Artiodactyla	ANCESTRAL SPECIES	15	ENSGT00940000162418	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00900000143760	ENSGT00500000045192 #17	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT00730000112003
Artiodactyla_a	ANCESTRAL SPECIES	19	ENSGT00940000162418	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00900000143760	ENSGT00500000045192 #17	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT00730000112003
Camelidae	ANCESTRAL SPECIES	13	ENSGT00940000158605.fb #7	ENSGT00940000162934 #8	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00500000045192 #17	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT01030000237992 #36	ENSGT01060000248544.a.a.a.b #37
Arabian camel	MODERN SPECIES	12	CFB (ENSCDRG00005012567) #7	C2 (ENSCDRG00005011879) #8	EHMT2 (ENSCDRG00005010474) #9	SLC44A4 (ENSCDRG00005009940) #10	NEU1 (ENSCDRG00005009842) #11	ENSCDRG00005009752 #12	HSPA1L (ENSCDRG00005009726) #13	LSM2 (ENSCDRG00005009650) #14	VARS1 (ENSCDRG00005009449) #15	VWA7 (ENSCDRG00005009323) #16	SAPCD1 (ENSCDRG00005009171) #17	MSH5 (ENSCDRG00005008921) #18	CLIC1 (ENSCDRG00005008844) #19	DDAH2 (ENSCDRG00005020427) #20	MPIG6B (ENSCDRG00005020398) #21	LY6G6C (ENSCDRG00005020392) #22	LY6G6D (ENSCDRG00005020378) #23	ENSCDRG00005020367 #24	LY6G6F (ENSCDRG00005020359) #25	ABHD16A (ENSCDRG00005020342) #26	LY6G5C (ENSCDRG00005020334) #27	LY6G5B (ENSCDRG00005020329) #28	CSNK2B (ENSCDRG00005020319) #29	GPANK1 (ENSCDRG00005020311) #30	C6orf47 (ENSCDRG00005020306) #31	APOM (ENSCDRG00005020295) #32	BAG6 (ENSCDRG00005020279) #33	PRRC2A (ENSCDRG00005020246) #34	AIF1 (ENSCDRG00005020227) #35	ENSCDRG00005020213 #36	LTB (ENSCDRG00005020205) #37
Artiodactyla_b	ANCESTRAL SPECIES	15	ENSGT00940000162418	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00900000143760	ENSGT00500000045192 #17	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT00730000112003
Pecora	ANCESTRAL SPECIES	21	ENSGT00940000162418	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00500000045192 #17	ENSGT01010000225285	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT00730000112003
Percora_a	ANCESTRAL SPECIES	12	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00950000185097.b	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00500000045192 #17	ENSGT01010000225285	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT00730000112003
Siberian musk deer	MODERN SPECIES	355	EHMT2 (ENSMMSG00000015492) #9	SLC44A4 (ENSMMSG00000015784) #10	NEU1 (ENSMMSG00000015841) #11	ENSMMSG00000015888	ENSMMSG00000015911 #12	ENSMMSG00000015929 #12	HSPA1L (ENSMMSG00000015950) #13	ENSMMSG00000015966 #14	VARS1 (ENSMMSG00000016074) #15	VWA7 (ENSMMSG00000016221) #16	SAPCD1 (ENSMMSG00000016304) #17	MSH5 (ENSMMSG00000016363) #18	CLIC1 (ENSMMSG00000016415) #19	DDAH2 (ENSMMSG00000016445) #20	ENSMMSG00000016480 #21	LY6G6C (ENSMMSG00000016576) #22	ENSMMSG00000016617 #23	ENSMMSG00000016665 #24	LY6G6F (ENSMMSG00000016691) #25	ABHD16A (ENSMMSG00000016753) #26	LY6G5C (ENSMMSG00000016897) #27	LY6G5B (ENSMMSG00000016938) #28	CSNK2B (ENSMMSG00000016976) #29	GPANK1 (ENSMMSG00000017020) #30	C6orf47 (ENSMMSG00000017045) #31	APOM (ENSMMSG00000017059) #32	BAG6 (ENSMMSG00000017185) #33	PRRC2A (ENSMMSG00000017522) #34	AIF1 (ENSMMSG00000017562) #35	NCR3 (ENSMMSG00000017609)	LST1 (ENSMMSG00000017641)
Bovidae	ANCESTRAL SPECIES	13	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00950000185097.b	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00500000045192 #17	ENSGT01010000225285	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT00730000112003
Caprinae	ANCESTRAL SPECIES	16	ENSGT00940000162418	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00950000185097.b	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00500000045192 #17	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT01060000248544.a.a.a.b #37
Goat	MODERN SPECIES	15	C2 (ENSCHIG00000014396) #8	ZBTB12 (ENSCHIG00000007636)	EHMT2 (ENSCHIG00000013309) #9	SLC44A4 (ENSCHIG00000022933) #10	NEU1 (ENSCHIG00000011024) #11	ENSCHIG00000022355	HSPA1L (ENSCHIG00000022996) #13	LSM2 (ENSCHIG00000016153) #14	VARS1 (ENSCHIG00000011008) #15	VWA7 (ENSCHIG00000017352) #16	SAPCD1 (ENSCHIG00000018682) #17	MSH5 (ENSCHIG00000019852) #18	CLIC1 (ENSCHIG00000024330) #19	DDAH2 (ENSCHIG00000026752) #20	MPIG6B (ENSCHIG00000014942) #21	LY6G6C (ENSCHIG00000007675) #22	LY6G6D (ENSCHIG00000011869) #23	ENSCHIG00000015667 #24	LY6G6F (ENSCHIG00000020017) #25	ABHD16A (ENSCHIG00000014665) #26	LY6G5C (ENSCHIG00000021696) #27	LY6G5B (ENSCHIG00000017460) #28	CSNK2B (ENSCHIG00000013556) #29	GPANK1 (ENSCHIG00000024637) #30	APOM (ENSCHIG00000004421) #32	BAG6 (ENSCHIG00000009273) #33	PRRC2A (ENSCHIG00000025355) #34	AIF1 (ENSCHIG00000023929) #35	NCR3 (ENSCHIG00000022732)	LTB (ENSCHIG00000018311) #37	TNF (ENSCHIG00000008732) ##37
Rambouillet Sheep	MODERN SPECIES	12	EHMT2 (ENSOARG00020011157) #9	SLC44A4 (ENSOARG00020011938) #10	NEU1 (ENSOARG00020012464) #11	ENSOARG00020012575	HSPA1A (ENSOARG00020012603) #12	ENSOARG00020012622 #12	HSPA1L (ENSOARG00020012683) #13	LSM2 (ENSOARG00020012709) #14	VARS1 (ENSOARG00020012761) #15	VWA7 (ENSOARG00020012877) #16	SAPCD1 (ENSOARG00020013063) #17	MSH5 (ENSOARG00020013176) #18	CLIC1 (ENSOARG00020013786) #19	DDAH2 (ENSOARG00020013844) #20	MPIG6B (ENSOARG00020013921) #21	LY6G6C (ENSOARG00020014588) #22	LY6G6D (ENSOARG00020014636) #23	ENSOARG00020014696 #24	LY6G6F (ENSOARG00020014747) #25	ABHD16A (ENSOARG00020014859) #26	LY6G5C (ENSOARG00020014941) #27	LY6G5B (ENSOARG00020014969) #28	CSNK2B (ENSOARG00020015036) #29	GPANK1 (ENSOARG00020015151) #30	C6orf47 (ENSOARG00020015190) #31	APOM (ENSOARG00020015214) #32	BAG6 (ENSOARG00020015341) #33	PRRC2A (ENSOARG00020015633) #34	NCR3 (ENSOARG00020015959)	AIF1 (ENSOARG00020015988) #35	ENSOARG00020016046
Bovinae	ANCESTRAL SPECIES	9	ENSGT00940000162418	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00500000045192 #17	ENSGT01010000225285	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT00730000112003
American bison	MODERN SPECIES	2855	C2 (ENSBBBG00000017192) #8	ZBTB12 (ENSBBBG00000017222)	EHMT2 (ENSBBBG00000017444) #9	SLC44A4 (ENSBBBG00000004359) #10	NEU1 (ENSBBBG00000017602) #11	HSPA1L (ENSBBBG00000017626) #13	LSM2 (ENSBBBG00000017635) #14	VARS1 (ENSBBBG00000017661) #15	VWA7 (ENSBBBG00000017695) #16	SAPCD1 (ENSBBBG00000017720) #17	ENSBBBG00000017722	MSH5 (ENSBBBG00000004388) #18	CLIC1 (ENSBBBG00000017854) #19	DDAH2 (ENSBBBG00000017876) #20	MPIG6B (ENSBBBG00000017879) #21	LY6G6C (ENSBBBG00000007580) #22	ENSBBBG00000017895 #23	ENSBBBG00000017900 #24	LY6G6F (ENSBBBG00000017908) #25	ABHD16A (ENSBBBG00000017936) #26	LY6G5C (ENSBBBG00000017944) #27	LY6G5B (ENSBBBG00000004413) #28	CSNK2B (ENSBBBG00000004423) #29	GPANK1 (ENSBBBG00000017990) #30	C6orf47 (ENSBBBG00000008009) #31	APOM (ENSBBBG00000018005) #32	BAG6 (ENSBBBG00000018104) #33	PRRC2A (ENSBBBG00000006900) #34	NCR3 (ENSBBBG00000018190)	ENSBBBG00000008565	LTB (ENSBBBG00000018207) #37
Bos	ANCESTRAL SPECIES	17	ENSGT00940000162934 #8	ENSGT00940000162418	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00500000045192 #17	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT00730000112003
Bos_b	ANCESTRAL SPECIES	8	ENSGT00940000162934 #8	ENSGT00940000162418	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00500000045192 #17	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT00730000112003
Cow	MODERN SPECIES	15	C2 (ENSBTAG00000007450) #8	ZBTB12 (ENSBTAG00000032031)	EHMT2 (ENSBTAG00000005676) #9	SLC44A4 (ENSBTAG00000005675) #10	NEU1 (ENSBTAG00000005674) #11	HSPA1A (ENSBTAG00000025441) #12	HSPA1L (ENSBTAG00000025442) #13	LSM2 (ENSBTAG00000005634) #14	VARS1 (ENSBTAG00000005631) #15	VWA7 (ENSBTAG00000005630) #16	SAPCD1 (ENSBTAG00000039620) #17	MSH5 (ENSBTAG00000019790) #18	CLIC1 (ENSBTAG00000013533) #19	DDAH2 (ENSBTAG00000013530) #20	MPIG6B (ENSBTAG00000013525) #21	LY6G6C (ENSBTAG00000000585) #22	LY6G6D (ENSBTAG00000053561) #23	LY6G6E (ENSBTAG00000000582) #24	LY6G6F (ENSBTAG00000000580) #25	ABHD16A (ENSBTAG00000000578) #26	LY6G5C (ENSBTAG00000025449) #27	LY6G5B (ENSBTAG00000039740) #28	CSNK2B (ENSBTAG00000008837) #29	GPANK1 (ENSBTAG00000008835) #30	C23H6orf47 (ENSBTAG00000023628) #31	APOM (ENSBTAG00000008833) #32	BAG6 (ENSBTAG00000019685) #33	PRRC2A (ENSBTAG00000019682) #34	AIF1 (ENSBTAG00000020554) #35	NCR3 (ENSBTAG00000018343)	LST1 (ENSBTAG00000053179)
Hybrid Bos Indicus	MODERN SPECIES	15	ZBTB12 (ENSBIXG00005019019)	EHMT2 (ENSBIXG00005018977) #9	SLC44A4 (ENSBIXG00005018846) #10	NEU1 (ENSBIXG00005018604) #11	ENSBIXG00005018581	ENSBIXG00005006512 #12	HSPA1L (ENSBIXG00005005515) #13	LSM2 (ENSBIXG00005018478) #14	VARS1 (ENSBIXG00005018440) #15	VWA7 (ENSBIXG00005018337) #16	SAPCD1 (ENSBIXG00005018319) #17	MSH5 (ENSBIXG00005018264) #18	CLIC1 (ENSBIXG00005018075) #19	DDAH2 (ENSBIXG00005018047) #20	MPIG6B (ENSBIXG00005018006) #21	LY6G6C (ENSBIXG00005017788) #22	LY6G6F (ENSBIXG00005017752) #25	ENSBIXG00005017698 #24	ABHD16A (ENSBIXG00005017656) #26	LY6G5C (ENSBIXG00005017571) #27	LY6G5B (ENSBIXG00005017415) #28	CSNK2B (ENSBIXG00005017519) #29	GPANK1 (ENSBIXG00005017397) #30	C6orf47 (ENSBIXG00005007799) #31	APOM (ENSBIXG00005002814) #32	BAG6 (ENSBIXG00005017269) #33	PRRC2A (ENSBIXG00005017154) #34	AIF1 (ENSBIXG00005017080) #35	NCR3 (ENSBIXG00005017063)	ENSBIXG00005017038	LTB (ENSBIXG00005005987) #37
Bos_a	ANCESTRAL SPECIES	11	ENSGT00940000162934 #8	ENSGT00940000162418	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00500000045192 #17	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT00730000112003
Wild yak	MODERN SPECIES	1620							HSPA1L (ENSBMUG00000014712) #13	LSM2 (ENSBMUG00000014702) #14	VARS1 (ENSBMUG00000014682) #15	VWA7 (ENSBMUG00000014638) #16	SAPCD1 (ENSBMUG00000014622) #17	MSH5 (ENSBMUG00000014578) #18	CLIC1 (ENSBMUG00000014520) #19	DDAH2 (ENSBMUG00000014500) #20	MPIG6B (ENSBMUG00000014463) #21	LY6G6C (ENSBMUG00000014340) #22	ENSBMUG00000014328 #23	ENSBMUG00000014295 #24	LY6G6F (ENSBMUG00000014276) #25	ABHD16A (ENSBMUG00000014247) #26	LY6G5C (ENSBMUG00000014189) #27	LY6G5B (ENSBMUG00000014177) #28	CSNK2B (ENSBMUG00000014151) #29	GPANK1 (ENSBMUG00000014094) #30	C6orf47 (ENSBMUG00000014078) #31	APOM (ENSBMUG00000014063) #32	BAG6 (ENSBMUG00000013973) #33	PRRC2A (ENSBMUG00000013852) #34	AIF1 (ENSBMUG00000013823) #35	ENSBMUG00000013810	ENSBMUG00000013739
Domestic yak	MODERN SPECIES	16	ZBTB12 (ENSBGRG00000019708)	EHMT2 (ENSBGRG00000018575) #9	SLC44A4 (ENSBGRG00000017713) #10	NEU1 (ENSBGRG00000017601) #11	ENSBGRG00000017349 #12	HSPA1L (ENSBGRG00000017307) #13	ENSBGRG00000017265 #14	VARS1 (ENSBGRG00000017116) #15	VWA7 (ENSBGRG00000016565) #16	ENSBGRG00000016515	SAPCD1 (ENSBGRG00000016355) #17	MSH5 (ENSBGRG00000016250) #18	CLIC1 (ENSBGRG00000016105) #19	DDAH2 (ENSBGRG00000016025) #20	MPIG6B (ENSBGRG00000015302) #21	LY6G6C (ENSBGRG00000015197) #22	LY6G6D (ENSBGRG00000015149) #23	ENSBGRG00000015047 #24	LY6G6F (ENSBGRG00000014933) #25	ABHD16A (ENSBGRG00000014683) #26	LY6G5C (ENSBGRG00000014635) #27	LY6G5B (ENSBGRG00000014555) #28	CSNK2B (ENSBGRG00000014465) #29	GPANK1 (ENSBGRG00000014429) #30	APOM (ENSBGRG00000014151) #32	BAG6 (ENSBGRG00000013751) #33	PRRC2A (ENSBGRG00000013605) #34	AIF1 (ENSBGRG00000013397) #35	NCR3 (ENSBGRG00000013327)	ENSBGRG00000013286	LTB (ENSBGRG00000013208) #37
Cetacea	ANCESTRAL SPECIES	7	ENSGT00940000162418	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00900000143760	ENSGT00500000045192 #17	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b.p #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT00730000112003
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00940000162418	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00900000143760	ENSGT00500000045192 #17	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b.p #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT00730000112003
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT00940000162418	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00900000143760	ENSGT00500000045192 #17	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b.p #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT00730000112003
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT00940000162418	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00900000143760	ENSGT00500000045192 #17	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b.p #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT00730000112003
Monodontidae	ANCESTRAL SPECIES	4	ENSGT00940000162934 #8	ENSGT00940000162418	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00500000045192 #17	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b.p #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT00730000112003
Beluga whale	MODERN SPECIES	79	CFB (ENSDLEG00000016539) #7	ZBTB12 (ENSDLEG00000016456)	EHMT2 (ENSDLEG00000016419) #9	SLC44A4 (ENSDLEG00000016245) #10	NEU1 (ENSDLEG00000016223) #11	ENSDLEG00000016206 #12	HSPA1L (ENSDLEG00000016199) #13	ENSDLEG00000016191 #14	VARS (ENSDLEG00000016141) #15	VWA7 (ENSDLEG00000016096) #16	SAPCD1 (ENSDLEG00000016079) #17	MSH5 (ENSDLEG00000015373) #18	CLIC1 (ENSDLEG00000015325) #19	DDAH2 (ENSDLEG00000015311) #20	MPIG6B (ENSDLEG00000015272) #21	LY6G6C (ENSDLEG00000015263) #22	ENSDLEG00000015256 #24	LY6G6F (ENSDLEG00000015136) #25	ABHD16A (ENSDLEG00000015115) #26	LY6G5B (ENSDLEG00000015077) #28	CSNK2B (ENSDLEG00000015070) #29	GPANK1 (ENSDLEG00000015063) #30	CUNH6orf47 (ENSDLEG00000015061) #31	APOM (ENSDLEG00000015050) #32	BAG6 (ENSDLEG00000019653) #33	PRRC2A (ENSDLEG00000019568) #34	AIF1 (ENSDLEG00000019557) #35	NCR3 (ENSDLEG00000019546)	LST1 (ENSDLEG00000019540)	LTB (ENSDLEG00000019533) #37	TNF (ENSDLEG00000019530) ##37
Narwhal	MODERN SPECIES	310	CFB (ENSMMNG00015014427) #7	C2 (ENSMMNG00015014376) #8	ZBTB12 (ENSMMNG00015014331)	EHMT2 (ENSMMNG00015014231) #9	SLC44A4 (ENSMMNG00015014161) #10	NEU1 (ENSMMNG00015014127) #11	HSPA1L (ENSMMNG00015014107) #13	ENSMMNG00015014100 #14	VARS1 (ENSMMNG00015014071) #15	VWA7 (ENSMMNG00015013234) #16	SAPCD1 (ENSMMNG00015013215) #17	MSH5 (ENSMMNG00015013174) #18	CLIC1 (ENSMMNG00015013149) #19	DDAH2 (ENSMMNG00015013128) #20	MPIG6B (ENSMMNG00015013061) #21	LY6G6C (ENSMMNG00015013009) #22	ENSMMNG00015012996 #23	ENSMMNG00015012988 #24	LY6G6F (ENSMMNG00015012977) #25	ABHD16A (ENSMMNG00015012962) #26	LY6G5C (ENSMMNG00015012943) #27	LY6G5B (ENSMMNG00015012926) #28	ENSMMNG00015012908 #29	GPANK1 (ENSMMNG00015012896) #30	C6orf47 (ENSMMNG00015012887) #31	APOM (ENSMMNG00015012873) #32	BAG6 (ENSMMNG00015012738) #33	PRRC2A (ENSMMNG00015012662) #34	AIF1 (ENSMMNG00015012634) #35	NCR3 (ENSMMNG00015012618)	LST1 (ENSMMNG00015012612)
Vaquita	MODERN SPECIES	2	C2 (ENSPSNG00000022293) #8	ZBTB12 (ENSPSNG00000022317)	EHMT2 (ENSPSNG00000022340) #9	SLC44A4 (ENSPSNG00000022406) #10	NEU1 (ENSPSNG00000022443) #11	ENSPSNG00000022462 #12	HSPA1L (ENSPSNG00000022467) #13	ENSPSNG00000022469 #14	VARS1 (ENSPSNG00000022482) #15	VWA7 (ENSPSNG00000022500) #16	ENSPSNG00000022510	SAPCD1 (ENSPSNG00000022514) #17	MSH5 (ENSPSNG00000022523) #18	DDAH2 (ENSPSNG00000022530) #20	MPIG6B (ENSPSNG00000022539) #21	LY6G6C (ENSPSNG00000022555) #22	ENSPSNG00000022557 #23	ENSPSNG00000022559 #24	LY6G6F (ENSPSNG00000022561) #25	ABHD16A (ENSPSNG00000022566) #26	LY6G5C (ENSPSNG00000022574) #27	LY6G5B (ENSPSNG00000022576) #28	ENSPSNG00000022578 #29	GPANK1 (ENSPSNG00000022581) #30	C6orf47 (ENSPSNG00000022582) #31	APOM (ENSPSNG00000022583) #32	BAG6 (ENSPSNG00000022588) #33	PRRC2A (ENSPSNG00000022591) #34	AIF1 (ENSPSNG00000009519) #35	NCR3 (ENSPSNG00000009593)	LST1 (ENSPSNG00000009643)
Dolphin	MODERN SPECIES	2748		EHMT2 (ENSTTRG00000014148) #9	SLC44A4 (ENSTTRG00000014144) #10	NEU1 (ENSTTRG00000014142) #11	ENSTTRG00000014139	ENSTTRG00000014138 #12	HSPA1L (ENSTTRG00000014132) #13	LSM2 (ENSTTRG00000014131) #14	VARS1 (ENSTTRG00000014128) #15	VWA7 (ENSTTRG00000014125) #16	SAPCD1 (ENSTTRG00000014124) #17	MSH5 (ENSTTRG00000014113) #18	CLIC1 (ENSTTRG00000014110) #19	DDAH2 (ENSTTRG00000014108) #20	MPIG6B (ENSTTRG00000014107) #21	LY6G6C (ENSTTRG00000014106) #22	ABHD16A (ENSTTRG00000014105) #26	ENSTTRG00000014104 #27	CSNK2B (ENSTTRG00000014103) #29	GPANK1 (ENSTTRG00000014102) #30	CUNH6orf47 (ENSTTRG00000014101) #31	APOM (ENSTTRG00000014100) #32	BAG6 (ENSTTRG00000014099) #33	PRRC2A (ENSTTRG00000014096) #34	AIF1 (ENSTTRG00000014095) #35	NCR3 (ENSTTRG00000014094)	ENSTTRG00000014091	LTB (ENSTTRG00000014088) #37	TNF (ENSTTRG00000014085) ##37	LTA (ENSTTRG00000014083) ##37	NFKBIL1 (ENSTTRG00000014078)
Sperm whale	MODERN SPECIES	9	ZBTB12 (ENSPCTG00005008961)	EHMT2 (ENSPCTG00005009060) #9	SLC44A4 (ENSPCTG00005010010) #10	NEU1 (ENSPCTG00005010808) #11	ENSPCTG00005010895 #12	ENSPCTG00005010915 #12	HSPA1L (ENSPCTG00005010962) #13	ENSPCTG00005010979 #14	VARS (ENSPCTG00005011043) #15	VWA7 (ENSPCTG00005011234) #16	SAPCD1 (ENSPCTG00005011374) #17	MSH5 (ENSPCTG00005011491) #18	CLIC1 (ENSPCTG00005011586) #19	DDAH2 (ENSPCTG00005011628) #20	MPIG6B (ENSPCTG00005011700) #21	LY6G6C (ENSPCTG00005012139) #22	ENSPCTG00005012184 #23	ENSPCTG00005012276 #24	LY6G6F (ENSPCTG00005012296) #25	ABHD16A (ENSPCTG00005012381) #26	LY6G5C (ENSPCTG00005012457) #27	LY6G5B (ENSPCTG00005012495) #28	CSNK2B (ENSPCTG00005012562) #29	GPANK1 (ENSPCTG00005012684) #30	C18H6orf47 (ENSPCTG00005012716) #31	APOM (ENSPCTG00005012735) #32	BAG6 (ENSPCTG00005012796) #33	PRRC2A (ENSPCTG00005012933) #34	AIF1 (ENSPCTG00005012984) #35	NCR3 (ENSPCTG00005013116)	LST1 (ENSPCTG00005013211)
Blue whale	MODERN SPECIES	2	EHMT2 (ENSBMSG00010018022) #9	SLC44A4 (ENSBMSG00010017609) #10	NEU1 (ENSBMSG00010017545) #11	ENSBMSG00010017521 #12	ENSBMSG00010017486 #12	ENSBMSG00010017443 #12	HSPA1L (ENSBMSG00010017435) #13	LSM2 (ENSBMSG00010017420) #14	VARS1 (ENSBMSG00010017361) #15	VWA7 (ENSBMSG00010017271) #16	SAPCD1 (ENSBMSG00010017235) #17	MSH5 (ENSBMSG00010016985) #18	CLIC1 (ENSBMSG00010016956) #19	DDAH2 (ENSBMSG00010016929) #20	MPIG6B (ENSBMSG00010016519) #21	LY6G6C (ENSBMSG00010016444) #22	LY6G6D (ENSBMSG00010016411) #23	ENSBMSG00010016395	LY6G6F (ENSBMSG00010016361) #25	ABHD16A (ENSBMSG00010016259) #26	LY6G5C (ENSBMSG00010016217) #27	LY6G5B (ENSBMSG00010016187) #28	ENSBMSG00010016124 #29	GPANK1 (ENSBMSG00010016097) #30	C6orf47 (ENSBMSG00010016079) #31	APOM (ENSBMSG00010016014) #32	BAG6 (ENSBMSG00010015866) #33	PRRC2A (ENSBMSG00010015824) #34	AIF1 (ENSBMSG00010015777) #35	NCR3 (ENSBMSG00010015748)	LST1 (ENSBMSG00010015629)
Suina	ANCESTRAL SPECIES	17	ENSGT00940000162418	ENSGT00940000159459 #9	ENSGT00940000160576 #10	ENSGT00950000182944.D #11	ENSGT00940000161215 #12	ENSGT00940000162096 #13	ENSGT00390000016597 #14	ENSGT00940000157775 #15	ENSGT00390000011517.a.b #16	ENSGT00900000143760	ENSGT00500000045192 #17	ENSGT00550000074977 #18	ENSGT00940000154708 #19	ENSGT00940000160769 #20	ENSGT00390000017793 #21	ENSGT00390000000752 #22	ENSGT00390000015960.a.b.b #23	ENSGT00390000007175 #24	ENSGT00390000015960.a.a.b #25	ENSGT00940000160908 #26	ENSGT00390000011513 #27	ENSGT00520000060793 #28	ENSGT00390000003781.e.b #29	ENSGT00390000003292 #30	ENSGT00390000009270 #31	ENSGT00390000001026 #32	ENSGT00390000016199 #33	ENSGT00950000183161.a.a #34	ENSGT00390000013846.a.b #35	ENSGT00390000006603	ENSGT00960000187673
Chacoan peccary	MODERN SPECIES	782	ZBTB12 (ENSCWAG00000020206)	EHMT2 (ENSCWAG00000020250) #9	SLC44A4 (ENSCWAG00000020510) #10	NEU1 (ENSCWAG00000020642) #11	ENSCWAG00000020668 #12	HSPA1L (ENSCWAG00000003666) #13	LSM2 (ENSCWAG00000003683) #14	VARS1 (ENSCWAG00000003706) #15	VWA7 (ENSCWAG00000003764) #16	ENSCWAG00000003822	SAPCD1 (ENSCWAG00000003859) #17	MSH5 (ENSCWAG00000003925) #18	CLIC1 (ENSCWAG00000004210) #19	DDAH2 (ENSCWAG00000004235) #20	MPIG6B (ENSCWAG00000004278) #21	LY6G6C (ENSCWAG00000004498) #22	ENSCWAG00000004529	ENSCWAG00000004566 #24	LY6G6F (ENSCWAG00000004637) #25	ABHD16A (ENSCWAG00000004679) #26	LY6G5C (ENSCWAG00000004790) #27	LY6G5B (ENSCWAG00000004812) #28	CSNK2B (ENSCWAG00000004861) #29	GPANK1 (ENSCWAG00000004918) #30	C6orf47 (ENSCWAG00000004932) #31	APOM (ENSCWAG00000004946) #32	BAG6 (ENSCWAG00000004994) #33	PRRC2A (ENSCWAG00000005158) #34	AIF1 (ENSCWAG00000005278) #35	NCR3 (ENSCWAG00000005333)	ENSCWAG00000005438
Pig	MODERN SPECIES	15	C2 (ENSSSCG00000001422) #8	ZBTB12 (ENSSSCG00000001421)	EHMT2 (ENSSSCG00000001420) #9	SLC44A4 (ENSSSCG00000001419) #10	NEU1 (ENSSSCG00000001418) #11	ENSSSCG00000029160 #12	HSPA1L (ENSSSCG00000030368) #13	LSM2 (ENSSSCG00000039021) #14	VARS1 (ENSSSCG00000038950) #15	VWA7 (ENSSSCG00000036796) #16	SAPCD1 (ENSSSCG00000061053) #17	MSH5 (ENSSSCG00000035596) #18	ENSSSCG00000039071 #19	DDAH2 (ENSSSCG00000038514) #20	MPIG6B (ENSSSCG00000034664) #21	LY6G6C (ENSSSCG00000036566) #22	LY6G6D (ENSSSCG00000060949) #23	ENSSSCG00000040885 #24	LY6G6F (ENSSSCG00000033590) #25	ABHD16A (ENSSSCG00000034923) #26	LY6G5C (ENSSSCG00000001416) #27	LY6G5B (ENSSSCG00000062414) #28	CSNK2B (ENSSSCG00000001414) #29	GPANK1 (ENSSSCG00000001413) #30	APOM (ENSSSCG00000001411) #32	BAG6 (ENSSSCG00000001410) #33	PRRC2A (ENSSSCG00000001409) #34	AIF1 (ENSSSCG00000032341) #35	ENSSSCG00000001407	ENSSSCG00000030882	LTB (ENSSSCG00000052357) #37