Ift122 (ENSCGRG00001012761) Rho (ENSCGRG00001018161) H1f8 (ENSCGRG00001024504) Plxnd1 (ENSCGRG00001007901) Tmcc1 (ENSCGRG00001016263) Washc2 (ENSCGRG00001019572) Zfand4 (ENSCGRG00001023303) Marchf8 (ENSCGRG00001003616) Alox5 (ENSCGRG00001010128) Chinese hamster chok1gshd MODERN SPECIES 401 Kcnv2 (ENSCGRG00001018140) Pum3 (ENSCGRG00001016402) Rfx3 (ENSCGRG00001021745) Glis3 (ENSCGRG00001014233) Slc1a1 (ENSCGRG00001022336) ENSCGRG00001023585 Spata6l (ENSCGRG00001002881) Plpp6 (ENSCGRG00001012981) Cdc37l1 (ENSCGRG00001000264) AK3 (ENSCGRG00001007296) Rcl1 (ENSCGRG00001013748) Jak2 (ENSCGRG00001015840) Insl6 (ENSCGRG00001020673) Plgrkt (ENSCGRG00001023695) Cd274 (ENSCGRG00001024294) ENSCGRG00001013276 #22 Pdcd1lg2 (ENSCGRG00001015183) Ric1 (ENSCGRG00001016728) Ermp1 (ENSCGRG00001021468) Mlana (ENSCGRG00001024579) 9930021J03Rik (ENSCGRG00001008137) Ranbp6 (ENSCGRG00001012447) Il33 (ENSCGRG00001014000) Trpd52l3 (ENSCGRG00001011832) Uhrf2 (ENSCGRG00001019677) Gldc (ENSCGRG00001023952) Mbl2 (ENSCGRG00001015670) Dkk1 (ENSCGRG00001016431) Prkg1 (ENSCGRG00001023225) Cstf2t (ENSCGRG00001003222) A1cf (ENSCGRG00001017413) Golden Hamster MODERN SPECIES 622 Ghrl (ENSMAUG00000021031) Sec13 (ENSMAUG00000012999) Atp2b2 (ENSMAUG00000009448) Slc6a11 (ENSMAUG00000008311) Slc6a1 (ENSMAUG00000021551) Hrh1 (ENSMAUG00000009874) Atg7 (ENSMAUG00000003276) Vgll4 (ENSMAUG00000011159) Tamm41 (ENSMAUG00000017519) ENSMAUG00000013097 Timp4 (ENSMAUG00000018049) ENSMAUG00000020153 ENSMAUG00000012323 #18 ENSMAUG00000013859 #19 Mkrn2os (ENSMAUG00000010492) #20 Mkrn2 (ENSMAUG00000014200) #22 Raf1 (ENSMAUG00000015447) #23 Tmem40 (ENSMAUG00000015454) Cand2 (ENSMAUG00000005693) ENSMAUG00000020260 Efcab12 (ENSMAUG00000010638) ENSMAUG00000014245 Ift122 (ENSMAUG00000005778) Rho (ENSMAUG00000002081) H1f8 (ENSMAUG00000011359) Plxnd1 (ENSMAUG00000021112) ENSMAUG00000021669 Washc2 (ENSMAUG00000020725) ENSMAUG00000008109 ENSMAUG00000021879 Alox5 (ENSMAUG00000018983) Cricetidae_B ANCESTRAL SPECIES 14 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00940000153997.b.a.a ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 Northern American deer mouse MODERN SPECIES 16 Tatdn2 (ENSPEMG00000000467) Ghrl (ENSPEMG00000001433) Sec13 (ENSPEMG00000009433) Atp2b2 (ENSPEMG00000000259) Slc6a11 (ENSPEMG00000020194) Slc6a1 (ENSPEMG00000011702) Hrh1 (ENSPEMG00000028414) Atg7 (ENSPEMG00000010473) Vgll4 (ENSPEMG00000026845) Tamm41 (ENSPEMG00000017033) Syn2 (ENSPEMG00000016120) Timp4 (ENSPEMG00000026166) Pparg (ENSPEMG00000013545) #18 Tsen2 (ENSPEMG00000013175) #19 Mkrn2os (ENSPEMG00000012076) #20 Mkrn2 (ENSPEMG00000002776) #22 Raf1 (ENSPEMG00000012728) #23 Tmem40 (ENSPEMG00000002944) ENSPEMG00000029699 ENSPEMG00000012965 Efcab12 (ENSPEMG00000012553) Mbd4 (ENSPEMG00000006226) Ift122 (ENSPEMG00000017389) Rho (ENSPEMG00000008463) H1f8 (ENSPEMG00000011381) Plxnd1 (ENSPEMG00000008271) ENSPEMG00000024601 Tmcc1 (ENSPEMG00000000449) Washc2 (ENSPEMG00000017284) Zfand4 (ENSPEMG00000008943) Marchf8 (ENSPEMG00000015311) Prairie vole MODERN SPECIES 84 Sec13 (ENSMOCG00000020249) Atp2b2 (ENSMOCG00000022399) Slc6a11 (ENSMOCG00000010284) Slc6a1 (ENSMOCG00000011689) Hrh1 (ENSMOCG00000009133) ENSMOCG00000016658 Atg7 (ENSMOCG00000009400) Vgll4 (ENSMOCG00000012297) Tamm41 (ENSMOCG00000020960) Syn2 (ENSMOCG00000000368) Timp4 (ENSMOCG00000013297) ENSMOCG00000013854 Pparg (ENSMOCG00000017202) #18 Tsen2 (ENSMOCG00000020824) #19 Mkrn2os (ENSMOCG00000010265) #20 Mkrn2 (ENSMOCG00000015472) #22 Raf1 (ENSMOCG00000012403) #23 Tmem40 (ENSMOCG00000021932) Cand2 (ENSMOCG00000012580) ENSMOCG00000015206 Efcab12 (ENSMOCG00000020496) ENSMOCG00000019929 ENSMOCG00000002466 Ift122 (ENSMOCG00000014549) Rho (ENSMOCG00000022070) H1f8 (ENSMOCG00000005594) Plxnd1 (ENSMOCG00000014026) Tmcc1 (ENSMOCG00000009713) Washc2 (ENSMOCG00000018011) ENSMOCG00000018066 ENSMOCG00000002394 Murinae ANCESTRAL SPECIES 4 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00940000153997.b.a.a ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 Mus ANCESTRAL SPECIES 12 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00940000153997.b.a.a ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 Mus_A ANCESTRAL SPECIES 7 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00940000153997.b.a.a ENSGT00940000155716.g ENSGT00940000155716.h ENSGT00940000158282 Mus_B ANCESTRAL SPECIES 15 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00940000153973.c.a.b.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00940000153997.b.a.a ENSGT00940000155716.g ENSGT00940000155716.h Mouse MODERN SPECIES 15 ENSMUSG00000121578 Ghrl (ENSMUSG00000064177) Sec13 (ENSMUSG00000030298) Atp2b2 (ENSMUSG00000030302) Slc6a11 (ENSMUSG00000030307) Slc6a1 (ENSMUSG00000030310) Hrh1 (ENSMUSG00000053004) Atg7 (ENSMUSG00000030314) Vgll4 (ENSMUSG00000030315) Tamm41 (ENSMUSG00000030316) Syn2 (ENSMUSG00000009394) Timp4 (ENSMUSG00000030317) Pparg (ENSMUSG00000000440) #18 Tsen2 (ENSMUSG00000042389) #19 Mkrn2os (ENSMUSG00000068011) #20 Mkrn2 (ENSMUSG00000000439) #22 Raf1 (ENSMUSG00000000441) #23 Tmem40 (ENSMUSG00000059900) Cand2 (ENSMUSG00000030319) Rpl32 (ENSMUSG00000057841) Efcab12 (ENSMUSG00000030321) Mbd4 (ENSMUSG00000030322) Ift122 (ENSMUSG00000030323) Rho (ENSMUSG00000030324) H1f8 (ENSMUSG00000042279) Plxnd1 (ENSMUSG00000030123) Tmcc1 (ENSMUSG00000030126) Washc2 (ENSMUSG00000024104) Zfand4 (ENSMUSG00000042213) Marchf8 (ENSMUSG00000025702) Alox5 (ENSMUSG00000025701) Mus_C ANCESTRAL SPECIES 18 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00940000153997.b.a.a ENSGT00940000155716.g ENSGT00940000155716.h ENSGT00940000158282 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 3022 Atg7 (ENSMSIG00000031927) ENSMSIG00000031929 ENSMSIG00000031930 ENSMSIG00000031931 Syn2 (ENSMSIG00000031932) ENSMSIG00000031933 Timp4 (ENSMSIG00000031934) Pparg (ENSMSIG00000031935) #18 Tsen2 (ENSMSIG00000031936) #19 Mkrn2os (ENSMSIG00000031937) #20 ENSMSIG00000031938 #22 Raf1 (ENSMSIG00000000188) #23 Tmem40 (ENSMSIG00000000359) Cand2 (ENSMSIG00000000651) Rpl32 (ENSMSIG00000000692) Efcab12 (ENSMSIG00000000741) Mbd4 (ENSMSIG00000000793) Ift122 (ENSMSIG00000000881) Rho (ENSMSIG00000001309) ENSMSIG00000001359 H1f8 (ENSMSIG00000001367) ENSMSIG00000001422 Tmcc1 (ENSMSIG00000001659) ENSMSIG00000001776 Washc2 (ENSMSIG00000001796) Zfand4 (ENSMSIG00000001904) Steppe mouse MODERN SPECIES 2895 ENSMSIG00000001198 Soga3 (ENSMSIG00000001173) 9330159F19Rik (ENSMSIG00000001137) ENSMSIG00000001121 Rnf146 (ENSMSIG00000001088) Rspo3 (ENSMSIG00000001044) ENSMSIG00000001036 ENSMSIG00000001019 Cenpw (ENSMSIG00000000994) ENSMSIG00000000980 ENSMSIG00000000946 #22 Trmt11 (ENSMSIG00000000873) spretus MODERN SPECIES 15 Ghrl (MGP_SPRETEiJ_G0029767) Sec13 (MGP_SPRETEiJ_G0029768) Atp2b2 (MGP_SPRETEiJ_G0029769) Slc6a11 (MGP_SPRETEiJ_G0029770) Slc6a1 (MGP_SPRETEiJ_G0029771) Hrh1 (MGP_SPRETEiJ_G0029772) Atg7 (MGP_SPRETEiJ_G0029773) Vgll4 (MGP_SPRETEiJ_G0029774) Tamm41 (MGP_SPRETEiJ_G0029775) Syn2 (MGP_SPRETEiJ_G0029776) MGP_SPRETEiJ_G0029777 Timp4 (MGP_SPRETEiJ_G0029778) Pparg (MGP_SPRETEiJ_G0029779) #18 Tsen2 (MGP_SPRETEiJ_G0029780) #19 Mkrn2os (MGP_SPRETEiJ_G0029781) #20 Mkrn2 (MGP_SPRETEiJ_G0029782) #22 Raf1 (MGP_SPRETEiJ_G0029783) #23 Tmem40 (MGP_SPRETEiJ_G0029784) Cand2 (MGP_SPRETEiJ_G0029785) MGP_SPRETEiJ_G0029786 Efcab12 (MGP_SPRETEiJ_G0029787) Mbd4 (MGP_SPRETEiJ_G0029788) Ift122 (MGP_SPRETEiJ_G0029789) Rho (MGP_SPRETEiJ_G0029790) H1f8 (MGP_SPRETEiJ_G0029791) Plxnd1 (MGP_SPRETEiJ_G0029792) MGP_SPRETEiJ_G0029793 Washc2 (MGP_SPRETEiJ_G0029794) Zfand4 (MGP_SPRETEiJ_G0029795) MGP_SPRETEiJ_G0029796 Marchf8 (MGP_SPRETEiJ_G0029797) Ryukyu mouse MODERN SPECIES 15 Ghrl (MGP_CAROLIEiJ_G0028739) Sec13 (MGP_CAROLIEiJ_G0028740) Atp2b2 (MGP_CAROLIEiJ_G0028741) Slc6a11 (MGP_CAROLIEiJ_G0028742) Slc6a1 (MGP_CAROLIEiJ_G0028743) Hrh1 (MGP_CAROLIEiJ_G0028744) Atg7 (MGP_CAROLIEiJ_G0028745) Vgll4 (MGP_CAROLIEiJ_G0028746) Tamm41 (MGP_CAROLIEiJ_G0028747) Syn2 (MGP_CAROLIEiJ_G0028748) MGP_CAROLIEiJ_G0028749 Timp4 (MGP_CAROLIEiJ_G0028750) Pparg (MGP_CAROLIEiJ_G0028751) #18 Tsen2 (MGP_CAROLIEiJ_G0028752) #19 Mkrn2os (MGP_CAROLIEiJ_G0028753) #20 Mkrn2 (MGP_CAROLIEiJ_G0028754) #22 Raf1 (MGP_CAROLIEiJ_G0028755) #23 MGP_CAROLIEiJ_G0028756 Cand2 (MGP_CAROLIEiJ_G0028757) MGP_CAROLIEiJ_G0028758 Efcab12 (MGP_CAROLIEiJ_G0028759) Mbd4 (MGP_CAROLIEiJ_G0028760) Ift122 (MGP_CAROLIEiJ_G0028761) Rho (MGP_CAROLIEiJ_G0028762) H1f8 (MGP_CAROLIEiJ_G0028763) Plxnd1 (MGP_CAROLIEiJ_G0028764) Tmcc1 (MGP_CAROLIEiJ_G0028765) Washc2 (MGP_CAROLIEiJ_G0028766) Zfand4 (MGP_CAROLIEiJ_G0028767) MGP_CAROLIEiJ_G0028768 Marchf8 (MGP_CAROLIEiJ_G0028769) Shrew mouse MODERN SPECIES 11 Ghrl (MGP_PahariEiJ_G0022490) Sec13 (MGP_PahariEiJ_G0022491) Atp2b2 (MGP_PahariEiJ_G0022492) Slc6a11 (MGP_PahariEiJ_G0022493) Slc6a1 (MGP_PahariEiJ_G0022494) Hrh1 (MGP_PahariEiJ_G0022495) Atg7 (MGP_PahariEiJ_G0022496) Vgll4 (MGP_PahariEiJ_G0022497) Tamm41 (MGP_PahariEiJ_G0022498) Syn2 (MGP_PahariEiJ_G0022499) MGP_PahariEiJ_G0022500 Timp4 (MGP_PahariEiJ_G0022501) Pparg (MGP_PahariEiJ_G0022502) #18 Tsen2 (MGP_PahariEiJ_G0022503) #19 Mkrn2os (MGP_PahariEiJ_G0022504) #20 Mkrn2 (MGP_PahariEiJ_G0022505) #22 Raf1 (MGP_PahariEiJ_G0022506) #23 Tmem40 (MGP_PahariEiJ_G0022507) Cand2 (MGP_PahariEiJ_G0022508) MGP_PahariEiJ_G0022509 Efcab12 (MGP_PahariEiJ_G0022510) MGP_PahariEiJ_G0022511 Ift122 (MGP_PahariEiJ_G0022512) Rho (MGP_PahariEiJ_G0022513) H1f8 (MGP_PahariEiJ_G0022514) Plxnd1 (MGP_PahariEiJ_G0022515) Tmcc1 (MGP_PahariEiJ_G0022516) Washc2 (MGP_PahariEiJ_G0022517) MGP_PahariEiJ_G0022518 MGP_PahariEiJ_G0022519 Marchf8 (MGP_PahariEiJ_G0022520) Rat MODERN SPECIES 14 Slc6a1 (ENSRNOG00000006527) Hrh1 (ENSRNOG00000007420) LOC120102367 (ENSRNOG00000067090) ENSRNOG00000069624 Atg7 (ENSRNOG00000007486) Vgll4 (ENSRNOG00000007822) Tamm41 (ENSRNOG00000007874) Syn2 (ENSRNOG00000008157) ENSRNOG00000067395 AC128901.1 (ENSRNOG00000028826) ENSRNOG00000069227 Timp4 (ENSRNOG00000007955) Pparg (ENSRNOG00000008839) #18 Tsen2 (ENSRNOG00000060175) #19 Mkrn2os (ENSRNOG00000070957) #20 Mkrn2 (ENSRNOG00000009176) #22 Raf1 (ENSRNOG00000010153) #23 Tmem40 (ENSRNOG00000010430) Cand2 (ENSRNOG00000010473) Rpl32 (ENSRNOG00000010746) Efcab12 (ENSRNOG00000026176) Mbd4 (ENSRNOG00000010919) Ift122 (ENSRNOG00000010952) Rho (ENSRNOG00000011144) H1f8 (ENSRNOG00000025251) Plxnd1 (ENSRNOG00000025209) AABR07061825.2 (ENSRNOG00000059964) Tmcc1 (ENSRNOG00000011614) LOC680385 (ENSRNOG00000011606) Washc2c (ENSRNOG00000011653) Zfand4 (ENSRNOG00000011791) Upper Galilee mountains blind mole rat MODERN SPECIES 1707 Tatdn2 (ENSNGAG00000011523) Ghrl (ENSNGAG00000022045) Sec13 (ENSNGAG00000003425) Atp2b2 (ENSNGAG00000015473) Slc6a11 (ENSNGAG00000013842) Slc6a1 (ENSNGAG00000015663) Hrh1 (ENSNGAG00000021456) ENSNGAG00000003030 Vgll4 (ENSNGAG00000013946) Tamm41 (ENSNGAG00000013592) Syn2 (ENSNGAG00000022266) Timp4 (ENSNGAG00000021746) Pparg (ENSNGAG00000014683) #18 ENSNGAG00000013561 #19 Mkrn2os (ENSNGAG00000019573) #20 Mkrn2 (ENSNGAG00000012579) #22 Raf1 (ENSNGAG00000019548) #23 Tmem40 (ENSNGAG00000021850) Cand2 (ENSNGAG00000024002) ENSNGAG00000024001 Efcab12 (ENSNGAG00000008314) ENSNGAG00000017381 Ift122 (ENSNGAG00000022462) Rho (ENSNGAG00000020656) H1f8 (ENSNGAG00000023630) Plxnd1 (ENSNGAG00000020476) Tmcc1 (ENSNGAG00000010573) Trh (ENSNGAG00000022332) Rbsn (ENSNGAG00000022967) Mrps25 (ENSNGAG00000021861) Nr2c2 (ENSNGAG00000022501) Lesser Egyptian jerboa MODERN SPECIES 45 Sec13 (ENSJJAG00000023600) Atp2b2 (ENSJJAG00000009628) Slc6a11 (ENSJJAG00000008690) Slc6a1 (ENSJJAG00000013717) Hrh1 (ENSJJAG00000012905) Atg7 (ENSJJAG00000021264) Vgll4 (ENSJJAG00000017532) Tamm41 (ENSJJAG00000015841) Timp4 (ENSJJAG00000015654) ENSJJAG00000015072 ENSJJAG00000012036 Pparg (ENSJJAG00000023734) #18 ENSJJAG00000002861 #19 ENSJJAG00000015646 Mkrn2os (ENSJJAG00000022652) #20 Mkrn2 (ENSJJAG00000019765) #22 ENSJJAG00000016961 #23 Tmem40 (ENSJJAG00000009444) Cand2 (ENSJJAG00000018247) ENSJJAG00000021233 ENSJJAG00000016695 Ift122 (ENSJJAG00000020288) Rho (ENSJJAG00000022285) ENSJJAG00000014828 Plxnd1 (ENSJJAG00000014069) ENSJJAG00000020659 Tmcc1 (ENSJJAG00000019999) ENSJJAG00000023012 Rbsn (ENSJJAG00000024360) Mrps25 (ENSJJAG00000013413) Nr2c2 (ENSJJAG00000016580) Kangaroo rat MODERN SPECIES 331 Irak2 (ENSDORG00000012277) Tatdn2 (ENSDORG00000012279) Ghrl (ENSDORG00000012281) Sec13 (ENSDORG00000015327) Atp2b2 (ENSDORG00000015330) Slc6a11 (ENSDORG00000016390) Slc6a1 (ENSDORG00000016380) Atg7 (ENSDORG00000004380) Vgll4 (ENSDORG00000004378) Tamm41 (ENSDORG00000002091) Timp4 (ENSDORG00000009509) ENSDORG00000009507 Pparg (ENSDORG00000003445) #18 Tsen2 (ENSDORG00000003395) #19 Mkrn2os (ENSDORG00000028573) #20 Mkrn2 (ENSDORG00000015621) #22 Raf1 (ENSDORG00000015622) #23 ENSDORG00000023579 Cand2 (ENSDORG00000008424) Rpl32 (ENSDORG00000008426) ENSDORG00000000902 Ift122 (ENSDORG00000000906) Rho (ENSDORG00000000911) ENSDORG00000026967 Plxnd1 (ENSDORG00000000912) Tmcc1 (ENSDORG00000026595) Rbsn (ENSDORG00000009815) Mrps25 (ENSDORG00000026838) Nr2c2 (ENSDORG00000007038) Fgd5 (ENSDORG00000016297) 4930590J08Rik (ENSDORG00000007329) Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183077.a.b #22 Hedgehog MODERN SPECIES 7890 MKRN2 (ENSEEUG00000002217) #22 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT00930000152979 ENSGT00940000175447 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000186178 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 Carnivora ANCESTRAL SPECIES 6 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000009113.a.a.q.a.a ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000186178 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.a.b ENSGT00940000153973.c.a.b.b.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 Caniformia ANCESTRAL SPECIES 4 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000009113.a.a.q.a.a ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000186178 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 Caniformia_b ANCESTRAL SPECIES 16 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000009113.a.a.q.a.a ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000186178 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 Ursidae ANCESTRAL SPECIES 11 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000009113.a.a.q.a.a ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000186178 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.d ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 Ursus ANCESTRAL SPECIES 43 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000009113.a.a.q.a.a ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b.c.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000012138.a.a.j.s.b ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b.d ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 American black bear MODERN SPECIES 4165 ENSUAMG00000023642 MKRN2 (ENSUAMG00000023641) #22 ENSUAMG00000022973 #23 Polar bear MODERN SPECIES 210 TATDN2 (ENSUMAG00000018632) GHRL (ENSUMAG00000018619) SEC13 (ENSUMAG00000018614) ATP2B2 (ENSUMAG00000018280) SLC6A11 (ENSUMAG00000018214) SLC6A1 (ENSUMAG00000017999) HRH1 (ENSUMAG00000017957) ATG7 (ENSUMAG00000017892) VGLL4 (ENSUMAG00000017868) TAMM41 (ENSUMAG00000017859) TIMP4 (ENSUMAG00000017853) SYN2 (ENSUMAG00000017656) PPARG (ENSUMAG00000017617) #18 TSEN2 (ENSUMAG00000017610) #19 MKRN2OS (ENSUMAG00000017608) #20 MKRN2 (ENSUMAG00000017606) #22 RAF1 (ENSUMAG00000017600) #23 TMEM40 (ENSUMAG00000017596) CAND2 (ENSUMAG00000017566) RPL32 (ENSUMAG00000017557) EFCAB12 (ENSUMAG00000017549) ENSUMAG00000017544 MBD4 (ENSUMAG00000017542) IFT122 (ENSUMAG00000017522) RHO (ENSUMAG00000017511) PLXND1 (ENSUMAG00000017372) TMCC1 (ENSUMAG00000017322) TRH (ENSUMAG00000017316) RBSN (ENSUMAG00000017308) MRPS25 (ENSUMAG00000017301) NR2C2 (ENSUMAG00000017295) Giant Panda MODERN SPECIES 14 TATDN2 (ENSAMEG00000016012) GHRL (ENSAMEG00000016009) SEC13 (ENSAMEG00000015994) ATP2B2 (ENSAMEG00000015866) SLC6A11 (ENSAMEG00000013958) SLC6A1 (ENSAMEG00000028234) HRH1 (ENSAMEG00000019211) ATG7 (ENSAMEG00000013130) VGLL4 (ENSAMEG00000011011) TAMM41 (ENSAMEG00000010999) SYN2 (ENSAMEG00000004794) TIMP4 (ENSAMEG00000004836) PPARG (ENSAMEG00000004774) #18 TSEN2 (ENSAMEG00000004748) #19 MKRN2OS (ENSAMEG00000004745) #20 MKRN2 (ENSAMEG00000004720) #22 RAF1 (ENSAMEG00000004650) #23 ENSAMEG00000025362 TMEM40 (ENSAMEG00000004646) CAND2 (ENSAMEG00000004596) RPL32 (ENSAMEG00000004583) ENSAMEG00000004574 MBD4 (ENSAMEG00000004562) ENSAMEG00000030948 IFT122 (ENSAMEG00000004471) RHO (ENSAMEG00000004453) H1-8 (ENSAMEG00000004448) PLXND1 (ENSAMEG00000004387) TMCC1 (ENSAMEG00000004384) TRH (ENSAMEG00000025033) ENSAMEG00000004361 Mustelinae ANCESTRAL SPECIES 18 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000186178 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 American mink MODERN SPECIES 287 SYN2 (ENSNVIG00000008362) ENSNVIG00000008402 TIMP4 (ENSNVIG00000008416) PPARG (ENSNVIG00000008444) #18 TSEN2 (ENSNVIG00000008550) #19 MKRN2OS (ENSNVIG00000008607) #20 MKRN2 (ENSNVIG00000008629) #22 RAF1 (ENSNVIG00000008700) #23 ENSNVIG00000008812 TMEM40 (ENSNVIG00000008852) CAND2 (ENSNVIG00000008985) ENSNVIG00000009040 EFCAB12 (ENSNVIG00000009088) MBD4 (ENSNVIG00000009126) IFT122 (ENSNVIG00000009217) RHO (ENSNVIG00000009693) H1-8 (ENSNVIG00000009706) PLXND1 (ENSNVIG00000009720) TMCC1 (ENSNVIG00000009775) TRH (ENSNVIG00000009787) RBSN (ENSNVIG00000009795) MRPS25 (ENSNVIG00000009805) Ferret MODERN SPECIES 163 TATDN2 (ENSMPUG00000017160) SEC13 (ENSMPUG00000017161) ATP2B2 (ENSMPUG00000017163) ENSMPUG00000017167 SLC6A11 (ENSMPUG00000017168) SLC6A1 (ENSMPUG00000017170) HRH1 (ENSMPUG00000020115) ATG7 (ENSMPUG00000017171) VGLL4 (ENSMPUG00000017174) TAMM41 (ENSMPUG00000017175) SYN2 (ENSMPUG00000017176) TIMP4 (ENSMPUG00000017178) PPARG (ENSMPUG00000017181) #18 TSEN2 (ENSMPUG00000017182) #19 MKRN2OS (ENSMPUG00000017183) #20 MKRN2 (ENSMPUG00000017184) #22 RAF1 (ENSMPUG00000017185) #23 TMEM40 (ENSMPUG00000017187) CAND2 (ENSMPUG00000017188) ENSMPUG00000017189 EFCAB12 (ENSMPUG00000017190) MBD4 (ENSMPUG00000017195) IFT122 (ENSMPUG00000017197) RHO (ENSMPUG00000017225) ENSMPUG00000017237 PLXND1 (ENSMPUG00000017238) ENSMPUG00000017241 TMCC1 (ENSMPUG00000017243) TRH (ENSMPUG00000017246) RBSN (ENSMPUG00000017247) MRPS25 (ENSMPUG00000017248) Canidae ANCESTRAL SPECIES ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00940000162517.e.b.b ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.a.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Canis_lupus ANCESTRAL SPECIES 1 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00940000162517.e.b.b ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.a.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00950000183087.A.a.a.b.p.a.a ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 Dingo MODERN SPECIES 236 SEC13 (ENSCAFG00020008342) ATP2B2 (ENSCAFG00020007890) SLC6A11 (ENSCAFG00020007842) SLC6A1 (ENSCAFG00020007634) HRH1 (ENSCAFG00020007622) ATG7 (ENSCAFG00020007592) VGLL4 (ENSCAFG00020007573) ENSCAFG00020007566 TAMM41 (ENSCAFG00020007562) TIMP4 (ENSCAFG00020007541) SYN2 (ENSCAFG00020007281) PPARG (ENSCAFG00020007261) #18 TSEN2 (ENSCAFG00020007250) #19 MKRN2OS (ENSCAFG00020007247) #20 ENSCAFG00020007244 MKRN2 (ENSCAFG00020007243) #22 RAF1 (ENSCAFG00020007230) #23 TMEM40 (ENSCAFG00020007225) CAND2 (ENSCAFG00020007135) RPL32 (ENSCAFG00020007109) EFCAB12 (ENSCAFG00020007096) MBD4 (ENSCAFG00020007082) IFT122 (ENSCAFG00020006537) RHO (ENSCAFG00020006492) H1-8 (ENSCAFG00020006486) PLXND1 (ENSCAFG00020006389) ENSCAFG00020006372 ENSCAFG00020006362 ENSCAFG00020006358 ENSCAFG00020006352 TRH (ENSCAFG00020006350) Dog MODERN SPECIES 12 SEC13 (ENSCAFG00845007748) ATP2B2 (ENSCAFG00845007221) SLC6A11 (ENSCAFG00845006781) SLC6A1 (ENSCAFG00845006668) HRH1 (ENSCAFG00845006605) ATG7 (ENSCAFG00845006288) VGLL4 (ENSCAFG00845006044) ENSCAFG00845005976 TAMM41 (ENSCAFG00845005937) TIMP4 (ENSCAFG00845029189) SYN2 (ENSCAFG00845029109) PPARG (ENSCAFG00845029007) #18 TSEN2 (ENSCAFG00845028923) #19 MKRN2OS (ENSCAFG00845028857) #20 ENSCAFG00845028837 MKRN2 (ENSCAFG00845028765) #22 ENSCAFG00845028720 RAF1 (ENSCAFG00845028676) #23 TMEM40 (ENSCAFG00845028589) CAND2 (ENSCAFG00845028524) RPL32 (ENSCAFG00845028446) ENSCAFG00845028379 MBD4 (ENSCAFG00845028304) IFT122 (ENSCAFG00845027707) RHO (ENSCAFG00845027581) H1-8 (ENSCAFG00845027541) PLXND1 (ENSCAFG00845026992) RPL26 (ENSCAFG00845026761) TMCC1 (ENSCAFG00845026698) ENSCAFG00845026667 TRH (ENSCAFG00845026628) Red fox MODERN SPECIES 130 HRH1 (ENSVVUG00000015819) ATG7 (ENSVVUG00000015693) VGLL4 (ENSVVUG00000015675) ENSVVUG00000015670 TAMM41 (ENSVVUG00000015667) ENSVVUG00000015666 TIMP4 (ENSVVUG00000015655) SYN2 (ENSVVUG00000015294) ENSVVUG00000015270 PPARG (ENSVVUG00000015266) #18 TSEN2 (ENSVVUG00000015253) #19 ENSVVUG00000015251 #20 ENSVVUG00000015247 ENSVVUG00000015244 ENSVVUG00000015242 MKRN2 (ENSVVUG00000015240) #22 RAF1 (ENSVVUG00000015233) #23 ENSVVUG00000015228 CAND2 (ENSVVUG00000014272) RPL32 (ENSVVUG00000014231) EFCAB12 (ENSVVUG00000014226) MBD4 (ENSVVUG00000014222) IFT122 (ENSVVUG00000014184) RHO (ENSVVUG00000014149) H1-8 (ENSVVUG00000014145) PLXND1 (ENSVVUG00000013916) TMCC1 (ENSVVUG00000013886) TRH (ENSVVUG00000013865) RBSN (ENSVVUG00000013853) MRPS25 (ENSVVUG00000013846) ENSVVUG00000013842 Felidae ANCESTRAL SPECIES 17 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000009113.a.a.q.a.a ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Cat MODERN SPECIES 1 GHRL (ENSFCAG00000011244) SEC13 (ENSFCAG00000011245) ATP2B2 (ENSFCAG00000011247) SLC6A11 (ENSFCAG00000006043) SLC6A1 (ENSFCAG00000004345) HRH1 (ENSFCAG00000034897) ATG7 (ENSFCAG00000003263) VGLL4 (ENSFCAG00000003266) TAMM41 (ENSFCAG00000030835) SYN2 (ENSFCAG00000006229) TIMP4 (ENSFCAG00000028966) PPARG (ENSFCAG00000006231) #18 TSEN2 (ENSFCAG00000025500) #19 MKRN2OS (ENSFCAG00000046813) #20 ENSFCAG00000049119 MKRN2 (ENSFCAG00000007979) #22 RAF1 (ENSFCAG00000026299) #23 TMEM40 (ENSFCAG00000037003) ENSFCAG00000052196 CAND2 (ENSFCAG00000008340) RPL32 (ENSFCAG00000030450) EFCAB12 (ENSFCAG00000000081) MBD4 (ENSFCAG00000000083) IFT122 (ENSFCAG00000000086) RHO (ENSFCAG00000000092) H1-8 (ENSFCAG00000000094) PLXND1 (ENSFCAG00000000095) TMCC1 (ENSFCAG00000027586) TRH (ENSFCAG00000029423) RBSN (ENSFCAG00000025901) MRPS25 (ENSFCAG00000027687) Panthera ANCESTRAL SPECIES 1 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000009113.a.a.q.a.a ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Tiger MODERN SPECIES 57 TATDN2 (ENSPTIG00000021381) GHRL (ENSPTIG00000020903) SEC13 (ENSPTIG00000019088) ATP2B2 (ENSPTIG00000016845) SLC6A11 (ENSPTIG00000016056) SLC6A1 (ENSPTIG00000015454) HRH1 (ENSPTIG00000005327) ATG7 (ENSPTIG00000012782) VGLL4 (ENSPTIG00000011766) TAMM41 (ENSPTIG00000009439) TIMP4 (ENSPTIG00000009274) SYN2 (ENSPTIG00000005386) PPARG (ENSPTIG00000021339) #18 TSEN2 (ENSPTIG00000021018) #19 MKRN2OS (ENSPTIG00000020689) #20 MKRN2 (ENSPTIG00000020261) #22 RAF1 (ENSPTIG00000019431) #23 TMEM40 (ENSPTIG00000016867) CAND2 (ENSPTIG00000014551) RPL32 (ENSPTIG00000013290) EFCAB12 (ENSPTIG00000012496) ENSPTIG00000012068 IFT122 (ENSPTIG00000017825) RHO (ENSPTIG00000016846) H1-8 (ENSPTIG00000016687) ENSPTIG00000016640 ENSPTIG00000016501 Panthera_a ANCESTRAL SPECIES ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000009113.a.a.q.a.a ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 lion MODERN SPECIES 2 GHRL (ENSPLOG00000000147) SEC13 (ENSPLOG00000000172) ATP2B2 (ENSPLOG00000000482) SLC6A11 (ENSPLOG00000000895) SLC6A1 (ENSPLOG00000001048) HRH1 (ENSPLOG00000001150) ATG7 (ENSPLOG00000001203) ENSPLOG00000001305 VGLL4 (ENSPLOG00000001346) TAMM41 (ENSPLOG00000001396) SYN2 (ENSPLOG00000001422) TIMP4 (ENSPLOG00000001454) PPARG (ENSPLOG00000001496) #18 TSEN2 (ENSPLOG00000001594) #19 MKRN2OS (ENSPLOG00000001659) #20 MKRN2 (ENSPLOG00000001691) #22 RAF1 (ENSPLOG00000001743) #23 TMEM40 (ENSPLOG00000001779) CAND2 (ENSPLOG00000001847) RPL32 (ENSPLOG00000001870) EFCAB12 (ENSPLOG00000001903) MBD4 (ENSPLOG00000002021) IFT122 (ENSPLOG00000002159) RHO (ENSPLOG00000002405) H1-8 (ENSPLOG00000002423) PLXND1 (ENSPLOG00000002460) TMCC1 (ENSPLOG00000002518) TRH (ENSPLOG00000002548) RBSN (ENSPLOG00000002563) MRPS25 (ENSPLOG00000002725) NR2C2 (ENSPLOG00000002757) leopard MODERN SPECIES 154 MKRN2OS (ENSPPRG00000021987) #20 MKRN2 (ENSPPRG00000021887) #22 RAF1 (ENSPPRG00000021390) #23 TMEM40 (ENSPPRG00000018566) CAND2 (ENSPPRG00000017246) RPL32 (ENSPPRG00000016964) EFCAB12 (ENSPPRG00000016816) MBD4 (ENSPPRG00000016480) IFT122 (ENSPPRG00000015865) ENSPPRG00000014504 RHO (ENSPPRG00000014471) H1-8 (ENSPPRG00000014444) PLXND1 (ENSPPRG00000014283) TMCC1 (ENSPPRG00000014113) TRH (ENSPPRG00000013952) RBSN (ENSPPRG00000013941) MRPS25 (ENSPPRG00000013901) Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000186178 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.d ENSGT00940000153973.c.a.b.b.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 Equus ANCESTRAL SPECIES 5 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT01030000235208 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084.ab.a.b #23 ENSGT00950000186178 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.d ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Horse MODERN SPECIES 7 ATP2B2 (ENSECAG00000023528) SLC6A11 (ENSECAG00000004220) SLC6A1 (ENSECAG00000000699) HRH1 (ENSECAG00000004544) ENSECAG00000057850 ENSECAG00000048096 ATG7 (ENSECAG00000022756) VGLL4 (ENSECAG00000039947) TAMM41 (ENSECAG00000013860) TIMP4 (ENSECAG00000011609) SYN2 (ENSECAG00000049642) PPARG (ENSECAG00000016664) #18 ENSECAG00000039510 TSEN2 (ENSECAG00000012813) #19 MKRN2OS (ENSECAG00000012416) MKRN2 (ENSECAG00000024404) #22 RAF1 (ENSECAG00000011807) #23 ENSECAG00000033555 TMEM40 (ENSECAG00000008940) RPL32 (ENSECAG00000049946) CAND2 (ENSECAG00000010515) MBD4 (ENSECAG00000022106) IFT122 (ENSECAG00000015360) RHO (ENSECAG00000013709) H1-8 (ENSECAG00000013614) PLXND1 (ENSECAG00000009159) TMCC1 (ENSECAG00000006725) TRH (ENSECAG00000006178) RBSN (ENSECAG00000021486) MRPS25 (ENSECAG00000020841) NR2C2 (ENSECAG00000003791) Donkey MODERN SPECIES 13 ATP2B2 (ENSEASG00005014293) ENSEASG00005034257 SLC6A11 (ENSEASG00005014295) SLC6A1 (ENSEASG00005014296) HRH1 (ENSEASG00005025266) ATG7 (ENSEASG00005014298) ENSEASG00005027051 VGLL4 (ENSEASG00005014301) TAMM41 (ENSEASG00005014302) SYN2 (ENSEASG00005014311) TIMP4 (ENSEASG00005030754) PPARG (ENSEASG00005014732) #18 TSEN2 (ENSEASG00005014763) #19 ENSEASG00005014772 MKRN2OS (ENSEASG00005035083) #20 MKRN2 (ENSEASG00005014776) #22 ENSEASG00005014777 #23 TMEM40 (ENSEASG00005033260) ENSEASG00005025405 CAND2 (ENSEASG00005014788) ENSEASG00005014792 MBD4 (ENSEASG00005014800) IFT122 (ENSEASG00005014840) RHO (ENSEASG00005015347) H1-8 (ENSEASG00005025925) PLXND1 (ENSEASG00005015351) TMCC1 (ENSEASG00005015373) ENSEASG00005015376 ENSEASG00005015384 ENSEASG00005015419 NR2C2 (ENSEASG00005015422) Chiroptera ANCESTRAL SPECIES 54 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Megabat MODERN SPECIES 1499 TSEN2 (ENSPVAG00000005820) #19 MKRN2 (ENSPVAG00000005822) #22 RAF1 (ENSPVAG00000005823) #23 TMEM40 (ENSPVAG00000005825) CAND2 (ENSPVAG00000005826) Microchiroptera ANCESTRAL SPECIES 16 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Greater horseshoe bat MODERN SPECIES 8 TATDN2 (ENSRFEG00010010704) ENSRFEG00010010629 ENSRFEG00010010425 ATP2B2 (ENSRFEG00010019414) SLC6A11 (ENSRFEG00010019331) SLC6A1 (ENSRFEG00010019187) HRH1 (ENSRFEG00010019159) ATG7 (ENSRFEG00010019096) VGLL4 (ENSRFEG00010019005) TAMM41 (ENSRFEG00010018912) TIMP4 (ENSRFEG00010018875) SYN2 (ENSRFEG00010018840) PPARG (ENSRFEG00010018692) #18 TSEN2 (ENSRFEG00010018592) #19 MKRN2OS (ENSRFEG00010018565) #20 MKRN2 (ENSRFEG00010018469) #22 RAF1 (ENSRFEG00010018423) #23 TMEM40 (ENSRFEG00010018278) CAND2 (ENSRFEG00010018212) RPL32 (ENSRFEG00010018162) EFCAB12 (ENSRFEG00010018070) MBD4 (ENSRFEG00010018007) IFT122 (ENSRFEG00010017745) RHO (ENSRFEG00010017659) PLXND1 (ENSRFEG00010017592) TMCC1 (ENSRFEG00010017473) ENSRFEG00010017442 TRH (ENSRFEG00010017403) RBSN (ENSRFEG00010017337) MRPS25 (ENSRFEG00010017280) ENSRFEG00010017258 Microbat MODERN SPECIES 945 TATDN2 (ENSMLUG00000004584) GHRL (ENSMLUG00000012014) SEC13 (ENSMLUG00000004901) ATP2B2 (ENSMLUG00000001467) ENSMLUG00000009590 SLC6A1 (ENSMLUG00000002027) HRH1 (ENSMLUG00000010552) ATG7 (ENSMLUG00000010572) VGLL4 (ENSMLUG00000010597) TAMM41 (ENSMLUG00000015063) TIMP4 (ENSMLUG00000006263) SYN2 (ENSMLUG00000006253) PPARG (ENSMLUG00000017638) #18 TSEN2 (ENSMLUG00000017641) #19 MKRN2OS (ENSMLUG00000024734) #20 MKRN2 (ENSMLUG00000017643) #22 RAF1 (ENSMLUG00000017645) #23 TMEM40 (ENSMLUG00000002835) CAND2 (ENSMLUG00000006333) RPL32 (ENSMLUG00000022528) ENSMLUG00000014759 MBD4 (ENSMLUG00000014766) IFT122 (ENSMLUG00000014771) RHO (ENSMLUG00000014786) ENSMLUG00000025226 PLXND1 (ENSMLUG00000014790) TMCC1 (ENSMLUG00000016755) TRH (ENSMLUG00000007249) RBSN (ENSMLUG00000010088) ENSMLUG00000017504 NR2C2 (ENSMLUG00000010062) Artiodactyla ANCESTRAL SPECIES 2 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.d ENSGT00940000153973.c.a.b.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT01010000229800 ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 Artiodactyla_a ANCESTRAL SPECIES 18 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT01010000229800 ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT00940000175447 ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 Camelidae ANCESTRAL SPECIES 7 ENSGT00940000155616.c.a.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000175447 ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 Arabian camel MODERN SPECIES 8 TATDN2 (ENSCDRG00005015003) GHRL (ENSCDRG00005015107) SEC13 (ENSCDRG00005015206) ATP2B2 (ENSCDRG00005015469) SLC6A11 (ENSCDRG00005015983) SLC6A1 (ENSCDRG00005016134) HRH1 (ENSCDRG00005016405) ATG7 (ENSCDRG00005016438) VGLL4 (ENSCDRG00005016647) TAMM41 (ENSCDRG00005016988) SYN2 (ENSCDRG00005017059) TIMP4 (ENSCDRG00005017087) PPARG (ENSCDRG00005017141) #18 TSEN2 (ENSCDRG00005017293) #19 MKRN2OS (ENSCDRG00005017382) #20 MKRN2 (ENSCDRG00005017406) #22 RAF1 (ENSCDRG00005017576) #23 TMEM40 (ENSCDRG00005017673) CAND2 (ENSCDRG00005017872) ENSCDRG00005018038 EFCAB12 (ENSCDRG00005018119) MBD4 (ENSCDRG00005018206) IFT122 (ENSCDRG00005018267) RHO (ENSCDRG00005018442) ENSCDRG00005018477 ENSCDRG00005018504 ENSCDRG00005018533 PLXND1 (ENSCDRG00005018551) TMCC1 (ENSCDRG00005018594) TRH (ENSCDRG00005003364) RBSN (ENSCDRG00005003390) Alpaca MODERN SPECIES 1304 ENSVPAG00000011052 TIMP4 (ENSVPAG00000011058) PPARG (ENSVPAG00000011059) #18 ENSVPAG00000011061 #19 MKRN2 (ENSVPAG00000011064) #22 RAF1 (ENSVPAG00000011066) #23 TMEM40 (ENSVPAG00000011071) Artiodactyla_b ANCESTRAL SPECIES 21 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT01010000229800 ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT00930000152979 ENSGT00940000175447 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 Pecora ANCESTRAL SPECIES 17 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Yarkand deer MODERN SPECIES 16 XPC (ENSCHYG00000023838) LSM3 (ENSCHYG00000023916) SLC6A6 (ENSCHYG00000023942) GRIP2 (ENSCHYG00000024067) ENSCHYG00000024372 C3orf20 (ENSCHYG00000024531) FGD5 (ENSCHYG00000024639) NR2C2 (ENSCHYG00000024864) ENSCHYG00000025047 RBSN (ENSCHYG00000025089) ENSCHYG00000025128 TIMP4 (ENSCHYG00000025170) PPARG (ENSCHYG00000025198) #18 TSEN2 (ENSCHYG00000025333) #19 MKRN2OS (ENSCHYG00000025406) #20 MKRN2 (ENSCHYG00000025428) #22 RAF1 (ENSCHYG00000025496) #23 ENSCHYG00000013805 TMEM40 (ENSCHYG00000013848) CAND2 (ENSCHYG00000014141) ENSCHYG00000014472 ENSCHYG00000014488 EFCAB12 (ENSCHYG00000014606) MBD4 (ENSCHYG00000014755) IFT122 (ENSCHYG00000015047) RHO (ENSCHYG00000017188) H1-8 (ENSCHYG00000017241) ENSCHYG00000017294 TMCC1 (ENSCHYG00000017484) TRH (ENSCHYG00000017738) TAMM41 (ENSCHYG00000017796) Percora_a ANCESTRAL SPECIES 19 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Siberian musk deer MODERN SPECIES 1221 TMEM42 (ENSMMSG00000018480) ENSMMSG00000018446 SEC13 (ENSMMSG00000018353) ATP2B2 (ENSMMSG00000015764) SLC6A11 (ENSMMSG00000015601) SLC6A1 (ENSMMSG00000015486) HRH1 (ENSMMSG00000015454) ATG7 (ENSMMSG00000015338) VGLL4 (ENSMMSG00000015264) TAMM41 (ENSMMSG00000015235) TIMP4 (ENSMMSG00000015209) SYN2 (ENSMMSG00000015141) PPARG (ENSMMSG00000015004) #18 TSEN2 (ENSMMSG00000014963) #19 MKRN2OS (ENSMMSG00000014926) #20 MKRN2 (ENSMMSG00000014895) #22 RAF1 (ENSMMSG00000024157) #23 TMEM40 (ENSMMSG00000024144) CAND2 (ENSMMSG00000024132) RPL32 (ENSMMSG00000024124) EFCAB12 (ENSMMSG00000024116) MBD4 (ENSMMSG00000024114) IFT122 (ENSMMSG00000024092) RHO (ENSMMSG00000024086) ENSMMSG00000024082 PLXND1 (ENSMMSG00000024073) TMCC1 (ENSMMSG00000024064) ENSMMSG00000024063 TRH (ENSMMSG00000024061) RBSN (ENSMMSG00000024056) MRPS25 (ENSMMSG00000024052) Bovidae ANCESTRAL SPECIES 19 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 ENSGT00440000033958 ENSGT00940000153655.B ENSGT00940000157922 ENSGT00940000158393 ENSGT00640000091558 ENSGT00390000007159 ENSGT00390000000616.l ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000000616.k ENSGT00390000003282.B ENSGT00390000017509 Caprinae ANCESTRAL SPECIES 15 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 ENSGT00440000033958 ENSGT00940000153655.B ENSGT00940000157922 ENSGT00940000158393 ENSGT00640000091558 ENSGT00390000007159 ENSGT00390000000616.l ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000000616.k ENSGT00390000003282.B ENSGT00390000017509 Rambouillet Sheep MODERN SPECIES 10 CHCHD4 (ENSOARG00020025962) TMEM43 (ENSOARG00020025957) ENSOARG00020025950 SLC6A6 (ENSOARG00020025943) GRIP2 (ENSOARG00020025919) CCDC174 (ENSOARG00020025904) C3orf20 (ENSOARG00020025893) NR2C2 (ENSOARG00020025878) MRPS25 (ENSOARG00020025871) RBSN (ENSOARG00020025862) ENSOARG00020025856 SYN2 (ENSOARG00020025846) PPARG (ENSOARG00020025834) #18 TSEN2 (ENSOARG00020025828) #19 MKRN2OS (ENSOARG00020025824) #20 MKRN2 (ENSOARG00020025818) #22 RAF1 (ENSOARG00020025810) #23 TMEM40 (ENSOARG00020025803) CAND2 (ENSOARG00020025794) RPL32 (ENSOARG00020025785) EFCAB12 (ENSOARG00020025775) MBD4 (ENSOARG00020025769) IFT122 (ENSOARG00020025765) RHO (ENSOARG00020025763) ENSOARG00020025760 PLXND1 (ENSOARG00020025735) TMCC1 (ENSOARG00020025721) TRH (ENSOARG00020025716) TAMM41 (ENSOARG00020025710) ENSOARG00020025707 VGLL4 (ENSOARG00020025701) Goat MODERN SPECIES 14 LSM3 (ENSCHIG00000024650) SLC6A6 (ENSCHIG00000024785) GRIP2 (ENSCHIG00000016620) CCDC174 (ENSCHIG00000008286) C3orf20 (ENSCHIG00000009719) FGD5 (ENSCHIG00000023792) NR2C2 (ENSCHIG00000008676) MRPS25 (ENSCHIG00000009931) RBSN (ENSCHIG00000019361) ENSCHIG00000027078 TIMP4 (ENSCHIG00000017995) SYN2 (ENSCHIG00000024912) PPARG (ENSCHIG00000015877) #18 TSEN2 (ENSCHIG00000013772) #19 MKRN2OS (ENSCHIG00000013445) #20 MKRN2 (ENSCHIG00000021098) #22 RAF1 (ENSCHIG00000006954) #23 CAND2 (ENSCHIG00000017799) RPL32 (ENSCHIG00000011099) EFCAB12 (ENSCHIG00000024180) MBD4 (ENSCHIG00000009760) IFT122 (ENSCHIG00000018009) RHO (ENSCHIG00000019086) H1-8 (ENSCHIG00000015286) PLXND1 (ENSCHIG00000008763) ENSCHIG00000016746 ENSCHIG00000015861 TRH (ENSCHIG00000025325) ENSCHIG00000002443 VGLL4 (ENSCHIG00000019976) ATG7 (ENSCHIG00000018813) Bovinae ANCESTRAL SPECIES 16 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 ENSGT00440000033958 ENSGT00940000153655.B ENSGT00940000157922 ENSGT00940000158393 ENSGT00640000091558 ENSGT00390000007159 ENSGT00390000000616.l ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000000616.k Bos ANCESTRAL SPECIES 16 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 ENSGT00440000033958 ENSGT00940000153655.B ENSGT00940000157922 ENSGT00940000158393 ENSGT00640000091558 ENSGT00390000007159 ENSGT00390000000616.l ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000000616.k Bos_a ANCESTRAL SPECIES 9 ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 ENSGT00440000033958 ENSGT00940000153655.B ENSGT00940000157922 ENSGT00940000158393 ENSGT00640000091558 ENSGT00390000007159 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000000616.k ENSGT00390000003282.B Wild yak MODERN SPECIES 1473 ENSBMUG00000011252 SYN2 (ENSBMUG00000011214) PPARG (ENSBMUG00000011177) #18 MKRN2OS (ENSBMUG00000011070) #20 MKRN2 (ENSBMUG00000011049) #22 RAF1 (ENSBMUG00000011029) #23 ENSBMUG00000010983 TMEM40 (ENSBMUG00000010953) CAND2 (ENSBMUG00000010855) RPL32 (ENSBMUG00000010768) EFCAB12 (ENSBMUG00000010745) MBD4 (ENSBMUG00000010711) IFT122 (ENSBMUG00000010042) RHO (ENSBMUG00000009767) ENSBMUG00000009729 ENSBMUG00000009719 TMCC1 (ENSBMUG00000009638) ENSBMUG00000009609 TRH (ENSBMUG00000009602) Domestic yak MODERN SPECIES 14 TMEM43 (ENSBGRG00000018668) XPC (ENSBGRG00000018846) ENSBGRG00000019432 SLC6A6 (ENSBGRG00000019545) GRIP2 (ENSBGRG00000020144) CCDC174 (ENSBGRG00000021048) C3orf20 (ENSBGRG00000021321) FGD5 (ENSBGRG00000021386) NR2C2 (ENSBGRG00000021614) MRPS25 (ENSBGRG00000021676) RBSN (ENSBGRG00000021762) SYN2 (ENSBGRG00000021920) TIMP4 (ENSBGRG00000022226) ENSBGRG00000022315 #18 MKRN2OS (ENSBGRG00000022696) #20 MKRN2 (ENSBGRG00000022735) #22 RAF1 (ENSBGRG00000022891) #23 TMEM40 (ENSBGRG00000023210) CAND2 (ENSBGRG00000023333) RPL32 (ENSBGRG00000023548) EFCAB12 (ENSBGRG00000023675) MBD4 (ENSBGRG00000023851) IFT122 (ENSBGRG00000023990) RHO (ENSBGRG00000024373) ENSBGRG00000024409 ENSBGRG00000024437 ENSBGRG00000024462 TMCC1 (ENSBGRG00000024493) ENSBGRG00000024583 TRH (ENSBGRG00000024598) TAMM41 (ENSBGRG00000024630) Bos_b ANCESTRAL SPECIES 17 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 ENSGT00440000033958 ENSGT00940000153655.B ENSGT00940000157922 ENSGT00940000158393 ENSGT00640000091558 ENSGT00390000007159 ENSGT00390000000616.l ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.d ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000000616.k ENSGT00390000003282.B ENSGT00390000017509 Hybrid Bos Indicus MODERN SPECIES 14 LSM3 (ENSBIXG00005027836) SLC6A6 (ENSBIXG00005027782) GRIP2 (ENSBIXG00005027668) ENSBIXG00005027488 ENSBIXG00005027475 CCDC174 (ENSBIXG00005027454) C3orf20 (ENSBIXG00005027421) FGD5 (ENSBIXG00005027347) NR2C2 (ENSBIXG00005026766) MRPS25 (ENSBIXG00005026733) RBSN (ENSBIXG00005026693) SYN2 (ENSBIXG00005026582) TIMP4 (ENSBIXG00005026516) ENSBIXG00005026465 #18 MKRN2OS (ENSBIXG00005026155) #20 MKRN2 (ENSBIXG00005026143) #22 RAF1 (ENSBIXG00005004450) #23 TMEM40 (ENSBIXG00005026020) CAND2 (ENSBIXG00005025955) RPL32 (ENSBIXG00005025898) MBD4 (ENSBIXG00005025831) IFT122 (ENSBIXG00005025735) RHO (ENSBIXG00005025616) ENSBIXG00005025593 PLXND1 (ENSBIXG00005025560) TMCC1 (ENSBIXG00005025216) ENSBIXG00005025137 ENSBIXG00005025108 TRH (ENSBIXG00005025098) ENSBIXG00005025048 ATG7 (ENSBIXG00005024877) Cow MODERN SPECIES 14 LSM3 (ENSBTAG00000007363) SLC6A6 (ENSBTAG00000011088) GRIP2 (ENSBTAG00000011896) CCDC174 (ENSBTAG00000038298) C22H3orf20 (ENSBTAG00000040133) FGD5 (ENSBTAG00000006789) NR2C2 (ENSBTAG00000013716) MRPS25 (ENSBTAG00000013723) RBSN (ENSBTAG00000013725) ENSBTAG00000031115 TIMP4 (ENSBTAG00000020263) SYN2 (ENSBTAG00000020260) PPARG (ENSBTAG00000001333) #18 TSEN2 (ENSBTAG00000037980) #19 MKRN2OS (ENSBTAG00000024991) #20 MKRN2 (ENSBTAG00000004512) #22 RAF1 (ENSBTAG00000045748) #23 TMEM40 (ENSBTAG00000000161) CAND2 (ENSBTAG00000015273) RPL32 (ENSBTAG00000015283) EFCAB12 (ENSBTAG00000021643) MBD4 (ENSBTAG00000021645) IFT122 (ENSBTAG00000019121) RHO (ENSBTAG00000001310) H1-8 (ENSBTAG00000001812) PLXND1 (ENSBTAG00000001814) TMCC1 (ENSBTAG00000006614) TRH (ENSBTAG00000005306) TAMM41 (ENSBTAG00000003328) VGLL4 (ENSBTAG00000018600) ATG7 (ENSBTAG00000035827) American bison MODERN SPECIES 3340 TMEM43 (ENSBBBG00000010956) XPC (ENSBBBG00000001954) LSM3 (ENSBBBG00000007967) SLC6A6 (ENSBBBG00000010987) GRIP2 (ENSBBBG00000011088) CCDC174 (ENSBBBG00000002003) C3orf20 (ENSBBBG00000011153) NR2C2 (ENSBBBG00000011226) MRPS25 (ENSBBBG00000011234) RBSN (ENSBBBG00000011250) TIMP4 (ENSBBBG00000011264) SYN2 (ENSBBBG00000011280) PPARG (ENSBBBG00000011336) #18 TSEN2 (ENSBBBG00000002087) #19 MKRN2OS (ENSBBBG00000006934) #20 MKRN2 (ENSBBBG00000011440) #22 RAF1 (ENSBBBG00000011493) #23 TMEM40 (ENSBBBG00000011569) CAND2 (ENSBBBG00000002144) RPL32 (ENSBBBG00000002148) EFCAB12 (ENSBBBG00000011681) MBD4 (ENSBBBG00000011698) IFT122 (ENSBBBG00000002240) RHO (ENSBBBG00000012003) ENSBBBG00000012007 ENSBBBG00000012012 TMCC1 (ENSBBBG00000012034) ENSBBBG00000012036 TRH (ENSBBBG00000012040) TAMM41 (ENSBBBG00000012063) VGLL4 (ENSBBBG00000012100) Cetacea ANCESTRAL SPECIES 7 ENSGT00940000155616.c.a.a ENSGT00390000004064 ENSGT00940000153393.B.`b ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT01010000229800 ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 Odontoceti ANCESTRAL SPECIES 5 ENSGT00940000155616.c.a.a ENSGT00390000004064 ENSGT00940000153393.B.`b ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT00930000152979 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558.n Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00940000155616.c.a.a ENSGT00390000004064 ENSGT00940000153393.B.`b ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558.n ENSGT00940000158393 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00940000155616.c.a.a ENSGT00390000004064 ENSGT00940000153393.B.`b ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558.n ENSGT00940000158393 Monodontidae ANCESTRAL SPECIES 4 ENSGT00940000155616.c.a.a ENSGT00390000004064 ENSGT00940000153393.B.`b ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558.n ENSGT00940000158393 Beluga whale MODERN SPECIES 66 IRAK2 (ENSDLEG00000014959) ENSDLEG00000014979 ENSDLEG00000014986 GHRL (ENSDLEG00000015002) SEC13 (ENSDLEG00000015045) ATP2B2 (ENSDLEG00000015650) SLC6A11 (ENSDLEG00000021059) SLC6A1 (ENSDLEG00000021420) HRH1 (ENSDLEG00000021424) ATG7 (ENSDLEG00000021427) TAMM41 (ENSDLEG00000021438) SYN2 (ENSDLEG00000021448) TIMP4 (ENSDLEG00000021450) ENSDLEG00000021458 #18 ENSDLEG00000021477 MKRN2 (ENSDLEG00000021478) #22 RAF1 (ENSDLEG00000007956) #23 TMEM40 (ENSDLEG00000008007) CAND2 (ENSDLEG00000008059) RPL32 (ENSDLEG00000008175) ENSDLEG00000008201 MBD4 (ENSDLEG00000008239) IFT122 (ENSDLEG00000008304) RHO (ENSDLEG00000008470) H1-8 (ENSDLEG00000008521) PLXND1 (ENSDLEG00000008614) TMCC1 (ENSDLEG00000008842) TRH (ENSDLEG00000008893) RBSN (ENSDLEG00000008914) ENSDLEG00000008956 ENSDLEG00000008967 Narwhal MODERN SPECIES 310 GHRL (ENSMMNG00015011143) SEC13 (ENSMMNG00015011196) ATP2B2 (ENSMMNG00015011282) ENSMMNG00015011333 SLC6A11 (ENSMMNG00015011359) SLC6A1 (ENSMMNG00015011419) HRH1 (ENSMMNG00015011469) ATG7 (ENSMMNG00015011505) VGLL4 (ENSMMNG00015011616) TAMM41 (ENSMMNG00015011672) SYN2 (ENSMMNG00015011708) TIMP4 (ENSMMNG00015011737) PPARG (ENSMMNG00015011771) #18 TSEN2 (ENSMMNG00015011810) #19 MKRN2OS (ENSMMNG00015011881) #20 MKRN2 (ENSMMNG00015011904) #22 RAF1 (ENSMMNG00015011951) #23 TMEM40 (ENSMMNG00015012000) CAND2 (ENSMMNG00015012039) RPL32 (ENSMMNG00015012118) EFCAB12 (ENSMMNG00015012144) MBD4 (ENSMMNG00015012156) IFT122 (ENSMMNG00015012203) RHO (ENSMMNG00015012293) H1-8 (ENSMMNG00015012313) PLXND1 (ENSMMNG00015012370) TMCC1 (ENSMMNG00015012483) TRH (ENSMMNG00015012517) RBSN (ENSMMNG00015012525) ENSMMNG00015012540 NR2C2 (ENSMMNG00015012595) Vaquita MODERN SPECIES 2 TATDN2 (ENSPSNG00000016441) GHRL (ENSPSNG00000016272) ENSPSNG00000015998 ATP2B2 (ENSPSNG00000013827) SLC6A11 (ENSPSNG00000013275) SLC6A1 (ENSPSNG00000012418) HRH1 (ENSPSNG00000012320) ATG7 (ENSPSNG00000011678) VGLL4 (ENSPSNG00000011411) TAMM41 (ENSPSNG00000011313) TIMP4 (ENSPSNG00000011214) SYN2 (ENSPSNG00000010964) PPARG (ENSPSNG00000010554) #18 TSEN2 (ENSPSNG00000010460) #19 MKRN2OS (ENSPSNG00000010409) #20 MKRN2 (ENSPSNG00000010288) #22 RAF1 (ENSPSNG00000010184) #23 TMEM40 (ENSPSNG00000010002) CAND2 (ENSPSNG00000009832) RPL32 (ENSPSNG00000022724) EFCAB12 (ENSPSNG00000022723) MBD4 (ENSPSNG00000022722) IFT122 (ENSPSNG00000022721) RHO (ENSPSNG00000022720) H1-8 (ENSPSNG00000022719) PLXND1 (ENSPSNG00000022718) ENSPSNG00000022717 ENSPSNG00000022714 TRH (ENSPSNG00000022713) RBSN (ENSPSNG00000022712) ENSPSNG00000022711 Sperm whale MODERN SPECIES 9 ENSPCTG00005007736 IRAK2 (ENSPCTG00005007701) TATDN2 (ENSPCTG00005007678) GHRL (ENSPCTG00005007648) SEC13 (ENSPCTG00005007576) SLC6A11 (ENSPCTG00005007501) SLC6A1 (ENSPCTG00005006885) HRH1 (ENSPCTG00005006823) ATG7 (ENSPCTG00005006565) VGLL4 (ENSPCTG00005006432) TAMM41 (ENSPCTG00005006384) TIMP4 (ENSPCTG00005006355) SYN2 (ENSPCTG00005006330) PPARG (ENSPCTG00005006236) #18 MKRN2OS (ENSPCTG00005006199) #20 MKRN2 (ENSPCTG00005006141) #22 RAF1 (ENSPCTG00005006081) #23 ENSPCTG00005006042 ENSPCTG00005006016 EFCAB12 (ENSPCTG00005005960) MBD4 (ENSPCTG00005005918) IFT122 (ENSPCTG00005005825) RHO (ENSPCTG00005005781) H1-8 (ENSPCTG00005005747) ENSPCTG00005005647 ENSPCTG00005005684 TRH (ENSPCTG00005005621) ENSPCTG00005005601 TMCC1 (ENSPCTG00005005558) RBSN (ENSPCTG00005005519) MRPS25 (ENSPCTG00005005475) Blue whale DUPLICATION Blue whale MODERN SPECIES ENSBMSG00010001698 IFFO2 (ENSBMSG00010001679) ALDH4A1 (ENSBMSG00010001659) TAS1R2 (ENSBMSG00010001618) PAX7 (ENSBMSG00010001523) KLHDC7A (ENSBMSG00010001507) IGSF21 (ENSBMSG00010001491) ACTL8 (ENSBMSG00010001478) ARHGEF10L (ENSBMSG00010001332) RCC2 (ENSBMSG00010001248) PADI6 (ENSBMSG00010001172) PADI4 (ENSBMSG00010001111) PADI1 (ENSBMSG00010001060) PADI2 (ENSBMSG00010001016) ENSBMSG00010000986 ENSBMSG00010000977 #22 SDHB (ENSBMSG00010000950) ENSBMSG00010000692 MFAP2 (ENSBMSG00010000626) CROCC (ENSBMSG00010000545) NECAP2 (ENSBMSG00010000450) SPATA21 (ENSBMSG00010000388) SZRD1 (ENSBMSG00010000357) FBXO42 (ENSBMSG00010000326) CPLANE2 (ENSBMSG00010000300) ARHGEF19 (ENSBMSG00010000217) EPHA2 (ENSBMSG00010000136) FAM131C (ENSBMSG00010000090) ENSBMSG00010000048 HSPB7 (ENSBMSG00010000026) SRARP (ENSBMSG00010000016) Blue whale MODERN SPECIES 2 SEC13 (ENSBMSG00010008420) ATP2B2 (ENSBMSG00010008618) SLC6A11 (ENSBMSG00010009702) SLC6A1 (ENSBMSG00010009806) ENSBMSG00010009900 HRH1 (ENSBMSG00010009905) ATG7 (ENSBMSG00010009931) ENSBMSG00010009994 ENSBMSG00010010031 TAMM41 (ENSBMSG00010010044) SYN2 (ENSBMSG00010010076) TIMP4 (ENSBMSG00010010106) PPARG (ENSBMSG00010010135) #18 TSEN2 (ENSBMSG00010010317) #19 MKRN2OS (ENSBMSG00010010343) #20 MKRN2 (ENSBMSG00010010365) #22 RAF1 (ENSBMSG00010010408) #23 TMEM40 (ENSBMSG00010010438) CAND2 (ENSBMSG00010010467) RPL32 (ENSBMSG00010010483) EFCAB12 (ENSBMSG00010010503) ENSBMSG00010010533 ENSBMSG00010010542 IFT122 (ENSBMSG00010010593) RHO (ENSBMSG00010010727) ENSBMSG00010010803 PLXND1 (ENSBMSG00010010833) TMCC1 (ENSBMSG00010010919) TRH (ENSBMSG00010010946) RBSN (ENSBMSG00010010963) MRPS25 (ENSBMSG00010010976) Suina ANCESTRAL SPECIES 1 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.b.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT01010000229800 ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 Chacoan peccary MODERN SPECIES 950 SEC13 (ENSCWAG00000021789) ENSCWAG00000011861 ATP2B2 (ENSCWAG00000012003) SLC6A11 (ENSCWAG00000015415) SLC6A1 (ENSCWAG00000015592) HRH1 (ENSCWAG00000016580) ATG7 (ENSCWAG00000016602) VGLL4 (ENSCWAG00000016758) ENSCWAG00000016872 TAMM41 (ENSCWAG00000016892) SYN2 (ENSCWAG00000016935) TIMP4 (ENSCWAG00000017007) PPARG (ENSCWAG00000017057) #18 TSEN2 (ENSCWAG00000017441) #19 ENSCWAG00000017774 MKRN2 (ENSCWAG00000017797) #22 RAF1 (ENSCWAG00000017888) #23 TMEM40 (ENSCWAG00000017953) CAND2 (ENSCWAG00000018031) RPL32 (ENSCWAG00000018094) EFCAB12 (ENSCWAG00000018153) ENSCWAG00000018222 ENSCWAG00000018236 ENSCWAG00000018255 IFT122 (ENSCWAG00000018289) RHO (ENSCWAG00000018568) H1-8 (ENSCWAG00000018609) PLXND1 (ENSCWAG00000018660) TMCC1 (ENSCWAG00000018870) TRH (ENSCWAG00000018918) RBSN (ENSCWAG00000018943) Pig MODERN SPECIES 4 GHRL (ENSSSCG00000011568) SEC13 (ENSSSCG00000011572) ATP2B2 (ENSSSCG00000023084) SLC6A11 (ENSSSCG00000039850) SLC6A1 (ENSSSCG00000011577) HRH1 (ENSSSCG00000011576) ATG7 (ENSSSCG00000011575) VGLL4 (ENSSSCG00000030581) TAMM41 (ENSSSCG00000011578) SYN2 (ENSSSCG00000023225) TIMP4 (ENSSSCG00000033000) PPARG (ENSSSCG00000011579) #18 TSEN2 (ENSSSCG00000011580) #19 MKRN2OS (ENSSSCG00000011581) #20 ENSSSCG00000045850 MKRN2 (ENSSSCG00000029877) #22 RAF1 (ENSSSCG00000024453) #23 ENSSSCG00000056163 TMEM40 (ENSSSCG00000011583) CAND2 (ENSSSCG00000011582) RPL32 (ENSSSCG00000035811) EFCAB12 (ENSSSCG00000011587) MBD4 (ENSSSCG00000033303) IFT122 (ENSSSCG00000011589) RHO (ENSSSCG00000011590) H1-8 (ENSSSCG00000011591) PLXND1 (ENSSSCG00000011592) TMCC1 (ENSSSCG00000011593) ENSSSCG00000040441 ENSSSCG00000044894 TRH (ENSSSCG00000055507) Atlantogenata ANCESTRAL SPECIES 34 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00940000153973.c.a.b.b ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 Afrotheria ANCESTRAL SPECIES 32 ENSGT00390000011082 ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Tenrec MODERN SPECIES 7278 MKRN2 (ENSETEG00000003970) #22 RAF1 (ENSETEG00000003974) #23 Afrotheria_a ANCESTRAL SPECIES 32 ENSGT00940000159835 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973.c.a.a ENSGT00390000014874 ENSGT00530000063687.a ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Hyrax MODERN SPECIES 10043 MKRN2 (ENSPCAG00000016175) #22 RAF1 (ENSPCAG00000016080) #23 Elephant MODERN SPECIES 49 IRAK2 (ENSLAFG00000002546) TATDN2 (ENSLAFG00000028812) GHRL (ENSLAFG00000014068) SEC13 (ENSLAFG00000014598) ATP2B2 (ENSLAFG00000014604) SLC6A11 (ENSLAFG00000016494) SLC6A1 (ENSLAFG00000022374) HRH1 (ENSLAFG00000017128) ATG7 (ENSLAFG00000017130) VGLL4 (ENSLAFG00000017133) TAMM41 (ENSLAFG00000011239) TIMP4 (ENSLAFG00000004660) SYN2 (ENSLAFG00000004657) PPARG (ENSLAFG00000030870) #18 TSEN2 (ENSLAFG00000009300) #19 MKRN2 (ENSLAFG00000011601) #22 RAF1 (ENSLAFG00000011608) #23 TMEM40 (ENSLAFG00000010230) CAND2 (ENSLAFG00000017706) ENSLAFG00000032737 EFCAB12 (ENSLAFG00000010605) MBD4 (ENSLAFG00000010609) IFT122 (ENSLAFG00000010612) RHO (ENSLAFG00000001359) PLXND1 (ENSLAFG00000003012) TMCC1 (ENSLAFG00000013730) TRH (ENSLAFG00000015165) RBSN (ENSLAFG00000004227) MRPS25 (ENSLAFG00000022178) NR2C2 (ENSLAFG00000010224) FGD5 (ENSLAFG00000010491) Xenarthra ANCESTRAL SPECIES 662 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017740.a.b Sloth MODERN SPECIES 7323 MKRN2 (ENSCHOG00000005438) #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 1334 SYN2 (ENSDNOG00000012852) TIMP4 (ENSDNOG00000012868) PPARG (ENSDNOG00000018641) #18 TSEN2 (ENSDNOG00000038504) #19 MKRN2OS (ENSDNOG00000042709) #20 ENSDNOG00000017476 #22 RAF1 (ENSDNOG00000009252) #23 CAND2 (ENSDNOG00000040049) Armadillo MODERN SPECIES 3990 ENSDNOG00000046250 ENSDNOG00000038909 ENSDNOG00000017670 ENSDNOG00000037191 ENSDNOG00000041414 ENSDNOG00000041622 ENSDNOG00000036350 ENSDNOG00000040494 #22 Marsupialia ANCESTRAL SPECIES 14 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00940000154650.d.g.b.a.a.a.b ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973 ENSGT00390000014874 ENSGT00530000063687.a.a ENSGT00530000063687.a.b ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 Opossum MODERN SPECIES 5 ENSMODG00000039480 SEC13 (ENSMODG00000005505) ATP2B2 (ENSMODG00000005537) SLC6A11 (ENSMODG00000005602) SLC6A1 (ENSMODG00000005984) HRH1 (ENSMODG00000006000) ENSMODG00000006043 ATG7 (ENSMODG00000006136) VGLL4 (ENSMODG00000006145) ENSMODG00000006153 SYN2 (ENSMODG00000006159) TIMP4 (ENSMODG00000006199) PPARG (ENSMODG00000006233) #18 TSEN2 (ENSMODG00000006249) #19 MKRN2OS (ENSMODG00000006265) #20 MKRN2 (ENSMODG00000006280) #22 RAF1 (ENSMODG00000006307) #23 ENSMODG00000025518 CAND2 (ENSMODG00000006377) RPL32 (ENSMODG00000037211) ENSMODG00000006335 ENSMODG00000006399 ENSMODG00000042737 IFT122 (ENSMODG00000006462) RHO (ENSMODG00000006488) ENSMODG00000028422 PLXND1 (ENSMODG00000006963) TMCC1 (ENSMODG00000006987) ENSMODG00000044035 ENSMODG00000042057 ENSMODG00000028708 Marsupialia_b ANCESTRAL SPECIES 14 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00940000154650.d.g.b.a.a.a.b ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973 ENSGT00390000014874 ENSGT00530000063687.a.a ENSGT00530000063687.a.b ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT00940000160900 ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 Diprotodontia ANCESTRAL SPECIES 12 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00940000154650.d.g.b.a.a.a.b ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973 ENSGT00390000014874 ENSGT00530000063687.a.a ENSGT00530000063687.a.b ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 Wallaby MODERN SPECIES 9824 MKRN2 (ENSMEUG00000004347) #22 RAF1 (ENSMEUG00000004360) #23 Diprotodontia_a ANCESTRAL SPECIES 10 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00940000154650.d.g.b.a.a.a.b ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 ENSGT00390000017740.a.b ENSGT00940000153973 ENSGT00390000014874 ENSGT00530000063687.a.a ENSGT00530000063687.a.b ENSGT00390000001016.b ENSGT01030000234549.a.a.a.a.a.b.b ENSGT01020000230394.e.b.a ENSGT00940000155189 ENSGT00390000016951 ENSGT00390000007159 ENSGT00640000091558 ENSGT00940000158393 koala MODERN SPECIES 10 GHRL (ENSPCIG00000021917) ENSPCIG00000021918 ATP2B2 (ENSPCIG00000024350) SLC6A11 (ENSPCIG00000011028) SLC6A1 (ENSPCIG00000011049) HRH1 (ENSPCIG00000011053) ENSPCIG00000011056 ATG7 (ENSPCIG00000011062) VGLL4 (ENSPCIG00000011097) TAMM41 (ENSPCIG00000036857) SYN2 (ENSPCIG00000002007) TIMP4 (ENSPCIG00000002040) PPARG (ENSPCIG00000002060) #18 TSEN2 (ENSPCIG00000002191) #19 MKRN2OS (ENSPCIG00000002201) #20 MKRN2 (ENSPCIG00000031653) #22 RAF1 (ENSPCIG00000009694) #23 TMEM40 (ENSPCIG00000002215) CAND2 (ENSPCIG00000002229) RPL32 (ENSPCIG00000036095) ENSPCIG00000002263 ENSPCIG00000002276 ENSPCIG00000035263 IFT122 (ENSPCIG00000002304) RHO (ENSPCIG00000002359) PLXND1 (ENSPCIG00000002459) TMCC1 (ENSPCIG00000002496) ENSPCIG00000023527 RBSN (ENSPCIG00000023528) ENSPCIG00000023530 NR2C2 (ENSPCIG00000023531) Common wonbat MODERN SPECIES 1012 GHRL (ENSVURG00010011569) ENSVURG00010011601 SLC6A11 (ENSVURG00010011698) ENSVURG00010011722 SLC6A1 (ENSVURG00010011767) HRH1 (ENSVURG00010012968) ATG7 (ENSVURG00010012989) VGLL4 (ENSVURG00010013026) TAMM41 (ENSVURG00010013046) ENSVURG00010013071 TIMP4 (ENSVURG00010013076) ENSVURG00010013080 PPARG (ENSVURG00010013093) #18 TSEN2 (ENSVURG00010013138) #19 MKRN2OS (ENSVURG00010013158) #20 MKRN2 (ENSVURG00010013169) #22 RAF1 (ENSVURG00010013196) #23 TMEM40 (ENSVURG00010013215) CAND2 (ENSVURG00010013279) ENSVURG00010014192 ENSVURG00010014212 ENSVURG00010014225 IFT122 (ENSVURG00010014263) RHO (ENSVURG00010014434) PLXND1 (ENSVURG00010014456) TMCC1 (ENSVURG00010014518) RBSN (ENSVURG00010014533) MRPS25 (ENSVURG00010014548) NR2C2 (ENSVURG00010014575) ENSVURG00010014858 FGD5 (ENSVURG00010014863) Tasmanian devil DUPLICATION Tasmanian devil MODERN SPECIES SEC13 (ENSSHAG00000016558) ENSSHAG00000017272 SLC6A11 (ENSSHAG00000026964) ENSSHAG00000018140 HRH1 (ENSSHAG00000028397) ATG7 (ENSSHAG00000022602) ENSSHAG00000031478 ENSSHAG00000027506 ENSSHAG00000018702 TAMM41 (ENSSHAG00000018802) SYN2 (ENSSHAG00000006422) TIMP4 (ENSSHAG00000006738) PPARG (ENSSHAG00000008610) #18 TSEN2 (ENSSHAG00000010530) #19 MKRN2OS (ENSSHAG00000010787) #20 ENSSHAG00000011021 #22 RAF1 (ENSSHAG00000011099) #23 TMEM40 (ENSSHAG00000012194) CAND2 (ENSSHAG00000012567) ENSSHAG00000012782 ENSSHAG00000012822 MBD4 (ENSSHAG00000012953) IFT122 (ENSSHAG00000013078) RHO (ENSSHAG00000013534) ENSSHAG00000029482 PLXND1 (ENSSHAG00000013651) TMCC1 (ENSSHAG00000014733) ENSSHAG00000026312 ENSSHAG00000015988 NR2C2 (ENSSHAG00000016078) ENSSHAG00000024996 Tasmanian devil MODERN SPECIES 5 ENSSHAG00000018284 ENSSHAG00000018331 E2F8 (ENSSHAG00000018372) ENSSHAG00000028087 ENSSHAG00000008439 DBX1 (ENSSHAG00000011774) HTATIP2 (ENSSHAG00000028422) PRMT3 (ENSSHAG00000012761) SLC6A5 (ENSSHAG00000013820) NELL1 (ENSSHAG00000030702) ENSSHAG00000008387 ANO5 (ENSSHAG00000012452) SLC17A6 (ENSSHAG00000031119) ENSSHAG00000023873 GAS2 (ENSSHAG00000014709) ENSSHAG00000015939 #22 LUZP2 (ENSSHAG00000023207) ENSSHAG00000029103 ANO3 (ENSSHAG00000007618) SLC5A12 (ENSSHAG00000009558) FIBIN (ENSSHAG00000023983) BBOX1 (ENSSHAG00000011451) ENSSHAG00000012905 LGR4 (ENSSHAG00000013104) LIN7C (ENSSHAG00000013710) BDNF (ENSSHAG00000014528) KIF18A (ENSSHAG00000015625) ENSSHAG00000015956 KCNA4 (ENSSHAG00000031255) FSHB (ENSSHAG00000009491) ARL14EP (ENSSHAG00000025815) Platypus MODERN SPECIES 83 NAE1 (ENSOANG00000001061) ENSOANG00000030932 ENSOANG00000032301 ENSOANG00000030783 ENSOANG00000029079 ENSOANG00000031931 CA7 (ENSOANG00000012209) PDP2 (ENSOANG00000015274) ENSOANG00000042386 RRAD (ENSOANG00000013935) CIAO2B (ENSOANG00000045690) ENSOANG00000011648 #19 MKRN2OS (ENSOANG00000039177) #20 MKRN2 (ENSOANG00000038817) #22 RAF1 (ENSOANG00000005684) #23 ENSOANG00000045625 ISY1 (ENSOANG00000013141) PPARG (ENSOANG00000046286) #18 SYN2 (ENSOANG00000020050) SEMA3G (ENSOANG00000013236) LINGO3 (ENSOANG00000003705) ENSOANG00000030064 OAZ1 (ENSOANG00000000654) ENSOANG00000036300 DOT1L (ENSOANG00000010015) ENSOANG00000050388 MOB3A (ENSOANG00000040976) MKNK2 (ENSOANG00000048798) ENSOANG00000036327 Sauria ANCESTRAL SPECIES 13 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 Archelosauria ANCESTRAL SPECIES 17 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 Cryptodira ANCESTRAL SPECIES 41 ENSGT00390000011897 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569.b ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00390000011897 ENSGT00390000004860.nb ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569.b ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 Emydidae ANCESTRAL SPECIES 9 ENSGT00390000011897 ENSGT00390000004860.nb ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569.b ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 painted turtle MODERN SPECIES 14 CENPP (ENSCPBG00000006781) NOL8 (ENSCPBG00000006773) IARS1 (ENSCPBG00000001174) ENSCPBG00000000579 SLC6A11 (ENSCPBG00000000487) ENSCPBG00000000450 SLC6A1 (ENSCPBG00000000431) HRH1 (ENSCPBG00000000415) ATG7 (ENSCPBG00000000334) TAMM41 (ENSCPBG00000000254) TIMP4 (ENSCPBG00000026368) SYN2 (ENSCPBG00000026365) PPARG (ENSCPBG00000026361) #18 TSEN2 (ENSCPBG00000026359) #19 MKRN2OS (ENSCPBG00000026357) #20 MKRN2 (ENSCPBG00000026356) #22 RAF1 (ENSCPBG00000026352) #23 ENSCPBG00000026349 ENSCPBG00000026348 ISY1 (ENSCPBG00000026346) ENSCPBG00000026344 RAB43 (ENSCPBG00000026343) ENSCPBG00000026342 Three-toed box turtle MODERN SPECIES 107 ENSTMTG00000016992 ENSTMTG00000016954 IARS1 (ENSTMTG00000016725) ENSTMTG00000016217 SLC6A11 (ENSTMTG00000016054) SLC6A1 (ENSTMTG00000015874) HRH1 (ENSTMTG00000015850) ATG7 (ENSTMTG00000015759) VGLL4 (ENSTMTG00000015729) TAMM41 (ENSTMTG00000015707) TIMP4 (ENSTMTG00000015688) SYN2 (ENSTMTG00000015621) PPARG (ENSTMTG00000015596) #18 TSEN2 (ENSTMTG00000015573) #19 ENSTMTG00000015561 MKRN2 (ENSTMTG00000015544) #22 RAF1 (ENSTMTG00000015520) #23 ENSTMTG00000015505 ISY1 (ENSTMTG00000015483) ENSTMTG00000015448 RAB43 (ENSTMTG00000015431) GP9 (ENSTMTG00000010971) EFCC1 (ENSTMTG00000010945) CFAP92 (ENSTMTG00000010898) ACAD9 (ENSTMTG00000010840) IQSEC1 (ENSTMTG00000010796) Testudinidae ANCESTRAL SPECIES 5 ENSGT00390000011897 ENSGT00390000004860.nb.c ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569.b ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.c.b ENSGT00940000167251 ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 Goode s thornscrub tortoise MODERN SPECIES 21 ENSGEVG00005015160 ENSGEVG00005015198 IARS1 (ENSGEVG00005015240) ATP2B2 (ENSGEVG00005015471) SLC6A11 (ENSGEVG00005017116) SLC6A1 (ENSGEVG00005017316) HRH1 (ENSGEVG00005017663) ATG7 (ENSGEVG00005017701) VGLL4 (ENSGEVG00005017769) TAMM41 (ENSGEVG00005017797) SYN2 (ENSGEVG00005017832) TIMP4 (ENSGEVG00005017900) PPARG (ENSGEVG00005017941) #18 TSEN2 (ENSGEVG00005017977) #19 MKRN2OS (ENSGEVG00005017994) #20 MKRN2 (ENSGEVG00005018003) #22 RAF1 (ENSGEVG00005018027) #23 ENSGEVG00005018078 ENSGEVG00005005307 ENSGEVG00005005367 ENSGEVG00005005430 RAB43 (ENSGEVG00005005485) GP9 (ENSGEVG00005005510) ENSGEVG00005005535 ENSGEVG00005005602 ACAD9 (ENSGEVG00005005630) IQSEC1 (ENSGEVG00005005708) NUP210 (ENSGEVG00005005766) HDAC11 (ENSGEVG00005005930) ENSGEVG00005005963 FBLN2 (ENSGEVG00005005981) Abingdon island giant tortoise MODERN SPECIES 252 TIMP4 (ENSCABG00000022127) SYN2 (ENSCABG00000022126) PPARG (ENSCABG00000022125) #18 ENSCABG00000022124 TSEN2 (ENSCABG00000022123) #19 ENSCABG00000022122 MKRN2 (ENSCABG00000022121) #22 RAF1 (ENSCABG00000022083) #23 Chinese turtle MODERN SPECIES 660 ENSPSIG00000015446 ENSPSIG00000015328 ENSPSIG00000015319 USP4 (ENSPSIG00000014081) HRH1 (ENSPSIG00000000512) ATG7 (ENSPSIG00000012300) VGLL4 (ENSPSIG00000012119) TAMM41 (ENSPSIG00000012037) TIMP4 (ENSPSIG00000011745) SYN2 (ENSPSIG00000011238) PPARG (ENSPSIG00000011100) #18 ENSPSIG00000010669 #19 MKRN2OS (ENSPSIG00000010665) #20 MKRN2 (ENSPSIG00000010483) #22 RAF1 (ENSPSIG00000009677) #23 ENSPSIG00000009556 ISY1 (ENSPSIG00000009384) Archosauria ANCESTRAL SPECIES 24 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 Australian saltwater crocodile MODERN SPECIES 37 OMD (ENSCPRG00005019193) OGN (ENSCPRG00005019192) IARS1 (ENSCPRG00005019188) ENSCPRG00005019186 SLC6A11 (ENSCPRG00005019185) SLC6A1 (ENSCPRG00005019184) HRH1 (ENSCPRG00005019183) ATG7 (ENSCPRG00005019181) VGLL4 (ENSCPRG00005019180) TAMM41 (ENSCPRG00005019178) TIMP4 (ENSCPRG00005019177) SYN2 (ENSCPRG00005019176) PPARG (ENSCPRG00005019174) #18 TSEN2 (ENSCPRG00005019173) #19 MKRN2OS (ENSCPRG00005019172) #20 MKRN2 (ENSCPRG00005019171) #22 RAF1 (ENSCPRG00005019170) #23 ENSCPRG00005019169 ISY1 (ENSCPRG00005019167) ENSCPRG00005019166 RAB43 (ENSCPRG00005019165) ENSCPRG00005019163 GP9 (ENSCPRG00005019162) ENSCPRG00005019161 CFAP92 (ENSCPRG00005019160) ACAD9 (ENSCPRG00005019159) IQSEC1 (ENSCPRG00005019158) NUP210 (ENSCPRG00005019156) HDAC11 (ENSCPRG00005019154) FBLN2 (ENSCPRG00005019153) WNT7A (ENSCPRG00005019151) Aves ANCESTRAL SPECIES 29 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00960000189495 African ostrich MODERN SPECIES 1066 OGN (ENSSCUG00000014870) NOL8 (ENSSCUG00000014881) IARS1 (ENSSCUG00000014894) ATP2B2 (ENSSCUG00000014930) SLC6A11 (ENSSCUG00000014961) SLC6A1 (ENSSCUG00000014975) HRH1 (ENSSCUG00000014994) ATG7 (ENSSCUG00000015003) VGLL4 (ENSSCUG00000015010) TAMM41 (ENSSCUG00000015017) TIMP4 (ENSSCUG00000015038) SYN2 (ENSSCUG00000015041) PPARG (ENSSCUG00000015050) #18 TSEN2 (ENSSCUG00000015062) #19 MKRN2OS (ENSSCUG00000015069) #20 MKRN2 (ENSSCUG00000015071) #22 RAF1 (ENSSCUG00000015081) #23 ENSSCUG00000015086 ISY1 (ENSSCUG00000015087) ENSSCUG00000015094 RAB43 (ENSSCUG00000015101) GP9 (ENSSCUG00000015105) CFAP92 (ENSSCUG00000015116) ACAD9 (ENSSCUG00000015133) NUP210 (ENSSCUG00000015147) HDAC11 (ENSSCUG00000015163) FBLN2 (ENSSCUG00000015170) WNT7A (ENSSCUG00000015175) ENSSCUG00000015181 PTPDC1 (ENSSCUG00000015185) PHF2 (ENSSCUG00000015198) Neognathae ANCESTRAL SPECIES 27 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00960000189495 Galloanserae ANCESTRAL SPECIES 26 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00960000189495 Anatidae ANCESTRAL SPECIES 54 ENSGT00390000011897 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 Pink-footed goose MODERN SPECIES 110 HRH1 (ENSABRG00000009830) ATG7 (ENSABRG00000009797) VGLL4 (ENSABRG00000009786) TAMM41 (ENSABRG00000009773) TIMP4 (ENSABRG00000009748) SYN2 (ENSABRG00000009741) PPARG (ENSABRG00000009733) #18 TSEN2 (ENSABRG00000009724) #19 ENSABRG00000009722 MKRN2 (ENSABRG00000009708) #22 RAF1 (ENSABRG00000009695) #23 ENSABRG00000009679 ISY1 (ENSABRG00000009673) ENSABRG00000009510 RAB43 (ENSABRG00000009489) GP9 (ENSABRG00000009470) EFCC1 (ENSABRG00000009460) CFAP92 (ENSABRG00000009441) ACAD9 (ENSABRG00000008890) IQSEC1 (ENSABRG00000008262) NUP210 (ENSABRG00000007910) HDAC11 (ENSABRG00000007799) FBLN2 (ENSABRG00000007418) WNT7A (ENSABRG00000007393) ENSABRG00000007383 Duck MODERN SPECIES 4 ENSAPLG00000030112 ATP2B2 (ENSAPLG00000006083) SLC6A11 (ENSAPLG00000006803) SLC6A1 (ENSAPLG00000010815) ENSAPLG00000024336 HRH1 (ENSAPLG00000011710) ATG7 (ENSAPLG00000010216) VGLL4 (ENSAPLG00000010053) TAMM41 (ENSAPLG00000009828) ENSAPLG00000028592 TIMP4 (ENSAPLG00000027938) SYN2 (ENSAPLG00000009144) PPARG (ENSAPLG00000009031) #18 ENSAPLG00000014992 #19 ENSAPLG00000017751 MKRN2 (ENSAPLG00000014833) #22 RAF1 (ENSAPLG00000014376) #23 ENSAPLG00000014227 ISY1 (ENSAPLG00000014136) RAB43 (ENSAPLG00000026304) GP9 (ENSAPLG00000001853) ENSAPLG00000013971 ENSAPLG00000013916 ACAD9 (ENSAPLG00000013493) IQSEC1 (ENSAPLG00000013323) NUP210 (ENSAPLG00000012355) HDAC11 (ENSAPLG00000012032) FBLN2 (ENSAPLG00000014027) WNT7A (ENSAPLG00000013876) ENSAPLG00000026214 PTPDC1 (ENSAPLG00000013824) Phasianidae ANCESTRAL SPECIES 16 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000004113 Phasianidae_b ANCESTRAL SPECIES 16 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000004113 Chicken MODERN SPECIES 3 NOL8 (ENSGALG00010027207) ENSGALG00010028201 IARS1 (ENSGALG00010027218) ATP2B2 (ENSGALG00010027231) SLC6A11 (ENSGALG00010027234) SLC6A1 (ENSGALG00010027240) HRH1 (ENSGALG00010027243) ATG7 (ENSGALG00010027247) VGLL4 (ENSGALG00010027253) TAMM41 (ENSGALG00010027263) SYN2 (ENSGALG00010027905) TIMP4 (ENSGALG00010027909) PPARG (ENSGALG00010027917) #18 TSEN2 (ENSGALG00010027919) #19 MKRN2OS (ENSGALG00010027921) #20 MKRN2 (ENSGALG00010027925) #22 RAF1 (ENSGALG00010027930) #23 CNBP (ENSGALG00010027934) ISY1 (ENSGALG00010027935) ENSGALG00010027938 RAB43 (ENSGALG00010027943) GP9 (ENSGALG00010027947) ENSGALG00010027958 CFAP92 (ENSGALG00010027954) ACAD9 (ENSGALG00010027965) IQSEC1 (ENSGALG00010027975) NUP210 (ENSGALG00010027980) HDAC11 (ENSGALG00010027988) FBLN2 (ENSGALG00010027649) WNT7A (ENSGALG00010027653) PTPDC1 (ENSGALG00010027667) Turkey MODERN SPECIES 5 NOL8 (ENSMGAG00000004495) IARS1 (ENSMGAG00000004555) ENSMGAG00000004661 SLC6A11 (ENSMGAG00000004717) SLC6A1 (ENSMGAG00000004819) HRH1 (ENSMGAG00000004868) ATG7 (ENSMGAG00000004873) ENSMGAG00000019207 VGLL4 (ENSMGAG00000004921) TAMM41 (ENSMGAG00000004937) ENSMGAG00000021149 SYN2 (ENSMGAG00000004944) TIMP4 (ENSMGAG00000004964) PPARG (ENSMGAG00000004981) #18 TSEN2 (ENSMGAG00000005015) #19 MKRN2 (ENSMGAG00000005057) #22 RAF1 (ENSMGAG00000005082) #23 ENSMGAG00000005152 ISY1 (ENSMGAG00000005181) ENSMGAG00000005131 ENSMGAG00000005141 GP9 (ENSMGAG00000015506) ENSMGAG00000005211 ACAD9 (ENSMGAG00000005216) IQSEC1 (ENSMGAG00000005294) NUP210 (ENSMGAG00000005324) HDAC11 (ENSMGAG00000005351) FBLN2 (ENSMGAG00000005381) WNT7A (ENSMGAG00000005423) PTPDC1 (ENSMGAG00000005445) PHF2 (ENSMGAG00000005454) Japanese quail MODERN SPECIES 3 OMD (ENSCJPG00005012246) OGN (ENSCJPG00005012247) ENSCJPG00005012248 IARS1 (ENSCJPG00005012250) ENSCJPG00005012303 SLC6A11 (ENSCJPG00005012307) SLC6A1 (ENSCJPG00005012319) HRH1 (ENSCJPG00005012860) ATG7 (ENSCJPG00005012861) VGLL4 (ENSCJPG00005012862) TAMM41 (ENSCJPG00005012865) SYN2 (ENSCJPG00005012866) TIMP4 (ENSCJPG00005012867) PPARG (ENSCJPG00005012868) #18 TSEN2 (ENSCJPG00005012869) #19 MKRN2 (ENSCJPG00005012870) #22 MKRN2OS (ENSCJPG00005012871) #20 RAF1 (ENSCJPG00005012872) #23 ENSCJPG00005012873 ISY1 (ENSCJPG00005012874) ENSCJPG00005012875 RAB43 (ENSCJPG00005012876) GP9 (ENSCJPG00005012877) ENSCJPG00005012878 ENSCJPG00005012879 ACAD9 (ENSCJPG00005012880) IQSEC1 (ENSCJPG00005012881) NUP210 (ENSCJPG00005012882) HDAC11 (ENSCJPG00005012883) FBLN2 (ENSCJPG00005012884) WNT7A (ENSCJPG00005012887) Neognathae_b ANCESTRAL SPECIES 18 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000004113 Passeriformes ANCESTRAL SPECIES 16 ENSGT00390000004860 ENSGT00950000182865.b.b.b.c.a ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000004113 ENSGT00940000160218 Great tit DUPLICATION Great tit MODERN SPECIES 4 ADAMTS2 (ENSPMJG00000008215) RUFY1 (ENSPMJG00000008200) ENSPMJG00000008198 ENSPMJG00000008197 ENSPMJG00000008196 CANX (ENSPMJG00000008194) MAML1 (ENSPMJG00000008193) ENSPMJG00000008192 MGAT4B (ENSPMJG00000008191) SQSTM1 (ENSPMJG00000008190) ENSPMJG00000008189 TBC1D9B (ENSPMJG00000008188) RNF130 (ENSPMJG00000008163) FLT4 (ENSPMJG00000008144) ENSPMJG00000008142 ENSPMJG00000008140 #22 HMGXB3 (ENSPMJG00000008137) CSF1R (ENSPMJG00000008134) PDGFRB (ENSPMJG00000008128) ENSPMJG00000008125 SLC6A7 (ENSPMJG00000008124) ENSPMJG00000008123 ARSI (ENSPMJG00000008122) ENSPMJG00000008121 CD74 (ENSPMJG00000008120) RPS14 (ENSPMJG00000008117) NDST1 (ENSPMJG00000008113) SYNPO (ENSPMJG00000008111) MYOZ3 (ENSPMJG00000008108) RBM22 (ENSPMJG00000008107) DCTN4 (ENSPMJG00000008104) Great tit MODERN SPECIES 3 PTPDC1 (ENSPMJG00000004327) IARS1 (ENSPMJG00000004334) ATP2B2 (ENSPMJG00000004350) SLC6A11 (ENSPMJG00000004374) SLC6A1 (ENSPMJG00000004995) HRH1 (ENSPMJG00000005006) ATG7 (ENSPMJG00000005007) VGLL4 (ENSPMJG00000005038) TAMM41 (ENSPMJG00000005039) ENSPMJG00000005042 TIMP4 (ENSPMJG00000005043) ENSPMJG00000005053 PPARG (ENSPMJG00000005054) #18 TSEN2 (ENSPMJG00000005055) #19 MKRN2OS (ENSPMJG00000005056) #20 ENSPMJG00000005058 #22 RAF1 (ENSPMJG00000005061) #23 ENSPMJG00000005065 ENSPMJG00000005069 ISY1 (ENSPMJG00000005074) ENSPMJG00000005079 RAB43 (ENSPMJG00000005081) GP9 (ENSPMJG00000005082) ENSPMJG00000005084 ENSPMJG00000005086 ENSPMJG00000005087 CENPP (ENSPMJG00000005088) OGN (ENSPMJG00000005089) OMD (ENSPMJG00000005090) ASPN (ENSPMJG00000005091) ECM2 (ENSPMJG00000005093) Passeriformes_d ANCESTRAL SPECIES 16 ENSGT00390000004860 ENSGT00950000182865.b.b.b.c.a ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000014300.p ENSGT00950000183041.A ENSGT00390000014109.d.b.a ENSGT00940000164112.a ENSGT00940000161980.f ENSGT00530000064244.a ENSGT00940000163561 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000004113 Flycatcher MODERN SPECIES 3 ENSFALG00000009075 ENSFALG00000023030 IARS1 (ENSFALG00000010261) ENSFALG00000000003 ENSFALG00000028800 SLC6A11 (ENSFALG00000000004) SLC6A1 (ENSFALG00000000005) HRH1 (ENSFALG00000014152) ATG7 (ENSFALG00000000006) VGLL4 (ENSFALG00000000007) TAMM41 (ENSFALG00000000008) TIMP4 (ENSFALG00000023921) SYN2 (ENSFALG00000000009) PPARG (ENSFALG00000028484) #18 TSEN2 (ENSFALG00000000012) #19 MKRN2 (ENSFALG00000000015) #22 RAF1 (ENSFALG00000000018) #23 ENSFALG00000014288 ENSFALG00000025948 ENSFALG00000000023 ENSFALG00000000024 ENSFALG00000028736 ENSFALG00000000026 ENSFALG00000000031 IQSEC1 (ENSFALG00000000034) NUP210 (ENSFALG00000000036) HDAC11 (ENSFALG00000023220) ENSFALG00000026076 FBLN2 (ENSFALG00000009172) ENSFALG00000026079 WNT7A (ENSFALG00000024842) Passeriformes_g ANCESTRAL SPECIES 16 ENSGT00390000004860 ENSGT00950000182865.b.b.b.c.a ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000014300.p ENSGT00950000183041.A ENSGT00390000014109.d.b.a ENSGT00940000164112.a ENSGT00940000161980.f ENSGT00530000064244.a ENSGT00940000163561 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000004113 Passeroidea ANCESTRAL SPECIES 16 ENSGT00390000004860 ENSGT00950000182865.b.b.b.c.a ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000014300.p ENSGT00950000183041.A ENSGT00390000014109.d.b.a ENSGT00940000164112.a ENSGT00940000161980.f ENSGT00530000064244.a ENSGT00940000163561 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000004113 Zebra finch MODERN SPECIES 3 IARS1 (ENSTGUG00000004410) ATP2B2 (ENSTGUG00000004296) SLC6A11 (ENSTGUG00000004225) SLC6A1 (ENSTGUG00000004182) HRH1 (ENSTGUG00000004180) ATG7 (ENSTGUG00000004145) VGLL4 (ENSTGUG00000004136) TAMM41 (ENSTGUG00000004121) SYN2 (ENSTGUG00000004093) ENSTGUG00000025121 TIMP4 (ENSTGUG00000019602) PPARG (ENSTGUG00000004069) #18 ENSTGUG00000025620 TSEN2 (ENSTGUG00000004044) #19 MKRN2OS (ENSTGUG00000028016) #20 MKRN2 (ENSTGUG00000004017) #22 RAF1 (ENSTGUG00000004006) #23 ENSTGUG00000004001 ENSTGUG00000003998 ENSTGUG00000003984 RAB43 (ENSTGUG00000021700) GP9 (ENSTGUG00000003978) ENSTGUG00000023307 ACAD9 (ENSTGUG00000003909) IQSEC1 (ENSTGUG00000003876) ENSTGUG00000003823 ENSTGUG00000003803 FBLN2 (ENSTGUG00000003758) ENSTGUG00000022371 WNT7A (ENSTGUG00000003752) PTPDC1 (ENSTGUG00000003741) Common canary MODERN SPECIES 15 CENPP (ENSSCAG00000012700) ENSSCAG00000012697 IARS1 (ENSSCAG00000012686) ATP2B2 (ENSSCAG00000012674) SLC6A11 (ENSSCAG00000012356) SLC6A1 (ENSSCAG00000011359) HRH1 (ENSSCAG00000011131) ATG7 (ENSSCAG00000011122) VGLL4 (ENSSCAG00000011116) TAMM41 (ENSSCAG00000011113) TIMP4 (ENSSCAG00000011112) SYN2 (ENSSCAG00000011108) PPARG (ENSSCAG00000011103) #18 TSEN2 (ENSSCAG00000011099) #19 MKRN2OS (ENSSCAG00000011095) #20 MKRN2 (ENSSCAG00000011091) #22 RAF1 (ENSSCAG00000011068) #23 ENSSCAG00000011058 ENSSCAG00000011053 ISY1 (ENSSCAG00000011046) ENSSCAG00000010990 RAB43 (ENSSCAG00000010955) GP9 (ENSSCAG00000010953) ENSSCAG00000010950 ENSSCAG00000010945 ENSSCAG00000010943 ACAD9 (ENSSCAG00000010788) IQSEC1 (ENSSCAG00000010741) NUP210 (ENSSCAG00000010702) HDAC11 (ENSSCAG00000010687) FBLN2 (ENSSCAG00000010640) Medium ground finch MODERN SPECIES 321 SYN2 (ENSGFOG00000010635) PPARG (ENSGFOG00000010112) #18 TSEN2 (ENSGFOG00000009700) #19 MKRN2 (ENSGFOG00000010465) #22 RAF1 (ENSGFOG00000010417) #23 ENSGFOG00000010404 ENSGFOG00000010397 ENSGFOG00000010387 ENSGFOG00000010368 RAB43 (ENSGFOG00000010361) GP9 (ENSGFOG00000010358) Neognathae_c ANCESTRAL SPECIES 21 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000004113 Golden eagle MODERN SPECIES 12 ENSACCG00020010204 ENSACCG00020010173 IARS1 (ENSACCG00020010143) ATP2B2 (ENSACCG00020010108) SLC6A11 (ENSACCG00020010066) SLC6A1 (ENSACCG00020010053) HRH1 (ENSACCG00020010042) ATG7 (ENSACCG00020010015) VGLL4 (ENSACCG00020009982) TAMM41 (ENSACCG00020009963) TIMP4 (ENSACCG00020009945) SYN2 (ENSACCG00020009920) PPARG (ENSACCG00020009885) #18 TSEN2 (ENSACCG00020009874) #19 MKRN2OS (ENSACCG00020009863) #20 MKRN2 (ENSACCG00020009843) #22 RAF1 (ENSACCG00020009762) #23 ENSACCG00020009718 ISY1 (ENSACCG00020009699) ENSACCG00020009638 RAB43 (ENSACCG00020009539) GP9 (ENSACCG00020009526) ENSACCG00020009517 CFAP92 (ENSACCG00020009502) ACAD9 (ENSACCG00020009474) IQSEC1 (ENSACCG00020009446) NUP210 (ENSACCG00020009416) HDAC11 (ENSACCG00020009388) FBLN2 (ENSACCG00020009352) WNT7A (ENSACCG00020011302) PTPDC1 (ENSACCG00020011283) Kakapo MODERN SPECIES 3 ENSSHBG00005010656 ENSSHBG00005010633 IARS1 (ENSSHBG00005009904) ATP2B2 (ENSSHBG00005009663) SLC6A11 (ENSSHBG00005009639) SLC6A1 (ENSSHBG00005009619) HRH1 (ENSSHBG00005009603) ATG7 (ENSSHBG00005008229) VGLL4 (ENSSHBG00005008062) TAMM41 (ENSSHBG00005008045) TIMP4 (ENSSHBG00005008034) SYN2 (ENSSHBG00005008017) PPARG (ENSSHBG00005008004) #18 TSEN2 (ENSSHBG00005007982) #19 MKRN2OS (ENSSHBG00005007967) #20 MKRN2 (ENSSHBG00005007960) #22 RAF1 (ENSSHBG00005007932) #23 ENSSHBG00005007914 ISY1 (ENSSHBG00005007896) ENSSHBG00005007853 RAB43 (ENSSHBG00005007820) GP9 (ENSSHBG00005007812) ENSSHBG00005007802 CFAP92 (ENSSHBG00005007781) ACAD9 (ENSSHBG00005007759) IQSEC1 (ENSSHBG00005007655) NUP210 (ENSSHBG00005007487) HDAC11 (ENSSHBG00005007414) ENSSHBG00005007405 FBLN2 (ENSSHBG00005007366) WNT7A (ENSSHBG00005007337) Lepidosauria ANCESTRAL SPECIES 14 ENSGT00980000199506 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 ENSGT00960000189495 tuatara MODERN SPECIES 1318 TAMM41 (ENSSPUG00000018148) TIMP4 (ENSSPUG00000018140) SYN2 (ENSSPUG00000018134) PPARG (ENSSPUG00000018117) #18 TSEN2 (ENSSPUG00000018099) #19 MKRN2OS (ENSSPUG00000018090) #20 MKRN2 (ENSSPUG00000018086) #22 RAF1 (ENSSPUG00000018074) #23 ENSSPUG00000018059 ISY1 (ENSSPUG00000018050) ENSSPUG00000017987 RAB43 (ENSSPUG00000017960) PREX1 (ENSSPUG00000017929) Episquamata ANCESTRAL SPECIES 4 ENSGT00980000199506 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 ENSGT00960000189495 Laterata ANCESTRAL SPECIES 1 ENSGT00390000004860.gb ENSGT00390000004860.fb ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 ENSGT00960000189495 Common wall lizard MODERN SPECIES 10 ENSPMRG00000012475 ATP2B2 (ENSPMRG00000012496) SLC6A11 (ENSPMRG00000012549) SLC6A1 (ENSPMRG00000012556) ENSPMRG00000012565 HRH1 (ENSPMRG00000012568) ATG7 (ENSPMRG00000012572) VGLL4 (ENSPMRG00000012585) TAMM41 (ENSPMRG00000012590) SYN2 (ENSPMRG00000012608) TIMP4 (ENSPMRG00000012664) ENSPMRG00000012669 PPARG (ENSPMRG00000012674) #18 TSEN2 (ENSPMRG00000012682) #19 MKRN2OS (ENSPMRG00000012689) #20 MKRN2 (ENSPMRG00000012692) #22 RAF1 (ENSPMRG00000012698) #23 ENSPMRG00000012709 ISY1 (ENSPMRG00000012711) ENSPMRG00000012718 RAB43 (ENSPMRG00000012725) ENSPMRG00000012727 GP9 (ENSPMRG00000012730) ENSPMRG00000012736 ENSPMRG00000012740 EFCC1 (ENSPMRG00000012744) CFAP92 (ENSPMRG00000012752) ACAD9 (ENSPMRG00000012761) IQSEC1 (ENSPMRG00000012774) NUP210 (ENSPMRG00000012830) FBLN2 (ENSPMRG00000013185) Argentine black and white tegu MODERN SPECIES 8 ENSSMRG00000014853 RPL29 (ENSSMRG00000014854) IARS1 (ENSSMRG00000014856) ENSSMRG00000014887 SLC6A11 (ENSSMRG00000019567) SLC6A1 (ENSSMRG00000019568) HRH1 (ENSSMRG00000019569) ATG7 (ENSSMRG00000019571) VGLL4 (ENSSMRG00000019572) TAMM41 (ENSSMRG00000019573) SYN2 (ENSSMRG00000019575) TIMP4 (ENSSMRG00000019576) PPARG (ENSSMRG00000019578) #18 TSEN2 (ENSSMRG00000019579) #19 MKRN2OS (ENSSMRG00000019580) #20 MKRN2 (ENSSMRG00000019581) #22 RAF1 (ENSSMRG00000019582) #23 ENSSMRG00000019583 ISY1 (ENSSMRG00000019584) ENSSMRG00000019585 RAB43 (ENSSMRG00000019586) ENSSMRG00000019587 GP9 (ENSSMRG00000019588) ENSSMRG00000019589 ENSSMRG00000019590 ACAD9 (ENSSMRG00000019591) IQSEC1 (ENSSMRG00000019592) NUP210 (ENSSMRG00000019594) FBLN2 (ENSSMRG00000019596) ENSSMRG00000019598 WNT7A (ENSSMRG00000019599) Toxicofera ANCESTRAL SPECIES 3 ENSGT00980000199506 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 ENSGT00960000189495 Elapidae ANCESTRAL SPECIES 2 ENSGT00940000157238 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569.d ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062.k ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 ENSGT00960000189495 Indian cobra MODERN SPECIES 1 ENSNNAG00000000435 IARS1 (ENSNNAG00000018371) ENSNNAG00000018337 ATP2B2 (ENSNNAG00000018213) SLC6A11 (ENSNNAG00000018147) SLC6A1 (ENSNNAG00000018109) HRH1 (ENSNNAG00000018100) ATG7 (ENSNNAG00000018034) VGLL4 (ENSNNAG00000018012) TAMM41 (ENSNNAG00000018006) ENSNNAG00000018001 SYN2 (ENSNNAG00000017991) PPARG (ENSNNAG00000017984) #18 TSEN2 (ENSNNAG00000017971) #19 MKRN2OS (ENSNNAG00000017966) #20 MKRN2 (ENSNNAG00000017961) #22 RAF1 (ENSNNAG00000017955) #23 ENSNNAG00000017950 ENSNNAG00000017946 ISY1 (ENSNNAG00000017943) ENSNNAG00000017924 RAB43 (ENSNNAG00000017921) ENSNNAG00000017919 ENSNNAG00000017916 EFCC1 (ENSNNAG00000017915) CFAP92 (ENSNNAG00000017912) ACAD9 (ENSNNAG00000017867) IQSEC1 (ENSNNAG00000017851) NUP210 (ENSNNAG00000017830) ENSNNAG00000017810 FBLN2 (ENSNNAG00000017789) Elapidae_a ANCESTRAL SPECIES 8 ENSGT00940000157238 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569.d ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062.k ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 ENSGT00960000189495 Acanthophiinae ANCESTRAL SPECIES 10 ENSGT00940000157238 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569.d ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062.k ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 ENSGT00960000189495 Mainland tiger snake MODERN SPECIES 2 ENSNSUG00000020113 PPARG (ENSNSUG00000020114) #18 TSEN2 (ENSNSUG00000020115) #19 ENSNSUG00000020116 MKRN2 (ENSNSUG00000020117) #22 RAF1 (ENSNSUG00000020119) #23 ENSNSUG00000020120 ISY1 (ENSNSUG00000020121) ENSNSUG00000020122 RAB43 (ENSNSUG00000020123) ENSNSUG00000020124 GP9 (ENSNSUG00000020125) ENSNSUG00000020128 ACAD9 (ENSNSUG00000020129) IQSEC1 (ENSNSUG00000020130) ENSNSUG00000020131 NUP210 (ENSNSUG00000020136) FBLN2 (ENSNSUG00000020149) WNT7A (ENSNSUG00000020150) ENSNSUG00000020151 Eastern brown snake MODERN SPECIES 3 OGN (ENSPTXG00000009501) NOL8 (ENSPTXG00000009500) IARS1 (ENSPTXG00000009498) ATP2B2 (ENSPTXG00000007129) SLC6A11 (ENSPTXG00000007128) SLC6A1 (ENSPTXG00000007090) HRH1 (ENSPTXG00000007087) ATG7 (ENSPTXG00000007086) VGLL4 (ENSPTXG00000007085) TAMM41 (ENSPTXG00000007075) ENSPTXG00000007073 SYN2 (ENSPTXG00000007068) PPARG (ENSPTXG00000007067) #18 TSEN2 (ENSPTXG00000007066) #19 MKRN2OS (ENSPTXG00000007065) #20 MKRN2 (ENSPTXG00000007064) #22 RAF1 (ENSPTXG00000007063) #23 ENSPTXG00000007062 ISY1 (ENSPTXG00000007061) ENSPTXG00000007055 RAB43 (ENSPTXG00000007054) ENSPTXG00000007053 GP9 (ENSPTXG00000007052) EFCC1 (ENSPTXG00000007051) CFAP92 (ENSPTXG00000007050) ACAD9 (ENSPTXG00000007049) IQSEC1 (ENSPTXG00000006860) NUP210 (ENSPTXG00000006850) FBLN2 (ENSPTXG00000006820) WNT7A (ENSPTXG00000006810) ENSPTXG00000006808 Blue-lipped sea krait MODERN SPECIES 9066 MKRN2 (ENSLLTG00000012312) #22 RAF1 (ENSLLTG00000012297) #23 Lizard MODERN SPECIES 1 SLC6A1 (ENSACAG00000010020) ENSACAG00000035306 ENSACAG00000036621 ENSACAG00000043799 HRH1 (ENSACAG00000010219) ATG7 (ENSACAG00000010224) VGLL4 (ENSACAG00000010299) TAMM41 (ENSACAG00000010318) SYN2 (ENSACAG00000013404) ENSACAG00000028862 TIMP4 (ENSACAG00000013457) PPARG (ENSACAG00000013360) #18 TSEN2 (ENSACAG00000013345) #19 MKRN2OS (ENSACAG00000029532) #20 RAF1 (ENSACAG00000013194) #23 MKRN2 (ENSACAG00000013310) #22 ENSACAG00000038503 ISY1 (ENSACAG00000013166) ENSACAG00000013142 ENSACAG00000013126 ENSACAG00000013124 GP9 (ENSACAG00000022777) ENSACAG00000013121 ENSACAG00000013119 ACAD9 (ENSACAG00000012998) ENSACAG00000012926 ENSACAG00000045372 ENSACAG00000043082 ENSACAG00000043115 ENSACAG00000044780 ENSACAG00000036925 Anura ANCESTRAL SPECIES 338 ENSGT00390000014109 ENSGT00390000013266 #19 ENSGT00390000003839 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A Leishan spiny toad MODERN SPECIES 11 SLC25A6 (ENSLLEG00000028913) ENSLLEG00000028726 ENSLLEG00000028682 ENSLLEG00000028673 IVNS1ABP (ENSLLEG00000028612) GLRX2 (ENSLLEG00000028565) CDC73 (ENSLLEG00000028448) ENSLLEG00000028405 MITF (ENSLLEG00000028151) ENSLLEG00000028107 RAB43 (ENSLLEG00000028054) ENSLLEG00000028000 ISY1 (ENSLLEG00000027932) ENSLLEG00000027826 #19 MKRN2OS (ENSLLEG00000027800) #20 MKRN2 (ENSLLEG00000027692) #22 ENSLLEG00000027659 RAF1 (ENSLLEG00000027363) #23 ENSLLEG00000027044 ARL6IP5 (ENSLLEG00000026982) LMOD3 (ENSLLEG00000026945) ENSLLEG00000026927 FRMD4B (ENSLLEG00000026638) ENSLLEG00000026610 ENSLLEG00000026565 ENSLLEG00000026482 GP9 (ENSLLEG00000026438) ENSLLEG00000026375 ENSLLEG00000026113 ACAD9 (ENSLLEG00000025523) IQSEC1 (ENSLLEG00000024615) Frog MODERN SPECIES 4 STAB1 (ENSXETG00000044486) NT5DC2 (ENSXETG00000047019) pbrm1 (ENSXETG00000013671) ENSXETG00000043218 ENSXETG00000049370 glt8d1 (ENSXETG00000042897) spcs1 (ENSXETG00000013668) gnl3 (ENSXETG00000013669) nek4 (ENSXETG00000006888) ENSXETG00000046560 itih3 (ENSXETG00000006887) ENSXETG00000042890 mkrn2os (ENSXETG00000041950) #20 mkrn2 (ENSXETG00000043301) #22 raf1 (ENSXETG00000020163) #23 pparg (ENSXETG00000017422) #18 ENSXETG00000038805 ENSXETG00000042389 ENSXETG00000043200 ENSXETG00000045029 nisch (ENSXETG00000021467) uqcrc1 (ENSXETG00000021470) ENSXETG00000045653 ENSXETG00000045682 ENSXETG00000049123 XB5944457 [provisional] (ENSXETG00000012105) ENSXETG00000041612 ENSXETG00000024197 wnt7a (ENSXETG00000042176) Coelacanth MODERN SPECIES 1258 ENSLACG00000011638 TIMP4 (ENSLACG00000010983) ENSLACG00000010251 PPARG (ENSLACG00000009212) #18 TSEN2 (ENSLACG00000008466) #19 MKRN2 (ENSLACG00000007834) #22 RAF1 (ENSLACG00000007082) #23 ENSLACG00000006992 cnbpb (ENSLACG00000005327) ISY1 (ENSLACG00000004490) zgc:77375 (ENSLACG00000003572) RAB43 (ENSLACG00000002676) ENSLACG00000000602 Actinopterygii ANCESTRAL SPECIES 14 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000156062 ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00390000004199 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 Neopterygii ANCESTRAL SPECIES 38 ENSGT00550000074921 ENSGT00940000166500 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00390000004199 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 Osteoglossocephalai ANCESTRAL SPECIES 1 ENSGT00940000153541.D ENSGT00550000074921 ENSGT00940000166500 ENSGT00940000157569 ENSGT00940000156027.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B.f ENSGT00390000000616 ENSGT00940000156062.m ENSGT00940000159798 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A.a.b ENSGT00950000183041.A.a.a ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00390000004199 ENSGT00990000205530 ENSGT00940000157312 ENSGT00940000156915.f.b ENSGT00940000156308 ENSGT00940000156047.a ENSGT00940000158523.c.b ENSGT00940000164549.a.b ENSGT00940000160218 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES ENSGT00950000183077.a.b.o #22 P. kingsleyae MODERN SPECIES 1429 mkrn2 (ENSPKIG00000024352) #22 Osteoglossiformes ANCESTRAL SPECIES 57 ENSGT00550000074921 ENSGT00940000166500.k ENSGT00940000157569 ENSGT00940000156027.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B.f ENSGT00390000000616 ENSGT00940000159798.a.b ENSGT00940000156062.m ENSGT00940000159798.b ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b.p #22 ENSGT00940000156084 #23 ENSGT00950000183041.A.a.b ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00390000004199 ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915.f.b ENSGT00940000156308 ENSGT00940000156047.a ENSGT00940000158523.d ENSGT00940000158523.c.b ENSGT00940000164549.a.b P. kingsleyae MODERN SPECIES 60 iars1 (ENSPKIG00000025011) ENSPKIG00000024988 atp2b2 (ENSPKIG00000024938) SLC6A11 (ENSPKIG00000024908) slc6a1b (ENSPKIG00000024901) HRH1 (ENSPKIG00000024898) ATG7 (ENSPKIG00000024886) vgll4b (ENSPKIG00000024872) tamm41 (ENSPKIG00000024860) TIMP4 (ENSPKIG00000024854) SYN2 (ENSPKIG00000024841) PPARG (ENSPKIG00000024820) #18 tsen2 (ENSPKIG00000024801) #19 MKRN2OS (ENSPKIG00000024791) #20 ENSPKIG00000024788 #20 MKRN2 (ENSPKIG00000024724) #22 raf1b (ENSPKIG00000024636) #23 cnbpb (ENSPKIG00000024603) isy1 (ENSPKIG00000024592) ENSPKIG00000024576 rab43 (ENSPKIG00000024563) nuf2 (ENSPKIG00000024545) ENSPKIG00000024532 ENSPKIG00000024519 ENSPKIG00000024509 ENSPKIG00000024498 ENSPKIG00000024490 ENSPKIG00000024482 TULP1 (ENSPKIG00000024476) TEAD3 (ENSPKIG00000024423) ENSPKIG00000024382 Asian bonytongue MODERN SPECIES 14 iars1 (ENSSFOG00015001874) atp2b2 (ENSSFOG00015001733) SLC6A11 (ENSSFOG00015001655) slc6a1b (ENSSFOG00015001593) HRH1 (ENSSFOG00015001587) ATG7 (ENSSFOG00015001550) vgll4b (ENSSFOG00015027191) tamm41 (ENSSFOG00015001457) SYN2 (ENSSFOG00015001391) TIMP4 (ENSSFOG00015029651) PPARG (ENSSFOG00015001328) #18 ENSSFOG00015001374 tsen2 (ENSSFOG00015001309) #19 ENSSFOG00015001275 ENSSFOG00015001244 mkrn2 (ENSSFOG00015001191) #22 raf1b (ENSSFOG00015001166) #23 cnbpb (ENSSFOG00015031332) isy1 (ENSSFOG00015001127) ENSSFOG00015001099 rab43 (ENSSFOG00015032863) nuf2 (ENSSFOG00015001011) ENSSFOG00015000953 ENSSFOG00015000944 acad9 (ENSSFOG00015000925) IQSEC1 (ENSSFOG00015014615) ENSSFOG00015024488 hdac11 (ENSSFOG00015025218) FBLN2 (ENSSFOG00015014730) WNT7A (ENSSFOG00015014849) ptpdc1a (ENSSFOG00015014883) Clupeocephala ANCESTRAL SPECIES 20 ENSGT00550000074921 ENSGT00940000166500 ENSGT00940000157569 ENSGT00940000156027.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B.f ENSGT00390000000616 ENSGT00940000156062.m ENSGT00940000159798 ENSGT00940000167517 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00950000183041.A.a.a ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00390000004199 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915.f.b ENSGT00940000156308 ENSGT00940000156047.a ENSGT00940000158523.c.b ENSGT00940000164549.a.b ENSGT00940000160218 Otomorpha ANCESTRAL SPECIES 29 ENSGT00940000153541.D ENSGT00550000074921 ENSGT00940000166500 ENSGT00940000157569 ENSGT00940000156027.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B.f ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000167517 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A.a.a ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00390000004199 Otophysi ANCESTRAL SPECIES 247 ENSGT00390000007084 ENSGT00550000074921 ENSGT00940000166500 ENSGT00940000157569 ENSGT00940000156027.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B.f ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000167517 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A.a.a ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00390000004199 Characiphysae ANCESTRAL SPECIES 5 ENSGT00550000074921 ENSGT00940000166500 ENSGT00940000157569 ENSGT00940000156027.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B.f ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062.m ENSGT00940000167517 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A.a.a ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00390000004199 ENSGT00940000166256 ENSGT00940000166455 ENSGT00950000182952.C.g.b ENSGT00390000010053 ENSGT00940000159941 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238.a ENSGT00390000011897 Channel catfish MODERN SPECIES 13 gdf11 (ENSIPUG00000012483) iars (ENSIPUG00000012333) atp2b2 (ENSIPUG00000012098) slc6a11 (ENSIPUG00000012021) slc6a1 (ENSIPUG00000011974) hrh1 (ENSIPUG00000011966) atg7 (ENSIPUG00000011898) vgll4 (ENSIPUG00000011872) tamm41 (ENSIPUG00000011765) timp4 (ENSIPUG00000011732) syn2 (ENSIPUG00000011716) PPARG (ENSIPUG00000011668) #18 tsen2 (ENSIPUG00000011651) #19 MKRN2OS (ENSIPUG00000011647) #20 ENSIPUG00000011635 #20 mkrn2 (ENSIPUG00000011589) #22 raf1 (ENSIPUG00000011435) #23 ENSIPUG00000011418 Isy1 (ENSIPUG00000011379) zgc:77375 (ENSIPUG00000011342) RAB43 (ENSIPUG00000011323) nuf2 (ENSIPUG00000011256) shisa5 (ENSIPUG00000011229) atrip (ENSIPUG00000011138) si:dkey-42i9.4 (ENSIPUG00000011123) ippk (ENSIPUG00000011110) ecm2 (ENSIPUG00000011082) aspn (ENSIPUG00000011058) OMD (ENSIPUG00000011045) ogn (ENSIPUG00000011040) cenpp (ENSIPUG00000010997) Characiphysae_b ANCESTRAL SPECIES 8 ENSGT00550000074921 ENSGT00940000166500 ENSGT00940000157569 ENSGT00940000156027.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B.f ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000156062.m ENSGT00940000167517 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00950000183041.A.a.a ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00390000004199 ENSGT00940000166256 ENSGT00940000166455 ENSGT00950000182952.C.g.b ENSGT00390000010053 ENSGT00940000159941 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238.a ENSGT00390000011897 ENSGT00390000004860 Characoidei ANCESTRAL SPECIES 38 ENSGT00940000166500 ENSGT00550000074921 ENSGT00940000166043 ENSGT00390000002944 ENSGT00940000159517 ENSGT00950000183188.A.a.a ENSGT00940000158593.a ENSGT00390000016940.c.a.b ENSGT00390000015124 ENSGT00940000159798 ENSGT00940000167517 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A.a.a ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00390000004199 ENSGT00940000166256 ENSGT00940000166455 ENSGT00950000182952.C.g.b ENSGT00390000010053 ENSGT01030000235189 ENSGT00940000159941 ENSGT00940000157444 ENSGT00940000160986 ENSGT00940000157238.a Red-bellied piranha MODERN SPECIES 103 atp2b2 (ENSPNAG00000008513) iars1 (ENSPNAG00000008441) gdf11 (ENSPNAG00000008415) sarnp (ENSPNAG00000000975) cdk2 (ENSPNAG00000008407) pmela (ENSPNAG00000008382) MMP19 (ENSPNAG00000000896) ENSPNAG00000000887 timeless (ENSPNAG00000008298) syn2b (ENSPNAG00000000793) timp4.3 (ENSPNAG00000008221) PPARG (ENSPNAG00000008214) #18 tsen2 (ENSPNAG00000008203) #19 MKRN2OS (ENSPNAG00000008194) #20 ENSPNAG00000000758 #20 mkrn2 (ENSPNAG00000008184) #22 raf1b (ENSPNAG00000008167) #23 ENSPNAG00000008143 isy1 (ENSPNAG00000000703) zgc:77375 (ENSPNAG00000008127) rab43 (ENSPNAG00000000692) nuf2 (ENSPNAG00000000683) shisa10.1 (ENSPNAG00000000671) atrip (ENSPNAG00000008094) si:dkey-42i9.4 (ENSPNAG00000008076) ippk (ENSPNAG00000008073) cenpp (ENSPNAG00000000629) ECM2 (ENSPNAG00000008055) aspn (ENSPNAG00000008046) OMD (ENSPNAG00000006585) ogna (ENSPNAG00000029996) Mexicana tetra MODERN SPECIES 14 ENSAMXG00000041363 iars1 (ENSAMXG00000036265) gdf11 (ENSAMXG00000039058) sarnp (ENSAMXG00000004834) cdk2 (ENSAMXG00000030741) pmela (ENSAMXG00000006095) MMP19 (ENSAMXG00000006031) ENSAMXG00000036008 timeless (ENSAMXG00000005979) timp4.3 (ENSAMXG00000042051) syn2b (ENSAMXG00000032883) PPARG (ENSAMXG00000043041) #18 tsen2 (ENSAMXG00000043484) #19 MKRN2OS (ENSAMXG00000005712) #20 ENSAMXG00000038911 #20 mkrn2 (ENSAMXG00000005535) #22 raf1b (ENSAMXG00000005440) #23 ENSAMXG00000005433 isy1 (ENSAMXG00000005423) zgc:77375 (ENSAMXG00000029468) rab43 (ENSAMXG00000032172) nuf2 (ENSAMXG00000005348) shisa10.1 (ENSAMXG00000039145) atrip (ENSAMXG00000005302) si:dkey-42i9.4 (ENSAMXG00000005289) ENSAMXG00000041795 ippk (ENSAMXG00000033401) ENSAMXG00000034242 grm2b (ENSAMXG00000006790) rrp9 (ENSAMXG00000006788) ENSAMXG00000032725 Electric eel MODERN SPECIES 753 vgll4b (ENSEEEG00000014673) tamm41 (ENSEEEG00000014672) timp4.3 (ENSEEEG00000014670) SYN2 (ENSEEEG00000014669) ENSEEEG00000014668 PPARG (ENSEEEG00000014631) #18 tsen2 (ENSEEEG00000014628) #19 MKRN2OS (ENSEEEG00000014625) #20 mkrn2 (ENSEEEG00000014624) #22 Cyprinoidei ANCESTRAL SPECIES 131 ENSGT00940000166500 ENSGT00940000157569.l ENSGT00940000156027.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B.f ENSGT00390000000616 ENSGT00940000156062.m ENSGT00940000159798.g ENSGT00940000159798.h ENSGT00940000167517 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980.i.a ENSGT00390000004199 Cyprininae ANCESTRAL SPECIES 504 ENSGT00940000166500.a ENSGT00940000157569.l.a ENSGT00940000156027.b.a ENSGT00940000160690 ENSGT00390000017509.b ENSGT00390000003282.B.f.d ENSGT00390000000616 ENSGT00390000017509.a ENSGT00390000003282.B.f.c ENSGT00940000156062.m ENSGT00940000159798.g ENSGT00940000159798.h ENSGT00940000167517.d ENSGT00940000158273.b #18 ENSGT00390000013266 #19 ENSGT00950000183077.a.b #22 ENSGT00940000156084.s.b #23 ENSGT00950000183041.A.a.b.e.a ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980.i.a Cyprininae_a ANCESTRAL SPECIES 268 ENSGT00940000157262.m.a.d ENSGT00390000007084.l ENSGT00550000074921.a ENSGT00940000166500.b ENSGT00940000157569.k ENSGT00940000160690 ENSGT00390000017509.b ENSGT00390000003282.B.f.d.a ENSGT00390000000616 ENSGT00940000159798.g.b ENSGT00940000159798.h.a.b ENSGT00940000167517.d ENSGT00940000159798.h.b ENSGT00940000158273.b #18 ENSGT00390000013266 #19 ENSGT00950000183077.a.b #22 ENSGT00940000156084.s.b #23 ENSGT00950000183041.A.a.b.e.a ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980.i.a Golden-line barbel DUPLICATION Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 1558 ENSSGRG00000012198 ENSSGRG00000012199 TIMP4 (ENSSGRG00000012200) syn2b (ENSSGRG00000012203) PPARG (ENSSGRG00000012207) #18 mkrn2 (ENSSGRG00000012290) #22 mkrn2 (ENSSGRG00000012291) #22 raf1b (ENSSGRG00000012292) #23 ENSSGRG00000012293 #23 ENSSGRG00000012294 #23 cnbpb (ENSSGRG00000012295) isy1 (ENSSGRG00000012296) RAB43 (ENSSGRG00000012301) Golden-line barbel MODERN SPECIES 1558 ENSSGRG00000012198 ENSSGRG00000012199 TIMP4 (ENSSGRG00000012200) syn2b (ENSSGRG00000012203) PPARG (ENSSGRG00000012207) #18 mkrn2 (ENSSGRG00000012290) #22 mkrn2 (ENSSGRG00000012291) #22 raf1b (ENSSGRG00000012292) #23 ENSSGRG00000012293 #23 ENSSGRG00000012294 #23 cnbpb (ENSSGRG00000012295) isy1 (ENSSGRG00000012296) RAB43 (ENSSGRG00000012301) Golden-line barbel MODERN SPECIES 919 HRH1 (ENSSGRG00000036658) ATG7 (ENSSGRG00000036655) vgll4b (ENSSGRG00000036647) tamm41 (ENSSGRG00000036638) TIMP4 (ENSSGRG00000036637) TIMP4 (ENSSGRG00000036636) syn2b (ENSSGRG00000036635) PPARG (ENSSGRG00000036484) #18 ENSSGRG00000036469 ENSSGRG00000036468 #20 ENSSGRG00000036467 mkrn2 (ENSSGRG00000036465) #22 raf1b (ENSSGRG00000035606) #23 cnbpb (ENSSGRG00000035512) isy1 (ENSSGRG00000035398) zgc:77375 (ENSSGRG00000035392) rab43 (ENSSGRG00000035390) Common carp reference MODERN SPECIES 42 atp2b2 (ENSCCRG00000044404) SLC6A11 (ENSCCRG00000016659) slc6a1b (ENSCCRG00000016189) ENSCCRG00000075579 ENSCCRG00000072366 ENSCCRG00000068512 HRH1 (ENSCCRG00000082749) ATG7 (ENSCCRG00000073737) VGLL4 (ENSCCRG00000039243) tamm41 (ENSCCRG00000036889) ENSCCRG00000039284 TIMP4 (ENSCCRG00000069980) TIMP4 (ENSCCRG00000060473) PPARG (ENSCCRG00000029641) #18 tsen2 (ENSCCRG00000029639) #19 mkrn2 (ENSCCRG00000029638) #22 raf1b (ENSCCRG00000029621) #23 cnbpb (ENSCCRG00000071758) isy1 (ENSCCRG00000053267) zgc:77375 (ENSCCRG00000078156) rab43 (ENSCCRG00000023130) znf831 (ENSCCRG00000021373) pdrg1 (ENSCCRG00000025072) ENSCCRG00000081475 phactr3b (ENSCCRG00000001436) acot8 (ENSCCRG00000079671) srsf6b (ENSCCRG00000073658) ift52 (ENSCCRG00000038783) mybl2b (ENSCCRG00000004062) ENSCCRG00000018170 ENSCCRG00000068236 Goldfish MODERN SPECIES 29 ENSCARG00000021281 ENSCARG00000021300 ENSCARG00000021306 ENSCARG00000021318 npffl (ENSCARG00000021332) SLC11A2 (ENSCARG00000021353) avil (ENSCARG00000021483) HRH1 (ENSCARG00000021671) ATG7 (ENSCARG00000021718) vgll4b (ENSCARG00000022145) tamm41 (ENSCARG00000022168) syn2b (ENSCARG00000022229) TIMP4 (ENSCARG00000023678) PPARG (ENSCARG00000023697) #18 tsen2 (ENSCARG00000023895) #19 mkrn2 (ENSCARG00000023910) #22 raf1b (ENSCARG00000023947) #23 cnbpb (ENSCARG00000023990) isy1 (ENSCARG00000024022) zgc:77375 (ENSCARG00000024081) rab43 (ENSCARG00000024098) ENSCARG00000024104 ttll7 (ENSCARG00000024108) prkacba (ENSCARG00000024140) samd13 (ENSCARG00000024207) uox (ENSCARG00000024219) rpf1 (ENSCARG00000024311) SPATA1 (ENSCARG00000024838) ctbs (ENSCARG00000024868) agtrap (ENSCARG00000024891) PANK4 (ENSCARG00000024915) Zebrafish MODERN SPECIES 2 iars1 (ENSDARG00000007955) atp2b2 (ENSDARG00000063433) SLC6A11 (ENSDARG00000087981) slc6a1b (ENSDARG00000039647) ATG7 (ENSDARG00000102893) tamm41 (ENSDARG00000100157) vgll4b (ENSDARG00000103730) timp4.3 (ENSDARG00000100795) timp4.2 (ENSDARG00000102617) TIMP4 (ENSDARG00000111805) syn2b (ENSDARG00000101054) pparg (ENSDARG00000031848) tsen2 (ENSDARG00000091851) #19 MKRN2OS (ENSDARG00000100728) #20 ENSDARG00000086655 #20 mkrn2 (ENSDARG00000007630) #22 ENSDARG00000105417 raf1b (ENSDARG00000059406) #23 cnbpb (ENSDARG00000070922) isy1 (ENSDARG00000063466) zgc:77375 (ENSDARG00000004282) rab43 (ENSDARG00000059404) nuf2 (ENSDARG00000034624) znf831 (ENSDARG00000074906) ENSDARG00000109591 pdrg1 (ENSDARG00000045017) cyp27b1 (ENSDARG00000045015) POC1A (ENSDARG00000078533) mettl1 (ENSDARG00000076518) slc11a2 (ENSDARG00000024295) npffl (ENSDARG00000045016) Clupeiformes ANCESTRAL SPECIES 214 ENSGT00940000153541.D ENSGT00550000074921 ENSGT00940000166500 ENSGT00940000157569 ENSGT00940000156027.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B.f ENSGT00390000000616 ENSGT00940000159798 ENSGT00940000167517 ENSGT00940000158273 #18 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A.a.a Atlantic herring MODERN SPECIES 21 tnnc1a (ENSCHAG00000019978) iars1 (ENSCHAG00000019757) atp2b2 (ENSCHAG00000019399) SLC6A11 (ENSCHAG00000018702) slc6a1b (ENSCHAG00000017782) HRH1 (ENSCHAG00000017743) ATG7 (ENSCHAG00000017457) vgll4b (ENSCHAG00000017431) tamm41 (ENSCHAG00000017413) timp4.2 (ENSCHAG00000017406) syn2b (ENSCHAG00000015897) PPARG (ENSCHAG00000015643) #18 tsen2 (ENSCHAG00000015557) #19 MKRN2OS (ENSCHAG00000015545) #20 ENSCHAG00000015536 #20 mkrn2 (ENSCHAG00000015498) #22 raf1b (ENSCHAG00000015158) #23 ENSCHAG00000014985 gng8 (ENSCHAG00000014964) tmem45b (ENSCHAG00000014956) emc3 (ENSCHAG00000014853) ENSCHAG00000010466 ENSCHAG00000010316 fancd2 (ENSCHAG00000009730) tex264a (ENSCHAG00000009710) GRM2 (ENSCHAG00000009645) parp3 (ENSCHAG00000009559) ENSCHAG00000009554 ENSCHAG00000009548 CAV3 (ENSCHAG00000009540) oxtra (ENSCHAG00000009498) Denticle herring MODERN SPECIES 3 iars1 (ENSDCDG00000034943) atp2b2 (ENSDCDG00000034974) SLC6A11 (ENSDCDG00000035032) slc6a1b (ENSDCDG00000035164) HRH1 (ENSDCDG00000035297) ATG7 (ENSDCDG00000035327) vgll4b (ENSDCDG00000035408) tamm41 (ENSDCDG00000035411) syn2b (ENSDCDG00000035419) tamm41 (ENSDCDG00000016077) timp4.2 (ENSDCDG00000016082) PPARG (ENSDCDG00000016087) #18 tsen2 (ENSDCDG00000016127) #19 MKRN2OS (ENSDCDG00000016136) #20 ENSDCDG00000016138 #20 mkrn2 (ENSDCDG00000016143) #22 raf1b (ENSDCDG00000016216) #23 ENSDCDG00000016645 emc3 (ENSDCDG00000016651) ENSDCDG00000016718 gpx1a (ENSDCDG00000020953) ENSDCDG00000020954 fancd2 (ENSDCDG00000020972) tex264a (ENSDCDG00000021219) GRM2 (ENSDCDG00000021222) stk35l (ENSDCDG00000021227) bin2b (ENSDCDG00000021235) ITGA5 (ENSDCDG00000021357) slc48a1b (ENSDCDG00000026820) ENSDCDG00000026821 HDAC7 (ENSDCDG00000026829) Euteleosteomorpha ANCESTRAL SPECIES 5 ENSGT00550000074921 ENSGT00940000166500 ENSGT00940000157569 ENSGT00940000156027.b ENSGT00940000160690 ENSGT00390000017509 ENSGT00390000003282.B.f ENSGT00390000000616 ENSGT00940000156062.m ENSGT00940000159798 ENSGT00940000167517 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00950000183041.A.a.a ENSGT00390000014109 ENSGT00940000164112.b ENSGT00940000161980 ENSGT00390000004199 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915.f.b ENSGT00940000156308 ENSGT00940000156047.a ENSGT00940000158523.c.b ENSGT00940000164549.a.b ENSGT00940000160218 Protacanthopterygii ANCESTRAL SPECIES 95 ENSGT00940000167517.a ENSGT00940000159798 ENSGT00940000156062.m ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00950000183041.A.a.a ENSGT00390000014109 ENSGT00390000004199 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915.f.b ENSGT00940000156308 ENSGT00940000156047.a ENSGT00940000158523.c.b ENSGT00940000164549.a.b ENSGT00940000160218 ENSGT00940000158148 ENSGT00530000063168.a.a.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 400 ENSGT00940000158273.n #18 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b.s #22 ENSGT00940000156084.b #23 ENSGT00950000183041.A.a.a.a ENSGT00390000014109 ENSGT00940000164112.a.l ENSGT00940000161980 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000156915.f.b ENSGT00940000156308 ENSGT00940000156047.a.b ENSGT00940000158523.c.b ENSGT00940000164549.a.b ENSGT00940000160218.i ENSGT00940000158148.e Salmoninae_a ANCESTRAL SPECIES 78 ENSGT00940000158273.n #18 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b.s #22 ENSGT00940000156084.b #23 ENSGT00950000183041.A.a.a.a.b ENSGT00940000164112.a.l ENSGT00940000161980 ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000156915.f.b ENSGT00940000156308 ENSGT00940000156047.a.a.a ENSGT00940000158523.c.b ENSGT00940000164549.a.b ENSGT00940000160218.i ENSGT00940000158148.e ENSGT00530000063168.a.a.a.e Salmo ANCESTRAL SPECIES 61 ENSGT00940000158273.n #18 ENSGT00390000013266 #19 ENSGT01030000235208 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b.s #22 ENSGT00940000156084.b #23 ENSGT00950000183041.A.a.a.a.b ENSGT00940000164112.a.l ENSGT00940000161980 ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000156915.f.b ENSGT00940000156308 ENSGT00940000156047.a.b ENSGT00940000158523.c.b ENSGT00940000164549.a.b ENSGT00940000160218.i ENSGT00940000158148.e ENSGT00530000063168.a.a.a.e ENSGT00950000183008.a.a.a.a River trout MODERN SPECIES 7 PPARG (ENSSTUG00000034013) #18 tsen2 (ENSSTUG00000034204) #19 ENSSTUG00000034229 MKRN2OS (ENSSTUG00000034234) #20 mkrn2 (ENSSTUG00000034245) #22 raf1b (ENSSTUG00000034296) #23 ENSSTUG00000034948 zgc:77375 (ENSSTUG00000034964) rab43 (ENSSTUG00000034972) ENSSTUG00000034973 ENSSTUG00000034976 ENSSTUG00000034980 EFCC1 (ENSSTUG00000034995) ENSSTUG00000035002 IQSEC1 (ENSSTUG00000035075) hdac11 (ENSSTUG00000035494) ENSSTUG00000035774 ENSSTUG00000035792 wnt7aa (ENSSTUG00000036082) ENSSTUG00000036095 Atlantic salmon MODERN SPECIES 14 PPARG (ENSSSAG00000029040) #18 tsen2 (ENSSSAG00000028772) #19 mkrn2os (ENSSSAG00000028619) #20 mkrn2 (ENSSSAG00000028437) #22 raf1b (ENSSSAG00000015667) #23 ENSSSAG00000008850 zgc:77375 (ENSSSAG00000084248) rab43 (ENSSSAG00000117714) ENSSSAG00000008818 ENSSSAG00000091562 ENSSSAG00000008800 IQSEC1 (ENSSSAG00000009162) ENSSSAG00000121382 hdac11 (ENSSSAG00000008746) FBLN2 (ENSSSAG00000008760) ENSSSAG00000064612 ptpdc1a (ENSSSAG00000008674) barx1 (ENSSSAG00000114886) ENSSSAG00000083877 Oncorhynchus ANCESTRAL SPECIES 81 ENSGT00940000158273.n #18 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b.s #22 ENSGT00950000183041.A.a.a.a.b ENSGT00940000164112.a.l ENSGT00940000161980 ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000156915.f.b ENSGT00940000156308 ENSGT00940000156047.a.b ENSGT01040000241044 ENSGT00940000158523.c.b ENSGT00940000164549.a.b ENSGT00940000160218.i ENSGT00940000158148.e ENSGT00530000063168.a.a.a.f.a ENSGT00950000183008.a.a.a.a Rainbow trout MODERN SPECIES 28 ENSOMYG00000068585 barx1 (ENSOMYG00000006021) ptpdc1a (ENSOMYG00000006063) ENSOMYG00000071314 ENSOMYG00000074785 ENSOMYG00000058266 FBLN2 (ENSOMYG00000056000) HDAC11 (ENSOMYG00000006191) IQSEC1 (ENSOMYG00000006284) ENSOMYG00000052537 ENSOMYG00000062142 PPARG (ENSOMYG00000006827) #18 ENSOMYG00000053804 ENSOMYG00000006513 ENSOMYG00000006499 #20 mkrn2 (ENSOMYG00000006467) #22 ENSOMYG00000006436 ENSOMYG00000059639 zgc:77375 (ENSOMYG00000006359) ENSOMYG00000066321 rab43 (ENSOMYG00000006335) ENSOMYG00000023229 ENSOMYG00000006946 Oncorhynchus_a ANCESTRAL SPECIES 95 ENSGT00940000158273.n #18 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b.s #22 ENSGT00950000183041.A.a.a.a.b ENSGT00940000164112.a.l ENSGT00940000161980 ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000156915.f.b ENSGT00940000156308 ENSGT00940000156047.a.b ENSGT01040000241044 ENSGT00940000158523.c.b ENSGT00940000164549.a.b ENSGT00940000160218.i ENSGT00940000158148.e ENSGT00530000063168.a.a.a.f.a ENSGT01010000229826 Coho salmon MODERN SPECIES 25 ENSOKIG00005000199 PPARG (ENSOKIG00005000160) #18 ENSOKIG00005000081 TSEN2 (ENSOKIG00005000064) #19 MKRN2OS (ENSOKIG00005000038) #20 ENSOKIG00005028181 mkrn2 (ENSOKIG00005028154) #22 ENSOKIG00005028124 zgc:77375 (ENSOKIG00005028061) rab43 (ENSOKIG00005028040) ENSOKIG00005028031 ENSOKIG00005027979 IQSEC1 (ENSOKIG00005027932) hdac11 (ENSOKIG00005027857) FBLN2 (ENSOKIG00005027579) ENSOKIG00005027544 WNT7A (ENSOKIG00005027513) ptpdc1a (ENSOKIG00005027491) barx1 (ENSOKIG00005027461) ENSOKIG00005027442 ENSOKIG00005027435 ENSOKIG00005027400 Chinook salmon MODERN SPECIES 736 mkrn2 (ENSOTSG00005038617) #22 ENSOTSG00005038616 zgc:77375 (ENSOTSG00005038615) rab43 (ENSOTSG00005038614) Salmoninae ANCESTRAL SPECIES ENSGT00950000183077.a.b.t #22 Salmoninae_a ANCESTRAL SPECIES 182 ENSGT00940000157562.q.a.b.b.a.b ENSGT00940000161921.e.a.a ENSGT00940000154543.d ENSGT00940000161664 ENSGT00910000144253 ENSGT00940000158148.f.b ENSGT00940000158148.f.a.b ENSGT00940000160218.j ENSGT00940000157312 ENSGT00390000004199 ENSGT00950000183041.A.a.a.a.a ENSGT00390000014109 ENSGT00950000183077.a.b.t #22 Oncorhynchus ANCESTRAL SPECIES 154 ENSGT00940000154543.d ENSGT00940000161664 ENSGT00910000144253 ENSGT00940000158148.f.a.b ENSGT00940000160218.j ENSGT00940000157312 ENSGT00390000004199 ENSGT00950000183041.A.a.a.a.a ENSGT00390000014109 ENSGT00950000183077.a.b.t #22 ENSGT00940000159798 ENSGT00940000156062.m Oncorhynchus_a ANCESTRAL SPECIES 200 ENSGT00940000154543.d ENSGT00940000161664 ENSGT00910000144253 ENSGT00940000158148.f.a.b ENSGT00940000160218.j ENSGT00940000157312 ENSGT00390000004199 ENSGT00950000183041.A.a.a.a.a ENSGT00390000014109 ENSGT00950000183077.a.b.t #22 ENSGT00940000159798 ENSGT00940000156062.m Coho salmon MODERN SPECIES ENSOKIG00005000082 ENSOKIG00005000092 ENSOKIG00005000104 cstf1 (ENSOKIG00005000120) ENSOKIG00005000131 phf2 (ENSOKIG00005000186) barx1 (ENSOKIG00005000224) acad9 (ENSOKIG00005000286) ENSOKIG00005000370 nuf2 (ENSOKIG00005000381) ENSOKIG00005000403 isy1 (ENSOKIG00005000418) mkrn2 (ENSOKIG00005000432) #22 ENSOKIG00005000445 SYN2 (ENSOKIG00005000511) TIMP4 (ENSOKIG00005000693) HRH1 (ENSOKIG00005000701) SLC6A1 (ENSOKIG00005000721) ENSOKIG00005000824 ENSOKIG00005000924 ENSOKIG00005000930 ENSOKIG00005000931 DUSP7 (ENSOKIG00005000938) alas1 (ENSOKIG00005000942) ENSOKIG00005000951 ENSOKIG00005000953 ippk (ENSOKIG00005000957) ECM2 (ENSOKIG00005000970) Chinook salmon MODERN SPECIES 2988 ENSOTSG00005032519 isy1 (ENSOTSG00005032518) mkrn2 (ENSOTSG00005032516) #22 TIMP4 (ENSOTSG00005032515) ENSOTSG00005032514 Rainbow trout MODERN SPECIES 8 ENSOMYG00000006447 ENSOMYG00000054602 ENSOMYG00000062813 ENSOMYG00000068603 ENSOMYG00000069337 ENSOMYG00000007439 ENSOMYG00000048657 ENSOMYG00000059887 ENSOMYG00000007491 ENSOMYG00000062213 ENSOMYG00000064348 ENSOMYG00000007669 ENSOMYG00000007354 ENSOMYG00000007339 ENSOMYG00000007313 ENSOMYG00000007246 #22 ENSOMYG00000007232 ENSOMYG00000006901 ENSOMYG00000006350 ENSOMYG00000006375 il10b (ENSOMYG00000071035) ENSOMYG00000076915 ENSOMYG00000006266 ENSOMYG00000006110 pdhb (ENSOMYG00000006083) kctd6a (ENSOMYG00000050807) ccdc71 (ENSOMYG00000006044) ENSOMYG00000070695 stab1 (ENSOMYG00000005799) ENSOMYG00000048480 OGN (ENSOMYG00000005564) Salmo ANCESTRAL SPECIES 124 ENSGT00390000003224.A ENSGT00940000157660.k.b ENSGT00950000183124.A.g ENSGT00390000004207 ENSGT00940000157562.q.a.a.a ENSGT00940000161921.e.a.a ENSGT00940000154543.d ENSGT00940000161664 ENSGT00910000144253 ENSGT00940000158148.f.b ENSGT00940000160218.j ENSGT00940000157312 ENSGT00390000004199 ENSGT00950000183041.A.a.a.a.a ENSGT00390000014109 ENSGT00950000183077.a.b.t #22 ENSGT00940000156062.m ENSGT00940000159798 River trout MODERN SPECIES 5 acot8 (ENSSTUG00000002194) ENSSTUG00000002210 phactr3b (ENSSTUG00000002219) PPP1R3D (ENSSTUG00000002222) ENSSTUG00000002235 ENSSTUG00000002241 ENSSTUG00000002247 cstf1 (ENSSTUG00000002259) phf2 (ENSSTUG00000002295) ENSSTUG00000002653 barx1 (ENSSTUG00000002661) acad9 (ENSSTUG00000002696) nuf2 (ENSSTUG00000002880) ENSSTUG00000002897 isy1 (ENSSTUG00000002939) mkrn2 (ENSSTUG00000002950) #22 ENSSTUG00000002981 ENSSTUG00000002984 ENSSTUG00000003006 SYN2 (ENSSTUG00000003068) TIMP4 (ENSSTUG00000003488) ube2j2 (ENSSTUG00000003500) ENSSTUG00000003537 ENSSTUG00000003558 IP6K1 (ENSSTUG00000003604) lmcd1 (ENSSTUG00000003651) AMIGO3 (ENSSTUG00000003671) ENSSTUG00000003676 GRM7 (ENSSTUG00000003695) dag1 (ENSSTUG00000003927) ENSSTUG00000003934 Atlantic salmon MODERN SPECIES 3 ENSSSAG00000111615 ENSSSAG00000094320 ENSSSAG00000060326 phactr3b (ENSSSAG00000086139) ENSSSAG00000068209 ENSSSAG00000098714 ENSSSAG00000084297 cstf1 (ENSSSAG00000068210) ENSSSAG00000090909 ENSSSAG00000092711 ENSSSAG00000113943 ENSSSAG00000082361 ENSSSAG00000039665 ENSSSAG00000083469 ENSSSAG00000091386 ENSSSAG00000039252 #22 ENSSSAG00000039204 ENSSSAG00000100229 ENSSSAG00000038561 ENSSSAG00000090363 Huchen MODERN SPECIES 5701 mkrn2 (ENSHHUG00000031482) #22 Northern pike MODERN SPECIES 1 syn2b (ENSELUG00000013135) timp4.3 (ENSELUG00000028743) PPARG (ENSELUG00000013192) #18 tsen2 (ENSELUG00000013262) #19 MKRN2OS (ENSELUG00000013278) #20 ENSELUG00000013290 #20 mkrn2 (ENSELUG00000013320) #22 raf1b (ENSELUG00000013381) #23 ENSELUG00000013402 isy1 (ENSELUG00000000489) zgc:77375 (ENSELUG00000013454) rab43 (ENSELUG00000013468) nuf2 (ENSELUG00000013487) ENSELUG00000013517 ENSELUG00000013547 acad9 (ENSELUG00000013607) IQSEC1 (ENSELUG00000013644) hdac11 (ENSELUG00000026940) ENSELUG00000030211 FBLN2 (ENSELUG00000013779) wnt7aa (ENSELUG00000013813) ptpdc1a (ENSELUG00000013847) Acanthomorphata ANCESTRAL SPECIES 299 ENSGT00940000178764 ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00950000183041.A.a.a ENSGT00390000014109 ENSGT00940000164112.b Euacanthomorphacea ANCESTRAL SPECIES 95 ENSGT00940000165482 ENSGT00940000160586 ENSGT00940000162210 ENSGT00940000160611 ENSGT00940000155740 ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00950000183041.A.a.a ENSGT00390000014109 ENSGT00940000164112.b ENSGT00390000016206 ENSGT00510000047836 ENSGT00550000074975 ENSGT00930000150941 ENSGT00940000153725.a.a ENSGT00730000111020.b.b ENSGT00940000169138 ENSGT00940000155052 ENSGT01100000264229 ENSGT00550000074997 ENSGT00880000138014.b ENSGT01100000263545.a.b.d.b Percomorphaceae ANCESTRAL SPECIES 33 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000178492 ENSGT00940000171658 ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000176933 Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00940000178764 ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00940000171658 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.a.a.a.a.a.a.a ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a Ovalentaria ANCESTRAL SPECIES 2 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT01030000235208 ENSGT00940000178764 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00940000171658 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.a.a.a.a.a.a.a ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a Atherinomorphae ANCESTRAL SPECIES 29 ENSGT00940000158222 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT01030000235208 ENSGT00940000178764 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00940000171658 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.a.a.a.a.a.a.a ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a Cyprinodontiformes ANCESTRAL SPECIES 2 ENSGT00940000158222 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT01030000235208 ENSGT00940000178764 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00970000193381.a.a.a.a.a.a.a.c ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00390000018547 Aplocheiloidei ANCESTRAL SPECIES 131 ENSGT00940000160093.a ENSGT00700000104550.a.i ENSGT00880000138014.b ENSGT00940000155052 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00390000014109 ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 Mangrove rivulus MODERN SPECIES 1430 mkrn2 (ENSKMAG00000001201) #22 Turquoise killifish MODERN SPECIES 1619 AMIGO3 (ENSNFUG00015006745) ALDH4A1 (ENSNFUG00015006811) ASCL5 (ENSNFUG00015007429) ENSNFUG00015007435 polr2j (ENSNFUG00015007439) DNTTIP1 (ENSNFUG00015007451) PCIF1 (ENSNFUG00015007469) HDHD5 (ENSNFUG00015007526) isy1 (ENSNFUG00015007544) si:ch211-15p9.2 (ENSNFUG00015007591) rbm39a (ENSNFUG00015007623) ENSNFUG00015007827 ENSNFUG00015007831 #19 ENSNFUG00015007840 ENSNFUG00015007845 MKRN2 (ENSNFUG00015007849) #22 FAM107A (ENSNFUG00015007856) PIK3C2B (ENSNFUG00015008056) ube2c (ENSNFUG00015010008) zgc:109913 (ENSNFUG00015010026) CABZ01041604.1 (ENSNFUG00015010036) ENSNFUG00015010053 SNRPB (ENSNFUG00015010061) ctsa (ENSNFUG00015010162) KCNQ2 (ENSNFUG00015010920) ddx27 (ENSNFUG00015012929) ENSNFUG00015013012 ENSNFUG00015013016 KHK (ENSNFUG00015013047) ENSNFUG00015013163 SH2D5 (ENSNFUG00015013175) Cyprinodontoidei ANCESTRAL SPECIES 46 ENSGT00940000169138 ENSGT00940000158222 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00940000178764 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00970000193381.a.a.a.a.a.a.a.c.a.a ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00390000018547 NAME_4 ANCESTRAL SPECIES 174 ENSGT00880000138014.b ENSGT00940000155052 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00940000178764 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00940000155781.d ENSGT00950000183146.b.b ENSGT00940000155781.c ENSGT01030000234648.a.a.c.a Mummichog MODERN SPECIES 503 ctsa (ENSFHEG00000006517) ENSFHEG00000006534 ENSFHEG00000006541 zgc:109913 (ENSFHEG00000006579) ube2c (ENSFHEG00000006609) polr2j (ENSFHEG00000006625) DNTTIP1 (ENSFHEG00000006633) pcif1 (ENSFHEG00000006684) ENSFHEG00000006713 ENSFHEG00000006722 isy1 (ENSFHEG00000006776) si:ch211-15p9.2 (ENSFHEG00000006787) rbm39a (ENSFHEG00000006810) ENSFHEG00000006845 #19 ENSFHEG00000006865 #20 mkrn2 (ENSFHEG00000006905) #22 FAM107A (ENSFHEG00000006916) PIK3C2B (ENSFHEG00000006934) ENSFHEG00000006939 ENSFHEG00000006950 aldh4a1 (ENSFHEG00000006971) RNF123 (ENSFHEG00000007126) AMIGO3 (ENSFHEG00000007168) RNF123 (ENSFHEG00000007212) Sheepshead minnow MODERN SPECIES 1562 ENSCVAG00000014186 SNRPN (ENSCVAG00000014193) ENSCVAG00000014201 zgc:109913 (ENSCVAG00000014207) ube2c (ENSCVAG00000014248) polr2j (ENSCVAG00000014267) DNTTIP1 (ENSCVAG00000014288) pcif1 (ENSCVAG00000014332) HDHD5 (ENSCVAG00000014343) isy1 (ENSCVAG00000000650) si:ch211-15p9.2 (ENSCVAG00000014360) rbm39a (ENSCVAG00000014408) tsen2 (ENSCVAG00000014431) #19 ENSCVAG00000014442 ENSCVAG00000014450 #20 mkrn2 (ENSCVAG00000014456) #22 Poeciliinae ANCESTRAL SPECIES 31 ENSGT00880000138014.b ENSGT00940000155052 ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00970000193381.a.a.a.a.a.a.a.c.a.a.b.b.b.a.a ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g.c ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00390000018547 Poecilia ANCESTRAL SPECIES 25 ENSGT00700000104550.a.i ENSGT00880000138014.b ENSGT00940000155052 ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00390000014109 ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00940000171658 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.a.a.a.a.a.a.a.c.a.a.b.b.b.a.a ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g.c ENSGT00970000193381.a.a.a.a.a.a.a.c.a.a.b.a.b.b ENSGT00940000160561 NAME_6 ANCESTRAL SPECIES 313 ENSGT00700000104550.a.i ENSGT00880000138014.b ENSGT00940000155052 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00940000169528 Sailfin molly MODERN SPECIES 2157 ctsa (ENSPLAG00000014159) snrpb (ENSPLAG00000014130) ENSPLAG00000014116 zgc:109913 (ENSPLAG00000014104) ube2c (ENSPLAG00000014090) polr2j (ENSPLAG00000014075) DNTTIP1 (ENSPLAG00000014059) ENSPLAG00000014051 gjb9a (ENSPLAG00000000325) pcif1 (ENSPLAG00000014011) HDHD5 (ENSPLAG00000014001) si:ch211-15p9.2 (ENSPLAG00000013942) rbm39a (ENSPLAG00000013925) tsen2 (ENSPLAG00000013787) #19 MKRN2OS (ENSPLAG00000013778) #20 mkrn2 (ENSPLAG00000013770) #22 ENSPLAG00000013755 Amazon molly MODERN SPECIES 973 ENSPFOG00000023022 ctsa (ENSPFOG00000011676) snrpb (ENSPFOG00000011802) ENSPFOG00000011876 zgc:109913 (ENSPFOG00000011902) ube2c (ENSPFOG00000011928) polr2j (ENSPFOG00000012001) DNTTIP1 (ENSPFOG00000012022) pcif1 (ENSPFOG00000012161) si:ch211-15p9.2 (ENSPFOG00000012286) rbm39a (ENSPFOG00000012350) tsen2 (ENSPFOG00000012459) #19 MKRN2OS (ENSPFOG00000012536) #20 mkrn2 (ENSPFOG00000012571) #22 Guppy MODERN SPECIES 457 ahcy (ENSPREG00000020799) CHMP4B (ENSPREG00000020817) ENSPREG00000020839 ENSPREG00000020850 ENSPREG00000020864 mych (ENSPREG00000020875) ergic3 (ENSPREG00000020899) romo1 (ENSPREG00000020948) smpd4 (ENSPREG00000020995) rbm39a (ENSPREG00000021088) ENSPREG00000021166 MKRN2OS (ENSPREG00000021189) #20 mkrn2 (ENSPREG00000021199) #22 FAM107A (ENSPREG00000021220) PIK3C2B (ENSPREG00000021267) ENSPREG00000021293 ASCL5 (ENSPREG00000021303) aldh4a1 (ENSPREG00000021317) ENSPREG00000021340 ENSPREG00000021351 ENSPREG00000021366 AMIGO3 (ENSPREG00000021377) ENSPREG00000021406 GRM7 (ENSPREG00000021434) ENSPREG00000021445 ENSPREG00000021448 ENSPREG00000021456 nicn1 (ENSPREG00000021466) Platyfish MODERN SPECIES 12 ctsa (ENSXMAG00000012347) snrpb (ENSXMAG00000028767) ENSXMAG00000012378 ENSXMAG00000021148 zgc:109913 (ENSXMAG00000012402) ube2c (ENSXMAG00000012406) polr2j (ENSXMAG00000012422) DNTTIP1 (ENSXMAG00000023667) pcif1 (ENSXMAG00000012427) ENSXMAG00000012443 isy1 (ENSXMAG00000012452) si:ch211-15p9.2 (ENSXMAG00000012458) rbm39a (ENSXMAG00000012463) tsen2 (ENSXMAG00000012479) #19 MKRN2OS (ENSXMAG00000012504) #20 mkrn2 (ENSXMAG00000012508) #22 ENSXMAG00000028757 FAM107A (ENSXMAG00000012529) PIK3C2B (ENSXMAG00000012532) ENSXMAG00000027726 ASCL5 (ENSXMAG00000024316) aldh4a1 (ENSXMAG00000012583) AMIGO3 (ENSXMAG00000010901) RNF123 (ENSXMAG00000012608) ENSXMAG00000026990 ENSXMAG00000028609 GRM7 (ENSXMAG00000015698) nicn1 (ENSXMAG00000024537) dag1 (ENSXMAG00000012250) pcbp4 (ENSXMAG00000015709) GDF5 (ENSXMAG00000012227) Oryzias ANCESTRAL SPECIES 1 ENSGT00940000153456.b.b ENSGT00590000083094.a.a.c.a.a ENSGT00940000160100 ENSGT00940000155048.d.a ENSGT00390000018852 ENSGT00940000157446 ENSGT00940000165995 ENSGT01020000230394.e.a.a.b.a.a.b.a.a ENSGT00940000158854 ENSGT01030000234623.a.a.a.a.a ENSGT00390000004199 ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT00940000164258 ENSGT00940000160913 ENSGT00940000154543.d ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 Oryzias_a ANCESTRAL SPECIES 5 ENSGT00940000153456.b.b ENSGT00590000083094.a.a.c.a.a ENSGT00940000160100 ENSGT00940000155048.d.a ENSGT00390000018852 ENSGT00940000157446 ENSGT00940000165995 ENSGT01020000230394.e.a.a.b.a.a.b.a.a ENSGT00940000158854 ENSGT01030000234623.a.a.a.a.a ENSGT00390000004199 ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT00940000164258 ENSGT00940000160913 ENSGT00940000154543.d ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 Chinese medaka MODERN SPECIES 957 LDLRAD2 (ENSOSIG00000023668) nampt2 (ENSOSIG00000023651) ENSOSIG00000023057 fezf2 (ENSOSIG00000022742) ptprga (ENSOSIG00000022739) MTMR14 (ENSOSIG00000022711) ENSOSIG00000022648 si:dkey-19e4.5 (ENSOSIG00000022644) ENSOSIG00000022563 SERINC3 (ENSOSIG00000022334) nuf2 (ENSOSIG00000022287) si:ch211-15p9.2 (ENSOSIG00000022285) rbm39a (ENSOSIG00000022280) ENSOSIG00000022276 #19 MKRN2OS (ENSOSIG00000022275) #20 mkrn2 (ENSOSIG00000022273) #22 ENSOSIG00000022271 FAM107A (ENSOSIG00000022270) PTPRT (ENSOSIG00000017976) zgc:171566 (ENSOSIG00000017642) GRIP2 (ENSOSIG00000017297) slc6a6b (ENSOSIG00000012583) LSM3 (ENSOSIG00000012559) ENSOSIG00000012557 RIMS4 (ENSOSIG00000012556) ENSOSIG00000012555 aldh1l1 (ENSOSIG00000007822) ENSOSIG00000007789 pdrg1 (ENSOSIG00000007788) ENSOSIG00000007784 ENSOSIG00000007783 Japanese Medaka HdrR MODERN SPECIES 19 ENSORLG00000010190 fezf2 (ENSORLG00000010156) ENSORLG00000023114 ptprga (ENSORLG00000010143) MTMR14 (ENSORLG00000010139) ENSORLG00000010116 si:dkey-19e4.5 (ENSORLG00000010093) ENSORLG00000010071 ENSORLG00000009973 SERINC3 (ENSORLG00000009959) nuf2 (ENSORLG00000009929) si:ch211-15p9.2 (ENSORLG00000022741) rbm39a (ENSORLG00000009919) ENSORLG00000026661 #19 MKRN2OS (ENSORLG00000025591) #20 mkrn2 (ENSORLG00000009824) #22 ENSORLG00000023811 PTPRT (ENSORLG00000009770) zgc:171566 (ENSORLG00000009641) ENSORLG00000025197 GRIP2 (ENSORLG00000009623) ENSORLG00000009579 LSM3 (ENSORLG00000025900) ENSORLG00000009523 ENSORLG00000009518 ENSORLG00000009508 aldh1l1 (ENSORLG00000009492) ENSORLG00000030548 pdrg1 (ENSORLG00000021999) ENSORLG00000027924 ENSORLG00000027242 Oryzias_b ANCESTRAL SPECIES 3 ENSGT00590000083094.a.a.c.a.a ENSGT00940000160100 ENSGT00940000155048.d.a ENSGT00390000018852 ENSGT00940000157446 ENSGT00940000165995 ENSGT01020000230394.e.a.a.b.a.a.b.a.a ENSGT00940000158854 ENSGT00940000172289 ENSGT01030000234623.a.a.a.a.a ENSGT00390000004199 ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000155326.b ENSGT00490000043388.b.a ENSGT00940000155615.i.a ENSGT00940000154583.e.a ENSGT00390000013951 ENSGT00940000166055 ENSGT00940000158934 ENSGT00940000164258 ENSGT00940000160913 ENSGT00940000154543.d ENSGT00390000013253 ENSGT00950000183053.C.a ENSGT00940000161664 ENSGT00910000144253 Javanese ricefish MODERN SPECIES 19 ENSOJAG00000018501 fezf2 (ENSOJAG00000019416) ptprga (ENSOJAG00000019432) MTMR14 (ENSOJAG00000019586) ENSOJAG00000020540 si:dkey-19e4.5 (ENSOJAG00000020554) ENSOJAG00000020618 ENSOJAG00000021007 SERINC3 (ENSOJAG00000021032) ENSOJAG00000021378 nuf2 (ENSOJAG00000021383) si:ch211-15p9.2 (ENSOJAG00000021403) rbm39a (ENSOJAG00000021406) tsen2 (ENSOJAG00000021525) #19 MKRN2OS (ENSOJAG00000021535) #20 mkrn2 (ENSOJAG00000021537) #22 ENSOJAG00000021557 ENSOJAG00000021558 FAM107A (ENSOJAG00000021577) PTPRT (ENSOJAG00000021654) zgc:171566 (ENSOJAG00000022369) GRIP2 (ENSOJAG00000022415) slc6a6b (ENSOJAG00000022599) LSM3 (ENSOJAG00000022940) ENSOJAG00000022946 RIMS4 (ENSOJAG00000022948) ENSOJAG00000022957 aldh1l1 (ENSOJAG00000022974) ENSOJAG00000023054 pdrg1 (ENSOJAG00000023058) ENSOJAG00000023064 Indian medaka MODERN SPECIES 8 ENSOMEG00000001533 fezf2 (ENSOMEG00000001553) ptprga (ENSOMEG00000001562) MTMR14 (ENSOMEG00000001585) ENSOMEG00000001605 si:dkey-19e4.5 (ENSOMEG00000001615) ENSOMEG00000001639 ENSOMEG00000001653 ENSOMEG00000001657 SERINC3 (ENSOMEG00000001667) nuf2 (ENSOMEG00000001674) si:ch211-15p9.2 (ENSOMEG00000001677) rbm39a (ENSOMEG00000001685) tsen2 (ENSOMEG00000001692) #19 MKRN2OS (ENSOMEG00000001696) #20 mkrn2 (ENSOMEG00000001704) #22 FAM107A (ENSOMEG00000001711) PTPRT (ENSOMEG00000001773) zgc:171566 (ENSOMEG00000001809) GRIP2 (ENSOMEG00000001874) ENSOMEG00000001898 slc6a6b (ENSOMEG00000001907) LSM3 (ENSOMEG00000001915) ENSOMEG00000001927 RIMS4 (ENSOMEG00000001933) ENSOMEG00000001945 aldh1l1 (ENSOMEG00000001957) pdrg1 (ENSOMEG00000001971) ENSOMEG00000001978 znf831 (ENSOMEG00000001982) cstf1 (ENSOMEG00000001993) Ovalentaria_B ANCESTRAL SPECIES 30 ENSGT00940000155052 ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00940000171658 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.a.a.a.a.a.a.a ENSGT01030000234648.a.a.c.a ENSGT01030000234583.a.a.c.b.a.a.b.a.b.a.b ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 Cichlidae ANCESTRAL SPECIES 39 ENSGT00940000155052 ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT01030000234648.a.a.c.a ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00390000018547 Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00940000155052 ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.d ENSGT01030000234648.a.a.c.a ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.c ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 50 ENSGT00940000155052 ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.d ENSGT01030000234648.a.a.c.a ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.c ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a Haplochromini ANCESTRAL SPECIES 55 ENSGT00940000155052 ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.d ENSGT01030000234648.a.a.c.a ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.c ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a Haplochromini_A ANCESTRAL SPECIES 61 ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00940000181725 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.d ENSGT01030000234648.a.a.c.a ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.c ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a Haplochromini_B ANCESTRAL SPECIES 74 ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00940000181725 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.d ENSGT01030000234648.a.a.c.a ENSGT00970000193381.a.a.a.a.a.a.a.b.a.b.c ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a Eastern happy MODERN SPECIES 17 ENSACLG00000014728 snrpb (ENSACLG00000014707) ENSACLG00000014682 zgc:109913 (ENSACLG00000014668) ube2c (ENSACLG00000014635) polr2j (ENSACLG00000014564) DNTTIP1 (ENSACLG00000014543) pcif1 (ENSACLG00000014471) ENSACLG00000014458 isy1 (ENSACLG00000014430) ENSACLG00000014402 si:ch211-15p9.2 (ENSACLG00000014394) rbm39a (ENSACLG00000014339) tsen2 (ENSACLG00000014303) #19 MKRN2OS (ENSACLG00000014293) #20 mkrn2 (ENSACLG00000014256) #22 FAM107A (ENSACLG00000014232) ENSACLG00000014216 ENSACLG00000014134 ASCL5 (ENSACLG00000014120) aldh4a1 (ENSACLG00000014062) ENSACLG00000014039 AMIGO3 (ENSACLG00000014028) RNF123 (ENSACLG00000013912) ENSACLG00000013900 ENSACLG00000013891 ENSACLG00000013886 GRM7 (ENSACLG00000013783) ENSACLG00000013707 nicn1 (ENSACLG00000013534) ENSACLG00000013525 Zebra mbuna MODERN SPECIES 476 ENSMZEG00005023977 MKRN2OS (ENSMZEG00005023976) #20 mkrn2 (ENSMZEG00005023975) #22 FAM107A (ENSMZEG00005023974) ENSMZEG00005023973 P. nyererei MODERN SPECIES 810 ENSPNYG00000011196 ENSPNYG00000011186 DNTTIP1 (ENSPNYG00000011127) ENSPNYG00000011089 rbm39a (ENSPNYG00000010982) ENSPNYG00000010948 MKRN2OS (ENSPNYG00000010925) #20 mkrn2 (ENSPNYG00000010905) #22 Burton s mouthbrooder MODERN SPECIES 859 KCNQ2 (ENSHBUG00000008259) ctsa (ENSHBUG00000008291) ENSHBUG00000008323 snrpb (ENSHBUG00000008369) ENSHBUG00000008401 zgc:109913 (ENSHBUG00000008459) ube2c (ENSHBUG00000008447) polr2j (ENSHBUG00000008467) DNTTIP1 (ENSHBUG00000008832) pcif1 (ENSHBUG00000008883) ENSHBUG00000008903 ENSHBUG00000008922 si:ch211-15p9.2 (ENSHBUG00000008942) rbm39a (ENSHBUG00000009017) tsen2 (ENSHBUG00000009039) #19 mkrn2 (ENSHBUG00000009078) #22 ENSHBUG00000009088 Lyretail cichlid MODERN SPECIES 374 ENSNBRG00000006497 ENSNBRG00000006517 zgc:109913 (ENSNBRG00000006543) ube2c (ENSNBRG00000006560) polr2j (ENSNBRG00000006580) ENSNBRG00000006661 pcif1 (ENSNBRG00000006865) pcif1 (ENSNBRG00000006900) ENSNBRG00000006938 isy1 (ENSNBRG00000006974) ENSNBRG00000006996 si:ch211-15p9.2 (ENSNBRG00000007016) rbm39a (ENSNBRG00000007057) tsen2 (ENSNBRG00000007105) #19 MKRN2OS (ENSNBRG00000007129) #20 mkrn2 (ENSNBRG00000007146) #22 ENSNBRG00000007180 PIK3C2B (ENSNBRG00000007196) ENSNBRG00000007273 ENSNBRG00000007286 aldh4a1 (ENSNBRG00000007308) ENSNBRG00000007338 AMIGO3 (ENSNBRG00000007350) ENSNBRG00000007363 ENSNBRG00000007377 ENSNBRG00000007381 ENSNBRG00000007394 dag1 (ENSNBRG00000007446) pcbp4 (ENSNBRG00000007475) rbm15b (ENSNBRG00000007512) manf (ENSNBRG00000007537) Nile tilapia MODERN SPECIES 17 zgc:109913 (ENSONIG00000000252) ube2c (ENSONIG00000028821) polr2j (ENSONIG00000000259) ENSONIG00000028562 pcif1 (ENSONIG00000000261) ENSONIG00000000263 ENSONIG00000042201 ENSONIG00000039382 ENSONIG00000032978 isy1 (ENSONIG00000000267) ENSONIG00000033174 si:ch211-15p9.2 (ENSONIG00000000272) rbm39a (ENSONIG00000000274) tsen2 (ENSONIG00000000278) #19 ENSONIG00000000280 mkrn2 (ENSONIG00000000281) #22 ENSONIG00000042490 ENSONIG00000041988 FAM107A (ENSONIG00000000289) ENSONIG00000029056 ASCL5 (ENSONIG00000039187) aldh4a1 (ENSONIG00000000298) RNF123 (ENSONIG00000000304) AMIGO3 (ENSONIG00000020715) ENSONIG00000043088 ENSONIG00000035000 GRM7 (ENSONIG00000000308) ENSONIG00000033125 ENSONIG00000028696 ENSONIG00000032897 nicn1 (ENSONIG00000018549) Midas cichlid MODERN SPECIES 681 rbm39a (ENSACIG00000022910) tsen2 (ENSACIG00000022861) #19 MKRN2OS (ENSACIG00000022850) #20 mkrn2 (ENSACIG00000022839) #22 FAM107A (ENSACIG00000022815) PIK3C2B (ENSACIG00000022606) cand2 (ENSACIG00000022514) sec13 (ENSACIG00000022500) dnase1l4.2 (ENSACIG00000022468) ENSACIG00000022447 grm8b (ENSACIG00000022439) Pomacentridae ANCESTRAL SPECIES 125 ENSGT00940000169138 ENSGT00940000155052 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a Pomacentridae_A ANCESTRAL SPECIES 131 ENSGT00880000138014.b ENSGT00940000155052 ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a Amphiprion ANCESTRAL SPECIES 219 ENSGT00880000138014.b ENSGT00940000155052 ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a Clown anemonefish MODERN SPECIES 1246 ctsa (ENSAOCG00000024524) ENSAOCG00000006868 snrpb (ENSAOCG00000006876) ENSAOCG00000006889 zgc:109913 (ENSAOCG00000000355) ube2c (ENSAOCG00000002648) polr2j (ENSAOCG00000006937) DNTTIP1 (ENSAOCG00000006955) pcif1 (ENSAOCG00000007011) ENSAOCG00000001904 isy1 (ENSAOCG00000007147) si:ch211-15p9.2 (ENSAOCG00000007205) rbm39a (ENSAOCG00000007223) tsen2 (ENSAOCG00000007248) #19 MKRN2OS (ENSAOCG00000007255) #20 mkrn2 (ENSAOCG00000007297) #22 FAM107A (ENSAOCG00000007309) Orange clownfish MODERN SPECIES 20 ctsa (ENSAPEG00000021535) snrpb (ENSAPEG00000021585) ENSAPEG00000021623 ENSAPEG00000021651 zgc:109913 (ENSAPEG00000021662) ube2c (ENSAPEG00000021682) polr2j (ENSAPEG00000021761) ENSAPEG00000021737 pcif1 (ENSAPEG00000021778) ENSAPEG00000021832 isy1 (ENSAPEG00000021883) si:ch211-15p9.2 (ENSAPEG00000021920) rbm39a (ENSAPEG00000021927) tsen2 (ENSAPEG00000021947) #19 MKRN2OS (ENSAPEG00000021959) #20 mkrn2 (ENSAPEG00000021987) #22 ENSAPEG00000022016 ENSAPEG00000022054 ENSAPEG00000022073 khk (ENSAPEG00000022116) pltp (ENSAPEG00000022254) ddx27 (ENSAPEG00000022281) ccdc71 (ENSAPEG00000022297) ENSAPEG00000022339 ENSAPEG00000022368 ENSAPEG00000022397 ENSAPEG00000022416 hgh1 (ENSAPEG00000022424) zgc:153675 (ENSAPEG00000022448) rbbp5 (ENSAPEG00000022468) DCAF1 (ENSAPEG00000022532) Spiny chromis MODERN SPECIES 2747 MKRN2OS (ENSAPOG00000014856) #20 mkrn2 (ENSAPOG00000014842) #22 FAM107A (ENSAPOG00000014651) Bicolor damselfish MODERN SPECIES 924 ENSSPAG00000021975 zgc:109913 (ENSSPAG00000021969) ube2c (ENSSPAG00000021961) polr2j (ENSSPAG00000021953) DNTTIP1 (ENSSPAG00000021948) pcif1 (ENSSPAG00000021921) ENSSPAG00000021911 isy1 (ENSSPAG00000021900) ENSSPAG00000021850 si:ch211-15p9.2 (ENSSPAG00000021816) rbm39a (ENSSPAG00000021798) ENSSPAG00000021789 ENSSPAG00000021777 ENSSPAG00000021756 #19 ENSSPAG00000021741 #20 mkrn2 (ENSSPAG00000021715) #22 FAM107A (ENSSPAG00000021701) wnt7aa (ENSSPAG00000021691) FBLN2 (ENSSPAG00000021662) hdac11 (ENSSPAG00000021638) Percomorphaceae_C ANCESTRAL SPECIES 1 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.a.a.a.a.a.a.a ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00940000154856.A.b.e.b ENSGT00390000010760.e.a ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 Percomorphaceae_D ANCESTRAL SPECIES 3 ENSGT00940000155052 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00940000154856.A.b.e.b ENSGT00390000010760.e.a ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a Anabantaria ANCESTRAL SPECIES ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT01030000235208 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00940000154856.A.b.e.b ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00390000018547 Anabantoidei ANCESTRAL SPECIES 1 ENSGT00940000160093.a ENSGT00880000138014.b ENSGT00940000169138 ENSGT00940000155052 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000154468.tb.a ENSGT00960000191447 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00940000154856.A.b.e.b ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a ENSGT00390000018547 Climbing perch DUPLICATION Climbing perch MODERN SPECIES 18 ENSATEG00000009807 ENSATEG00000009791 ube2c (ENSATEG00000009751) ENSATEG00000027254 ENSATEG00000028967 ENSATEG00000028604 ENSATEG00000009619 ENSATEG00000009541 ENSATEG00000009521 ENSATEG00000009504 ENSATEG00000009461 ENSATEG00000009443 ENSATEG00000026035 ENSATEG00000028083 #20 ENSATEG00000029135 #20 mkrn2 (ENSATEG00000009352) #22 ENSATEG00000009337 ENSATEG00000009229 ENSATEG00000009210 ENSATEG00000009200 ENSATEG00000009148 ENSATEG00000009115 ENSATEG00000008817 ENSATEG00000026741 ENSATEG00000008775 ENSATEG00000008739 ENSATEG00000008720 ENSATEG00000025280 ENSATEG00000008680 ENSATEG00000008577 pcbp4 (ENSATEG00000008529) Climbing perch MODERN SPECIES 34 ENSATEG00000007196 ENSATEG00000007187 ENSATEG00000028685 ENSATEG00000007074 #22 ENSATEG00000027891 ENSATEG00000025784 ENSATEG00000007013 Siamese fighting fish MODERN SPECIES 16 snrpb (ENSBSLG00000004016) ENSBSLG00000003989 ENSBSLG00000003983 zgc:109913 (ENSBSLG00000003962) ube2c (ENSBSLG00000003919) polr2j (ENSBSLG00000003900) DNTTIP1 (ENSBSLG00000003860) pcif1 (ENSBSLG00000003799) ENSBSLG00000003723 isy1 (ENSBSLG00000003665) ENSBSLG00000003633 rbm39a (ENSBSLG00000003071) ENSBSLG00000003068 ENSBSLG00000003061 ENSBSLG00000003059 mkrn2 (ENSBSLG00000003043) #22 ENSBSLG00000003042 FAM107A (ENSBSLG00000003040) PIK3C2B (ENSBSLG00000002809) ENSBSLG00000002751 ASCL5 (ENSBSLG00000002744) aldh4a1 (ENSBSLG00000002311) AMIGO3 (ENSBSLG00000002132) GRM7 (ENSBSLG00000001476) nicn1 (ENSBSLG00000001438) dag1 (ENSBSLG00000001431) pcbp4 (ENSBSLG00000001415) pcbp4 (ENSBSLG00000001408) rbm15b (ENSBSLG00000001399) manf (ENSBSLG00000001389) oser1 (ENSBSLG00000001381) Zig-zag eel MODERN SPECIES 19 ENSMAMG00000009294 ENSMAMG00000025668 ENSMAMG00000009308 zgc:109913 (ENSMAMG00000009336) ube2c (ENSMAMG00000009347) ENSMAMG00000009374 ENSMAMG00000009388 pcif1 (ENSMAMG00000009401) ENSMAMG00000009469 ENSMAMG00000009501 ENSMAMG00000009547 ENSMAMG00000009666 ENSMAMG00000009683 ENSMAMG00000009733 #19 ENSMAMG00000024966 ENSMAMG00000009756 #22 ENSMAMG00000027632 ENSMAMG00000009790 ENSMAMG00000009865 ENSMAMG00000009874 ENSMAMG00000028140 ENSMAMG00000027797 ENSMAMG00000009949 ENSMAMG00000010030 ENSMAMG00000010034 ENSMAMG00000010042 ENSMAMG00000010071 ENSMAMG00000010098 nicn1 (ENSMAMG00000028280) ENSMAMG00000010144 pcbp4 (ENSMAMG00000010163) Carangaria ANCESTRAL SPECIES 34 ENSGT00940000155052 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000178492 ENSGT00560000077335 ENSGT00940000154404.b ENSGT00940000163864 Carangaria_A ANCESTRAL SPECIES 81 ENSGT00940000155052 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 Seriola ANCESTRAL SPECIES 69 ENSGT00940000155052 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00390000003839.b #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00970000193381.a.b.b.c.b.b.a.a.a ENSGT00940000163190.g.a ENSGT00940000163190.h.a.b.ab ENSGT00940000163190.h.a.b.`b ENSGT00560000077335 ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT00970000193381.a.b.b.c.b.b.a.a.b ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00940000154856.A.b.e.b Yellowtail amberjack MODERN SPECIES 2784 snrpb (ENSSLDG00000022391) ENSSLDG00000022379 zgc:109913 (ENSSLDG00000022371) ube2c (ENSSLDG00000022361) polr2j (ENSSLDG00000022354) ENSSLDG00000022332 pcif1 (ENSSLDG00000022277) ENSSLDG00000022265 isy1 (ENSSLDG00000022252) ENSSLDG00000022237 si:ch211-15p9.2 (ENSSLDG00000022216) rbm39a (ENSSLDG00000022188) ENSSLDG00000022171 #19 ENSSLDG00000022152 #20 ENSSLDG00000022143 #20 mkrn2 (ENSSLDG00000022136) #22 FAM107A (ENSSLDG00000022117) ENSSLDG00000022106 PIK3C2B (ENSSLDG00000022056) ENSSLDG00000022032 ASCL5 (ENSSLDG00000022029) ENSSLDG00000022021 ENSSLDG00000022012 ENSSLDG00000022006 ENSSLDG00000021996 aldh4a1 (ENSSLDG00000021961) AMIGO3 (ENSSLDG00000021955) RNF123 (ENSSLDG00000021901) ENSSLDG00000021892 Greater amberjack MODERN SPECIES 25 snrpb (ENSSDUG00000018539) ENSSDUG00000018530 zgc:109913 (ENSSDUG00000018521) ube2c (ENSSDUG00000018505) polr2j (ENSSDUG00000018490) DNTTIP1 (ENSSDUG00000018467) pcif1 (ENSSDUG00000018400) ENSSDUG00000018317 isy1 (ENSSDUG00000018291) ENSSDUG00000018275 si:ch211-15p9.2 (ENSSDUG00000018226) rbm39a (ENSSDUG00000018191) tsen2 (ENSSDUG00000018175) #19 MKRN2OS (ENSSDUG00000018163) #20 ENSSDUG00000018155 #20 mkrn2 (ENSSDUG00000018142) #22 FAM107A (ENSSDUG00000018125) PIK3C2B (ENSSDUG00000018064) ENSSDUG00000018049 ASCL5 (ENSSDUG00000018046) ENSSDUG00000018040 ENSSDUG00000018032 ENSSDUG00000018027 ENSSDUG00000018013 ENSSDUG00000018009 ENSSDUG00000018007 ENSSDUG00000017993 ENSSDUG00000017981 aldh4a1 (ENSSDUG00000017947) AMIGO3 (ENSSDUG00000017937) RNF123 (ENSSDUG00000017867) Barramundi perch MODERN SPECIES 440 snrpb (ENSLCAG00010023468) ENSLCAG00010023456 zgc:109913 (ENSLCAG00010023453) ube2c (ENSLCAG00010023448) polr2j (ENSLCAG00010023436) ENSLCAG00010023427 pcif1 (ENSLCAG00010023409) ENSLCAG00010023383 isy1 (ENSLCAG00010023375) ENSLCAG00010023348 si:ch211-15p9.2 (ENSLCAG00010023339) rbm39a (ENSLCAG00010023335) tsen2 (ENSLCAG00010023322) #19 ENSLCAG00010023318 ENSLCAG00010023317 #20 mkrn2 (ENSLCAG00010023314) #22 ENSLCAG00010023309 ENSLCAG00010023306 ENSLCAG00010023304 PIK3C2B (ENSLCAG00010023268) ENSLCAG00010023255 ASCL5 (ENSLCAG00010023252) ENSLCAG00010023249 aldh4a1 (ENSLCAG00010023227) ENSLCAG00010023206 ENSLCAG00010023204 AMIGO3 (ENSLCAG00010023202) RNF123 (ENSLCAG00010022972) Pleuronectoidei ANCESTRAL SPECIES 31 ENSGT00940000155052 ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00560000077335 ENSGT00940000163190.h.a.b ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00940000154856.A.b.e.b ENSGT00390000010760.e.a ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a Tongue sole MODERN SPECIES 2 snrpb (ENSCSEG00000020328) ENSCSEG00000020335 ENSCSEG00000020339 ENSCSEG00000020342 ube2c (ENSCSEG00000020347) polr2j (ENSCSEG00000020352) DNTTIP1 (ENSCSEG00000020357) pcif1 (ENSCSEG00000020360) ENSCSEG00000020371 isy1 (ENSCSEG00000020382) ENSCSEG00000020388 si:ch211-15p9.2 (ENSCSEG00000020393) rbm39a (ENSCSEG00000020394) tsen2 (ENSCSEG00000020407) #19 MKRN2OS (ENSCSEG00000020411) #20 mkrn2 (ENSCSEG00000020415) #22 ENSCSEG00000020423 PIK3C2B (ENSCSEG00000020431) ENSCSEG00000020442 CHST15 (ENSCSEG00000020445) aldh4a1 (ENSCSEG00000020448) RNF123 (ENSCSEG00000020456) AMIGO3 (ENSCSEG00000020465) psmf1 (ENSCSEG00000020469) tma7 (ENSCSEG00000020472) slmapa (ENSCSEG00000020484) ENSCSEG00000020757 mcm2 (ENSCSEG00000020768) cyc1 (ENSCSEG00000020779) smpd4 (ENSCSEG00000020794) pigu (ENSCSEG00000000428) Turbot MODERN SPECIES 18 ENSSMAG00000023950 zgc:109913 (ENSSMAG00000006745) ube2c (ENSSMAG00000006707) ENSSMAG00000006729 ENSSMAG00000006679 pcif1 (ENSSMAG00000006634) ENSSMAG00000006615 ENSSMAG00000006601 ENSSMAG00000006593 ENSSMAG00000023429 ENSSMAG00000006527 ENSSMAG00000006499 ENSSMAG00000006440 ENSSMAG00000006406 #19 ENSSMAG00000006394 #20 ENSSMAG00000006350 #22 ENSSMAG00000033433 ENSSMAG00000006226 ENSSMAG00000006185 ENSSMAG00000006159 ENSSMAG00000024919 ENSSMAG00000023613 ENSSMAG00000006132 ENSSMAG00000005990 ENSSMAG00000005933 nicn1 (ENSSMAG00000005914) ENSSMAG00000022100 ENSSMAG00000025744 ENSSMAG00000027780 ENSSMAG00000034605 ENSSMAG00000005893 Eupercaria ANCESTRAL SPECIES ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00940000163190.h.a.b ENSGT00560000077335 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.a.a.a.a.a.a.a ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00940000154856.A.b.e.b ENSGT00390000010760.e.a ENSGT00390000008429.e.a ENSGT00940000159711.g Tetraodontidae ANCESTRAL SPECIES 179 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a Tetraodon MODERN SPECIES 26 ENSTNIG00000004922 ENSTNIG00000004915 ARFGEF2 (ENSTNIG00000004914) bcl2l1 (ENSTNIG00000004913) ENSTNIG00000004900 ENSTNIG00000004899 ENSTNIG00000004893 zgc:112001 (ENSTNIG00000004892) LRFN2 (ENSTNIG00000004891) atp1a2a (ENSTNIG00000004890) ENSTNIG00000004889 ENSTNIG00000004888 fli1rs (ENSTNIG00000004887) ENSTNIG00000004886 DOCK3 (ENSTNIG00000004884) mkrn2 (ENSTNIG00000004883) #22 FAM107A (ENSTNIG00000004882) ENSTNIG00000000772 ENSTNIG00000004881 smpd4 (ENSTNIG00000004880) DCAF1 (ENSTNIG00000004879) CTNNA2 (ENSTNIG00000004878) tmem167b (ENSTNIG00000004877) MAPK14 (ENSTNIG00000004876) ENSTNIG00000004875 ENSTNIG00000004873 ENSTNIG00000004871 ENSTNIG00000003241 ENSTNIG00000005340 ENSTNIG00000004860 smarca4a (ENSTNIG00000004859) Fugu MODERN SPECIES 10 zgc:109913 (ENSTRUG00000001475) ENSTRUG00000026594 polr2j (ENSTRUG00000032405) DNTTIP1 (ENSTRUG00000000728) ENSTRUG00000026947 ENSTRUG00000021720 ENSTRUG00000033298 ENSTRUG00000027760 ENSTRUG00000032566 MKRN2OS (ENSTRUG00000031839) #20 ENSTRUG00000004124 #19 ENSTRUG00000031743 rbm39a (ENSTRUG00000021378) ENSTRUG00000031224 #19 MKRN2OS (ENSTRUG00000029635) #20 mkrn2 (ENSTRUG00000003156) #22 ENSTRUG00000020229 ENSTRUG00000026378 ENSTRUG00000003638 ENSTRUG00000026113 ENSTRUG00000028895 ENSTRUG00000028985 ENSTRUG00000030913 ENSTRUG00000033445 matn4 (ENSTRUG00000000492) RBPJL (ENSTRUG00000030033) ENSTRUG00000033248 KCNS1 (ENSTRUG00000032761) ENSTRUG00000000941 cox6c (ENSTRUG00000001090) ENSTRUG00000021176 Eupecaria_A ANCESTRAL SPECIES ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00940000163190.h.a.b ENSGT00560000077335 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.a.a.a.a.a.a.a ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00940000154856.A.b.e.b ENSGT00390000010760.e.a ENSGT00390000008429.e.a ENSGT00940000159711.g Eupecaria_B ANCESTRAL SPECIES 2 ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00940000163190.h.a.b ENSGT00560000077335 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.a.a.a.a.a.a.a ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00940000154856.A.b.e.b ENSGT00390000010760.e.a ENSGT00390000008429.e.a ENSGT00940000159711.g Eupecaria_C ANCESTRAL SPECIES 41 ENSGT00940000155052 ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00940000163190.h.a.b ENSGT00560000077335 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.a.a.a.a.a.a.a ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 47 ENSGT00940000155052 ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000169528 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00940000163190.h.a.b ENSGT00560000077335 ENSGT00940000155781 ENSGT00950000183146.b.b ENSGT00970000193381.a.a.a.a.a.a.a ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 European seabass MODERN SPECIES 42 ENSDLAG00005029211 zgc:109913 (ENSDLAG00005026801) ube2c (ENSDLAG00005019745) ENSDLAG00005029053 pcif1 (ENSDLAG00005015241) ENSDLAG00005016873 ENSDLAG00005026960 ENSDLAG00005027529 ENSDLAG00005028434 ENSDLAG00005030993 ENSDLAG00005026833 ENSDLAG00005026968 #19 ENSDLAG00005028761 #20 ENSDLAG00005034482 ENSDLAG00005027455 ENSDLAG00005003526 #22 Large yellow croaker MODERN SPECIES 478 SDC4 (ENSLCRG00005004798) oser1 (ENSLCRG00005004797) ENSLCRG00005004796 rbm15b (ENSLCRG00005004794) manf (ENSLCRG00005004793) pcbp4 (ENSLCRG00005004788) dag1 (ENSLCRG00005004787) ENSLCRG00005004784 ENSLCRG00005004781 ENSLCRG00005004778 nicn1 (ENSLCRG00005004775) ENSLCRG00005004770 GRM7 (ENSLCRG00005004674) ENSLCRG00005004672 ENSLCRG00005004671 mkrn2 (ENSLCRG00005004669) #22 ENSLCRG00005004668 PIK3C2B (ENSLCRG00005004388) ENSLCRG00005004379 ASCL5 (ENSLCRG00005004377) AMIGO3 (ENSLCRG00005004375) RNF123 (ENSLCRG00005001426) si:ch211-15p9.2 (ENSLCRG00005001330) tsen2 (ENSLCRG00005001328) #19 ENSLCRG00005001327 isy1 (ENSLCRG00005001325) ENSLCRG00005001323 ENSLCRG00005001320 pcif1 (ENSLCRG00005001245) DNTTIP1 (ENSLCRG00005001231) polr2j (ENSLCRG00005001228) Gilthead seabream MODERN SPECIES 20 snrpb (ENSSAUG00010009296) ENSSAUG00010009300 ENSSAUG00010009302 ENSSAUG00010009305 zgc:109913 (ENSSAUG00010009306) ube2c (ENSSAUG00010009309) polr2j (ENSSAUG00010009313) DNTTIP1 (ENSSAUG00010009314) pcif1 (ENSSAUG00010009318) ENSSAUG00010009335 isy1 (ENSSAUG00010009336) si:ch211-15p9.2 (ENSSAUG00010009338) rbm39a (ENSSAUG00010009342) ENSSAUG00010009670 #19 ENSSAUG00010009672 mkrn2 (ENSSAUG00010009678) #22 FAM107A (ENSSAUG00010009681) PIK3C2B (ENSSAUG00010009714) ENSSAUG00010012206 ENSSAUG00010012207 aldh4a1 (ENSSAUG00010012211) RNF123 (ENSSAUG00010012258) AMIGO3 (ENSSAUG00010013828) ENSSAUG00010013829 ENSSAUG00010013830 ENSSAUG00010013831 ENSSAUG00010013832 nicn1 (ENSSAUG00010013835) dag1 (ENSSAUG00010013837) ENSSAUG00010013840 ENSSAUG00010013846 Perciformes ANCESTRAL SPECIES ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00940000163190.h.a.b ENSGT00950000183146.b.b ENSGT00940000155781 ENSGT01030000234648.a.a.c.a ENSGT00390000001505 ENSGT00940000154856.A.b.e.b ENSGT00390000010760.e.a ENSGT00390000008429.e.a ENSGT00940000159711.g ENSGT00940000160561 ENSGT00390000007160.a.a Cottioidei ANCESTRAL SPECIES ENSGT00940000169138 ENSGT00730000111020.b.b ENSGT00940000153725.a.a ENSGT00930000150941 ENSGT00550000074975 ENSGT00510000047836 ENSGT00390000016206 ENSGT00940000164112.b ENSGT00390000014109 ENSGT00950000183041.A.a.a ENSGT00940000156368.a ENSGT00940000154468.tb.a ENSGT00390000013266 #19 ENSGT00390000003839.a #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00940000163190.h.a.b ENSGT00940000155326.b ENSGT00940000160937 ENSGT00940000158986 ENSGT00940000153717.a.b ENSGT00390000014105 ENSGT00730000111323 ENSGT01050000244824.F ENSGT00390000014941 ENSGT00390000012257 ENSGT00950000183202.a.a Lumpfish MODERN SPECIES 20 ENSCLMG00005003835 ENSCLMG00005003838 zgc:109913 (ENSCLMG00005003839) ube2c (ENSCLMG00005003843) polr2j (ENSCLMG00005003876) DNTTIP1 (ENSCLMG00005003877) pcif1 (ENSCLMG00005003882) ENSCLMG00005003886 isy1 (ENSCLMG00005003889) ENSCLMG00005003891 si:ch211-15p9.2 (ENSCLMG00005003892) ENSCLMG00005003893 tsen2 (ENSCLMG00005004006) #19 ENSCLMG00005004007 #20 ENSCLMG00005004008 mkrn2 (ENSCLMG00005004009) #22 ENSCLMG00005004010 PIK3C2B (ENSCLMG00005003083) ENSCLMG00005007758 ASCL5 (ENSCLMG00005007759) ENSCLMG00005007760 aldh4a1 (ENSCLMG00005007771) PTPRT (ENSCLMG00005008937) ENSCLMG00005009208 rspo4 (ENSCLMG00005009209) CHD6 (ENSCLMG00005009283) ENSCLMG00005018887 ENSCLMG00005018889 blcap (ENSCLMG00005018891) mcm2 (ENSCLMG00005018892) pigu (ENSCLMG00005018982) Stickleback MODERN SPECIES 17 ENSGACG00000003210 ctsa (ENSGACG00000003218) snrpb (ENSGACG00000003262) ENSGACG00000003282 zgc:109913 (ENSGACG00000003284) ube2c (ENSGACG00000003290) polr2j (ENSGACG00000003310) DNTTIP1 (ENSGACG00000003311) pcif1 (ENSGACG00000003325) ENSGACG00000003330 isy1 (ENSGACG00000003342) si:ch211-15p9.2 (ENSGACG00000003371) rbm39a (ENSGACG00000003376) tsen2 (ENSGACG00000003387) #19 MKRN2OS (ENSGACG00000003394) #20 mkrn2 (ENSGACG00000003396) #22 ENSGACG00000003413 ENSGACG00000003417 ENSGACG00000003419 hoxb13a (ENSGACG00000003421) aldh4a1 (ENSGACG00000003426) ENSGACG00000003484 LSM3 (ENSGACG00000003488) slc6a6b (ENSGACG00000003490) GRIP2 (ENSGACG00000003495) RIMS4 (ENSGACG00000003513) YWHAB (ENSGACG00000003522) ENSGACG00000003551 ENSGACG00000003555 dnase1l4.1 (ENSGACG00000003559) ENSGACG00000003568 Perciformes_a ANCESTRAL SPECIES 89 ENSGT00390000014109 ENSGT00940000154468.tb.a ENSGT00390000003839.a #20 ENSGT00950000183077.a.b #22 ENSGT00390000011228.b.a.e.a ENSGT00940000158263 ENSGT00940000154404.b ENSGT00940000163864 ENSGT00560000077335 ENSGT00940000155781 ENSGT00950000183146.b.b Pike perch MODERN SPECIES 301 isy1 (ENSSLUG00000021098) rbm39a (ENSSLUG00000020924) MKRN2OS (ENSSLUG00000020903) #20 mkrn2 (ENSSLUG00000020895) #22 ENSSLUG00000020890 PIK3C2B (ENSSLUG00000019973) ENSSLUG00000019917 ASCL5 (ENSSLUG00000019913) ENSSLUG00000019910 ENSSLUG00000019907 ENSSLUG00000019903 aldh4a1 (ENSSLUG00000019076) RNF123 (ENSSLUG00000018767) AMIGO3 (ENSSLUG00000018731) Tiger tail seahorse MODERN SPECIES 295 snrpb (ENSHCOG00000014888) ENSHCOG00000014879 zgc:109913 (ENSHCOG00000014860) ube2c (ENSHCOG00000014848) DNTTIP1 (ENSHCOG00000014830) polr2j (ENSHCOG00000014827) pcif1 (ENSHCOG00000014823) HDHD5 (ENSHCOG00000014795) isy1 (ENSHCOG00000014775) ENSHCOG00000014737 si:ch211-15p9.2 (ENSHCOG00000014721) rbm39a (ENSHCOG00000014668) ENSHCOG00000014632 #19 ENSHCOG00000014625 #20 ENSHCOG00000014610 mkrn2 (ENSHCOG00000014604) #22 FAM107A (ENSHCOG00000014565) PIK3C2B (ENSHCOG00000000710) ENSHCOG00000014417 aldh4a1 (ENSHCOG00000014399) RNF123 (ENSHCOG00000014368) AMIGO3 (ENSHCOG00000014318) ENSHCOG00000014312 dag1 (ENSHCOG00000014265) rbm15b (ENSHCOG00000014262) manf (ENSHCOG00000014258) ENSHCOG00000014246 sdc4 (ENSHCOG00000014227) uqcc1 (ENSHCOG00000014217) ENSHCOG00000014129 eif6 (ENSHCOG00000014120) Pinecone sodierfish MODERN SPECIES 19 trib3 (ENSMMDG00005010013) pnp4a (ENSMMDG00005010023) REM1 (ENSMMDG00005010198) st3gal8 (ENSMMDG00005010238) ENSMMDG00005010247 HTD2 (ENSMMDG00005010249) ENSMMDG00005010251 cpne1 (ENSMMDG00005010269) rbm12 (ENSMMDG00005011245) nfs1 (ENSMMDG00005011282) si:ch211-15p9.2 (ENSMMDG00005013091) rbm39a (ENSMMDG00005013094) ENSMMDG00005013237 ENSMMDG00005013239 ENSMMDG00005013242 #20 mkrn2 (ENSMMDG00005013246) #22 ENSMMDG00005013255 isy1 (ENSMMDG00005013257) ENSMMDG00005013263 pcif1 (ENSMMDG00005013278) ENSMMDG00005013309 polr2j (ENSMMDG00005013312) ube2c (ENSMMDG00005013313) zgc:109913 (ENSMMDG00005013317) ENSMMDG00005013318 snrpb (ENSMMDG00005013323) ENSMMDG00005013325 ddx27 (ENSMMDG00005013342) pltp (ENSMMDG00005013687) ctsa (ENSMMDG00005013692) KCNQ2 (ENSMMDG00005014475) Cod MODERN SPECIES 4 pcif1 (ENSGMOG00000018230) ENSGMOG00000018215 ENSGMOG00000023449 ube2c (ENSGMOG00000018194) zgc:109913 (ENSGMOG00000018184) ENSGMOG00000027984 ENSGMOG00000018161 ENSGMOG00000029077 ENSGMOG00000016662 ENSGMOG00000030222 ENSGMOG00000032377 tsen2 (ENSGMOG00000024153) #19 ENSGMOG00000022525 #20 ENSGMOG00000023593 ENSGMOG00000035527 #20 mkrn2 (ENSGMOG00000018490) #22 ENSGMOG00000007798 isy1 (ENSGMOG00000005635) ENSGMOG00000009106 ENSGMOG00000029915 RBM39 (ENSGMOG00000017567) ENSGMOG00000009599 CPNE1 (ENSGMOG00000011530) GLUT1 (ENSGMOG00000011678) ENSGMOG00000022253 ENSGMOG00000025779 ENSGMOG00000010859 ENSGMOG00000000101 SPDEF (ENSGMOG00000000105) pacsin1b (ENSGMOG00000000108) nudt3b (ENSGMOG00000031793) Spotted gar MODERN SPECIES 671 nol8 (ENSLOCG00000013864) ENSLOCG00000013869 iars1 (ENSLOCG00000013871) atp2b2 (ENSLOCG00000013890) SLC6A11 (ENSLOCG00000013904) slc6a1a (ENSLOCG00000013915) HRH1 (ENSLOCG00000013921) ATG7 (ENSLOCG00000013924) vgll4b (ENSLOCG00000013927) tamm41 (ENSLOCG00000013931) syn2a (ENSLOCG00000013941) timp4.2 (ENSLOCG00000013951) PPARG (ENSLOCG00000013954) #18 tsen2 (ENSLOCG00000013958) #19 MKRN2OS (ENSLOCG00000013968) #20 mkrn2 (ENSLOCG00000013970) #22 raf1b (ENSLOCG00000013974) #23 cnbpb (ENSLOCG00000013985) isy1 (ENSLOCG00000013988) zgc:77375 (ENSLOCG00000013994) rab43 (ENSLOCG00000014001) nuf2 (ENSLOCG00000014004) nuf2 (ENSLOCG00000014009) ENSLOCG00000018261 GP9 (ENSLOCG00000018262) ENSLOCG00000014014 ENSLOCG00000014017 acad9 (ENSLOCG00000014020) IQSEC1 (ENSLOCG00000014026) NUP210 (ENSLOCG00000014031) hdac11 (ENSLOCG00000014033) Reedfish MODERN SPECIES 9 nol8 (ENSECRG00000018962) iars1 (ENSECRG00000019013) ENSECRG00000019049 ENSECRG00000019113 SLC6A11 (ENSECRG00000019456) slc6a1a (ENSECRG00000019515) HRH1 (ENSECRG00000019568) ATG7 (ENSECRG00000019598) vgll4b (ENSECRG00000019720) tamm41 (ENSECRG00000020546) syn2a (ENSECRG00000020574) timp4.2 (ENSECRG00000020586) PPARG (ENSECRG00000020604) #18 TSEN2 (ENSECRG00000020616) #19 MKRN2OS (ENSECRG00000020632) #20 mkrn2 (ENSECRG00000020646) #22 raf1b (ENSECRG00000020686) #23 cnbpb (ENSECRG00000020753) isy1 (ENSECRG00000020784) zgc:77375 (ENSECRG00000020811) rab43 (ENSECRG00000020826) nuf2 (ENSECRG00000020838) ENSECRG00000020870 GP9 (ENSECRG00000020886) EFCC1 (ENSECRG00000020895) ENSECRG00000020909 acad9 (ENSECRG00000020941) IQSEC1 (ENSECRG00000020985) NUP210 (ENSECRG00000021042) NUP210 (ENSECRG00000021120) hdac11 (ENSECRG00000021200) Elephant shark MODERN SPECIES 1592 syn2a (ENSCMIG00000010866) TIMP4 (ENSCMIG00000010881) PPARG (ENSCMIG00000010883) #18 tsen2 (ENSCMIG00000010886) #19 mkrn2os (ENSCMIG00000010887) #20 mkrn2 (ENSCMIG00000010891) #22 raf1b (ENSCMIG00000010901) #23 cnbpb (ENSCMIG00000010936) isy1 (ENSCMIG00000010938) zgc:77375 (ENSCMIG00000010950) rab43 (ENSCMIG00000010951) ENSCMIG00000010954 ENSCMIG00000010960 EFCC1 (ENSCMIG00000010962) ENSCMIG00000010964 acad9 (ENSCMIG00000010969) IQSEC1 (ENSCMIG00000010972) NUP210 (ENSCMIG00000011053) hdac11 (ENSCMIG00000011388) FBLN2 (ENSCMIG00000011392) wnt7aa (ENSCMIG00000011404) Cyclostomata ANCESTRAL SPECIES ENSGT00950000183077.a.b #22 Hagfish MODERN SPECIES 513 ENSEBUG00000013385 wls (ENSEBUG00000009888) ENSEBUG00000004452 kcnv2b (ENSEBUG00000006677) osbpl9 (ENSEBUG00000010125) ENSEBUG00000001165 ENSEBUG00000001991 ENSEBUG00000007732 ENSEBUG00000016490 ENSEBUG00000009219 ENSEBUG00000016051 ENSEBUG00000008087 ENSEBUG00000010533 ENSEBUG00000001288 ENSEBUG00000012213 mkrn2 (ENSEBUG00000004539) #22 ENSEBUG00000010960 ENSEBUG00000011208 ENSEBUG00000002509 ENSEBUG00000016624 ENSEBUG00000010621 ENSEBUG00000004390 ENSEBUG00000012616 ENSEBUG00000014465 ENSEBUG00000014881 ENSEBUG00000001451 ENSEBUG00000015427 ENSEBUG00000011649 GJD3 (ENSEBUG00000007303) ENSEBUG00000008213 Lamprey MODERN SPECIES 1839 ENSPMAG00000001072 #22 ENSPMAG00000001073 hsp90b1 (ENSPMAG00000001077) uqcc6 (ENSPMAG00000001120) UQCC5 (ENSPMAG00000001121) Vertebrata ANCESTRAL SPECIES ENSGT00950000183077.a.a ##22 Gnathostomata ANCESTRAL SPECIES ENSGT00950000183077.a.a ##22 Euteleostomi ANCESTRAL SPECIES 1176 ENSGT00390000007427 ENSGT00950000183077.a.a ##22 Sarcopterygii ANCESTRAL SPECIES 545 ENSGT00390000018051 ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 Tetrapoda ANCESTRAL SPECIES 87 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00940000177916 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000165307.c Amniota ANCESTRAL SPECIES 58 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00940000177916 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B Mammalia ANCESTRAL SPECIES 36 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B Theria DUPLICATION Theria DUPLICATION Theria ANCESTRAL SPECIES ENSGT01050000244883.A.a.a.a.b ENSGT01020000230389.b.a.a.a.a ENSGT00530000063085.A.a ENSGT00940000161540 ENSGT00910000144330 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Eutheria DUPLICATION Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES 1 ENSGT00910000144330 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Boreoeutheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.a ##22 Euarchontoglires ANCESTRAL SPECIES 13 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Primates ANCESTRAL SPECIES 12 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Haplorrhini ANCESTRAL SPECIES 8 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Simiiformes ANCESTRAL SPECIES 12 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000146873 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Catarrhini ANCESTRAL SPECIES 6 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000146873 ENSGT00940000154961.c.a ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154.a ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00390000003316.d.w.b ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Hominoidea ANCESTRAL SPECIES 6 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000146873 ENSGT00940000154961.c.a ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154.a ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00390000003316.d.w.b ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00950000182965.b.fb ENSGT00390000000159 ENSGT00940000162001 Hominidae ANCESTRAL SPECIES 11 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000146873 ENSGT00940000154961.c.a ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154.a ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00390000003316.d.w.b ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00950000182965.b.fb ENSGT00390000000159 ENSGT00940000162001 Homo/Pan/Gorilla group ANCESTRAL SPECIES 15 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000146873 ENSGT00940000154961.c.a ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154.a ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00390000003316.d.w.b ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00950000182965.b.fb ENSGT00390000000159 ENSGT00940000162001 Homo/Pan group ANCESTRAL SPECIES 15 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000146873 ENSGT00940000154961.c.a ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154.a ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00390000003316.d.w.b ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00950000182965.b.fb ENSGT00390000000159 ENSGT00940000162001 Pan ANCESTRAL SPECIES 13 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000146873 ENSGT00940000154961.c.a ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154.a ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00390000003316.d.w.b ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00940000155858 ENSGT00950000182965.b.fb ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 20 PRSS37 (ENSPTRG00000019781) TAS2R5 (ENSPTRG00000019780) TAS2R4 (ENSPTRG00000040235) TAS2R3 (ENSPTRG00000019779) SSBP1 (ENSPTRG00000019778) WEE2 (ENSPTRG00000028383) ENSPTRG00000049781 DENND11 (ENSPTRG00000019776) AGK (ENSPTRG00000019775) TMEM178B (ENSPTRG00000047632) MRPS33 (ENSPTRG00000019773) BRAF (ENSPTRG00000019769) NDUFB2 (ENSPTRG00000019771) ADCK2 (ENSPTRG00000019770) DENND2A (ENSPTRG00000019768) MKRN1 (ENSPTRG00000019766) ##22 RAB19 (ENSPTRG00000019765) SLC37A3 (ENSPTRG00000019764) KDM7A (ENSPTRG00000019762) PARP12 (ENSPTRG00000019761) TBXAS1 (ENSPTRG00000019760) HIPK2 (ENSPTRG00000019758) ENSPTRG00000043998 CLEC2L (ENSPTRG00000039273) KLRG2 (ENSPTRG00000019756) LUC7L2 (ENSPTRG00000019755) UBN2 (ENSPTRG00000019753) ENSPTRG00000052203 TTC26 (ENSPTRG00000019752) ZC3HAV1 (ENSPTRG00000019750) ZC3HAV1L (ENSPTRG00000019749) Chimpanzee MODERN SPECIES 579 OR9A1P (ENSPTRG00000043919) ENSPTRG00000045859 ENSPTRG00000043567 ENSPTRG00000047526 ENSPTRG00000050321 ENSPTRG00000052697 ENSPTRG00000044303 ENSPTRG00000044959 ENSPTRG00000050750 ENSPTRG00000045391 ENSPTRG00000051927 ENSPTRG00000051563 ENSPTRG00000047330 ENSPTRG00000047707 ENSPTRG00000051830 ENSPTRG00000042822 ##22 ENSPTRG00000050561 Bonobo MODERN SPECIES 20 PRSS37 (ENSPPAG00000033068) TAS2R5 (ENSPPAG00000009772) TAS2R4 (ENSPPAG00000007093) TAS2R3 (ENSPPAG00000006982) SSBP1 (ENSPPAG00000035223) WEE2 (ENSPPAG00000021161) ENSPPAG00000043213 ENSPPAG00000029884 AGK (ENSPPAG00000041636) TMEM178B (ENSPPAG00000002445) MRPS33 (ENSPPAG00000043201) BRAF (ENSPPAG00000036004) NDUFB2 (ENSPPAG00000039747) ADCK2 (ENSPPAG00000034476) DENND2A (ENSPPAG00000026508) MKRN1 (ENSPPAG00000040448) ##22 RAB19 (ENSPPAG00000032853) SLC37A3 (ENSPPAG00000033097) KDM7A (ENSPPAG00000036374) PARP12 (ENSPPAG00000029869) TBXAS1 (ENSPPAG00000028281) ENSPPAG00000043240 ENSPPAG00000036557 CLEC2L (ENSPPAG00000032828) KLRG2 (ENSPPAG00000043167) LUC7L2 (ENSPPAG00000037561) UBN2 (ENSPPAG00000028229) ENSPPAG00000042075 TTC26 (ENSPPAG00000034535) ZC3HAV1 (ENSPPAG00000039112) ZC3HAV1L (ENSPPAG00000028178) Human MODERN SPECIES 19 OR9A1P (ENSG00000237621) PRSS37 (ENSG00000165076) TAS2R5 (ENSG00000127366) TAS2R4 (ENSG00000127364) TAS2R3 (ENSG00000127362) SSBP1 (ENSG00000106028) WEE2 (ENSG00000214102) DENND11 (ENSG00000257093) AGK (ENSG00000006530) TMEM178B (ENSG00000261115) MRPS33 (ENSG00000090263) BRAF (ENSG00000157764) NDUFB2 (ENSG00000090266) ADCK2 (ENSG00000133597) DENND2A (ENSG00000146966) MKRN1 (ENSG00000133606) ##22 RAB19 (ENSG00000146955) SLC37A3 (ENSG00000157800) KDM7A (ENSG00000006459) PARP12 (ENSG00000059378) TBXAS1 (ENSG00000059377) HIPK2 (ENSG00000064393) CLEC2L (ENSG00000236279) KLRG2 (ENSG00000188883) FMC1-LUC7L2 (ENSG00000269955) LUC7L2 (ENSG00000146963) FMC1 (ENSG00000164898) UBN2 (ENSG00000157741) TTC26 (ENSG00000105948) ZC3HAV1 (ENSG00000105939) ZC3HAV1L (ENSG00000146858) Orangutan MODERN SPECIES 20 CLEC5A (ENSPPYG00000018072) PRSS37 (ENSPPYG00000018071) TAS2R5 (ENSPPYG00000018267) TAS2R4 (ENSPPYG00000035803) TAS2R3 (ENSPPYG00000018069) SSBP1 (ENSPPYG00000018068) WEE2 (ENSPPYG00000018066) DENND11 (ENSPPYG00000033394) AGK (ENSPPYG00000018064) TMEM178B (ENSPPYG00000029744) MRPS33 (ENSPPYG00000036255) BRAF (ENSPPYG00000018061) NDUFB2 (ENSPPYG00000018060) ADCK2 (ENSPPYG00000018059) DENND2A (ENSPPYG00000018058) MKRN1 (ENSPPYG00000018057) ##22 RAB19 (ENSPPYG00000018056) SLC37A3 (ENSPPYG00000018055) KDM7A (ENSPPYG00000018054) PARP12 (ENSPPYG00000018053) TBXAS1 (ENSPPYG00000018052) HIPK2 (ENSPPYG00000018051) CLEC2L (ENSPPYG00000029543) KLRG2 (ENSPPYG00000018049) LUC7L2 (ENSPPYG00000018048) FMC1 (ENSPPYG00000036314) UBN2 (ENSPPYG00000018046) TTC26 (ENSPPYG00000018045) ZC3HAV1 (ENSPPYG00000018044) ZC3HAV1L (ENSPPYG00000018043) KIAA1549 (ENSPPYG00000018042) Gibbon MODERN SPECIES 3 CLEC5A (ENSNLEG00000002394) OR9A4 (ENSNLEG00000002393) PRSS37 (ENSNLEG00000002371) TAS2R3 (ENSNLEG00000018419) SSBP1 (ENSNLEG00000002361) WEE2 (ENSNLEG00000002356) DENND11 (ENSNLEG00000030404) ENSNLEG00000027915 AGK (ENSNLEG00000002291) TMEM178B (ENSNLEG00000029749) MRPS33 (ENSNLEG00000002278) BRAF (ENSNLEG00000002139) NDUFB2 (ENSNLEG00000035760) ADCK2 (ENSNLEG00000002068) DENND2A (ENSNLEG00000002026) MKRN1 (ENSNLEG00000001921) ##22 RAB19 (ENSNLEG00000030911) SLC37A3 (ENSNLEG00000001879) KDM7A (ENSNLEG00000001833) PARP12 (ENSNLEG00000001802) TBXAS1 (ENSNLEG00000001637) HIPK2 (ENSNLEG00000031145) ENSNLEG00000028215 CLEC2L (ENSNLEG00000014203) KLRG2 (ENSNLEG00000014199) LUC7L2 (ENSNLEG00000014156) UBN2 (ENSNLEG00000014103) ENSNLEG00000030631 TTC26 (ENSNLEG00000014013) ZC3HAV1 (ENSNLEG00000014005) ZC3HAV1L (ENSNLEG00000031167) Cercopithecidae ANCESTRAL SPECIES 11 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000146873 ENSGT00940000154961.c.a ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154.a ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00390000003316.d.w.b ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Cercopithecinae ANCESTRAL SPECIES 8 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000146873 ENSGT00940000154961.c.a ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154.a ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00390000003316.d.w.b ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Cercopithecinae_a ANCESTRAL SPECIES 8 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000147594 ENSGT00910000146873 ENSGT00940000154961.c.a ENSGT00390000015299.a.b.b.a ENSGT00390000011401.k.a ENSGT00940000156154.a ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00390000003316.d.w.b ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Macaca ANCESTRAL SPECIES 3 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000147594 ENSGT00910000146873 ENSGT00940000154961.c.a ENSGT00390000015299.a.b.b.a ENSGT00390000011401.k.a ENSGT00940000156154.a ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00390000003316.d.w.b ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Macaca_a ANCESTRAL SPECIES 7 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961.c.a ENSGT00390000015299.a.b.b.a ENSGT00390000011401.k.a ENSGT00390000011401.k.b ENSGT00940000156154.a ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Crab-eating macaque MODERN SPECIES 13 TAS2R5 (ENSMFAG00000057048) TAS2R4 (ENSMFAG00000061404) TAS2R3 (ENSMFAG00000063716) SSBP1 (ENSMFAG00000032819) WEE2 (ENSMFAG00000038833) DENND11 (ENSMFAG00000002632) AGK (ENSMFAG00000039906) TMEM178B (ENSMFAG00000043984) MRPS33 (ENSMFAG00000032116) ENSMFAG00000057380 BRAF (ENSMFAG00000001069) NDUFB2 (ENSMFAG00000048116) ADCK2 (ENSMFAG00000007386) ENSMFAG00000048196 DENND2A (ENSMFAG00000043828) MKRN1 (ENSMFAG00000000737) ##22 RAB19 (ENSMFAG00000003529) SLC37A3 (ENSMFAG00000038757) ENSMFAG00000055772 KDM7A (ENSMFAG00000002056) PARP12 (ENSMFAG00000034646) TBXAS1 (ENSMFAG00000016846) HIPK2 (ENSMFAG00000001456) CLEC2L (ENSMFAG00000064966) LUC7L2 (ENSMFAG00000041131) FMC1 (ENSMFAG00000062411) UBN2 (ENSMFAG00000037061) ENSMFAG00000008156 TTC26 (ENSMFAG00000044086) ZC3HAV1 (ENSMFAG00000001484) KIAA1549 (ENSMFAG00000046305) Rhesus MODERN SPECIES 13 OR9A4 (ENSMMUG00000042443) PRSS37 (ENSMMUG00000053855) TAS2R5 (ENSMMUG00000056110) TAS2R4 (ENSMMUG00000022439) TAS2R3 (ENSMMUG00000059165) SSBP1 (ENSMMUG00000022442) WEE2 (ENSMMUG00000044167) DENND11 (ENSMMUG00000039865) AGK (ENSMMUG00000021017) TMEM178B (ENSMMUG00000041051) MRPS33 (ENSMMUG00000050535) BRAF (ENSMMUG00000042793) NDUFB2 (ENSMMUG00000015284) ADCK2 (ENSMMUG00000015282) DENND2A (ENSMMUG00000042299) MKRN1 (ENSMMUG00000010420) ##22 RAB19 (ENSMMUG00000010419) SLC37A3 (ENSMMUG00000015870) ENSMMUG00000053674 KDM7A (ENSMMUG00000008126) PARP12 (ENSMMUG00000004224) TBXAS1 (ENSMMUG00000004222) HIPK2 (ENSMMUG00000002481) CLEC2L (ENSMMUG00000037714) ENSMMUG00000055175 KLRG2 (ENSMMUG00000030100) LUC7L2 (ENSMMUG00000006770) UBN2 (ENSMMUG00000002277) TTC26 (ENSMMUG00000013645) ZC3HAV1 (ENSMMUG00000006550) ZC3HAV1L (ENSMMUG00000006549) Pig-tailed macaque MODERN SPECIES 479 TAS2R38 (ENSMNEG00000003977) CLEC5A (ENSMNEG00000039445) PRSS37 (ENSMNEG00000045224) SSBP1 (ENSMNEG00000034892) WEE2 (ENSMNEG00000032770) DENND11 (ENSMNEG00000034919) ENSMNEG00000001410 ENSMNEG00000003382 AGK (ENSMNEG00000029923) TMEM178B (ENSMNEG00000028782) MRPS33 (ENSMNEG00000044224) BRAF (ENSMNEG00000024672) NDUFB2 (ENSMNEG00000044806) ADCK2 (ENSMNEG00000031935) DENND2A (ENSMNEG00000036269) MKRN1 (ENSMNEG00000040268) ##22 RAB19 (ENSMNEG00000043765) SLC37A3 (ENSMNEG00000044880) KDM7A (ENSMNEG00000028468) PARP12 (ENSMNEG00000028999) TBXAS1 (ENSMNEG00000027928) HIPK2 (ENSMNEG00000039195) CLEC2L (ENSMNEG00000044275) ENSMNEG00000045317 KLRG2 (ENSMNEG00000031887) LUC7L2 (ENSMNEG00000042011) FMC1 (ENSMNEG00000041725) UBN2 (ENSMNEG00000037231) TTC26 (ENSMNEG00000036716) ZC3HAV1 (ENSMNEG00000036256) ZC3HAV1L (ENSMNEG00000038394) Cercopithecinae_b ANCESTRAL SPECIES 11 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000147594 ENSGT00910000146873 ENSGT00940000154961.c.a ENSGT00390000015299.a.b.b.a ENSGT00390000011401.k.a ENSGT00390000011401.k.b ENSGT00940000156154.a ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00390000003316.d.w.b ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Olive baboon MODERN SPECIES 14 PRSS37 (ENSPANG00000016705) TAS2R5 (ENSPANG00000047103) TAS2R4 (ENSPANG00000037718) TAS2R3 (ENSPANG00000037537) SSBP1 (ENSPANG00000009820) WEE2 (ENSPANG00000008933) DENND11 (ENSPANG00000001223) AGK (ENSPANG00000001222) ENSPANG00000051109 TMEM178B (ENSPANG00000029596) MRPS33 (ENSPANG00000048937) BRAF (ENSPANG00000004965) NDUFB2 (ENSPANG00000022006) ADCK2 (ENSPANG00000007837) DENND2A (ENSPANG00000018260) MKRN1 (ENSPANG00000017280) ##22 RAB19 (ENSPANG00000032483) SLC37A3 (ENSPANG00000007700) KDM7A (ENSPANG00000011491) PARP12 (ENSPANG00000022225) TBXAS1 (ENSPANG00000015017) HIPK2 (ENSPANG00000017281) CLEC2L (ENSPANG00000004966) KLRG2 (ENSPANG00000025362) LUC7L2 (ENSPANG00000007244) FMC1 (ENSPANG00000037789) UBN2 (ENSPANG00000016309) TTC26 (ENSPANG00000007701) ZC3HAV1 (ENSPANG00000023963) ZC3HAV1L (ENSPANG00000017282) KIAA1549 (ENSPANG00000018832) Cercopithecinae_d ANCESTRAL SPECIES 25 ENSGT00910000144330 ENSGT00940000164718 ENSGT00940000161483 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000147594 ENSGT00910000146873 ENSGT00940000154961.c.a ENSGT00390000015299.a.b.b.a ENSGT00390000011401.k.a ENSGT00940000156154.a ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00390000003316.d.w.b ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Sooty mangabey MODERN SPECIES 148 TAS2R38 (ENSCATG00000018198) CLEC5A (ENSCATG00000040577) OR9A1P (ENSCATG00000018573) PRSS37 (ENSCATG00000040618) SSBP1 (ENSCATG00000035429) WEE2 (ENSCATG00000007238) DENND11 (ENSCATG00000036082) ENSCATG00000000122 AGK (ENSCATG00000043619) TMEM178B (ENSCATG00000044426) MRPS33 (ENSCATG00000026661) BRAF (ENSCATG00000034341) NDUFB2 (ENSCATG00000022754) ADCK2 (ENSCATG00000029766) DENND2A (ENSCATG00000035508) MKRN1 (ENSCATG00000039778) ##22 RAB19 (ENSCATG00000029739) SLC37A3 (ENSCATG00000039038) KDM7A (ENSCATG00000031213) PARP12 (ENSCATG00000029372) TBXAS1 (ENSCATG00000009856) HIPK2 (ENSCATG00000036105) ENSCATG00000043660 CLEC2L (ENSCATG00000042754) KLRG2 (ENSCATG00000016932) LUC7L2 (ENSCATG00000042251) UBN2 (ENSCATG00000034194) TTC26 (ENSCATG00000034118) ZC3HAV1 (ENSCATG00000040380) ZC3HAV1L (ENSCATG00000034808) KIAA1549 (ENSCATG00000029277) Drill MODERN SPECIES 1178 TAS2R38 (ENSMLEG00000011241) CLEC5A (ENSMLEG00000014115) PRSS37 (ENSMLEG00000039528) SSBP1 (ENSMLEG00000039541) WEE2 (ENSMLEG00000023635) DENND11 (ENSMLEG00000035429) ENSMLEG00000029548 ENSMLEG00000011841 AGK (ENSMLEG00000043143) TMEM178B (ENSMLEG00000030888) ENSMLEG00000043989 BRAF (ENSMLEG00000041508) NDUFB2 (ENSMLEG00000034682) ADCK2 (ENSMLEG00000038169) DENND2A (ENSMLEG00000040269) MKRN1 (ENSMLEG00000033107) ##22 RAB19 (ENSMLEG00000032277) SLC37A3 (ENSMLEG00000034527) KDM7A (ENSMLEG00000039850) PARP12 (ENSMLEG00000036058) TBXAS1 (ENSMLEG00000043785) HIPK2 (ENSMLEG00000043975) CLEC2L (ENSMLEG00000038931) LUC7L2 (ENSMLEG00000027029) UBN2 (ENSMLEG00000035621) TTC26 (ENSMLEG00000029138) ZC3HAV1 (ENSMLEG00000042609) ZC3HAV1L (ENSMLEG00000037541) KIAA1549 (ENSMLEG00000031042) TMEM213 (ENSMLEG00000029406) ENSMLEG00000002502 Vervet Monkey MODERN SPECIES 13 PRSS37 (ENSCSAG00000008093) TAS2R5 (ENSCSAG00000019152) TAS2R4 (ENSCSAG00000019151) TAS2R3 (ENSCSAG00000019150) SSBP1 (ENSCSAG00000008102) WEE2 (ENSCSAG00000008117) DENND11 (ENSCSAG00000008128) AGK (ENSCSAG00000008178) ENSCSAG00000008203 ENSCSAG00000008209 MRPS33 (ENSCSAG00000008211) BRAF (ENSCSAG00000008218) NDUFB2 (ENSCSAG00000008224) ADCK2 (ENSCSAG00000008230) DENND2A (ENSCSAG00000008235) MKRN1 (ENSCSAG00000008246) ##22 RAB19 (ENSCSAG00000008251) SLC37A3 (ENSCSAG00000008259) ENSCSAG00000019149 KDM7A (ENSCSAG00000008271) PARP12 (ENSCSAG00000008282) TBXAS1 (ENSCSAG00000008338) HIPK2 (ENSCSAG00000008376) CLEC2L (ENSCSAG00000008387) KLRG2 (ENSCSAG00000008399) LUC7L2 (ENSCSAG00000008410) FMC1 (ENSCSAG00000008418) UBN2 (ENSCSAG00000008431) ENSCSAG00000019148 TTC26 (ENSCSAG00000008494) ZC3HAV1 (ENSCSAG00000008605) Rhinopithecus ANCESTRAL SPECIES 141 ENSGT00910000144330 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000146873 ENSGT00940000154961.c.a.c ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154.a ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 Black snub-nosed monkey MODERN SPECIES 1030 OR9A4 (ENSRBIG00000031832) PRSS37 (ENSRBIG00000038319) TAS2R5 (ENSRBIG00000006452) SSBP1 (ENSRBIG00000028396) WEE2 (ENSRBIG00000031199) DENND11 (ENSRBIG00000000540) ENSRBIG00000000681 AGK (ENSRBIG00000032192) TMEM178B (ENSRBIG00000021689) MRPS33 (ENSRBIG00000009406) ENSRBIG00000029491 BRAF (ENSRBIG00000034807) NDUFB2 (ENSRBIG00000019926) ADCK2 (ENSRBIG00000034656) DENND2A (ENSRBIG00000033715) MKRN1 (ENSRBIG00000027680) ##22 Golden snub-nosed monkey MODERN SPECIES 843 OR9A4 (ENSRROG00000010627) PRSS37 (ENSRROG00000039139) TAS2R5 (ENSRROG00000019559) SSBP1 (ENSRROG00000029359) WEE2 (ENSRROG00000013594) DENND11 (ENSRROG00000031612) ENSRROG00000021882 ENSRROG00000033402 TMEM178B (ENSRROG00000039953) MRPS33 (ENSRROG00000036028) ENSRROG00000012111 BRAF (ENSRROG00000010145) NDUFB2 (ENSRROG00000029902) ADCK2 (ENSRROG00000044522) DENND2A (ENSRROG00000034382) MKRN1 (ENSRROG00000037557) ##22 Platyrrhini ANCESTRAL SPECIES 10 ENSGT01100000263477.A.a.a ENSGT00910000144330 ENSGT00940000163413 ENSGT00940000161483 ENSGT00390000002796.q.a ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000146873 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.e.a ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Cebidae ANCESTRAL SPECIES 9 ENSGT01100000263477.A.a.a ENSGT00910000144330 ENSGT00940000163413 ENSGT00940000161483 ENSGT00390000002796.q.a ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000146873 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.e.a ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Marmoset MODERN SPECIES 20 ENSCJAG00000077616 ENSCJAG00000004026 PRSS37 (ENSCJAG00000013663) SSBP1 (ENSCJAG00000013650) WEE2 (ENSCJAG00000013627) DENND11 (ENSCJAG00000013621) AGK (ENSCJAG00000013589) TMEM178B (ENSCJAG00000013588) ENSCJAG00000086471 ENSCJAG00000081978 BRAF (ENSCJAG00000013536) NDUFB2 (ENSCJAG00000013524) ADCK2 (ENSCJAG00000013509) ENSCJAG00000074335 DENND2A (ENSCJAG00000013487) MKRN1 (ENSCJAG00000013474) ##22 RAB19 (ENSCJAG00000013457) ENSCJAG00000013424 ENSCJAG00000083981 KDM7A (ENSCJAG00000013403) PARP12 (ENSCJAG00000013351) TBXAS1 (ENSCJAG00000013325) HIPK2 (ENSCJAG00000013263) CLEC2L (ENSCJAG00000013258) KLRG2 (ENSCJAG00000032351) LUC7L2 (ENSCJAG00000013198) FMC1 (ENSCJAG00000071800) UBN2 (ENSCJAG00000013176) TTC26 (ENSCJAG00000013133) ENSCJAG00000080784 ZC3HAV1 (ENSCJAG00000013080) Cebidae_a ANCESTRAL SPECIES 33 ENSGT00940000161540 ENSGT00910000144330 ENSGT00940000163413 ENSGT00940000161483 ENSGT00390000002796.q.a ENSGT00940000158803 ENSGT00590000083189 ENSGT00910000146873 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.e.a ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Capuchin MODERN SPECIES 260 ENSCCAG00000030808 CLEC5A (ENSCCAG00000023805) OR9A4 (ENSCCAG00000037742) PRSS37 (ENSCCAG00000030678) ENSCCAG00000037419 WEE2 (ENSCCAG00000033355) DENND11 (ENSCCAG00000024825) AGK (ENSCCAG00000036439) TMEM178B (ENSCCAG00000032284) ENSCCAG00000035520 ENSCCAG00000027727 BRAF (ENSCCAG00000031128) NDUFB2 (ENSCCAG00000029688) ENSCCAG00000008528 DENND2A (ENSCCAG00000027573) MKRN1 (ENSCCAG00000037582) ##22 RAB19 (ENSCCAG00000029268) SLC37A3 (ENSCCAG00000026819) ENSCCAG00000028375 KDM7A (ENSCCAG00000036194) PARP12 (ENSCCAG00000032426) TBXAS1 (ENSCCAG00000032748) HIPK2 (ENSCCAG00000034723) CLEC2L (ENSCCAG00000032456) KLRG2 (ENSCCAG00000027319) ENSCCAG00000024159 FMC1-LUC7L2 (ENSCCAG00000023339) UBN2 (ENSCCAG00000034946) ENSCCAG00000018712 ENSCCAG00000032814 ZC3HAV1 (ENSCCAG00000028272) Mas night monkey MODERN SPECIES 984 MGAM (ENSANAG00000026732) CLEC5A (ENSANAG00000023741) ENSANAG00000013359 PRSS37 (ENSANAG00000025837) SSBP1 (ENSANAG00000021855) WEE2 (ENSANAG00000028062) DENND11 (ENSANAG00000025741) ENSANAG00000025415 AGK (ENSANAG00000034272) ENSANAG00000035332 ENSANAG00000036985 BRAF (ENSANAG00000030685) NDUFB2 (ENSANAG00000024539) ADCK2 (ENSANAG00000031411) DENND2A (ENSANAG00000034617) MKRN1 (ENSANAG00000036978) ##22 RAB19 (ENSANAG00000031005) SLC37A3 (ENSANAG00000036220) KDM7A (ENSANAG00000020956) PARP12 (ENSANAG00000027023) TBXAS1 (ENSANAG00000027587) HIPK2 (ENSANAG00000020026) CLEC2L (ENSANAG00000037151) KLRG2 (ENSANAG00000032234) LUC7L2 (ENSANAG00000024316) FMC1 (ENSANAG00000038230) UBN2 (ENSANAG00000008129) TTC26 (ENSANAG00000036584) ENSANAG00000036339 ZC3HAV1 (ENSANAG00000025650) ZC3HAV1L (ENSANAG00000023860) Tarsier MODERN SPECIES 4394 MKRN1 (ENSTSYG00000009996) ##22 RAB19 (ENSTSYG00000027542) SLC37A3 (ENSTSYG00000013268) KDM7A (ENSTSYG00000006335) Strepsirrhini ANCESTRAL SPECIES 9 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Bushbaby MODERN SPECIES 164 CLEC5A (ENSOGAG00000011563) OR9A4 (ENSOGAG00000029429) OR9A1P (ENSOGAG00000025142) PRSS37 (ENSOGAG00000016666) TAS2R3 (ENSOGAG00000034844) SSBP1 (ENSOGAG00000016661) ENSOGAG00000032705 DENND11 (ENSOGAG00000016654) AGK (ENSOGAG00000016647) ENSOGAG00000027045 MRPS33 (ENSOGAG00000017200) BRAF (ENSOGAG00000009646) NDUFB2 (ENSOGAG00000009644) ADCK2 (ENSOGAG00000009639) DENND2A (ENSOGAG00000031447) MKRN1 (ENSOGAG00000009877) ##22 RAB19 (ENSOGAG00000009876) SLC37A3 (ENSOGAG00000029064) KDM7A (ENSOGAG00000007678) PARP12 (ENSOGAG00000008906) TBXAS1 (ENSOGAG00000008899) HIPK2 (ENSOGAG00000034445) CLEC2L (ENSOGAG00000033021) KLRG2 (ENSOGAG00000029695) LUC7L2 (ENSOGAG00000016722) UBN2 (ENSOGAG00000027632) TTC26 (ENSOGAG00000010483) ZC3HAV1 (ENSOGAG00000010481) ZC3HAV1L (ENSOGAG00000007169) KIAA1549 (ENSOGAG00000032075) TMEM213 (ENSOGAG00000032782) Euarchontoglires_A ANCESTRAL SPECIES 17 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Glires ANCESTRAL SPECIES 18 ENSGT00910000144330 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Rodentia ANCESTRAL SPECIES 12 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Rodentia_A ANCESTRAL SPECIES 12 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Sciuridae ANCESTRAL SPECIES 7 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Marmotini ANCESTRAL SPECIES 32 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.y.a ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Marmotini_b ANCESTRAL SPECIES 117 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.y.a ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139.i ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Arctic ground squirrel MODERN SPECIES 318 PRSS37 (ENSUPAG00010016052) ENSUPAG00010016047 TAS2R4 (ENSUPAG00010016043) ENSUPAG00010016035 SSBP1 (ENSUPAG00010016004) WEE2 (ENSUPAG00010015989) DENND11 (ENSUPAG00010015983) AGK (ENSUPAG00010015967) TMEM178B (ENSUPAG00010015946) MRPS33 (ENSUPAG00010015943) ENSUPAG00010015929 BRAF (ENSUPAG00010015886) NDUFB2 (ENSUPAG00010015866) ADCK2 (ENSUPAG00010015851) DENND2A (ENSUPAG00010015818) MKRN1 (ENSUPAG00010015763) ##22 RAB19 (ENSUPAG00010015754) ENSUPAG00010015737 KDM7A (ENSUPAG00010015626) PARP12 (ENSUPAG00010015611) TBXAS1 (ENSUPAG00010015595) CLEC2L (ENSUPAG00010015587) HIPK2 (ENSUPAG00010015519) KLRG2 (ENSUPAG00010015492) LUC7L2 (ENSUPAG00010015402) FMC1 (ENSUPAG00010015389) Alpin marmot MODERN SPECIES 35 ENSMMMG00000011201 TAS2R4 (ENSMMMG00000011210) ENSMMMG00000011214 SSBP1 (ENSMMMG00000011224) WEE2 (ENSMMMG00000011258) DENND11 (ENSMMMG00000011283) AGK (ENSMMMG00000011318) TMEM178B (ENSMMMG00000011372) ENSMMMG00000011406 ENSMMMG00000011416 ENSMMMG00000011427 BRAF (ENSMMMG00000011443) NDUFB2 (ENSMMMG00000011455) ADCK2 (ENSMMMG00000011466) DENND2A (ENSMMMG00000011518) MKRN1 (ENSMMMG00000011534) ##22 ENSMMMG00000011544 KDM7A (ENSMMMG00000011574) PARP12 (ENSMMMG00000011607) TBXAS1 (ENSMMMG00000011724) HIPK2 (ENSMMMG00000011732) ENSMMMG00000011796 LUC7L2 (ENSMMMG00000011807) FMC1 (ENSMMMG00000011865) UBN2 (ENSMMMG00000011875) TTC26 (ENSMMMG00000011900) ZC3HAV1 (ENSMMMG00000011925) ZC3HAV1L (ENSMMMG00000011937) ENSMMMG00000011952 ENSMMMG00000011957 TMEM213 (ENSMMMG00000011972) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 17 OR9A1P (ENSSVLG00005010283) PRSS37 (ENSSVLG00005010291) ENSSVLG00005010344 ENSSVLG00005010410 SSBP1 (ENSSVLG00005010423) ENSSVLG00005010476 DENND11 (ENSSVLG00005010569) AGK (ENSSVLG00005010726) TMEM178B (ENSSVLG00005010943) MRPS33 (ENSSVLG00005011000) ENSSVLG00005011057 BRAF (ENSSVLG00005011137) NDUFB2 (ENSSVLG00005011276) ADCK2 (ENSSVLG00005011400) DENND2A (ENSSVLG00005011668) ENSSVLG00005012011 ##22 ENSSVLG00005012241 ##22 RAB19 (ENSSVLG00005012313) ENSSVLG00005012379 KDM7A (ENSSVLG00005012470) PARP12 (ENSSVLG00005012700) TBXAS1 (ENSSVLG00005012901) ENSSVLG00005013242 CLEC2L (ENSSVLG00005013292) ENSSVLG00005013322 KLRG2 (ENSSVLG00005013366) ENSSVLG00005013655 FMC1 (ENSSVLG00005013741) UBN2 (ENSSVLG00005013924) TTC26 (ENSSVLG00005014352) ENSSVLG00005015458 Eurasian red squirrel MODERN SPECIES 130 ENSSVLG00005017392 ##22 Rodentia_B ANCESTRAL SPECIES 9 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Myomorpha ANCESTRAL SPECIES 8 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Muroidea ANCESTRAL SPECIES 8 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Upper Galilee mountains blind mole rat MODERN SPECIES 1840 Or9a7 (ENSNGAG00000017910) Prss37 (ENSNGAG00000000102) Tas2r108 (ENSNGAG00000015066) Tas2r137 (ENSNGAG00000016702) Ssbp1 (ENSNGAG00000014269) ENSNGAG00000019527 Dennd11 (ENSNGAG00000011955) Agk (ENSNGAG00000007692) ENSNGAG00000021460 Mrps33 (ENSNGAG00000014172) ENSNGAG00000011360 Braf (ENSNGAG00000014000) Ndufb2 (ENSNGAG00000016898) Adck2 (ENSNGAG00000010919) Dennd2a (ENSNGAG00000016156) Mkrn1 (ENSNGAG00000019077) ##22 Rab19 (ENSNGAG00000017844) ENSNGAG00000007888 Kdm7a (ENSNGAG00000010381) Parp12 (ENSNGAG00000015925) Tbxas1 (ENSNGAG00000016895) Hipk2 (ENSNGAG00000010345) Clec2l (ENSNGAG00000004829) Klrg2 (ENSNGAG00000016229) Luc7l2 (ENSNGAG00000015693) Fmc1 (ENSNGAG00000006841) Ubn2 (ENSNGAG00000019334) Ttc26 (ENSNGAG00000011531) Zc3hav1 (ENSNGAG00000016695) Zc3hav1l (ENSNGAG00000001243) D630045J12Rik (ENSNGAG00000014130) Muroidea_A ANCESTRAL SPECIES 4 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Murinae ANCESTRAL SPECIES 4 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Rat MODERN SPECIES 14 Tas2r138 (ENSRNOG00000026225) Clec5a (ENSRNOG00000026306) Or9a4 (ENSRNOG00000066955) Prss37 (ENSRNOG00000012201) Tas2r108 (ENSRNOG00000012195) Tas2r137 (ENSRNOG00000030413) Ssbp1 (ENSRNOG00000012100) Wee2 (ENSRNOG00000026446) Dennd11 (ENSRNOG00000011854) Agk (ENSRNOG00000011509) Tmem178b (ENSRNOG00000047635) Mrps33 (ENSRNOG00000026528) Braf (ENSRNOG00000010957) Ndufb2 (ENSRNOG00000010005) Dennd2a (ENSRNOG00000026748) Mkrn1 (ENSRNOG00000009280) ##22 Rab19 (ENSRNOG00000009030) Slc37a3 (ENSRNOG00000008725) Chmp4bl1 (ENSRNOG00000034071) Kdm7a (ENSRNOG00000052445) Parp12 (ENSRNOG00000008196) Tbxas1 (ENSRNOG00000007918) Clec2l (ENSRNOG00000029644) Klrg2 (ENSRNOG00000006814) LOC120102490 (ENSRNOG00000027445) Luc7l2 (ENSRNOG00000006001) Fmc1 (ENSRNOG00000005618) Ubn2 (ENSRNOG00000005564) Ttc26 (ENSRNOG00000027617) Zc3hav1 (ENSRNOG00000013948) Zc3hav1l (ENSRNOG00000013944) Mus ANCESTRAL SPECIES 20 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Shrew mouse MODERN SPECIES 11 Or9a4 (MGP_PahariEiJ_G0022019) Prss37 (MGP_PahariEiJ_G0022018) Tas2r108 (MGP_PahariEiJ_G0022017) MGP_PahariEiJ_G0022016 Ssbp1 (MGP_PahariEiJ_G0022015) Wee2 (MGP_PahariEiJ_G0022014) Dennd11 (MGP_PahariEiJ_G0022013) Agk (MGP_PahariEiJ_G0022012) MGP_PahariEiJ_G0022011 Mrps33 (MGP_PahariEiJ_G0022010) Braf (MGP_PahariEiJ_G0022009) Ndufb2 (MGP_PahariEiJ_G0022008) MGP_PahariEiJ_G0022007 Adck2 (MGP_PahariEiJ_G0022006) Dennd2a (MGP_PahariEiJ_G0022005) Mkrn1 (MGP_PahariEiJ_G0022004) ##22 Rab19 (MGP_PahariEiJ_G0022003) MGP_PahariEiJ_G0022002 Kdm7a (MGP_PahariEiJ_G0022001) Parp12 (MGP_PahariEiJ_G0022000) Tbxas1 (MGP_PahariEiJ_G0021999) MGP_PahariEiJ_G0021998 Clec2l (MGP_PahariEiJ_G0021997) MGP_PahariEiJ_G0021996 Klrg2 (MGP_PahariEiJ_G0021995) Luc7l2 (MGP_PahariEiJ_G0021994) Fmc1 (MGP_PahariEiJ_G0021993) Ubn2 (MGP_PahariEiJ_G0021992) Ttc26 (MGP_PahariEiJ_G0021991) Zc3hav1 (MGP_PahariEiJ_G0021990) Zc3hav1l (MGP_PahariEiJ_G0021989) Mus_A ANCESTRAL SPECIES 7 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.s ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Mus_B ANCESTRAL SPECIES 20 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.s ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Mouse MODERN SPECIES 15 Or9a4 (ENSMUSG00000045514) Or9a7 (ENSMUSG00000068259) Prss37 (ENSMUSG00000029909) Tas2r108 (ENSMUSG00000037140) Tas2r137 (ENSMUSG00000052850) Ssbp1 (ENSMUSG00000029911) Wee2 (ENSMUSG00000037159) Dennd11 (ENSMUSG00000037172) Agk (ENSMUSG00000029916) Tmem178b (ENSMUSG00000057716) Mrps33 (ENSMUSG00000029918) Braf (ENSMUSG00000002413) Ndufb2 (ENSMUSG00000002416) Adck2 (ENSMUSG00000046947) Dennd2a (ENSMUSG00000038456) Mkrn1 (ENSMUSG00000029922) ##22 Rab19 (ENSMUSG00000029923) Slc37a3 (ENSMUSG00000029924) Kdm7a (ENSMUSG00000042599) Parp12 (ENSMUSG00000038507) Tbxas1 (ENSMUSG00000029925) Hipk2 (ENSMUSG00000061436) Clec2l (ENSMUSG00000079598) Klrg2 (ENSMUSG00000071537) Luc7l2 (ENSMUSG00000029823) Fmc1 (ENSMUSG00000019689) Ubn2 (ENSMUSG00000038538) Ttc26 (ENSMUSG00000056832) Zc3hav1 (ENSMUSG00000029826) Zc3hav1l (ENSMUSG00000047749) D630045J12Rik (ENSMUSG00000063455) Mus_C ANCESTRAL SPECIES 19 ENSGT00910000144330 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.s ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Steppe mouse MODERN SPECIES 3159 Or9a7 (ENSMSIG00000002837) Prss37 (ENSMSIG00000002853) Tas2r108 (ENSMSIG00000002885) Tas2r137 (ENSMSIG00000002897) Ssbp1 (ENSMSIG00000002905) Wee2 (ENSMSIG00000002990) Dennd11 (ENSMSIG00000003036) Agk (ENSMSIG00000003072) ENSMSIG00000003101 ENSMSIG00000003115 Braf (ENSMSIG00000003138) Ndufb2 (ENSMSIG00000003342) Adck2 (ENSMSIG00000003366) Dennd2a (ENSMSIG00000003496) ENSMSIG00000003618 Mkrn1 (ENSMSIG00000003580) ##22 Rab19 (ENSMSIG00000003633) Slc37a3 (ENSMSIG00000003657) Kdm7a (ENSMSIG00000003734) Parp12 (ENSMSIG00000003821) Tbxas1 (ENSMSIG00000003914) Hipk2 (ENSMSIG00000004039) ENSMSIG00000004303 Klrg2 (ENSMSIG00000004359) Luc7l2 (ENSMSIG00000004403) ENSMSIG00000004541 ENSMSIG00000004548 spretus MODERN SPECIES 15 MGP_SPRETEiJ_G0029260 Prss37 (MGP_SPRETEiJ_G0029259) Tas2r108 (MGP_SPRETEiJ_G0029258) MGP_SPRETEiJ_G0029257 Ssbp1 (MGP_SPRETEiJ_G0029256) Wee2 (MGP_SPRETEiJ_G0029255) Dennd11 (MGP_SPRETEiJ_G0029254) Agk (MGP_SPRETEiJ_G0029253) MGP_SPRETEiJ_G0029252 Mrps33 (MGP_SPRETEiJ_G0029251) Braf (MGP_SPRETEiJ_G0029250) Ndufb2 (MGP_SPRETEiJ_G0029249) MGP_SPRETEiJ_G0029248 Adck2 (MGP_SPRETEiJ_G0029247) Dennd2a (MGP_SPRETEiJ_G0029246) Mkrn1 (MGP_SPRETEiJ_G0029245) ##22 Rab19 (MGP_SPRETEiJ_G0029244) Slc37a3 (MGP_SPRETEiJ_G0029243) Kdm7a (MGP_SPRETEiJ_G0029242) Parp12 (MGP_SPRETEiJ_G0029241) Tbxas1 (MGP_SPRETEiJ_G0029240) Hipk2 (MGP_SPRETEiJ_G0029239) Clec2l (MGP_SPRETEiJ_G0029238) Klrg2 (MGP_SPRETEiJ_G0029237) Luc7l2 (MGP_SPRETEiJ_G0029236) Fmc1 (MGP_SPRETEiJ_G0029235) Ubn2 (MGP_SPRETEiJ_G0029234) Ttc26 (MGP_SPRETEiJ_G0029233) Zc3hav1 (MGP_SPRETEiJ_G0029232) Zc3hav1l (MGP_SPRETEiJ_G0029231) D630045J12Rik (MGP_SPRETEiJ_G0029230) Ryukyu mouse MODERN SPECIES 15 Or9a7 (MGP_CAROLIEiJ_G0028261) Prss37 (MGP_CAROLIEiJ_G0028260) Tas2r108 (MGP_CAROLIEiJ_G0028259) MGP_CAROLIEiJ_G0028258 Ssbp1 (MGP_CAROLIEiJ_G0028257) Wee2 (MGP_CAROLIEiJ_G0028256) Dennd11 (MGP_CAROLIEiJ_G0028255) Agk (MGP_CAROLIEiJ_G0028254) MGP_CAROLIEiJ_G0028253 Mrps33 (MGP_CAROLIEiJ_G0028252) Braf (MGP_CAROLIEiJ_G0028251) Ndufb2 (MGP_CAROLIEiJ_G0028250) MGP_CAROLIEiJ_G0028249 Adck2 (MGP_CAROLIEiJ_G0028248) Dennd2a (MGP_CAROLIEiJ_G0028247) Mkrn1 (MGP_CAROLIEiJ_G0028246) ##22 Rab19 (MGP_CAROLIEiJ_G0028245) MGP_CAROLIEiJ_G0028244 MGP_CAROLIEiJ_G0028243 Parp12 (MGP_CAROLIEiJ_G0028242) Tbxas1 (MGP_CAROLIEiJ_G0028241) Hipk2 (MGP_CAROLIEiJ_G0028240) Clec2l (MGP_CAROLIEiJ_G0028239) Klrg2 (MGP_CAROLIEiJ_G0028238) Luc7l2 (MGP_CAROLIEiJ_G0028237) Fmc1 (MGP_CAROLIEiJ_G0028236) Ubn2 (MGP_CAROLIEiJ_G0028235) Ttc26 (MGP_CAROLIEiJ_G0028234) Zc3hav1 (MGP_CAROLIEiJ_G0028233) Zc3hav1l (MGP_CAROLIEiJ_G0028232) D630045J12Rik (MGP_CAROLIEiJ_G0028231) Cricetidae ANCESTRAL SPECIES 3 ENSGT00910000144330 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044.w ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Cricetinae ANCESTRAL SPECIES 23 ENSGT00910000144330 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044.w ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00950000183077.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Chinese hamster chok1gshd MODERN SPECIES 54 Crot (ENSCGRG00001023042) Prss37 (ENSCGRG00001018297) Tas2r108 (ENSCGRG00001010522) Tas2r137 (ENSCGRG00001009992) ENSCGRG00001015635 Wee2 (ENSCGRG00001006258) Dennd11 (ENSCGRG00001015156) Agk (ENSCGRG00001013723) ENSCGRG00001012889 Mrps33 (ENSCGRG00001000348) ENSCGRG00001023061 Braf (ENSCGRG00001021906) Ndufb2 (ENSCGRG00001008411) Adck2 (ENSCGRG00001016753) Dennd2a (ENSCGRG00001013315) Mkrn1 (ENSCGRG00001016621) ##22 ENSCGRG00001013880 Rab19 (ENSCGRG00001003148) Slc37a3 (ENSCGRG00001009575) Kdm7a (ENSCGRG00001009052) Parp12 (ENSCGRG00001010916) Tbxas1 (ENSCGRG00001015983) Hipk2 (ENSCGRG00001023661) Clec2l (ENSCGRG00001017491) Klrg2 (ENSCGRG00001015691) Luc7l2 (ENSCGRG00001019847) Fmc1 (ENSCGRG00001017206) Ubn2 (ENSCGRG00001000429) ENSCGRG00001008024 Ttc26 (ENSCGRG00001000244) Zc3hav1 (ENSCGRG00001014912) Cricetidae_B ANCESTRAL SPECIES 10 ENSGT00910000144330 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044.w ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Northern American deer mouse MODERN SPECIES 16 Clec5a (ENSPEMG00000017851) Or9a4 (ENSPEMG00000009189) Prss37 (ENSPEMG00000017152) Tas2r108 (ENSPEMG00000026064) Tas2r137 (ENSPEMG00000013488) Ssbp1 (ENSPEMG00000011838) Wee2 (ENSPEMG00000012913) Dennd11 (ENSPEMG00000009508) Agk (ENSPEMG00000018886) ENSPEMG00000016644 ENSPEMG00000021616 Braf (ENSPEMG00000001337) ENSPEMG00000023701 Adck2 (ENSPEMG00000021773) Dennd2a (ENSPEMG00000021909) Mkrn1 (ENSPEMG00000023646) ##22 Rab19 (ENSPEMG00000006800) Slc37a3 (ENSPEMG00000023926) Kdm7a (ENSPEMG00000007158) Parp12 (ENSPEMG00000023375) Tbxas1 (ENSPEMG00000012189) Hipk2 (ENSPEMG00000024177) Clec2l (ENSPEMG00000023147) Klrg2 (ENSPEMG00000022260) Luc7l2 (ENSPEMG00000022741) Fmc1 (ENSPEMG00000017395) Ubn2 (ENSPEMG00000016528) Ttc26 (ENSPEMG00000011132) ENSPEMG00000027037 ENSPEMG00000028208 Zc3hav1 (ENSPEMG00000015140) Prairie vole MODERN SPECIES 87 ENSMOCG00000013070 Clec5a (ENSMOCG00000016188) Or9a4 (ENSMOCG00000002678) Prss37 (ENSMOCG00000000882) Ssbp1 (ENSMOCG00000015007) Wee2 (ENSMOCG00000000778) Dennd11 (ENSMOCG00000018809) Agk (ENSMOCG00000003528) ENSMOCG00000000534 ENSMOCG00000020593 ENSMOCG00000016152 Braf (ENSMOCG00000023027) ENSMOCG00000016120 Adck2 (ENSMOCG00000021171) Dennd2a (ENSMOCG00000012296) Mkrn1 (ENSMOCG00000006155) ##22 Rab19 (ENSMOCG00000000473) ENSMOCG00000018385 Slc37a3 (ENSMOCG00000013977) Kdm7a (ENSMOCG00000012739) Parp12 (ENSMOCG00000002228) Tbxas1 (ENSMOCG00000021725) Hipk2 (ENSMOCG00000013517) Clec2l (ENSMOCG00000011286) ENSMOCG00000007675 ENSMOCG00000008820 Luc7l2 (ENSMOCG00000014631) Fmc1 (ENSMOCG00000010863) Ubn2 (ENSMOCG00000014721) Ttc26 (ENSMOCG00000022442) Zc3hav1 (ENSMOCG00000004943) Laurasiatheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.a ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.a ##22 Laurasiatheria_c ANCESTRAL SPECIES 13 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Equus ANCESTRAL SPECIES 13 ENSGT00940000161540 ENSGT00910000144330 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Horse MODERN SPECIES 25 CLEC5A (ENSECAG00000008727) OR9A4 (ENSECAG00000008580) PRSS37 (ENSECAG00000007637) SSBP1 (ENSECAG00000004023) WEE2 (ENSECAG00000021800) DENND11 (ENSECAG00000019877) ENSECAG00000050131 AGK (ENSECAG00000014211) ENSECAG00000029769 ENSECAG00000054503 ENSECAG00000014200 MRPS33 (ENSECAG00000013649) BRAF (ENSECAG00000002746) ADCK2 (ENSECAG00000023917) DENND2A (ENSECAG00000020307) MKRN1 (ENSECAG00000017929) ##22 RAB19 (ENSECAG00000015540) SLC37A3 (ENSECAG00000010329) KDM7A (ENSECAG00000002716) PARP12 (ENSECAG00000022601) TBXAS1 (ENSECAG00000017160) HIPK2 (ENSECAG00000008927) CLEC2L (ENSECAG00000017090) KLRG2 (ENSECAG00000031250) LUC7L2 (ENSECAG00000024679) ENSECAG00000055953 UBN2 (ENSECAG00000023410) TTC26 (ENSECAG00000019531) ENSECAG00000045126 ZC3HAV1 (ENSECAG00000017394) ZC3HAV1L (ENSECAG00000017385) Donkey MODERN SPECIES CLEC5A (ENSEASG00005009851) OR9A4 (ENSEASG00005033752) OR9A1P (ENSEASG00005032409) PRSS37 (ENSEASG00005009865) ENSEASG00005009871 WEE2 (ENSEASG00005009874) DENND11 (ENSEASG00005009876) AGK (ENSEASG00005009879) ENSEASG00005009882 TMEM178B (ENSEASG00005009886) MRPS33 (ENSEASG00005009896) BRAF (ENSEASG00005009899) NDUFB2 (ENSEASG00005009906) ADCK2 (ENSEASG00005009907) DENND2A (ENSEASG00005009911) MKRN1 (ENSEASG00005009917) ##22 RAB19 (ENSEASG00005009919) SLC37A3 (ENSEASG00005009922) KDM7A (ENSEASG00005009924) PARP12 (ENSEASG00005009926) TBXAS1 (ENSEASG00005009927) HIPK2 (ENSEASG00005009930) CLEC2L (ENSEASG00005009932) KLRG2 (ENSEASG00005025265) LUC7L2 (ENSEASG00005009939) ENSEASG00005026684 UBN2 (ENSEASG00005009942) TTC26 (ENSEASG00005009948) ZC3HAV1 (ENSEASG00005010064) ZC3HAV1L (ENSEASG00005010306) KIAA1549 (ENSEASG00005010313) Artiodactyla ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.a ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.a ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.a ##22 Cetacea ANCESTRAL SPECIES 13 ENSGT01100000263477.A.a.a ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.hb ENSGT00940000156154 ENSGT00390000004044.hb ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Odontoceti ANCESTRAL SPECIES 12 ENSGT01100000263477.A.a.a ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.hb ENSGT00940000156154 ENSGT00390000004044.hb ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Odontoceti_a ANCESTRAL SPECIES 13 ENSGT00940000161540 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.hb ENSGT00940000156154 ENSGT00390000004044.hb ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a.p.b ENSGT00390000012258 ENSGT00950000183213.a.a.a.p.a ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Odontoceti_b ANCESTRAL SPECIES 13 ENSGT00940000161540 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.hb ENSGT00940000156154 ENSGT00390000004044.hb.b ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a.p.a ENSGT00950000183213.a.a.a.p.b ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Monodontidae ANCESTRAL SPECIES 12 ENSGT00530000063085.A.a ENSGT00940000161540 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.hb ENSGT00940000156154 ENSGT00390000004044.hb.b ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a.p.b ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Beluga whale MODERN SPECIES 72 ENSDLEG00000018001 MGAM (ENSDLEG00000018505) PRSS37 (ENSDLEG00000021026) TAS2R4 (ENSDLEG00000021030) SSBP1 (ENSDLEG00000021032) WEE2 (ENSDLEG00000021040) KIAA1147 (ENSDLEG00000021048) AGK (ENSDLEG00000021057) ENSDLEG00000021067 ENSDLEG00000021072 MRPS33 (ENSDLEG00000021075) BRAF (ENSDLEG00000021077) ENSDLEG00000021093 ADCK2 (ENSDLEG00000021096) DENND2A (ENSDLEG00000021099) MKRN1 (ENSDLEG00000021109) ##22 RAB19 (ENSDLEG00000021111) ENSDLEG00000021115 ENSDLEG00000021116 KDM7A (ENSDLEG00000021119) PARP12 (ENSDLEG00000021124) TBXAS1 (ENSDLEG00000021152) HIPK2 (ENSDLEG00000021269) CLEC2L (ENSDLEG00000021273) KLRG2 (ENSDLEG00000021276) ENSDLEG00000021279 UBN2 (ENSDLEG00000021288) TTC26 (ENSDLEG00000021297) ZC3HAV1 (ENSDLEG00000021303) ZC3HAV1L (ENSDLEG00000021308) KIAA1549 (ENSDLEG00000021311) Narwhal MODERN SPECIES 306 ENSMMNG00015011527 MGAM (ENSMMNG00015010883) PRSS37 (ENSMMNG00015010392) TAS2R4 (ENSMMNG00015010372) TAS2R3 (ENSMMNG00015010363) SSBP1 (ENSMMNG00015010343) WEE2 (ENSMMNG00015010311) DENND11 (ENSMMNG00015010294) AGK (ENSMMNG00015010245) TMEM178B (ENSMMNG00015010207) ENSMMNG00015010197 BRAF (ENSMMNG00015010154) ENSMMNG00015010116 ADCK2 (ENSMMNG00015010091) DENND2A (ENSMMNG00015010068) MKRN1 (ENSMMNG00015010057) ##22 RAB19 (ENSMMNG00015010050) ENSMMNG00015010018 KDM7A (ENSMMNG00015009995) PARP12 (ENSMMNG00015009981) TBXAS1 (ENSMMNG00015009967) HIPK2 (ENSMMNG00015009944) CLEC2L (ENSMMNG00015009934) KLRG2 (ENSMMNG00015009924) LUC7L2 (ENSMMNG00015009905) FMC1 (ENSMMNG00015009890) UBN2 (ENSMMNG00015009787) TTC26 (ENSMMNG00015009739) ZC3HAV1 (ENSMMNG00015009713) ZC3HAV1L (ENSMMNG00015009700) KIAA1549 (ENSMMNG00015009665) Vaquita MODERN SPECIES 20 ENSPSNG00000013730 MGAM (ENSPSNG00000013851) PRSS37 (ENSPSNG00000014654) TAS2R5 (ENSPSNG00000014749) TAS2R4 (ENSPSNG00000014812) SSBP1 (ENSPSNG00000015143) WEE2 (ENSPSNG00000015224) DENND11 (ENSPSNG00000015409) AGK (ENSPSNG00000015653) TMEM178B (ENSPSNG00000015985) ENSPSNG00000016049 BRAF (ENSPSNG00000016141) ENSPSNG00000016266 ADCK2 (ENSPSNG00000016397) DENND2A (ENSPSNG00000016464) MKRN1 (ENSPSNG00000016640) ##22 RAB19 (ENSPSNG00000016717) ENSPSNG00000016803 KDM7A (ENSPSNG00000016893) PARP12 (ENSPSNG00000016948) TBXAS1 (ENSPSNG00000017057) HIPK2 (ENSPSNG00000017934) CLEC2L (ENSPSNG00000017991) KLRG2 (ENSPSNG00000018046) LUC7L2 (ENSPSNG00000018181) UBN2 (ENSPSNG00000018334) TTC26 (ENSPSNG00000018553) ZC3HAV1 (ENSPSNG00000018803) ZC3HAV1L (ENSPSNG00000018839) KIAA1549 (ENSPSNG00000018897) TMEM213 (ENSPSNG00000019183) Dolphin MODERN SPECIES 1667 MKRN1 (ENSTTRG00000009528) ##22 RAB19 (ENSTTRG00000009527) ENSTTRG00000009525 KDM7A (ENSTTRG00000009520) Atlantogenata ANCESTRAL SPECIES 60 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Xenarthra ANCESTRAL SPECIES 497 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 Sloth MODERN SPECIES 2608 MKRN1 (ENSCHOG00000011015) ##22 Armadillo MODERN SPECIES 914 TMEM178B (ENSDNOG00000046395) ENSDNOG00000033448 MRPS33 (ENSDNOG00000036574) BRAF (ENSDNOG00000006176) ENSDNOG00000007673 ADCK2 (ENSDNOG00000041100) DENND2A (ENSDNOG00000018918) MKRN1 (ENSDNOG00000049394) ##22 RAB19 (ENSDNOG00000048024) ENSDNOG00000009418 KDM7A (ENSDNOG00000009716) Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.a ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.a ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.a ##22 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.a ##22 Hedgehog MODERN SPECIES 11161 ENSEEUG00000001133 ##22 Eutheria DUPLICATION Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a ##22 Atlantogenata ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a ##22 Xenarthra ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a ##22 Armadillo MODERN SPECIES 2156 ENSDNOG00000048828 OASL (ENSDNOG00000035785) ENSDNOG00000000382 HNF1A (ENSDNOG00000000374) SPPL3 (ENSDNOG00000016589) ENSDNOG00000038333 ##22 ACADS (ENSDNOG00000030594) UNC119B (ENSDNOG00000039143) MLEC (ENSDNOG00000011615) ENSDNOG00000042834 ENSDNOG00000012668 RNF10 (ENSDNOG00000012640) COQ5 (ENSDNOG00000012631) DYNLL1 (ENSDNOG00000031391) SRSF9 (ENSDNOG00000012598) GATC (ENSDNOG00000012593) TRIAP1 (ENSDNOG00000012588) COX6A1 (ENSDNOG00000042128) ENSDNOG00000040794 MSI1 (ENSDNOG00000005713) PLA2G1B (ENSDNOG00000046317) Boreoeutheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a ##22 Carnivora ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a ##22 Caniformia ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a ##22 Canidae ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a ##22 Canis_lupus ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a ##22 Dingo MODERN SPECIES 103 ENSCAFG00020023120 GPR22 (ENSCAFG00020023122) ENSCAFG00020023123 DUS4L (ENSCAFG00020023124) BCAP29 (ENSCAFG00020023125) SLC26A4 (ENSCAFG00020023128) CBLL1 (ENSCAFG00020023134) SLC26A3 (ENSCAFG00020023135) DLD (ENSCAFG00020023141) LAMB1 (ENSCAFG00020023144) ENSCAFG00020023147 NRCAM (ENSCAFG00020023159) PNPLA8 (ENSCAFG00020023247) ENSCAFG00020023253 NME8 (ENSCAFG00020023259) ENSCAFG00020023262 ##22 SFRP4 (ENSCAFG00020023264) EPDR1 (ENSCAFG00020023267) STARD3NL (ENSCAFG00020023276) ENSCAFG00020023281 ENSCAFG00020023285 ENSCAFG00020023288 ENSCAFG00020023292 ENSCAFG00020023304 ENSCAFG00020023307 ENSCAFG00020023310 ENSCAFG00020023314 ENSCAFG00020023317 AMPH (ENSCAFG00020023336) VPS41 (ENSCAFG00020023396) POU6F2 (ENSCAFG00020023412) Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a ##22 Primates ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a ##22 Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.a ##22 Hominoidea ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.a ##22 Hominidae ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.a ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.a ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.a ##22 Pan ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.a ##22 Chimpanzee MODERN SPECIES 972 MAGEE1 (ENSPTRG00000028246) ENSPTRG00000042933 PBDC1 (ENSPTRG00000022046) MAGEE2 (ENSPTRG00000022044) ENSPTRG00000047832 ENSPTRG00000045250 ZDHHC15 (ENSPTRG00000022041) ENSPTRG00000043149 UPRT (ENSPTRG00000022040) ABCB7 (ENSPTRG00000051934) NEXMIF (ENSPTRG00000045628) RLIM (ENSPTRG00000022037) SLC16A2 (ENSPTRG00000022036) ENSPTRG00000052595 ENSPTRG00000047834 ENSPTRG00000049646 ##22 ENSPTRG00000049815 CHIC1 (ENSPTRG00000028250) ENSPTRG00000051207 CDX4 (ENSPTRG00000022032) ENSPTRG00000043791 ENSPTRG00000028252 ENSPTRG00000050068 ENSPTRG00000048543 ENSPTRG00000045935 PHKA1 (ENSPTRG00000022029) HDAC8 (ENSPTRG00000051531) CITED1 (ENSPTRG00000022026) RPS4X (ENSPTRG00000022025) ERCC6L (ENSPTRG00000022023) PIN4 (ENSPTRG00000049495) Gorilla MODERN SPECIES 523 ENSGGOG00000027341 PBDC1 (ENSGGOG00000013084) MAGEE2 (ENSGGOG00000004206) ENSGGOG00000024006 ENSGGOG00000040631 ZDHHC15 (ENSGGOG00000004488) ENSGGOG00000024158 UPRT (ENSGGOG00000011666) ABCB7 (ENSGGOG00000015678) NEXMIF (ENSGGOG00000005315) RLIM (ENSGGOG00000000885) SLC16A2 (ENSGGOG00000009468) ENSGGOG00000023179 ENSGGOG00000023767 ZCCHC13 (ENSGGOG00000008056) ENSGGOG00000043038 ##22 ENSGGOG00000006280 CHIC1 (ENSGGOG00000010930) ENSGGOG00000037536 CDX4 (ENSGGOG00000005465) ENSGGOG00000041141 NAP1L2 (ENSGGOG00000026343) ENSGGOG00000043933 ENSGGOG00000038606 ENSGGOG00000013219 ENSGGOG00000026191 ENSGGOG00000001463 ENSGGOG00000039205 ENSGGOG00000024429 PHKA1 (ENSGGOG00000006781) HDAC8 (ENSGGOG00000011587) Gibbon MODERN SPECIES 449 MAGT1 (ENSNLEG00000001330) ATRX (ENSNLEG00000001144) FGF16 (ENSNLEG00000001138) ENSNLEG00000001137 PBDC1 (ENSNLEG00000001123) ENSNLEG00000032811 MAGEE2 (ENSNLEG00000001122) ENSNLEG00000001117 ZDHHC15 (ENSNLEG00000001084) ENSNLEG00000028296 ENSNLEG00000035174 ABCB7 (ENSNLEG00000001065) NEXMIF (ENSNLEG00000001059) RLIM (ENSNLEG00000001050) ENSNLEG00000001044 ENSNLEG00000030978 ##22 CHIC1 (ENSNLEG00000033690) ENSNLEG00000034883 CDX4 (ENSNLEG00000001025) NAP1L2 (ENSNLEG00000019044) ENSNLEG00000018128 ENSNLEG00000029617 ENSNLEG00000034046 ENSNLEG00000029049 ENSNLEG00000018125 PHKA1 (ENSNLEG00000018124) HDAC8 (ENSNLEG00000018123) CITED1 (ENSNLEG00000018122) ENSNLEG00000018121 ERCC6L (ENSNLEG00000036284) PIN4 (ENSNLEG00000036320) Cercopithecidae ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.a ##22 Rhinopithecus ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.a ##22 Golden snub-nosed monkey MODERN SPECIES 11 ENSRROG00000042070 ##22 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.a ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.a ##22 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.a ##22 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.a ##22 Sooty mangabey MODERN SPECIES 393 ENSCATG00000040281 ##22 ENSCATG00000033439 ENSCATG00000031804 CHIC1 (ENSCATG00000009658) ENSCATG00000000043 CDX4 (ENSCATG00000028737) Catarrhini ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.b ##22 Hominoidea ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.b ##22 Hominidae ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.b ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.b ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.a.b ##22 Pan ANCESTRAL SPECIES ENSGT00940000159643 ENSGT00940000155060.C.b ENSGT00390000005462 ENSGT00390000018402 ENSGT00390000011838 ENSGT01050000244838.H.d ENSGT00950000183104.A.a.a ENSGT00940000161225 ENSGT00940000157693 ENSGT00510000048988 ENSGT00390000003015 ENSGT00620000088018.h ENSGT00390000014984 ENSGT00390000006224.i.a ENSGT00940000156792 ENSGT00950000183077.a.a.a.a.a.b.b.a.a.b ##22 ENSGT00940000161958 ENSGT00910000147271 ENSGT00940000160531 ENSGT01050000245314 ENSGT00390000006113 ENSGT00940000154169.B ENSGT00390000003084 ENSGT00940000158725 ENSGT00940000158624 ENSGT00940000153341.b.p.a.b.b.b.b.h ENSGT00940000154721 ENSGT00390000007816 ENSGT00950000182834.C ENSGT00390000004248 ENSGT00390000014577.b Bonobo MODERN SPECIES PTPRF (ENSPPAG00000039997) ENSPPAG00000036269 SZT2 (ENSPPAG00000035487) MED8 (ENSPPAG00000035160) ELOVL1 (ENSPPAG00000042208) CDC20 (ENSPPAG00000030310) MPL (ENSPPAG00000011545) TIE1 (ENSPPAG00000036693) C1orf210 (ENSPPAG00000030446) TMEM125 (ENSPPAG00000021739) CFAP57 (ENSPPAG00000035146) EBNA1BP2 (ENSPPAG00000038260) CFAP144 (ENSPPAG00000041132) SLC2A1 (ENSPPAG00000033788) ENSPPAG00000029709 ENSPPAG00000026638 ##22 ZNF691 (ENSPPAG00000044114) ENSPPAG00000044007 ERMAP (ENSPPAG00000043399) ENSPPAG00000042204 SVBP (ENSPPAG00000030648) ENSPPAG00000014971 C1orf50 (ENSPPAG00000035504) P3H1 (ENSPPAG00000041313) CLDN19 (ENSPPAG00000039606) YBX1 (ENSPPAG00000030580) PPIH (ENSPPAG00000034314) CCDC30 (ENSPPAG00000032892) PPCS (ENSPPAG00000039580) ZMYND12 (ENSPPAG00000036047) RIMKLA (ENSPPAG00000033011) Chimpanzee MODERN SPECIES PTPRF (ENSPTRG00000000641) HYI (ENSPTRG00000000640) SZT2 (ENSPTRG00000000639) MED8 (ENSPTRG00000000636) ELOVL1 (ENSPTRG00000000635) CDC20 (ENSPTRG00000000634) MPL (ENSPTRG00000052236) TIE1 (ENSPTRG00000000631) C1H1orf210 (ENSPTRG00000051081) TMEM125 (ENSPTRG00000052836) CFAP57 (ENSPTRG00000000626) EBNA1BP2 (ENSPTRG00000000625) CFAP144 (ENSPTRG00000000624) SLC2A1 (ENSPTRG00000000623) ENSPTRG00000043011 ENSPTRG00000045063 ##22 ZNF691 (ENSPTRG00000000622) ENSPTRG00000049463 ERMAP (ENSPTRG00000000621) ENSPTRG00000050828 SVBP (ENSPTRG00000045258) TMEM269 (ENSPTRG00000048821) C1H1orf50 (ENSPTRG00000000618) P3H1 (ENSPTRG00000000617) CLDN19 (ENSPTRG00000000616) PPIH (ENSPTRG00000000614) CCDC30 (ENSPTRG00000024067) ENSPTRG00000011617 PPCS (ENSPTRG00000030660) ZMYND12 (ENSPTRG00000000608) RIMKLA (ENSPTRG00000000607) Gorilla MODERN SPECIES KDM4A (ENSGGOG00000009042) PTPRF (ENSGGOG00000009263) ENSGGOG00000012782 SZT2 (ENSGGOG00000012732) MED8 (ENSGGOG00000004931) ELOVL1 (ENSGGOG00000010431) CDC20 (ENSGGOG00000010419) MPL (ENSGGOG00000010413) TIE1 (ENSGGOG00000008745) C1orf210 (ENSGGOG00000042246) TMEM125 (ENSGGOG00000008740) CFAP57 (ENSGGOG00000008728) ENSGGOG00000008724 CFAP144 (ENSGGOG00000010892) SLC2A1 (ENSGGOG00000025318) ENSGGOG00000043521 ##22 ZNF691 (ENSGGOG00000009549) ERMAP (ENSGGOG00000007428) ENSGGOG00000037573 ENSGGOG00000038252 ENSGGOG00000027581 ENSGGOG00000005745 CLDN19 (ENSGGOG00000005739) ENSGGOG00000004758 PPIH (ENSGGOG00000022507) CCDC30 (ENSGGOG00000004124) PPCS (ENSGGOG00000026253) ZMYND12 (ENSGGOG00000004654) RIMKLA (ENSGGOG00000025939) FOXJ3 (ENSGGOG00000013618) GUCA2A (ENSGGOG00000011516) Eutheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.b ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.b ##22 Primates ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.b ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.b ##22 Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a ##22 Catarrhini ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a ##22 Hominoidea DUPLICATION Hominoidea ANCESTRAL SPECIES 19 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00390000013091.p ENSGT00940000159011 ENSGT00940000163752 ENSGT00490000044166 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950.g.a ENSGT00510000048363 ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a ##22 ENSGT00940000153505.a.b.b ENSGT00940000163051 ENSGT00940000154367.a ENSGT00940000163510.D ENSGT00940000153246.a.a.b ENSGT00940000153246.b ENSGT00890000139482 ENSGT00940000158695 ENSGT00390000016307 ENSGT00390000001733 ENSGT00390000002721 ENSGT00940000162270 ENSGT00390000004643 ENSGT00390000004522 ENSGT00950000182907.a.b.b.a.q.a Hominidae ANCESTRAL SPECIES 10 ENSGT00940000156081 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00390000013091.p ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950.g.a ENSGT00510000048363 ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a ##22 ENSGT00940000153505.a.b.b ENSGT00940000163051 ENSGT00940000154367.a ENSGT00940000163510.D ENSGT00940000153246.a.a.b ENSGT00940000153246.b ENSGT00890000139482 ENSGT00940000158695 ENSGT00390000016307 ENSGT00390000001733 ENSGT00390000002721 ENSGT00940000162270 ENSGT00390000004643 ENSGT00390000004522 ENSGT00950000182907.a.b.b.a.q.a Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00390000013091.p ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000153336.e.a.a.a.a.e ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950.g.a ENSGT00510000048363.h.a ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a ##22 ENSGT00510000048363.g ENSGT00940000153505.a.b.b ENSGT00940000163051 ENSGT00940000154367.a ENSGT00940000163510.D ENSGT00940000153246.b ENSGT00890000139482 ENSGT00940000158695 ENSGT00390000016307 ENSGT00390000001733 ENSGT00390000002721 ENSGT00940000162270 ENSGT00390000004643 ENSGT00390000004522 ENSGT00950000182907.a.b.b.a.q.a Homo/Pan group ANCESTRAL SPECIES 16 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00390000013091.p ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000153336.e.a.a.a.a.e ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950.g.a ENSGT00510000048363.g ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a ##22 ENSGT00940000153505.a.b.b ENSGT00940000163051 ENSGT00940000154367.a ENSGT00940000163510.D ENSGT00940000153246.b ENSGT00890000139482 ENSGT00940000158695 ENSGT00390000016307 ENSGT00390000001733 ENSGT00390000002721 ENSGT00940000162270 ENSGT00390000004643 ENSGT00390000004522 ENSGT00950000182907.a.b.b.a.q.a ENSGT00390000011081 Pan ANCESTRAL SPECIES 18 ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00390000013091.p ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000153336.e.a.a.a.a.e ENSGT00940000160266 ENSGT00940000160237 ENSGT00670000098074 ENSGT00520000055591.b ENSGT00940000155950.g.a ENSGT00510000048363.g ENSGT00940000155950.g.b.c ENSGT00510000048363.h.a ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.a ##22 ENSGT00940000153505.a.b.b ENSGT00940000163051 ENSGT00940000154367.a ENSGT00940000163510.D ENSGT00940000153246.b ENSGT00890000139482 ENSGT00940000158695 ENSGT00390000016307 ENSGT00390000001733 ENSGT00390000002721 ENSGT00940000162270 ENSGT00390000004643 ENSGT00390000004522 ENSGT00950000182907.a.b.b.a.q.a ENSGT00390000011081 Bonobo MODERN SPECIES 22 MFSD14B (ENSPPAG00000025011) FBP2 (ENSPPAG00000034055) FBP1 (ENSPPAG00000042827) AOPEP (ENSPPAG00000028823) FANCC (ENSPPAG00000037232) ENSPPAG00000033158 PTCH1 (ENSPPAG00000042033) ENSPPAG00000035061 ENSPPAG00000042252 HSD17B3 (ENSPPAG00000040278) ENSPPAG00000039175 ZNF367 (ENSPPAG00000035864) HABP4 (ENSPPAG00000031320) ENSPPAG00000039845 ENSPPAG00000038888 ENSPPAG00000033645 ##22 ZNF510 (ENSPPAG00000038934) ZNF782 (ENSPPAG00000040069) CTSV (ENSPPAG00000041013) ENSPPAG00000033776 CCDC180 (ENSPPAG00000009246) TDRD7 (ENSPPAG00000041009) TMOD1 (ENSPPAG00000028497) TSTD2 (ENSPPAG00000028289) NCBP1 (ENSPPAG00000026462) XPA (ENSPPAG00000040453) TRMO (ENSPPAG00000013453) HEMGN (ENSPPAG00000034879) ANP32B (ENSPPAG00000040611) NANS (ENSPPAG00000027418) TRIM14 (ENSPPAG00000030288) Chimpanzee MODERN SPECIES 22 FBP1 (ENSPTRG00000021138) AOPEP (ENSPTRG00000021139) FANCC (ENSPTRG00000021140) ENSPTRG00000039664 ENSPTRG00000049213 PTCH1 (ENSPTRG00000046951) ERCC6L2 (ENSPTRG00000048689) ENSPTRG00000043521 HSD17B3 (ENSPTRG00000021150) SLC35D2 (ENSPTRG00000021151) ZNF367 (ENSPTRG00000021153) ENSPTRG00000046335 HABP4 (ENSPTRG00000021154) CDC14B (ENSPTRG00000021155) PRXL2C (ENSPTRG00000021156) ENSPTRG00000044248 ##22 ZNF510 (ENSPTRG00000023307) ZNF782 (ENSPTRG00000021157) ENSPTRG00000021132 ENSPTRG00000021159 CTSV (ENSPTRG00000002675) ENSPTRG00000029267 ENSPTRG00000049659 CCDC180 (ENSPTRG00000021162) TDRD7 (ENSPTRG00000022912) TMOD1 (ENSPTRG00000021165) TSTD2 (ENSPTRG00000021166) NCBP1 (ENSPTRG00000021167) XPA (ENSPTRG00000021168) FOXE1 (ENSPTRG00000029193) TRMO (ENSPTRG00000021170) Gibbon MODERN SPECIES 10 FBP2 (ENSNLEG00000016721) FBP1 (ENSNLEG00000016727) AOPEP (ENSNLEG00000016734) FANCC (ENSNLEG00000016749) ENSNLEG00000010465 PTCH1 (ENSNLEG00000016755) ENSNLEG00000032943 ENSNLEG00000016784 HSD17B3 (ENSNLEG00000032342) SLC35D2 (ENSNLEG00000016807) ENSNLEG00000016813 ENSNLEG00000029121 HABP4 (ENSNLEG00000016819) CDC14B (ENSNLEG00000016822) PRXL2C (ENSNLEG00000036194) ENSNLEG00000027861 ##22 ZNF510 (ENSNLEG00000016838) ZNF782 (ENSNLEG00000016845) ENSNLEG00000018342 CTSV (ENSNLEG00000016847) ENSNLEG00000029601 ENSNLEG00000016858 CCDC180 (ENSNLEG00000016862) TDRD7 (ENSNLEG00000016885) TMOD1 (ENSNLEG00000016899) TSTD2 (ENSNLEG00000016904) NCBP1 (ENSNLEG00000016909) ENSNLEG00000031602 TRMO (ENSNLEG00000016930) HEMGN (ENSNLEG00000016935) ANP32B (ENSNLEG00000016941) Hominoidea ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.b ##22 Hominidae ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.b ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES 5 ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ENSGT00940000158686 ENSGT00940000163607 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.b ##22 ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000158251 ENSGT00940000162858 ENSGT00940000163725 ENSGT00940000157277 ENSGT00940000156144 ENSGT00530000063745.b ENSGT00390000006546.c ENSGT01050000244900.a.a.a.a.b ENSGT00940000157479 ENSGT00940000153222.a.a ENSGT00950000182959.a.a ENSGT00950000182959.a.b.b.a Homo/Pan group ANCESTRAL SPECIES 6 ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ENSGT00940000158686 ENSGT00940000163607 ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.b ##22 ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000158251 ENSGT00940000162858 ENSGT00940000163725 ENSGT00940000157277 ENSGT00940000156144 ENSGT00530000063745.b ENSGT00390000006546.c ENSGT01050000244900.a.a.a.a.b ENSGT00940000157479 ENSGT00940000153222.a.a ENSGT00950000182959.a.a ENSGT00950000182959.a.b.b.a Pan ANCESTRAL SPECIES 4 ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ENSGT00940000158686 ENSGT00390000016737.b ENSGT00940000160413 ENSGT00940000158342.b ENSGT00390000018272 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00950000183077.a.a.a.a.a.b.b.a.b.a.b ##22 ENSGT00940000155352 ENSGT00640000091574 ENSGT00950000182839.A.c ENSGT00940000158251 ENSGT00940000162858 ENSGT00940000163725 ENSGT00940000157277 ENSGT00940000156144 ENSGT00530000063745.b ENSGT00390000006546.c ENSGT01050000244900.a.a.a.a.b ENSGT00940000157479 ENSGT00940000153222.a.a ENSGT00950000182959.a.a ENSGT00950000182959.a.b.b.a Bonobo MODERN SPECIES 3 DCN (ENSPPAG00000039448) LUM (ENSPPAG00000027479) KERA (ENSPPAG00000042356) EPYC (ENSPPAG00000029056) CCER1 (ENSPPAG00000003461) ENSPPAG00000017362 ATP2B1 (ENSPPAG00000044122) ENSPPAG00000014801 POC1B (ENSPPAG00000030897) DUSP6 (ENSPPAG00000028930) KITLG (ENSPPAG00000031443) TMTC3 (ENSPPAG00000040761) CEP290 (ENSPPAG00000027339) C12orf29 (ENSPPAG00000042620) C12orf50 (ENSPPAG00000035198) ENSPPAG00000043288 ##22 ENSPPAG00000020965 MGAT4C (ENSPPAG00000031798) NTS (ENSPPAG00000032540) RASSF9 (ENSPPAG00000019366) ALX1 (ENSPPAG00000034056) LRRIQ1 (ENSPPAG00000029539) TSPAN19 (ENSPPAG00000042222) SLC6A15 (ENSPPAG00000043054) TMTC2 (ENSPPAG00000043706) METTL25 (ENSPPAG00000028130) CCDC59 (ENSPPAG00000030113) PPFIA2 (ENSPPAG00000033118) ACSS3 (ENSPPAG00000040977) LIN7A (ENSPPAG00000026771) MYF5 (ENSPPAG00000028699) Chimpanzee MODERN SPECIES 3 DCN (ENSPTRG00000005290) LUM (ENSPTRG00000005289) KERA (ENSPTRG00000005288) EPYC (ENSPTRG00000005287) CCER1 (ENSPTRG00000023775) ENSPTRG00000046703 ATP2B1 (ENSPTRG00000005286) ENSPTRG00000046518 POC1B (ENSPTRG00000005284) DUSP6 (ENSPTRG00000005282) KITLG (ENSPTRG00000005281) TMTC3 (ENSPTRG00000005280) CEP290 (ENSPTRG00000005278) C12H12orf29 (ENSPTRG00000005277) C12H12orf50 (ENSPTRG00000005276) ENSPTRG00000044899 ##22 MGAT4C (ENSPTRG00000045901) NTS (ENSPTRG00000005274) RASSF9 (ENSPTRG00000005273) ALX1 (ENSPTRG00000005272) LRRIQ1 (ENSPTRG00000005271) TSPAN19 (ENSPTRG00000040421) SLC6A15 (ENSPTRG00000005269) TMTC2 (ENSPTRG00000005268) METTL25 (ENSPTRG00000005267) CCDC59 (ENSPTRG00000005266) PPFIA2 (ENSPTRG00000005265) ACSS3 (ENSPTRG00000005263) LIN7A (ENSPTRG00000005262) MYF5 (ENSPTRG00000005261) MYF6 (ENSPTRG00000005260) Gorilla MODERN SPECIES 3 DCN (ENSGGOG00000003795) LUM (ENSGGOG00000028361) KERA (ENSGGOG00000009652) EPYC (ENSGGOG00000012816) CCER1 (ENSGGOG00000010742) ATP2B1 (ENSGGOG00000014187) ENSGGOG00000024502 POC1B (ENSGGOG00000008572) DUSP6 (ENSGGOG00000027241) KITLG (ENSGGOG00000021939) ENSGGOG00000024578 TMTC3 (ENSGGOG00000012696) CEP290 (ENSGGOG00000025227) C12orf29 (ENSGGOG00000005986) C12orf50 (ENSGGOG00000000185) ENSGGOG00000025144 ##22 MGAT4C (ENSGGOG00000015293) NTS (ENSGGOG00000010239) RASSF9 (ENSGGOG00000028426) ALX1 (ENSGGOG00000000168) LRRIQ1 (ENSGGOG00000010081) TSPAN19 (ENSGGOG00000022316) SLC6A15 (ENSGGOG00000010440) ENSGGOG00000025311 TMTC2 (ENSGGOG00000028180) METTL25 (ENSGGOG00000023239) CCDC59 (ENSGGOG00000025296) PPFIA2 (ENSGGOG00000026460) ACSS3 (ENSGGOG00000010105) LIN7A (ENSGGOG00000038053) MYF5 (ENSGGOG00000004366) Simiiformes ANCESTRAL SPECIES 9 ENSGT00940000155009.k.b ENSGT00390000015623 ENSGT00940000162492 ENSGT00940000155009.k.a.a ENSGT00940000158618 ENSGT00940000160302 ENSGT00940000159616 ENSGT00510000047417 ENSGT00940000156153 ENSGT00500000044890.a.a ENSGT00940000153737.b ENSGT00390000008856.i ENSGT00940000163590 ENSGT00390000006290 ENSGT00390000001021 ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000155375.c ENSGT00940000154443.b.a ENSGT00940000160782 ENSGT00940000155600.b ENSGT01060000248589.C ENSGT00990000203619.A.a ENSGT00940000164483 ENSGT00940000160514 ENSGT00940000161545 ENSGT00390000004304 ENSGT00530000063528.B ENSGT00940000154517.f ENSGT00940000155616.c.b ENSGT00940000154517.e.b ENSGT00940000163638 Catarrhini ANCESTRAL SPECIES 12 ENSGT00940000155009.k.a.a ENSGT00940000158618 ENSGT00940000160302 ENSGT00940000159616 ENSGT00510000047417 ENSGT00940000156153 ENSGT00500000044890.a.a ENSGT00940000153737.b ENSGT00940000154156.d.m ENSGT00390000008856.i ENSGT00940000163590 ENSGT00390000006290 ENSGT00390000001021 ENSGT00910000147092 ENSGT00940000164052.d ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000154502.g.a.a ENSGT00940000155017.y.a ENSGT00940000155375.c ENSGT00940000154443.b.a ENSGT00390000018039.f ENSGT00940000160782 ENSGT01060000248589.C ENSGT00990000203619.A.a ENSGT00940000155600.b ENSGT00940000164483 ENSGT00940000160514 ENSGT00940000161545 ENSGT00390000004304 ENSGT00940000154468.hb.a ENSGT00530000063528.B Hominoidea ANCESTRAL SPECIES 16 ENSGT00940000158618 ENSGT00940000160302 ENSGT00940000159616 ENSGT00510000047417 ENSGT00940000156153 ENSGT00500000044890.a.a ENSGT00940000153112.D.n.a.a.a.b.c ENSGT00940000153737.b ENSGT00940000154156.d.m.a ENSGT00390000008856.i ENSGT00940000163590 ENSGT00390000006290 ENSGT00390000001021 ENSGT00910000147092 ENSGT00940000164052.d ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000154502.g.a.a ENSGT00940000155017.y.a ENSGT00940000155375.c ENSGT00940000154443.b.a ENSGT00390000018039.f ENSGT00940000160782 ENSGT00940000155600.b ENSGT01060000248589.C ENSGT00990000203619.A.a ENSGT00940000164483 ENSGT00940000160514 ENSGT00940000161545 ENSGT00390000004304 ENSGT00940000154468.hb.a ENSGT00390000013305.a.a.w.b Hominidae ANCESTRAL SPECIES 8 ENSGT00940000158618 ENSGT00940000160302 ENSGT00940000159616 ENSGT00510000047417 ENSGT00940000156153 ENSGT00500000044890.a.a ENSGT00940000153112.D.n.a.a.a.b.c ENSGT00940000153737.b ENSGT00940000154156.d.m.a ENSGT00390000008856.i ENSGT00940000163590 ENSGT00390000006290 ENSGT00390000001021 ENSGT00910000147092 ENSGT00940000164052.d ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000154502.g.a.a ENSGT00940000155375.c ENSGT00940000154443.b.a ENSGT00940000160782 ENSGT00390000018039.f ENSGT00940000155600.b ENSGT01060000248589.C ENSGT00990000203619.A.a ENSGT00940000164483 ENSGT00940000160514 ENSGT00940000161545 ENSGT00390000004304 ENSGT00940000154468.hb.a ENSGT00530000063528.B ENSGT00940000154517.f Homo/Pan/Gorilla group ANCESTRAL SPECIES 53 ENSGT00910000147092 ENSGT00940000164052.d ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000154502.g.a.a Homo/Pan group ANCESTRAL SPECIES 55 ENSGT00910000147092 ENSGT00940000164052.d ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000154502.g.a.a Pan ANCESTRAL SPECIES 6 ENSGT00940000158618 ENSGT00940000160302 ENSGT00940000159616 ENSGT00510000047417 ENSGT00940000156153 ENSGT00500000044890.a.a ENSGT00940000153112.D.n.a.a.a.b.c ENSGT00940000153737.b ENSGT00940000154156.d.m.a ENSGT00390000008856.i ENSGT00940000163590 ENSGT00390000006290 ENSGT00390000001021 ENSGT00910000147092 ENSGT00940000164052.d ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000154502.g.a.a ENSGT00940000153095.g.b.a.a.a.b.b.a.a.b.a ENSGT00940000155017.z.b.a ENSGT00940000155375.c ENSGT00910000146883.C ENSGT00940000154443.b.a ENSGT00940000160782 ENSGT00390000018039.f ENSGT00940000155600.b ENSGT00990000203619.A.a ENSGT00940000164483 ENSGT00940000154156.d.m.b ENSGT00670000098076.i.b ENSGT00940000160514 ENSGT00940000161545 Chimpanzee MODERN SPECIES 972 SYTL5 (ENSPTRG00000021795) SRPX (ENSPTRG00000021796) ENSPTRG00000052456 OTC (ENSPTRG00000021799) TSPAN7 (ENSPTRG00000021800) MID1IP1 (ENSPTRG00000047112) ENSPTRG00000039246 BCOR (ENSPTRG00000021802) ENSPTRG00000052101 ATP6AP2 (ENSPTRG00000021803) MPC1L (ENSPTRG00000048113) CXHXorf38 (ENSPTRG00000021804) MED14 (ENSPTRG00000021805) ENSPTRG00000045194 ENSPTRG00000040752 ENSPTRG00000044764 ##22 ENSPTRG00000044980 ENSPTRG00000042923 ENSPTRG00000045378 USP9X (ENSPTRG00000045541) ENSPTRG00000042802 DDX3X (ENSPTRG00000049651) NYX (ENSPTRG00000021811) CASK (ENSPTRG00000021812) GPR82 (ENSPTRG00000021814) ENSPTRG00000047656 PPP1R2C (ENSPTRG00000043024) ENSPTRG00000052003 ENSPTRG00000045828 MAOA (ENSPTRG00000021816) MAOB (ENSPTRG00000021817) Bonobo MODERN SPECIES 369 H2AP (ENSPPAG00000001985) SYTL5 (ENSPPAG00000042432) SRPX (ENSPPAG00000036711) ENSPPAG00000009040 OTC (ENSPPAG00000030732) TSPAN7 (ENSPPAG00000011857) MID1IP1 (ENSPPAG00000010366) ENSPPAG00000030291 BCOR (ENSPPAG00000027608) ENSPPAG00000009962 ATP6AP2 (ENSPPAG00000039969) MPC1L (ENSPPAG00000019631) CXorf38 (ENSPPAG00000044103) MED14 (ENSPPAG00000044133) ENSPPAG00000040577 ENSPPAG00000041897 ##22 ENSPPAG00000028929 ENSPPAG00000042937 USP9X (ENSPPAG00000039671) ENSPPAG00000037641 DDX3X (ENSPPAG00000041809) ENSPPAG00000028671 ENSPPAG00000032293 CASK (ENSPPAG00000039799) GPR82 (ENSPPAG00000032725) PPP1R2C (ENSPPAG00000026223) ENSPPAG00000043152 ENSPPAG00000036386 MAOA (ENSPPAG00000033045) MAOB (ENSPPAG00000033577) NDP (ENSPPAG00000028724) Gorilla MODERN SPECIES 523 SYTL5 (ENSGGOG00000002396) SRPX (ENSGGOG00000007123) RPGR (ENSGGOG00000023793) OTC (ENSGGOG00000011703) TSPAN7 (ENSGGOG00000013841) ENSGGOG00000028188 ENSGGOG00000039451 ENSGGOG00000042064 BCOR (ENSGGOG00000014889) IMPDH (ENSGGOG00000040015) ATP6AP2 (ENSGGOG00000000532) CXorf38 (ENSGGOG00000013906) MED14 (ENSGGOG00000004125) ENSGGOG00000042324 ENSGGOG00000043097 ENSGGOG00000024940 ##22 ENSGGOG00000037299 ENSGGOG00000024562 USP9X (ENSGGOG00000004363) ENSGGOG00000039583 ENSGGOG00000043505 ENSGGOG00000043590 DDX3X (ENSGGOG00000003181) NYX (ENSGGOG00000008559) ENSGGOG00000025251 CASK (ENSGGOG00000007796) ENSGGOG00000040501 ENSGGOG00000039857 GPR82 (ENSGGOG00000003785) ENSGGOG00000042444 PPP1R2C (ENSGGOG00000038310) Orangutan MODERN SPECIES 242 CYBB (ENSPPYG00000020240) DYNLT3 (ENSPPYG00000020241) SYTL5 (ENSPPYG00000020243) SRPX (ENSPPYG00000020244) ENSPPYG00000020245 OTC (ENSPPYG00000020246) TSPAN7 (ENSPPYG00000020247) ENSPPYG00000038144 ENSPPYG00000035758 BCOR (ENSPPYG00000020250) ENSPPYG00000031470 ATP6AP2 (ENSPPYG00000020251) MPC1L (ENSPPYG00000020252) CXorf38 (ENSPPYG00000020253) MED14 (ENSPPYG00000020254) ENSPPYG00000020255 ##22 USP9X (ENSPPYG00000020256) DDX3X (ENSPPYG00000020257) NYX (ENSPPYG00000020258) CASK (ENSPPYG00000020259) GPR34 (ENSPPYG00000020260) GPR82 (ENSPPYG00000020261) PPP1R2C (ENSPPYG00000020262) MAOA (ENSPPYG00000020263) MAOB (ENSPPYG00000020264) NDP (ENSPPYG00000039194) EFHC2 (ENSPPYG00000020266) ENSPPYG00000020267 FUNDC1 (ENSPPYG00000020268) DUSP21 (ENSPPYG00000020269) KDM6A (ENSPPYG00000020270) Gibbon MODERN SPECIES 449 SYTL5 (ENSNLEG00000001002) SRPX (ENSNLEG00000001074) ENSNLEG00000001110 OTC (ENSNLEG00000001180) TSPAN7 (ENSNLEG00000032727) MID1IP1 (ENSNLEG00000034964) ENSNLEG00000033266 BCOR (ENSNLEG00000001372) ENSNLEG00000001433 ATP6AP2 (ENSNLEG00000001441) MPC1L (ENSNLEG00000019041) CXorf38 (ENSNLEG00000001550) MED14 (ENSNLEG00000001575) ENSNLEG00000030923 ENSNLEG00000028978 ENSNLEG00000030171 ##22 ENSNLEG00000030859 ENSNLEG00000032912 USP9X (ENSNLEG00000001837) DDX3X (ENSNLEG00000001876) ENSNLEG00000001923 NYX (ENSNLEG00000001945) GPR82 (ENSNLEG00000002258) CASK (ENSNLEG00000001954) ENSNLEG00000028592 ENSNLEG00000027452 MAOA (ENSNLEG00000002271) MAOB (ENSNLEG00000002389) ENSNLEG00000036149 ENSNLEG00000036235 ENSNLEG00000031843 Cercopithecidae ANCESTRAL SPECIES 27 ENSGT00940000155009.k.a.a ENSGT00940000158618 ENSGT00940000160302 ENSGT00940000159616 ENSGT00510000047417 ENSGT00940000156153 ENSGT00500000044890.a.a ENSGT00940000153737.b ENSGT00940000154156.d.m ENSGT00390000008856.i ENSGT00940000163590 ENSGT00390000006290 ENSGT00390000001021 ENSGT00910000147092 ENSGT00940000164052.d ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000154502.g.a.a ENSGT00940000155017.y.a ENSGT00940000155375.c ENSGT00530000064570.d ENSGT00940000154443.b.a ENSGT00390000018039.f ENSGT00940000160782 ENSGT01060000248589.C ENSGT00990000203619.A.a ENSGT00940000155600.b ENSGT00940000164483 ENSGT00670000098076.i.b ENSGT00940000160514 ENSGT00940000161545 ENSGT00390000004304 Cercopithecinae ANCESTRAL SPECIES 13 ENSGT00940000155009.k.a.a ENSGT00940000158618 ENSGT00940000160302 ENSGT00940000159616 ENSGT00510000047417 ENSGT00940000156153 ENSGT00500000044890.a.a ENSGT00940000153737.b ENSGT00940000154156.d.m ENSGT00390000008856.i ENSGT00940000163590 ENSGT00390000006290 ENSGT00390000001021 ENSGT00910000147092 ENSGT00940000164052.d ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000154502.g.a.a ENSGT00940000155017.y.a ENSGT00940000155375.c ENSGT00530000064570.d ENSGT00940000154443.b.a ENSGT00390000018039.f ENSGT00940000160782 ENSGT01060000248589.C ENSGT00990000203619.A.a ENSGT00940000155600.b ENSGT00940000164483 ENSGT00670000098076.i.b ENSGT00940000160514 ENSGT00940000161545 ENSGT00390000004304 Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00940000155009.k.a.a ENSGT00940000158618 ENSGT00940000160302 ENSGT00940000159616 ENSGT00510000047417 ENSGT00940000156153 ENSGT00500000044890.a.a ENSGT00940000153737.b ENSGT00940000154156.d.m ENSGT00390000008856.i ENSGT00940000163590 ENSGT00390000006290 ENSGT00390000001021 ENSGT00910000147092 ENSGT00940000164052.d ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000154502.g.a.a ENSGT00940000155017.y.a ENSGT00940000155375.c ENSGT00530000064570.d ENSGT00940000154443.b.a ENSGT00390000018039.f ENSGT00940000160782 ENSGT00940000155600.b ENSGT01060000248589.C ENSGT00990000203619.A.a ENSGT00940000164483 ENSGT00940000157455.i.a.b ENSGT00390000013593.h ENSGT00940000157062.l ENSGT00670000098076.i.b Macaca ANCESTRAL SPECIES 13 ENSGT00940000155009.k.a.a ENSGT00940000158618 ENSGT00940000160302 ENSGT00940000159616 ENSGT00510000047417 ENSGT00940000156153 ENSGT00910000146737 ENSGT00940000153737.b ENSGT00940000154156.d.m ENSGT00390000008856.i ENSGT00940000163590 ENSGT00390000006290 ENSGT00390000001021 ENSGT00910000147092 ENSGT00940000164052.d ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000154502.g.a.a ENSGT00940000155017.y.a ENSGT00940000155375.c ENSGT00530000064570.d ENSGT00940000154443.b.a ENSGT00940000160782 ENSGT00390000018039.f ENSGT00940000155600.b ENSGT01060000248589.C ENSGT00990000203619.A.a ENSGT00940000164483 ENSGT00940000157455.i.a.b ENSGT00390000013593.h ENSGT00940000157062.l ENSGT00670000098076.i.b Macaca_a ANCESTRAL SPECIES 11 ENSGT00940000155009.k.a.a ENSGT00940000158618 ENSGT00940000160302 ENSGT00940000159616 ENSGT00510000047417 ENSGT00500000044890.a.a ENSGT00940000156153 ENSGT00910000146737 ENSGT00940000153737.b ENSGT00940000154156.d.m ENSGT01030000240144 ENSGT00390000008856.i ENSGT00940000163590 ENSGT00390000006290 ENSGT00390000001021 ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000155375.c ENSGT00940000161627.b.a.b.b.a.a.a.b.a ENSGT00940000154443.b.a ENSGT00940000160782 ENSGT00940000155600.b ENSGT01060000248589.C ENSGT00990000203619.A.a ENSGT00940000164483 ENSGT00670000098076.i.b ENSGT00940000160514 ENSGT00940000161545 ENSGT00390000004304 ENSGT00940000154468.hb.a ENSGT00530000063528.B ENSGT00390000013305.a.a.w.b Crab-eating macaque MODERN SPECIES 175 SYTL5 (ENSMFAG00000031961) SRPX (ENSMFAG00000032104) ENSMFAG00000024781 OTC (ENSMFAG00000040619) ENSMFAG00000051264 TSPAN7 (ENSMFAG00000002802) ENSMFAG00000049434 ENSMFAG00000059834 ENSMFAG00000056528 ENSMFAG00000019253 BCOR (ENSMFAG00000042404) ENSMFAG00000003022 ENSMFAG00000055028 ATP6AP2 (ENSMFAG00000038545) MED14 (ENSMFAG00000000690) ENSMFAG00000016940 ##22 USP9X (ENSMFAG00000025475) ENSMFAG00000061620 DDX3X (ENSMFAG00000034876) ENSMFAG00000035536 GPR34 (ENSMFAG00000031644) GPR82 (ENSMFAG00000023715) ENSMFAG00000058195 PPP1R2C (ENSMFAG00000064193) ENSMFAG00000056067 ENSMFAG00000030357 MAOA (ENSMFAG00000041722) MAOB (ENSMFAG00000040990) NDP (ENSMFAG00000000487) ENSMFAG00000059305 EFHC2 (ENSMFAG00000032590) Pig-tailed macaque MODERN SPECIES 84 OTC (ENSMNEG00000013646) TSPAN7 (ENSMNEG00000019779) ENSMNEG00000038527 BCOR (ENSMNEG00000026958) ENSMNEG00000031193 ATP6AP2 (ENSMNEG00000006275) MPC1L (ENSMNEG00000039097) CXorf38 (ENSMNEG00000028665) MED14 (ENSMNEG00000030935) ENSMNEG00000037768 ENSMNEG00000031988 ENSMNEG00000039282 ##22 ENSMNEG00000040368 ENSMNEG00000034064 USP9X (ENSMNEG00000035247) ENSMNEG00000014066 DDX3X (ENSMNEG00000031741) ENSMNEG00000021429 NYX (ENSMNEG00000007266) ENSMNEG00000033837 CASK (ENSMNEG00000038268) GPR82 (ENSMNEG00000003045) ENSMNEG00000018791 ENSMNEG00000030204 ENSMNEG00000019392 ENSMNEG00000041685 MAOA (ENSMNEG00000021428) Cercopithecinae_b ANCESTRAL SPECIES 35 ENSGT00940000155009.k.b ENSGT00390000015623 ENSGT00940000158618 ENSGT00940000160302 ENSGT00510000047417 ENSGT00940000156153 ENSGT00500000044890.a.a ENSGT00940000153737.b ENSGT00940000154156.d.m ENSGT00390000008856.i ENSGT00940000163590 ENSGT00390000006290 ENSGT00390000001021 ENSGT00910000147092 ENSGT00940000164052.d ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000154502.g.a.a ENSGT00940000155017.y.a ENSGT00940000155375.c ENSGT00530000064570.d ENSGT00940000154443.b.a ENSGT00940000160782 ENSGT01060000248589.C ENSGT00390000018039.f ENSGT00940000155600.b ENSGT00990000203619.A.a ENSGT00940000157455.i.a.b ENSGT00390000013593.h ENSGT00940000157062.l ENSGT00670000098076.i.b Cercopithecinae_d ANCESTRAL SPECIES 164 ENSGT00510000047417 ENSGT00940000156153 ENSGT00500000044890.a.a ENSGT00940000153737.b ENSGT00940000154156.d.m ENSGT00390000008856.i ENSGT00940000163590 ENSGT00390000006290 ENSGT00390000001021 ENSGT00910000147092 ENSGT00940000164052.d ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000154502.g.a.a ENSGT00940000155017.y.a ENSGT00940000155375.c ENSGT00530000064570.d ENSGT00940000154443.b.a ENSGT00940000160782 ENSGT00390000018039.f ENSGT00940000155600.b ENSGT00990000203619.A.a ENSGT00940000157455.i.a.b ENSGT00390000013593.h ENSGT00940000157062.l ENSGT00670000098076.i.b Sooty mangabey MODERN SPECIES 233 OTC (ENSCATG00000040927) TSPAN7 (ENSCATG00000040622) MID1IP1 (ENSCATG00000019429) BCOR (ENSCATG00000035858) ENSCATG00000034650 ATP6AP2 (ENSCATG00000033182) MPC1L (ENSCATG00000040875) CXorf38 (ENSCATG00000005533) MED14 (ENSCATG00000015139) ENSCATG00000039475 ENSCATG00000035935 ##22 ENSCATG00000002218 ENSCATG00000013830 USP9X (ENSCATG00000045108) ENSCATG00000020614 DDX3X (ENSCATG00000010148) NYX (ENSCATG00000038924) ENSCATG00000029958 CASK (ENSCATG00000043780) GPR82 (ENSCATG00000019769) ENSCATG00000040782 ENSCATG00000009201 ENSCATG00000020797 ENSCATG00000037421 Drill MODERN SPECIES 781 OTC (ENSMLEG00000000589) TSPAN7 (ENSMLEG00000041757) ENSMLEG00000024060 BCOR (ENSMLEG00000027853) ENSMLEG00000043129 ATP6AP2 (ENSMLEG00000029677) MPC1L (ENSMLEG00000033791) CXorf38 (ENSMLEG00000029318) MED14 (ENSMLEG00000037310) ENSMLEG00000030436 ENSMLEG00000035769 ENSMLEG00000041667 ##22 ENSMLEG00000041765 ENSMLEG00000011061 USP9X (ENSMLEG00000029360) ENSMLEG00000003594 DDX3X (ENSMLEG00000044178) NYX (ENSMLEG00000043211) ENSMLEG00000029956 CASK (ENSMLEG00000030546) GPR82 (ENSMLEG00000026691) ENSMLEG00000040190 ENSMLEG00000032902 ENSMLEG00000004115 ENSMLEG00000024931 Olive baboon MODERN SPECIES 792 ENSPANG00000010726 H2AP (ENSPANG00000047171) SYTL5 (ENSPANG00000006759) SRPX (ENSPANG00000011869) ENSPANG00000050468 OTC (ENSPANG00000013609) TSPAN7 (ENSPANG00000001627) MID1IP1 (ENSPANG00000010851) ENSPANG00000049183 BCOR (ENSPANG00000023328) ENSPANG00000003221 ATP6AP2 (ENSPANG00000009876) CXorf38 (ENSPANG00000009515) MED14 (ENSPANG00000024675) ENSPANG00000043492 ENSPANG00000010629 ##22 ENSPANG00000040156 ENSPANG00000049298 USP9X (ENSPANG00000009041) ENSPANG00000050425 ENSPANG00000050530 DDX3X (ENSPANG00000023917) ENSPANG00000011805 NYX (ENSPANG00000009956) GPR34 (ENSPANG00000015410) GPR82 (ENSPANG00000010850) CASK (ENSPANG00000008102) PPP1R2C (ENSPANG00000049960) ENSPANG00000037030 ENSPANG00000008948 ENSPANG00000032233 Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES 527 ENSGT00940000153737.b ENSGT00940000154156.d.m ENSGT00390000008856.i ENSGT00390000006290 ENSGT00390000001021 ENSGT00940000164052.d ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b.a ##22 ENSGT00940000154502.g.a.a ENSGT00940000155017.y.a Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 2262 ENSRBIG00000037290 ##22 Black snub-nosed monkey MODERN SPECIES 651 ENSRBIG00000022951 ENSRBIG00000032784 ATG4A (ENSRBIG00000037493) ENSRBIG00000007326 PTPN12 (ENSRBIG00000032459) ENSRBIG00000006205 RSBN1L (ENSRBIG00000040399) TMEM60 (ENSRBIG00000004732) PHTF2 (ENSRBIG00000041715) MAGI2 (ENSRBIG00000022243) ENSRBIG00000020561 ENSRBIG00000041960 ##22 ENSRBIG00000021799 GNAI1 (ENSRBIG00000031401) GNAT3 (ENSRBIG00000029649) CD36 (ENSRBIG00000028862) SEMA3C (ENSRBIG00000038000) Golden snub-nosed monkey MODERN SPECIES 1062 BCOR (ENSRROG00000036755) ENSRROG00000035146 ATP6AP2 (ENSRROG00000033213) CXorf38 (ENSRROG00000035207) MED14 (ENSRROG00000039257) ENSRROG00000040312 ENSRROG00000035359 ENSRROG00000032361 ##22 ENSRROG00000041193 ENSRROG00000033360 ENSRROG00000000074 ENSRROG00000040975 Rhinopithecus ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b.b ##22 Golden snub-nosed monkey MODERN SPECIES 1634 ENSRROG00000005820 ENSRROG00000020108 ENSRROG00000039237 ##22 Platyrrhini ANCESTRAL SPECIES 28 ENSGT00390000003231.b ENSGT00940000160244 ENSGT00940000155009.k.a.a ENSGT00940000158618 ENSGT00940000162492 ENSGT00940000160302 ENSGT00940000159616 ENSGT00510000047417 ENSGT00940000156153 ENSGT00500000044890.a.a ENSGT00940000153737.b ENSGT00390000008856.i ENSGT00940000163590 ENSGT00390000006290 ENSGT00390000001021 ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000155375.c ENSGT00440000034918.q.a.a.b.b.b ENSGT00940000154443.b.a ENSGT00940000160782 ENSGT00940000155600.b ENSGT01060000248589.C ENSGT00670000098076.i.b ENSGT00940000160514 ENSGT00940000161545 ENSGT00390000004304 ENSGT00940000166930 ENSGT00530000063528.B ENSGT00940000154517.e.b ENSGT00940000155202.i.b ENSGT00520000055625.a Cebidae ANCESTRAL SPECIES 18 ENSGT00390000003231.b ENSGT00940000160244 ENSGT00940000155009.k.a.a ENSGT00940000158618 ENSGT00940000162492 ENSGT00940000160302 ENSGT00940000159616 ENSGT00510000047417 ENSGT00940000156153 ENSGT00500000044890.a.a ENSGT00940000153737.b ENSGT00390000008856.i ENSGT00940000163590 ENSGT00390000006290 ENSGT00390000001021 ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000155375.c ENSGT00440000034918.q.a.a.b.b.b ENSGT00940000154443.b.a ENSGT00940000160782 ENSGT00940000155600.b ENSGT01060000248589.C ENSGT00940000160514 ENSGT00940000161545 ENSGT00390000004304 ENSGT00940000166930 ENSGT00530000063528.B ENSGT00940000154517.e.b ENSGT00940000155202.i.b ENSGT00520000055625.a ENSGT01050000247973 Cebidae_a ANCESTRAL SPECIES 36 ENSGT00940000158538 ENSGT00530000063186.a ENSGT00390000003231.b ENSGT00940000160244 ENSGT00940000155009.k.a.a ENSGT00940000158618 ENSGT00940000160302 ENSGT00940000159616 ENSGT00510000047417 ENSGT00940000156153 ENSGT00500000044890.a.a ENSGT00940000153737.b ENSGT00390000008856.i ENSGT00390000006290 ENSGT00390000001021 ENSGT00950000183077.a.a.a.a.a.b.b.a.b.b ##22 ENSGT00940000155375.c ENSGT00440000034918.q.a.a.b.b.b ENSGT00940000154443.b.a ENSGT00940000160782 ENSGT00940000155600.b ENSGT01060000248589.C Capuchin MODERN SPECIES 611 ATP6AP2 (ENSCCAG00000023476) CXorf38 (ENSCCAG00000026604) MED14 (ENSCCAG00000028557) ENSCCAG00000009054 ##22 ENSCCAG00000013484 ENSCCAG00000027958 DDX3X (ENSCCAG00000023934) NYX (ENSCCAG00000036995) CASK (ENSCCAG00000033169) Bolivian squirrel monkey MODERN SPECIES 51 LANCL3 (ENSSBOG00000020149) XK (ENSSBOG00000028983) CYBB (ENSSBOG00000026782) ENSSBOG00000021839 SYTL5 (ENSSBOG00000021200) SRPX (ENSSBOG00000027895) RPGR (ENSSBOG00000022649) OTC (ENSSBOG00000029990) TSPAN7 (ENSSBOG00000020077) ENSSBOG00000034245 MID1IP1 (ENSSBOG00000010248) BCOR (ENSSBOG00000016929) ATP6AP2 (ENSSBOG00000032565) ENSSBOG00000034566 MED14 (ENSSBOG00000035627) ENSSBOG00000027711 ##22 USP9X (ENSSBOG00000031035) ENSSBOG00000026638 ENSSBOG00000026314 ENSSBOG00000034438 ENSSBOG00000024292 ENSSBOG00000019095 NYX (ENSSBOG00000003432) GPR34 (ENSSBOG00000018759) CASK (ENSSBOG00000024108) ENSSBOG00000004894 ENSSBOG00000016740 ENSSBOG00000027708 ATOH1 (ENSSBOG00000019286) ENSSBOG00000025440 GRID2 (ENSSBOG00000035561) Eutheria DUPLICATION Eutheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Atlantogenata ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Xenarthra ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Armadillo MODERN SPECIES 2027 WDR38 (ENSDNOG00000046480) OLFML2A (ENSDNOG00000040474) ENSDNOG00000033680 NR6A1 (ENSDNOG00000017832) ENSDNOG00000032252 NR5A1 (ENSDNOG00000040922) ADGRD2 (ENSDNOG00000015410) PSMB7 (ENSDNOG00000015332) NEK6 (ENSDNOG00000015320) LHX2 (ENSDNOG00000000465) ENSDNOG00000045998 DENND1A (ENSDNOG00000034926) CRB2 (ENSDNOG00000038587) STRBP (ENSDNOG00000043330) RABGAP1 (ENSDNOG00000013366) ENSDNOG00000037259 ##22 ZBTB26 (ENSDNOG00000045813) ZBTB6 (ENSDNOG00000014591) RC3H2 (ENSDNOG00000014557) ENSDNOG00000043976 PDCL (ENSDNOG00000044206) ENSDNOG00000003471 Boreoeutheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Glires ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Rodentia ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Rodentia_B ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Myomorpha ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Muroidea ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Murinae ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Rat MODERN SPECIES 19 Smap1 (ENSRNOG00000049127) AABR07068694.1 (ENSRNOG00000032822) B3gat2 (ENSRNOG00000046852) Ogfrl1 (ENSRNOG00000014142) ENSRNOG00000066935 RGD1309049 (ENSRNOG00000014123) ENSRNOG00000068665 Rims1 (ENSRNOG00000011000) Kcnq5 (ENSRNOG00000013781) AABR07067042.3 (ENSRNOG00000052878) Khdc1 (ENSRNOG00000028595) Gsta6 (ENSRNOG00000033402) Tmem14a (ENSRNOG00000046593) #21 Rpl10a-ps1 (ENSRNOG00000063674) Gsta1 (ENSRNOG00000013484) ENSRNOG00000064063 ##22 Gsta3 (ENSRNOG00000056847) Tmem14a (ENSRNOG00000013238) #21 RGD1562107 (ENSRNOG00000024755) Tram2 (ENSRNOG00000013046) Efhc1 (ENSRNOG00000042729) Paqr8 (ENSRNOG00000067120) Mcm3 (ENSRNOG00000012543) Il17f (ENSRNOG00000012509) Il17a (ENSRNOG00000012467) Pkhd1 (ENSRNOG00000058742) Tfap2b (ENSRNOG00000011823) Tfap2d (ENSRNOG00000011642) ENSRNOG00000064433 ENSRNOG00000069864 Defb16 (ENSRNOG00000066154) Primates ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Simiiformes ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Cebidae ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.a ##22 Bolivian squirrel monkey MODERN SPECIES 129 ENSSBOG00000023247 ENSSBOG00000024770 MAGEE1 (ENSSBOG00000028745) PBDC1 (ENSSBOG00000021392) MAGEE2 (ENSSBOG00000011456) ZDHHC15 (ENSSBOG00000019635) UPRT (ENSSBOG00000023779) ABCB7 (ENSSBOG00000025210) NEXMIF (ENSSBOG00000013850) RLIM (ENSSBOG00000023523) ENSSBOG00000030121 SLC16A2 (ENSSBOG00000022354) ENSSBOG00000000401 ENSSBOG00000025267 ZCCHC13 (ENSSBOG00000029912) ENSSBOG00000031385 ##22 ENSSBOG00000034044 ENSSBOG00000028302 ENSSBOG00000036400 CHIC1 (ENSSBOG00000031437) ENSSBOG00000003505 CDX4 (ENSSBOG00000020370) Eutheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.b ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.b ##22 Primates ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.b ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.b ##22 Simiiformes ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.b ##22 Platyrrhini ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.b ##22 Cebidae ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.b ##22 Cebidae_a ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.b ##22 Bolivian squirrel monkey MODERN SPECIES 77 MGAM (ENSSBOG00000030990) CLEC5A (ENSSBOG00000026187) ENSSBOG00000008809 PRSS37 (ENSSBOG00000009697) ENSSBOG00000029766 WEE2 (ENSSBOG00000027383) DENND11 (ENSSBOG00000034522) ENSSBOG00000031574 AGK (ENSSBOG00000019979) TMEM178B (ENSSBOG00000022271) ENSSBOG00000022573 BRAF (ENSSBOG00000028284) ENSSBOG00000031343 ADCK2 (ENSSBOG00000005779) DENND2A (ENSSBOG00000027489) ENSSBOG00000023992 ##22 RAB19 (ENSSBOG00000027926) ENSSBOG00000034695 KDM7A (ENSSBOG00000028446) PARP12 (ENSSBOG00000035883) TBXAS1 (ENSSBOG00000022792) HIPK2 (ENSSBOG00000027682) CLEC2L (ENSSBOG00000036019) KLRG2 (ENSSBOG00000030495) LUC7L2 (ENSSBOG00000035525) FMC1 (ENSSBOG00000029874) UBN2 (ENSSBOG00000023676) TTC26 (ENSSBOG00000021624) ZC3HAV1 (ENSSBOG00000027573) ZC3HAV1L (ENSSBOG00000019747) KIAA1549 (ENSSBOG00000020678) Catarrhini ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.b ##22 Hominoidea ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.b ##22 Hominidae ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.b ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.a.b.b.b.b ##22 Gorilla MODERN SPECIES 20 PRSS37 (ENSGGOG00000010592) TAS2R5 (ENSGGOG00000009622) TAS2R4 (ENSGGOG00000023731) TAS2R3 (ENSGGOG00000009618) SSBP1 (ENSGGOG00000009615) WEE2 (ENSGGOG00000009609) DENND11 (ENSGGOG00000008828) ENSGGOG00000037770 AGK (ENSGGOG00000008821) TMEM178B (ENSGGOG00000025163) MRPS33 (ENSGGOG00000009563) BRAF (ENSGGOG00000017089) ENSGGOG00000024622 ADCK2 (ENSGGOG00000012327) DENND2A (ENSGGOG00000011405) ENSGGOG00000023977 ##22 RAB19 (ENSGGOG00000000615) SLC37A3 (ENSGGOG00000011497) KDM7A (ENSGGOG00000003842) PARP12 (ENSGGOG00000000828) TBXAS1 (ENSGGOG00000000826) HIPK2 (ENSGGOG00000004050) ENSGGOG00000040782 CLEC2L (ENSGGOG00000027919) LUC7L2 (ENSGGOG00000016606) UBN2 (ENSGGOG00000004517) TTC26 (ENSGGOG00000005695) ZC3HAV1 (ENSGGOG00000000653) ZC3HAV1L (ENSGGOG00000017143) KIAA1549 (ENSGGOG00000007200) ENSGGOG00000039805 Eutheria ANCESTRAL SPECIES 1 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Atlantogenata ANCESTRAL SPECIES 60 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Afrotheria ANCESTRAL SPECIES 81 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Tenrec MODERN SPECIES 2927 ENSETEG00000007348 ##22 Afrotheria_a ANCESTRAL SPECIES 82 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a ENSGT00390000014153 Elephant MODERN SPECIES 578 CLEC5A (ENSLAFG00000018406) OR9A4 (ENSLAFG00000021730) PRSS37 (ENSLAFG00000011538) TAS2R4 (ENSLAFG00000016501) TAS2R3 (ENSLAFG00000011535) SSBP1 (ENSLAFG00000011526) WEE2 (ENSLAFG00000011523) DENND11 (ENSLAFG00000011516) AGK (ENSLAFG00000002479) ENSLAFG00000026888 MRPS33 (ENSLAFG00000002433) BRAF (ENSLAFG00000016753) NDUFB2 (ENSLAFG00000009098) ADCK2 (ENSLAFG00000021772) DENND2A (ENSLAFG00000013759) MKRN1 (ENSLAFG00000018408) ##22 RAB19 (ENSLAFG00000006237) SLC37A3 (ENSLAFG00000018405) KDM7A (ENSLAFG00000005723) PARP12 (ENSLAFG00000005717) TBXAS1 (ENSLAFG00000005713) HIPK2 (ENSLAFG00000006963) CLEC2L (ENSLAFG00000030972) LUC7L2 (ENSLAFG00000013986) FMC1 (ENSLAFG00000014926) UBN2 (ENSLAFG00000013980) TTC26 (ENSLAFG00000013968) ZC3HAV1 (ENSLAFG00000013954) ZC3HAV1L (ENSLAFG00000013947) ENSLAFG00000030486 ENSLAFG00000013648 Hyrax MODERN SPECIES 2382 MKRN1 (ENSPCAG00000014683) ##22 Xenarthra ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Armadillo DUPLICATION Armadillo MODERN SPECIES 4610 ENSDNOG00000040952 ##22 ASL (ENSDNOG00000025939) CRCP (ENSDNOG00000002751) ENSDNOG00000013000 TPST1 (ENSDNOG00000040167) Armadillo MODERN SPECIES 906 SUPT7L (ENSDNOG00000001274) ENSDNOG00000005570 ENSDNOG00000015881 RBKS (ENSDNOG00000006838) BABAM2 (ENSDNOG00000008062) PLB1 (ENSDNOG00000011347) PPP1CB (ENSDNOG00000043896) SPDYA (ENSDNOG00000023902) WDR43 (ENSDNOG00000018841) ENSDNOG00000041982 ##22 ENSDNOG00000037560 LOXL2 (ENSDNOG00000007180) R3HCC1 (ENSDNOG00000007168) CHMP7 (ENSDNOG00000042658) ENSDNOG00000008700 YPEL5 (ENSDNOG00000002947) ENSDNOG00000035412 ENSDNOG00000039082 ENSDNOG00000042969 ENSDNOG00000032664 ALK (ENSDNOG00000007522) CLIP4 (ENSDNOG00000003424) PCARE (ENSDNOG00000034179) TOGARAM2 (ENSDNOG00000003413) Boreoeutheria ANCESTRAL SPECIES 13 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Laurasiatheria ANCESTRAL SPECIES 21 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Common shrew MODERN SPECIES 2252 ENSSARG00000013697 MKRN1 (ENSSARG00000013683) ##22 Laurasiatheria_a ANCESTRAL SPECIES 14 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Laurasiatheria_b ANCESTRAL SPECIES 14 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Carnivora ANCESTRAL SPECIES 15 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Felidae ANCESTRAL SPECIES 13 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00390000017491.t.u.k ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Panthera ANCESTRAL SPECIES 1 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00390000017491.t.u.k ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Panthera_a ANCESTRAL SPECIES ENSGT00940000163413.d ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00390000017491.t.u.k ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a lion MODERN SPECIES 2 PRSS37 (ENSPLOG00000007202) TAS2R4 (ENSPLOG00000007183) TAS2R3 (ENSPLOG00000007169) SSBP1 (ENSPLOG00000007153) WEE2 (ENSPLOG00000007110) DENND11 (ENSPLOG00000007062) AGK (ENSPLOG00000006870) TMEM178B (ENSPLOG00000006748) MRPS33 (ENSPLOG00000006727) ENSPLOG00000006711 BRAF (ENSPLOG00000006659) NDUFB2 (ENSPLOG00000006615) ADCK2 (ENSPLOG00000006564) DENND2A (ENSPLOG00000006462) RAB19 (ENSPLOG00000006421) MKRN1 (ENSPLOG00000006377) ##22 SLC37A3 (ENSPLOG00000006322) KDM7A (ENSPLOG00000006272) PARP12 (ENSPLOG00000006216) TBXAS1 (ENSPLOG00000006075) HIPK2 (ENSPLOG00000005954) CLEC2L (ENSPLOG00000005917) KLRG2 (ENSPLOG00000005889) LUC7L2 (ENSPLOG00000005829) FMC1 (ENSPLOG00000005795) UBN2 (ENSPLOG00000005719) TTC26 (ENSPLOG00000005400) ZC3HAV1 (ENSPLOG00000005261) ZC3HAV1L (ENSPLOG00000005246) KIAA1549 (ENSPLOG00000005214) TMEM213 (ENSPLOG00000005188) leopard MODERN SPECIES 23 ENSPPRG00000019397 PRSS37 (ENSPPRG00000024857) TAS2R4 (ENSPPRG00000019408) TAS2R3 (ENSPPRG00000019421) SSBP1 (ENSPPRG00000024849) WEE2 (ENSPPRG00000024844) DENND11 (ENSPPRG00000024839) ENSPPRG00000024832 TMEM178B (ENSPPRG00000024828) MRPS33 (ENSPPRG00000024825) ENSPPRG00000024823 BRAF (ENSPPRG00000024821) NDUFB2 (ENSPPRG00000024808) ADCK2 (ENSPPRG00000024802) DENND2A (ENSPPRG00000024795) MKRN1 (ENSPPRG00000024785) ##22 RAB19 (ENSPPRG00000024782) SLC37A3 (ENSPPRG00000024774) KDM7A (ENSPPRG00000024771) PARP12 (ENSPPRG00000024763) TBXAS1 (ENSPPRG00000024754) HIPK2 (ENSPPRG00000024747) CLEC2L (ENSPPRG00000024741) KLRG2 (ENSPPRG00000024739) LUC7L2 (ENSPPRG00000024688) FMC1 (ENSPPRG00000024680) UBN2 (ENSPPRG00000024665) TTC26 (ENSPPRG00000024609) ZC3HAV1 (ENSPPRG00000024556) ZC3HAV1L (ENSPPRG00000024549) KIAA1549 (ENSPPRG00000024530) Tiger MODERN SPECIES 172 ENSPTIG00000020647 MRPS33 (ENSPTIG00000020846) BRAF (ENSPTIG00000021440) NDUFB2 (ENSPTIG00000021751) ADCK2 (ENSPTIG00000002608) DENND2A (ENSPTIG00000003517) MKRN1 (ENSPTIG00000010774) ##22 RAB19 (ENSPTIG00000012848) SLC37A3 (ENSPTIG00000013841) KDM7A (ENSPTIG00000015958) PARP12 (ENSPTIG00000018638) TBXAS1 (ENSPTIG00000019061) HIPK2 (ENSPTIG00000007654) CLEC2L (ENSPTIG00000009578) LUC7L2 (ENSPTIG00000011142) UBN2 (ENSPTIG00000014322) TTC26 (ENSPTIG00000016891) ZC3HAV1 (ENSPTIG00000006337) ZC3HAV1L (ENSPTIG00000009269) KIAA1549 (ENSPTIG00000009816) TMEM213 (ENSPTIG00000013001) ATP6V0A4 (ENSPTIG00000014321) Cat MODERN SPECIES 1 OR9A4 (ENSFCAG00000046309) OR9A1P (ENSFCAG00000042976) PRSS37 (ENSFCAG00000006573) ENSFCAG00000035640 WEE2 (ENSFCAG00000018517) DENND11 (ENSFCAG00000018973) AGK (ENSFCAG00000005448) TMEM178B (ENSFCAG00000040899) MRPS33 (ENSFCAG00000029690) ENSFCAG00000034313 BRAF (ENSFCAG00000012847) NDUFB2 (ENSFCAG00000036666) ADCK2 (ENSFCAG00000028490) DENND2A (ENSFCAG00000012839) RAB19 (ENSFCAG00000043746) MKRN1 (ENSFCAG00000024942) ##22 SLC37A3 (ENSFCAG00000013041) KDM7A (ENSFCAG00000030285) PARP12 (ENSFCAG00000026388) TBXAS1 (ENSFCAG00000010566) HIPK2 (ENSFCAG00000010565) CLEC2L (ENSFCAG00000027879) KLRG2 (ENSFCAG00000044414) LUC7L2 (ENSFCAG00000010563) UBN2 (ENSFCAG00000012410) TTC26 (ENSFCAG00000012409) ZC3HAV1 (ENSFCAG00000026631) ZC3HAV1L (ENSFCAG00000044828) ENSFCAG00000042598 ENSFCAG00000048191 TMEM213 (ENSFCAG00000042791) Caniformia ANCESTRAL SPECIES 11 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Canidae ANCESTRAL SPECIES 49 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796.z ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.bb ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Canis_lupus ANCESTRAL SPECIES 42 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796.z ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.bb ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Dingo DUPLICATION Dingo DUPLICATION Dingo MODERN SPECIES 236 CHCHD6 (ENSCAFG00020002738) PLXNA1 (ENSCAFG00020002883) TPRA1 (ENSCAFG00020004776) MCM2 (ENSCAFG00020004780) PODXL2 (ENSCAFG00020004787) ABTB1 (ENSCAFG00020004789) MGLL (ENSCAFG00020004791) KBTBD12 (ENSCAFG00020004798) SEC61A1 (ENSCAFG00020004799) RUVBL1 (ENSCAFG00020004803) ENSCAFG00020004807 EEFSEC (ENSCAFG00020004811) DNAJB8 (ENSCAFG00020004815) ENSCAFG00020004821 GATA2 (ENSCAFG00020004824) ENSCAFG00020004831 ##22 RPN1 (ENSCAFG00020004839) RAB7A (ENSCAFG00020004847) H1-10 (ENSCAFG00020004851) HMCES (ENSCAFG00020004852) COPG1 (ENSCAFG00020004856) CNBP (ENSCAFG00020004863) ISY1 (ENSCAFG00020004867) RAB43 (ENSCAFG00020004871) GP9 (ENSCAFG00020004876) ENSCAFG00020004886 CFAP92 (ENSCAFG00020004897) ACAD9 (ENSCAFG00020004917) IQSEC1 (ENSCAFG00020004925) NUP210 (ENSCAFG00020004962) HDAC11 (ENSCAFG00020005611) Dingo MODERN SPECIES 165 ENSCAFG00020003021 CYP26A1 (ENSCAFG00020003012) CYP26C1 (ENSCAFG00020002999) ENSCAFG00020002996 EXOC6 (ENSCAFG00020002347) ENSCAFG00020002283 HHEX (ENSCAFG00020002281) KIF11 (ENSCAFG00020002242) IDE (ENSCAFG00020002136) MARCHF5 (ENSCAFG00020002121) CPEB3 (ENSCAFG00020001981) BTAF1 (ENSCAFG00020001875) ENSCAFG00020001865 FGFBP3 (ENSCAFG00020001860) TNKS2 (ENSCAFG00020000625) ENSCAFG00020000432 ##22 ENSCAFG00020000408 PPP1R3C (ENSCAFG00020000403) HECTD2 (ENSCAFG00020000395) PCGF5 (ENSCAFG00020000355) ENSCAFG00020000337 ANKRD1 (ENSCAFG00020000278) RPP30 (ENSCAFG00020000258) HTR7 (ENSCAFG00020000145) KIF20B (ENSCAFG00020025310) ENSCAFG00020025289 ENSCAFG00020025288 SLC16A12 (ENSCAFG00020025287) IFIT5 (ENSCAFG00020025285) ENSCAFG00020025284 BMS1 (ENSCAFG00020025282) Dingo MODERN SPECIES 389 OR9A1P (ENSCAFG00020021109) PRSS37 (ENSCAFG00020021120) TAS2R5 (ENSCAFG00020021140) TAS2R4 (ENSCAFG00020021144) TAS2R3 (ENSCAFG00020021146) SSBP1 (ENSCAFG00020021147) WEE2 (ENSCAFG00020021149) DENND11 (ENSCAFG00020021162) AGK (ENSCAFG00020021182) TMEM178B (ENSCAFG00020021193) ENSCAFG00020021206 BRAF (ENSCAFG00020021321) NDUFB2 (ENSCAFG00020022084) ADCK2 (ENSCAFG00020022086) DENND2A (ENSCAFG00020022101) ENSCAFG00020022139 ##22 RAB19 (ENSCAFG00020022144) SLC37A3 (ENSCAFG00020022145) KDM7A (ENSCAFG00020022158) PARP12 (ENSCAFG00020022200) TBXAS1 (ENSCAFG00020022217) HIPK2 (ENSCAFG00020022219) CLEC2L (ENSCAFG00020022223) KLRG2 (ENSCAFG00020022227) LUC7L2 (ENSCAFG00020022230) FMC1 (ENSCAFG00020022232) UBN2 (ENSCAFG00020022233) TTC26 (ENSCAFG00020022241) ZC3HAV1 (ENSCAFG00020022308) ZC3HAV1L (ENSCAFG00020022342) ENSCAFG00020022347 Dog MODERN SPECIES 7 ENSCAFG00845030869 PRSS37 (ENSCAFG00845030911) TAS2R5 (ENSCAFG00845030924) TAS2R4 (ENSCAFG00845030928) TAS2R3 (ENSCAFG00845030932) SSBP1 (ENSCAFG00845030936) WEE2 (ENSCAFG00845030950) DENND11 (ENSCAFG00845030968) AGK (ENSCAFG00845030997) TMEM178B (ENSCAFG00845031029) MRPS33 (ENSCAFG00845031033) BRAF (ENSCAFG00845031038) NDUFB2 (ENSCAFG00845031044) ADCK2 (ENSCAFG00845031052) DENND2A (ENSCAFG00845031062) MKRN1 (ENSCAFG00845031068) ##22 RAB19 (ENSCAFG00845031070) SLC37A3 (ENSCAFG00845031071) KDM7A (ENSCAFG00845031073) PARP12 (ENSCAFG00845031074) TBXAS1 (ENSCAFG00845031075) HIPK2 (ENSCAFG00845031079) CLEC2L (ENSCAFG00845031088) KLRG2 (ENSCAFG00845031090) LUC7L2 (ENSCAFG00845031097) FMC1 (ENSCAFG00845031103) UBN2 (ENSCAFG00845031104) TTC26 (ENSCAFG00845031106) ZC3HAV1 (ENSCAFG00845005740) ZC3HAV1L (ENSCAFG00845005840) KIAA1549 (ENSCAFG00845005909) Red fox MODERN SPECIES 167 MGAM2 (ENSVVUG00000027701) MGAM (ENSVVUG00000027858) TAS2R38 (ENSVVUG00000027879) CLEC5A (ENSVVUG00000027880) SSBP1 (ENSVVUG00000027882) PRSS37 (ENSVVUG00000027887) WEE2 (ENSVVUG00000027893) DENND11 (ENSVVUG00000027896) AGK (ENSVVUG00000027904) TMEM178B (ENSVVUG00000001378) MRPS33 (ENSVVUG00000001526) BRAF (ENSVVUG00000001562) NDUFB2 (ENSVVUG00000001582) ADCK2 (ENSVVUG00000001594) DENND2A (ENSVVUG00000001629) MKRN1 (ENSVVUG00000001720) ##22 RAB19 (ENSVVUG00000001737) ENSVVUG00000001761 KDM7A (ENSVVUG00000001798) PARP12 (ENSVVUG00000001841) TBXAS1 (ENSVVUG00000002218) HIPK2 (ENSVVUG00000002267) CLEC2L (ENSVVUG00000002417) LUC7L2 (ENSVVUG00000002469) FMC1 (ENSVVUG00000002485) UBN2 (ENSVVUG00000002507) TTC26 (ENSVVUG00000002570) ENSVVUG00000002617 ZC3HAV1 (ENSVVUG00000002633) ZC3HAV1L (ENSVVUG00000002654) KIAA1549 (ENSVVUG00000002686) Caniformia_b ANCESTRAL SPECIES 9 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT01030000238403 ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Mustelinae ANCESTRAL SPECIES 9 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT01030000238403 ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a American mink MODERN SPECIES 3 PRSS37 (ENSNVIG00000021001) TAS2R5 (ENSNVIG00000021015) TAS2R4 (ENSNVIG00000021019) TAS2R3 (ENSNVIG00000021023) SSBP (ENSNVIG00000021026) WEE2 (ENSNVIG00000021053) DENND11 (ENSNVIG00000021077) AGK (ENSNVIG00000021096) TMEM178B (ENSNVIG00000021305) ENSNVIG00000021311 MRPS33 (ENSNVIG00000021319) BRAF (ENSNVIG00000021330) NDUFB2 (ENSNVIG00000021401) ADCK2 (ENSNVIG00000021423) DENND2A (ENSNVIG00000021437) MKRN1 (ENSNVIG00000021491) ##22 RAB19 (ENSNVIG00000021506) SLC37A3 (ENSNVIG00000021517) KDM7A (ENSNVIG00000021549) PARP12 (ENSNVIG00000021615) TBXAS1 (ENSNVIG00000021641) HIPK2 (ENSNVIG00000021699) CLEC2L (ENSNVIG00000021730) LUC7L2 (ENSNVIG00000021757) FMC1 (ENSNVIG00000021796) UBN2 (ENSNVIG00000021810) TTC26 (ENSNVIG00000021834) ZC3HAV1 (ENSNVIG00000021972) ZC3HAV1L (ENSNVIG00000022006) ENSNVIG00000022021 ENSNVIG00000022030 Ferret MODERN SPECIES 168 ENSMPUG00000003225 PRSS37 (ENSMPUG00000003229) TAS2R5 (ENSMPUG00000018736) TAS2R3 (ENSMPUG00000018738) SSBP1 (ENSMPUG00000003257) WEE2 (ENSMPUG00000003262) DENND11 (ENSMPUG00000003339) AGK (ENSMPUG00000003382) ENSMPUG00000003395 TMEM178B (ENSMPUG00000003400) MRPS33 (ENSMPUG00000003408) BRAF (ENSMPUG00000003411) ENSMPUG00000003423 ADCK2 (ENSMPUG00000003434) DENND2A (ENSMPUG00000003441) MKRN1 (ENSMPUG00000003453) ##22 RAB19 (ENSMPUG00000003462) SLC37A3 (ENSMPUG00000003468) KDM7A (ENSMPUG00000003567) PARP12 (ENSMPUG00000003682) TBXAS1 (ENSMPUG00000003737) HIPK2 (ENSMPUG00000003745) ENSMPUG00000003754 CLEC2L (ENSMPUG00000003760) ENSMPUG00000003762 LUC7L2 (ENSMPUG00000003767) UBN2 (ENSMPUG00000003774) TTC26 (ENSMPUG00000003788) ZC3HAV1 (ENSMPUG00000003805) ZC3HAV1L (ENSMPUG00000003824) KIAA1549 (ENSMPUG00000003830) Ursidae ANCESTRAL SPECIES 12 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796.ab ENSGT00390000002796.`b ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT01030000238403 ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000010316.p ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Ursus ANCESTRAL SPECIES 35 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796.ab ENSGT00390000002796.`b ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT01030000238403 ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00390000010316.p ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a American black bear MODERN SPECIES 3109 MKRN1 (ENSUAMG00000013944) ##22 RAB19 (ENSUAMG00000013948) ENSUAMG00000013951 Polar bear MODERN SPECIES 205 PRSS37 (ENSUMAG00000014967) TAS2R5 (ENSUMAG00000014980) TAS2R4 (ENSUMAG00000014982) TAS2R3 (ENSUMAG00000014985) ENSUMAG00000014987 WEE2 (ENSUMAG00000014990) DENND11 (ENSUMAG00000014996) AGK (ENSUMAG00000014998) TMEM178B (ENSUMAG00000015005) ENSUMAG00000015014 MRPS33 (ENSUMAG00000015017) BRAF (ENSUMAG00000015019) NDUFB2 (ENSUMAG00000015021) ADCK2 (ENSUMAG00000015028) DENND2A (ENSUMAG00000015036) MKRN1 (ENSUMAG00000015046) ##22 RAB19 (ENSUMAG00000015057) ENSUMAG00000015059 KDM7A (ENSUMAG00000015072) PARP12 (ENSUMAG00000015082) TBXAS1 (ENSUMAG00000015133) HIPK2 (ENSUMAG00000015157) CLEC2L (ENSUMAG00000015174) LUC7L2 (ENSUMAG00000015178) FMC1 (ENSUMAG00000015186) UBN2 (ENSUMAG00000015189) ENSUMAG00000015200 TTC26 (ENSUMAG00000015226) ZC3HAV1 (ENSUMAG00000015455) ENSUMAG00000015471 ENSUMAG00000015474 Giant Panda MODERN SPECIES OR9A4 (ENSAMEG00000028272) ENSAMEG00000015114 PRSS37 (ENSAMEG00000015123) TAS2R4 (ENSAMEG00000019793) TAS2R3 (ENSAMEG00000019797) SSBP1 (ENSAMEG00000015145) WEE2 (ENSAMEG00000015162) DENND11 (ENSAMEG00000015190) ENSAMEG00000015205 TMEM178B (ENSAMEG00000029552) MRPS33 (ENSAMEG00000015259) BRAF (ENSAMEG00000015264) NDUFB2 (ENSAMEG00000015328) ADCK2 (ENSAMEG00000017823) DENND2A (ENSAMEG00000017824) MKRN1 (ENSAMEG00000017832) ##22 RAB19 (ENSAMEG00000017842) ENSAMEG00000017845 KDM7A (ENSAMEG00000017856) PARP12 (ENSAMEG00000017865) TBXAS1 (ENSAMEG00000017877) HIPK2 (ENSAMEG00000017889) CLEC2L (ENSAMEG00000017899) KLRG2 (ENSAMEG00000017901) LUC7L2 (ENSAMEG00000017903) ENSAMEG00000030753 UBN2 (ENSAMEG00000017917) TTC26 (ENSAMEG00000017922) ZC3HAV1 (ENSAMEG00000017936) ZC3HAV1L (ENSAMEG00000030912) KIAA1549 (ENSAMEG00000017939) Laurasiatheria_c ANCESTRAL SPECIES 13 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Chiroptera ANCESTRAL SPECIES 41 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Megabat MODERN SPECIES 606 MKRN1 (ENSPVAG00000011185) ##22 Microchiroptera ANCESTRAL SPECIES 23 ENSGT00910000144330 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Microbat DUPLICATION Microbat MODERN SPECIES 1078 TAS2R3 (ENSMLUG00000007928) SSBP1 (ENSMLUG00000007133) WEE2 (ENSMLUG00000029750) DENND11 (ENSMLUG00000007121) AGK (ENSMLUG00000007092) ENSMLUG00000030506 ENSMLUG00000007083 ENSMLUG00000030661 ENSMLUG00000026797 ENSMLUG00000013994 BRAF (ENSMLUG00000007544) NDUFB2 (ENSMLUG00000014604) ADCK2 (ENSMLUG00000007534) ENSMLUG00000029101 DENND2A (ENSMLUG00000006056) ENSMLUG00000006053 ##22 RAB19 (ENSMLUG00000002031) ENSMLUG00000001204 Microbat MODERN SPECIES 938 TBC1D9 (ENSMLUG00000009598) UCP1 (ENSMLUG00000009574) ELMOD2 (ENSMLUG00000009559) MGAT4D (ENSMLUG00000009542) CLGN (ENSMLUG00000014092) SCOC (ENSMLUG00000014087) MAML3 (ENSMLUG00000008845) MGST2 (ENSMLUG00000008833) SETD7 (ENSMLUG00000008810) RAB33B (ENSMLUG00000006803) NAA15 (ENSMLUG00000009086) NDUFC1 (ENSMLUG00000009082) MGARP (ENSMLUG00000009067) ELF2 (ENSMLUG00000009034) NOCT (ENSMLUG00000009023) ENSMLUG00000022677 ##22 SLC7A11 (ENSMLUG00000008864) ENSMLUG00000027616 PCDH18 (ENSMLUG00000015992) PABPC4L (ENSMLUG00000008254) PCDH10 (ENSMLUG00000012385) ENSMLUG00000012525 SCLT1 (ENSMLUG00000008359) JADE1 (ENSMLUG00000008320) PGRMC2 (ENSMLUG00000010259) LARP1B (ENSMLUG00000010229) ABHD18 (ENSMLUG00000005399) MFSD8 (ENSMLUG00000005391) PLK4 (ENSMLUG00000005379) HSPA4L (ENSMLUG00000003044) SLC25A31 (ENSMLUG00000003042) Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 18 CLEC5A (ENSRFEG00010020445) PRSS37 (ENSRFEG00010020580) TAS2R4 (ENSRFEG00010020619) TAS2R3 (ENSRFEG00010020628) SSBP1 (ENSRFEG00010020645) WEE2 (ENSRFEG00010020683) DENND11 (ENSRFEG00010020723) AGK (ENSRFEG00010020764) TMEM178B (ENSRFEG00010020840) MRPS33 (ENSRFEG00010020851) BRAF (ENSRFEG00010020876) NDUFB2 (ENSRFEG00010020950) ENSRFEG00010020971 ADCK2 (ENSRFEG00010020985) DENND2A (ENSRFEG00010021027) ENSRFEG00010006001 ##22 RAB19 (ENSRFEG00010006080) ENSRFEG00010006138 KDM7A (ENSRFEG00010006211) PARP12 (ENSRFEG00010006269) TBXAS1 (ENSRFEG00010006337) HIPK2 (ENSRFEG00010006413) CLEC2L (ENSRFEG00010006453) KLRG2 (ENSRFEG00010006485) LUC7L2 (ENSRFEG00010006550) FMC1 (ENSRFEG00010006671) UBN2 (ENSRFEG00010006720) TTC26 (ENSRFEG00010006905) ZC3HAV1 (ENSRFEG00010007090) ZC3HAV1L (ENSRFEG00010007346) KIAA1549 (ENSRFEG00010007430) Greater horseshoe bat MODERN SPECIES 21 UBD (ENSRFEG00010003224) ENSRFEG00010003241 GABBR1 (ENSRFEG00010003354) MOG (ENSRFEG00010003498) ZFP57 (ENSRFEG00010003536) POLR1H (ENSRFEG00010003551) PPP1R11 (ENSRFEG00010003572) RNF39 (ENSRFEG00010003584) TRIM40 (ENSRFEG00010003611) TRIM10 (ENSRFEG00010003632) TRIM15 (ENSRFEG00010003657) TRIM26 (ENSRFEG00010003687) ENSRFEG00010003710 ENSRFEG00010003734 ENSRFEG00010003760 ENSRFEG00010003766 ##22 ENSRFEG00010003773 TRIM39 (ENSRFEG00010003781) ENSRFEG00010003805 GNL1 (ENSRFEG00010003829) PRR3 (ENSRFEG00010003862) ABCF1 (ENSRFEG00010003926) PPP1R10 (ENSRFEG00010003989) MRPS18B (ENSRFEG00010000149) ATAT1 (ENSRFEG00010000179) C6orf136 (ENSRFEG00010000224) DHX16 (ENSRFEG00010000267) PPP1R18 (ENSRFEG00010000304) NRM (ENSRFEG00010000322) MDC1 (ENSRFEG00010000340) TUBB (ENSRFEG00010000368) Artiodactyla ANCESTRAL SPECIES 11 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Suina ANCESTRAL SPECIES 19 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Pig MODERN SPECIES 9 ENSSSCG00000027039 PRSS37 (ENSSSCG00000029612) TAS2R4 (ENSSSCG00000021525) TAS2R3 (ENSSSCG00000028394) SSBP1 (ENSSSCG00000016488) WEE2 (ENSSSCG00000016489) DENND11 (ENSSSCG00000016491) AGK (ENSSSCG00000016492) TMEM178B (ENSSSCG00000016493) MRPS33 (ENSSSCG00000013470) ENSSSCG00000041343 BRAF (ENSSSCG00000016494) NDUFB2 (ENSSSCG00000032390) ADCK2 (ENSSSCG00000016496) DENND2A (ENSSSCG00000016497) MKRN1 (ENSSSCG00000016498) ##22 RAB19 (ENSSSCG00000038693) SLC37A3 (ENSSSCG00000032266) ENSSSCG00000039349 KDM7A (ENSSSCG00000016501) PARP12 (ENSSSCG00000016502) TBXAS1 (ENSSSCG00000016504) HIPK2 (ENSSSCG00000026733) CLEC2L (ENSSSCG00000038147) KLRG2 (ENSSSCG00000055501) ENSSSCG00000051926 LUC7L2 (ENSSSCG00000016509) FMC1 (ENSSSCG00000038700) UBN2 (ENSSSCG00000016510) TTC26 (ENSSSCG00000016511) ZC3HAV1 (ENSSSCG00000016512) Chacoan peccary MODERN SPECIES 115 TAS2R4 (ENSCWAG00000017801) TAS2R3 (ENSCWAG00000017788) SSBP1 (ENSCWAG00000017760) WEE2 (ENSCWAG00000017685) DENND11 (ENSCWAG00000017576) AGK (ENSCWAG00000017395) TMEM178B (ENSCWAG00000017339) ENSCWAG00000017305 ENSCWAG00000017296 ENSCWAG00000017265 ENSCWAG00000017237 BRAF (ENSCWAG00000016905) NDUFB2 (ENSCWAG00000016781) ADCK2 (ENSCWAG00000016718) DENND2A (ENSCWAG00000016505) MKRN1 (ENSCWAG00000016439) ##22 RAB19 (ENSCWAG00000016413) SLC37A3 (ENSCWAG00000016357) KDM7A (ENSCWAG00000016230) PARP12 (ENSCWAG00000016140) TBXAS1 (ENSCWAG00000015553) HIPK2 (ENSCWAG00000015491) CLEC2L (ENSCWAG00000015440) KLRG2 (ENSCWAG00000015371) ENSCWAG00000015342 LUC7L2 (ENSCWAG00000015124) FMC1 (ENSCWAG00000015084) UBN2 (ENSCWAG00000014917) TTC26 (ENSCWAG00000014674) ZC3HAV1 (ENSCWAG00000014616) ZC3HAV1L (ENSCWAG00000014559) Artiodactyla_a ANCESTRAL SPECIES 11 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Camelidae ANCESTRAL SPECIES 2 ENSGT01100000263477.A.a.a ENSGT00910000144330 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 Arabian camel MODERN SPECIES 33 ENSCDRG00005005559 MGAM (ENSCDRG00005005484) TAS2R38 (ENSCDRG00005005420) ENSCDRG00005005393 PRSS37 (ENSCDRG00005004595) SSBP1 (ENSCDRG00005004546) WEE2 (ENSCDRG00005004501) DENND11 (ENSCDRG00005004485) AGK (ENSCDRG00005004378) TMEM178B (ENSCDRG00005004347) MRPS33 (ENSCDRG00005004320) BRAF (ENSCDRG00005004131) NDUFB2 (ENSCDRG00005004074) ADCK2 (ENSCDRG00005004011) DENND2A (ENSCDRG00005003834) MKRN1 (ENSCDRG00005003742) ##22 RAB19 (ENSCDRG00005003711) SLC37A3 (ENSCDRG00005003585) KDM7A (ENSCDRG00005003493) PARP12 (ENSCDRG00005003422) TBXAS1 (ENSCDRG00005003325) HIPK2 (ENSCDRG00005003145) CLEC2L (ENSCDRG00005003087) KLRG2 (ENSCDRG00005003077) LUC7L2 (ENSCDRG00005003003) FMC1 (ENSCDRG00005002964) UBN2 (ENSCDRG00005002941) TTC26 (ENSCDRG00005002841) ZC3HAV1 (ENSCDRG00005002783) ZC3HAV1L (ENSCDRG00005002761) KIAA1549 (ENSCDRG00005002734) Alpaca MODERN SPECIES 458 DENND2A (ENSVPAG00000004144) MKRN1 (ENSVPAG00000004143) ##22 ENSVPAG00000004142 KDM7A (ENSVPAG00000004141) ENSVPAG00000004140 TBXAS1 (ENSVPAG00000004139) Artiodactyla_b ANCESTRAL SPECIES 11 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Pecora ANCESTRAL SPECIES 11 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044.jb ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 9 PRSS37 (ENSCHYG00000021973) TAS2R4 (ENSCHYG00000021959) TAS2R3 (ENSCHYG00000021939) ENSCHYG00000021894 WEE2 (ENSCHYG00000021766) ENSCHYG00000021735 DENND11 (ENSCHYG00000021628) AGK (ENSCHYG00000021039) ENSCHYG00000020854 TMEM178B (ENSCHYG00000020754) ENSCHYG00000020681 BRAF (ENSCHYG00000020466) NDUFB2 (ENSCHYG00000020392) ADCK2 (ENSCHYG00000020204) DENND2A (ENSCHYG00000020046) ENSCHYG00000019857 ##22 RAB19 (ENSCHYG00000019781) SLC37A3 (ENSCHYG00000019327) ENSCHYG00000019273 KDM7A (ENSCHYG00000018853) TBXAS1 (ENSCHYG00000018526) ENSCHYG00000018450 HIPK2 (ENSCHYG00000018349) CLEC2L (ENSCHYG00000018280) KLRG2 (ENSCHYG00000018230) LUC7L2 (ENSCHYG00000017618) ENSCHYG00000017474 ENSCHYG00000017427 UBN2 (ENSCHYG00000017017) TTC26 (ENSCHYG00000016684) ENSCHYG00000016640 Yarkand deer MODERN SPECIES 1323 CYLC1 (ENSCHYG00000022460) ENSCHYG00000022492 POU3F4 (ENSCHYG00000022504) ENSCHYG00000022538 ENSCHYG00000022587 ENSCHYG00000008699 ENSCHYG00000008712 SH3BGRL (ENSCHYG00000008735) ENSCHYG00000008778 ENSCHYG00000008869 ENSCHYG00000008921 BRWD3 (ENSCHYG00000008984) ENSCHYG00000009463 ENSCHYG00000009482 TENT5D (ENSCHYG00000009524) ENSCHYG00000009550 ##22 TBX22 (ENSCHYG00000009606) ITM2A (ENSCHYG00000009688) GPR174 (ENSCHYG00000009735) P2RY10 (ENSCHYG00000009753) LPAR4 (ENSCHYG00000009794) CYSLTR1 (ENSCHYG00000009807) ENSCHYG00000009821 TAF9B (ENSCHYG00000010082) ENSCHYG00000010187 ENSCHYG00000010325 ENSCHYG00000010341 ATP7A (ENSCHYG00000010379) ENSCHYG00000010895 MAGT1 (ENSCHYG00000010961) ATRX (ENSCHYG00000011090) Percora_a ANCESTRAL SPECIES 11 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044.jb ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Bovidae ANCESTRAL SPECIES 12 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044.jb ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Bovinae ANCESTRAL SPECIES 8 ENSGT00940000164718.b.a.b ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044.jb ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Bos ANCESTRAL SPECIES 8 ENSGT00940000164718.b.a.a ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044.jb ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Bos_a ANCESTRAL SPECIES 12 ENSGT00940000164718.b.a.a ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044.jb ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Wild yak DUPLICATION Wild yak MODERN SPECIES 1126 ADCK2 (ENSBMUG00000016561) DENND2A (ENSBMUG00000016585) ENSBMUG00000016607 ##22 RAB19 (ENSBMUG00000016623) SLC37A3 (ENSBMUG00000016724) KDM7A (ENSBMUG00000016755) PARP12 (ENSBMUG00000016774) TBXAS1 (ENSBMUG00000016845) HIPK2 (ENSBMUG00000016940) CLEC2L (ENSBMUG00000016955) LUC7L2 (ENSBMUG00000017040) UBN2 (ENSBMUG00000017094) TTC26 (ENSBMUG00000017280) ZC3HAV1 (ENSBMUG00000017318) ZC3HAV1L (ENSBMUG00000017358) KIAA1549 (ENSBMUG00000017402) TMEM213 (ENSBMUG00000017427) Wild yak MODERN SPECIES 214 ENSBMUG00000013392 ##22 CCNG1 (ENSBMUG00000013442) NUDCD2 (ENSBMUG00000013468) HMMR (ENSBMUG00000013578) MAT2B (ENSBMUG00000013682) ENSBMUG00000013697 Wild yak MODERN SPECIES 288 REPS2 (ENSBMUG00000008698) ENSBMUG00000008766 NHS (ENSBMUG00000008796) ENSBMUG00000008832 ENSBMUG00000008850 RAI2 (ENSBMUG00000008857) ENSBMUG00000008870 ##22 SCML2 (ENSBMUG00000008929) CDKL5 (ENSBMUG00000008969) RS1 (ENSBMUG00000008989) Domestic yak DUPLICATION Domestic yak MODERN SPECIES 27 ENSBGRG00000017048 ADRA1B (ENSBGRG00000017305) TTC1 (ENSBGRG00000017355) PWWP2A (ENSBGRG00000017485) FABP6 (ENSBGRG00000017725) C1QTNF2 (ENSBGRG00000017808) FAM200C (ENSBGRG00000017873) SLU7 (ENSBGRG00000000435) ENSBGRG00000000492 ATP10B (ENSBGRG00000000552) ENSBGRG00000000592 GABRB2 (ENSBGRG00000000613) GABRA6 (ENSBGRG00000000691) GABRA1 (ENSBGRG00000000742) GABRG2 (ENSBGRG00000000798) ENSBGRG00000000879 ##22 ENSBGRG00000000892 CCNG1 (ENSBGRG00000000900) NUDCD2 (ENSBGRG00000000943) HMMR (ENSBGRG00000000998) ENSBGRG00000001288 MAT2B (ENSBGRG00000001300) ENSBGRG00000001331 ENSBGRG00000001350 ENSBGRG00000001381 ENSBGRG00000001389 ENSBGRG00000001405 ENSBGRG00000001416 ENSBGRG00000001421 ENSBGRG00000001444 TENM2 (ENSBGRG00000001510) Domestic yak MODERN SPECIES 23 TAS2R4 (ENSBGRG00000016236) TAS2R3 (ENSBGRG00000016256) SSBP1 (ENSBGRG00000016274) WEE2 (ENSBGRG00000016334) DENND11 (ENSBGRG00000016745) AGK (ENSBGRG00000016854) ENSBGRG00000017373 ENSBGRG00000017649 ENSBGRG00000000238 MRPS33 (ENSBGRG00000000246) BRAF (ENSBGRG00000000301) ENSBGRG00000000525 ADCK2 (ENSBGRG00000000551) DENND2A (ENSBGRG00000000595) ENSBGRG00000000626 ENSBGRG00000000642 ##22 RAB19 (ENSBGRG00000000744) SLC37A3 (ENSBGRG00000000779) KDM7A (ENSBGRG00000000910) PARP12 (ENSBGRG00000000969) TBXAS1 (ENSBGRG00000001023) HIPK2 (ENSBGRG00000001427) CLEC2L (ENSBGRG00000001538) KLRG2 (ENSBGRG00000001554) LUC7L2 (ENSBGRG00000001577) FMC1 (ENSBGRG00000001622) UBN2 (ENSBGRG00000001662) ENSBGRG00000001790 TTC26 (ENSBGRG00000001859) ZC3HAV1 (ENSBGRG00000002613) ZC3HAV1L (ENSBGRG00000002656) Bos_b ANCESTRAL SPECIES 7 ENSGT00940000164718.b.a.a ENSGT00940000164718.b.a.b ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044.jb ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Cow MODERN SPECIES 23 ENSBTAG00000027341 PRSS37 (ENSBTAG00000018442) TAS2R4 (ENSBTAG00000018440) TAS2R3 (ENSBTAG00000016880) SSBP1 (ENSBTAG00000010931) WEE2 (ENSBTAG00000004658) DENND11 (ENSBTAG00000016879) AGK (ENSBTAG00000019265) ENSBTAG00000053379 ENSBTAG00000051724 MRPS33 (ENSBTAG00000005285) BRAF (ENSBTAG00000021761) NDUFB2 (ENSBTAG00000021759) ADCK2 (ENSBTAG00000020484) DENND2A (ENSBTAG00000004799) MKRN1 (ENSBTAG00000008306) ##22 RAB19 (ENSBTAG00000012261) SLC37A3 (ENSBTAG00000012239) KDM7A (ENSBTAG00000003495) PARP12 (ENSBTAG00000016546) TBXAS1 (ENSBTAG00000020225) HIPK2 (ENSBTAG00000017860) CLEC2L (ENSBTAG00000038854) KLRG2 (ENSBTAG00000017793) LUC7L2 (ENSBTAG00000017770) FMC1 (ENSBTAG00000053406) UBN2 (ENSBTAG00000014021) TTC26 (ENSBTAG00000016373) ZC3HAV1 (ENSBTAG00000021617) ZC3HAV1L (ENSBTAG00000014250) KIAA1549 (ENSBTAG00000021073) Hybrid Bos Indicus MODERN SPECIES 23 ENSBIXG00005030540 PRSS37 (ENSBIXG00005030543) TAS2R4 (ENSBIXG00005030549) TAS2R3 (ENSBIXG00005030551) SSBP1 (ENSBIXG00005030556) WEE2 (ENSBIXG00005030568) DENND11 (ENSBIXG00005030578) AGK (ENSBIXG00005030624) ENSBIXG00005030668 TMEM178B (ENSBIXG00005030684) MRPS33 (ENSBIXG00005030703) BRAF (ENSBIXG00005030730) ENSBIXG00005030783 ADCK2 (ENSBIXG00005030802) DENND2A (ENSBIXG00005030818) MKRN1 (ENSBIXG00005030841) ##22 RAB19 (ENSBIXG00005030856) SLC37A3 (ENSBIXG00005030870) KDM7A (ENSBIXG00005030888) ENSBIXG00005030894 PARP12 (ENSBIXG00005030898) TBXAS1 (ENSBIXG00005030915) ENSBIXG00005030936 HIPK2 (ENSBIXG00005030949) CLEC2L (ENSBIXG00005030966) KLRG2 (ENSBIXG00005030971) LUC7L2 (ENSBIXG00005030979) FMC1 (ENSBIXG00005030989) UBN2 (ENSBIXG00005030993) TTC26 (ENSBIXG00005031016) ZC3HAV1 (ENSBIXG00005031046) American bison DUPLICATION American bison MODERN SPECIES 3266 ENSBBBG00000001280 OR9A4 (ENSBBBG00000001275) PRSS37 (ENSBBBG00000001257) TAS2R4 (ENSBBBG00000015322) TAS2R3 (ENSBBBG00000015325) SSBP1 (ENSBBBG00000003813) WEE2 (ENSBBBG00000015353) DENND11 (ENSBBBG00000015364) AGK (ENSBBBG00000015486) TMEM178B (ENSBBBG00000015500) MRPS33 (ENSBBBG00000015506) BRAF (ENSBBBG00000015611) ENSBBBG00000003447 ADCK2 (ENSBBBG00000003435) DENND2A (ENSBBBG00000015682) ENSBBBG00000015693 ##22 RAB19 (ENSBBBG00000003919) SLC37A3 (ENSBBBG00000015735) KDM7A (ENSBBBG00000007563) PARP12 (ENSBBBG00000003932) TBXAS1 (ENSBBBG00000015965) HIPK2 (ENSBBBG00000016041) CLEC2L (ENSBBBG00000008332) LUC7L2 (ENSBBBG00000016115) FMC1 (ENSBBBG00000016119) UBN2 (ENSBBBG00000016136) TTC26 (ENSBBBG00000004052) ZC3HAV1 (ENSBBBG00000016444) ZC3HAV1L (ENSBBBG00000016458) ENSBBBG00000007567 ENSBBBG00000016470 American bison MODERN SPECIES 3347 ENSBBBG00000015546 ##22 ENSBBBG00000015539 NUDCD2 (ENSBBBG00000015507) HMMR (ENSBBBG00000015491) MAT2B (ENSBBBG00000015365) ENSBBBG00000003815 TENM2 (ENSBBBG00000003500) WWC1 (ENSBBBG00000015306) ENSBBBG00000015267 RARS1 (ENSBBBG00000015251) FBLL1 (ENSBBBG00000015226) ZFYVE16 (ENSBBBG00000008156) FAM151B (ENSBBBG00000003762) ANKRD34B (ENSBBBG00000015166) ENSBBBG00000003536 MSH3 (ENSBBBG00000002773) Caprinae ANCESTRAL SPECIES 10 ENSGT00940000164718.b ENSGT00940000161483 ENSGT01100000263477.A.a.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.mb ENSGT00940000156154 ENSGT00390000004044.jb ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 20 ENSOARG00020005951 ENSOARG00020005924 PRSS37 (ENSOARG00020005886) TAS2R4 (ENSOARG00020005852) TAS2R3 (ENSOARG00020005838) SSBP1 (ENSOARG00020005814) WEE2 (ENSOARG00020005754) DENND11 (ENSOARG00020005703) AGK (ENSOARG00020005551) TMEM178B (ENSOARG00020005515) ENSOARG00020005487 BRAF (ENSOARG00020005423) NDUFB2 (ENSOARG00020005380) ADCK2 (ENSOARG00020005352) DENND2A (ENSOARG00020005286) ENSOARG00020005232 ##22 RAB19 (ENSOARG00020005219) SLC37A3 (ENSOARG00020005137) KDM7A (ENSOARG00020005079) TBXAS1 (ENSOARG00020004929) HIPK2 (ENSOARG00020004569) CLEC2L (ENSOARG00020004521) KLRG2 (ENSOARG00020004487) FMC1-LUC7L2 (ENSOARG00020004362) FMC1 (ENSOARG00020004330) UBN2 (ENSOARG00020004198) TTC26 (ENSOARG00020002954) ENSOARG00020002892 ZC3HAV1L (ENSOARG00020002872) TMEM213 (ENSOARG00020002840) ATP6V0A4 (ENSOARG00020002806) Rambouillet Sheep MODERN SPECIES 21 FABP6 (ENSOARG00020023698) CCNJL (ENSOARG00020009830) C1QTNF2 (ENSOARG00020009842) FAM200C (ENSOARG00020009899) SLU7 (ENSOARG00020009922) ENSOARG00020010052 ATP10B (ENSOARG00020010158) ENSOARG00020011112 ENSOARG00020011126 GABRB2 (ENSOARG00020011231) ENSOARG00020011452 GABRA6 (ENSOARG00020011485) ENSOARG00020011653 GABRA1 (ENSOARG00020011698) GABRG2 (ENSOARG00020011835) ENSOARG00020012340 ##22 CCNG1 (ENSOARG00020012387) NUDCD2 (ENSOARG00020012608) HMMR (ENSOARG00020012695) ENSOARG00020012972 MAT2B (ENSOARG00020013000) ENSOARG00020013170 ENSOARG00020013238 ENSOARG00020013302 TENM2 (ENSOARG00020013483) WWC1 (ENSOARG00020015297) RARS1 (ENSOARG00020015698) ENSOARG00020015828 FBLL1 (ENSOARG00020015848) ZFYVE16 (ENSOARG00020015887) ANKRD34B (ENSOARG00020016203) Goat DUPLICATION Goat MODERN SPECIES 23 TAS2R5 (ENSCHIG00000013989) TAS2R4 (ENSCHIG00000011112) TAS2R3 (ENSCHIG00000010773) ENSCHIG00000014181 ENSCHIG00000018792 DENND11 (ENSCHIG00000015543) AGK (ENSCHIG00000023107) ENSCHIG00000024421 ENSCHIG00000012235 ENSCHIG00000023631 ENSCHIG00000011022 BRAF (ENSCHIG00000018376) NDUFB2 (ENSCHIG00000016937) ADCK2 (ENSCHIG00000025299) DENND2A (ENSCHIG00000023014) ENSCHIG00000024804 ##22 RAB19 (ENSCHIG00000006465) SLC37A3 (ENSCHIG00000009119) KDM7A (ENSCHIG00000013546) PARP12 (ENSCHIG00000014673) TBXAS1 (ENSCHIG00000025353) HIPK2 (ENSCHIG00000021186) CLEC2L (ENSCHIG00000026857) ENSCHIG00000009828 FMC1 (ENSCHIG00000017107) UBN2 (ENSCHIG00000024022) TTC26 (ENSCHIG00000026656) ZC3HAV1 (ENSCHIG00000025661) ZC3HAV1L (ENSCHIG00000012540) KIAA1549 (ENSCHIG00000024350) ATP6V0A4 (ENSCHIG00000024394) Goat MODERN SPECIES 26 UBLCP1 (ENSCHIG00000027116) IL12B (ENSCHIG00000016932) ADRA1B (ENSCHIG00000018230) TTC1 (ENSCHIG00000012242) PWWP2A (ENSCHIG00000012956) FABP6 (ENSCHIG00000013198) CCNJL (ENSCHIG00000019393) C1QTNF2 (ENSCHIG00000009887) SLU7 (ENSCHIG00000013793) ENSCHIG00000027118 ATP10B (ENSCHIG00000024331) GABRB2 (ENSCHIG00000024858) GABRA6 (ENSCHIG00000021600) GABRA1 (ENSCHIG00000019387) GABRG2 (ENSCHIG00000022523) ENSCHIG00000013606 ##22 CCNG1 (ENSCHIG00000004699) ENSCHIG00000026565 HMMR (ENSCHIG00000026654) MAT2B (ENSCHIG00000027101) ENSCHIG00000027115 TENM2 (ENSCHIG00000025474) ENSCHIG00000018606 WWC1 (ENSCHIG00000012879) ENSCHIG00000023409 RARS1 (ENSCHIG00000021126) FBLL1 (ENSCHIG00000005751) ZFYVE16 (ENSCHIG00000022133) FAM151B (ENSCHIG00000009422) ANKRD34B (ENSCHIG00000009844) ENSCHIG00000016160 Goat MODERN SPECIES 29 ENSCHIG00000023069 AP1S2 (ENSCHIG00000018502) ENSCHIG00000020767 GRPR (ENSCHIG00000011617) ENSCHIG00000021293 PHKA2 (ENSCHIG00000010821) TXLNG (ENSCHIG00000012205) SYAP1 (ENSCHIG00000021143) S100G (ENSCHIG00000016758) CTPS2 (ENSCHIG00000003270) REPS2 (ENSCHIG00000011491) NHS (ENSCHIG00000015038) ENSCHIG00000007744 ENSCHIG00000001926 ENSCHIG00000008666 ENSCHIG00000008394 ##22 ENSCHIG00000019919 ENSCHIG00000014610 ENSCHIG00000023671 CDKL5 (ENSCHIG00000010574) RS1 (ENSCHIG00000022783) PPEF1 (ENSCHIG00000017281) ENSCHIG00000012595 ADGRG2 (ENSCHIG00000012482) ENSCHIG00000016862 ENSCHIG00000019669 PRPS2 (ENSCHIG00000006680) TLR7 (ENSCHIG00000021012) TLR8 (ENSCHIG00000016625) ENSCHIG00000002946 BCLAF3 (ENSCHIG00000025713) Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 84 OR9A1P (ENSMMSG00000001418) OR9A4 (ENSMMSG00000001426) PRSS37 (ENSMMSG00000001438) TAS2R4 (ENSMMSG00000001467) TAS2R3 (ENSMMSG00000001474) SSBP1 (ENSMMSG00000001484) WEE2 (ENSMMSG00000001502) DENND11 (ENSMMSG00000001523) AGK (ENSMMSG00000001568) TMEM178B (ENSMMSG00000001648) MRPS33 (ENSMMSG00000001665) BRAF (ENSMMSG00000001692) ENSMMSG00000001727 ADCK2 (ENSMMSG00000001742) DENND2A (ENSMMSG00000001773) ENSMMSG00000001799 ##22 RAB19 (ENSMMSG00000001820) SLC37A3 (ENSMMSG00000001841) KDM7A (ENSMMSG00000001870) PARP12 (ENSMMSG00000001913) ENSMMSG00000001940 TBXAS1 (ENSMMSG00000001965) HIPK2 (ENSMMSG00000002055) CLEC2L (ENSMMSG00000002084) KLRG2 (ENSMMSG00000002097) ENSMMSG00000002122 FMC1 (ENSMMSG00000002251) UBN2 (ENSMMSG00000002273) TTC26 (ENSMMSG00000002356) ZC3HAV1 (ENSMMSG00000002512) ZC3HAV1L (ENSMMSG00000002539) Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 1277 TMC3 (ENSMMSG00000021108) ENSMMSG00000023000 MPHOSPH10 (ENSMMSG00000022988) FAN1 (ENSMMSG00000022979) MTMR10 (ENSMMSG00000022957) TRPM1 (ENSMMSG00000022825) KLF13 (ENSMMSG00000022801) ENSMMSG00000022794 APBA2 (ENSMMSG00000022753) ENTREP2 (ENSMMSG00000022719) TJP1 (ENSMMSG00000022548) TARS3 (ENSMMSG00000022494) TM2D3 (ENSMMSG00000022468) PCSK6 (ENSMMSG00000022137) ENSMMSG00000022057 ENSMMSG00000022036 ##22 CHRNA7 (ENSMMSG00000021997) ENSMMSG00000021987 Siberian musk deer MODERN SPECIES 108 SCARA3 (ENSMMSG00000019401) ENSMMSG00000019448 ENSMMSG00000019467 TMEM215 (ENSMMSG00000019484) ENSMMSG00000019494 NDUFB6 (ENSMMSG00000019514) ENSMMSG00000019527 TOPORS (ENSMMSG00000019541) RIGI (ENSMMSG00000019559) ACO1 (ENSMMSG00000019601) ENSMMSG00000019650 ##22 ENSMMSG00000000015 ENSMMSG00000000028 LINGO2 (ENSMMSG00000000040) ENSMMSG00000000050 C9orf72 (ENSMMSG00000000067) MOB3B (ENSMMSG00000000088) ENSMMSG00000000106 ENSMMSG00000000118 TEK (ENSMMSG00000000195) IFT74 (ENSMMSG00000000361) LRRC19 (ENSMMSG00000000437) PLAA (ENSMMSG00000000462) CAAP1 (ENSMMSG00000000493) ENSMMSG00000000515 TUSC1 (ENSMMSG00000000526) Cetacea ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Blue whale MODERN SPECIES 20 PRSS58 (ENSBMSG00010013894) ENSBMSG00010013939 MGAM (ENSBMSG00010014030) PRSS37 (ENSBMSG00010014322) ENSBMSG00010014422 WEE2 (ENSBMSG00010014473) DENND11 (ENSBMSG00010014559) AGK (ENSBMSG00010014634) TMEM178B (ENSBMSG00010014839) ENSBMSG00010014857 BRAF (ENSBMSG00010014913) ENSBMSG00010014979 ADCK2 (ENSBMSG00010015030) ENSBMSG00010015079 ENSBMSG00010015236 MKRN1 (ENSBMSG00010015275) ##22 RAB19 (ENSBMSG00010015336) SLC37A3 (ENSBMSG00010015373) KDM7A (ENSBMSG00010015443) PARP12 (ENSBMSG00010015492) TBXAS1 (ENSBMSG00010015590) HIPK2 (ENSBMSG00010015894) CLEC2L (ENSBMSG00010015919) ENSBMSG00010015939 ENSBMSG00010015978 FMC1 (ENSBMSG00010016170) UBN2 (ENSBMSG00010016203) TTC26 (ENSBMSG00010016321) ZC3HAV1 (ENSBMSG00010016557) ZC3HAV1L (ENSBMSG00010016653) KIAA1549 (ENSBMSG00010016706) Odontoceti ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 16 MGAM (ENSPCTG00005001373) TAS2R38 (ENSPCTG00005001461) PRSS37 (ENSPCTG00005001480) TAS2R4 (ENSPCTG00005001494) SSBP1 (ENSPCTG00005001511) ENSPCTG00005001533 WEE2 (ENSPCTG00005001548) KIAA1147 (ENSPCTG00005001569) AGK (ENSPCTG00005001621) TMEM178B (ENSPCTG00005001699) MRPS33 (ENSPCTG00005001712) BRAF (ENSPCTG00005001762) ENSPCTG00005001882 DENND2A (ENSPCTG00005001895) ADCK2 (ENSPCTG00005001907) MKRN1 (ENSPCTG00005001919) ##22 RAB19 (ENSPCTG00005001933) SLC37A3 (ENSPCTG00005001973) KDM7A (ENSPCTG00005002076) ENSPCTG00005002106 TBXAS1 (ENSPCTG00005002127) HIPK2 (ENSPCTG00005002204) CLEC2L (ENSPCTG00005002278) KLRG2 (ENSPCTG00005002291) LUC7L2 (ENSPCTG00005002322) FMC1 (ENSPCTG00005002409) UBN2 (ENSPCTG00005002430) TTC26 (ENSPCTG00005002496) ZC3HAV1 (ENSPCTG00005002561) ZC3HAV1L (ENSPCTG00005002606) KIAA1549 (ENSPCTG00005002642) Sperm whale MODERN SPECIES 18 NIPAL1 (ENSPCTG00005008004) CNGA1 (ENSPCTG00005008032) NFXL1 (ENSPCTG00005008066) CORIN (ENSPCTG00005008164) ENSPCTG00005000323 ATP10D (ENSPCTG00005000367) COMMD8 (ENSPCTG00005000436) GABRB1 (ENSPCTG00005000470) GABRA4 (ENSPCTG00005000486) ENSPCTG00005000506 COX7B2 (ENSPCTG00005000515) GABRA2 (ENSPCTG00005000542) GABRG1 (ENSPCTG00005000574) GNPDA2 (ENSPCTG00005000612) GUF1 (ENSPCTG00005000657) ENSPCTG00005000696 ##22 TLL1 (ENSPCTG00005000720) CPE (ENSPCTG00005000793) MSMO1 (ENSPCTG00005000817) KLHL2 (ENSPCTG00005000844) TMEM192 (ENSPCTG00005000934) ENSPCTG00005000991 HSD17B13 (ENSPCTG00005001010) KLHL8 (ENSPCTG00005001049) AFF1 (ENSPCTG00005001103) C7H4orf36 (ENSPCTG00005001168) SLC10A6 (ENSPCTG00005001180) PTPN13 (ENSPCTG00005001290) ENSPCTG00005001550 MAPK10 (ENSPCTG00005001640) ARHGAP24 (ENSPCTG00005001841) Euarchontoglires ANCESTRAL SPECIES 165 ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000163139 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Tree shrew MODERN SPECIES 1502 ENSTBEG00000004564 ##22 Glires ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Rodentia ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Rodentia_A ANCESTRAL SPECIES 12 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Sciuridae ANCESTRAL SPECIES 7 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Eurasian red squirrel MODERN SPECIES 17 PRSS37 (ENSSVLG00005010291) ENSSVLG00005010344 ENSSVLG00005010410 SSBP1 (ENSSVLG00005010423) ENSSVLG00005010476 DENND11 (ENSSVLG00005010569) AGK (ENSSVLG00005010726) TMEM178B (ENSSVLG00005010943) MRPS33 (ENSSVLG00005011000) ENSSVLG00005011057 BRAF (ENSSVLG00005011137) NDUFB2 (ENSSVLG00005011276) ADCK2 (ENSSVLG00005011400) DENND2A (ENSSVLG00005011668) ENSSVLG00005012011 ##22 ENSSVLG00005012241 ##22 RAB19 (ENSSVLG00005012313) ENSSVLG00005012379 KDM7A (ENSSVLG00005012470) PARP12 (ENSSVLG00005012700) TBXAS1 (ENSSVLG00005012901) ENSSVLG00005013242 CLEC2L (ENSSVLG00005013292) ENSSVLG00005013322 KLRG2 (ENSSVLG00005013366) ENSSVLG00005013655 FMC1 (ENSSVLG00005013741) UBN2 (ENSSVLG00005013924) TTC26 (ENSSVLG00005014352) ENSSVLG00005015458 ZC3HAV1 (ENSSVLG00005015477) Marmotini ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Marmotini_b ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Arctic ground squirrel MODERN SPECIES 820 ENSUPAG00010010441 ##22 Squirrel DUPLICATION Squirrel MODERN SPECIES 192 ENSSTOG00000003319 CLEC5A (ENSSTOG00000015960) OR9A4 (ENSSTOG00000028119) PRSS37 (ENSSTOG00000014505) SSBP1 (ENSSTOG00000007007) DENND11 (ENSSTOG00000006980) AGK (ENSSTOG00000020008) TMEM178B (ENSSTOG00000023428) ENSSTOG00000001019 BRAF (ENSSTOG00000002569) NDUFB2 (ENSSTOG00000002566) ADCK2 (ENSSTOG00000002559) DENND2A (ENSSTOG00000002912) ENSSTOG00000031161 ##22 ENSSTOG00000010929 KDM7A (ENSSTOG00000012789) PARP12 (ENSSTOG00000004578) TBXAS1 (ENSSTOG00000004552) HIPK2 (ENSSTOG00000005957) CLEC2L (ENSSTOG00000021797) LUC7L2 (ENSSTOG00000014706) UBN2 (ENSSTOG00000013270) TTC26 (ENSSTOG00000023941) ZC3HAV1 (ENSSTOG00000005662) ZC3HAV1L (ENSSTOG00000005656) KIAA1549 (ENSSTOG00000005902) TMEM213 (ENSSTOG00000024891) ATP6V0A4 (ENSSTOG00000001786) SVOPL (ENSSTOG00000007843) Squirrel MODERN SPECIES 83 ENSSTOG00000011560 ENSSTOG00000034936 DET1 (ENSSTOG00000021107) MRPS11 (ENSSTOG00000021237) MRPL46 (ENSSTOG00000011555) NTRK3 (ENSSTOG00000003812) AGBL1 (ENSSTOG00000014915) KLHL25 (ENSSTOG00000023823) ENSSTOG00000020484 SV2B (ENSSTOG00000011621) SLCO3A1 (ENSSTOG00000012990) ST8SIA2 (ENSSTOG00000012529) CHD2 (ENSSTOG00000001270) RGMA (ENSSTOG00000023280) MCTP2 (ENSSTOG00000026484) ENSSTOG00000022562 ##22 NR2F2 (ENSSTOG00000025965) ARRDC4 (ENSSTOG00000012169) ENSSTOG00000021739 ENSSTOG00000011427 IGF1R (ENSSTOG00000011400) SYNM (ENSSTOG00000022419) TTC23 (ENSSTOG00000004362) LRRC28 (ENSSTOG00000004380) MEF2A (ENSSTOG00000028856) LYSMD4 (ENSSTOG00000005427) ADAMTS17 (ENSSTOG00000004497) CERS3 (ENSSTOG00000004541) LINS1 (ENSSTOG00000004562) ASB7 (ENSSTOG00000024134) ALDH1A3 (ENSSTOG00000008968) Hystricomorpha ANCESTRAL SPECIES 35 ENSGT01100000263477.A.a.a ENSGT00910000144330 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a ENSGT00390000014153 Hystricomorpha_a ANCESTRAL SPECIES 40 ENSGT01100000263477.A.a.a ENSGT00910000144330 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a ENSGT00390000014153 Guinea pig MODERN SPECIES 10 MGAM (ENSCPOG00000011280) CLEC5A (ENSCPOG00000039585) PRSS37 (ENSCPOG00000004461) TAS2R4 (ENSCPOG00000026813) TAS2R3 (ENSCPOG00000007635) SSBP1 (ENSCPOG00000040289) ENSCPOG00000025291 DENND11 (ENSCPOG00000015452) AGK (ENSCPOG00000015447) ENSCPOG00000020150 MRPS33 (ENSCPOG00000038792) BRAF (ENSCPOG00000021487) NDUFB2 (ENSCPOG00000025368) ADCK2 (ENSCPOG00000031703) DENND2A (ENSCPOG00000030550) MKRN1 (ENSCPOG00000000948) ##22 RAB19 (ENSCPOG00000031937) ENSCPOG00000003740 KDM7A (ENSCPOG00000011219) PARP12 (ENSCPOG00000011210) TBXAS1 (ENSCPOG00000000064) HIPK2 (ENSCPOG00000007271) CLEC2L (ENSCPOG00000023856) LUC7L2 (ENSCPOG00000011934) FMC1 (ENSCPOG00000023251) UBN2 (ENSCPOG00000001664) TTC26 (ENSCPOG00000007713) ZC3HAV1 (ENSCPOG00000007709) ZC3HAV1L (ENSCPOG00000035436) KIAA1549 (ENSCPOG00000008014) TMEM213 (ENSCPOG00000040512) Hystricomorpha_b ANCESTRAL SPECIES 40 ENSGT00940000163043 ENSGT00940000161540 ENSGT01100000263477.A.a.a ENSGT00910000144330 ENSGT00940000161483 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a ENSGT00390000014153 Long-tailed chinchilla MODERN SPECIES 201 PRSS37 (ENSCLAG00000008886) SSBP1 (ENSCLAG00000009247) WEE2 (ENSCLAG00000009356) ENSCLAG00000001751 DENND11 (ENSCLAG00000001043) AGK (ENSCLAG00000001071) ENSCLAG00000001114 MRPS33 (ENSCLAG00000001134) ENSCLAG00000001167 ENSCLAG00000001297 ENSCLAG00000001414 NDUFB2 (ENSCLAG00000001447) ADCK2 (ENSCLAG00000001471) DENND2A (ENSCLAG00000001519) ENSCLAG00000001763 MKRN1 (ENSCLAG00000001783) ##22 SLC37A3 (ENSCLAG00000001923) RAB19 (ENSCLAG00000001959) KDM7A (ENSCLAG00000001992) PARP12 (ENSCLAG00000002012) TBXAS1 (ENSCLAG00000002208) HIPK2 (ENSCLAG00000002901) CLEC2L (ENSCLAG00000002955) LUC7L2 (ENSCLAG00000002030) FMC1 (ENSCLAG00000001016) UBN2 (ENSCLAG00000001065) TTC26 (ENSCLAG00000001256) ZC3HAV1 (ENSCLAG00000001337) ZC3HAV1L (ENSCLAG00000001371) KIAA1549 (ENSCLAG00000001385) TMEM213 (ENSCLAG00000001421) Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 311 ENSODEG00000000147 ENSODEG00000018519 ENSODEG00000000166 ##22 Degu MODERN SPECIES 156 ENSODEG00000003705 ENSODEG00000003766 ENSODEG00000003786 IQCJ (ENSODEG00000003870) ENSODEG00000019016 ENSODEG00000004394 IL12A (ENSODEG00000004507) C3orf80 (ENSODEG00000004587) IFT80 (ENSODEG00000004647) ENSODEG00000004792 SMC4 (ENSODEG00000004840) TRIM59 (ENSODEG00000005290) KPNA4 (ENSODEG00000005847) ENSODEG00000019258 PPM1L (ENSODEG00000006212) ENSODEG00000006229 ##22 B3GALNT1 (ENSODEG00000019291) NMD3 (ENSODEG00000006270) ENSODEG00000003551 ENSODEG00000003635 OTOL1 (ENSODEG00000003649) Degu MODERN SPECIES 96 ENSODEG00000007731 ENSODEG00000019567 SLC2A2 (ENSODEG00000008360) TNIK (ENSODEG00000007936) PLD1 (ENSODEG00000006929) ENSODEG00000019876 TMEM212 (ENSODEG00000010772) ENSODEG00000007581 GHSR (ENSODEG00000007538) TNFSF10 (ENSODEG00000007502) NCEH1 (ENSODEG00000006949) ENSODEG00000007260 ENSODEG00000019421 SPATA16 (ENSODEG00000007354) NLGN1 (ENSODEG00000006900) ENSODEG00000006853 ##22 ENSODEG00000008026 Degu MODERN SPECIES 68 ENSODEG00000014828 CLEC5A (ENSODEG00000013699) PRSS37 (ENSODEG00000013473) ENSODEG00000013367 ENSODEG00000013142 DENND11 (ENSODEG00000013048) AGK (ENSODEG00000015489) ENSODEG00000013547 ENSODEG00000013320 ENSODEG00000014878 ENSODEG00000012846 BRAF (ENSODEG00000013401) NDUFB2 (ENSODEG00000013607) ENSODEG00000014071 ENSODEG00000013390 ENSODEG00000013658 ##22 RAB19 (ENSODEG00000013764) ENSODEG00000014675 ENSODEG00000014445 ENSODEG00000014956 KDM7A (ENSODEG00000013688) PARP12 (ENSODEG00000013738) TBXAS1 (ENSODEG00000013240) HIPK2 (ENSODEG00000014040) CLEC2L (ENSODEG00000014470) LUC7L2 (ENSODEG00000014017) FMC1 (ENSODEG00000013388) UBN2 (ENSODEG00000015629) TTC26 (ENSODEG00000014319) ZC3HAV1 (ENSODEG00000013337) ZC3HAV1L (ENSODEG00000015469) Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 25 ENSHGLG00000040806 SPATA9 (ENSHGLG00000004797) ENSHGLG00000004921 GLRX (ENSHGLG00000005062) ENSHGLG00000005783 ENSHGLG00000006449 ENSHGLG00000042299 PCSK1 (ENSHGLG00000007524) ENSHGLG00000041240 ENSHGLG00000004596 ENSHGLG00000008968 ERAP1 (ENSHGLG00000007010) LNPEP (ENSHGLG00000014656) LIX1 (ENSHGLG00000009013) ENSHGLG00000009139 ENSHGLG00000034078 ##22 ENSHGLG00000042454 ##22 ENSHGLG00000047744 ENSHGLG00000045948 ENSHGLG00000012366 ENSHGLG00000034828 ENSHGLG00000040252 ENSHGLG00000012961 ENSHGLG00000032614 ENSHGLG00000017912 ENSHGLG00000036534 FAM174A (ENSHGLG00000011072) ST8SIA4 (ENSHGLG00000011228) ENSHGLG00000050019 ENSHGLG00000041123 ENSHGLG00000032541 Naked mole-rat female MODERN SPECIES 25 SLCO4C1 (ENSHGLG00000008917) ENSHGLG00000032541 ENSHGLG00000041123 ENSHGLG00000050019 ST8SIA4 (ENSHGLG00000011228) FAM174A (ENSHGLG00000011072) ENSHGLG00000036534 ENSHGLG00000017912 ENSHGLG00000032614 ENSHGLG00000012961 ENSHGLG00000040252 ENSHGLG00000034828 ENSHGLG00000012366 ENSHGLG00000045948 ENSHGLG00000047744 ENSHGLG00000042454 ##22 ENSHGLG00000034078 ##22 ENSHGLG00000009139 LIX1 (ENSHGLG00000009013) LNPEP (ENSHGLG00000014656) ERAP1 (ENSHGLG00000007010) ENSHGLG00000008968 ENSHGLG00000004596 ENSHGLG00000041240 PCSK1 (ENSHGLG00000007524) ENSHGLG00000042299 ENSHGLG00000006449 ENSHGLG00000005783 GLRX (ENSHGLG00000005062) ENSHGLG00000004921 SPATA9 (ENSHGLG00000004797) Naked mole-rat female MODERN SPECIES 17 PRSS37 (ENSHGLG00000006169) TAS2R4 (ENSHGLG00000039087) ENSHGLG00000009362 ENSHGLG00000011701 DENND11 (ENSHGLG00000010322) AGK (ENSHGLG00000046237) TMEM178B (ENSHGLG00000043245) ENSHGLG00000040990 ENSHGLG00000049810 BRAF (ENSHGLG00000014168) ENSHGLG00000017933 ADCK2 (ENSHGLG00000037504) DENND2A (ENSHGLG00000014310) ENSHGLG00000043500 ENSHGLG00000040747 ENSHGLG00000044578 ##22 RAB19 (ENSHGLG00000010948) ENSHGLG00000009494 ENSHGLG00000039773 ENSHGLG00000021196 KDM7A (ENSHGLG00000012198) PARP12 (ENSHGLG00000018555) ENSHGLG00000034540 ENSHGLG00000040227 TBXAS1 (ENSHGLG00000014596) HIPK2 (ENSHGLG00000006604) CLEC2L (ENSHGLG00000036583) LUC7L2 (ENSHGLG00000004646) FMC1 (ENSHGLG00000050501) UBN2 (ENSHGLG00000005428) ENSHGLG00000047005 Naked mole-rat female MODERN SPECIES 9 ENSHGLG00000018510 DSC2 (ENSHGLG00000018208) DSC1 (ENSHGLG00000007182) DSG1 (ENSHGLG00000003726) DSG4 (ENSHGLG00000007440) DSG3 (ENSHGLG00000033832) DSG2 (ENSHGLG00000018540) TTR (ENSHGLG00000032203) ENSHGLG00000048860 B4GALT6 (ENSHGLG00000049627) ENSHGLG00000006445 ENSHGLG00000035795 ENSHGLG00000007122 ENSHGLG00000003673 ENSHGLG00000034153 ENSHGLG00000016102 ##22 ENSHGLG00000020349 KLHL14 (ENSHGLG00000003622) ENSHGLG00000046815 ASXL3 (ENSHGLG00000046257) ENSHGLG00000050886 ENSHGLG00000037507 DTNA (ENSHGLG00000002553) MAPRE2 (ENSHGLG00000001850) ZNF397 (ENSHGLG00000042260) ENSHGLG00000049207 ZSCAN30 (ENSHGLG00000046796) ENSHGLG00000039936 ENSHGLG00000046914 ZNF24 (ENSHGLG00000019564) ENSHGLG00000017772 Rodentia_B ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Kangaroo rat MODERN SPECIES 375 ENSDORG00000007422 ENSDORG00000007415 Clec5a (ENSDORG00000000839) Prss37 (ENSDORG00000015166) Ssbp1 (ENSDORG00000015161) Wee2 (ENSDORG00000015156) Dennd11 (ENSDORG00000003736) Agk (ENSDORG00000003733) ENSDORG00000026381 Mrps33 (ENSDORG00000007444) ENSDORG00000024624 Braf (ENSDORG00000009732) ENSDORG00000009731 Adck2 (ENSDORG00000030048) Dennd2a (ENSDORG00000016236) Mkrn1 (ENSDORG00000003480) ##22 Rab19 (ENSDORG00000006983) Slc37a3 (ENSDORG00000013791) Kdm7a (ENSDORG00000012871) Parp12 (ENSDORG00000009525) Tbxas1 (ENSDORG00000009523) Hipk2 (ENSDORG00000000634) Clec2l (ENSDORG00000028904) Klrg2 (ENSDORG00000012027) Luc7l2 (ENSDORG00000029146) Fmc1 (ENSDORG00000010675) Ubn2 (ENSDORG00000001602) Ttc26 (ENSDORG00000004809) Zc3hav1 (ENSDORG00000026955) Zc3hav1l (ENSDORG00000013237) ENSDORG00000026439 Myomorpha ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 158 Atn1 (ENSJJAG00000019576) Grcc10 (ENSJJAG00000018958) ENSJJAG00000018809 ENSJJAG00000018699 Emg1 (ENSJJAG00000018448) Lpcat3 (ENSJJAG00000018031) ENSJJAG00000016716 ENSJJAG00000015111 ENSJJAG00000014098 ENSJJAG00000013518 Clstn3 (ENSJJAG00000013207) ENSJJAG00000010801 Cd163 (ENSJJAG00000008702) Clec4e (ENSJJAG00000001281) Clec4d (ENSJJAG00000000318) ENSJJAG00000000075 ##22 Nanog (ENSJJAG00000013576) Slc2a3 (ENSJJAG00000012236) Foxj2 (ENSJJAG00000010589) ENSJJAG00000010195 ENSJJAG00000006274 ENSJJAG00000013693 Lesser Egyptian jerboa MODERN SPECIES 81 ENSJJAG00000007203 ENSJJAG00000013742 Prss59 (ENSJJAG00000020845) Moxd2 (ENSJJAG00000011768) ENSJJAG00000017582 ENSJJAG00000013568 Clec5a (ENSJJAG00000017338) Ssbp1 (ENSJJAG00000016282) ENSJJAG00000001577 Wee2 (ENSJJAG00000022003) ENSJJAG00000014217 ENSJJAG00000016723 Braf (ENSJJAG00000020559) ENSJJAG00000000905 Dennd2a (ENSJJAG00000017109) ENSJJAG00000010761 ##22 Rab19 (ENSJJAG00000015955) Slc37a3 (ENSJJAG00000019794) Parp12 (ENSJJAG00000019161) Tbxas1 (ENSJJAG00000020954) Hipk2 (ENSJJAG00000019253) Luc7l2 (ENSJJAG00000011456) Fmc1 (ENSJJAG00000017491) Ttc26 (ENSJJAG00000017971) Zc3hav1 (ENSJJAG00000016894) Svopl (ENSJJAG00000016350) ENSJJAG00000021534 ENSJJAG00000022841 Akr1d1 (ENSJJAG00000023178) Creb3l2 (ENSJJAG00000021391) Dgki (ENSJJAG00000015713) Muroidea ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Murinae ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Mus ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Mus_A ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Mus_B ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Mus_C ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Steppe mouse MODERN SPECIES 3339 Cxcl5 (ENSMSIG00000018306) Rassf6 (ENSMSIG00000018101) Albfm1 (ENSMSIG00000018054) Afm (ENSMSIG00000018020) Afp (ENSMSIG00000017978) Alb (ENSMSIG00000017929) ENSMSIG00000017924 ENSMSIG00000017919 Ankrd17 (ENSMSIG00000017775) Cox18 (ENSMSIG00000017749) ENSMSIG00000017742 ENSMSIG00000017729 Adamts3 (ENSMSIG00000017592) Npffr2 (ENSMSIG00000017576) Gc (ENSMSIG00000017539) ENSMSIG00000017515 ##22 Slc4a4 (ENSMSIG00000017372) Dck (ENSMSIG00000017336) ENSMSIG00000017328 Mob1b (ENSMSIG00000017281) ENSMSIG00000017215 Rufy3 (ENSMSIG00000017109) Lagomorpha ANCESTRAL SPECIES 293 ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163139 Pika MODERN SPECIES 1211 DENND2A (ENSOPRG00000010372) MKRN1 (ENSOPRG00000010353) ##22 RAB19 (ENSOPRG00000010348) ENSOPRG00000010320 Rabbit MODERN SPECIES 567 ENSOCUG00000004424 BRAF (ENSOCUG00000005487) NDUFB2 (ENSOCUG00000023842) ADCK2 (ENSOCUG00000012813) DENND2A (ENSOCUG00000014993) MKRN1 (ENSOCUG00000010180) ##22 RAB19 (ENSOCUG00000004389) ENSOCUG00000008847 Primates ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Strepsirrhini ANCESTRAL SPECIES 9 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Lemuriformes DUPLICATION Lemuriformes ANCESTRAL SPECIES 4 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.m ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b.ib ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Mouse lemur MODERN SPECIES 2 OR9A1P (ENSMICG00000047958) PRSS37 (ENSMICG00000043681) TAS2R5 (ENSMICG00000002588) ENSMICG00000031317 WEE2 (ENSMICG00000045942) DENND11 (ENSMICG00000002570) ENSMICG00000002561 TMEM178B (ENSMICG00000027101) ENSMICG00000036507 ENSMICG00000028298 MRPS33 (ENSMICG00000029049) BRAF (ENSMICG00000005096) ENSMICG00000005092 ADCK2 (ENSMICG00000005086) DENND2A (ENSMICG00000002120) MKRN1 (ENSMICG00000002114) ##22 RAB19 (ENSMICG00000006614) SLC37A3 (ENSMICG00000015980) KDM7A (ENSMICG00000003175) PARP12 (ENSMICG00000003163) TBXAS1 (ENSMICG00000003155) HIPK2 (ENSMICG00000003143) CLEC2L (ENSMICG00000036417) KLRG2 (ENSMICG00000028565) LUC7L2 (ENSMICG00000003133) UBN2 (ENSMICG00000003118) ENSMICG00000032066 ENSMICG00000029074 TTC26 (ENSMICG00000003109) ZC3HAV1 (ENSMICG00000003101) ZC3HAV1L (ENSMICG00000037636) Lemuriformes_a ANCESTRAL SPECIES 51 ENSGT00940000163413 ENSGT00940000164718 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.m ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.b.ib ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Coquerels sifaka MODERN SPECIES 430 MGAM (ENSPCOG00000014465) ENSPCOG00000027867 PRSS37 (ENSPCOG00000020043) SSBP1 (ENSPCOG00000021009) WEE2 (ENSPCOG00000016620) DENND11 (ENSPCOG00000005094) AGK (ENSPCOG00000025807) TMEM178B (ENSPCOG00000020472) ENSPCOG00000015683 BRAF (ENSPCOG00000024467) NDUFB2 (ENSPCOG00000008454) ENSPCOG00000018417 ADCK2 (ENSPCOG00000019938) DENND2A (ENSPCOG00000012423) ENSPCOG00000023686 ENSPCOG00000002890 ##22 RAB19 (ENSPCOG00000019113) SLC37A3 (ENSPCOG00000014061) ENSPCOG00000016270 KDM7A (ENSPCOG00000027250) PARP12 (ENSPCOG00000016258) TBXAS1 (ENSPCOG00000027330) HIPK2 (ENSPCOG00000011246) CLEC2L (ENSPCOG00000017143) KLRG2 (ENSPCOG00000020022) LUC7L2 (ENSPCOG00000006775) FMC1 (ENSPCOG00000009131) UBN2 (ENSPCOG00000013100) Greater bamboo lemur MODERN SPECIES 70 TAS2R4 (ENSPSMG00000005349) TAS2R3 (ENSPSMG00000005351) SSBP1 (ENSPSMG00000005385) WEE2 (ENSPSMG00000005416) DENND11 (ENSPSMG00000005424) AGK (ENSPSMG00000005473) TMEM178B (ENSPSMG00000005625) ENSPSMG00000005629 ENSPSMG00000005632 BRAF (ENSPSMG00000005759) NDUFB2 (ENSPSMG00000005977) ENSPSMG00000006007 ADCK2 (ENSPSMG00000006015) DENND2A (ENSPSMG00000006080) ENSPSMG00000006137 ENSPSMG00000006161 ##22 RAB19 (ENSPSMG00000006175) SLC37A3 (ENSPSMG00000006206) KDM7A (ENSPSMG00000006220) PARP12 (ENSPSMG00000006242) TBXAS1 (ENSPSMG00000006306) Lemuriformes ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b.jb ##22 Lemuriformes_a ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b.jb ##22 Coquerels sifaka MODERN SPECIES 862 ENSPCOG00000016419 LRIG3 (ENSPCOG00000015743) ENSPCOG00000027137 ##22 ENSPCOG00000027882 ENSPCOG00000013959 ENSPCOG00000028199 ENSPCOG00000022346 ENSPCOG00000027584 USP15 (ENSPCOG00000017465) MON2 (ENSPCOG00000025766) PPM1H (ENSPCOG00000015943) AVPR1A (ENSPCOG00000013252) RXYLT1 (ENSPCOG00000028035) SRGAP1 (ENSPCOG00000022103) KICS2 (ENSPCOG00000014498) C12orf56 (ENSPCOG00000023353) XPOT (ENSPCOG00000028383) TBK1 (ENSPCOG00000020253) Greater bamboo lemur MODERN SPECIES 205 ENSPSMG00000019616 ##22 TRIM69 (ENSPSMG00000019643) TERB2 (ENSPSMG00000019656) SORD (ENSPSMG00000019696) DUOX2 (ENSPSMG00000019904) DUOXA2 (ENSPSMG00000019968) DUOXA1 (ENSPSMG00000019986) DUOX1 (ENSPSMG00000020284) SHF (ENSPSMG00000020407) SLC28A2 (ENSPSMG00000020416) GATM (ENSPSMG00000020436) SPATA5L1 (ENSPSMG00000020446) C15orf48 (ENSPSMG00000020452) SLC30A4 (ENSPSMG00000020465) BLOC1S6 (ENSPSMG00000020483) SQOR (ENSPSMG00000020526) Haplorrhini ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Tarsier MODERN SPECIES 983 ZMIZ1 (ENSTSYG00000012987) ENSTSYG00000030483 ENSTSYG00000035065 ##22 ZCCHC24 (ENSTSYG00000001145) Simiiformes ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Platyrrhini ANCESTRAL SPECIES 9 ENSGT00940000155773.b ENSGT00940000153988.A ENSGT00940000161094 ENSGT00940000160160 ENSGT00940000154191.i.a.s ENSGT00940000158842 ENSGT00530000063734.a ENSGT01090000260082.d.a.a.a.b ENSGT00940000159241 ENSGT00390000001718.i ENSGT00950000183038.a.b.b.b ENSGT01080000257365.b.a.a.b.a ENSGT00390000015797.d ENSGT00940000158904 ENSGT00390000010523.c.b ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00390000009987 ENSGT00930000150980.a ENSGT00940000155515.a.b.b ENSGT00620000089259 ENSGT00940000157055 ENSGT00950000182837.b.b ENSGT00940000154714.v ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000154530.r.b.b ENSGT00940000157541 ENSGT00390000015050 Cebidae ANCESTRAL SPECIES 11 ENSGT00940000155773.b ENSGT00940000153988.A ENSGT00940000161094 ENSGT00940000160160 ENSGT00940000154191.i.a.s ENSGT00940000158842 ENSGT00530000063734.a ENSGT01090000260082.d.a.a.a.b ENSGT00940000159241 ENSGT00390000001718.i ENSGT00950000183038.a.b.b.b ENSGT01080000257365.b.a.a.b.a ENSGT00390000015797.d ENSGT00940000158904 ENSGT00390000010523.c.b ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00390000009987 ENSGT00930000150980.a ENSGT00940000155515.a.b.b ENSGT00620000089259 ENSGT00940000157055 ENSGT00950000182837.b.b ENSGT00940000154714.v ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B Cebidae_a ANCESTRAL SPECIES 27 ENSGT00940000153988.A ENSGT00940000161094 ENSGT00940000160160 ENSGT00940000154191.i.a.s ENSGT00940000158842 ENSGT00530000063734.a ENSGT01090000260082.d.a.a.a.b ENSGT00940000159241 ENSGT00940000154966.l ENSGT00390000001718.i ENSGT00950000183038.a.b.b.b ENSGT01080000257365.b.a.a.b.a ENSGT00390000015797.d ENSGT00940000158904 ENSGT00390000010523.c.b ENSGT00950000183077.a.a.a.a.b ##22 ENSGT00390000009987 ENSGT00930000150980.a ENSGT00940000155515.a.b.b ENSGT00620000089259 ENSGT00940000157055 ENSGT00950000182837.b.b ENSGT00940000154714.v ENSGT00940000154533.b.d ENSGT00390000012204 ENSGT00940000157201 ENSGT00530000063686.a.a ENSGT00530000063686.a.b ENSGT00940000157541 ENSGT00390000015050 ENSGT00390000000220.B Capuchin MODERN SPECIES 27 KCNJ3 (ENSCCAG00000030138) ENSCCAG00000025266 GALNT13 (ENSCCAG00000024645) ENSCCAG00000019999 RPRM (ENSCCAG00000006984) ENSCCAG00000019893 ##22 ARL6IP6 (ENSCCAG00000024457) PRPF40A (ENSCCAG00000034856) FMNL2 (ENSCCAG00000028051) ENSCCAG00000020790 ENSCCAG00000007786 STAM2 (ENSCCAG00000030900) CACNB4 (ENSCCAG00000036673) ARL5A (ENSCCAG00000023321) NEB (ENSCCAG00000026566) RIF1 (ENSCCAG00000024760) TNFAIP6 (ENSCCAG00000022288) NMI (ENSCCAG00000022500) RBM43 (ENSCCAG00000020911) RND3 (ENSCCAG00000030386) MMADHC (ENSCCAG00000036477) Mas night monkey MODERN SPECIES 1325 ENSANAG00000016076 ENSANAG00000031523 ##22 ARL6IP6 (ENSANAG00000034126) PRPF40A (ENSANAG00000023828) FMNL2 (ENSANAG00000029876) ENSANAG00000024796 ENSANAG00000026006 STAM2 (ENSANAG00000000022) CACNB4 (ENSANAG00000035973) ARL5A (ENSANAG00000027698) NEB (ENSANAG00000025115) RIF1 (ENSANAG00000024840) TNFAIP6 (ENSANAG00000024087) NMI (ENSANAG00000034417) RBM43 (ENSANAG00000032206) ENSANAG00000022645 RND3 (ENSANAG00000033420) Catarrhini ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Rhinopithecus ANCESTRAL SPECIES 675 ENSGT00940000157538 ENSGT00730000111039.C ENSGT00500000044938 ENSGT00920000149095.b ENSGT00950000183077.a.a.a.a.b ##22 Golden snub-nosed monkey MODERN SPECIES 1603 TMTC3 (ENSRROG00000027189) CEP290 (ENSRROG00000016571) C12orf29 (ENSRROG00000033487) C12orf50 (ENSRROG00000034682) ENSRROG00000041307 ##22 Black snub-nosed monkey MODERN SPECIES 567 TMTC3 (ENSRBIG00000041322) CEP290 (ENSRBIG00000032842) C12orf29 (ENSRBIG00000003983) C12orf50 (ENSRBIG00000031820) ENSRBIG00000031248 ##22 ENSRBIG00000043577 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Macaca ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Macaca_a ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a.b ##22 Rhesus MODERN SPECIES 113 ENSMMUG00000060002 ##22 Marsupialia ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.a ##22 Opossum MODERN SPECIES 350 ENSMODG00000022796 ##22 KLHL4 (ENSMODG00000021177) ENSMODG00000022797 ENSMODG00000022798 Theria ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.b ##22 Eutheria ANCESTRAL SPECIES 8 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00950000185579 ENSGT00980000199886 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 Boreoeutheria ANCESTRAL SPECIES 3 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00950000185579 ENSGT00940000155024 ENSGT00980000199886 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000155052.e.b.b ENSGT00940000164524 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000169724 ENSGT00940000159067 Laurasiatheria ANCESTRAL SPECIES 3 ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00950000185579 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000169724 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.b ##22 Hedgehog MODERN SPECIES 7271 MKRN3 (ENSEEUG00000008117) ##22 Common shrew MODERN SPECIES 9201 ENSSARG00000002938 ##22 Laurasiatheria_a ANCESTRAL SPECIES 2 ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00950000185579 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000155052.e.b.b ENSGT00940000164524 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000169724 ENSGT00940000159067 Artiodactyla ANCESTRAL SPECIES 3 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00980000199886 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000155052.e.b.b ENSGT00940000164524 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f Artiodactyla_a ANCESTRAL SPECIES 2 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00980000199886 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000155052.e.b.b ENSGT00940000164524 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f Artiodactyla_b ANCESTRAL SPECIES 2 ENSGT00940000159270 ENSGT00550000074827 ENSGT00390000011314 ENSGT00940000157796 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000160977 ENSGT00940000157737 ENSGT00940000159819 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000164524 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT00390000015688 ENSGT01050000244857.C.a.a ENSGT00940000160363 ENSGT00940000158815 ENSGT00900000143686 Cetacea ANCESTRAL SPECIES 2 ENSGT00550000074827 ENSGT00390000011314 ENSGT00940000157796 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000160977 ENSGT00940000157737 ENSGT00940000159819 ENSGT00940000158999 ENSGT00390000006350.m.a.c.b.a.a ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320.ab.a ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f.a ENSGT00940000155607 ENSGT00390000015688 ENSGT01050000244857.C.a.a ENSGT00940000160363 ENSGT00940000158815 ENSGT00940000158068 ENSGT00390000001790 Odontoceti ANCESTRAL SPECIES 2 ENSGT00550000074827 ENSGT00390000011314 ENSGT00940000157796 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000160977 ENSGT00940000157737 ENSGT00940000159819 ENSGT00940000158999 ENSGT00390000006350.m.a.c.b.a.a ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320.ab.a.a ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f.a ENSGT00940000155607 ENSGT00390000015688 ENSGT01050000244857.C.a.a ENSGT00940000160363 ENSGT00940000158815 ENSGT00940000158068 ENSGT00390000001790 Sperm whale MODERN SPECIES 2 PSMA4 (ENSPCTG00005020235) HYKK (ENSPCTG00005020316) IREB2 (ENSPCTG00005020368) ENSPCTG00005020520 ENSPCTG00005020528 DNAJA4 (ENSPCTG00005020540) ACSBG1 (ENSPCTG00005020568) IDH3A (ENSPCTG00005020703) CIB2 (ENSPCTG00005020750) SH2D7 (ENSPCTG00005020794) TBC1D2B (ENSPCTG00005020842) ADAMTS7 (ENSPCTG00005020874) OTUD7A (ENSPCTG00005020891) ENSPCTG00005020947 CHRNA7 (ENSPCTG00005008463) ENSPCTG00005008735 ##22 MAGEL2 (ENSPCTG00005008775) NDN (ENSPCTG00005008795) SNURF (ENSPCTG00005008825) SNRPN (ENSPCTG00005008845) UBE3A (ENSPCTG00005009396) ATP10A (ENSPCTG00005009469) GABRB3 (ENSPCTG00005009807) GABRA5 (ENSPCTG00005010049) GABRG3 (ENSPCTG00005010080) SELENOS (ENSPCTG00005010343) CHSY1 (ENSPCTG00005010429) ENSPCTG00005010476 LRRK1 (ENSPCTG00005010536) ALDH1A3 (ENSPCTG00005010651) ASB7 (ENSPCTG00005010877) Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00550000074827 ENSGT00390000011314 ENSGT00940000157796 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000160977 ENSGT00940000157737 ENSGT00940000159819 ENSGT00940000158999 ENSGT00390000006350.m.a.c.b.a.a ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320.ab.a.a ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f.a ENSGT00940000155607 ENSGT00390000015688 ENSGT01050000244857.C.a.a ENSGT00940000160363 ENSGT00940000158815 ENSGT00940000158068 ENSGT00390000001790 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00550000074827 ENSGT00390000011314 ENSGT00940000157796 ENSGT00940000159422 ENSGT00940000153533.a ENSGT00940000155707 ENSGT00940000160380 ENSGT00950000182989.A ENSGT00940000157327 ENSGT00940000160977 ENSGT00940000157737 ENSGT00940000159819 ENSGT00940000158999 ENSGT00390000006350.m.a.c.b.a.a ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320.ab.a.a ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f.a ENSGT00940000155607 ENSGT00390000015688 ENSGT01050000244857.C.a.a ENSGT00940000160363 ENSGT00940000158815 ENSGT00940000158068 ENSGT00390000001790 Monodontidae ANCESTRAL SPECIES 43 ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 Narwhal MODERN SPECIES 308 CERS3 (ENSMMNG00015011108) LINS1 (ENSMMNG00015011141) ASB7 (ENSMMNG00015011178) ALDH1A3 (ENSMMNG00015011205) LRRK1 (ENSMMNG00015011239) CHSY1 (ENSMMNG00015011277) SELENOS (ENSMMNG00015011300) GABRG3 (ENSMMNG00015011324) ENSMMNG00015011346 GABRB3 (ENSMMNG00015011375) ENSMMNG00015011410 ENSMMNG00015011428 UBE3A (ENSMMNG00015011456) SNRPN (ENSMMNG00015011647) ENSMMNG00015011671 ENSMMNG00015011691 ##22 ENSMMNG00015011700 NDN (ENSMMNG00015011707) ENSMMNG00015011717 ENSMMNG00015011744 DMXL2 (ENSMMNG00015011788) SCG3 (ENSMMNG00015011814) LYSMD2 (ENSMMNG00015011833) TMOD2 (ENSMMNG00015011849) TMOD3 (ENSMMNG00015011880) ENSMMNG00015011900 LEO1 (ENSMMNG00015011924) ENSMMNG00015011949 GNB5 (ENSMMNG00015012005) MYO5C (ENSMMNG00015012065) MYO5A (ENSMMNG00015012116) Pecora ANCESTRAL SPECIES 18 ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000164524 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT00390000015688 ENSGT01050000244857.C.a.a ENSGT01100000263481.n.a.b.b ENSGT00390000018141.i.a.b.b.b.b ENSGT00940000160363 Percora_a ANCESTRAL SPECIES 20 ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000164524 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT00390000015688 ENSGT01050000244857.C.a.a ENSGT01100000263481.n.a.b.b ENSGT00390000018141.i.a.b.b.b.b ENSGT00940000160363 Bovidae ANCESTRAL SPECIES 20 ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320.y ENSGT00940000158222 ENSGT00940000164524 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT00390000015688 ENSGT01050000244857.C.a.a ENSGT01100000263481.n.a.b.b ENSGT00390000018141.i.a.b.b.b.b ENSGT00940000160363 Bovinae ANCESTRAL SPECIES 45 ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320.y ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT00390000009588.pb.a.a.b ENSGT00390000015688 ENSGT01050000244857.C.a.a ENSGT00940000160363 ENSGT00940000158815 ENSGT00900000143686 Bos ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.b ##22 Bos_a ANCESTRAL SPECIES 161 ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 Domestic yak MODERN SPECIES 8 ENSBGRG00000008247 ENSBGRG00000008342 ENSBGRG00000008642 IGHM (ENSBGRG00000008676) ENSBGRG00000008801 ENSBGRG00000008868 ENSBGRG00000008925 ENSBGRG00000008984 ENSBGRG00000009122 ENSBGRG00000009174 ENSBGRG00000009207 ENSBGRG00000009260 ENSBGRG00000009310 ENSBGRG00000009395 ENSBGRG00000009423 MKRN3 (ENSBGRG00000009458) ##22 MAGEL2 (ENSBGRG00000009479) NDN (ENSBGRG00000009505) Bos_b ANCESTRAL SPECIES 44 ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320.y ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT00390000009588.pb.a.a.b ENSGT00390000015688 ENSGT01050000244857.C.a.a ENSGT01100000263481.n.a.b.b.a.b.b.a.a.a.a.a ENSGT00940000160363 ENSGT00940000158815 Hybrid Bos Indicus MODERN SPECIES 13 ENSBIXG00005025915 ENSBIXG00005025731 MKRN3 (ENSBIXG00005025714) ##22 MAGEL2 (ENSBIXG00005025699) NDN (ENSBIXG00005025694) SNRPN (ENSBIXG00005025666) ENSBIXG00005025579 ENSBIXG00005004309 UBE3A (ENSBIXG00005025325) ATP10A (ENSBIXG00005004289) ENSBIXG00005025106 GABRB3 (ENSBIXG00005025037) ENSBIXG00005024946 GABRA5 (ENSBIXG00005024931) GABRG3 (ENSBIXG00005004245) ENSBIXG00005024736 SELENOS (ENSBIXG00005024692) CHSY1 (ENSBIXG00005024627) Cow MODERN SPECIES 13 ENSBTAG00000051751 ENSBTAG00000048049 ENSBTAG00000001213 ENSBTAG00000046076 ENSBTAG00000054702 ENSBTAG00000048048 ENSBTAG00000053508 ENSBTAG00000024041 ENSBTAG00000051010 ENSBTAG00000046161 ENSBTAG00000051425 ENSBTAG00000048268 ENSBTAG00000054133 ENSBTAG00000050088 ENSBTAG00000053635 MKRN3 (ENSBTAG00000053916) ##22 MAGEL2 (ENSBTAG00000045998) NDN (ENSBTAG00000002186) SNRPN (ENSBTAG00000008251) UBE3A (ENSBTAG00000002487) ATP10A (ENSBTAG00000027081) GABRB3 (ENSBTAG00000013422) GABRA5 (ENSBTAG00000003392) ENSBTAG00000051536 ENSBTAG00000035184 GABRG3 (ENSBTAG00000052298) ENSBTAG00000034398 SELENOS (ENSBTAG00000000640) CHSY1 (ENSBTAG00000007357) LRRK1 (ENSBTAG00000001567) ALDH1A3 (ENSBTAG00000009125) Caprinae ANCESTRAL SPECIES 22 ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320.z ENSGT00940000158222 ENSGT00390000009320.y ENSGT00940000164524 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT00390000015688.a ENSGT01050000244857.C.a.a ENSGT00940000160363 ENSGT00940000158815 Goat MODERN SPECIES 13 MKRN3 (ENSCHIG00000020847) ##22 MAGEL2 (ENSCHIG00000007827) NDN (ENSCHIG00000008761) ENSCHIG00000009017 ENSCHIG00000022019 SNRPN (ENSCHIG00000017477) ENSCHIG00000008148 UBE3A (ENSCHIG00000017576) ENSCHIG00000017789 ATP10A (ENSCHIG00000007182) ENSCHIG00000022386 GABRB3 (ENSCHIG00000021468) GABRA5 (ENSCHIG00000023746) ENSCHIG00000014564 GABRG3 (ENSCHIG00000024578) ENSCHIG00000023151 Siberian musk deer MODERN SPECIES 75 ENSMMSG00000012127 ENSMMSG00000012143 MKRN3 (ENSMMSG00000012160) ##22 MAGEL2 (ENSMMSG00000012179) NDN (ENSMMSG00000012189) SNURF (ENSMMSG00000012199) SNRPN (ENSMMSG00000012218) Yarkand deer MODERN SPECIES 4 MKRN3 (ENSCHYG00000005104) ##22 MAGEL2 (ENSCHYG00000005117) NDN (ENSCHYG00000005128) SNURF (ENSCHYG00000005159) SNRPN (ENSCHYG00000005196) UBE3A (ENSCHYG00000005478) ENSCHYG00000005530 ENSCHYG00000005590 ENSCHYG00000005608 GABRB3 (ENSCHYG00000005619) ENSCHYG00000005633 GABRA5 (ENSCHYG00000005654) GABRG3 (ENSCHYG00000005703) SELENOS (ENSCHYG00000005762) CHSY1 (ENSCHYG00000005857) LRRK1 (ENSCHYG00000005930) Camelidae ANCESTRAL SPECIES 21 ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00980000199886 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 Alpaca MODERN SPECIES 5587 MKRN3 (ENSVPAG00000003919) ##22 Arabian camel MODERN SPECIES 19 PCSK6 (ENSCDRG00005017712) TM2D3 (ENSCDRG00005017633) TARS3 (ENSCDRG00005005662) TJP1 (ENSCDRG00005005213) ENTREP2 (ENSCDRG00005005159) APBA2 (ENSCDRG00005004934) MCEE (ENSCDRG00005004885) MPHOSPH10 (ENSCDRG00005004863) FAN1 (ENSCDRG00005004716) MTMR10 (ENSCDRG00005004648) TRPM1 (ENSCDRG00005004213) ENSCDRG00005004149 ENSCDRG00005004122 OTUD7A (ENSCDRG00005004081) CHRNA7 (ENSCDRG00005003957) MKRN3 (ENSCDRG00005003937) ##22 MAGEL2 (ENSCDRG00005003920) NDN (ENSCDRG00005003906) ENSCDRG00005003879 ENSCDRG00005003861 ENSCDRG00005003847 SNRPN (ENSCDRG00005003687) UBE3A (ENSCDRG00005021739) GABRB3 (ENSCDRG00005021715) GABRA5 (ENSCDRG00005021710) GABRG3 (ENSCDRG00005021707) Suina ANCESTRAL SPECIES 12 ENSGT00940000153289.b ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00950000185118 ENSGT00940000163006 ENSGT00940000163084 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT00390000015688 ENSGT01050000244857.C.a.a ENSGT00940000160363 ENSGT00940000158815 ENSGT00900000143686 ENSGT00940000158068 ENSGT00390000001790 Pig MODERN SPECIES PCSK6 (ENSSSCG00000005785) TM2D3 (ENSSSCG00000005782) TARS3 (ENSSSCG00000005781) ENSSSCG00000033540 TJP1 (ENSSSCG00000004854) ENTREP2 (ENSSSCG00000004850) APBA2 (ENSSSCG00000004849) MCEE (ENSSSCG00000035696) MPHOSPH10 (ENSSSCG00000004847) FAN1 (ENSSSCG00000004845) MTMR10 (ENSSSCG00000004844) TRPM1 (ENSSSCG00000004843) KLF13 (ENSSSCG00000026006) OTUD7A (ENSSSCG00000004840) CHRNA7 (ENSSSCG00000004839) ENSSSCG00000004836 ##22 NDN (ENSSSCG00000004834) UBE3A (ENSSSCG00000004832) ENSSSCG00000054906 ENSSSCG00000004830 ENSSSCG00000043519 GABRB3 (ENSSSCG00000038547) GABRA5 (ENSSSCG00000004827) GABRG3 (ENSSSCG00000035584) SELENOS (ENSSSCG00000004826) CHSY1 (ENSSSCG00000004825) LRRK1 (ENSSSCG00000004823) ALDH1A3 (ENSSSCG00000004822) ENSSSCG00000038358 ASB7 (ENSSSCG00000004821) LINS1 (ENSSSCG00000004820) Laurasiatheria_b ANCESTRAL SPECIES 3 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00950000185579 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000164524 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000169724 ENSGT00940000159067 ENSGT00940000155651 Carnivora ANCESTRAL SPECIES ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00950000185579 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000164524 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b Caniformia ANCESTRAL SPECIES 12 ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00950000185579 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000164524 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b Caniformia_b ANCESTRAL SPECIES 15 ENSGT00940000153289.b ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000164524 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000156234.e.a ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 Ursidae ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.b ##22 Giant Panda MODERN SPECIES 19 ENSAMEG00000003123 ENSAMEG00000015319 ENSAMEG00000015316 ENSAMEG00000015370 ENSAMEG00000015372 ENSAMEG00000015396 ENSAMEG00000015406 TRPM1 (ENSAMEG00000015437) ENSAMEG00000019549 OTUD7A (ENSAMEG00000015494) ENSAMEG00000026159 ENSAMEG00000028113 ENSAMEG00000019852 ENSAMEG00000023575 ENSAMEG00000024276 ENSAMEG00000012505 ##22 ENSAMEG00000018975 NDN (ENSAMEG00000012513) ENSAMEG00000007033 SNRPN (ENSAMEG00000007034) ENSAMEG00000024500 UBE3A (ENSAMEG00000007071) ATP10A (ENSAMEG00000005927) GABRB3 (ENSAMEG00000029320) GABRA5 (ENSAMEG00000005642) GABRG3 (ENSAMEG00000008228) OCA2 (ENSAMEG00000011064) ENSAMEG00000003194 ENSAMEG00000013833 ENSAMEG00000013824 ENSAMEG00000013758 Mustelinae ANCESTRAL SPECIES 36 ENSGT00940000153289.b ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 Ferret MODERN SPECIES 470 CHRNA7 (ENSMPUG00000014632) MKRN3 (ENSMPUG00000014634) ##22 MAGEL2 (ENSMPUG00000020090) NDN (ENSMPUG00000020091) SNRPN (ENSMPUG00000014638) Canidae ANCESTRAL SPECIES 21 ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00950000185579 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Canis_lupus ANCESTRAL SPECIES 23 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153288.a.b.a.a ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00950000185579 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00390000013931.a.a.a.a.a ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320.eb.b ENSGT00940000158222 ENSGT00940000153341.b.p.a.b.b ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b Dingo MODERN SPECIES 138 ENSCAFG00020023827 APBA2 (ENSCAFG00020023828) ENSCAFG00020023833 MCEE (ENSCAFG00020023834) MPHOSPH10 (ENSCAFG00020023836) FAN1 (ENSCAFG00020023840) MTMR10 (ENSCAFG00020023862) ENSCAFG00020023965 TRPM1 (ENSCAFG00020023986) ENSCAFG00020024007 ENSCAFG00020024010 KLF13 (ENSCAFG00020024015) OTUD7A (ENSCAFG00020024024) ENSCAFG00020024032 CHRNA7 (ENSCAFG00020024042) MKRN3 (ENSCAFG00020024058) ##22 MAGEL2 (ENSCAFG00020024064) NDN (ENSCAFG00020024065) ENSCAFG00020024067 ENSCAFG00020024072 SNRPN (ENSCAFG00020024075) ENSCAFG00020024089 UBE3A (ENSCAFG00020024115) ENSCAFG00020024121 ATP10A (ENSCAFG00020024138) ENSCAFG00020024159 GABRB3 (ENSCAFG00020024171) GABRA5 (ENSCAFG00020024190) ENSCAFG00020024191 ENSCAFG00020024193 ENSCAFG00020024194 Dog MODERN SPECIES 22 ENSCAFG00845000277 ENSCAFG00845000242 APBA2 (ENSCAFG00845021792) ENSCAFG00845021727 ENSCAFG00845021660 ENSCAFG00845021580 FAN1 (ENSCAFG00845021476) MTMR10 (ENSCAFG00845021318) TRPM1 (ENSCAFG00845020749) KLF13 (ENSCAFG00845020614) ENSCAFG00845020458 OTUD7A (ENSCAFG00845020217) ENSCAFG00845020142 CHRNA7 (ENSCAFG00845019829) ENSCAFG00845019775 ENSCAFG00845019755 ##22 MAGEL2 (ENSCAFG00845019742) NDN (ENSCAFG00845019721) SNRPN (ENSCAFG00845019483) ENSCAFG00845019038 UBE3A (ENSCAFG00845018724) ATP10A (ENSCAFG00845018321) ENSCAFG00845018217 GABRB3 (ENSCAFG00845018027) GABRA5 (ENSCAFG00845017763) ENSCAFG00845017711 ENSCAFG00845017687 GABRG3 (ENSCAFG00845017588) OCA2 (ENSCAFG00845016997) ENSCAFG00845016648 ENSCAFG00845016369 Felidae ANCESTRAL SPECIES 1 ENSGT00940000158389 ENSGT00940000159348 ENSGT00960000190734 ENSGT00940000155164 ENSGT01000000220998 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320.bb ENSGT00940000158222.ib.a ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Panthera ANCESTRAL SPECIES 31 ENSGT00940000158389 ENSGT00940000159348 ENSGT00960000190734 ENSGT00940000155164 ENSGT01000000220998 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320.bb ENSGT00940000158222.ib.a ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Panthera_a ANCESTRAL SPECIES 33 ENSGT00940000158389 ENSGT00940000159348 ENSGT00960000190734 ENSGT00940000155164 ENSGT01000000220998 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359.c ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320.bb ENSGT00940000158222.ib.a ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 leopard MODERN SPECIES 190 CHRNA7 (ENSPPRG00000020094) ENSPPRG00000020036 MKRN3 (ENSPPRG00000019027) ##22 ENSPPRG00000019014 NDN (ENSPPRG00000019002) ENSPPRG00000018987 ENSPPRG00000019918 SNRPN (ENSPPRG00000019878) ENSPPRG00000019815 lion MODERN SPECIES 6 TM2D3 (ENSPLOG00000001911) TARS3 (ENSPLOG00000002019) ENSPLOG00000002112 TJP1 (ENSPLOG00000002196) ENSPLOG00000002440 ENTREP2 (ENSPLOG00000002504) APBA2 (ENSPLOG00000002596) MCEE (ENSPLOG00000002632) ENSPLOG00000002717 FAN1 (ENSPLOG00000002745) MTMR10 (ENSPLOG00000002797) TRPM1 (ENSPLOG00000002947) KLF13 (ENSPLOG00000003239) OTUD7A (ENSPLOG00000003320) CHRNA7 (ENSPLOG00000003375) MKRN3 (ENSPLOG00000003450) ##22 ENSPLOG00000003460 NDN (ENSPLOG00000003466) ENSPLOG00000003472 ENSPLOG00000003479 ENSPLOG00000003486 UBE3A (ENSPLOG00000003739) ATP10A (ENSPLOG00000003795) GABRB3 (ENSPLOG00000003854) GABRA5 (ENSPLOG00000003906) GABRG3 (ENSPLOG00000003969) OCA2 (ENSPLOG00000000481) ENSPLOG00000000571 HERC2 (ENSPLOG00000000757) NIPA1 (ENSPLOG00000001098) ENSPLOG00000001117 Cat MODERN SPECIES 237 TARS3 (ENSFCAG00000008836) TJP1 (ENSFCAG00000012043) ENSFCAG00000004346 ENSFCAG00000051704 ENTREP2 (ENSFCAG00000008069) APBA2 (ENSFCAG00000008067) MCEE (ENSFCAG00000038444) MPHOSPH10 (ENSFCAG00000026780) ENSFCAG00000052273 FAN1 (ENSFCAG00000005498) MTMR10 (ENSFCAG00000003271) TRPM1 (ENSFCAG00000003436) KLF13 (ENSFCAG00000028152) OTUD7A (ENSFCAG00000011528) CHRNA7 (ENSFCAG00000036300) MKRN3 (ENSFCAG00000009688) ##22 MAGEL2 (ENSFCAG00000025882) NDN (ENSFCAG00000010586) SNURF (ENSFCAG00000022807) ENSFCAG00000022298 UBE3A (ENSFCAG00000027111) ATP10A (ENSFCAG00000031462) GABRB3 (ENSFCAG00000027541) GABRA5 (ENSFCAG00000011946) GABRG3 (ENSFCAG00000023805) OCA2 (ENSFCAG00000000153) ENSFCAG00000045123 HERC2 (ENSFCAG00000000154) NIPA1 (ENSFCAG00000013033) NIPA2 (ENSFCAG00000037405) CYFIP1 (ENSFCAG00000013166) Laurasiatheria_c ANCESTRAL SPECIES 1 ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000164524 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000169724 ENSGT00940000159067 ENSGT00940000155651 Chiroptera ANCESTRAL SPECIES 43 ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00940000158222 ENSGT00940000164524 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Microchiroptera ANCESTRAL SPECIES 42 ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00940000158222 ENSGT00940000164524 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234.f ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Greater horseshoe bat MODERN SPECIES 20 PCSK6 (ENSRFEG00010014200) TM2D3 (ENSRFEG00010015298) TARS3 (ENSRFEG00010015547) TJP1 (ENSRFEG00010016082) ENTREP2 (ENSRFEG00010016590) APBA2 (ENSRFEG00010016756) MCEE (ENSRFEG00010016873) MPHOSPH10 (ENSRFEG00010016930) FAN1 (ENSRFEG00010016986) MTMR10 (ENSRFEG00010017311) TRPM1 (ENSRFEG00010017381) KLF13 (ENSRFEG00010018216) OTUD7A (ENSRFEG00010018255) CHRNA7 (ENSRFEG00010018290) ENSRFEG00010018465 MKRN3 (ENSRFEG00010018503) ##22 MAGEL2 (ENSRFEG00010018582) NDN (ENSRFEG00010018594) SNRPN (ENSRFEG00010018624) ENSRFEG00010018728 UBE3A (ENSRFEG00010013693) ATP10A (ENSRFEG00010013800) GABRB3 (ENSRFEG00010013851) GABRA5 (ENSRFEG00010014136) GABRG3 (ENSRFEG00010014205) OCA2 (ENSRFEG00010014378) HERC2 (ENSRFEG00010014426) NIPA1 (ENSRFEG00010014670) NIPA2 (ENSRFEG00010014698) CYFIP1 (ENSRFEG00010014901) TUBGCP5 (ENSRFEG00010015024) Microbat MODERN SPECIES 1731 CHRNA7 (ENSMLUG00000005856) ENSMLUG00000025725 ##22 ENSMLUG00000028169 Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00980000199886 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000164524 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b Primates ANCESTRAL SPECIES 2 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00910000147744 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000164524 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b Haplorrhini ANCESTRAL SPECIES 54 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00910000147744 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Simiiformes ANCESTRAL SPECIES 28 ENSGT00940000153289.b ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00910000147744 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000164524 ENSGT00940000158222 ENSGT00940000155050.c.a ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b Platyrrhini ANCESTRAL SPECIES 38 ENSGT00390000015688 ENSGT00940000153289.b ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000164524.c.b ENSGT00940000158222 ENSGT00940000155050.d ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b Cebidae ANCESTRAL SPECIES 36 ENSGT01050000244857.C.a.a ENSGT00390000015688 ENSGT00940000153289.b ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000155050.d ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Marmoset MODERN SPECIES 18 TJP1 (ENSCJAG00000017370) ENSCJAG00000083661 ENSCJAG00000073911 ENSCJAG00000076541 ENTREP2 (ENSCJAG00000082089) APBA2 (ENSCJAG00000017493) ENSCJAG00000017520 MTMR10 (ENSCJAG00000017528) TRPM1 (ENSCJAG00000017565) KLF13 (ENSCJAG00000017617) OTUD7A (ENSCJAG00000017621) ENSCJAG00000069970 ENSCJAG00000070281 CHRNA7 (ENSCJAG00000021542) ENSCJAG00000076248 ENSCJAG00000045017 ##22 MAGEL2 (ENSCJAG00000085421) NDN (ENSCJAG00000003738) ENSCJAG00000069790 ENSCJAG00000076943 ENSCJAG00000048599 ENSCJAG00000003753 SNRPN (ENSCJAG00000003759) UBE3A (ENSCJAG00000003764) ATP10A (ENSCJAG00000074536) ENSCJAG00000077228 ENSCJAG00000071099 GABRB3 (ENSCJAG00000003857) GABRA5 (ENSCJAG00000001665) GABRG3 (ENSCJAG00000009977) ENSCJAG00000073185 Cebidae_a ANCESTRAL SPECIES 86 ENSGT01050000244857.C.a.a ENSGT00390000015688 ENSGT00940000153289.b ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000153253.b.a.h ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000164524.c.a Capuchin MODERN SPECIES 542 CHRNA7 (ENSCCAG00000005530) ENSCCAG00000028822 ##22 MAGEL2 (ENSCCAG00000022432) SNRPN (ENSCCAG00000024231) SNURF (ENSCCAG00000027105) Bolivian squirrel monkey MODERN SPECIES 290 ENSSBOG00000003895 ##22 ENSSBOG00000028162 MAGEL2 (ENSSBOG00000024745) Mas night monkey MODERN SPECIES 1055 ENSANAG00000029790 ##22 Catarrhini ANCESTRAL SPECIES 32 ENSGT00940000163338.b.a ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000004524.c.a.b ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000155050.c.a ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b Cercopithecidae ANCESTRAL SPECIES 38 ENSGT00940000163338.b.a ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000004524.c.a.b ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000164524 ENSGT00940000155050.c.a ENSGT00940000157895 ENSGT00390000003791.h ENSGT00390000011439.n ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 Rhinopithecus ANCESTRAL SPECIES 845 ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 Black snub-nosed monkey MODERN SPECIES 1507 ENSRBIG00000028379 ##22 MAGEL2 (ENSRBIG00000007801) NDN (ENSRBIG00000009280) TNFSF11 (ENSRBIG00000036386) ENSRBIG00000037894 AKAP11 (ENSRBIG00000036023) DGKH (ENSRBIG00000030309) VWA8 (ENSRBIG00000034278) RGCC (ENSRBIG00000031991) NAA16 (ENSRBIG00000037675) ENSRBIG00000026954 ENSRBIG00000043748 MTRF1 (ENSRBIG00000007069) ENSRBIG00000030206 ENSRBIG00000035054 KBTBD6 (ENSRBIG00000037297) Golden snub-nosed monkey MODERN SPECIES 2165 ENSRROG00000022034 ##22 MAGEL2 (ENSRROG00000004027) NDN (ENSRROG00000000907) Cercopithecinae ANCESTRAL SPECIES 27 ENSGT00940000163338.b.a.b ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00940000155050.c.a ENSGT00940000157895 ENSGT00390000003791.h ENSGT00390000011439.n ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000163338.b.a.a ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00910000147983 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00530000062932.c.a.a.a.a.a.b.a.a.a.a.b.b.a ENSGT00390000018637 ENSGT00910000147908 ENSGT00940000156900 ENSGT00940000155024 ENSGT00910000146953 ENSGT00940000161911 ENSGT00940000158999 ENSGT00910000147744 ENSGT00940000154617.B ENSGT00530000062932.c.a.a.a.a.a.b.a.a.a.a.b.a.b ENSGT00940000163338.b.b.a ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00910000147623 ENSGT00940000155050.c.a ENSGT00940000157895 ENSGT00390000003791.h ENSGT00390000011439.n ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000163338.b.a.a ENSGT00940000159067 ENSGT00940000155651 Macaca ANCESTRAL SPECIES 1 ENSGT00940000158943 ENSGT00910000147983 ENSGT00530000063335.A ENSGT00940000155164 ENSGT00530000062932.c.a.a.a.a.a.b.a.a.a.a.b.b.a ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00910000146953 ENSGT00940000161911 ENSGT00940000158999 ENSGT00910000147744 ENSGT00940000154617.B ENSGT00530000062932.c.a.a.a.a.a.b.a.a.a.a.b.a.b ENSGT00940000163338.b.a.b ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00910000147623 ENSGT00940000155050.c.a ENSGT00940000157895 ENSGT00390000003791.h ENSGT00390000011439.n ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975.`b.a ENSGT00940000163338.b.a.a ENSGT00940000154975.`b.b ENSGT00940000159067 Macaca_a ANCESTRAL SPECIES 2 ENSGT00940000167556.b.b.a.b.a.a.a.b.a.b.a.a.a.b ENSGT00530000063335.A ENSGT00940000161627.a.a.a.b.a.b.b.a.a.b.a ENSGT00940000155164 ENSGT00530000062932.c.a.a.a.a.a.b.a.a.a.a.b.b.a ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00980000199886 ENSGT00910000146953 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00530000062932.c.a.a.a.a.a.b.a.a.a.a.b.a.b ENSGT00940000163338.b.b.a ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163084 ENSGT00940000153104.e.b.a.b ENSGT00940000153253.b.a.h ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000155050.c.a ENSGT00940000157895 ENSGT00390000003791.h ENSGT00390000011439.n ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975.`b.a ENSGT00940000163338.b.a.a Rhesus MODERN SPECIES 17 ENSMMUG00000053369 KLF13 (ENSMMUG00000049198) OTUD7A (ENSMMUG00000012838) ENSMMUG00000055120 ENSMMUG00000055731 ENSMMUG00000056012 CHRNA7 (ENSMMUG00000022577) ENSMMUG00000060774 ENSMMUG00000061747 ENSMMUG00000060334 ENSMMUG00000063268 ENSMMUG00000021656 ENSMMUG00000019483 ENSMMUG00000058972 ENSMMUG00000008530 ENSMMUG00000046479 ##22 NDN (ENSMMUG00000005161) ENSMMUG00000060745 ENSMMUG00000054594 NPAP1 (ENSMMUG00000051503) SNURF (ENSMMUG00000041221) SNRPN (ENSMMUG00000023139) UBE3A (ENSMMUG00000000628) ATP10A (ENSMMUG00000054546) ENSMMUG00000052147 ENSMMUG00000064053 GABRB3 (ENSMMUG00000051793) GABRA5 (ENSMMUG00000023554) GABRG3 (ENSMMUG00000023555) OCA2 (ENSMMUG00000012027) ENSMMUG00000057676 Crab-eating macaque MODERN SPECIES 17 MTMR10 (ENSMFAG00000038584) TRPM1 (ENSMFAG00000003445) ENSMFAG00000053160 ENSMFAG00000059199 ENSMFAG00000043427 OTUD7A (ENSMFAG00000037629) ENSMFAG00000052082 CHRFAM7A (ENSMFAG00000001387) ENSMFAG00000048954 ENSMFAG00000045338 ENSMFAG00000057119 ENSMFAG00000060699 ENSMFAG00000051242 ENSMFAG00000059685 ENSMFAG00000061526 ENSMFAG00000043430 ##22 ENSMFAG00000049938 NPAP1 (ENSMFAG00000062702) ENSMFAG00000013529 SNRPN (ENSMFAG00000042235) SNURF (ENSMFAG00000051999) ENSMFAG00000059350 ENSMFAG00000050509 UBE3A (ENSMFAG00000037265) ATP10A (ENSMFAG00000041606) ENSMFAG00000036317 ENSMFAG00000043953 GABRB3 (ENSMFAG00000033421) GABRA5 (ENSMFAG00000000781) GABRG3 (ENSMFAG00000046358) ENSMFAG00000056497 Pig-tailed macaque MODERN SPECIES 355 ENSMNEG00000028864 ##22 MAGEL2 (ENSMNEG00000027850) NDN (ENSMNEG00000037666) Cercopithecinae_b ANCESTRAL SPECIES 98 ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 Olive baboon MODERN SPECIES 17 ENSPANG00000020053 ENSPANG00000042362 ENSPANG00000029912 ##22 ENSPANG00000040529 ENSPANG00000046426 NPAP1 (ENSPANG00000043553) SNRPN (ENSPANG00000020142) ENSPANG00000047051 UBE3A (ENSPANG00000018034) ATP10A (ENSPANG00000015694) ENSPANG00000033621 ENSPANG00000031108 GABRB3 (ENSPANG00000020144) ENSPANG00000020148 GABRG3 (ENSPANG00000030112) OCA2 (ENSPANG00000020154) HERC2 (ENSPANG00000048246) ENSPANG00000020047 Cercopithecinae_d ANCESTRAL SPECIES 257 ENSGT00940000154826.nb.a.a ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 Drill MODERN SPECIES 1567 ENSMLEG00000025603 ENSMLEG00000006500 ##22 MAGEL2 (ENSMLEG00000012947) NDN (ENSMLEG00000027833) Sooty mangabey MODERN SPECIES 395 ENSCATG00000036189 ENSCATG00000043061 ENSCATG00000034716 ##22 MAGEL2 (ENSCATG00000027098) NDN (ENSCATG00000043287) Vervet Monkey MODERN SPECIES 18 MKRN3 (ENSCSAG00000018868) ##22 ENSCSAG00000018867 NDN (ENSCSAG00000018866) NPAP1 (ENSCSAG00000018865) SNURF (ENSCSAG00000006401) SNRPN (ENSCSAG00000006406) ENSCSAG00000006411 UBE3A (ENSCSAG00000006415) ENSCSAG00000019760 ATP10A (ENSCSAG00000006422) GABRB3 (ENSCSAG00000006440) GABRA5 (ENSCSAG00000006450) ENSCSAG00000006454 ENSCSAG00000006459 OCA2 (ENSCSAG00000006478) HERC2 (ENSCSAG00000006517) Hominoidea ANCESTRAL SPECIES 34 ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00950000186460 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000164524 ENSGT00940000155050.c.a ENSGT00940000157895 ENSGT00390000003791.h ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000163338.b.a ENSGT00940000159067 Gibbon MODERN SPECIES 21 ADAM10 (ENSNLEG00000011378) LIPC (ENSNLEG00000011332) AQP9 (ENSNLEG00000011318) ENSNLEG00000028949 ALDH1A2 (ENSNLEG00000011260) ENSNLEG00000026899 ENSNLEG00000032090 ENSNLEG00000028832 NIPA1 (ENSNLEG00000030666) NIPA2 (ENSNLEG00000035813) CYFIP1 (ENSNLEG00000011085) TUBGCP5 (ENSNLEG00000010987) ENSNLEG00000026795 ENSNLEG00000031107 ENSNLEG00000036044 ENSNLEG00000027596 ##22 MAGEL2 (ENSNLEG00000018795) ENSNLEG00000028122 ENSNLEG00000001365 SNRPN (ENSNLEG00000001376) ENSNLEG00000032294 ENSNLEG00000001404 UBE3A (ENSNLEG00000001407) ATP10A (ENSNLEG00000001532) ENSNLEG00000035717 GABRB3 (ENSNLEG00000001628) GABRA5 (ENSNLEG00000032139) GABRG3 (ENSNLEG00000010534) OCA2 (ENSNLEG00000010539) HERC2 (ENSNLEG00000010563) APBA2 (ENSNLEG00000012430) Hominidae ANCESTRAL SPECIES 31 ENSGT00940000163338.b.a.c ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00950000186460 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000164524 ENSGT00940000155050.c.a ENSGT00940000157895 ENSGT00390000003791.h ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000163338.b.a.d ENSGT00940000159067 Orangutan MODERN SPECIES 6 KLF13 (ENSPPYG00000040736) TRPM1 (ENSPPYG00000006290) MTMR10 (ENSPPYG00000006289) FAN1 (ENSPPYG00000006288) ENSPPYG00000006249 APBA2 (ENSPPYG00000006280) ENTREP2 (ENSPPYG00000006281) TJP1 (ENSPPYG00000006283) ENSPPYG00000038719 ENSPPYG00000034029 ENSPPYG00000032030 ENSPPYG00000030048 ENSPPYG00000032068 ENSPPYG00000033109 ENSPPYG00000006284 ENSPPYG00000031637 ##22 MAGEL2 (ENSPPYG00000033115) NDN (ENSPPYG00000006267) NPAP1 (ENSPPYG00000006268) SNURF (ENSPPYG00000006269) ENSPPYG00000032699 UBE3A (ENSPPYG00000006272) ATP10A (ENSPPYG00000006273) GABRB3 (ENSPPYG00000006275) GABRA5 (ENSPPYG00000006276) GABRG3 (ENSPPYG00000006277) OCA2 (ENSPPYG00000006278) HERC2 (ENSPPYG00000006279) ENSPPYG00000006261 ENSPPYG00000029470 NIPA1 (ENSPPYG00000006260) Homo/Pan/Gorilla group ANCESTRAL SPECIES 37 ENSGT00940000155962 ENSGT00500000044831.a.b ENSGT00940000155651 ENSGT00940000159067 ENSGT00940000163338.b.a.c ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00950000186460 ENSGT00940000155050.c.a ENSGT00940000157895 ENSGT00390000003791.h ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 Gorilla MODERN SPECIES 6 ENSGGOG00000041185 ENSGGOG00000015216 ENSGGOG00000022578 ENSGGOG00000037765 ENSGGOG00000037322 ENSGGOG00000042537 IGHV1-2 (ENSGGOG00000038726) ENSGGOG00000038570 ENSGGOG00000042770 ENSGGOG00000026858 TUBGCP5 (ENSGGOG00000015241) CYFIP1 (ENSGGOG00000002142) NIPA2 (ENSGGOG00000002147) NIPA1 (ENSGGOG00000012394) ENSGGOG00000025127 ENSGGOG00000043626 ##22 ENSGGOG00000024364 ENSGGOG00000041536 NPAP1 (ENSGGOG00000023549) ENSGGOG00000039674 SNURF (ENSGGOG00000042638) SNRPN (ENSGGOG00000003988) UBE3A (ENSGGOG00000003955) ATP10A (ENSGGOG00000001775) ENSGGOG00000037903 GABRB3 (ENSGGOG00000011207) GABRA5 (ENSGGOG00000036809) GABRG3 (ENSGGOG00000036478) OCA2 (ENSGGOG00000005900) ENSGGOG00000039106 HERC2 (ENSGGOG00000012785) Homo/Pan group ANCESTRAL SPECIES 34 ENSGT00950000183013.e.a.c.a.a.b.b.b.a ENSGT00950000183013.e.a.c.a.a.b.a.a ENSGT01050000244871.a.a.c.a.b.a.a.b.a.b ENSGT00940000155962 ENSGT00500000044831.a.b ENSGT00940000155651 ENSGT00940000159067 ENSGT00940000163338.b.a.d.c.b ENSGT00940000163338.b.a.c ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00950000186460 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000164524 ENSGT00940000155050.c.a ENSGT00940000157895 ENSGT00390000003791.h ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 Pan ANCESTRAL SPECIES 20 ENSGT00950000183013.e.a.c.a.a.b.b.b.a ENSGT00950000183013.e.a.c.a.a.b.a.a ENSGT01050000244871.a.a.c.a.b.a.a.b.a.b ENSGT00940000155962 ENSGT00500000044831.a.b ENSGT00940000155651 ENSGT00940000159067 ENSGT00940000163338.b.a.c ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00950000186460 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000164524 ENSGT00940000155050.c.a ENSGT00940000157895 ENSGT00390000003791.h ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00950000182935.B.a.q.a.b ENSGT00940000155164 Bonobo MODERN SPECIES 6 TUBGCP5 (ENSPPAG00000028817) CYFIP1 (ENSPPAG00000027494) NIPA2 (ENSPPAG00000031169) NIPA1 (ENSPPAG00000035632) ENSPPAG00000037386 ENSPPAG00000033415 ##22 MAGEL2 (ENSPPAG00000036442) ENSPPAG00000010428 ENSPPAG00000027823 SNRPN (ENSPPAG00000027650) SNURF (ENSPPAG00000030924) ENSPPAG00000035186 ENSPPAG00000043325 UBE3A (ENSPPAG00000037743) ATP10A (ENSPPAG00000007479) ENSPPAG00000037400 GABRB3 (ENSPPAG00000039754) GABRA5 (ENSPPAG00000037305) GABRG3 (ENSPPAG00000036643) OCA2 (ENSPPAG00000036995) HERC2 (ENSPPAG00000031770) Chimpanzee MODERN SPECIES 6 ENSPTRG00000046669 ENSPTRG00000045003 ENSPTRG00000045600 ENSPTRG00000044902 ENSPTRG00000045652 ENSPTRG00000024048 ENSPTRG00000006815 ENSPTRG00000046381 TUBGCP5 (ENSPTRG00000006817) CYFIP1 (ENSPTRG00000006818) NIPA2 (ENSPTRG00000052089) NIPA1 (ENSPTRG00000051453) ENSPTRG00000029928 ENSPTRG00000052123 ENSPTRG00000051938 MKRN3 (ENSPTRG00000051959) ##22 MAGEL2 (ENSPTRG00000032582) ENSPTRG00000042825 NPAP1 (ENSPTRG00000030358) ENSPTRG00000044022 SNRPN (ENSPTRG00000006826) SNURF (ENSPTRG00000034046) ENSPTRG00000046808 UBE3A (ENSPTRG00000006829) ATP10A (ENSPTRG00000030356) ENSPTRG00000047058 GABRB3 (ENSPTRG00000006831) GABRA5 (ENSPTRG00000006832) GABRG3 (ENSPTRG00000052476) OCA2 (ENSPTRG00000006834) ENSPTRG00000050016 Human MODERN SPECIES 6 POTEB (ENSG00000233917) OR4M2-OT1 (ENSG00000285472) OR4M2 (ENSG00000274102) OR4N4 (ENSG00000183706) IGHV1OR15-1 (ENSG00000270505) IGHV4OR15-8 (ENSG00000259261) GOLGA6L22 (ENSG00000277865) NIPA1 (ENSG00000170113) NIPA2 (ENSG00000140157) CYFIP1 (ENSG00000273749) TUBGCP5 (ENSG00000275835) GOLGA6L1 (ENSG00000273976) GOLGA6L26 (ENSG00000273756) GOLGA8S (ENSG00000261739) GOLGA6L2 (ENSG00000174450) MKRN3 (ENSG00000179455) ##22 MAGEL2 (ENSG00000254585) NDN (ENSG00000182636) NPAP1 (ENSG00000185823) SNRPN (ENSG00000128739) SNURF (ENSG00000273173) UBE3A (ENSG00000114062) ATP10A (ENSG00000206190) GABRB3 (ENSG00000166206) GABRA5 (ENSG00000186297) GABRG3 (ENSG00000182256) OCA2 (ENSG00000104044) HERC2 (ENSG00000128731) GOLGA6L24 (ENSG00000237850) GOLGA8F (ENSG00000153684) GOLGA8G (ENSG00000183629) Tarsier MODERN SPECIES 3228 ENSTSYG00000033033 ##22 MAGEL2 (ENSTSYG00000030527) Strepsirrhini ANCESTRAL SPECIES 68 ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 Bushbaby MODERN SPECIES 353 MKRN3 (ENSOGAG00000004569) ##22 ENSOGAG00000025024 NDN (ENSOGAG00000000285) ENSOGAG00000030427 ENSOGAG00000029351 SNRPN (ENSOGAG00000007392) Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00980000199886 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Glires ANCESTRAL SPECIES 15 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00980000199886 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000155052.e.b.b ENSGT00940000164524 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 Lagomorpha ANCESTRAL SPECIES 84 ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999.f ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Rabbit MODERN SPECIES 8 TARS3 (ENSOCUG00000010740) TJP1 (ENSOCUG00000004338) NSMCE3 (ENSOCUG00000007912) ENTREP2 (ENSOCUG00000012443) APBA2 (ENSOCUG00000012437) ENSOCUG00000008055 MPHOSPH10 (ENSOCUG00000025115) FAN1 (ENSOCUG00000004306) MTMR10 (ENSOCUG00000023083) TRPM1 (ENSOCUG00000004314) ENSOCUG00000035146 OTUD7A (ENSOCUG00000013856) ENSOCUG00000025900 CHRNA7 (ENSOCUG00000002580) ENSOCUG00000031359 MKRN3 (ENSOCUG00000012822) ##22 ENSOCUG00000024436 ENSOCUG00000032204 NDN (ENSOCUG00000003250) ENSOCUG00000030537 ENSOCUG00000029162 ENSOCUG00000022682 SNRPN (ENSOCUG00000003532) ENSOCUG00000030271 ENSOCUG00000039001 UBE3A (ENSOCUG00000017465) ENSOCUG00000034404 ATP10A (ENSOCUG00000006386) GABRB3 (ENSOCUG00000003638) ENSOCUG00000029227 GABRA5 (ENSOCUG00000012905) Rodentia ANCESTRAL SPECIES 3 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00980000199886 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000155052.e.b.b ENSGT00940000164524 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 Rodentia_B ANCESTRAL SPECIES 11 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627.d.a ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00980000199886 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Myomorpha ANCESTRAL SPECIES 13 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627.d.a ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00980000199886 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Muroidea ANCESTRAL SPECIES 12 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627.d.a ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00980000199886 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Muroidea_A ANCESTRAL SPECIES ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627.d.a ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Murinae ANCESTRAL SPECIES ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627.d.a ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00390000007081.b.b ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Mus ANCESTRAL SPECIES ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627.d.a ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00860000135847 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00390000007081.b.b ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320.x ENSGT00940000164524 ENSGT00390000009320.w ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 Mus_A ANCESTRAL SPECIES 1 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627.d.a ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00860000135847 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00390000007081.b.b ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320.x ENSGT00940000164524 ENSGT00390000009320.w ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 Ryukyu mouse MODERN SPECIES 16 Tarsl2 (MGP_CAROLIEiJ_G0029834) MGP_CAROLIEiJ_G0029833 Nsmce3 (MGP_CAROLIEiJ_G0029832) Entrep2 (MGP_CAROLIEiJ_G0029831) Apba2 (MGP_CAROLIEiJ_G0029830) Mcee (MGP_CAROLIEiJ_G0029829) Mphosph10 (MGP_CAROLIEiJ_G0029828) Fan1 (MGP_CAROLIEiJ_G0029827) Mtmr10 (MGP_CAROLIEiJ_G0029826) Trpm1 (MGP_CAROLIEiJ_G0029825) MGP_CAROLIEiJ_G0029824 Klf13 (MGP_CAROLIEiJ_G0029823) Otud7a (MGP_CAROLIEiJ_G0029822) Chrna7 (MGP_CAROLIEiJ_G0029821) Peg12 (MGP_CAROLIEiJ_G0029820) Mkrn3 (MGP_CAROLIEiJ_G0029819) ##22 Magel2 (MGP_CAROLIEiJ_G0029818) Ndn (MGP_CAROLIEiJ_G0029817) MGP_CAROLIEiJ_G0029816 Snrpn (MGP_CAROLIEiJ_G0029815) MGP_CAROLIEiJ_G0029814 Ube3a (MGP_CAROLIEiJ_G0029813) Atp10a (MGP_CAROLIEiJ_G0029812) Gabrb3 (MGP_CAROLIEiJ_G0029811) Gabra5 (MGP_CAROLIEiJ_G0029810) Gabrg3 (MGP_CAROLIEiJ_G0029809) Oca2 (MGP_CAROLIEiJ_G0029808) Herc2 (MGP_CAROLIEiJ_G0029807) Nipa1 (MGP_CAROLIEiJ_G0029806) Nipa2 (MGP_CAROLIEiJ_G0029805) Cyfip1 (MGP_CAROLIEiJ_G0029804) Mus_B ANCESTRAL SPECIES ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627.d.a ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00860000135847 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00390000007081.b.b ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320.x.a ENSGT00940000164524 ENSGT00390000009320.w ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 Mouse MODERN SPECIES 16 Tarsl2 (ENSMUSG00000030515) Tjp1 (ENSMUSG00000030516) Nsmce3 (ENSMUSG00000070520) Entrep2 (ENSMUSG00000030518) Apba2 (ENSMUSG00000030519) Mcee (ENSMUSG00000033429) Mphosph10 (ENSMUSG00000030521) Fan1 (ENSMUSG00000033458) Mtmr10 (ENSMUSG00000030522) Trpm1 (ENSMUSG00000030523) E030018B13Rik (ENSMUSG00000095061) Klf13 (ENSMUSG00000052040) Otud7a (ENSMUSG00000033510) Chrna7 (ENSMUSG00000030525) Peg12 (ENSMUSG00000070526) Mkrn3 (ENSMUSG00000070527) ##22 Magel2 (ENSMUSG00000056972) Ndn (ENSMUSG00000033585) Snurf (ENSMUSG00000102627) Snrpn (ENSMUSG00000102252) Ube3a (ENSMUSG00000025326) Atp10a (ENSMUSG00000025324) Gabrb3 (ENSMUSG00000033676) Gabra5 (ENSMUSG00000055078) Gabrg3 (ENSMUSG00000055026) Oca2 (ENSMUSG00000030450) Herc2 (ENSMUSG00000030451) Nipa1 (ENSMUSG00000047037) Nipa2 (ENSMUSG00000030452) Cyfip1 (ENSMUSG00000030447) Tubgcp5 (ENSMUSG00000033790) Mus_C ANCESTRAL SPECIES 13 ENSGT00940000159348 ENSGT00940000155164 ENSGT00940000163627.d.a ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00860000135847 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00390000007081.b.b ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320.x.a ENSGT00940000164524 ENSGT00390000009320.w ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 spretus MODERN SPECIES 16 Tm2d3 (MGP_SPRETEiJ_G0030937) Tjp1 (MGP_SPRETEiJ_G0030936) Nsmce3 (MGP_SPRETEiJ_G0030935) Entrep2 (MGP_SPRETEiJ_G0030934) Apba2 (MGP_SPRETEiJ_G0030933) Mcee (MGP_SPRETEiJ_G0030932) Mphosph10 (MGP_SPRETEiJ_G0030931) Fan1 (MGP_SPRETEiJ_G0030930) Mtmr10 (MGP_SPRETEiJ_G0030929) Trpm1 (MGP_SPRETEiJ_G0030928) E030018B13Rik (MGP_SPRETEiJ_G0030927) Klf13 (MGP_SPRETEiJ_G0030926) Otud7a (MGP_SPRETEiJ_G0030925) Chrna7 (MGP_SPRETEiJ_G0030924) Peg12 (MGP_SPRETEiJ_G0030923) Mkrn3 (MGP_SPRETEiJ_G0030922) ##22 Magel2 (MGP_SPRETEiJ_G0030921) Ndn (MGP_SPRETEiJ_G0030920) MGP_SPRETEiJ_G0030919 Snrpn (MGP_SPRETEiJ_G0030918) MGP_SPRETEiJ_G0030917 Ube3a (MGP_SPRETEiJ_G0030916) Atp10a (MGP_SPRETEiJ_G0030915) Gabrb3 (MGP_SPRETEiJ_G0030914) Gabra5 (MGP_SPRETEiJ_G0030913) Gabrg3 (MGP_SPRETEiJ_G0030912) Oca2 (MGP_SPRETEiJ_G0030911) Herc2 (MGP_SPRETEiJ_G0030910) Nipa1 (MGP_SPRETEiJ_G0030909) MGP_SPRETEiJ_G0030908 Cyfip1 (MGP_SPRETEiJ_G0030907) Steppe mouse MODERN SPECIES 2740 ENSMSIG00000032129 ENSMSIG00000032132 ENSMSIG00000032133 Peg12 (ENSMSIG00000032134) Mkrn3 (ENSMSIG00000032135) ##22 Magel2 (ENSMSIG00000032136) Ndn (ENSMSIG00000032137) ENSMSIG00000032138 Shrew mouse MODERN SPECIES Tarsl2 (MGP_PahariEiJ_G0013059) Tjp1 (MGP_PahariEiJ_G0013058) Nsmce3 (MGP_PahariEiJ_G0013057) Entrep2 (MGP_PahariEiJ_G0013056) Apba2 (MGP_PahariEiJ_G0013055) Mcee (MGP_PahariEiJ_G0013054) Mphosph10 (MGP_PahariEiJ_G0013053) Fan1 (MGP_PahariEiJ_G0013052) Mtmr10 (MGP_PahariEiJ_G0013051) Trpm1 (MGP_PahariEiJ_G0013050) MGP_PahariEiJ_G0013049 Klf13 (MGP_PahariEiJ_G0013048) Otud7a (MGP_PahariEiJ_G0013047) Chrna7 (MGP_PahariEiJ_G0013046) Peg12 (MGP_PahariEiJ_G0013045) Mkrn3 (MGP_PahariEiJ_G0013044) ##22 Magel2 (MGP_PahariEiJ_G0013043) Ndn (MGP_PahariEiJ_G0013042) Snurf (MGP_PahariEiJ_G0013041) Snrpn (MGP_PahariEiJ_G0013040) MGP_PahariEiJ_G0013039 Ube3a (MGP_PahariEiJ_G0013038) Atp10a (MGP_PahariEiJ_G0013037) Gabrb3 (MGP_PahariEiJ_G0013036) Gabra5 (MGP_PahariEiJ_G0013035) Gabrg3 (MGP_PahariEiJ_G0013034) Oca2 (MGP_PahariEiJ_G0013033) Herc2 (MGP_PahariEiJ_G0013032) Nipa1 (MGP_PahariEiJ_G0013031) Nipa2 (MGP_PahariEiJ_G0013030) Cyfip1 (MGP_PahariEiJ_G0013029) Rat MODERN SPECIES Entrep2 (ENSRNOG00000023496) Apba2 (ENSRNOG00000016358) Mcee (ENSRNOG00000016327) Mphosph10 (ENSRNOG00000016266) Fan1 (ENSRNOG00000023985) Mtmr10 (ENSRNOG00000016090) Trpm1 (ENSRNOG00000015829) ENSRNOG00000064709 Klf13 (ENSRNOG00000015822) LOC120097335 (ENSRNOG00000065214) Otud7a (ENSRNOG00000015503) Chrna7 (ENSRNOG00000010853) LOC102548067 (ENSRNOG00000051782) ENSRNOG00000066862 Peg12 (ENSRNOG00000024429) Mkrn3 (ENSRNOG00000010172) ##22 Magel2 (ENSRNOG00000010158) Ndn (ENSRNOG00000010146) ENSRNOG00000069701 ENSRNOG00000063232 AC080157.1 (ENSRNOG00000058277) ENSRNOG00000069377 Snrpn (ENSRNOG00000054391) Ube3a (ENSRNOG00000015734) Atp10a (ENSRNOG00000056228) ENSRNOG00000066632 Gabrb3 (ENSRNOG00000060599) Gabra5 (ENSRNOG00000010803) Gabrg3 (ENSRNOG00000014862) Oca2 (ENSRNOG00000014465) Herc2 (ENSRNOG00000013718) Cricetidae ANCESTRAL SPECIES 1 ENSGT00940000153289.b ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 Cricetinae ANCESTRAL SPECIES 15 ENSGT00940000153289.b ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 Golden Hamster MODERN SPECIES 901 Mkrn3 (ENSMAUG00000016158) ##22 Magel2 (ENSMAUG00000015002) Ndn (ENSMAUG00000016570) ENSMAUG00000015315 Chinese hamster chok1gshd MODERN SPECIES 101 Apba2 (ENSCGRG00001018432) Mcee (ENSCGRG00001014675) Mphosph10 (ENSCGRG00001008929) Fan1 (ENSCGRG00001003086) Mtmr10 (ENSCGRG00001019972) Trpm1 (ENSCGRG00001014455) ENSCGRG00001012379 Klf13 (ENSCGRG00001011758) Cks1brt (ENSCGRG00001022286) Otud7a (ENSCGRG00001017521) Chrna7 (ENSCGRG00001013144) ENSCGRG00001012028 ENSCGRG00001010545 ENSCGRG00001009285 ENSCGRG00001011348 Mkrn3 (ENSCGRG00001010613) ##22 Magel2 (ENSCGRG00001013974) Ndn (ENSCGRG00001009345) Cricetidae_B ANCESTRAL SPECIES 33 ENSGT00940000153289.b ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 Northern American deer mouse MODERN SPECIES Tjp1 (ENSPEMG00000020140) Entrep2 (ENSPEMG00000019895) Apba2 (ENSPEMG00000000431) Mcee (ENSPEMG00000013474) Mphosph10 (ENSPEMG00000019667) Fan1 (ENSPEMG00000019876) Mtmr10 (ENSPEMG00000019517) Trpm1 (ENSPEMG00000019795) ENSPEMG00000027285 ENSPEMG00000024613 Otud7a (ENSPEMG00000019881) ENSPEMG00000031364 Chrna7 (ENSPEMG00000015506) ENSPEMG00000027042 ENSPEMG00000024469 Mkrn3 (ENSPEMG00000009895) ##22 Magel2 (ENSPEMG00000025417) Ndn (ENSPEMG00000001158) ENSPEMG00000026068 ENSPEMG00000000510 ENSPEMG00000019573 ENSPEMG00000025848 ENSPEMG00000028866 ENSPEMG00000029784 ENSPEMG00000024562 ENSPEMG00000027816 ENSPEMG00000027080 ENSPEMG00000025968 Mrgprx1 (ENSPEMG00000007777) ENSPEMG00000022426 ENSPEMG00000021299 Prairie vole MODERN SPECIES 177 Mkrn3 (ENSMOCG00000001386) ##22 Magel2 (ENSMOCG00000000058) Ndn (ENSMOCG00000022425) Upper Galilee mountains blind mole rat MODERN SPECIES 1540 ENSNGAG00000000341 ENSNGAG00000009916 Apba2 (ENSNGAG00000002267) Mcee (ENSNGAG00000016870) Mphosph10 (ENSNGAG00000015093) Fan1 (ENSNGAG00000019775) ENSNGAG00000000344 ENSNGAG00000017400 ENSNGAG00000016259 ENSNGAG00000014136 ENSNGAG00000019865 ENSNGAG00000013319 ENSNGAG00000013013 Otud7a (ENSNGAG00000016073) Chrna7 (ENSNGAG00000013389) Mkrn3 (ENSNGAG00000006696) ##22 Magel2 (ENSNGAG00000008164) Ndn (ENSNGAG00000006239) Lesser Egyptian jerboa MODERN SPECIES 65 Snrpa1 (ENSJJAG00000002769) Pcsk6 (ENSJJAG00000018978) Tm2d3 (ENSJJAG00000010106) Tjp1 (ENSJJAG00000016703) Nsmce3 (ENSJJAG00000006681) ENSJJAG00000022341 Mcee (ENSJJAG00000019373) Mphosph10 (ENSJJAG00000015017) ENSJJAG00000020014 ENSJJAG00000009888 ENSJJAG00000013096 ENSJJAG00000014501 Klf13 (ENSJJAG00000009193) Otud7a (ENSJJAG00000006860) Chrna7 (ENSJJAG00000010489) Mkrn3 (ENSJJAG00000007520) ##22 Ndn (ENSJJAG00000002618) Kangaroo rat MODERN SPECIES 334 Tarsl2 (ENSDORG00000009653) Tjp1 (ENSDORG00000013416) Entrep2 (ENSDORG00000004962) ENSDORG00000014998 Nsmce3 (ENSDORG00000004984) Apba2 (ENSDORG00000004960) Mcee (ENSDORG00000006006) Mphosph10 (ENSDORG00000006007) ENSDORG00000014623 ENSDORG00000024136 ENSDORG00000014624 ENSDORG00000026264 ENSDORG00000023169 Otud7a (ENSDORG00000029796) Chrna7 (ENSDORG00000010785) Mkrn3 (ENSDORG00000027697) ##22 Snurf (ENSDORG00000006871) Snrpn (ENSDORG00000004527) Ube3a (ENSDORG00000004100) Atp10a (ENSDORG00000002131) Gabrb3 (ENSDORG00000002704) Gabra5 (ENSDORG00000027530) ENSDORG00000024538 Herc2 (ENSDORG00000009116) Oca2 (ENSDORG00000002790) ENSDORG00000024211 Tubgcp5 (ENSDORG00000011370) Cyfip1 (ENSDORG00000012763) ENSDORG00000027046 Nipa1 (ENSDORG00000025660) Pias1 (ENSDORG00000002601) Rodentia_A ANCESTRAL SPECIES 2 ENSGT00940000153289.b ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Hystricomorpha ANCESTRAL SPECIES 40 ENSGT00940000153289.b ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Hystricomorpha_a ANCESTRAL SPECIES 25 ENSGT00940000153289.b ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Hystricomorpha_b ANCESTRAL SPECIES 20 ENSGT00940000153289.b ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348 ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 Long-tailed chinchilla MODERN SPECIES 123 TM2D3 (ENSCLAG00000012439) TARS3 (ENSCLAG00000016873) TJP1 (ENSCLAG00000017350) ENTREP2 (ENSCLAG00000012714) APBA2 (ENSCLAG00000009202) MCEE (ENSCLAG00000011216) MPHOSPH10 (ENSCLAG00000012756) FAN1 (ENSCLAG00000011069) MTMR10 (ENSCLAG00000011407) TRPM1 (ENSCLAG00000013295) ENSCLAG00000014699 ENSCLAG00000010350 ENSCLAG00000009342 ENSCLAG00000009898 CHRNA7 (ENSCLAG00000010378) MKRN3 (ENSCLAG00000010927) ##22 MAGEL2 (ENSCLAG00000017742) NDN (ENSCLAG00000017784) ENSCLAG00000010058 ENSCLAG00000012264 SNURF (ENSCLAG00000012703) SNRPN (ENSCLAG00000011376) Sciuridae ANCESTRAL SPECIES 11 ENSGT00940000153289.b ENSGT00940000159506 ENSGT00940000158389 ENSGT00940000159348.b ENSGT00940000155164 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 ENSGT00940000155050 ENSGT00940000157895 ENSGT00940000154713.A ENSGT00940000156234 ENSGT00940000155607 ENSGT01030000234550.b ENSGT00940000154975 ENSGT00940000159067 ENSGT00940000155651 ENSGT00500000044831.a.b ENSGT00940000155962 Marmotini ANCESTRAL SPECIES 140 ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 Marmotini_b ANCESTRAL SPECIES 297 ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 Squirrel MODERN SPECIES 405 ENSSTOG00000031944 MKRN3 (ENSSTOG00000006095) ##22 MAGEL2 (ENSSTOG00000027354) NDN (ENSSTOG00000026863) ENSSTOG00000033123 SNURF (ENSSTOG00000032180) SNRPN (ENSSTOG00000001339) Arctic ground squirrel MODERN SPECIES 513 ENSUPAG00010007000 ##22 MAGEL2 (ENSUPAG00010007016) NDN (ENSUPAG00010007026) SNURF (ENSUPAG00010007034) SNRPN (ENSUPAG00010007042) Alpin marmot MODERN SPECIES 123 MKRN3 (ENSMMMG00000019146) ##22 MAGEL2 (ENSMMMG00000019147) NDN (ENSMMMG00000019148) ENSMMMG00000019154 SNURF (ENSMMMG00000019158) SNRPN (ENSMMMG00000019159) Eurasian red squirrel MODERN SPECIES 11 ENTREP2 (ENSSVLG00005000828) APBA2 (ENSSVLG00005000759) ENSSVLG00005000712 ENSSVLG00005000687 MCEE (ENSSVLG00005000669) MPHOSPH10 (ENSSVLG00005000639) FAN1 (ENSSVLG00005000605) MTMR10 (ENSSVLG00005000571) TRPM1 (ENSSVLG00005000435) KLF13 (ENSSVLG00005000287) OTUD7A (ENSSVLG00005000272) ENSSVLG00005000226 ENSSVLG00005000200 ENSSVLG00005000184 ENSSVLG00005000172 MKRN3 (ENSSVLG00005000160) ##22 MAGEL2 (ENSSVLG00005000130) NDN (ENSSVLG00005000123) ENSSVLG00005000097 ENSSVLG00005011846 ENSSVLG00005011795 SNURF (ENSSVLG00005011691) SNRPN (ENSSVLG00005011766) ENSSVLG00005011656 ENSSVLG00005011544 ENSSVLG00005011480 UBE3A (ENSSVLG00005011271) ENSSVLG00005011214 ENSSVLG00005011189 ATP10A (ENSSVLG00005010147) GABRB3 (ENSSVLG00005009710) Atlantogenata ANCESTRAL SPECIES 146 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 Xenarthra ANCESTRAL SPECIES 2028 ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163084 Armadillo DUPLICATION Armadillo MODERN SPECIES 2434 ENSDNOG00000005231 ##22 NDN (ENSDNOG00000047509) Armadillo MODERN SPECIES 3530 ENSDNOG00000035378 ENSDNOG00000013019 ENSDNOG00000049077 ##22 Sloth MODERN SPECIES 8457 MKRN3 (ENSCHOG00000004895) ##22 Afrotheria ANCESTRAL SPECIES 178 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 Afrotheria_a ANCESTRAL SPECIES 180 ENSGT00940000163627 ENSGT00530000063335.A ENSGT00940000158943 ENSGT00940000153941.a.a ENSGT00390000011359 ENSGT00390000018637 ENSGT00940000156900 ENSGT00940000155024 ENSGT00940000161911 ENSGT00940000158999 ENSGT00940000154617.B ENSGT00950000183077.a.a.a.b ##22 ENSGT00940000163006 ENSGT00940000163084 ENSGT00390000009320 ENSGT00940000158222 Hyrax MODERN SPECIES 10244 MKRN3 (ENSPCAG00000016788) ##22 Elephant MODERN SPECIES 618 TM2D3 (ENSLAFG00000011938) TARS3 (ENSLAFG00000011941) TJP1 (ENSLAFG00000002222) ENSLAFG00000031989 NSMCE3 (ENSLAFG00000002523) ENSLAFG00000000765 APBA2 (ENSLAFG00000028972) MCEE (ENSLAFG00000004477) MPHOSPH10 (ENSLAFG00000011341) FAN1 (ENSLAFG00000018373) MTMR10 (ENSLAFG00000018374) TRPM1 (ENSLAFG00000018381) ENSLAFG00000030149 OTUD7A (ENSLAFG00000000988) ENSLAFG00000008943 MKRN3 (ENSLAFG00000017075) ##22 ENSLAFG00000030286 NDN (ENSLAFG00000005577) SNURF (ENSLAFG00000020703) SNRPN (ENSLAFG00000009458) Marsupialia ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.b ##22 Marsupialia_b ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.b ##22 Diprotodontia ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.b ##22 Diprotodontia_a ANCESTRAL SPECIES ENSGT00950000183077.a.a.a.b ##22 koala MODERN SPECIES 153 ENSPCIG00000034797 POU3F4 (ENSPCIG00000018483) RPS6KA6 (ENSPCIG00000018480) HDX (ENSPCIG00000018657) ENSPCIG00000011754 ENSPCIG00000036766 ENSPCIG00000002457 ENSPCIG00000032809 ENSPCIG00000002492 ZNF711 (ENSPCIG00000002535) POF1B (ENSPCIG00000002558) ENSPCIG00000034179 ENSPCIG00000002575 ENSPCIG00000021250 ENSPCIG00000037431 ENSPCIG00000000361 ##22 Theria ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Eutheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Glires ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Rodentia ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Rodentia_B ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Myomorpha ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Muroidea ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Cricetidae ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Cricetinae ANCESTRAL SPECIES 23 ENSGT00940000163413 ENSGT00940000161483 ENSGT01100000263477.C ENSGT01100000263477.A.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044.w ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.a.a.a.a ##22 ENSGT00950000183077.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Golden Hamster MODERN SPECIES 817 Prss37 (ENSMAUG00000014269) Tas2r108 (ENSMAUG00000015894) ENSMAUG00000016883 Wee2 (ENSMAUG00000013105) ENSMAUG00000013965 Dennd11 (ENSMAUG00000014079) Agk (ENSMAUG00000015011) ENSMAUG00000016360 ENSMAUG00000017929 ENSMAUG00000018327 Mrps33 (ENSMAUG00000014314) Braf (ENSMAUG00000016066) Ndufb2 (ENSMAUG00000000340) Adck2 (ENSMAUG00000000751) Dennd2a (ENSMAUG00000000468) ENSMAUG00000001183 ##22 Rab19 (ENSMAUG00000001491) ENSMAUG00000003611 Kdm7a (ENSMAUG00000010299) Parp12 (ENSMAUG00000005236) Tbxas1 (ENSMAUG00000008938) Hipk2 (ENSMAUG00000011118) Clec2l (ENSMAUG00000011258) Klrg2 (ENSMAUG00000011706) Luc7l2 (ENSMAUG00000012552) Ubn2 (ENSMAUG00000013815) Laurasiatheria ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Chiroptera ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Microchiroptera ANCESTRAL SPECIES ENSGT00950000183077.a.a.b ##22 Greater horseshoe bat MODERN SPECIES HDX (ENSRFEG00010005055) ENSRFEG00010005048 ENSRFEG00010005042 ENSRFEG00010005034 ZNF711 (ENSRFEG00010005016) POF1B (ENSRFEG00010004986) CHM (ENSRFEG00010004965) ENSRFEG00010004953 DACH2 (ENSRFEG00010004914) ENSRFEG00010004884 ENSRFEG00010004881 ENSRFEG00010004876 KLHL4 (ENSRFEG00010004859) ENSRFEG00010004852 ENSRFEG00010004844 ENSRFEG00010004834 ##22 CPXCR1 (ENSRFEG00010004825) ENSRFEG00010004813 ENSRFEG00010004803 PABPC5 (ENSRFEG00010004787) ENSRFEG00010004780 ENSRFEG00010004747 NAP1L3 (ENSRFEG00010004744) ENSRFEG00010004739 ENSRFEG00010004728 ENSRFEG00010004722 ENSRFEG00010004710 ENSRFEG00010004703 ENSRFEG00010004697 ENSRFEG00010004688 ENSRFEG00010004680 Marsupialia ANCESTRAL SPECIES 4 ENSGT00940000161483.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b.a.b ENSGT01100000263477.A.b.b.a.a.a ENSGT01100000263477.A.b.b.b.b ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a.k ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00710000106871 ENSGT00530000063472.b.b.a.a Opossum MODERN SPECIES 7 T2R3A (ENSMODG00000013594) T2R3J (ENSMODG00000043417) SSBP1 (ENSMODG00000038788) ENSMODG00000013606 DENND11 (ENSMODG00000013610) AGK (ENSMODG00000013616) ENSMODG00000037920 ENSMODG00000027559 ENSMODG00000029640 ENSMODG00000013621 ENSMODG00000040286 ENSMODG00000041532 BRAF (ENSMODG00000013637) ADCK2 (ENSMODG00000013645) DENND2A (ENSMODG00000013670) ENSMODG00000013686 ##22 RAB19 (ENSMODG00000013653) ENSMODG00000013696 KDM7A (ENSMODG00000013709) PARP12 (ENSMODG00000013713) TBXAS1 (ENSMODG00000013723) ENSMODG00000036542 HIPK2 (ENSMODG00000013733) CLEC2L (ENSMODG00000025459) ENSMODG00000013737 ENSMODG00000013748 FMC1 (ENSMODG00000013750) UBN2 (ENSMODG00000013755) TTC26 (ENSMODG00000013759) ENSMODG00000013769 ENSMODG00000024430 Marsupialia_b ANCESTRAL SPECIES 10 ENSGT01100000263477.C ENSGT01100000263477.A.b.b.a.b ENSGT01100000263477.A.b.b.a.a.a ENSGT01100000263477.A.b.b.b.b ENSGT01100000263477.A.b.b.b.a ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a.k ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00530000063472.b.b.a.a ENSGT00950000182881.a.a.a Diprotodontia ANCESTRAL SPECIES 28 ENSGT00940000161483.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b.a.b ENSGT01100000263477.A.b.b.a.a.a ENSGT01100000263477.A.b.b.b.b ENSGT01100000263477.A.b.b.b.a ENSGT00390000002796 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a.k ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00530000063472.b.b.a.a ENSGT00950000182881.a.a.a Diprotodontia_a ANCESTRAL SPECIES 27 ENSGT00940000161483.b ENSGT01100000263477.C ENSGT01100000263477.A.b.b.a.b ENSGT01100000263477.A.b.b.a.a.a ENSGT01100000263477.A.b.b.b.b ENSGT01100000263477.A.b.b.b.a ENSGT00390000002796 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a.b ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000154649.B ENSGT00940000157903 ENSGT00940000157742 ENSGT00940000162503 ENSGT00940000162997 ENSGT00950000183213.a.a.a.k ENSGT00390000012258 ENSGT00940000155858 ENSGT00390000000159 ENSGT00940000162001 ENSGT00530000063472.b.b.a.a ENSGT00950000182881.a.a.a Common wonbat MODERN SPECIES 1093 ENSVURG00010014463 ENSVURG00010014459 ENSVURG00010014454 ENSVURG00010014448 ENSVURG00010014435 ENSVURG00010014431 SSBP1 (ENSVURG00010014427) DENND11 (ENSVURG00010014403) AGK (ENSVURG00010014366) ENSVURG00010014356 MRPS33 (ENSVURG00010014348) BRAF (ENSVURG00010014328) NDUFB2 (ENSVURG00010014321) ADCK2 (ENSVURG00010014316) DENND2A (ENSVURG00010014300) ENSVURG00010014287 ##22 RAB19 (ENSVURG00010014282) SLC37A3 (ENSVURG00010014268) KDM7A (ENSVURG00010014231) PARP12 (ENSVURG00010014215) TBXAS1 (ENSVURG00010014194) HIPK2 (ENSVURG00010014172) CLEC2L (ENSVURG00010014164) ENSVURG00010014134 ENSVURG00010014104 FMC1 (ENSVURG00010014094) UBN2 (ENSVURG00010014064) TTC26 (ENSVURG00010014056) ENSVURG00010014047 ENSVURG00010014031 KIAA1549 (ENSVURG00010013982) koala MODERN SPECIES 70 ENSPCIG00000023651 ENSPCIG00000023331 ENSPCIG00000005366 ENSPCIG00000034782 ENSPCIG00000032279 SSBP1 (ENSPCIG00000036171) DENND11 (ENSPCIG00000016337) AGK (ENSPCIG00000016339) ENSPCIG00000016343 ENSPCIG00000016346 MRPS33 (ENSPCIG00000016348) BRAF (ENSPCIG00000016351) NDUFB2 (ENSPCIG00000016365) ADCK2 (ENSPCIG00000016367) DENND2A (ENSPCIG00000016371) ENSPCIG00000016373 ##22 RAB19 (ENSPCIG00000036522) SLC37A3 (ENSPCIG00000016378) KDM7A (ENSPCIG00000016381) PARP12 (ENSPCIG00000016386) TBXAS1 (ENSPCIG00000036732) HIPK2 (ENSPCIG00000023035) CLEC2L (ENSPCIG00000034555) ENSPCIG00000023028 ENSPCIG00000034509 FMC1 (ENSPCIG00000020085) UBN2 (ENSPCIG00000024850) TTC26 (ENSPCIG00000019467) ENSPCIG00000021649 ENSPCIG00000021651 KIAA1549 (ENSPCIG00000021658) Wallaby MODERN SPECIES 3908 ENSMEUG00000007399 ##22 Tasmanian devil MODERN SPECIES 4 ENSSHAG00000004852 ENSSHAG00000004582 ENSSHAG00000022993 ENSSHAG00000004218 ENSSHAG00000028031 ENSSHAG00000024683 SSBP1 (ENSSHAG00000001629) WEE2 (ENSSHAG00000001703) DENND11 (ENSSHAG00000025914) AGK (ENSSHAG00000017516) TMEM178B (ENSSHAG00000023304) MRPS33 (ENSSHAG00000020653) BRAF (ENSSHAG00000016011) ADCK2 (ENSSHAG00000015880) DENND2A (ENSSHAG00000015503) ENSSHAG00000015298 ##22 RAB19 (ENSSHAG00000015109) ENSSHAG00000014941 KDM7A (ENSSHAG00000014241) PARP12 (ENSSHAG00000014045) TBXAS1 (ENSSHAG00000013042) HIPK2 (ENSSHAG00000011202) CLEC2L (ENSSHAG00000011041) ENSSHAG00000024841 FMC1 (ENSSHAG00000032213) ENSSHAG00000010060 UBN2 (ENSSHAG00000008781) TTC26 (ENSSHAG00000008027) ENSSHAG00000024022 ENSSHAG00000005831 KIAA1549 (ENSSHAG00000001717) Platypus MODERN SPECIES 2 TTC26 (ENSOANG00000005994) FMC1 (ENSOANG00000037156) LUC7L2 (ENSOANG00000002993) ENSOANG00000045152 ETV6 (ENSOANG00000014578) ENSOANG00000045395 ENSOANG00000045776 GPR19 (ENSOANG00000046830) CREBL2 (ENSOANG00000040260) DUSP16 (ENSOANG00000000734) BORCS5 (ENSOANG00000046805) ENSOANG00000000732 LRP6 (ENSOANG00000006877) ENSOANG00000050128 ENSOANG00000040141 ENSOANG00000036338 ##22 RAB19 (ENSOANG00000040262) ENSOANG00000003793 KDM7A (ENSOANG00000003792) ENSOANG00000005615 ENSOANG00000050329 TRIM24 (ENSOANG00000003791) SVOPL (ENSOANG00000003790) ATP6V0A4 (ENSOANG00000000430) ENSOANG00000041239 HIPK2 (ENSOANG00000042598) TBXAS1 (ENSOANG00000008454) PARP12 (ENSOANG00000038176) ENSOANG00000048349 PANX3 (ENSOANG00000011224) ENSOANG00000015189 Sauria ANCESTRAL SPECIES 4 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00940000177916 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.c ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 Lepidosauria ANCESTRAL SPECIES 3 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00940000177916 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.c ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 Episquamata ANCESTRAL SPECIES 3 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00940000177916 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.c ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 Toxicofera ANCESTRAL SPECIES 7 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00940000177916 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.c ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a.r.a ENSGT00950000182881.a.a.a.r.b ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a Elapidae ANCESTRAL SPECIES 6 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00940000177916 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000165554 ENSGT00940000158039.c ENSGT00940000165307.c ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a.r.a ENSGT00530000063472.b.b.a.a.c ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 Indian cobra MODERN SPECIES 6 CHRM2 (ENSNNAG00000010624) PTN (ENSNNAG00000010616) DGKI (ENSNNAG00000009003) CREB3L2 (ENSNNAG00000008822) SSBP1 (ENSNNAG00000008797) WEE2 (ENSNNAG00000008761) DENND11 (ENSNNAG00000008688) AGK (ENSNNAG00000008638) ENSNNAG00000008581 TMEM178B (ENSNNAG00000008555) MRPS33 (ENSNNAG00000008535) BRAF (ENSNNAG00000007678) NDUFB2 (ENSNNAG00000007603) ADCK2 (ENSNNAG00000017249) DENND2A (ENSNNAG00000017215) ENSNNAG00000017195 ##22 RAB19 (ENSNNAG00000017175) ENSNNAG00000017165 ENSNNAG00000017156 ENSNNAG00000017152 ENSNNAG00000017103 ENSNNAG00000017059 ENSNNAG00000017042 AKR1D1 (ENSNNAG00000016954) TRIM24 (ENSNNAG00000016763) SVOPL (ENSNNAG00000016721) ENSNNAG00000016612 ENSNNAG00000016594 ENSNNAG00000016587 ENSNNAG00000016581 HIPK2 (ENSNNAG00000016567) Elapidae_a ANCESTRAL SPECIES 1 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00940000177916 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000165554 ENSGT00940000158039.c ENSGT00940000165307.c ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a.r.a ENSGT00530000063472.b.b.a.a.c ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00940000177916 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000165554 ENSGT00940000158039.c ENSGT00940000165307.c ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a.r.a ENSGT00530000063472.b.b.a.a.c ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 Mainland tiger snake MODERN SPECIES 6 PTN (ENSNSUG00000013712) DGKI (ENSNSUG00000013708) CREB3L2 (ENSNSUG00000013698) SSBP1 (ENSNSUG00000013697) WEE2 (ENSNSUG00000013696) DENND11 (ENSNSUG00000013695) AGK (ENSNSUG00000013693) ENSNSUG00000013692 TMEM178B (ENSNSUG00000013690) MRPS33 (ENSNSUG00000013689) BRAF (ENSNSUG00000013684) NDUFB2 (ENSNSUG00000013683) ADCK2 (ENSNSUG00000013679) ENSNSUG00000013676 DENND2A (ENSNSUG00000013674) ENSNSUG00000013670 ##22 RAB19 (ENSNSUG00000013618) KDM7A (ENSNSUG00000013609) ENSNSUG00000013601 ENSNSUG00000013599 AKR1D1 (ENSNSUG00000013597) ENSNSUG00000013595 TRIM24 (ENSNSUG00000013577) SVOPL (ENSNSUG00000013571) ATP6V0A4 (ENSNSUG00000013546) KIAA1549 (ENSNSUG00000013545) HIPK2 (ENSNSUG00000013543) TBXAS1 (ENSNSUG00000013542) ENSNSUG00000013541 ENSNSUG00000013540 MYBPC1 (ENSNSUG00000013539) Eastern brown snake MODERN SPECIES FAM180A (ENSPTXG00000007112) MTPN (ENSPTXG00000007115) CHRM2 (ENSPTXG00000007117) PTN (ENSPTXG00000007119) DGKI (ENSPTXG00000007126) CREB3L2 (ENSPTXG00000007157) SSBP1 (ENSPTXG00000007159) WEE2 (ENSPTXG00000007160) DENND11 (ENSPTXG00000007161) AGK (ENSPTXG00000007163) TMEM178B (ENSPTXG00000007164) BRAF (ENSPTXG00000007167) NDUFB2 (ENSPTXG00000007361) ADCK2 (ENSPTXG00000007362) DENND2A (ENSPTXG00000007363) ENSPTXG00000007364 ##22 RAB19 (ENSPTXG00000007365) ENSPTXG00000007366 KDM7A (ENSPTXG00000007367) ENSPTXG00000007369 ENSPTXG00000007370 AKR1D1 (ENSPTXG00000007371) TRIM24 (ENSPTXG00000007373) SVOPL (ENSPTXG00000007573) ATP6V0A4 (ENSPTXG00000007574) ENSPTXG00000007640 ENSPTXG00000007642 HIPK2 (ENSPTXG00000007643) TBXAS1 (ENSPTXG00000007645) PARP12 (ENSPTXG00000007649) SPIC (ENSPTXG00000007652) Blue-lipped sea krait MODERN SPECIES 9459 ENSLLTG00000015152 ##22 RAB19 (ENSLLTG00000015161) Lizard MODERN SPECIES 4 ENSACAG00000011643 ENSACAG00000035765 SSBP1 (ENSACAG00000011577) WEE2 (ENSACAG00000011522) ENSACAG00000036864 DENND11 (ENSACAG00000011486) AGK (ENSACAG00000011373) ENSACAG00000035648 TMEM178B (ENSACAG00000011370) MRPS33 (ENSACAG00000035383) ENSACAG00000037471 BRAF (ENSACAG00000011178) ADCK2 (ENSACAG00000011163) DENND2A (ENSACAG00000011024) ENSACAG00000029506 ENSACAG00000010934 ##22 ENSACAG00000043454 RAB19 (ENSACAG00000040946) SLC37A3 (ENSACAG00000012773) KDM7A (ENSACAG00000012823) ENSACAG00000012932 ENSACAG00000013165 ENSACAG00000043155 ENSACAG00000013357 TRIM24 (ENSACAG00000013480) ENSACAG00000013585 ENSACAG00000013633 ENSACAG00000035062 ENSACAG00000011779 ENSACAG00000011816 CALD1 (ENSACAG00000011851) Laterata ANCESTRAL SPECIES 6 ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000165554 ENSGT00940000158039 ENSGT00940000165307.c ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 Common wall lizard MODERN SPECIES 1 SSBP1 (ENSPMRG00000013598) WEE2 (ENSPMRG00000013583) ENSPMRG00000013577 DENND11 (ENSPMRG00000013566) ENSPMRG00000013560 AGK (ENSPMRG00000013522) ENSPMRG00000013504 ENSPMRG00000013496 TMEM178B (ENSPMRG00000013493) MRPS33 (ENSPMRG00000013489) BRAF (ENSPMRG00000013063) ENSPMRG00000013004 ENSPMRG00000013000 ADCK2 (ENSPMRG00000012996) ENSPMRG00000012983 ENSPMRG00000012968 ##22 RAB19 (ENSPMRG00000012958) ENSPMRG00000012948 KDM7A (ENSPMRG00000012935) ENSPMRG00000012921 ENSPMRG00000012915 AKR1D1 (ENSPMRG00000012907) ENSPMRG00000012905 TRIM24 (ENSPMRG00000012899) SVOPL (ENSPMRG00000012883) ATP6V0A4 (ENSPMRG00000012841) ENSPMRG00000012828 KIAA1549 (ENSPMRG00000012806) HIPK2 (ENSPMRG00000012795) TBXAS1 (ENSPMRG00000012789) PARP12 (ENSPMRG00000012781) Argentine black and white tegu MODERN SPECIES 6 ENSSMRG00000016152 DGKI (ENSSMRG00000016019) CREB3L2 (ENSSMRG00000016018) SSBP1 (ENSSMRG00000016017) WEE2 (ENSSMRG00000016016) DENND11 (ENSSMRG00000016015) AGK (ENSSMRG00000016014) ENSSMRG00000016013 TMEM178B (ENSSMRG00000016011) MRPS33 (ENSSMRG00000016009) BRAF (ENSSMRG00000016008) NDUFB2 (ENSSMRG00000016007) ENSSMRG00000016006 ADCK2 (ENSSMRG00000016005) DENND2A (ENSSMRG00000016004) ENSSMRG00000016002 ##22 RAB19 (ENSSMRG00000016001) ENSSMRG00000016000 KDM7A (ENSSMRG00000015999) ENSSMRG00000015998 ENSSMRG00000015997 AKR1D1 (ENSSMRG00000015996) TRIM24 (ENSSMRG00000015993) SVOPL (ENSSMRG00000015992) ATP6V0A4 (ENSSMRG00000015991) KIAA1549 (ENSSMRG00000015989) HIPK2 (ENSSMRG00000015988) ENSSMRG00000015987 TBXAS1 (ENSSMRG00000015985) PARP12 (ENSSMRG00000015984) MYBPC1 (ENSSMRG00000015983) tuatara MODERN SPECIES 11 ENSSPUG00000004772 ENSSPUG00000004763 PTN (ENSSPUG00000004749) DGKI (ENSSPUG00000004569) CREB3L2 (ENSSPUG00000004512) SSBP1 (ENSSPUG00000004501) WEE2 (ENSSPUG00000004377) DENND11 (ENSSPUG00000004337) AGK (ENSSPUG00000004322) TMEM178B (ENSSPUG00000004311) MRPS33 (ENSSPUG00000004275) BRAF (ENSSPUG00000004226) NDUFB2 (ENSSPUG00000004211) DENND2A (ENSSPUG00000004116) ENSSPUG00000004065 ENSSPUG00000004045 ##22 RAB19 (ENSSPUG00000004019) ENSSPUG00000003997 ENSSPUG00000003977 ENSSPUG00000003965 ENSSPUG00000003952 AKR1D1 (ENSSPUG00000003905) SVOPL (ENSSPUG00000003860) TRIM24 (ENSSPUG00000003474) Archelosauria ANCESTRAL SPECIES 3 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.c ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 Archosauria ANCESTRAL SPECIES 4 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 ENSGT00950000183117.a.a Aves ANCESTRAL SPECIES 1 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 ENSGT00950000183117.a.a Neognathae ANCESTRAL SPECIES 3 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 ENSGT00950000183117.a.a Neognathae_b ANCESTRAL SPECIES 2 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 ENSGT00950000183117.a.a Passeriformes ANCESTRAL SPECIES 3 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00960000190286 ENSGT00940000155180.b ENSGT00940000163946 ENSGT00940000160821 ENSGT00940000157821 ENSGT00390000010229 ENSGT00940000153414.A ENSGT00940000159401 ENSGT00960000189377 Great tit MODERN SPECIES 10 TTLL1 (ENSPMJG00000009534) ENSPMJG00000009532 MCAT (ENSPMJG00000009519) TSPO (ENSPMJG00000009518) TTLL12 (ENSPMJG00000009514) SCUBE1 (ENSPMJG00000009504) MPPED1 (ENSPMJG00000009477) TMEM178B (ENSPMJG00000009458) MRPS33 (ENSPMJG00000009457) BRAF (ENSPMJG00000009455) NDUFB2 (ENSPMJG00000009449) ENSPMJG00000009447 ADCK2 (ENSPMJG00000009417) DENND2A (ENSPMJG00000009410) ENSPMJG00000009407 ENSPMJG00000009406 ##22 RAB19 (ENSPMJG00000009404) SLC37A3 (ENSPMJG00000009384) KDM7A (ENSPMJG00000009352) ENSPMJG00000009351 ENSPMJG00000009350 AKR1D1 (ENSPMJG00000009349) TRIM24 (ENSPMJG00000009335) ENSPMJG00000009332 CCND2 (ENSPMJG00000009319) ENSPMJG00000009252 FGF23 (ENSPMJG00000009251) FGF6 (ENSPMJG00000009249) C12orf4 (ENSPMJG00000009248) RAD51AP1 (ENSPMJG00000009247) DYRK4 (ENSPMJG00000009242) Passeriformes_d ANCESTRAL SPECIES 3 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00960000190286 ENSGT00940000155180.b ENSGT00940000163946 ENSGT00940000160821 ENSGT00940000157821 ENSGT00390000010229 ENSGT00940000153414.A ENSGT00940000159401 ENSGT00960000189377.a Flycatcher MODERN SPECIES 10 ENSFALG00000003818 ENSFALG00000027563 ENSFALG00000003800 MRPS33 (ENSFALG00000028609) TMEM178B (ENSFALG00000003797) AGK (ENSFALG00000003794) DENND11 (ENSFALG00000003784) WEE2 (ENSFALG00000003781) ENSFALG00000003767 BRAF (ENSFALG00000003761) NDUFB2 (ENSFALG00000003758) ENSFALG00000003752 ADCK2 (ENSFALG00000003739) DENND2A (ENSFALG00000003734) ENSFALG00000003727 ENSFALG00000003717 ##22 RAB19 (ENSFALG00000003709) SLC37A3 (ENSFALG00000003695) KDM7A (ENSFALG00000003684) ENSFALG00000003681 ENSFALG00000003671 ENSFALG00000003668 ENSFALG00000025384 DYRK4 (ENSFALG00000001938) RAD51AP1 (ENSFALG00000022882) C12orf4 (ENSFALG00000001942) FGF6 (ENSFALG00000026218) FGF23 (ENSFALG00000001945) ENSFALG00000027592 CCND2 (ENSFALG00000025684) ENSFALG00000027101 Passeriformes_g ANCESTRAL SPECIES 4 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000155180.b ENSGT00390000013224 ENSGT00940000160821 ENSGT00940000163946 ENSGT00940000157821 ENSGT00390000010229 ENSGT00940000153414.A ENSGT00940000159401 ENSGT00960000189377.a Passeroidea ANCESTRAL SPECIES 3 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000155180.b ENSGT00940000163946 ENSGT00940000160821 ENSGT00940000157821 ENSGT00390000010229 ENSGT00940000153414.A ENSGT00940000159401 ENSGT00960000189377.a ENSGT00960000189377.b Zebra finch MODERN SPECIES 11 PTN (ENSTGUG00000025134) DGKI (ENSTGUG00000011563) ENSTGUG00000023751 CREB3L2 (ENSTGUG00000011582) WEE2 (ENSTGUG00000011610) DENND11 (ENSTGUG00000026574) AGK (ENSTGUG00000011620) TMEM178B (ENSTGUG00000021845) MRPS33 (ENSTGUG00000025159) BRAF (ENSTGUG00000011632) NDUFB2 (ENSTGUG00000011643) ENSTGUG00000028008 ADCK2 (ENSTGUG00000011650) DENND2A (ENSTGUG00000011656) ENSTGUG00000011666 ENSTGUG00000011669 ##22 RAB19 (ENSTGUG00000025518) SLC37A3 (ENSTGUG00000011676) KDM7A (ENSTGUG00000011686) ENSTGUG00000011698 SLCO1A2 (ENSTGUG00000011705) IAPP (ENSTGUG00000011714) ENSTGUG00000011716 ENSTGUG00000027063 ENSTGUG00000026550 ENSTGUG00000011719 PYROXD1 (ENSTGUG00000011720) RECQL (ENSTGUG00000011730) GOLT1B (ENSTGUG00000029429) BCAT1 (ENSTGUG00000011740) SOX5 (ENSTGUG00000011749) Common canary MODERN SPECIES 26 ENSSCAG00000009914 ENSSCAG00000009868 CREB3L2 (ENSSCAG00000009853) ENSSCAG00000009847 SSBP1 (ENSSCAG00000009843) WEE2 (ENSSCAG00000009838) DENND11 (ENSSCAG00000009835) AGK (ENSSCAG00000009830) TMEM178B (ENSSCAG00000009826) MRPS33 (ENSSCAG00000009824) BRAF (ENSSCAG00000009820) NDUFB2 (ENSSCAG00000009816) ADCK2 (ENSSCAG00000009793) DENND2A (ENSSCAG00000009777) ENSSCAG00000009762 ENSSCAG00000009754 ##22 RAB19 (ENSSCAG00000009751) SLC37A3 (ENSSCAG00000009707) KDM7A (ENSSCAG00000009690) ENSSCAG00000009680 AKR1D1 (ENSSCAG00000009652) TRIM24 (ENSSCAG00000009594) CCND2 (ENSSCAG00000009545) FGF23 (ENSSCAG00000009542) ENSSCAG00000009536 FGF6 (ENSSCAG00000009527) C12orf4 (ENSSCAG00000009518) RAD51AP1 (ENSSCAG00000009505) ENSSCAG00000009496 ENSSCAG00000009486 ENSSCAG00000009484 Medium ground finch MODERN SPECIES 117 DGKI (ENSGFOG00000014778) CREB3L2 (ENSGFOG00000014784) SSBP1 (ENSGFOG00000014786) WEE2 (ENSGFOG00000014787) DENND11 (ENSGFOG00000014788) AGK (ENSGFOG00000014789) TMEM178B (ENSGFOG00000014791) MRPS33 (ENSGFOG00000014792) ENSGFOG00000001977 ENSGFOG00000001987 ENSGFOG00000002004 ADCK2 (ENSGFOG00000002010) DENND2A (ENSGFOG00000002024) ENSGFOG00000002049 ENSGFOG00000002093 ##22 RAB19 (ENSGFOG00000002113) SLC37A3 (ENSGFOG00000002141) KDM7A (ENSGFOG00000002467) ENSGFOG00000002623 AKR1D1 (ENSGFOG00000002661) TRIM24 (ENSGFOG00000002695) CCND2 (ENSGFOG00000002903) TIGAR (ENSGFOG00000002919) FGF23 (ENSGFOG00000002938) ENSGFOG00000002952 ENSGFOG00000002963 C12orf4 (ENSGFOG00000002973) RAD51AP1 (ENSGFOG00000003010) DYRK4 (ENSGFOG00000003048) ENSGFOG00000003173 Neognathae_c ANCESTRAL SPECIES ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT01050000245630 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 ENSGT00950000183117.a.a Kakapo MODERN SPECIES 20 CHRM2 (ENSSHBG00005010341) PTN (ENSSHBG00005010383) DGKI (ENSSHBG00005010562) CREB3L2 (ENSSHBG00005011766) SSBP1 (ENSSHBG00005011885) WEE2 (ENSSHBG00005012149) DENND11 (ENSSHBG00005012213) AGK (ENSSHBG00005012231) TMEM178B (ENSSHBG00005012267) MRPS33 (ENSSHBG00005012281) BRAF (ENSSHBG00005012383) NDUFB2 (ENSSHBG00005012798) ENSSHBG00005012823 ADCK2 (ENSSHBG00005012850) DENND2A (ENSSHBG00005012896) ENSSHBG00005012917 ##22 RAB19 (ENSSHBG00005012935) ENSSHBG00005012952 KDM7A (ENSSHBG00005013004) ENSSHBG00005013071 AKR1D1 (ENSSHBG00005013085) TRIM24 (ENSSHBG00005013107) SVOPL (ENSSHBG00005013130) ATP6V0A4 (ENSSHBG00005013208) KIAA1549 (ENSSHBG00005014276) HIPK2 (ENSSHBG00005014298) TBXAS1 (ENSSHBG00005014330) ENSSHBG00005014453 ENSSHBG00005014464 SPIC (ENSSHBG00005014479) MYBPC1 (ENSSHBG00005014492) Golden eagle MODERN SPECIES 8 CHRM2 (ENSACCG00020008489) PTN (ENSACCG00020008475) DGKI (ENSACCG00020008164) CREB3L2 (ENSACCG00020007837) WEE2 (ENSACCG00020007800) DENND11 (ENSACCG00020007751) AGK (ENSACCG00020007730) TMEM178B (ENSACCG00020007712) MRPS33 (ENSACCG00020007704) BRAF (ENSACCG00020007597) ENSACCG00020007521 ENSACCG00020007499 ADCK2 (ENSACCG00020007476) DENND2A (ENSACCG00020007456) ENSACCG00020007433 ENSACCG00020007414 ##22 RAB19 (ENSACCG00020007396) ENSACCG00020007371 KDM7A (ENSACCG00020007349) ENSACCG00020007316 AKR1D1 (ENSACCG00020007295) TRIM24 (ENSACCG00020007263) SVOPL (ENSACCG00020007239) ATP6V0A4 (ENSACCG00020007216) KIAA1549 (ENSACCG00020007178) HIPK2 (ENSACCG00020007136) TBXAS1 (ENSACCG00020007111) PARP12 (ENSACCG00020007090) SPIC (ENSACCG00020007075) MYBPC1 (ENSACCG00020007046) CHPT1 (ENSACCG00020007007) Galloanserae ANCESTRAL SPECIES 3 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 ENSGT00950000183117.a.a Phasianidae ANCESTRAL SPECIES ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961.k ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903.c ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 ENSGT00950000183117.a.a Japanese quail MODERN SPECIES CHRM2 (ENSCJPG00005020252) PTN (ENSCJPG00005020254) DGKI (ENSCJPG00005020258) CREB3L2 (ENSCJPG00005020261) SSBP1 (ENSCJPG00005020262) WEE2 (ENSCJPG00005020263) DENND11 (ENSCJPG00005020264) AGK (ENSCJPG00005020266) TMEM178B (ENSCJPG00005020271) MRPS33 (ENSCJPG00005020274) BRAF (ENSCJPG00005020278) NDUFB2 (ENSCJPG00005020280) ENSCJPG00005020281 ADCK2 (ENSCJPG00005020282) DENND2A (ENSCJPG00005020283) ENSCJPG00005020284 ##22 RAB19 (ENSCJPG00005020285) ENSCJPG00005020286 KDM7A (ENSCJPG00005020287) ENSCJPG00005020289 AKR1D1 (ENSCJPG00005020290) TRIM24 (ENSCJPG00005020292) SVOPL (ENSCJPG00005020293) ATP6V0A4 (ENSCJPG00005020294) KIAA1549 (ENSCJPG00005020295) HIPK2 (ENSCJPG00005020296) TBXAS1 (ENSCJPG00005020297) PARP12 (ENSCJPG00005020298) SPIC (ENSCJPG00005020299) MYBPC1 (ENSCJPG00005020301) CHPT1 (ENSCJPG00005020339) Phasianidae_b ANCESTRAL SPECIES ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961.k ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903.c ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 ENSGT00950000183117.a.a Chicken MODERN SPECIES DGKI (ENSGALG00010013757) CREB3L2 (ENSGALG00010013690) SSBP1 (ENSGALG00010013625) WEE2 (ENSGALG00010013595) DENND11 (ENSGALG00010013572) AGK (ENSGALG00010013561) TMEM178B (ENSGALG00010013523) ENSGALG00010013519 MRPS33 (ENSGALG00010013510) BRAF (ENSGALG00010013466) NDUFB2 (ENSGALG00010013416) ENSGALG00010013404 ADCK2 (ENSGALG00010013393) DENND2A (ENSGALG00010013381) ENSGALG00010013362 MKRN4P (ENSGALG00010013348) ##22 RAB19 (ENSGALG00010013337) SLC37A3 (ENSGALG00010013328) KDM7A (ENSGALG00010013316) ENSGALG00010013309 AKR1D1 (ENSGALG00010013290) TRIM24 (ENSGALG00010013244) SVOPL (ENSGALG00010013237) ATP6V0A4 (ENSGALG00010013224) KIAA1549 (ENSGALG00010013209) HIPK2 (ENSGALG00010013175) TBXAS1 (ENSGALG00010013152) PARP12 (ENSGALG00010013063) SPIC (ENSGALG00010011308) MYBPC1 (ENSGALG00010011558) CHPT1 (ENSGALG00010011484) Turkey MODERN SPECIES ENSMGAG00000013107 ENSMGAG00000013115 ENSMGAG00000013110 ENSMGAG00000018959 ENSMGAG00000013120 ENSMGAG00000013129 ENSMGAG00000013126 ENSMGAG00000021965 ENSMGAG00000022285 ENSMGAG00000013146 ENSMGAG00000013151 ENSMGAG00000013191 ENSMGAG00000013172 ENSMGAG00000013157 ENSMGAG00000013196 ENSMGAG00000013208 ##22 ENSMGAG00000013205 ENSMGAG00000021516 ENSMGAG00000019620 ENSMGAG00000013210 ADCK2 (ENSMGAG00000013216) ENSMGAG00000021239 ENSMGAG00000018632 ENSMGAG00000018064 ENSMGAG00000013219 MRPS33 (ENSMGAG00000013231) ENSMGAG00000013232 ENSMGAG00000013234 ENSMGAG00000021045 ENSMGAG00000013239 ENSMGAG00000013242 Anatidae ANCESTRAL SPECIES 8 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000012348 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163296 ENSGT00940000158039 ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 ENSGT00950000183117.a.a Pink-footed goose MODERN SPECIES 24 CHRM2 (ENSABRG00000017352) PTN (ENSABRG00000017354) DGKI (ENSABRG00000000869) CREB3L2 (ENSABRG00000003557) SSBP1 (ENSABRG00000003596) WEE2 (ENSABRG00000003623) DENND11 (ENSABRG00000003684) AGK (ENSABRG00000003698) TMEM178B (ENSABRG00000003726) ENSABRG00000003734 MRPS33 (ENSABRG00000003738) BRAF (ENSABRG00000003775) NDUFB2 (ENSABRG00000004762) ADCK2 (ENSABRG00000004766) DENND2A (ENSABRG00000004815) ENSABRG00000005237 ##22 RAB19 (ENSABRG00000005252) SLC37A3 (ENSABRG00000005274) KDM7A (ENSABRG00000005332) ENSABRG00000005418 AKR1D1 (ENSABRG00000005459) TRIM24 (ENSABRG00000005474) SVOPL (ENSABRG00000005492) ATP6V0A4 (ENSABRG00000005595) KIAA1549 (ENSABRG00000006155) HIPK2 (ENSABRG00000006197) TBXAS1 (ENSABRG00000006299) PARP12 (ENSABRG00000006361) SPIC (ENSABRG00000006376) MYBPC1 (ENSABRG00000006470) CHPT1 (ENSABRG00000007749) Duck MODERN SPECIES ENSAPLG00000012073 CREB3L2 (ENSAPLG00000012813) SSBP1 (ENSAPLG00000013244) WEE2 (ENSAPLG00000013332) DENND11 (ENSAPLG00000014033) AGK (ENSAPLG00000014517) ENSAPLG00000024945 TMEM178B (ENSAPLG00000023717) MRPS33 (ENSAPLG00000018693) BRAF (ENSAPLG00000015187) NDUFB2 (ENSAPLG00000017148) ENSAPLG00000016818 ADCK2 (ENSAPLG00000015876) DENND2A (ENSAPLG00000015883) ENSAPLG00000016136 ENSAPLG00000016256 ##22 RAB19 (ENSAPLG00000016306) SLC37A3 (ENSAPLG00000016319) KDM7A (ENSAPLG00000016389) ENSAPLG00000016444 AKR1D1 (ENSAPLG00000002867) TRIM24 (ENSAPLG00000003731) SVOPL (ENSAPLG00000004468) ATP6V0A4 (ENSAPLG00000004825) KIAA1549 (ENSAPLG00000005594) HIPK2 (ENSAPLG00000006030) TBXAS1 (ENSAPLG00000006656) PARP12 (ENSAPLG00000006979) SPIC (ENSAPLG00000007075) MYBPC1 (ENSAPLG00000007103) CHPT1 (ENSAPLG00000001976) African ostrich MODERN SPECIES 771 FAM180A (ENSSCUG00000017657) MTPN (ENSSCUG00000017659) CHRM2 (ENSSCUG00000017664) PTN (ENSSCUG00000017667) DGKI (ENSSCUG00000017670) CREB3L2 (ENSSCUG00000017675) SSBP1 (ENSSCUG00000017678) WEE2 (ENSSCUG00000017681) DENND11 (ENSSCUG00000017682) AGK (ENSSCUG00000017683) MRPS33 (ENSSCUG00000017685) BRAF (ENSSCUG00000017689) ENSSCUG00000017692 DENND2A (ENSSCUG00000017693) ENSSCUG00000017694 ENSSCUG00000017699 ##22 RAB19 (ENSSCUG00000017701) SLC37A3 (ENSSCUG00000017702) KDM7A (ENSSCUG00000017704) ENSSCUG00000017705 AKR1D1 (ENSSCUG00000017707) TRIM24 (ENSSCUG00000017713) SVOPL (ENSSCUG00000017715) ENSSCUG00000017716 ENSSCUG00000017717 KIAA1549 (ENSSCUG00000017719) HIPK2 (ENSSCUG00000017723) TBXAS1 (ENSSCUG00000017729) PARP12 (ENSSCUG00000017734) SPIC (ENSSCUG00000017737) MYBPC1 (ENSSCUG00000017759) Australian saltwater crocodile MODERN SPECIES 49 CHRM2 (ENSCPRG00005017908) PTN (ENSCPRG00005017909) DGKI (ENSCPRG00005017914) CREB3L2 (ENSCPRG00005017921) SSBP1 (ENSCPRG00005017927) WEE2 (ENSCPRG00005017929) DENND11 (ENSCPRG00005017935) AGK (ENSCPRG00005017939) TMEM178B (ENSCPRG00005017944) MRPS33 (ENSCPRG00005017949) BRAF (ENSCPRG00005017954) NDUFB2 (ENSCPRG00005017962) ENSCPRG00005017974 ADCK2 (ENSCPRG00005017976) DENND2A (ENSCPRG00005017981) ENSCPRG00005017990 ##22 RAB19 (ENSCPRG00005017994) ENSCPRG00005017995 KDM7A (ENSCPRG00005017999) ENSCPRG00005018007 ENSCPRG00005018016 ENSCPRG00005018017 TRIM24 (ENSCPRG00005018061) SVOPL (ENSCPRG00005018135) ENSCPRG00005018136 ENSCPRG00005018137 KIAA1549 (ENSCPRG00005018140) HIPK2 (ENSCPRG00005018144) TBXAS1 (ENSCPRG00005018151) PARP12 (ENSCPRG00005018170) SPIC (ENSCPRG00005018174) Cryptodira ANCESTRAL SPECIES 10 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000165307.c ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 Testudinoidea ANCESTRAL SPECIES 4 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044.k ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000165307.c ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 Testudinidae ANCESTRAL SPECIES 14 ENSGT00430000031071 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401 ENSGT00940000156154 ENSGT00390000004044.k ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000165307.c ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 Abingdon island giant tortoise MODERN SPECIES 929 PTN (ENSCABG00000000869) ENSCABG00000000868 DGKI (ENSCABG00000000404) ENSCABG00000000243 SSBP1 (ENSCABG00000000210) WEE2 (ENSCABG00000000152) DENND11 (ENSCABG00000000072) AGK (ENSCABG00000022232) ENSCABG00000022230 TMEM178B (ENSCABG00000022226) MRPS33 (ENSCABG00000022225) BRAF (ENSCABG00000022223) ENSCABG00000022221 ADCK2 (ENSCABG00000022219) DENND2A (ENSCABG00000022217) ENSCABG00000022213 ##22 RAB19 (ENSCABG00000022199) ENSCABG00000022198 ENSCABG00000022197 KDM7A (ENSCABG00000022196) ENSCABG00000022195 ENSCABG00000022192 Goode s thornscrub tortoise MODERN SPECIES DGKI (ENSGEVG00005019959) ENSGEVG00005020039 ENSGEVG00005020046 SSBP1 (ENSGEVG00005020064) WEE2 (ENSGEVG00005020080) DENND11 (ENSGEVG00005008685) AGK (ENSGEVG00005008746) ENSGEVG00005008785 TMEM178B (ENSGEVG00005008814) MRPS33 (ENSGEVG00005008859) BRAF (ENSGEVG00005008906) NDUFB2 (ENSGEVG00005008991) ENSGEVG00005009033 ADCK2 (ENSGEVG00005009085) DENND2A (ENSGEVG00005009172) ENSGEVG00005009419 ##22 RAB19 (ENSGEVG00005009493) ENSGEVG00005009537 KDM7A (ENSGEVG00005009590) ENSGEVG00005009727 ENSGEVG00005010083 AKR1D1 (ENSGEVG00005010340) TRIM24 (ENSGEVG00005010514) SVOPL (ENSGEVG00005010594) ATP6V0A4 (ENSGEVG00005010762) KIAA1549 (ENSGEVG00005010970) HIPK2 (ENSGEVG00005011259) TBXAS1 (ENSGEVG00005012172) PARP12 (ENSGEVG00005012232) SPIC (ENSGEVG00005012359) MYBPC1 (ENSGEVG00005012504) Emydidae ANCESTRAL SPECIES 5 ENSGT00940000158940 ENSGT00390000007640.a ENSGT00940000158094 ENSGT00940000157659 ENSGT00390000002796 ENSGT00940000158803 ENSGT00590000083189 ENSGT00940000154961 ENSGT00390000015299.a.b.b.a ENSGT00390000011401.a ENSGT00940000156154 ENSGT00390000004044.k ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000163139 ENSGT00940000158039 ENSGT00940000165307.c ENSGT00940000165307.d ENSGT00940000155961 ENSGT00940000159863 ENSGT00940000158632 ENSGT00950000182881.a.a.a ENSGT00530000063472.b.b.a.a ENSGT00940000157742 ENSGT00940000157903 ENSGT00940000154649.B ENSGT00940000155067.a ENSGT00940000158254 Three-toed box turtle MODERN SPECIES 118 MTPN (ENSTMTG00000021764) CHRM2 (ENSTMTG00000021762) PTN (ENSTMTG00000021755) DGKI (ENSTMTG00000021578) CREB3L2 (ENSTMTG00000021553) SSBP1 (ENSTMTG00000021544) WEE2 (ENSTMTG00000021535) DENND11 (ENSTMTG00000021527) AGK (ENSTMTG00000021483) TMEM178B (ENSTMTG00000021466) MRPS33 (ENSTMTG00000021462) BRAF (ENSTMTG00000021261) ENSTMTG00000021230 ADCK2 (ENSTMTG00000021204) DENND2A (ENSTMTG00000021170) ENSTMTG00000021160 ##22 RAB19 (ENSTMTG00000021071) ENSTMTG00000021046 KDM7A (ENSTMTG00000021038) ENSTMTG00000021003 ENSTMTG00000020978 AKR1D1 (ENSTMTG00000020970) ENSTMTG00000020965 TRIM24 (ENSTMTG00000020953) SVOPL (ENSTMTG00000020933) ATP6V0A4 (ENSTMTG00000020907) KIAA1549 (ENSTMTG00000020792) HIPK2 (ENSTMTG00000020766) TBXAS1 (ENSTMTG00000020617) PARP12 (ENSTMTG00000020602) SPIC (ENSTMTG00000020572) painted turtle MODERN SPECIES 759 DGKI (ENSCPBG00000011429) CREB3L2 (ENSCPBG00000011432) SSBP1 (ENSCPBG00000011435) WEE2 (ENSCPBG00000011436) DENND11 (ENSCPBG00000011756) AGK (ENSCPBG00000011764) TMEM178B (ENSCPBG00000011771) ENSCPBG00000011784 BRAF (ENSCPBG00000011794) ENSCPBG00000011806 ENSCPBG00000011814 ENSCPBG00000011850 ADCK2 (ENSCPBG00000011871) DENND2A (ENSCPBG00000011891) ENSCPBG00000011907 ENSCPBG00000011911 ##22 RAB19 (ENSCPBG00000011914) ENSCPBG00000011919 KDM7A (ENSCPBG00000011923) ENSCPBG00000011998 ENSCPBG00000012004 ENSCPBG00000012014 AKR1D1 (ENSCPBG00000012026) TRIM24 (ENSCPBG00000012090) SVOPL (ENSCPBG00000013351) ATP6V0A4 (ENSCPBG00000013362) KIAA1549 (ENSCPBG00000013372) HIPK2 (ENSCPBG00000013381) TBXAS1 (ENSCPBG00000013384) PARP12 (ENSCPBG00000013389) SPIC (ENSCPBG00000013392) Chinese turtle MODERN SPECIES 1880 CHRM2 (ENSPSIG00000004996) PTN (ENSPSIG00000005039) DGKI (ENSPSIG00000005205) CREB3L2 (ENSPSIG00000006461) SSBP1 (ENSPSIG00000007756) DENND11 (ENSPSIG00000008006) AGK (ENSPSIG00000008673) ENSPSIG00000011391 TMEM178B (ENSPSIG00000011409) MRPS33 (ENSPSIG00000011413) ENSPSIG00000001875 BRAF (ENSPSIG00000011427) ADCK2 (ENSPSIG00000007607) DENND2A (ENSPSIG00000007670) ENSPSIG00000008349 ENSPSIG00000008369 ##22 RAB19 (ENSPSIG00000009123) SLC37A3 (ENSPSIG00000009128) KDM7A (ENSPSIG00000010327) ENSPSIG00000010662 ENSPSIG00000012657 ENSPSIG00000014073 AKR1D1 (ENSPSIG00000014342) Anura ANCESTRAL SPECIES 53 ENSGT00390000004044 ENSGT00390000001536 ENSGT00950000182931.B.a.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000156717 ENSGT00940000165554 ENSGT00940000158039 ENSGT00940000165307.c ENSGT00390000006485.c ENSGT00940000153678.a.a ENSGT00940000163501 ENSGT00730000111305 ENSGT01010000228431 ENSGT00940000154471.a.b.a.b ENSGT00940000155765 ENSGT00940000155504 ENSGT00390000013709.b ENSGT00390000002669 ENSGT00940000162080 Frog MODERN SPECIES 3 CREB3L2 (ENSXETG00000033093) ssbp1 (ENSXETG00000020197) wee2 (ENSXETG00000031988) DENND11 (ENSXETG00000048620) agk (ENSXETG00000047267) ENSXETG00000037587 tmem178b (ENSXETG00000039625) braf (ENSXETG00000004845) hars2 (ENSXETG00000002665) ENSXETG00000031320 ndufb2 (ENSXETG00000002668) ENSXETG00000005438 adck2 (ENSXETG00000031357) dennd2a (ENSXETG00000049354) ENSXETG00000037869 mkrn1 (ENSXETG00000027117) ##22 rab19 (ENSXETG00000002673) slc37a3 (ENSXETG00000002672) kdm7a (ENSXETG00000002669) ENSXETG00000042741 sinhcaf (ENSXETG00000047885) dennd5b (ENSXETG00000002680) etfbkmt (ENSXETG00000037887) amn1 (ENSXETG00000044721) ENSXETG00000037863 resf1 (ENSXETG00000041621) bicd1 (ENSXETG00000032001) fgd4 (ENSXETG00000047264) dnm1l (ENSXETG00000012252) yars2 (ENSXETG00000012271) ttc38 (ENSXETG00000012273) Leishan spiny toad MODERN SPECIES 6 ENSLLEG00000014276 ENSLLEG00000014343 ENSLLEG00000014496 ENSLLEG00000014539 BCL2L13 (ENSLLEG00000014648) ENSLLEG00000014775 MICAL3 (ENSLLEG00000014442) ENSLLEG00000015225 ENSLLEG00000015251 ENSLLEG00000015321 ENSLLEG00000015778 ENSLLEG00000015855 ENSLLEG00000016112 ENSLLEG00000016131 ENSLLEG00000016142 ENSLLEG00000016177 ##22 ENSLLEG00000016464 ENSLLEG00000016478 ENSLLEG00000016499 ENSLLEG00000016519 ENSLLEG00000016560 ENSLLEG00000016590 ENSLLEG00000016928 ENSLLEG00000016958 ENSLLEG00000017039 DENND5B (ENSLLEG00000017117) ENSLLEG00000017255 ENSLLEG00000017322 KDM7A (ENSLLEG00000017391) ENSLLEG00000017942 ENSLLEG00000017991 Coelacanth MODERN SPECIES 399 ETV6 (ENSLACG00000002357) KIAA0930 (ENSLACG00000008762) NUP50 (ENSLACG00000009930) ENSLACG00000012140 PHF21B (ENSLACG00000012782) ARHGAP8 (ENSLACG00000013561) hdhd5 (ENSLACG00000015091) mkrn1 (ENSLACG00000015245) ##22 RAB19 (ENSLACG00000015436) ENSLACG00000015491 ENSLACG00000015789 ENSLACG00000016717 ENSLACG00000017006 MCAT (ENSLACG00000017055) TTLL1 (ENSLACG00000017190) PACSIN2 (ENSLACG00000017334) Actinopterygii ANCESTRAL SPECIES 979 ENSGT00390000007427 ENSGT00950000183077.a.a ##22 Neopterygii ANCESTRAL SPECIES 21 ENSGT00940000164299.b.b ENSGT00940000158576 ENSGT00940000161860 ENSGT00390000017181 ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068 ENSGT00940000162201.o ENSGT01030000234588.b.b.a ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018 ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a ENSGT00940000158916 ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 ENSGT00390000014353 ENSGT01050000244940.b ENSGT00940000161222 ENSGT00390000006913 Osteoglossocephalai ANCESTRAL SPECIES 48 ENSGT00940000161105 ENSGT00940000160758 ENSGT00940000164299.b.a ENSGT00940000158576.a.a ENSGT00940000161860 ENSGT00390000017181 ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068 ENSGT00940000162201.o.d ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a ENSGT00940000158916 ENSGT00390000007878 ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 ENSGT01050000244940.b ENSGT00940000165013.b.b ENSGT00940000161222 Clupeocephala ANCESTRAL SPECIES 46 ENSGT00940000161105 ENSGT00990000206310 ENSGT00940000156124.d ENSGT00940000160758 ENSGT00940000164299.b.a ENSGT00940000158576.a.a ENSGT00940000161860 ENSGT00390000017181 ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00940000156323.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000165644 ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000011980.a.i.b ENSGT00390000011980.a.i.a ENSGT00390000007878 ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 ENSGT00940000180800 Otomorpha ANCESTRAL SPECIES 72 ENSGT00940000161105 ENSGT00940000160758 ENSGT00940000164299.b.a ENSGT00940000158576.a.a ENSGT00940000161860 ENSGT00390000017181 ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a.f ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.i.b ENSGT00390000011980.a.i.a ENSGT00390000007878 ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 ENSGT00940000180800 ENSGT01050000244940.b ENSGT00940000161222 Clupeiformes ANCESTRAL SPECIES 62 ENSGT00940000154615.j ENSGT00390000004190 ENSGT00440000035348 ENSGT00940000161105 ENSGT00940000160758 ENSGT00940000164299.b.a ENSGT00940000158576.a.a ENSGT00940000161860 ENSGT00390000017181 ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a.f ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000157998 ENSGT00390000001285.i ENSGT00950000183039.A ENSGT00940000156088.c.a ENSGT00940000157212.B ENSGT00940000166983 ENSGT00990000205092.a ENSGT00390000011055 ENSGT00940000158153 ENSGT00940000160214 ENSGT00390000017998 Atlantic herring MODERN SPECIES 7 nup50 (ENSCHAG00000002974) PHF21B (ENSCHAG00000002870) ARHGAP8 (ENSCHAG00000002409) ENSCHAG00000027408 KCNA1 (ENSCHAG00000027405) KCNA5 (ENSCHAG00000027402) ENSCHAG00000027394 large1 (ENSCHAG00000027350) large1 (ENSCHAG00000027266) braf (ENSCHAG00000026762) mrps33 (ENSCHAG00000026667) tmem178bb (ENSCHAG00000026665) cnot4b (ENSCHAG00000026630) ENSCHAG00000026624 ENSCHAG00000026623 mkrn1 (ENSCHAG00000026620) ##22 TMEM121B (ENSCHAG00000026618) ENSCHAG00000026612 rab3ip (ENSCHAG00000026548) CNOT2 (ENSCHAG00000026480) KCNMB4 (ENSCHAG00000026471) ptprb (ENSCHAG00000026460) PTPRR (ENSCHAG00000026415) ENSCHAG00000026395 ENSCHAG00000026390 ENSCHAG00000026385 ENSCHAG00000026377 rps16 (ENSCHAG00000026366) ppp1r12a (ENSCHAG00000026294) pawr (ENSCHAG00000026279) syt1a (ENSCHAG00000026254) Denticle herring MODERN SPECIES 6 si:ch211-214j24.10 (ENSDCDG00000028589) osgep (ENSDCDG00000028600) apex1 (ENSDCDG00000028610) zgc:113263 (ENSDCDG00000028617) ENSDCDG00000028625 ENSDCDG00000028629 ENSDCDG00000028634 selenoo2 (ENSDCDG00000028661) ENSDCDG00000028666 large1 (ENSDCDG00000028698) large1 (ENSDCDG00000029108) braf (ENSDCDG00000029577) mrps33 (ENSDCDG00000032203) tmem178bb (ENSDCDG00000032206) cnot4b (ENSDCDG00000032210) mkrn1 (ENSDCDG00000032223) ##22 TMEM121B (ENSDCDG00000032229) ENSDCDG00000032231 rab3ip (ENSDCDG00000032249) CNOT2 (ENSDCDG00000032548) KCNMB4 (ENSDCDG00000032756) ptprb (ENSDCDG00000032777) PTPRR (ENSDCDG00000032986) ENSDCDG00000033141 ENSDCDG00000033142 ENSDCDG00000033147 TSPAN8 (ENSDCDG00000033150) LGR5 (ENSDCDG00000033166) TMEM19 (ENSDCDG00000033197) ENSDCDG00000033249 kdm6al (ENSDCDG00000034117) Otophysi ANCESTRAL SPECIES 192 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a.f ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.i.b ENSGT00390000011980.a.i.a ENSGT00390000007878 ENSGT00390000006913 ENSGT00940000161222 ENSGT00940000165013.b.a.a ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 Characiphysae ANCESTRAL SPECIES 15 ENSGT00940000163299.B.b.b.j ENSGT00940000157963 ENSGT00940000158899 ENSGT01050000244951.a.b.a.b.b ENSGT00940000153962.b ENSGT00530000063825.A.c.e ENSGT00940000154709.a.a ENSGT00940000155455.g ENSGT00940000165530.a.b ENSGT00940000156419.b ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a.f ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.i.b ENSGT00390000011980.a.i.a ENSGT00390000007878 ENSGT00390000006913 ENSGT00940000161222 ENSGT00940000165013.b.a.a ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 Characiphysae_b ANCESTRAL SPECIES 102 ENSGT00940000158899 ENSGT01050000244951.a.b.a.b.b ENSGT00940000153962.b ENSGT00530000063825.A.c.e ENSGT00940000154709.a.a ENSGT00940000155455.g ENSGT00940000165530.a.b ENSGT00940000156419.b ENSGT00390000008061.j.a ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a.f ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.i.b ENSGT00390000011980.a.i.a ENSGT00390000007878 ENSGT00390000006913 ENSGT00940000161222 ENSGT00940000165013.b.a.a ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 Characoidei ANCESTRAL SPECIES 96 ENSGT00940000158899 ENSGT01050000244951.a.b.a.b.b ENSGT00940000153962.b ENSGT00530000063825.A.c.e ENSGT00940000154709.a.a ENSGT00940000155455.g ENSGT00940000165530.a.b ENSGT00940000156419.b ENSGT00390000008061.j.a ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a.f ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.i.b ENSGT00390000011980.a.i.a ENSGT00390000007878 ENSGT00390000006913 ENSGT00940000161222 ENSGT00940000165013.b.a.a ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 Red-bellied piranha MODERN SPECIES 41 ENSPNAG00000008459 ENSPNAG00000005178 syt10 (ENSPNAG00000001045) ENSPNAG00000008523 cyb5r3 (ENSPNAG00000008543) si:dkey-222f8.3 (ENSPNAG00000008556) tnnt2c (ENSPNAG00000001084) cry1a (ENSPNAG00000006718) btbd11a (ENSPNAG00000001119) braf (ENSPNAG00000008630) mrps33 (ENSPNAG00000008638) tmem178bb (ENSPNAG00000001136) cnot4b (ENSPNAG00000008679) ENSPNAG00000008695 mkrn1 (ENSPNAG00000008708) ##22 TMEM121B (ENSPNAG00000008710) ENSPNAG00000001170 rergla (ENSPNAG00000008726) arhgef39 (ENSPNAG00000001177) ENSPNAG00000008739 lmo3 (ENSPNAG00000001182) mgst1.1 (ENSPNAG00000008768) mgst1.2 (ENSPNAG00000008774) dera (ENSPNAG00000008778) HELB (ENSPNAG00000008801) IRAK3 (ENSPNAG00000008814) b2m (ENSPNAG00000008818) hmga2 (ENSPNAG00000001209) msrb3 (ENSPNAG00000008842) lemd3 (ENSPNAG00000008855) Mexicana tetra MODERN SPECIES 22 ENSAMXG00000000922 ENSAMXG00000040305 ENSAMXG00000030640 ENSAMXG00000010368 prmt8b (ENSAMXG00000019502) tspan11 (ENSAMXG00000010362) sema3aa (ENSAMXG00000010349) ENSAMXG00000010328 ENSAMXG00000034903 ankrd16 (ENSAMXG00000010317) gdi2 (ENSAMXG00000035464) asb13a.1 (ENSAMXG00000030012) asb13a.2 (ENSAMXG00000035244) tmem178bb (ENSAMXG00000011478) cnot4b (ENSAMXG00000011473) mkrn1 (ENSAMXG00000032974) ##22 ENSAMXG00000043438 TMEM121B (ENSAMXG00000036292) ENSAMXG00000011463 rergla (ENSAMXG00000030238) arhgef39 (ENSAMXG00000011439) lmo3 (ENSAMXG00000037505) mgst1.1 (ENSAMXG00000039398) mgst1.2 (ENSAMXG00000029864) dera (ENSAMXG00000011394) ENSAMXG00000011367 IRAK3 (ENSAMXG00000011351) b2m (ENSAMXG00000039605) b2m (ENSAMXG00000011344) ENSAMXG00000031446 msrb3 (ENSAMXG00000042635) Electric eel MODERN SPECIES 58 ENSEEEG00000017284 syt10 (ENSEEEG00000017286) ENSEEEG00000017287 ENSEEEG00000017290 cyb5r3 (ENSEEEG00000017318) si:dkey-222f8.3 (ENSEEEG00000017362) tnnt2c (ENSEEEG00000017363) cry1a (ENSEEEG00000017367) btbd11a (ENSEEEG00000017533) ENSEEEG00000017536 braf (ENSEEEG00000017556) mrps33 (ENSEEEG00000017738) tmem178bb (ENSEEEG00000017739) cnot4b (ENSEEEG00000017741) ENSEEEG00000017754 mkrn1 (ENSEEEG00000017755) ##22 TMEM121B (ENSEEEG00000017757) ENSEEEG00000017762 rergla (ENSEEEG00000017769) arhgef39 (ENSEEEG00000017773) lmo3 (ENSEEEG00000017775) ENSEEEG00000017778 mgst1.2 (ENSEEEG00000017786) dera (ENSEEEG00000017787) HELB (ENSEEEG00000017794) IRAK3 (ENSEEEG00000017796) ENSEEEG00000017798 b2m (ENSEEEG00000017799) ENSEEEG00000017800 msrb3 (ENSEEEG00000017802) lemd3 (ENSEEEG00000017804) Channel catfish MODERN SPECIES 10 ENSIPUG00000017740 ENSIPUG00000017728 ENSIPUG00000017723 ENSIPUG00000017624 Cyb5r3 (ENSIPUG00000017567) si:dkey-222f8.3 (ENSIPUG00000017464) si:dkey-222f8.3 (ENSIPUG00000017413) tnnt2c (ENSIPUG00000017363) cry1a (ENSIPUG00000017249) btbd11a (ENSIPUG00000017196) braf (ENSIPUG00000017122) Mrps33 (ENSIPUG00000017102) tmem178b (ENSIPUG00000017092) cnot4b (ENSIPUG00000016994) ENSIPUG00000016980 mkrn1 (ENSIPUG00000016956) ##22 cecr6 (ENSIPUG00000016945) Il17ra (ENSIPUG00000016862) rergl (ENSIPUG00000016826) arhgef39 (ENSIPUG00000016797) lmo3 (ENSIPUG00000016756) mgst1 (ENSIPUG00000016739) dera (ENSIPUG00000016710) helb (ENSIPUG00000016651) irak3 (ENSIPUG00000016634) b2m (ENSIPUG00000016624) hmga2 (ENSIPUG00000016581) msrb3 (ENSIPUG00000016522) lemd3 (ENSIPUG00000016442) wif1 (ENSIPUG00000016380) tmbim4 (ENSIPUG00000016312) Cyprinoidei ANCESTRAL SPECIES 28 ENSGT00950000182994.B.a.b ENSGT00940000160326.c.b ENSGT00940000160326.c.a ENSGT00940000155849.h ENSGT00390000001702 ENSGT00730000111314 ENSGT00940000156419.b ENSGT00940000155455.g ENSGT00940000154709.a.a ENSGT00530000063825.A.c.e ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a.f ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000165644.f ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.i.b ENSGT00390000011980.a.i.a ENSGT00390000007878 ENSGT00390000006913 ENSGT00940000161222 ENSGT00940000165013.b.a.a ENSGT00940000163109.a ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 2 ENSGT00950000182994.B.a.b.ib ENSGT00940000160326.c.a ENSGT00940000155849.h.e ENSGT00390000001702.m.a ENSGT00730000111314 ENSGT00940000153962.b.l.b ENSGT00940000156419.b.a ENSGT00940000155455.g.a ENSGT00940000154709.a.a.h ENSGT00530000063825.A.c.e.f ENSGT00940000156154.i ENSGT00390000011401.ub ENSGT00390000015299.a.b.b.a.f.a ENSGT00390000000068.a.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a.c ##22 ENSGT00940000154822.a.b ENSGT00940000165644.f.b ENSGT00940000161146.a ENSGT00440000033863.a ENSGT00940000153908.a.g ENSGT00390000011980.a.i.b ENSGT00390000011980.a.i.a ENSGT00390000007878.l ENSGT00390000006913.i.b ENSGT00390000006913.j ENSGT00940000161222.a ENSGT00940000165013.b.a.a.c ENSGT01000000215012 ENSGT00940000163109.b ENSGT00940000155240.A.i Goldfish MODERN SPECIES 33 itfg2 (ENSCARG00000000309) recql (ENSCARG00000000390) ascl1a (ENSCARG00000000469) th2 (ENSCARG00000000577) nup37 (ENSCARG00000000985) parpbp (ENSCARG00000001013) pmch (ENSCARG00000001019) igf1 (ENSCARG00000001038) cry1a (ENSCARG00000001071) tnnt2c (ENSCARG00000001100) si:dkey-222f8.3 (ENSCARG00000001106) braf (ENSCARG00000001189) mrps33 (ENSCARG00000001570) tmem178bb (ENSCARG00000001574) cnot4b (ENSCARG00000001594) mkrn1 (ENSCARG00000001631) ##22 TMEM121B (ENSCARG00000001638) ENSCARG00000001649 rergla (ENSCARG00000001671) arhgef39 (ENSCARG00000001678) lmo3 (ENSCARG00000001688) mgst1.1 (ENSCARG00000001703) ENSCARG00000001708 mgst1.2 (ENSCARG00000001714) dera (ENSCARG00000001719) snd1 (ENSCARG00000001913) LRRC4 (ENSCARG00000004359) ENSCARG00000004367 hgfa (ENSCARG00000004392) pparaa (ENSCARG00000004463) cdkn1ba (ENSCARG00000004475) Cyprininae_a ANCESTRAL SPECIES 354 ENSGT00950000182994.B.a.b.ib ENSGT00940000160326.c.a ENSGT00940000155849.h.e ENSGT00390000001702.m.a ENSGT00730000111314 ENSGT00940000153962.b.l.b ENSGT00940000156419.b.a ENSGT00940000155455.g.a ENSGT00940000154709.a.a.h ENSGT00530000063825.A.c.e.f ENSGT00940000156154.i ENSGT00390000011401.ub ENSGT00390000015299.a.b.b.a.f.a ENSGT00390000000068.a.a.a ENSGT00940000162201.o.d.b ENSGT00950000183077.a.a.c ##22 ENSGT00940000154822.a.b ENSGT00940000165644.f.b ENSGT00940000161146.a ENSGT00440000033863.a ENSGT00940000153908.a.g ENSGT00390000011980.a.i.b.a ENSGT00390000011980.a.i.a Common carp reference MODERN SPECIES 8 net1 (ENSCCRG00000081166) mkln1 (ENSCCRG00000044893) podxl (ENSCCRG00000079437) ENSCCRG00000077222 podxl (ENSCCRG00000021228) cyb5r3 (ENSCCRG00000065651) btbd11a (ENSCCRG00000076780) cry1a (ENSCCRG00000077916) tnnt2c (ENSCCRG00000074295) si:dkey-222f8.3 (ENSCCRG00000079607) braf (ENSCCRG00000016422) mrps33 (ENSCCRG00000068537) tmem178bb (ENSCCRG00000016350) cnot4b (ENSCCRG00000016217) ENSCCRG00000016331 mkrn1 (ENSCCRG00000016101) ##22 ENSCCRG00000068066 ENSCCRG00000071533 rergla (ENSCCRG00000062704) arhgef39 (ENSCCRG00000022093) mgst1.1 (ENSCCRG00000028046) mgst1.2 (ENSCCRG00000078502) ENSCCRG00000069237 HELB (ENSCCRG00000000258) HELB (ENSCCRG00000000280) ENSCCRG00000072075 IRAK3 (ENSCCRG00000054888) HMGA2 (ENSCCRG00000079475) msrb3 (ENSCCRG00000070151) lemd3 (ENSCCRG00000036619) wif1 (ENSCCRG00000039613) Golden-line barbel MODERN SPECIES 738 asb13a.2 (ENSSGRG00000008733) net1 (ENSSGRG00000007133) ENSSGRG00000007108 mkln1 (ENSSGRG00000006985) podxl (ENSSGRG00000006984) cyb5r3 (ENSSGRG00000006687) btbd11a (ENSSGRG00000006225) cry1a (ENSSGRG00000005770) tnnt2c (ENSSGRG00000005762) si:dkey-222f8.3 (ENSSGRG00000005761) braf (ENSSGRG00000002312) mrps33 (ENSSGRG00000002282) tmem178bb (ENSSGRG00000002281) cnot4b (ENSSGRG00000001600) ENSSGRG00000001282 mkrn1 (ENSSGRG00000037661) ##22 TMEM121B (ENSSGRG00000037659) ENSSGRG00000037658 rergla (ENSSGRG00000037657) arhgef39 (ENSSGRG00000037655) Cyprininae ANCESTRAL SPECIES 223 ENSGT00620000087961.a.b.a.b.a.a ENSGT00940000153969.a.c ENSGT00950000182994.B.a.b.jb ENSGT00940000160326.c.b ENSGT00940000155849.h.f ENSGT00390000001702.m.b ENSGT00940000153962.b.l.a ENSGT00940000156419.b.b ENSGT00940000155455.g.b ENSGT00940000154709.a.a.g ENSGT00530000063825.A.c.e.e ENSGT00940000156154.j ENSGT00390000011401.tb ENSGT00390000015299.a.b.b.a.f.b ENSGT00390000000068.a.a.b ENSGT00950000183077.a.a.d ##22 ENSGT00940000154822.a.a ENSGT00940000165644.f.a ENSGT00940000161146.b ENSGT00440000033863.b ENSGT00940000153908.a.h ENSGT00390000007878.k ENSGT00390000006913.i.a ENSGT00940000161222.b ENSGT00940000165013.b.a.a.d ENSGT00940000163109.a ENSGT00940000155240.A.j ENSGT00940000157643.o ENSGT00940000160401.b ENSGT00390000014353.cb ENSGT01050000244940.b.e Goldfish DUPLICATION Goldfish MODERN SPECIES 21 sema3aa (ENSCARG00000012281) ENSCARG00000012178 gdi2 (ENSCARG00000011726) asb13a.1 (ENSCARG00000011678) net1 (ENSCARG00000011590) mkln1 (ENSCARG00000011488) cyb5r3 (ENSCARG00000011082) btbd11a (ENSCARG00000010980) cry1a (ENSCARG00000010868) tnnt2c (ENSCARG00000010836) si:dkey-222f8.3 (ENSCARG00000010821) braf (ENSCARG00000010227) mrps33 (ENSCARG00000010184) tmem178bb (ENSCARG00000010173) cnot4b (ENSCARG00000010133) mkrn1 (ENSCARG00000010065) ##22 ENSCARG00000010044 rergla (ENSCARG00000010032) e2f7 (ENSCARG00000010011) csrp2 (ENSCARG00000009996) zdhhc17 (ENSCARG00000009966) ENSCARG00000009923 ANO6 (ENSCARG00000008732) mrpl42 (ENSCARG00000008651) ENSCARG00000008618 nudt4b (ENSCARG00000008605) dnajc2 (ENSCARG00000008520) pmpcb (ENSCARG00000007920) med21 (ENSCARG00000007874) TM7SF3 (ENSCARG00000007779) fgfr1op2 (ENSCARG00000007760) Goldfish MODERN SPECIES 404 mkrn1 (ENSCARG00000021191) ##22 TMEM121B (ENSCARG00000021239) ENSCARG00000021244 Cyprininae_a ANCESTRAL SPECIES 123 ENSGT00940000153969.a.c ENSGT00950000182994.B.a.b.jb ENSGT00940000160326.c.b ENSGT00940000155849.h.f ENSGT00390000001702.m.b ENSGT00940000153962.b.l.a ENSGT00940000156419.b.b ENSGT00940000155455.g.b ENSGT00940000154709.a.a.g ENSGT00530000063825.A.c.e.e ENSGT00940000156154.j ENSGT00390000011401.tb ENSGT00390000015299.a.b.b.a.f.b ENSGT00390000000068.a.a.b ENSGT00940000162201.o.d.a ENSGT00950000183077.a.a.d ##22 ENSGT00940000154822.a.a ENSGT00940000165644.f.a ENSGT00940000161146.b ENSGT00440000033863.b ENSGT00940000153908.a.h ENSGT00390000011980.a.i.b.b ENSGT00390000007878.k ENSGT00390000006913.i.a ENSGT00940000161222.b ENSGT00940000165013.b.a.a.d ENSGT00940000163109.a ENSGT00940000155240.A.j ENSGT00940000157643.o ENSGT00940000160401.b ENSGT00390000014353.cb Common carp reference MODERN SPECIES 36 ENSCCRG00000069279 ankrd16 (ENSCCRG00000035612) gdi2 (ENSCCRG00000020991) asb13a.1 (ENSCCRG00000054229) net1 (ENSCCRG00000070124) mkln1 (ENSCCRG00000021153) cyb5r3 (ENSCCRG00000047732) btbd11a (ENSCCRG00000064579) cry1a (ENSCCRG00000071926) tnnt2c (ENSCCRG00000060066) si:dkey-222f8.3 (ENSCCRG00000046054) braf (ENSCCRG00000045169) tmem178bb (ENSCCRG00000070254) mrps33 (ENSCCRG00000064138) cnot4b (ENSCCRG00000045647) mkrn1 (ENSCCRG00000081664) ##22 ENSCCRG00000016156 ENSCCRG00000081214 il17ra1a (ENSCCRG00000016165) rergla (ENSCCRG00000066677) arhgef39 (ENSCCRG00000059910) lmo3 (ENSCCRG00000078113) mgst1.1 (ENSCCRG00000055104) dera (ENSCCRG00000056089) ENSCCRG00000042894 ENSCCRG00000011991 b2m (ENSCCRG00000016027) ENSCCRG00000054015 msrb3 (ENSCCRG00000071609) lemd3 (ENSCCRG00000039629) wif1 (ENSCCRG00000026786) Golden-line barbel MODERN SPECIES ENSSGRG00000000058 net1 (ENSSGRG00000000059) mkln1 (ENSSGRG00000000061) ENSSGRG00000000062 cyb5r3 (ENSSGRG00000000063) btbd11a (ENSSGRG00000000064) cry1a (ENSSGRG00000000066) tnnt2c (ENSSGRG00000000067) si:dkey-222f8.3 (ENSSGRG00000000068) braf (ENSSGRG00000000069) mrps33 (ENSSGRG00000000070) mrps33 (ENSSGRG00000000071) tmem178bb (ENSSGRG00000000073) cnot4b (ENSSGRG00000000074) ENSSGRG00000000083 mkrn1 (ENSSGRG00000000108) ##22 TMEM121B (ENSSGRG00000000178) ENSSGRG00000000184 rergla (ENSSGRG00000000198) arhgef39 (ENSSGRG00000000213) lmo3 (ENSSGRG00000000230) mgst1.1 (ENSSGRG00000000245) mgst1.2 (ENSSGRG00000000248) HELB (ENSSGRG00000000306) IRAK3 (ENSSGRG00000000516) b2m (ENSSGRG00000000526) hmga2 (ENSSGRG00000000534) msrb3 (ENSSGRG00000000538) lemd3 (ENSSGRG00000000541) wif1 (ENSSGRG00000000584) vhll (ENSSGRG00000000593) Zebrafish MODERN SPECIES 19 gdi2 (ENSDARG00000005451) asb13a.1 (ENSDARG00000079698) asb13a.2 (ENSDARG00000045765) net1 (ENSDARG00000032765) mkln1 (ENSDARG00000025576) podxl (ENSDARG00000031228) cyb5r3 (ENSDARG00000005891) btbd11a (ENSDARG00000063255) cry1a (ENSDARG00000045768) tnnt2c (ENSDARG00000032242) si:dkey-222f8.3 (ENSDARG00000058366) braf (ENSDARG00000017661) mrps33 (ENSDARG00000020015) tmem178bb (ENSDARG00000006747) cnot4b (ENSDARG00000007639) mkrn1 (ENSDARG00000041665) ##22 TMEM121B (ENSDARG00000087319) il17ra1a (ENSDARG00000058244) ENSDARG00000103365 ENSDARG00000095461 ENSDARG00000074873 ENSDARG00000104625 ENSDARG00000103215 rergla (ENSDARG00000019396) arhgef39 (ENSDARG00000013476) lmo3 (ENSDARG00000008720) ENSDARG00000110404 mgst1.1 (ENSDARG00000032618) mgst1.2 (ENSDARG00000022165) dera (ENSDARG00000005897) HELB (ENSDARG00000053127) Euteleosteomorpha ANCESTRAL SPECIES 100 ENSGT00940000161105 ENSGT00940000160758 ENSGT00940000164299.b.a ENSGT00940000158576.a.a ENSGT00940000161860 ENSGT00390000017181 ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000165644 ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000011980.a.i.b ENSGT00390000011980.a.i.a ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 ENSGT01050000244940.b Acanthomorphata ANCESTRAL SPECIES 76 ENSGT00950000183039.A ENSGT00940000156088.c.a ENSGT00940000157212.B ENSGT00940000158153.b ENSGT00940000161105 ENSGT00940000160758 ENSGT00940000164299.b.a ENSGT00940000158576.a.a ENSGT00940000161860 ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000165644 ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 ENSGT01050000244940.b ENSGT00940000165013.b.b ENSGT00940000161222 Euacanthomorphacea ANCESTRAL SPECIES 45 ENSGT00940000156088.c.a ENSGT00940000157212.B ENSGT00940000166983 ENSGT00940000156786 ENSGT00940000161105 ENSGT00940000160758 ENSGT00940000164299.b.a ENSGT00940000158576.a.a ENSGT00940000161860 ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000165644 ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b Pinecone sodierfish MODERN SPECIES 15 rtcb (ENSMMDG00005012697) fbxo7 (ENSMMDG00005012695) kiaa0930 (ENSMMDG00005012692) nup50 (ENSMMDG00005012690) PHF21B (ENSMMDG00005012689) ARHGAP8 (ENSMMDG00005012685) ENSMMDG00005012683 KCNA1 (ENSMMDG00005012681) KCNA5 (ENSMMDG00005012679) ENSMMDG00005012678 large1 (ENSMMDG00005012660) braf (ENSMMDG00005012144) mrps33 (ENSMMDG00005012102) tmem178bb (ENSMMDG00005012099) cnot4b (ENSMMDG00005012021) mkrn1 (ENSMMDG00005011999) ##22 TMEM121B (ENSMMDG00005011997) ENSMMDG00005011994 rergla (ENSMMDG00005011992) arhgef39 (ENSMMDG00005011988) lmo3 (ENSMMDG00005011966) MGST1 (ENSMMDG00005011964) MGST1 (ENSMMDG00005011959) dera (ENSMMDG00005011720) hmga2 (ENSMMDG00005011714) msrb3 (ENSMMDG00005011709) lemd3 (ENSMMDG00005011705) wif1 (ENSMMDG00005011703) tmbim4 (ENSMMDG00005011698) ENSMMDG00005011696 b2ml (ENSMMDG00005011694) Percomorphaceae ANCESTRAL SPECIES 81 ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000165644 ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000161222 Tiger tail seahorse MODERN SPECIES 128 ENSHCOG00000009587 ppp6r2a (ENSHCOG00000009569) ENSHCOG00000009536 lemd3 (ENSHCOG00000009526) tmbim4 (ENSHCOG00000009487) tmbim4 (ENSHCOG00000009423) msrb3 (ENSHCOG00000009395) ENSHCOG00000009367 dera (ENSHCOG00000009347) mgst1.1 (ENSHCOG00000009311) lmo3 (ENSHCOG00000009305) arhgef39 (ENSHCOG00000009290) rergla (ENSHCOG00000009274) ENSHCOG00000009216 ENSHCOG00000009173 mkrn1 (ENSHCOG00000009164) ##22 ENSHCOG00000009132 tmem178bb (ENSHCOG00000009122) mrps33 (ENSHCOG00000009109) braf (ENSHCOG00000009104) large1 (ENSHCOG00000009043) ENSHCOG00000008995 slc26a3.1 (ENSHCOG00000008984) b2m (ENSHCOG00000008946) ENSHCOG00000008939 ENSHCOG00000008892 kcnc2 (ENSHCOG00000008884) ENSHCOG00000008793 ENSHCOG00000008769 RAB19 (ENSHCOG00000008751) lrrc17 (ENSHCOG00000008723) Percomorphaceae_B ANCESTRAL SPECIES 21 ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000165644 ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000161222 ENSGT00390000006913 Ovalentaria ANCESTRAL SPECIES 22 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000156380 ENSGT00950000182818.B.a ENSGT00390000017006 Atherinomorphae ANCESTRAL SPECIES 59 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00390000017006 ENSGT00950000182818.B.a ENSGT00940000156380 Cyprinodontiformes ANCESTRAL SPECIES 68 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00390000017006 ENSGT00950000182818.B.a ENSGT00940000156380 ENSGT00940000165013.a Aplocheiloidei ANCESTRAL SPECIES 173 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00390000017006 Mangrove rivulus MODERN SPECIES 91 nopchap1 (ENSKMAG00000010511) SLC41A2 (ENSKMAG00000010525) chst11 (ENSKMAG00000010556) nfybb (ENSKMAG00000010577) SNX4 (ENSKMAG00000010601) ENSKMAG00000010660 large1 (ENSKMAG00000010740) braf (ENSKMAG00000010816) mrps33 (ENSKMAG00000010873) tmem178bb (ENSKMAG00000010893) ENSKMAG00000010941 mkrn1 (ENSKMAG00000010952) ##22 TMEM121B (ENSKMAG00000010971) arhgef39 (ENSKMAG00000010985) lmo3 (ENSKMAG00000011019) dera (ENSKMAG00000011043) msrb3 (ENSKMAG00000011071) lemd3 (ENSKMAG00000011096) rint1 (ENSKMAG00000011115) ENSKMAG00000011132 ENSKMAG00000011147 gdi2 (ENSKMAG00000011167) ankrd16 (ENSKMAG00000011210) recql (ENSKMAG00000011232) golt1ba (ENSKMAG00000011265) spx (ENSKMAG00000011295) gys2 (ENSKMAG00000011326) Turquoise killifish MODERN SPECIES 1610 ENSNFUG00015011578 TMTC1 (ENSNFUG00015011507) gys2 (ENSNFUG00015010803) ENSNFUG00015010759 GOLT1BA (ENSNFUG00015010745) RECQL (ENSNFUG00015009217) ENSNFUG00015003610 LARGE (ENSNFUG00015003603) braf (ENSNFUG00015003031) MRPS33 (ENSNFUG00015002842) ENSNFUG00015002837 ENSNFUG00015002832 ENSNFUG00015002827 TMEM178B (ENSNFUG00015002821) ENSNFUG00015002817 MKRN1 (ENSNFUG00015002803) ##22 TMEM121B (ENSNFUG00015002795) ENSNFUG00015002792 arhgef39 (ENSNFUG00015002788) dera (ENSNFUG00015002750) msrb3 (ENSNFUG00015002732) LEMD3 (ENSNFUG00015002719) ENSNFUG00015002711 RINT1 (ENSNFUG00015002621) ENSNFUG00015002606 ENSNFUG00015002592 HSPA14 (ENSNFUG00015002574) prl2 (ENSNFUG00015002547) COX18 (ENSNFUG00015002519) selenot2 (ENSNFUG00015002511) ENSNFUG00015002503 Cyprinodontoidei ANCESTRAL SPECIES 42 ENSGT00940000165059.B.b ENSGT00940000160326.c.b ENSGT00950000182994.B.a.b ENSGT00940000153969.a ENSGT00940000158078 ENSGT00940000154380.a.a.b ENSGT00940000155263 ENSGT00390000009899.b.m ENSGT00940000157013 ENSGT00390000014507.a.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00390000017006 ENSGT00950000182818.B.a ENSGT00940000156380 ENSGT00940000165013.a ENSGT00390000007681.b.a.b ENSGT00940000158662 ENSGT00940000155662.e.a ENSGT00930000151029.i.b Poeciliinae ANCESTRAL SPECIES 19 ENSGT00940000158018 ENSGT00940000165155 ENSGT00950000183042.a.b.a ENSGT00940000159167 ENSGT00940000154917 ENSGT00730000111314 ENSGT00390000001702 ENSGT00940000155849.h ENSGT00940000165059.B.b ENSGT00940000160326.c.b ENSGT00950000182994.B.a.b ENSGT00940000153969.a ENSGT00940000158078 ENSGT00940000154380.a.a.b ENSGT00940000155263 ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00390000017006 ENSGT00950000182818.B.a ENSGT00940000156380 ENSGT00940000165013.a ENSGT00390000007681.b.a.b ENSGT00940000158662 ENSGT00940000155662.e.a ENSGT00930000151029.i.b Poecilia ANCESTRAL SPECIES 47 ENSGT00940000158018 ENSGT00940000165155 ENSGT00950000183042.a.b.a ENSGT00940000159167 ENSGT00940000154917.`b ENSGT00730000111314 ENSGT00390000001702 ENSGT00940000155849.h ENSGT00940000165059.B.b ENSGT00940000160326.c.b ENSGT00950000182994.B.a.b ENSGT00940000153969.a ENSGT00940000158078 ENSGT00940000154380.a.a.b ENSGT00940000155263 ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00390000017006 ENSGT00950000182818.B.a ENSGT00940000156380 ENSGT00940000165013.a ENSGT00390000007681.b.a.b ENSGT00940000158662 ENSGT00940000155662.e.a ENSGT00930000151029.i.b NAME_6 ANCESTRAL SPECIES 162 ENSGT00390000011355.b ENSGT00940000158018 ENSGT00940000165155 ENSGT00950000183042.a.b.a ENSGT00940000159167 ENSGT00940000154917.`b ENSGT00730000111314 ENSGT00390000001702 ENSGT00940000155849.h ENSGT00940000165059.B.b ENSGT00950000182994.B.a.b ENSGT00940000153969.a ENSGT00940000158078 ENSGT00940000154380.a.a.b ENSGT00940000155263 ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00390000017006 ENSGT00950000182818.B.a ENSGT00940000156380 ENSGT00940000165013.a ENSGT00390000007681.b.a.b Sailfin molly MODERN SPECIES 805 gdi2 (ENSPLAG00000014048) ankrd16 (ENSPLAG00000014035) glt8d2 (ENSPLAG00000000322) ENSPLAG00000014000 adm2a (ENSPLAG00000013994) sbf1 (ENSPLAG00000013988) mkrn1 (ENSPLAG00000013918) ##22 TMEM121B (ENSPLAG00000013916) ENSPLAG00000013907 arhgef39 (ENSPLAG00000013891) lmo3 (ENSPLAG00000013883) Amazon molly MODERN SPECIES 542 samm50l (ENSPFOG00000004188) ALDH1L2 (ENSPFOG00000004387) nopchap1 (ENSPFOG00000004728) SLC41A2 (ENSPFOG00000004763) chst11 (ENSPFOG00000005076) nfybb (ENSPFOG00000005143) podxl (ENSPFOG00000005256) mkln1 (ENSPFOG00000005263) net1 (ENSPFOG00000005276) ENSPFOG00000005399 gdi2 (ENSPFOG00000005474) ankrd16 (ENSPFOG00000005621) glt8d2 (ENSPFOG00000005626) adm2a (ENSPFOG00000005698) sbf1 (ENSPFOG00000005727) mkrn1 (ENSPFOG00000006693) ##22 ENSPFOG00000006749 Guppy MODERN SPECIES 454 nopchap1 (ENSPREG00000016857) SLC41A2 (ENSPREG00000016873) chst11 (ENSPREG00000016896) nfybb (ENSPREG00000016909) podxl (ENSPREG00000016939) mkln1 (ENSPREG00000016965) net1 (ENSPREG00000017022) ENSPREG00000017094 asb13a.1 (ENSPREG00000017111) gdi2 (ENSPREG00000017153) ankrd16 (ENSPREG00000017179) glt8d2 (ENSPREG00000017195) ENSPREG00000017207 adm2a (ENSPREG00000017223) sbf1 (ENSPREG00000017279) mkrn1 (ENSPREG00000017555) ##22 ENSPREG00000017583 arhgef39 (ENSPREG00000017609) lmo3 (ENSPREG00000017627) dera (ENSPREG00000017642) msrb3 (ENSPREG00000017664) lemd3 (ENSPREG00000017681) rint1 (ENSPREG00000017706) prl2 (ENSPREG00000017738) hspa14 (ENSPREG00000017775) ENSPREG00000017816 MPPED1 (ENSPREG00000017827) ENSPREG00000017842 sult4a1 (ENSPREG00000017855) pnpla3 (ENSPREG00000017874) SNX4 (ENSPREG00000017895) Platyfish MODERN SPECIES 8 ALDH1L2 (ENSXMAG00000005276) nopchap1 (ENSXMAG00000020873) SLC41A2 (ENSXMAG00000005250) chst11 (ENSXMAG00000023984) nfybb (ENSXMAG00000005234) podxl (ENSXMAG00000026090) mkln1 (ENSXMAG00000005201) net1 (ENSXMAG00000005187) ENSXMAG00000005184 asb13a.1 (ENSXMAG00000005180) gdi2 (ENSXMAG00000005150) ankrd16 (ENSXMAG00000005145) glt8d2 (ENSXMAG00000005132) adm2a (ENSXMAG00000005131) sbf1 (ENSXMAG00000005098) mkrn1 (ENSXMAG00000005086) ##22 TMEM121B (ENSXMAG00000020020) ENSXMAG00000005083 arhgef39 (ENSXMAG00000005072) lmo3 (ENSXMAG00000005065) dera (ENSXMAG00000005055) msrb3 (ENSXMAG00000023170) lemd3 (ENSXMAG00000005030) rint1 (ENSXMAG00000005014) prl2 (ENSXMAG00000009253) hspa14 (ENSXMAG00000005002) ENSXMAG00000005001 MPPED1 (ENSXMAG00000022388) ENSXMAG00000024617 sult4a1 (ENSXMAG00000021509) pnpla3 (ENSXMAG00000003131) NAME_4 ANCESTRAL SPECIES 199 ENSGT00390000015299.a.b.b.a ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00390000017006 ENSGT00950000182818.B.a ENSGT00940000156380 ENSGT00940000165013.a ENSGT00390000007681.b.a.b ENSGT00940000158662 ENSGT00940000155662.e.a ENSGT00930000151029.i.b Mummichog MODERN SPECIES 315 tmem178bb (ENSFHEG00000011169) mkrn1 (ENSFHEG00000011140) ##22 TMEM121B (ENSFHEG00000011118) ENSFHEG00000011112 ENSFHEG00000011044 ENSFHEG00000011031 ENSFHEG00000010844 ENSFHEG00000010826 ENSFHEG00000010707 arhgef39 (ENSFHEG00000010631) dera (ENSFHEG00000010624) msrb3 (ENSFHEG00000010581) lemd3 (ENSFHEG00000010570) rint1 (ENSFHEG00000010559) prl2 (ENSFHEG00000010548) hspa14 (ENSFHEG00000010526) ENSFHEG00000010449 Sheepshead minnow MODERN SPECIES 594 LONP1 (ENSCVAG00000007639) LRRC24 (ENSCVAG00000007316) tmem178bb (ENSCVAG00000007312) mkrn1 (ENSCVAG00000007296) ##22 TMEM121B (ENSCVAG00000007289) ddost (ENSCVAG00000007282) skia (ENSCVAG00000007240) prkcz (ENSCVAG00000007182) ENSCVAG00000007060 ENSCVAG00000006989 Oryzias ANCESTRAL SPECIES 41 ENSGT00940000158662 ENSGT00940000155662.e.a ENSGT00940000158027 ENSGT00390000004586 ENSGT01050000244841.A.b.b.a.a ENSGT00390000008099 ENSGT00930000151029.i.b ENSGT00390000006760 ENSGT00940000157013 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00390000017006 ENSGT00940000165013.b.b ENSGT00950000182818.B.a ENSGT00940000156380 ENSGT00940000165013.a ENSGT00940000153438.b ENSGT00940000158848 ENSGT01100000263489.a.a.b.a.a.b.a.a.a.a.b.a.f.a Oryzias_b ANCESTRAL SPECIES 91 ENSGT00670000099475 ENSGT00390000008099 ENSGT00940000158662 ENSGT00940000155662.e.a ENSGT00940000158027 ENSGT00390000004586 ENSGT01050000244841.A.b.b.a.a ENSGT00930000151029.i.b ENSGT00390000006760 ENSGT00940000157013 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A Indian medaka MODERN SPECIES 2 TMTC1 (ENSOMEG00000019721) COG5 (ENSOMEG00000019652) gpr22a (ENSOMEG00000019566) SNX4 (ENSOMEG00000019546) ttll12 (ENSOMEG00000019525) recql (ENSOMEG00000019484) golt1ba (ENSOMEG00000019438) SPX (ENSOMEG00000019412) tmem178bb (ENSOMEG00000019382) ENSOMEG00000019370 mkrn1 (ENSOMEG00000019338) ##22 TMEM121B (ENSOMEG00000019322) ENSOMEG00000019288 arhgef39 (ENSOMEG00000019219) lmo3 (ENSOMEG00000019198) dera (ENSOMEG00000019181) ENSOMEG00000019149 ENSOMEG00000019133 ENSOMEG00000019113 ENSOMEG00000019093 ENSOMEG00000019049 ENSOMEG00000018939 ENSOMEG00000018918 ENSOMEG00000018892 apex1 (ENSOMEG00000018876) osgep (ENSOMEG00000018855) Javanese ricefish MODERN SPECIES 15 ENSOJAG00000015277 ndufa5 (ENSOJAG00000015289) sult4a1 (ENSOJAG00000015309) pnpla3 (ENSOJAG00000015344) TMTC1 (ENSOJAG00000015393) COG5 (ENSOJAG00000015553) gpr22a (ENSOJAG00000016163) SNX4 (ENSOJAG00000016176) ttll12 (ENSOJAG00000016263) recql (ENSOJAG00000016459) golt1ba (ENSOJAG00000017238) spx (ENSOJAG00000017253) gys2 (ENSOJAG00000017296) tmem178bb (ENSOJAG00000017387) ENSOJAG00000017404 mkrn1 (ENSOJAG00000017428) ##22 TMEM121B (ENSOJAG00000017482) ENSOJAG00000017495 arhgef39 (ENSOJAG00000017604) lmo3 (ENSOJAG00000017627) dera (ENSOJAG00000017685) ENSOJAG00000017790 ENSOJAG00000017807 msrb3 (ENSOJAG00000017818) ssuh2rs1 (ENSOJAG00000017839) ssuh2rs1 (ENSOJAG00000017866) ENSOJAG00000017931 ENSOJAG00000017939 braf (ENSOJAG00000017950) mrps33 (ENSOJAG00000018112) NXPE3 (ENSOJAG00000018142) Oryzias_a ANCESTRAL SPECIES 15 ENSGT00390000008756 ENSGT00390000008099 ENSGT01050000244841.A.b.b.a.a ENSGT00390000004586 ENSGT00940000158027 ENSGT00940000155662.e.a ENSGT00940000158662 ENSGT00930000151029.i.b ENSGT00390000006760 ENSGT00940000157013 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00390000017006 ENSGT00940000166554.b ENSGT00940000165013.b.b ENSGT00950000182818.B.a ENSGT00940000156380 ENSGT00940000165013.a ENSGT00940000153438.b ENSGT00940000158848 Japanese Medaka HdrR MODERN SPECIES 15 bloc1s3 (ENSORLG00000027358) ndufa5 (ENSORLG00000013008) ENSORLG00000012989 COG5 (ENSORLG00000012980) TMTC1 (ENSORLG00000012959) pnpla3 (ENSORLG00000012922) sult4a1 (ENSORLG00000012911) ENSORLG00000012881 ttll12 (ENSORLG00000022534) recql (ENSORLG00000012853) golt1ba (ENSORLG00000012842) SPX (ENSORLG00000028862) gys2 (ENSORLG00000012819) tmem178bb (ENSORLG00000023225) ENSORLG00000012771 mkrn1 (ENSORLG00000012765) ##22 TMEM121B (ENSORLG00000012744) ENSORLG00000023637 arhgef39 (ENSORLG00000029527) lmo3 (ENSORLG00000021821) dera (ENSORLG00000012721) ENSORLG00000025615 msrb3 (ENSORLG00000012693) lemd3 (ENSORLG00000012681) rint1 (ENSORLG00000012650) ENSORLG00000023202 ENSORLG00000030625 prl2 (ENSORLG00000012617) hspa14 (ENSORLG00000012603) orla-b2m (ENSORLG00000012576) ipo8 (ENSORLG00000012548) Chinese medaka MODERN SPECIES 465 mkrn1 (ENSOSIG00000006363) ##22 ENSOSIG00000006376 arhgef39 (ENSOSIG00000006443) lmo3 (ENSOSIG00000006444) dera (ENSOSIG00000006445) MSRB3 (ENSOSIG00000007214) lemd3 (ENSOSIG00000007216) rint1 (ENSOSIG00000007261) ENSOSIG00000007262 b2m (ENSOSIG00000007263) prl2 (ENSOSIG00000007280) hspa14 (ENSOSIG00000007265) ENSOSIG00000007283 caprin2 (ENSOSIG00000007285) ipo8 (ENSOSIG00000007291) Ovalentaria_B ANCESTRAL SPECIES 29 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000156380 ENSGT00950000182818.B.a ENSGT00390000017006 Pomacentridae ANCESTRAL SPECIES 66 ENSGT00940000157013 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT01070000253775.a.d.a.a.a.b.g.b ENSGT01070000253775.a.d.a.a.a.b.g.a ENSGT00510000047522 ENSGT00390000009899.b.m ENSGT00940000155263 Pomacentridae_A ANCESTRAL SPECIES 74 ENSGT00940000157013 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT01070000253775.a.d.a.a.a.b.g.b ENSGT00510000047522 ENSGT00390000009899.b.m ENSGT00940000155263 ENSGT00940000154380.a.a.b Amphiprion ANCESTRAL SPECIES 122 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00940000159224.b.f ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT01070000253775.a.d.a.a.a.b.g.b ENSGT00510000047522 ENSGT00390000009899.b.m ENSGT00940000155263 Orange clownfish MODERN SPECIES 13 golt1ba (ENSAPEG00000002006) spx (ENSAPEG00000001994) gys2 (ENSAPEG00000001909) ENSAPEG00000001875 LDHB (ENSAPEG00000001846) slc25a3b (ENSAPEG00000001770) tmpoa (ENSAPEG00000001750) strap (ENSAPEG00000001709) ENSAPEG00000001654 large1 (ENSAPEG00000001593) braf (ENSAPEG00000001484) mrps33 (ENSAPEG00000001462) RAMP1 (ENSAPEG00000001433) tmem178bb (ENSAPEG00000001419) ENSAPEG00000001402 mkrn1 (ENSAPEG00000001360) ##22 TMEM121B (ENSAPEG00000001347) ENSAPEG00000001335 arhgef39 (ENSAPEG00000001205) lmo3 (ENSAPEG00000001168) mgst1.1 (ENSAPEG00000001151) dera (ENSAPEG00000001104) msrb3 (ENSAPEG00000001085) lemd3 (ENSAPEG00000001061) tmbim4 (ENSAPEG00000001033) ENSAPEG00000001011 slc26a3.1 (ENSAPEG00000000908) cbll1 (ENSAPEG00000000841) ppp6r2a (ENSAPEG00000000693) sbf1 (ENSAPEG00000000364) adm2a (ENSAPEG00000000341) Clown anemonefish MODERN SPECIES 2392 tmem178bb (ENSAOCG00000000602) ENSAOCG00000009731 mkrn1 (ENSAOCG00000009718) ##22 TMEM121B (ENSAOCG00000009702) ENSAOCG00000009692 Spiny chromis MODERN SPECIES 2257 ENSAPOG00000024358 mkrn1 (ENSAPOG00000024355) ##22 TMEM121B (ENSAPOG00000024348) Bicolor damselfish MODERN SPECIES 251 LDHB (ENSSPAG00000008647) slc25a3b (ENSSPAG00000008655) ENSSPAG00000008692 ENSSPAG00000008701 tmpoa (ENSSPAG00000008714) strap (ENSSPAG00000008759) ENSSPAG00000008781 ENSSPAG00000008790 large1 (ENSSPAG00000008858) ENSSPAG00000008890 ENSSPAG00000008901 braf (ENSSPAG00000008939) mrps33 (ENSSPAG00000008993) tmem178bb (ENSSPAG00000009053) ENSSPAG00000009057 mkrn1 (ENSSPAG00000009068) ##22 TMEM121B (ENSSPAG00000009089) ENSSPAG00000009094 glt8d2 (ENSSPAG00000009119) ENSSPAG00000009134 ADM2 (ENSSPAG00000009142) sbf1 (ENSSPAG00000009161) ppp6r2a (ENSSPAG00000009264) ENSSPAG00000009457 cbll1 (ENSSPAG00000009464) SLC26A3 (ENSSPAG00000009522) ENSSPAG00000010081 ENSSPAG00000010231 rnmt (ENSSPAG00000010250) ENSSPAG00000010313 ENSSPAG00000010337 Cichlidae ANCESTRAL SPECIES 65 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000156380 ENSGT00950000182818.B.a ENSGT00390000017006 ENSGT00940000155728.p ENSGT00510000048519.a Pseudocrenilabrinae ANCESTRAL SPECIES 21 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a.h ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000156380 ENSGT00950000182818.B.a ENSGT00390000017006 ENSGT00940000155728.p ENSGT00510000048519.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 10 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a.h ENSGT00940000156154 ENSGT00390000011401 ENSGT00940000177593 ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000156380 ENSGT00950000182818.B.a ENSGT00390000017006 ENSGT00940000155728.p ENSGT00510000048519.a Haplochromini ANCESTRAL SPECIES 9 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902 ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a.h ENSGT00940000156154 ENSGT00390000011401 ENSGT00940000177593 ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000156380 ENSGT00950000182818.B.a ENSGT00390000017006 ENSGT00940000155728.p ENSGT00510000048519.a Haplochromini_A ANCESTRAL SPECIES 9 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902.c ENSGT00940000159902.d ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a.h ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000156380 ENSGT00950000182818.B.a ENSGT00390000017006 ENSGT00940000155728.p ENSGT00510000048519.a P. nyererei MODERN SPECIES 345 lhx9 (ENSPNYG00000014256) si:dkey-121a9.3 (ENSPNYG00000014270) DENND1B (ENSPNYG00000014308) crb1 (ENSPNYG00000014381) axdnd1 (ENSPNYG00000014459) nphs2 (ENSPNYG00000014510) ENSPNYG00000014549 ENSPNYG00000014584 fam163ab (ENSPNYG00000014608) RABGAP1L (ENSPNYG00000014645) ENSPNYG00000014740 braf (ENSPNYG00000014772) mrps33 (ENSPNYG00000014807) tmem178bb (ENSPNYG00000014822) ENSPNYG00000014858 mkrn1 (ENSPNYG00000014904) ##22 TMEM121B (ENSPNYG00000014978) ENSPNYG00000014988 arhgef39 (ENSPNYG00000015016) lmo3 (ENSPNYG00000015050) dera (ENSPNYG00000015066) msrb3 (ENSPNYG00000015088) lemd3 (ENSPNYG00000015115) tmbim4 (ENSPNYG00000015154) ENSPNYG00000015167 b2m (ENSPNYG00000015177) hspa14 (ENSPNYG00000015187) prl2 (ENSPNYG00000015212) rint1 (ENSPNYG00000015229) plekha5 (ENSPNYG00000015273) aebp2 (ENSPNYG00000015340) Haplochromini_B ANCESTRAL SPECIES 11 ENSGT00940000158821 ENSGT00390000016548 ENSGT00940000155446 ENSGT00940000155152.f.b ENSGT00390000005554 ENSGT01030000234614.B.b ENSGT00940000159902.c ENSGT00940000159228.a.a ENSGT00940000163422 ENSGT00940000154611.ad.b ENSGT00940000163581.f.a.h ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000156380 ENSGT00950000182818.B.a ENSGT00390000017006 ENSGT00940000155728.p ENSGT00510000048519.a Zebra mbuna MODERN SPECIES 1099 csnk1g2b (ENSMZEG00005018885) zgc:101100 (ENSMZEG00005018901) rexo1 (ENSMZEG00005018904) mknk2b (ENSMZEG00005018927) mob3a (ENSMZEG00005018933) zap70 (ENSMZEG00005018944) adamts10 (ENSMZEG00005018969) myo1f (ENSMZEG00005018998) acer1 (ENSMZEG00005019030) mllt1b (ENSMZEG00005019042) acsbg2 (ENSMZEG00005019050) rfx2 (ENSMZEG00005019062) FCHO1 (ENSMZEG00005019101) tmem178bb (ENSMZEG00005019117) ENSMZEG00005019123 mkrn1 (ENSMZEG00005019125) ##22 TMEM121B (ENSMZEG00005019131) ENSMZEG00005019133 arhgef39 (ENSMZEG00005019139) lmo3 (ENSMZEG00005019145) dera (ENSMZEG00005019151) msrb3 (ENSMZEG00005019159) lemd3 (ENSMZEG00005019170) tmbim4 (ENSMZEG00005019174) ENSMZEG00005019180 b2m (ENSMZEG00005019181) hspa14 (ENSMZEG00005019189) prl2 (ENSMZEG00005019201) rint1 (ENSMZEG00005019204) plekha5 (ENSMZEG00005019230) ENSMZEG00005019258 Eastern happy MODERN SPECIES 8 lhx9 (ENSACLG00000012736) si:dkey-121a9.3 (ENSACLG00000012757) DENND1B (ENSACLG00000012767) crb1 (ENSACLG00000013390) axdnd1 (ENSACLG00000013399) nphs2 (ENSACLG00000013415) ENSACLG00000013433 fam163ab (ENSACLG00000013460) RABGAP1L (ENSACLG00000013469) GPR52 (ENSACLG00000013498) ENSACLG00000013499 braf (ENSACLG00000013512) mrps33 (ENSACLG00000013611) tmem178bb (ENSACLG00000013773) ENSACLG00000013782 mkrn1 (ENSACLG00000013799) ##22 TMEM121B (ENSACLG00000013920) ENSACLG00000013926 arhgef39 (ENSACLG00000013963) lmo3 (ENSACLG00000014044) ENSACLG00000014081 dera (ENSACLG00000014090) msrb3 (ENSACLG00000014151) lemd3 (ENSACLG00000014213) tmbim4 (ENSACLG00000014292) ENSACLG00000014385 ENSACLG00000014404 b2m (ENSACLG00000014415) hspa14 (ENSACLG00000014433) prl2 (ENSACLG00000014475) rint1 (ENSACLG00000014494) Burton s mouthbrooder MODERN SPECIES 431 DENND1B (ENSHBUG00000018366) crb1 (ENSHBUG00000018350) axdnd1 (ENSHBUG00000018332) nphs2 (ENSHBUG00000018320) ENSHBUG00000018309 ENSHBUG00000018292 fam163ab (ENSHBUG00000018207) RABGAP1L (ENSHBUG00000018175) GPR52 (ENSHBUG00000018118) ENSHBUG00000018097 braf (ENSHBUG00000018081) mrps33 (ENSHBUG00000017991) tmem178bb (ENSHBUG00000017979) ENSHBUG00000017960 ENSHBUG00000017948 mkrn1 (ENSHBUG00000017935) ##22 TMEM121B (ENSHBUG00000017913) ENSHBUG00000017893 arhgef39 (ENSHBUG00000017855) lmo3 (ENSHBUG00000017798) dera (ENSHBUG00000017778) msrb3 (ENSHBUG00000017721) lemd3 (ENSHBUG00000017690) tmbim4 (ENSHBUG00000017670) ENSHBUG00000017660 b2m (ENSHBUG00000017657) hspa14 (ENSHBUG00000017629) prl2 (ENSHBUG00000000523) rint1 (ENSHBUG00000017558) plekha5 (ENSHBUG00000017497) aebp2 (ENSHBUG00000017392) Nile tilapia MODERN SPECIES 8 crb1 (ENSONIG00000014136) axdnd1 (ENSONIG00000014140) nphs2 (ENSONIG00000014142) ENSONIG00000014143 fam163ab (ENSONIG00000014145) GPR52 (ENSONIG00000020425) RABGAP1L (ENSONIG00000029376) ENSONIG00000014147 braf (ENSONIG00000032587) mrps33 (ENSONIG00000034428) ENSONIG00000020426 ENSONIG00000040069 tmem178bb (ENSONIG00000014148) ENSONIG00000038220 ENSONIG00000014149 mkrn1 (ENSONIG00000014150) ##22 TMEM121B (ENSONIG00000014153) ENSONIG00000040083 ENSONIG00000014154 arhgef39 (ENSONIG00000014156) ENSONIG00000038621 lmo3 (ENSONIG00000014160) dera (ENSONIG00000014161) msrb3 (ENSONIG00000014162) lemd3 (ENSONIG00000014166) tmbim4 (ENSONIG00000042587) ENSONIG00000039245 ENSONIG00000030436 b2m (ENSONIG00000034581) ENSONIG00000037925 hspa14 (ENSONIG00000014177) Midas cichlid MODERN SPECIES 575 spx (ENSACIG00000020887) gys2 (ENSACIG00000020899) ENSACIG00000020926 ENSACIG00000020932 ENSACIG00000020945 slc25a3b (ENSACIG00000020954) tmpoa (ENSACIG00000020972) strap (ENSACIG00000020986) ENSACIG00000020999 large1 (ENSACIG00000021050) ENSACIG00000021074 braf (ENSACIG00000021084) mrps33 (ENSACIG00000021109) tmem178bb (ENSACIG00000021120) ENSACIG00000021130 mkrn1 (ENSACIG00000021136) ##22 TMEM121B (ENSACIG00000021203) ENSACIG00000021210 arhgef39 (ENSACIG00000021267) aurka (ENSACIG00000021291) Percomorphaceae_C ANCESTRAL SPECIES 22 ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000165644 ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000161222 Eupercaria ANCESTRAL SPECIES 21 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000165644 ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000161222 Tetraodontidae ANCESTRAL SPECIES 51 ENSGT00940000155728.p ENSGT00940000157013 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000165644 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 ENSGT00390000017006 ENSGT00950000182818.B.a ENSGT00940000156380.z ENSGT00940000165013.a ENSGT00940000157643 ENSGT00940000155240.A Fugu MODERN SPECIES 9 plekha5 (ENSTRUG00000022044) recql (ENSTRUG00000000534) golt1ba (ENSTRUG00000000487) spx (ENSTRUG00000000477) gys2 (ENSTRUG00000010601) ENSTRUG00000021684 LDHB (ENSTRUG00000010689) slc25a3b (ENSTRUG00000010834) tmpoa (ENSTRUG00000025925) strap (ENSTRUG00000011050) ENSTRUG00000011186 large1 (ENSTRUG00000011340) braf (ENSTRUG00000011625) mrps33 (ENSTRUG00000033330) tmem178bb (ENSTRUG00000012015) mkrn1 (ENSTRUG00000012057) ##22 TMEM121B (ENSTRUG00000028547) il17ra1a (ENSTRUG00000012220) ENSTRUG00000031086 arhgef39 (ENSTRUG00000012270) lmo3 (ENSTRUG00000012336) dera (ENSTRUG00000012381) rint1 (ENSTRUG00000012472) prl2 (ENSTRUG00000012551) hspa14 (ENSTRUG00000012564) ENSTRUG00000024087 lemd3 (ENSTRUG00000012748) msrb3 (ENSTRUG00000012907) caprin2 (ENSTRUG00000012923) ipo8 (ENSTRUG00000012975) Tetraodon MODERN SPECIES 26 ENSTNIG00000007245 ndufa5 (ENSTNIG00000001461) aebp2 (ENSTNIG00000007244) plekha5 (ENSTNIG00000007243) recql (ENSTNIG00000007242) golt1ba (ENSTNIG00000007241) gys2 (ENSTNIG00000007240) LDHB (ENSTNIG00000007239) slc25a3b (ENSTNIG00000007238) tmpoa (ENSTNIG00000007237) strap (ENSTNIG00000007236) ENSTNIG00000007235 large1 (ENSTNIG00000007234) braf (ENSTNIG00000007233) tmem178bb (ENSTNIG00000007232) mkrn1 (ENSTNIG00000007231) ##22 TMEM121B (ENSTNIG00000007230) arhgef39 (ENSTNIG00000001519) lmo3 (ENSTNIG00000007229) dera (ENSTNIG00000007228) ENSTNIG00000007227 msrb3 (ENSTNIG00000007226) ENSTNIG00000007225 ipo8 (ENSTNIG00000007224) ENSTNIG00000000689 ENSTNIG00000007223 DNAH10 (ENSTNIG00000007222) ENSTNIG00000001036 ENSTNIG00000001034 ENSTNIG00000000009 ENSTNIG00000000116 Eupecaria_A ANCESTRAL SPECIES 21 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000165644 ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000161222 Ballan wrasse MODERN SPECIES 222 plekha5 (ENSLBEG00000023429) recql (ENSLBEG00000023652) golt1ba (ENSLBEG00000023724) spx (ENSLBEG00000023747) gys2 (ENSLBEG00000023784) ENSLBEG00000023859 LDHB (ENSLBEG00000023875) slc25a3b (ENSLBEG00000023918) tmpoa (ENSLBEG00000024012) strap (ENSLBEG00000024059) ENSLBEG00000024134 large1 (ENSLBEG00000024243) braf (ENSLBEG00000024273) mrps33 (ENSLBEG00000024307) tmem178bb (ENSLBEG00000024315) mkrn1 (ENSLBEG00000024326) ##22 ENSLBEG00000024357 ENSLBEG00000024392 rergla (ENSLBEG00000024409) arhgef39 (ENSLBEG00000024425) Eupecaria_B ANCESTRAL SPECIES 21 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000165644 ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b Perciformes ANCESTRAL SPECIES 18 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000165644 ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000161222 Cottioidei ANCESTRAL SPECIES 106 ENSGT00390000015299.a.b.b.a ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000165644 ENSGT00940000159018.c Lumpfish MODERN SPECIES 15 ALDH1L2 (ENSCLMG00005019421) samm50l (ENSCLMG00005019420) scube1 (ENSCLMG00005019419) MPPED1 (ENSCLMG00005019336) ENSCLMG00005019334 sult4a1 (ENSCLMG00005019333) pnpla3 (ENSCLMG00005019332) SNX4 (ENSCLMG00005018951) ENSCLMG00005018945 ENSCLMG00005018944 ENSCLMG00005018943 ENSCLMG00005018941 ttll12 (ENSCLMG00005018562) dennd5b (ENSCLMG00005017427) tmem178bb (ENSCLMG00005017407) mkrn1 (ENSCLMG00005017399) ##22 TMEM121B (ENSCLMG00005017396) ENSCLMG00005017387 rint1 (ENSCLMG00005017338) prl2 (ENSCLMG00005017335) hspa14 (ENSCLMG00005017306) cdnf (ENSCLMG00005017300) ENSCLMG00005017297 ENSCLMG00005017296 ENSCLMG00005017295 tmbim4 (ENSCLMG00005017293) lemd3 (ENSCLMG00005017292) msrb3 (ENSCLMG00005017291) hmga2 (ENSCLMG00005017290) dera (ENSCLMG00005016771) mgst1.1 (ENSCLMG00005016753) Stickleback MODERN SPECIES 3 lmo3 (ENSGACG00000019264) ENSGACG00000019262 arhgef39 (ENSGACG00000019259) braf (ENSGACG00000019257) plekha5 (ENSGACG00000019253) aebp2 (ENSGACG00000019249) ndufa5 (ENSGACG00000019248) ENSGACG00000019247 COG5 (ENSGACG00000019242) TMTC1 (ENSGACG00000019240) ENSGACG00000019239 ENSGACG00000019238 ipo8 (ENSGACG00000019236) caprin2 (ENSGACG00000019233) tmem178bb (ENSGACG00000019230) mkrn1 (ENSGACG00000019227) ##22 TMEM121B (ENSGACG00000019226) ENSGACG00000019225 ENSGACG00000019223 large1 (ENSGACG00000019221) ENSGACG00000019219 nkx1.2lb (ENSGACG00000019218) uvssa (ENSGACG00000019216) ENSGACG00000019215 spdl1 (ENSGACG00000019214) trappc11 (ENSGACG00000019212) ENSGACG00000019208 zgc:162331 (ENSGACG00000019206) slc13a4 (ENSGACG00000019204) coa6 (ENSGACG00000019202) ENSGACG00000019193 Perciformes_a ANCESTRAL SPECIES 19 ENSGT00940000153438.b ENSGT00940000158848 ENSGT00940000158027 ENSGT00390000004586 ENSGT01050000244841.A.b.b.a.a ENSGT00390000008099 ENSGT00510000048519.a ENSGT00940000155728.p ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000161222 ENSGT00390000007160.a.b Channel bull blenny MODERN SPECIES 15 LDHB (ENSCGOG00000012047) slc25a3b (ENSCGOG00000011907) tmpoa (ENSCGOG00000011897) strap (ENSCGOG00000011799) ENSCGOG00000011787 large1 (ENSCGOG00000011062) caprin2 (ENSCGOG00000011029) ipo8 (ENSCGOG00000007374) TMTC1 (ENSCGOG00000007167) braf (ENSCGOG00000003426) mrps33 (ENSCGOG00000003351) tmem178bb (ENSCGOG00000003344) cnot4b (ENSCGOG00000003051) ENSCGOG00000003037 ENSCGOG00000003033 mkrn1 (ENSCGOG00000002837) ##22 TMEM121B (ENSCGOG00000002826) ENSCGOG00000002718 rergla (ENSCGOG00000024545) arhgef39 (ENSCGOG00000024542) lmo3 (ENSCGOG00000024539) mgst1.1 (ENSCGOG00000024537) dera (ENSCGOG00000024531) ENSCGOG00000024528 msrb3 (ENSCGOG00000024526) lemd3 (ENSCGOG00000024524) tmbim4 (ENSCGOG00000024523) ENSCGOG00000024522 ENSCGOG00000024520 b2m (ENSCGOG00000024518) ENSCGOG00000024514 Pike perch MODERN SPECIES 76 dhps (ENSSLUG00000014472) dhps (ENSSLUG00000014563) ENSSLUG00000014669 COG5 (ENSSLUG00000014699) gpr22a (ENSSLUG00000014775) ndufa5 (ENSSLUG00000014782) aebp2 (ENSSLUG00000014791) plekha5 (ENSSLUG00000014800) ENSSLUG00000014806 ENSSLUG00000014811 braf (ENSSLUG00000014880) mrps33 (ENSSLUG00000015876) tmem178bb (ENSSLUG00000015883) cnot4b (ENSSLUG00000015889) ENSSLUG00000015898 mkrn1 (ENSSLUG00000015908) ##22 TMEM121B (ENSSLUG00000015923) ENSSLUG00000015926 rergla (ENSSLUG00000015937) arhgef39 (ENSSLUG00000015949) lmo3 (ENSSLUG00000015991) mgst1.1 (ENSSLUG00000016026) dera (ENSSLUG00000016069) ENSSLUG00000016538 msrb3 (ENSSLUG00000016545) lemd3 (ENSSLUG00000016559) tmbim4 (ENSSLUG00000016569) ENSSLUG00000016578 b2m (ENSSLUG00000016583) ENSSLUG00000016593 cdnf (ENSSLUG00000016598) Eupecaria_C ANCESTRAL SPECIES 18 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT00390000017006 ENSGT00950000182818.B.a ENSGT00940000156380 ENSGT00390000007160.a.b ENSGT00940000161222 ENSGT00940000165013.b.b ENSGT00940000165013.a ENSGT01050000244940.b Gilthead seabream MODERN SPECIES 5 golt1ba (ENSSAUG00010009651) spx (ENSSAUG00010009646) gys2 (ENSSAUG00010009597) ENSSAUG00010009583 LDHB (ENSSAUG00010009579) slc25a3b (ENSSAUG00010009556) tmpoa (ENSSAUG00010009547) strap (ENSSAUG00010009539) ENSSAUG00010009532 large1 (ENSSAUG00010009223) ENSSAUG00010009212 ENSSAUG00010009206 braf (ENSSAUG00010002028) mrps33 (ENSSAUG00010001852) tmem178bb (ENSSAUG00010001846) mkrn1 (ENSSAUG00010001840) ##22 TMEM121B (ENSSAUG00010001828) ENSSAUG00010001820 arhgef39 (ENSSAUG00010001810) ENSSAUG00010001803 lmo3 (ENSSAUG00010001764) ENSSAUG00010001747 ENSSAUG00010001722 dera (ENSSAUG00010001657) lemd3 (ENSSAUG00010001468) sst1.1 (ENSSAUG00010001466) msrb3 (ENSSAUG00010001462) ENSSAUG00010001459 tmbim4 (ENSSAUG00010001452) ENSSAUG00010001446 ENSSAUG00010001443 Eupercaria_incertae_sedis ANCESTRAL SPECIES 34 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00940000162201.o.d ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT00390000017006 ENSGT00950000182818.B.a ENSGT00940000156380 ENSGT00390000007160.a.b ENSGT00940000161222 ENSGT00940000165013.b.b ENSGT00940000165013.a ENSGT01050000244940.b European seabass MODERN SPECIES 23 spx (ENSDLAG00005008585) ENSDLAG00005008471 LDHB (ENSDLAG00005008449) ENSDLAG00005008378 tmpoa (ENSDLAG00005033525) strap (ENSDLAG00005008293) ENSDLAG00005027506 ENSDLAG00005028377 ENSDLAG00005008113 ENSDLAG00005027427 braf (ENSDLAG00005003666) mrps33 (ENSDLAG00005007453) tmem178bb (ENSDLAG00005031060) cnot4b (ENSDLAG00005007474) ENSDLAG00005028106 mkrn1 (ENSDLAG00005007530) ##22 ENSDLAG00005027628 ENSDLAG00005035026 RERGL (ENSDLAG00005017446) ENSDLAG00005032283 arhgef39 (ENSDLAG00005007624) lmo3 (ENSDLAG00005031739) mgst1.1 (ENSDLAG00005007664) dera (ENSDLAG00005032839) ENSDLAG00005005938 ENSDLAG00005034434 ENSDLAG00005027377 ENSDLAG00005034498 ENSDLAG00005007704 ENSDLAG00005007752 ENSDLAG00005034297 Large yellow croaker MODERN SPECIES 149 mkrn1 (ENSLCRG00005018892) ##22 TMEM121B (ENSLCRG00005018895) ENSLCRG00005018900 rergla (ENSLCRG00005015064) arhgef39 (ENSLCRG00005015066) ENSLCRG00005015069 lmo3 (ENSLCRG00005015070) Percomorphaceae_D ANCESTRAL SPECIES 22 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000161222 ENSGT00390000006913 Carangaria ANCESTRAL SPECIES 22 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000161222 ENSGT00390000007160.a.b Pleuronectoidei ANCESTRAL SPECIES 37 ENSGT00940000155728.p ENSGT00940000157013 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT00940000163109 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000161222 ENSGT00390000007160.a.b Tongue sole MODERN SPECIES 18 gys2 (ENSCSEG00000015962) spx (ENSCSEG00000015985) ENSCSEG00000016014 ENSCSEG00000016028 slc25a3b (ENSCSEG00000016037) tmpoa (ENSCSEG00000016066) strap (ENSCSEG00000016092) ENSCSEG00000016112 large1 (ENSCSEG00000016130) ENSCSEG00000016141 ENSCSEG00000016145 braf (ENSCSEG00000016152) mrps33 (ENSCSEG00000016164) tmem178bb (ENSCSEG00000016168) LRRC8A (ENSCSEG00000016174) mkrn1 (ENSCSEG00000016188) ##22 TMEM121B (ENSCSEG00000016236) ENSCSEG00000016241 rergla (ENSCSEG00000016277) arhgef39 (ENSCSEG00000016283) lmo3 (ENSCSEG00000016294) MGST1 (ENSCSEG00000016310) MGST1 (ENSCSEG00000016306) dera (ENSCSEG00000016321) ENSCSEG00000016335 msrb3 (ENSCSEG00000016349) lemd3 (ENSCSEG00000016363) tmbim4 (ENSCSEG00000016391) asb13a.2 (ENSCSEG00000016401) net1 (ENSCSEG00000016414) rint1 (ENSCSEG00000016447) Turbot MODERN SPECIES 11 RECQL (ENSSMAG00000014910) golt1ba (ENSSMAG00000030415) spx (ENSSMAG00000014950) GYS2 (ENSSMAG00000014961) ENSSMAG00000015013 LDHB (ENSSMAG00000015058) tmpoa (ENSSMAG00000015088) strap (ENSSMAG00000015099) ENSSMAG00000015120 ENSSMAG00000011751 ENSSMAG00000015186 ENSSMAG00000034302 braf (ENSSMAG00000011113) mrps33 (ENSSMAG00000036615) tmem178bb (ENSSMAG00000011193) mkrn1 (ENSSMAG00000011223) ##22 ENSSMAG00000011239 ENSSMAG00000011259 ENSSMAG00000011296 COL25A1 (ENSSMAG00000011318) ETNPPL (ENSSMAG00000011357) OSTC (ENSSMAG00000025611) RPL34 (ENSSMAG00000011388) ENSSMAG00000011402 sepsecs (ENSSMAG00000011444) lgi2a (ENSSMAG00000011472) ENSSMAG00000011493 ENSSMAG00000032501 ccdc149a (ENSSMAG00000011517) ENSSMAG00000011559 ENSSMAG00000036898 Carangaria_A ANCESTRAL SPECIES 33 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b.p ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000161222 ENSGT00390000007160.a.b Seriola ANCESTRAL SPECIES 9 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000175894 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.j ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000155240.A ENSGT00940000157643 ENSGT01050000244940.b.p ENSGT00940000165013.a ENSGT00940000165013.b.b ENSGT00940000161222 ENSGT00390000007160.a.b Greater amberjack MODERN SPECIES 60 golt1ba (ENSSDUG00000019193) spx (ENSSDUG00000019181) ENSSDUG00000019174 gys2 (ENSSDUG00000019114) LDHB (ENSSDUG00000019076) slc25a3b (ENSSDUG00000019026) tmpoa (ENSSDUG00000018912) strap (ENSSDUG00000018859) ENSSDUG00000018823 large1 (ENSSDUG00000018748) mibp2 (ENSSDUG00000018725) braf (ENSSDUG00000018635) mrps33 (ENSSDUG00000018619) tmem178bb (ENSSDUG00000018607) cnot4b (ENSSDUG00000018585) mkrn1 (ENSSDUG00000018541) ##22 TMEM121B (ENSSDUG00000018536) ENSSDUG00000018488 rergla (ENSSDUG00000018471) arhgef39 (ENSSDUG00000018453) lmo3 (ENSSDUG00000018425) ENSSDUG00000018405 MGST1 (ENSSDUG00000018395) MGST1 (ENSSDUG00000018390) dera (ENSSDUG00000018354) ENSSDUG00000018336 msrb3 (ENSSDUG00000018306) lemd3 (ENSSDUG00000018267) tmbim4 (ENSSDUG00000018242) ENSSDUG00000018230 b2m (ENSSDUG00000018220) Yellowtail amberjack MODERN SPECIES 2976 golt1ba (ENSSLDG00000013955) spx (ENSSLDG00000013964) gys2 (ENSSLDG00000013980) ENSSLDG00000014028 LDHB (ENSSLDG00000014057) slc25a3b (ENSSLDG00000014102) tmpoa (ENSSLDG00000014155) strap (ENSSLDG00000014175) ENSSLDG00000014200 large1 (ENSSLDG00000014228) ENSSLDG00000014257 braf (ENSSLDG00000014276) mrps33 (ENSSLDG00000014314) tmem178bb (ENSSLDG00000014326) cnot4b (ENSSLDG00000014347) mkrn1 (ENSSLDG00000014411) ##22 TMEM121B (ENSSLDG00000014430) ENSSLDG00000014447 rergla (ENSSLDG00000014471) arhgef39 (ENSSLDG00000014494) lmo3 (ENSSLDG00000014515) MGST1 (ENSSLDG00000014540) MGST1 (ENSSLDG00000014556) Barramundi perch MODERN SPECIES 441 braf (ENSLCAG00010012711) mrps33 (ENSLCAG00010013245) tmem178bb (ENSLCAG00010013249) mkrn1 (ENSLCAG00010013251) ##22 ENSLCAG00010013255 ENSLCAG00010013256 rergla (ENSLCAG00010013257) Anabantaria ANCESTRAL SPECIES 21 ENSGT00940000155728.p ENSGT00940000157013 ENSGT00390000014507.a.b ENSGT00390000012501 ENSGT00390000018612.a.b ENSGT00670000099475 ENSGT00940000153525.i.a ENSGT00390000008708 ENSGT00940000154098.a.f ENSGT00940000155197 ENSGT00940000154471.a.b.a.b.u.b ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 Anabantoidei ANCESTRAL SPECIES 42 ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000007878 Climbing perch MODERN SPECIES 14 ENSATEG00000023097 braf (ENSATEG00000023130) mrps33 (ENSATEG00000023151) tmem178bb (ENSATEG00000029586) mkrn1 (ENSATEG00000023166) ##22 ENSATEG00000023176 ENSATEG00000023180 arhgef39 (ENSATEG00000023191) ENSATEG00000023197 lmo3 (ENSATEG00000029663) dera (ENSATEG00000023204) ENSATEG00000023211 ENSATEG00000023223 ENSATEG00000023241 ENSATEG00000026693 LDHB (ENSATEG00000023257) ENSATEG00000023288 GYS2 (ENSATEG00000023311) SPX (ENSATEG00000023332) GOLT1B (ENSATEG00000026665) Siamese fighting fish MODERN SPECIES 20 sult4a1 (ENSBSLG00000018795) pnpla3 (ENSBSLG00000018818) SNX4 (ENSBSLG00000018904) ttll12 (ENSBSLG00000019293) ENSBSLG00000019481 ENSBSLG00000019620 dennd5b (ENSBSLG00000019861) ENSBSLG00000020392 ipo8 (ENSBSLG00000020414) ENSBSLG00000020592 braf (ENSBSLG00000021285) mrps33 (ENSBSLG00000008227) tmem178bb (ENSBSLG00000008242) ENSBSLG00000008249 ENSBSLG00000008251 mkrn1 (ENSBSLG00000008265) ##22 TMEM121B (ENSBSLG00000008319) ENSBSLG00000008330 ENSBSLG00000008472 ENSBSLG00000008482 arhgef39 (ENSBSLG00000008488) ENSBSLG00000008517 ENSBSLG00000008524 lmo3 (ENSBSLG00000008530) dera (ENSBSLG00000008613) ENSBSLG00000008937 phlda1 (ENSBSLG00000008970) nap1l1 (ENSBSLG00000009045) OSBPL8 (ENSBSLG00000009400) zdhhc17 (ENSBSLG00000009631) csrp2 (ENSBSLG00000009949) Zig-zag eel MODERN SPECIES 15 RECQL (ENSMAMG00000023289) GOLT1B (ENSMAMG00000023288) SPX (ENSMAMG00000023287) GYS2 (ENSMAMG00000023286) ENSMAMG00000023285 LDHB (ENSMAMG00000023284) ENSMAMG00000026895 tmem178bb (ENSMAMG00000023280) ENSMAMG00000023279 braf (ENSMAMG00000023278) ENSMAMG00000023277 ENSMAMG00000023275 ENSMAMG00000023274 ENSMAMG00000023273 ENSMAMG00000023272 mkrn1 (ENSMAMG00000023271) ##22 ENSMAMG00000023270 ENSMAMG00000023269 lmo3 (ENSMAMG00000023266) dera (ENSMAMG00000023264) ENSMAMG00000023263 Cod MODERN SPECIES 17 ENSGMOG00000001167 ENSGMOG00000035268 ENSGMOG00000014678 ENSGMOG00000001916 braf (ENSGMOG00000013747) tmem178bb (ENSGMOG00000016245) cnot4b (ENSGMOG00000001329) ENSGMOG00000024954 ENSGMOG00000027725 ENSGMOG00000024180 ENSGMOG00000033145 ENSGMOG00000033277 ENSGMOG00000036237 ENSGMOG00000035479 ENSGMOG00000032371 mkrn1 (ENSGMOG00000001685) ##22 ENSGMOG00000001666 ENSGMOG00000036833 rergla (ENSGMOG00000026331) ENSGMOG00000023322 ENSGMOG00000034569 arhgef39 (ENSGMOG00000033472) dera (ENSGMOG00000014648) wif1 (ENSGMOG00000022185) ENSGMOG00000013710 msrb3 (ENSGMOG00000031722) ENSGMOG00000036050 ENSGMOG00000032922 ENSGMOG00000001315 kcnj8 (ENSGMOG00000001304) ENSGMOG00000001244 Protacanthopterygii ANCESTRAL SPECIES 115 ENSGT00390000004190.i ENSGT00940000154615.j ENSGT00390000004190.j ENSGT00440000035348 ENSGT00940000161105 ENSGT00940000160758 ENSGT00940000164299.b.a ENSGT00940000158576.a.a ENSGT00940000161860 ENSGT00390000017181 ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.i.b ENSGT00390000011980.a.i.a ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000155240.A ENSGT00940000157643 ENSGT00940000160401 ENSGT01050000244940.b ENSGT00940000165013.b.b Northern pike MODERN SPECIES 13 FUT9 (ENSELUG00000026673) ENSELUG00000026347 FUT9 (ENSELUG00000032126) GFUS (ENSELUG00000029921) GFUS (ENSELUG00000033703) FUT9 (ENSELUG00000031979) ENSELUG00000011351 ENSELUG00000024649 FUT9 (ENSELUG00000030896) GFUS (ENSELUG00000011397) B3GNT3 (ENSELUG00000011422) tmem178bb (ENSELUG00000011462) cnot4b (ENSELUG00000011540) ENSELUG00000033605 ENSELUG00000011560 mkrn1 (ENSELUG00000011572) ##22 TMEM121B (ENSELUG00000011583) ENSELUG00000011756 rergla (ENSELUG00000011805) arhgef39 (ENSELUG00000011852) lmo3 (ENSELUG00000001469) mgst1.1 (ENSELUG00000011967) dera (ENSELUG00000012050) ENSELUG00000012092 msrb3 (ENSELUG00000012135) lemd3 (ENSELUG00000012187) wif1 (ENSELUG00000012238) ENSELUG00000031825 tmbim4 (ENSELUG00000030724) B2MG (ENSELUG00000024345) b2ml (ENSELUG00000033258) Salmoninae ANCESTRAL SPECIES 174 ENSGT00390000006670 ENSGT00940000154615.j ENSGT00390000004190.i ENSGT00440000035348 ENSGT00940000161105 ENSGT00940000160758 ENSGT00940000164299.b.a.b ENSGT00940000158576.a.a ENSGT00940000161860 ENSGT00390000017181 ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.i.b ENSGT00390000011980.a.i.a ENSGT00390000007878 ENSGT01000000215012 ENSGT00940000155240.A.p.a ENSGT00940000157643 ENSGT00940000160401.d ENSGT01050000244940.b ENSGT00940000165013.b.b Salmoninae_a ANCESTRAL SPECIES 117 ENSGT00440000035348 ENSGT00940000161105.c ENSGT00940000160758.e ENSGT00940000161105.d ENSGT00940000160758.f ENSGT00940000164299.b.a.b ENSGT00940000158576.a.a ENSGT00940000161860 ENSGT00390000017181 ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401.sb ENSGT00390000011401.rb.a ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a.c ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c.e ENSGT00940000161146.e ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.i.b ENSGT00390000011980.a.i.a ENSGT00390000007878 ENSGT01000000215012.b ENSGT00940000160401.d ENSGT00940000180800 ENSGT01050000244940.b ENSGT00940000165013.b.b.l.b ENSGT00390000005182.j.f Salmo ANCESTRAL SPECIES 236 ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a.c ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c.e ENSGT00940000161146.e ENSGT00440000033863 ENSGT00940000153908.a ENSGT00390000011980.a.i.b ENSGT00390000011980.a.i.a ENSGT00390000007878 Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 26 ENSSSAG00000104608 ENSSSAG00000117591 RAP1B (ENSSSAG00000108948) NUP107 (ENSSSAG00000088921) slc35e3 (ENSSSAG00000005503) MDM2 (ENSSSAG00000059112) ENSSSAG00000114836 ENSSSAG00000087749 cpm (ENSSSAG00000109189) ENSSSAG00000101755 ENSSSAG00000054428 ENSSSAG00000094841 ENSSSAG00000087984 tmem178bb (ENSSSAG00000091615) cnot4b (ENSSSAG00000005396) mkrn1 (ENSSSAG00000121039) ##22 ENSSSAG00000114832 ENSSSAG00000039888 rergla (ENSSSAG00000091232) arhgef39 (ENSSSAG00000113727) lmo3 (ENSSSAG00000104871) mgst1.2 (ENSSSAG00000113372) dera (ENSSSAG00000115212) ENSSSAG00000041226 ENSSSAG00000108545 ENSSSAG00000006885 prl2 (ENSSSAG00000040151) ENSSSAG00000060415 ENSSSAG00000060344 ENSSSAG00000006535 ENSSSAG00000112871 Atlantic salmon MODERN SPECIES 8 ENSSSAG00000089402 MDM1 (ENSSSAG00000099387) ENSSSAG00000120044 ENSSSAG00000110991 ENSSSAG00000082352 NUP107 (ENSSSAG00000102466) slc35e3 (ENSSSAG00000102801) ENSSSAG00000102567 MDM2 (ENSSSAG00000098575) ENSSSAG00000087657 cpm (ENSSSAG00000092357) ENSSSAG00000115004 ENSSSAG00000085291 tmem178bb (ENSSSAG00000087016) cnot4b (ENSSSAG00000087788) mkrn1 (ENSSSAG00000009919) ##22 ENSSSAG00000094133 ENSSSAG00000117778 rergla (ENSSSAG00000105599) arhgef39 (ENSSSAG00000092205) lmo3 (ENSSSAG00000091720) mgst1.1 (ENSSSAG00000084048) mgst1.2 (ENSSSAG00000090362) dera (ENSSSAG00000087005) ENSSSAG00000083819 ENSSSAG00000090729 ENSSSAG00000081763 nel (ENSSSAG00000111159) prl2 (ENSSSAG00000093811) prl2 (ENSSSAG00000039981) ENSSSAG00000098218 River trout MODERN SPECIES 647 tmem178bb (ENSSTUG00000034469) cnot4b (ENSSTUG00000034486) cnot4b (ENSSTUG00000034510) mkrn1 (ENSSTUG00000034590) ##22 ENSSTUG00000034731 TMEM121B (ENSSTUG00000034739) ENSSTUG00000034743 rergla (ENSSTUG00000034800) ENSSTUG00000034811 ENSSTUG00000034825 arhgef39 (ENSSTUG00000034829) ENSSTUG00000034848 lmo3 (ENSSTUG00000034852) lmo3 (ENSSTUG00000034855) Oncorhynchus ANCESTRAL SPECIES 84 ENSGT00390000004190.j ENSGT00440000035348.s ENSGT00940000161105.c ENSGT00940000161105.d ENSGT00940000160758.f ENSGT00940000164299.b.a.b ENSGT00940000158576.a.a ENSGT00940000161860 ENSGT00390000017181 ENSGT00940000158497 ENSGT00940000156154 ENSGT00390000011401.sb ENSGT00390000011401.rb.a ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a.c ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a.i.b ENSGT00940000159018.c.e ENSGT00940000161146.e ENSGT00940000159331.b.q.a ENSGT00940000158219.b.m ENSGT00940000155474.p.b.m.b.a.b Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 13 ENSOMYG00000051683 gpr19 (ENSOMYG00000076711) crebl2 (ENSOMYG00000049623) ENSOMYG00000052854 dusp16 (ENSOMYG00000025813) ENSOMYG00000071958 ENSOMYG00000067357 ENSOMYG00000074712 ENSOMYG00000077034 ENSOMYG00000073227 ENSOMYG00000052729 ENSOMYG00000074363 ENSOMYG00000061296 tmem178bb (ENSOMYG00000059985) cnot4b (ENSOMYG00000064496) mkrn1 (ENSOMYG00000068993) ##22 ENSOMYG00000068315 ENSOMYG00000048352 rergla (ENSOMYG00000052036) ENSOMYG00000067807 arhgef39 (ENSOMYG00000049643) ENSOMYG00000059379 ENSOMYG00000068458 ENSOMYG00000054461 ninj2 (ENSOMYG00000070171) ENSOMYG00000061289 ENSOMYG00000051367 ENSOMYG00000026066 ENSOMYG00000076161 ENSOMYG00000065105 PHTF2 (ENSOMYG00000011407) Rainbow trout MODERN SPECIES 6 ENSOMYG00000063293 ENSOMYG00000049473 braf (ENSOMYG00000062844) ENSOMYG00000062278 ENSOMYG00000048376 MRPS33 (ENSOMYG00000050367) ENSOMYG00000054505 ENSOMYG00000065145 ENSOMYG00000059760 ENSOMYG00000025620 ENSOMYG00000045570 ENSOMYG00000051075 tmem178bb (ENSOMYG00000072100) ENSOMYG00000051422 cnot4b (ENSOMYG00000067023) mkrn1 (ENSOMYG00000072624) ##22 ENSOMYG00000062678 ENSOMYG00000026141 rergla (ENSOMYG00000052730) ENSOMYG00000059849 arhgef39 (ENSOMYG00000055613) ENSOMYG00000067961 ENSOMYG00000056619 ENSOMYG00000055817 ENSOMYG00000057296 ENSOMYG00000049498 ENSOMYG00000035890 ENSOMYG00000063194 ENSOMYG00000054805 ENSOMYG00000063937 ENSOMYG00000060328 Oncorhynchus_a ANCESTRAL SPECIES 154 ENSGT00940000158420 ENSGT00440000039984.b.g ENSGT00940000154814.b.nc.a ENSGT00390000007890.t ENSGT00940000155911 ENSGT00390000006670 ENSGT00940000154615.j ENSGT00390000004190.i ENSGT00440000035348.t ENSGT01030000236451 ENSGT00940000156154 ENSGT00390000011401.sb ENSGT00390000011401.rb.a ENSGT00390000015299.a.b.b.a ENSGT00390000000068.a.a.c ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a.i.b ENSGT00940000159018.c.f Coho salmon DUPLICATION Coho salmon MODERN SPECIES 1412 ENSOKIG00005049997 ENSOKIG00005049986 TMEM178B (ENSOKIG00005049978) ENSOKIG00005049970 CNOT4 (ENSOKIG00005049966) ENSOKIG00005049965 ##22 Coho salmon MODERN SPECIES 37 ENSOKIG00005045488 ENSOKIG00005045483 ENSOKIG00005045477 KCNA5 (ENSOKIG00005045469) ENSOKIG00005045444 ENSOKIG00005045402 ENSOKIG00005045383 ENSOKIG00005045341 ENSOKIG00005045336 ENSOKIG00005045333 braf (ENSOKIG00005045074) mrps33 (ENSOKIG00005045020) tmem178bb (ENSOKIG00005045010) ENSOKIG00005045001 cnot4b (ENSOKIG00005044991) mkrn1 (ENSOKIG00005044969) ##22 TMEM121B (ENSOKIG00005044960) ENSOKIG00005044942 rergla (ENSOKIG00005044923) ENSOKIG00005044910 arhgef39 (ENSOKIG00005044902) ENSOKIG00005044900 lmo3 (ENSOKIG00005044894) ENSOKIG00005044884 ENSOKIG00005044881 MGST1 (ENSOKIG00005044868) DERA (ENSOKIG00005044716) ENSOKIG00005044690 ENSOKIG00005044682 msrb3 (ENSOKIG00005044667) lemd3 (ENSOKIG00005044640) Huchen DUPLICATION Huchen MODERN SPECIES 2773 cnot4b (ENSHHUG00000003145) ENSHHUG00000003273 ##22 Huchen MODERN SPECIES 8075 ENSHHUG00000000665 ##22 TMEM121B (ENSHHUG00000000664) ENSHHUG00000000631 Osteoglossiformes ANCESTRAL SPECIES 445 ENSGT00940000156154 ENSGT00390000000068.c ENSGT00940000162201.o.d ENSGT00390000007427 ENSGT00950000183077.a.a ##22 ENSGT00940000154822.a ENSGT00940000159018.c ENSGT00940000161146 P. kingsleyae MODERN SPECIES 162 ENSPKIG00000000391 mkrn1 (ENSPKIG00000000407) ##22 ENSPKIG00000000428 rergla (ENSPKIG00000000440) optn (ENSPKIG00000000456) mcm10 (ENSPKIG00000000479) mterf2 (ENSPKIG00000000498) osgep (ENSPKIG00000000526) CHRM2 (ENSPKIG00000000565) pex26 (ENSPKIG00000000583) itfg2 (ENSPKIG00000000624) CD9 (ENSPKIG00000000652) ENSPKIG00000000732 ENSPKIG00000000752 ntf3 (ENSPKIG00000000760) mtpn (ENSPKIG00000000782) ENSPKIG00000000802 Asian bonytongue MODERN SPECIES 16 PRPS1L1 (ENSSFOG00015027822) ENSSFOG00015017638 ENSSFOG00015017623 kcnc2 (ENSSFOG00015017598) ENSSFOG00015017547 ENSSFOG00015017535 KCNA1 (ENSSFOG00015028382) KCNA5 (ENSSFOG00015017502) ENSSFOG00015017460 large1 (ENSSFOG00015017446) braf (ENSSFOG00015017340) tmem178bb (ENSSFOG00015030519) CNOT4 (ENSSFOG00015017285) ENSSFOG00015017197 zgc:136858 (ENSSFOG00015017135) mkrn1 (ENSSFOG00015017095) ##22 TMEM121B (ENSSFOG00015017087) ENSSFOG00015017045 rergla (ENSSFOG00015017026) ENSSFOG00015018707 mdm2 (ENSSFOG00015017016) slc35e3 (ENSSFOG00015028141) nup107 (ENSSFOG00015016836) ENSSFOG00015001738 mdm1 (ENSSFOG00015016724) ENSSFOG00015016709 ENSSFOG00015016693 ENSSFOG00015032789 ENSSFOG00015030333 dyrk2 (ENSSFOG00015001792) cand1 (ENSSFOG00015016615) Spotted gar MODERN SPECIES 674 lrrk2 (ENSLOCG00000016102) ENSLOCG00000016103 ENSLOCG00000016106 ENSLOCG00000016108 ENSLOCG00000016110 KCNA1 (ENSLOCG00000017909) ENSLOCG00000017910 ENSLOCG00000016111 large1 (ENSLOCG00000016113) braf (ENSLOCG00000016118) mrps33 (ENSLOCG00000016124) tmem178ba (ENSLOCG00000016125) cnot4b (ENSLOCG00000016126) ENSLOCG00000017911 zgc:136858 (ENSLOCG00000016131) mkrn1 (ENSLOCG00000016132) ##22 TMEM121B (ENSLOCG00000017912) ENSLOCG00000016133 rergla (ENSLOCG00000016134) arhgef39 (ENSLOCG00000016136) ENSLOCG00000016139 lmo3 (ENSLOCG00000016141) mgst1.1 (ENSLOCG00000016144) SLC15A5 (ENSLOCG00000016146) dera (ENSLOCG00000016147) msrb3 (ENSLOCG00000016150) lemd3 (ENSLOCG00000016151) wif1 (ENSLOCG00000016154) vhll (ENSLOCG00000016159) tmbim4 (ENSLOCG00000016160) IRAK3 (ENSLOCG00000016164) Reedfish MODERN SPECIES vwf (ENSECRG00000003706) cd9a (ENSECRG00000003690) cwf19l1 (ENSECRG00000003680) ENSECRG00000003659 GNL1 (ENSECRG00000003632) flot1b (ENSECRG00000003603) ENSECRG00000003585 PTPRO (ENSECRG00000003533) EPS8 (ENSECRG00000003487) ppp1r10 (ENSECRG00000003456) ENSECRG00000003443 abcf1 (ENSECRG00000003413) ENSECRG00000003396 ENSECRG00000003381 ENSECRG00000003369 mkrn1 (ENSECRG00000003363) ##22 ENSECRG00000003353 zgc:136858 (ENSECRG00000003340) ENSECRG00000003326 TMEM121B (ENSECRG00000003320) ENSECRG00000003296 ENSECRG00000003276 ENSECRG00000003260 agk (ENSECRG00000003233) dennd11 (ENSECRG00000003205) wee2 (ENSECRG00000003186) bcl2l13 (ENSECRG00000003176) atp6v1e1a (ENSECRG00000003161) ninj2 (ENSECRG00000003141) ENSECRG00000003130 WNK1 (ENSECRG00000003091) Elephant shark MODERN SPECIES 1548 stmp1 (ENSCMIG00000019818) dennd11 (ENSCMIG00000019815) ENSCMIG00000019813 ENSCMIG00000019812 IQSEC3 (ENSCMIG00000019811) ENSCMIG00000019809 ENSCMIG00000019808 wash1 (ENSCMIG00000019806) rtcb (ENSCMIG00000019804) FBXO7 (ENSCMIG00000019802) TIMP3 (ENSCMIG00000019801) SYN3 (ENSCMIG00000019800) zgc:136858 (ENSCMIG00000019799) ENSCMIG00000019796 ttc38 (ENSCMIG00000019765) mkrn1 (ENSCMIG00000019743) ##22 rad52 (ENSCMIG00000019742) erc1a (ENSCMIG00000019737) fbxl14a (ENSCMIG00000019733) wnt5b (ENSCMIG00000019732) adipor2 (ENSCMIG00000019731) LRTM2 (ENSCMIG00000019729) CACNA2D4 (ENSCMIG00000019715) ENSCMIG00000019702 ENSCMIG00000019701 Bilateria ANCESTRAL SPECIES ENSGT00950000183077.b ##22 Chordata ANCESTRAL SPECIES ENSGT00950000183077.b ##22 Vertebrata ANCESTRAL SPECIES ENSGT00950000183077.b ##22 Gnathostomata ANCESTRAL SPECIES 111 ENSGT00940000156720 ENSGT00440000034918 ENSGT00950000182973.a.c.a ENSGT00950000182973.a.c.b ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 Elephant shark MODERN SPECIES 1518 ENSCMIG00000017548 rps10 (ENSCMIG00000017547) pacsin1b (ENSCMIG00000017543) SPDEF (ENSCMIG00000017538) ilrun (ENSCMIG00000017534) BLTP3A (ENSCMIG00000017530) taf11 (ENSCMIG00000017523) ANKS1A (ENSCMIG00000017510) TCP11X2 (ENSCMIG00000017496) scube3 (ENSCMIG00000017453) ENSCMIG00000017411 ENSCMIG00000017410 ENSCMIG00000017408 def6a (ENSCMIG00000017397) ppardb (ENSCMIG00000017376) ENSCMIG00000017369 ##22 ENSCMIG00000017362 ENSCMIG00000017267 ENSCMIG00000017209 dclre1b (ENSCMIG00000017203) ap4b1 (ENSCMIG00000017194) HIPK1 (ENSCMIG00000017189) mcee (ENSCMIG00000017183) olfml3a (ENSCMIG00000017182) DCAF8 (ENSCMIG00000017173) ENSCMIG00000017166 ENSCMIG00000017161 Euteleostomi ANCESTRAL SPECIES 120 ENSGT00390000009166 ENSGT00940000155580.a.a ENSGT00440000034918 ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000159117 ENSGT00940000177211 Sarcopterygii ANCESTRAL SPECIES 137 ENSGT00940000157392 ENSGT00940000154089.a ENSGT00440000034918 ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000159117 ENSGT00940000177211 ENSGT00940000155580.a.a ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 Tetrapoda ANCESTRAL SPECIES 98 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918 ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000159117 ENSGT00940000177211 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000160682.a Amniota ANCESTRAL SPECIES 26 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000159117 ENSGT00940000177211 ENSGT00950000185408 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 Sauria ANCESTRAL SPECIES 24 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.d ENSGT00940000159117 ENSGT00940000177211 ENSGT00950000185408 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 Lepidosauria ANCESTRAL SPECIES 56 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.c.a ENSGT00390000008767.d ENSGT00940000159117 ENSGT00950000185408 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT00940000155325 ENSGT00940000159584 Episquamata ANCESTRAL SPECIES 1 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00960000190239 ENSGT00470000042297 ENSGT00940000158700 ENSGT00940000160187 ENSGT00940000159691 ENSGT00940000160626 ENSGT00940000163644.e.b ENSGT00940000163644.e.a ENSGT00940000164965 ENSGT00940000159495 ENSGT00940000153629.b ENSGT00390000002376 ENSGT00940000157997 ENSGT00390000002060 Toxicofera ANCESTRAL SPECIES 1 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00960000190239 ENSGT00470000042297 ENSGT00940000158700 ENSGT00940000160187 ENSGT00940000159691 ENSGT00940000160626 ENSGT00940000163644.e.b ENSGT00940000163644.e.a ENSGT00940000164965 ENSGT00940000159495 ENSGT00940000153629.b ENSGT00390000002376 ENSGT00940000157997 ENSGT00390000002060 Elapidae ANCESTRAL SPECIES 1 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00960000190239 ENSGT00470000042297 ENSGT00940000158700 ENSGT00940000160187 ENSGT00940000159691 ENSGT00940000163644.f.b.b ENSGT00940000163644.f.a ENSGT00940000164965 ENSGT00940000159495 ENSGT00940000153629.b ENSGT00390000002376 ENSGT00940000157997 ENSGT00390000002060 ENSGT00390000007241 Elapidae_a ANCESTRAL SPECIES 57 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00610000087427 ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00960000190239 ENSGT00470000042297 ENSGT00940000158700 ENSGT00940000160187 ENSGT00940000159691 Acanthophiinae ANCESTRAL SPECIES 5 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00610000087427 ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00960000190239 ENSGT00470000042297 ENSGT00940000158700 ENSGT00940000160187 ENSGT00940000159691 Eastern brown snake MODERN SPECIES 130 NUDT3 (ENSPTXG00000017559) RPS10 (ENSPTXG00000017558) PACSIN1 (ENSPTXG00000017557) SPDEF (ENSPTXG00000017556) ILRUN (ENSPTXG00000017555) SNRPC (ENSPTXG00000017554) BLTP3A (ENSPTXG00000017553) ENSPTXG00000017551 ANKS1A (ENSPTXG00000015270) ENSPTXG00000015256 ENSPTXG00000015253 SCUBE3 (ENSPTXG00000015243) ZNF76 (ENSPTXG00000015237) DEF6 (ENSPTXG00000015232) PPARD (ENSPTXG00000015228) ENSPTXG00000015225 ##22 ENSPTXG00000015224 ENSPTXG00000015223 ENSPTXG00000015221 FOXP4 (ENSPTXG00000015218) MDFI (ENSPTXG00000015216) TFEB (ENSPTXG00000015212) Mainland tiger snake MODERN SPECIES 131 NUDT3 (ENSNSUG00000011919) RPS10 (ENSNSUG00000011918) PACSIN1 (ENSNSUG00000011916) SPDEF (ENSNSUG00000011915) ILRUN (ENSNSUG00000011914) SNRPC (ENSNSUG00000011913) BLTP3A (ENSNSUG00000011912) ENSNSUG00000011911 ANKS1A (ENSNSUG00000011910) ENSNSUG00000011909 SCUBE3 (ENSNSUG00000011908) ENSNSUG00000011907 DEF6 (ENSNSUG00000011906) ENSNSUG00000011905 PPARD (ENSNSUG00000011904) ENSNSUG00000011903 ##22 FANCE (ENSNSUG00000011902) ENSNSUG00000011901 TREM2 (ENSNSUG00000011900) FOXP4 (ENSNSUG00000011899) MDFI (ENSNSUG00000011898) TFEB (ENSNSUG00000011897) Blue-lipped sea krait MODERN SPECIES 2818 DEF6 (ENSLLTG00000001343) ENSLLTG00000001350 PPARD (ENSLLTG00000001355) ENSLLTG00000001365 ##22 FANCE (ENSLLTG00000001375) Indian cobra MODERN SPECIES 2 SMIM29 (ENSNNAG00000005577) NUDT3 (ENSNNAG00000005555) RPS10 (ENSNNAG00000005537) PACSIN1 (ENSNNAG00000005506) SPDEF (ENSNNAG00000005492) ILRUN (ENSNNAG00000005463) ENSNNAG00000005441 BLTP3A (ENSNNAG00000005397) ENSNNAG00000005382 ANKS1A (ENSNNAG00000005133) ENSNNAG00000004778 SCUBE3 (ENSNNAG00000004594) ZNF76 (ENSNNAG00000004552) DEF6 (ENSNNAG00000004512) PPARD (ENSNNAG00000004475) ENSNNAG00000004438 ##22 FANCE (ENSNNAG00000004388) ENSNNAG00000004362 TREM2 (ENSNNAG00000004340) FOXP4 (ENSNNAG00000004269) MDFI (ENSNNAG00000004235) ENSNNAG00000004182 TFEB (ENSNNAG00000004152) ENSNNAG00000004111 ENSNNAG00000004027 ENSNNAG00000003963 ENSNNAG00000003912 ENSNNAG00000003860 FRS3 (ENSNNAG00000003819) ENSNNAG00000003795 TOMM6 (ENSNNAG00000003783) Lizard MODERN SPECIES 3 ENSACAG00000015886 PACSIN1 (ENSACAG00000015801) SPDEF (ENSACAG00000015770) ENSACAG00000037538 ILRUN (ENSACAG00000015742) SNRPC (ENSACAG00000015721) BLTP3A (ENSACAG00000001504) ENSACAG00000001573 ANKS1A (ENSACAG00000001592) ENSACAG00000001834 ENSACAG00000040370 ENSACAG00000035209 SCUBE3 (ENSACAG00000001947) DEF6 (ENSACAG00000002129) PPARD (ENSACAG00000002228) ENSACAG00000002322 ##22 FANCE (ENSACAG00000002350) ENSACAG00000002359 ENSACAG00000042047 ENSACAG00000015952 ENSACAG00000037449 ENSACAG00000039727 FOXP4 (ENSACAG00000002366) ENSACAG00000002660 MDFI (ENSACAG00000002662) TFEB (ENSACAG00000002664) PGC (ENSACAG00000002730) ENSACAG00000036286 ENSACAG00000027343 ENSACAG00000024788 ENSACAG00000035684 Laterata ANCESTRAL SPECIES 3 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00960000190239 ENSGT00470000042297 ENSGT00940000158700 ENSGT00940000160187 ENSGT00940000159691 ENSGT00940000160626 ENSGT00940000163644.e.b ENSGT00940000163644.e.a ENSGT00940000164965 ENSGT00940000159495 ENSGT00940000153629.b ENSGT00390000002376 ENSGT00940000157997 ENSGT00390000002060 Argentine black and white tegu MODERN SPECIES 16 NUDT3 (ENSSMRG00000000821) RPS10 (ENSSMRG00000000829) PACSIN1 (ENSSMRG00000000840) SPDEF (ENSSMRG00000000860) ILRUN (ENSSMRG00000000912) SNRPC (ENSSMRG00000000931) BLTP3A (ENSSMRG00000000949) ENSSMRG00000000997 ANKS1A (ENSSMRG00000001033) ENSSMRG00000001079 ENSSMRG00000001082 SCUBE3 (ENSSMRG00000001879) ZNF76 (ENSSMRG00000001933) DEF6 (ENSSMRG00000001956) PPARD (ENSSMRG00000001965) ENSSMRG00000002029 ##22 FANCE (ENSSMRG00000002032) ENSSMRG00000002038 ENSSMRG00000002042 FOXP4 (ENSSMRG00000002152) ENSSMRG00000002169 MDFI (ENSSMRG00000002177) ENSSMRG00000002181 TFEB (ENSSMRG00000002190) PGC (ENSSMRG00000002198) ENSSMRG00000002276 ENSSMRG00000002283 ENSSMRG00000002300 ENSSMRG00000002290 FRS3 (ENSSMRG00000002305) TOMM6 (ENSSMRG00000002342) tuatara MODERN SPECIES 1574 SCUBE3 (ENSSPUG00000013603) ZNF76 (ENSSPUG00000013727) DEF6 (ENSSPUG00000013785) PPARD (ENSSPUG00000013798) ENSSPUG00000013809 ##22 FANCE (ENSSPUG00000013816) RPL10A (ENSSPUG00000013829) MICAL1 (ENSSPUG00000013837) SMPD2 (ENSSPUG00000013852) TEAD3 (ENSSPUG00000013858) TULP1 (ENSSPUG00000013872) FKBP5 (ENSSPUG00000013887) CLPS (ENSSPUG00000013914) LHFPL5 (ENSSPUG00000013919) SRPK1 (ENSSPUG00000013943) Archelosauria ANCESTRAL SPECIES 22 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00390000008767.c.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.d ENSGT00940000159117 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00960000189982 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 Archosauria ANCESTRAL SPECIES 23 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00390000008767.c.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.d ENSGT00940000159117 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Aves ANCESTRAL SPECIES 25 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00390000008767.d ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00940000159117 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000160682.a Neognathae ANCESTRAL SPECIES 24 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00390000008767.d ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00940000159117 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000160682.a Galloanserae ANCESTRAL SPECIES 28 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00390000008767.d ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00940000159117 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000157472 Anatidae ANCESTRAL SPECIES 38 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00390000008767.d ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00940000159117 ENSGT00390000009166 ENSGT00950000182956.a ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000157472.k Pink-footed goose MODERN SPECIES 237 NUDT3 (ENSABRG00000011504) RPS10 (ENSABRG00000011511) PACSIN1 (ENSABRG00000011521) SPDEF (ENSABRG00000011532) ILRUN (ENSABRG00000011537) ENSABRG00000011549 BLTP3A (ENSABRG00000011558) ENSABRG00000011563 ANKS1A (ENSABRG00000011633) ENSABRG00000012693 SCUBE3 (ENSABRG00000012752) RPL10A (ENSABRG00000013328) ZNF76 (ENSABRG00000013332) DEF6 (ENSABRG00000013347) PPARD (ENSABRG00000013359) ENSABRG00000013381 ##22 FANCE (ENSABRG00000013418) MICAL1 (ENSABRG00000013423) SMPD2 (ENSABRG00000013435) ENSABRG00000013474 TULP1 (ENSABRG00000013501) FKBP5 (ENSABRG00000013508) Phasianidae ANCESTRAL SPECIES 22 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00390000008767.d ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000007725.A.b ENSGT00940000157504 ENSGT00940000158152 ENSGT00390000003368 ENSGT00940000163318 ENSGT00390000018003.a ENSGT00390000016950.a ENSGT00940000158947 ENSGT00950000183011.c.a.a ENSGT00950000182931.B.a.b ENSGT00390000014494 ENSGT00940000156361.B ENSGT00940000157665 ENSGT00940000158083 Phasianidae_b ANCESTRAL SPECIES 22 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792.d ENSGT00940000153185.a.a.b ENSGT00390000008767.d ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000007725.A.b ENSGT00940000157504 ENSGT00940000158152 ENSGT00390000003368 ENSGT00940000163318 ENSGT00390000018003.a ENSGT00390000016950.a ENSGT00940000158947 ENSGT00950000183011.c.a.a ENSGT00950000182931.B.a.b ENSGT00390000014494 ENSGT00940000156361.B ENSGT00940000157665 ENSGT00940000158083 Chicken MODERN SPECIES 18 NUDT3 (ENSGALG00010026184) RPS10 (ENSGALG00010026148) PACSIN1 (ENSGALG00010026124) SPDEF (ENSGALG00010026109) C6orf106 (ENSGALG00010026094) SNRPC (ENSGALG00010026088) BLTP3A (ENSGALG00010026068) TAF11 (ENSGALG00010026051) ANKS1A (ENSGALG00010026001) ENSGALG00010025941 SCUBE3 (ENSGALG00010025917) RPL10A (ENSGALG00010025904) ZNF76 (ENSGALG00010025887) DEF6 (ENSGALG00010025847) PPARD (ENSGALG00010027545) ENSGALG00010027527 ##22 FANCE (ENSGALG00010027520) NGF (ENSGALG00010025423) TSPAN2 (ENSGALG00010025398) TSHB (ENSGALG00010025394) SYCP1 (ENSGALG00010025384) ENSGALG00010025369 SIKE1 (ENSGALG00010025365) CSDE1 (ENSGALG00010025544) NRAS (ENSGALG00010025512) AMPD1 (ENSGALG00010025504) DENND2C (ENSGALG00010025485) BCAS2 (ENSGALG00010025458) TRIM33 (ENSGALG00010025452) SYT6 (ENSGALG00010025434) OLFML3 (ENSGALG00010025357) Neognathae_b ANCESTRAL SPECIES 24 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00390000008767.d ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00940000159117 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000160682.a ENSGT00940000157472 ENSGT00940000153394.c.a.g.a.a.a Passeriformes ANCESTRAL SPECIES 21 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000153185.a.a.b ENSGT00390000008767.d ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00940000159117 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000157472 ENSGT00390000011648.b ENSGT00390000001969.a Great tit MODERN SPECIES 19 NUDT3 (ENSPMJG00000012522) PACSIN1 (ENSPMJG00000012521) SPDEF (ENSPMJG00000012520) RPS10 (ENSPMJG00000012519) ILRUN (ENSPMJG00000012517) SNRPC (ENSPMJG00000012516) BLTP3A (ENSPMJG00000012515) ENSPMJG00000012514 ANKS1A (ENSPMJG00000012513) SCUBE3 (ENSPMJG00000012391) RPL10A (ENSPMJG00000012390) ENSPMJG00000012389 ENSPMJG00000012388 DEF6 (ENSPMJG00000012387) PPARD (ENSPMJG00000012386) ENSPMJG00000012385 ##22 FANCE (ENSPMJG00000012384) ENSPMJG00000012383 MICAL1 (ENSPMJG00000012382) SMPD2 (ENSPMJG00000012381) TEAD3 (ENSPMJG00000012380) TULP1 (ENSPMJG00000012378) FKBP5 (ENSPMJG00000012377) CLPS (ENSPMJG00000012375) LHFPL5 (ENSPMJG00000012374) SRPK1 (ENSPMJG00000012373) MAPK14 (ENSPMJG00000012371) MAPK13 (ENSPMJG00000012370) BRPF3 (ENSPMJG00000012369) TBC1D22B (ENSPMJG00000012368) PHTF1 (ENSPMJG00000011996) Passeriformes_d ANCESTRAL SPECIES 21 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000153185.a.a.b ENSGT00390000008767.d ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00940000159117 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000157472 ENSGT00390000011648.b ENSGT00390000001969.a Passeriformes_g ANCESTRAL SPECIES 24 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000153185.a.a.b ENSGT00390000008767.d ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00940000159117 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000157472 ENSGT00390000011648.b ENSGT00390000001969.a Passeroidea ANCESTRAL SPECIES 24 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000153185.a.a.b ENSGT00390000008767.d ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00940000159117 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000157472 ENSGT00390000011648.b ENSGT00390000001969.a Zebra finch MODERN SPECIES 19 ENSTGUG00000022185 NUDT3 (ENSTGUG00000025458) RPS10 (ENSTGUG00000001782) SPDEF (ENSTGUG00000001781) PACSIN1 (ENSTGUG00000013694) ILRUN (ENSTGUG00000001777) SNRPC (ENSTGUG00000001773) BLTP3A (ENSTGUG00000001768) TAF11 (ENSTGUG00000001766) ANKS1A (ENSTGUG00000001756) SCUBE3 (ENSTGUG00000001750) RPL10A (ENSTGUG00000001749) ZNF76 (ENSTGUG00000001745) DEF6 (ENSTGUG00000001738) PPARD (ENSTGUG00000001735) ENSTGUG00000001733 ##22 FANCE (ENSTGUG00000001732) ENSTGUG00000027374 MICAL1 (ENSTGUG00000001721) SMPD2 (ENSTGUG00000001713) TEAD3 (ENSTGUG00000001691) TULP1 (ENSTGUG00000001686) FKBP5 (ENSTGUG00000001670) CLPS (ENSTGUG00000021840) LHFPL5 (ENSTGUG00000001662) SRPK1 (ENSTGUG00000001648) MAPK14 (ENSTGUG00000001633) MAPK13 (ENSTGUG00000001624) BRPF3 (ENSTGUG00000001612) TBC1D22B (ENSTGUG00000001592) PHTF1 (ENSTGUG00000001583) Common canary MODERN SPECIES 62 NUDT3 (ENSSCAG00000015988) RPS10 (ENSSCAG00000015987) PACSIN1 (ENSSCAG00000015981) SPDEF (ENSSCAG00000015977) ILRUN (ENSSCAG00000015976) SNRPC (ENSSCAG00000015974) BLTP3A (ENSSCAG00000015969) ENSSCAG00000015962 ANKS1A (ENSSCAG00000015899) SCUBE3 (ENSSCAG00000015844) ENSSCAG00000015837 RPL10A (ENSSCAG00000015835) ZNF76 (ENSSCAG00000015828) DEF6 (ENSSCAG00000015827) PPARD (ENSSCAG00000015824) ENSSCAG00000015820 ##22 ENSSCAG00000015815 ENSSCAG00000015810 MICAL1 (ENSSCAG00000015777) SMPD2 (ENSSCAG00000015767) TEAD3 (ENSSCAG00000015763) TULP1 (ENSSCAG00000015756) FKBP5 (ENSSCAG00000015748) CLPS (ENSSCAG00000015746) LHFPL5 (ENSSCAG00000015744) SRPK1 (ENSSCAG00000015738) MAPK14 (ENSSCAG00000015730) MAPK13 (ENSSCAG00000015726) BRPF3 (ENSSCAG00000015721) TBC1D22B (ENSSCAG00000015715) PHTF1 (ENSSCAG00000015710) Medium ground finch MODERN SPECIES 215 ENSGFOG00000012076 NUDT3 (ENSGFOG00000012072) ENSGFOG00000012068 PACSIN1 (ENSGFOG00000012062) ILRUN (ENSGFOG00000012059) SNRPC (ENSGFOG00000012057) BLTP3A (ENSGFOG00000012052) ANKS1A (ENSGFOG00000010716) SCUBE3 (ENSGFOG00000009691) RPL10A (ENSGFOG00000009647) ENSGFOG00000009644 ZNF76 (ENSGFOG00000009638) ENSGFOG00000009636 DEF6 (ENSGFOG00000009628) PPARD (ENSGFOG00000009620) ENSGFOG00000009611 ##22 FANCE (ENSGFOG00000009601) USP49 (ENSGFOG00000009579) ENSGFOG00000009573 BYSL (ENSGFOG00000009563) CCND3 (ENSGFOG00000009526) TAF8 (ENSGFOG00000009515) ENSGFOG00000009492 ENSGFOG00000009465 ENSGFOG00000009450 BTG2 (ENSGFOG00000009444) FMOD (ENSGFOG00000009435) African ostrich MODERN SPECIES 505 ENSSCUG00000005959 ENSSCUG00000005961 GRM4 (ENSSCUG00000005965) NUDT3 (ENSSCUG00000005966) RPS10 (ENSSCUG00000005968) PACSIN1 (ENSSCUG00000005970) ILRUN (ENSSCUG00000005972) ENSSCUG00000005973 BLTP3A (ENSSCUG00000005976) ENSSCUG00000005990 ANKS1A (ENSSCUG00000006006) ENSSCUG00000006009 RPL10A (ENSSCUG00000006016) ZNF76 (ENSSCUG00000006018) PPARD (ENSSCUG00000006020) ENSSCUG00000006021 ##22 FANCE (ENSSCUG00000006023) Australian saltwater crocodile MODERN SPECIES 53 NUDT3 (ENSCPRG00005014140) ENSCPRG00005014145 PACSIN1 (ENSCPRG00005014146) SPDEF (ENSCPRG00005014151) ILRUN (ENSCPRG00005014159) SNRPC (ENSCPRG00005014161) BLTP3A (ENSCPRG00005014167) ENSCPRG00005014174 ANKS1A (ENSCPRG00005014190) ENSCPRG00005014273 SCUBE3 (ENSCPRG00005014284) ENSCPRG00005014319 ZNF76 (ENSCPRG00005014331) DEF6 (ENSCPRG00005014336) PPARD (ENSCPRG00005014343) ENSCPRG00005014350 ##22 FANCE (ENSCPRG00005014369) ENSCPRG00005014386 MICAL1 (ENSCPRG00005014392) ENSCPRG00005014400 NGF (ENSCPRG00005014402) TSPAN2 (ENSCPRG00005014404) ENSCPRG00005014408 TSHB (ENSCPRG00005014414) ENSCPRG00005014420 ENSCPRG00005014428 SIKE1 (ENSCPRG00005014439) CSDE1 (ENSCPRG00005014495) NRAS (ENSCPRG00005014778) AMPD1 (ENSCPRG00005014786) DENND2C (ENSCPRG00005014788) Cryptodira ANCESTRAL SPECIES 27 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00390000008767.d ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00940000159117 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00960000189982 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Testudinoidea ANCESTRAL SPECIES 22 ENSGT00940000157882 ENSGT00440000034918.r.cb ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00390000008767.c.b ENSGT00940000160911.e ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00940000159117 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00960000189982 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Emydidae ANCESTRAL SPECIES 25 ENSGT00940000157882 ENSGT00440000034918.r.bb ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00390000008767.c.a ENSGT00940000160911.e ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00940000159117 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000160682.a painted turtle MODERN SPECIES 1026 ZNF76 (ENSCPBG00000017903) DEF6 (ENSCPBG00000017887) PPARD (ENSCPBG00000017878) ENSCPBG00000017873 ##22 FANCE (ENSCPBG00000017868) ENSCPBG00000017863 RPL10A (ENSCPBG00000017861) ENSCPBG00000017853 MICAL1 (ENSCPBG00000017842) SMPD2 (ENSCPBG00000017837) TEAD3 (ENSCPBG00000017820) ENSCPBG00000017810 TULP1 (ENSCPBG00000017805) FKBP5 (ENSCPBG00000017798) ENSCPBG00000017791 CLPS (ENSCPBG00000017786) LHFPL5 (ENSCPBG00000017783) SRPK1 (ENSCPBG00000017768) SLC26A8 (ENSCPBG00000017752) Testudinidae ANCESTRAL SPECIES 26 ENSGT00940000157882 ENSGT00440000034918.r.cb ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00390000008767.c.b ENSGT00940000160911.e ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00940000159117 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00960000189982 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Goode s thornscrub tortoise MODERN SPECIES 18 NUDT3 (ENSGEVG00005003006) ENSGEVG00005002990 PACSIN1 (ENSGEVG00005002971) SPDEF (ENSGEVG00005002951) ILRUN (ENSGEVG00005002910) SNRPC (ENSGEVG00005002884) BLTP3A (ENSGEVG00005002842) ENSGEVG00005002812 ANKS1A (ENSGEVG00005002406) ENSGEVG00005002149 SCUBE3 (ENSGEVG00005001903) ENSGEVG00005001777 ZNF76 (ENSGEVG00005001748) DEF6 (ENSGEVG00005001726) PPARD (ENSGEVG00005001704) ENSGEVG00005001677 ##22 FANCE (ENSGEVG00005001655) ENSGEVG00005001625 MICAL1 (ENSGEVG00005001597) SMPD2 (ENSGEVG00005001556) TEAD3 (ENSGEVG00005001512) TULP1 (ENSGEVG00005001442) FKBP5 (ENSGEVG00005001393) ENSGEVG00005001377 ARMC12 (ENSGEVG00005001362) CLPS (ENSGEVG00005001342) LHFPL5 (ENSGEVG00005001336) SRPK1 (ENSGEVG00005001288) SLC26A8 (ENSGEVG00005001226) MAPK14 (ENSGEVG00005001172) MAPK13 (ENSGEVG00005001082) Mammalia ANCESTRAL SPECIES 41 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000159117 ENSGT00950000185408 ENSGT00390000009166 ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 Theria ANCESTRAL SPECIES 4 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228 ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a ENSGT00390000008767.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000160828 Eutheria ANCESTRAL SPECIES 9 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00390000008767.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Boreoeutheria ANCESTRAL SPECIES 7 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00730000110997.k.a ENSGT00900000143577 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Laurasiatheria ANCESTRAL SPECIES 7 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00900000143577 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00990000203541.a.a.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00900000143577 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Carnivora ANCESTRAL SPECIES 4 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Caniformia ANCESTRAL SPECIES 3 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000160828 Caniformia_b ANCESTRAL SPECIES 6 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000160828 Ursidae ANCESTRAL SPECIES 37 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000160828 Ursus ANCESTRAL SPECIES 53 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.k.a ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000160828 American black bear MODERN SPECIES 1779 SCUBE3 (ENSUAMG00000013976) ZNF76 (ENSUAMG00000014218) DEF6 (ENSUAMG00000014219) PPARD (ENSUAMG00000014221) ENSUAMG00000014222 ##22 ENSUAMG00000014223 ENSUAMG00000014225 RPL10A (ENSUAMG00000014226) TEAD3 (ENSUAMG00000014229) Polar bear MODERN SPECIES 184 HMGA1 (ENSUMAG00000010910) ENSUMAG00000010909 NUDT3 (ENSUMAG00000010905) RPS10 (ENSUMAG00000010901) PACSIN1 (ENSUMAG00000010881) ILRUN (ENSUMAG00000010872) SNRPC (ENSUMAG00000010869) BLTP3A (ENSUMAG00000010824) TAF11 (ENSUMAG00000010818) ANKS1A (ENSUMAG00000010559) TCP11 (ENSUMAG00000010533) SCUBE3 (ENSUMAG00000010513) ZNF76 (ENSUMAG00000010449) DEF6 (ENSUMAG00000010421) PPARD (ENSUMAG00000010402) ENSUMAG00000010392 ##22 FANCE (ENSUMAG00000010380) RPL10A (ENSUMAG00000010363) TEAD3 (ENSUMAG00000010306) TULP1 (ENSUMAG00000010287) FKBP5 (ENSUMAG00000010276) ARMC12 (ENSUMAG00000010266) CLPSL2 (ENSUMAG00000010262) CLPS (ENSUMAG00000010261) LHFPL5 (ENSUMAG00000010256) SRPK1 (ENSUMAG00000010252) ENSUMAG00000010249 SLC26A8 (ENSUMAG00000010207) MAPK14 (ENSUMAG00000010189) MAPK13 (ENSUMAG00000010150) BRPF3 (ENSUMAG00000010031) Laurasiatheria_c ANCESTRAL SPECIES 6 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.q.a.a.a ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Equus ANCESTRAL SPECIES 10 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.q.a.a.a ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Horse MODERN SPECIES 12 RPS10 (ENSECAG00000006430) PACSIN1 (ENSECAG00000013077) SPDEF (ENSECAG00000021717) ILRUN (ENSECAG00000000406) ENSECAG00000053290 ENSECAG00000055666 SNRPC (ENSECAG00000026848) BLTP3A (ENSECAG00000009741) TAF11 (ENSECAG00000016725) ANKS1A (ENSECAG00000019918) TCP11 (ENSECAG00000012071) SCUBE3 (ENSECAG00000015613) ZNF76 (ENSECAG00000014843) DEF6 (ENSECAG00000022088) PPARD (ENSECAG00000008227) ENSECAG00000043329 ##22 FANCE (ENSECAG00000013190) RPL10A (ENSECAG00000014090) TULP1 (ENSECAG00000007517) FKBP5 (ENSECAG00000011304) ENSECAG00000053155 ARMC12 (ENSECAG00000011493) CLPSL2 (ENSECAG00000043440) CLPS (ENSECAG00000012160) LHFPL5 (ENSECAG00000014034) SRPK1 (ENSECAG00000014213) SLC26A8 (ENSECAG00000000493) MAPK14 (ENSECAG00000014175) MAPK13 (ENSECAG00000030024) BRPF3 (ENSECAG00000005945) PNPLA1 (ENSECAG00000012343) Donkey MODERN SPECIES 28 ENSEASG00005020963 NUDT3 (ENSEASG00005020969) ENSEASG00005020975 PACSIN1 (ENSEASG00005020986) SPDEF (ENSEASG00005020995) ILRUN (ENSEASG00005021001) SNRPC (ENSEASG00005021007) BLTP3A (ENSEASG00005021010) TAF11 (ENSEASG00005024329) ANKS1A (ENSEASG00005021060) TCP11 (ENSEASG00005032490) SCUBE3 (ENSEASG00005021138) ZNF76 (ENSEASG00005021182) DEF6 (ENSEASG00005021188) PPARD (ENSEASG00005021192) ENSEASG00005031872 ##22 FANCE (ENSEASG00005021199) ENSEASG00005021203 RPL10A (ENSEASG00005021204) TEAD3 (ENSEASG00005021216) TULP1 (ENSEASG00005021232) FKBP5 (ENSEASG00005021242) ARMC12 (ENSEASG00005021247) CLPSL2 (ENSEASG00005035770) ENSEASG00005021252 CLPS (ENSEASG00005038646) LHFPL5 (ENSEASG00005021258) SRPK1 (ENSEASG00005021262) SLC26A8 (ENSEASG00005021272) MAPK14 (ENSEASG00005021290) MAPK13 (ENSEASG00005028422) Chiroptera ANCESTRAL SPECIES ENSGT00950000183077.b ##22 Microchiroptera ANCESTRAL SPECIES 4 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000160828 Microbat MODERN SPECIES 1284 SCUBE3 (ENSMLUG00000008561) ZNF76 (ENSMLUG00000008610) DEF6 (ENSMLUG00000008624) PPARD (ENSMLUG00000010594) ENSMLUG00000023455 ##22 ENSMLUG00000024807 FKBP5 (ENSMLUG00000011255) ARMC12 (ENSMLUG00000005100) ENSMLUG00000022424 ENSMLUG00000010934 CLPS (ENSMLUG00000010948) LHFPL5 (ENSMLUG00000010960) SRPK1 (ENSMLUG00000010974) SLC26A8 (ENSMLUG00000003668) MAPK14 (ENSMLUG00000005967) ENSMLUG00000024504 BRPF3 (ENSMLUG00000002418) PNPLA1 (ENSMLUG00000000853) BNIP5 (ENSMLUG00000000855) ENSMLUG00000000866 Artiodactyla ANCESTRAL SPECIES 15 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00900000143577 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Artiodactyla_a ANCESTRAL SPECIES 19 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Artiodactyla_b ANCESTRAL SPECIES 15 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415.b ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00510000046986.x.b.a ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 Pecora ANCESTRAL SPECIES 21 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415.b ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b.f ENSGT00950000182956.b.b.b ENSGT00510000046986.x.b.a ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Percora_a ANCESTRAL SPECIES 12 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415.b ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b.f ENSGT00950000182956.b.b.b ENSGT00510000046986.x.b.a ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Bovidae ANCESTRAL SPECIES 13 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415.b ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b.f ENSGT00950000182956.b.b.b ENSGT00510000046986.x.b.a ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Bovinae ANCESTRAL SPECIES 9 ENSGT00940000157882 ENSGT00390000011010.b.s.b ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415.b ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b.f ENSGT00950000182956.b.b.b ENSGT00510000046986.x.b.a ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT00940000157353.qb.a ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 Bos ANCESTRAL SPECIES 17 ENSGT00940000157882 ENSGT00390000011010.b.s.b ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415.b ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b.f ENSGT00950000182956.b.b.b ENSGT00510000046986.x.b.a ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT00940000157353.qb.a ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 Bos_b ANCESTRAL SPECIES 8 ENSGT00940000157882 ENSGT00390000011010.b.s.b ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415.b ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b.f ENSGT00950000182956.b.b.b ENSGT00510000046986.x.b.a ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT00940000157353.qb.a ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 Hybrid Bos Indicus MODERN SPECIES 15 RPS10 (ENSBIXG00005012752) PACSIN1 (ENSBIXG00005012624) SPDEF (ENSBIXG00005012540) ILRUN (ENSBIXG00005000336) SNRPC (ENSBIXG00005012449) BLTP3A (ENSBIXG00005012397) ENSBIXG00005012377 TAF11 (ENSBIXG00005000356) ANKS1A (ENSBIXG00005001303) TCP11 (ENSBIXG00005012284) SCUBE3 (ENSBIXG00005012176) ZNF76 (ENSBIXG00005012070) DEF6 (ENSBIXG00005011997) ENSBIXG00005011966 PPARD (ENSBIXG00005001212) ENSBIXG00005011861 ##22 FANCE (ENSBIXG00005011844) RPL10A (ENSBIXG00005011822) TEAD3 (ENSBIXG00005011795) ENSBIXG00005001162 TULP1 (ENSBIXG00005011734) FKBP5 (ENSBIXG00005011681) ARMC12 (ENSBIXG00005011622) CLPSL2 (ENSBIXG00005005817) CLPS (ENSBIXG00005011581) LHFPL5 (ENSBIXG00005001127) SRPK1 (ENSBIXG00005011520) ENSBIXG00005011420 SLC26A8 (ENSBIXG00005011403) ENSBIXG00005011388 MAPK14 (ENSBIXG00005011345) Bos_a ANCESTRAL SPECIES 11 ENSGT00730000111329 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415.b ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b.f ENSGT00950000182956.b.b.b ENSGT00510000046986.x.b.a ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Domestic yak MODERN SPECIES 16 NUDT3 (ENSBGRG00000020713) RPS10 (ENSBGRG00000020664) PACSIN1 (ENSBGRG00000020626) SPDEF (ENSBGRG00000020519) ILRUN (ENSBGRG00000020387) ENSBGRG00000020027 ENSBGRG00000019994 BLTP3A (ENSBGRG00000019214) TAF11 (ENSBGRG00000018993) ANKS1A (ENSBGRG00000017530) TCP11 (ENSBGRG00000017298) SCUBE3 (ENSBGRG00000017185) ZNF76 (ENSBGRG00000017002) DEF6 (ENSBGRG00000016931) PPARD (ENSBGRG00000016651) ENSBGRG00000016542 ##22 FANCE (ENSBGRG00000016287) RPL10A (ENSBGRG00000016190) ENSBGRG00000016171 TEAD3 (ENSBGRG00000015934) TULP1 (ENSBGRG00000015148) FKBP5 (ENSBGRG00000014981) ARMC12 (ENSBGRG00000014897) CLPSL2 (ENSBGRG00000014848) CLPS (ENSBGRG00000014811) LHFPL5 (ENSBGRG00000014762) ENSBGRG00000014743 SRPK1 (ENSBGRG00000014285) SLC26A8 (ENSBGRG00000013741) MAPK13 (ENSBGRG00000012243) BRPF3 (ENSBGRG00000011913) Euarchontoglires ANCESTRAL SPECIES 7 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00730000110997.k.a ENSGT00900000143577 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Euarchontoglires_A ANCESTRAL SPECIES 6 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00440000034918.q.b.b ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Glires ANCESTRAL SPECIES 5 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00440000034918.q.b.b ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Rodentia ANCESTRAL SPECIES 6 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00440000034918.q.b.b ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Rodentia_A ANCESTRAL SPECIES 8 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00440000034918.q.b.b ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.k.a.c.a ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Hystricomorpha ANCESTRAL SPECIES 1 ENSGT00940000157882 ENSGT00440000034918.q.b.b ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.k.a.c.a ENSGT00730000110997.k.a.c.b.a ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584.f ENSGT00940000155056 ENSGT00940000160828 Naked mole-rat female MODERN SPECIES 4 NUDT3 (ENSHGLG00000019328) RPS10 (ENSHGLG00000019210) PACSIN1 (ENSHGLG00000034230) SPDEF (ENSHGLG00000016872) ENSHGLG00000019438 ENSHGLG00000035791 SNRPC (ENSHGLG00000050686) BLTP3A (ENSHGLG00000013152) ENSHGLG00000016220 ANKS1A (ENSHGLG00000016179) TCP11 (ENSHGLG00000015933) SCUBE3 (ENSHGLG00000013799) ZNF76 (ENSHGLG00000013342) DEF6 (ENSHGLG00000012785) ENSHGLG00000012625 ENSHGLG00000029161 ##22 FANCE (ENSHGLG00000012417) RPL10A (ENSHGLG00000012269) TEAD3 (ENSHGLG00000012119) TULP1 (ENSHGLG00000011964) FKBP5 (ENSHGLG00000011702) ARMC12 (ENSHGLG00000011370) CLPSL2 (ENSHGLG00000011202) CLPS (ENSHGLG00000010953) LHFPL5 (ENSHGLG00000010688) Srpk1 (ENSHGLG00000010559) ENSHGLG00000015890 MAPK14 (ENSHGLG00000015825) MAPK13 (ENSHGLG00000015728) BRPF3 (ENSHGLG00000015657) PNPLA1 (ENSHGLG00000015567) Primates ANCESTRAL SPECIES 5 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00900000143577 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Strepsirrhini ANCESTRAL SPECIES 7 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Bushbaby MODERN SPECIES 146 ENSOGAG00000001365 ENSOGAG00000027856 PACSIN1 (ENSOGAG00000029242) SPDEF (ENSOGAG00000011260) ILRUN (ENSOGAG00000011264) ENSOGAG00000008755 BLTP3A (ENSOGAG00000016353) TAF11 (ENSOGAG00000008522) ANKS1A (ENSOGAG00000008526) ENSOGAG00000028462 TCP11 (ENSOGAG00000031615) SCUBE3 (ENSOGAG00000002933) ZNF76 (ENSOGAG00000002935) DEF6 (ENSOGAG00000002936) PPARD (ENSOGAG00000000630) ENSOGAG00000024631 ##22 FANCE (ENSOGAG00000002939) TEAD3 (ENSOGAG00000002943) TULP1 (ENSOGAG00000029633) FKBP5 (ENSOGAG00000016164) ENSOGAG00000032836 ARMC12 (ENSOGAG00000025864) CLPSL2 (ENSOGAG00000006388) ENSOGAG00000009050 ENSOGAG00000024915 CLPS (ENSOGAG00000009742) LHFPL5 (ENSOGAG00000009744) SRPK1 (ENSOGAG00000009745) SLC26A8 (ENSOGAG00000002813) MAPK14 (ENSOGAG00000002814) MAPK13 (ENSOGAG00000002816) Haplorrhini ANCESTRAL SPECIES 2 ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00900000143577 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Simiiformes ANCESTRAL SPECIES 5 ENSGT00940000157882 ENSGT00440000034918.r.i ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00900000143577 ENSGT00490000043415 ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000154045.a.j ENSGT00940000159584 Platyrrhini ANCESTRAL SPECIES 2 ENSGT00940000157882 ENSGT00440000034918.r.h.b ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00900000143577 ENSGT00490000043415.c ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000154045.a.j ENSGT00940000159584 Cebidae ANCESTRAL SPECIES 5 ENSGT00940000157882 ENSGT00440000034918.r.h.b ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00900000143577 ENSGT00490000043415.c ENSGT00730000110997.l ENSGT00600000084428.a ENSGT00390000013228.e.a ENSGT00940000155806 ENSGT00940000161869 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.a.a.a.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000011494 ENSGT00510000049845 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 Marmoset MODERN SPECIES 16 ENSCJAG00000078363 SPDEF (ENSCJAG00000015294) ILRUN (ENSCJAG00000015304) ENSCJAG00000015321 ENSCJAG00000083830 BLTP3A (ENSCJAG00000015333) TAF11 (ENSCJAG00000015388) ANKS1A (ENSCJAG00000034880) TCP11 (ENSCJAG00000015429) SCUBE3 (ENSCJAG00000015443) ENSCJAG00000082425 ENSCJAG00000015519 PPARD (ENSCJAG00000015604) ENSCJAG00000066888 ENSCJAG00000082871 ENSCJAG00000075491 ##22 FANCE (ENSCJAG00000015623) ENSCJAG00000042194 TEAD3 (ENSCJAG00000015661) TULP1 (ENSCJAG00000015713) FKBP5 (ENSCJAG00000015725) ARMC12 (ENSCJAG00000015745) ENSCJAG00000015754 CLPSL1 (ENSCJAG00000015756) CLPS (ENSCJAG00000015758) LHFPL5 (ENSCJAG00000060773) SRPK1 (ENSCJAG00000015768) SLC26A8 (ENSCJAG00000015817) ENSCJAG00000074841 MAPK14 (ENSCJAG00000041232) MAPK13 (ENSCJAG00000015899) Marsupialia ANCESTRAL SPECIES 2 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228.d.a.b ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000160828 ENSGT00390000001176 Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228.d.a.b ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000160828 ENSGT00390000001176 Diprotodontia ANCESTRAL SPECIES 44 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228.c ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.b ENSGT00950000182956.b.b.b ENSGT00940000158771 ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000160828 ENSGT00390000001176 Diprotodontia_a ANCESTRAL SPECIES 49 ENSGT00410000025882.b ENSGT00940000157882 ENSGT00440000034918.r ENSGT00950000182973.a.c.a ENSGT00940000157549 ENSGT00490000043415 ENSGT00730000110997 ENSGT00600000084428.a ENSGT00390000013228.c ENSGT00940000155806 ENSGT00940000160792 ENSGT00940000153185.a.a.b ENSGT00940000160911 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767.b ENSGT00950000182956.b.b.b ENSGT00940000158726 ENSGT00390000003856 ENSGT00390000012644 ENSGT00990000203541.a.a.b ENSGT00940000155264 ENSGT01100000263544.c.a.b.a ENSGT00940000155325 ENSGT00940000159584 ENSGT00940000155056 ENSGT00940000160828 ENSGT00390000001176 ENSGT00940000162211 koala MODERN SPECIES 76 NUDT3 (ENSPCIG00000034631) ENSPCIG00000026597 PACSIN1 (ENSPCIG00000006379) SPDEF (ENSPCIG00000006374) ILRUN (ENSPCIG00000006371) SNRPC (ENSPCIG00000033609) BLTP3A (ENSPCIG00000006367) ENSPCIG00000006365 ANKS1A (ENSPCIG00000006345) ENSPCIG00000006331 ENSPCIG00000012637 SCUBE3 (ENSPCIG00000003800) ZNF76 (ENSPCIG00000021233) DEF6 (ENSPCIG00000021237) PPARD (ENSPCIG00000021240) ENSPCIG00000021244 ##22 ENSPCIG00000021248 ENSPCIG00000021251 TEAD3 (ENSPCIG00000021255) FKBP5 (ENSPCIG00000021261) ARMC12 (ENSPCIG00000030892) CLPS (ENSPCIG00000021270) LHFPL5 (ENSPCIG00000021272) SRPK1 (ENSPCIG00000021278) ENSPCIG00000021291 MAPK14 (ENSPCIG00000021301) MAPK13 (ENSPCIG00000021308) ENSPCIG00000021314 ENSPCIG00000032311 ENSPCIG00000021319 ENSPCIG00000021323 Common wonbat MODERN SPECIES 1047 SMIM29 (ENSVURG00010016385) NUDT3 (ENSVURG00010016394) ENSVURG00010016405 PACSIN1 (ENSVURG00010016428) SPDEF (ENSVURG00010016586) ILRUN (ENSVURG00010016604) SNRPC (ENSVURG00010016613) BLTP3A (ENSVURG00010016640) ANKS1A (ENSVURG00010016789) ENSVURG00010018877 ENSVURG00010018884 ENSVURG00010018893 ZNF76 (ENSVURG00010018901) DEF6 (ENSVURG00010018912) PPARD (ENSVURG00010018918) ENSVURG00010018922 ##22 ENSVURG00010018929 RPL10A (ENSVURG00010018942) TEAD3 (ENSVURG00010018988) ENSVURG00010019006 FKBP5 (ENSVURG00010019051) CLPS (ENSVURG00010019069) LHFPL5 (ENSVURG00010019075) SRPK1 (ENSVURG00010019087) SLC26A8 (ENSVURG00010019133) MAPK14 (ENSVURG00010019236) MAPK13 (ENSVURG00010019265) BRPF3 (ENSVURG00010019287) PNPLA1 (ENSVURG00010019313) ENSVURG00010019331 ETV7 (ENSVURG00010019335) Opossum MODERN SPECIES 1 NUDT3 (ENSMODG00000048086) RPS10 (ENSMODG00000013929) ENSMODG00000049383 SPDEF (ENSMODG00000013916) ILRUN (ENSMODG00000013910) ENSMODG00000013904 BLTP3A (ENSMODG00000013895) TAF11 (ENSMODG00000051190) ANKS1A (ENSMODG00000013855) ENSMODG00000013839 ENSMODG00000027808 SCUBE3 (ENSMODG00000013831) ZNF76 (ENSMODG00000013806) DEF6 (ENSMODG00000013789) PPARD (ENSMODG00000013778) ENSMODG00000050582 ##22 ENSMODG00000013771 ENSMODG00000013766 TEAD3 (ENSMODG00000013762) TULP1 (ENSMODG00000013758) FKBP5 (ENSMODG00000013757) ARMC12 (ENSMODG00000013752) CLPS (ENSMODG00000013747) ENSMODG00000046296 ENSMODG00000028226 LHFPL5 (ENSMODG00000013743) SRPK1 (ENSMODG00000013740) ENSMODG00000013715 MAPK14 (ENSMODG00000013704) MAPK13 (ENSMODG00000013669) BRPF3 (ENSMODG00000013652) Anura ANCESTRAL SPECIES 379 ENSGT00940000155806 ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 Frog MODERN SPECIES 2 brpf3 (ENSXETG00000033963) ENSXETG00000041926 ENSXETG00000042577 mapk13 (ENSXETG00000031922) cntn2 (ENSXETG00000015325) nfasc (ENSXETG00000004390) ENSXETG00000042035 dennd2d (ENSXETG00000004388) cept1 (ENSXETG00000004387) ENSXETG00000043995 anks1a (ENSXETG00000015109) ENSXETG00000047433 def6 (ENSXETG00000048907) ENSXETG00000048797 ppard (ENSXETG00000015121) mkrn3 (ENSXETG00000015127) ##22 fance (ENSXETG00000039261) rps10 (ENSXETG00000015129) cacna1s (ENSXETG00000015130) ENSXETG00000046130 pkp1 (ENSXETG00000017085) tnnt2 (ENSXETG00000017086) tnni1 (ENSXETG00000017087) lad1 (ENSXETG00000033210) csrp1 (ENSXETG00000017088) nav1 (ENSXETG00000017089) ENSXETG00000017094 ppp1r12b (ENSXETG00000017095) celsr2 (ENSXETG00000025040) ppil1 (ENSXETG00000046800) cpne9 (ENSXETG00000017098) Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000008928 ENSLLEG00000008905 ENSLLEG00000008772 ENSLLEG00000008748 ENSLLEG00000008727 ENSLLEG00000008705 LHX1 (ENSLLEG00000008549) ENSLLEG00000008518 AATF (ENSLLEG00000008387) ENSLLEG00000008349 ACACA (ENSLLEG00000006637) TADA2A (ENSLLEG00000005682) ENSLLEG00000005567 SYNRG (ENSLLEG00000005219) PPARD (ENSLLEG00000005112) ENSLLEG00000005065 ##22 ENSLLEG00000005042 ENSLLEG00000004996 SNRPE (ENSLLEG00000004964) ENSLLEG00000004941 ENSLLEG00000004906 SOX13 (ENSLLEG00000004859) ENSLLEG00000004845 ENSLLEG00000004838 ENSLLEG00000004834 ETNK2 (ENSLLEG00000004821) REN (ENSLLEG00000004745) ENSLLEG00000004708 ENSLLEG00000004694 GOLT1A (ENSLLEG00000004687) PLEKHA6 (ENSLLEG00000004633) Coelacanth MODERN SPECIES 248 tuba5 (ENSLACG00000012222) IPO9 (ENSLACG00000012842) SHISA4 (ENSLACG00000013077) ENSLACG00000013243 ENSLACG00000013313 ENSLACG00000013724 SNRPC (ENSLACG00000013753) BLTP3A (ENSLACG00000013817) taf11 (ENSLACG00000014066) ANKS1A (ENSLACG00000014247) ENSLACG00000014744 SCUBE3 (ENSLACG00000014997) ZNF76 (ENSLACG00000015486) DEF6 (ENSLACG00000015594) PPARD (ENSLACG00000015749) mkrn4 (ENSLACG00000015839) ##22 FANCE (ENSLACG00000022320) rpl10a (ENSLACG00000015995) ENSLACG00000016259 smpd2a (ENSLACG00000016351) TEAD3 (ENSLACG00000016444) ENSLACG00000016673 FKBP5 (ENSLACG00000016751) ILRUN (ENSLACG00000016868) SPDEF (ENSLACG00000017022) PACSIN1 (ENSLACG00000017058) RPS10 (ENSLACG00000017219) ELAPOR1 (ENSLACG00000017265) CELSR2 (ENSLACG00000017360) ENSLACG00000022243 TMEM9 (ENSLACG00000017539) Actinopterygii ANCESTRAL SPECIES 40 ENSGT01030000234578.B.b ENSGT00390000000062 ENSGT00940000165883 ENSGT00950000182931.A ENSGT00950000183117.a.b ENSGT00940000153544.a ENSGT00390000007975.b ENSGT00940000163908 ENSGT00390000000020.a ENSGT00940000161251 ENSGT00940000158289.b ENSGT00940000163864 ENSGT00390000000819.b ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000159117 ENSGT00940000177211 Reedfish MODERN SPECIES 11 ENSECRG00000003925 ENSECRG00000003919 ENSECRG00000003865 dennd2db (ENSECRG00000003817) dram2b (ENSECRG00000003790) sycp3 (ENSECRG00000003786) cept1b (ENSECRG00000003769) stk38a (ENSECRG00000003748) MTCH1 (ENSECRG00000003730) ENSECRG00000003708 cacna1sb (ENSECRG00000003689) ASCL5 (ENSECRG00000003673) tmem9 (ENSECRG00000003668) def6a (ENSECRG00000003663) ppardb (ENSECRG00000003652) mkrn4 (ENSECRG00000003642) ##22 fance (ENSECRG00000003630) rpl10a (ENSECRG00000003619) mical1 (ENSECRG00000003592) ENSECRG00000003572 ZNF76 (ENSECRG00000003561) scube3 (ENSECRG00000003455) ENSECRG00000003404 ENSECRG00000003394 ANKS1A (ENSECRG00000003332) taf11 (ENSECRG00000003290) ENSECRG00000003278 ENSECRG00000003258 snrpc (ENSECRG00000003247) ilrun (ENSECRG00000003230) SPDEF (ENSECRG00000003212) Neopterygii ANCESTRAL SPECIES 202 ENSGT01030000234578.B.b ENSGT00390000000062 ENSGT00940000165883 ENSGT00950000182931.A ENSGT00950000183117.a.b ENSGT00940000153544.a.i.a ENSGT00390000007975.b ENSGT00940000163908 ENSGT00390000000020.a ENSGT00940000161251 ENSGT00940000158289.b ENSGT00940000163864 ENSGT00390000000819.b ENSGT00950000183017.b.b.a.b ENSGT00940000156676 ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000159117 ENSGT00940000177211 Spotted gar MODERN SPECIES 2 mkrn4 (ENSLOCG00000000455) ##22 fance (ENSLOCG00000000495) rpl10a (ENSLOCG00000000533) ENSLOCG00000000568 Osteoglossocephalai ANCESTRAL SPECIES 262 ENSGT00940000158289.a.b ENSGT00390000000819.b ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00390000011228.a.b ENSGT00940000162196 ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.b.a ENSGT00940000155264 ENSGT00990000203541.a.a.b.h ENSGT00940000159650 ENSGT00940000156194.m.b Osteoglossiformes ANCESTRAL SPECIES 160 ENSGT00390000013899.a.b ENSGT00940000165883 ENSGT00950000182931.A.b ENSGT01030000234578.B.b.b ENSGT00950000183117.a.b.a.b ENSGT00950000182931.A.a.a ENSGT01030000234578.B.b.a ENSGT00950000183117.a.b.a.a ENSGT00940000153544.a.i.b ENSGT00390000007975.b ENSGT00940000161251 ENSGT00940000158289.a.b ENSGT00390000000819.b ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.c ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00940000162196 ENSGT00940000155325.a.a.a.a.b ENSGT00940000155325.a.b.a ENSGT00940000155264 ENSGT00990000203541.a.a.b.h ENSGT00940000159650 ENSGT00940000156194.m.b ENSGT01030000234555.a.a.b.a.a.a.b Asian bonytongue MODERN SPECIES 11 ENSSFOG00015032560 mical1 (ENSSFOG00015012228) camk1gb (ENSSFOG00015012165) G0S2 (ENSSFOG00015026257) DENND2D (ENSSFOG00015022308) ENSSFOG00015022324 CEPT1 (ENSSFOG00015022330) stk38a (ENSSFOG00015033337) ENSSFOG00015022356 ENSSFOG00015022365 FGD2 (ENSSFOG00015022370) cacna1sb (ENSSFOG00015022398) tmem9 (ENSSFOG00015022443) def6a (ENSSFOG00015022459) PPARD (ENSSFOG00015024815) mkrn4 (ENSSFOG00015024848) ##22 fance (ENSSFOG00015032525) rpl10a (ENSSFOG00015022494) ENSSFOG00015022512 ENSSFOG00015027320 ELAPOR1 (ENSSFOG00015021350) ENSSFOG00015021413 ENSSFOG00015031936 ENSSFOG00015021430 ENSSFOG00015013305 HSPA2 (ENSSFOG00015027464) tmem167b (ENSSFOG00015007434) zgc:195245 (ENSSFOG00015007448) ENSSFOG00015027285 ENSSFOG00015027319 cpne5a (ENSSFOG00015023325) P. kingsleyae MODERN SPECIES 48 zgc:153675 (ENSPKIG00000015601) ENSPKIG00000015631 ENSPKIG00000015708 ENSPKIG00000015720 dennd2db (ENSPKIG00000015755) ENSPKIG00000015807 CEPT1 (ENSPKIG00000015851) stk38a (ENSPKIG00000015933) ENSPKIG00000015969 FGD2 (ENSPKIG00000016001) ENSPKIG00000016093 ENSPKIG00000016104 cacna1sb (ENSPKIG00000016131) def6a (ENSPKIG00000016211) PPARD (ENSPKIG00000016280) mkrn4 (ENSPKIG00000016323) ##22 fance (ENSPKIG00000016341) rpl10a (ENSPKIG00000016374) ENSPKIG00000016410 ENSPKIG00000016424 ENSPKIG00000016440 zgc:195245 (ENSPKIG00000016461) tmem167b (ENSPKIG00000016477) Clupeocephala ANCESTRAL SPECIES 119 ENSGT00940000158289.a.b.b ENSGT00390000000819.b ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00530000063722.a ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00940000173571 ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00390000012644 ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a Otomorpha ANCESTRAL SPECIES 171 ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00390000012644 ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Otophysi ANCESTRAL SPECIES 65 ENSGT00940000157106.g ENSGT00940000157007.i.a ENSGT00940000157261.k.b ENSGT00550000074865 ENSGT00940000170563 ENSGT00940000165387.a ENSGT00950000182844.a.a.b ENSGT00940000154468.tb.b.b ENSGT00390000015805.b ENSGT00940000157898 ENSGT00940000154471.a.a ENSGT00940000164911 ENSGT00940000159173 ENSGT00940000161209 ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00390000012644 ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000165930.B ENSGT00940000157415 Cyprinoidei ANCESTRAL SPECIES 7 ENSGT00940000166425 ENSGT00490000043329.a.a.a.vb.b ENSGT00980000199713 ENSGT00940000166825 ENSGT00940000160063.g.a ENSGT00890000139436.A.b.a ENSGT00940000165955.a ENSGT00940000165056.a ENSGT00730000110895.b.b.c ENSGT00940000166636 ENSGT00390000003809 ENSGT00940000164911 ENSGT00940000159173 ENSGT00940000161209 ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000165930.B ENSGT00940000157415 ENSGT00940000158508 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 37 ENSGT00390000009113.d.c ENSGT00940000161218.i.a ENSGT00940000165632.a ENSGT00940000166425.a ENSGT00490000043329.a.a.a.vb.b.b ENSGT00890000139436.A.b.a.b ENSGT00940000165955.a.a ENSGT00940000165056.a.a ENSGT00730000110895.b.b.c.a ENSGT00940000166636.d ENSGT00390000003809.e ENSGT00940000164911.j ENSGT00940000159173.f ENSGT00940000161209.c ENSGT00940000156676.d.b ENSGT00950000183077.b.a ##22 ENSGT00390000000705.b ENSGT00390000008767.q ENSGT00940000154102.a.g.a.b ENSGT00390000011228.a.a.a ENSGT01030000234625.A.c.b ENSGT00940000156861.b ENSGT00940000155325.a.a.b.b ENSGT00940000166975.h ENSGT00990000203541.a.a.b.g.d ENSGT00940000156194.m.a.a ENSGT00940000158175.a ENSGT01030000234555.a.a.b.a.a.a.a.a ENSGT00940000165930.B.s ENSGT00940000157415.g ENSGT00940000158508.i Cyprininae_a ANCESTRAL SPECIES 39 ENSGT00390000009113.d.c ENSGT00940000161218.i.a ENSGT00940000165632.a ENSGT00940000166425.a ENSGT00490000043329.a.a.a.vb.b.b ENSGT00890000139436.A.b.a.b ENSGT00940000165955.a.a ENSGT00940000165056.a.a ENSGT00730000110895.b.b.c.a ENSGT00940000166636.d ENSGT00390000003809.e ENSGT00940000164911.j ENSGT00940000159173.f ENSGT00940000161209.c ENSGT00940000156676.d.b ENSGT00950000183077.b.a ##22 ENSGT00390000000705.b ENSGT00390000008767.q ENSGT00940000154102.a.g.a.b ENSGT00390000011228.a.a.a ENSGT00940000156861.b ENSGT00940000155325.a.a.b.b ENSGT00940000166975.h ENSGT00990000203541.a.a.b.g.d ENSGT00940000156194.m.a.a ENSGT00940000158175.a ENSGT01030000234555.a.a.b.a.a.a.a.a ENSGT00940000165930.B.s ENSGT00940000157415.g ENSGT00940000158508.i ENSGT00940000166935.b Common carp reference MODERN SPECIES 17 ENSCCRG00000000695 dnmt3ba (ENSCCRG00000008779) mapre1a (ENSCCRG00000008742) ENSCCRG00000041189 suv39h1a (ENSCCRG00000014181) gpr173 (ENSCCRG00000082903) ENSCCRG00000014166 sema3gb (ENSCCRG00000014199) wasb (ENSCCRG00000005377) slc38a5b (ENSCCRG00000002161) ccdc22 (ENSCCRG00000002130) nt5dc2 (ENSCCRG00000050032) tbc1d25 (ENSCCRG00000050086) ENSCCRG00000050094 ppardb (ENSCCRG00000050977) mkrn4 (ENSCCRG00000050163) ##22 rpl10a (ENSCCRG00000057255) ENSCCRG00000050980 ENSCCRG00000050235 ENSCCRG00000056041 ENSCCRG00000050911 srpk1a (ENSCCRG00000050970) lhfpl5b (ENSCCRG00000001353) cpne5a (ENSCCRG00000010993) dclre1b (ENSCCRG00000017101) adora1b (ENSCCRG00000057125) zgc:110353 (ENSCCRG00000027790) mmp9 (ENSCCRG00000025804) ENSCCRG00000077083 prok1 (ENSCCRG00000036795) lamtor5 (ENSCCRG00000010391) Golden-line barbel MODERN SPECIES 145 nt5dc2 (ENSSGRG00000038037) tbc1d25 (ENSSGRG00000038036) ENSSGRG00000038035 ppardb (ENSSGRG00000038033) mkrn4 (ENSSGRG00000038032) ##22 fance (ENSSGRG00000038030) ENSSGRG00000038027 zgc:195245 (ENSSGRG00000038024) ELAPOR1 (ENSSGRG00000037713) MAPK14 (ENSSGRG00000034544) srpk1a (ENSSGRG00000034025) lhfpl5b (ENSSGRG00000034009) cpne5a (ENSSGRG00000034007) adora1b (ENSSGRG00000034004) zgc:110353 (ENSSGRG00000034003) mmp9 (ENSSGRG00000033699) ZNF335 (ENSSGRG00000033687) prok1 (ENSSGRG00000033684) RBM15 (ENSSGRG00000033678) ENSSGRG00000033677 Goldfish MODERN SPECIES 873 ppdpfa (ENSCARG00000065234) PTK6 (ENSCARG00000065241) ENSCARG00000065251 dnmt3ba (ENSCARG00000065289) mapre1a (ENSCARG00000065487) gpr173 (ENSCARG00000065512) ENSCARG00000065517 sema3gb (ENSCARG00000065529) wasb (ENSCARG00000065567) slc38a5b (ENSCARG00000065580) ccdc22 (ENSCARG00000065617) nt5dc2 (ENSCARG00000065692) tbc1d25 (ENSCARG00000065776) ENSCARG00000065790 ppardb (ENSCARG00000065852) mkrn4 (ENSCARG00000065925) ##22 rpl10a (ENSCARG00000065941) ENSCARG00000065988 zgc:195245 (ENSCARG00000065994) si:ch211-163l21.7 (ENSCARG00000066008) ELAPOR1 (ENSCARG00000066029) mapk14a (ENSCARG00000066190) srpk1a (ENSCARG00000066292) lhfpl5b (ENSCARG00000067237) cpne5a (ENSCARG00000067251) Cyprininae ANCESTRAL SPECIES 6 ENSGT00940000166425.b ENSGT00490000043329.a.a.a.vb.b.a ENSGT00980000199713 ENSGT00940000166825 ENSGT00940000160063.g.a ENSGT00890000139436.A.b.a.a ENSGT00940000165955.a.b ENSGT00940000165056.a.b ENSGT00730000110895.b.b.c.b ENSGT00940000166636.c ENSGT00390000003809.f ENSGT00940000164911.i ENSGT00940000159173.e ENSGT00940000161209.d ENSGT00940000156676.d.a ENSGT00950000183077.b.b ##22 ENSGT00390000000705.a ENSGT00390000008767.r ENSGT00940000154102.a.g.a.a ENSGT00390000011228.a.a.b ENSGT01030000234625.A.c.a ENSGT00940000156861.a ENSGT00940000154427.A.e ENSGT00940000155325.a.a.b.a ENSGT00940000166975.g ENSGT00990000203541.a.a.b.g.c Cyprininae_a ANCESTRAL SPECIES 190 ENSGT00940000166425.b ENSGT00490000043329.a.a.a.vb.b.a ENSGT00980000199713 ENSGT00940000166825 ENSGT00940000160063.g.a ENSGT00890000139436.A.b.a.a ENSGT00940000165955.a.b ENSGT00940000165056.a.b ENSGT00730000110895.b.b.c.b ENSGT00940000166636.c ENSGT00390000003809.f ENSGT00940000164911.i ENSGT00940000159173.e ENSGT00940000161209.d ENSGT00940000156676.d.a ENSGT00950000183077.b.b ##22 ENSGT00390000000705.a ENSGT00390000008767.r ENSGT00940000154102.a.g.a.a ENSGT01030000234625.A.c.a ENSGT00530000063722.a.eb ENSGT00940000154102.a.g.b ENSGT00390000011228.a.a.b ENSGT01030000234625.A.d ENSGT00940000156861.a ENSGT00940000154427.A.e ENSGT00940000155325.a.a.b.a ENSGT00940000166975.g ENSGT00990000203541.a.a.b.g.c ENSGT00940000156194.m.a.b ENSGT00940000158175.b Golden-line barbel MODERN SPECIES 383 ENSSGRG00000011910 dnmt3ba (ENSSGRG00000009887) mapre1a (ENSSGRG00000009850) ENSSGRG00000009848 ENSSGRG00000009846 suv39h1a (ENSSGRG00000009843) gpr173 (ENSSGRG00000009842) ENSSGRG00000009840 sema3gb (ENSSGRG00000009605) wasb (ENSSGRG00000009595) slc38a5b (ENSSGRG00000008606) ccdc22 (ENSSGRG00000008335) tbc1d25 (ENSSGRG00000008331) ENSSGRG00000008330 ppardb (ENSSGRG00000008305) mkrn4 (ENSSGRG00000008304) ##22 fance (ENSSGRG00000008303) rpl10a (ENSSGRG00000008214) ENSSGRG00000008208 ENSSGRG00000008206 zgc:195245 (ENSSGRG00000008204) si:ch211-163l21.7 (ENSSGRG00000008201) ELAPOR1 (ENSSGRG00000008161) MAPK14 (ENSSGRG00000003893) srpk1a (ENSSGRG00000002309) lhfpl5b (ENSSGRG00000002295) Common carp reference MODERN SPECIES 23 ENSCCRG00000013944 dnmt3ba (ENSCCRG00000041848) mapre1a (ENSCCRG00000047695) ENSCCRG00000014191 suv39h1a (ENSCCRG00000041194) gpr173 (ENSCCRG00000065599) ENSCCRG00000074175 sema3gb (ENSCCRG00000047754) wasb (ENSCCRG00000048673) slc38a5b (ENSCCRG00000048683) ccdc22 (ENSCCRG00000050028) nt5dc2 (ENSCCRG00000001386) tbc1d25 (ENSCCRG00000081033) ENSCCRG00000074591 ppardb (ENSCCRG00000050104) mkrn4 (ENSCCRG00000058734) ##22 fance (ENSCCRG00000050167) rpl10a (ENSCCRG00000073150) ENSCCRG00000050215 si:ch211-163l21.7 (ENSCCRG00000008050) ENSCCRG00000008100 ENSCCRG00000061142 ENSCCRG00000011952 srpk1a (ENSCCRG00000012836) lhfpl5b (ENSCCRG00000004971) ENSCCRG00000066748 cpne5a (ENSCCRG00000055259) dclre1b (ENSCCRG00000025460) adora1b (ENSCCRG00000071109) ENSCCRG00000055657 zgc:110353 (ENSCCRG00000028268) Goldfish DUPLICATION Goldfish MODERN SPECIES 48 PTK6 (ENSCARG00000008399) ENSCARG00000008360 dnmt3ba (ENSCARG00000008145) mapre1a (ENSCARG00000008088) suv39h1a (ENSCARG00000008068) gpr173 (ENSCARG00000008061) ENSCARG00000008057 sema3gb (ENSCARG00000008013) wasb (ENSCARG00000007976) slc38a5b (ENSCARG00000007935) ccdc22 (ENSCARG00000007317) nt5dc2 (ENSCARG00000007099) tbc1d25 (ENSCARG00000007058) ENSCARG00000007044 ppardb (ENSCARG00000007004) mkrn4 (ENSCARG00000006980) ##22 fance (ENSCARG00000006949) rpl10a (ENSCARG00000006880) ENSCARG00000006865 zgc:195245 (ENSCARG00000006850) si:ch211-163l21.7 (ENSCARG00000006842) ELAPOR1 (ENSCARG00000006626) ENSCARG00000006124 srpk1a (ENSCARG00000005839) cpne5a (ENSCARG00000005201) dclre1b (ENSCARG00000005149) adora1b (ENSCARG00000005141) zgc:110353 (ENSCARG00000005133) mmp9 (ENSCARG00000004134) ZNF335 (ENSCARG00000003905) prok1 (ENSCARG00000003886) Goldfish MODERN SPECIES 1917 ccdc22 (ENSCARG00000035120) nt5dc2 (ENSCARG00000035161) tbc1d25 (ENSCARG00000035282) ENSCARG00000035296 ppardb (ENSCARG00000035312) mkrn4 (ENSCARG00000035386) ##22 fance (ENSCARG00000035397) rpl10a (ENSCARG00000035429) ENSCARG00000035602 zgc:195245 (ENSCARG00000035617) si:ch211-163l21.7 (ENSCARG00000035672) Zebrafish MODERN SPECIES 23 dnmt3ba (ENSDARG00000052402) mapre1a (ENSDARG00000042927) ENSDARG00000095805 suv39h1a (ENSDARG00000026799) gpr173 (ENSDARG00000042922) ENSDARG00000078279 sema3gb (ENSDARG00000013607) wasb (ENSDARG00000026350) slc38a5b (ENSDARG00000014587) ccdc22 (ENSDARG00000052379) nt5dc2 (ENSDARG00000059646) tbc1d25 (ENSDARG00000075333) cfp (ENSDARG00000094451) si:ch73-237c6.1 (ENSDARG00000078114) ppardb (ENSDARG00000009473) mkrn4 (ENSDARG00000028295) ##22 fance (ENSDARG00000068870) rpl10a (ENSDARG00000042905) ENSDARG00000095855 ENSDARG00000078155 zgc:195245 (ENSDARG00000078917) si:ch211-163l21.7 (ENSDARG00000034457) ELAPOR1 (ENSDARG00000042899) si:ch211-163l21.10 (ENSDARG00000068855) mapk14a (ENSDARG00000000857) srpk1a (ENSDARG00000073997) lhfpl5b (ENSDARG00000056458) cpne5a (ENSDARG00000061466) dclre1b (ENSDARG00000068833) ENSDARG00000110655 adora1b (ENSDARG00000075694) Characiphysae ANCESTRAL SPECIES 30 ENSGT00940000157106.g ENSGT00940000157007.i.a ENSGT00940000157261.k.b ENSGT00550000074865 ENSGT00940000170563 ENSGT00940000165387.a ENSGT00950000182844.a.a.b ENSGT00940000154468.tb.b.b ENSGT00390000015805.b ENSGT00940000157898 ENSGT00940000154471.a.a ENSGT00940000164911 ENSGT00940000159173 ENSGT00940000161209 ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00390000012644 ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000165930.B ENSGT00940000157415 Channel catfish MODERN SPECIES 24 ENSIPUG00000000518 ENSIPUG00000000522 ENSIPUG00000000523 suv39h1a (ENSIPUG00000000530) gpr173 (ENSIPUG00000000531) foxp3 (ENSIPUG00000000533) sema3gb (ENSIPUG00000000541) WAS (ENSIPUG00000000568) SLC38A3 (ENSIPUG00000000602) ENSIPUG00000000644 ccdc22 (ENSIPUG00000000650) nt5dc2 (ENSIPUG00000000667) tbc1d25 (ENSIPUG00000000683) cfp (ENSIPUG00000000699) ppard (ENSIPUG00000000702) mkrn4 (ENSIPUG00000000711) ##22 fance (ENSIPUG00000000720) rpl10a (ENSIPUG00000000731) ENSIPUG00000000762 c5h1orf194 (ENSIPUG00000000768) kiaa1324 (ENSIPUG00000000782) MAPK14 (ENSIPUG00000000798) srpk1a (ENSIPUG00000000830) lhfpl5b (ENSIPUG00000000841) clps (ENSIPUG00000000843) adora1b (ENSIPUG00000000851) dclre1b (ENSIPUG00000000854) cpne5a (ENSIPUG00000000871) ENSIPUG00000000973 col (ENSIPUG00000000976) lhfpl5b (ENSIPUG00000000993) Characiphysae_b ANCESTRAL SPECIES 34 ENSGT00940000157106.g ENSGT00940000157007.i.a ENSGT00940000157261.k.b ENSGT00550000074865 ENSGT00940000170563 ENSGT00940000165387.a ENSGT00950000182844.a.a.b ENSGT00940000154468.tb.b.b ENSGT00390000015805.b ENSGT00940000157898 ENSGT00940000154471.a.a ENSGT00940000164911 ENSGT00940000159173 ENSGT00940000161209 ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00390000012644 ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000165930.B ENSGT00940000157415 Characoidei ANCESTRAL SPECIES 109 ENSGT00940000157106.g ENSGT00940000157007.i.a ENSGT00940000157261.k.b ENSGT00550000074865 ENSGT00940000170563 ENSGT00940000165387.a ENSGT00950000182844.a.a.b ENSGT00940000154468.tb.b.b ENSGT00390000015805.b ENSGT00940000157898 ENSGT00940000154471.a.a ENSGT00940000164911 ENSGT00940000159173 ENSGT00940000161209 ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00390000012644.g ENSGT00390000012644.h ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000165930.B Red-bellied piranha MODERN SPECIES 470 dnmt3ba (ENSPNAG00000007115) mapre1a (ENSPNAG00000017072) ENSPNAG00000017092 ENSPNAG00000017106 suv39h1a (ENSPNAG00000017152) gpr173 (ENSPNAG00000017159) ENSPNAG00000017194 sema3gb (ENSPNAG00000017215) ENSPNAG00000017306 slc38a5b (ENSPNAG00000017364) ccdc22 (ENSPNAG00000017699) nt5dc2 (ENSPNAG00000017838) tbc1d25 (ENSPNAG00000017866) cfp (ENSPNAG00000003501) ppardb (ENSPNAG00000017903) mkrn4 (ENSPNAG00000017925) ##22 fance (ENSPNAG00000017940) rpl10a (ENSPNAG00000017943) ENSPNAG00000017968 ENSPNAG00000017974 zgc:195245 (ENSPNAG00000017998) si:ch211-163l21.7 (ENSPNAG00000018004) ELAPOR1 (ENSPNAG00000018014) MAPK14 (ENSPNAG00000018072) srpk1a (ENSPNAG00000018135) lhfpl5b (ENSPNAG00000018157) CLPS (ENSPNAG00000018178) ENSPNAG00000018217 ENSPNAG00000018224 Mexicana tetra MODERN SPECIES 21 dnmt3ba (ENSAMXG00000007591) mapre1a (ENSAMXG00000039425) ENSAMXG00000041265 suv39h1a (ENSAMXG00000031011) gpr173 (ENSAMXG00000025164) ENSAMXG00000007635 sema3gb (ENSAMXG00000007641) wasb (ENSAMXG00000007647) slc38a5b (ENSAMXG00000007651) ccdc22 (ENSAMXG00000007656) nt5dc2 (ENSAMXG00000031562) tbc1d25 (ENSAMXG00000033614) cfp (ENSAMXG00000007669) ENSAMXG00000042885 ppardb (ENSAMXG00000041846) mkrn4 (ENSAMXG00000007674) ##22 fance (ENSAMXG00000007675) rpl10a (ENSAMXG00000032692) ENSAMXG00000007679 ENSAMXG00000007680 zgc:195245 (ENSAMXG00000007681) si:ch211-163l21.7 (ENSAMXG00000036004) ELAPOR1 (ENSAMXG00000007684) mapk14a (ENSAMXG00000031533) srpk1a (ENSAMXG00000041841) lhfpl5b (ENSAMXG00000007081) CLPS (ENSAMXG00000035186) CLPS (ENSAMXG00000042346) cpne5a (ENSAMXG00000007702) dclre1b (ENSAMXG00000007713) adora1b (ENSAMXG00000007715) Electric eel DUPLICATION Electric eel MODERN SPECIES 807 mkrn4 (ENSEEEG00000007210) ##22 fance (ENSEEEG00000007211) rpl10a (ENSEEEG00000007214) ENSEEEG00000007259 si:ch211-163l21.7 (ENSEEEG00000007263) ELAPOR1 (ENSEEEG00000007264) MAPK14 (ENSEEEG00000007292) srpk1a (ENSEEEG00000007665) lhfpl5b (ENSEEEG00000008233) CLPS (ENSEEEG00000008234) cpne5a (ENSEEEG00000008238) dclre1b (ENSEEEG00000008244) Electric eel MODERN SPECIES 1147 slc38a5b (ENSEEEG00000011411) ccdc22 (ENSEEEG00000012001) nt5dc2 (ENSEEEG00000012013) tbc1d25 (ENSEEEG00000012035) cfp (ENSEEEG00000012038) ppardb (ENSEEEG00000012042) mkrn4 (ENSEEEG00000012053) ##22 Clupeiformes ANCESTRAL SPECIES 179 ENSGT00390000013740 ENSGT00940000164196.d ENSGT00940000159667.a ENSGT00990000204332 ENSGT00940000164755.B ENSGT00940000159667.b ENSGT00940000164755.D ENSGT00390000015154 ENSGT00950000183102.C ENSGT00950000183077.b ##22 ENSGT00390000017780.e ENSGT00390000008631.b ENSGT00940000166169 ENSGT01030000234637.b.c.h ENSGT00940000158528 ENSGT00940000153629.a.b ENSGT00950000183056.B.a.g ENSGT00390000005318.b.a.h ENSGT00520000055634.b.b ENSGT00940000154655.b ENSGT01030000234633.B.b.b ENSGT00390000008161.a.a.a.a ENSGT01020000230412.B.b.b.b.g.b ENSGT00940000168127.a.a ENSGT00940000157989.a.a Atlantic herring MODERN SPECIES 20 ENSCHAG00000014653 foxp3a (ENSCHAG00000014679) tspy (ENSCHAG00000014684) sema3ga (ENSCHAG00000014700) ENSCHAG00000015055 ENSCHAG00000015125 apex2 (ENSCHAG00000017194) zgc:162200 (ENSCHAG00000017199) ENSCHAG00000017219 renbp (ENSCHAG00000017634) kdm5c (ENSCHAG00000017824) IQSEC2 (ENSCHAG00000019449) ENSCHAG00000019465 gpkow (ENSCHAG00000019478) pqbp1 (ENSCHAG00000019490) mkrn4 (ENSCHAG00000019497) ##22 timm17b (ENSCHAG00000019513) praf2 (ENSCHAG00000019540) ENSCHAG00000019578 sypb (ENSCHAG00000020268) plp2b (ENSCHAG00000020276) ENSCHAG00000020290 ENSCHAG00000020305 mfsd2al2 (ENSCHAG00000020313) ENSCHAG00000020406 rad21l1 (ENSCHAG00000020420) fance (ENSCHAG00000020430) rpl10a (ENSCHAG00000020440) ENSCHAG00000020495 ENSCHAG00000020506 zgc:195245 (ENSCHAG00000020542) Denticle herring MODERN SPECIES 1 zgc:162200 (ENSDCDG00000025745) apex2 (ENSDCDG00000025749) SLC38A5 (ENSDCDG00000025798) ENSDCDG00000028173 sema3ga (ENSDCDG00000028195) tspy (ENSDCDG00000029264) foxp3a (ENSDCDG00000029267) ENSDCDG00000029269 suv39h1b (ENSDCDG00000029271) wdr13 (ENSDCDG00000029274) IQSEC2 (ENSDCDG00000029322) ENSDCDG00000030111 ENSDCDG00000030116 gpkow (ENSDCDG00000030122) pqbp1 (ENSDCDG00000030126) mkrn4 (ENSDCDG00000030129) ##22 timm17b (ENSDCDG00000030131) praf2 (ENSDCDG00000030134) jph2 (ENSDCDG00000030136) GDAP1L1 (ENSDCDG00000030139) fitm2 (ENSDCDG00000030141) nt5dc2 (ENSDCDG00000030150) ccdc22 (ENSDCDG00000030414) slc38a5b (ENSDCDG00000030450) wasb (ENSDCDG00000031292) sema3gb (ENSDCDG00000031324) ENSDCDG00000031488 gpr173 (ENSDCDG00000031490) suv39h1a (ENSDCDG00000031494) porcnl (ENSDCDG00000003101) PDZD4 (ENSDCDG00000003239) Euteleosteomorpha ANCESTRAL SPECIES 2 ENSGT00940000170524 ENSGT01060000248949 ENSGT00960000186993 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT01090000259987.a.a.b.f ENSGT00940000155440.c.b ENSGT01100000263685 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00530000063722.a ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00940000173571 ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 Protacanthopterygii ANCESTRAL SPECIES 6 ENSGT00950000183290 ENSGT01060000248949 ENSGT00960000186993 ENSGT00940000156263.k ENSGT00940000165418 ENSGT01080000257420.C.b.a ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT01090000259987.a.a.b.f ENSGT00940000155440.c.b ENSGT01100000263685 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00940000162196.c ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.b.a ENSGT00940000161154.b ENSGT00950000183042.b.a ENSGT00940000156977.f ENSGT00940000153110.B.e.a ENSGT00940000159659.d.a ENSGT00990000203541.a.b.a.b ENSGT00940000162649.e.a.b Salmoninae ANCESTRAL SPECIES 63 ENSGT00940000156260.d.c ENSGT01080000257420.C.b.a ENSGT00940000161971.q.a ENSGT00960000186993.b ENSGT00940000170524.a ENSGT01060000248949 ENSGT00940000156263.k.b ENSGT00950000182997.a.b.b.b.a.b.h.a ENSGT00940000155261.a.a.c ENSGT00940000159366.e ENSGT00940000154409.eb.a.c ENSGT00940000155440.c.b.h.b ENSGT01100000263685.b ENSGT00950000183017.b.b.a.b.a.f ENSGT00940000156676.d.d ENSGT00950000183077.b ##22 ENSGT00530000063722.a.kb ENSGT00940000154102.a.g.e ENSGT00390000011228.a.a.e ENSGT00940000162196.c ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.a.a.b.a ENSGT00940000161154.b.f ENSGT00950000183042.b.a ENSGT00940000156977.f.a ENSGT00940000159659.d.a.a ENSGT00990000203541.a.b.a.b.a ENSGT00940000157877.a.b ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.a ENSGT00940000166426.h Salmoninae_a DUPLICATION Salmoninae_a DUPLICATION Salmoninae_a ANCESTRAL SPECIES ENSGT00950000183077.b.e.a ##22 Oncorhynchus ANCESTRAL SPECIES 863 ENSGT00940000168139.a.a ENSGT00950000183077.b.e.a ##22 Oncorhynchus_a ANCESTRAL SPECIES 954 ENSGT00940000168139.a.a ENSGT00950000183077.b.e.a ##22 Coho salmon MODERN SPECIES 23 zgc:162816 (ENSOKIG00005032965) ENSOKIG00005032991 ENSOKIG00005033276 pecr (ENSOKIG00005033339) ndufb3 (ENSOKIG00005033350) ENSOKIG00005033361 XCR1 (ENSOKIG00005033419) NEUROD6 (ENSOKIG00005033423) ENSOKIG00005033428 bag1 (ENSOKIG00005033434) ENSOKIG00005033493 oprk1 (ENSOKIG00005033536) atp6v1h (ENSOKIG00005033648) rgs20 (ENSOKIG00005033785) ENSOKIG00005033794 ENSOKIG00005033805 ##22 ENSOKIG00005033817 ENSOKIG00005033831 Rainbow trout MODERN SPECIES 102 ENSOMYG00000053454 ENSOMYG00000074361 ENSOMYG00000063158 ENSOMYG00000056233 ##22 ENSOMYG00000050204 ENSOMYG00000074039 ENSOMYG00000063449 Salmo ANCESTRAL SPECIES 446 ENSGT00990000209827 ENSGT00940000177684.h.b ENSGT00950000183077.b.e.a ##22 River trout MODERN SPECIES 627 ENSSTUG00000026449 ENSSTUG00000026455 ENSSTUG00000026469 ##22 ENSSTUG00000026501 ENSSTUG00000026511 ENSSTUG00000026520 ENSSTUG00000026538 chic2 (ENSSTUG00000026544) ENSSTUG00000030524 ENSSTUG00000030574 ENSSTUG00000030582 ENSSTUG00000030647 ENSSTUG00000030649 ENSSTUG00000030655 ENSSTUG00000030673 ##22 ENSSTUG00000030680 ENSSTUG00000030698 kitb (ENSSTUG00000030728) Atlantic salmon MODERN SPECIES 4 tkt (ENSSSAG00000043688) ENSSSAG00000110115 ENSSSAG00000041442 ENSSSAG00000050662 ENSSSAG00000055506 ENSSSAG00000041270 ENSSSAG00000118211 KCNA3 (ENSSSAG00000101969) ENSSSAG00000041646 KCNA10 (ENSSSAG00000101897) ENSSSAG00000106480 ENSSSAG00000042378 ENSSSAG00000013353 ENSSSAG00000082478 ENSSSAG00000068269 ENSSSAG00000068264 ##22 ENSSSAG00000009522 ccdc115 (ENSSSAG00000059076) ENSSSAG00000099605 ENSSSAG00000091092 ENSSSAG00000081966 ENSSSAG00000052495 hsd17b10 (ENSSSAG00000041427) ENSSSAG00000050346 ENSSSAG00000104261 rpl10 (ENSSSAG00000054819) FLNA (ENSSSAG00000044359) ENSSSAG00000044135 ENSSSAG00000100895 ENSSSAG00000092814 ENSSSAG00000118795 Salmoninae_a ANCESTRAL SPECIES 458 ENSGT00940000172369 ENSGT00940000177684 ENSGT00950000183077.b.e.b ##22 Salmo ANCESTRAL SPECIES 445 ENSGT00940000172369 ENSGT00940000177684.g ENSGT00950000183077.b.e.b ##22 River trout DUPLICATION River trout MODERN SPECIES 627 ENSSTUG00000026449 ENSSTUG00000026455 ENSSTUG00000026469 ##22 ENSSTUG00000026501 ENSSTUG00000026511 ENSSTUG00000026520 ENSSTUG00000026538 chic2 (ENSSTUG00000026544) ENSSTUG00000030524 ENSSTUG00000030574 ENSSTUG00000030582 ENSSTUG00000030647 ENSSTUG00000030649 ENSSTUG00000030655 ENSSTUG00000030673 ##22 ENSSTUG00000030680 ENSSTUG00000030698 kitb (ENSSTUG00000030728) ENSSTUG00000030876 exoc1l (ENSSTUG00000031070) smc2 (ENSSTUG00000031085) ENSSTUG00000032002 ecpas (ENSSTUG00000032121) kdm4c (ENSSTUG00000035569) ENSSTUG00000035687 kdm4c (ENSSTUG00000035699) ENSSTUG00000035750 ecpas (ENSSTUG00000035768) smc2 (ENSSTUG00000035881) exoc1l (ENSSTUG00000037321) River trout MODERN SPECIES 627 ENSSTUG00000039459 mcl1b (ENSSTUG00000039455) ENSSTUG00000039454 ENSSTUG00000039445 ENSSTUG00000039435 ENSSTUG00000039430 ENSSTUG00000039405 chic2 (ENSSTUG00000039393) mcl1b (ENSSTUG00000039379) ENSSTUG00000039372 ##22 ENSSTUG00000039361 ENSSTUG00000039353 ENSSTUG00000039311 ENSSTUG00000039230 ENSSTUG00000039207 kitb (ENSSTUG00000038998) CLOCK (ENSSTUG00000037366) ENSSTUG00000037329 exoc1l (ENSSTUG00000037321) smc2 (ENSSTUG00000035881) ecpas (ENSSTUG00000035768) ENSSTUG00000035750 kdm4c (ENSSTUG00000035699) ENSSTUG00000035687 kdm4c (ENSSTUG00000035569) Salmoninae_a ANCESTRAL SPECIES 14 ENSGT00940000154256.`c.d ENSGT00940000156260.d.c ENSGT01080000257420.C.b.a ENSGT00940000161971.q.a ENSGT00940000170524.a ENSGT01060000248949 ENSGT00940000156263.k.b ENSGT00950000182997.a.b.b.b.a.b.h.a ENSGT00940000155261.a.a.c ENSGT00940000159366.e ENSGT00940000154409.eb.a.c ENSGT00940000155440.c.b.h.b ENSGT01100000263685.b ENSGT00950000183017.b.b.a.b.a.f ENSGT00940000156676.d.d ENSGT00950000183077.b.f ##22 ENSGT00530000063722.a.kb ENSGT00940000154102.a.g.e ENSGT00390000011228.a.a.e ENSGT00940000162196.c ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.a.a.b.a ENSGT00940000161154.b.f ENSGT00950000183042.b.a ENSGT00940000156977.f.a ENSGT00940000159659.d.a.a ENSGT00990000203541.a.b.a.b.a ENSGT00940000157877.a.b ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.a ENSGT00940000166426.h Salmo ANCESTRAL SPECIES 4 ENSGT00940000154256.ac.d ENSGT00940000154256.`c.d ENSGT00940000156260.d.c ENSGT01080000257420.C.b.a ENSGT00940000161971.q.a ENSGT00940000170524.a ENSGT00940000156263.k.b ENSGT00950000182997.a.b.b.b.a.b.h.a ENSGT00940000155261.a.a.c ENSGT00940000159366.e ENSGT00940000154409.eb.a.c ENSGT00940000155440.c.b.h.b ENSGT01100000263685.b ENSGT00950000183017.b.b.a.b.a.f ENSGT00940000156676.d.d ENSGT00950000183077.b.f ##22 ENSGT00530000063722.a.kb ENSGT00940000154102.a.g.e ENSGT00390000011228.a.a.e ENSGT00940000162196.c ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.a.a.b.a ENSGT00940000161154.b.f ENSGT00950000183042.b.a ENSGT00940000156977.f.a ENSGT00940000159659.d.a.a ENSGT00990000203541.a.b.a.b.a ENSGT00940000157877.a.b ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.a ENSGT00940000166426.h River trout MODERN SPECIES 23 dtx3 (ENSSTUG00000035988) ptges3a (ENSSTUG00000035965) mipa (ENSSTUG00000035954) stat6 (ENSSTUG00000035341) FIGNL2 (ENSSTUG00000035309) ENSSTUG00000035298 SCN8A (ENSSTUG00000033206) dip2ba (ENSSTUG00000027970) atf7a (ENSSTUG00000027744) asb8 (ENSSTUG00000027732) ENSSTUG00000027689 pfkma (ENSSTUG00000018386) ENSSTUG00000048192 def6a (ENSSTUG00000048180) ppardb (ENSSTUG00000048144) mkrn4 (ENSSTUG00000048122) ##22 ENSSTUG00000048110 zgc:195245 (ENSSTUG00000048103) ENSSTUG00000048097 si:ch211-163l21.7 (ENSSTUG00000048091) ELAPOR1 (ENSSTUG00000047217) MAPK14 (ENSSTUG00000046979) ENSSTUG00000046969 ENSSTUG00000046931 klf15 (ENSSTUG00000046913) CPNE9 (ENSSTUG00000046715) LHFPL4 (ENSSTUG00000046700) ENSSTUG00000046694 ENSSTUG00000045709 zgc:171775 (ENSSTUG00000045581) ENSSTUG00000045417 Atlantic salmon MODERN SPECIES 4 ENSSSAG00000105200 stat6 (ENSSSAG00000080589) ENSSSAG00000090857 ENSSSAG00000118469 ENSSSAG00000083080 ENSSSAG00000086821 dip2ba (ENSSSAG00000109064) atf7a (ENSSSAG00000074545) ASB8 (ENSSSAG00000074543) ENSSSAG00000074534 pfkma (ENSSSAG00000074134) ENSSSAG00000074095 ENSSSAG00000074107 ENSSSAG00000074034 ENSSSAG00000099367 ENSSSAG00000101309 ##22 ENSSSAG00000091829 ENSSSAG00000074026 ENSSSAG00000114082 kiaa1324 (ENSSSAG00000073738) si:ch211-163l21.7 (ENSSSAG00000095723) ENSSSAG00000114242 ENSSSAG00000073588 ENSSSAG00000073303 klf15 (ENSSSAG00000073280) ENSSSAG00000097757 ENSSSAG00000072024 ENSSSAG00000091037 ENSSSAG00000071964 ENSSSAG00000064961 zgc:171775 (ENSSSAG00000064548) Oncorhynchus ANCESTRAL SPECIES 7 ENSGT00940000154256.`c.d ENSGT00940000156260.d.c ENSGT01080000257420.C.b.a ENSGT00940000161971.q.a ENSGT00940000170524.a ENSGT01060000248949 ENSGT00940000156263.k.b ENSGT00950000182997.a.b.b.b.a.b.h.a ENSGT00940000155261.a.a.c ENSGT00940000159366.e ENSGT00940000154409.eb.a.c ENSGT00940000155440.c.b.h.b ENSGT01100000263685.b ENSGT00950000183017.b.b.a.b.a.f ENSGT00940000156676.d.d ENSGT00950000183077.b.f ##22 ENSGT00530000063722.a.kb ENSGT00940000154102.a.g.e ENSGT00390000011228.a.a.e ENSGT00940000162196.c ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.a.a.b.a ENSGT00940000161154.b.f ENSGT00950000183042.b.a ENSGT00940000156977.f.a ENSGT00940000159659.d.a.a ENSGT00990000203541.a.b.a.b.a ENSGT00940000157877.a.b ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.a ENSGT00940000166426.h Oncorhynchus_a ANCESTRAL SPECIES 9 ENSGT00940000156260.d.c ENSGT01080000257420.C.b.a ENSGT00940000161971.q.a ENSGT00940000170524.a ENSGT01060000248949 ENSGT00940000156263.k.b ENSGT00950000182997.a.b.b.b.a.b.h.a ENSGT00940000155261.a.a.c ENSGT00940000159366.e ENSGT00940000154409.eb.a.c ENSGT00940000155440.c.b.h.b ENSGT01100000263685.b ENSGT01100000263526.A.b.b.a.b.a.a.a.a.b.a.b.a.a ENSGT00950000183017.b.b.a.b.a.f ENSGT00940000156676.d.d ENSGT00950000183077.b.f ##22 ENSGT00530000063722.a.kb ENSGT00940000154102.a.g.e ENSGT00390000011228.a.a.e ENSGT00940000162196.c ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.a.a.b.a ENSGT00940000161154.b.f ENSGT00950000183042.b.a ENSGT00940000156977.f.a ENSGT00940000159659.d.a.a ENSGT00990000203541.a.b.a.b.a ENSGT00940000157877.a.b ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.a ENSGT00940000166426.h Chinook salmon MODERN SPECIES 14 mipa (ENSOTSG00005045249) ENSOTSG00005045248 stat6 (ENSOTSG00005045246) FIGNL2 (ENSOTSG00005045245) ENSOTSG00005045244 SCN8A (ENSOTSG00005045197) dip2ba (ENSOTSG00005044982) atf7a (ENSOTSG00005044950) asb8 (ENSOTSG00005044949) ENSOTSG00005044948 pfkma (ENSOTSG00005032494) ENSOTSG00005032460 ENSOTSG00005032459 def6a (ENSOTSG00005032423) ppardb (ENSOTSG00005032417) mkrn4 (ENSOTSG00005032415) ##22 ENSOTSG00005032413 ENSOTSG00005032410 zgc:195245 (ENSOTSG00005032409) ENSOTSG00005032408 si:ch211-163l21.7 (ENSOTSG00005032407) ELAPOR1 (ENSOTSG00005030398) MAPK14 (ENSOTSG00005030283) ENSOTSG00005030276 ENSOTSG00005030264 klf15 (ENSOTSG00005030261) CPNE9 (ENSOTSG00005028364) LHFPL4 (ENSOTSG00005028359) ENSOTSG00005028357 ENSOTSG00005027969 zgc:171775 (ENSOTSG00005027943) Coho salmon MODERN SPECIES 16 mipa (ENSOKIG00005018447) stat6 (ENSOKIG00005018338) FIGNL2 (ENSOKIG00005018320) ENSOKIG00005018299 ENSOKIG00005018289 SCN8A (ENSOKIG00005017970) dip2ba (ENSOKIG00005016617) atf7a (ENSOKIG00005016525) asb8 (ENSOKIG00005016513) ENSOKIG00005016478 pfkma (ENSOKIG00005011510) ENSOKIG00005011246 ENSOKIG00005011243 def6a (ENSOKIG00005011211) ppardb (ENSOKIG00005011188) mkrn4 (ENSOKIG00005011165) ##22 ENSOKIG00005011154 ENSOKIG00005011138 zgc:195245 (ENSOKIG00005011126) ENSOKIG00005011120 si:ch211-163l21.7 (ENSOKIG00005011107) ELAPOR1 (ENSOKIG00005009223) MAPK14 (ENSOKIG00005009037) ENSOKIG00005009020 ENSOKIG00005008885 klf15 (ENSOKIG00005008871) CPNE9 (ENSOKIG00005008062) LHFPL4 (ENSOKIG00005008010) ENSOKIG00005007981 ENSOKIG00005007129 zgc:171775 (ENSOKIG00005006971) Rainbow trout MODERN SPECIES 7 ENSOMYG00000039954 stat6 (ENSOMYG00000039901) ENSOMYG00000039826 ENSOMYG00000039817 ENSOMYG00000039805 ENSOMYG00000036247 dip2ba (ENSOMYG00000030137) atf7a (ENSOMYG00000028168) asb8 (ENSOMYG00000028129) ENSOMYG00000028102 ENSOMYG00000065041 pfkma (ENSOMYG00000026447) ENSOMYG00000026144 ENSOMYG00000025844 ENSOMYG00000025767 ENSOMYG00000025668 ##22 ENSOMYG00000077164 ENSOMYG00000025615 zgc:195245 (ENSOMYG00000025602) ENSOMYG00000025594 si:ch211-163l21.7 (ENSOMYG00000025583) ENSOMYG00000023071 ENSOMYG00000022088 ENSOMYG00000052810 ENSOMYG00000021948 ENSOMYG00000021925 klf15 (ENSOMYG00000021895) ENSOMYG00000062896 ENSOMYG00000019745 ENSOMYG00000019334 ENSOMYG00000019282 Huchen DUPLICATION Huchen MODERN SPECIES 10077 ENSHHUG00000011971 ##22 Huchen MODERN SPECIES 91 ENSHHUG00000045485 ptges3a (ENSHHUG00000045472) mipa (ENSHHUG00000045403) stat6 (ENSHHUG00000045387) FIGNL2 (ENSHHUG00000045385) ENSHHUG00000045382 SCN8A (ENSHHUG00000045379) dip2ba (ENSHHUG00000044804) atf7a (ENSHHUG00000044793) asb8 (ENSHHUG00000044790) LARP4 (ENSHHUG00000044781) pfkma (ENSHHUG00000044677) ENSHHUG00000044668 def6a (ENSHHUG00000044647) ppardb (ENSHHUG00000044609) mkrn4 (ENSHHUG00000044606) ##22 ENSHHUG00000044600 ENSHHUG00000044595 zgc:195245 (ENSHHUG00000044593) ENSHHUG00000044591 si:ch211-163l21.7 (ENSHHUG00000044588) ELAPOR1 (ENSHHUG00000044519) MAPK14 (ENSHHUG00000044373) ENSHHUG00000044369 SLC41A3 (ENSHHUG00000044346) Northern pike DUPLICATION Northern pike DUPLICATION Northern pike DUPLICATION Northern pike DUPLICATION Northern pike MODERN SPECIES 26 ENSELUG00000029067 ENSELUG00000030958 ##22 ENSELUG00000028144 ENSELUG00000001696 ENSELUG00000028521 ENSELUG00000026989 ##22 ENSELUG00000027273 ENSELUG00000032588 ##22 ENSELUG00000026473 Northern pike MODERN SPECIES 26 ENSELUG00000029067 ENSELUG00000030958 ##22 ENSELUG00000028144 ENSELUG00000001696 ENSELUG00000028521 ENSELUG00000026989 ##22 ENSELUG00000027273 ENSELUG00000032588 ##22 ENSELUG00000026473 Northern pike MODERN SPECIES 26 ENSELUG00000029067 ENSELUG00000030958 ##22 ENSELUG00000028144 ENSELUG00000001696 ENSELUG00000028521 ENSELUG00000026989 ##22 ENSELUG00000027273 ENSELUG00000032588 ##22 ENSELUG00000026473 Northern pike MODERN SPECIES 12 DDX31 (ENSELUG00000001052) BARHL1 (ENSELUG00000009660) cfap77 (ENSELUG00000029762) ENSELUG00000009698 gsnb (ENSELUG00000028993) ENSELUG00000009796 rab14 (ENSELUG00000009832) C5 (ENSELUG00000009867) PRDM12 (ENSELUG00000009905) ENSELUG00000009949 ENSELUG00000029596 ENSELUG00000010027 ENSELUG00000001695 ENSELUG00000032286 ENSELUG00000026693 ENSELUG00000028436 ##22 ENSELUG00000029473 ENSELUG00000034030 ENSELUG00000029402 ENSELUG00000027224 cmya5 (ENSELUG00000001671) homer1b (ENSELUG00000001669) ENSELUG00000033578 ENSELUG00000031424 ENSELUG00000024272 otpb (ENSELUG00000024238) msh3 (ENSELUG00000024211) SURF4 (ENSELUG00000023867) dnm1b (ENSELUG00000016137) ENSELUG00000016245 ENSELUG00000001639 Northern pike MODERN SPECIES 11 FIGNL2 (ENSELUG00000028965) ENSELUG00000010837 ENSELUG00000010863 ENSELUG00000010904 ENSELUG00000010953 dip2ba (ENSELUG00000011023) atf7a (ENSELUG00000011058) asb8 (ENSELUG00000034312) ENSELUG00000000395 ITGB7 (ENSELUG00000011177) pfkma (ENSELUG00000011249) ENSELUG00000011277 ENSELUG00000030242 def6a (ENSELUG00000011299) ppardb (ENSELUG00000011315) mkrn4 (ENSELUG00000011371) ##22 fance (ENSELUG00000011398) RPL10A (ENSELUG00000011426) INAVA (ENSELUG00000011485) zgc:195245 (ENSELUG00000011508) ENSELUG00000011516 si:ch211-163l21.7 (ENSELUG00000011529) ELAPOR1 (ENSELUG00000011599) MAPK14 (ENSELUG00000011666) ENSELUG00000001479 CHST13 (ENSELUG00000011711) ENSELUG00000011748 ENSELUG00000011783 CPNE9 (ENSELUG00000011866) LHFPL4 (ENSELUG00000011908) ENSELUG00000033176 Acanthomorphata ANCESTRAL SPECIES 20 ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00950000183290 ENSGT00940000156263.k ENSGT00940000162777 ENSGT01060000248949 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 Euacanthomorphacea ANCESTRAL SPECIES 2 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00950000183290 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 Pinecone sodierfish MODERN SPECIES 21 mipa (ENSMMDG00005018648) stat6 (ENSMMDG00005018650) FIGNL2 (ENSMMDG00005018659) ENSMMDG00005018662 SCN8A (ENSMMDG00005018664) ENSMMDG00005018683 ENSMMDG00005018689 dip2ba (ENSMMDG00005018700) atf7a (ENSMMDG00005018783) asb8 (ENSMMDG00005018786) LARP4 (ENSMMDG00005018789) pfkma (ENSMMDG00005018794) ENSMMDG00005018803 def6a (ENSMMDG00005018805) ppardb (ENSMMDG00005018807) mkrn4 (ENSMMDG00005018811) ##22 fance (ENSMMDG00005018812) rpl10a (ENSMMDG00005018817) ENSMMDG00005018824 zgc:195245 (ENSMMDG00005018827) smc5 (ENSMMDG00005018837) ENSMMDG00005020360 ELAPOR1 (ENSMMDG00005020363) MAPK14 (ENSMMDG00005020368) srpk1a (ENSMMDG00005020398) lhfpl5b (ENSMMDG00005020406) cpne5a (ENSMMDG00005020409) dclre1b (ENSMMDG00005020415) adora1b (ENSMMDG00005020418) mmp9 (ENSMMDG00005020423) ZNF335 (ENSMMDG00005020440) Percomorphaceae ANCESTRAL SPECIES 7 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00950000183290 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 Tiger tail seahorse MODERN SPECIES 275 ppardb (ENSHCOG00000000272) mkrn4 (ENSHCOG00000008354) ##22 fance (ENSHCOG00000008426) rpl10a (ENSHCOG00000008437) INAVA (ENSHCOG00000008478) zgc:195245 (ENSHCOG00000008497) ENSHCOG00000008517 CACNB4 (ENSHCOG00000008545) ENSHCOG00000008550 SEMA5B (ENSHCOG00000008566) kpnb3 (ENSHCOG00000008608) atg13 (ENSHCOG00000008662) creb3l1 (ENSHCOG00000008669) zgc:110699 (ENSHCOG00000008681) ndufs1 (ENSHCOG00000008721) unc50 (ENSHCOG00000008739) ENSHCOG00000008746 Percomorphaceae_B ANCESTRAL SPECIES 6 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00950000183290 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 Ovalentaria ANCESTRAL SPECIES 6 ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT01060000248949 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Atherinomorphae ANCESTRAL SPECIES 3 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00950000183290 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00530000063722.a ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 Cyprinodontiformes ANCESTRAL SPECIES 4 ENSGT00940000154256.`c ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00530000063722.a ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.b.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 Aplocheiloidei ANCESTRAL SPECIES ENSGT00940000154256.`c ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.b.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Turquoise killifish MODERN SPECIES 1624 mipa (ENSNFUG00015024084) stat6 (ENSNFUG00015024081) ENSNFUG00015024079 ENSNFUG00015024076 SCN8A (ENSNFUG00015024043) ENSNFUG00015024028 dip2ba (ENSNFUG00015023971) ATF7A (ENSNFUG00015023946) asb8 (ENSNFUG00015023934) LARP4AA (ENSNFUG00015023911) pfkma (ENSNFUG00015023856) ENSNFUG00015023846 DEF6A (ENSNFUG00015023835) ppardb (ENSNFUG00015023827) ENSNFUG00015023823 mkrn4 (ENSNFUG00015023820) ##22 fance (ENSNFUG00015023817) RPL10A (ENSNFUG00015023812) C8H1ORF106 (ENSNFUG00015023806) zgc:195245 (ENSNFUG00015023803) ENSNFUG00015023676 mapk14b (ENSNFUG00015023250) srpk1a (ENSNFUG00015023169) lhfpl5b (ENSNFUG00015023161) CPNE5 (ENSNFUG00015023021) dclre1b (ENSNFUG00015023000) ENSNFUG00015022999 adora1b (ENSNFUG00015022998) mmp9 (ENSNFUG00015022858) ZNF335 (ENSNFUG00015022709) ENSNFUG00015022697 Mangrove rivulus MODERN SPECIES 144 ptges3a (ENSKMAG00000006256) mipa (ENSKMAG00000006281) stat6 (ENSKMAG00000006296) FIGNL2 (ENSKMAG00000006325) ENSKMAG00000006339 SCN8A (ENSKMAG00000006355) ENSKMAG00000006458 dip2ba (ENSKMAG00000006632) atf7a (ENSKMAG00000006747) asb8 (ENSKMAG00000006776) LARP4 (ENSKMAG00000006800) pfkma (ENSKMAG00000006849) ENSKMAG00000006921 def6a (ENSKMAG00000006940) ppardb (ENSKMAG00000006991) mkrn4 (ENSKMAG00000007023) ##22 fance (ENSKMAG00000007058) rpl10a (ENSKMAG00000007076) ENSKMAG00000007094 ENSKMAG00000007117 zgc:195245 (ENSKMAG00000007134) smc5 (ENSKMAG00000007174) ENSKMAG00000007214 ELAPOR1 (ENSKMAG00000007245) mapk14a (ENSKMAG00000007293) srpk1a (ENSKMAG00000007340) lhfpl5b (ENSKMAG00000007398) cpne5a (ENSKMAG00000007436) dclre1b (ENSKMAG00000007543) Cyprinodontoidei ANCESTRAL SPECIES 3 ENSGT00940000154256.`c ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.b.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 NAME_4 ANCESTRAL SPECIES 4 ENSGT00940000161404 ENSGT00940000154256.`c ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.b.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Mummichog MODERN SPECIES 2277 SCN8A (ENSFHEG00000004206) ENSFHEG00000004211 dip2ba (ENSFHEG00000004287) atf7a (ENSFHEG00000004308) asb8 (ENSFHEG00000004321) ENSFHEG00000004338 pfkma (ENSFHEG00000004399) ENSFHEG00000004418 def6a (ENSFHEG00000004483) ppardb (ENSFHEG00000004510) mkrn4 (ENSFHEG00000004528) ##22 fance (ENSFHEG00000000118) rpl10a (ENSFHEG00000004562) ENSFHEG00000004569 ENSFHEG00000004582 zgc:195245 (ENSFHEG00000004607) smc5 (ENSFHEG00000004622) ENSFHEG00000004631 ELAPOR1 (ENSFHEG00000004678) mapk14a (ENSFHEG00000004796) srpk1a (ENSFHEG00000004819) lhfpl5b (ENSFHEG00000004829) cpne5a (ENSFHEG00000004889) dclre1b (ENSFHEG00000004898) adora1b (ENSFHEG00000004910) mmp9 (ENSFHEG00000004917) Sheepshead minnow MODERN SPECIES 637 rnd1b (ENSCVAG00000005170) DTX3 (ENSCVAG00000005211) dtx3 (ENSCVAG00000005219) ptges3a (ENSCVAG00000005231) mipa (ENSCVAG00000005237) stat6 (ENSCVAG00000005255) FIGNL2 (ENSCVAG00000005263) SCN8A (ENSCVAG00000005320) ENSCVAG00000005363 dip2ba (ENSCVAG00000005440) atf7a (ENSCVAG00000005466) ENSCVAG00000005488 pfkma (ENSCVAG00000005552) def6a (ENSCVAG00000005579) ppardb (ENSCVAG00000005599) mkrn4 (ENSCVAG00000005612) ##22 fance (ENSCVAG00000005690) rpl10a (ENSCVAG00000005717) Poeciliinae ANCESTRAL SPECIES 2 ENSGT00940000154256.`c ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00940000162430 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.b.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Poecilia ANCESTRAL SPECIES 14 ENSGT00940000154256.`c ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00940000162430 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.b.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415.c NAME_6 ANCESTRAL SPECIES 45 ENSGT00940000154256.`c ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00940000162430 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.b.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415.c Sailfin molly MODERN SPECIES 1166 asb8 (ENSPLAG00000013652) ENSPLAG00000013626 pfkma (ENSPLAG00000013606) ENSPLAG00000013508 def6a (ENSPLAG00000013498) ppardb (ENSPLAG00000013453) mkrn4 (ENSPLAG00000013447) ##22 fance (ENSPLAG00000013421) rpl10a (ENSPLAG00000013411) ENSPLAG00000013407 zgc:195245 (ENSPLAG00000013379) smc5 (ENSPLAG00000013370) ENSPLAG00000013347 ELAPOR1 (ENSPLAG00000013333) mapk14a (ENSPLAG00000013277) srpk1a (ENSPLAG00000013249) lhfpl5b (ENSPLAG00000012918) Amazon molly MODERN SPECIES 331 ENSPFOG00000012339 dtx3 (ENSPFOG00000012343) ptges3a (ENSPFOG00000012365) mipa (ENSPFOG00000012451) stat6 (ENSPFOG00000012474) FIGNL2 (ENSPFOG00000012568) SCN8A (ENSPFOG00000012576) dip2ba (ENSPFOG00000012731) atf7a (ENSPFOG00000012991) asb8 (ENSPFOG00000013137) ENSPFOG00000013148 pfkma (ENSPFOG00000013294) ENSPFOG00000024315 def6a (ENSPFOG00000013490) ppardb (ENSPFOG00000013601) mkrn4 (ENSPFOG00000024691) ##22 fance (ENSPFOG00000013659) rpl10a (ENSPFOG00000013715) rpl10a (ENSPFOG00000013688) ENSPFOG00000022141 ENSPFOG00000013738 zgc:195245 (ENSPFOG00000013816) smc5 (ENSPFOG00000013836) ELAPOR1 (ENSPFOG00000013990) mapk14a (ENSPFOG00000014153) srpk1a (ENSPFOG00000014203) Guppy MODERN SPECIES 459 stat6 (ENSPREG00000022378) FIGNL2 (ENSPREG00000022426) ENSPREG00000022429 SCN8A (ENSPREG00000022435) ENSPREG00000022456 ENSPREG00000022459 ENSPREG00000022495 dip2ba (ENSPREG00000022566) atf7a (ENSPREG00000022581) asb8 (ENSPREG00000022594) ENSPREG00000022597 pfkma (ENSPREG00000022604) ENSPREG00000022612 def6a (ENSPREG00000022620) ppardb (ENSPREG00000022630) mkrn4 (ENSPREG00000022638) ##22 fance (ENSPREG00000022647) rpl10a (ENSPREG00000022666) ENSPREG00000022697 zgc:195245 (ENSPREG00000022704) smc5 (ENSPREG00000022711) ENSPREG00000022721 ELAPOR1 (ENSPREG00000022729) mapk14a (ENSPREG00000022744) srpk1a (ENSPREG00000022757) lhfpl5b (ENSPREG00000022766) cpne5a (ENSPREG00000022770) dclre1b (ENSPREG00000022775) ENSPREG00000022782 adora1b (ENSPREG00000022791) mmp9 (ENSPREG00000022793) Platyfish MODERN SPECIES mipa (ENSXMAG00000010614) stat6 (ENSXMAG00000010611) FIGNL2 (ENSXMAG00000026987) ENSXMAG00000026382 SCN8A (ENSXMAG00000007895) ENSXMAG00000010605 dip2ba (ENSXMAG00000010552) atf7a (ENSXMAG00000010537) asb8 (ENSXMAG00000025707) ENSXMAG00000028242 ENSXMAG00000010519 pfkma (ENSXMAG00000010493) ENSXMAG00000024756 def6a (ENSXMAG00000010474) ppardb (ENSXMAG00000010449) mkrn4 (ENSXMAG00000010448) ##22 fance (ENSXMAG00000010442) rpl10a (ENSXMAG00000027435) ENSXMAG00000010428 zgc:195245 (ENSXMAG00000010427) smc5 (ENSXMAG00000010404) ELAPOR1 (ENSXMAG00000010362) mapk14a (ENSXMAG00000010317) srpk1a (ENSXMAG00000010290) lhfpl5b (ENSXMAG00000010289) cpne5a (ENSXMAG00000023235) dclre1b (ENSXMAG00000010206) adora1b (ENSXMAG00000010202) mmp9 (ENSXMAG00000010153) ZNF335 (ENSXMAG00000010129) prok1 (ENSXMAG00000024068) Oryzias ANCESTRAL SPECIES 4 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00950000183290 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00990000203931 ENSGT00550000074816.B ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Oryzias_b ANCESTRAL SPECIES 2 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00950000183290 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00990000203931 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 ENSGT00940000166935 Indian medaka MODERN SPECIES 23 ptges3a (ENSOMEG00000019283) mipa (ENSOMEG00000019312) stat6 (ENSOMEG00000019401) FIGNL2 (ENSOMEG00000019430) ENSOMEG00000019441 SCN8A (ENSOMEG00000019478) ENSOMEG00000019530 dip2ba (ENSOMEG00000019595) atf7a (ENSOMEG00000019624) asb8 (ENSOMEG00000019634) LARP4 (ENSOMEG00000019749) pfkma (ENSOMEG00000019837) ENSOMEG00000019910 def6a (ENSOMEG00000019977) ppardb (ENSOMEG00000020023) mkrn4 (ENSOMEG00000020049) ##22 fance (ENSOMEG00000020064) rpl10a (ENSOMEG00000020096) ENSOMEG00000020133 zgc:195245 (ENSOMEG00000020147) ENSOMEG00000020191 ENSOMEG00000020208 ELAPOR1 (ENSOMEG00000020232) MAPK14 (ENSOMEG00000020288) srpk1a (ENSOMEG00000020378) lhfpl5b (ENSOMEG00000020410) cpne5a (ENSOMEG00000020486) dclre1b (ENSOMEG00000020517) adora1b (ENSOMEG00000020524) mmp9 (ENSOMEG00000020574) ZNF335 (ENSOMEG00000020613) Javanese ricefish MODERN SPECIES 21 mipa (ENSOJAG00000021911) stat6 (ENSOJAG00000021877) FIGNL2 (ENSOJAG00000021862) ENSOJAG00000021851 ENSOJAG00000021847 SCN8A (ENSOJAG00000021181) ENSOJAG00000021066 dip2ba (ENSOJAG00000017844) atf7a (ENSOJAG00000017440) asb8 (ENSOJAG00000017418) LARP4 (ENSOJAG00000017413) pfkma (ENSOJAG00000017033) ENSOJAG00000016980 def6a (ENSOJAG00000016963) ppardb (ENSOJAG00000016935) mkrn4 (ENSOJAG00000016924) ##22 fance (ENSOJAG00000016912) rpl10a (ENSOJAG00000016849) ENSOJAG00000016841 ENSOJAG00000016792 ENSOJAG00000016194 zgc:195245 (ENSOJAG00000016139) ELAPOR1 (ENSOJAG00000015439) MAPK14 (ENSOJAG00000015168) srpk1a (ENSOJAG00000013638) lhfpl5b (ENSOJAG00000013510) cpne5a (ENSOJAG00000012585) dclre1b (ENSOJAG00000012471) adora1b (ENSOJAG00000012463) mmp9 (ENSOJAG00000010824) ZNF335 (ENSOJAG00000010652) Oryzias_a ANCESTRAL SPECIES ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00990000203931 ENSGT01000000217912 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Japanese Medaka HdrR MODERN SPECIES 21 mipa (ENSORLG00000020190) stat6 (ENSORLG00000024001) FIGNL2 (ENSORLG00000006937) ENSORLG00000025881 ENSORLG00000025801 SCN8A (ENSORLG00000006930) ENSORLG00000006898 dip2ba (ENSORLG00000006887) atf7a (ENSORLG00000006799) asb8 (ENSORLG00000024296) ENSORLG00000006758 pfkma (ENSORLG00000006734) ENSORLG00000006663 def6a (ENSORLG00000006652) ppardb (ENSORLG00000006636) mkrn4 (ENSORLG00000006615) ##22 fance (ENSORLG00000006609) rpl10a (ENSORLG00000006600) ENSORLG00000006585 zgc:195245 (ENSORLG00000006578) smc5 (ENSORLG00000006574) ENSORLG00000025906 ELAPOR1 (ENSORLG00000006540) MAPK14 (ENSORLG00000006477) srpk1a (ENSORLG00000006445) lhfpl5b (ENSORLG00000006380) ENSORLG00000023802 cpne5a (ENSORLG00000006371) dclre1b (ENSORLG00000006355) adora1b (ENSORLG00000006349) mmp9 (ENSORLG00000006340) Ovalentaria_B ANCESTRAL SPECIES 2 ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT01060000248949 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00990000203931 ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Pomacentridae ANCESTRAL SPECIES 2 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00950000183290 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 ENSGT00940000162710.c.a ENSGT00940000166935 Pomacentridae_A ANCESTRAL SPECIES 12 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT01060000248949 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 ENSGT00940000162710.c.a ENSGT00940000166935 Amphiprion ANCESTRAL SPECIES 29 ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT01060000248949 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00530000063722.a ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 ENSGT00940000162710.c.a ENSGT00940000166935 Orange clownfish MODERN SPECIES 22 ENSAPEG00000018579 stat6 (ENSAPEG00000018599) FIGNL2 (ENSAPEG00000018630) ENSAPEG00000018639 SCN8A (ENSAPEG00000018655) ENSAPEG00000018722 ENSAPEG00000018750 dip2ba (ENSAPEG00000018911) atf7a (ENSAPEG00000019006) asb8 (ENSAPEG00000019041) ENSAPEG00000019058 pfkma (ENSAPEG00000019092) ENSAPEG00000019205 def6a (ENSAPEG00000019233) ppardb (ENSAPEG00000019291) mkrn4 (ENSAPEG00000019319) ##22 fance (ENSAPEG00000019332) rpl10a (ENSAPEG00000019421) ENSAPEG00000019450 INAVA (ENSAPEG00000019462) zgc:195245 (ENSAPEG00000019478) ELAPOR1 (ENSAPEG00000019511) MAPK14 (ENSAPEG00000019544) srpk1a (ENSAPEG00000019620) cpne5a (ENSAPEG00000019725) dclre1b (ENSAPEG00000019877) adora1b (ENSAPEG00000019884) mmp9 (ENSAPEG00000019893) ZNF335 (ENSAPEG00000019914) ENSAPEG00000020000 prok1 (ENSAPEG00000020014) Clown anemonefish MODERN SPECIES 702 FIGNL2 (ENSAOCG00000013032) ENSAOCG00000013048 ENSAOCG00000013064 SCN8A (ENSAOCG00000013169) ENSAOCG00000013191 dip2ba (ENSAOCG00000013302) atf7a (ENSAOCG00000013353) asb8 (ENSAOCG00000013378) ENSAOCG00000002408 pfkma (ENSAOCG00000013524) ENSAOCG00000013555 def6a (ENSAOCG00000013606) ppardb (ENSAOCG00000000854) mkrn4 (ENSAOCG00000013661) ##22 fance (ENSAOCG00000013678) rpl10a (ENSAOCG00000013690) INAVA (ENSAOCG00000013728) zgc:195245 (ENSAOCG00000013739) ELAPOR1 (ENSAOCG00000013781) MAPK14 (ENSAOCG00000013845) srpk1a (ENSAOCG00000013884) Spiny chromis MODERN SPECIES 537 atf7a (ENSAPOG00000007234) asb8 (ENSAPOG00000007180) LARP4 (ENSAPOG00000007142) pfkma (ENSAPOG00000007052) ENSAPOG00000006389 def6a (ENSAPOG00000006367) ppardb (ENSAPOG00000006313) mkrn4 (ENSAPOG00000006267) ##22 fance (ENSAPOG00000006220) rpl10a (ENSAPOG00000006206) ENSAPOG00000006185 INAVA (ENSAPOG00000006175) zgc:195245 (ENSAPOG00000006163) ELAPOR1 (ENSAPOG00000006134) MAPK14 (ENSAPOG00000006083) srpk1a (ENSAPOG00000006062) lhfpl5b (ENSAPOG00000006023) cpne5a (ENSAPOG00000005989) dclre1b (ENSAPOG00000005892) Cichlidae ANCESTRAL SPECIES ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT01060000248949 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00990000203931 ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Midas cichlid MODERN SPECIES 814 ptges3a (ENSACIG00000000593) mipa (ENSACIG00000000627) stat6 (ENSACIG00000000828) FIGNL2 (ENSACIG00000000876) ENSACIG00000000889 SCN8A (ENSACIG00000000902) ENSACIG00000000970 ENSACIG00000000974 dip2ba (ENSACIG00000001052) atf7a (ENSACIG00000001154) asb8 (ENSACIG00000001181) LARP4 (ENSACIG00000001198) pfkma (ENSACIG00000001313) def6a (ENSACIG00000001370) ppardb (ENSACIG00000001422) mkrn4 (ENSACIG00000001902) ##22 fance (ENSACIG00000001924) rpl10a (ENSACIG00000002041) ENSACIG00000002285 zgc:195245 (ENSACIG00000002325) ENSACIG00000002379 ENSACIG00000002710 ELAPOR1 (ENSACIG00000002726) mapk14a (ENSACIG00000002827) srpk1a (ENSACIG00000003612) lhfpl5b (ENSACIG00000003808) cpne5a (ENSACIG00000003829) dclre1b (ENSACIG00000003939) adora1b (ENSACIG00000003958) mmp9 (ENSACIG00000003969) ZNF335 (ENSACIG00000004020) Pseudocrenilabrinae ANCESTRAL SPECIES 5 ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT01060000248949 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00990000203931 ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Pseudocrenilabrinae_A ANCESTRAL SPECIES 17 ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT01060000248949 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00990000203931 ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Haplochromini ANCESTRAL SPECIES 18 ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT01060000248949 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00990000203931 ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415.f ENSGT00940000158508 Haplochromini_A ANCESTRAL SPECIES 22 ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT01060000248949 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415.f ENSGT00940000158508 P. nyererei MODERN SPECIES 342 ptges3a (ENSPNYG00000021676) mipa (ENSPNYG00000021692) stat6 (ENSPNYG00000021725) FIGNL2 (ENSPNYG00000021771) ENSPNYG00000021781 SCN8A (ENSPNYG00000021794) ENSPNYG00000021924 dip2ba (ENSPNYG00000022164) atf7a (ENSPNYG00000022232) asb8 (ENSPNYG00000022250) LARP4 (ENSPNYG00000022265) pfkma (ENSPNYG00000022296) ENSPNYG00000022325 def6a (ENSPNYG00000022339) ppardb (ENSPNYG00000022354) mkrn4 (ENSPNYG00000022367) ##22 fance (ENSPNYG00000022380) rpl10a (ENSPNYG00000022401) ENSPNYG00000022411 zgc:195245 (ENSPNYG00000022421) ENSPNYG00000022436 ELAPOR1 (ENSPNYG00000022449) ENSPNYG00000022470 srpk1a (ENSPNYG00000022482) lhfpl5b (ENSPNYG00000022521) cpne5a (ENSPNYG00000022524) dclre1b (ENSPNYG00000022539) adora1b (ENSPNYG00000022543) ENSPNYG00000022548 ENSPNYG00000000687 ZNF335 (ENSPNYG00000000694) Haplochromini_B ANCESTRAL SPECIES 19 ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT01060000248949 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415.f ENSGT00940000158508 Zebra mbuna MODERN SPECIES 1103 mipa (ENSMZEG00005000282) stat6 (ENSMZEG00005000290) FIGNL2 (ENSMZEG00005000300) ENSMZEG00005000325 SCN8A (ENSMZEG00005000344) ENSMZEG00005000454 ENSMZEG00005000467 dip2ba (ENSMZEG00005001697) atf7a (ENSMZEG00005001761) asb8 (ENSMZEG00005001796) LARP4 (ENSMZEG00005001813) pfkma (ENSMZEG00005001836) ENSMZEG00005001890 def6a (ENSMZEG00005001907) ppardb (ENSMZEG00005001947) mkrn4 (ENSMZEG00005001958) ##22 fance (ENSMZEG00005001981) rpl10a (ENSMZEG00005002010) ENSMZEG00005005148 zgc:195245 (ENSMZEG00005005159) smc5 (ENSMZEG00005005223) ENSMZEG00005006271 ELAPOR1 (ENSMZEG00005006309) ENSMZEG00005006370 srpk1a (ENSMZEG00005006383) lhfpl5b (ENSMZEG00005006410) cpne5a (ENSMZEG00005006419) dclre1b (ENSMZEG00005006454) adora1b (ENSMZEG00005006459) mmp9 (ENSMZEG00005006471) ZNF335 (ENSMZEG00005006500) Eastern happy MODERN SPECIES 12 mipa (ENSACLG00000003244) stat6 (ENSACLG00000003188) FIGNL2 (ENSACLG00000003166) ENSACLG00000003150 ENSACLG00000003134 SCN8A (ENSACLG00000003058) ENSACLG00000003041 dip2ba (ENSACLG00000002735) atf7a (ENSACLG00000002649) asb8 (ENSACLG00000002619) LARP4 (ENSACLG00000002575) pfkma (ENSACLG00000002537) ENSACLG00000002524 def6a (ENSACLG00000002441) ppardb (ENSACLG00000002389) mkrn4 (ENSACLG00000002368) ##22 fance (ENSACLG00000002359) rpl10a (ENSACLG00000002350) ENSACLG00000002342 ENSACLG00000002327 zgc:195245 (ENSACLG00000002310) ENSACLG00000002279 ENSACLG00000002254 ELAPOR1 (ENSACLG00000002236) MAPK14 (ENSACLG00000002174) srpk1a (ENSACLG00000002140) lhfpl5b (ENSACLG00000002097) cpne5a (ENSACLG00000001979) dclre1b (ENSACLG00000001963) adora1b (ENSACLG00000001934) mmp9 (ENSACLG00000001873) Burton s mouthbrooder MODERN SPECIES 277 mipa (ENSHBUG00000023441) stat6 (ENSHBUG00000023428) FIGNL2 (ENSHBUG00000023403) ENSHBUG00000023393 SCN8A (ENSHBUG00000023371) ENSHBUG00000023238 ENSHBUG00000023225 dip2ba (ENSHBUG00000023211) atf7a (ENSHBUG00000023116) asb8 (ENSHBUG00000023091) LARP4 (ENSHBUG00000023074) pfkma (ENSHBUG00000022945) ENSHBUG00000022850 def6a (ENSHBUG00000000701) ppardb (ENSHBUG00000022834) mkrn4 (ENSHBUG00000022825) ##22 fance (ENSHBUG00000022812) rpl10a (ENSHBUG00000022799) ENSHBUG00000022789 ENSHBUG00000022777 zgc:195245 (ENSHBUG00000022767) ENSHBUG00000022745 ENSHBUG00000022727 ELAPOR1 (ENSHBUG00000022700) MAPK14 (ENSHBUG00000022694) srpk1a (ENSHBUG00000022676) lhfpl5b (ENSHBUG00000022649) cpne5a (ENSHBUG00000000695) dclre1b (ENSHBUG00000000905) adora1b (ENSHBUG00000022466) mmp9 (ENSHBUG00000022457) Lyretail cichlid MODERN SPECIES 298 stat6 (ENSNBRG00000014356) FIGNL2 (ENSNBRG00000014322) ENSNBRG00000014317 ENSNBRG00000014309 SCN8A (ENSNBRG00000012055) ENSNBRG00000011515 dip2ba (ENSNBRG00000011401) atf7a (ENSNBRG00000011346) asb8 (ENSNBRG00000011324) LARP4 (ENSNBRG00000011292) ENSNBRG00000011260 ENSNBRG00000011230 ENSNBRG00000011193 def6a (ENSNBRG00000011063) ppardb (ENSNBRG00000011001) mkrn4 (ENSNBRG00000010946) ##22 ENSNBRG00000010938 ENSNBRG00000010916 rpl10a (ENSNBRG00000010890) zgc:195245 (ENSNBRG00000010878) ENSNBRG00000010855 ENSNBRG00000010547 ELAPOR1 (ENSNBRG00000010406) MAPK14 (ENSNBRG00000009498) srpk1a (ENSNBRG00000009235) lhfpl5b (ENSNBRG00000009219) cpne5a (ENSNBRG00000009118) dclre1b (ENSNBRG00000009095) adora1b (ENSNBRG00000009081) ENSNBRG00000009071 ENSNBRG00000009059 Nile tilapia DUPLICATION Nile tilapia MODERN SPECIES 490 ENSONIG00000032884 ##22 Nile tilapia MODERN SPECIES 12 mipa (ENSONIG00000011938) stat6 (ENSONIG00000011930) FIGNL2 (ENSONIG00000035582) ENSONIG00000027112 SCN8A (ENSONIG00000011915) ENSONIG00000028126 ENSONIG00000011914 dip2ba (ENSONIG00000011909) atf7a (ENSONIG00000011905) asb8 (ENSONIG00000034107) LARP4 (ENSONIG00000011895) pfkma (ENSONIG00000011877) ENSONIG00000023947 def6a (ENSONIG00000011876) ppard (ENSONIG00000011871) mkrn4 (ENSONIG00000011870) ##22 fance (ENSONIG00000011869) rpl10a (ENSONIG00000011864) ENSONIG00000011863 ENSONIG00000011861 zgc:195245 (ENSONIG00000011860) ENSONIG00000011853 lg20h1orf194 (ENSONIG00000036001) ELAPOR1 (ENSONIG00000011847) MAPK14 (ENSONIG00000011834) srpk1a (ENSONIG00000011833) lhfpl5b (ENSONIG00000034910) CPNE5 (ENSONIG00000011820) dclre1b (ENSONIG00000029854) adora1b (ENSONIG00000028739) mmp9 (ENSONIG00000011812) Percomorphaceae_C ANCESTRAL SPECIES 4 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00950000183290 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 Percomorphaceae_D ANCESTRAL SPECIES 4 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00950000183290 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00990000203931 ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 Anabantaria ANCESTRAL SPECIES 3 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00950000183290 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Anabantoidei ANCESTRAL SPECIES 2 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00950000183290 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Climbing perch MODERN SPECIES 20 mipa (ENSATEG00000021018) stat6 (ENSATEG00000020969) ENSATEG00000026780 ENSATEG00000020946 ENSATEG00000027582 ENSATEG00000020885 ENSATEG00000020867 dip2ba (ENSATEG00000020804) atf7a (ENSATEG00000020751) asb8 (ENSATEG00000026798) ENSATEG00000020715 pfkma (ENSATEG00000020657) ENSATEG00000020608 DEF6 (ENSATEG00000020588) ppardb (ENSATEG00000020562) mkrn4 (ENSATEG00000020555) ##22 fance (ENSATEG00000020500) rpl10a (ENSATEG00000020485) ENSATEG00000020469 zgc:195245 (ENSATEG00000025255) ENSATEG00000020410 ENSATEG00000020399 ENSATEG00000020380 srpk1a (ENSATEG00000020317) lhfpl5b (ENSATEG00000028783) cpne5a (ENSATEG00000020240) dclre1b (ENSATEG00000020224) ENSATEG00000020216 mmp9 (ENSATEG00000020195) ENSATEG00000020172 ENSATEG00000019547 Zig-zag eel MODERN SPECIES 21 grm6a (ENSMAMG00000011504) ENSMAMG00000011498 ENSMAMG00000011460 ENSMAMG00000011416 ENSMAMG00000025721 ENSMAMG00000011361 ENSMAMG00000011315 dip2ba (ENSMAMG00000011261) atf7a (ENSMAMG00000011234) asb8 (ENSMAMG00000027831) ENSMAMG00000011206 pfkma (ENSMAMG00000011141) ENSMAMG00000011104 DEF6 (ENSMAMG00000011078) ppardb (ENSMAMG00000011065) mkrn4 (ENSMAMG00000011051) ##22 fance (ENSMAMG00000011012) rpl10a (ENSMAMG00000011005) ENSMAMG00000010982 zgc:195245 (ENSMAMG00000010967) ENSMAMG00000010953 ENSMAMG00000010939 ENSMAMG00000010913 ENSMAMG00000010909 srpk1a (ENSMAMG00000010877) lhfpl5b (ENSMAMG00000010867) cpne5a (ENSMAMG00000010842) dclre1b (ENSMAMG00000010837) ENSMAMG00000010827 mmp9 (ENSMAMG00000010804) ENSMAMG00000010775 Carangaria ANCESTRAL SPECIES 2 ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00950000183290 ENSGT00940000156263.k ENSGT00940000162777 ENSGT00940000162430 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00990000203931 ENSGT00940000173571 ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 Carangaria_A ANCESTRAL SPECIES 1 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00950000183290 ENSGT00940000156263.k ENSGT00940000162430 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00990000203931 ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Seriola ANCESTRAL SPECIES 8 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00950000183290 ENSGT00940000156263.k ENSGT00940000162430 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00990000203931 ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Yellowtail amberjack MODERN SPECIES 3155 mipa (ENSSLDG00000005389) stat6 (ENSSLDG00000005356) FIGNL2 (ENSSLDG00000005337) ENSSLDG00000005327 SCN8A (ENSSLDG00000005220) ENSSLDG00000005176 dip2ba (ENSSLDG00000005115) ENSSLDG00000005077 atf7a (ENSSLDG00000005028) asb8 (ENSSLDG00000004994) ENSSLDG00000004942 pfkma (ENSSLDG00000004828) ENSSLDG00000004791 def6a (ENSSLDG00000004712) ppardb (ENSSLDG00000004607) mkrn4 (ENSSLDG00000004587) ##22 fance (ENSSLDG00000004550) rpl10a (ENSSLDG00000004242) ENSSLDG00000004211 ENSSLDG00000004179 zgc:195245 (ENSSLDG00000004088) ENSSLDG00000004041 ENSSLDG00000004012 ELAPOR1 (ENSSLDG00000003995) ENSSLDG00000003466 srpk1a (ENSSLDG00000003366) lhfpl5b (ENSSLDG00000003336) ENSSLDG00000003312 cpne5a (ENSSLDG00000003151) dclre1b (ENSSLDG00000003115) adora1b (ENSSLDG00000003092) Greater amberjack MODERN SPECIES 23 ptges3a (ENSSDUG00000011203) mipa (ENSSDUG00000011093) stat6 (ENSSDUG00000011054) FIGNL2 (ENSSDUG00000011041) ENSSDUG00000011028 ENSSDUG00000011020 SCN8A (ENSSDUG00000010971) ENSSDUG00000010896 dip2ba (ENSSDUG00000010745) atf7a (ENSSDUG00000010687) asb8 (ENSSDUG00000010667) LARP4 (ENSSDUG00000010621) pfkma (ENSSDUG00000010580) def6a (ENSSDUG00000010519) ppardb (ENSSDUG00000010478) mkrn4 (ENSSDUG00000010454) ##22 fance (ENSSDUG00000010430) rpl10a (ENSSDUG00000010399) ENSSDUG00000010379 zgc:195245 (ENSSDUG00000010356) ENSSDUG00000010320 ENSSDUG00000010308 ELAPOR1 (ENSSDUG00000010265) mapk14a (ENSSDUG00000010228) srpk1a (ENSSDUG00000010159) lhfpl5b (ENSSDUG00000010145) cpne5a (ENSSDUG00000010097) dclre1b (ENSSDUG00000010085) adora1b (ENSSDUG00000010070) mmp9 (ENSSDUG00000010010) ZNF335 (ENSSDUG00000009971) Barramundi perch MODERN SPECIES 102 ptges3a (ENSLCAG00010018353) mipa (ENSLCAG00010018348) stat6 (ENSLCAG00010018342) FIGNL2 (ENSLCAG00010018331) ENSLCAG00010018329 ENSLCAG00010018327 SCN8A (ENSLCAG00010012545) ENSLCAG00010011169 dip2ba (ENSLCAG00010008981) atf7a (ENSLCAG00010008539) asb8 (ENSLCAG00010008530) LARP4 (ENSLCAG00010008525) pfkma (ENSLCAG00010007566) def6a (ENSLCAG00010007318) ppardb (ENSLCAG00010007269) mkrn4 (ENSLCAG00010007252) ##22 fance (ENSLCAG00010007245) rpl10a (ENSLCAG00010007225) ENSLCAG00010007202 zgc:195245 (ENSLCAG00010007192) ENSLCAG00010007065 ELAPOR1 (ENSLCAG00010006988) mapk14a (ENSLCAG00010006895) srpk1a (ENSLCAG00010006843) lhfpl5b (ENSLCAG00010006826) cpne5a (ENSLCAG00010006766) ENSLCAG00010006715 dclre1b (ENSLCAG00010006713) adora1b (ENSLCAG00010006710) mmp9 (ENSLCAG00010006164) ZNF335 (ENSLCAG00010006065) Pleuronectoidei ANCESTRAL SPECIES 14 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00950000183290 ENSGT00940000156263.k ENSGT00940000162777 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00990000203931 ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 Tongue sole MODERN SPECIES 1 ENSCSEG00000002214 CACNA2D3 (ENSCSEG00000002114) mipa (ENSCSEG00000002103) stat6 (ENSCSEG00000002093) FIGNL2 (ENSCSEG00000002088) ENSCSEG00000002083 SCN8A (ENSCSEG00000002058) dip2ba (ENSCSEG00000001989) atf7a (ENSCSEG00000001982) asb8 (ENSCSEG00000001979) LARP4 (ENSCSEG00000001963) pfkma (ENSCSEG00000001938) ENSCSEG00000001930 def6a (ENSCSEG00000001910) ppardb (ENSCSEG00000001902) mkrn4 (ENSCSEG00000001896) ##22 fance (ENSCSEG00000001892) rpl10a (ENSCSEG00000001886) ENSCSEG00000001882 ENSCSEG00000001873 zgc:195245 (ENSCSEG00000001863) ENSCSEG00000001847 ENSCSEG00000001840 smc5 (ENSCSEG00000001789) ELAPOR1 (ENSCSEG00000001777) MAPK14 (ENSCSEG00000001770) srpk1a (ENSCSEG00000001752) lhfpl5b (ENSCSEG00000001747) cpne5a (ENSCSEG00000001725) dclre1b (ENSCSEG00000001718) adora1b (ENSCSEG00000001717) Turbot MODERN SPECIES 2 mipa (ENSSMAG00000027989) stat6 (ENSSMAG00000019671) ENSSMAG00000029304 ENSSMAG00000019660 ENSSMAG00000019657 ENSSMAG00000019612 ENSSMAG00000019581 dip2ba (ENSSMAG00000019523) atf7a (ENSSMAG00000019511) asb8 (ENSSMAG00000019500) ENSSMAG00000019473 pfkma (ENSSMAG00000019425) ENSSMAG00000019407 DEF6 (ENSSMAG00000019391) ppardb (ENSSMAG00000019375) mkrn4 (ENSSMAG00000019369) ##22 fance (ENSSMAG00000019359) rpl10a (ENSSMAG00000019351) ENSSMAG00000019340 zgc:195245 (ENSSMAG00000019329) ENSSMAG00000019316 si:ch211-163l21.7 (ENSSMAG00000019310) ENSSMAG00000019290 ENSSMAG00000019276 srpk1a (ENSSMAG00000019272) lhfpl5b (ENSSMAG00000019265) cpne5a (ENSSMAG00000019197) dclre1b (ENSSMAG00000036753) ENSSMAG00000019185 mmp9 (ENSSMAG00000019171) ENSSMAG00000019162 Eupercaria ANCESTRAL SPECIES 4 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 Tetraodontidae DUPLICATION Tetraodontidae ANCESTRAL SPECIES 2 ENSGT00940000161404 ENSGT00940000154256.`c ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b.m ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Tetraodon MODERN SPECIES 24 CACNB3 (ENSTNIG00000015098) rnd1b (ENSTNIG00000015099) dtx3 (ENSTNIG00000015100) ptges3a (ENSTNIG00000015101) mipa (ENSTNIG00000015102) stat6 (ENSTNIG00000015103) FIGNL2 (ENSTNIG00000015104) SCN8A (ENSTNIG00000015105) dip2ba (ENSTNIG00000015106) atf7a (ENSTNIG00000015107) asb8 (ENSTNIG00000015108) ENSTNIG00000015109 pfkma (ENSTNIG00000015110) def6a (ENSTNIG00000015111) ppardb (ENSTNIG00000015112) ENSTNIG00000001133 ##22 fance (ENSTNIG00000015113) rpl10a (ENSTNIG00000001264) ENSTNIG00000001982 ENSTNIG00000015114 zgc:195245 (ENSTNIG00000015115) smc5 (ENSTNIG00000015116) ELAPOR1 (ENSTNIG00000015117) ENSTNIG00000015118 srpk1a (ENSTNIG00000015119) lhfpl5b (ENSTNIG00000015120) cpne5a (ENSTNIG00000015121) dclre1b (ENSTNIG00000015122) adora1b (ENSTNIG00000015123) mmp9 (ENSTNIG00000015124) ZNF335 (ENSTNIG00000015125) Fugu MODERN SPECIES 15 rnd1b (ENSTRUG00000028801) ENSTRUG00000025546 dtx3 (ENSTRUG00000015669) ptges3a (ENSTRUG00000015676) mipa (ENSTRUG00000027356) stat6 (ENSTRUG00000015703) FIGNL2 (ENSTRUG00000015713) ENSTRUG00000030086 SCN8A (ENSTRUG00000015715) dip2ba (ENSTRUG00000015870) atf7a (ENSTRUG00000015923) ENSTRUG00000015939 ENSTRUG00000021701 def6a (ENSTRUG00000016125) ppardb (ENSTRUG00000016146) mkrn4 (ENSTRUG00000025139) ##22 fance (ENSTRUG00000016161) rpl10a (ENSTRUG00000016168) ENSTRUG00000016183 zgc:195245 (ENSTRUG00000016189) smc5 (ENSTRUG00000016193) ENSTRUG00000021751 ELAPOR1 (ENSTRUG00000032645) ENSTRUG00000016218 srpk1a (ENSTRUG00000016288) lhfpl5b (ENSTRUG00000016319) cpne5a (ENSTRUG00000016323) dclre1b (ENSTRUG00000025152) adora1b (ENSTRUG00000016343) mmp9 (ENSTRUG00000000827) ZNF335 (ENSTRUG00000001322) Tetraodontidae ANCESTRAL SPECIES ENSGT00950000183077.b.n ##22 Fugu DUPLICATION Fugu MODERN SPECIES 15 ENSTRUG00000015854 kif5aa (ENSTRUG00000015920) ENSTRUG00000021969 stac3 (ENSTRUG00000016021) SHMT2 (ENSTRUG00000002985) NDUFA4L2 (ENSTRUG00000026425) actr5 (ENSTRUG00000003498) SLC32A1 (ENSTRUG00000003882) ENSTRUG00000003950 PRELID3B (ENSTRUG00000004256) atp5f1e (ENSTRUG00000030210) ENSTRUG00000021915 GNAS (ENSTRUG00000005203) vapb (ENSTRUG00000031875) chmp4bb (ENSTRUG00000030351) ENSTRUG00000028016 ##22 eif2s2 (ENSTRUG00000002676) srsf6a (ENSTRUG00000021397) L3MBTL1 (ENSTRUG00000032130) sgk2a (ENSTRUG00000009295) ENSTRUG00000020421 ENSTRUG00000031047 nsun5 (ENSTRUG00000017748) TKT (ENSTRUG00000017734) dcp1a (ENSTRUG00000003429) CACNA1D (ENSTRUG00000003936) CHDH (ENSTRUG00000006018) actr8 (ENSTRUG00000006146) selenok (ENSTRUG00000006561) sema3bl (ENSTRUG00000006572) sema3b (ENSTRUG00000007631) Fugu MODERN SPECIES 20 zgc:162171 (ENSTRUG00000004036) ENSTRUG00000004246 ENSTRUG00000002169 ENSTRUG00000028480 zgc:109889 (ENSTRUG00000030080) htr2cl1 (ENSTRUG00000005007) ENSTRUG00000024753 ccnb3 (ENSTRUG00000005623) tnfsf10l (ENSTRUG00000005871) CLCN5 (ENSTRUG00000005959) ENSTRUG00000033143 ENSTRUG00000020248 ENSTRUG00000030736 ENSTRUG00000023198 ENSTRUG00000007175 ENSTRUG00000028757 ##22 hdac8 (ENSTRUG00000025628) cited1 (ENSTRUG00000023697) rps4x (ENSTRUG00000008109) ENSTRUG00000008446 ENSTRUG00000008226 arhgap36 (ENSTRUG00000008457) ENSTRUG00000008490 rasl11a (ENSTRUG00000008651) gc2 (ENSTRUG00000008848) ENSTRUG00000022256 ENSTRUG00000030256 col4a5 (ENSTRUG00000009825) ENSTRUG00000004079 ENSTRUG00000010428 ankrd46b (ENSTRUG00000020397) Eupecaria_A ANCESTRAL SPECIES 4 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 Ballan wrasse MODERN SPECIES 302 mipa (ENSLBEG00000013589) stat6 (ENSLBEG00000013768) FIGNL2 (ENSLBEG00000013809) ENSLBEG00000013822 SCN8A (ENSLBEG00000013868) ENSLBEG00000013940 dip2ba (ENSLBEG00000014189) atf7a (ENSLBEG00000014449) ENSLBEG00000014481 asb8 (ENSLBEG00000014503) LARP4 (ENSLBEG00000014537) pfkma (ENSLBEG00000014602) ENSLBEG00000014668 def6a (ENSLBEG00000014745) ppardb (ENSLBEG00000014846) mkrn4 (ENSLBEG00000014889) ##22 fance (ENSLBEG00000014911) rpl10a (ENSLBEG00000014935) ENSLBEG00000014973 zgc:195245 (ENSLBEG00000015034) smc5 (ENSLBEG00000015116) ENSLBEG00000015190 ELAPOR1 (ENSLBEG00000015217) mapk14a (ENSLBEG00000015284) srpk1a (ENSLBEG00000015355) lhfpl5b (ENSLBEG00000015414) cpne5a (ENSLBEG00000015441) dclre1b (ENSLBEG00000015562) adora1b (ENSLBEG00000015584) mmp9 (ENSLBEG00000015615) ZNF335 (ENSLBEG00000015653) Eupecaria_B ANCESTRAL SPECIES 5 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Eupecaria_C ANCESTRAL SPECIES 5 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Eupercaria_incertae_sedis ANCESTRAL SPECIES 15 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 Large yellow croaker MODERN SPECIES 487 ptges3a (ENSLCRG00005008066) mipa (ENSLCRG00005008070) stat6 (ENSLCRG00005008075) FIGNL2 (ENSLCRG00005008080) ENSLCRG00005008083 SCN8A (ENSLCRG00005008090) ENSLCRG00005008155 dip2ba (ENSLCRG00005008246) atf7a (ENSLCRG00005017919) asb8 (ENSLCRG00005017925) LARP4 (ENSLCRG00005017927) pfkma (ENSLCRG00005017939) ENSLCRG00005018186 def6a (ENSLCRG00005018192) ppardb (ENSLCRG00005018194) mkrn4 (ENSLCRG00005018216) ##22 fance (ENSLCRG00005018217) rpl10a (ENSLCRG00005018219) ENSLCRG00005018222 zgc:195245 (ENSLCRG00005018223) smc5 (ENSLCRG00005018231) ENSLCRG00005018866 ELAPOR1 (ENSLCRG00005018893) MAPK14 (ENSLCRG00005019366) srpk1a (ENSLCRG00005019847) lhfpl5b (ENSLCRG00005019955) cpne5a (ENSLCRG00005019956) dclre1b (ENSLCRG00005019974) adora1b (ENSLCRG00005019975) mmp9 (ENSLCRG00005019979) ZNF335 (ENSLCRG00005020055) European seabass MODERN SPECIES 14 ENSDLAG00005035116 stat6 (ENSDLAG00005023192) ENSDLAG00005023318 ENSDLAG00005023324 ENSDLAG00005023343 ENSDLAG00005030218 ENSDLAG00005023671 dip2ba (ENSDLAG00005001514) atf7a (ENSDLAG00005004486) asb8 (ENSDLAG00005031286) ENSDLAG00005004625 pfkma (ENSDLAG00005005095) ENSDLAG00005013823 DEF6 (ENSDLAG00005013886) ppardb (ENSDLAG00005013901) mkrn4 (ENSDLAG00005013970) ##22 fance (ENSDLAG00005013986) rpl10a (ENSDLAG00005014033) ENSDLAG00005014062 zgc:195245 (ENSDLAG00005031211) ENSDLAG00005014120 si:ch211-163l21.7 (ENSDLAG00005015699) ENSDLAG00005015713 ENSDLAG00005015989 srpk1a (ENSDLAG00005016545) lhfpl5b (ENSDLAG00005026336) cpne5a (ENSDLAG00005018098) dclre1b (ENSDLAG00005018673) mmp9 (ENSDLAG00005018682) ENSDLAG00005018827 ENSDLAG00005018846 Gilthead seabream MODERN SPECIES 21 ptges3a (ENSSAUG00010022168) mipa (ENSSAUG00010022169) stat6 (ENSSAUG00010022172) FIGNL2 (ENSSAUG00010022180) ENSSAUG00010022181 ENSSAUG00010022198 ENSSAUG00010022966 dip2ba (ENSSAUG00010023031) atf7a (ENSSAUG00010025145) asb8 (ENSSAUG00010025148) LARP4 (ENSSAUG00010025150) pfkma (ENSSAUG00010025172) ENSSAUG00010025267 def6a (ENSSAUG00010025274) ppardb (ENSSAUG00010025277) mkrn4 (ENSSAUG00010025281) ##22 fance (ENSSAUG00010025283) rpl10a (ENSSAUG00010025284) ENSSAUG00010025285 ENSSAUG00010025286 zgc:195245 (ENSSAUG00010025287) ENSSAUG00010025297 ENSSAUG00010025645 ELAPOR1 (ENSSAUG00010025655) MAPK14 (ENSSAUG00010025761) srpk1a (ENSSAUG00010026300) lhfpl5b (ENSSAUG00010026514) cpne5a (ENSSAUG00010026515) dclre1b (ENSSAUG00010026517) adora1b (ENSSAUG00010026518) mmp9 (ENSSAUG00010026521) Perciformes ANCESTRAL SPECIES 4 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 Cottioidei ANCESTRAL SPECIES 2 ENSGT00940000154256.`c ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 ENSGT00940000158508 Lumpfish MODERN SPECIES 22 ptges3a (ENSCLMG00005021963) mipa (ENSCLMG00005021961) stat6 (ENSCLMG00005021957) FIGNL2 (ENSCLMG00005021953) ENSCLMG00005021951 SCN8A (ENSCLMG00005021937) ENSCLMG00005021932 dip2ba (ENSCLMG00005015557) atf7a (ENSCLMG00005015504) asb8 (ENSCLMG00005015503) LARP4 (ENSCLMG00005015498) pfkma (ENSCLMG00005015492) ENSCLMG00005015491 def6a (ENSCLMG00005015490) ppardb (ENSCLMG00005015442) mkrn4 (ENSCLMG00005015437) ##22 fance (ENSCLMG00005015432) rpl10a (ENSCLMG00005015428) ENSCLMG00005015425 zgc:195245 (ENSCLMG00005015424) smc5 (ENSCLMG00005011718) ENSCLMG00005011704 ELAPOR1 (ENSCLMG00005011703) MAPK14 (ENSCLMG00005011533) srpk1a (ENSCLMG00005011520) lhfpl5b (ENSCLMG00005011519) ENSCLMG00005011517 dclre1b (ENSCLMG00005011515) adora1b (ENSCLMG00005011509) mmp9 (ENSCLMG00005011431) ZNF335 (ENSCLMG00005011427) Stickleback MODERN SPECIES 11 dtx3 (ENSGACG00000008546) ptges3a (ENSGACG00000008508) mipa (ENSGACG00000008484) stat6 (ENSGACG00000008477) FIGNL2 (ENSGACG00000008474) ENSGACG00000008449 ENSGACG00000008441 dip2ba (ENSGACG00000008427) atf7a (ENSGACG00000008417) asb8 (ENSGACG00000008406) LARP4 (ENSGACG00000008381) pfkma (ENSGACG00000008357) ENSGACG00000008347 def6a (ENSGACG00000008311) ppardb (ENSGACG00000008288) mkrn4 (ENSGACG00000008285) ##22 ENSGACG00000008283 fance (ENSGACG00000008262) ENSGACG00000008244 zgc:195245 (ENSGACG00000008236) smc5 (ENSGACG00000008208) ELAPOR1 (ENSGACG00000008195) ENSGACG00000008157 srpk1a (ENSGACG00000008145) lhfpl5b (ENSGACG00000008138) cpne5a (ENSGACG00000008082) dclre1b (ENSGACG00000008079) adora1b (ENSGACG00000008072) mmp9 (ENSGACG00000008035) ZNF335 (ENSGACG00000008023) ENSGACG00000007950 Perciformes_a ANCESTRAL SPECIES 2 ENSGT00940000156260.d ENSGT01080000257420.C.b.a ENSGT00940000161971 ENSGT00940000170524 ENSGT00940000156263.k ENSGT00950000183290 ENSGT00940000165418 ENSGT00950000182997.a.b.b.b.a.b ENSGT00940000155261.a.a ENSGT00940000159366 ENSGT00940000154409.eb.a ENSGT00940000155440.c.b ENSGT00530000068920 ENSGT00950000183017.b.b.a.b.a ENSGT00940000156676.d ENSGT00950000183077.b ##22 ENSGT00390000000705 ENSGT00390000008767 ENSGT00940000154102.a.g ENSGT00390000011228.a.a ENSGT00550000074816.B ENSGT00940000173571 ENSGT01030000234625.A ENSGT00940000156861 ENSGT00940000155325.a.a.b ENSGT00940000166975 ENSGT00990000203541.a.a.b.g ENSGT00940000156194.m.a ENSGT00940000158175 ENSGT01030000234555.a.a.b.a.a.a.a ENSGT00940000157415 Channel bull blenny MODERN SPECIES 21 mipa (ENSCGOG00000016516) stat6 (ENSCGOG00000016536) ENSCGOG00000016566 ENSCGOG00000016574 SCN8A (ENSCGOG00000016731) ENSCGOG00000020935 ENSCGOG00000020937 dip2ba (ENSCGOG00000021001) atf7a (ENSCGOG00000022817) asb8 (ENSCGOG00000022819) LARP4 (ENSCGOG00000022825) pfkma (ENSCGOG00000022894) ENSCGOG00000023517 def6a (ENSCGOG00000023522) ppardb (ENSCGOG00000023560) mkrn4 (ENSCGOG00000023599) ##22 fance (ENSCGOG00000023608) rpl10a (ENSCGOG00000023617) ENSCGOG00000023625 zgc:195245 (ENSCGOG00000023626) smc5 (ENSCGOG00000023640) ENSCGOG00000023854 ELAPOR1 (ENSCGOG00000023858) MAPK14 (ENSCGOG00000023949) srpk1a (ENSCGOG00000024320) lhfpl5b (ENSCGOG00000024418) cpne5a (ENSCGOG00000024422) dclre1b (ENSCGOG00000024434) adora1b (ENSCGOG00000024435) mmp9 (ENSCGOG00000024463) ZNF335 (ENSCGOG00000024536) Pike perch DUPLICATION Pike perch MODERN SPECIES 486 ENSSLUG00000003686 ##22 ENSSLUG00000003674 Pike perch MODERN SPECIES 111 mipa (ENSSLUG00000014342) stat6 (ENSSLUG00000014360) FIGNL2 (ENSSLUG00000014393) SCN8A (ENSSLUG00000014786) ENSSLUG00000021202 ENSSLUG00000021209 dip2ba (ENSSLUG00000021314) atf7a (ENSSLUG00000022008) asb8 (ENSSLUG00000022012) LARP4 (ENSSLUG00000022026) pfkma (ENSSLUG00000022146) mrps28 (ENSSLUG00000023108) ENSSLUG00000023112 def6a (ENSSLUG00000023129) ppardb (ENSSLUG00000023151) mkrn4 (ENSSLUG00000023177) ##22 fance (ENSSLUG00000023180) rpl10a (ENSSLUG00000023183) ENSSLUG00000023186 ENSSLUG00000023189 ENSSLUG00000023199 zgc:195245 (ENSSLUG00000023206) ENSSLUG00000023211 Ciona ANCESTRAL SPECIES 1170 ENSGT00950000183077.b ##22 ENSGT00390000003937 Ciona savignyi MODERN SPECIES 121 ENSCSAVG00000005191 ENSCSAVG00000005193 ENSCSAVG00000005200 ENSCSAVG00000005206 ENSCSAVG00000005212 ENSCSAVG00000005215 ENSCSAVG00000005223 ENSCSAVG00000005238 ENSCSAVG00000005569 ENSCSAVG00000005572 ENSCSAVG00000005739 ENSCSAVG00000005946 ENSCSAVG00000005962 ENSCSAVG00000006149 ENSCSAVG00000006373 ENSCSAVG00000006377 ##22 ENSCSAVG00000006423 ENSCSAVG00000006430 ENSCSAVG00000006445 ENSCSAVG00000006486 ENSCSAVG00000006487 ENSCSAVG00000006488 ENSCSAVG00000006491 ENSCSAVG00000006493 ENSCSAVG00000006519 ENSCSAVG00000006521 ENSCSAVG00000006591 ENSCSAVG00000006594 ENSCSAVG00000006599 ENSCSAVG00000006633 ENSCSAVG00000006661 Ciona intestinalis MODERN SPECIES 11 ENSCING00000017902 ENSCING00000007173 ENSCING00000019756 ENSCING00000002334 ENSCING00000007170 ENSCING00000012488 ENSCING00000007168 ENSCING00000007174 ENSCING00000007178 ENSCING00000007177 ENSCING00000007176 ENSCING00000007175 ENSCING00000024059 ENSCING00000007191 ENSCING00000022323 ENSCING00000007190 ##22 ENSCING00000019662 ENSCING00000019067 ENSCING00000007189 ENSCING00000007187 ENSCING00000007186 ENSCING00000007185 ENSCING00000007182 ENSCING00000019617 ENSCING00000018208 ENSCING00000011908 ENSCING00000011907 ENSCING00000021551 ENSCING00000001757 ENSCING00000001755 ENSCING00000001749 Ecdysozoa ANCESTRAL SPECIES ENSGT00950000183077.b ##22 Fruitfly DUPLICATION Fruitfly DUPLICATION Fruitfly MODERN SPECIES 18 CG11307 (FBgn0037106) S1P (FBgn0037105) TfAP-2 (FBgn0261953) EMC10 (FBgn0052441) SMC5 (FBgn0052438) CRIF (FBgn0037102) CG7634 (FBgn0037101) CapaR (FBgn0037100) CG7173 (FBgn0037099) Wnk (FBgn0037098) CG33290 (FBgn0053290) VhaM9.7-b (FBgn0028663) COX8 (FBgn0263911) Rpn10 (FBgn0015283) ppk5 (FBgn0053289) Mkrn1 (FBgn0029152) ##22 Arv1 (FBgn0052442) CG7611 (FBgn0037094) Cdk12 (FBgn0037093) SAK (FBgn0026371) M6 (FBgn0037092) Est-Q (FBgn0037090) Glg1 (FBgn0264561) Hr78 (FBgn0015239) CG7519 (FBgn0037087) CG7202 (FBgn0037086) Neu2 (FBgn0037085) croc (FBgn0014143) Syx7 (FBgn0267849) Alp1 (FBgn0283479) CG5664 (FBgn0037082) Fruitfly MODERN SPECIES 18 Blos3 (FBgn0085284) Rad9 (FBgn0025807) Grx1 (FBgn0036820) Dysb (FBgn0036819) CG14074 (FBgn0036818) CG6865 (FBgn0036817) Indy (FBgn0036816) Cat (FBgn0000261) HipHop (FBgn0036815) CG14073 (FBgn0036814) ftz-f1 (FBgn0001078) Atg3 (FBgn0036813) Nufip (FBgn0036812) MED11 (FBgn0036811) CG6885 (FBgn0036810) CG12477 (FBgn0036809) ##22 Dic4 (FBgn0036808) CG6893 (FBgn0036807) Cyp12c1 (FBgn0036806) Chmp1 (FBgn0036805) CG32202 (FBgn0052202) Sgf11 (FBgn0036804) GNBP1 (FBgn0040323) GNBP2 (FBgn0040322) Capr (FBgn0042134) CG42495 (FBgn0260027) MYPT-75D (FBgn0036801) bora (FBgn0259791) not (FBgn0013717) CG32199 (FBgn0052199) CG32201 (FBgn0052201) Fruitfly DUPLICATION Fruitfly MODERN SPECIES 26 betaNACtes3 (FBgn0052601) betaNACtes4 (FBgn0030566) CG9411 (FBgn0030569) CG12540 (FBgn0030570) CG14414 (FBgn0030571) mRpS25 (FBgn0030572) nmdyn-D6 (FBgn0030573) sbm (FBgn0030574) NetA (FBgn0015773) CG5321 (FBgn0030575) NetB (FBgn0015774) CG43088 (FBgn0262534) hog (FBgn0266710) CG15890 (FBgn0030576) CG5334 (FBgn0030577) ##22 CG5347 (FBgn0030578) ##22 Ag5r2 (FBgn0020508) Ag5r (FBgn0015010) rut (FBgn0003301) CG14408 (FBgn0030581) CG14411 (FBgn0030582) CG14410 (FBgn0030583) Grx5 (FBgn0030584) CG32590 (FBgn0052590) Flo2 (FBgn0264078) CG12539 (FBgn0030586) CG9522 (FBgn0030587) CG9521 (FBgn0030588) CG9519 (FBgn0030589) CG46399 (FBgn0286877) CG9518 (FBgn0030590) Fruitfly MODERN SPECIES 26 dpr8 (FBgn0052600) betaNACtes3 (FBgn0052601) betaNACtes4 (FBgn0030566) CG9411 (FBgn0030569) CG12540 (FBgn0030570) CG14414 (FBgn0030571) mRpS25 (FBgn0030572) nmdyn-D6 (FBgn0030573) sbm (FBgn0030574) NetA (FBgn0015773) CG5321 (FBgn0030575) NetB (FBgn0015774) CG43088 (FBgn0262534) hog (FBgn0266710) CG15890 (FBgn0030576) CG5334 (FBgn0030577) ##22 CG5347 (FBgn0030578) ##22 Ag5r2 (FBgn0020508) Ag5r (FBgn0015010) rut (FBgn0003301) CG14408 (FBgn0030581) CG14411 (FBgn0030582) CG14410 (FBgn0030583) Grx5 (FBgn0030584) CG32590 (FBgn0052590) Flo2 (FBgn0264078) CG12539 (FBgn0030586) CG9522 (FBgn0030587) CG9521 (FBgn0030588) CG9519 (FBgn0030589) CG46399 (FBgn0286877) Caenorhabditis elegans MODERN SPECIES 3 fbxc-9 (WBGene00045301) fbxc-2 (WBGene00016648) fbxc-10 (WBGene00045300) fbxc-4 (WBGene00016647) fbxc-11 (WBGene00045299) fbxc-5 (WBGene00016646) fbxc-12 (WBGene00045298) fbxc-3 (WBGene00019073) fbxc-8 (WBGene00019072) F58H7.5 (WBGene00019070) lgc-30 (WBGene00019069) F58H7.1 (WBGene00019067) faah-3 (WBGene00019068) plx-1 (WBGene00004047) egrh-2 (WBGene00043705) lep-2 (WBGene00002278) ##22 Y55F3AM.5 (WBGene00021923) immp-2 (WBGene00021925) Y55F3AM.9 (WBGene00021926) atg-3 (WBGene00021922) rbm-39 (WBGene00021921) abhd-14 (WBGene00021927) Y55F3AM.11 (WBGene00021928) srx-12 (WBGene00005903) Y55F3AM.21 (WBGene00219399) dcap-1 (WBGene00021929) Y55F3AM.13 (WBGene00021930) mrps-25 (WBGene00021920) znf-782 (WBGene00021931) csn-4 (WBGene00000816) cct-8 (WBGene00021934)