Glires	ANCESTRAL SPECIES	6	ENSGT00940000162819	ENSGT00940000162402 #9	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT00390000015308	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT00940000163913	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT01030000234877
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000162819	ENSGT00940000162402 #9	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT00390000015308	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT00940000163913	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT01030000234877
Rodentia_B	ANCESTRAL SPECIES	20	ENSGT00940000162819	ENSGT00940000162402 #9	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT00390000015308	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #36
Myomorpha	ANCESTRAL SPECIES	20	ENSGT00940000162819	ENSGT00940000162402 #9	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT00390000015308	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #36
Muroidea	ANCESTRAL SPECIES	18	ENSGT00940000162819	ENSGT00940000162402 #9	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT00390000015308	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #36
Muroidea_A	ANCESTRAL SPECIES	20	ENSGT00940000162402 #9	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT00390000015308	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00800000125325 #15	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #36
Cricetidae	ANCESTRAL SPECIES	29	ENSGT00940000162402 #9	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT00390000015308	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00800000125325 #15	ENSGT00940000161392.f #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT00950000182772.A.a.a.b #36	ENSGT01030000234877
Cricetidae_B	ANCESTRAL SPECIES	41	ENSGT00940000162402 #9	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT00390000015308	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00800000125325 #15	ENSGT00940000161392.f #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT00950000182772.A.a.a.b #36	ENSGT01030000234877
Prairie vole	MODERN SPECIES	157	ENSMOCG00000011016 #7	ENSMOCG00000013084 #8	ENSMOCG00000017799 #9	ENSMOCG00000009964 #10	Zfp180 (ENSMOCG00000020832) #11	Ceacam20 (ENSMOCG00000012410) #12	ENSMOCG00000020241 #13	Ceacam16 (ENSMOCG00000019722) #14	Gm19345 (ENSMOCG00000006044) #15	Bcl3 (ENSMOCG00000015727) #16	Cblc (ENSMOCG00000000299) #17	Bcam (ENSMOCG00000010459) #18	Nectin2 (ENSMOCG00000006784) #19	Tomm40 (ENSMOCG00000010412) #20	Apoe (ENSMOCG00000001633) #21	Apoc1 (ENSMOCG00000010879) #22	Apoc4 (ENSMOCG00000015539) #23	Apoc2 (ENSMOCG00000010632) #24	Clptm1 (ENSMOCG00000015665) #25	Relb (ENSMOCG00000003754) #26	Clasrp (ENSMOCG00000007548) #27	Zfp296 (ENSMOCG00000000338) #28	Gemin7 (ENSMOCG00000019633) #29	Ppp1r37 (ENSMOCG00000009307) #30	Nkpd1 (ENSMOCG00000000052) #31	Trappc6a (ENSMOCG00000013206) #32	Bloc1s3 (ENSMOCG00000000204) #33	Exoc3l2 (ENSMOCG00000003076) #34	Mark4 (ENSMOCG00000006161) #35	Ckm (ENSMOCG00000020442) #36	Klc3 (ENSMOCG00000003970) #37
Cricetinae	ANCESTRAL SPECIES	42	ENSGT00940000162119	ENSGT00940000162819	ENSGT00940000162402 #9	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT00390000015308	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00940000161392.f #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #36
Golden Hamster	MODERN SPECIES	834	Irgq (ENSMAUG00000017882)	Irgc1 (ENSMAUG00000007910)	Kcnn4 (ENSMAUG00000008460)	Lypd5 (ENSMAUG00000008445)	Zfp61 (ENSMAUG00000007219)	ENSMAUG00000001537 #9	Zfp180 (ENSMAUG00000007945) #11	ENSMAUG00000009160	Ceacam16 (ENSMAUG00000010901) #14	Bcl3 (ENSMAUG00000019044) #16	Cblc (ENSMAUG00000020128) #17	Bcam (ENSMAUG00000017056) #18	Nectin2 (ENSMAUG00000009205) #19	Tomm40 (ENSMAUG00000008919) #20	Apoe (ENSMAUG00000015829) #21	Apoc1 (ENSMAUG00000020478) #22	Apoc4 (ENSMAUG00000019705) #23	Apoc2 (ENSMAUG00000014292) #24	Clptm1 (ENSMAUG00000004399) #25	ENSMAUG00000017092 #26	Clasrp (ENSMAUG00000000378) #27	Zfp296 (ENSMAUG00000019561) #28	Gemin7 (ENSMAUG00000018897) #29	Ppp1r37 (ENSMAUG00000008592) #30	Nkpd1 (ENSMAUG00000006604) #31	Trappc6a (ENSMAUG00000017280) #32	Bloc1s3 (ENSMAUG00000014366) #33	Exoc3l2 (ENSMAUG00000019204) #34	Mark4 (ENSMAUG00000009989) #35	ENSMAUG00000020514	Ckm (ENSMAUG00000009932) #36
Chinese hamster chok1gshd	MODERN SPECIES	328	Zfp94 (ENSCGRG00001012640)	Zfp61 (ENSCGRG00001013367)	ENSCGRG00001014904	ENSCGRG00001015424 #9	Zfp112 (ENSCGRG00001017579) #10	Zfp180 (ENSCGRG00001019378) #11	ENSCGRG00001017036 #13	Ceacam19 (ENSCGRG00001017389) ##12	Ceacam16 (ENSCGRG00001019208) #14	Bcl3 (ENSCGRG00001019375) #16	Cblc (ENSCGRG00001002264) #17	Bcam (ENSCGRG00001004345) #18	Nectin2 (ENSCGRG00001010482) #19	Tomm40 (ENSCGRG00001013429) #20	Apoe (ENSCGRG00001017152) #21	Apoc1 (ENSCGRG00001017299) #22	Apoc4 (ENSCGRG00001017401) #23	Apoc2 (ENSCGRG00001005778) #24	Clptm1 (ENSCGRG00001010928) #25	Relb (ENSCGRG00001007750) #26	Clasrp (ENSCGRG00001015861) #27	Zfp296 (ENSCGRG00001015680) #28	Gemin7 (ENSCGRG00001013306) #29	Ppp1r37 (ENSCGRG00001000178) #30	Nkpd1 (ENSCGRG00001019267) #31	Trappc6a (ENSCGRG00001002017) #32	Bloc1s3 (ENSCGRG00001015521) #33	ENSCGRG00001015530	Mark4 (ENSCGRG00001017090) #35	Ckm (ENSCGRG00001017465) #36	Klc3 (ENSCGRG00001022712) #37
Murinae	ANCESTRAL SPECIES	19	ENSGT00940000163265.f.a	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT00390000015308	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00800000125325 #15	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #36
Mus	ANCESTRAL SPECIES		ENSGT00940000163265.f.a	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT00390000015308	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00800000125325 #15	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #36
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT00940000163218.g	ENSGT01100000263479.E.h #12	ENSGT00390000015308	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00800000125325 #15	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #36
Ryukyu mouse	MODERN SPECIES	16	MGP_CAROLIEiJ_G0029319	Nlrp9b (MGP_CAROLIEiJ_G0029318)	Ceacam20 (MGP_CAROLIEiJ_G0029317) #12	MGP_CAROLIEiJ_G0029316	Igsf23 (MGP_CAROLIEiJ_G0029315)	Pvr (MGP_CAROLIEiJ_G0029314) #13	Ceacam19 (MGP_CAROLIEiJ_G0029313) ##12	Ceacam16 (MGP_CAROLIEiJ_G0029312) #14	MGP_CAROLIEiJ_G0029311 #15	Bcl3 (MGP_CAROLIEiJ_G0029310) #16	Cblc (MGP_CAROLIEiJ_G0029309) #17	Bcam (MGP_CAROLIEiJ_G0029308) #18	Nectin2 (MGP_CAROLIEiJ_G0029307) #19	Tomm40 (MGP_CAROLIEiJ_G0029306) #20	Apoe (MGP_CAROLIEiJ_G0029305) #21	Apoc1 (MGP_CAROLIEiJ_G0029304) #22	Apoc4 (MGP_CAROLIEiJ_G0029303) #23	Apoc2 (MGP_CAROLIEiJ_G0029302) #24	Clptm1 (MGP_CAROLIEiJ_G0029301) #25	Relb (MGP_CAROLIEiJ_G0029300) #26	Clasrp (MGP_CAROLIEiJ_G0029299) #27	Zfp296 (MGP_CAROLIEiJ_G0029298) #28	Gemin7 (MGP_CAROLIEiJ_G0029297) #29	Ppp1r37 (MGP_CAROLIEiJ_G0029296) #30	Nkpd1 (MGP_CAROLIEiJ_G0029295) #31	MGP_CAROLIEiJ_G0029294 #32	Bloc1s3 (MGP_CAROLIEiJ_G0029293) #33	Exoc3l2 (MGP_CAROLIEiJ_G0029292) #34	Mark4 (MGP_CAROLIEiJ_G0029291) #35	MGP_CAROLIEiJ_G0029290	Ckm (MGP_CAROLIEiJ_G0029289) #36
Mus_B	ANCESTRAL SPECIES		ENSGT01030000234553.b.b.c.a.a.a.b	ENSGT01030000234553.b.b.c.a.a.a.a.a.a.a.b	ENSGT00940000163218.g	ENSGT01100000263479.E.h #12	ENSGT00390000015308	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00800000125325 #15	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #36
Mouse	MODERN SPECIES	16	Vmn1r240 (ENSMUSG00000096152)	Vmn1r91 (ENSMUSG00000095201)	Nlrp9b (ENSMUSG00000060508)	Ceacam20 (ENSMUSG00000070777) #12	Igsf23 (ENSMUSG00000040498)	Pvr (ENSMUSG00000040511) #13	Ceacam19 (ENSMUSG00000049848) ##12	Ceacam16 (ENSMUSG00000014686) #14	Gm19345 (ENSMUSG00000092216) #15	Bcl3 (ENSMUSG00000053175) #16	Cblc (ENSMUSG00000040525) #17	Bcam (ENSMUSG00000002980) #18	Nectin2 (ENSMUSG00000062300) #19	Tomm40 (ENSMUSG00000002984) #20	Apoe (ENSMUSG00000002985) #21	Apoc1 (ENSMUSG00000040564) #22	Apoc4 (ENSMUSG00000074336) #23	Apoc2l (ENSMUSG00000109350)	Apoc2 (ENSMUSG00000002992) #24	Clptm1 (ENSMUSG00000002981) #25	Relb (ENSMUSG00000002983) #26	Clasrp (ENSMUSG00000061028) #27	Zfp296 (ENSMUSG00000011267) #28	Gemin7 (ENSMUSG00000044709) #29	Ppp1r37 (ENSMUSG00000051403) #30	Nkpd1 (ENSMUSG00000060621) #31	Trappc6a (ENSMUSG00000002043) #32	Bloc1s3 (ENSMUSG00000057667) #33	Exoc3l2 (ENSMUSG00000011263) #34	Mark4 (ENSMUSG00000030397) #35	Ckm (ENSMUSG00000030399) #36
Mus_C	ANCESTRAL SPECIES	15	ENSGT01030000234553.b.b.c.a.a.a.a.a.b.a	ENSGT01030000234553.b.b.c.a.a.a.a.a.b.b	ENSGT01030000234553.b.b.c.a.a.a.a.b	ENSGT01030000234553.b.b.c.a.a.a.b	ENSGT01030000234553.b.b.c.a.a.a.a.a.a.a.b	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00800000125325 #15	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT01030000234877	ENSGT00950000182772.A.a.a.b #36
spretus	MODERN SPECIES	16	MGP_SPRETEiJ_G0030403	MGP_SPRETEiJ_G0030402	MGP_SPRETEiJ_G0030401	Ceacam20 (MGP_SPRETEiJ_G0030400) #12	MGP_SPRETEiJ_G0030399	Pvr (MGP_SPRETEiJ_G0030398) #13	Ceacam19 (MGP_SPRETEiJ_G0030397) ##12	Ceacam16 (MGP_SPRETEiJ_G0030396) #14	MGP_SPRETEiJ_G0030395 #15	Bcl3 (MGP_SPRETEiJ_G0030394) #16	Cblc (MGP_SPRETEiJ_G0030393) #17	Bcam (MGP_SPRETEiJ_G0030392) #18	Nectin2 (MGP_SPRETEiJ_G0030391) #19	MGP_SPRETEiJ_G0030390 #20	Apoe (MGP_SPRETEiJ_G0030389) #21	Apoc1 (MGP_SPRETEiJ_G0030388) #22	Apoc4 (MGP_SPRETEiJ_G0030387) #23	Apoc2 (MGP_SPRETEiJ_G0030386) #24	Clptm1 (MGP_SPRETEiJ_G0030385) #25	Relb (MGP_SPRETEiJ_G0030384) #26	Clasrp (MGP_SPRETEiJ_G0030383) #27	Zfp296 (MGP_SPRETEiJ_G0030382) #28	Gemin7 (MGP_SPRETEiJ_G0030381) #29	Ppp1r37 (MGP_SPRETEiJ_G0030380) #30	Nkpd1 (MGP_SPRETEiJ_G0030379) #31	Trappc6a (MGP_SPRETEiJ_G0030378) #32	Bloc1s3 (MGP_SPRETEiJ_G0030377) #33	Exoc3l2 (MGP_SPRETEiJ_G0030376) #34	Mark4 (MGP_SPRETEiJ_G0030375) #35	MGP_SPRETEiJ_G0030374	Ckm (MGP_SPRETEiJ_G0030373) #36
Steppe mouse	MODERN SPECIES	2900		Nlrp9b (ENSMSIG00000007750)	Ceacam20 (ENSMSIG00000007720) #12	Igsf23 (ENSMSIG00000007703)	ENSMSIG00000007691	Pvr (ENSMSIG00000007677) #13	Ceacam19 (ENSMSIG00000007645) ##12	Ceacam16 (ENSMSIG00000007630) #14	Gm19345 (ENSMSIG00000007610) #15	Bcl3 (ENSMSIG00000007593) #16	Cblc (ENSMSIG00000007426) #17	Bcam (ENSMSIG00000007371) #18	Nectin2 (ENSMSIG00000007299) #19	Tomm40 (ENSMSIG00000007233) #20	Apoe (ENSMSIG00000007187) #21	Apoc1 (ENSMSIG00000007168) #22	Apoc4 (ENSMSIG00000007155) #23	Apoc2 (ENSMSIG00000007132) #24	Clptm1 (ENSMSIG00000007105) #25	Relb (ENSMSIG00000006878) #26	Clasrp (ENSMSIG00000006696) #27	Zfp296 (ENSMSIG00000006673) #28	Gemin7 (ENSMSIG00000006656) #29	Ppp1r37 (ENSMSIG00000006586) #30	Nkpd1 (ENSMSIG00000006532) #31	ENSMSIG00000006473 #32	Bloc1s3 (ENSMSIG00000006464) #33	Exoc3l2 (ENSMSIG00000006372) #34	Mark4 (ENSMSIG00000006221) #35	Ckm (ENSMSIG00000006180) #36	Klc3 (ENSMSIG00000006063) #37
Shrew mouse	MODERN SPECIES	10	MGP_PahariEiJ_G0021179	Zfp93 (MGP_PahariEiJ_G0021178)	Zfp108 (MGP_PahariEiJ_G0021177)	Zfp109 (MGP_PahariEiJ_G0021176)	Zfp111 (MGP_PahariEiJ_G0021175) #10	MGP_PahariEiJ_G0021174	Zfp235 (MGP_PahariEiJ_G0021173)	Zfp112 (MGP_PahariEiJ_G0021172) #10	Zfp180 (MGP_PahariEiJ_G0021171) #11	Bcl3 (MGP_PahariEiJ_G0021170) #16	Cblc (MGP_PahariEiJ_G0021169) #17	Bcam (MGP_PahariEiJ_G0021168) #18	Nectin2 (MGP_PahariEiJ_G0021167) #19	Tomm40 (MGP_PahariEiJ_G0021166) #20	Apoe (MGP_PahariEiJ_G0021165) #21	Apoc1 (MGP_PahariEiJ_G0021164) #22	Apoc4 (MGP_PahariEiJ_G0021163) #23	MGP_PahariEiJ_G0021162 #24	Clptm1 (MGP_PahariEiJ_G0021161) #25	Relb (MGP_PahariEiJ_G0021160) #26	Clasrp (MGP_PahariEiJ_G0021159) #27	Zfp296 (MGP_PahariEiJ_G0021158) #28	Gemin7 (MGP_PahariEiJ_G0021157) #29	Ppp1r37 (MGP_PahariEiJ_G0021156) #30	Nkpd1 (MGP_PahariEiJ_G0021155) #31	MGP_PahariEiJ_G0021154 #32	Bloc1s3 (MGP_PahariEiJ_G0021153) #33	Exoc3l2 (MGP_PahariEiJ_G0021152) #34	Mark4 (MGP_PahariEiJ_G0021151) #35	MGP_PahariEiJ_G0021150	Ckm (MGP_PahariEiJ_G0021149) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1616	Kcnn4 (ENSNGAG00000000241)	Lypd5 (ENSNGAG00000015499)	Zfp94 (ENSNGAG00000019166)	ENSNGAG00000001937	ENSNGAG00000010473 #9	Zfp112 (ENSNGAG00000015748) #10	Zfp180 (ENSNGAG00000015381) #11	ENSNGAG00000000107	Ceacam16 (ENSNGAG00000000737) #14	Bcl3 (ENSNGAG00000015405) #16	Cblc (ENSNGAG00000009613) #17	Bcam (ENSNGAG00000001125) #18	Nectin2 (ENSNGAG00000019227) #19	Tomm40 (ENSNGAG00000004065) #20	Apoe (ENSNGAG00000019153) #21	Apoc1 (ENSNGAG00000019714) #22	Apoc4 (ENSNGAG00000015603) #23	Apoc2 (ENSNGAG00000019759) #24	ENSNGAG00000000307	Clptm1 (ENSNGAG00000003363) #25	ENSNGAG00000012950 #26	Clasrp (ENSNGAG00000016249) #27	Zfp296 (ENSNGAG00000010996) #28	Gemin7 (ENSNGAG00000018443) #29	Ppp1r37 (ENSNGAG00000010843) #30	Nkpd1 (ENSNGAG00000015014) #31	Trappc6a (ENSNGAG00000018159) #32	Bloc1s3 (ENSNGAG00000013200) #33	Exoc3l2 (ENSNGAG00000020966) #34	Mark4 (ENSNGAG00000012653) #35	Ckm (ENSNGAG00000000066) #36
Lesser Egyptian jerboa	MODERN SPECIES	186	ENSJJAG00000023906	Smg9 (ENSJJAG00000023462)	Cadm4 (ENSJJAG00000022693)	Zfp428 (ENSJJAG00000022431)	Irgq (ENSJJAG00000022079)	Pinlyp (ENSJJAG00000021887)	Xrcc1 (ENSJJAG00000019927)	Ceacam19 (ENSJJAG00000018797) ##12	Ceacam16 (ENSJJAG00000018056) #14	Bcl3 (ENSJJAG00000017630) #16	Cblc (ENSJJAG00000017173) #17	Bcam (ENSJJAG00000016588) #18	Nectin2 (ENSJJAG00000015797) #19	Tomm40 (ENSJJAG00000015420) #20	Apoe (ENSJJAG00000014784) #21	Apoc1 (ENSJJAG00000017898) #22	Apoc4 (ENSJJAG00000017851) #23	Apoc2 (ENSJJAG00000017546) #24	Clptm1 (ENSJJAG00000017147) #25	Relb (ENSJJAG00000016298) #26	ENSJJAG00000016124 #27	Zfp296 (ENSJJAG00000015875) #28	Ppp1r37 (ENSJJAG00000015339) #30	ENSJJAG00000014876	Nkpd1 (ENSJJAG00000014468) #31	ENSJJAG00000014225	Fosb (ENSJJAG00000013651)	ENSJJAG00000013425	Polr1g (ENSJJAG00000013173)	Ppp1r13l (ENSJJAG00000011946)	Ercc2 (ENSJJAG00000006595)
Kangaroo rat	MODERN SPECIES	475	Xrcc1 (ENSDORG00000006108)	Pinlyp (ENSDORG00000006113)	Zfp428 (ENSDORG00000028524)	Cadm4 (ENSDORG00000001271)	Plaur (ENSDORG00000005373)	Smg9 (ENSDORG00000005079)	ENSDORG00000026077	Lypd5 (ENSDORG00000028923)	Ceacam19 (ENSDORG00000013639) ##12	Ceacam16 (ENSDORG00000008836) #14	Bcl3 (ENSDORG00000008643) #16	Bcam (ENSDORG00000003577) #18	Nectin2 (ENSDORG00000003578) #19	Tomm40 (ENSDORG00000003579) #20	Apoe (ENSDORG00000003581) #21	Apoc1 (ENSDORG00000003582) #22	Apoc4 (ENSDORG00000016144) #23	Apoc2 (ENSDORG00000027051) #24	Clptm1 (ENSDORG00000003446) #25	Relb (ENSDORG00000003448) #26	Gemin7 (ENSDORG00000027339) #29	Clasrp (ENSDORG00000003450) #27	Zfp296 (ENSDORG00000003451) #28	Ppp1r37 (ENSDORG00000003452) #30	Nkpd1 (ENSDORG00000027401) #31	Trappc6a (ENSDORG00000003457) #32	Exoc3l2 (ENSDORG00000009068) #34	Mark4 (ENSDORG00000013282) #35	ENSDORG00000023785	Ckm (ENSDORG00000013288) #36	Klc3 (ENSDORG00000008004) #37
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000162819	ENSGT00940000162402 #9	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT00390000015308	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT00940000163913	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT00950000182772.A.a.a.b #36
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT00940000162119	ENSGT00940000162819	ENSGT00940000162402 #9	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT00940000163913	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT00950000182772.A.a.a.b #36
Naked mole-rat female	MODERN SPECIES	21	ZNF226 (ENSHGLG00000003200)	ZNF227 (ENSHGLG00000003367)	ZNF235 (ENSHGLG00000003657) #9	ZNF112 (ENSHGLG00000003877) #10	ZNF180 (ENSHGLG00000003979) #11	CEACAM20 (ENSHGLG00000004190) #12	ENSHGLG00000032944 #13	CEACAM19 (ENSHGLG00000046771) ##12	CEACAM16 (ENSHGLG00000006899) #14	BCL3 (ENSHGLG00000007014) #16	CBLC (ENSHGLG00000008971) #17	BCAM (ENSHGLG00000003389) #18	NECTIN2 (ENSHGLG00000034437) #19	TOMM40 (ENSHGLG00000006959) #20	Apoe (ENSHGLG00000035249) #21	ENSHGLG00000038010 #22	APOC2 (ENSHGLG00000009840) #24	CLPTM1 (ENSHGLG00000013561) #25	RELB (ENSHGLG00000019359) #26	ENSHGLG00000048837	ENSHGLG00000019534 #27	ZNF296 (ENSHGLG00000003326) #28	ENSHGLG00000039471 #29	PPP1R37 (ENSHGLG00000004107) #30	ENSHGLG00000045368 #32	ENSHGLG00000002749 #33	ENSHGLG00000038913	ENSHGLG00000043179	ENSHGLG00000048961	GYS1 (ENSHGLG00000007154)	RUVBL2 (ENSHGLG00000004773)
Hystricomorpha_a	ANCESTRAL SPECIES	39	ENSGT00940000162545	ENSGT00940000162119	ENSGT00940000162819	ENSGT00940000162402 #9	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT00940000163913	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT00950000182772.A.a.a.b #36
Hystricomorpha_b	ANCESTRAL SPECIES	49	ENSGT00940000162545	ENSGT00940000162119	ENSGT00940000162819	ENSGT00940000162402 #9	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT00940000163913	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT00950000182772.A.a.a.b #36
Degu	MODERN SPECIES	238	ZNF227 (ENSODEG00000008802)	ENSODEG00000008591	ENSODEG00000010507 #9	ZNF235 (ENSODEG00000008851) #9	ZNF112 (ENSODEG00000009193) #10	ZNF180 (ENSODEG00000010071) #11	ENSODEG00000019539	CEACAM19 (ENSODEG00000008206) ##12	CEACAM16 (ENSODEG00000008673) #14	BCL3 (ENSODEG00000009380) #16	CBLC (ENSODEG00000008402) #17	BCAM (ENSODEG00000013187) #18	NECTIN2 (ENSODEG00000008200) #19	ENSODEG00000010615 #20	APOE (ENSODEG00000008747) #21	ENSODEG00000010383 #22	ENSODEG00000011088 #23	APOC2 (ENSODEG00000008478) #24	CLPTM1 (ENSODEG00000008066) #25	RELB (ENSODEG00000008207) #26	CLASRP (ENSODEG00000008407) #27	ZNF296 (ENSODEG00000008238) #28	GEMIN7 (ENSODEG00000009107) #29	PPP1R37 (ENSODEG00000008101) #30	NKPD1 (ENSODEG00000008357) #31	TRAPPC6A (ENSODEG00000008693) #32	EXOC3L2 (ENSODEG00000009155) #34	MARK4 (ENSODEG00000012545) #35	CKM (ENSODEG00000008279) #36	KLC3 (ENSODEG00000009706) #37	ERCC2 (ENSODEG00000008340)
Guinea pig	MODERN SPECIES	80	LYPD5 (ENSCPOG00000021326)	ZNF45 (ENSCPOG00000002985)	ZNF226 (ENSCPOG00000040740)	ZNF235 (ENSCPOG00000039731) #9	ZNF112 (ENSCPOG00000035016) #10	ZNF180 (ENSCPOG00000034649) #11	ENSCPOG00000006369 #13	ENSCPOG00000026521	CEACAM16 (ENSCPOG00000020065) #14	BCL3 (ENSCPOG00000015728) #16	CBLC (ENSCPOG00000001085) #17	BCAM (ENSCPOG00000013570) #18	NECTIN2 (ENSCPOG00000039888) #19	TOMM40 (ENSCPOG00000020146) #20	APOE (ENSCPOG00000007235) #21	APOC1 (ENSCPOG00000021989) #22	ENSCPOG00000009300 #23	APOC2 (ENSCPOG00000009302) #24	CLPTM1 (ENSCPOG00000010264) #25	RELB (ENSCPOG00000010273) #26	CLASRP (ENSCPOG00000010282) #27	ZNF296 (ENSCPOG00000010291) #28	GEMIN7 (ENSCPOG00000037844) #29	PPP1R37 (ENSCPOG00000006371) #30	NKPD1 (ENSCPOG00000026614) #31	TRAPPC6A (ENSCPOG00000015115) #32	BLOC1S3 (ENSCPOG00000035473) #33	ENSCPOG00000020516	ENSCPOG00000024355	EXOC3L2 (ENSCPOG00000021579) #34	MARK4 (ENSCPOG00000004117) #35
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000163265	ENSGT00940000162402 #9	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT00390000015308	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT00950000182772.A.a.a.b #36	ENSGT01030000234877
Marmotini	ANCESTRAL SPECIES	7	ENSGT00940000162402 #9	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT00960000192303	ENSGT00390000015308	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT00950000182772.A.a.a.b #36	ENSGT00940000162356 #37
Marmotini_b	ANCESTRAL SPECIES	49	ENSGT00940000163825	ENSGT00940000162402 #9	ENSGT00940000162215 #10	ENSGT00940000162315 #11	ENSGT01100000263479.E.h #12	ENSGT00960000192303	ENSGT00940000162848 #13	ENSGT01100000263479.B ##12	ENSGT01100000263479.C #14	ENSGT00940000161392 #16	ENSGT00940000162336 #17	ENSGT00940000161038 #18	ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00950000182929.B.b #21	ENSGT00390000011584 #22	ENSGT00390000015914 #23	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000160230 #26	ENSGT00940000153892.A #27	ENSGT00940000160667 #28	ENSGT00390000018039 #29	ENSGT00940000157454 #30	ENSGT00650000093443.x #31	ENSGT00390000012948.a #32	ENSGT00390000008756 #33	ENSGT01030000234613.b.b #34	ENSGT00940000159555 #35	ENSGT00950000182772.A.a.a.b #36	ENSGT00940000162356 #37
Arctic ground squirrel	MODERN SPECIES	297	ENSUPAG00010021863	ZNF235 (ENSUPAG00010021860) #9	ZNF112 (ENSUPAG00010021818) #10	ZNF180 (ENSUPAG00010021813) #11	CEACAM20 (ENSUPAG00010021809) #12	ENSUPAG00010021807	ENSUPAG00010021806 #13	ENSUPAG00010021805 ##12	CEACAM16 (ENSUPAG00010021804) #14	BCL3 (ENSUPAG00010021803) #16	CBLC (ENSUPAG00010021801) #17	BCAM (ENSUPAG00010021799) #18	NECTIN2 (ENSUPAG00010021794) #19	TOMM40 (ENSUPAG00010021791) #20	APOE (ENSUPAG00010021788) #21	APOC1 (ENSUPAG00010021785) #22	ENSUPAG00010021784 #23	ENSUPAG00010021782 #24	CLPTM1 (ENSUPAG00010021781) #25	RELB (ENSUPAG00010021774) #26	CLASRP (ENSUPAG00010021771) #27	ZNF296 (ENSUPAG00010021770) #28	GEMIN7 (ENSUPAG00010021768) #29	PPP1R37 (ENSUPAG00010021758) #30	NKPD1 (ENSUPAG00010021755) #31	TRAPPC6A (ENSUPAG00010021751) #32	BLOC1S3 (ENSUPAG00010021749) #33	EXOC3L2 (ENSUPAG00010021737) #34	MARK4 (ENSUPAG00010021726) #35	CKM (ENSUPAG00010021720) #36	KLC3 (ENSUPAG00010021708) #37
Alpin marmot	MODERN SPECIES	45	ZNF235 (ENSMMMG00000016063) #9	ZNF112 (ENSMMMG00000016057) #10	ZNF180 (ENSMMMG00000016049) #11	CEACAM20 (ENSMMMG00000016034) #12	ENSMMMG00000016029	ENSMMMG00000016028	ENSMMMG00000016025 #13	CEACAM19 (ENSMMMG00000015956) ##12	CEACAM16 (ENSMMMG00000015947) #14	BCL3 (ENSMMMG00000015919) #16	CBLC (ENSMMMG00000015894) #17	BCAM (ENSMMMG00000014804) #18	NECTIN2 (ENSMMMG00000014773) #19	TOMM40 (ENSMMMG00000014766) #20	ENSMMMG00000014754	APOC1 (ENSMMMG00000014747) #22	ENSMMMG00000014736 #24	CLPTM1 (ENSMMMG00000014731) #25	ENSMMMG00000014707 #26	CLASRP (ENSMMMG00000014675) #27	ZNF296 (ENSMMMG00000014656) #28	GEMIN7 (ENSMMMG00000014641) #29	PPP1R37 (ENSMMMG00000014623) #30	TRAPPC6A (ENSMMMG00000014570) #32	BLOC1S3 (ENSMMMG00000014569) #33	ENSMMMG00000014559	MARK4 (ENSMMMG00000014510) #35	CKM (ENSMMMG00000014494) #36	KLC3 (ENSMMMG00000014476) #37	ERCC2 (ENSMMMG00000014338)	ENSMMMG00000014331
Eurasian red squirrel	MODERN SPECIES	8	ENSSVLG00005017456	ZNF235 (ENSSVLG00005017480) #9	ZNF112 (ENSSVLG00005017552) #10	ZNF180 (ENSSVLG00005017606) #11	CEACAM20 (ENSSVLG00005017745) #12	ENSSVLG00005018458	ENSSVLG00005018540 #13	ENSSVLG00005018734 ##12	CEACAM16 (ENSSVLG00005019359) #14	BCL3 (ENSSVLG00005019448) #16	CBLC (ENSSVLG00005019554) #17	BCAM (ENSSVLG00005019699) #18	NECTIN2 (ENSSVLG00005019984) #19	TOMM40 (ENSSVLG00005020079) #20	APOE (ENSSVLG00005020139) #21	ENSSVLG00005020178 #22	ENSSVLG00005020271 #23	APOC2 (ENSSVLG00005020338) #24	CLPTM1 (ENSSVLG00005020445) #25	RELB (ENSSVLG00005020581) #26	CLASRP (ENSSVLG00005020689) #27	ZNF296 (ENSSVLG00005020812) #28	GEMIN7 (ENSSVLG00005020878) #29	PPP1R37 (ENSSVLG00005020898) #30	NKPD1 (ENSSVLG00005020950) #31	TRAPPC6A (ENSSVLG00005020976) #32	BLOC1S3 (ENSSVLG00005021043) #33	EXOC3L2 (ENSSVLG00005021070) #34	ENSSVLG00005021273 #35	CKM (ENSSVLG00005021360) #36	ENSSVLG00005021426
Lagomorpha	ANCESTRAL SPECIES	279													ENSGT00940000161167 #19	ENSGT00390000003308.a #20	ENSGT00940000173399	ENSGT00390000011584 #22	ENSGT00390000007913 #24	ENSGT00530000063461.B #25	ENSGT00940000153892.A #27	ENSGT00940000160667 #28
Rabbit	MODERN SPECIES	741												BCL3 (ENSOCUG00000026628) #16	CLPTM1 (ENSOCUG00000011714) #25	NECTIN2 (ENSOCUG00000017836) #19	TOMM40 (ENSOCUG00000023582) #20	APOC1 (ENSOCUG00000024530) #22	ENSOCUG00000020983 #24	ZNF296 (ENSOCUG00000026570) #28	CLASRP (ENSOCUG00000004711) #27	ENSOCUG00000034643
Pika	MODERN SPECIES	1025															ENSOPRG00000001749	ENSOPRG00000001762 #22