Tetrapoda ANCESTRAL SPECIES ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT01040000240539 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT01030000235083 ENSGT00940000165996 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 Amniota ANCESTRAL SPECIES ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT01040000240539 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 Mammalia ANCESTRAL SPECIES ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173288 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 Theria ANCESTRAL SPECIES 1 ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173288 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 Eutheria ANCESTRAL SPECIES 17 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 Boreoeutheria ANCESTRAL SPECIES 21 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Euarchontoglires ANCESTRAL SPECIES 21 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00390000015396 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 Primates ANCESTRAL SPECIES 26 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00390000015396 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 Haplorrhini ANCESTRAL SPECIES 28 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00390000015396 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 Simiiformes ANCESTRAL SPECIES 22 ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00860000135722 ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b.c ENSGT00940000161696.c.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00390000015396 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 Platyrrhini ANCESTRAL SPECIES 23 ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00860000135722 ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338.m ENSGT00390000010170.a.b.c.e ENSGT00940000161696.c.b ENSGT01050000244937.a.a ENSGT00390000011864.m.a ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b.p #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000014262 #36 Cebidae ANCESTRAL SPECIES 26 ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00860000135722 ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338.m ENSGT00390000010170.a.b.c.e ENSGT00940000161696.c.b ENSGT01050000244937.a.a ENSGT00390000011864.m.a ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b.p #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 Cebidae_a ANCESTRAL SPECIES 28 ENSGT00910000146906 ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00860000135722 ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338.m ENSGT00390000010170.a.b.c.e ENSGT00940000161696.c.b ENSGT01050000244937.a.a ENSGT00390000011864.m.a ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b.p #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000014262 #36 Bolivian squirrel monkey MODERN SPECIES 106 RUBCNL (ENSSBOG00000035933) #19 ENSSBOG00000031866 #20 LRRC63 (ENSSBOG00000035757) #21 LCP1 (ENSSBOG00000022400) #22 CPB2 (ENSSBOG00000018312) #23 ZC3H13 (ENSSBOG00000027228) #24 SIAH3 (ENSSBOG00000027355) #25 CBY2 (ENSSBOG00000014137) #26 COG3 (ENSSBOG00000004105) #27 SLC25A30 (ENSSBOG00000018296) #28 ENSSBOG00000031728 #29 GTF2F2 (ENSSBOG00000019875) #30 KCTD4 (ENSSBOG00000019746) #31 ENSSBOG00000021983 #32 NUFIP1 (ENSSBOG00000028111) #33 TSC22D1 (ENSSBOG00000021407) #34 SERP2 (ENSSBOG00000023986) #35 SMIM2 (ENSSBOG00000025045) #36 LACC1 (ENSSBOG00000032664) #37 Capuchin MODERN SPECIES 94 MLNR (ENSCCAG00000012939) FNDC3A (ENSCCAG00000022083) RCBTB2 (ENSCCAG00000029598) RB1 (ENSCCAG00000019226) LPAR6 (ENSCCAG00000014413) ITM2B (ENSCCAG00000025031) MED4 (ENSCCAG00000037625) NUDT15 (ENSCCAG00000034630) SUCLA2 (ENSCCAG00000036078) ENSCCAG00000027774 HTR2A (ENSCCAG00000020537) ENSCCAG00000025918 LRCH1 (ENSCCAG00000036225) RUBCNL (ENSCCAG00000023570) #19 LRRC63 (ENSCCAG00000024800) #21 LCP1 (ENSCCAG00000023585) #22 CPB2 (ENSCCAG00000030272) #23 ZC3H13 (ENSCCAG00000032728) #24 SIAH3 (ENSCCAG00000036195) #25 CBY2 (ENSCCAG00000002811) #26 ERICH6B (ENSCCAG00000028308) COG3 (ENSCCAG00000037860) #27 SLC25A30 (ENSCCAG00000037550) #28 ENSCCAG00000036324 #29 GTF2F2 (ENSCCAG00000020798) #30 KCTD4 (ENSCCAG00000003060) #31 GPALPP1 (ENSCCAG00000035973) NUFIP1 (ENSCCAG00000025311) #33 TSC22D1 (ENSCCAG00000026065) #34 SERP2 (ENSCCAG00000037728) #35 SMIM2 (ENSCCAG00000034428) #36 Marmoset MODERN SPECIES 17 LRRC63 (ENSCJAG00000016849) #21 LCP1 (ENSCJAG00000016813) #22 CPB2 (ENSCJAG00000016797) #23 ZC3H13 (ENSCJAG00000016756) #24 SIAH3 (ENSCJAG00000023214) #25 CBY2 (ENSCJAG00000042308) #26 ERICH6B (ENSCJAG00000073347) COG3 (ENSCJAG00000019251) #27 SLC25A30 (ENSCJAG00000043939) #28 ENSCJAG00000080500 ENSCJAG00000019229 ##29 KCTD4 (ENSCJAG00000056150) #31 GTF2F2 (ENSCJAG00000019220) #30 GPALPP1 (ENSCJAG00000019204) NUFIP1 (ENSCJAG00000019195) #33 ENSCJAG00000070699 ENSCJAG00000072132 Mas night monkey MODERN SPECIES 902 LPAR6 (ENSANAG00000016578) ENSANAG00000011241 ITM2B (ENSANAG00000029180) ENSANAG00000026714 ENSANAG00000027167 NUDT15 (ENSANAG00000023666) ENSANAG00000025311 ENSANAG00000028654 ENSANAG00000029501 HTR2A (ENSANAG00000032310) ENSANAG00000033549 LRCH1 (ENSANAG00000032605) ENSANAG00000021038 RUBCNL (ENSANAG00000025520) #19 LRRC63 (ENSANAG00000029208) #21 LCP1 (ENSANAG00000028550) #22 CPB2 (ENSANAG00000024089) #23 ZC3H13 (ENSANAG00000033079) #24 SIAH3 (ENSANAG00000027513) #25 CBY2 (ENSANAG00000028568) #26 ERICH6B (ENSANAG00000022961) COG3 (ENSANAG00000023990) #27 SLC25A30 (ENSANAG00000027572) #28 ENSANAG00000031206 ENSANAG00000023331 ENSANAG00000011705 ENSANAG00000037538 #29 GTF2F2 (ENSANAG00000029406) #30 KCTD4 (ENSANAG00000018346) #31 ENSANAG00000023959 #32 NUFIP1 (ENSANAG00000019736) #33 Catarrhini ANCESTRAL SPECIES 21 ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00390000010218.f.a.b.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b.c ENSGT00940000161696.c.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00450000040303.d ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00390000015396 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00390000003628.b.c.b.a.a.a ENSGT00940000159144.B #34 Hominoidea ANCESTRAL SPECIES 21 ENSGT00910000146906 ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00390000010218.f.a.b.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b.c ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00450000040303.d ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00940000159552 #31 ENSGT00390000016051 #30 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00390000003628.b.c.b.a.a.a.c ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 Hominidae ANCESTRAL SPECIES 23 ENSGT01100000263536.B.c.a ENSGT00910000146906 ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00390000010218.f.a.b.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b.c ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00940000159552 #31 ENSGT00390000016051 #30 ENSGT00940000163575 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00390000003628.b.c.b.a.a.a.c ENSGT00940000159144.B #34 Homo/Pan/Gorilla group ANCESTRAL SPECIES 23 ENSGT00910000146906 ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00390000010218.f.a.b.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b.c.c ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00410000028359 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00940000159552 #31 ENSGT00390000016051 #30 ENSGT00940000163575 ENSGT00390000003758.c #33 ENSGT00390000003628.b.c.b.a.a.a.c ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 Gorilla MODERN SPECIES 4 LPAR6 (ENSGGOG00000015398) ENSGGOG00000025744 RB1 (ENSGGOG00000016440) ITM2B (ENSGGOG00000006744) MED4 (ENSGGOG00000014132) NUDT15 (ENSGGOG00000008232) SUCLA2 (ENSGGOG00000008224) ENSGGOG00000040252 HTR2A (ENSGGOG00000038568) ESD (ENSGGOG00000041798) LRCH1 (ENSGGOG00000006833) ENSGGOG00000040281 RUBCNL (ENSGGOG00000010430) #19 ENSGGOG00000042457 LRRC63 (ENSGGOG00000004589) #21 LCP1 (ENSGGOG00000015581) #22 CPB2 (ENSGGOG00000002007) #23 ZC3H13 (ENSGGOG00000005496) #24 SIAH3 (ENSGGOG00000001856) #25 CBY2 (ENSGGOG00000010156) #26 ERICH6B (ENSGGOG00000006343) COG3 (ENSGGOG00000006014) #27 SLC25A30 (ENSGGOG00000012295) #28 TPT1 (ENSGGOG00000001684) #29 KCTD4 (ENSGGOG00000038712) #31 GTF2F2 (ENSGGOG00000006657) #30 GPALPP1 (ENSGGOG00000027345) NUFIP1 (ENSGGOG00000000356) #33 ENSGGOG00000038865 TSC22D1 (ENSGGOG00000012857) #34 SERP2 (ENSGGOG00000044163) #35 Homo/Pan group ANCESTRAL SPECIES 22 ENSGT00910000146906 ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00390000010218.f.a.b.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b.c.c ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00410000028359 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00940000159552 #31 ENSGT00390000016051 #30 ENSGT00940000163575 ENSGT00390000003758.c #33 ENSGT00390000003628.b.c.b.a.a.a.c ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 Human MODERN SPECIES 4 MLNR (ENSG00000102539) FNDC3A (ENSG00000102531) CYSLTR2 (ENSG00000152207) RCBTB2 (ENSG00000136161) LPAR6 (ENSG00000139679) RB1 (ENSG00000139687) ITM2B (ENSG00000136156) MED4 (ENSG00000136146) NUDT15 (ENSG00000136159) SUCLA2 (ENSG00000136143) HTR2A (ENSG00000102468) ESD (ENSG00000139684) LRCH1 (ENSG00000136141) RUBCNL (ENSG00000102445) #19 LRRC63 (ENSG00000173988) #21 LCP1 (ENSG00000136167) #22 CPB2 (ENSG00000080618) #23 ZC3H13 (ENSG00000123200) #24 SIAH3 (ENSG00000215475) #25 CBY2 (ENSG00000174015) #26 ERICH6B (ENSG00000165837) COG3 (ENSG00000136152) #27 SLC25A30 (ENSG00000174032) #28 TPT1 (ENSG00000133112) #29 KCTD4 (ENSG00000180332) #31 GTF2F2 (ENSG00000188342) #30 GPALPP1 (ENSG00000133114) NUFIP1 (ENSG00000083635) #33 TSC22D1 (ENSG00000102804) #34 SERP2 (ENSG00000151778) #35 SMIM2 (ENSG00000139656) #36 Pan ANCESTRAL SPECIES 22 ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b.c.c ENSGT00940000154415.x.b ENSGT00940000161696.c.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00910000146855.i.b ENSGT00390000004757.`b.b.a.b ENSGT00940000160585 #19 ENSGT00410000028359 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00410000028070.c ENSGT00940000159552 #31 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051 #30 ENSGT00940000163575 ENSGT00390000012569.b #32 ENSGT00390000003758.c #33 ENSGT00390000003628.b.c.b.a.a.a.c Chimpanzee MODERN SPECIES 4 ITM2B (ENSPTRG00000005863) MED4 (ENSPTRG00000005861) ENSPTRG00000042329 SUCLA2 (ENSPTRG00000005859) ENSPTRG00000040949 ENSPTRG00000044084 HTR2A (ENSPTRG00000005858) ESD (ENSPTRG00000005857) LRCH1 (ENSPTRG00000005856) ENSPTRG00000052632 ENSPTRG00000046675 ENSPTRG00000046351 RUBCNL (ENSPTRG00000005855) #19 ENSPTRG00000049827 LRRC63 (ENSPTRG00000005854) #21 LCP1 (ENSPTRG00000005853) #22 CPB2 (ENSPTRG00000005852) #23 ZC3H13 (ENSPTRG00000005851) #24 SIAH3 (ENSPTRG00000047082) #25 CBY2 (ENSPTRG00000051708) #26 ERICH6B (ENSPTRG00000005848) COG3 (ENSPTRG00000005847) #27 SLC25A30 (ENSPTRG00000005845) #28 ENSPTRG00000044135 TPT1 (ENSPTRG00000042843) #29 KCTD4 (ENSPTRG00000047173) #31 GTF2F2 (ENSPTRG00000005840) #30 GPALPP1 (ENSPTRG00000024388) NUFIP1 (ENSPTRG00000005838) #33 ENSPTRG00000048209 TSC22D1 (ENSPTRG00000005837) #34 Bonobo MODERN SPECIES 249 RUBCNL (ENSPPAG00000028887) #19 ENSPPAG00000031290 LRRC63 (ENSPPAG00000031676) #21 LCP1 (ENSPPAG00000032402) #22 CPB2 (ENSPPAG00000034119) #23 ZC3H13 (ENSPPAG00000034465) #24 SIAH3 (ENSPPAG00000030912) #25 CBY2 (ENSPPAG00000030990) #26 ERICH6B (ENSPPAG00000031230) COG3 (ENSPPAG00000033597) #27 SLC25A30 (ENSPPAG00000004053) #28 ENSPPAG00000016372 Orangutan MODERN SPECIES 4 ENSPPYG00000037999 FNDC3A (ENSPPYG00000005363) CYSLTR2 (ENSPPYG00000005362) RCBTB2 (ENSPPYG00000005361) RB1 (ENSPPYG00000005357) ITM2B (ENSPPYG00000005356) NUDT15 (ENSPPYG00000005353) MED4 (ENSPPYG00000005354) SUCLA2 (ENSPPYG00000005352) HTR2A (ENSPPYG00000005351) ESD (ENSPPYG00000029594) LRCH1 (ENSPPYG00000005349) ENSPPYG00000035548 RUBCNL (ENSPPYG00000005348) #19 LRRC63 (ENSPPYG00000005347) #21 LCP1 (ENSPPYG00000005346) #22 CPB2 (ENSPPYG00000005345) #23 ZC3H13 (ENSPPYG00000005344) #24 SIAH3 (ENSPPYG00000040754) #25 CBY2 (ENSPPYG00000005342) #26 ERICH6B (ENSPPYG00000005341) COG3 (ENSPPYG00000005340) #27 SLC25A30 (ENSPPYG00000005339) #28 ENSPPYG00000005335 #29 KCTD4 (ENSPPYG00000005334) #31 GTF2F2 (ENSPPYG00000005333) #30 GPALPP1 (ENSPPYG00000005332) #32 NUFIP1 (ENSPPYG00000005331) #33 TSC22D1 (ENSPPYG00000005330) #34 SERP2 (ENSPPYG00000014205) #35 SMIM2 (ENSPPYG00000005328) #36 Gibbon MODERN SPECIES 20 RCBTB2 (ENSNLEG00000003314) LPAR6 (ENSNLEG00000032872) ENSNLEG00000029413 RB1 (ENSNLEG00000003150) ITM2B (ENSNLEG00000032591) MED4 (ENSNLEG00000002961) NUDT15 (ENSNLEG00000031040) SUCLA2 (ENSNLEG00000002948) ENSNLEG00000034996 HTR2A (ENSNLEG00000002930) ESD (ENSNLEG00000002862) LRCH1 (ENSNLEG00000002812) RUBCNL (ENSNLEG00000002722) #19 ENSNLEG00000027697 LRRC63 (ENSNLEG00000002719) #21 LCP1 (ENSNLEG00000002616) #22 CPB2 (ENSNLEG00000002561) #23 ZC3H13 (ENSNLEG00000002498) #24 SIAH3 (ENSNLEG00000002491) #25 CBY2 (ENSNLEG00000002469) #26 ERICH6B (ENSNLEG00000002437) COG3 (ENSNLEG00000002232) #27 TPT1 (ENSNLEG00000002108) #29 KCTD4 (ENSNLEG00000028562) #31 GTF2F2 (ENSNLEG00000002097) #30 GPALPP1 (ENSNLEG00000030453) NUFIP1 (ENSNLEG00000002021) #33 TSC22D1 (ENSNLEG00000001960) #34 SERP2 (ENSNLEG00000029213) #35 SMIM2 (ENSNLEG00000018205) #36 LACC1 (ENSNLEG00000001935) #37 Cercopithecidae ANCESTRAL SPECIES 23 ENSGT00910000146906 ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338.i.b ENSGT00390000010170.a.b.c.a ENSGT00940000161696.c.b ENSGT01050000244937.a.a ENSGT00390000011864.o.a ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00450000040303.d ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00910000147882 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00390000015396 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b.n #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00390000003628.b.c.b.a.a.a Cercopithecinae ANCESTRAL SPECIES 20 ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00390000010218.f.a.b.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338.i.b ENSGT00390000010170.a.b.c.a ENSGT00940000161696.c.b ENSGT01050000244937.a.a ENSGT00390000011864.o.a ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00450000040303.d ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00910000147882 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00390000015396 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b.n #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00390000003628.b.c.b.a.a.a Vervet Monkey MODERN SPECIES 22 MLNR (ENSCSAG00000017724) FNDC3A (ENSCSAG00000017734) CYSLTR2 (ENSCSAG00000018610) RCBTB2 (ENSCSAG00000017736) LPAR6 (ENSCSAG00000018609) RB1 (ENSCSAG00000017738) ITM2B (ENSCSAG00000017740) MED4 (ENSCSAG00000017743) NUDT15 (ENSCSAG00000017745) SUCLA2 (ENSCSAG00000017747) HTR2A (ENSCSAG00000017748) ESD (ENSCSAG00000017750) LRCH1 (ENSCSAG00000017752) RUBCNL (ENSCSAG00000017755) #19 LRRC63 (ENSCSAG00000017757) #21 LCP1 (ENSCSAG00000017761) #22 CPB2 (ENSCSAG00000017762) #23 ZC3H13 (ENSCSAG00000017764) #24 SIAH3 (ENSCSAG00000017765) #25 CBY2 (ENSCSAG00000017766) #26 ERICH6B (ENSCSAG00000017768) COG3 (ENSCSAG00000017769) #27 SLC25A30 (ENSCSAG00000017770) #28 TPT1 (ENSCSAG00000017773) #29 KCTD4 (ENSCSAG00000018607) #31 GTF2F2 (ENSCSAG00000017777) #30 ENSCSAG00000017778 #32 NUFIP1 (ENSCSAG00000017779) #33 TSC22D1 (ENSCSAG00000017781) #34 SERP2 (ENSCSAG00000017782) #35 ENSCSAG00000017783 #36 Cercopithecinae_a ANCESTRAL SPECIES 19 ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00390000010218.f.a.b.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338.i.b ENSGT00390000010170.a.b.c.a ENSGT00940000161696.c.b ENSGT01050000244937.a.a ENSGT00390000011864.o.a ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00450000040303.d ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00910000147882 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00390000015396 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b.n #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00390000003628.b.c.b.a.a.a Macaca ANCESTRAL SPECIES 19 ENSGT00910000146906 ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00390000010218.f.a.b.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338.i.b ENSGT00390000010170.a.b.c.a ENSGT01050000244937.a.a ENSGT00390000011864.p ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00450000040303.d ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00910000147882 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b.n #29 ENSGT00940000159552 #31 ENSGT00390000006051.a.b.a.b.m.a #29 ENSGT00390000016051 #30 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 Macaca_a ANCESTRAL SPECIES 19 ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00910000146906 ENSGT00940000158925 ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338.i.b ENSGT00390000010170.a.b.c.a ENSGT01050000244937.a.a ENSGT00390000011864.p ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00450000040303.d ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b.m.b #29 ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.a.a.b.b.b.a.a ENSGT00940000159552 #31 ENSGT00390000016051 #30 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000014262 #36 Crab-eating macaque MODERN SPECIES 8 ENSMFAG00000059363 RCBTB2 (ENSMFAG00000042366) ENSMFAG00000064054 ENSMFAG00000059645 RB1 (ENSMFAG00000004544) ITM2B (ENSMFAG00000036817) MED4 (ENSMFAG00000036744) NUDT15 (ENSMFAG00000042118) SUCLA2 (ENSMFAG00000043471) HTR2A (ENSMFAG00000060544) ESD (ENSMFAG00000035557) LRCH1 (ENSMFAG00000032767) RUBCNL (ENSMFAG00000030648) #19 ENSMFAG00000037947 LRRC63 (ENSMFAG00000033245) #21 LCP1 (ENSMFAG00000036326) #22 ENSMFAG00000040145 ENSMFAG00000004060 SIAH3 (ENSMFAG00000000091) #25 ENSMFAG00000055119 CBY2 (ENSMFAG00000039854) #26 ENSMFAG00000031871 ERICH6B (ENSMFAG00000044485) COG3 (ENSMFAG00000033101) #27 SLC25A30 (ENSMFAG00000035809) #28 ENSMFAG00000048937 TPT1 (ENSMFAG00000031958) #29 KCTD4 (ENSMFAG00000038976) #31 GTF2F2 (ENSMFAG00000015620) #30 GPALPP1 (ENSMFAG00000033152) NUFIP1 (ENSMFAG00000033059) #33 Rhesus MODERN SPECIES 8 CYSLTR2 (ENSMMUG00000063377) RCBTB2 (ENSMMUG00000017688) RB1 (ENSMMUG00000007891) ITM2B (ENSMMUG00000007888) MED4 (ENSMMUG00000017988) NUDT15 (ENSMMUG00000056464) SUCLA2 (ENSMMUG00000007539) ENSMMUG00000059778 ENSMMUG00000065094 HTR2A (ENSMMUG00000004210) ESD (ENSMMUG00000004209) LRCH1 (ENSMMUG00000016293) RUBCNL (ENSMMUG00000009862) #19 ENSMMUG00000060668 LRRC63 (ENSMMUG00000009860) #21 LCP1 (ENSMMUG00000017033) #22 ZC3H13 (ENSMMUG00000017025) #24 SIAH3 (ENSMMUG00000041756) #25 CBY2 (ENSMMUG00000011986) #26 ERICH6B (ENSMMUG00000044896) COG3 (ENSMMUG00000018409) #27 SLC25A30 (ENSMMUG00000037790) #28 TPT1 (ENSMMUG00000022979) #29 ENSMMUG00000049780 KCTD4 (ENSMMUG00000012636) #31 GTF2F2 (ENSMMUG00000062575) #30 ENSMMUG00000054319 GPALPP1 (ENSMMUG00000016612) NUFIP1 (ENSMMUG00000016609) #33 ENSMMUG00000060716 TSC22D1 (ENSMMUG00000003753) #34 Pig-tailed macaque MODERN SPECIES 171 ENSMNEG00000012494 RCBTB2 (ENSMNEG00000045246) LPAR6 (ENSMNEG00000000292) ENSMNEG00000034410 RB1 (ENSMNEG00000030265) ITM2B (ENSMNEG00000036643) MED4 (ENSMNEG00000040390) ENSMNEG00000041226 ENSMNEG00000006210 HTR2A (ENSMNEG00000020560) ENSMNEG00000034915 LRCH1 (ENSMNEG00000041283) RUBCNL (ENSMNEG00000043317) #19 ENSMNEG00000043141 LRRC63 (ENSMNEG00000031014) #21 LCP1 (ENSMNEG00000042226) #22 ENSMNEG00000004142 CPB2 (ENSMNEG00000044555) #23 ZC3H13 (ENSMNEG00000044356) #24 SIAH3 (ENSMNEG00000031264) #25 CBY2 (ENSMNEG00000038999) #26 ENSMNEG00000036505 ERICH6B (ENSMNEG00000036543) COG3 (ENSMNEG00000028539) #27 SLC25A30 (ENSMNEG00000035737) #28 Cercopithecinae_b ANCESTRAL SPECIES 28 ENSGT00910000146906 ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338.i.b ENSGT00390000010170.a.b.c.a ENSGT00940000161696.c.b ENSGT01050000244937.a.a ENSGT00390000011864.o.a ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00450000040303.d ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00910000147882 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00390000015396 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b.n #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00390000003628.b.c.b.a.a.a Olive baboon MODERN SPECIES 6 CYSLTR2 (ENSPANG00000010610) RCBTB2 (ENSPANG00000017177) LPAR6 (ENSPANG00000010821) RB1 (ENSPANG00000007572) ITM2B (ENSPANG00000010611) ENSPANG00000050365 MED4 (ENSPANG00000017223) NUDT15 (ENSPANG00000018183) SUCLA2 (ENSPANG00000002938) ENSPANG00000050620 HTR2A (ENSPANG00000022427) ENSPANG00000010192 LRCH1 (ENSPANG00000006286) RUBCNL (ENSPANG00000012223) #19 LRRC63 (ENSPANG00000012865) #21 LCP1 (ENSPANG00000008557) #22 CPB2 (ENSPANG00000009473) #23 ZC3H13 (ENSPANG00000014127) #24 SIAH3 (ENSPANG00000012225) #25 CBY2 (ENSPANG00000017956) #26 ERICH6B (ENSPANG00000017954) COG3 (ENSPANG00000012226) #27 ENSPANG00000047840 SLC25A30 (ENSPANG00000018184) #28 TPT1 (ENSPANG00000005716) #29 KCTD4 (ENSPANG00000004546) #31 GTF2F2 (ENSPANG00000023048) #30 ENSPANG00000048298 #32 NUFIP1 (ENSPANG00000014890) #33 TSC22D1 (ENSPANG00000039281) #34 ENSPANG00000036191 #35 Cercopithecinae_d ANCESTRAL SPECIES 54 ENSGT00910000146906 ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338.i.b ENSGT00390000010170.a.b.c.a ENSGT00940000161696.c.b ENSGT01050000244937.a.a ENSGT00390000011864.o.a ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00450000040303.d ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00910000147882 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b.n #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00390000003628.b.c.b.a.a.a ENSGT00940000159144.B #34 Drill MODERN SPECIES 465 RUBCNL (ENSMLEG00000034953) #19 LRRC63 (ENSMLEG00000042168) #21 ENSMLEG00000028978 LCP1 (ENSMLEG00000037198) #22 CPB2 (ENSMLEG00000000402) #23 ENSMLEG00000024159 ZC3H13 (ENSMLEG00000039387) #24 SIAH3 (ENSMLEG00000038769) #25 CBY2 (ENSMLEG00000031233) #26 ERICH6B (ENSMLEG00000005620) COG3 (ENSMLEG00000020702) #27 ENSMLEG00000020975 SLC25A30 (ENSMLEG00000028851) #28 ENSMLEG00000011456 #29 GTF2F2 (ENSMLEG00000014777) #30 KCTD4 (ENSMLEG00000023023) #31 ENSMLEG00000038702 #32 NUFIP1 (ENSMLEG00000027383) #33 ENSMLEG00000031148 Sooty mangabey MODERN SPECIES 125 RCBTB2 (ENSCATG00000033627) ENSCATG00000006797 RB1 (ENSCATG00000018582) LPAR6 (ENSCATG00000014982) ITM2B (ENSCATG00000030426) MED4 (ENSCATG00000040995) ENSCATG00000009200 ENSCATG00000040280 ENSCATG00000044105 HTR2A (ENSCATG00000037177) ENSCATG00000040583 LRCH1 (ENSCATG00000018159) RUBCNL (ENSCATG00000033291) #19 LRRC63 (ENSCATG00000039942) #21 ENSCATG00000040154 LCP1 (ENSCATG00000040724) #22 CPB2 (ENSCATG00000042292) #23 ENSCATG00000007236 ZC3H13 (ENSCATG00000041075) #24 SIAH3 (ENSCATG00000033729) #25 CBY2 (ENSCATG00000034428) #26 ERICH6B (ENSCATG00000039491) COG3 (ENSCATG00000044753) #27 SLC25A30 (ENSCATG00000035355) #28 TPT1 (ENSCATG00000031478) #29 GTF2F2 (ENSCATG00000039711) #30 KCTD4 (ENSCATG00000012765) #31 ENSCATG00000034187 #32 NUFIP1 (ENSCATG00000002411) #33 TSC22D1 (ENSCATG00000015087) #34 SERP2 (ENSCATG00000045178) #35 Rhinopithecus ANCESTRAL SPECIES 156 ENSGT01050000244937.a.a ENSGT00390000011864.o.a ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00450000040303.d ENSGT00950000183097.a.a.b #22 ENSGT00910000147882 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b.m.a #29 ENSGT00390000006051.a.b.a.b.n #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00390000003628.b.c.b.a.a.a Black snub-nosed monkey MODERN SPECIES 357 LRRC63 (ENSRBIG00000028445) #21 ENSRBIG00000038896 LCP1 (ENSRBIG00000038337) #22 CPB2 (ENSRBIG00000032565) #23 ENSRBIG00000019806 ZC3H13 (ENSRBIG00000010463) #24 SIAH3 (ENSRBIG00000043429) #25 CBY2 (ENSRBIG00000038551) #26 ENSRBIG00000041417 ERICH6B (ENSRBIG00000029552) COG3 (ENSRBIG00000030800) #27 SLC25A30 (ENSRBIG00000018540) #28 ENSRBIG00000039217 #29 GTF2F2 (ENSRBIG00000021582) #30 KCTD4 (ENSRBIG00000017539) #31 ENSRBIG00000042376 #32 NUFIP1 (ENSRBIG00000029771) #33 ENSRBIG00000039378 Golden snub-nosed monkey MODERN SPECIES 3247 HTR2A (ENSRROG00000028849) ENSRROG00000036419 LRCH1 (ENSRROG00000016368) RUBCNL (ENSRROG00000021688) #19 ENSRROG00000032820 LRRC63 (ENSRROG00000043204) #21 LCP1 (ENSRROG00000033306) #22 ENSRROG00000008703 CPB2 (ENSRROG00000033538) #23 Tarsier MODERN SPECIES 2497 LRRC63 (ENSTSYG00000007261) #21 LCP1 (ENSTSYG00000002743) #22 Strepsirrhini ANCESTRAL SPECIES 27 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.b ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 Lemuriformes ANCESTRAL SPECIES 18 ENSGT00390000016655.a.a.b ENSGT00940000158527 ENSGT01100000263647 ENSGT00940000153137.a.b.b.b ##26 ENSGT00940000155749.d ENSGT00550000075118.i ENSGT00940000160136 ENSGT00940000159738 ENSGT00530000063691.b ENSGT00390000017209 ENSGT00390000013335 ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.b ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 Mouse lemur MODERN SPECIES 4 SERPINE3 (ENSMICG00000029125) INTS6 (ENSMICG00000008106) ENSMICG00000045659 WDFY2 (ENSMICG00000044312) ATP7B (ENSMICG00000005249) ALG11 (ENSMICG00000033695) NEK5 (ENSMICG00000005263) NEK3 (ENSMICG00000005281) CKAP2 (ENSMICG00000006824) VPS36 (ENSMICG00000045748) THSD1 (ENSMICG00000006799) ESD (ENSMICG00000002239) LRCH1 (ENSMICG00000000870) RUBCNL (ENSMICG00000011034) #19 LRRC63 (ENSMICG00000038107) #21 LCP1 (ENSMICG00000005620) #22 CPB2 (ENSMICG00000005613) #23 ZC3H13 (ENSMICG00000014772) #24 SIAH3 (ENSMICG00000028829) #25 CBY2 (ENSMICG00000037001) #26 COG3 (ENSMICG00000002547) #27 SLC25A30 (ENSMICG00000046357) #28 ENSMICG00000002027 #29 KCTD4 (ENSMICG00000041487) #31 GTF2F2 (ENSMICG00000002021) #30 GPALPP1 (ENSMICG00000003425) NUFIP1 (ENSMICG00000003419) #33 TSC22D1 (ENSMICG00000035276) #34 SERP2 (ENSMICG00000047343) #35 OR2G3 (ENSMICG00000047819) OR14K1 (ENSMICG00000028758) Lemuriformes_a ANCESTRAL SPECIES 41 ENSGT00390000016655.a.a.b ENSGT00940000158527 ENSGT01100000263647 ENSGT00940000153137.a.b.b.b ##26 ENSGT00940000155749.d ENSGT00550000075118.i ENSGT00940000160136 ENSGT00940000159738 ENSGT00530000063691.b ENSGT00390000017209 ENSGT00390000013335 ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.b ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 Coquerels sifaka MODERN SPECIES 87 ENSPCOG00000027037 C13orf42 (ENSPCOG00000021956) FAM124A (ENSPCOG00000017096) SERPINE3 (ENSPCOG00000024487) INTS6 (ENSPCOG00000018512) WDFY2 (ENSPCOG00000024351) ATP7B (ENSPCOG00000020764) ENSPCOG00000016600 NEK5 (ENSPCOG00000022271) CKAP2 (ENSPCOG00000023282) VPS36 (ENSPCOG00000022133) THSD1 (ENSPCOG00000000299) LRCH1 (ENSPCOG00000009161) RUBCNL (ENSPCOG00000024398) #19 LRRC63 (ENSPCOG00000011386) #21 LCP1 (ENSPCOG00000014545) #22 ENSPCOG00000019766 SIAH3 (ENSPCOG00000027003) #25 CBY2 (ENSPCOG00000022887) #26 ENSPCOG00000018374 COG3 (ENSPCOG00000025691) #27 SLC25A30 (ENSPCOG00000014493) #28 ENSPCOG00000015914 ##29 ENSPCOG00000023373 #30 KCTD4 (ENSPCOG00000012732) #31 GPALPP1 (ENSPCOG00000019173) NUFIP1 (ENSPCOG00000019764) #33 TSC22D1 (ENSPCOG00000015247) #34 SERP2 (ENSPCOG00000015434) #35 LACC1 (ENSPCOG00000006882) #37 CCDC122 (ENSPCOG00000009651) Greater bamboo lemur MODERN SPECIES 1344 ALG11 (ENSPSMG00000008944) NEK5 (ENSPSMG00000008960) NEK3 (ENSPSMG00000008976) CKAP2 (ENSPSMG00000008991) VPS36 (ENSPSMG00000009017) THSD1 (ENSPSMG00000009046) ESD (ENSPSMG00000009079) LRCH1 (ENSPSMG00000009147) RUBCNL (ENSPSMG00000009198) #19 LRRC63 (ENSPSMG00000009229) #21 LCP1 (ENSPSMG00000009256) #22 CPB2 (ENSPSMG00000009268) #23 ZC3H13 (ENSPSMG00000009290) #24 SIAH3 (ENSPSMG00000009299) #25 CBY2 (ENSPSMG00000009306) #26 COG3 (ENSPSMG00000009350) #27 SLC25A30 (ENSPSMG00000009362) #28 ENSPSMG00000009392 ##29 GTF2F2 (ENSPSMG00000009413) #30 KCTD4 (ENSPSMG00000009417) #31 ENSPSMG00000009433 #32 NUFIP1 (ENSPSMG00000009451) #33 TSC22D1 (ENSPSMG00000009498) #34 SERP2 (ENSPSMG00000009504) #35 Bushbaby MODERN SPECIES 158 ENSOGAG00000009474 TMPRSS12 (ENSOGAG00000034766) ENSOGAG00000000212 ATF1 (ENSOGAG00000026029) DIP2B (ENSOGAG00000005189) LARP4 (ENSOGAG00000001415) ENSOGAG00000029433 ENSOGAG00000007391 LIMA1 (ENSOGAG00000004671) CERS5 (ENSOGAG00000004668) COX14 (ENSOGAG00000004667) GPD1 (ENSOGAG00000004665) ENSOGAG00000004662 ASIC1 (ENSOGAG00000004661) ENSOGAG00000015732 #21 LCP1 (ENSOGAG00000012043) #22 CPB2 (ENSOGAG00000012039) #23 ZC3H13 (ENSOGAG00000012032) #24 SIAH3 (ENSOGAG00000033062) #25 CBY2 (ENSOGAG00000029836) #26 ENSOGAG00000016040 COG3 (ENSOGAG00000016033) #27 SLC25A30 (ENSOGAG00000011571) #28 ENSOGAG00000031453 TPT1 (ENSOGAG00000012523) ##29 KCTD4 (ENSOGAG00000012520) #31 ENSOGAG00000031462 GTF2F2 (ENSOGAG00000012517) #30 GPALPP1 (ENSOGAG00000012513) NUFIP1 (ENSOGAG00000012511) #33 ENSOGAG00000025883 Euarchontoglires_A ANCESTRAL SPECIES 21 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00390000015396 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 Glires ANCESTRAL SPECIES 22 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00390000015396 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 Rodentia ANCESTRAL SPECIES 22 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00390000015396 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 Rodentia_B ANCESTRAL SPECIES 25 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Myomorpha ANCESTRAL SPECIES 32 ENSGT00940000159259.b ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b.c.b ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Muroidea ANCESTRAL SPECIES 25 ENSGT00940000159259.b ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b.c.b ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Muroidea_A ANCESTRAL SPECIES 10 ENSGT00740000115687 ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b.c.b ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 Cricetidae ANCESTRAL SPECIES 15 ENSGT00740000115687 ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b.c.b ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b.a #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 ENSGT00390000005130 Cricetinae ANCESTRAL SPECIES 18 ENSGT00740000115687 ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b.c.b ##29 ENSGT00940000159552 #31 ENSGT00390000016051 #30 ENSGT00390000012569.b.a #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 ENSGT00390000005130 Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 642 Gfra2 (ENSMAUG00000003686) Gm9195 (ENSMAUG00000017114) Fndc3a (ENSMAUG00000011429) ENSMAUG00000008735 Rcbtb2 (ENSMAUG00000013502) Lpar6 (ENSMAUG00000006841) Rb1 (ENSMAUG00000020865) Itm2b (ENSMAUG00000017281) Med4 (ENSMAUG00000021269) Nudt15 (ENSMAUG00000018405) Sucla2 (ENSMAUG00000008374) Htr2a (ENSMAUG00000011880) Esd (ENSMAUG00000021229) Lrch1 (ENSMAUG00000001816) Lrrc63 (ENSMAUG00000017212) #21 ENSMAUG00000017813 #22 Cpb2 (ENSMAUG00000011270) #23 ENSMAUG00000005243 Siah3 (ENSMAUG00000016684) #25 Cby2 (ENSMAUG00000021027) #26 Cog3 (ENSMAUG00000018785) #27 Slc25a30 (ENSMAUG00000012973) #28 Tpt1 (ENSMAUG00000014012) ##29 Kctd4 (ENSMAUG00000005135) #31 Gtf2f2 (ENSMAUG00000018898) #30 Gpalpp1 (ENSMAUG00000021389) #32 Nufip1 (ENSMAUG00000021413) #33 ENSMAUG00000014274 Serp2 (ENSMAUG00000019897) #35 Lacc1 (ENSMAUG00000018912) #37 ENSMAUG00000013996 Golden Hamster MODERN SPECIES 741 Spp2 (ENSMAUG00000019000) Sh3bp4 (ENSMAUG00000015955) Agap1 (ENSMAUG00000013197) Gbx2 (ENSMAUG00000021102) Asb18 (ENSMAUG00000011343) Iqca (ENSMAUG00000012478) Ackr3 (ENSMAUG00000001290) Cops8 (ENSMAUG00000016566) Col6a3 (ENSMAUG00000018474) Mlph (ENSMAUG00000012730) Prlh (ENSMAUG00000007380) Rab17 (ENSMAUG00000000642) ENSMAUG00000008054 Rbm44 (ENSMAUG00000022041) Ramp1 (ENSMAUG00000013655) ENSMAUG00000011807 #22 Ube2f (ENSMAUG00000016797) Scly (ENSMAUG00000015726) Espnl (ENSMAUG00000004027) Klhl30 (ENSMAUG00000020235) Erfe (ENSMAUG00000013436) ENSMAUG00000006511 Hes6 (ENSMAUG00000020931) Per2 (ENSMAUG00000012363) Traf3ip1 (ENSMAUG00000017577) Asb1 (ENSMAUG00000016956) ENSMAUG00000002516 Twist2 (ENSMAUG00000003118) Hdac4 (ENSMAUG00000021483) ENSMAUG00000015249 Or6b2b (ENSMAUG00000002845) Chinese hamster chok1gshd MODERN SPECIES 3 Gm9195 (ENSCGRG00001003097) Fndc3a (ENSCGRG00001020347) ENSCGRG00001010401 Rcbtb2 (ENSCGRG00001016446) Rb1 (ENSCGRG00001022172) Lpar6 (ENSCGRG00001011474) Itm2b (ENSCGRG00001015807) Med4 (ENSCGRG00001018208) Nudt15 (ENSCGRG00001001521) SUCLA2 (ENSCGRG00001009190) HTR2A (ENSCGRG00001000307) ENSCGRG00001015731 Lrch1 (ENSCGRG00001021051) Rubcnl (ENSCGRG00001015225) #19 Lrrc63 (ENSCGRG00001021365) #21 Lcp1 (ENSCGRG00001021099) #22 Cpb2 (ENSCGRG00001000100) #23 Zc3h13 (ENSCGRG00001014490) #24 Siah3 (ENSCGRG00001022985) #25 Cby2 (ENSCGRG00001019775) #26 Cog3 (ENSCGRG00001023420) #27 Slc25a30 (ENSCGRG00001009475) #28 Tpt1 (ENSCGRG00001019454) ##29 Gtf2f2 (ENSCGRG00001015200) #30 Kctd4 (ENSCGRG00001001160) #31 Gpalpp1 (ENSCGRG00001020996) #32 Nufip1 (ENSCGRG00001012209) #33 Tsc22d1 (ENSCGRG00001001346) #34 Serp2 (ENSCGRG00001003518) #35 Lacc1 (ENSCGRG00001020034) #37 Ccdc122 (ENSCGRG00001006861) Cricetidae_B ANCESTRAL SPECIES 11 ENSGT00740000115687 ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b.c.b ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b.a #32 ENSGT00390000003758 #33 ENSGT00940000163647 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 ENSGT00390000005130 Prairie vole MODERN SPECIES 4 Gm9195 (ENSMOCG00000022806) Fndc3a (ENSMOCG00000018330) ENSMOCG00000007313 Rcbtb2 (ENSMOCG00000018787) Rb1 (ENSMOCG00000010218) Lpar6 (ENSMOCG00000007205) Itm2b (ENSMOCG00000021655) Med4 (ENSMOCG00000002608) Nudt15 (ENSMOCG00000003875) ENSMOCG00000011477 Htr2a (ENSMOCG00000012645) ENSMOCG00000016070 Lrch1 (ENSMOCG00000017560) Rubcnl (ENSMOCG00000003331) #19 Lrrc63 (ENSMOCG00000018528) #21 Lcp1 (ENSMOCG00000010746) #22 Cpb2 (ENSMOCG00000006393) #23 ENSMOCG00000001346 Siah3 (ENSMOCG00000009347) #25 Cby2 (ENSMOCG00000014959) #26 Cog3 (ENSMOCG00000002598) #27 Slc25a30 (ENSMOCG00000010410) #28 ENSMOCG00000016698 ##29 Gtf2f2 (ENSMOCG00000020515) #30 Kctd4 (ENSMOCG00000008795) #31 ENSMOCG00000009812 #32 Nufip1 (ENSMOCG00000008223) #33 ENSMOCG00000018072 Serp2 (ENSMOCG00000022234) #35 Lacc1 (ENSMOCG00000011112) #37 Enox1 (ENSMOCG00000012930) Northern American deer mouse MODERN SPECIES 22 ENSPEMG00000031384 ENSPEMG00000006635 Rb1 (ENSPEMG00000020245) Lpar6 (ENSPEMG00000012942) ENSPEMG00000029678 Itm2b (ENSPEMG00000020178) Med4 (ENSPEMG00000000371) Nudt15 (ENSPEMG00000013922) Sucla2 (ENSPEMG00000020269) ENSPEMG00000024389 Htr2a (ENSPEMG00000019339) Esd (ENSPEMG00000019972) Lrch1 (ENSPEMG00000019644) Rubcnl (ENSPEMG00000008281) #19 Lrrc63 (ENSPEMG00000020509) #21 Lcp1 (ENSPEMG00000009810) #22 Cpb2 (ENSPEMG00000021086) #23 Zc3h13 (ENSPEMG00000021979) #24 Siah3 (ENSPEMG00000028254) #25 Cby2 (ENSPEMG00000020758) #26 Cog3 (ENSPEMG00000020827) #27 Slc25a30 (ENSPEMG00000022181) #28 Tpt1 (ENSPEMG00000001813) ##29 Gtf2f2 (ENSPEMG00000027889) #30 Kctd4 (ENSPEMG00000006357) #31 Gpalpp1 (ENSPEMG00000000218) #32 Nufip1 (ENSPEMG00000023639) #33 ENSPEMG00000012421 Tsc22d1 (ENSPEMG00000022760) #34 ENSPEMG00000024909 Lacc1 (ENSPEMG00000011166) #37 Murinae ANCESTRAL SPECIES 16 ENSGT00740000115687 ENSGT00940000159319 ENSGT00990000203619.B ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b.c.b.c.a ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 Mus ANCESTRAL SPECIES 8 ENSGT00740000115687 ENSGT00940000159319 ENSGT00990000203619.B ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b.c.b.c.a ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 Mus_A ANCESTRAL SPECIES 12 ENSGT00740000115687 ENSGT00940000159319 ENSGT00990000203619.B ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b.c.b.c.a ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 Mus_B ANCESTRAL SPECIES 11 ENSGT00740000115687 ENSGT00940000159319 ENSGT00990000203619.B ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864.db ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b.c.b.c.a ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 Mus_C ANCESTRAL SPECIES 20 ENSGT00740000115687 ENSGT00940000159319 ENSGT00990000203619.B ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864.db ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00520000061084 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b.c.b.c.a ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 Steppe mouse MODERN SPECIES 3340 ENSMSIG00000020528 Itm2b (ENSMSIG00000020537) ENSMSIG00000020558 Med4 (ENSMSIG00000020566) Nudt15 (ENSMSIG00000020586) Sucla2 (ENSMSIG00000020594) ENSMSIG00000020657 ENSMSIG00000020679 Htr2a (ENSMSIG00000020690) Esd (ENSMSIG00000020709) Lrch1 (ENSMSIG00000020905) ENSMSIG00000021013 Rubcnl (ENSMSIG00000021027) #19 Lrrc63 (ENSMSIG00000021056) #21 Lcp1 (ENSMSIG00000021079) #22 Cpb2 (ENSMSIG00000021306) #23 Zc3h13 (ENSMSIG00000021317) #24 Siah3 (ENSMSIG00000021424) #25 Cby2 (ENSMSIG00000021441) #26 ENSMSIG00000021463 Cog3 (ENSMSIG00000021489) #27 ENSMSIG00000021594 #28 ENSMSIG00000021620 ##29 Gtf2f2 (ENSMSIG00000021660) #30 ENSMSIG00000021679 Kctd4 (ENSMSIG00000021688) #31 Gpalpp1 (ENSMSIG00000021703) #32 Nufip1 (ENSMSIG00000021714) #33 Tsc22d1 (ENSMSIG00000021724) #34 ENSMSIG00000021792 #35 spretus MODERN SPECIES 5 MGP_SPRETEiJ_G0020390 Cysltr2 (MGP_SPRETEiJ_G0020391) Rcbtb2 (MGP_SPRETEiJ_G0020392) Rb1 (MGP_SPRETEiJ_G0020393) Lpar6 (MGP_SPRETEiJ_G0020394) Itm2b (MGP_SPRETEiJ_G0020395) Med4 (MGP_SPRETEiJ_G0020396) MGP_SPRETEiJ_G0020397 MGP_SPRETEiJ_G0020398 Sucla2 (MGP_SPRETEiJ_G0020399) Htr2a (MGP_SPRETEiJ_G0020400) Esd (MGP_SPRETEiJ_G0020401) Lrch1 (MGP_SPRETEiJ_G0020402) Rubcnl (MGP_SPRETEiJ_G0020403) #19 Lrrc63 (MGP_SPRETEiJ_G0020404) #21 Lcp1 (MGP_SPRETEiJ_G0020405) #22 Cpb2 (MGP_SPRETEiJ_G0020406) #23 Zc3h13 (MGP_SPRETEiJ_G0020407) #24 MGP_SPRETEiJ_G0020408 Siah3 (MGP_SPRETEiJ_G0020409) #25 Cby2 (MGP_SPRETEiJ_G0020410) #26 MGP_SPRETEiJ_G0020411 Cog3 (MGP_SPRETEiJ_G0020412) #27 Slc25a30 (MGP_SPRETEiJ_G0020413) #28 Tpt1 (MGP_SPRETEiJ_G0020414) ##29 Gtf2f2 (MGP_SPRETEiJ_G0020415) #30 Kctd4 (MGP_SPRETEiJ_G0020416) #31 Gpalpp1 (MGP_SPRETEiJ_G0020417) #32 Nufip1 (MGP_SPRETEiJ_G0020418) #33 Tsc22d1 (MGP_SPRETEiJ_G0020419) #34 Serp2 (MGP_SPRETEiJ_G0020420) #35 Mouse MODERN SPECIES 5 Gm9195 (ENSMUSG00000109446) Fndc3a (ENSMUSG00000033487) Cysltr2 (ENSMUSG00000033470) Rcbtb2 (ENSMUSG00000022106) Rb1 (ENSMUSG00000022105) Lpar6 (ENSMUSG00000033446) Itm2b (ENSMUSG00000022108) Med4 (ENSMUSG00000022109) Nudt15 (ENSMUSG00000033405) Sucla2 (ENSMUSG00000022110) Htr2a (ENSMUSG00000034997) Esd (ENSMUSG00000021996) Lrch1 (ENSMUSG00000068015) Rubcnl (ENSMUSG00000034959) #19 Lrrc63 (ENSMUSG00000021997) #21 Lcp1 (ENSMUSG00000021998) #22 Cpb2 (ENSMUSG00000021999) #23 Zc3h13 (ENSMUSG00000022000) #24 Siah3 (ENSMUSG00000091722) #25 Cby2 (ENSMUSG00000034913) #26 Erich6b (ENSMUSG00000022002) Cog3 (ENSMUSG00000034893) #27 Slc25a30 (ENSMUSG00000022003) #28 Tpt1 (ENSMUSG00000060126) ##29 Gtf2f2 (ENSMUSG00000067995) #30 Kctd4 (ENSMUSG00000046523) #31 Gpalpp1 (ENSMUSG00000022008) #32 Nufip1 (ENSMUSG00000022009) #33 Tsc22d1 (ENSMUSG00000022010) #34 Serp2 (ENSMUSG00000052584) #35 Lacc1 (ENSMUSG00000044350) #37 Ryukyu mouse MODERN SPECIES 5 Gfra2 (MGP_CAROLIEiJ_G0019495) Fndc3a (MGP_CAROLIEiJ_G0019496) Cysltr2 (MGP_CAROLIEiJ_G0019497) Rcbtb2 (MGP_CAROLIEiJ_G0019498) Rb1 (MGP_CAROLIEiJ_G0019499) Lpar6 (MGP_CAROLIEiJ_G0019500) Itm2b (MGP_CAROLIEiJ_G0019501) Med4 (MGP_CAROLIEiJ_G0019502) Nudt15 (MGP_CAROLIEiJ_G0019503) Sucla2 (MGP_CAROLIEiJ_G0019504) Htr2a (MGP_CAROLIEiJ_G0019505) Esd (MGP_CAROLIEiJ_G0019506) Lrch1 (MGP_CAROLIEiJ_G0019507) Rubcnl (MGP_CAROLIEiJ_G0019508) #19 Lrrc63 (MGP_CAROLIEiJ_G0019509) #21 Lcp1 (MGP_CAROLIEiJ_G0019510) #22 Cpb2 (MGP_CAROLIEiJ_G0019511) #23 Zc3h13 (MGP_CAROLIEiJ_G0019512) #24 Siah3 (MGP_CAROLIEiJ_G0019513) #25 Cby2 (MGP_CAROLIEiJ_G0019514) #26 MGP_CAROLIEiJ_G0019515 Cog3 (MGP_CAROLIEiJ_G0019516) #27 Slc25a30 (MGP_CAROLIEiJ_G0019517) #28 Tpt1 (MGP_CAROLIEiJ_G0019518) ##29 Gtf2f2 (MGP_CAROLIEiJ_G0019519) #30 Kctd4 (MGP_CAROLIEiJ_G0019520) #31 Gpalpp1 (MGP_CAROLIEiJ_G0019521) #32 Nufip1 (MGP_CAROLIEiJ_G0019522) #33 Tsc22d1 (MGP_CAROLIEiJ_G0019523) #34 Serp2 (MGP_CAROLIEiJ_G0019524) #35 MGP_CAROLIEiJ_G0019525 #37 Shrew mouse MODERN SPECIES 21 Fndc3a (MGP_PahariEiJ_G0030513) Cysltr2 (MGP_PahariEiJ_G0030514) Rcbtb2 (MGP_PahariEiJ_G0030515) Rb1 (MGP_PahariEiJ_G0030516) Lpar6 (MGP_PahariEiJ_G0030517) Itm2b (MGP_PahariEiJ_G0030518) Med4 (MGP_PahariEiJ_G0030519) MGP_PahariEiJ_G0030520 MGP_PahariEiJ_G0030521 Sucla2 (MGP_PahariEiJ_G0030522) Htr2a (MGP_PahariEiJ_G0030523) Esd (MGP_PahariEiJ_G0030524) Lrch1 (MGP_PahariEiJ_G0030525) Rubcnl (MGP_PahariEiJ_G0030526) #19 Lrrc63 (MGP_PahariEiJ_G0030527) #21 Lcp1 (MGP_PahariEiJ_G0030528) #22 Cpb2 (MGP_PahariEiJ_G0030529) #23 Zc3h13 (MGP_PahariEiJ_G0030530) #24 Siah3 (MGP_PahariEiJ_G0030531) #25 Cby2 (MGP_PahariEiJ_G0030532) #26 MGP_PahariEiJ_G0030533 Cog3 (MGP_PahariEiJ_G0030534) #27 Slc25a30 (MGP_PahariEiJ_G0030535) #28 Tpt1 (MGP_PahariEiJ_G0030536) ##29 Gtf2f2 (MGP_PahariEiJ_G0030537) #30 Kctd4 (MGP_PahariEiJ_G0030538) #31 Gpalpp1 (MGP_PahariEiJ_G0030539) #32 Nufip1 (MGP_PahariEiJ_G0030540) #33 Tsc22d1 (MGP_PahariEiJ_G0030541) #34 Serp2 (MGP_PahariEiJ_G0030542) #35 Lacc1 (MGP_PahariEiJ_G0030543) #37 Rat MODERN SPECIES 6 Cysltr2 (ENSRNOG00000067464) ENSRNOG00000067330 Rcbtb2 (ENSRNOG00000015054) Rb1 (ENSRNOG00000016029) Lpar6 (ENSRNOG00000015577) Itm2b (ENSRNOG00000016271) Med4 (ENSRNOG00000017170) Nudt15 (ENSRNOG00000025239) Sucla2 (ENSRNOG00000017481) Htr2a (ENSRNOG00000010063) Esd (ENSRNOG00000009512) Lrch1 (ENSRNOG00000009412) Rubcnl (ENSRNOG00000022760) #19 Lrrc63 (ENSRNOG00000038291) #21 Esco2-ps2 (ENSRNOG00000029520) Lcp1 (ENSRNOG00000010319) #22 Cpb2 (ENSRNOG00000010935) #23 Zc3h13 (ENSRNOG00000011237) #24 Siah3 (ENSRNOG00000043061) #25 Cby2 (ENSRNOG00000047413) #26 Cog3 (ENSRNOG00000000155) #27 Slc25a30 (ENSRNOG00000001052) #28 Tpt1 (ENSRNOG00000001049) ##29 Gtf2f2 (ENSRNOG00000029316) #30 Kctd4 (ENSRNOG00000050996) #31 Gpalpp1 (ENSRNOG00000001037) #32 Nufip1 (ENSRNOG00000001033) #33 ENSRNOG00000070802 Tsc22d1 (ENSRNOG00000001030) #34 Serp2 (ENSRNOG00000038228) #35 Lacc1 (ENSRNOG00000022094) #37 Upper Galilee mountains blind mole rat MODERN SPECIES 1865 Atp12a (ENSNGAG00000019943) Fndc3a (ENSNGAG00000010472) ENSNGAG00000018220 Rcbtb2 (ENSNGAG00000001130) Rb1 (ENSNGAG00000018650) Lpar6 (ENSNGAG00000020986) Itm2b (ENSNGAG00000001145) ENSNGAG00000019721 Med4 (ENSNGAG00000016010) Nudt15 (ENSNGAG00000017219) Sucla2 (ENSNGAG00000018304) Htr2a (ENSNGAG00000003790) Esd (ENSNGAG00000010945) Lrch1 (ENSNGAG00000018822) Lrrc63 (ENSNGAG00000020059) #21 Lcp1 (ENSNGAG00000000826) #22 Cpb2 (ENSNGAG00000014141) #23 Zc3h13 (ENSNGAG00000002157) #24 Siah3 (ENSNGAG00000012014) #25 ENSNGAG00000013989 Cby2 (ENSNGAG00000015369) #26 Lesser Egyptian jerboa MODERN SPECIES 126 Fndc3a (ENSJJAG00000014349) Cysltr2 (ENSJJAG00000012101) Rcbtb2 (ENSJJAG00000013527) Lpar6 (ENSJJAG00000013010) Rb1 (ENSJJAG00000011981) Itm2b (ENSJJAG00000010530) Med4 (ENSJJAG00000010462) ENSJJAG00000010126 ENSJJAG00000009879 ENSJJAG00000012033 ENSJJAG00000006493 Htr2a (ENSJJAG00000005538) Esd (ENSJJAG00000004979) Lrch1 (ENSJJAG00000000346) Rubcnl (ENSJJAG00000021497) #19 Lcp1 (ENSJJAG00000021331) #22 Cpb2 (ENSJJAG00000020705) #23 Zc3h13 (ENSJJAG00000019971) #24 ENSJJAG00000019522 Siah3 (ENSJJAG00000019440) #25 Cby2 (ENSJJAG00000019147) #26 Cog3 (ENSJJAG00000018271) #27 Slc25a30 (ENSJJAG00000017335) #28 ENSJJAG00000016940 ENSJJAG00000016541 ##29 Kctd4 (ENSJJAG00000012151) #31 Gtf2f2 (ENSJJAG00000015891) #30 Gpalpp1 (ENSJJAG00000015544) #32 Nufip1 (ENSJJAG00000015369) #33 ENSJJAG00000015078 Serp2 (ENSJJAG00000021557) #35 Kangaroo rat MODERN SPECIES 320 Fndc3a (ENSDORG00000000383) ENSDORG00000029762 ENSDORG00000016215 Rcbtb2 (ENSDORG00000013999) Lpar6 (ENSDORG00000013998) Rb1 (ENSDORG00000013995) Itm2b (ENSDORG00000025543) Med4 (ENSDORG00000024480) Nudt15 (ENSDORG00000003751) Sucla2 (ENSDORG00000010319) Htr2a (ENSDORG00000029019) Esd (ENSDORG00000013997) Lrch1 (ENSDORG00000013992) ENSDORG00000024657 Rubcnl (ENSDORG00000014634) #19 Lcp1 (ENSDORG00000000603) #22 Cpb2 (ENSDORG00000000602) #23 Zc3h13 (ENSDORG00000000600) #24 Siah3 (ENSDORG00000024143) #25 Cby2 (ENSDORG00000026204) #26 Cog3 (ENSDORG00000002499) #27 Slc25a30 (ENSDORG00000004865) #28 Tpt1 (ENSDORG00000008518) ##29 Kctd4 (ENSDORG00000003773) #31 Gtf2f2 (ENSDORG00000002860) #30 Gpalpp1 (ENSDORG00000003360) #32 Nufip1 (ENSDORG00000003359) #33 ENSDORG00000025839 Serp2 (ENSDORG00000028153) #35 Lacc1 (ENSDORG00000015240) #37 Ccdc122 (ENSDORG00000015236) Rodentia_A ANCESTRAL SPECIES 22 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00390000015396 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.a ##29 ENSGT00390000006051.b.f ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT01060000249039 Hystricomorpha ANCESTRAL SPECIES 25 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864.y ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00390000015396 ENSGT00940000158961 #28 ENSGT00390000006051.b.f.a ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00940000163647 ENSGT00940000162467.b #35 Naked mole-rat female MODERN SPECIES 2 RB1 (ENSHGLG00000003581) ENSHGLG00000012986 ENSHGLG00000013614 MED4 (ENSHGLG00000013271) NUDT15 (ENSHGLG00000037073) ENSHGLG00000006869 ENSHGLG00000006924 ENSHGLG00000019880 ##29 ENSHGLG00000044798 HTR2A (ENSHGLG00000041937) ENSHGLG00000002764 LRCH1 (ENSHGLG00000003678) ENSHGLG00000005637 RUBCNL (ENSHGLG00000043639) #19 ENSHGLG00000043742 #21 LCP1 (ENSHGLG00000002813) #22 CPB2 (ENSHGLG00000003312) #23 ZC3H13 (ENSHGLG00000006309) #24 SIAH3 (ENSHGLG00000008529) #25 CBY2 (ENSHGLG00000009737) #26 ENSHGLG00000002801 #27 ENSHGLG00000043699 ENSHGLG00000003289 #28 ENSHGLG00000003878 ENSHGLG00000005278 ##29 ENSHGLG00000007884 #30 KCTD4 (ENSHGLG00000008886) #31 ENSHGLG00000041102 #32 NUFIP1 (ENSHGLG00000046882) #33 TSC22D1 (ENSHGLG00000009007) #34 ENSHGLG00000038690 Hystricomorpha_a ANCESTRAL SPECIES 21 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864.y ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.a.p ##29 ENSGT00940000159552 #31 ENSGT00390000016051 #30 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT01060000249039 ENSGT00390000000693 #37 ENSGT00390000005130 Guinea pig MODERN SPECIES 6 CDADC1 (ENSCPOG00000003715) FNDC3A (ENSCPOG00000003704) CYSLTR2 (ENSCPOG00000001597) RCBTB2 (ENSCPOG00000008702) LPAR6 (ENSCPOG00000036002) RB1 (ENSCPOG00000008683) ITM2B (ENSCPOG00000039088) MED4 (ENSCPOG00000039834) ENSCPOG00000015058 ENSCPOG00000038770 SUCLA2 (ENSCPOG00000014961) HTR2A (ENSCPOG00000038918) ESD (ENSCPOG00000011089) LRCH1 (ENSCPOG00000011077) RUBCNL (ENSCPOG00000008458) #19 LCP1 (ENSCPOG00000001937) #22 CPB2 (ENSCPOG00000000649) #23 ZC3H13 (ENSCPOG00000000646) #24 SIAH3 (ENSCPOG00000033748) #25 CBY2 (ENSCPOG00000036575) #26 COG3 (ENSCPOG00000009924) #27 SLC25A30 (ENSCPOG00000031582) #28 ENSCPOG00000009278 ##29 KCTD4 (ENSCPOG00000009346) #31 GTF2F2 (ENSCPOG00000009342) #30 ENSCPOG00000026022 #32 NUFIP1 (ENSCPOG00000005828) #33 TSC22D1 (ENSCPOG00000000560) #34 ENSCPOG00000031530 LACC1 (ENSCPOG00000011253) #37 CCDC122 (ENSCPOG00000003514) Hystricomorpha_b ANCESTRAL SPECIES 44 ENSGT00940000156894 ENSGT00940000155454 ENSGT00940000155219 ENSGT00480000042679.b.b ENSGT00390000013700 ENSGT00940000157039.b ENSGT00390000013956 ENSGT00940000155175.A ENSGT00940000156877 ENSGT00950000183174.B.b ENSGT00390000011709 ENSGT00390000006601 ENSGT00940000158106 ENSGT00940000153313.B ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.b.f.a ##29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT01060000249039 ENSGT00390000000693 #37 ENSGT00390000005130 Long-tailed chinchilla MODERN SPECIES 225 KBTBD7 (ENSCLAG00000017423) MTRF1 (ENSCLAG00000000582) NAA16 (ENSCLAG00000000566) RGCC (ENSCLAG00000000799) VWA8 (ENSCLAG00000001287) DGKH (ENSCLAG00000000480) AKAP11 (ENSCLAG00000000420) LRRC63 (ENSCLAG00000000306) #21 LCP1 (ENSCLAG00000000191) #22 ENSCLAG00000000122 ENSCLAG00000000776 CPB2 (ENSCLAG00000000655) #23 ZC3H13 (ENSCLAG00000000610) #24 SIAH3 (ENSCLAG00000000493) #25 CBY2 (ENSCLAG00000000430) #26 COG3 (ENSCLAG00000000745) #27 SLC25A30 (ENSCLAG00000000339) #28 KCTD4 (ENSCLAG00000000309) #31 ENSCLAG00000000205 #30 ENSCLAG00000000164 #32 NUFIP1 (ENSCLAG00000000114) #33 TSC22D1 (ENSCLAG00000001734) #34 ENSCLAG00000001695 LACC1 (ENSCLAG00000001645) #37 Degu DUPLICATION Degu MODERN SPECIES 163 ELF1 (ENSODEG00000005272) ENSODEG00000005378 WBP4 (ENSODEG00000005811) ENSODEG00000004948 KBTBD7 (ENSODEG00000019293) MTRF1 (ENSODEG00000005782) ENSODEG00000006513 RGCC (ENSODEG00000005723) VWA8 (ENSODEG00000006290) ENSODEG00000005696 ENSODEG00000019364 ENSODEG00000019318 ENSODEG00000006776 DGKH (ENSODEG00000006365) AKAP11 (ENSODEG00000006558) ENSODEG00000007562 #22 CPB2 (ENSODEG00000005426) #23 ZC3H13 (ENSODEG00000005178) #24 SIAH3 (ENSODEG00000006861) #25 CBY2 (ENSODEG00000007190) #26 COG3 (ENSODEG00000006373) #27 SLC25A30 (ENSODEG00000005522) #28 ENSODEG00000005658 ##29 GTF2F2 (ENSODEG00000006595) #30 KCTD4 (ENSODEG00000019362) #31 ENSODEG00000006647 ENSODEG00000005907 #32 ENSODEG00000006393 NUFIP1 (ENSODEG00000006473) #33 ENSODEG00000005705 ENSODEG00000006384 Degu MODERN SPECIES 188 STXBP5L (ENSODEG00000007458) POLQ (ENSODEG00000007851) FBXO40 (ENSODEG00000008932) ENSODEG00000008646 #22 HCLS1 (ENSODEG00000009049) GOLGB1 (ENSODEG00000007972) IQCB1 (ENSODEG00000007907) EAF2 (ENSODEG00000007603) SLC15A2 (ENSODEG00000010727) ILDR1 (ENSODEG00000007516) ENSODEG00000019503 CASR (ENSODEG00000009812) CSTA (ENSODEG00000007909) ENSODEG00000008197 FAM162A (ENSODEG00000008867) WDR5B (ENSODEG00000019471) ENSODEG00000019490 KPNA1 (ENSODEG00000008059) PARP9 (ENSODEG00000010249) Sciuridae ANCESTRAL SPECIES 34 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.a ##29 ENSGT00390000006051.b.f ##29 ENSGT00390000016051.u.b #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 Marmotini ANCESTRAL SPECIES 29 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.a ##29 ENSGT00390000006051.b.f ##29 ENSGT00390000016051.u.b #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Marmotini_b ANCESTRAL SPECIES 219 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.b.f ##29 ENSGT00390000016051.u.b #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT01060000249039 Arctic ground squirrel MODERN SPECIES 822 LCP1 (ENSUPAG00010010673) #22 CPB2 (ENSUPAG00010010691) #23 ZC3H13 (ENSUPAG00010010699) #24 Squirrel MODERN SPECIES 456 LCP1 (ENSSTOG00000011735) #22 CPB2 (ENSSTOG00000010700) #23 ZC3H13 (ENSSTOG00000029682) #24 SIAH3 (ENSSTOG00000021529) #25 CBY2 (ENSSTOG00000003207) #26 COG3 (ENSSTOG00000003137) #27 SLC25A30 (ENSSTOG00000003168) #28 Alpin marmot MODERN SPECIES 13 ENSMMMG00000023108 FNDC3A (ENSMMMG00000023109) CYSLTR2 (ENSMMMG00000023126) RCBTB2 (ENSMMMG00000023136) RB1 (ENSMMMG00000023141) LPAR6 (ENSMMMG00000023147) ITM2B (ENSMMMG00000023154) MED4 (ENSMMMG00000023156) NUDT15 (ENSMMMG00000023158) SUCLA2 (ENSMMMG00000023163) HTR2A (ENSMMMG00000023175) ESD (ENSMMMG00000023189) LRCH1 (ENSMMMG00000023214) RUBCNL (ENSMMMG00000023314) #19 LRRC63 (ENSMMMG00000023317) #21 LCP1 (ENSMMMG00000023327) #22 CPB2 (ENSMMMG00000023337) #23 ZC3H13 (ENSMMMG00000023343) #24 SIAH3 (ENSMMMG00000023403) #25 CBY2 (ENSMMMG00000023405) #26 COG3 (ENSMMMG00000023415) #27 SLC25A30 (ENSMMMG00000023425) #28 ENSMMMG00000023427 ##29 ENSMMMG00000023432 #30 KCTD4 (ENSMMMG00000023434) #31 ENSMMMG00000023435 ENSMMMG00000023437 #32 NUFIP1 (ENSMMMG00000023439) #33 TSC22D1 (ENSMMMG00000023448) #34 LACC1 (ENSMMMG00000023463) #37 CCDC122 (ENSMMMG00000023465) Eurasian red squirrel MODERN SPECIES 13 ENSSVLG00005002047 ITM2B (ENSSVLG00005002020) MED4 (ENSSVLG00005001989) ENSSVLG00005001974 SUCLA2 (ENSSVLG00005001944) ENSSVLG00005001859 ENSSVLG00005001827 LRCH1 (ENSSVLG00005001766) RUBCNL (ENSSVLG00005001693) #19 ENSSVLG00005001657 ENSSVLG00005001636 ENSSVLG00005001618 ENSSVLG00005001599 ENSSVLG00005001588 LRRC63 (ENSSVLG00005001547) #21 LCP1 (ENSSVLG00005001488) #22 CPB2 (ENSSVLG00005001440) #23 ZC3H13 (ENSSVLG00005001347) #24 SIAH3 (ENSSVLG00005001312) #25 CBY2 (ENSSVLG00005001296) #26 ENSSVLG00005001222 #27 SLC25A30 (ENSSVLG00005001187) #28 ENSSVLG00005001160 ENSSVLG00005001144 ENSSVLG00005001090 #29 KCTD4 (ENSSVLG00005001062) #31 ENSSVLG00005001046 #30 ENSSVLG00005001028 ENSSVLG00005001012 ENSSVLG00005000987 #32 NUFIP1 (ENSSVLG00005000955) #33 Lagomorpha ANCESTRAL SPECIES 56 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000163647 ENSGT00940000162467.b #35 ENSGT00390000014262 #36 Rabbit MODERN SPECIES 19 GJB6 (ENSOCUG00000026851) ENSOCUG00000035218 GJB2 (ENSOCUG00000010156) GJA3 (ENSOCUG00000003931) ZMYM2 (ENSOCUG00000017086) ZMYM5 (ENSOCUG00000013877) PSPC1 (ENSOCUG00000006153) MPHOSPH8 (ENSOCUG00000000429) PARP4 (ENSOCUG00000014529) CENPJ (ENSOCUG00000007405) RNF17 (ENSOCUG00000007384) ATP12A (ENSOCUG00000007374) ENSOCUG00000017323 RUBCNL (ENSOCUG00000009941) #19 LRRC63 (ENSOCUG00000014059) #21 LCP1 (ENSOCUG00000017943) #22 CPB2 (ENSOCUG00000017940) #23 ENSOCUG00000031267 ZC3H13 (ENSOCUG00000015173) #24 ENSOCUG00000024639 SIAH3 (ENSOCUG00000029756) #25 CBY2 (ENSOCUG00000014037) #26 ENSOCUG00000002490 COG3 (ENSOCUG00000002476) #27 SLC25A30 (ENSOCUG00000008419) #28 ENSOCUG00000023692 #29 GTF2F2 (ENSOCUG00000003537) #30 KCTD4 (ENSOCUG00000013829) #31 ENSOCUG00000007277 #32 NUFIP1 (ENSOCUG00000007273) #33 ENSOCUG00000027968 Pika MODERN SPECIES 4456 LCP1 (ENSOPRG00000000423) #22 CPB2 (ENSOPRG00000000418) #23 Tree shrew MODERN SPECIES 1007 LCP1 (ENSTBEG00000002262) #22 CPB2 (ENSTBEG00000001482) #23 ENSTBEG00000009129 Laurasiatheria ANCESTRAL SPECIES 20 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051.j #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Laurasiatheria_a ANCESTRAL SPECIES 21 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051.j #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Artiodactyla ANCESTRAL SPECIES 21 ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.a ##29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Suina ANCESTRAL SPECIES 29 ENSGT00940000159319 ENSGT01050000247867 ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051.j #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000014262 #36 ENSGT00390000000693 #37 Chacoan peccary MODERN SPECIES 216 FNDC3A (ENSCWAG00000002000) ENSCWAG00000001972 ENSCWAG00000001961 RCBTB2 (ENSCWAG00000001915) LPAR6 (ENSCWAG00000001900) RB1 (ENSCWAG00000001887) ITM2B (ENSCWAG00000001848) MED4 (ENSCWAG00000001822) NUDT15 (ENSCWAG00000001809) SUCLA2 (ENSCWAG00000001786) HTR2A (ENSCWAG00000001769) ESD (ENSCWAG00000001743) LRCH1 (ENSCWAG00000001714) RUBCNL (ENSCWAG00000001665) #19 LRRC63 (ENSCWAG00000001640) #21 LCP1 (ENSCWAG00000001619) #22 CPB2 (ENSCWAG00000001574) #23 ZC3H13 (ENSCWAG00000001530) #24 SIAH3 (ENSCWAG00000001512) #25 CBY2 (ENSCWAG00000001489) #26 COG3 (ENSCWAG00000001427) #27 SLC25A30 (ENSCWAG00000001395) #28 TPT1 (ENSCWAG00000001363) #29 KCTD4 (ENSCWAG00000001334) #31 GTF2F2 (ENSCWAG00000001321) #30 ENSCWAG00000001303 ENSCWAG00000001284 #32 NUFIP1 (ENSCWAG00000001267) #33 TSC22D1 (ENSCWAG00000001219) #34 SERP2 (ENSCWAG00000001186) #35 ENSCWAG00000001170 Pig MODERN SPECIES 2 ENSSSCG00000048866 ENSSSCG00000039832 CYSLTR2 (ENSSSCG00000009399) RCBTB2 (ENSSSCG00000009400) RB1 (ENSSSCG00000009401) LPAR6 (ENSSSCG00000061460) ITM2B (ENSSSCG00000009403) MED4 (ENSSSCG00000035098) NUDT15 (ENSSSCG00000027551) SUCLA2 (ENSSSCG00000009405) HTR2A (ENSSSCG00000037452) ESD (ENSSSCG00000009407) LRCH1 (ENSSSCG00000009408) RUBCNL (ENSSSCG00000009410) #19 LRRC63 (ENSSSCG00000009411) #21 LCP1 (ENSSSCG00000009412) #22 ENSSSCG00000034648 CPB2 (ENSSSCG00000009413) #23 ZC3H13 (ENSSSCG00000009414) #24 SIAH3 (ENSSSCG00000038733) #25 CBY2 (ENSSSCG00000009417) #26 COG3 (ENSSSCG00000023738) #27 SLC25A30 (ENSSSCG00000062876) #28 ENSSSCG00000048332 TPT1 (ENSSSCG00000040929) #29 GTF2F2 (ENSSSCG00000034156) #30 KCTD4 (ENSSSCG00000022868) #31 ENSSSCG00000009419 #32 NUFIP1 (ENSSSCG00000009420) #33 ENSSSCG00000009422 SERP2 (ENSSSCG00000040405) #35 Artiodactyla_a ANCESTRAL SPECIES 22 ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.a.a.a ##29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Artiodactyla_b ANCESTRAL SPECIES 22 ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.a.a.a ##29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Cetacea ANCESTRAL SPECIES 20 ENSGT01100000263536.B.c.a ENSGT00940000159853.k ENSGT00990000203619.B ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338.s.a ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.b ##29 ENSGT00390000016051.j #30 ENSGT00940000159552 #31 ENSGT00390000015889.o.b.b ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000014262 #36 Odontoceti ANCESTRAL SPECIES 21 ENSGT01100000263536.B.c.a ENSGT00940000159853.k ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338.s.a ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.b ##29 ENSGT00390000006051.a.a.a.a ##29 ENSGT00390000016051.j #30 ENSGT00940000159552 #31 ENSGT00390000015889.o.b.b ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 Odontoceti_a ANCESTRAL SPECIES 24 ENSGT00940000159319 ENSGT00940000159853.k ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338.s.a ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961.e #28 ENSGT00390000006051.a.a.a.a ##29 ENSGT00390000016051.j #30 ENSGT00940000159552 #31 ENSGT00390000015889.o.b.b ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 Odontoceti_b ANCESTRAL SPECIES 21 ENSGT00940000159319 ENSGT00940000159853.k ENSGT00990000203619.B ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338.s.a ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961.e #28 ENSGT00390000006051.a.a.a.a ##29 ENSGT00390000016051.j #30 ENSGT00940000159552 #31 ENSGT00390000015889.o.b.b ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000154185.g.a ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 Monodontidae ANCESTRAL SPECIES 15 ENSGT00940000159319 ENSGT00940000159853.k ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338.s.a ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961.e #28 ENSGT00940000154194.kb.a ENSGT00390000006051.a.a.a.a ##29 ENSGT00390000016051.j #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000154185.g.a ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 Narwhal MODERN SPECIES 315 FNDC3A (ENSMMNG00015015574) ENSMMNG00015015538 ENSMMNG00015015535 RCBTB2 (ENSMMNG00015015490) LPAR6 (ENSMMNG00015015469) RB1 (ENSMMNG00015015417) ITM2B (ENSMMNG00015015387) MED4 (ENSMMNG00015015360) ENSMMNG00015015349 SUCLA2 (ENSMMNG00015015328) HTR2A (ENSMMNG00015015311) ESD (ENSMMNG00015015295) LRCH1 (ENSMMNG00015015247) RUBCNL (ENSMMNG00015015197) #19 LRRC63 (ENSMMNG00015015165) #21 LCP1 (ENSMMNG00015015119) #22 CPB2 (ENSMMNG00015015086) #23 ZC3H13 (ENSMMNG00015015021) #24 SIAH3 (ENSMMNG00015015004) #25 CBY2 (ENSMMNG00015014993) #26 COG3 (ENSMMNG00015014965) #27 ENSMMNG00015014952 #28 ENSMMNG00015014942 ENSMMNG00015014913 ##29 KCTD4 (ENSMMNG00015014888) #31 GTF2F2 (ENSMMNG00015014875) #30 ENSMMNG00015014855 #32 NUFIP1 (ENSMMNG00015014826) #33 TSC22D1 (ENSMMNG00015014797) #34 SERP2 (ENSMMNG00015014783) #35 LACC1 (ENSMMNG00015014682) #37 Beluga whale MODERN SPECIES 29 FNDC3A (ENSDLEG00000017835) CYSLTR2 (ENSDLEG00000017910) RCBTB2 (ENSDLEG00000017915) RB1 (ENSDLEG00000017962) LPAR6 (ENSDLEG00000018142) ITM2B (ENSDLEG00000018145) MED4 (ENSDLEG00000018152) NUDT15 (ENSDLEG00000006593) ENSDLEG00000006598 ENSDLEG00000006628 HTR2A (ENSDLEG00000006633) ESD (ENSDLEG00000006636) LRCH1 (ENSDLEG00000006642) RUBCNL (ENSDLEG00000006651) #19 LRRC63 (ENSDLEG00000006661) #21 LCP1 (ENSDLEG00000006675) #22 CPB2 (ENSDLEG00000006697) #23 ZC3H13 (ENSDLEG00000006744) #24 SIAH3 (ENSDLEG00000006761) #25 CBY2 (ENSDLEG00000006765) #26 SLC25A30 (ENSDLEG00000006823) #27 ENSDLEG00000007053 ENSDLEG00000007063 ##29 GTF2F2 (ENSDLEG00000007077) #30 KCTD4 (ENSDLEG00000007081) #31 GPALPP1 (ENSDLEG00000007086) #32 NUFIP1 (ENSDLEG00000007090) #33 ENSDLEG00000007097 TSC22D1 (ENSDLEG00000007106) #34 ENSDLEG00000007116 #35 LACC1 (ENSDLEG00000007121) #37 Vaquita MODERN SPECIES 9 ENSPSNG00000011098 ENSPSNG00000011140 RCBTB2 (ENSPSNG00000011199) RB1 (ENSPSNG00000011372) LPAR6 (ENSPSNG00000011434) ITM2B (ENSPSNG00000011455) MED4 (ENSPSNG00000011552) ENSPSNG00000011620 ENSPSNG00000011663 SUCLA2 (ENSPSNG00000011705) HTR2A (ENSPSNG00000011806) ESD (ENSPSNG00000011858) LRCH1 (ENSPSNG00000011958) RUBCNL (ENSPSNG00000012216) #19 LRRC63 (ENSPSNG00000012567) #21 LCP1 (ENSPSNG00000012692) #22 CPB2 (ENSPSNG00000012884) #23 ZC3H13 (ENSPSNG00000013177) #24 SIAH3 (ENSPSNG00000013279) #25 CBY2 (ENSPSNG00000013325) #26 COG3 (ENSPSNG00000013423) #27 ENSPSNG00000013532 #28 ENSPSNG00000013603 ENSPSNG00000013707 ##29 GTF2F2 (ENSPSNG00000013930) #30 KCTD4 (ENSPSNG00000013990) #31 ENSPSNG00000014019 ENSPSNG00000014046 #32 NUFIP1 (ENSPSNG00000014196) #33 ENSPSNG00000014291 TSC22D1 (ENSPSNG00000014372) #34 Dolphin MODERN SPECIES 131 RUBCNL (ENSTTRG00000003615) #19 LRRC63 (ENSTTRG00000003614) #21 LCP1 (ENSTTRG00000003613) #22 CPB2 (ENSTTRG00000003612) #23 ZC3H13 (ENSTTRG00000003611) #24 Sperm whale MODERN SPECIES 4 CYSLTR2 (ENSPCTG00005017388) RCBTB2 (ENSPCTG00005017419) RB1 (ENSPCTG00005017710) LPAR6 (ENSPCTG00005017780) ITM2B (ENSPCTG00005017804) MED4 (ENSPCTG00005017893) ENSPCTG00005017946 ENSPCTG00005017963 SUCLA2 (ENSPCTG00005018015) HTR2A (ENSPCTG00005018130) ESD (ENSPCTG00005018195) LRCH1 (ENSPCTG00005018266) ENSPCTG00005018927 RUBCNL (ENSPCTG00005019002) #19 LRRC63 (ENSPCTG00005019334) #21 LCP1 (ENSPCTG00005019437) #22 CPB2 (ENSPCTG00005019480) #23 ZC3H13 (ENSPCTG00005019642) #24 SIAH3 (ENSPCTG00005019682) #25 CBY2 (ENSPCTG00005019720) #26 COG3 (ENSPCTG00005019832) #27 SLC25A30 (ENSPCTG00005019936) #28 TPT1 (ENSPCTG00005020016) ##29 GTF2F2 (ENSPCTG00005020225) #30 KCTD4 (ENSPCTG00005020248) #31 ENSPCTG00005020258 GPALPP1 (ENSPCTG00005020323) #32 NUFIP1 (ENSPCTG00005020401) #33 ENSPCTG00005020454 TSC22D1 (ENSPCTG00005020590) #34 SERP2 (ENSPCTG00005020663) #35 Blue whale MODERN SPECIES 9 MLNR (ENSBMSG00010014851) FNDC3A (ENSBMSG00010014911) CYSLTR2 (ENSBMSG00010015059) RCBTB2 (ENSBMSG00010015126) RB1 (ENSBMSG00010015354) LPAR6 (ENSBMSG00010015391) ITM2B (ENSBMSG00010015413) MED4 (ENSBMSG00010015472) ENSBMSG00010015507 SUCLA2 (ENSBMSG00010015547) HTR2A (ENSBMSG00010015606) ESD (ENSBMSG00010015643) LRCH1 (ENSBMSG00010015742) RUBCNL (ENSBMSG00010016070) #19 LRRC63 (ENSBMSG00010016199) #21 LCP1 (ENSBMSG00010016266) #22 CPB2 (ENSBMSG00010016357) #23 ENSBMSG00010016462 SIAH3 (ENSBMSG00010016505) #25 CBY2 (ENSBMSG00010016528) #26 COG3 (ENSBMSG00010016549) #27 SLC25A30 (ENSBMSG00010016571) #28 ENSBMSG00010016609 ##29 GTF2F2 (ENSBMSG00010016687) #30 KCTD4 (ENSBMSG00010016717) #31 ENSBMSG00010016736 ENSBMSG00010016755 #32 NUFIP1 (ENSBMSG00010016807) #33 TSC22D1 (ENSBMSG00010016870) #34 SERP2 (ENSBMSG00010016922) #35 SMIM2 (ENSBMSG00010016954) #36 Pecora ANCESTRAL SPECIES 23 ENSGT00940000159319 ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00440000033232.c.a.a ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864.f ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.a.a.a ##29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Percora_a ANCESTRAL SPECIES 25 ENSGT00940000159319 ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00440000033232.c.a.a ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864.f ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.a.a.a ##29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Bovidae ANCESTRAL SPECIES 25 ENSGT00940000159319 ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00440000033232.c.a.a ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864.f ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.a.a.a ##29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Caprinae ANCESTRAL SPECIES 37 ENSGT00940000157379 ENSGT00940000159853 ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063.a ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864.f ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.a.a.a ##29 ENSGT00390000016051.j #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 1 ENSOARG00020011095 ENSOARG00020011030 ENSOARG00020010995 RCBTB2 (ENSOARG00020010807) LPAR6 (ENSOARG00020010750) RB1 (ENSOARG00020009781) ITM2B (ENSOARG00020009664) MED4 (ENSOARG00020009593) ENSOARG00020009566 ENSOARG00020009436 HTR2A (ENSOARG00020009408) ENSOARG00020009357 LRCH1 (ENSOARG00020008711) RUBCNL (ENSOARG00020008494) #19 LRRC63 (ENSOARG00020008408) #21 ENSOARG00020008359 #22 CPB2 (ENSOARG00020008064) #23 ZC3H13 (ENSOARG00020007937) #24 CBY2 (ENSOARG00020007846) #26 ENSOARG00020007819 SLC25A30 (ENSOARG00020007017) #27 TPT1 (ENSOARG00020006843) ##29 KCTD4 (ENSOARG00020006798) #31 GTF2F2 (ENSOARG00020006761) #30 ENSOARG00020006616 #32 NUFIP1 (ENSOARG00020006417) #33 SERP2 (ENSOARG00020006397) #35 LACC1 (ENSOARG00020006292) #37 CCDC122 (ENSOARG00020006216) ENSOARG00020006192 ENOX1 (ENSOARG00020006161) Rambouillet Sheep MODERN SPECIES 205 ENSOARG00020016312 ENSOARG00020016292 ENSOARG00020016273 ENSOARG00020016254 ENSOARG00020016165 ENSOARG00020016157 ENSOARG00020016037 IL1RAPL1 (ENSOARG00020015893) ENSOARG00020015868 ENSOARG00020015791 ENSOARG00020015740 ENSOARG00020015703 ENSOARG00020015639 ENSOARG00020015619 ENSOARG00020015574 ENSOARG00020015550 #22 ENSOARG00020015491 ENSOARG00020015434 ENSOARG00020015397 ENSOARG00020015337 ENSOARG00020015280 ENSOARG00020015275 ENSOARG00020024326 ARX (ENSOARG00020024312) POLA1 (ENSOARG00020023737) PCYT1B (ENSOARG00020023537) PDK3 (ENSOARG00020023453) ENSOARG00020023420 ENSOARG00020023370 ZFX (ENSOARG00020023181) EIF2S3 (ENSOARG00020023139) Goat MODERN SPECIES 3 MLNR (ENSCHIG00000007989) FNDC3A (ENSCHIG00000016024) ENSCHIG00000006431 RCBTB2 (ENSCHIG00000012624) RB1 (ENSCHIG00000004374) LPAR6 (ENSCHIG00000019533) ITM2B (ENSCHIG00000012734) ENSCHIG00000017652 NUDT15 (ENSCHIG00000024171) SUCLA2 (ENSCHIG00000018699) HTR2A (ENSCHIG00000016921) ENSCHIG00000021306 LRCH1 (ENSCHIG00000012630) RUBCNL (ENSCHIG00000012197) #19 LRRC63 (ENSCHIG00000019710) #21 LCP1 (ENSCHIG00000007953) #22 CPB2 (ENSCHIG00000016819) #23 ZC3H13 (ENSCHIG00000020072) #24 SIAH3 (ENSCHIG00000022671) #25 CBY2 (ENSCHIG00000006466) #26 ENSCHIG00000022128 COG3 (ENSCHIG00000021605) #27 ENSCHIG00000012507 ENSCHIG00000013965 #28 ENSCHIG00000014215 ##29 GTF2F2 (ENSCHIG00000027081) #30 KCTD4 (ENSCHIG00000006271) #31 ENSCHIG00000017887 #32 NUFIP1 (ENSCHIG00000006835) #33 TSC22D1 (ENSCHIG00000012362) #34 SERP2 (ENSCHIG00000017254) #35 Bovinae ANCESTRAL SPECIES 20 ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00940000153244.B.z.c.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00440000033232.c.a.a ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864.f ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT01100000263828.a.b ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.a ##29 ENSGT00390000006051.a.a.a.a ##29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00390000017955.c.d.b ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 Bos ANCESTRAL SPECIES 22 ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00940000153244.B.z.c.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00440000033232.c.a.a ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864.f ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT01100000263828.a.b ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.a.a.b.a.a ##29 ENSGT00390000006051.a.a.a.a ##29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00390000017955.c.d.b ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 Bos_b ANCESTRAL SPECIES 4 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00940000153244.B.z.c.b ENSGT00950000183115.b.a ENSGT00950000183123.g.a.a.a ENSGT00390000012063 ENSGT00440000033232.c.a.a ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864.f ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT01100000263828.a.b ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.a.a.b.a.a ##29 ENSGT00390000006051.a.a.a.a ##29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00390000017955.c.d.b ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 Cow MODERN SPECIES 3 LPAR6 (ENSBTAG00000006645) RB1 (ENSBTAG00000006640) ENSBTAG00000003560 ITM2B (ENSBTAG00000003109) ENSBTAG00000024964 MED4 (ENSBTAG00000019502) ENSBTAG00000050479 NUDT15 (ENSBTAG00000019501) SUCLA2 (ENSBTAG00000006759) HTR2A (ENSBTAG00000013498) ESD (ENSBTAG00000003415) LRCH1 (ENSBTAG00000002959) RUBCNL (ENSBTAG00000013371) #19 LRRC63 (ENSBTAG00000015994) #21 ENSBTAG00000053178 LCP1 (ENSBTAG00000007079) #22 CPB2 (ENSBTAG00000007073) #23 ENSBTAG00000048402 ZC3H13 (ENSBTAG00000007067) SIAH3 (ENSBTAG00000051729) #25 CBY2 (ENSBTAG00000018580) #26 COG3 (ENSBTAG00000017907) #27 SLC25A30 (ENSBTAG00000016529) #28 TPT1 (ENSBTAG00000010156) ##29 KCTD4 (ENSBTAG00000019416) #31 GTF2F2 (ENSBTAG00000034495) #30 ENSBTAG00000045689 GPALPP1 (ENSBTAG00000009416) #32 NUFIP1 (ENSBTAG00000009415) #33 TSC22D1 (ENSBTAG00000046664) #34 TSC22D1 (ENSBTAG00000047739) Hybrid Bos Indicus MODERN SPECIES 3 RCBTB2 (ENSBIXG00005021378) LPAR6 (ENSBIXG00005021400) ENSBIXG00005021411 RB1 (ENSBIXG00005021439) ITM2B (ENSBIXG00005021532) ENSBIXG00005021562 MED4 (ENSBIXG00005000006) ENSBIXG00005021596 SUCLA2 (ENSBIXG00005021655) HTR2A (ENSBIXG00005021735) ESD (ENSBIXG00005003676) LRCH1 (ENSBIXG00005021912) RUBCNL (ENSBIXG00005006830) #19 LRRC63 (ENSBIXG00005022158) #21 ENSBIXG00005022169 LCP1 (ENSBIXG00005022212) #22 CPB2 (ENSBIXG00005022273) #23 ZC3H13 (ENSBIXG00005022307) #24 SIAH3 (ENSBIXG00005003804) #25 CBY2 (ENSBIXG00005022348) #26 ENSBIXG00005022372 COG3 (ENSBIXG00005022513) #27 ENSBIXG00005007690 ##29 KCTD4 (ENSBIXG00005003883) #31 GTF2F2 (ENSBIXG00005003886) #30 ENSBIXG00005022705 ENSBIXG00005022737 #32 NUFIP1 (ENSBIXG00005022767) #33 TSC22D1 (ENSBIXG00005022881) #34 ENSBIXG00005022931 #35 ENSBIXG00005023019 Bos_a ANCESTRAL SPECIES 55 ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00940000153244.B.z.c.b ENSGT00950000183115.b.a ENSGT00950000183123.g.a.a.a ENSGT00390000012063 ENSGT00440000033232.c.a.a ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864.f ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000016051.j #30 ENSGT00940000159552 #31 ENSGT00390000017955.c.d.b ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000014262 #36 ENSGT00390000000693 #37 Domestic yak MODERN SPECIES 6 RCBTB2 (ENSBGRG00000019788) RB1 (ENSBGRG00000020100) LPAR6 (ENSBGRG00000020489) ENSBGRG00000020504 ITM2B (ENSBGRG00000020531) ENSBGRG00000020600 MED4 (ENSBGRG00000020636) ENSBGRG00000020744 NUDT15 (ENSBGRG00000020753) SUCLA2 (ENSBGRG00000020790) HTR2A (ENSBGRG00000020868) ESD (ENSBGRG00000020909) LRCH1 (ENSBGRG00000020993) RUBCNL (ENSBGRG00000021526) #19 LRRC63 (ENSBGRG00000021956) #21 LCP1 (ENSBGRG00000022064) #22 ENSBGRG00000022330 ZC3H13 (ENSBGRG00000022439) #24 SIAH3 (ENSBGRG00000022492) #25 CBY2 (ENSBGRG00000022527) #26 COG3 (ENSBGRG00000022627) #27 SLC25A30 (ENSBGRG00000023058) #28 ENSBGRG00000023179 ENSBGRG00000023216 ##29 GTF2F2 (ENSBGRG00000003757) #30 KCTD4 (ENSBGRG00000003842) #31 ENSBGRG00000003862 ENSBGRG00000003939 #32 NUFIP1 (ENSBGRG00000004055) #33 ENSBGRG00000004099 TSC22D1 (ENSBGRG00000004147) #34 Wild yak MODERN SPECIES 840 HTR2A (ENSBMUG00000012992) ESD (ENSBMUG00000013017) LRCH1 (ENSBMUG00000013162) RUBCNL (ENSBMUG00000013349) #19 LRRC63 (ENSBMUG00000013390) #21 LCP1 (ENSBMUG00000013445) #22 ENSBMUG00000013466 CPB2 (ENSBMUG00000013516) #23 ZC3H13 (ENSBMUG00000013548) #24 SIAH3 (ENSBMUG00000013570) #25 CBY2 (ENSBMUG00000013573) #26 COG3 (ENSBMUG00000013643) #27 SLC25A30 (ENSBMUG00000013670) #28 ENSBMUG00000013681 ENSBMUG00000013706 ##29 GTF2F2 (ENSBMUG00000013736) #30 KCTD4 (ENSBMUG00000013740) #31 American bison MODERN SPECIES 3259 HTR2A (ENSBBBG00000000488) ESD (ENSBBBG00000000465) LRCH1 (ENSBBBG00000023203) RUBCNL (ENSBBBG00000023250) #19 LRRC63 (ENSBBBG00000023288) #21 ENSBBBG00000008966 LCP1 (ENSBBBG00000023329) #22 CPB2 (ENSBBBG00000023366) #23 ZC3H13 (ENSBBBG00000023395) #24 SIAH3 (ENSBBBG00000023409) #25 CBY2 (ENSBBBG00000023425) #26 COG3 (ENSBBBG00000006139) #27 ENSBBBG00000023504 ENSBBBG00000006147 #28 ENSBBBG00000023536 ##29 KCTD4 (ENSBBBG00000023540) #31 GTF2F2 (ENSBBBG00000006155) #30 ENSBBBG00000023577 GPALPP1 (ENSBBBG00000023609) NUFIP1 (ENSBBBG00000023623) #33 TSC22D1 (ENSBBBG00000023640) #34 SERP2 (ENSBBBG00000023651) #35 Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 18 FNDC3A (ENSMMSG00000013859) ENSMMSG00000013845 ENSMMSG00000013837 RCBTB2 (ENSMMSG00000013770) LPAR6 (ENSMMSG00000013747) RB1 (ENSMMSG00000013661) ITM2B (ENSMMSG00000013606) MED4 (ENSMMSG00000013569) ENSMMSG00000013552 SUCLA2 (ENSMMSG00000013529) HTR2A (ENSMMSG00000013507) ENSMMSG00000013450 LRCH1 (ENSMMSG00000013375) RUBCNL (ENSMMSG00000013269) #19 LRRC63 (ENSMMSG00000013232) #21 ENSMMSG00000013171 #22 CPB2 (ENSMMSG00000013091) #23 ZC3H13 (ENSMMSG00000013066) #24 SIAH3 (ENSMMSG00000013046) #25 CBY2 (ENSMMSG00000013010) #26 COG3 (ENSMMSG00000012900) #27 ENSMMSG00000012847 ##29 KCTD4 (ENSMMSG00000012832) #31 GTF2F2 (ENSMMSG00000012809) #30 ENSMMSG00000012733 #32 NUFIP1 (ENSMMSG00000012687) #33 TSC22D1 (ENSMMSG00000012637) #34 SERP2 (ENSMMSG00000012621) #35 SMIM2 (ENSMMSG00000020679) #36 LACC1 (ENSMMSG00000020655) #37 CCDC122 (ENSMMSG00000020615) Siberian musk deer MODERN SPECIES 241 C2orf74 (ENSMMSG00000009339) ENSMMSG00000009373 #22 LRRTM4 (ENSMMSG00000009411) Yarkand deer MODERN SPECIES 23 ENSCHYG00000025118 RCBTB2 (ENSCHYG00000024991) LPAR6 (ENSCHYG00000024973) RB1 (ENSCHYG00000024752) ITM2B (ENSCHYG00000024688) ENSCHYG00000024654 ENSCHYG00000024649 NUDT15 (ENSCHYG00000024631) ENSCHYG00000024543 ENSCHYG00000024533 HTR2A (ENSCHYG00000024474) ESD (ENSCHYG00000024416) LRCH1 (ENSCHYG00000023877) RUBCNL (ENSCHYG00000023615) #19 LRRC63 (ENSCHYG00000023437) #21 LCP1 (ENSCHYG00000023302) #22 CPB2 (ENSCHYG00000023124) #23 ZC3H13 (ENSCHYG00000022834) #24 SIAH3 (ENSCHYG00000022790) #25 CBY2 (ENSCHYG00000022728) #26 COG3 (ENSCHYG00000022568) #27 SLC25A30 (ENSCHYG00000022376) #28 ENSCHYG00000022199 ##29 ENSCHYG00000022164 KCTD4 (ENSCHYG00000022134) #31 GTF2F2 (ENSCHYG00000022073) #30 ENSCHYG00000021950 #32 NUFIP1 (ENSCHYG00000021831) #33 TSC22D1 (ENSCHYG00000021718) #34 SERP2 (ENSCHYG00000021664) #35 LACC1 (ENSCHYG00000021511) #37 Camelidae ANCESTRAL SPECIES 14 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.a.a.a ##29 ENSGT00390000016051.j #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 Arabian camel MODERN SPECIES 5 ENSCDRG00005005809 FNDC3A (ENSCDRG00005005830) CYSLTR2 (ENSCDRG00005006039) RCBTB2 (ENSCDRG00005006061) RB1 (ENSCDRG00005006166) LPAR6 (ENSCDRG00005006495) ITM2B (ENSCDRG00005006517) MED4 (ENSCDRG00005006678) NUDT15 (ENSCDRG00005006741) SUCLA2 (ENSCDRG00005006774) HTR2A (ENSCDRG00005006846) ESD (ENSCDRG00005006888) LRCH1 (ENSCDRG00005006972) RUBCNL (ENSCDRG00005007250) #19 LRRC63 (ENSCDRG00005007325) #21 LCP1 (ENSCDRG00005007408) #22 CPB2 (ENSCDRG00005007487) #23 ZC3H13 (ENSCDRG00005007587) #24 SIAH3 (ENSCDRG00005007643) #25 CBY2 (ENSCDRG00005007695) #26 COG3 (ENSCDRG00005007804) #27 SLC25A30 (ENSCDRG00005007895) #28 ENSCDRG00005007988 ##29 GTF2F2 (ENSCDRG00005008284) #30 KCTD4 (ENSCDRG00005008352) #31 ENSCDRG00005008379 #32 NUFIP1 (ENSCDRG00005008479) #33 TSC22D1 (ENSCDRG00005008565) #34 ENSCDRG00005008695 #35 LACC1 (ENSCDRG00005008895) #37 CCDC122 (ENSCDRG00005008954) Alpaca MODERN SPECIES 166 ENSVPAG00000005186 #19 ENSVPAG00000005185 #21 LCP1 (ENSVPAG00000005183) #22 CPB2 (ENSVPAG00000005181) #23 ZC3H13 (ENSVPAG00000005179) #24 Laurasiatheria_b ANCESTRAL SPECIES 21 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051.j #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Carnivora ANCESTRAL SPECIES 23 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051.j #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Caniformia ANCESTRAL SPECIES 24 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051.j #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B.gb #34 ENSGT00940000163647 ENSGT00940000159144.B.fb.b #34 Caniformia_b ANCESTRAL SPECIES 26 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000006051.a.a ##29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B.gb #34 ENSGT00940000163647 Ursidae ANCESTRAL SPECIES 27 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a.j ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b.t ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000006051.a.a ##29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B.gb #34 ENSGT00940000163647 ENSGT00940000159144.B.fb.b #34 Ursus ANCESTRAL SPECIES 62 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a.j ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b.t ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000006051.a.a ##29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B.gb #34 ENSGT00940000163647 ENSGT00390000000693 #37 American black bear MODERN SPECIES 5174 LRRC63 (ENSUAMG00000016577) #21 LCP1 (ENSUAMG00000016578) #22 CPB2 (ENSUAMG00000016580) #23 Polar bear MODERN SPECIES 297 CDADC1 (ENSUMAG00000018372) FNDC3A (ENSUMAG00000018363) CYSLTR2 (ENSUMAG00000018356) RCBTB2 (ENSUMAG00000018329) LPAR6 (ENSUMAG00000018323) RB1 (ENSUMAG00000018061) ITM2B (ENSUMAG00000017977) MED4 (ENSUMAG00000017955) NUDT15 (ENSUMAG00000017950) SUCLA2 (ENSUMAG00000017396) HTR2A (ENSUMAG00000017217) ESD (ENSUMAG00000017188) LRCH1 (ENSUMAG00000017098) RUBCNL (ENSUMAG00000017084) #19 LRRC63 (ENSUMAG00000017071) #21 LCP1 (ENSUMAG00000016365) #22 CPB2 (ENSUMAG00000016276) #23 ZC3H13 (ENSUMAG00000016220) #24 SIAH3 (ENSUMAG00000016203) #25 CBY2 (ENSUMAG00000016197) #26 COG3 (ENSUMAG00000016186) #27 SLC25A30 (ENSUMAG00000016178) #28 ENSUMAG00000016169 ##29 KCTD4 (ENSUMAG00000016155) #31 GTF2F2 (ENSUMAG00000016150) #30 ENSUMAG00000016139 ENSUMAG00000016137 #32 NUFIP1 (ENSUMAG00000016131) #33 TSC22D1 (ENSUMAG00000016120) #34 ENSUMAG00000016116 LACC1 (ENSUMAG00000016088) #37 Giant Panda MODERN SPECIES 17 MLNR (ENSAMEG00000003522) FNDC3A (ENSAMEG00000003537) CYSLTR2 (ENSAMEG00000018628) RCBTB2 (ENSAMEG00000003585) RB1 (ENSAMEG00000003640) LPAR6 (ENSAMEG00000018637) ITM2B (ENSAMEG00000003662) MED4 (ENSAMEG00000003718) ENSAMEG00000003735 SUCLA2 (ENSAMEG00000003745) HTR2A (ENSAMEG00000025689) ESD (ENSAMEG00000013377) LRCH1 (ENSAMEG00000013313) RUBCNL (ENSAMEG00000013284) #19 LRRC63 (ENSAMEG00000013282) #21 LCP1 (ENSAMEG00000013186) #22 CPB2 (ENSAMEG00000013144) #23 ZC3H13 (ENSAMEG00000013117) #24 SIAH3 (ENSAMEG00000013115) #25 CBY2 (ENSAMEG00000030920) #26 COG3 (ENSAMEG00000013072) #27 ENSAMEG00000026990 #28 ENSAMEG00000013022 #29 GTF2F2 (ENSAMEG00000013015) #30 KCTD4 (ENSAMEG00000018914) #31 ENSAMEG00000013001 #32 NUFIP1 (ENSAMEG00000012993) #33 TSC22D1 (ENSAMEG00000012987) #34 SERP2 (ENSAMEG00000026998) #35 LACC1 (ENSAMEG00000012983) #37 CCDC122 (ENSAMEG00000012979) Mustelinae ANCESTRAL SPECIES 71 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682.f #27 ENSGT00940000153655.A.a ENSGT00390000015682.e #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051.j #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B.gb #34 ENSGT00940000163647 Ferret MODERN SPECIES 232 RCBTB2 (ENSMPUG00000001418) RB1 (ENSMPUG00000001423) ITM2B (ENSMPUG00000001430) ENSMPUG00000001437 NUDT15 (ENSMPUG00000001487) SUCLA2 (ENSMPUG00000001488) HTR2A (ENSMPUG00000001493) ESD (ENSMPUG00000001494) LRCH1 (ENSMPUG00000001500) ENSMPUG00000001509 RUBCNL (ENSMPUG00000001511) #19 LRRC63 (ENSMPUG00000001576) #21 LCP1 (ENSMPUG00000001582) #22 CPB2 (ENSMPUG00000001590) #23 ZC3H13 (ENSMPUG00000001602) #24 SIAH3 (ENSMPUG00000001611) #25 CBY2 (ENSMPUG00000001615) #26 ENSMPUG00000001620 COG3 (ENSMPUG00000001626) #27 SLC25A30 (ENSMPUG00000001635) #28 TPT1 (ENSMPUG00000001640) #29 GTF2F2 (ENSMPUG00000001647) #30 KCTD4 (ENSMPUG00000019413) #31 ENSMPUG00000001655 #32 NUFIP1 (ENSMPUG00000001659) #33 ENSMPUG00000001666 TSC22D1 (ENSMPUG00000001669) #34 ENSMPUG00000001671 American mink MODERN SPECIES 309 5HT2A (ENSNVIG00000009229) ESD (ENSNVIG00000009198) LRCH1 (ENSNVIG00000009101) RUBCNL (ENSNVIG00000009009) #19 LRRC63 (ENSNVIG00000008979) #21 LCP1 (ENSNVIG00000007963) #22 CPB2 (ENSNVIG00000007809) #23 ZC3H13 (ENSNVIG00000007743) #24 SIAH3 (ENSNVIG00000007728) #25 CBY2 (ENSNVIG00000007706) #26 ENSNVIG00000007585 #27 Canidae ANCESTRAL SPECIES 38 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063.h ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B.gb #34 ENSGT00940000163647 ENSGT00940000159144.B.fb.b #34 Canis_lupus ANCESTRAL SPECIES 35 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063.h ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051.j.c #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B.gb #34 ENSGT00940000163647 ENSGT00940000159144.B.fb.b #34 Dingo MODERN SPECIES 7 ITM2B (ENSCAFG00020020009) ENSCAFG00020020001 NUDT15 (ENSCAFG00020019998) SUCLA2 (ENSCAFG00020019425) ENSCAFG00020019406 ENSCAFG00020019404 ENSCAFG00020019402 ENSCAFG00020019401 ENSCAFG00020019395 ENSCAFG00020019393 HTR2A (ENSCAFG00020019390) ESD (ENSCAFG00020019388) LRCH1 (ENSCAFG00020019384) RUBCNL (ENSCAFG00020019374) #19 LRRC63 (ENSCAFG00020019361) #21 LCP1 (ENSCAFG00020019359) #22 CPB2 (ENSCAFG00020019340) #23 ZC3H13 (ENSCAFG00020019269) #24 SIAH3 (ENSCAFG00020019260) #25 CBY2 (ENSCAFG00020019257) #26 COG3 (ENSCAFG00020018851) #27 SLC25A30 (ENSCAFG00020018818) #28 TPT1 (ENSCAFG00020018805) #29 KCTD4 (ENSCAFG00020018796) #31 ENSCAFG00020018789 #30 ENSCAFG00020018779 #32 NUFIP1 (ENSCAFG00020018778) #33 TSC22D1 (ENSCAFG00020018776) #34 ENSCAFG00020018774 SERP2 (ENSCAFG00020018773) #35 LACC1 (ENSCAFG00020018765) #37 Dog MODERN SPECIES 14 RB1 (ENSCAFG00845025645) ENSCAFG00845026699 ENSCAFG00845026714 ITM2B (ENSCAFG00845006529) MED4 (ENSCAFG00845006629) NUDT15 (ENSCAFG00845006770) SUCLA2 (ENSCAFG00845006827) ENSCAFG00845006932 ENSCAFG00845006950 ENSCAFG00845006976 HTR2A (ENSCAFG00845007028) ESD (ENSCAFG00845007071) LRCH1 (ENSCAFG00845007392) RUBCNL (ENSCAFG00845007831) #19 LRRC63 (ENSCAFG00845008059) #21 LCP1 (ENSCAFG00845008232) #22 ENSCAFG00845008378 CPB2 (ENSCAFG00845008419) #23 ZC3H13 (ENSCAFG00845008518) #24 SIAH3 (ENSCAFG00845008706) #25 CBY2 (ENSCAFG00845008753) #26 ERICH6B (ENSCAFG00845008814) COG3 (ENSCAFG00845008880) #27 ENSCAFG00845009121 #28 TPT1 (ENSCAFG00845009258) #29 GTF2F2 (ENSCAFG00845009386) #30 KCTD4 (ENSCAFG00845009422) #31 ENSCAFG00845009469 #32 NUFIP1 (ENSCAFG00845009615) #33 TSC22D1 (ENSCAFG00845009733) #34 SERP2 (ENSCAFG00845009825) #35 Red fox MODERN SPECIES 133 RCBTB2 (ENSVVUG00000028249) RB1 (ENSVVUG00000028308) LPAR6 (ENSVVUG00000028313) ITM2B (ENSVVUG00000028315) MED4 (ENSVVUG00000028319) NUDT15 (ENSVVUG00000028320) SUCLA2 (ENSVVUG00000028321) ENSVVUG00000028325 ENSVVUG00000028335 HTR2A (ENSVVUG00000028338) ESD (ENSVVUG00000028341) LRCH1 (ENSVVUG00000028344) ENSVVUG00000028357 RUBCNL (ENSVVUG00000028362) #19 LRRC63 (ENSVVUG00000028383) #21 LCP1 (ENSVVUG00000028385) #22 CPB2 (ENSVVUG00000028393) #23 ZC3H13 (ENSVVUG00000028395) #24 SIAH3 (ENSVVUG00000028402) #25 CBY2 (ENSVVUG00000028403) #26 ENSVVUG00000028408 COG3 (ENSVVUG00000028413) #27 SLC25A30 (ENSVVUG00000028417) #28 TPT1 (ENSVVUG00000028420) #29 GTF2F2 (ENSVVUG00000028424) #30 KCTD4 (ENSVVUG00000028428) #31 GPALPP1 (ENSVVUG00000028432) #32 NUFIP1 (ENSVVUG00000028438) #33 TSC22D1 (ENSVVUG00000028447) #34 TSC22D1 (ENSVVUG00000028449) ENSVVUG00000028452 Felidae ANCESTRAL SPECIES 23 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b.q ENSGT01050000244937.a.a ENSGT00390000011864.h ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00390000016988.a.a.a.b.a.b.a.a ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 Panthera ANCESTRAL SPECIES 21 ENSGT00940000153676.b ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b.q ENSGT01050000244937.a.a ENSGT00390000011864.h ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00390000016988.a.a.a.b.a.b.a.a ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 Panthera_a ANCESTRAL SPECIES 23 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b.q ENSGT01050000244937.a.a ENSGT00390000011864.h ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00390000016988.a.a.a.b.a.b.a.a ENSGT00940000159144.B #34 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 lion MODERN SPECIES 1 CAB39L (ENSPLOG00000017703) CYSLTR2 (ENSPLOG00000017683) RCBTB2 (ENSPLOG00000017385) LPAR6 (ENSPLOG00000017343) RB1 (ENSPLOG00000016968) ITM2B (ENSPLOG00000016805) MED4 (ENSPLOG00000016692) NUDT15 (ENSPLOG00000016667) SUCLA2 (ENSPLOG00000016595) ENSPLOG00000016567 HTR2A (ENSPLOG00000016485) ESD (ENSPLOG00000016426) LRCH1 (ENSPLOG00000016048) RUBCNL (ENSPLOG00000015905) #19 LRRC63 (ENSPLOG00000015806) #21 LCP1 (ENSPLOG00000015767) #22 CPB2 (ENSPLOG00000015574) #23 ZC3H13 (ENSPLOG00000015430) #24 SIAH3 (ENSPLOG00000015354) #25 CBY2 (ENSPLOG00000015298) #26 COG3 (ENSPLOG00000015229) #27 SLC25A30 (ENSPLOG00000015133) #28 TPT1 (ENSPLOG00000014878) #29 KCTD4 (ENSPLOG00000014817) #31 ENSPLOG00000014787 #30 GPALPP1 (ENSPLOG00000014632) NUFIP1 (ENSPLOG00000014594) #33 ENSPLOG00000014565 TSC22D1 (ENSPLOG00000014492) #34 SERP2 (ENSPLOG00000014453) #35 LACC1 (ENSPLOG00000014380) #37 leopard MODERN SPECIES 14 CDADC1 (ENSPPRG00000001969) MLNR (ENSPPRG00000002089) FNDC3A (ENSPPRG00000003779) RCBTB2 (ENSPPRG00000005884) RB1 (ENSPPRG00000008573) ITM2B (ENSPPRG00000009808) MED4 (ENSPPRG00000009988) NUDT15 (ENSPPRG00000010318) ENSPPRG00000011389 ENSPPRG00000011431 HTR2A (ENSPPRG00000011866) ENSPPRG00000012285 LRCH1 (ENSPPRG00000015849) RUBCNL (ENSPPRG00000000386) #19 LRRC63 (ENSPPRG00000001903) #21 LCP1 (ENSPPRG00000003176) #22 CPB2 (ENSPPRG00000003962) #23 ZC3H13 (ENSPPRG00000005440) #24 SIAH3 (ENSPPRG00000005707) #25 CBY2 (ENSPPRG00000006138) #26 COG3 (ENSPPRG00000006884) #27 ENSPPRG00000007684 SLC25A30 (ENSPPRG00000007929) #28 TPT1 (ENSPPRG00000009372) #29 KCTD4 (ENSPPRG00000016150) #31 GTF2F2 (ENSPPRG00000009586) #30 GPALPP1 (ENSPPRG00000011209) NUFIP1 (ENSPPRG00000012625) #33 ENSPPRG00000012925 TSC22D1 (ENSPPRG00000015050) #34 SERP2 (ENSPPRG00000013094) #35 Tiger MODERN SPECIES 221 FNDC3A (ENSPTIG00000018433) RCBTB2 (ENSPTIG00000013056) RB1 (ENSPTIG00000009545) ITM2B (ENSPTIG00000007400) MED4 (ENSPTIG00000006671) NUDT15 (ENSPTIG00000006093) SUCLA2 (ENSPTIG00000020513) ENSPTIG00000019974 HTR2A (ENSPTIG00000019137) ESD (ENSPTIG00000017319) LRCH1 (ENSPTIG00000015667) RUBCNL (ENSPTIG00000008805) #19 LRRC63 (ENSPTIG00000005072) #21 LCP1 (ENSPTIG00000019435) #22 CPB2 (ENSPTIG00000018397) #23 ZC3H13 (ENSPTIG00000014867) #24 SIAH3 (ENSPTIG00000014752) #25 CBY2 (ENSPTIG00000013046) #26 COG3 (ENSPTIG00000010467) #27 SLC25A30 (ENSPTIG00000009381) #28 TPT1 (ENSPTIG00000006407) #29 KCTD4 (ENSPTIG00000006409) #31 ENSPTIG00000005441 #30 GPALPP1 (ENSPTIG00000020901) NUFIP1 (ENSPTIG00000020246) #33 ENSPTIG00000019578 ENSPTIG00000019134 ENSPTIG00000018215 SERP2 (ENSPTIG00000017877) #35 Cat MODERN SPECIES FNDC3A (ENSFCAG00000030680) CYSLTR2 (ENSFCAG00000040666) RCBTB2 (ENSFCAG00000006999) RB1 (ENSFCAG00000024529) LPAR6 (ENSFCAG00000006998) ITM2B (ENSFCAG00000039896) MED4 (ENSFCAG00000015321) NUDT15 (ENSFCAG00000035004) SUCLA2 (ENSFCAG00000031559) ENSFCAG00000026862 HTR2A (ENSFCAG00000036489) ESD (ENSFCAG00000026826) LRCH1 (ENSFCAG00000034620) RUBCNL (ENSFCAG00000010241) #19 LRRC63 (ENSFCAG00000009184) #21 LCP1 (ENSFCAG00000009182) #22 CPB2 (ENSFCAG00000009181) #23 ZC3H13 (ENSFCAG00000004877) #24 SIAH3 (ENSFCAG00000018417) #25 CBY2 (ENSFCAG00000040111) #26 ENSFCAG00000046561 COG3 (ENSFCAG00000004869) #27 SLC25A30 (ENSFCAG00000027568) #28 TPT1 (ENSFCAG00000002107) #29 GTF2F2 (ENSFCAG00000002105) #30 KCTD4 (ENSFCAG00000002106) #31 GPALPP1 (ENSFCAG00000027174) NUFIP1 (ENSFCAG00000013715) #33 ENSFCAG00000028134 TSC22D1 (ENSFCAG00000025840) #34 SERP2 (ENSFCAG00000044942) #35 Laurasiatheria_c ANCESTRAL SPECIES 22 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051.j #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Equus ANCESTRAL SPECIES 26 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864.k ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00940000159552 #31 ENSGT00390000016051.j #30 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 ENSGT00940000163647 ENSGT00940000162467.b #35 Donkey MODERN SPECIES 2 CETN3 (ENSEASG00005019651) MEF2C (ENSEASG00005019654) TMEM161B (ENSEASG00005019662) CCNH (ENSEASG00005019665) ENSEASG00005019674 ENSEASG00005025821 ENSEASG00005023790 ENSEASG00005017159 NUDT15 (ENSEASG00005017157) SUCLA2 (ENSEASG00005017152) HTR2A (ENSEASG00005017150) ENSEASG00005017144 LRCH1 (ENSEASG00005017132) RUBCNL (ENSEASG00005017123) #19 LRRC63 (ENSEASG00005034276) #21 LCP1 (ENSEASG00005017115) #22 CPB2 (ENSEASG00005017110) #23 ZC3H13 (ENSEASG00005017100) #24 SIAH3 (ENSEASG00005024437) #25 CBY2 (ENSEASG00005017097) #26 ENSEASG00005029663 COG3 (ENSEASG00005017090) #27 ENSEASG00005017085 #28 TPT1 (ENSEASG00005017078) #29 KCTD4 (ENSEASG00005028559) #31 GTF2F2 (ENSEASG00005017062) #30 ENSEASG00005017051 #32 NUFIP1 (ENSEASG00005017043) #33 TSC22D1 (ENSEASG00005017037) #34 ENSEASG00005031806 SERP2 (ENSEASG00005017029) #35 Horse MODERN SPECIES 8 FNDC3A (ENSECAG00000023697) ENSECAG00000054403 CYSLTR2 (ENSECAG00000004678) RCBTB2 (ENSECAG00000022606) RB1 (ENSECAG00000014575) LPAR6 (ENSECAG00000004913) ITM2B (ENSECAG00000013050) MED4 (ENSECAG00000024240) NUDT15 (ENSECAG00000010019) SUCLA2 (ENSECAG00000011122) HTR2A (ENSECAG00000024282) ESD (ENSECAG00000024350) LRCH1 (ENSECAG00000024376) RUBCNL (ENSECAG00000016721) #19 LRRC63 (ENSECAG00000021952) #21 LCP1 (ENSECAG00000023009) #22 CPB2 (ENSECAG00000017329) #23 ZC3H13 (ENSECAG00000022843) #24 SIAH3 (ENSECAG00000025105) #25 CBY2 (ENSECAG00000000488) #26 ENSECAG00000033930 COG3 (ENSECAG00000003080) #27 SLC25A30 (ENSECAG00000017334) #28 TPT1 (ENSECAG00000018348) #29 GTF2F2 (ENSECAG00000021923) #30 KCTD4 (ENSECAG00000005117) #31 GPALPP1 (ENSECAG00000009110) #32 NUFIP1 (ENSECAG00000013295) #33 TSC22D1 (ENSECAG00000005195) #34 ENSECAG00000060045 ENSECAG00000040040 #35 Chiroptera ANCESTRAL SPECIES 65 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 Microchiroptera ANCESTRAL SPECIES 58 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 Microbat MODERN SPECIES 944 ENSMLUG00000026436 RFC3 (ENSMLUG00000014088) STARD13 (ENSMLUG00000013413) KL (ENSMLUG00000013403) ENSMLUG00000023720 PDS5B (ENSMLUG00000013759) SGCG (ENSMLUG00000006305) SACS (ENSMLUG00000011827) TNFRSF19 (ENSMLUG00000005730) MIPEP (ENSMLUG00000001287) HTR2A (ENSMLUG00000007661) ESD (ENSMLUG00000028466) LRCH1 (ENSMLUG00000012524) RUBCNL (ENSMLUG00000007642) #19 ENSMLUG00000009728 #21 LCP1 (ENSMLUG00000014393) #22 CPB2 (ENSMLUG00000006959) #23 ZC3H13 (ENSMLUG00000006920) #24 ENSMLUG00000009265 COG6 (ENSMLUG00000015423) ENSMLUG00000007752 ENSMLUG00000023120 ENSMLUG00000014595 ENSMLUG00000024202 MRPS31 (ENSMLUG00000008416) SLC25A15 (ENSMLUG00000008471) ENSMLUG00000029270 ENSMLUG00000027304 ENSMLUG00000022837 ##29 THSD1 (ENSMLUG00000003833) VPS36 (ENSMLUG00000000128) Greater horseshoe bat MODERN SPECIES 22 ENSRFEG00010000603 CYSLTR2 (ENSRFEG00010000615) RCBTB2 (ENSRFEG00010000664) RB1 (ENSRFEG00010000766) LPAR6 (ENSRFEG00010000857) ITM2B (ENSRFEG00010000875) ENSRFEG00010000895 MED4 (ENSRFEG00010000908) NUDT15 (ENSRFEG00010000941) SUCLA2 (ENSRFEG00010000964) HTR2A (ENSRFEG00010001008) ENSRFEG00010001044 LRCH1 (ENSRFEG00010001090) RUBCNL (ENSRFEG00010001205) #19 LRRC63 (ENSRFEG00010001264) #21 LCP1 (ENSRFEG00010001294) #22 CPB2 (ENSRFEG00010001341) #23 ENSRFEG00010001386 NHLRC3 (ENSRFEG00010001424) PROSER1 (ENSRFEG00010001494) STOML3 (ENSRFEG00010001548) ENSRFEG00010001582 FREM2 (ENSRFEG00010001609) UFM1 (ENSRFEG00010001672) TRPC4 (ENSRFEG00010001740) POSTN (ENSRFEG00010001863) ENSRFEG00010002000 SUPT20H (ENSRFEG00010002062) EXOSC8 (ENSRFEG00010002172) ALG5 (ENSRFEG00010002210) SMAD9 (ENSRFEG00010002255) Megabat MODERN SPECIES 296 LRRC63 (ENSPVAG00000012363) #21 LCP1 (ENSPVAG00000012358) #22 CPB2 (ENSPVAG00000012355) #23 ZC3H13 (ENSPVAG00000012353) #24 Eulipotyphla ANCESTRAL SPECIES ENSGT00950000183097.a.a.b #22 Hedgehog MODERN SPECIES 3338 LCP1 (ENSEEUG00000005600) #22 Common shrew MODERN SPECIES 2494 LCP1 (ENSSARG00000004027) #22 Atlantogenata ANCESTRAL SPECIES 27 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT01030000235083 ENSGT00940000165996 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.a.b #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00940000163575 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 Xenarthra ANCESTRAL SPECIES 877 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 Sloth MODERN SPECIES 2903 LCP1 (ENSCHOG00000012037) #22 Armadillo MODERN SPECIES 3397 LRCH1 (ENSDNOG00000037276) ENSDNOG00000036839 RUBCNL (ENSDNOG00000012748) #19 ENSDNOG00000042434 #21 LCP1 (ENSDNOG00000045424) #22 CPB2 (ENSDNOG00000000021) #23 ZC3H13 (ENSDNOG00000005390) #24 Afrotheria ANCESTRAL SPECIES 54 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT01030000235083 ENSGT00940000165996 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b ##29 ENSGT00940000159552 #31 ENSGT00390000016051 #30 ENSGT00940000163575 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 Afrotheria_a ANCESTRAL SPECIES 52 ENSGT01100000263484.C.a ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00710000106860 #21 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT01030000235083 ENSGT00940000165996 ENSGT00940000153137.a.b.b.a #26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051.a.b.b ##29 ENSGT00940000159552 #31 ENSGT00390000016051 #30 ENSGT00940000163575 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000159144.B #34 Elephant MODERN SPECIES 239 FNDC3A (ENSLAFG00000016935) CYSLTR2 (ENSLAFG00000011232) RCBTB2 (ENSLAFG00000015596) LPAR6 (ENSLAFG00000031818) RB1 (ENSLAFG00000013579) ITM2B (ENSLAFG00000004943) MED4 (ENSLAFG00000000347) NUDT15 (ENSLAFG00000017248) ENSLAFG00000027647 SUCLA2 (ENSLAFG00000009678) HTR2A (ENSLAFG00000015014) ESD (ENSLAFG00000006901) LRCH1 (ENSLAFG00000006893) RUBCNL (ENSLAFG00000014959) #19 LRRC63 (ENSLAFG00000011144) #21 LCP1 (ENSLAFG00000009574) #22 CPB2 (ENSLAFG00000016759) #23 ENSLAFG00000016747 ENSLAFG00000026189 CBY2 (ENSLAFG00000011325) #26 ENSLAFG00000010158 COG3 (ENSLAFG00000021400) #27 SLC25A30 (ENSLAFG00000001502) #28 ENSLAFG00000021740 ##29 KCTD4 (ENSLAFG00000009328) #31 GTF2F2 (ENSLAFG00000009325) #30 GPALPP1 (ENSLAFG00000013763) NUFIP1 (ENSLAFG00000013760) #33 TSC22D1 (ENSLAFG00000014574) #34 SERP2 (ENSLAFG00000000162) #35 LACC1 (ENSLAFG00000016028) #37 Hyrax MODERN SPECIES 2616 LCP1 (ENSPCAG00000005700) #22 Tenrec MODERN SPECIES 3213 LCP1 (ENSETEG00000007529) #22 Marsupialia ANCESTRAL SPECIES 5 ENSGT00940000159319 ENSGT00970000197615 ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173288 ENSGT00950000183097.a.a.b #22 Marsupialia_b ANCESTRAL SPECIES 20 ENSGT00970000197615 ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173288 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT01030000234598.b.a.b.k.a ENSGT00940000159621 ENSGT00940000155336 ENSGT01030000234595.A.a ENSGT00940000155787 ENSGT00940000157301.b ENSGT00390000000303 ENSGT00940000157141 ENSGT00390000000155.a.a ENSGT00950000183134.c.a.a ENSGT00390000011985 ENSGT00390000004056 ENSGT00510000047334 ENSGT00950000183068.a.b ENSGT00390000013087 Diprotodontia ANCESTRAL SPECIES 24 ENSGT00990000203619.B ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173288 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT01030000234598.b.a.b.k.a ENSGT00940000159621 ENSGT00940000155336 ENSGT01030000234595.A.a ENSGT00940000155787 ENSGT00940000157301.b ENSGT00390000000303 ENSGT00940000157141 ENSGT00390000000155.a.a ENSGT00950000183134.c.a.a ENSGT00390000011985 ENSGT00390000004056 ENSGT00510000047334 ENSGT00950000183068.a.b ENSGT00390000013087 Diprotodontia_a ANCESTRAL SPECIES 25 ENSGT00990000203619.B ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173288 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT01030000234598.b.a.b.k.a ENSGT00940000159621 ENSGT00940000155336 ENSGT01030000234595.A.a ENSGT00940000155787 ENSGT00940000157301.b ENSGT00390000000303 ENSGT00940000157141 ENSGT00390000000155.a.a ENSGT00950000183134.c.a.a ENSGT00390000011985 ENSGT00390000004056 ENSGT00510000047334 ENSGT00950000183068.a.b ENSGT00390000013087 koala MODERN SPECIES 53 RCBTB2 (ENSPCIG00000029309) LPAR6 (ENSPCIG00000029308) RB1 (ENSPCIG00000029307) ITM2B (ENSPCIG00000029306) ENSPCIG00000029305 MED4 (ENSPCIG00000029302) NUDT15 (ENSPCIG00000029301) ZCRB1 (ENSPCIG00000029300) SUCLA2 (ENSPCIG00000016781) HTR2A (ENSPCIG00000006885) ESD (ENSPCIG00000006890) LRCH1 (ENSPCIG00000006904) ENSPCIG00000007025 #19 ENSPCIG00000007027 ENSPCIG00000007026 LCP1 (ENSPCIG00000007028) #22 ENSPCIG00000007029 ENSPCIG00000015183 FOLH1 (ENSPCIG00000018760) NOX4 (ENSPCIG00000011154) TYR (ENSPCIG00000024368) ENSPCIG00000024370 GRM5 (ENSPCIG00000024373) CTSC (ENSPCIG00000024375) RAB38 (ENSPCIG00000002044) TMEM135 (ENSPCIG00000027278) FZD4 (ENSPCIG00000018913) PRSS23 (ENSPCIG00000018910) ENSPCIG00000018908 ENSPCIG00000036562 ENSPCIG00000018899 Common wonbat MODERN SPECIES 342 ENSVURG00010023449 RCBTB2 (ENSVURG00010023456) RB1 (ENSVURG00010023466) LPAR6 (ENSVURG00010023472) ITM2B (ENSVURG00010023473) ENSVURG00010023475 MED4 (ENSVURG00010023479) NUDT15 (ENSVURG00010023481) SUCLA2 (ENSVURG00010023483) ENSVURG00010023489 HTR2A (ENSVURG00010023492) ENSVURG00010023498 LRCH1 (ENSVURG00010023509) RUBCNL (ENSVURG00010023522) #19 ENSVURG00010023527 LCP1 (ENSVURG00010023528) #22 ENSVURG00010000640 NOX4 (ENSVURG00010005832) TYR (ENSVURG00010005865) CTSC (ENSVURG00010005899) ENSVURG00010005908 TMEM135 (ENSVURG00010005930) FZD4 (ENSVURG00010005964) PRSS23 (ENSVURG00010005981) ME3 (ENSVURG00010006020) CCDC81 (ENSVURG00010006061) ENSVURG00010006106 ENSVURG00010006114 EED (ENSVURG00010006129) PICALM (ENSVURG00010006226) ENSVURG00010006353 Wallaby MODERN SPECIES 4242 LCP1 (ENSMEUG00000000165) #22 Tasmanian devil MODERN SPECIES 2 ENSSHAG00000023617 ENSSHAG00000012802 RCBTB2 (ENSSHAG00000013842) LPAR6 (ENSSHAG00000027480) RB1 (ENSSHAG00000014024) ITM2B (ENSSHAG00000014885) ENSSHAG00000005331 MED4 (ENSSHAG00000005253) NUDT15 (ENSSHAG00000022268) SUCLA2 (ENSSHAG00000006415) HTR2A (ENSSHAG00000008685) ESD (ENSSHAG00000024732) LRCH1 (ENSSHAG00000009981) ENSSHAG00000012182 #19 ENSSHAG00000030777 ENSSHAG00000013328 #22 ENSSHAG00000031322 ENSSHAG00000002301 ENSSHAG00000002531 ENSSHAG00000004938 TYR (ENSSHAG00000003407) GRM5 (ENSSHAG00000005876) CTSC (ENSSHAG00000021775) RAB38 (ENSSHAG00000001883) TMEM135 (ENSSHAG00000005028) FZD4 (ENSSHAG00000009486) PRSS23 (ENSSHAG00000010219) ME3 (ENSSHAG00000011265) CCDC81 (ENSSHAG00000012907) ENSSHAG00000013345 EED (ENSSHAG00000013554) Opossum MODERN SPECIES 3 RCBTB2 (ENSMODG00000011140) RB1 (ENSMODG00000011168) LPAR6 (ENSMODG00000011179) ENSMODG00000011189 ENSMODG00000051554 MED4 (ENSMODG00000011210) ENSMODG00000011215 NUDT15 (ENSMODG00000039008) ENSMODG00000029176 SUCLA2 (ENSMODG00000011236) HTR2A (ENSMODG00000011274) ESD (ENSMODG00000011290) LRCH1 (ENSMODG00000011348) ENSMODG00000029107 ENSMODG00000011358 #19 LCP1 (ENSMODG00000011413) #22 ENSMODG00000028786 ENSMODG00000024094 ENSMODG00000035809 TMEM135 (ENSMODG00000004087) ENSMODG00000024072 FZD4 (ENSMODG00000004102) PRSS23 (ENSMODG00000041673) ME3 (ENSMODG00000004158) CCDC81 (ENSMODG00000004183) HIKESHI (ENSMODG00000039483) EED (ENSMODG00000004253) PICALM (ENSMODG00000004297) CCDC83 (ENSMODG00000004311) ENSMODG00000048166 ENSMODG00000004359 Platypus MODERN SPECIES 12 CAB39L (ENSOANG00000022493) CDADC1 (ENSOANG00000015548) MLNR (ENSOANG00000050133) FNDC3A (ENSOANG00000015550) CYSLTR2 (ENSOANG00000015552) RCBTB2 (ENSOANG00000015554) RB1 (ENSOANG00000015555) LPAR6 (ENSOANG00000043938) MED4 (ENSOANG00000045146) ITM2B (ENSOANG00000015558) NUDT15 (ENSOANG00000051200) SUCLA2 (ENSOANG00000015563) ESD (ENSOANG00000015566) LRCH1 (ENSOANG00000015567) RUBCNL (ENSOANG00000015572) #19 LCP1 (ENSOANG00000015575) #22 CPB2 (ENSOANG00000015578) #23 ZC3H13 (ENSOANG00000015580) #24 SIAH3 (ENSOANG00000051226) #25 ENSOANG00000028229 SLC25A30 (ENSOANG00000015582) #27 TPT1 (ENSOANG00000047981) #29 GTF2F2 (ENSOANG00000022461) #30 KCTD4 (ENSOANG00000015587) #31 ENSOANG00000049076 #33 TSC22D1 (ENSOANG00000036903) #34 LACC1 (ENSOANG00000015595) #37 LIG4 (ENSOANG00000015936) ABHD13 (ENSOANG00000015937) TNFSF13B (ENSOANG00000015596) MYO16 (ENSOANG00000015599) Sauria ANCESTRAL SPECIES 2 ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT01040000240539 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 Archelosauria ANCESTRAL SPECIES ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT01040000240539 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.b ##26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00940000163575 ENSGT00390000003758 #33 Archosauria ANCESTRAL SPECIES 2 ENSGT01100000263484.C.a.l ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.b ##26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00940000163647 ENSGT00940000162467.b #35 Aves ANCESTRAL SPECIES ENSGT01100000263484.C.a.l ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.b ##26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00940000163647 ENSGT00390000000693 #37 Neognathae ANCESTRAL SPECIES 1 ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT00990000211105 ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.b ##26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00940000163647 ENSGT00390000000693 #37 Galloanserae ANCESTRAL SPECIES 1 ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT00990000211105 ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.b ##26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00940000163647 ENSGT00390000000693 #37 Anatidae ANCESTRAL SPECIES 16 ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT00950000183202.b ENSGT01040000240444.A.a.a.a.a ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT00990000211105 ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.b ##26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00390000000693 #37 ENSGT00390000005130 Duck MODERN SPECIES ENSAPLG00000029898 CYSLTR2 (ENSAPLG00000001160) RCBTB2 (ENSAPLG00000007415) RB1 (ENSAPLG00000007734) LPAR6 (ENSAPLG00000000875) ITM2B (ENSAPLG00000008210) MED4 (ENSAPLG00000008395) NUDT15 (ENSAPLG00000021981) SUCLA2 (ENSAPLG00000008417) ENSAPLG00000023867 HTR2A (ENSAPLG00000011672) ESD (ENSAPLG00000014654) LRCH1 (ENSAPLG00000014780) RUBCNL (ENSAPLG00000015418) #19 ENSAPLG00000020396 LCP1 (ENSAPLG00000000904) #22 CPB2 (ENSAPLG00000002595) #23 ZC3H13 (ENSAPLG00000002707) #24 SIAH3 (ENSAPLG00000020494) #25 ENSAPLG00000000777 ##26 ENSAPLG00000027871 COG3 (ENSAPLG00000010918) #27 SLC25A30 (ENSAPLG00000011120) #28 TPT1 (ENSAPLG00000004672) #29 GTF2F2 (ENSAPLG00000004535) #30 ENSAPLG00000004532 GPALPP1 (ENSAPLG00000004496) NUFIP1 (ENSAPLG00000004973) #33 ENSAPLG00000021916 ENSAPLG00000020430 LACC1 (ENSAPLG00000005165) #37 Pink-footed goose MODERN SPECIES 88 CDADC1 (ENSABRG00000005856) MLNR (ENSABRG00000005864) FNDC3A (ENSABRG00000005875) CYSLTR2 (ENSABRG00000005903) RCBTB2 (ENSABRG00000005909) RB1 (ENSABRG00000005918) LPAR6 (ENSABRG00000005948) ITM2B (ENSABRG00000005957) MED4 (ENSABRG00000005968) NUDT15 (ENSABRG00000005976) SUCLA2 (ENSABRG00000005994) HTR2A (ENSABRG00000006015) ESD (ENSABRG00000006025) LRCH1 (ENSABRG00000006051) RUBCNL (ENSABRG00000006110) #19 LCP1 (ENSABRG00000006152) #22 CPB2 (ENSABRG00000006161) #23 ZC3H13 (ENSABRG00000006184) #24 SIAH3 (ENSABRG00000006210) #25 ENSABRG00000006220 ##26 ENSABRG00000006227 COG3 (ENSABRG00000006247) #27 SLC25A30 (ENSABRG00000006269) #28 TPT1 (ENSABRG00000006304) #29 GTF2F2 (ENSABRG00000006341) #30 KCTD4 (ENSABRG00000006351) #31 ENSABRG00000006363 ENSABRG00000006373 #32 ENSABRG00000006388 #33 Phasianidae ANCESTRAL SPECIES ENSGT01100000263484.C.a.l ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.b ##26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00940000163647 ENSGT00390000000693 #37 Phasianidae_b ANCESTRAL SPECIES ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173288 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.b ##26 ENSGT00940000169379 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00940000159552 #31 ENSGT00390000016051 #30 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00940000163647 ENSGT00390000000693 #37 Chicken MODERN SPECIES MLNR (ENSGALG00010003995) FNDC3A (ENSGALG00010003986) CYSLTR2 (ENSGALG00010003958) RCBTB2 (ENSGALG00010003929) LPAR6 (ENSGALG00010003920) RB1 (ENSGALG00010003900) ITM2B (ENSGALG00010003889) MED4 (ENSGALG00010003870) NUDT15 (ENSGALG00010003861) SUCLA2 (ENSGALG00010003858) HTR2A (ENSGALG00010004769) ESD (ENSGALG00010003848) LRCH1 (ENSGALG00010003843) RUBCNL (ENSGALG00010003821) #19 ENSGALG00010003809 LCP1 (ENSGALG00010003795) #22 CPB2 (ENSGALG00010003750) #23 ZC3H13 (ENSGALG00010003734) #24 SIAH3 (ENSGALG00010003718) #25 SPERT (ENSGALG00010003713) COG3 (ENSGALG00010003617) #27 SLC25A30 (ENSGALG00010003589) #28 TPT1 (ENSGALG00010003558) #29 KCTD4 (ENSGALG00010003519) #31 GTF2F2 (ENSGALG00010003517) #30 GPALPP1 (ENSGALG00010003509) NUFIP1 (ENSGALG00010003503) #33 ENSGALG00010003495 ENSGALG00010004728 TSC22D1 (ENSGALG00010003466) CCDC122 (ENSGALG00010003461) Turkey MODERN SPECIES ENSMGAG00000014986 ENSMGAG00000014987 #33 ENSMGAG00000014988 GTF2F2 (ENSMGAG00000020273) #30 ENSMGAG00000014990 #29 ENSMGAG00000014989 #30 ENSMGAG00000015561 #31 ENSMGAG00000014991 #28 ENSMGAG00000014992 #27 ENSMGAG00000014993 ENSMGAG00000014995 #25 ENSMGAG00000016700 ##26 ENSMGAG00000014996 #24 ENSMGAG00000014997 #23 ENSMGAG00000014999 ENSMGAG00000014998 #22 ENSMGAG00000015000 #19 ENSMGAG00000015023 ENSMGAG00000015003 ENSMGAG00000015002 ENSMGAG00000019843 ENSMGAG00000018600 SUCLA2 (ENSMGAG00000015004) ENSMGAG00000015006 ENSMGAG00000021154 ITM2B (ENSMGAG00000015007) ENSMGAG00000021179 ENSMGAG00000015009 ENSMGAG00000015008 RCBTB2 (ENSMGAG00000015010) ENSMGAG00000020468 Japanese quail MODERN SPECIES FNDC3A (ENSCJPG00005019783) CYSLTR2 (ENSCJPG00005019781) RCBTB2 (ENSCJPG00005019778) LPAR6 (ENSCJPG00005019776) RB1 (ENSCJPG00005019775) ITM2B (ENSCJPG00005019774) MED4 (ENSCJPG00005019773) ENSCJPG00005019772 NUDT15 (ENSCJPG00005019771) SUCLA2 (ENSCJPG00005019770) HTR2A (ENSCJPG00005019764) ESD (ENSCJPG00005019763) LRCH1 (ENSCJPG00005019762) RUBCNL (ENSCJPG00005019761) #19 ENSCJPG00005019760 LCP1 (ENSCJPG00005019758) #22 CPB2 (ENSCJPG00005019757) #23 ZC3H13 (ENSCJPG00005019756) #24 SIAH3 (ENSCJPG00005019755) #25 ENSCJPG00005019754 ##26 ENSCJPG00005019753 COG3 (ENSCJPG00005019735) #27 SLC25A30 (ENSCJPG00005019734) #28 TPT1 (ENSCJPG00005019733) #29 KCTD4 (ENSCJPG00005019730) #31 GTF2F2 (ENSCJPG00005019729) #30 GPALPP1 (ENSCJPG00005019728) NUFIP1 (ENSCJPG00005019727) #33 ENSCJPG00005019724 ENSCJPG00005019723 CCDC122 (ENSCJPG00005019719) Neognathae_b ANCESTRAL SPECIES ENSGT01100000263484.C.a.l ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT00990000211105 ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528.d ENSGT00940000160585 #19 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000169379 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00940000159552 #31 ENSGT00390000016051 #30 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00940000163647 ENSGT00390000000693 #37 ENSGT00390000005130 Neognathae_c ANCESTRAL SPECIES 11 ENSGT00940000153676.b ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT00990000211105 ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528.d ENSGT00940000160585 #19 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000169379 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00940000159552 #31 ENSGT00390000016051 #30 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00390000000693 #37 ENSGT00390000005130 ENSGT00390000006788.a.b Golden eagle MODERN SPECIES 5 CDADC1 (ENSACCG00020012412) FNDC3A (ENSACCG00020012324) CYSLTR2 (ENSACCG00020012257) RCBTB2 (ENSACCG00020012227) LPAR6 (ENSACCG00020012201) RB1 (ENSACCG00020012131) ITM2B (ENSACCG00020012021) MED4 (ENSACCG00020011985) NUDT15 (ENSACCG00020011958) SUCLA2 (ENSACCG00020011934) ENSACCG00020011887 HTR2A (ENSACCG00020011855) ESD (ENSACCG00020011833) LRCH1 (ENSACCG00020011771) RUBCNL (ENSACCG00020011678) #19 LCP1 (ENSACCG00020011643) #22 CPB2 (ENSACCG00020011590) #23 ZC3H13 (ENSACCG00020011527) #24 SIAH3 (ENSACCG00020011489) #25 ENSACCG00020011478 COG3 (ENSACCG00020015739) #27 TPT1 (ENSACCG00020015696) #29 KCTD4 (ENSACCG00020015681) #31 GTF2F2 (ENSACCG00020015664) #30 GPALPP1 (ENSACCG00020015644) NUFIP1 (ENSACCG00020015631) #33 ENSACCG00020015612 LACC1 (ENSACCG00020015577) #37 CCDC122 (ENSACCG00020015565) ENOX1 (ENSACCG00020015543) DNAJC15 (ENSACCG00020015524) Kakapo MODERN SPECIES 11 CAB39L (ENSSHBG00005001515) CDADC1 (ENSSHBG00005001474) FNDC3A (ENSSHBG00005000045) CYSLTR2 (ENSSHBG00005000035) RCBTB2 (ENSSHBG00005000029) LPAR6 (ENSSHBG00005008437) RB1 (ENSSHBG00005008428) ITM2B (ENSSHBG00005008421) MED4 (ENSSHBG00005008402) NUDT15 (ENSSHBG00005008396) SUCLA2 (ENSSHBG00005008387) HTR2A (ENSSHBG00005008380) ESD (ENSSHBG00005008373) LRCH1 (ENSSHBG00005008351) RUBCNL (ENSSHBG00005008318) #19 LCP1 (ENSSHBG00005008297) #22 CPB2 (ENSSHBG00005008274) #23 ZC3H13 (ENSSHBG00005008235) #24 SIAH3 (ENSSHBG00005008221) #25 ENSSHBG00005008211 COG3 (ENSSHBG00005008186) #27 ENSSHBG00005008173 SLC25A30 (ENSSHBG00005008167) #28 TPT1 (ENSSHBG00005008145) #29 GTF2F2 (ENSSHBG00005008110) #30 GPALPP1 (ENSSHBG00005008087) NUFIP1 (ENSSHBG00005008070) #33 ENSSHBG00005008048 ENSSHBG00005008015 LACC1 (ENSSHBG00005008008) #37 CCDC122 (ENSSHBG00005007991) Passeriformes ANCESTRAL SPECIES 1 ENSGT00940000153676.b ENSGT01100000263484.C.a.l ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528.d ENSGT00940000160585 #19 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000169379 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00940000159552 #31 ENSGT00390000016051 #30 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00940000163647 ENSGT00390000000693 #37 ENSGT00390000005130 Great tit MODERN SPECIES CDADC1 (ENSPMJG00000014928) MLNR (ENSPMJG00000014927) FNDC3A (ENSPMJG00000014926) CYSLTR2 (ENSPMJG00000014925) RCBTB2 (ENSPMJG00000014923) LPAR6 (ENSPMJG00000014922) RB1 (ENSPMJG00000014921) ITM2B (ENSPMJG00000014920) MED4 (ENSPMJG00000014918) NUDT15 (ENSPMJG00000014917) SUCLA2 (ENSPMJG00000014916) HTR2A (ENSPMJG00000014914) ESD (ENSPMJG00000014913) LRCH1 (ENSPMJG00000014912) RUBCNL (ENSPMJG00000014911) #19 LCP1 (ENSPMJG00000014910) #22 CPB2 (ENSPMJG00000014909) #23 ZC3H13 (ENSPMJG00000014908) #24 SIAH3 (ENSPMJG00000014907) #25 ENSPMJG00000014906 COG3 (ENSPMJG00000014904) #27 SLC25A30 (ENSPMJG00000014903) #28 TPT1 (ENSPMJG00000014901) #29 KCTD4 (ENSPMJG00000014900) #31 GTF2F2 (ENSPMJG00000014899) #30 GPALPP1 (ENSPMJG00000014898) ENSPMJG00000014897 #33 ENSPMJG00000014894 ENSPMJG00000014893 LACC1 (ENSPMJG00000014889) #37 CCDC122 (ENSPMJG00000014888) Passeriformes_d ANCESTRAL SPECIES 1 ENSGT00940000153676.b ENSGT01100000263484.C.a.l ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528.d ENSGT00940000160585 #19 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000169379 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00940000159552 #31 ENSGT00390000016051 #30 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00940000163647 ENSGT00390000000693 #37 ENSGT00390000005130 Passeriformes_g ANCESTRAL SPECIES 2 ENSGT00940000153676.b ENSGT01100000263484.C.a.l ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528.d ENSGT00940000160585 #19 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000169379 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00940000163647 ENSGT00390000000693 #37 ENSGT00390000005130 Passeroidea ANCESTRAL SPECIES 5 ENSGT00940000153676.b ENSGT01100000263484.C.a.l ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528.d ENSGT00940000160585 #19 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000169379 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00940000159552 #31 ENSGT00390000016051 #30 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00940000163647 ENSGT00390000000693 #37 ENSGT00390000005130 Common canary MODERN SPECIES 4 MLNR (ENSSCAG00000013112) FNDC3A (ENSSCAG00000013116) CYSLTR2 (ENSSCAG00000013136) RCBTB2 (ENSSCAG00000013140) RB1 (ENSSCAG00000013148) LPAR6 (ENSSCAG00000013157) ENSSCAG00000013159 ITM2B (ENSSCAG00000013161) MED4 (ENSSCAG00000013164) NUDT15 (ENSSCAG00000013166) SUCLA2 (ENSSCAG00000013172) HTR2A (ENSSCAG00000013193) ESD (ENSSCAG00000013199) LRCH1 (ENSSCAG00000013210) RUBCNL (ENSSCAG00000013235) #19 LCP1 (ENSSCAG00000013250) #22 CPB2 (ENSSCAG00000013273) #23 ZC3H13 (ENSSCAG00000013302) #24 SIAH3 (ENSSCAG00000013336) #25 ENSSCAG00000013339 COG3 (ENSSCAG00000013411) #27 SLC25A30 (ENSSCAG00000013663) #28 TPT1 (ENSSCAG00000013667) #29 GTF2F2 (ENSSCAG00000013687) #30 KCTD4 (ENSSCAG00000013749) #31 GPALPP1 (ENSSCAG00000013759) NUFIP1 (ENSSCAG00000013762) #33 ENSSCAG00000013767 ENSSCAG00000013770 LACC1 (ENSSCAG00000013774) #37 CCDC122 (ENSSCAG00000013780) Zebra finch MODERN SPECIES CDADC1 (ENSTGUG00000012166) MLNR (ENSTGUG00000012172) FNDC3A (ENSTGUG00000012174) CYSLTR2 (ENSTGUG00000024279) RCBTB2 (ENSTGUG00000012201) LPAR6 (ENSTGUG00000012222) RB1 (ENSTGUG00000012205) ITM2B (ENSTGUG00000012223) MED4 (ENSTGUG00000022889) NUDT15 (ENSTGUG00000012236) SUCLA2 (ENSTGUG00000012239) HTR2A (ENSTGUG00000012255) ESD (ENSTGUG00000012256) LRCH1 (ENSTGUG00000012267) RUBCNL (ENSTGUG00000012281) #19 LCP1 (ENSTGUG00000012284) #22 CPB2 (ENSTGUG00000012294) #23 ZC3H13 (ENSTGUG00000012299) #24 SIAH3 (ENSTGUG00000012307) #25 ENSTGUG00000012308 COG3 (ENSTGUG00000012310) #27 SLC25A30 (ENSTGUG00000012317) #28 TPT1 (ENSTGUG00000012322) #29 KCTD4 (ENSTGUG00000022029) #31 GTF2F2 (ENSTGUG00000012334) #30 GPALPP1 (ENSTGUG00000012338) NUFIP1 (ENSTGUG00000012321) #33 ENSTGUG00000028881 LACC1 (ENSTGUG00000012353) #37 CCDC122 (ENSTGUG00000022901) ENOX1 (ENSTGUG00000012357) Medium ground finch MODERN SPECIES 25 CDADC1 (ENSGFOG00000012132) MLNR (ENSGFOG00000012122) FNDC3A (ENSGFOG00000012105) CYSLTR2 (ENSGFOG00000012100) RCBTB2 (ENSGFOG00000012093) LPAR6 (ENSGFOG00000012090) RB1 (ENSGFOG00000012079) ITM2B (ENSGFOG00000012074) MED4 (ENSGFOG00000012071) NUDT15 (ENSGFOG00000012066) SUCLA2 (ENSGFOG00000012031) HTR2A (ENSGFOG00000012020) ESD (ENSGFOG00000012013) LRCH1 (ENSGFOG00000011980) RUBCNL (ENSGFOG00000011968) #19 LCP1 (ENSGFOG00000011957) #22 CPB2 (ENSGFOG00000011953) #23 ENSGFOG00000011951 ENSGFOG00000011945 SIAH3 (ENSGFOG00000011944) #25 ENSGFOG00000011940 COG3 (ENSGFOG00000011892) #27 SLC25A30 (ENSGFOG00000011870) #28 TPT1 (ENSGFOG00000011861) #29 KCTD4 (ENSGFOG00000011857) #31 GTF2F2 (ENSGFOG00000011848) #30 GPALPP1 (ENSGFOG00000011840) NUFIP1 (ENSGFOG00000011829) #33 ENSGFOG00000011822 ENSGFOG00000011814 LACC1 (ENSGFOG00000011807) #37 Flycatcher MODERN SPECIES CDADC1 (ENSFALG00000008368) MLNR (ENSFALG00000008366) FNDC3A (ENSFALG00000008353) CYSLTR2 (ENSFALG00000014456) RCBTB2 (ENSFALG00000008347) LPAR6 (ENSFALG00000029001) RB1 (ENSFALG00000008306) ITM2B (ENSFALG00000028667) MED4 (ENSFALG00000008261) NUDT15 (ENSFALG00000008258) SUCLA2 (ENSFALG00000008254) HTR2A (ENSFALG00000008251) ESD (ENSFALG00000025468) LRCH1 (ENSFALG00000008234) RUBCNL (ENSFALG00000008218) #19 LCP1 (ENSFALG00000008208) #22 CPB2 (ENSFALG00000008204) #23 ZC3H13 (ENSFALG00000008196) #24 SIAH3 (ENSFALG00000008195) #25 ENSFALG00000014437 COG3 (ENSFALG00000008192) #27 ENSFALG00000008188 #28 TPT1 (ENSFALG00000008180) #29 KCTD4 (ENSFALG00000014420) #31 GTF2F2 (ENSFALG00000028328) #30 GPALPP1 (ENSFALG00000027021) NUFIP1 (ENSFALG00000024457) #33 TSC22D1 (ENSFALG00000008145) LACC1 (ENSFALG00000008143) #37 CCDC122 (ENSFALG00000026793) ENOX1 (ENSFALG00000008134) African ostrich MODERN SPECIES 101 RUBCNL (ENSSCUG00000000259) #19 LCP1 (ENSSCUG00000000260) #22 CPB2 (ENSSCUG00000000261) #23 ENSSCUG00000000262 SIAH3 (ENSSCUG00000000263) #25 ENSSCUG00000000264 ##26 COG3 (ENSSCUG00000000266) #27 Australian saltwater crocodile MODERN SPECIES 27 CDADC1 (ENSCPRG00005002171) MLNR (ENSCPRG00005002169) FNDC3A (ENSCPRG00005002157) CYSLTR2 (ENSCPRG00005002091) RCBTB2 (ENSCPRG00005002083) LPAR6 (ENSCPRG00005002061) RB1 (ENSCPRG00005002044) ITM2B (ENSCPRG00005002035) MED4 (ENSCPRG00005002030) NUDT15 (ENSCPRG00005002025) SUCLA2 (ENSCPRG00005002006) HTR2A (ENSCPRG00005001946) ESD (ENSCPRG00005001929) LRCH1 (ENSCPRG00005001910) RUBCNL (ENSCPRG00005001889) #19 LCP1 (ENSCPRG00005001844) #22 CPB2 (ENSCPRG00005001803) #23 ZC3H13 (ENSCPRG00005001772) #24 SIAH3 (ENSCPRG00005001723) #25 ENSCPRG00005001718 ENSCPRG00005001717 ##26 COG3 (ENSCPRG00005001678) #27 TPT1 (ENSCPRG00005001672) #29 KCTD4 (ENSCPRG00005001667) #31 GTF2F2 (ENSCPRG00005001658) #30 ENSCPRG00005001615 #32 NUFIP1 (ENSCPRG00005001604) #33 ENSCPRG00005001575 ENSCPRG00005001536 SERP2 (ENSCPRG00005001533) #35 LACC1 (ENSCPRG00005001487) #37 Cryptodira ANCESTRAL SPECIES ENSGT00940000159319 ENSGT01100000263536.B.c.a ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT01040000240539 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.b ##26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00940000163575 ENSGT00390000003758 #33 Testudinoidea ANCESTRAL SPECIES 1 ENSGT00940000153676.b ENSGT01100000263484.C.a.l ENSGT00940000159319 ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a.c ENSGT00390000011864 ENSGT00940000159528.a ENSGT00940000160585 #19 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.b ##26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00940000163575 ENSGT00390000003758 #33 Emydidae ANCESTRAL SPECIES 63 ENSGT01050000244937.a.a.c.a ENSGT00390000011864 ENSGT00940000159528.a ENSGT00940000160585 #19 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.b ##26 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 1 ENSTMTG00000000017 ENSTMTG00000000018 ENSTMTG00000000019 ENSTMTG00000000022 ENSTMTG00000000029 #19 ENSTMTG00000000317 #22 ENSTMTG00000001037 #23 ZC3H13 (ENSTMTG00000001053) #24 ENSTMTG00000001077 #25 ENSTMTG00000001090 ##26 ENSTMTG00000001186 #27 ENSTMTG00000001454 #28 ENSTMTG00000001464 #29 ENSTMTG00000001486 #30 ENSTMTG00000001500 #31 ENSTMTG00000001508 ENSTMTG00000001513 #33 ENSTMTG00000001520 ENSTMTG00000001527 #35 ENSTMTG00000001537 #37 ENSTMTG00000001552 Three-toed box turtle MODERN SPECIES 2 ENSTMTG00000007600 ENSTMTG00000007611 ENSTMTG00000007626 ENSTMTG00000007648 ENSTMTG00000007689 #19 ENSTMTG00000007992 #22 ENSTMTG00000012970 #23 ENSTMTG00000012990 ENSTMTG00000013006 ENSTMTG00000013018 #25 ENSTMTG00000013027 ##26 ENSTMTG00000013046 #27 ENSTMTG00000013078 #28 ENSTMTG00000013100 #29 ENSTMTG00000013140 #30 ENSTMTG00000013168 #31 ENSTMTG00000013172 ENSTMTG00000013191 #33 ENSTMTG00000013229 ENSTMTG00000013242 #35 ENSTMTG00000013255 #37 painted turtle MODERN SPECIES CDADC1 (ENSCPBG00000008499) MLNR (ENSCPBG00000008496) FNDC3A (ENSCPBG00000008461) CYSLTR2 (ENSCPBG00000008453) RCBTB2 (ENSCPBG00000008438) LPAR6 (ENSCPBG00000008431) RB1 (ENSCPBG00000008402) ITM2B (ENSCPBG00000008384) MED4 (ENSCPBG00000008373) NUDT15 (ENSCPBG00000008367) SUCLA2 (ENSCPBG00000008358) ENSCPBG00000008349 ENSCPBG00000008337 LRCH1 (ENSCPBG00000008287) RUBCNL (ENSCPBG00000008254) #19 LCP1 (ENSCPBG00000008230) #22 CPB2 (ENSCPBG00000008214) #23 ENSCPBG00000008192 SIAH3 (ENSCPBG00000008182) #25 ENSCPBG00000008175 ##26 ENSCPBG00000008168 COG3 (ENSCPBG00000008129) #27 SLC25A30 (ENSCPBG00000008116) #28 ENSCPBG00000008104 #29 KCTD4 (ENSCPBG00000008094) #31 GTF2F2 (ENSCPBG00000008086) #30 GPALPP1 (ENSCPBG00000008078) NUFIP1 (ENSCPBG00000008069) #33 ENSCPBG00000008064 SERP2 (ENSCPBG00000008055) #35 LACC1 (ENSCPBG00000008044) #37 Testudinidae ANCESTRAL SPECIES ENSGT00940000153676.b ENSGT01100000263484.C.a.l ENSGT00940000159319 ENSGT00990000203619.B ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a.c ENSGT00390000011864 ENSGT00940000159528.a ENSGT00940000160585 #19 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153137.a.b.b.b ##26 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00940000163647 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 Goode s thornscrub tortoise MODERN SPECIES MLNR (ENSGEVG00005006112) FNDC3A (ENSGEVG00005006289) ENSGEVG00005006386 RCBTB2 (ENSGEVG00005006426) RB1 (ENSGEVG00005006482) LPAR6 (ENSGEVG00005006519) ITM2B (ENSGEVG00005006545) MED4 (ENSGEVG00005006571) NUDT15 (ENSGEVG00005006585) SUCLA2 (ENSGEVG00005006596) ENSGEVG00005006611 HTR2A (ENSGEVG00005006629) ESD (ENSGEVG00005006649) LRCH1 (ENSGEVG00005006747) RUBCNL (ENSGEVG00005006850) #19 LCP1 (ENSGEVG00005006872) #22 CPB2 (ENSGEVG00005006904) #23 ENSGEVG00005006953 ZC3H13 (ENSGEVG00005006980) #24 SIAH3 (ENSGEVG00005007014) #25 ENSGEVG00005007027 ##26 COG3 (ENSGEVG00005007071) #27 SLC25A30 (ENSGEVG00005007147) #28 TPT1 (ENSGEVG00005007172) #29 GTF2F2 (ENSGEVG00005007190) #30 KCTD4 (ENSGEVG00005007209) #31 ENSGEVG00005007226 #32 NUFIP1 (ENSGEVG00005007250) #33 ENSGEVG00005007278 SERP2 (ENSGEVG00005007300) #35 LACC1 (ENSGEVG00005007327) #37 Abingdon island giant tortoise MODERN SPECIES 100 ENSCABG00000006166 RUBCNL (ENSCABG00000006163) #19 LCP1 (ENSCABG00000004131) #22 CPB2 (ENSCABG00000004026) #23 ZC3H13 (ENSCABG00000003984) #24 Chinese turtle MODERN SPECIES 684 RUBCNL (ENSPSIG00000016612) #19 ENSPSIG00000000170 LCP1 (ENSPSIG00000016060) #22 CPB2 (ENSPSIG00000013391) #23 ZC3H13 (ENSPSIG00000012518) #24 SIAH3 (ENSPSIG00000012108) #25 ENSPSIG00000000167 COG3 (ENSPSIG00000011130) #27 SLC25A30 (ENSPSIG00000009663) #28 TPT1 (ENSPSIG00000008741) #29 ENSPSIG00000008736 ENSPSIG00000008506 ENSPSIG00000007312 ENSPSIG00000007261 ENSPSIG00000006316 Lepidosauria ANCESTRAL SPECIES 40 ENSGT00940000160585 #19 ENSGT00950000183097.a.a.b #22 ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00390000016051 #30 ENSGT00940000159552 #31 ENSGT00390000012569.b #32 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00940000163647 ENSGT00390000000693 #37 ENSGT00390000005130 tuatara MODERN SPECIES 281 RUBCNL (ENSSPUG00000013285) #19 LCP1 (ENSSPUG00000013301) #22 CPB2 (ENSSPUG00000013325) #23 ZC3H13 (ENSSPUG00000013358) #24 SIAH3 (ENSSPUG00000013407) #25 ENSSPUG00000013416 ENSSPUG00000013425 COG3 (ENSSPUG00000013524) #27 SLC25A30 (ENSSPUG00000014137) #28 TPT1 (ENSSPUG00000014150) #29 GTF2F2 (ENSSPUG00000014183) #30 KCTD4 (ENSSPUG00000014235) #31 ENSSPUG00000014239 #32 ENSSPUG00000014250 ENSSPUG00000014261 #33 Anura ANCESTRAL SPECIES 3 ENSGT00530000063734.b ENSGT00940000157032 ENSGT00940000164733 ENSGT00940000158925 ENSGT01040000240444.A.a.a.a.a ENSGT00950000183202.b ENSGT00950000183115.b.a ENSGT00390000012063 ENSGT00390000003338 ENSGT00390000010170.a.b ENSGT01050000244937.a.a ENSGT00390000011864 ENSGT00940000159528 ENSGT00940000160585 #19 ENSGT00940000173214 ENSGT00950000183097.a.a.b #22 ENSGT01050000244888.b.a.c.a.t ENSGT00940000159160 #23 ENSGT00730000111163 #24 ENSGT00940000161772 #25 ENSGT00940000153655.A.a ENSGT00390000015682 #27 ENSGT00940000158961 #28 ENSGT00390000006051 #29 ENSGT00940000159552 #31 ENSGT00390000016051 #30 ENSGT00940000163575 ENSGT00390000003758 #33 ENSGT00940000166021 ENSGT00940000162467.b #35 ENSGT00390000000693 #37 Leishan spiny toad MODERN SPECIES 5 LPAR6 (ENSLLEG00000027201) ENSLLEG00000027179 RB1 (ENSLLEG00000026737) ITM2B (ENSLLEG00000026637) MED4 (ENSLLEG00000026463) NUDT15 (ENSLLEG00000026420) SUCLA2 (ENSLLEG00000025699) ENSLLEG00000025598 HTR2A (ENSLLEG00000025580) ENSLLEG00000025566 ENSLLEG00000025547 ESD (ENSLLEG00000025488) LRCH1 (ENSLLEG00000024780) RUBCNL (ENSLLEG00000024599) #19 ENSLLEG00000024408 LCP1 (ENSLLEG00000023900) #22 ENSLLEG00000023843 ENSLLEG00000023808 CPB2 (ENSLLEG00000023678) #23 ZC3H13 (ENSLLEG00000023396) #24 SIAH3 (ENSLLEG00000023320) #25 ENSLLEG00000023261 ENSLLEG00000023114 ENSLLEG00000023095 COG3 (ENSLLEG00000022634) #27 SLC25A30 (ENSLLEG00000022497) #28 TPT1 (ENSLLEG00000022362) #29 KCTD4 (ENSLLEG00000022326) #31 GTF2F2 (ENSLLEG00000021607) #30 ENSLLEG00000021528 GPALPP1 (ENSLLEG00000021140) Frog MODERN SPECIES 2 acvrl1 (ENSXETG00000031897) rcbtb2 (ENSXETG00000000559) lpar6 (ENSXETG00000000557) ENSXETG00000049131 rb1 (ENSXETG00000031493) ENSXETG00000048223 itm2b (ENSXETG00000024684) med4 (ENSXETG00000000549) nudt15 (ENSXETG00000039868) sucla2 (ENSXETG00000000548) htr2a (ENSXETG00000032623) esd (ENSXETG00000015425) lrch1 (ENSXETG00000011477) rubcnl (ENSXETG00000038667) #19 lrrc63 (ENSXETG00000038545) lcp1 (ENSXETG00000014954) #22 ENSXETG00000038557 cpb2 (ENSXETG00000026124) #23 zc3h13 (ENSXETG00000014637) #24 ENSXETG00000043129 ttll3 (ENSXETG00000026497) siah3 (ENSXETG00000036871) cog3 (ENSXETG00000014651) #27 slc25a30 (ENSXETG00000047934) #28 tpt1 (ENSXETG00000014661) #29 kctd4 (ENSXETG00000035680) #31 gtf2f2 (ENSXETG00000036901) #30 ENSXETG00000036976 gpalpp1 (ENSXETG00000042639) #32 nufip1 (ENSXETG00000014778) #33 tsc22d1 (ENSXETG00000033932)