Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT00950000182953.A	ENSGT00390000009940	ENSGT00940000159207 #10	ENSGT00430000031142 #11	ENSGT00940000160306 #12	ENSGT00940000161562 #13	ENSGT00390000008812.a #14	ENSGT00940000160299 #15	ENSGT00940000159281 #16	ENSGT00950000183019.f.b.b	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000157916 #18	ENSGT00940000158375 #19	ENSGT00390000001557 #20	ENSGT00390000005415 #21	ENSGT00940000163279 #22	ENSGT00940000156180 #23	ENSGT00390000001225 #24	ENSGT00940000158091 #25	ENSGT00940000160544 #26	ENSGT01040000240451.a.a	ENSGT00940000160799	ENSGT00940000154101.a	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #27	ENSGT00940000153648.a	ENSGT00390000010256	ENSGT00390000016794.a.a ##28	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539 #31
Cetacea	ANCESTRAL SPECIES	14	ENSGT00950000182953.A	ENSGT00390000009940	ENSGT00940000159207 #10	ENSGT00430000031142 #11	ENSGT00940000160306 #12	ENSGT00940000161562 #13	ENSGT00390000008812.a #14	ENSGT00940000160299 #15	ENSGT00940000159281 #16	ENSGT00950000183019.f.b.b	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000157916 #18	ENSGT00940000158375 #19	ENSGT00390000001557 #20	ENSGT00390000005415 #21	ENSGT00940000163279 #22	ENSGT00940000156180 #23	ENSGT00390000001225 #24	ENSGT00940000158091 #25	ENSGT00940000160544 #26	ENSGT01040000240451.a.a	ENSGT00940000160799	ENSGT00940000154101.a	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #27	ENSGT00940000153648.a	ENSGT00390000010256	ENSGT00390000016794.a.a ##28	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539 #31
Odontoceti	ANCESTRAL SPECIES	13	ENSGT00950000182953.A	ENSGT00390000009940	ENSGT00940000159207 #10	ENSGT00430000031142 #11	ENSGT00940000160306 #12	ENSGT00940000161562 #13	ENSGT00390000008812.a #14	ENSGT00940000160299 #15	ENSGT00940000159281 #16	ENSGT00950000183019.f.b.b	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000157916 #18	ENSGT00940000158375 #19	ENSGT00390000001557 #20	ENSGT00390000005415 #21	ENSGT00940000163279 #22	ENSGT00940000156180 #23	ENSGT00390000001225 #24	ENSGT00940000158091 #25	ENSGT00940000160544 #26	ENSGT01040000240451.a.a	ENSGT00940000160799	ENSGT00940000154101.a	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #27	ENSGT00940000153648.a	ENSGT00390000010256	ENSGT00390000016794.a.a ##28	ENSGT00940000154044.a.b	ENSGT00940000155400.B	ENSGT00390000000539 #31
Sperm whale	MODERN SPECIES	11	PTPRN (ENSPCTG00005019662) #7	ENSPCTG00005019597 #8	ENSPCTG00005019578 #9	IHH (ENSPCTG00005019553) #10	CFAP65 (ENSPCTG00005019150) #11	CRYBA2 (ENSPCTG00005019097) #12	FEV (ENSPCTG00005019061) #13	CDK5R2 (ENSPCTG00005019049) #14	WNT10A (ENSPCTG00005019019) #15	WNT6 (ENSPCTG00005018979) #16	ENSPCTG00005018949 #17	TTLL4 (ENSPCTG00005018815) #18	STK36 (ENSPCTG00005018735) #19	RNF25 (ENSPCTG00005018698) #20	BCS1L (ENSPCTG00005018671) #21	ZNF142 (ENSPCTG00005018649) #22	PLCD4 (ENSPCTG00005018288) #23	CNOT9 (ENSPCTG00005018215) #24	USP37 (ENSPCTG00005017971) #25	VIL1 (ENSPCTG00005017833) #26	PNKD (ENSPCTG00005017792) #27	ENSPCTG00005017764 #28	ENSPCTG00005017711 #29	ENSPCTG00005017699 #30	TNP1 (ENSPCTG00005017658) #31	RPL37A (ENSPCTG00005017558) #32	MARCH4 (ENSPCTG00005017507) #33	XRCC5 (ENSPCTG00005017451) #34	TMEM169 (ENSPCTG00005017414) #35	PECR (ENSPCTG00005017315) #36	MREG (ENSPCTG00005017221) #37
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT00950000182953.A	ENSGT00390000009940	ENSGT00940000159207 #10	ENSGT00430000031142 #11	ENSGT00940000160306 #12	ENSGT00940000161562 #13	ENSGT00390000008812.a #14	ENSGT00940000160299 #15	ENSGT00940000159281 #16	ENSGT00950000183019.f.b.b	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000157916 #18	ENSGT00940000158375 #19	ENSGT00390000001557 #20	ENSGT00390000005415 #21	ENSGT00940000163279 #22	ENSGT00940000156180 #23	ENSGT00390000001225 #24	ENSGT00940000158091 #25	ENSGT00940000160544 #26	ENSGT01040000240451.a.a	ENSGT00940000160799	ENSGT00940000154101.a	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #27	ENSGT00940000153648.a	ENSGT00390000010256	ENSGT00390000016794.b #28	ENSGT01050000244848.A.a.h.j #29	ENSGT01050000244848.A.a.h.i #29	ENSGT00940000154044.a.b
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT00950000182953.A	ENSGT00390000009940	ENSGT00940000159207 #10	ENSGT00430000031142 #11	ENSGT00940000160306 #12	ENSGT00940000161562 #13	ENSGT00390000008812.a #14	ENSGT00940000160299 #15	ENSGT00940000159281 #16	ENSGT00950000183019.f.b.b	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000157916 #18	ENSGT00940000158375 #19	ENSGT00390000001557 #20	ENSGT00390000005415 #21	ENSGT00940000163279 #22	ENSGT00940000156180 #23	ENSGT00390000001225 #24	ENSGT00940000158091 #25	ENSGT00940000160544 #26	ENSGT01040000240451.a.a	ENSGT00940000160799	ENSGT00940000154101.a	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #27	ENSGT00940000153648.a	ENSGT00390000010256	ENSGT00390000016794.b #28	ENSGT01050000244848.A.a.h.j #29	ENSGT01050000244848.A.a.h.i #29	ENSGT00940000154044.a.b
Monodontidae	ANCESTRAL SPECIES	10	ENSGT00950000182953.A	ENSGT00390000009940	ENSGT00940000159207 #10	ENSGT00430000031142 #11	ENSGT00940000160306 #12	ENSGT00940000161562 #13	ENSGT00390000008812.a #14	ENSGT00940000160299 #15	ENSGT00940000159281 #16	ENSGT00950000183019.f.b.b	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000157916 #18	ENSGT00940000158375 #19	ENSGT00390000001557 #20	ENSGT00390000005415 #21	ENSGT00940000163279 #22	ENSGT00940000156180 #23	ENSGT00390000001225 #24	ENSGT00940000158091 #25	ENSGT00940000160544 #26	ENSGT01040000240451.a.a	ENSGT00940000160799	ENSGT00940000154101.a	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #27	ENSGT00940000153648.a	ENSGT00390000010256	ENSGT00390000016794.b #28	ENSGT01050000244848.A.a.h.j #29	ENSGT01050000244848.A.a.h.i #29	ENSGT00940000154044.a.b
Beluga whale	MODERN SPECIES	84	SLC23A3 (ENSDLEG00000018960)	NHEJ1 (ENSDLEG00000018950)	IHH (ENSDLEG00000018943) #10	CFAP65 (ENSDLEG00000018889) #11	CRYBA2 (ENSDLEG00000018870) #12	FEV (ENSDLEG00000018865) #13	CDK5R2 (ENSDLEG00000018862) #14	WNT10A (ENSDLEG00000018857) #15	WNT6 (ENSDLEG00000018852) #16	PRKAG3 (ENSDLEG00000018828)	CYP27A1 (ENSDLEG00000018796)	TTLL4 (ENSDLEG00000018443) #18	STK36 (ENSDLEG00000018011) #19	RNF25 (ENSDLEG00000017931) #20	BCS1L (ENSDLEG00000017902) #21	ZNF142 (ENSDLEG00000017809) #22	PLCD4 (ENSDLEG00000016975) #23	CNOT9 (ENSDLEG00000016927) #24	USP37 (ENSDLEG00000016872) #25	VIL1 (ENSDLEG00000016736) #26	CTDSP1 (ENSDLEG00000016713)	SLC11A1 (ENSDLEG00000012093)	CATIP (ENSDLEG00000012018)	TMBIM1 (ENSDLEG00000011997)	PNKD (ENSDLEG00000011967) #27	AAMP (ENSDLEG00000011948)	GPBAR1 (ENSDLEG00000011941)	ARPC2 (ENSDLEG00000011925) #28	ENSDLEG00000011912 #29	CXCR2 (ENSDLEG00000011899) #29	RUFY4 (ENSDLEG00000011866)
Narwhal	MODERN SPECIES	302	SLC23A3 (ENSMMNG00015005390)	NHEJ1 (ENSMMNG00015005440)	IHH (ENSMMNG00015005455) #10	CFAP65 (ENSMMNG00015005484) #11	CRYBA2 (ENSMMNG00015005549) #12	FEV (ENSMMNG00015005567) #13	CDK5R2 (ENSMMNG00015005580) #14	WNT10A (ENSMMNG00015005592) #15	WNT6 (ENSMMNG00015005610) #16	PRKAG3 (ENSMMNG00015005637)	CYP27A1 (ENSMMNG00015005674)	TTLL4 (ENSMMNG00015005749) #18	STK36 (ENSMMNG00015005870) #19	RNF25 (ENSMMNG00015005924) #20	BCS1L (ENSMMNG00015005949) #21	ENSMMNG00015005968 #22	PLCD4 (ENSMMNG00015006009) #23	CNOT9 (ENSMMNG00015006070) #24	USP37 (ENSMMNG00015006111) #25	VIL1 (ENSMMNG00015006174) #26	CTDSP1 (ENSMMNG00015006213)	SLC11A1 (ENSMMNG00015006247)	CATIP (ENSMMNG00015006268)	PNKD (ENSMMNG00015006301) #27	TMBIM1 (ENSMMNG00015006338)	AAMP (ENSMMNG00015006366)	GPBAR1 (ENSMMNG00015006403)	ARPC2 (ENSMMNG00015006416) #28	ENSMMNG00015006445 #29	ENSMMNG00015006453 #29	RUFY4 (ENSMMNG00015006488)
Vaquita	MODERN SPECIES	18	NHEJ1 (ENSPSNG00000010446)	IHH (ENSPSNG00000010524) #10	CFAP65 (ENSPSNG00000010593) #11	CRYBA2 (ENSPSNG00000011122) #12	FEV (ENSPSNG00000011170) #13	CDK5R2 (ENSPSNG00000011232) #14	WNT10A (ENSPSNG00000011245) #15	WNT6 (ENSPSNG00000011297) #16	PRKAG3 (ENSPSNG00000011370)	CYP27A1 (ENSPSNG00000011602)	TTLL4 (ENSPSNG00000011722) #18	STK36 (ENSPSNG00000011860) #19	RNF25 (ENSPSNG00000011955) #20	BCS1L (ENSPSNG00000012039) #21	ENSPSNG00000012088	ENSPSNG00000012152 #22	PLCD4 (ENSPSNG00000012217) #23	CNOT9 (ENSPSNG00000012552) #24	USP37 (ENSPSNG00000012626) #25	VIL1 (ENSPSNG00000012747) #26	CTDSP1 (ENSPSNG00000013075)	SLC11A1 (ENSPSNG00000013161)	CATIP (ENSPSNG00000013342)	PNKD (ENSPSNG00000013524) #27	TMBIM1 (ENSPSNG00000013684)	AAMP (ENSPSNG00000013763)	GPBAR1 (ENSPSNG00000014071)	ARPC2 (ENSPSNG00000014103) #28	ENSPSNG00000014161 #29	ENSPSNG00000014184 #29	RUFY4 (ENSPSNG00000014217)
Dolphin	MODERN SPECIES	206													STK36 (ENSTTRG00000010816) #19	RNF25 (ENSTTRG00000010815) #20	BCS1L (ENSTTRG00000010814) #21	ENSTTRG00000010810 #22	PLCD4 (ENSTTRG00000010805) #23	CNOT9 (ENSTTRG00000010801) #24	USP37 (ENSTTRG00000010792) #25	VIL1 (ENSTTRG00000010749) #26
Pecora	ANCESTRAL SPECIES	16	ENSGT00950000182953.A	ENSGT00390000009940	ENSGT00940000159207 #10	ENSGT00430000031142 #11	ENSGT00940000160306 #12	ENSGT00940000161562 #13	ENSGT00390000008812.a #14	ENSGT00940000160299 #15	ENSGT00940000159281 #16	ENSGT00950000183019.f.b.b	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000157916 #18	ENSGT00940000158375 #19	ENSGT00390000001557 #20	ENSGT00390000005415 #21	ENSGT00940000163279 #22	ENSGT00940000156180 #23	ENSGT00390000001225 #24	ENSGT00940000158091 #25	ENSGT00940000160544 #26	ENSGT01040000240451.a.a	ENSGT00940000160799	ENSGT00940000154101.a	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #27	ENSGT00940000153648.a	ENSGT00390000010256	ENSGT00390000016794.b #28	ENSGT01050000244848.A.a.h.n #29	ENSGT01050000244848.A.a.h.m #29	ENSGT00940000154044.a.b
Percora_a	ANCESTRAL SPECIES	5	ENSGT00950000182953.A	ENSGT00390000009940	ENSGT00940000159207 #10	ENSGT00430000031142 #11	ENSGT00940000160306 #12	ENSGT00940000161562 #13	ENSGT00390000008812.a #14	ENSGT00940000160299 #15	ENSGT00940000159281 #16	ENSGT00950000183019.f.b.b	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000157916 #18	ENSGT00940000158375 #19	ENSGT00390000001557 #20	ENSGT00390000005415 #21	ENSGT00940000163279 #22	ENSGT00940000156180 #23	ENSGT00390000001225 #24	ENSGT00940000158091 #25	ENSGT00940000160544 #26	ENSGT01040000240451.a.a	ENSGT00940000160799	ENSGT00940000154101.a	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #27	ENSGT00940000153648.a	ENSGT00390000010256	ENSGT00390000016794.b #28	ENSGT01050000244848.A.a.h.n #29	ENSGT01050000244848.A.a.h.m #29	ENSGT00940000154044.a.b
Bovidae	ANCESTRAL SPECIES	8	ENSGT00950000182953.A	ENSGT00390000009940	ENSGT00940000159207 #10	ENSGT00430000031142 #11	ENSGT00940000160306 #12	ENSGT00940000161562 #13	ENSGT00390000008812.a #14	ENSGT00940000160299 #15	ENSGT00940000159281 #16	ENSGT00950000183019.f.b.b	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000157916 #18	ENSGT00940000158375 #19	ENSGT00390000001557 #20	ENSGT00390000005415 #21	ENSGT00940000163279 #22	ENSGT00940000156180 #23	ENSGT00390000001225 #24	ENSGT00940000158091 #25	ENSGT00940000160544 #26	ENSGT01040000240451.a.a	ENSGT00940000160799	ENSGT00940000154101.a	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #27	ENSGT00940000153648.a	ENSGT00390000010256	ENSGT00390000016794.b #28	ENSGT01050000244848.A.a.h.n #29	ENSGT01050000244848.A.a.h.m #29	ENSGT00940000154044.a.b
Caprinae	ANCESTRAL SPECIES	5	ENSGT00950000182953.A	ENSGT00390000009940	ENSGT00940000159207 #10	ENSGT00430000031142 #11	ENSGT00940000160306 #12	ENSGT00940000161562 #13	ENSGT00390000008812.a #14	ENSGT00940000160299 #15	ENSGT00940000159281 #16	ENSGT00950000183019.f.b.b	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000157916 #18	ENSGT00940000158375 #19	ENSGT00390000001557 #20	ENSGT00390000005415 #21	ENSGT00940000163279 #22	ENSGT00940000156180 #23	ENSGT00390000001225 #24	ENSGT00940000158091 #25	ENSGT00940000160544 #26	ENSGT01040000240451.a.a	ENSGT00940000160799	ENSGT00940000154101.a	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #27	ENSGT00940000153648.a	ENSGT00390000010256	ENSGT00390000016794.b.p.a #28	ENSGT01050000244848.A.a.h.n #29	ENSGT01050000244848.A.a.h.m #29	ENSGT00940000154044.a.b
Rambouillet Sheep	MODERN SPECIES	11	CNPPD1 (ENSOARG00020010841)	NHEJ1 (ENSOARG00020009824)	IHH (ENSOARG00020009787) #10	CFAP65 (ENSOARG00020009094) #11	CRYBA2 (ENSOARG00020009010) #12	FEV (ENSOARG00020008978) #13	CDK5R2 (ENSOARG00020008961) #14	WNT10A (ENSOARG00020008936) #15	WNT6 (ENSOARG00020008888) #16	PRKAG3 (ENSOARG00020008702)	CYP27A1 (ENSOARG00020008639)	TTLL4 (ENSOARG00020008478) #18	STK36 (ENSOARG00020008297) #19	RNF25 (ENSOARG00020008163) #20	BCS1L (ENSOARG00020008102) #21	ENSOARG00020008046 #22	PLCD4 (ENSOARG00020007976) #23	CNOT9 (ENSOARG00020007920) #24	USP37 (ENSOARG00020007519) #25	VIL1 (ENSOARG00020007377) #26	ENSOARG00020007316	CTDSP1 (ENSOARG00020007259)	SLC11A1 (ENSOARG00020007179)	ENSOARG00020007154	CATIP (ENSOARG00020007041)	TMBIM1 (ENSOARG00020006961)	PNKD (ENSOARG00020006707) #27	AAMP (ENSOARG00020006548)	ENSOARG00020025604 #28	ENSOARG00020025600 #29	ENSOARG00020025597 #29
Goat	MODERN SPECIES	11	SLC23A3 (ENSCHIG00000014898)	NHEJ1 (ENSCHIG00000014914)	IHH (ENSCHIG00000016564) #10	CFAP65 (ENSCHIG00000015285) #11	CRYBA2 (ENSCHIG00000020371) #12	FEV (ENSCHIG00000015312) #13	CDK5R2 (ENSCHIG00000012592) #14	WNT10A (ENSCHIG00000022853) #15	WNT6 (ENSCHIG00000023410) #16	PRKAG3 (ENSCHIG00000023341)	CYP27A1 (ENSCHIG00000025011)	TTLL4 (ENSCHIG00000022274) #18	STK36 (ENSCHIG00000020004) #19	RNF25 (ENSCHIG00000010384) #20	BCS1L (ENSCHIG00000009282) #21	ENSCHIG00000022713 #22	PLCD4 (ENSCHIG00000022545) #23	CNOT9 (ENSCHIG00000026257) #24	USP37 (ENSCHIG00000007660) #25	VIL1 (ENSCHIG00000016310) #26	CTDSP1 (ENSCHIG00000022405)	SLC11A1 (ENSCHIG00000017190)	ENSCHIG00000003580	CATIP (ENSCHIG00000017568)	PNKD (ENSCHIG00000002862) #27	TMBIM1 (ENSCHIG00000025349)	AAMP (ENSCHIG00000024008)	GPBAR1 (ENSCHIG00000025833)	ENSCHIG00000007721 #28	ENSCHIG00000002910	ENSCHIG00000012101 #29
Bovinae	ANCESTRAL SPECIES	5	ENSGT00950000182953.A	ENSGT00390000009940	ENSGT00940000159207 #10	ENSGT00430000031142 #11	ENSGT00940000160306 #12	ENSGT00940000161562 #13	ENSGT00390000008812.a #14	ENSGT00940000160299 #15	ENSGT00940000159281 #16	ENSGT00950000183019.f.b.b	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000157916 #18	ENSGT00940000158375 #19	ENSGT00390000001557 #20	ENSGT00390000005415 #21	ENSGT00940000163279 #22	ENSGT00940000156180 #23	ENSGT00390000001225 #24	ENSGT00940000158091 #25	ENSGT00940000160544 #26	ENSGT01040000240451.a.a	ENSGT00940000160799	ENSGT00940000154101.a	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #27	ENSGT00940000153648.a	ENSGT00390000010256	ENSGT00390000016794.b #28	ENSGT01050000244848.A.a.h.n.a #29	ENSGT01050000244848.A.a.h.n.b #29	ENSGT00940000154044.a.b
Bos	ANCESTRAL SPECIES	6	ENSGT00950000182953.A	ENSGT00390000009940	ENSGT00940000159207 #10	ENSGT00430000031142 #11	ENSGT00940000160306 #12	ENSGT00940000161562 #13	ENSGT00390000008812.a #14	ENSGT00940000160299 #15	ENSGT00940000159281 #16	ENSGT00950000183019.f.b.b	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000157916 #18	ENSGT00940000158375 #19	ENSGT00390000001557 #20	ENSGT00390000005415 #21	ENSGT00940000163279 #22	ENSGT00940000156180 #23	ENSGT00390000001225 #24	ENSGT00940000158091 #25	ENSGT00940000160544 #26	ENSGT01040000240451.a.a	ENSGT00940000160799	ENSGT00940000154101.a	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #27	ENSGT00940000153648.a	ENSGT00390000010256	ENSGT00390000016794.b #28	ENSGT01050000244848.A.a.h.n.a #29	ENSGT01050000244848.A.a.h.n.b #29	ENSGT00940000154044.a.b
Bos_a	ANCESTRAL SPECIES	4	ENSGT00950000182953.A	ENSGT00390000009940	ENSGT00940000159207 #10	ENSGT00430000031142 #11	ENSGT00940000160306 #12	ENSGT00940000161562 #13	ENSGT00390000008812.a #14	ENSGT00940000160299 #15	ENSGT00940000159281 #16	ENSGT00950000183019.f.b.b	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000157916 #18	ENSGT00940000158375 #19	ENSGT00390000001557 #20	ENSGT00390000005415 #21	ENSGT00940000163279 #22	ENSGT00940000156180 #23	ENSGT00390000001225 #24	ENSGT00940000158091 #25	ENSGT00940000160544 #26	ENSGT01040000240451.a.a	ENSGT00940000160799	ENSGT00940000154101.a	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #27	ENSGT00940000153648.a	ENSGT00390000010256	ENSGT00390000016794.b #28	ENSGT01050000244848.A.a.h.n.a #29	ENSGT01050000244848.A.a.h.n.b #29	ENSGT00940000154044.a.b
Domestic yak	MODERN SPECIES	11	CNPPD1 (ENSBGRG00000000191)	ENSBGRG00000000275	IHH (ENSBGRG00000000478) #10	CFAP65 (ENSBGRG00000000510) #11	CRYBA2 (ENSBGRG00000000636) #12	FEV (ENSBGRG00000000650) #13	CDK5R2 (ENSBGRG00000000662) #14	WNT10A (ENSBGRG00000000672) #15	WNT6 (ENSBGRG00000000692) #16	PRKAG3 (ENSBGRG00000000724)	CYP27A1 (ENSBGRG00000000784)	TTLL4 (ENSBGRG00000000831) #18	STK36 (ENSBGRG00000000918) #19	RNF25 (ENSBGRG00000001002) #20	BCS1L (ENSBGRG00000001040) #21	ENSBGRG00000001065 #22	PLCD4 (ENSBGRG00000001098) #23	CNOT9 (ENSBGRG00000001130) #24	USP37 (ENSBGRG00000001165) #25	VIL1 (ENSBGRG00000001312) #26	CTDSP1 (ENSBGRG00000001379)	SLC11A1 (ENSBGRG00000001439)	CATIP (ENSBGRG00000001579)	PNKD (ENSBGRG00000001618) #27	TMBIM1 (ENSBGRG00000001678)	AAMP (ENSBGRG00000001746)	GPBAR1 (ENSBGRG00000001769)	ARPC2 (ENSBGRG00000001784) #28	ENSBGRG00000001827 #29	ENSBGRG00000001832 #29	RUFY4 (ENSBGRG00000001855)
Wild yak	MODERN SPECIES	262	NHEJ1 (ENSBMUG00000026054)	IHH (ENSBMUG00000026052) #10	CFAP65 (ENSBMUG00000026047) #11	CRYBA2 (ENSBMUG00000026021) #12	FEV (ENSBMUG00000026019) #13	ENSBMUG00000026015 #14	WNT10A (ENSBMUG00000026013) #15	WNT6 (ENSBMUG00000026009) #16	PRKAG3 (ENSBMUG00000026007)	CYP27A1 (ENSBMUG00000026005)	ENSBMUG00000025993	TTLL4 (ENSBMUG00000025991) #18	STK36 (ENSBMUG00000025981) #19	RNF25 (ENSBMUG00000025976) #20	BCS1L (ENSBMUG00000025973) #21	ENSBMUG00000025970 #22	PLCD4 (ENSBMUG00000025954) #23	CNOT9 (ENSBMUG00000025942) #24	USP37 (ENSBMUG00000025936) #25	VIL1 (ENSBMUG00000025916) #26	CTDSP1 (ENSBMUG00000025903)	SLC11A1 (ENSBMUG00000025898)	CATIP (ENSBMUG00000025893)	ENSBMUG00000025887	TMBIM1 (ENSBMUG00000025882)	PNKD (ENSBMUG00000025880) #27	AAMP (ENSBMUG00000025870)	GPBAR1 (ENSBMUG00000025868)	ARPC2 (ENSBMUG00000025863) #28	ENSBMUG00000025858 #29	ENSBMUG00000025854 #29
Bos_b	ANCESTRAL SPECIES	20	ENSGT00950000182953.A	ENSGT00390000009940	ENSGT00940000159207 #10	ENSGT00430000031142 #11	ENSGT00940000160306 #12	ENSGT00940000161562 #13	ENSGT00390000008812.a #14	ENSGT00940000160299 #15	ENSGT00940000159281 #16	ENSGT00950000183019.f.b.b	ENSGT00950000182905.a.a.a.a.b	ENSGT00940000157916 #18	ENSGT00940000158375 #19	ENSGT00390000001557 #20	ENSGT00390000005415 #21	ENSGT00940000163279 #22	ENSGT00940000156180 #23	ENSGT00390000001225 #24	ENSGT00940000158091 #25	ENSGT00940000160544 #26	ENSGT01040000240451.a.a	ENSGT00940000160799	ENSGT00940000154101.a	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #27	ENSGT00940000153648.a	ENSGT00390000010256	ENSGT00390000016794.b #28	ENSGT01050000244848.A.a.h.n.a #29	ENSGT01050000244848.A.a.h.n.b #29	ENSGT00940000154044.a.b
Cow	MODERN SPECIES	11	SLC23A3 (ENSBTAG00000012618)	NHEJ1 (ENSBTAG00000031041)	IHH (ENSBTAG00000008452) #10	CFAP65 (ENSBTAG00000026751) #11	CRYBA2 (ENSBTAG00000014819) #12	FEV (ENSBTAG00000020191) #13	CDK5R2 (ENSBTAG00000031052) #14	WNT10A (ENSBTAG00000009217) #15	WNT6 (ENSBTAG00000013990) #16	PRKAG3 (ENSBTAG00000013492)	CYP27A1 (ENSBTAG00000013489)	TTLL4 (ENSBTAG00000018415) #18	STK36 (ENSBTAG00000003819) #19	RNF25 (ENSBTAG00000003817) #20	BCS1L (ENSBTAG00000003813) #21	ZNF142 (ENSBTAG00000026772) #22	PLCD4 (ENSBTAG00000003809) #23	CNOT9 (ENSBTAG00000003807) #24	USP37 (ENSBTAG00000016572) #25	VIL1 (ENSBTAG00000018543) #26	CTDSP1 (ENSBTAG00000008362)	SLC11A1 (ENSBTAG00000015520)	CATIP (ENSBTAG00000003944)	PNKD (ENSBTAG00000003936) #27	TMBIM1 (ENSBTAG00000003935)	PNKD (ENSBTAG00000051631)	AAMP (ENSBTAG00000003927)	GPBAR1 (ENSBTAG00000003923)	ARPC2 (ENSBTAG00000010386) #28	CXCR1 (ENSBTAG00000026753) #29	CXCR2 (ENSBTAG00000038042) #29
Hybrid Bos Indicus	MODERN SPECIES	11	SLC23A3 (ENSBIXG00005003774)	NHEJ1 (ENSBIXG00005022226)	IHH (ENSBIXG00005022267) #10	CFAP65 (ENSBIXG00005022540) #11	CRYBA2 (ENSBIXG00005022597) #12	FEV (ENSBIXG00005022607) #13	CDK5R2 (ENSBIXG00005003865) #14	WNT10A (ENSBIXG00005022642) #15	WNT6 (ENSBIXG00005022659) #16	PRKAG3 (ENSBIXG00005022713)	CYP27A1 (ENSBIXG00005022772)	TTLL4 (ENSBIXG00005022832) #18	STK36 (ENSBIXG00005022916) #19	RNF25 (ENSBIXG00005022967) #20	BCS1L (ENSBIXG00005023013) #21	ENSBIXG00005023078 #22	PLCD4 (ENSBIXG00005023140) #23	CNOT9 (ENSBIXG00005023182) #24	USP37 (ENSBIXG00005023268) #25	VIL1 (ENSBIXG00005023329) #26	CTDSP1 (ENSBIXG00005023395)	SLC11A1 (ENSBIXG00005023464)	CATIP (ENSBIXG00005023503)	TMBIM1 (ENSBIXG00005007076)	PNKD (ENSBIXG00005023605) #27	AAMP (ENSBIXG00005004055)	GPBAR1 (ENSBIXG00005023695)	ARPC2 (ENSBIXG00005023758) #28	ENSBIXG00005005883 #29	ENSBIXG00005023802 #29	RUFY4 (ENSBIXG00005004085)
American bison	MODERN SPECIES	3330	CNPPD1 (ENSBBBG00000009454)	SLC23A3 (ENSBBBG00000009461)	NHEJ1 (ENSBBBG00000009466)	IHH (ENSBBBG00000009468) #10	CFAP65 (ENSBBBG00000009477) #11	CRYBA2 (ENSBBBG00000009479) #12	CDK5R2 (ENSBBBG00000009480) #14	WNT10A (ENSBBBG00000009483) #15	WNT6 (ENSBBBG00000009484) #16	PRKAG3 (ENSBBBG00000009488)	CYP27A1 (ENSBBBG00000009491)	TTLL4 (ENSBBBG00000009504) #18	STK36 (ENSBBBG00000001539) #19	RNF25 (ENSBBBG00000001540) #20	BCS1L (ENSBBBG00000009528) #21	ENSBBBG00000009542 #22	PLCD4 (ENSBBBG00000009557) #23	CNOT9 (ENSBBBG00000009564) #24	USP37 (ENSBBBG00000009603) #25	VIL1 (ENSBBBG00000009616) #26	CTDSP1 (ENSBBBG00000009622)	SLC11A1 (ENSBBBG00000009627)	CATIP (ENSBBBG00000009633)	TMBIM1 (ENSBBBG00000001560)	PNKD (ENSBBBG00000009649) #27	AAMP (ENSBBBG00000007245)	GPBAR1 (ENSBBBG00000009664)	ARPC2 (ENSBBBG00000009675) #28	ENSBBBG00000009678 #29	ENSBBBG00000001578 #29	RUFY4 (ENSBBBG00000009683)
Siberian musk deer	MODERN SPECIES	352	SLC23A3 (ENSMMSG00000018467)	NHEJ1 (ENSMMSG00000018435)	IHH (ENSMMSG00000018411) #10	CFAP65 (ENSMMSG00000018168) #11	CRYBA2 (ENSMMSG00000018103) #12	FEV (ENSMMSG00000018069) #13	CDK5R2 (ENSMMSG00000018049) #14	WNT10A (ENSMMSG00000018012) #15	WNT6 (ENSMMSG00000017986) #16	PRKAG3 (ENSMMSG00000017891)	CYP27A1 (ENSMMSG00000017780)	TTLL4 (ENSMMSG00000017658) #18	STK36 (ENSMMSG00000017568) #19	RNF25 (ENSMMSG00000017525) #20	BCS1L (ENSMMSG00000017492) #21	ENSMMSG00000017469 #22	PLCD4 (ENSMMSG00000017421) #23	CNOT9 (ENSMMSG00000017385) #24	USP37 (ENSMMSG00000017309) #25	VIL1 (ENSMMSG00000017148) #26	CTDSP1 (ENSMMSG00000017093)	SLC11A1 (ENSMMSG00000017070)	CATIP (ENSMMSG00000017022)	TMBIM1 (ENSMMSG00000016995)	PNKD (ENSMMSG00000016919) #27	AAMP (ENSMMSG00000016789)	GPBAR1 (ENSMMSG00000016766)	ARPC2 (ENSMMSG00000016731) #28	ENSMMSG00000016686	ENSMMSG00000016662 #29	ENSMMSG00000016647 #29
Yarkand deer	MODERN SPECIES	31	SLC23A3 (ENSCHYG00000000872)	NHEJ1 (ENSCHYG00000000939)	IHH (ENSCHYG00000000953) #10	CFAP65 (ENSCHYG00000000994) #11	CRYBA2 (ENSCHYG00000001123) #12	FEV (ENSCHYG00000001142) #13	ENSCHYG00000001150 #14	WNT10A (ENSCHYG00000001166) #15	WNT6 (ENSCHYG00000001192) #16	PRKAG3 (ENSCHYG00000001210)	CYP27A1 (ENSCHYG00000001246)	TTLL4 (ENSCHYG00000001312) #18	STK36 (ENSCHYG00000001439) #19	RNF25 (ENSCHYG00000001498) #20	BCS1L (ENSCHYG00000001534) #21	ENSCHYG00000001556 #22	PLCD4 (ENSCHYG00000001587) #23	CNOT9 (ENSCHYG00000001629) #24	USP37 (ENSCHYG00000001693) #25	VIL1 (ENSCHYG00000001829) #26	CTDSP1 (ENSCHYG00000001880)	SLC11A1 (ENSCHYG00000001919)	CATIP (ENSCHYG00000001958)	PNKD (ENSCHYG00000002024) #27	TMBIM1 (ENSCHYG00000002103)	AAMP (ENSCHYG00000002144)	GPBAR1 (ENSCHYG00000002188)	ENSCHYG00000002201 #28	ENSCHYG00000002280 #29	ENSCHYG00000002290 #29	RUFY4 (ENSCHYG00000002304)