Sarcopterygii ANCESTRAL SPECIES 6 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000154527.b ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 Tetrapoda ANCESTRAL SPECIES 14 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000162955 Amniota ANCESTRAL SPECIES 22 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109 ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 Mammalia ANCESTRAL SPECIES 18 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A.f ENSGT00950000183041.A.e ENSGT00390000014109 ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 Theria ANCESTRAL SPECIES 28 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973 #26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Eutheria ANCESTRAL SPECIES 14 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00940000153973.c.a.b.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00940000153973.c.a.b.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT00930000152979 ENSGT00940000175447 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 Primates ANCESTRAL SPECIES 1 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00940000153973.c.a.b.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Bushbaby MODERN SPECIES 216 HRH1 (ENSOGAG00000016172) #11 ATG7 (ENSOGAG00000016175) #12 VGLL4 (ENSOGAG00000016184) #13 TAMM41 (ENSOGAG00000030657) #14 ENSOGAG00000031076 #15 ENSOGAG00000006595 #16 TIMP4 (ENSOGAG00000016704) #17 SYN2 (ENSOGAG00000016700) #18 PPARG (ENSOGAG00000002971) #19 ENSOGAG00000002976 #20 MKRN2OS (ENSOGAG00000031425) #21 MKRN2 (ENSOGAG00000003255) #22 RAF1 (ENSOGAG00000003256) #23 TMEM40 (ENSOGAG00000003261) #24 CAND2 (ENSOGAG00000028928) #25 RPL32 (ENSOGAG00000028498) #26 ENSOGAG00000010234 #27 MBD4 (ENSOGAG00000010236) #28 IFT122 (ENSOGAG00000010245) #29 RHO (ENSOGAG00000010259) #30 PLXND1 (ENSOGAG00000010266) #31 ENSOGAG00000032612 #32 TMCC1 (ENSOGAG00000010283) #33 ENSOGAG00000031381 #34 TRH (ENSOGAG00000017199) #35 RBSN (ENSOGAG00000014042) #36 MRPS25 (ENSOGAG00000014041) #37 Lemuriformes ANCESTRAL SPECIES 76 ENSGT00940000156915 ENSGT00940000157312 ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 Mouse lemur MODERN SPECIES 15 IQSEC1 (ENSMICG00000002633) ACAD9 (ENSMICG00000007418) ATP2B2 (ENSMICG00000002406) SLC6A11 (ENSMICG00000033698) SLC6A1 (ENSMICG00000003055) ATG7 (ENSMICG00000016547) #12 ENSMICG00000035458 VGLL4 (ENSMICG00000016559) #13 TAMM41 (ENSMICG00000016586) #14 ENSMICG00000012731 SYN2 (ENSMICG00000003565) #18 TIMP4 (ENSMICG00000045817) #17 PPARG (ENSMICG00000016663) #19 TSEN2 (ENSMICG00000016672) #20 MKRN2OS (ENSMICG00000038087) #21 MKRN2 (ENSMICG00000012164) #22 RAF1 (ENSMICG00000012172) #23 ENSMICG00000033639 TMEM40 (ENSMICG00000003715) #24 CAND2 (ENSMICG00000041434) #25 ENSMICG00000034607 ##26 EFCAB12 (ENSMICG00000008010) #27 MBD4 (ENSMICG00000008022) #28 IFT122 (ENSMICG00000008033) #29 RHO (ENSMICG00000047910) #30 H1-8 (ENSMICG00000030377) PLXND1 (ENSMICG00000008079) #31 ENSMICG00000028823 MSX2 (ENSMICG00000026941) NSG2 (ENSMICG00000035993) C5orf47 (ENSMICG00000047468) Lemuriformes_a ANCESTRAL SPECIES 162 ENSGT00940000156915 ENSGT00940000157312 ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 Coquerels sifaka MODERN SPECIES 614 ENSPCOG00000026952 IQSEC1 (ENSPCOG00000022781) ACAD9 (ENSPCOG00000028509) ENSPCOG00000027035 ATP2B2 (ENSPCOG00000022973) SLC6A11 (ENSPCOG00000012550) SLC6A1 (ENSPCOG00000027376) ATG7 (ENSPCOG00000021597) #12 VGLL4 (ENSPCOG00000016845) #13 TAMM41 (ENSPCOG00000021554) #14 TIMP4 (ENSPCOG00000025232) #17 SYN2 (ENSPCOG00000020181) #18 PPARG (ENSPCOG00000017510) #19 TSEN2 (ENSPCOG00000019328) #20 MKRN2OS (ENSPCOG00000027519) #21 MKRN2 (ENSPCOG00000013481) #22 RAF1 (ENSPCOG00000013436) #23 ENSPCOG00000024646 TMEM40 (ENSPCOG00000027785) #24 CAND2 (ENSPCOG00000020368) #25 ENSPCOG00000026378 ##26 EFCAB12 (ENSPCOG00000020532) #27 ENSPCOG00000018583 #28 IFT122 (ENSPCOG00000023934) #29 RHO (ENSPCOG00000024236) #30 H1-8 (ENSPCOG00000024479) PLXND1 (ENSPCOG00000027312) #31 Greater bamboo lemur MODERN SPECIES 130 SLC6A11 (ENSPSMG00000025382) SLC6A1 (ENSPSMG00000025445) HRH1 (ENSPSMG00000000102) #11 ATG7 (ENSPSMG00000000247) #12 VGLL4 (ENSPSMG00000000320) #13 TAMM41 (ENSPSMG00000000346) #14 SYN2 (ENSPSMG00000000398) #18 TIMP4 (ENSPSMG00000000419) #17 PPARG (ENSPSMG00000000463) #19 TSEN2 (ENSPSMG00000000537) #20 MKRN2OS (ENSPSMG00000000584) #21 MKRN2 (ENSPSMG00000000636) #22 RAF1 (ENSPSMG00000000725) #23 TMEM40 (ENSPSMG00000000837) #24 ENSPSMG00000000888 CAND2 (ENSPSMG00000000926) #25 ENSPSMG00000000953 ##26 EFCAB12 (ENSPSMG00000000969) #27 MBD4 (ENSPSMG00000001016) #28 IFT122 (ENSPSMG00000001543) #29 RHO (ENSPSMG00000002457) #30 H1-8 (ENSPSMG00000002466) ENSPSMG00000002470 #31 Haplorrhini ANCESTRAL SPECIES 5 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 Tarsier MODERN SPECIES 5029 PM20D2 (ENSTSYG00000027051) GABRR1 (ENSTSYG00000033942) PPARG (ENSTSYG00000006950) #19 TSEN2 (ENSTSYG00000010816) #20 MKRN2OS (ENSTSYG00000029616) #21 ENSTSYG00000030920 MKRN2 (ENSTSYG00000007429) #22 RAF1 (ENSTSYG00000007438) #23 Simiiformes ANCESTRAL SPECIES 1 ENSGT00390000004064 ENSGT00940000153393.B.v ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00940000153973.c.a.b.b ##26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000013132 ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 Catarrhini ANCESTRAL SPECIES 2 ENSGT00940000153393.B.v ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00390000016970.h ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00940000153973.c.a.b.b ##26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 Hominoidea ANCESTRAL SPECIES 2 ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.a.c ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00390000016970.h ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266.a #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a.d ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583.i Gibbon MODERN SPECIES 13 SEC13 (ENSNLEG00000004482) ENSNLEG00000026798 SLC6A11 (ENSNLEG00000004525) SLC6A1 (ENSNLEG00000026605) ENSNLEG00000030870 HRH1 (ENSNLEG00000018917) #11 ATG7 (ENSNLEG00000027005) #12 VGLL4 (ENSNLEG00000004535) #13 ENSNLEG00000004559 #14 TIMP4 (ENSNLEG00000004638) #17 ENSNLEG00000004578 #18 ENSNLEG00000029797 PPARG (ENSNLEG00000004650) #19 TSEN2 (ENSNLEG00000004696) #20 MKRN2OS (ENSNLEG00000030256) #21 MKRN2 (ENSNLEG00000004711) #22 RAF1 (ENSNLEG00000004732) #23 TMEM40 (ENSNLEG00000004755) #24 CAND2 (ENSNLEG00000004774) #25 ENSNLEG00000035616 ##26 ENSNLEG00000004798 IQSEC1 (ENSNLEG00000004793) NUP210 (ENSNLEG00000004799) HDAC11 (ENSNLEG00000004853) FBLN2 (ENSNLEG00000004881) ENSNLEG00000004941 CHCHD4 (ENSNLEG00000029809) TMEM43 (ENSNLEG00000004956) XPC (ENSNLEG00000005000) LSM3 (ENSNLEG00000005079) SLC6A6 (ENSNLEG00000005084) Hominidae ANCESTRAL SPECIES 2 ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.a.c ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00390000016970.h ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266.a #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a.d ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583.i Orangutan MODERN SPECIES 16 CLDND1 (ENSPPYG00000013614) OR5K2 (ENSPPYG00000013615) OR5K1 (ENSPPYG00000013616) ENSPPYG00000013618 GABRR3 (ENSPPYG00000013620) RIOX2 (ENSPPYG00000013621) CRYBG3 (ENSPPYG00000033155) ARL6 (ENSPPYG00000013623) EPHA6 (ENSPPYG00000013624) ENSPPYG00000013626 NSUN3 (ENSPPYG00000037583) DHFR2 (ENSPPYG00000013628) ARL13B (ENSPPYG00000013629) STX19 (ENSPPYG00000013630) ENSPPYG00000013631 MKRN2 (ENSPPYG00000013387) #22 RAF1 (ENSPPYG00000013388) #23 TMEM40 (ENSPPYG00000013389) #24 CAND2 (ENSPPYG00000013390) #25 ENSPPYG00000037343 ##26 IQSEC1 (ENSPPYG00000013393) NUP210 (ENSPPYG00000013394) HDAC11 (ENSPPYG00000013395) FBLN2 (ENSPPYG00000013396) WNT7A (ENSPPYG00000013397) CHCHD4 (ENSPPYG00000025890) TMEM43 (ENSPPYG00000013400) XPC (ENSPPYG00000013401) LSM3 (ENSPPYG00000013402) SLC6A6 (ENSPPYG00000013403) GRIP2 (ENSPPYG00000013404) Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.a.c ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00390000016970.h ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266.a #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00940000153309.c.a.e.b ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b ##26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a.d ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 Gorilla MODERN SPECIES 16 SLC6A11 (ENSGGOG00000000379) SLC6A1 (ENSGGOG00000000382) ENSGGOG00000016573 HRH1 (ENSGGOG00000038168) #11 ATG7 (ENSGGOG00000003493) #12 VGLL4 (ENSGGOG00000003500) #13 ENSGGOG00000039682 #14 SYN2 (ENSGGOG00000009751) #18 TIMP4 (ENSGGOG00000009761) #17 ENSGGOG00000038254 ENSGGOG00000038928 ENSGGOG00000043543 PPARG (ENSGGOG00000013117) #19 TSEN2 (ENSGGOG00000012488) #20 ENSGGOG00000041526 #21 MKRN2 (ENSGGOG00000000429) #22 RAF1 (ENSGGOG00000023025) #23 TMEM40 (ENSGGOG00000028438) #24 ENSGGOG00000021954 CAND2 (ENSGGOG00000001004) #25 RPL32 (ENSGGOG00000043568) #26 IQSEC1 (ENSGGOG00000001008) NUP210 (ENSGGOG00000015096) HDAC11 (ENSGGOG00000007735) FBLN2 (ENSGGOG00000011561) ENSGGOG00000042871 WNT7A (ENSGGOG00000012654) CHCHD4 (ENSGGOG00000024077) TMEM43 (ENSGGOG00000016577) XPC (ENSGGOG00000009997) LSM3 (ENSGGOG00000010006) Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.a.c ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00390000016970.h ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266.a #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00940000153309.c.a.e.b ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b ##26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000013132.q.a.d ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583.i Human MODERN SPECIES 15 ENSG00000289763 GHRL (ENSG00000157017) SEC13 (ENSG00000157020) ATP2B2 (ENSG00000157087) SLC6A11 (ENSG00000132164) SLC6A1 (ENSG00000157103) HRH1 (ENSG00000196639) #11 ATG7 (ENSG00000197548) #12 VGLL4 (ENSG00000144560) #13 TAMM41 (ENSG00000144559) #14 SYN2 (ENSG00000157152) #18 TIMP4 (ENSG00000157150) #17 PPARG (ENSG00000132170) #19 TSEN2 (ENSG00000154743) #20 MKRN2OS (ENSG00000225526) #21 MKRN2 (ENSG00000075975) #22 RAF1 (ENSG00000132155) #23 TMEM40 (ENSG00000088726) #24 CAND2 (ENSG00000144712) #25 ENSG00000289809 RPL32 (ENSG00000144713) ##26 IQSEC1 (ENSG00000144711) NUP210 (ENSG00000132182) HDAC11 (ENSG00000163517) FBLN2 (ENSG00000163520) WNT7A (ENSG00000154764) CHCHD4 (ENSG00000163528) TMEM43 (ENSG00000170876) XPC (ENSG00000154767) LSM3 (ENSG00000170860) SLC6A6 (ENSG00000131389) Pan ANCESTRAL SPECIES 2 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.a.c ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00390000016970.h ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00910000148097 ENSGT00940000158273 #19 ENSGT00390000013266.a #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00940000153309.c.a.e.b ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00940000153973.c.a.b.b ##26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000013132.q.a.d ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 Bonobo MODERN SPECIES 16 ENSPPAG00000029625 SLC6A11 (ENSPPAG00000039217) SLC6A1 (ENSPPAG00000042842) HRH1 (ENSPPAG00000023416) #11 ATG7 (ENSPPAG00000040386) #12 VGLL4 (ENSPPAG00000035709) #13 TAMM41 (ENSPPAG00000037692) #14 ENSPPAG00000040309 SYN2 (ENSPPAG00000038622) #18 TIMP4 (ENSPPAG00000036078) #17 ENSPPAG00000030837 ENSPPAG00000028973 PPARG (ENSPPAG00000029006) #19 TSEN2 (ENSPPAG00000035317) #20 MKRN2OS (ENSPPAG00000032216) #21 MKRN2 (ENSPPAG00000036523) #22 RAF1 (ENSPPAG00000035239) #23 ENSPPAG00000024005 TMEM40 (ENSPPAG00000019163) #24 ENSPPAG00000036413 CAND2 (ENSPPAG00000004317) #25 RPL32 (ENSPPAG00000008188) ##26 IQSEC1 (ENSPPAG00000036448) ENSPPAG00000028546 NUP210 (ENSPPAG00000037715) HDAC11 (ENSPPAG00000037567) FBLN2 (ENSPPAG00000015671) WNT7A (ENSPPAG00000030187) CHCHD4 (ENSPPAG00000032925) TMEM43 (ENSPPAG00000000804) XPC (ENSPPAG00000043453) Chimpanzee MODERN SPECIES 16 SLC6A11 (ENSPTRG00000014621) SLC6A1 (ENSPTRG00000014622) ENSPTRG00000050374 HRH1 (ENSPTRG00000030304) #11 ATG7 (ENSPTRG00000014625) #12 VGLL4 (ENSPTRG00000014626) #13 TAMM41 (ENSPTRG00000014628) #14 ENSPTRG00000049448 SYN2 (ENSPTRG00000052430) #18 TIMP4 (ENSPTRG00000014630) #17 ENSPTRG00000043822 ENSPTRG00000045342 PPARG (ENSPTRG00000014632) #19 TSEN2 (ENSPTRG00000014633) #20 MKRN2OS (ENSPTRG00000046408) #21 MKRN2 (ENSPTRG00000014634) #22 RAF1 (ENSPTRG00000014635) #23 TMEM40 (ENSPTRG00000014636) #24 ENSPTRG00000051489 CAND2 (ENSPTRG00000014637) #25 ENSPTRG00000050657 ##26 IQSEC1 (ENSPTRG00000014639) ENSPTRG00000046540 NUP210 (ENSPTRG00000014640) HDAC11 (ENSPTRG00000014641) FBLN2 (ENSPTRG00000014642) WNT7A (ENSPTRG00000046824) CHCHD4 (ENSPTRG00000014647) TMEM43 (ENSPTRG00000014648) XPC (ENSPTRG00000014649) LSM3 (ENSPTRG00000014650) Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.b ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00390000016970.h ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084.bb #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a.a ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00940000153393.B.v ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.b ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084.bb #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00940000153973.c.a.b.b ##26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a.a ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.b ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00390000016970.h ENSGT00390000009405.b.c.b.b ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084.bb #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a.e.b ##26 ENSGT00940000153973.c.a.b.b ##26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a.a ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.b ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00390000016970.h ENSGT00390000009405.b.c.b.b ENSGT01100000263509.a.a.b.b.a.b.b.b.a.a.a.a.b.b ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084.bb #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a.d ##26 ENSGT00940000153973.c.a.b.b ##26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a.a ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 Cercopithecinae_d ANCESTRAL SPECIES 12 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.b ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00390000016970.h ENSGT00390000009405.b.c.b.b ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084.bb #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b ##26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00910000147988 ENSGT00940000158523 ENSGT00390000013132.q.a.a ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 Drill MODERN SPECIES 874 SYN2 (ENSMLEG00000030880) #18 TIMP4 (ENSMLEG00000040251) #17 PPARG (ENSMLEG00000043422) #19 TSEN2 (ENSMLEG00000038210) #20 MKRN2OS (ENSMLEG00000006675) #21 MKRN2 (ENSMLEG00000006880) #22 RAF1 (ENSMLEG00000029839) #23 ENSMLEG00000039626 TMEM40 (ENSMLEG00000039986) #24 CAND2 (ENSMLEG00000034596) #25 RPL32 (ENSMLEG00000033655) ##26 IQSEC1 (ENSMLEG00000035708) NUP210 (ENSMLEG00000038717) HDAC11 (ENSMLEG00000038310) FBLN2 (ENSMLEG00000040866) WNT7A (ENSMLEG00000042427) ENSMLEG00000031201 TMEM43 (ENSMLEG00000035818) XPC (ENSMLEG00000041682) LSM3 (ENSMLEG00000036162) SLC6A6 (ENSMLEG00000040687) Sooty mangabey MODERN SPECIES 650 SLC6A11 (ENSCATG00000032556) SLC6A1 (ENSCATG00000019250) ENSCATG00000031939 HRH1 (ENSCATG00000000316) #11 ATG7 (ENSCATG00000034745) #12 VGLL4 (ENSCATG00000041543) #13 TAMM41 (ENSCATG00000033399) #14 ENSCATG00000031162 ENSCATG00000042881 SYN2 (ENSCATG00000031791) #18 TIMP4 (ENSCATG00000034145) #17 ENSCATG00000017268 PPARG (ENSCATG00000022947) #19 TSEN2 (ENSCATG00000031911) #20 MKRN2OS (ENSCATG00000040481) #21 MKRN2 (ENSCATG00000041591) #22 ENSCATG00000035852 #23 ENSCATG00000001547 ENSCATG00000031525 TMEM40 (ENSCATG00000027847) #24 CAND2 (ENSCATG00000038720) #25 RPL32 (ENSCATG00000038198) ##26 IQSEC1 (ENSCATG00000037864) NUP210 (ENSCATG00000035260) HDAC11 (ENSCATG00000026123) FBLN2 (ENSCATG00000038061) ENSCATG00000033105 WNT7A (ENSCATG00000033711) TMEM43 (ENSCATG00000038308) XPC (ENSCATG00000036725) ENSCATG00000039421 Olive baboon MODERN SPECIES 11 SEC13 (ENSPANG00000033927) ATP2B2 (ENSPANG00000012883) SLC6A11 (ENSPANG00000009913) SLC6A1 (ENSPANG00000009643) HRH1 (ENSPANG00000031157) #11 ATG7 (ENSPANG00000019142) #12 VGLL4 (ENSPANG00000024761) #13 TAMM41 (ENSPANG00000025444) #14 ENSPANG00000031360 ENSPANG00000045955 TIMP4 (ENSPANG00000001070) #17 SYN2 (ENSPANG00000024762) #18 PPARG (ENSPANG00000016461) #19 MKRN2OS (ENSPANG00000008481) #21 TSEN2 (ENSPANG00000013415) #20 MKRN2 (ENSPANG00000021307) #22 ENSPANG00000035680 RAF1 (ENSPANG00000008568) #23 TMEM40 (ENSPANG00000014208) #24 CAND2 (ENSPANG00000018464) #25 ENSPANG00000007693 ##26 IQSEC1 (ENSPANG00000006877) NUP210 (ENSPANG00000006878) HDAC11 (ENSPANG00000024163) ENSPANG00000047403 ENSPANG00000007694 WNT7A (ENSPANG00000046909) CHCHD4 (ENSPANG00000025946) TMEM43 (ENSPANG00000012906) XPC (ENSPANG00000004175) LSM3 (ENSPANG00000009378) Macaca ANCESTRAL SPECIES 5 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000013132.q.b ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00390000016970.h ENSGT00390000009405.b.c.b.b ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084.bb #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.a.a #26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000013132.q.a.a ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 Pig-tailed macaque MODERN SPECIES 546 ATP2B2 (ENSMNEG00000040193) SLC6A11 (ENSMNEG00000031997) SLC6A1 (ENSMNEG00000031841) ENSMNEG00000030516 HRH1 (ENSMNEG00000008240) #11 ATG7 (ENSMNEG00000028392) #12 VGLL4 (ENSMNEG00000039421) #13 TAMM41 (ENSMNEG00000040547) #14 ENSMNEG00000042157 ENSMNEG00000024024 SYN2 (ENSMNEG00000033226) #18 TIMP4 (ENSMNEG00000028992) #17 PPARG (ENSMNEG00000028217) #19 TSEN2 (ENSMNEG00000025898) #20 MKRN2OS (ENSMNEG00000034066) #21 MKRN2 (ENSMNEG00000031197) #22 RAF1 (ENSMNEG00000040519) #23 TMEM40 (ENSMNEG00000027829) #24 CAND2 (ENSMNEG00000044168) #25 RPL32 (ENSMNEG00000030893) #26 IQSEC1 (ENSMNEG00000042270) ENSMNEG00000029455 NUP210 (ENSMNEG00000041495) HDAC11 (ENSMNEG00000040546) FBLN2 (ENSMNEG00000035537) WNT7A (ENSMNEG00000037464) ENSMNEG00000040402 TMEM43 (ENSMNEG00000032802) XPC (ENSMNEG00000038400) ENSMNEG00000043632 SLC6A6 (ENSMNEG00000040859) Macaca_a ANCESTRAL SPECIES 5 ENSGT00390000004064 ENSGT00940000153393.B.v ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT01100000263493.a.b.a.b.a.a.b.a.b.b.b.a.b.b.a.a.b.a.a ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084.bb #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a.e.b ##26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT01100000263539.b.a.a.a.a.a.b.b.a.a.a.a.a.b.a.a.a.a.b ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000013132.r ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 Rhesus MODERN SPECIES 11 SEC13 (ENSMMUG00000019936) ATP2B2 (ENSMMUG00000019938) SLC6A11 (ENSMMUG00000005916) SLC6A1 (ENSMMUG00000005917) HRH1 (ENSMMUG00000056308) #11 ATG7 (ENSMMUG00000021804) #12 VGLL4 (ENSMMUG00000021806) #13 ENSMMUG00000062782 TAMM41 (ENSMMUG00000013372) #14 ENSMMUG00000055179 SYN2 (ENSMMUG00000001120) #18 TIMP4 (ENSMMUG00000001127) #17 PPARG (ENSMMUG00000007191) #19 TSEN2 (ENSMMUG00000007195) #20 MKRN2OS (ENSMMUG00000031993) #21 MKRN2 (ENSMMUG00000009536) #22 RAF1 (ENSMMUG00000007450) #23 TMEM40 (ENSMMUG00000010276) #24 CAND2 (ENSMMUG00000001339) #25 RPL32 (ENSMMUG00000001340) #26 IQSEC1 (ENSMMUG00000001342) NUP210 (ENSMMUG00000015979) ENSMMUG00000056487 HDAC11 (ENSMMUG00000001369) FBLN2 (ENSMMUG00000017659) WNT7A (ENSMMUG00000018445) XPC (ENSMMUG00000023125) TMEM43 (ENSMMUG00000023124) SLC6A6 (ENSMMUG00000006340) GRIP2 (ENSMMUG00000006342) ENSMMUG00000062011 Crab-eating macaque MODERN SPECIES 11 SEC13 (ENSMFAG00000037200) ATP2B2 (ENSMFAG00000034151) SLC6A11 (ENSMFAG00000034176) SLC6A1 (ENSMFAG00000007438) HRH1 (ENSMFAG00000030336) #11 ATG7 (ENSMFAG00000040779) #12 VGLL4 (ENSMFAG00000009745) #13 TAMM41 (ENSMFAG00000033931) #14 ENSMFAG00000059255 SYN2 (ENSMFAG00000041997) #18 ENSMFAG00000021078 TIMP4 (ENSMFAG00000052548) #17 PPARG (ENSMFAG00000034317) #19 TSEN2 (ENSMFAG00000038583) #20 MKRN2OS (ENSMFAG00000031892) #21 MKRN2 (ENSMFAG00000035845) #22 ENSMFAG00000051059 RAF1 (ENSMFAG00000038061) #23 TMEM40 (ENSMFAG00000039365) #24 CAND2 (ENSMFAG00000044298) #25 ENSMFAG00000045190 ##26 IQSEC1 (ENSMFAG00000043873) NUP210 (ENSMFAG00000044461) ENSMFAG00000058794 HDAC11 (ENSMFAG00000036363) FBLN2 (ENSMFAG00000003835) WNT7A (ENSMFAG00000044809) ENSMFAG00000044351 TMEM43 (ENSMFAG00000047872) XPC (ENSMFAG00000031847) LSM3 (ENSMFAG00000063615) Vervet Monkey MODERN SPECIES 14 GHRL (ENSCSAG00000010031) SEC13 (ENSCSAG00000010026) ATP2B2 (ENSCSAG00000010018) ENSCSAG00000010009 SLC6A11 (ENSCSAG00000009991) SLC6A1 (ENSCSAG00000009912) HRH1 (ENSCSAG00000018810) #11 ATG7 (ENSCSAG00000009887) #12 VGLL4 (ENSCSAG00000009873) #13 TAMM41 (ENSCSAG00000009866) #14 SYN2 (ENSCSAG00000009855) #18 TIMP4 (ENSCSAG00000009845) #17 PPARG (ENSCSAG00000009839) #19 TSEN2 (ENSCSAG00000009822) #20 MKRN2OS (ENSCSAG00000009764) #21 MKRN2 (ENSCSAG00000009754) #22 RAF1 (ENSCSAG00000009721) #23 TMEM40 (ENSCSAG00000009604) #24 CAND2 (ENSCSAG00000009557) #25 RPL32 (ENSCSAG00000009485) ##26 IQSEC1 (ENSCSAG00000009482) NUP210 (ENSCSAG00000009474) HDAC11 (ENSCSAG00000009462) FBLN2 (ENSCSAG00000009449) WNT7A (ENSCSAG00000009439) CHCHD4 (ENSCSAG00000009431) TMEM43 (ENSCSAG00000009426) XPC (ENSCSAG00000009411) SLC6A6 (ENSCSAG00000009391) GRIP2 (ENSCSAG00000009353) CCDC174 (ENSCSAG00000009294) Rhinopithecus ANCESTRAL SPECIES 113 ENSGT00940000157569 ENSGT00940000156027 ENSGT00910000148795 ENSGT00390000013132.q.b ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00910000148924 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00390000016970.h ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273.r #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084.bb #23 Black snub-nosed monkey MODERN SPECIES 1833 PPARG (ENSRBIG00000042269) #19 TSEN2 (ENSRBIG00000033133) #20 MKRN2OS (ENSRBIG00000033018) #21 MKRN2 (ENSRBIG00000039128) #22 ENSRBIG00000029284 #23 ENSRBIG00000027349 Golden snub-nosed monkey MODERN SPECIES 2016 SLC6A11 (ENSRROG00000031463) SLC6A1 (ENSRROG00000040161) ENSRROG00000044510 HRH1 (ENSRROG00000012382) #11 ATG7 (ENSRROG00000041008) #12 ENSRROG00000038335 VGLL4 (ENSRROG00000032842) #13 TAMM41 (ENSRROG00000034628) #14 ENSRROG00000042628 SYN2 (ENSRROG00000040768) #18 TIMP4 (ENSRROG00000043357) #17 PPARG (ENSRROG00000044807) #19 ENSRROG00000034587 TSEN2 (ENSRROG00000041156) #20 MKRN2OS (ENSRROG00000037999) #21 MKRN2 (ENSRROG00000033767) #22 ENSRROG00000041930 #23 Platyrrhini ANCESTRAL SPECIES 18 ENSGT00940000153393.B.u.a ENSGT00910000147252 ENSGT00940000153393.B.v ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509.e #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000158890.q ENSGT00940000153973.c.a.b.a.b ##26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000013132.p ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 Cebidae ANCESTRAL SPECIES 14 ENSGT00940000153393.B.u.a ENSGT00910000147252 ENSGT00940000153393.B.v ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509.e #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000158890.q ENSGT00940000153973.c.a.b.b ##26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000013132.p ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 Cebidae_a ANCESTRAL SPECIES 47 ENSGT00940000153393.B.u.a ENSGT00910000147252 ENSGT00940000153393.B.v ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509.e #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b ##26 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000013132.p ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 Capuchin MODERN SPECIES 281 TATDN2 (ENSCCAG00000024974) GHRL (ENSCCAG00000022227) SEC13 (ENSCCAG00000026715) ATP2B2 (ENSCCAG00000032907) SLC6A11 (ENSCCAG00000030058) SLC6A1 (ENSCCAG00000026677) ATG7 (ENSCCAG00000035255) #12 VGLL4 (ENSCCAG00000032615) #13 TAMM41 (ENSCCAG00000025773) #14 TIMP4 (ENSCCAG00000035892) #17 SYN2 (ENSCCAG00000034848) #18 PPARG (ENSCCAG00000027364) #19 TSEN2 (ENSCCAG00000037851) #20 MKRN2OS (ENSCCAG00000031553) #21 ENSCCAG00000022711 MKRN2 (ENSCCAG00000019802) #22 RAF1 (ENSCCAG00000023070) #23 TMEM40 (ENSCCAG00000020743) #24 CAND2 (ENSCCAG00000032849) #25 RPL32 (ENSCCAG00000025373) ##26 IQSEC1 (ENSCCAG00000024388) Bolivian squirrel monkey MODERN SPECIES 62 GHRL (ENSSBOG00000005768) ENSSBOG00000023709 ENSSBOG00000020409 ATP2B2 (ENSSBOG00000020057) SLC6A11 (ENSSBOG00000029132) SLC6A1 (ENSSBOG00000022090) HRH1 (ENSSBOG00000015886) #11 ATG7 (ENSSBOG00000024304) #12 VGLL4 (ENSSBOG00000026167) #13 TAMM41 (ENSSBOG00000034374) #14 TIMP4 (ENSSBOG00000032293) #17 ENSSBOG00000030292 #18 PPARG (ENSSBOG00000005712) #19 TSEN2 (ENSSBOG00000035499) #20 MKRN2OS (ENSSBOG00000033896) #21 MKRN2 (ENSSBOG00000034434) #22 RAF1 (ENSSBOG00000015492) #23 ACAP2 (ENSSBOG00000029437) XXYLT1 (ENSSBOG00000034641) FAM43A (ENSSBOG00000018424) LSG1 (ENSSBOG00000034938) TMEM44 (ENSSBOG00000020794) ATP13A3 (ENSSBOG00000005544) LRRC15 (ENSSBOG00000031469) CPN2 (ENSSBOG00000014283) ENSSBOG00000033814 HES1 (ENSSBOG00000028215) OPA1 (ENSSBOG00000021973) ATP13A4 (ENSSBOG00000032487) ATP13A5 (ENSSBOG00000030531) PLAAT1 (ENSSBOG00000030423) Marmoset DUPLICATION Marmoset MODERN SPECIES 6 SLC6A1 (ENSCJAG00000016551) ENSCJAG00000072589 ENSCJAG00000070697 ENSCJAG00000084863 HRH1 (ENSCJAG00000043961) #11 ATG7 (ENSCJAG00000016583) #12 ENSCJAG00000058577 VGLL4 (ENSCJAG00000016643) #13 SYN2 (ENSCJAG00000016647) #18 TIMP4 (ENSCJAG00000038791) #17 PPARG (ENSCJAG00000016687) #19 ENSCJAG00000086839 ENSCJAG00000075859 TSEN2 (ENSCJAG00000080511) #20 MKRN2OS (ENSCJAG00000040602) #21 ENSCJAG00000016733 #22 RAF1 (ENSCJAG00000016737) #23 TMEM40 (ENSCJAG00000016751) #24 CAND2 (ENSCJAG00000016770) #25 ENSCJAG00000061647 IQSEC1 (ENSCJAG00000016781) NUP210 (ENSCJAG00000016795) HDAC11 (ENSCJAG00000016844) FBLN2 (ENSCJAG00000016873) WNT7A (ENSCJAG00000040771) TMEM43 (ENSCJAG00000016924) ENSCJAG00000072125 ENSCJAG00000087072 XPC (ENSCJAG00000016952) ENSCJAG00000042664 ENSCJAG00000079599 Marmoset MODERN SPECIES 16 ENSCJAG00000073079 ENSCJAG00000062395 HACE1 (ENSCJAG00000001597) LIN28B (ENSCJAG00000001671) BVES (ENSCJAG00000001683) POPDC3 (ENSCJAG00000001700) ENSCJAG00000071190 PREP (ENSCJAG00000001710) ENSCJAG00000074740 ENSCJAG00000085831 ATG5 (ENSCJAG00000006306) ENSCJAG00000079207 PRDM1 (ENSCJAG00000006332) ENSCJAG00000074624 CRYBG1 (ENSCJAG00000006246) ENSCJAG00000079990 #22 RTN4IP1 (ENSCJAG00000006218) QRSL1 (ENSCJAG00000006200) ENSCJAG00000058620 ENSCJAG00000073856 MTRES1 (ENSCJAG00000046921) BEND3 (ENSCJAG00000039628) ENSCJAG00000080202 PDSS2 (ENSCJAG00000006153) ENSCJAG00000076519 ENSCJAG00000084385 SOBP (ENSCJAG00000006119) SCML4 (ENSCJAG00000006102) SEC63 (ENSCJAG00000005998) OSTM1 (ENSCJAG00000040617) ENSCJAG00000070984 Mas night monkey MODERN SPECIES 321 CRELD1 (ENSANAG00000026557) ENSANAG00000021183 IL17RE (ENSANAG00000022892) CIDEC (ENSANAG00000024285) ENSANAG00000019292 HRH1 (ENSANAG00000031051) #11 ENSANAG00000032758 #12 ENSANAG00000012369 VGLL4 (ENSANAG00000038129) #13 TAMM41 (ENSANAG00000037740) #14 SYN2 (ENSANAG00000021892) #18 TIMP4 (ENSANAG00000032042) #17 PPARG (ENSANAG00000020115) #19 TSEN2 (ENSANAG00000026891) #20 MKRN2OS (ENSANAG00000026143) #21 MKRN2 (ENSANAG00000022646) #22 RAF1 (ENSANAG00000031934) #23 TMEM40 (ENSANAG00000036821) #24 CAND2 (ENSANAG00000020366) #25 ENSANAG00000020589 ##26 IQSEC1 (ENSANAG00000028368) NUP210 (ENSANAG00000036448) HDAC11 (ENSANAG00000035737) FBLN2 (ENSANAG00000027135) WNT7A (ENSANAG00000033071) CHCHD4 (ENSANAG00000034814) TMEM43 (ENSANAG00000036418) XPC (ENSANAG00000021069) LSM3 (ENSANAG00000034627) SLC6A6 (ENSANAG00000025733) GRIP2 (ENSANAG00000037475) Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Tree shrew MODERN SPECIES 2688 TSEN2 (ENSTBEG00000011740) #20 ENSTBEG00000012118 #22 RAF1 (ENSTBEG00000012253) #23 Glires ANCESTRAL SPECIES 2 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Lagomorpha ANCESTRAL SPECIES 105 ENSGT00940000157569 ENSGT00940000156027 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000175447 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Rabbit MODERN SPECIES 20 LARS2 (ENSOCUG00000001964) ENSOCUG00000024922 LIMD1 (ENSOCUG00000001984) SACM1L (ENSOCUG00000026080) SLC6A20 (ENSOCUG00000004216) LZTFL1 (ENSOCUG00000010140) SLC6A11 (ENSOCUG00000001627) ENSOCUG00000025657 ATG7 (ENSOCUG00000001908) #12 VGLL4 (ENSOCUG00000001911) #13 TIMP4 (ENSOCUG00000015952) #17 ENSOCUG00000015932 #18 PPARG (ENSOCUG00000013194) #19 TSEN2 (ENSOCUG00000013203) #20 MKRN2OS (ENSOCUG00000033126) #21 MKRN2 (ENSOCUG00000014171) #22 RAF1 (ENSOCUG00000014175) #23 ENSOCUG00000031173 #24 CAND2 (ENSOCUG00000009266) #25 ENSOCUG00000023407 ##26 ENSOCUG00000012999 #27 MBD4 (ENSOCUG00000013006) #28 IFT122 (ENSOCUG00000013015) #29 RHO (ENSOCUG00000013036) #30 ENSOCUG00000029379 PLXND1 (ENSOCUG00000013049) #31 TMCC1 (ENSOCUG00000013071) #33 TRH (ENSOCUG00000006337) #35 RBSN (ENSOCUG00000006988) #36 MRPS25 (ENSOCUG00000006984) #37 NR2C2 (ENSOCUG00000006975) Pika MODERN SPECIES 1896 TAMM41 (ENSOPRG00000003357) #14 SYN2 (ENSOPRG00000003375) #18 TIMP4 (ENSOPRG00000003424) #17 PPARG (ENSOPRG00000003439) #19 TSEN2 (ENSOPRG00000003456) #20 MKRN2 (ENSOPRG00000003501) #22 RAF1 (ENSOPRG00000003522) #23 ENSOPRG00000003562 #25 Rodentia ANCESTRAL SPECIES 2 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Rodentia_A ANCESTRAL SPECIES 27 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Hystricomorpha ANCESTRAL SPECIES 48 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT01020000230394.e.b.a #31 ENSGT00390000016951 #35 ENSGT00940000160900 ENSGT00940000155189 #33 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Hystricomorpha_a ANCESTRAL SPECIES 6 ENSGT00940000155180.b ENSGT00940000156857 ENSGT00440000033504.B ENSGT00940000155867 ENSGT00940000161249 ENSGT00940000158225 ENSGT00950000182956.b.b.a.b ENSGT00940000158155 ENSGT00390000003219 ENSGT00940000158804 ENSGT00390000006066 ENSGT00390000005378 ENSGT00940000157200 ENSGT00940000157312.h ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 ENSGT00940000157922 ENSGT00940000153655.B ENSGT00440000033958 Guinea pig MODERN SPECIES 109 APBB1IP (ENSCPOG00000004077) GAD2 (ENSCPOG00000013724) ENSCPOG00000039199 ENSCPOG00000013721 ENSCPOG00000034310 GPR158 (ENSCPOG00000001565) ENSCPOG00000000291 ENKUR (ENSCPOG00000009590) ARHGAP21 (ENSCPOG00000004505) ENSCPOG00000031884 ENSCPOG00000005850 ITFG2 (ENSCPOG00000021230) FKBP4 (ENSCPOG00000002453) ENSCPOG00000009944 MKRN2OS (ENSCPOG00000032819) #21 MKRN2 (ENSCPOG00000001208) #22 RAF1 (ENSCPOG00000001210) #23 TMEM40 (ENSCPOG00000025632) #24 CAND2 (ENSCPOG00000023286) #25 RPL32 (ENSCPOG00000019967) ##26 ENSCPOG00000004970 #28 IFT122 (ENSCPOG00000004975) #29 RHO (ENSCPOG00000004984) #30 PLXND1 (ENSCPOG00000004989) #31 TMCC1 (ENSCPOG00000009299) #33 RBSN (ENSCPOG00000003200) #36 MRPS25 (ENSCPOG00000020398) #37 NR2C2 (ENSCPOG00000001512) FGD5 (ENSCPOG00000013157) C3orf20 (ENSCPOG00000006783) CCDC174 (ENSCPOG00000039402) Hystricomorpha_b ANCESTRAL SPECIES 2 ENSGT00940000155180.b ENSGT00940000156857 ENSGT00440000033504.B ENSGT00940000155867 ENSGT00940000161249 ENSGT00940000158225 ENSGT00950000182956.b.b.a.b ENSGT00940000158155 ENSGT00390000003219 ENSGT00940000158804 ENSGT00390000006066 ENSGT00390000005378 ENSGT00940000157200 ENSGT00940000157312.h ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 ENSGT00940000157922 ENSGT00940000153655.B ENSGT00440000033958 Degu MODERN SPECIES 274 ENSODEG00000018801 HMCES (ENSODEG00000002476) ENSODEG00000002503 TSEN2 (ENSODEG00000002629) #20 PPARG (ENSODEG00000002659) #19 ENSODEG00000001988 #18 TIMP4 (ENSODEG00000002023) #17 TAMM41 (ENSODEG00000002076) #14 ENSODEG00000018794 ENSODEG00000002124 #13 ATG7 (ENSODEG00000002299) #12 SLC6A1 (ENSODEG00000002644) SLC6A11 (ENSODEG00000002665) ENSODEG00000002676 MKRN2OS (ENSODEG00000002688) #21 MKRN2 (ENSODEG00000002702) #22 RAF1 (ENSODEG00000002734) #23 TMEM40 (ENSODEG00000002755) #24 CAND2 (ENSODEG00000002821) #25 ENSODEG00000002891 #26 ENSODEG00000002902 #28 IFT122 (ENSODEG00000003013) #29 RHO (ENSODEG00000003304) #30 PLXND1 (ENSODEG00000003347) #31 TMCC1 (ENSODEG00000001710) #33 ENSODEG00000001772 ENSODEG00000001849 ENSODEG00000001861 NR2C2 (ENSODEG00000001892) MRPS25 (ENSODEG00000001966) #37 RBSN (ENSODEG00000001991) #36 Long-tailed chinchilla MODERN SPECIES 136 ACBD7 (ENSCLAG00000010962) RPP38 (ENSCLAG00000010194) NMT2 (ENSCLAG00000008204) FAM171A1 (ENSCLAG00000009809) ENSCLAG00000009091 ENSCLAG00000008194 TEAD4 (ENSCLAG00000012070) TULP3 (ENSCLAG00000017345) RHNO1 (ENSCLAG00000017326) FOXM1 (ENSCLAG00000014183) TEX52 (ENSCLAG00000013429) ITFG2 (ENSCLAG00000016639) FKBP4 (ENSCLAG00000013510) ENSCLAG00000011764 MKRN2OS (ENSCLAG00000009109) #21 MKRN2 (ENSCLAG00000008755) #22 RAF1 (ENSCLAG00000010316) #23 TMEM40 (ENSCLAG00000009668) #24 CAND2 (ENSCLAG00000007541) #25 ENSCLAG00000007426 ##26 MBD4 (ENSCLAG00000008974) #28 IFT122 (ENSCLAG00000006170) #29 RHO (ENSCLAG00000006233) #30 PLXND1 (ENSCLAG00000012627) #31 TMCC1 (ENSCLAG00000014727) #33 RBSN (ENSCLAG00000011613) #36 MRPS25 (ENSCLAG00000008381) #37 NR2C2 (ENSCLAG00000011082) FGD5 (ENSCLAG00000011953) C3orf20 (ENSCLAG00000013841) CCDC174 (ENSCLAG00000011014) Naked mole-rat female MODERN SPECIES 27 ENSHGLG00000000350 ENSHGLG00000045274 HRH1 (ENSHGLG00000044045) #11 ENSHGLG00000002369 #13 ENSHGLG00000000122 ENSHGLG00000000094 ENSHGLG00000037886 DNAJB8 (ENSHGLG00000046802) GATA2 (ENSHGLG00000000985) ENSHGLG00000000920 ENSHGLG00000039046 ENSHGLG00000019586 ENSHGLG00000032284 ENSHGLG00000045316 ENSHGLG00000017856 #21 ENSHGLG00000018194 #22 ENSHGLG00000018214 #23 ENSHGLG00000037560 ENSHGLG00000032617 ENSHGLG00000039038 ENSHGLG00000033042 ENSHGLG00000015498 #24 ENSHGLG00000015580 #25 ENSHGLG00000040769 ##26 ENSHGLG00000015777 #27 MBD4 (ENSHGLG00000009034) #28 IFT122 (ENSHGLG00000009113) #29 RHO (ENSHGLG00000006668) #30 ENSHGLG00000040416 ENSHGLG00000040044 #33 ENSHGLG00000000240 Sciuridae ANCESTRAL SPECIES 41 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Marmotini ANCESTRAL SPECIES 49 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00960000190360 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Marmotini_b ANCESTRAL SPECIES 62 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00960000190360 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Arctic ground squirrel MODERN SPECIES 23 GHRL (ENSUPAG00010022997) SEC13 (ENSUPAG00010022998) ATP2B2 (ENSUPAG00010022999) SLC6A11 (ENSUPAG00010023004) SLC6A1 (ENSUPAG00010023006) ENSUPAG00010023009 HRH1 (ENSUPAG00010023010) #11 ATG7 (ENSUPAG00010023011) #12 VGLL4 (ENSUPAG00010023024) #13 ENSUPAG00010023027 #14 SYN2 (ENSUPAG00010023028) #18 TIMP4 (ENSUPAG00010023029) #17 PPARG (ENSUPAG00010023031) #19 TSEN2 (ENSUPAG00010023034) #20 MKRN2OS (ENSUPAG00010023035) #21 MKRN2 (ENSUPAG00010023036) #22 RAF1 (ENSUPAG00010023038) #23 TMEM40 (ENSUPAG00010023040) #24 CAND2 (ENSUPAG00010023044) #25 ENSUPAG00010023046 ##26 EFCAB12 (ENSUPAG00010023049) #27 ENSUPAG00010023052 #28 ENSUPAG00010023053 #28 IFT122 (ENSUPAG00010023058) #29 RHO (ENSUPAG00010023066) #30 H1-8 (ENSUPAG00010023069) PLXND1 (ENSUPAG00010000023) #31 TMCC1 (ENSUPAG00010000491) #33 TRH (ENSUPAG00010000545) #35 RBSN (ENSUPAG00010000555) #36 MRPS25 (ENSUPAG00010000567) #37 Squirrel MODERN SPECIES 202 TATDN2 (ENSSTOG00000013999) GHRL (ENSSTOG00000022095) SEC13 (ENSSTOG00000014017) ATP2B2 (ENSSTOG00000014026) SLC6A11 (ENSSTOG00000028999) SLC6A1 (ENSSTOG00000007598) HRH1 (ENSSTOG00000015286) #11 ATG7 (ENSSTOG00000015288) #12 VGLL4 (ENSSTOG00000025247) #13 ENSSTOG00000028589 TIMP4 (ENSSTOG00000034531) #17 SYN2 (ENSSTOG00000011519) #18 PPARG (ENSSTOG00000012778) #19 TSEN2 (ENSSTOG00000000538) #20 MKRN2OS (ENSSTOG00000031428) #21 MKRN2 (ENSSTOG00000010520) #22 RAF1 (ENSSTOG00000025146) #23 CAND2 (ENSSTOG00000023136) #25 ENSSTOG00000026505 ##26 MBD4 (ENSSTOG00000020663) #28 IFT122 (ENSSTOG00000004353) #29 RHO (ENSSTOG00000028352) #30 PLXND1 (ENSSTOG00000024621) #31 TMCC1 (ENSSTOG00000019869) #33 TRH (ENSSTOG00000026247) #35 RBSN (ENSSTOG00000022986) #36 MRPS25 (ENSSTOG00000030962) #37 NR2C2 (ENSSTOG00000005250) FGD5 (ENSSTOG00000005202) C3orf20 (ENSSTOG00000002907) CCDC174 (ENSSTOG00000027414) Alpin marmot MODERN SPECIES 40 ATP2B2 (ENSMMMG00000009587) SLC6A11 (ENSMMMG00000009836) SLC6A1 (ENSMMMG00000009856) ENSMMMG00000009895 HRH1 (ENSMMMG00000009921) #11 ENSMMMG00000009925 ATG7 (ENSMMMG00000009966) #12 VGLL4 (ENSMMMG00000010304) #13 TAMM41 (ENSMMMG00000010322) #14 SYN2 (ENSMMMG00000010440) #18 ENSMMMG00000010687 #17 PPARG (ENSMMMG00000010840) #19 ENSMMMG00000010899 #20 ENSMMMG00000010907 #20 MKRN2OS (ENSMMMG00000010915) #21 MKRN2 (ENSMMMG00000010927) #22 ENSMMMG00000010950 RAF1 (ENSMMMG00000010957) #23 ENSMMMG00000010993 #25 ENSMMMG00000010997 ##26 EFCAB12 (ENSMMMG00000011023) #27 MBD4 (ENSMMMG00000011043) #28 IFT122 (ENSMMMG00000011068) #29 RHO (ENSMMMG00000011272) #30 ENSMMMG00000011299 ENSMMMG00000011319 #31 TMCC1 (ENSMMMG00000011365) #33 TRH (ENSMMMG00000011424) #35 RBSN (ENSMMMG00000011435) #36 MRPS25 (ENSMMMG00000011452) #37 NR2C2 (ENSMMMG00000011464) Eurasian red squirrel MODERN SPECIES 10 GHRL (ENSSVLG00005023970) SEC13 (ENSSVLG00005023877) ATP2B2 (ENSSVLG00005022802) SLC6A11 (ENSSVLG00005022396) SLC6A1 (ENSSVLG00005021844) HRH1 (ENSSVLG00005021749) #11 ATG7 (ENSSVLG00005021683) #12 VGLL4 (ENSSVLG00005021566) #13 ENSSVLG00005021494 TAMM41 (ENSSVLG00005021448) #14 TIMP4 (ENSSVLG00005021374) #17 SYN2 (ENSSVLG00005021130) #18 PPARG (ENSSVLG00005020780) #19 TSEN2 (ENSSVLG00005020543) #20 MKRN2OS (ENSSVLG00005020454) #21 MKRN2 (ENSSVLG00005020340) #22 ENSSVLG00005019978 #23 TMEM40 (ENSSVLG00005019760) #24 CAND2 (ENSSVLG00005019570) #25 ENSSVLG00005019450 #26 EFCAB12 (ENSSVLG00005019404) #27 MBD4 (ENSSVLG00005019308) #28 IFT122 (ENSSVLG00005018941) #29 RHO (ENSSVLG00005018827) #30 ENSSVLG00005018771 PLXND1 (ENSSVLG00005018384) #31 TMCC1 (ENSSVLG00005018250) #33 ENSSVLG00005018231 TRH (ENSSVLG00005018181) #35 RBSN (ENSSVLG00005018031) #36 MRPS25 (ENSSVLG00005017966) #37 Rodentia_B ANCESTRAL SPECIES 26 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Myomorpha ANCESTRAL SPECIES 36 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Muroidea ANCESTRAL SPECIES 37 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Muroidea_A ANCESTRAL SPECIES 4 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00940000153997.b.a.a ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 Cricetidae ANCESTRAL SPECIES 3 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00940000153973.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00940000153997.b.a.a ENSGT00940000155716 ENSGT00940000158282 Cricetinae ANCESTRAL SPECIES 8 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00940000153997.b.a.a ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 144 ENSCGRG00001017251 Ghrl (ENSCGRG00001018358) Sec13 (ENSCGRG00001019327) Atp2b2 (ENSCGRG00001021784) Slc6a11 (ENSCGRG00001000475) Slc6a1 (ENSCGRG00001006244) Hrh1 (ENSCGRG00001015773) #11 Atg7 (ENSCGRG00001017070) #12 Vgll4 (ENSCGRG00001001705) #13 Tamm41 (ENSCGRG00001003506) #14 Syn2 (ENSCGRG00001007902) #18 Timp4 (ENSCGRG00001010158) #17 Pparg (ENSCGRG00001013849) #19 Tsen2 (ENSCGRG00001017681) #20 Mkrn2os (ENSCGRG00001018483) #21 ENSCGRG00001019373 #22 Raf1 (ENSCGRG00001020096) #23 Tmem40 (ENSCGRG00001022432) #24 Cand2 (ENSCGRG00001024197) #25 ENSCGRG00001000039 ##26 Efcab12 (ENSCGRG00001000767) #27 Mbd4 (ENSCGRG00001003507) #28 Ift122 (ENSCGRG00001012761) #29 Rho (ENSCGRG00001018161) #30 H1f8 (ENSCGRG00001024504) Plxnd1 (ENSCGRG00001007901) #31 Tmcc1 (ENSCGRG00001016263) #33 Washc2 (ENSCGRG00001019572) Zfand4 (ENSCGRG00001023303) Marchf8 (ENSCGRG00001003616) Alox5 (ENSCGRG00001010128) Chinese hamster chok1gshd MODERN SPECIES 401 Kcnv2 (ENSCGRG00001018140) Pum3 (ENSCGRG00001016402) Rfx3 (ENSCGRG00001021745) Glis3 (ENSCGRG00001014233) Slc1a1 (ENSCGRG00001022336) ENSCGRG00001023585 Spata6l (ENSCGRG00001002881) Plpp6 (ENSCGRG00001012981) Cdc37l1 (ENSCGRG00001000264) AK3 (ENSCGRG00001007296) Rcl1 (ENSCGRG00001013748) Jak2 (ENSCGRG00001015840) Insl6 (ENSCGRG00001020673) Plgrkt (ENSCGRG00001023695) Cd274 (ENSCGRG00001024294) ENSCGRG00001013276 #22 Pdcd1lg2 (ENSCGRG00001015183) Ric1 (ENSCGRG00001016728) Ermp1 (ENSCGRG00001021468) Mlana (ENSCGRG00001024579) 9930021J03Rik (ENSCGRG00001008137) Ranbp6 (ENSCGRG00001012447) Il33 (ENSCGRG00001014000) Trpd52l3 (ENSCGRG00001011832) Uhrf2 (ENSCGRG00001019677) Gldc (ENSCGRG00001023952) Mbl2 (ENSCGRG00001015670) Dkk1 (ENSCGRG00001016431) Prkg1 (ENSCGRG00001023225) Cstf2t (ENSCGRG00001003222) A1cf (ENSCGRG00001017413) Golden Hamster MODERN SPECIES 622 Ghrl (ENSMAUG00000021031) Sec13 (ENSMAUG00000012999) Atp2b2 (ENSMAUG00000009448) Slc6a11 (ENSMAUG00000008311) Slc6a1 (ENSMAUG00000021551) Hrh1 (ENSMAUG00000009874) #11 Atg7 (ENSMAUG00000003276) #12 Vgll4 (ENSMAUG00000011159) #13 Tamm41 (ENSMAUG00000017519) #14 ENSMAUG00000013097 Timp4 (ENSMAUG00000018049) #17 ENSMAUG00000020153 #18 ENSMAUG00000012323 #19 ENSMAUG00000013859 #20 Mkrn2os (ENSMAUG00000010492) #21 Mkrn2 (ENSMAUG00000014200) #22 Raf1 (ENSMAUG00000015447) #23 Tmem40 (ENSMAUG00000015454) #24 Cand2 (ENSMAUG00000005693) #25 ENSMAUG00000020260 Efcab12 (ENSMAUG00000010638) #27 ENSMAUG00000014245 #28 Ift122 (ENSMAUG00000005778) #29 Rho (ENSMAUG00000002081) #30 H1f8 (ENSMAUG00000011359) Plxnd1 (ENSMAUG00000021112) #31 ENSMAUG00000021669 #33 Washc2 (ENSMAUG00000020725) ENSMAUG00000008109 ENSMAUG00000021879 Alox5 (ENSMAUG00000018983) Cricetidae_B ANCESTRAL SPECIES 14 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00940000153997.b.a.a ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 Northern American deer mouse MODERN SPECIES 16 Tatdn2 (ENSPEMG00000000467) Ghrl (ENSPEMG00000001433) Sec13 (ENSPEMG00000009433) Atp2b2 (ENSPEMG00000000259) Slc6a11 (ENSPEMG00000020194) Slc6a1 (ENSPEMG00000011702) Hrh1 (ENSPEMG00000028414) #11 Atg7 (ENSPEMG00000010473) #12 Vgll4 (ENSPEMG00000026845) #13 Tamm41 (ENSPEMG00000017033) #14 Syn2 (ENSPEMG00000016120) #18 Timp4 (ENSPEMG00000026166) #17 Pparg (ENSPEMG00000013545) #19 Tsen2 (ENSPEMG00000013175) #20 Mkrn2os (ENSPEMG00000012076) #21 Mkrn2 (ENSPEMG00000002776) #22 Raf1 (ENSPEMG00000012728) #23 Tmem40 (ENSPEMG00000002944) #24 ENSPEMG00000029699 ##25 ENSPEMG00000012965 ##26 Efcab12 (ENSPEMG00000012553) #27 Mbd4 (ENSPEMG00000006226) #28 Ift122 (ENSPEMG00000017389) #29 Rho (ENSPEMG00000008463) #30 H1f8 (ENSPEMG00000011381) Plxnd1 (ENSPEMG00000008271) #31 ENSPEMG00000024601 Tmcc1 (ENSPEMG00000000449) #33 Washc2 (ENSPEMG00000017284) Zfand4 (ENSPEMG00000008943) Marchf8 (ENSPEMG00000015311) Prairie vole MODERN SPECIES 84 Sec13 (ENSMOCG00000020249) Atp2b2 (ENSMOCG00000022399) Slc6a11 (ENSMOCG00000010284) Slc6a1 (ENSMOCG00000011689) Hrh1 (ENSMOCG00000009133) #11 ENSMOCG00000016658 Atg7 (ENSMOCG00000009400) #12 Vgll4 (ENSMOCG00000012297) #13 Tamm41 (ENSMOCG00000020960) #14 Syn2 (ENSMOCG00000000368) #18 Timp4 (ENSMOCG00000013297) #17 ENSMOCG00000013854 Pparg (ENSMOCG00000017202) #19 Tsen2 (ENSMOCG00000020824) #20 Mkrn2os (ENSMOCG00000010265) #21 Mkrn2 (ENSMOCG00000015472) #22 Raf1 (ENSMOCG00000012403) #23 Tmem40 (ENSMOCG00000021932) #24 Cand2 (ENSMOCG00000012580) #25 ENSMOCG00000015206 ##26 Efcab12 (ENSMOCG00000020496) #27 ENSMOCG00000019929 #28 ENSMOCG00000002466 #28 Ift122 (ENSMOCG00000014549) #29 Rho (ENSMOCG00000022070) #30 H1f8 (ENSMOCG00000005594) Plxnd1 (ENSMOCG00000014026) #31 Tmcc1 (ENSMOCG00000009713) #33 Washc2 (ENSMOCG00000018011) ENSMOCG00000018066 ENSMOCG00000002394 Murinae ANCESTRAL SPECIES 4 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00940000153997.b.a.a ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 Mus ANCESTRAL SPECIES 12 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00940000153997.b.a.a ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 Mus_A ANCESTRAL SPECIES 7 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00940000153997.b.a.a ENSGT00940000155716.g ENSGT00940000155716.h ENSGT00940000158282 Mus_B ANCESTRAL SPECIES 15 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00940000153973.c.a.b.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00940000153997.b.a.a ENSGT00940000155716.g ENSGT00940000155716.h Mouse MODERN SPECIES 15 ENSMUSG00000121578 Ghrl (ENSMUSG00000064177) Sec13 (ENSMUSG00000030298) Atp2b2 (ENSMUSG00000030302) Slc6a11 (ENSMUSG00000030307) Slc6a1 (ENSMUSG00000030310) Hrh1 (ENSMUSG00000053004) #11 Atg7 (ENSMUSG00000030314) #12 Vgll4 (ENSMUSG00000030315) #13 Tamm41 (ENSMUSG00000030316) #14 Syn2 (ENSMUSG00000009394) #18 Timp4 (ENSMUSG00000030317) #17 Pparg (ENSMUSG00000000440) #19 Tsen2 (ENSMUSG00000042389) #20 Mkrn2os (ENSMUSG00000068011) #21 Mkrn2 (ENSMUSG00000000439) #22 Raf1 (ENSMUSG00000000441) #23 Tmem40 (ENSMUSG00000059900) #24 Cand2 (ENSMUSG00000030319) #25 Rpl32 (ENSMUSG00000057841) ##26 Efcab12 (ENSMUSG00000030321) #27 Mbd4 (ENSMUSG00000030322) #28 Ift122 (ENSMUSG00000030323) #29 Rho (ENSMUSG00000030324) #30 H1f8 (ENSMUSG00000042279) Plxnd1 (ENSMUSG00000030123) #31 Tmcc1 (ENSMUSG00000030126) #33 Washc2 (ENSMUSG00000024104) Zfand4 (ENSMUSG00000042213) Marchf8 (ENSMUSG00000025702) Alox5 (ENSMUSG00000025701) Mus_C ANCESTRAL SPECIES 18 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00940000153997.b.a.a ENSGT00940000155716.g ENSGT00940000155716.h ENSGT00940000158282 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 3022 Atg7 (ENSMSIG00000031927) #12 ENSMSIG00000031929 ENSMSIG00000031930 #13 ENSMSIG00000031931 #14 Syn2 (ENSMSIG00000031932) #18 ENSMSIG00000031933 Timp4 (ENSMSIG00000031934) #17 Pparg (ENSMSIG00000031935) #19 Tsen2 (ENSMSIG00000031936) #20 Mkrn2os (ENSMSIG00000031937) #21 ENSMSIG00000031938 #22 Raf1 (ENSMSIG00000000188) #23 Tmem40 (ENSMSIG00000000359) #24 Cand2 (ENSMSIG00000000651) #25 Rpl32 (ENSMSIG00000000692) #26 Efcab12 (ENSMSIG00000000741) #27 Mbd4 (ENSMSIG00000000793) #28 Ift122 (ENSMSIG00000000881) #29 Rho (ENSMSIG00000001309) #30 ENSMSIG00000001359 H1f8 (ENSMSIG00000001367) ENSMSIG00000001422 #31 Tmcc1 (ENSMSIG00000001659) #33 ENSMSIG00000001776 Washc2 (ENSMSIG00000001796) Zfand4 (ENSMSIG00000001904) Steppe mouse MODERN SPECIES 2895 ENSMSIG00000001198 Soga3 (ENSMSIG00000001173) 9330159F19Rik (ENSMSIG00000001137) ENSMSIG00000001121 Rnf146 (ENSMSIG00000001088) Rspo3 (ENSMSIG00000001044) ENSMSIG00000001036 ENSMSIG00000001019 Cenpw (ENSMSIG00000000994) ENSMSIG00000000980 ENSMSIG00000000946 #22 Trmt11 (ENSMSIG00000000873) spretus MODERN SPECIES 15 Ghrl (MGP_SPRETEiJ_G0029767) Sec13 (MGP_SPRETEiJ_G0029768) Atp2b2 (MGP_SPRETEiJ_G0029769) Slc6a11 (MGP_SPRETEiJ_G0029770) Slc6a1 (MGP_SPRETEiJ_G0029771) Hrh1 (MGP_SPRETEiJ_G0029772) #11 Atg7 (MGP_SPRETEiJ_G0029773) #12 Vgll4 (MGP_SPRETEiJ_G0029774) #13 Tamm41 (MGP_SPRETEiJ_G0029775) #14 Syn2 (MGP_SPRETEiJ_G0029776) #18 MGP_SPRETEiJ_G0029777 Timp4 (MGP_SPRETEiJ_G0029778) #17 Pparg (MGP_SPRETEiJ_G0029779) #19 Tsen2 (MGP_SPRETEiJ_G0029780) #20 Mkrn2os (MGP_SPRETEiJ_G0029781) #21 Mkrn2 (MGP_SPRETEiJ_G0029782) #22 Raf1 (MGP_SPRETEiJ_G0029783) #23 Tmem40 (MGP_SPRETEiJ_G0029784) #24 Cand2 (MGP_SPRETEiJ_G0029785) #25 MGP_SPRETEiJ_G0029786 ##26 Efcab12 (MGP_SPRETEiJ_G0029787) #27 Mbd4 (MGP_SPRETEiJ_G0029788) #28 Ift122 (MGP_SPRETEiJ_G0029789) #29 Rho (MGP_SPRETEiJ_G0029790) #30 H1f8 (MGP_SPRETEiJ_G0029791) Plxnd1 (MGP_SPRETEiJ_G0029792) #31 MGP_SPRETEiJ_G0029793 #33 Washc2 (MGP_SPRETEiJ_G0029794) Zfand4 (MGP_SPRETEiJ_G0029795) MGP_SPRETEiJ_G0029796 Marchf8 (MGP_SPRETEiJ_G0029797) Ryukyu mouse MODERN SPECIES 15 Ghrl (MGP_CAROLIEiJ_G0028739) Sec13 (MGP_CAROLIEiJ_G0028740) Atp2b2 (MGP_CAROLIEiJ_G0028741) Slc6a11 (MGP_CAROLIEiJ_G0028742) Slc6a1 (MGP_CAROLIEiJ_G0028743) Hrh1 (MGP_CAROLIEiJ_G0028744) #11 Atg7 (MGP_CAROLIEiJ_G0028745) #12 Vgll4 (MGP_CAROLIEiJ_G0028746) #13 Tamm41 (MGP_CAROLIEiJ_G0028747) #14 Syn2 (MGP_CAROLIEiJ_G0028748) #18 MGP_CAROLIEiJ_G0028749 Timp4 (MGP_CAROLIEiJ_G0028750) #17 Pparg (MGP_CAROLIEiJ_G0028751) #19 Tsen2 (MGP_CAROLIEiJ_G0028752) #20 Mkrn2os (MGP_CAROLIEiJ_G0028753) #21 Mkrn2 (MGP_CAROLIEiJ_G0028754) #22 Raf1 (MGP_CAROLIEiJ_G0028755) #23 MGP_CAROLIEiJ_G0028756 #24 Cand2 (MGP_CAROLIEiJ_G0028757) #25 MGP_CAROLIEiJ_G0028758 ##26 Efcab12 (MGP_CAROLIEiJ_G0028759) #27 Mbd4 (MGP_CAROLIEiJ_G0028760) #28 Ift122 (MGP_CAROLIEiJ_G0028761) #29 Rho (MGP_CAROLIEiJ_G0028762) #30 H1f8 (MGP_CAROLIEiJ_G0028763) Plxnd1 (MGP_CAROLIEiJ_G0028764) #31 Tmcc1 (MGP_CAROLIEiJ_G0028765) #33 Washc2 (MGP_CAROLIEiJ_G0028766) Zfand4 (MGP_CAROLIEiJ_G0028767) MGP_CAROLIEiJ_G0028768 Marchf8 (MGP_CAROLIEiJ_G0028769) Shrew mouse MODERN SPECIES 11 Ghrl (MGP_PahariEiJ_G0022490) Sec13 (MGP_PahariEiJ_G0022491) Atp2b2 (MGP_PahariEiJ_G0022492) Slc6a11 (MGP_PahariEiJ_G0022493) Slc6a1 (MGP_PahariEiJ_G0022494) Hrh1 (MGP_PahariEiJ_G0022495) #11 Atg7 (MGP_PahariEiJ_G0022496) #12 Vgll4 (MGP_PahariEiJ_G0022497) #13 Tamm41 (MGP_PahariEiJ_G0022498) #14 Syn2 (MGP_PahariEiJ_G0022499) #18 MGP_PahariEiJ_G0022500 Timp4 (MGP_PahariEiJ_G0022501) #17 Pparg (MGP_PahariEiJ_G0022502) #19 Tsen2 (MGP_PahariEiJ_G0022503) #20 Mkrn2os (MGP_PahariEiJ_G0022504) #21 Mkrn2 (MGP_PahariEiJ_G0022505) #22 Raf1 (MGP_PahariEiJ_G0022506) #23 Tmem40 (MGP_PahariEiJ_G0022507) #24 Cand2 (MGP_PahariEiJ_G0022508) #25 MGP_PahariEiJ_G0022509 ##26 Efcab12 (MGP_PahariEiJ_G0022510) #27 MGP_PahariEiJ_G0022511 #28 Ift122 (MGP_PahariEiJ_G0022512) #29 Rho (MGP_PahariEiJ_G0022513) #30 H1f8 (MGP_PahariEiJ_G0022514) Plxnd1 (MGP_PahariEiJ_G0022515) #31 Tmcc1 (MGP_PahariEiJ_G0022516) #33 Washc2 (MGP_PahariEiJ_G0022517) MGP_PahariEiJ_G0022518 MGP_PahariEiJ_G0022519 Marchf8 (MGP_PahariEiJ_G0022520) Rat MODERN SPECIES 14 Slc6a1 (ENSRNOG00000006527) Hrh1 (ENSRNOG00000007420) #11 LOC120102367 (ENSRNOG00000067090) ENSRNOG00000069624 Atg7 (ENSRNOG00000007486) #12 Vgll4 (ENSRNOG00000007822) #13 Tamm41 (ENSRNOG00000007874) #14 Syn2 (ENSRNOG00000008157) #18 ENSRNOG00000067395 AC128901.1 (ENSRNOG00000028826) ENSRNOG00000069227 Timp4 (ENSRNOG00000007955) #17 Pparg (ENSRNOG00000008839) #19 Tsen2 (ENSRNOG00000060175) #20 Mkrn2os (ENSRNOG00000070957) #21 Mkrn2 (ENSRNOG00000009176) #22 Raf1 (ENSRNOG00000010153) #23 Tmem40 (ENSRNOG00000010430) #24 Cand2 (ENSRNOG00000010473) #25 Rpl32 (ENSRNOG00000010746) ##26 Efcab12 (ENSRNOG00000026176) #27 Mbd4 (ENSRNOG00000010919) #28 Ift122 (ENSRNOG00000010952) #29 Rho (ENSRNOG00000011144) #30 H1f8 (ENSRNOG00000025251) Plxnd1 (ENSRNOG00000025209) #31 AABR07061825.2 (ENSRNOG00000059964) Tmcc1 (ENSRNOG00000011614) #33 LOC680385 (ENSRNOG00000011606) Washc2c (ENSRNOG00000011653) Zfand4 (ENSRNOG00000011791) Upper Galilee mountains blind mole rat MODERN SPECIES 1707 Tatdn2 (ENSNGAG00000011523) Ghrl (ENSNGAG00000022045) Sec13 (ENSNGAG00000003425) Atp2b2 (ENSNGAG00000015473) Slc6a11 (ENSNGAG00000013842) Slc6a1 (ENSNGAG00000015663) Hrh1 (ENSNGAG00000021456) #11 ENSNGAG00000003030 Vgll4 (ENSNGAG00000013946) #13 Tamm41 (ENSNGAG00000013592) #14 Syn2 (ENSNGAG00000022266) #18 Timp4 (ENSNGAG00000021746) #17 Pparg (ENSNGAG00000014683) #19 ENSNGAG00000013561 #20 Mkrn2os (ENSNGAG00000019573) #21 Mkrn2 (ENSNGAG00000012579) #22 Raf1 (ENSNGAG00000019548) #23 Tmem40 (ENSNGAG00000021850) #24 Cand2 (ENSNGAG00000024002) #25 ENSNGAG00000024001 ##26 Efcab12 (ENSNGAG00000008314) #27 ENSNGAG00000017381 #28 Ift122 (ENSNGAG00000022462) #29 Rho (ENSNGAG00000020656) #30 H1f8 (ENSNGAG00000023630) Plxnd1 (ENSNGAG00000020476) #31 Tmcc1 (ENSNGAG00000010573) #33 Trh (ENSNGAG00000022332) #35 Rbsn (ENSNGAG00000022967) #36 Mrps25 (ENSNGAG00000021861) #37 Nr2c2 (ENSNGAG00000022501) Lesser Egyptian jerboa MODERN SPECIES 45 Sec13 (ENSJJAG00000023600) Atp2b2 (ENSJJAG00000009628) Slc6a11 (ENSJJAG00000008690) Slc6a1 (ENSJJAG00000013717) Hrh1 (ENSJJAG00000012905) #11 Atg7 (ENSJJAG00000021264) #12 Vgll4 (ENSJJAG00000017532) #13 Tamm41 (ENSJJAG00000015841) #14 Timp4 (ENSJJAG00000015654) #17 ENSJJAG00000015072 #18 ENSJJAG00000012036 Pparg (ENSJJAG00000023734) #19 ENSJJAG00000002861 #20 ENSJJAG00000015646 Mkrn2os (ENSJJAG00000022652) #21 Mkrn2 (ENSJJAG00000019765) #22 ENSJJAG00000016961 #23 Tmem40 (ENSJJAG00000009444) #24 Cand2 (ENSJJAG00000018247) #25 ENSJJAG00000021233 ##26 ENSJJAG00000016695 #28 Ift122 (ENSJJAG00000020288) #29 Rho (ENSJJAG00000022285) #30 ENSJJAG00000014828 Plxnd1 (ENSJJAG00000014069) #31 ENSJJAG00000020659 Tmcc1 (ENSJJAG00000019999) #33 ENSJJAG00000023012 #35 Rbsn (ENSJJAG00000024360) #36 Mrps25 (ENSJJAG00000013413) #37 Nr2c2 (ENSJJAG00000016580) Kangaroo rat MODERN SPECIES 331 Irak2 (ENSDORG00000012277) Tatdn2 (ENSDORG00000012279) Ghrl (ENSDORG00000012281) Sec13 (ENSDORG00000015327) Atp2b2 (ENSDORG00000015330) Slc6a11 (ENSDORG00000016390) Slc6a1 (ENSDORG00000016380) Atg7 (ENSDORG00000004380) #12 Vgll4 (ENSDORG00000004378) #13 Tamm41 (ENSDORG00000002091) #14 Timp4 (ENSDORG00000009509) #17 ENSDORG00000009507 #18 Pparg (ENSDORG00000003445) #19 Tsen2 (ENSDORG00000003395) #20 Mkrn2os (ENSDORG00000028573) #21 Mkrn2 (ENSDORG00000015621) #22 Raf1 (ENSDORG00000015622) #23 ENSDORG00000023579 #24 Cand2 (ENSDORG00000008424) #25 Rpl32 (ENSDORG00000008426) ##26 ENSDORG00000000902 #28 Ift122 (ENSDORG00000000906) #29 Rho (ENSDORG00000000911) #30 ENSDORG00000026967 Plxnd1 (ENSDORG00000000912) #31 Tmcc1 (ENSDORG00000026595) #33 Rbsn (ENSDORG00000009815) #36 Mrps25 (ENSDORG00000026838) #37 Nr2c2 (ENSDORG00000007038) Fgd5 (ENSDORG00000016297) 4930590J08Rik (ENSDORG00000007329) Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183077.a.b #22 Hedgehog MODERN SPECIES 7890 MKRN2 (ENSEEUG00000002217) #22 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT00930000152979 ENSGT00940000175447 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000186178 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 Carnivora ANCESTRAL SPECIES 6 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000009113.a.a.q.a.a ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000186178 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.a.b ##26 ENSGT00940000153973.c.a.b.b.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 Caniformia ANCESTRAL SPECIES 4 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000009113.a.a.q.a.a ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000186178 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 Caniformia_b ANCESTRAL SPECIES 16 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000009113.a.a.q.a.a ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000186178 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 Ursidae ANCESTRAL SPECIES 11 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000009113.a.a.q.a.a ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000186178 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b.d #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 Ursus ANCESTRAL SPECIES 43 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000009113.a.a.q.a.a ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b.c.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000012138.a.a.j.s.b ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b.d #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 American black bear MODERN SPECIES 4165 ENSUAMG00000023642 MKRN2 (ENSUAMG00000023641) #22 ENSUAMG00000022973 #23 Polar bear MODERN SPECIES 210 TATDN2 (ENSUMAG00000018632) GHRL (ENSUMAG00000018619) SEC13 (ENSUMAG00000018614) ATP2B2 (ENSUMAG00000018280) SLC6A11 (ENSUMAG00000018214) SLC6A1 (ENSUMAG00000017999) HRH1 (ENSUMAG00000017957) #11 ATG7 (ENSUMAG00000017892) #12 VGLL4 (ENSUMAG00000017868) #13 TAMM41 (ENSUMAG00000017859) #14 TIMP4 (ENSUMAG00000017853) #17 SYN2 (ENSUMAG00000017656) #18 PPARG (ENSUMAG00000017617) #19 TSEN2 (ENSUMAG00000017610) #20 MKRN2OS (ENSUMAG00000017608) #21 MKRN2 (ENSUMAG00000017606) #22 RAF1 (ENSUMAG00000017600) #23 TMEM40 (ENSUMAG00000017596) #24 CAND2 (ENSUMAG00000017566) #25 RPL32 (ENSUMAG00000017557) #26 EFCAB12 (ENSUMAG00000017549) #27 ENSUMAG00000017544 MBD4 (ENSUMAG00000017542) #28 IFT122 (ENSUMAG00000017522) #29 RHO (ENSUMAG00000017511) #30 PLXND1 (ENSUMAG00000017372) #31 TMCC1 (ENSUMAG00000017322) #33 TRH (ENSUMAG00000017316) #35 RBSN (ENSUMAG00000017308) #36 MRPS25 (ENSUMAG00000017301) #37 NR2C2 (ENSUMAG00000017295) Giant Panda MODERN SPECIES 14 TATDN2 (ENSAMEG00000016012) GHRL (ENSAMEG00000016009) SEC13 (ENSAMEG00000015994) ATP2B2 (ENSAMEG00000015866) SLC6A11 (ENSAMEG00000013958) SLC6A1 (ENSAMEG00000028234) HRH1 (ENSAMEG00000019211) #11 ATG7 (ENSAMEG00000013130) #12 VGLL4 (ENSAMEG00000011011) #13 TAMM41 (ENSAMEG00000010999) #14 SYN2 (ENSAMEG00000004794) #18 TIMP4 (ENSAMEG00000004836) #17 PPARG (ENSAMEG00000004774) #19 TSEN2 (ENSAMEG00000004748) #20 MKRN2OS (ENSAMEG00000004745) #21 MKRN2 (ENSAMEG00000004720) #22 RAF1 (ENSAMEG00000004650) #23 ENSAMEG00000025362 TMEM40 (ENSAMEG00000004646) #24 CAND2 (ENSAMEG00000004596) #25 RPL32 (ENSAMEG00000004583) ##26 ENSAMEG00000004574 #27 MBD4 (ENSAMEG00000004562) #28 ENSAMEG00000030948 IFT122 (ENSAMEG00000004471) #29 RHO (ENSAMEG00000004453) #30 H1-8 (ENSAMEG00000004448) PLXND1 (ENSAMEG00000004387) #31 TMCC1 (ENSAMEG00000004384) #33 TRH (ENSAMEG00000025033) #35 ENSAMEG00000004361 #36 Mustelinae ANCESTRAL SPECIES 18 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000186178 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 American mink MODERN SPECIES 287 SYN2 (ENSNVIG00000008362) #18 ENSNVIG00000008402 TIMP4 (ENSNVIG00000008416) #17 PPARG (ENSNVIG00000008444) #19 TSEN2 (ENSNVIG00000008550) #20 MKRN2OS (ENSNVIG00000008607) #21 MKRN2 (ENSNVIG00000008629) #22 RAF1 (ENSNVIG00000008700) #23 ENSNVIG00000008812 TMEM40 (ENSNVIG00000008852) #24 CAND2 (ENSNVIG00000008985) #25 ENSNVIG00000009040 ##26 EFCAB12 (ENSNVIG00000009088) #27 MBD4 (ENSNVIG00000009126) #28 IFT122 (ENSNVIG00000009217) #29 RHO (ENSNVIG00000009693) #30 H1-8 (ENSNVIG00000009706) PLXND1 (ENSNVIG00000009720) #31 TMCC1 (ENSNVIG00000009775) #33 TRH (ENSNVIG00000009787) #35 RBSN (ENSNVIG00000009795) #36 MRPS25 (ENSNVIG00000009805) #37 Ferret MODERN SPECIES 163 TATDN2 (ENSMPUG00000017160) SEC13 (ENSMPUG00000017161) ATP2B2 (ENSMPUG00000017163) ENSMPUG00000017167 SLC6A11 (ENSMPUG00000017168) SLC6A1 (ENSMPUG00000017170) HRH1 (ENSMPUG00000020115) #11 ATG7 (ENSMPUG00000017171) #12 VGLL4 (ENSMPUG00000017174) #13 TAMM41 (ENSMPUG00000017175) #14 SYN2 (ENSMPUG00000017176) #18 TIMP4 (ENSMPUG00000017178) #17 PPARG (ENSMPUG00000017181) #19 TSEN2 (ENSMPUG00000017182) #20 MKRN2OS (ENSMPUG00000017183) #21 MKRN2 (ENSMPUG00000017184) #22 RAF1 (ENSMPUG00000017185) #23 TMEM40 (ENSMPUG00000017187) #24 CAND2 (ENSMPUG00000017188) #25 ENSMPUG00000017189 ##26 EFCAB12 (ENSMPUG00000017190) #27 MBD4 (ENSMPUG00000017195) #28 IFT122 (ENSMPUG00000017197) #29 RHO (ENSMPUG00000017225) #30 ENSMPUG00000017237 PLXND1 (ENSMPUG00000017238) #31 ENSMPUG00000017241 TMCC1 (ENSMPUG00000017243) #33 TRH (ENSMPUG00000017246) #35 RBSN (ENSMPUG00000017247) #36 MRPS25 (ENSMPUG00000017248) #37 Canidae ANCESTRAL SPECIES ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00940000162517.e.b.b ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.a.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Canis_lupus ANCESTRAL SPECIES 1 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00940000162517.e.b.b ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.a.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00950000183087.A.a.a.b.p.a.a ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 Dingo MODERN SPECIES 236 SEC13 (ENSCAFG00020008342) ATP2B2 (ENSCAFG00020007890) SLC6A11 (ENSCAFG00020007842) SLC6A1 (ENSCAFG00020007634) HRH1 (ENSCAFG00020007622) #11 ATG7 (ENSCAFG00020007592) #12 VGLL4 (ENSCAFG00020007573) #13 ENSCAFG00020007566 TAMM41 (ENSCAFG00020007562) #14 TIMP4 (ENSCAFG00020007541) #17 SYN2 (ENSCAFG00020007281) #18 PPARG (ENSCAFG00020007261) #19 TSEN2 (ENSCAFG00020007250) #20 MKRN2OS (ENSCAFG00020007247) #21 ENSCAFG00020007244 MKRN2 (ENSCAFG00020007243) #22 RAF1 (ENSCAFG00020007230) #23 TMEM40 (ENSCAFG00020007225) #24 CAND2 (ENSCAFG00020007135) #25 RPL32 (ENSCAFG00020007109) ##26 EFCAB12 (ENSCAFG00020007096) #27 MBD4 (ENSCAFG00020007082) #28 IFT122 (ENSCAFG00020006537) #29 RHO (ENSCAFG00020006492) #30 H1-8 (ENSCAFG00020006486) PLXND1 (ENSCAFG00020006389) #31 ENSCAFG00020006372 #33 ENSCAFG00020006362 #33 ENSCAFG00020006358 ENSCAFG00020006352 TRH (ENSCAFG00020006350) #35 Dog MODERN SPECIES 12 SEC13 (ENSCAFG00845007748) ATP2B2 (ENSCAFG00845007221) SLC6A11 (ENSCAFG00845006781) SLC6A1 (ENSCAFG00845006668) HRH1 (ENSCAFG00845006605) #11 ATG7 (ENSCAFG00845006288) #12 VGLL4 (ENSCAFG00845006044) #13 ENSCAFG00845005976 TAMM41 (ENSCAFG00845005937) #14 TIMP4 (ENSCAFG00845029189) #17 SYN2 (ENSCAFG00845029109) #18 PPARG (ENSCAFG00845029007) #19 TSEN2 (ENSCAFG00845028923) #20 MKRN2OS (ENSCAFG00845028857) #21 ENSCAFG00845028837 MKRN2 (ENSCAFG00845028765) #22 ENSCAFG00845028720 RAF1 (ENSCAFG00845028676) #23 TMEM40 (ENSCAFG00845028589) #24 CAND2 (ENSCAFG00845028524) #25 RPL32 (ENSCAFG00845028446) ##26 ENSCAFG00845028379 #27 MBD4 (ENSCAFG00845028304) #28 IFT122 (ENSCAFG00845027707) #29 RHO (ENSCAFG00845027581) #30 H1-8 (ENSCAFG00845027541) PLXND1 (ENSCAFG00845026992) #31 RPL26 (ENSCAFG00845026761) TMCC1 (ENSCAFG00845026698) #33 ENSCAFG00845026667 TRH (ENSCAFG00845026628) #35 Red fox MODERN SPECIES 130 HRH1 (ENSVVUG00000015819) #11 ATG7 (ENSVVUG00000015693) #12 VGLL4 (ENSVVUG00000015675) #13 ENSVVUG00000015670 TAMM41 (ENSVVUG00000015667) #14 ENSVVUG00000015666 TIMP4 (ENSVVUG00000015655) #17 SYN2 (ENSVVUG00000015294) #18 ENSVVUG00000015270 PPARG (ENSVVUG00000015266) #19 TSEN2 (ENSVVUG00000015253) #20 ENSVVUG00000015251 #21 ENSVVUG00000015247 ENSVVUG00000015244 ENSVVUG00000015242 MKRN2 (ENSVVUG00000015240) #22 RAF1 (ENSVVUG00000015233) #23 ENSVVUG00000015228 CAND2 (ENSVVUG00000014272) #25 RPL32 (ENSVVUG00000014231) ##26 EFCAB12 (ENSVVUG00000014226) #27 MBD4 (ENSVVUG00000014222) #28 IFT122 (ENSVVUG00000014184) #29 RHO (ENSVVUG00000014149) #30 H1-8 (ENSVVUG00000014145) PLXND1 (ENSVVUG00000013916) #31 TMCC1 (ENSVVUG00000013886) #33 TRH (ENSVVUG00000013865) #35 RBSN (ENSVVUG00000013853) #36 MRPS25 (ENSVVUG00000013846) #37 ENSVVUG00000013842 Felidae ANCESTRAL SPECIES 17 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000009113.a.a.q.a.a ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Cat MODERN SPECIES 1 GHRL (ENSFCAG00000011244) SEC13 (ENSFCAG00000011245) ATP2B2 (ENSFCAG00000011247) SLC6A11 (ENSFCAG00000006043) SLC6A1 (ENSFCAG00000004345) HRH1 (ENSFCAG00000034897) #11 ATG7 (ENSFCAG00000003263) #12 VGLL4 (ENSFCAG00000003266) #13 TAMM41 (ENSFCAG00000030835) #14 SYN2 (ENSFCAG00000006229) #18 TIMP4 (ENSFCAG00000028966) #17 PPARG (ENSFCAG00000006231) #19 TSEN2 (ENSFCAG00000025500) #20 MKRN2OS (ENSFCAG00000046813) #21 ENSFCAG00000049119 MKRN2 (ENSFCAG00000007979) #22 RAF1 (ENSFCAG00000026299) #23 TMEM40 (ENSFCAG00000037003) #24 ENSFCAG00000052196 CAND2 (ENSFCAG00000008340) #25 RPL32 (ENSFCAG00000030450) ##26 EFCAB12 (ENSFCAG00000000081) #27 MBD4 (ENSFCAG00000000083) #28 IFT122 (ENSFCAG00000000086) #29 RHO (ENSFCAG00000000092) #30 H1-8 (ENSFCAG00000000094) PLXND1 (ENSFCAG00000000095) #31 TMCC1 (ENSFCAG00000027586) #33 TRH (ENSFCAG00000029423) #35 RBSN (ENSFCAG00000025901) #36 MRPS25 (ENSFCAG00000027687) #37 Panthera ANCESTRAL SPECIES 1 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000009113.a.a.q.a.a ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Tiger MODERN SPECIES 57 TATDN2 (ENSPTIG00000021381) GHRL (ENSPTIG00000020903) SEC13 (ENSPTIG00000019088) ATP2B2 (ENSPTIG00000016845) SLC6A11 (ENSPTIG00000016056) SLC6A1 (ENSPTIG00000015454) HRH1 (ENSPTIG00000005327) #11 ATG7 (ENSPTIG00000012782) #12 VGLL4 (ENSPTIG00000011766) #13 TAMM41 (ENSPTIG00000009439) #14 TIMP4 (ENSPTIG00000009274) #17 SYN2 (ENSPTIG00000005386) #18 PPARG (ENSPTIG00000021339) #19 TSEN2 (ENSPTIG00000021018) #20 MKRN2OS (ENSPTIG00000020689) #21 MKRN2 (ENSPTIG00000020261) #22 RAF1 (ENSPTIG00000019431) #23 TMEM40 (ENSPTIG00000016867) #24 CAND2 (ENSPTIG00000014551) #25 RPL32 (ENSPTIG00000013290) ##26 EFCAB12 (ENSPTIG00000012496) #27 ENSPTIG00000012068 #28 IFT122 (ENSPTIG00000017825) #29 RHO (ENSPTIG00000016846) #30 H1-8 (ENSPTIG00000016687) ENSPTIG00000016640 ENSPTIG00000016501 #33 Panthera_a ANCESTRAL SPECIES ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000009113.a.a.q.a.a ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 lion MODERN SPECIES 2 GHRL (ENSPLOG00000000147) SEC13 (ENSPLOG00000000172) ATP2B2 (ENSPLOG00000000482) SLC6A11 (ENSPLOG00000000895) SLC6A1 (ENSPLOG00000001048) HRH1 (ENSPLOG00000001150) #11 ATG7 (ENSPLOG00000001203) #12 ENSPLOG00000001305 VGLL4 (ENSPLOG00000001346) #13 TAMM41 (ENSPLOG00000001396) #14 SYN2 (ENSPLOG00000001422) #18 TIMP4 (ENSPLOG00000001454) #17 PPARG (ENSPLOG00000001496) #19 TSEN2 (ENSPLOG00000001594) #20 MKRN2OS (ENSPLOG00000001659) #21 MKRN2 (ENSPLOG00000001691) #22 RAF1 (ENSPLOG00000001743) #23 TMEM40 (ENSPLOG00000001779) #24 CAND2 (ENSPLOG00000001847) #25 RPL32 (ENSPLOG00000001870) ##26 EFCAB12 (ENSPLOG00000001903) #27 MBD4 (ENSPLOG00000002021) #28 IFT122 (ENSPLOG00000002159) #29 RHO (ENSPLOG00000002405) #30 H1-8 (ENSPLOG00000002423) PLXND1 (ENSPLOG00000002460) #31 TMCC1 (ENSPLOG00000002518) #33 TRH (ENSPLOG00000002548) #35 RBSN (ENSPLOG00000002563) #36 MRPS25 (ENSPLOG00000002725) #37 NR2C2 (ENSPLOG00000002757) leopard MODERN SPECIES 154 MKRN2OS (ENSPPRG00000021987) #21 MKRN2 (ENSPPRG00000021887) #22 RAF1 (ENSPPRG00000021390) #23 TMEM40 (ENSPPRG00000018566) #24 CAND2 (ENSPPRG00000017246) #25 RPL32 (ENSPPRG00000016964) ##26 EFCAB12 (ENSPPRG00000016816) #27 MBD4 (ENSPPRG00000016480) #28 IFT122 (ENSPPRG00000015865) #29 ENSPPRG00000014504 RHO (ENSPPRG00000014471) #30 H1-8 (ENSPPRG00000014444) PLXND1 (ENSPPRG00000014283) #31 TMCC1 (ENSPPRG00000014113) #33 TRH (ENSPPRG00000013952) #35 RBSN (ENSPPRG00000013941) #36 MRPS25 (ENSPPRG00000013901) #37 Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000186178 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.d ##26 ENSGT00940000153973.c.a.b.b.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 Equus ANCESTRAL SPECIES 5 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT01030000235208 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084.ab.a.b #23 ENSGT00950000186178 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.d ##26 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Horse MODERN SPECIES 7 ATP2B2 (ENSECAG00000023528) SLC6A11 (ENSECAG00000004220) SLC6A1 (ENSECAG00000000699) HRH1 (ENSECAG00000004544) #11 ENSECAG00000057850 ENSECAG00000048096 ATG7 (ENSECAG00000022756) #12 VGLL4 (ENSECAG00000039947) #13 TAMM41 (ENSECAG00000013860) #14 TIMP4 (ENSECAG00000011609) #17 SYN2 (ENSECAG00000049642) #18 PPARG (ENSECAG00000016664) #19 ENSECAG00000039510 TSEN2 (ENSECAG00000012813) #20 MKRN2OS (ENSECAG00000012416) MKRN2 (ENSECAG00000024404) #22 RAF1 (ENSECAG00000011807) #23 ENSECAG00000033555 TMEM40 (ENSECAG00000008940) #24 RPL32 (ENSECAG00000049946) ##26 CAND2 (ENSECAG00000010515) #25 MBD4 (ENSECAG00000022106) #28 IFT122 (ENSECAG00000015360) #29 RHO (ENSECAG00000013709) #30 H1-8 (ENSECAG00000013614) PLXND1 (ENSECAG00000009159) #31 TMCC1 (ENSECAG00000006725) #33 TRH (ENSECAG00000006178) #35 RBSN (ENSECAG00000021486) #36 MRPS25 (ENSECAG00000020841) #37 NR2C2 (ENSECAG00000003791) Donkey MODERN SPECIES 13 ATP2B2 (ENSEASG00005014293) ENSEASG00005034257 SLC6A11 (ENSEASG00005014295) SLC6A1 (ENSEASG00005014296) HRH1 (ENSEASG00005025266) #11 ATG7 (ENSEASG00005014298) #12 ENSEASG00005027051 VGLL4 (ENSEASG00005014301) #13 TAMM41 (ENSEASG00005014302) #14 SYN2 (ENSEASG00005014311) #18 TIMP4 (ENSEASG00005030754) #17 PPARG (ENSEASG00005014732) #19 TSEN2 (ENSEASG00005014763) #20 ENSEASG00005014772 MKRN2OS (ENSEASG00005035083) #21 MKRN2 (ENSEASG00005014776) #22 ENSEASG00005014777 #23 TMEM40 (ENSEASG00005033260) #24 ENSEASG00005025405 CAND2 (ENSEASG00005014788) #25 ENSEASG00005014792 ##26 MBD4 (ENSEASG00005014800) #28 IFT122 (ENSEASG00005014840) #29 RHO (ENSEASG00005015347) #30 H1-8 (ENSEASG00005025925) PLXND1 (ENSEASG00005015351) #31 TMCC1 (ENSEASG00005015373) #33 ENSEASG00005015376 #35 ENSEASG00005015384 #36 ENSEASG00005015419 #37 NR2C2 (ENSEASG00005015422) Chiroptera ANCESTRAL SPECIES 54 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Megabat MODERN SPECIES 1499 TSEN2 (ENSPVAG00000005820) #20 MKRN2 (ENSPVAG00000005822) #22 RAF1 (ENSPVAG00000005823) #23 TMEM40 (ENSPVAG00000005825) #24 CAND2 (ENSPVAG00000005826) #25 Microchiroptera ANCESTRAL SPECIES 16 ENSGT00940000155616.c.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Greater horseshoe bat MODERN SPECIES 8 TATDN2 (ENSRFEG00010010704) ENSRFEG00010010629 ENSRFEG00010010425 ATP2B2 (ENSRFEG00010019414) SLC6A11 (ENSRFEG00010019331) SLC6A1 (ENSRFEG00010019187) HRH1 (ENSRFEG00010019159) #11 ATG7 (ENSRFEG00010019096) #12 VGLL4 (ENSRFEG00010019005) #13 TAMM41 (ENSRFEG00010018912) #14 TIMP4 (ENSRFEG00010018875) #17 SYN2 (ENSRFEG00010018840) #18 PPARG (ENSRFEG00010018692) #19 TSEN2 (ENSRFEG00010018592) #20 MKRN2OS (ENSRFEG00010018565) #21 MKRN2 (ENSRFEG00010018469) #22 RAF1 (ENSRFEG00010018423) #23 TMEM40 (ENSRFEG00010018278) #24 CAND2 (ENSRFEG00010018212) #25 RPL32 (ENSRFEG00010018162) ##26 EFCAB12 (ENSRFEG00010018070) #27 MBD4 (ENSRFEG00010018007) #28 IFT122 (ENSRFEG00010017745) #29 RHO (ENSRFEG00010017659) #30 PLXND1 (ENSRFEG00010017592) #31 TMCC1 (ENSRFEG00010017473) #33 ENSRFEG00010017442 TRH (ENSRFEG00010017403) #35 RBSN (ENSRFEG00010017337) #36 MRPS25 (ENSRFEG00010017280) #37 ENSRFEG00010017258 Microbat MODERN SPECIES 945 TATDN2 (ENSMLUG00000004584) GHRL (ENSMLUG00000012014) SEC13 (ENSMLUG00000004901) ATP2B2 (ENSMLUG00000001467) ENSMLUG00000009590 SLC6A1 (ENSMLUG00000002027) HRH1 (ENSMLUG00000010552) #11 ATG7 (ENSMLUG00000010572) #12 VGLL4 (ENSMLUG00000010597) #13 TAMM41 (ENSMLUG00000015063) #14 TIMP4 (ENSMLUG00000006263) #17 SYN2 (ENSMLUG00000006253) #18 PPARG (ENSMLUG00000017638) #19 TSEN2 (ENSMLUG00000017641) #20 MKRN2OS (ENSMLUG00000024734) #21 MKRN2 (ENSMLUG00000017643) #22 RAF1 (ENSMLUG00000017645) #23 TMEM40 (ENSMLUG00000002835) #24 CAND2 (ENSMLUG00000006333) #25 RPL32 (ENSMLUG00000022528) ##26 ENSMLUG00000014759 #27 MBD4 (ENSMLUG00000014766) #28 IFT122 (ENSMLUG00000014771) #29 RHO (ENSMLUG00000014786) #30 ENSMLUG00000025226 PLXND1 (ENSMLUG00000014790) #31 TMCC1 (ENSMLUG00000016755) #33 TRH (ENSMLUG00000007249) #35 RBSN (ENSMLUG00000010088) #36 ENSMLUG00000017504 #37 NR2C2 (ENSMLUG00000010062) Artiodactyla ANCESTRAL SPECIES 2 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.d ##26 ENSGT00940000153973.c.a.b.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT01010000229800 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT00930000152979 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 Artiodactyla_a ANCESTRAL SPECIES 18 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT01010000229800 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT00940000175447 ENSGT00930000152979 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 Camelidae ANCESTRAL SPECIES 7 ENSGT00940000155616.c.a.a ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000175447 ENSGT00930000152979 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 Arabian camel MODERN SPECIES 8 TATDN2 (ENSCDRG00005015003) GHRL (ENSCDRG00005015107) SEC13 (ENSCDRG00005015206) ATP2B2 (ENSCDRG00005015469) SLC6A11 (ENSCDRG00005015983) SLC6A1 (ENSCDRG00005016134) HRH1 (ENSCDRG00005016405) #11 ATG7 (ENSCDRG00005016438) #12 VGLL4 (ENSCDRG00005016647) #13 TAMM41 (ENSCDRG00005016988) #14 SYN2 (ENSCDRG00005017059) #18 TIMP4 (ENSCDRG00005017087) #17 PPARG (ENSCDRG00005017141) #19 TSEN2 (ENSCDRG00005017293) #20 MKRN2OS (ENSCDRG00005017382) #21 MKRN2 (ENSCDRG00005017406) #22 RAF1 (ENSCDRG00005017576) #23 TMEM40 (ENSCDRG00005017673) #24 CAND2 (ENSCDRG00005017872) #25 ENSCDRG00005018038 ##26 EFCAB12 (ENSCDRG00005018119) #27 MBD4 (ENSCDRG00005018206) #28 IFT122 (ENSCDRG00005018267) #29 RHO (ENSCDRG00005018442) #30 ENSCDRG00005018477 ENSCDRG00005018504 ENSCDRG00005018533 #31 PLXND1 (ENSCDRG00005018551) #31 TMCC1 (ENSCDRG00005018594) #33 TRH (ENSCDRG00005003364) #35 RBSN (ENSCDRG00005003390) #36 Alpaca MODERN SPECIES 1304 ENSVPAG00000011052 #18 TIMP4 (ENSVPAG00000011058) #17 PPARG (ENSVPAG00000011059) #19 ENSVPAG00000011061 #20 MKRN2 (ENSVPAG00000011064) #22 RAF1 (ENSVPAG00000011066) #23 TMEM40 (ENSVPAG00000011071) #24 Artiodactyla_b ANCESTRAL SPECIES 21 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT01010000229800 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT00930000152979 ENSGT00940000175447 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 Pecora ANCESTRAL SPECIES 17 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Yarkand deer MODERN SPECIES 16 XPC (ENSCHYG00000023838) LSM3 (ENSCHYG00000023916) SLC6A6 (ENSCHYG00000023942) GRIP2 (ENSCHYG00000024067) ENSCHYG00000024372 C3orf20 (ENSCHYG00000024531) FGD5 (ENSCHYG00000024639) NR2C2 (ENSCHYG00000024864) ENSCHYG00000025047 #37 RBSN (ENSCHYG00000025089) #36 ENSCHYG00000025128 #18 TIMP4 (ENSCHYG00000025170) #17 PPARG (ENSCHYG00000025198) #19 TSEN2 (ENSCHYG00000025333) #20 MKRN2OS (ENSCHYG00000025406) #21 MKRN2 (ENSCHYG00000025428) #22 RAF1 (ENSCHYG00000025496) #23 ENSCHYG00000013805 TMEM40 (ENSCHYG00000013848) #24 CAND2 (ENSCHYG00000014141) #25 ENSCHYG00000014472 ENSCHYG00000014488 ##26 EFCAB12 (ENSCHYG00000014606) #27 MBD4 (ENSCHYG00000014755) #28 IFT122 (ENSCHYG00000015047) #29 RHO (ENSCHYG00000017188) #30 H1-8 (ENSCHYG00000017241) ENSCHYG00000017294 #31 TMCC1 (ENSCHYG00000017484) #33 TRH (ENSCHYG00000017738) #35 TAMM41 (ENSCHYG00000017796) #14 Percora_a ANCESTRAL SPECIES 19 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Siberian musk deer MODERN SPECIES 1221 TMEM42 (ENSMMSG00000018480) ENSMMSG00000018446 SEC13 (ENSMMSG00000018353) ATP2B2 (ENSMMSG00000015764) SLC6A11 (ENSMMSG00000015601) SLC6A1 (ENSMMSG00000015486) HRH1 (ENSMMSG00000015454) #11 ATG7 (ENSMMSG00000015338) #12 VGLL4 (ENSMMSG00000015264) #13 TAMM41 (ENSMMSG00000015235) #14 TIMP4 (ENSMMSG00000015209) #17 SYN2 (ENSMMSG00000015141) #18 PPARG (ENSMMSG00000015004) #19 TSEN2 (ENSMMSG00000014963) #20 MKRN2OS (ENSMMSG00000014926) #21 MKRN2 (ENSMMSG00000014895) #22 RAF1 (ENSMMSG00000024157) #23 TMEM40 (ENSMMSG00000024144) #24 CAND2 (ENSMMSG00000024132) #25 RPL32 (ENSMMSG00000024124) ##26 EFCAB12 (ENSMMSG00000024116) #27 MBD4 (ENSMMSG00000024114) #28 IFT122 (ENSMMSG00000024092) #29 RHO (ENSMMSG00000024086) #30 ENSMMSG00000024082 PLXND1 (ENSMMSG00000024073) #31 TMCC1 (ENSMMSG00000024064) #33 ENSMMSG00000024063 TRH (ENSMMSG00000024061) #35 RBSN (ENSMMSG00000024056) #36 MRPS25 (ENSMMSG00000024052) #37 Bovidae ANCESTRAL SPECIES 19 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 ENSGT00440000033958 ENSGT00940000153655.B ENSGT00940000157922 ENSGT00940000158393 ENSGT00640000091558 #37 ENSGT00390000007159 #36 ENSGT00390000000616.l #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000000616.k #14 ENSGT00390000003282.B #13 ENSGT00390000017509 #12 Caprinae ANCESTRAL SPECIES 15 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 ENSGT00440000033958 ENSGT00940000153655.B ENSGT00940000157922 ENSGT00940000158393 ENSGT00640000091558 #37 ENSGT00390000007159 #36 ENSGT00390000000616.l #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000000616.k #14 ENSGT00390000003282.B #13 ENSGT00390000017509 #12 Rambouillet Sheep MODERN SPECIES 10 CHCHD4 (ENSOARG00020025962) TMEM43 (ENSOARG00020025957) ENSOARG00020025950 SLC6A6 (ENSOARG00020025943) GRIP2 (ENSOARG00020025919) CCDC174 (ENSOARG00020025904) C3orf20 (ENSOARG00020025893) NR2C2 (ENSOARG00020025878) MRPS25 (ENSOARG00020025871) #37 RBSN (ENSOARG00020025862) #36 ENSOARG00020025856 #17 SYN2 (ENSOARG00020025846) #18 PPARG (ENSOARG00020025834) #19 TSEN2 (ENSOARG00020025828) #20 MKRN2OS (ENSOARG00020025824) #21 MKRN2 (ENSOARG00020025818) #22 RAF1 (ENSOARG00020025810) #23 TMEM40 (ENSOARG00020025803) #24 CAND2 (ENSOARG00020025794) #25 RPL32 (ENSOARG00020025785) ##26 EFCAB12 (ENSOARG00020025775) #27 MBD4 (ENSOARG00020025769) #28 IFT122 (ENSOARG00020025765) #29 RHO (ENSOARG00020025763) #30 ENSOARG00020025760 PLXND1 (ENSOARG00020025735) #31 TMCC1 (ENSOARG00020025721) #33 TRH (ENSOARG00020025716) #35 TAMM41 (ENSOARG00020025710) #14 ENSOARG00020025707 VGLL4 (ENSOARG00020025701) #13 Goat MODERN SPECIES 14 LSM3 (ENSCHIG00000024650) SLC6A6 (ENSCHIG00000024785) GRIP2 (ENSCHIG00000016620) CCDC174 (ENSCHIG00000008286) C3orf20 (ENSCHIG00000009719) FGD5 (ENSCHIG00000023792) NR2C2 (ENSCHIG00000008676) MRPS25 (ENSCHIG00000009931) #37 RBSN (ENSCHIG00000019361) #36 ENSCHIG00000027078 #14 TIMP4 (ENSCHIG00000017995) #17 SYN2 (ENSCHIG00000024912) #18 PPARG (ENSCHIG00000015877) #19 TSEN2 (ENSCHIG00000013772) #20 MKRN2OS (ENSCHIG00000013445) #21 MKRN2 (ENSCHIG00000021098) #22 RAF1 (ENSCHIG00000006954) #23 CAND2 (ENSCHIG00000017799) #25 RPL32 (ENSCHIG00000011099) ##26 EFCAB12 (ENSCHIG00000024180) #27 MBD4 (ENSCHIG00000009760) #28 IFT122 (ENSCHIG00000018009) #29 RHO (ENSCHIG00000019086) #30 H1-8 (ENSCHIG00000015286) PLXND1 (ENSCHIG00000008763) #31 ENSCHIG00000016746 #33 ENSCHIG00000015861 #33 TRH (ENSCHIG00000025325) #35 ENSCHIG00000002443 #14 VGLL4 (ENSCHIG00000019976) #13 ATG7 (ENSCHIG00000018813) #12 Bovinae ANCESTRAL SPECIES 16 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 ENSGT00440000033958 ENSGT00940000153655.B ENSGT00940000157922 ENSGT00940000158393 ENSGT00640000091558 #37 ENSGT00390000007159 #36 ENSGT00390000000616.l #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000000616.k #14 Bos ANCESTRAL SPECIES 16 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 ENSGT00440000033958 ENSGT00940000153655.B ENSGT00940000157922 ENSGT00940000158393 ENSGT00640000091558 #37 ENSGT00390000007159 #36 ENSGT00390000000616.l #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000000616.k #14 Bos_a ANCESTRAL SPECIES 9 ENSGT00390000009671 ENSGT00390000005194 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 ENSGT00440000033958 ENSGT00940000153655.B ENSGT00940000157922 ENSGT00940000158393 ENSGT00640000091558 #37 ENSGT00390000007159 #36 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT00940000175447 ENSGT00930000152979 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000000616.k #14 ENSGT00390000003282.B #13 Wild yak MODERN SPECIES 1473 ENSBMUG00000011252 #17 SYN2 (ENSBMUG00000011214) #18 PPARG (ENSBMUG00000011177) #19 MKRN2OS (ENSBMUG00000011070) #21 MKRN2 (ENSBMUG00000011049) #22 RAF1 (ENSBMUG00000011029) #23 ENSBMUG00000010983 TMEM40 (ENSBMUG00000010953) #24 CAND2 (ENSBMUG00000010855) #25 RPL32 (ENSBMUG00000010768) ##26 EFCAB12 (ENSBMUG00000010745) #27 MBD4 (ENSBMUG00000010711) #28 IFT122 (ENSBMUG00000010042) #29 RHO (ENSBMUG00000009767) #30 ENSBMUG00000009729 ENSBMUG00000009719 TMCC1 (ENSBMUG00000009638) #33 ENSBMUG00000009609 TRH (ENSBMUG00000009602) #35 Domestic yak MODERN SPECIES 14 TMEM43 (ENSBGRG00000018668) XPC (ENSBGRG00000018846) ENSBGRG00000019432 SLC6A6 (ENSBGRG00000019545) GRIP2 (ENSBGRG00000020144) CCDC174 (ENSBGRG00000021048) C3orf20 (ENSBGRG00000021321) FGD5 (ENSBGRG00000021386) NR2C2 (ENSBGRG00000021614) MRPS25 (ENSBGRG00000021676) #37 RBSN (ENSBGRG00000021762) #36 SYN2 (ENSBGRG00000021920) #18 TIMP4 (ENSBGRG00000022226) #17 ENSBGRG00000022315 #19 MKRN2OS (ENSBGRG00000022696) #21 MKRN2 (ENSBGRG00000022735) #22 RAF1 (ENSBGRG00000022891) #23 TMEM40 (ENSBGRG00000023210) #24 CAND2 (ENSBGRG00000023333) #25 RPL32 (ENSBGRG00000023548) ##26 EFCAB12 (ENSBGRG00000023675) #27 MBD4 (ENSBGRG00000023851) #28 IFT122 (ENSBGRG00000023990) #29 RHO (ENSBGRG00000024373) #30 ENSBGRG00000024409 ENSBGRG00000024437 ENSBGRG00000024462 TMCC1 (ENSBGRG00000024493) #33 ENSBGRG00000024583 TRH (ENSBGRG00000024598) #35 TAMM41 (ENSBGRG00000024630) #14 Bos_b ANCESTRAL SPECIES 17 ENSGT00390000013951 ENSGT00940000154583 ENSGT00940000155615 ENSGT00440000033958 ENSGT00940000153655.B ENSGT00940000157922 ENSGT00940000158393 ENSGT00640000091558 #37 ENSGT00390000007159 #36 ENSGT00390000000616.l #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.d ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000000616.k #14 ENSGT00390000003282.B #13 ENSGT00390000017509 #12 Hybrid Bos Indicus MODERN SPECIES 14 LSM3 (ENSBIXG00005027836) SLC6A6 (ENSBIXG00005027782) GRIP2 (ENSBIXG00005027668) ENSBIXG00005027488 ENSBIXG00005027475 CCDC174 (ENSBIXG00005027454) C3orf20 (ENSBIXG00005027421) FGD5 (ENSBIXG00005027347) NR2C2 (ENSBIXG00005026766) MRPS25 (ENSBIXG00005026733) #37 RBSN (ENSBIXG00005026693) #36 SYN2 (ENSBIXG00005026582) #18 TIMP4 (ENSBIXG00005026516) #17 ENSBIXG00005026465 #19 MKRN2OS (ENSBIXG00005026155) #21 MKRN2 (ENSBIXG00005026143) #22 RAF1 (ENSBIXG00005004450) #23 TMEM40 (ENSBIXG00005026020) #24 CAND2 (ENSBIXG00005025955) #25 RPL32 (ENSBIXG00005025898) ##26 MBD4 (ENSBIXG00005025831) #28 IFT122 (ENSBIXG00005025735) #29 RHO (ENSBIXG00005025616) #30 ENSBIXG00005025593 PLXND1 (ENSBIXG00005025560) #31 TMCC1 (ENSBIXG00005025216) #33 ENSBIXG00005025137 ENSBIXG00005025108 TRH (ENSBIXG00005025098) #35 ENSBIXG00005025048 #13 ATG7 (ENSBIXG00005024877) #12 Cow MODERN SPECIES 14 LSM3 (ENSBTAG00000007363) SLC6A6 (ENSBTAG00000011088) GRIP2 (ENSBTAG00000011896) CCDC174 (ENSBTAG00000038298) C22H3orf20 (ENSBTAG00000040133) FGD5 (ENSBTAG00000006789) NR2C2 (ENSBTAG00000013716) MRPS25 (ENSBTAG00000013723) #37 RBSN (ENSBTAG00000013725) #36 ENSBTAG00000031115 #14 TIMP4 (ENSBTAG00000020263) #17 SYN2 (ENSBTAG00000020260) #18 PPARG (ENSBTAG00000001333) #19 TSEN2 (ENSBTAG00000037980) #20 MKRN2OS (ENSBTAG00000024991) #21 MKRN2 (ENSBTAG00000004512) #22 RAF1 (ENSBTAG00000045748) #23 TMEM40 (ENSBTAG00000000161) #24 CAND2 (ENSBTAG00000015273) #25 RPL32 (ENSBTAG00000015283) ##26 EFCAB12 (ENSBTAG00000021643) #27 MBD4 (ENSBTAG00000021645) #28 IFT122 (ENSBTAG00000019121) #29 RHO (ENSBTAG00000001310) #30 H1-8 (ENSBTAG00000001812) PLXND1 (ENSBTAG00000001814) #31 TMCC1 (ENSBTAG00000006614) #33 TRH (ENSBTAG00000005306) #35 TAMM41 (ENSBTAG00000003328) #14 VGLL4 (ENSBTAG00000018600) #13 ATG7 (ENSBTAG00000035827) #12 American bison MODERN SPECIES 3340 TMEM43 (ENSBBBG00000010956) XPC (ENSBBBG00000001954) LSM3 (ENSBBBG00000007967) SLC6A6 (ENSBBBG00000010987) GRIP2 (ENSBBBG00000011088) CCDC174 (ENSBBBG00000002003) C3orf20 (ENSBBBG00000011153) NR2C2 (ENSBBBG00000011226) MRPS25 (ENSBBBG00000011234) #37 RBSN (ENSBBBG00000011250) #36 TIMP4 (ENSBBBG00000011264) #17 SYN2 (ENSBBBG00000011280) #18 PPARG (ENSBBBG00000011336) #19 TSEN2 (ENSBBBG00000002087) #20 MKRN2OS (ENSBBBG00000006934) #21 MKRN2 (ENSBBBG00000011440) #22 RAF1 (ENSBBBG00000011493) #23 TMEM40 (ENSBBBG00000011569) #24 CAND2 (ENSBBBG00000002144) #25 RPL32 (ENSBBBG00000002148) ##26 EFCAB12 (ENSBBBG00000011681) #27 MBD4 (ENSBBBG00000011698) #28 IFT122 (ENSBBBG00000002240) #29 RHO (ENSBBBG00000012003) #30 ENSBBBG00000012007 ENSBBBG00000012012 TMCC1 (ENSBBBG00000012034) #33 ENSBBBG00000012036 TRH (ENSBBBG00000012040) #35 TAMM41 (ENSBBBG00000012063) #14 VGLL4 (ENSBBBG00000012100) #13 Cetacea ANCESTRAL SPECIES 7 ENSGT00940000155616.c.a.a ENSGT00390000004064 ENSGT00940000153393.B.`b ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT01010000229800 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT00930000152979 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 Odontoceti ANCESTRAL SPECIES 5 ENSGT00940000155616.c.a.a ENSGT00390000004064 ENSGT00940000153393.B.`b ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT00930000152979 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558.n #37 Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00940000155616.c.a.a ENSGT00390000004064 ENSGT00940000153393.B.`b ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558.n #37 ENSGT00940000158393 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00940000155616.c.a.a ENSGT00390000004064 ENSGT00940000153393.B.`b ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558.n #37 ENSGT00940000158393 Monodontidae ANCESTRAL SPECIES 4 ENSGT00940000155616.c.a.a ENSGT00390000004064 ENSGT00940000153393.B.`b ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558.n #37 ENSGT00940000158393 Beluga whale MODERN SPECIES 66 IRAK2 (ENSDLEG00000014959) ENSDLEG00000014979 ENSDLEG00000014986 GHRL (ENSDLEG00000015002) SEC13 (ENSDLEG00000015045) ATP2B2 (ENSDLEG00000015650) SLC6A11 (ENSDLEG00000021059) SLC6A1 (ENSDLEG00000021420) HRH1 (ENSDLEG00000021424) #11 ATG7 (ENSDLEG00000021427) #12 TAMM41 (ENSDLEG00000021438) #14 SYN2 (ENSDLEG00000021448) #18 TIMP4 (ENSDLEG00000021450) #17 ENSDLEG00000021458 #19 ENSDLEG00000021477 MKRN2 (ENSDLEG00000021478) #22 RAF1 (ENSDLEG00000007956) #23 TMEM40 (ENSDLEG00000008007) #24 CAND2 (ENSDLEG00000008059) #25 RPL32 (ENSDLEG00000008175) ##26 ENSDLEG00000008201 #27 MBD4 (ENSDLEG00000008239) #28 IFT122 (ENSDLEG00000008304) #29 RHO (ENSDLEG00000008470) #30 H1-8 (ENSDLEG00000008521) PLXND1 (ENSDLEG00000008614) #31 TMCC1 (ENSDLEG00000008842) #33 TRH (ENSDLEG00000008893) #35 RBSN (ENSDLEG00000008914) #36 ENSDLEG00000008956 #37 ENSDLEG00000008967 #37 Narwhal MODERN SPECIES 310 GHRL (ENSMMNG00015011143) SEC13 (ENSMMNG00015011196) ATP2B2 (ENSMMNG00015011282) ENSMMNG00015011333 SLC6A11 (ENSMMNG00015011359) SLC6A1 (ENSMMNG00015011419) HRH1 (ENSMMNG00015011469) #11 ATG7 (ENSMMNG00015011505) #12 VGLL4 (ENSMMNG00015011616) #13 TAMM41 (ENSMMNG00015011672) #14 SYN2 (ENSMMNG00015011708) #18 TIMP4 (ENSMMNG00015011737) #17 PPARG (ENSMMNG00015011771) #19 TSEN2 (ENSMMNG00015011810) #20 MKRN2OS (ENSMMNG00015011881) #21 MKRN2 (ENSMMNG00015011904) #22 RAF1 (ENSMMNG00015011951) #23 TMEM40 (ENSMMNG00015012000) #24 CAND2 (ENSMMNG00015012039) #25 RPL32 (ENSMMNG00015012118) ##26 EFCAB12 (ENSMMNG00015012144) #27 MBD4 (ENSMMNG00015012156) #28 IFT122 (ENSMMNG00015012203) #29 RHO (ENSMMNG00015012293) #30 H1-8 (ENSMMNG00015012313) PLXND1 (ENSMMNG00015012370) #31 TMCC1 (ENSMMNG00015012483) #33 TRH (ENSMMNG00015012517) #35 RBSN (ENSMMNG00015012525) #36 ENSMMNG00015012540 #37 NR2C2 (ENSMMNG00015012595) Vaquita MODERN SPECIES 2 TATDN2 (ENSPSNG00000016441) GHRL (ENSPSNG00000016272) ENSPSNG00000015998 ATP2B2 (ENSPSNG00000013827) SLC6A11 (ENSPSNG00000013275) SLC6A1 (ENSPSNG00000012418) HRH1 (ENSPSNG00000012320) #11 ATG7 (ENSPSNG00000011678) #12 VGLL4 (ENSPSNG00000011411) #13 TAMM41 (ENSPSNG00000011313) #14 TIMP4 (ENSPSNG00000011214) #17 SYN2 (ENSPSNG00000010964) #18 PPARG (ENSPSNG00000010554) #19 TSEN2 (ENSPSNG00000010460) #20 MKRN2OS (ENSPSNG00000010409) #21 MKRN2 (ENSPSNG00000010288) #22 RAF1 (ENSPSNG00000010184) #23 TMEM40 (ENSPSNG00000010002) #24 CAND2 (ENSPSNG00000009832) #25 RPL32 (ENSPSNG00000022724) ##26 EFCAB12 (ENSPSNG00000022723) #27 MBD4 (ENSPSNG00000022722) #28 IFT122 (ENSPSNG00000022721) #29 RHO (ENSPSNG00000022720) #30 H1-8 (ENSPSNG00000022719) PLXND1 (ENSPSNG00000022718) #31 ENSPSNG00000022717 #33 ENSPSNG00000022714 #33 TRH (ENSPSNG00000022713) #35 RBSN (ENSPSNG00000022712) #36 ENSPSNG00000022711 #37 Sperm whale MODERN SPECIES 9 ENSPCTG00005007736 IRAK2 (ENSPCTG00005007701) TATDN2 (ENSPCTG00005007678) GHRL (ENSPCTG00005007648) SEC13 (ENSPCTG00005007576) SLC6A11 (ENSPCTG00005007501) SLC6A1 (ENSPCTG00005006885) HRH1 (ENSPCTG00005006823) #11 ATG7 (ENSPCTG00005006565) #12 VGLL4 (ENSPCTG00005006432) #13 TAMM41 (ENSPCTG00005006384) #14 TIMP4 (ENSPCTG00005006355) #17 SYN2 (ENSPCTG00005006330) #18 PPARG (ENSPCTG00005006236) #19 MKRN2OS (ENSPCTG00005006199) #21 MKRN2 (ENSPCTG00005006141) #22 RAF1 (ENSPCTG00005006081) #23 ENSPCTG00005006042 #25 ENSPCTG00005006016 ##26 EFCAB12 (ENSPCTG00005005960) #27 MBD4 (ENSPCTG00005005918) #28 IFT122 (ENSPCTG00005005825) #29 RHO (ENSPCTG00005005781) #30 H1-8 (ENSPCTG00005005747) ENSPCTG00005005647 ENSPCTG00005005684 #31 TRH (ENSPCTG00005005621) #35 ENSPCTG00005005601 TMCC1 (ENSPCTG00005005558) #33 RBSN (ENSPCTG00005005519) #36 MRPS25 (ENSPCTG00005005475) #37 Blue whale DUPLICATION Blue whale MODERN SPECIES ENSBMSG00010001698 IFFO2 (ENSBMSG00010001679) ALDH4A1 (ENSBMSG00010001659) TAS1R2 (ENSBMSG00010001618) PAX7 (ENSBMSG00010001523) KLHDC7A (ENSBMSG00010001507) IGSF21 (ENSBMSG00010001491) ACTL8 (ENSBMSG00010001478) ARHGEF10L (ENSBMSG00010001332) RCC2 (ENSBMSG00010001248) PADI6 (ENSBMSG00010001172) PADI4 (ENSBMSG00010001111) PADI1 (ENSBMSG00010001060) PADI2 (ENSBMSG00010001016) ENSBMSG00010000986 ENSBMSG00010000977 #22 SDHB (ENSBMSG00010000950) ENSBMSG00010000692 MFAP2 (ENSBMSG00010000626) CROCC (ENSBMSG00010000545) NECAP2 (ENSBMSG00010000450) SPATA21 (ENSBMSG00010000388) SZRD1 (ENSBMSG00010000357) FBXO42 (ENSBMSG00010000326) CPLANE2 (ENSBMSG00010000300) ARHGEF19 (ENSBMSG00010000217) EPHA2 (ENSBMSG00010000136) FAM131C (ENSBMSG00010000090) ENSBMSG00010000048 HSPB7 (ENSBMSG00010000026) SRARP (ENSBMSG00010000016) Blue whale MODERN SPECIES 2 SEC13 (ENSBMSG00010008420) ATP2B2 (ENSBMSG00010008618) SLC6A11 (ENSBMSG00010009702) SLC6A1 (ENSBMSG00010009806) ENSBMSG00010009900 HRH1 (ENSBMSG00010009905) #11 ATG7 (ENSBMSG00010009931) #12 ENSBMSG00010009994 #13 ENSBMSG00010010031 TAMM41 (ENSBMSG00010010044) #14 SYN2 (ENSBMSG00010010076) #18 TIMP4 (ENSBMSG00010010106) #17 PPARG (ENSBMSG00010010135) #19 TSEN2 (ENSBMSG00010010317) #20 MKRN2OS (ENSBMSG00010010343) #21 MKRN2 (ENSBMSG00010010365) #22 RAF1 (ENSBMSG00010010408) #23 TMEM40 (ENSBMSG00010010438) #24 CAND2 (ENSBMSG00010010467) #25 RPL32 (ENSBMSG00010010483) ##26 EFCAB12 (ENSBMSG00010010503) #27 ENSBMSG00010010533 #28 ENSBMSG00010010542 IFT122 (ENSBMSG00010010593) #29 RHO (ENSBMSG00010010727) #30 ENSBMSG00010010803 PLXND1 (ENSBMSG00010010833) #31 TMCC1 (ENSBMSG00010010919) #33 TRH (ENSBMSG00010010946) #35 RBSN (ENSBMSG00010010963) #36 MRPS25 (ENSBMSG00010010976) #37 Suina ANCESTRAL SPECIES 1 ENSGT00940000153393.B ENSGT00910000147252 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.b.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT01010000229800 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 Chacoan peccary MODERN SPECIES 950 SEC13 (ENSCWAG00000021789) ENSCWAG00000011861 ATP2B2 (ENSCWAG00000012003) SLC6A11 (ENSCWAG00000015415) SLC6A1 (ENSCWAG00000015592) HRH1 (ENSCWAG00000016580) #11 ATG7 (ENSCWAG00000016602) #12 VGLL4 (ENSCWAG00000016758) #13 ENSCWAG00000016872 TAMM41 (ENSCWAG00000016892) #14 SYN2 (ENSCWAG00000016935) #18 TIMP4 (ENSCWAG00000017007) #17 PPARG (ENSCWAG00000017057) #19 TSEN2 (ENSCWAG00000017441) #20 ENSCWAG00000017774 MKRN2 (ENSCWAG00000017797) #22 RAF1 (ENSCWAG00000017888) #23 TMEM40 (ENSCWAG00000017953) #24 CAND2 (ENSCWAG00000018031) #25 RPL32 (ENSCWAG00000018094) ##26 EFCAB12 (ENSCWAG00000018153) #27 ENSCWAG00000018222 #28 ENSCWAG00000018236 #28 ENSCWAG00000018255 IFT122 (ENSCWAG00000018289) #29 RHO (ENSCWAG00000018568) #30 H1-8 (ENSCWAG00000018609) PLXND1 (ENSCWAG00000018660) #31 TMCC1 (ENSCWAG00000018870) #33 TRH (ENSCWAG00000018918) #35 RBSN (ENSCWAG00000018943) #36 Pig MODERN SPECIES 4 GHRL (ENSSSCG00000011568) SEC13 (ENSSSCG00000011572) ATP2B2 (ENSSSCG00000023084) SLC6A11 (ENSSSCG00000039850) SLC6A1 (ENSSSCG00000011577) HRH1 (ENSSSCG00000011576) #11 ATG7 (ENSSSCG00000011575) #12 VGLL4 (ENSSSCG00000030581) #13 TAMM41 (ENSSSCG00000011578) #14 SYN2 (ENSSSCG00000023225) #18 TIMP4 (ENSSSCG00000033000) #17 PPARG (ENSSSCG00000011579) #19 TSEN2 (ENSSSCG00000011580) #20 MKRN2OS (ENSSSCG00000011581) #21 ENSSSCG00000045850 MKRN2 (ENSSSCG00000029877) #22 RAF1 (ENSSSCG00000024453) #23 ENSSSCG00000056163 TMEM40 (ENSSSCG00000011583) #24 CAND2 (ENSSSCG00000011582) #25 RPL32 (ENSSSCG00000035811) ##26 EFCAB12 (ENSSSCG00000011587) #27 MBD4 (ENSSSCG00000033303) #28 IFT122 (ENSSSCG00000011589) #29 RHO (ENSSSCG00000011590) #30 H1-8 (ENSSSCG00000011591) PLXND1 (ENSSSCG00000011592) #31 TMCC1 (ENSSSCG00000011593) #33 ENSSSCG00000040441 ENSSSCG00000044894 TRH (ENSSSCG00000055507) #35 Atlantogenata ANCESTRAL SPECIES 34 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00940000153973.c.a.b.b ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 Afrotheria ANCESTRAL SPECIES 32 ENSGT00390000011082 ENSGT00390000014353 ENSGT00940000159835 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Tenrec MODERN SPECIES 7278 MKRN2 (ENSETEG00000003970) #22 RAF1 (ENSETEG00000003974) #23 Afrotheria_a ANCESTRAL SPECIES 32 ENSGT00940000159835 ENSGT00940000155616 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973.c.a.a ##26 ENSGT00390000014874 #27 ENSGT00530000063687.a #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Hyrax MODERN SPECIES 10043 MKRN2 (ENSPCAG00000016175) #22 RAF1 (ENSPCAG00000016080) #23 Elephant MODERN SPECIES 49 IRAK2 (ENSLAFG00000002546) TATDN2 (ENSLAFG00000028812) GHRL (ENSLAFG00000014068) SEC13 (ENSLAFG00000014598) ATP2B2 (ENSLAFG00000014604) SLC6A11 (ENSLAFG00000016494) SLC6A1 (ENSLAFG00000022374) HRH1 (ENSLAFG00000017128) #11 ATG7 (ENSLAFG00000017130) #12 VGLL4 (ENSLAFG00000017133) #13 TAMM41 (ENSLAFG00000011239) #14 TIMP4 (ENSLAFG00000004660) #17 SYN2 (ENSLAFG00000004657) #18 PPARG (ENSLAFG00000030870) #19 TSEN2 (ENSLAFG00000009300) #20 MKRN2 (ENSLAFG00000011601) #22 RAF1 (ENSLAFG00000011608) #23 TMEM40 (ENSLAFG00000010230) #24 CAND2 (ENSLAFG00000017706) #25 ENSLAFG00000032737 ##26 EFCAB12 (ENSLAFG00000010605) #27 MBD4 (ENSLAFG00000010609) #28 IFT122 (ENSLAFG00000010612) #29 RHO (ENSLAFG00000001359) #30 PLXND1 (ENSLAFG00000003012) #31 TMCC1 (ENSLAFG00000013730) #33 TRH (ENSLAFG00000015165) #35 RBSN (ENSLAFG00000004227) #36 MRPS25 (ENSLAFG00000022178) #37 NR2C2 (ENSLAFG00000010224) FGD5 (ENSLAFG00000010491) Xenarthra ANCESTRAL SPECIES 662 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017740.a.b #25 Sloth MODERN SPECIES 7323 MKRN2 (ENSCHOG00000005438) #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 1334 SYN2 (ENSDNOG00000012852) #18 TIMP4 (ENSDNOG00000012868) #17 PPARG (ENSDNOG00000018641) #19 TSEN2 (ENSDNOG00000038504) #20 MKRN2OS (ENSDNOG00000042709) #21 ENSDNOG00000017476 #22 RAF1 (ENSDNOG00000009252) #23 CAND2 (ENSDNOG00000040049) #25 Armadillo MODERN SPECIES 3990 ENSDNOG00000046250 ENSDNOG00000038909 ENSDNOG00000017670 ENSDNOG00000037191 ENSDNOG00000041414 ENSDNOG00000041622 ENSDNOG00000036350 ENSDNOG00000040494 #22 Marsupialia ANCESTRAL SPECIES 14 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00940000154650.d.g.b.a.a.a.b ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973 #26 ENSGT00390000014874 #27 ENSGT00530000063687.a.a #28 ENSGT00530000063687.a.b #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 Opossum MODERN SPECIES 5 ENSMODG00000039480 SEC13 (ENSMODG00000005505) ATP2B2 (ENSMODG00000005537) SLC6A11 (ENSMODG00000005602) SLC6A1 (ENSMODG00000005984) HRH1 (ENSMODG00000006000) #11 ENSMODG00000006043 ATG7 (ENSMODG00000006136) #12 VGLL4 (ENSMODG00000006145) #13 ENSMODG00000006153 #14 SYN2 (ENSMODG00000006159) #18 TIMP4 (ENSMODG00000006199) #17 PPARG (ENSMODG00000006233) #19 TSEN2 (ENSMODG00000006249) #20 MKRN2OS (ENSMODG00000006265) #21 MKRN2 (ENSMODG00000006280) #22 RAF1 (ENSMODG00000006307) #23 ENSMODG00000025518 #24 CAND2 (ENSMODG00000006377) #25 RPL32 (ENSMODG00000037211) #26 ENSMODG00000006335 #27 ENSMODG00000006399 #28 ENSMODG00000042737 #28 IFT122 (ENSMODG00000006462) #29 RHO (ENSMODG00000006488) #30 ENSMODG00000028422 PLXND1 (ENSMODG00000006963) #31 TMCC1 (ENSMODG00000006987) #33 ENSMODG00000044035 ENSMODG00000042057 ENSMODG00000028708 #35 Marsupialia_b ANCESTRAL SPECIES 14 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00940000154650.d.g.b.a.a.a.b ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973 #26 ENSGT00390000014874 #27 ENSGT00530000063687.a.a #28 ENSGT00530000063687.a.b #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT00940000160900 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 Diprotodontia ANCESTRAL SPECIES 12 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00940000154650.d.g.b.a.a.a.b ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973 #26 ENSGT00390000014874 #27 ENSGT00530000063687.a.a #28 ENSGT00530000063687.a.b #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 Wallaby MODERN SPECIES 9824 MKRN2 (ENSMEUG00000004347) #22 RAF1 (ENSMEUG00000004360) #23 Diprotodontia_a ANCESTRAL SPECIES 10 ENSGT00390000004064 ENSGT00940000153393.B ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00940000154650.d.g.b.a.a.a.b ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000017530 #24 ENSGT00390000017740.a.b #25 ENSGT00940000153973 #26 ENSGT00390000014874 #27 ENSGT00530000063687.a.a #28 ENSGT00530000063687.a.b #28 ENSGT00390000001016.b #29 ENSGT01030000234549.a.a.a.a.a.b.b #30 ENSGT01020000230394.e.b.a #31 ENSGT00940000155189 #33 ENSGT00390000016951 #35 ENSGT00390000007159 #36 ENSGT00640000091558 #37 ENSGT00940000158393 koala MODERN SPECIES 10 GHRL (ENSPCIG00000021917) ENSPCIG00000021918 ATP2B2 (ENSPCIG00000024350) SLC6A11 (ENSPCIG00000011028) SLC6A1 (ENSPCIG00000011049) HRH1 (ENSPCIG00000011053) #11 ENSPCIG00000011056 ATG7 (ENSPCIG00000011062) #12 VGLL4 (ENSPCIG00000011097) #13 TAMM41 (ENSPCIG00000036857) #14 SYN2 (ENSPCIG00000002007) #18 TIMP4 (ENSPCIG00000002040) #17 PPARG (ENSPCIG00000002060) #19 TSEN2 (ENSPCIG00000002191) #20 MKRN2OS (ENSPCIG00000002201) #21 MKRN2 (ENSPCIG00000031653) #22 RAF1 (ENSPCIG00000009694) #23 TMEM40 (ENSPCIG00000002215) #24 CAND2 (ENSPCIG00000002229) #25 RPL32 (ENSPCIG00000036095) #26 ENSPCIG00000002263 #27 ENSPCIG00000002276 #28 ENSPCIG00000035263 #28 IFT122 (ENSPCIG00000002304) #29 RHO (ENSPCIG00000002359) #30 PLXND1 (ENSPCIG00000002459) #31 TMCC1 (ENSPCIG00000002496) #33 ENSPCIG00000023527 #35 RBSN (ENSPCIG00000023528) #36 ENSPCIG00000023530 #37 NR2C2 (ENSPCIG00000023531) Common wonbat MODERN SPECIES 1012 GHRL (ENSVURG00010011569) ENSVURG00010011601 SLC6A11 (ENSVURG00010011698) ENSVURG00010011722 SLC6A1 (ENSVURG00010011767) HRH1 (ENSVURG00010012968) #11 ATG7 (ENSVURG00010012989) #12 VGLL4 (ENSVURG00010013026) #13 TAMM41 (ENSVURG00010013046) #14 ENSVURG00010013071 #18 TIMP4 (ENSVURG00010013076) #17 ENSVURG00010013080 #18 PPARG (ENSVURG00010013093) #19 TSEN2 (ENSVURG00010013138) #20 MKRN2OS (ENSVURG00010013158) #21 MKRN2 (ENSVURG00010013169) #22 RAF1 (ENSVURG00010013196) #23 TMEM40 (ENSVURG00010013215) #24 CAND2 (ENSVURG00010013279) #25 ENSVURG00010014192 #26 ENSVURG00010014212 #27 ENSVURG00010014225 #28 IFT122 (ENSVURG00010014263) #29 RHO (ENSVURG00010014434) #30 PLXND1 (ENSVURG00010014456) #31 TMCC1 (ENSVURG00010014518) #33 RBSN (ENSVURG00010014533) #36 MRPS25 (ENSVURG00010014548) #37 NR2C2 (ENSVURG00010014575) ENSVURG00010014858 FGD5 (ENSVURG00010014863) Tasmanian devil DUPLICATION Tasmanian devil MODERN SPECIES SEC13 (ENSSHAG00000016558) ENSSHAG00000017272 SLC6A11 (ENSSHAG00000026964) ENSSHAG00000018140 HRH1 (ENSSHAG00000028397) #11 ATG7 (ENSSHAG00000022602) #12 ENSSHAG00000031478 ENSSHAG00000027506 ENSSHAG00000018702 #13 TAMM41 (ENSSHAG00000018802) #14 SYN2 (ENSSHAG00000006422) #18 TIMP4 (ENSSHAG00000006738) #17 PPARG (ENSSHAG00000008610) #19 TSEN2 (ENSSHAG00000010530) #20 MKRN2OS (ENSSHAG00000010787) #21 ENSSHAG00000011021 #22 RAF1 (ENSSHAG00000011099) #23 TMEM40 (ENSSHAG00000012194) #24 CAND2 (ENSSHAG00000012567) #25 ENSSHAG00000012782 #26 ENSSHAG00000012822 #27 MBD4 (ENSSHAG00000012953) #28 IFT122 (ENSSHAG00000013078) #29 RHO (ENSSHAG00000013534) #30 ENSSHAG00000029482 PLXND1 (ENSSHAG00000013651) #31 TMCC1 (ENSSHAG00000014733) #33 ENSSHAG00000026312 #35 ENSSHAG00000015988 #36 NR2C2 (ENSSHAG00000016078) ENSSHAG00000024996 Tasmanian devil MODERN SPECIES 5 ENSSHAG00000018284 ENSSHAG00000018331 E2F8 (ENSSHAG00000018372) ENSSHAG00000028087 ENSSHAG00000008439 DBX1 (ENSSHAG00000011774) HTATIP2 (ENSSHAG00000028422) PRMT3 (ENSSHAG00000012761) SLC6A5 (ENSSHAG00000013820) NELL1 (ENSSHAG00000030702) ENSSHAG00000008387 ANO5 (ENSSHAG00000012452) SLC17A6 (ENSSHAG00000031119) ENSSHAG00000023873 GAS2 (ENSSHAG00000014709) ENSSHAG00000015939 #22 LUZP2 (ENSSHAG00000023207) ENSSHAG00000029103 ANO3 (ENSSHAG00000007618) SLC5A12 (ENSSHAG00000009558) FIBIN (ENSSHAG00000023983) BBOX1 (ENSSHAG00000011451) ENSSHAG00000012905 LGR4 (ENSSHAG00000013104) LIN7C (ENSSHAG00000013710) BDNF (ENSSHAG00000014528) KIF18A (ENSSHAG00000015625) ENSSHAG00000015956 KCNA4 (ENSSHAG00000031255) FSHB (ENSSHAG00000009491) ARL14EP (ENSSHAG00000025815) Platypus MODERN SPECIES 83 NAE1 (ENSOANG00000001061) ENSOANG00000030932 ENSOANG00000032301 ENSOANG00000030783 ENSOANG00000029079 ENSOANG00000031931 CA7 (ENSOANG00000012209) PDP2 (ENSOANG00000015274) ENSOANG00000042386 RRAD (ENSOANG00000013935) CIAO2B (ENSOANG00000045690) ENSOANG00000011648 #20 MKRN2OS (ENSOANG00000039177) #21 MKRN2 (ENSOANG00000038817) #22 RAF1 (ENSOANG00000005684) #23 ENSOANG00000045625 ISY1 (ENSOANG00000013141) PPARG (ENSOANG00000046286) #19 SYN2 (ENSOANG00000020050) #18 SEMA3G (ENSOANG00000013236) LINGO3 (ENSOANG00000003705) ENSOANG00000030064 OAZ1 (ENSOANG00000000654) ENSOANG00000036300 DOT1L (ENSOANG00000010015) ENSOANG00000050388 MOB3A (ENSOANG00000040976) MKNK2 (ENSOANG00000048798) ENSOANG00000036327 Sauria ANCESTRAL SPECIES 13 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 Archelosauria ANCESTRAL SPECIES 17 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 Cryptodira ANCESTRAL SPECIES 41 ENSGT00390000011897 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569.b ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00390000011897 ENSGT00390000004860.nb ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569.b ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 Emydidae ANCESTRAL SPECIES 9 ENSGT00390000011897 ENSGT00390000004860.nb ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569.b ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 painted turtle MODERN SPECIES 14 CENPP (ENSCPBG00000006781) NOL8 (ENSCPBG00000006773) IARS1 (ENSCPBG00000001174) ENSCPBG00000000579 SLC6A11 (ENSCPBG00000000487) ENSCPBG00000000450 SLC6A1 (ENSCPBG00000000431) HRH1 (ENSCPBG00000000415) #11 ATG7 (ENSCPBG00000000334) #12 TAMM41 (ENSCPBG00000000254) #14 TIMP4 (ENSCPBG00000026368) #17 SYN2 (ENSCPBG00000026365) #18 PPARG (ENSCPBG00000026361) #19 TSEN2 (ENSCPBG00000026359) #20 MKRN2OS (ENSCPBG00000026357) #21 MKRN2 (ENSCPBG00000026356) #22 RAF1 (ENSCPBG00000026352) #23 ENSCPBG00000026349 ENSCPBG00000026348 ISY1 (ENSCPBG00000026346) ENSCPBG00000026344 RAB43 (ENSCPBG00000026343) ENSCPBG00000026342 Three-toed box turtle MODERN SPECIES 107 ENSTMTG00000016992 ENSTMTG00000016954 IARS1 (ENSTMTG00000016725) ENSTMTG00000016217 SLC6A11 (ENSTMTG00000016054) SLC6A1 (ENSTMTG00000015874) HRH1 (ENSTMTG00000015850) #11 ATG7 (ENSTMTG00000015759) #12 VGLL4 (ENSTMTG00000015729) #13 TAMM41 (ENSTMTG00000015707) #14 TIMP4 (ENSTMTG00000015688) #17 SYN2 (ENSTMTG00000015621) #18 PPARG (ENSTMTG00000015596) #19 TSEN2 (ENSTMTG00000015573) #20 ENSTMTG00000015561 MKRN2 (ENSTMTG00000015544) #22 RAF1 (ENSTMTG00000015520) #23 ENSTMTG00000015505 ISY1 (ENSTMTG00000015483) ENSTMTG00000015448 RAB43 (ENSTMTG00000015431) GP9 (ENSTMTG00000010971) EFCC1 (ENSTMTG00000010945) CFAP92 (ENSTMTG00000010898) ACAD9 (ENSTMTG00000010840) IQSEC1 (ENSTMTG00000010796) Testudinidae ANCESTRAL SPECIES 5 ENSGT00390000011897 ENSGT00390000004860.nb.c ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569.b ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.c.b ENSGT00940000167251 ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 Goode s thornscrub tortoise MODERN SPECIES 21 ENSGEVG00005015160 ENSGEVG00005015198 IARS1 (ENSGEVG00005015240) ATP2B2 (ENSGEVG00005015471) SLC6A11 (ENSGEVG00005017116) SLC6A1 (ENSGEVG00005017316) HRH1 (ENSGEVG00005017663) #11 ATG7 (ENSGEVG00005017701) #12 VGLL4 (ENSGEVG00005017769) #13 TAMM41 (ENSGEVG00005017797) #14 SYN2 (ENSGEVG00005017832) #18 TIMP4 (ENSGEVG00005017900) #17 PPARG (ENSGEVG00005017941) #19 TSEN2 (ENSGEVG00005017977) #20 MKRN2OS (ENSGEVG00005017994) #21 MKRN2 (ENSGEVG00005018003) #22 RAF1 (ENSGEVG00005018027) #23 ENSGEVG00005018078 ENSGEVG00005005307 ENSGEVG00005005367 ENSGEVG00005005430 RAB43 (ENSGEVG00005005485) GP9 (ENSGEVG00005005510) ENSGEVG00005005535 ENSGEVG00005005602 ACAD9 (ENSGEVG00005005630) IQSEC1 (ENSGEVG00005005708) NUP210 (ENSGEVG00005005766) HDAC11 (ENSGEVG00005005930) ENSGEVG00005005963 FBLN2 (ENSGEVG00005005981) Abingdon island giant tortoise MODERN SPECIES 252 TIMP4 (ENSCABG00000022127) #17 SYN2 (ENSCABG00000022126) #18 PPARG (ENSCABG00000022125) #19 ENSCABG00000022124 TSEN2 (ENSCABG00000022123) #20 ENSCABG00000022122 MKRN2 (ENSCABG00000022121) #22 RAF1 (ENSCABG00000022083) #23 Chinese turtle MODERN SPECIES 660 ENSPSIG00000015446 ENSPSIG00000015328 ENSPSIG00000015319 USP4 (ENSPSIG00000014081) HRH1 (ENSPSIG00000000512) #11 ATG7 (ENSPSIG00000012300) #12 VGLL4 (ENSPSIG00000012119) #13 TAMM41 (ENSPSIG00000012037) #14 TIMP4 (ENSPSIG00000011745) #17 SYN2 (ENSPSIG00000011238) #18 PPARG (ENSPSIG00000011100) #19 ENSPSIG00000010669 #20 MKRN2OS (ENSPSIG00000010665) #21 MKRN2 (ENSPSIG00000010483) #22 RAF1 (ENSPSIG00000009677) #23 ENSPSIG00000009556 ISY1 (ENSPSIG00000009384) Archosauria ANCESTRAL SPECIES 24 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 Australian saltwater crocodile MODERN SPECIES 37 OMD (ENSCPRG00005019193) OGN (ENSCPRG00005019192) IARS1 (ENSCPRG00005019188) ENSCPRG00005019186 SLC6A11 (ENSCPRG00005019185) SLC6A1 (ENSCPRG00005019184) HRH1 (ENSCPRG00005019183) #11 ATG7 (ENSCPRG00005019181) #12 VGLL4 (ENSCPRG00005019180) #13 TAMM41 (ENSCPRG00005019178) #14 TIMP4 (ENSCPRG00005019177) #17 SYN2 (ENSCPRG00005019176) #18 PPARG (ENSCPRG00005019174) #19 TSEN2 (ENSCPRG00005019173) #20 MKRN2OS (ENSCPRG00005019172) #21 MKRN2 (ENSCPRG00005019171) #22 RAF1 (ENSCPRG00005019170) #23 ENSCPRG00005019169 ISY1 (ENSCPRG00005019167) ENSCPRG00005019166 RAB43 (ENSCPRG00005019165) ENSCPRG00005019163 GP9 (ENSCPRG00005019162) ENSCPRG00005019161 CFAP92 (ENSCPRG00005019160) ACAD9 (ENSCPRG00005019159) IQSEC1 (ENSCPRG00005019158) NUP210 (ENSCPRG00005019156) HDAC11 (ENSCPRG00005019154) FBLN2 (ENSCPRG00005019153) WNT7A (ENSCPRG00005019151) Aves ANCESTRAL SPECIES 29 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00960000189495 African ostrich MODERN SPECIES 1066 OGN (ENSSCUG00000014870) NOL8 (ENSSCUG00000014881) IARS1 (ENSSCUG00000014894) ATP2B2 (ENSSCUG00000014930) SLC6A11 (ENSSCUG00000014961) SLC6A1 (ENSSCUG00000014975) HRH1 (ENSSCUG00000014994) #11 ATG7 (ENSSCUG00000015003) #12 VGLL4 (ENSSCUG00000015010) #13 TAMM41 (ENSSCUG00000015017) #14 TIMP4 (ENSSCUG00000015038) #17 SYN2 (ENSSCUG00000015041) #18 PPARG (ENSSCUG00000015050) #19 TSEN2 (ENSSCUG00000015062) #20 MKRN2OS (ENSSCUG00000015069) #21 MKRN2 (ENSSCUG00000015071) #22 RAF1 (ENSSCUG00000015081) #23 ENSSCUG00000015086 ISY1 (ENSSCUG00000015087) ENSSCUG00000015094 RAB43 (ENSSCUG00000015101) GP9 (ENSSCUG00000015105) CFAP92 (ENSSCUG00000015116) ACAD9 (ENSSCUG00000015133) NUP210 (ENSSCUG00000015147) HDAC11 (ENSSCUG00000015163) FBLN2 (ENSSCUG00000015170) WNT7A (ENSSCUG00000015175) ENSSCUG00000015181 PTPDC1 (ENSSCUG00000015185) PHF2 (ENSSCUG00000015198) Neognathae ANCESTRAL SPECIES 27 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00960000189495 Galloanserae ANCESTRAL SPECIES 26 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00960000189495 Anatidae ANCESTRAL SPECIES 54 ENSGT00390000011897 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT01030000235208 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 Pink-footed goose MODERN SPECIES 110 HRH1 (ENSABRG00000009830) #11 ATG7 (ENSABRG00000009797) #12 VGLL4 (ENSABRG00000009786) #13 TAMM41 (ENSABRG00000009773) #14 TIMP4 (ENSABRG00000009748) #17 SYN2 (ENSABRG00000009741) #18 PPARG (ENSABRG00000009733) #19 TSEN2 (ENSABRG00000009724) #20 ENSABRG00000009722 MKRN2 (ENSABRG00000009708) #22 RAF1 (ENSABRG00000009695) #23 ENSABRG00000009679 ISY1 (ENSABRG00000009673) ENSABRG00000009510 RAB43 (ENSABRG00000009489) GP9 (ENSABRG00000009470) EFCC1 (ENSABRG00000009460) CFAP92 (ENSABRG00000009441) ACAD9 (ENSABRG00000008890) IQSEC1 (ENSABRG00000008262) NUP210 (ENSABRG00000007910) HDAC11 (ENSABRG00000007799) FBLN2 (ENSABRG00000007418) WNT7A (ENSABRG00000007393) ENSABRG00000007383 Duck MODERN SPECIES 4 ENSAPLG00000030112 ATP2B2 (ENSAPLG00000006083) SLC6A11 (ENSAPLG00000006803) SLC6A1 (ENSAPLG00000010815) ENSAPLG00000024336 HRH1 (ENSAPLG00000011710) #11 ATG7 (ENSAPLG00000010216) #12 VGLL4 (ENSAPLG00000010053) #13 TAMM41 (ENSAPLG00000009828) #14 ENSAPLG00000028592 TIMP4 (ENSAPLG00000027938) #17 SYN2 (ENSAPLG00000009144) #18 PPARG (ENSAPLG00000009031) #19 ENSAPLG00000014992 #20 ENSAPLG00000017751 MKRN2 (ENSAPLG00000014833) #22 RAF1 (ENSAPLG00000014376) #23 ENSAPLG00000014227 ISY1 (ENSAPLG00000014136) RAB43 (ENSAPLG00000026304) GP9 (ENSAPLG00000001853) ENSAPLG00000013971 ENSAPLG00000013916 ACAD9 (ENSAPLG00000013493) IQSEC1 (ENSAPLG00000013323) NUP210 (ENSAPLG00000012355) HDAC11 (ENSAPLG00000012032) FBLN2 (ENSAPLG00000014027) WNT7A (ENSAPLG00000013876) ENSAPLG00000026214 PTPDC1 (ENSAPLG00000013824) Phasianidae ANCESTRAL SPECIES 16 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000004113 Phasianidae_b ANCESTRAL SPECIES 16 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000004113 Chicken MODERN SPECIES 3 NOL8 (ENSGALG00010027207) ENSGALG00010028201 IARS1 (ENSGALG00010027218) ATP2B2 (ENSGALG00010027231) SLC6A11 (ENSGALG00010027234) SLC6A1 (ENSGALG00010027240) HRH1 (ENSGALG00010027243) #11 ATG7 (ENSGALG00010027247) #12 VGLL4 (ENSGALG00010027253) #13 TAMM41 (ENSGALG00010027263) #14 SYN2 (ENSGALG00010027905) #18 TIMP4 (ENSGALG00010027909) #17 PPARG (ENSGALG00010027917) #19 TSEN2 (ENSGALG00010027919) #20 MKRN2OS (ENSGALG00010027921) #21 MKRN2 (ENSGALG00010027925) #22 RAF1 (ENSGALG00010027930) #23 CNBP (ENSGALG00010027934) ISY1 (ENSGALG00010027935) ENSGALG00010027938 RAB43 (ENSGALG00010027943) GP9 (ENSGALG00010027947) ENSGALG00010027958 CFAP92 (ENSGALG00010027954) ACAD9 (ENSGALG00010027965) IQSEC1 (ENSGALG00010027975) NUP210 (ENSGALG00010027980) HDAC11 (ENSGALG00010027988) FBLN2 (ENSGALG00010027649) WNT7A (ENSGALG00010027653) PTPDC1 (ENSGALG00010027667) Turkey MODERN SPECIES 5 NOL8 (ENSMGAG00000004495) IARS1 (ENSMGAG00000004555) ENSMGAG00000004661 SLC6A11 (ENSMGAG00000004717) SLC6A1 (ENSMGAG00000004819) HRH1 (ENSMGAG00000004868) #11 ATG7 (ENSMGAG00000004873) #12 ENSMGAG00000019207 VGLL4 (ENSMGAG00000004921) #13 TAMM41 (ENSMGAG00000004937) #14 ENSMGAG00000021149 SYN2 (ENSMGAG00000004944) #18 TIMP4 (ENSMGAG00000004964) #17 PPARG (ENSMGAG00000004981) #19 TSEN2 (ENSMGAG00000005015) #20 MKRN2 (ENSMGAG00000005057) #22 RAF1 (ENSMGAG00000005082) #23 ENSMGAG00000005152 ISY1 (ENSMGAG00000005181) ENSMGAG00000005131 ENSMGAG00000005141 GP9 (ENSMGAG00000015506) ENSMGAG00000005211 ACAD9 (ENSMGAG00000005216) IQSEC1 (ENSMGAG00000005294) NUP210 (ENSMGAG00000005324) HDAC11 (ENSMGAG00000005351) FBLN2 (ENSMGAG00000005381) WNT7A (ENSMGAG00000005423) PTPDC1 (ENSMGAG00000005445) PHF2 (ENSMGAG00000005454) Japanese quail MODERN SPECIES 3 OMD (ENSCJPG00005012246) OGN (ENSCJPG00005012247) ENSCJPG00005012248 IARS1 (ENSCJPG00005012250) ENSCJPG00005012303 SLC6A11 (ENSCJPG00005012307) SLC6A1 (ENSCJPG00005012319) HRH1 (ENSCJPG00005012860) #11 ATG7 (ENSCJPG00005012861) #12 VGLL4 (ENSCJPG00005012862) #13 TAMM41 (ENSCJPG00005012865) #14 SYN2 (ENSCJPG00005012866) #18 TIMP4 (ENSCJPG00005012867) #17 PPARG (ENSCJPG00005012868) #19 TSEN2 (ENSCJPG00005012869) #20 MKRN2 (ENSCJPG00005012870) #22 MKRN2OS (ENSCJPG00005012871) #21 RAF1 (ENSCJPG00005012872) #23 ENSCJPG00005012873 ISY1 (ENSCJPG00005012874) ENSCJPG00005012875 RAB43 (ENSCJPG00005012876) GP9 (ENSCJPG00005012877) ENSCJPG00005012878 ENSCJPG00005012879 ACAD9 (ENSCJPG00005012880) IQSEC1 (ENSCJPG00005012881) NUP210 (ENSCJPG00005012882) HDAC11 (ENSCJPG00005012883) FBLN2 (ENSCJPG00005012884) WNT7A (ENSCJPG00005012887) Neognathae_b ANCESTRAL SPECIES 18 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000004113 Passeriformes ANCESTRAL SPECIES 16 ENSGT00390000004860 ENSGT00950000182865.b.b.b.c.a ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000004113 ENSGT00940000160218 Great tit DUPLICATION Great tit MODERN SPECIES 4 ADAMTS2 (ENSPMJG00000008215) RUFY1 (ENSPMJG00000008200) ENSPMJG00000008198 ENSPMJG00000008197 ENSPMJG00000008196 CANX (ENSPMJG00000008194) MAML1 (ENSPMJG00000008193) ENSPMJG00000008192 MGAT4B (ENSPMJG00000008191) SQSTM1 (ENSPMJG00000008190) ENSPMJG00000008189 TBC1D9B (ENSPMJG00000008188) RNF130 (ENSPMJG00000008163) FLT4 (ENSPMJG00000008144) ENSPMJG00000008142 ENSPMJG00000008140 #22 HMGXB3 (ENSPMJG00000008137) CSF1R (ENSPMJG00000008134) PDGFRB (ENSPMJG00000008128) ENSPMJG00000008125 SLC6A7 (ENSPMJG00000008124) ENSPMJG00000008123 ARSI (ENSPMJG00000008122) ENSPMJG00000008121 CD74 (ENSPMJG00000008120) RPS14 (ENSPMJG00000008117) NDST1 (ENSPMJG00000008113) SYNPO (ENSPMJG00000008111) MYOZ3 (ENSPMJG00000008108) RBM22 (ENSPMJG00000008107) DCTN4 (ENSPMJG00000008104) Great tit MODERN SPECIES 3 PTPDC1 (ENSPMJG00000004327) IARS1 (ENSPMJG00000004334) ATP2B2 (ENSPMJG00000004350) SLC6A11 (ENSPMJG00000004374) SLC6A1 (ENSPMJG00000004995) HRH1 (ENSPMJG00000005006) #11 ATG7 (ENSPMJG00000005007) #12 VGLL4 (ENSPMJG00000005038) #13 TAMM41 (ENSPMJG00000005039) #14 ENSPMJG00000005042 #18 TIMP4 (ENSPMJG00000005043) #17 ENSPMJG00000005053 #18 PPARG (ENSPMJG00000005054) #19 TSEN2 (ENSPMJG00000005055) #20 MKRN2OS (ENSPMJG00000005056) #21 ENSPMJG00000005058 #22 RAF1 (ENSPMJG00000005061) #23 ENSPMJG00000005065 ENSPMJG00000005069 ISY1 (ENSPMJG00000005074) ENSPMJG00000005079 RAB43 (ENSPMJG00000005081) GP9 (ENSPMJG00000005082) ENSPMJG00000005084 ENSPMJG00000005086 ENSPMJG00000005087 CENPP (ENSPMJG00000005088) OGN (ENSPMJG00000005089) OMD (ENSPMJG00000005090) ASPN (ENSPMJG00000005091) ECM2 (ENSPMJG00000005093) Passeriformes_d ANCESTRAL SPECIES 16 ENSGT00390000004860 ENSGT00950000182865.b.b.b.c.a ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000014300.p ENSGT00950000183041.A ENSGT00390000014109.d.b.a ENSGT00940000164112.a ENSGT00940000161980.f ENSGT00530000064244.a ENSGT00940000163561 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000004113 Flycatcher MODERN SPECIES 3 ENSFALG00000009075 ENSFALG00000023030 IARS1 (ENSFALG00000010261) ENSFALG00000000003 ENSFALG00000028800 SLC6A11 (ENSFALG00000000004) SLC6A1 (ENSFALG00000000005) HRH1 (ENSFALG00000014152) #11 ATG7 (ENSFALG00000000006) #12 VGLL4 (ENSFALG00000000007) #13 TAMM41 (ENSFALG00000000008) #14 TIMP4 (ENSFALG00000023921) #17 SYN2 (ENSFALG00000000009) #18 PPARG (ENSFALG00000028484) #19 TSEN2 (ENSFALG00000000012) #20 MKRN2 (ENSFALG00000000015) #22 RAF1 (ENSFALG00000000018) #23 ENSFALG00000014288 ENSFALG00000025948 ENSFALG00000000023 ENSFALG00000000024 ENSFALG00000028736 ENSFALG00000000026 ENSFALG00000000031 IQSEC1 (ENSFALG00000000034) NUP210 (ENSFALG00000000036) HDAC11 (ENSFALG00000023220) ENSFALG00000026076 FBLN2 (ENSFALG00000009172) ENSFALG00000026079 WNT7A (ENSFALG00000024842) Passeriformes_g ANCESTRAL SPECIES 16 ENSGT00390000004860 ENSGT00950000182865.b.b.b.c.a ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000014300.p ENSGT00950000183041.A ENSGT00390000014109.d.b.a ENSGT00940000164112.a ENSGT00940000161980.f ENSGT00530000064244.a ENSGT00940000163561 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000004113 Passeroidea ANCESTRAL SPECIES 16 ENSGT00390000004860 ENSGT00950000182865.b.b.b.c.a ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00390000014300.p ENSGT00950000183041.A ENSGT00390000014109.d.b.a ENSGT00940000164112.a ENSGT00940000161980.f ENSGT00530000064244.a ENSGT00940000163561 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000004113 Zebra finch MODERN SPECIES 3 IARS1 (ENSTGUG00000004410) ATP2B2 (ENSTGUG00000004296) SLC6A11 (ENSTGUG00000004225) SLC6A1 (ENSTGUG00000004182) HRH1 (ENSTGUG00000004180) #11 ATG7 (ENSTGUG00000004145) #12 VGLL4 (ENSTGUG00000004136) #13 TAMM41 (ENSTGUG00000004121) #14 SYN2 (ENSTGUG00000004093) #18 ENSTGUG00000025121 TIMP4 (ENSTGUG00000019602) #17 PPARG (ENSTGUG00000004069) #19 ENSTGUG00000025620 TSEN2 (ENSTGUG00000004044) #20 MKRN2OS (ENSTGUG00000028016) #21 MKRN2 (ENSTGUG00000004017) #22 RAF1 (ENSTGUG00000004006) #23 ENSTGUG00000004001 ENSTGUG00000003998 ENSTGUG00000003984 RAB43 (ENSTGUG00000021700) GP9 (ENSTGUG00000003978) ENSTGUG00000023307 ACAD9 (ENSTGUG00000003909) IQSEC1 (ENSTGUG00000003876) ENSTGUG00000003823 ENSTGUG00000003803 FBLN2 (ENSTGUG00000003758) ENSTGUG00000022371 WNT7A (ENSTGUG00000003752) PTPDC1 (ENSTGUG00000003741) Common canary MODERN SPECIES 15 CENPP (ENSSCAG00000012700) ENSSCAG00000012697 IARS1 (ENSSCAG00000012686) ATP2B2 (ENSSCAG00000012674) SLC6A11 (ENSSCAG00000012356) SLC6A1 (ENSSCAG00000011359) HRH1 (ENSSCAG00000011131) #11 ATG7 (ENSSCAG00000011122) #12 VGLL4 (ENSSCAG00000011116) #13 TAMM41 (ENSSCAG00000011113) #14 TIMP4 (ENSSCAG00000011112) #17 SYN2 (ENSSCAG00000011108) #18 PPARG (ENSSCAG00000011103) #19 TSEN2 (ENSSCAG00000011099) #20 MKRN2OS (ENSSCAG00000011095) #21 MKRN2 (ENSSCAG00000011091) #22 RAF1 (ENSSCAG00000011068) #23 ENSSCAG00000011058 ENSSCAG00000011053 ISY1 (ENSSCAG00000011046) ENSSCAG00000010990 RAB43 (ENSSCAG00000010955) GP9 (ENSSCAG00000010953) ENSSCAG00000010950 ENSSCAG00000010945 ENSSCAG00000010943 ACAD9 (ENSSCAG00000010788) IQSEC1 (ENSSCAG00000010741) NUP210 (ENSSCAG00000010702) HDAC11 (ENSSCAG00000010687) FBLN2 (ENSSCAG00000010640) Medium ground finch MODERN SPECIES 321 SYN2 (ENSGFOG00000010635) #18 PPARG (ENSGFOG00000010112) #19 TSEN2 (ENSGFOG00000009700) #20 MKRN2 (ENSGFOG00000010465) #22 RAF1 (ENSGFOG00000010417) #23 ENSGFOG00000010404 ENSGFOG00000010397 ENSGFOG00000010387 ENSGFOG00000010368 RAB43 (ENSGFOG00000010361) GP9 (ENSGFOG00000010358) Neognathae_c ANCESTRAL SPECIES 21 ENSGT00390000004860 ENSGT00620000089227 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156308 ENSGT00940000156047 ENSGT00940000158523 ENSGT00390000004113 Golden eagle MODERN SPECIES 12 ENSACCG00020010204 ENSACCG00020010173 IARS1 (ENSACCG00020010143) ATP2B2 (ENSACCG00020010108) SLC6A11 (ENSACCG00020010066) SLC6A1 (ENSACCG00020010053) HRH1 (ENSACCG00020010042) #11 ATG7 (ENSACCG00020010015) #12 VGLL4 (ENSACCG00020009982) #13 TAMM41 (ENSACCG00020009963) #14 TIMP4 (ENSACCG00020009945) #17 SYN2 (ENSACCG00020009920) #18 PPARG (ENSACCG00020009885) #19 TSEN2 (ENSACCG00020009874) #20 MKRN2OS (ENSACCG00020009863) #21 MKRN2 (ENSACCG00020009843) #22 RAF1 (ENSACCG00020009762) #23 ENSACCG00020009718 ISY1 (ENSACCG00020009699) ENSACCG00020009638 RAB43 (ENSACCG00020009539) GP9 (ENSACCG00020009526) ENSACCG00020009517 CFAP92 (ENSACCG00020009502) ACAD9 (ENSACCG00020009474) IQSEC1 (ENSACCG00020009446) NUP210 (ENSACCG00020009416) HDAC11 (ENSACCG00020009388) FBLN2 (ENSACCG00020009352) WNT7A (ENSACCG00020011302) PTPDC1 (ENSACCG00020011283) Kakapo MODERN SPECIES 3 ENSSHBG00005010656 ENSSHBG00005010633 IARS1 (ENSSHBG00005009904) ATP2B2 (ENSSHBG00005009663) SLC6A11 (ENSSHBG00005009639) SLC6A1 (ENSSHBG00005009619) HRH1 (ENSSHBG00005009603) #11 ATG7 (ENSSHBG00005008229) #12 VGLL4 (ENSSHBG00005008062) #13 TAMM41 (ENSSHBG00005008045) #14 TIMP4 (ENSSHBG00005008034) #17 SYN2 (ENSSHBG00005008017) #18 PPARG (ENSSHBG00005008004) #19 TSEN2 (ENSSHBG00005007982) #20 MKRN2OS (ENSSHBG00005007967) #21 MKRN2 (ENSSHBG00005007960) #22 RAF1 (ENSSHBG00005007932) #23 ENSSHBG00005007914 ISY1 (ENSSHBG00005007896) ENSSHBG00005007853 RAB43 (ENSSHBG00005007820) GP9 (ENSSHBG00005007812) ENSSHBG00005007802 CFAP92 (ENSSHBG00005007781) ACAD9 (ENSSHBG00005007759) IQSEC1 (ENSSHBG00005007655) NUP210 (ENSSHBG00005007487) HDAC11 (ENSSHBG00005007414) ENSSHBG00005007405 FBLN2 (ENSSHBG00005007366) WNT7A (ENSSHBG00005007337) Lepidosauria ANCESTRAL SPECIES 14 ENSGT00980000199506 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 ENSGT00960000189495 tuatara MODERN SPECIES 1318 TAMM41 (ENSSPUG00000018148) #14 TIMP4 (ENSSPUG00000018140) #17 SYN2 (ENSSPUG00000018134) #18 PPARG (ENSSPUG00000018117) #19 TSEN2 (ENSSPUG00000018099) #20 MKRN2OS (ENSSPUG00000018090) #21 MKRN2 (ENSSPUG00000018086) #22 RAF1 (ENSSPUG00000018074) #23 ENSSPUG00000018059 ISY1 (ENSSPUG00000018050) ENSSPUG00000017987 RAB43 (ENSSPUG00000017960) PREX1 (ENSSPUG00000017929) Episquamata ANCESTRAL SPECIES 4 ENSGT00980000199506 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 ENSGT00960000189495 Laterata ANCESTRAL SPECIES 1 ENSGT00390000004860.gb ENSGT00390000004860.fb ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000156062 #18 ENSGT00940000159798 #17 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00940000163561 ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 ENSGT00960000189495 Common wall lizard MODERN SPECIES 10 ENSPMRG00000012475 ATP2B2 (ENSPMRG00000012496) SLC6A11 (ENSPMRG00000012549) SLC6A1 (ENSPMRG00000012556) ENSPMRG00000012565 HRH1 (ENSPMRG00000012568) #11 ATG7 (ENSPMRG00000012572) #12 VGLL4 (ENSPMRG00000012585) #13 TAMM41 (ENSPMRG00000012590) #14 SYN2 (ENSPMRG00000012608) #18 TIMP4 (ENSPMRG00000012664) #17 ENSPMRG00000012669 PPARG (ENSPMRG00000012674) #19 TSEN2 (ENSPMRG00000012682) #20 MKRN2OS (ENSPMRG00000012689) #21 MKRN2 (ENSPMRG00000012692) #22 RAF1 (ENSPMRG00000012698) #23 ENSPMRG00000012709 ISY1 (ENSPMRG00000012711) ENSPMRG00000012718 RAB43 (ENSPMRG00000012725) ENSPMRG00000012727 GP9 (ENSPMRG00000012730) ENSPMRG00000012736 ENSPMRG00000012740 EFCC1 (ENSPMRG00000012744) CFAP92 (ENSPMRG00000012752) ACAD9 (ENSPMRG00000012761) IQSEC1 (ENSPMRG00000012774) NUP210 (ENSPMRG00000012830) FBLN2 (ENSPMRG00000013185) Argentine black and white tegu MODERN SPECIES 8 ENSSMRG00000014853 RPL29 (ENSSMRG00000014854) IARS1 (ENSSMRG00000014856) ENSSMRG00000014887 SLC6A11 (ENSSMRG00000019567) SLC6A1 (ENSSMRG00000019568) HRH1 (ENSSMRG00000019569) #11 ATG7 (ENSSMRG00000019571) #12 VGLL4 (ENSSMRG00000019572) #13 TAMM41 (ENSSMRG00000019573) #14 SYN2 (ENSSMRG00000019575) #18 TIMP4 (ENSSMRG00000019576) #17 PPARG (ENSSMRG00000019578) #19 TSEN2 (ENSSMRG00000019579) #20 MKRN2OS (ENSSMRG00000019580) #21 MKRN2 (ENSSMRG00000019581) #22 RAF1 (ENSSMRG00000019582) #23 ENSSMRG00000019583 ISY1 (ENSSMRG00000019584) ENSSMRG00000019585 RAB43 (ENSSMRG00000019586) ENSSMRG00000019587 GP9 (ENSSMRG00000019588) ENSSMRG00000019589 ENSSMRG00000019590 ACAD9 (ENSSMRG00000019591) IQSEC1 (ENSSMRG00000019592) NUP210 (ENSSMRG00000019594) FBLN2 (ENSSMRG00000019596) ENSSMRG00000019598 WNT7A (ENSSMRG00000019599) Toxicofera ANCESTRAL SPECIES 3 ENSGT00980000199506 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569 ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062 #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 ENSGT00960000189495 Elapidae ANCESTRAL SPECIES 2 ENSGT00940000157238 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569.d ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062.k #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 ENSGT00960000189495 Indian cobra MODERN SPECIES 1 ENSNNAG00000000435 IARS1 (ENSNNAG00000018371) ENSNNAG00000018337 ATP2B2 (ENSNNAG00000018213) SLC6A11 (ENSNNAG00000018147) SLC6A1 (ENSNNAG00000018109) HRH1 (ENSNNAG00000018100) #11 ATG7 (ENSNNAG00000018034) #12 VGLL4 (ENSNNAG00000018012) #13 TAMM41 (ENSNNAG00000018006) #14 ENSNNAG00000018001 #17 SYN2 (ENSNNAG00000017991) #18 PPARG (ENSNNAG00000017984) #19 TSEN2 (ENSNNAG00000017971) #20 MKRN2OS (ENSNNAG00000017966) #21 MKRN2 (ENSNNAG00000017961) #22 RAF1 (ENSNNAG00000017955) #23 ENSNNAG00000017950 ENSNNAG00000017946 ISY1 (ENSNNAG00000017943) ENSNNAG00000017924 RAB43 (ENSNNAG00000017921) ENSNNAG00000017919 ENSNNAG00000017916 EFCC1 (ENSNNAG00000017915) CFAP92 (ENSNNAG00000017912) ACAD9 (ENSNNAG00000017867) IQSEC1 (ENSNNAG00000017851) NUP210 (ENSNNAG00000017830) ENSNNAG00000017810 FBLN2 (ENSNNAG00000017789) Elapidae_a ANCESTRAL SPECIES 8 ENSGT00940000157238 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569.d ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062.k #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 ENSGT00960000189495 Acanthophiinae ANCESTRAL SPECIES 10 ENSGT00940000157238 ENSGT00390000004860 ENSGT00550000074921 ENSGT00940000161461 ENSGT00940000157569.d ENSGT00940000156027 ENSGT00940000160690 #11 ENSGT00390000017509 #12 ENSGT00390000003282.B #13 ENSGT00390000000616 #14 ENSGT00940000159798 #17 ENSGT00940000156062.k #18 ENSGT00940000158273 #19 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A ENSGT00390000014109.d ENSGT00940000164112.a ENSGT00940000161980 ENSGT00530000064244.a ENSGT00950000183014.f.b.a.b ENSGT00390000008330 ENSGT00940000157312 ENSGT00940000156915 ENSGT00390000009491.d ENSGT00940000156047 ENSGT00940000158523 ENSGT00940000162955 ENSGT00960000189495 Mainland tiger snake MODERN SPECIES 2 ENSNSUG00000020113 #18 PPARG (ENSNSUG00000020114) #19 TSEN2 (ENSNSUG00000020115) #20 ENSNSUG00000020116 MKRN2 (ENSNSUG00000020117) #22 RAF1 (ENSNSUG00000020119) #23 ENSNSUG00000020120 ISY1 (ENSNSUG00000020121) ENSNSUG00000020122 RAB43 (ENSNSUG00000020123) ENSNSUG00000020124 GP9 (ENSNSUG00000020125) ENSNSUG00000020128 ACAD9 (ENSNSUG00000020129) IQSEC1 (ENSNSUG00000020130) ENSNSUG00000020131 NUP210 (ENSNSUG00000020136) FBLN2 (ENSNSUG00000020149) WNT7A (ENSNSUG00000020150) ENSNSUG00000020151 Eastern brown snake MODERN SPECIES 3 OGN (ENSPTXG00000009501) NOL8 (ENSPTXG00000009500) IARS1 (ENSPTXG00000009498) ATP2B2 (ENSPTXG00000007129) SLC6A11 (ENSPTXG00000007128) SLC6A1 (ENSPTXG00000007090) HRH1 (ENSPTXG00000007087) #11 ATG7 (ENSPTXG00000007086) #12 VGLL4 (ENSPTXG00000007085) #13 TAMM41 (ENSPTXG00000007075) #14 ENSPTXG00000007073 #17 SYN2 (ENSPTXG00000007068) #18 PPARG (ENSPTXG00000007067) #19 TSEN2 (ENSPTXG00000007066) #20 MKRN2OS (ENSPTXG00000007065) #21 MKRN2 (ENSPTXG00000007064) #22 RAF1 (ENSPTXG00000007063) #23 ENSPTXG00000007062 ISY1 (ENSPTXG00000007061) ENSPTXG00000007055 RAB43 (ENSPTXG00000007054) ENSPTXG00000007053 GP9 (ENSPTXG00000007052) EFCC1 (ENSPTXG00000007051) CFAP92 (ENSPTXG00000007050) ACAD9 (ENSPTXG00000007049) IQSEC1 (ENSPTXG00000006860) NUP210 (ENSPTXG00000006850) FBLN2 (ENSPTXG00000006820) WNT7A (ENSPTXG00000006810) ENSPTXG00000006808 Blue-lipped sea krait MODERN SPECIES 9066 MKRN2 (ENSLLTG00000012312) #22 RAF1 (ENSLLTG00000012297) #23 Lizard MODERN SPECIES 1 SLC6A1 (ENSACAG00000010020) ENSACAG00000035306 ENSACAG00000036621 ENSACAG00000043799 HRH1 (ENSACAG00000010219) #11 ATG7 (ENSACAG00000010224) #12 VGLL4 (ENSACAG00000010299) #13 TAMM41 (ENSACAG00000010318) #14 SYN2 (ENSACAG00000013404) #18 ENSACAG00000028862 TIMP4 (ENSACAG00000013457) #17 PPARG (ENSACAG00000013360) #19 TSEN2 (ENSACAG00000013345) #20 MKRN2OS (ENSACAG00000029532) #21 RAF1 (ENSACAG00000013194) #23 MKRN2 (ENSACAG00000013310) #22 ENSACAG00000038503 ISY1 (ENSACAG00000013166) ENSACAG00000013142 ENSACAG00000013126 ENSACAG00000013124 GP9 (ENSACAG00000022777) ENSACAG00000013121 ENSACAG00000013119 ACAD9 (ENSACAG00000012998) ENSACAG00000012926 ENSACAG00000045372 ENSACAG00000043082 ENSACAG00000043115 ENSACAG00000044780 ENSACAG00000036925 Anura ANCESTRAL SPECIES 338 ENSGT00390000014109 ENSGT00390000013266 #20 ENSGT00390000003839 #21 ENSGT00950000183077.a.b #22 ENSGT00940000156084 #23 ENSGT00950000183041.A Leishan spiny toad MODERN SPECIES 11 SLC25A6 (ENSLLEG00000028913) ENSLLEG00000028726 ENSLLEG00000028682 ENSLLEG00000028673 IVNS1ABP (ENSLLEG00000028612) GLRX2 (ENSLLEG00000028565) CDC73 (ENSLLEG00000028448) ENSLLEG00000028405 MITF (ENSLLEG00000028151) ENSLLEG00000028107 RAB43 (ENSLLEG00000028054) ENSLLEG00000028000 ISY1 (ENSLLEG00000027932) ENSLLEG00000027826 #20 MKRN2OS (ENSLLEG00000027800) #21 MKRN2 (ENSLLEG00000027692) #22 ENSLLEG00000027659 RAF1 (ENSLLEG00000027363) #23 ENSLLEG00000027044 ARL6IP5 (ENSLLEG00000026982) LMOD3 (ENSLLEG00000026945) ENSLLEG00000026927 FRMD4B (ENSLLEG00000026638) ENSLLEG00000026610 ENSLLEG00000026565 ENSLLEG00000026482 GP9 (ENSLLEG00000026438) ENSLLEG00000026375 ENSLLEG00000026113 ACAD9 (ENSLLEG00000025523) IQSEC1 (ENSLLEG00000024615) Frog MODERN SPECIES 4 STAB1 (ENSXETG00000044486) NT5DC2 (ENSXETG00000047019) pbrm1 (ENSXETG00000013671) ENSXETG00000043218 ENSXETG00000049370 glt8d1 (ENSXETG00000042897) spcs1 (ENSXETG00000013668) gnl3 (ENSXETG00000013669) nek4 (ENSXETG00000006888) ENSXETG00000046560 itih3 (ENSXETG00000006887) ENSXETG00000042890 mkrn2os (ENSXETG00000041950) #21 mkrn2 (ENSXETG00000043301) #22 raf1 (ENSXETG00000020163) #23 pparg (ENSXETG00000017422) #19 ENSXETG00000038805 ENSXETG00000042389 ENSXETG00000043200 ENSXETG00000045029 nisch (ENSXETG00000021467) uqcrc1 (ENSXETG00000021470) ENSXETG00000045653 ENSXETG00000045682 ENSXETG00000049123 XB5944457 [provisional] (ENSXETG00000012105) ENSXETG00000041612 ENSXETG00000024197 wnt7a (ENSXETG00000042176) Coelacanth MODERN SPECIES 1258 ENSLACG00000011638 #18 TIMP4 (ENSLACG00000010983) #17 ENSLACG00000010251 #18 PPARG (ENSLACG00000009212) #19 TSEN2 (ENSLACG00000008466) #20 MKRN2 (ENSLACG00000007834) #22 RAF1 (ENSLACG00000007082) #23 ENSLACG00000006992 cnbpb (ENSLACG00000005327) ISY1 (ENSLACG00000004490) zgc:77375 (ENSLACG00000003572) RAB43 (ENSLACG00000002676) ENSLACG00000000602