Euarchontoglires_A ANCESTRAL SPECIES 22 ENSGT00940000155230 ENSGT00940000153607.c.b ENSGT00940000153607.c.a ENSGT00940000154982 ENSGT00940000156313 ENSGT01030000234633.B.a ENSGT00390000006950.n ENSGT00390000018386 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00940000154920 ENSGT00390000014290 ENSGT00390000014786 ENSGT00530000063668.A ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008413 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 Glires ANCESTRAL SPECIES 23 ENSGT00940000155230 ENSGT00940000153607.c.b ENSGT00940000153607.c.a ENSGT00940000154982 ENSGT00940000156313 ENSGT01030000234633.B.a ENSGT00390000006950.n ENSGT00390000018386 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00940000154920 ENSGT00390000014290 ENSGT00390000014786 ENSGT00530000063668.A ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008413 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 Rodentia ANCESTRAL SPECIES 23 ENSGT00940000155230 ENSGT00940000153607.c.b ENSGT00940000153607.c.a ENSGT00940000154982 ENSGT00940000156313 ENSGT01030000234633.B.a ENSGT00390000006950.n ENSGT00390000018386 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00940000154920 ENSGT00390000014290 ENSGT00390000014786 ENSGT00530000063668.A ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT00390000008413 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 Rodentia_B ANCESTRAL SPECIES 27 ENSGT00940000155230 ENSGT00940000153607.c.b ENSGT00940000153607.c.a ENSGT00940000154982 ENSGT00940000156313 ENSGT01030000234633.B.a ENSGT00390000006950.n ENSGT00390000018386 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00940000154920 ENSGT00390000014290 ENSGT00390000014786 ENSGT00530000063668.A ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000156182 Myomorpha ANCESTRAL SPECIES 45 ENSGT00940000155230 ENSGT00940000153607.c.b ENSGT00940000153607.c.a ENSGT00940000154982 ENSGT00940000156313 ENSGT01030000234633.B.a ENSGT00390000006950.n ENSGT00390000018386 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00940000154920 ENSGT00390000014290 ENSGT00390000014786 ENSGT00530000063668.A ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000156182 Muroidea ANCESTRAL SPECIES 46 ENSGT00940000155230 ENSGT00940000153607.c.b ENSGT00940000153607.c.a ENSGT00940000154982 ENSGT00940000156313 ENSGT01030000234633.B.a ENSGT00390000006950.n ENSGT00390000018386 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00940000154920 ENSGT00390000014290 ENSGT00390000014786 ENSGT00530000063668.A ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000156182 Muroidea_A ANCESTRAL SPECIES 18 ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000156182 Cricetidae ANCESTRAL SPECIES 18 ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00960000189334 #27 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245.n #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 Cricetidae_B ANCESTRAL SPECIES 15 ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00960000189334 #27 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245.n #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 Northern American deer mouse MODERN SPECIES 10 ENSPEMG00000018607 #19 ENSPEMG00000029435 #20 Cetn1 (ENSPEMG00000006542) #21 Colec12 (ENSPEMG00000023597) #22 Thoc1 (ENSPEMG00000021789) #23 Usp14 (ENSPEMG00000022949) #24 Rock1 (ENSPEMG00000021896) #25 ENSPEMG00000013282 #26 ENSPEMG00000026744 #27 Greb1l (ENSPEMG00000000484) #28 ENSPEMG00000022444 #29 Snrpd1 (ENSPEMG00000014773) #30 Abhd3 (ENSPEMG00000021750) #31 Mib1 (ENSPEMG00000022324) #32 ENSPEMG00000030046 #33 Gata6 (ENSPEMG00000006709) #34 Rbbp8 (ENSPEMG00000023736) #35 ENSPEMG00000017799 #36 Cables1 (ENSPEMG00000004796) #37 Prairie vole MODERN SPECIES 5 ENSMOCG00000013630 Celf4 (ENSMOCG00000011985) AW554918 (ENSMOCG00000003484) Tpgs2 (ENSMOCG00000015240) ENSMOCG00000003587 ENSMOCG00000002183 Mocos (ENSMOCG00000022479) Elp2 (ENSMOCG00000012738) Slc39a6 (ENSMOCG00000016381) Rprd1a (ENSMOCG00000003883) ENSMOCG00000010379 Cetn1 (ENSMOCG00000002392) #21 Colec12 (ENSMOCG00000014632) #22 ENSMOCG00000014536 #23 Usp14 (ENSMOCG00000005253) #24 Rock1 (ENSMOCG00000000641) #25 ENSMOCG00000000990 Greb1l (ENSMOCG00000010109) #28 Esco1 (ENSMOCG00000000833) #29 Snrpd1 (ENSMOCG00000017367) ##30 Abhd3 (ENSMOCG00000006726) #31 Mib1 (ENSMOCG00000019355) #32 ENSMOCG00000009022 Gata6 (ENSMOCG00000005949) #34 Rbbp8 (ENSMOCG00000021766) #35 Cables1 (ENSMOCG00000012342) #37 Tmem241 (ENSMOCG00000020886) Riok3 (ENSMOCG00000012114) Cricetinae ANCESTRAL SPECIES 72 ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 Golden Hamster MODERN SPECIES 759 Phf10 (ENSMAUG00000013016) ENSMAUG00000014448 ENSMAUG00000003619 Dll1 (ENSMAUG00000012625) Fam120b (ENSMAUG00000015806) Psmb1 (ENSMAUG00000016104) Tbp (ENSMAUG00000019343) Pdcd2 (ENSMAUG00000019788) ENSMAUG00000016966 Rgmb (ENSMAUG00000017312) ENSMAUG00000017649 Riok2 (ENSMAUG00000019527) Lix1 (ENSMAUG00000005094) Lnpep (ENSMAUG00000008625) Cetn1 (ENSMAUG00000017748) #21 Colec12 (ENSMAUG00000008925) #22 Thoc1 (ENSMAUG00000010272) #23 Usp14 (ENSMAUG00000012333) #24 ENSMAUG00000013343 Rock1 (ENSMAUG00000011662) #25 Chinese hamster chok1gshd MODERN SPECIES 92 ENSCGRG00001019910 #21 ENSCGRG00001021932 #21 Colec12 (ENSCGRG00001022701) #22 Thoc1 (ENSCGRG00001016464) #23 Usp14 (ENSCGRG00001006324) #24 Rock1 (ENSCGRG00001014749) #25 Tmx3 (ENSCGRG00001021522) Sntg1 (ENSCGRG00001014187) ENSCGRG00001013632 ENSCGRG00001015031 ENSCGRG00001016310 Pard6g (ENSCGRG00001018816) Adnp2 (ENSCGRG00001021111) Rbfa (ENSCGRG00001022798) ENSCGRG00001014779 Hsbp1l1 (ENSCGRG00001020550) Slc66a2 (ENSCGRG00001024278) Kcng2 (ENSCGRG00001009283) Murinae ANCESTRAL SPECIES 17 ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000156182 Mus ANCESTRAL SPECIES 19 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00520000059545 ENSGT00940000157325.x ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000161191.A ENSGT01090000260098.B ENSGT00940000154453.a.b.b ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781.d #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000156182 Mus_A ANCESTRAL SPECIES 19 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00520000059545 ENSGT00940000157325.x ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000161191.A ENSGT01090000260098.B ENSGT00940000154453.a.b.b ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781.d #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a.d #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000156182 Mus_B ANCESTRAL SPECIES 19 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00520000059545 ENSGT00940000157325.x ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000161191.A ENSGT01090000260098.B ENSGT00940000154453.a.b.b ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781.d #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a.d #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000156182 Mus_C ANCESTRAL SPECIES 16 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00520000059545 ENSGT00940000157325.x ENSGT00940000156227.f ENSGT00940000156625 ENSGT00940000156232.b ENSGT00440000037780.a ENSGT00940000161191.A ENSGT01090000260098.B ENSGT00940000154453.a.b.b ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781.d #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a.d #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000156182 Steppe mouse MODERN SPECIES 3201 ENSMSIG00000022781 Fzd8 (ENSMSIG00000022775) Gjd4 (ENSMSIG00000022768) Ccny (ENSMSIG00000022747) ENSMSIG00000022718 Cetn1 (ENSMSIG00000022696) #21 ENSMSIG00000022689 Colec12 (ENSMSIG00000022632) #22 Thoc1 (ENSMSIG00000022548) #23 Usp14 (ENSMSIG00000022512) #24 ENSMSIG00000022495 Rock1 (ENSMSIG00000022459) #25 Greb1l (ENSMSIG00000022380) #28 Esco1 (ENSMSIG00000022328) #29 Snrpd1 (ENSMSIG00000022312) #30 Abhd3 (ENSMSIG00000022274) #31 Mib1 (ENSMSIG00000022152) #32 Gata6 (ENSMSIG00000022120) #34 spretus MODERN SPECIES 9 Zfp438 (MGP_SPRETEiJ_G0022888) Zeb1 (MGP_SPRETEiJ_G0022889) Arhgap12 (MGP_SPRETEiJ_G0022890) Kif5b (MGP_SPRETEiJ_G0022891) Epc1 (MGP_SPRETEiJ_G0022892) 4921524L21Rik (MGP_SPRETEiJ_G0022893) Rab18 (MGP_SPRETEiJ_G0022894) Mkx (MGP_SPRETEiJ_G0022895) Odad2 (MGP_SPRETEiJ_G0022896) Mpp7 (MGP_SPRETEiJ_G0022897) Wac (MGP_SPRETEiJ_G0022898) Fzd8 (MGP_SPRETEiJ_G0022899) Gjd4 (MGP_SPRETEiJ_G0022900) Ccny (MGP_SPRETEiJ_G0022901) Cetn1 (MGP_SPRETEiJ_G0022902) #21 Colec12 (MGP_SPRETEiJ_G0022903) #22 MGP_SPRETEiJ_G0022904 Thoc1 (MGP_SPRETEiJ_G0022905) #23 Usp14 (MGP_SPRETEiJ_G0022906) #24 Rock1 (MGP_SPRETEiJ_G0022907) #25 Greb1l (MGP_SPRETEiJ_G0022908) #28 Esco1 (MGP_SPRETEiJ_G0022909) #29 Snrpd1 (MGP_SPRETEiJ_G0022910) #30 Abhd3 (MGP_SPRETEiJ_G0022911) #31 Gata6 (MGP_SPRETEiJ_G0022912) #34 Rbbp8 (MGP_SPRETEiJ_G0022913) #35 Cables1 (MGP_SPRETEiJ_G0022914) #37 Tmem241 (MGP_SPRETEiJ_G0022915) Riok3 (MGP_SPRETEiJ_G0022916) Rmc1 (MGP_SPRETEiJ_G0022917) Npc1 (MGP_SPRETEiJ_G0022918) Mouse MODERN SPECIES 9 Zfp438 (ENSMUSG00000050945) Zeb1 (ENSMUSG00000024238) Arhgap12 (ENSMUSG00000041225) Kif5b (ENSMUSG00000006740) Epc1 (ENSMUSG00000024240) 4921524L21Rik (ENSMUSG00000039540) Rab18 (ENSMUSG00000073639) Mkx (ENSMUSG00000061013) Odad2 (ENSMUSG00000061802) Mpp7 (ENSMUSG00000057440) Wac (ENSMUSG00000024283) Fzd8 (ENSMUSG00000036904) Gjd4 (ENSMUSG00000036855) Ccny (ENSMUSG00000024286) Cetn1 (ENSMUSG00000050996) #21 Colec12 (ENSMUSG00000036103) #22 Thoc1 (ENSMUSG00000024287) #23 Usp14 (ENSMUSG00000047879) #24 Rock1 (ENSMUSG00000024290) #25 Greb1l (ENSMUSG00000042942) #28 Esco1 (ENSMUSG00000024293) #29 Snrpd1 (ENSMUSG00000002477) #30 Abhd3 (ENSMUSG00000002475) #31 Mib1 (ENSMUSG00000024294) #32 Gata6 (ENSMUSG00000005836) #34 Rbbp8 (ENSMUSG00000041238) #35 Cables1 (ENSMUSG00000040957) #37 Tmem241 (ENSMUSG00000049411) Riok3 (ENSMUSG00000024404) Rmc1 (ENSMUSG00000024410) Npc1 (ENSMUSG00000024413) Ryukyu mouse MODERN SPECIES 9 Zfp438 (MGP_CAROLIEiJ_G0021972) Zeb1 (MGP_CAROLIEiJ_G0021973) Arhgap12 (MGP_CAROLIEiJ_G0021974) Kif5b (MGP_CAROLIEiJ_G0021975) Epc1 (MGP_CAROLIEiJ_G0021976) 4921524L21Rik (MGP_CAROLIEiJ_G0021977) Rab18 (MGP_CAROLIEiJ_G0021978) Mkx (MGP_CAROLIEiJ_G0021979) Odad2 (MGP_CAROLIEiJ_G0021980) Mpp7 (MGP_CAROLIEiJ_G0021981) Wac (MGP_CAROLIEiJ_G0021982) Fzd8 (MGP_CAROLIEiJ_G0021983) Gjd4 (MGP_CAROLIEiJ_G0021984) Ccny (MGP_CAROLIEiJ_G0021985) Cetn1 (MGP_CAROLIEiJ_G0021986) #21 Colec12 (MGP_CAROLIEiJ_G0021987) #22 MGP_CAROLIEiJ_G0021988 Thoc1 (MGP_CAROLIEiJ_G0021989) #23 Usp14 (MGP_CAROLIEiJ_G0021990) #24 Rock1 (MGP_CAROLIEiJ_G0021991) #25 Greb1l (MGP_CAROLIEiJ_G0021992) #28 Esco1 (MGP_CAROLIEiJ_G0021993) #29 Snrpd1 (MGP_CAROLIEiJ_G0021994) #30 Abhd3 (MGP_CAROLIEiJ_G0021995) #31 Mib1 (MGP_CAROLIEiJ_G0021996) #32 Gata6 (MGP_CAROLIEiJ_G0021997) #34 Rbbp8 (MGP_CAROLIEiJ_G0021998) #35 Cables1 (MGP_CAROLIEiJ_G0021999) #37 Tmem241 (MGP_CAROLIEiJ_G0022000) Riok3 (MGP_CAROLIEiJ_G0022001) Rmc1 (MGP_CAROLIEiJ_G0022002) Shrew mouse MODERN SPECIES 6 Zfp438 (MGP_PahariEiJ_G0018710) Zeb1 (MGP_PahariEiJ_G0018711) MGP_PahariEiJ_G0018712 Kif5b (MGP_PahariEiJ_G0018713) Epc1 (MGP_PahariEiJ_G0018714) 4921524L21Rik (MGP_PahariEiJ_G0018715) Rab18 (MGP_PahariEiJ_G0018716) Mkx (MGP_PahariEiJ_G0018717) Odad2 (MGP_PahariEiJ_G0018718) Mpp7 (MGP_PahariEiJ_G0018719) Wac (MGP_PahariEiJ_G0018720) Fzd8 (MGP_PahariEiJ_G0018721) Gjd4 (MGP_PahariEiJ_G0018722) Ccny (MGP_PahariEiJ_G0018723) Cetn1 (MGP_PahariEiJ_G0018724) #21 Colec12 (MGP_PahariEiJ_G0018725) #22 Thoc1 (MGP_PahariEiJ_G0018726) #23 Usp14 (MGP_PahariEiJ_G0018727) #24 Rock1 (MGP_PahariEiJ_G0018728) #25 Greb1l (MGP_PahariEiJ_G0018729) #28 Esco1 (MGP_PahariEiJ_G0018730) #29 Snrpd1 (MGP_PahariEiJ_G0018731) #30 Abhd3 (MGP_PahariEiJ_G0018732) #31 MGP_PahariEiJ_G0018733 #32 MGP_PahariEiJ_G0018734 Gata6 (MGP_PahariEiJ_G0018735) #34 Rbbp8 (MGP_PahariEiJ_G0018736) #35 Cables1 (MGP_PahariEiJ_G0018737) #37 Tmem241 (MGP_PahariEiJ_G0018738) Riok3 (MGP_PahariEiJ_G0018739) Rmc1 (MGP_PahariEiJ_G0018740) Rat MODERN SPECIES 9 Vom2r75 (ENSRNOG00000022955) Cmc4 (ENSRNOG00000056435) Fundc2 (ENSRNOG00000024066) F8 (ENSRNOG00000031197) Mtmr1 (ENSRNOG00000002697) ENSRNOG00000069512 ENSRNOG00000069557 Zfp136 (ENSRNOG00000016417) Cetn1 (ENSRNOG00000016409) #21 Colec12 (ENSRNOG00000016366) #22 ENSRNOG00000066369 Sec13-ps2 (ENSRNOG00000068190) Thoc1 (ENSRNOG00000015332) #23 Usp14 (ENSRNOG00000014981) #24 Rock1 (ENSRNOG00000031092) #25 LOC120098305 (ENSRNOG00000030649) Greb1l (ENSRNOG00000023492) #28 LOC103694176 (ENSRNOG00000065120) Esco1 (ENSRNOG00000014031) #29 ENSRNOG00000065471 Snrpd1 (ENSRNOG00000013714) #30 Abhd3 (ENSRNOG00000029370) #31 Mib1 (ENSRNOG00000013281) #32 ENSRNOG00000071008 Gata6 (ENSRNOG00000023433) #34 Upper Galilee mountains blind mole rat MODERN SPECIES 536 Adcyap1 (ENSNGAG00000021652) Yes1 (ENSNGAG00000024151) ENSNGAG00000020252 Tyms (ENSNGAG00000024065) Cetn1 (ENSNGAG00000012639) #21 Colec12 (ENSNGAG00000017872) #22 ENSNGAG00000001401 #23 Usp14 (ENSNGAG00000018694) #24 Rock1 (ENSNGAG00000013091) #25 Greb1l (ENSNGAG00000023971) #28 Esco1 (ENSNGAG00000000995) #29 Snrpd1 (ENSNGAG00000023946) #30 Abhd3 (ENSNGAG00000020720) #31 ENSNGAG00000021505 Mib1 (ENSNGAG00000023747) #32 Gata6 (ENSNGAG00000019766) #34 Rbbp8 (ENSNGAG00000011276) #35 Lesser Egyptian jerboa MODERN SPECIES 55 Socs6 (ENSJJAG00000017873) Cbln2 (ENSJJAG00000021520) Neto1 (ENSJJAG00000024284) Cyb5a (ENSJJAG00000020003) Cndp2 (ENSJJAG00000013882) Cndp1 (ENSJJAG00000022953) Zadh2 (ENSJJAG00000013604) ENSJJAG00000017663 Zfp516 (ENSJJAG00000016237) Ndc80 (ENSJJAG00000020131) Adcyap1 (ENSJJAG00000024315) Yes1 (ENSJJAG00000006110) ENSJJAG00000019240 Tyms (ENSJJAG00000020713) Cetn1 (ENSJJAG00000010533) #21 Colec12 (ENSJJAG00000014240) #22 ENSJJAG00000014893 #23 Usp14 (ENSJJAG00000001720) #24 Rock1 (ENSJJAG00000012599) #25 Greb1l (ENSJJAG00000019827) #28 ENSJJAG00000024289 #29 Snrpd1 (ENSJJAG00000017698) #30 Abhd3 (ENSJJAG00000010354) #31 Mib1 (ENSJJAG00000014732) #32 Gata6 (ENSJJAG00000007856) #34 Rbbp8 (ENSJJAG00000023640) #35 Cables1 (ENSJJAG00000024283) #37 Tmem241 (ENSJJAG00000017364) Riok3 (ENSJJAG00000023689) Rmc1 (ENSJJAG00000018244) Npc1 (ENSJJAG00000012547) Kangaroo rat MODERN SPECIES 344 ENSDORG00000029047 Adcyap1 (ENSDORG00000026095) Yes1 (ENSDORG00000002603) ENSDORG00000015074 Tyms (ENSDORG00000015072) Cetn1 (ENSDORG00000003995) #21 Colec12 (ENSDORG00000003553) #22 Thoc1 (ENSDORG00000008060) #23 Usp14 (ENSDORG00000008059) #24 Rock1 (ENSDORG00000010078) #25 ENSDORG00000029933 Greb1l (ENSDORG00000015358) #28 ENSDORG00000023581 Esco1 (ENSDORG00000025246) #29 Snrpd1 (ENSDORG00000008349) #30 Abhd3 (ENSDORG00000024920) #31 Mib1 (ENSDORG00000009847) #32 Gata6 (ENSDORG00000029367) #34 ENSDORG00000024579 #35 Cables1 (ENSDORG00000013211) #37 ENSDORG00000028998 ENSDORG00000024258 Rodentia_A ANCESTRAL SPECIES 23 ENSGT00940000155230 ENSGT00940000153607.c.b ENSGT00940000153607.c.a ENSGT00940000154982 ENSGT00940000156313 ENSGT01030000234633.B.a ENSGT00390000006950.n ENSGT00390000018386 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00940000154920 ENSGT00390000014290 ENSGT00390000014786 ENSGT00530000063668.A ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT00390000008413 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 Sciuridae ANCESTRAL SPECIES 31 ENSGT00940000155230 ENSGT00940000153607.c.b ENSGT00940000153607.c.a ENSGT00940000154982 ENSGT00940000156313 ENSGT01030000234633.B.a ENSGT00390000006950.n ENSGT00390000018386 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00940000154920 ENSGT00390000014290 ENSGT00390000014786.gb ENSGT00530000063668.A ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000156182 Marmotini ANCESTRAL SPECIES 31 ENSGT00940000155230 ENSGT00940000153607.c.b ENSGT00940000153607.c.a ENSGT00940000154982 ENSGT00940000156313 ENSGT01030000234633.B.a ENSGT00390000006950.n ENSGT00390000018386 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00940000154920 ENSGT00390000014290 ENSGT00390000014786.gb ENSGT00530000063668.A ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000156182 Marmotini_b ANCESTRAL SPECIES 146 ENSGT00390000014786.gb ENSGT00530000063668.A ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000156182 Arctic ground squirrel MODERN SPECIES 789 CLUL1 (ENSUPAG00010005669) CETN1 (ENSUPAG00010005660) #21 COLEC12 (ENSUPAG00010005654) #22 Squirrel MODERN SPECIES 150 TYMS (ENSSTOG00000000910) CLUL1 (ENSSTOG00000014625) COLEC12 (ENSSTOG00000002173) #22 ENSSTOG00000030708 THOC1 (ENSSTOG00000006484) #23 USP14 (ENSSTOG00000006456) #24 ROCK1 (ENSSTOG00000020103) #25 GREB1L (ENSSTOG00000019416) #28 ENSSTOG00000004243 #29 SNRPD1 (ENSSTOG00000000485) #30 ABHD3 (ENSSTOG00000016232) #31 ENSSTOG00000029967 MIB1 (ENSSTOG00000006735) #32 GATA6 (ENSSTOG00000020228) #34 ENSSTOG00000011701 #35 ENSSTOG00000034709 ENSSTOG00000031094 #35 CABLES1 (ENSSTOG00000010410) #37 Alpin marmot MODERN SPECIES 10 MYL12A (ENSMMMG00000012076) MYOM1 (ENSMMMG00000011990) LPIN2 (ENSMMMG00000011908) EMILIN2 (ENSMMMG00000011901) SMCHD1 (ENSMMMG00000010857) NDC80 (ENSMMMG00000010813) METTL4 (ENSMMMG00000010797) ADCYAP1 (ENSMMMG00000010782) YES1 (ENSMMMG00000010661) ENOSF1 (ENSMMMG00000010652) TYMS (ENSMMMG00000010633) CLUL1 (ENSMMMG00000010598) CETN1 (ENSMMMG00000010586) #21 ENSMMMG00000010580 ENSMMMG00000010565 COLEC12 (ENSMMMG00000010551) #22 THOC1 (ENSMMMG00000010509) #23 USP14 (ENSMMMG00000010444) #24 ROCK1 (ENSMMMG00000010370) #25 ENSMMMG00000010344 GREB1L (ENSMMMG00000010290) #28 ENSMMMG00000010274 ESCO1 (ENSMMMG00000010226) #29 SNRPD1 (ENSMMMG00000010210) #30 ABHD3 (ENSMMMG00000010176) #31 MIB1 (ENSMMMG00000010103) #32 ENSMMMG00000010059 ENSMMMG00000010013 RBBP8 (ENSMMMG00000009957) #35 ENSMMMG00000009948 #37 TMEM241 (ENSMMMG00000009827) Eurasian red squirrel MODERN SPECIES 4 MYL12A (ENSSVLG00005020518) MYOM1 (ENSSVLG00005020656) LPIN2 (ENSSVLG00005021537) EMILIN2 (ENSSVLG00005021595) SMCHD1 (ENSSVLG00005021629) ENSSVLG00005021684 NDC80 (ENSSVLG00005021715) ENSSVLG00005021834 ENSSVLG00005021938 ADCYAP1 (ENSSVLG00005021960) ENSSVLG00005022001 ENOSF1 (ENSSVLG00005022213) ENSSVLG00005022566 CLUL1 (ENSSVLG00005022648) CETN1 (ENSSVLG00005022708) #21 COLEC12 (ENSSVLG00005022720) #22 ENSSVLG00005022749 THOC1 (ENSSVLG00005022810) #23 USP14 (ENSSVLG00005023043) #24 ROCK1 (ENSSVLG00005023445) #25 ENSSVLG00005023478 ENSSVLG00005023492 ENSSVLG00005023520 ENSSVLG00005005351 ENSSVLG00005005395 ENSSVLG00005005411 GREB1L (ENSSVLG00005005519) #28 ENSSVLG00005005830 ESCO1 (ENSSVLG00005005870) #29 ENSSVLG00005005902 SNRPD1 (ENSSVLG00005005913) #30 Hystricomorpha ANCESTRAL SPECIES 32 ENSGT00940000155230 ENSGT00940000153607.c.b ENSGT00940000153607.c.a ENSGT00940000154982 ENSGT00940000156313 ENSGT01030000234633.B.a ENSGT00390000006950.n ENSGT00390000018386 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00940000154920.o.a.b ENSGT00390000014290 ENSGT00390000014786 ENSGT00530000063668.A ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT00390000008413 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 Naked mole-rat female MODERN SPECIES 9 ENSHGLG00000006458 ENSHGLG00000033709 ENSHGLG00000004250 ENSHGLG00000004061 ENSHGLG00000038851 ENSHGLG00000035395 ENSHGLG00000041049 ENSHGLG00000046692 ADCYAP1 (ENSHGLG00000034296) ENSHGLG00000037949 ENSHGLG00000005389 ENOSF1 (ENSHGLG00000004003) TYMS (ENSHGLG00000003556) CLUL1 (ENSHGLG00000007174) CETN1 (ENSHGLG00000050145) #21 COLEC12 (ENSHGLG00000004045) #22 THOC1 (ENSHGLG00000003712) #23 USP14 (ENSHGLG00000006110) #24 ENSHGLG00000040346 ENSHGLG00000003509 #25 GREB1L (ENSHGLG00000017223) #28 ESCO1 (ENSHGLG00000011303) #29 SNRPD1 (ENSHGLG00000007152) #30 ENSHGLG00000006069 ABHD3 (ENSHGLG00000004626) #31 MIB1 (ENSHGLG00000003897) #32 ENSHGLG00000003667 #34 ENSHGLG00000011109 ENSHGLG00000002995 ENSHGLG00000044837 RBBP8 (ENSHGLG00000007546) #35 Hystricomorpha_a ANCESTRAL SPECIES 26 ENSGT00940000155230 ENSGT00940000153607.c.b ENSGT00940000153607.c.a ENSGT00940000154982 ENSGT00940000156313 ENSGT01030000234633.B.a ENSGT00390000006950.n ENSGT00390000018386 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00940000154920.o.a.b ENSGT00390000014290 ENSGT00390000014786 ENSGT00530000063668.A ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000156182 Guinea pig MODERN SPECIES 14 ENSCPOG00000006064 ADCYAP1 (ENSCPOG00000015151) YES1 (ENSCPOG00000015578) ENOSF1 (ENSCPOG00000015576) TYMS (ENSCPOG00000015574) CLUL1 (ENSCPOG00000015573) CETN1 (ENSCPOG00000022066) #21 COLEC12 (ENSCPOG00000010983) #22 THOC1 (ENSCPOG00000000959) #23 USP14 (ENSCPOG00000000958) #24 ROCK1 (ENSCPOG00000010474) #25 GREB1L (ENSCPOG00000023625) #28 ENSCPOG00000002728 #29 SNRPD1 (ENSCPOG00000004679) #30 ABHD3 (ENSCPOG00000002099) #31 ENSCPOG00000033037 MIB1 (ENSCPOG00000005351) #32 GATA6 (ENSCPOG00000026126) #34 RBBP8 (ENSCPOG00000007702) #35 CABLES1 (ENSCPOG00000010935) #37 ENSCPOG00000007986 RIOK3 (ENSCPOG00000007991) RMC1 (ENSCPOG00000006222) Hystricomorpha_b ANCESTRAL SPECIES 21 ENSGT00940000155230 ENSGT00940000153607.c.b ENSGT00940000153607.c.a ENSGT00940000154982 ENSGT00940000156313 ENSGT01030000234633.B.a ENSGT00390000006950.n ENSGT00390000018386 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00940000154920.o.a.b ENSGT00390000014290 ENSGT00390000014786 ENSGT00530000063668.A ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00940000160814 #34 ENSGT00530000063835.b #35 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000156182 Long-tailed chinchilla MODERN SPECIES 109 MYL12A (ENSCLAG00000011666) MYOM1 (ENSCLAG00000009876) LPIN2 (ENSCLAG00000016431) EMILIN2 (ENSCLAG00000007221) SMCHD1 (ENSCLAG00000008351) NDC80 (ENSCLAG00000011120) METTL4 (ENSCLAG00000011739) ENSCLAG00000011958 ENSCLAG00000007052 ADCYAP1 (ENSCLAG00000007209) YES1 (ENSCLAG00000007748) ENOSF1 (ENSCLAG00000008600) TYMS (ENSCLAG00000011426) CLUL1 (ENSCLAG00000011935) CETN1 (ENSCLAG00000017717) #21 COLEC12 (ENSCLAG00000008952) #22 THOC1 (ENSCLAG00000009117) #23 USP14 (ENSCLAG00000008514) #24 ROCK1 (ENSCLAG00000012548) #25 GREB1L (ENSCLAG00000009372) #28 ESCO1 (ENSCLAG00000007066) #29 SNRPD1 (ENSCLAG00000008691) #30 ABHD3 (ENSCLAG00000009009) #31 MIB1 (ENSCLAG00000008780) #32 GATA6 (ENSCLAG00000007033) #34 RBBP8 (ENSCLAG00000007466) #35 CABLES1 (ENSCLAG00000009135) #37 TMEM241 (ENSCLAG00000008159) RIOK3 (ENSCLAG00000006767) RMC1 (ENSCLAG00000007215) NPC1 (ENSCLAG00000008539) Degu MODERN SPECIES 116 MYOM1 (ENSODEG00000006774) ENSODEG00000006584 LPIN2 (ENSODEG00000005432) EMILIN2 (ENSODEG00000007278) SMCHD1 (ENSODEG00000006113) ENSODEG00000006655 NDC80 (ENSODEG00000006479) METTL4 (ENSODEG00000006068) ENSODEG00000019310 ENSODEG00000007303 ADCYAP1 (ENSODEG00000007089) YES1 (ENSODEG00000005726) ENOSF1 (ENSODEG00000005113) ENSODEG00000006402 CETN1 (ENSODEG00000019340) #21 COLEC12 (ENSODEG00000007701) #22 ENSODEG00000019254 THOC1 (ENSODEG00000006623) #23 ENSODEG00000005831 #24 ROCK1 (ENSODEG00000006532) #25 GREB1L (ENSODEG00000006122) #28 ENSODEG00000004902 #29 ENSODEG00000019279 SNRPD1 (ENSODEG00000005764) #30 ABHD3 (ENSODEG00000005394) #31 MIB1 (ENSODEG00000005087) #32 GATA6 (ENSODEG00000004956) #34 ENSODEG00000005244 #35 CABLES1 (ENSODEG00000004628) #37 TMEM241 (ENSODEG00000005697) RIOK3 (ENSODEG00000006444) Lagomorpha ANCESTRAL SPECIES 41 ENSGT00940000155230 ENSGT00940000153607.c.b ENSGT00940000153607.c.a ENSGT00940000154982 ENSGT00940000156313 ENSGT01030000234633.B.a ENSGT00390000006950.n.p ENSGT00390000018386 ENSGT00390000016237 ENSGT00950000183154.b.a.b ENSGT00940000154920 ENSGT00390000014290 ENSGT00390000014786 ENSGT00530000063668.A ENSGT00940000157209.jb #21 ENSGT00950000183074.A #22 ENSGT00390000016232 #23 ENSGT00390000009615 #24 ENSGT01030000234517.A #25 ENSGT00390000008413 ENSGT00390000008041.B #28 ENSGT00940000157762 #29 ENSGT00510000047245 #30 ENSGT00950000182902.a.c #31 ENSGT00940000156781 #32 ENSGT00400000022086.a #37 ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000156182 ENSGT00940000153902.a Rabbit MODERN SPECIES 20 TGIF1 (ENSOCUG00000013752) ENSOCUG00000021304 MYOM1 (ENSOCUG00000008571) LPIN2 (ENSOCUG00000009433) EMILIN2 (ENSOCUG00000002553) SMCHD1 (ENSOCUG00000000020) NDC80 (ENSOCUG00000015410) METTL4 (ENSOCUG00000022390) ENSOCUG00000024410 ADCYAP1 (ENSOCUG00000009463) YES1 (ENSOCUG00000005874) ENOSF1 (ENSOCUG00000008678) ENSOCUG00000008667 CLUL1 (ENSOCUG00000008658) CETN1 (ENSOCUG00000009188) #21 COLEC12 (ENSOCUG00000022216) #22 THOC1 (ENSOCUG00000011601) #23 USP14 (ENSOCUG00000011595) #24 ROCK1 (ENSOCUG00000004848) #25 ENSOCUG00000033695 GREB1L (ENSOCUG00000010962) #28 ESCO1 (ENSOCUG00000009587) #29 SNRPD1 (ENSOCUG00000023761) #30 ENSOCUG00000009176 #31 MIB1 (ENSOCUG00000005755) #32 ENSOCUG00000037512 ENSOCUG00000032900 ENSOCUG00000007333 #35 RPS15 (ENSOCUG00000002862) ENSOCUG00000034381 ENSOCUG00000001524 #37 Pika MODERN SPECIES 2515 COLEC12 (ENSOPRG00000009855) #22 Tree shrew MODERN SPECIES 8571 COLEC12 (ENSTBEG00000006086) #22