Mus_B	ANCESTRAL SPECIES	11	ENSGT00740000115687	ENSGT00940000159319	ENSGT00990000203619.B #8	ENSGT00940000158925 #9	ENSGT00950000183202.b #10	ENSGT01040000240444.A.a.a.a.a #11	ENSGT00950000183115.b.a #12	ENSGT00390000012063 #13	ENSGT00390000003338 #15	ENSGT00390000010170.a.b #16	ENSGT01050000244937.a.a #17	ENSGT00390000011864.db #18	ENSGT00940000159528 #19	ENSGT00940000160585 #20	ENSGT00710000106860 #21	ENSGT00950000183097.a.a.b #22	ENSGT00940000159160 #23	ENSGT00730000111163 #24	ENSGT00940000161772 #26	ENSGT00940000153137.a.b.b.a #27	ENSGT00940000153655.A.a	ENSGT00390000015682 #29	ENSGT00940000158961 #30	ENSGT00390000006051.a.b.b.c.b.c.a #31	ENSGT00390000016051 #32	ENSGT00940000159552 #33	ENSGT00390000012569.b #34	ENSGT00390000003758 #35	ENSGT00940000159144.B #36	ENSGT00940000162467.b #37	ENSGT00390000000693
Mus_C	ANCESTRAL SPECIES	20	ENSGT00740000115687	ENSGT00940000159319	ENSGT00990000203619.B #8	ENSGT00940000158925 #9	ENSGT00950000183202.b #10	ENSGT01040000240444.A.a.a.a.a #11	ENSGT00950000183115.b.a #12	ENSGT00390000012063 #13	ENSGT00390000003338 #15	ENSGT00390000010170.a.b #16	ENSGT01050000244937.a.a #17	ENSGT00390000011864.db #18	ENSGT00940000159528 #19	ENSGT00940000160585 #20	ENSGT00710000106860 #21	ENSGT00950000183097.a.a.b #22	ENSGT00940000159160 #23	ENSGT00730000111163 #24	ENSGT00940000161772 #26	ENSGT00940000153137.a.b.b.a #27	ENSGT00520000061084 #28	ENSGT00390000015682 #29	ENSGT00940000158961 #30	ENSGT00390000006051.a.b.b.c.b.c.a #31	ENSGT00390000016051 #32	ENSGT00940000159552 #33	ENSGT00390000012569.b #34	ENSGT00390000003758 #35	ENSGT00940000159144.B #36	ENSGT00940000162467.b #37	ENSGT00390000000693
spretus	MODERN SPECIES	5	MGP_SPRETEiJ_G0020390 #7	Cysltr2 (MGP_SPRETEiJ_G0020391) #8	Rcbtb2 (MGP_SPRETEiJ_G0020392) #9	Rb1 (MGP_SPRETEiJ_G0020393) #10	Lpar6 (MGP_SPRETEiJ_G0020394) #11	Itm2b (MGP_SPRETEiJ_G0020395) #12	Med4 (MGP_SPRETEiJ_G0020396) #13	MGP_SPRETEiJ_G0020397 #14	MGP_SPRETEiJ_G0020398 #15	Sucla2 (MGP_SPRETEiJ_G0020399) #16	Htr2a (MGP_SPRETEiJ_G0020400) #17	Esd (MGP_SPRETEiJ_G0020401) #18	Lrch1 (MGP_SPRETEiJ_G0020402) #19	Rubcnl (MGP_SPRETEiJ_G0020403) #20	Lrrc63 (MGP_SPRETEiJ_G0020404) #21	Lcp1 (MGP_SPRETEiJ_G0020405) #22	Cpb2 (MGP_SPRETEiJ_G0020406) #23	Zc3h13 (MGP_SPRETEiJ_G0020407) #24	MGP_SPRETEiJ_G0020408 #25	Siah3 (MGP_SPRETEiJ_G0020409) #26	Cby2 (MGP_SPRETEiJ_G0020410) #27	MGP_SPRETEiJ_G0020411 #28	Cog3 (MGP_SPRETEiJ_G0020412) #29	Slc25a30 (MGP_SPRETEiJ_G0020413) #30	Tpt1 (MGP_SPRETEiJ_G0020414) #31	Gtf2f2 (MGP_SPRETEiJ_G0020415) #32	Kctd4 (MGP_SPRETEiJ_G0020416) #33	Gpalpp1 (MGP_SPRETEiJ_G0020417) #34	Nufip1 (MGP_SPRETEiJ_G0020418) #35	Tsc22d1 (MGP_SPRETEiJ_G0020419) #36	Serp2 (MGP_SPRETEiJ_G0020420) #37
Steppe mouse	MODERN SPECIES	3340		ENSMSIG00000020528	Itm2b (ENSMSIG00000020537) #12	ENSMSIG00000020558	Med4 (ENSMSIG00000020566) #13	Nudt15 (ENSMSIG00000020586) #15	Sucla2 (ENSMSIG00000020594) #16	ENSMSIG00000020657	ENSMSIG00000020679	Htr2a (ENSMSIG00000020690) #17	Esd (ENSMSIG00000020709) #18	Lrch1 (ENSMSIG00000020905) #19	ENSMSIG00000021013	Rubcnl (ENSMSIG00000021027) #20	Lrrc63 (ENSMSIG00000021056) #21	Lcp1 (ENSMSIG00000021079) #22	Cpb2 (ENSMSIG00000021306) #23	Zc3h13 (ENSMSIG00000021317) #24	Siah3 (ENSMSIG00000021424) #26	Cby2 (ENSMSIG00000021441) #27	ENSMSIG00000021463 #28	Cog3 (ENSMSIG00000021489) #29	ENSMSIG00000021594 #30	ENSMSIG00000021620 ##31	Gtf2f2 (ENSMSIG00000021660) #32	ENSMSIG00000021679	Kctd4 (ENSMSIG00000021688) #33	Gpalpp1 (ENSMSIG00000021703) #34	Nufip1 (ENSMSIG00000021714) #35	Tsc22d1 (ENSMSIG00000021724) #36	ENSMSIG00000021792 #37
Mouse	MODERN SPECIES	5	Gm9195 (ENSMUSG00000109446)	Fndc3a (ENSMUSG00000033487)	Cysltr2 (ENSMUSG00000033470) #8	Rcbtb2 (ENSMUSG00000022106) #9	Rb1 (ENSMUSG00000022105) #10	Lpar6 (ENSMUSG00000033446) #11	Itm2b (ENSMUSG00000022108) #12	Med4 (ENSMUSG00000022109) #13	Nudt15 (ENSMUSG00000033405) #15	Sucla2 (ENSMUSG00000022110) #16	Htr2a (ENSMUSG00000034997) #17	Esd (ENSMUSG00000021996) #18	Lrch1 (ENSMUSG00000068015) #19	Rubcnl (ENSMUSG00000034959) #20	Lrrc63 (ENSMUSG00000021997) #21	Lcp1 (ENSMUSG00000021998) #22	Cpb2 (ENSMUSG00000021999) #23	Zc3h13 (ENSMUSG00000022000) #24	Siah3 (ENSMUSG00000091722) #26	Cby2 (ENSMUSG00000034913) #27	Erich6b (ENSMUSG00000022002)	Cog3 (ENSMUSG00000034893) #29	Slc25a30 (ENSMUSG00000022003) #30	Tpt1 (ENSMUSG00000060126) #31	Gtf2f2 (ENSMUSG00000067995) #32	Kctd4 (ENSMUSG00000046523) #33	Gpalpp1 (ENSMUSG00000022008) #34	Nufip1 (ENSMUSG00000022009) #35	Tsc22d1 (ENSMUSG00000022010) #36	Serp2 (ENSMUSG00000052584) #37	Lacc1 (ENSMUSG00000044350)