Euteleostomi	ANCESTRAL SPECIES	941														ENSGT00940000154813	ENSGT00940000161215 #21	ENSGT00940000162096 #22
Sarcopterygii	ANCESTRAL SPECIES	824														ENSGT00940000154813	ENSGT00940000161215 #21	ENSGT00940000162096 #22
Tetrapoda	ANCESTRAL SPECIES	23	ENSGT00940000156540	ENSGT00940000159098	ENSGT00730000111179.b	ENSGT01030000234620.a.b.a	ENSGT01080000257684	ENSGT00390000006996	ENSGT00940000158836	ENSGT00940000154656	ENSGT00940000156116.C	ENSGT00390000012924.b	ENSGT00940000154746	ENSGT00940000159887	ENSGT00940000157501	ENSGT00940000154813	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000012412	ENSGT00940000155720	ENSGT00390000010349.a.a	ENSGT00940000154045.b	ENSGT00940000160944	ENSGT00950000183136.a.b	ENSGT00530000063867.a.b	ENSGT00530000063867.a.a	ENSGT00940000160366	ENSGT00950000183059.b.a.a	ENSGT00940000157058	ENSGT00940000155092.a	ENSGT00940000158752	ENSGT00390000004842	ENSGT00390000015553.a.b
Amniota	ANCESTRAL SPECIES	388															ENSGT00940000161215 #21	ENSGT00940000162096 #22
Mammalia	ANCESTRAL SPECIES	57	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000000752 #31	ENSGT00390000015960 #32	ENSGT00940000160908 #35	ENSGT00390000003781.e.b	ENSGT00390000003292	ENSGT00390000009270	ENSGT00390000001026	ENSGT00390000016199
Theria	ANCESTRAL SPECIES	4	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000015960.a.a ##32	ENSGT00940000160908 #35	ENSGT00390000003781.e.b	ENSGT00390000003292	ENSGT00390000009270
Eutheria	ANCESTRAL SPECIES	33	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00390000006516	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00390000006516	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000015960.a.a.b ##32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.a.b ##32	ENSGT00390000015960.a.b.a #34
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00390000006516	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00390000006516	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.a.a ##32	ENSGT00940000174223	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35
Glires	ANCESTRAL SPECIES	5	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00390000006516	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.a.a ##32	ENSGT00940000174223	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35
Rodentia	ANCESTRAL SPECIES	6	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00860000136229	ENSGT00390000006516	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00860000136229	ENSGT00390000006516	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00860000136229	ENSGT00940000162096 #22	ENSGT00390000016597.i.b #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Marmotini	ANCESTRAL SPECIES	18	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00860000136229	ENSGT00940000162096 #22	ENSGT00390000016597.i.b #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Alpin marmot	MODERN SPECIES	20	ATF6B (ENSMMMG00000017915) #7	TNXB (ENSMMMG00000017623) #8	CYP21A2 (ENSMMMG00000017250) #9	ENSMMMG00000017231 #10	STK19 (ENSMMMG00000017217) #11	DXO (ENSMMMG00000017202) #12	SKIC2 (ENSMMMG00000017173) #13	NELFE (ENSMMMG00000017122) #14	CFB (ENSMMMG00000017099) #15	C2 (ENSMMMG00000017046) #16	ZBTB12 (ENSMMMG00000017035) #17	EHMT2 (ENSMMMG00000010523) #18	SLC44A4 (ENSMMMG00000010455) #19	NEU1 (ENSMMMG00000010432) #20	ENSMMMG00000010423 #21	HSPA1L (ENSMMMG00000010419) #22	LSM2 (ENSMMMG00000010414) #23	VARS1 (ENSMMMG00000010374) #24	VWA7 (ENSMMMG00000010320) #25	SAPCD1 (ENSMMMG00000010310) #26	MSH5 (ENSMMMG00000010239) #27	CLIC1 (ENSMMMG00000010225) #28	DDAH2 (ENSMMMG00000010203) #29	MPIG6B (ENSMMMG00000010181) #30	LY6G6C (ENSMMMG00000010168) #31	LY6G6D (ENSMMMG00000010160) #32	ENSMMMG00000010150 #33	ENSMMMG00000010039 #34	ABHD16A (ENSMMMG00000010000) #35	LY6G5C (ENSMMMG00000009985) #36	LY6G5B (ENSMMMG00000009976) #37
Marmotini_b	ANCESTRAL SPECIES	82	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00860000136229	ENSGT00940000162096 #22	ENSGT00390000016597.i.b #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Squirrel	MODERN SPECIES	327	TNXB (ENSSTOG00000024569) #8	CYP21A2 (ENSSTOG00000014662) #9	ENSSTOG00000014639 #10	STK19 (ENSSTOG00000014629) #11	DXO (ENSSTOG00000027075) #12	SKIC2 (ENSSTOG00000014596) #13	NELFE (ENSSTOG00000027409) #14	CFB (ENSSTOG00000014577) #15	C2 (ENSSTOG00000029554) #16	ZBTB12 (ENSSTOG00000027411) #17	EHMT2 (ENSSTOG00000020917) #18	SLC44A4 (ENSSTOG00000020040) #19	NEU1 (ENSSTOG00000013187) #20	ENSSTOG00000029617 #21	ENSSTOG00000033750 #21	HSPA1L (ENSSTOG00000029893) #22	LSM2 (ENSSTOG00000013144) ##23	VARS1 (ENSSTOG00000013112) #24	VWA7 (ENSSTOG00000013089) #25	SAPCD1 (ENSSTOG00000020002) #26	MSH5 (ENSSTOG00000013079) #27	CLIC1 (ENSSTOG00000027220) #28	DDAH2 (ENSSTOG00000020601) #29	MPIG6B (ENSSTOG00000013076) #30	LY6G6C (ENSSTOG00000013066) #31	LY6G6D (ENSSTOG00000031597) #32	ENSSTOG00000020346 #33	ENSSTOG00000013043 #34	ABHD16A (ENSSTOG00000013021) #35	LY6G5C (ENSSTOG00000013012) #36	LY6G5B (ENSSTOG00000031349) #37
Arctic ground squirrel	MODERN SPECIES	662	ENSUPAG00010019727 #8	ENSUPAG00010019731 #8	CYP21A2 (ENSUPAG00010019746) #9	ENSUPAG00010019979 #10	STK19 (ENSUPAG00010019994) #11	DXO (ENSUPAG00010019997) #12	SKIC2 (ENSUPAG00010020008) #13	NELFE (ENSUPAG00010020030) #14	CFB (ENSUPAG00010020047) #15	C2 (ENSUPAG00010020070) #16	ZBTB12 (ENSUPAG00010020115) #17	EHMT2 (ENSUPAG00010020118) #18	NEU1 (ENSUPAG00010020203) #20	ENSUPAG00010020208 #21	ENSUPAG00010020209	HSPA1L (ENSUPAG00010020211) #22	ENSUPAG00010020214 #23	VARS1 (ENSUPAG00010020220) #24	VWA7 (ENSUPAG00010020234) #25	SAPCD1 (ENSUPAG00010020268) #26	MSH5 (ENSUPAG00010020275) #27	CLIC1 (ENSUPAG00010020314) #28	DDAH2 (ENSUPAG00010020318) #29	MPIG6B (ENSUPAG00010020337) #30	LY6G6C (ENSUPAG00010020345) #31	LY6G6D (ENSUPAG00010020352) #32	ENSUPAG00010020357 #33	ENSUPAG00010020367 #34	ABHD16A (ENSUPAG00010020393) #35	LY6G5C (ENSUPAG00010020418) #36	LY6G5B (ENSUPAG00010020428) #37
Eurasian red squirrel	MODERN SPECIES	16	FKBPL (ENSSVLG00005009660)	ATF6B (ENSSVLG00005009694) #7	ENSSVLG00005009930 #8	ENSSVLG00005010039 #8	CYP21A2 (ENSSVLG00005010144) #9	ENSSVLG00005010830 #10	STK19 (ENSSVLG00005013398) #11	DXO (ENSSVLG00005013565) #12	SKIC2 (ENSSVLG00005013769) #13	NELFE (ENSSVLG00005013975) #14	ZBTB12 (ENSSVLG00005015684) #17	EHMT2 (ENSSVLG00005015794) #18	SLC44A4 (ENSSVLG00005016167) #19	NEU1 (ENSSVLG00005016819) #20	ENSSVLG00005016858 #21	HSPA1L (ENSSVLG00005016879) #22	ENSSVLG00005016911 #23	VARS1 (ENSSVLG00005016986) #24	VWA7 (ENSSVLG00005017120) #25	SAPCD1 (ENSSVLG00005017335) #26	MSH5 (ENSSVLG00005017475) #27	CLIC1 (ENSSVLG00005018219) #28	DDAH2 (ENSSVLG00005018334) #29	MPIG6B (ENSSVLG00005018418) #30	LY6G6C (ENSSVLG00005018810) #31	LY6G6D (ENSSVLG00005018868) #32	ENSSVLG00005018920 #33	ENSSVLG00005019003 #34	ABHD16A (ENSSVLG00005019075) #35	LY6G5C (ENSSVLG00005019147) #36	LY6G5B (ENSSVLG00005019209) #37
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215.s #21	ENSGT00390000006516	ENSGT00940000161215.t #21	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Hystricomorpha_a	ANCESTRAL SPECIES	42	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215.s #21	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Guinea pig	MODERN SPECIES	15	TNXB (ENSCPOG00000021313) #8	ENSCPOG00000002716 #9	ENSCPOG00000025944	ENSCPOG00000031422 #10	STK19 (ENSCPOG00000020451) #11	DXO (ENSCPOG00000015108) #12	SKIC2 (ENSCPOG00000001307) #13	NELFE (ENSCPOG00000031829) #14	CFB (ENSCPOG00000025340) #15	C2 (ENSCPOG00000021284) #16	EHMT2 (ENSCPOG00000014788) #18	SLC44A4 (ENSCPOG00000014782) #19	NEU1 (ENSCPOG00000014780) #20	ENSCPOG00000000974 #21	ENSCPOG00000035597 #21	HSPA1L (ENSCPOG00000035528) #22	LSM2 (ENSCPOG00000021053) ##23	VARS1 (ENSCPOG00000000870) #24	VWA7 (ENSCPOG00000000869) #25	SAPCD1 (ENSCPOG00000024345) #26	MSH5 (ENSCPOG00000000868) #27	CLIC1 (ENSCPOG00000025841) #28	DDAH2 (ENSCPOG00000001824) #29	MPIG6B (ENSCPOG00000021071) #30	LY6G6C (ENSCPOG00000023366) #31	LY6G6D (ENSCPOG00000040085) #32	ENSCPOG00000039034 #33	ENSCPOG00000008520 #34	ABHD16A (ENSCPOG00000010799) #35	LY6G5C (ENSCPOG00000010796) #36	LY6G5B (ENSCPOG00000032497) #37
Hystricomorpha_b	ANCESTRAL SPECIES	3	ENSGT00940000158338 #9	ENSGT00940000155565 #8	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215.s #21	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Long-tailed chinchilla	MODERN SPECIES	144	CYP21A2 (ENSCLAG00000007939) #9	ENSCLAG00000008330 #8	ENSCLAG00000007618	ENSCLAG00000008416 #10	STK19 (ENSCLAG00000007097) #11	DXO (ENSCLAG00000006682) #12	SKIC2 (ENSCLAG00000007678) #13	NELFE (ENSCLAG00000009684) #14	CFB (ENSCLAG00000010397) #15	C2 (ENSCLAG00000007167) #16	ZBTB12 (ENSCLAG00000007108) #17	EHMT2 (ENSCLAG00000009673) #18	SLC44A4 (ENSCLAG00000006728) #19	NEU1 (ENSCLAG00000008497) #20	ENSCLAG00000018000 #21	HSPA1L (ENSCLAG00000007254) #22	LSM2 (ENSCLAG00000008081) ##23	VARS1 (ENSCLAG00000009470) #24	VWA7 (ENSCLAG00000007284) #25	SAPCD1 (ENSCLAG00000006758) #26	MSH5 (ENSCLAG00000011345) #27	CLIC1 (ENSCLAG00000008227) #28	MPIG6B (ENSCLAG00000007245) #30	DDAH2 (ENSCLAG00000006559) #29	LY6G6C (ENSCLAG00000009864) #31	ENSCLAG00000009432 #32	ENSCLAG00000008055 #33	ENSCLAG00000011200 #34	ABHD16A (ENSCLAG00000011581) #35	LY6G5C (ENSCLAG00000012352) #36	LY6G5B (ENSCLAG00000013439) #37
Degu	MODERN SPECIES	46	ENSODEG00000020459	ENSODEG00000017498 #8	ENSODEG00000017692	STK19 (ENSODEG00000017509) #11	DXO (ENSODEG00000017552) #12	SKIC2 (ENSODEG00000017516) #13	NELFE (ENSODEG00000017670) #14	CFB (ENSODEG00000017537) #15	C2 (ENSODEG00000017792) #16	ZBTB12 (ENSODEG00000017709) #17	EHMT2 (ENSODEG00000017547) #18	SLC44A4 (ENSODEG00000017567) #19	NEU1 (ENSODEG00000017719) #20	ENSODEG00000020560 #21	ENSODEG00000020564 #21	HSPA1L (ENSODEG00000020501) #22	LSM2 (ENSODEG00000017583) ##23	VARS1 (ENSODEG00000017681) #24	ENSODEG00000017700 #25	SAPCD1 (ENSODEG00000017689) #26	MSH5 (ENSODEG00000017644) #27	ENSODEG00000017682 #28	DDAH2 (ENSODEG00000017617) #29	MPIG6B (ENSODEG00000017842) #30	LY6G6C (ENSODEG00000017694) #31	LY6G6D (ENSODEG00000017755) #32	ENSODEG00000017710 #33	ENSODEG00000017678 #34	ABHD16A (ENSODEG00000018038) #35	LY6G5C (ENSODEG00000017654) #36	LY6G5B (ENSODEG00000017707) #37
Naked mole-rat female	MODERN SPECIES	4	PRRT1 (ENSHGLG00000016674)	FKBPL (ENSHGLG00000033526)	ATF6B (ENSHGLG00000016687) #7	ENSHGLG00000016534 #8	ENSHGLG00000016544 #8	STK19 (ENSHGLG00000016553) #11	DXO (ENSHGLG00000016572) #12	SKIC2 (ENSHGLG00000016596) #13	NELFE (ENSHGLG00000016601) #14	ENSHGLG00000042406 #16	EHMT2 (ENSHGLG00000019509) #18	SLC44A4 (ENSHGLG00000018523) #19	NEU1 (ENSHGLG00000046499) #20	ENSHGLG00000038683	ENSHGLG00000018564 #21	HSPA1L (ENSHGLG00000034751) #22	LSM2 (ENSHGLG00000011299) ##23	VWA7 (ENSHGLG00000012234) #25	ENSHGLG00000012415 #26	MSH5 (ENSHGLG00000012630) #27	CLIC1 (ENSHGLG00000012777) #28	DDAH2 (ENSHGLG00000039122) #29	ENSHGLG00000047674	ENSHGLG00000019251 #31	ENSHGLG00000040317 #32	ENSHGLG00000049061 #33	ENSHGLG00000005200	ENSHGLG00000037307	ENSHGLG00000050323	ENSHGLG00000050137	UBE2D1 (ENSHGLG00000009656)
Rodentia_B	ANCESTRAL SPECIES	8	ENSGT00940000162382	ENSGT00920000149187	ENSGT00940000160798 #7	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00860000136229	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Kangaroo rat	MODERN SPECIES	519	Fkbpl (ENSDORG00000004228)	Atf6b (ENSDORG00000004227) #7	ENSDORG00000009455 #8	ENSDORG00000009453 #9	C4b (ENSDORG00000011715) #10	Stk19 (ENSDORG00000011711) #11	Dxo (ENSDORG00000011708) #12	ENSDORG00000025296 #13	Nelfe (ENSDORG00000011705) #14	Cfb (ENSDORG00000011702) #15	Ehmt2 (ENSDORG00000011397) #18	Slc44a4 (ENSDORG00000011396) #19	Neu1 (ENSDORG00000011395) #20	ENSDORG00000016437 #21	ENSDORG00000023875 #21	Hspa1l (ENSDORG00000016436) #22	Lsm2 (ENSDORG00000026571) ##23
Myomorpha	ANCESTRAL SPECIES	11	ENSGT00940000162382	ENSGT00920000149187	ENSGT00940000160798 #7	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00860000136229	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Lesser Egyptian jerboa	MODERN SPECIES	220														ENSJJAG00000012778 #21	ENSJJAG00000012405 #21	Hspa1l (ENSJJAG00000018566) #22	ENSJJAG00000019477 #23	ENSJJAG00000019749 #24	Vwa7 (ENSJJAG00000023036) #25	Msh5 (ENSJJAG00000000116) #27	ENSJJAG00000010196 #28	Ddah2 (ENSJJAG00000011992) #29	Ly6g6c (ENSJJAG00000012162) #31	Abhd16a (ENSJJAG00000012572) #35	ENSJJAG00000013523	Gpank1 (ENSJJAG00000015387)	Apom (ENSJJAG00000017668)	Bag6 (ENSJJAG00000018884)	Prrc2a (ENSJJAG00000022267)	Aif1 (ENSJJAG00000005190)	ENSJJAG00000000376
Muroidea	ANCESTRAL SPECIES	15	ENSGT00940000162382	ENSGT00920000149187	ENSGT00940000160798 #7	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00860000136229	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1767	Fkbpl (ENSNGAG00000010616)	ENSNGAG00000023473 #7	ENSNGAG00000020837	Tnxb (ENSNGAG00000000974) #8	Cyp21a1 (ENSNGAG00000013887) #9	C4b (ENSNGAG00000012712) #10	Stk19 (ENSNGAG00000024026) #11	Dxo (ENSNGAG00000021244) #12	ENSNGAG00000024121 #13	Nelfe (ENSNGAG00000016248) #14	Cfb (ENSNGAG00000009653) #15	Zbtb12 (ENSNGAG00000011842) #17	Ehmt2 (ENSNGAG00000023439) #18	Slc44a4 (ENSNGAG00000021975) #19	Neu1 (ENSNGAG00000016139) #20	Hspa1l (ENSNGAG00000000836) #22	Lsm2 (ENSNGAG00000003997) ##23	Vars (ENSNGAG00000012151) #24	Vwa7 (ENSNGAG00000005246) #25	Sapcd1 (ENSNGAG00000022475) #26	Msh5 (ENSNGAG00000018979) #27	Clic1 (ENSNGAG00000023302) #28	Ddah2 (ENSNGAG00000002913) #29	Mpig6b (ENSNGAG00000021859) #30	Ly6g6c (ENSNGAG00000023350) #31	Ly6g6d (ENSNGAG00000022523) #32	Ly6g6e (ENSNGAG00000001035) #33	Ly6g6f (ENSNGAG00000004827) #34	Abhd16a (ENSNGAG00000016298) #35	Ly6g5c (ENSNGAG00000018931) #36	Ly6g5b (ENSNGAG00000012303) #37
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00940000162382	ENSGT00920000149187	ENSGT00940000160798 #7	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00860000136229	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Murinae	ANCESTRAL SPECIES	18	ENSGT00940000162382	ENSGT00920000149187	ENSGT00940000160798 #7	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00860000136229	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Mus	ANCESTRAL SPECIES	16	ENSGT00940000162382	ENSGT00920000149187	ENSGT00940000160798 #7	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00860000136229	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000162382	ENSGT00920000149187	ENSGT00940000160798 #7	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00860000136229	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000162382	ENSGT00920000149187	ENSGT00940000160798 #7	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00860000136229	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Mus_C	ANCESTRAL SPECIES	9	ENSGT00390000018295 #11	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00860000136229	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Steppe mouse	MODERN SPECIES	967																Hspa1l (ENSMSIG00000008680) #22
spretus	MODERN SPECIES	8	MGP_SPRETEiJ_G0022379 #11	MGP_SPRETEiJ_G0022380 #9	Dxo (MGP_SPRETEiJ_G0022381) #12	Skic2 (MGP_SPRETEiJ_G0022382) #13	Nelfe (MGP_SPRETEiJ_G0022383) #14	MGP_SPRETEiJ_G0022384 #15	MGP_SPRETEiJ_G0022385 #15	C2 (MGP_SPRETEiJ_G0022386) #16	Zbtb12 (MGP_SPRETEiJ_G0022387) #17	Ehmt2 (MGP_SPRETEiJ_G0022388) #18	Slc44a4 (MGP_SPRETEiJ_G0022389) #19	Neu1 (MGP_SPRETEiJ_G0022390) #20	MGP_SPRETEiJ_G0022391 #21	MGP_SPRETEiJ_G0022392 #21	MGP_SPRETEiJ_G0022393	Hspa1l (MGP_SPRETEiJ_G0022394) #22	Lsm2 (MGP_SPRETEiJ_G0022395) ##23	Vars (MGP_SPRETEiJ_G0022396) #24	Vwa7 (MGP_SPRETEiJ_G0022397) #25	Sapcd1 (MGP_SPRETEiJ_G0022398) #26	Msh5 (MGP_SPRETEiJ_G0022399) #27	Clic1 (MGP_SPRETEiJ_G0022400) #28	Ddah2 (MGP_SPRETEiJ_G0022401) #29	Mpig6b (MGP_SPRETEiJ_G0022402) #30	Ly6g6c (MGP_SPRETEiJ_G0022403) #31	Ly6g6d (MGP_SPRETEiJ_G0022404) #32	Ly6g6e (MGP_SPRETEiJ_G0022405) #33	Ly6g6f (MGP_SPRETEiJ_G0022406) #34	Abhd16a (MGP_SPRETEiJ_G0022407) #35	Ly6g5c (MGP_SPRETEiJ_G0022408) #36	Ly6g5b (MGP_SPRETEiJ_G0022409) #37
Mouse	MODERN SPECIES	8	C4b (ENSMUSG00000073418) #10	Cyp21a1 (ENSMUSG00000024365) #9	Stk19 (ENSMUSG00000061207) #11	Dxo (ENSMUSG00000040482) #12	Skic2 (ENSMUSG00000040356) #13	Nelfe (ENSMUSG00000024369) #14	Cfb (ENSMUSG00000090231) #15	Gm20547 (ENSMUSG00000092511)	C2 (ENSMUSG00000024371) #16	Zbtb12 (ENSMUSG00000049823) #17	Ehmt2 (ENSMUSG00000013787) #18	Slc44a4 (ENSMUSG00000007034) #19	Neu1 (ENSMUSG00000007038) #20	Hspa1b (ENSMUSG00000090877) #21	Hspa1a (ENSMUSG00000091971) #21	Hspa1l (ENSMUSG00000007033) #22	Lsm2 (ENSMUSG00000007050) ##23	Vars (ENSMUSG00000007029) #24	Vwa7 (ENSMUSG00000007030) #25	Sapcd1 (ENSMUSG00000036185) #26	Msh5 (ENSMUSG00000007035) #27	Clic1 (ENSMUSG00000007041) #28	Ddah2 (ENSMUSG00000007039) #29	Mpig6b (ENSMUSG00000073414) #30	Ly6g6c (ENSMUSG00000092586) #31	Ly6g6d (ENSMUSG00000073413) #32	Ly6g6e (ENSMUSG00000013766) #33	Ly6g6f (ENSMUSG00000034923) #34	Abhd16a (ENSMUSG00000007036) #35	Ly6g5c (ENSMUSG00000034482) #36	Ly6g5b (ENSMUSG00000043807) #37
Ryukyu mouse	MODERN SPECIES	8	C4b (MGP_CAROLIEiJ_G0021474) #10	Stk19 (MGP_CAROLIEiJ_G0021475) #11	Dxo (MGP_CAROLIEiJ_G0021476) #12	Skic2 (MGP_CAROLIEiJ_G0021477) #13	Nelfe (MGP_CAROLIEiJ_G0021478) #14	MGP_CAROLIEiJ_G0021479 #15	MGP_CAROLIEiJ_G0021480 #15	C2 (MGP_CAROLIEiJ_G0021481) #16	Zbtb12 (MGP_CAROLIEiJ_G0021482) #17	Ehmt2 (MGP_CAROLIEiJ_G0021483) #18	Slc44a4 (MGP_CAROLIEiJ_G0021484) #19	Neu1 (MGP_CAROLIEiJ_G0021485) #20	MGP_CAROLIEiJ_G0021486 #21	MGP_CAROLIEiJ_G0021487	MGP_CAROLIEiJ_G0021488 #21	Hspa1l (MGP_CAROLIEiJ_G0021489) #22	Lsm2 (MGP_CAROLIEiJ_G0021490) ##23	Vars (MGP_CAROLIEiJ_G0021491) #24	Vwa7 (MGP_CAROLIEiJ_G0021492) #25	Sapcd1 (MGP_CAROLIEiJ_G0021493) #26	Msh5 (MGP_CAROLIEiJ_G0021494) #27	Clic1 (MGP_CAROLIEiJ_G0021495) #28	Ddah2 (MGP_CAROLIEiJ_G0021496) #29	Mpig6b (MGP_CAROLIEiJ_G0021497) #30	Ly6g6c (MGP_CAROLIEiJ_G0021498) #31	Ly6g6d (MGP_CAROLIEiJ_G0021499) #32	Ly6g6e (MGP_CAROLIEiJ_G0021500) #33	Ly6g6f (MGP_CAROLIEiJ_G0021501) #34	Abhd16a (MGP_CAROLIEiJ_G0021502) #35	Ly6g5c (MGP_CAROLIEiJ_G0021503) #36	Ly6g5b (MGP_CAROLIEiJ_G0021504) #37
Shrew mouse	MODERN SPECIES	9	C4b (MGP_PahariEiJ_G0020469) #10	Stk19 (MGP_PahariEiJ_G0020470) #11	Dxo (MGP_PahariEiJ_G0020471) #12	Skic2 (MGP_PahariEiJ_G0020472) #13	Nelfe (MGP_PahariEiJ_G0020473) #14	MGP_PahariEiJ_G0020474 #15	MGP_PahariEiJ_G0020475 #15	C2 (MGP_PahariEiJ_G0020476) #16	Zbtb12 (MGP_PahariEiJ_G0020477) #17	Ehmt2 (MGP_PahariEiJ_G0020478) #18	Slc44a4 (MGP_PahariEiJ_G0020479) #19	Neu1 (MGP_PahariEiJ_G0020480) #20	MGP_PahariEiJ_G0020481 #21	MGP_PahariEiJ_G0020482 #21	MGP_PahariEiJ_G0020483	Hspa1l (MGP_PahariEiJ_G0020484) #22	Lsm2 (MGP_PahariEiJ_G0020485) ##23	Vars (MGP_PahariEiJ_G0020486) #24	Vwa7 (MGP_PahariEiJ_G0020487) #25	Sapcd1 (MGP_PahariEiJ_G0020488) #26	Msh5 (MGP_PahariEiJ_G0020489) #27	Clic1 (MGP_PahariEiJ_G0020490) #28	Ddah2 (MGP_PahariEiJ_G0020491) #29	Mpig6b (MGP_PahariEiJ_G0020492) #30	Ly6g6c (MGP_PahariEiJ_G0020493) #31	Ly6g6d (MGP_PahariEiJ_G0020494) #32	MGP_PahariEiJ_G0020495 #33	Ly6g6f (MGP_PahariEiJ_G0020496) #34	Abhd16a (MGP_PahariEiJ_G0020497) #35	Ly6g5c (MGP_PahariEiJ_G0020498) #36	Ly6g5b (MGP_PahariEiJ_G0020499) #37
Rat	MODERN SPECIES	12	Atf6b (ENSRNOG00000000431) #7	AABR07044388.2 (ENSRNOG00000033581) #8	Cyp21a1 (ENSRNOG00000000428) #9	C4a (ENSRNOG00000066573) #10	Stk19 (ENSRNOG00000048929) #11	Dxo (ENSRNOG00000000422) #12	Skic2 (ENSRNOG00000000421) #13	Nelfe (ENSRNOG00000000420) #14	Cfb (ENSRNOG00000051235) #16	Ehmt2 (ENSRNOG00000030630) #18	Slc44a4 (ENSRNOG00000000878) #19	Neu1 (ENSRNOG00000032942) #20	ENSRNOG00000067018	Hspa1b (ENSRNOG00000050647) #21	Hspa1a (ENSRNOG00000045654)	Hspa1l (ENSRNOG00000047966) #22	Lsm2 (ENSRNOG00000048725) ##23	Vars1 (ENSRNOG00000000867) #24	Vwa7 (ENSRNOG00000000860) #25	Sapcd1 (ENSRNOG00000000858) #26	Msh5 (ENSRNOG00000000857) #27	Ddah2 (ENSRNOG00000000842) #29	Clic1 (ENSRNOG00000029682) #28	Mpig6b (ENSRNOG00000026936) #30	Ly6g6c (ENSRNOG00000070605) #31	Ly6g6e (ENSRNOG00000027157) #33	Ly6g6d (ENSRNOG00000027225) #34	Abhd16a (ENSRNOG00000056637) #35	Ly6g5c (ENSRNOG00000000846) #36	Ly6g5b (ENSRNOG00000027516) #37	Csnk2b (ENSRNOG00000000847)
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00920000149187	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Prairie vole	MODERN SPECIES	170	Prrt1 (ENSMOCG00000019137)	Fkbpl (ENSMOCG00000005479)	ENSMOCG00000000322	Tnxb (ENSMOCG00000010394) #8	Cyp21a1 (ENSMOCG00000016151) #9	Stk19 (ENSMOCG00000021590) #11	Dxo (ENSMOCG00000005928) #12	Skic2 (ENSMOCG00000014240) #13	Nelfe (ENSMOCG00000003723) #14	Cfb (ENSMOCG00000001320) #15	Zbtb12 (ENSMOCG00000002711) #17	Ehmt2 (ENSMOCG00000015390) #18	Slc44a4 (ENSMOCG00000016917) #19	Neu1 (ENSMOCG00000012259) #20	ENSMOCG00000005617 #21	Hspa1l (ENSMOCG00000003223) #22	Lsm2 (ENSMOCG00000015306) ##23	Vars (ENSMOCG00000015404) #24	Vwa7 (ENSMOCG00000010617) #25	Sapcd1 (ENSMOCG00000000928) #26	Msh5 (ENSMOCG00000022918) #27	Clic1 (ENSMOCG00000017714) #28	Ddah2 (ENSMOCG00000011844) #29	Mpig6b (ENSMOCG00000022391) #30	Ly6g6c (ENSMOCG00000016036) #31	Ly6g6d (ENSMOCG00000006983) #32	Ly6g6e (ENSMOCG00000004129) #33	Ly6g6f (ENSMOCG00000000339) #34	Abhd16a (ENSMOCG00000011271) #35	ENSMOCG00000000609 #37	Csnk2b (ENSMOCG00000014968)
Northern American deer mouse	MODERN SPECIES	13	Atf6b (ENSPEMG00000019061) #7	Tnxb (ENSPEMG00000004596) #8	Cyp21a1 (ENSPEMG00000014963) #9	Dxo (ENSPEMG00000009229) #12	Stk19 (ENSPEMG00000015476) #11	Skic2 (ENSPEMG00000019001) #13	Nelfe (ENSPEMG00000015423) #14	Cfb (ENSPEMG00000017834) #15	C2 (ENSPEMG00000031051) #16	Zbtb12 (ENSPEMG00000028249) #17	Ehmt2 (ENSPEMG00000011404) #18	Slc44a4 (ENSPEMG00000011491) #19	Neu1 (ENSPEMG00000009374) #20	ENSPEMG00000027556 #21	ENSPEMG00000028093 #21	Hspa1l (ENSPEMG00000010938) #22	Lsm2 (ENSPEMG00000026796) ##23	Vars (ENSPEMG00000006639) #24	Vwa7 (ENSPEMG00000004592) #25	Sapcd1 (ENSPEMG00000030346) #26	Msh5 (ENSPEMG00000015565) #27	Clic1 (ENSPEMG00000016556) #28	Ddah2 (ENSPEMG00000009545) #29	Mpig6b (ENSPEMG00000009149) #30	Ly6g6c (ENSPEMG00000012722) #31	Ly6g6d (ENSPEMG00000006406) #32	Ly6g6e (ENSPEMG00000018140) #33	Ly6g6f (ENSPEMG00000007568) #34	Abhd16a (ENSPEMG00000012607) #35	ENSPEMG00000004879 #36	Csnk2b (ENSPEMG00000013471)
Cricetinae	ANCESTRAL SPECIES	43	ENSGT00920000149187	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000162096 #22	ENSGT00390000016597.j ##23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.b.a #34	ENSGT00940000160908 #35	ENSGT00390000003781.e.b	ENSGT00390000003292
Golden Hamster	MODERN SPECIES	856	Ppt2 (ENSMAUG00000010078)	ENSMAUG00000019956	ENSMAUG00000014704	Tnxb (ENSMAUG00000019386) #8	Cyp21a1 (ENSMAUG00000022007) #9	C4b (ENSMAUG00000015130) #10	Dxo (ENSMAUG00000022102) #12	Skic2 (ENSMAUG00000018613) #13	Nelfe (ENSMAUG00000016812) #14	Cfb (ENSMAUG00000005083) #15	Zbtb12 (ENSMAUG00000008051) #17	Ehmt2 (ENSMAUG00000021721) #18	Slc44a4 (ENSMAUG00000016147) #19	Neu1 (ENSMAUG00000006425) #20	ENSMAUG00000007504	Hspa1l (ENSMAUG00000015361) #22	Lsm2 (ENSMAUG00000021966) ##23	Vars (ENSMAUG00000006715) #24	Vwa7 (ENSMAUG00000012692) #25	Sapcd1 (ENSMAUG00000012648) #26	Msh5 (ENSMAUG00000016112) #27	Clic1 (ENSMAUG00000021659) #28	Ddah2 (ENSMAUG00000000563) #29	Mpig6b (ENSMAUG00000000529) #30	Ly6g6c (ENSMAUG00000014579) #31	Ly6g6d (ENSMAUG00000009349) #32	Ly6g6f (ENSMAUG00000020056) #34	Abhd16a (ENSMAUG00000012397) #35	Csnk2b (ENSMAUG00000021192)	Gpank1 (ENSMAUG00000014293)	D17H6S53E (ENSMAUG00000007562)
Chinese hamster chok1gshd	MODERN SPECIES	303	Atf6b (ENSCGRG00001012473) #7	Tnxb (ENSCGRG00001021481) #8	Cyp21a1 (ENSCGRG00001019003) #9	C4b (ENSCGRG00001019658) #10	Stk19 (ENSCGRG00001000387) #11	Dxo (ENSCGRG00001001718) #12	Skic2 (ENSCGRG00001008385) #13	Nelfe (ENSCGRG00001016608) #14	Cfb (ENSCGRG00001020632) #15	C2 (ENSCGRG00001005331) #16	ENSCGRG00001001109 #21	Zbtb12 (ENSCGRG00001002052) #17	Ehmt2 (ENSCGRG00001022736) #18	Slc44a4 (ENSCGRG00001020159) #19	Neu1 (ENSCGRG00001010017) #20	Hspa1l (ENSCGRG00001000703) #22	Lsm2 (ENSCGRG00001013932) ##23	Vars (ENSCGRG00001005686) #24	Vwa7 (ENSCGRG00001024017) #25	Sapcd1 (ENSCGRG00001001962) #26	Msh5 (ENSCGRG00001022358) #27	ENSCGRG00001005949 #28	Ddah2 (ENSCGRG00001013784) #29	Mpig6b (ENSCGRG00001000218) #30	Ly6g6c (ENSCGRG00001019394) #31	Ly6g6d (ENSCGRG00001009978) #32	Ly6g6e (ENSCGRG00001017928) #33	Ly6g6f (ENSCGRG00001009267) #34	Abhd16a (ENSCGRG00001012878) #35	Csnk2b (ENSCGRG00001003014)	Gpank1 (ENSCGRG00001007828)
Lagomorpha	ANCESTRAL SPECIES	481															ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597.i.a ##23
Rabbit	MODERN SPECIES	3	ATF6B (ENSOCUG00000023089) #7	ENSOCUG00000038853 #8	ENSOCUG00000007056 #8	CYP21A2 (ENSOCUG00000007053) #9	ENSOCUG00000007039 #10	STK19 (ENSOCUG00000037205) #11	DXO (ENSOCUG00000007029) #12	SKIC2 (ENSOCUG00000007019) #13	NELFE (ENSOCUG00000007012) #14	CFB (ENSOCUG00000029682) #15	C2 (ENSOCUG00000006999) #16	EHMT2 (ENSOCUG00000006980) #18	SLC44A4 (ENSOCUG00000006970) #19	ENSOCUG00000035524 #21	ENSOCUG00000036082 #21	HSPA1L (ENSOCUG00000002584) #22	ENSOCUG00000002583 ##23	VARS1 (ENSOCUG00000022463) #24	SAPCD1 (ENSOCUG00000027991) #26	VWA7 (ENSOCUG00000007980) #25	MSH5 (ENSOCUG00000007965) #27	ENSOCUG00000022545 #28	DDAH2 (ENSOCUG00000022267) #29	MPIG6B (ENSOCUG00000036714) #30	LY6G6C (ENSOCUG00000007958) #31	LY6G6D (ENSOCUG00000038545) #32	ENSOCUG00000038237 #33	ENSOCUG00000037325 ##32	ENSOCUG00000026911 ##32	ABHD16A (ENSOCUG00000023272) #35	LY6G5C (ENSOCUG00000007942) #36
Primates	ANCESTRAL SPECIES	5	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Catarrhini	ANCESTRAL SPECIES	5	ENSGT01030000235045	ENSGT00940000158338.j #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00610000087497	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00940000158338.i.a.b #9	ENSGT00940000158338.i.b #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418.g #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00610000087497	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000015960.a.a.b ##32	ENSGT00390000007175 #33	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Hominidae	ANCESTRAL SPECIES	5	ENSGT00940000155565 #8	ENSGT00940000158338.j #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418.g #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00610000087497	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00940000155565 #8	ENSGT00940000158338.j #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418.g #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00610000087497	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000015960.a.a.b ##32	ENSGT00390000007175 #33	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00940000155565 #8	ENSGT00940000158338.j #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418.g #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00610000087497	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000015960.a.a.b ##32	ENSGT00390000007175 #33	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Pan	ANCESTRAL SPECIES	5	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338.j #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162418.g #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00610000087497	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.a.b ##32	ENSGT00390000007175 #33	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37	ENSGT00390000003292
Bonobo	MODERN SPECIES	19	FKBPL (ENSPPAG00000024362)	ATF6B (ENSPPAG00000033378) #7	ENSPPAG00000042311 #8	ENSPPAG00000043471 #9	ENSPPAG00000032907 #10	ENSPPAG00000036454 #11	DXO (ENSPPAG00000041236) #12	SKIC2 (ENSPPAG00000040211) #13	NELFE (ENSPPAG00000039942) #14	ENSPPAG00000043444 #15	ZBTB12 (ENSPPAG00000033581) #17	EHMT2 (ENSPPAG00000030744) #18	SLC44A4 (ENSPPAG00000039346) #19	NEU1 (ENSPPAG00000037534) #20	ENSPPAG00000029378	HSPA1L (ENSPPAG00000011707) #22	LSM2 (ENSPPAG00000032431) #23	VARS1 (ENSPPAG00000034012) #24	VWA7 (ENSPPAG00000036620) #25	SAPCD1 (ENSPPAG00000022561) #26	MSH5 (ENSPPAG00000040149) #27	CLIC1 (ENSPPAG00000032689) #28	DDAH2 (ENSPPAG00000020023) #29	MPIG6B (ENSPPAG00000039362) #30	LY6G6C (ENSPPAG00000024591) #31	ENSPPAG00000036869 #33	ENSPPAG00000035577 ##32	ABHD16A (ENSPPAG00000040009) #35	LY6G5C (ENSPPAG00000043902) #36	ENSPPAG00000026174 #37	GPANK1 (ENSPPAG00000035166)
Chimpanzee	MODERN SPECIES	19	ENSPTRG00000044552 #10	ENSPTRG00000045611 #10	ENSPTRG00000045498 #12	ENSPTRG00000046780 #10	STK19 (ENSPTRG00000017999) #11	ENSPTRG00000052503 #12	SKIC2 (ENSPTRG00000017997) #13	NELFE (ENSPTRG00000017996) #14	C2 (ENSPTRG00000017994) #15	ZBTB12 (ENSPTRG00000017993) #17	EHMT2 (ENSPTRG00000017992) #18	SLC44A4 (ENSPTRG00000017991) #19	NEU1 (ENSPTRG00000017990) #20	ENSPTRG00000017989	ENSPTRG00000029753 #21	HSPA1L (ENSPTRG00000029754) #22	LSM2 (ENSPTRG00000017986) #23	VARS1 (ENSPTRG00000017985) #24	VWA7 (ENSPTRG00000017984) #25	SAPCD1 (ENSPTRG00000033893) #26	MSH5 (ENSPTRG00000017983) #27	CLIC1 (ENSPTRG00000017982) #28	DDAH2 (ENSPTRG00000034085) #29	MPIG6B (ENSPTRG00000017980) #30	LY6G6C (ENSPTRG00000050859) #31	ENSPTRG00000017979 #33	ENSPTRG00000017978 ##32	ABHD16A (ENSPTRG00000017977) #35	LY6G5C (ENSPTRG00000017976) #36	CSNK2B (ENSPTRG00000017974) #37	GPANK1 (ENSPTRG00000017973)
Human	MODERN SPECIES	18	C4B (ENSG00000224389) #10	C4A (ENSG00000244731) #10	STK19 (ENSG00000204344) #11	DXO (ENSG00000204348) #12	SKIC2 (ENSG00000204351) #13	NELFE (ENSG00000204356) #14	CFB (ENSG00000243649) #15	ENSG00000244255	ZBTB12 (ENSG00000204366) #17	C2 (ENSG00000166278) #16	EHMT2 (ENSG00000204371) #18	SLC44A4 (ENSG00000204385) #19	NEU1 (ENSG00000204386) #20	HSPA1B (ENSG00000204388) #21	HSPA1A (ENSG00000204389) #21	HSPA1L (ENSG00000204390) #22	LSM2 (ENSG00000204392) #23	VARS1 (ENSG00000204394) #24	VWA7 (ENSG00000204396) #25	SAPCD1 (ENSG00000228727) #26	MSH5 (ENSG00000204410) #27	CLIC1 (ENSG00000213719) #28	DDAH2 (ENSG00000213722) #29	LY6G6C (ENSG00000204421) #31	MPIG6B (ENSG00000204420) #30	LY6G6D (ENSG00000244355) #32	LY6G6F-LY6G6D (ENSG00000250641)	LY6G6F (ENSG00000204424) ##32	ABHD16A (ENSG00000204427) #35	LY6G5C (ENSG00000204428) #36	LY6G5B (ENSG00000240053) #37
Gorilla	MODERN SPECIES	19	ENSGGOG00000012983 #8	ENSGGOG00000012976 #9	ENSGGOG00000043529 #10	ENSGGOG00000041546 #8	CYP21A2 (ENSGGOG00000042419) #9	ENSGGOG00000039460 #10	ENSGGOG00000002280 #11	DXO (ENSGGOG00000002277) #12	SKIC2 (ENSGGOG00000002270) #13	NELFE (ENSGGOG00000002265) #14	CFB (ENSGGOG00000002254) #15	ZBTB12 (ENSGGOG00000015638) #17	EHMT2 (ENSGGOG00000026532) #18	SLC44A4 (ENSGGOG00000008972) #19	NEU1 (ENSGGOG00000008963) #20	HSPA1L (ENSGGOG00000027934) #22	LSM2 (ENSGGOG00000011383) #23	VARS1 (ENSGGOG00000011364) #24	VWA7 (ENSGGOG00000011354) #25	SAPCD1 (ENSGGOG00000011351) #26	MSH5 (ENSGGOG00000011338) #27	CLIC1 (ENSGGOG00000011331) #28	DDAH2 (ENSGGOG00000011324) #29	MPIG6B (ENSGGOG00000005575) #30	LY6G6C (ENSGGOG00000022162) #31	LY6G6E (ENSGGOG00000009989) #33	ENSGGOG00000009984 ##32	ABHD16A (ENSGGOG00000009970) #35	LY6G5C (ENSGGOG00000009963) #36	ENSGGOG00000005543 #37	GPANK1 (ENSGGOG00000005539)
Orangutan	MODERN SPECIES	19	ATF6B (ENSPPYG00000016479) #7	ENSPPYG00000016478 #8	ENSPPYG00000016476 #9	ENSPPYG00000040445	ENSPPYG00000016474 #11	DXO (ENSPPYG00000016473) #12	SKIC2 (ENSPPYG00000016472) #13	NELFE (ENSPPYG00000016471) #14	CFB (ENSPPYG00000016470) #15	C2 (ENSPPYG00000016469) #16	ZBTB12 (ENSPPYG00000016468) #17	EHMT2 (ENSPPYG00000016467) #18	SLC44A4 (ENSPPYG00000016466) #19	NEU1 (ENSPPYG00000036759) #20	ENSPPYG00000016463 #21	HSPA1L (ENSPPYG00000016462) #22	LSM2 (ENSPPYG00000016461) #23	VARS1 (ENSPPYG00000016460) #24	VWA7 (ENSPPYG00000016459) #25	SAPCD1 (ENSPPYG00000016458) #26	MSH5 (ENSPPYG00000016457) #27	CLIC1 (ENSPPYG00000016456) #28	DDAH2 (ENSPPYG00000016455) #29	MPIG6B (ENSPPYG00000016454) #30	LY6G6C (ENSPPYG00000036278) #31	ENSPPYG00000016452 #33	ENSPPYG00000016451 ##32	ABHD16A (ENSPPYG00000016450) #35	LY6G5C (ENSPPYG00000016449) #36	LY6G5B (ENSPPYG00000033400) #37	CSNK2B (ENSPPYG00000016448)
Gibbon	MODERN SPECIES	10	ATF6B (ENSNLEG00000006562) #7	TNXB (ENSNLEG00000006421) #8	ENSNLEG00000006561 #9	ENSNLEG00000033059 #9	ENSNLEG00000006490 #10	ENSNLEG00000006480 #11	DXO (ENSNLEG00000006470) #12	SKIC2 (ENSNLEG00000006451) #13	NELFE (ENSNLEG00000006449) #14	ENSNLEG00000006427 #15	ZBTB12 (ENSNLEG00000034429) #17	EHMT2 (ENSNLEG00000034730) #18	SLC44A4 (ENSNLEG00000006406) #19	NEU1 (ENSNLEG00000006395) #20	ENSNLEG00000027425	ENSNLEG00000006374 #22	LSM2 (ENSNLEG00000035542) #23	VARS1 (ENSNLEG00000006351) #24	VWA7 (ENSNLEG00000035155) #25	SAPCD1 (ENSNLEG00000006328) #26	MSH5 (ENSNLEG00000006268) #27	ENSNLEG00000034114 #28	DDAH2 (ENSNLEG00000006253) #29	ENSNLEG00000006251 #30	LY6G6C (ENSNLEG00000006247) #31	ENSNLEG00000027097 #33	LY6G6F (ENSNLEG00000006240) ##32	ABHD16A (ENSNLEG00000006226) #35	LY6G5C (ENSNLEG00000031008) #36	CSNK2B (ENSNLEG00000033762)	GPANK1 (ENSNLEG00000006201)
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT01030000235045	ENSGT00940000158338.i.a.a #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00610000087497	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597.q.a #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00900000143760	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT01030000235045	ENSGT00940000158338.i.a.a #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00610000087497	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597.q.a #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00940000158338.i.a.b #9	ENSGT00940000158338.i.b #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597.q.a #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00900000143760	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Cercopithecinae_b	ANCESTRAL SPECIES	49	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338.i.a.b #9	ENSGT00940000158338.i.b #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000162096 #22	ENSGT00390000016597.q.a #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Cercopithecinae_d	ANCESTRAL SPECIES	104	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338.i.a.b #9	ENSGT00940000158338.i.b #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000162096 #22	ENSGT00390000016597.q.a #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Drill	MODERN SPECIES	1350				ENSMLEG00000043295 #9	ENSMLEG00000038256 #9	ENSMLEG00000039539	STK19 (ENSMLEG00000031586) #11	DXO (ENSMLEG00000035257) #12	SKIC2 (ENSMLEG00000030512) #13	NELFE (ENSMLEG00000030245) #14	CFB (ENSMLEG00000030056) #15	C2 (ENSMLEG00000041630) #16	EHMT2 (ENSMLEG00000041773) #18	SLC44A4 (ENSMLEG00000014458) #19	NEU1 (ENSMLEG00000038202) #20	HSPA1L (ENSMLEG00000021869) #22	LSM2 (ENSMLEG00000037369) #23	VARS1 (ENSMLEG00000039307) #24	VWA7 (ENSMLEG00000031243) #25	ENSMLEG00000008907	SAPCD1 (ENSMLEG00000027426) #26	MSH5 (ENSMLEG00000043091) #27	CLIC1 (ENSMLEG00000032517) #28	DDAH2 (ENSMLEG00000035438) #29	MPIG6B (ENSMLEG00000042946) #30	LY6G6C (ENSMLEG00000042386) #31	ENSMLEG00000031690 #33	LY6G6F (ENSMLEG00000028871) ##32	ABHD16A (ENSMLEG00000032365) #35	LY6G5C (ENSMLEG00000031241) #36	LY6G5B (ENSMLEG00000042020) #37
Sooty mangabey	MODERN SPECIES	407													EHMT2 (ENSCATG00000044327) #18	SLC44A4 (ENSCATG00000034509) #19	NEU1 (ENSCATG00000038835) #20	HSPA1L (ENSCATG00000022181) #22	LSM2 (ENSCATG00000013737) #23	VARS1 (ENSCATG00000022394) #24	VWA7 (ENSCATG00000033106) #25	SAPCD1 (ENSCATG00000033410) #26	ENSCATG00000022905	MSH5 (ENSCATG00000034981) #27	CLIC1 (ENSCATG00000039844) #28	DDAH2 (ENSCATG00000040243) #29	MPIG6B (ENSCATG00000041131) #30	LY6G6C (ENSCATG00000041931) #31	ENSCATG00000042114 #33	LY6G6F (ENSCATG00000042176) ##32	ABHD16A (ENSCATG00000042679) #35	LY6G5C (ENSCATG00000038541) #36	LY6G5B (ENSCATG00000040483) #37
Macaca	ANCESTRAL SPECIES	9	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338.i.a.b #9	ENSGT00940000155739.k #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597.q.a #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00900000143760	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Pig-tailed macaque	MODERN SPECIES	259	PRRT1 (ENSMNEG00000042871)	FKBPL (ENSMNEG00000004346)	ATF6B (ENSMNEG00000028753) #7	ENSMNEG00000040667 #8	ENSMNEG00000019225 #9	ENSMNEG00000041718 #10	STK19 (ENSMNEG00000040878) #11	DXO (ENSMNEG00000032201) #12	SKIC2 (ENSMNEG00000044474) #13	NELFE (ENSMNEG00000032542) #14	CFB (ENSMNEG00000043601) #15	ZBTB12 (ENSMNEG00000022456) #17	EHMT2 (ENSMNEG00000036008) #18	SLC44A4 (ENSMNEG00000039530) #19	NEU1 (ENSMNEG00000031390) #20	HSPA1L (ENSMNEG00000002074) #22	LSM2 (ENSMNEG00000045355) #23	VARS1 (ENSMNEG00000042072) #24	VWA7 (ENSMNEG00000032211) #25	SAPCD1 (ENSMNEG00000033869) #26	ENSMNEG00000017724	MSH5 (ENSMNEG00000036432) #27	CLIC1 (ENSMNEG00000043962) #28	DDAH2 (ENSMNEG00000038233) #29	MPIG6B (ENSMNEG00000044443) #30	LY6G6C (ENSMNEG00000033639) #31	LY6G6F (ENSMNEG00000042161) ##32	ENSMNEG00000031923 #33	ABHD16A (ENSMNEG00000034721) #35	LY6G5C (ENSMNEG00000044640) #36	LY6G5B (ENSMNEG00000031034) #37
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338.i.a.b #9	ENSGT00940000155739.k #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597.q.a #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Rhesus	MODERN SPECIES	14	TNXB (ENSMMUG00000000758) #8	CYP21A2 (ENSMMUG00000000755) #9	ENSMMUG00000049499 #10	ENSMMUG00000059791 #10	STK19 (ENSMMUG00000000747) #11	SKIC2 (ENSMMUG00000000736) #13	DXO (ENSMMUG00000000741) #12	NELFE (ENSMMUG00000000735) #14	CFB (ENSMMUG00000000729) #15	ZBTB12 (ENSMMUG00000011683) #17	EHMT2 (ENSMMUG00000011679) #18	SLC44A4 (ENSMMUG00000021708) #19	NEU1 (ENSMMUG00000021707) #20	ENSMMUG00000064499	ENSMMUG00000041076 #21	HSPA1L (ENSMMUG00000029822) #22	LSM2 (ENSMMUG00000006832) #23	VARS1 (ENSMMUG00000006828) #24	VWA7 (ENSMMUG00000006827) #25	SAPCD1 (ENSMMUG00000045974) #26	MSH5 (ENSMMUG00000009702) #27	CLIC1 (ENSMMUG00000029827) #28	DDAH2 (ENSMMUG00000044472) #29	MPIG6B (ENSMMUG00000015694) #30	ENSMMUG00000058534	LY6G6C (ENSMMUG00000015693) #31	LY6G6F (ENSMMUG00000053324) ##32	ENSMMUG00000039268 #33	ABHD16A (ENSMMUG00000015686) #35	LY6G5C (ENSMMUG00000054159) #36	CSNK2B (ENSMMUG00000005294) #37
Crab-eating macaque	MODERN SPECIES	14	ENSMFAG00000059643 #8	ENSMFAG00000063910 #9	ENSMFAG00000003345 #10	STK19 (ENSMFAG00000038817) #11	DXO (ENSMFAG00000042173) #12	SKIC2 (ENSMFAG00000034235) #13	NELFE (ENSMFAG00000036108) #14	CFB (ENSMFAG00000059371) #15	C2 (ENSMFAG00000002495) #16	ZBTB12 (ENSMFAG00000010877) #17	EHMT2 (ENSMFAG00000032125) #18	SLC44A4 (ENSMFAG00000041119) #19	NEU1 (ENSMFAG00000046189) #20	ENSMFAG00000053423	ENSMFAG00000039068 #21	HSPA1L (ENSMFAG00000000455) #22	LSM2 (ENSMFAG00000001016) #23	VARS1 (ENSMFAG00000001032) #24	SAPCD1 (ENSMFAG00000054453) #26	VWA7 (ENSMFAG00000039665) #25	ENSMFAG00000000084	MSH5 (ENSMFAG00000033904) #27	ENSMFAG00000032315 #28	DDAH2 (ENSMFAG00000035624) #29	MPIG6B (ENSMFAG00000036544) #30	LY6G6C (ENSMFAG00000062054) #31	ENSMFAG00000053234 #32	ENSMFAG00000032622 #33	LY6G6F (ENSMFAG00000042838) ##32	ABHD16A (ENSMFAG00000000198) #35	PRRC2A (ENSMFAG00000000720)
Vervet Monkey	MODERN SPECIES	8	FKBPL (ENSCSAG00000019309)	ATF6B (ENSCSAG00000009237) #7	TNXB (ENSCSAG00000009220) #8	CYP21A2 (ENSCSAG00000009155) #9	ENSCSAG00000009110 #10	STK19 (ENSCSAG00000009027) #11	DXO (ENSCSAG00000009007) #12	SKIC2 (ENSCSAG00000008988) #13	NELFE (ENSCSAG00000008969) #14	CFB (ENSCSAG00000008908) #15	EHMT2 (ENSCSAG00000008851) #18	SLC44A4 (ENSCSAG00000008833) #19	NEU1 (ENSCSAG00000008815) #20	ENSCSAG00000008807	ENSCSAG00000019310 #21	HSPA1L (ENSCSAG00000019311) #22	LSM2 (ENSCSAG00000008800) #23	VARS1 (ENSCSAG00000008784) #24	VWA7 (ENSCSAG00000008740) #25	SAPCD1 (ENSCSAG00000008729) #26	MSH5 (ENSCSAG00000008713) #27	CLIC1 (ENSCSAG00000008687) #28	DDAH2 (ENSCSAG00000008675) #29	MPIG6B (ENSCSAG00000008668) #30	LY6G6C (ENSCSAG00000008659) #31	LY6G6F (ENSCSAG00000008648) ##32	ABHD16A (ENSCSAG00000008633) #35	LY6G5C (ENSCSAG00000008618) #36	CSNK2B (ENSCSAG00000008597)	GPANK1 (ENSCSAG00000008570)	NFKBIL1 (ENSCSAG00000008537)
Rhinopithecus	ANCESTRAL SPECIES	123					ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917.c #14	ENSGT00940000158605.fb #15	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00390000012976.c.b.b.b.a.b.c.b	ENSGT00610000087497	ENSGT00940000162096 #22	ENSGT00390000016597.q.a #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00900000143760	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.a.b ##32	ENSGT00390000007175 #33	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Golden snub-nosed monkey	DUPLICATION
Golden snub-nosed monkey	MODERN SPECIES	2414				ENSRROG00000033067	ENSRROG00000042148 #10	STK19 (ENSRROG00000040538) #11	DXO (ENSRROG00000035555) #12	SKIC2 (ENSRROG00000036429) #13	NELFE (ENSRROG00000041993) #14	CFB (ENSRROG00000031058) #15	EHMT2 (ENSRROG00000028913) #18	SLC44A4 (ENSRROG00000030634) #19	NEU1 (ENSRROG00000023915) #20	ENSRROG00000028785	ENSRROG00000045141	ENSRROG00000001634 #22	LSM2 (ENSRROG00000030345) #23	VARS1 (ENSRROG00000045490) #24	VWA7 (ENSRROG00000042330) #25	SAPCD1 (ENSRROG00000033563) #26	MSH5 (ENSRROG00000033293) #27	CLIC1 (ENSRROG00000024225) #28	DDAH2 (ENSRROG00000033495) #29	MPIG6B (ENSRROG00000043021) #30	LY6G6C (ENSRROG00000031504) #31	LY6G6F (ENSRROG00000034734) ##32	ENSRROG00000009336 #33	ENSRROG00000040885
Golden snub-nosed monkey	MODERN SPECIES	527																ENSRROG00000039404 #22
Black snub-nosed monkey	MODERN SPECIES	2001						STK19 (ENSRBIG00000031144) #11	DXO (ENSRBIG00000044693) #12	SKIC2 (ENSRBIG00000035485) #13	ENSRBIG00000028593 #14	CFB (ENSRBIG00000027009) #15	EHMT2 (ENSRBIG00000039842) #18	SLC44A4 (ENSRBIG00000030820) #19	NEU1 (ENSRBIG00000034622) #20	ENSRBIG00000042220	ENSRBIG00000031960	HSPA1L (ENSRBIG00000009659) #22	LSM2 (ENSRBIG00000010172) #23	VARS1 (ENSRBIG00000041669) #24	VWA7 (ENSRBIG00000039101) #25	SAPCD1 (ENSRBIG00000044186) #26	ENSRBIG00000004381	MSH5 (ENSRBIG00000027560) #27	CLIC1 (ENSRBIG00000042159) #28	DDAH2 (ENSRBIG00000023949) #29	MPIG6B (ENSRBIG00000041565) #30	LY6G6C (ENSRBIG00000039417) #31	LY6G6F (ENSRBIG00000028754) ##32	ENSRBIG00000005265 #33	ABHD16A (ENSRBIG00000016129) #35	LY6G5C (ENSRBIG00000044843) #36	LY6G5B (ENSRBIG00000037477) #37
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Cebidae	ANCESTRAL SPECIES	39	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Cebidae_a	ANCESTRAL SPECIES	80	ENSGT00920000149187	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708.eb.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Capuchin	MODERN SPECIES	24	ATF6B (ENSCCAG00000023021) #7	TNXB (ENSCCAG00000027168) #8	CYP21A2 (ENSCCAG00000024263) #9	ENSCCAG00000028298 #10	STK19 (ENSCCAG00000026720) #11	DXO (ENSCCAG00000036575) #12	SKIV2L (ENSCCAG00000026206) #13	NELFE (ENSCCAG00000014945) #14	CFB (ENSCCAG00000035631) #15	C2 (ENSCCAG00000028748) #16	ZBTB12 (ENSCCAG00000019304) #17	EHMT2 (ENSCCAG00000035929) #18	SLC44A4 (ENSCCAG00000024839) #19	NEU1 (ENSCCAG00000026584) #20	ENSCCAG00000027280	HSPA1L (ENSCCAG00000001666) #22	LSM2 (ENSCCAG00000024276) #23	VARS1 (ENSCCAG00000035656) #24	VWA7 (ENSCCAG00000017708) #25	ENSCCAG00000026876	SAPCD1 (ENSCCAG00000037431) #26	MSH5 (ENSCCAG00000034064) #27	ENSCCAG00000030637 #28	DDAH2 (ENSCCAG00000033427) #29	MPIG6B (ENSCCAG00000019265) #30	LY6G6C (ENSCCAG00000030503) #31	LY6G6D (ENSCCAG00000034557) #32	ENSCCAG00000031979 #33	LY6G6F (ENSCCAG00000021945) ##32	ABHD16A (ENSCCAG00000030782) #35	LY6G5C (ENSCCAG00000029153) #36
Mas night monkey	MODERN SPECIES	1139	ATF6B (ENSANAG00000036852) #7	TNXB (ENSANAG00000037382) #8	CYP21A2 (ENSANAG00000022107) #9	ENSANAG00000023102 #10	STK19 (ENSANAG00000035126) #11	DXO (ENSANAG00000020757) #12	SKIC2 (ENSANAG00000037992) #13	NELFE (ENSANAG00000038256) #14	CFB (ENSANAG00000024762) #15	C2 (ENSANAG00000029092) #16	ZBTB12 (ENSANAG00000019564) #17	EHMT2 (ENSANAG00000025041) #18	SLC44A4 (ENSANAG00000025696) #19	NEU1 (ENSANAG00000031154) #20	ENSANAG00000029391	HSPA1L (ENSANAG00000017246) #22	LSM2 (ENSANAG00000028372) #23	VARS1 (ENSANAG00000015453) #24	VWA7 (ENSANAG00000030320) #25	SAPCD1 (ENSANAG00000025920) #26	MSH5 (ENSANAG00000029188) #27	CLIC1 (ENSANAG00000032280) #28	DDAH2 (ENSANAG00000038278) #29	MPIG6B (ENSANAG00000023599) #30	LY6G6C (ENSANAG00000033037) #31	ENSANAG00000033731 #32	ENSANAG00000031985 #33	LY6G6F (ENSANAG00000035531) ##32	ABHD16A (ENSANAG00000024153) #35	LY6G5C (ENSANAG00000027649) #36	ENSANAG00000009490
Tarsier	MODERN SPECIES	1090																HSPA1L (ENSTSYG00000026198) #22	LSM2 (ENSTSYG00000034844) #23	VARS (ENSTSYG00000001567) #24
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459.a #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215.n #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459.a #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215.n #21	ENSGT00940000161215.m #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Mouse lemur	MODERN SPECIES	28	ATF6B (ENSMICG00000047519) #7	ENSMICG00000016667 #8	ENSMICG00000046247 #8	CYP21A2 (ENSMICG00000016652) #9	ENSMICG00000016626 #10	STK19 (ENSMICG00000016610) #11	DXO (ENSMICG00000016605) #12	SKIC2 (ENSMICG00000046331) #13	NELFE (ENSMICG00000003287) #14	CFB (ENSMICG00000043004) #15	C2 (ENSMICG00000003602) #16	ZBTB12 (ENSMICG00000003600) #17	EHMT2 (ENSMICG00000003583) #18	SLC44A4 (ENSMICG00000044872) #19	NEU1 (ENSMICG00000003563) #20	HSPA1L (ENSMICG00000026585) #22	LSM2 (ENSMICG00000046764) #23	ENSMICG00000034824 #23	VARS1 (ENSMICG00000003548) #24	VWA7 (ENSMICG00000003535) #25	SAPCD1 (ENSMICG00000030120) #26	MSH5 (ENSMICG00000003523) #27	CLIC1 (ENSMICG00000033421) #28	DDAH2 (ENSMICG00000036019) #29	MPIG6B (ENSMICG00000036583) #30	LY6G6C (ENSMICG00000031779) #31	ENSMICG00000012720 #33	LY6G6F (ENSMICG00000028884) ##32	ABHD16A (ENSMICG00000005816) #35	LY6G5C (ENSMICG00000045037) #36	LY6G5B (ENSMICG00000043933) #37
Lemuriformes_a	ANCESTRAL SPECIES	76	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459.a #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215.n #21	ENSGT00940000161215.m #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Greater bamboo lemur	MODERN SPECIES	805	ENSPSMG00000020099 #8	CYP21A2 (ENSPSMG00000020058) #9	ENSPSMG00000019797 #10	STK19 (ENSPSMG00000019401) #11	DXO (ENSPSMG00000019388) #12	SKIC2 (ENSPSMG00000019200) #13	NELFE (ENSPSMG00000019060) #14	CFB (ENSPSMG00000018848) #15	ZBTB12 (ENSPSMG00000018713) #17	EHMT2 (ENSPSMG00000018654) #18	SLC44A4 (ENSPSMG00000018499) #19	NEU1 (ENSPSMG00000018471) #20	ENSPSMG00000018399 #21	ENSPSMG00000018374	ENSPSMG00000018369 #21	HSPA1L (ENSPSMG00000018352) #22	LSM2 (ENSPSMG00000018346) #23	VARS1 (ENSPSMG00000018332) #24	VWA7 (ENSPSMG00000018308) #25	ENSPSMG00000018285	SAPCD1 (ENSPSMG00000018279) #26	MSH5 (ENSPSMG00000018256) #27	CLIC1 (ENSPSMG00000018200) #28	DDAH2 (ENSPSMG00000018176) #29	MPIG6B (ENSPSMG00000018151) #30	LY6G6C (ENSPSMG00000018106) #31	LY6G6F (ENSPSMG00000018087) ##32	ABHD16A (ENSPSMG00000018026) #35	LY6G5C (ENSPSMG00000017943) #36	LY6G5B (ENSPSMG00000017912) #37	GPANK1 (ENSPSMG00000017812)
Coquerels sifaka	MODERN SPECIES	576	ATF6B (ENSPCOG00000020781) #7	TNXB (ENSPCOG00000021738) #8	CYP21A2 (ENSPCOG00000026091) #9	ENSPCOG00000023318 #10	STK19 (ENSPCOG00000016856) #11	DXO (ENSPCOG00000016641) #12	SKIC2 (ENSPCOG00000010308) #13	NELFE (ENSPCOG00000024944) #14	CFB (ENSPCOG00000027745) #15	C2 (ENSPCOG00000018194) #16	ZBTB12 (ENSPCOG00000013160) #17	EHMT2 (ENSPCOG00000012310) #18	SLC44A4 (ENSPCOG00000025102) #19	NEU1 (ENSPCOG00000016799) #20	ENSPCOG00000016806	HSPA1L (ENSPCOG00000013421) #22	LSM2 (ENSPCOG00000020134) #23	VARS1 (ENSPCOG00000010942) #24	VWA7 (ENSPCOG00000028056) #25	SAPCD1 (ENSPCOG00000017625) #26	MSH5 (ENSPCOG00000022829) #27	CLIC1 (ENSPCOG00000025628) #28	DDAH2 (ENSPCOG00000020625) #29	MPIG6B (ENSPCOG00000024968) #30	LY6G6C (ENSPCOG00000016840) #31	LY6G6D (ENSPCOG00000026710) #32	ENSPCOG00000017500 #33	LY6G6F (ENSPCOG00000021015) ##32	ABHD16A (ENSPCOG00000025650) #35	LY6G5C (ENSPCOG00000016834) #36	LY6G5B (ENSPCOG00000021893) #37
Bushbaby	MODERN SPECIES	146	ATF6B (ENSOGAG00000032721) #7	TNXB (ENSOGAG00000009624) #8	CYP21A2 (ENSOGAG00000009619) #9	ENSOGAG00000009603 #10	STK19 (ENSOGAG00000009593) #11	DXO (ENSOGAG00000009590) #12	SKIC2 (ENSOGAG00000009578) #13	NELFE (ENSOGAG00000009574) #14	CFB (ENSOGAG00000009568) #15	ZBTB12 (ENSOGAG00000031042) #17	EHMT2 (ENSOGAG00000014177) #18	SLC44A4 (ENSOGAG00000014170) #19	NEU1 (ENSOGAG00000014167) #20	ENSOGAG00000030529 #21	ENSOGAG00000030117 #21	HSPA1L (ENSOGAG00000014154) #22	VARS1 (ENSOGAG00000007515) #24	VWA7 (ENSOGAG00000024868) #25	MSH5 (ENSOGAG00000010314) #27	CLIC1 (ENSOGAG00000031840) #28	DDAH2 (ENSOGAG00000010311) #29	MPIG6B (ENSOGAG00000010301) #30	LY6G6C (ENSOGAG00000031312) #31	ENSOGAG00000025486	LY6G6F (ENSOGAG00000010286) ##32	ABHD16A (ENSOGAG00000010282) #35	LY6G5C (ENSOGAG00000027034) #36	LY6G5B (ENSOGAG00000030754) #37	CSNK2B (ENSOGAG00000010278)	GPANK1 (ENSOGAG00000010276)	APOM (ENSOGAG00000028143)
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00390000006516	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000015960.a.a.b ##32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.a.b ##32	ENSGT00940000160908 #35
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Common shrew	MODERN SPECIES	9538																HSPA1L (ENSSARG00000007900) #22
Hedgehog	MODERN SPECIES	11057																HSPA1L (ENSEEUG00000008014) #22
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00390000006516	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Artiodactyla	ANCESTRAL SPECIES	15	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Suina	ANCESTRAL SPECIES	17	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Pig	MODERN SPECIES	15	ATF6B (ENSSSCG00000001430) #7	TNXB (ENSSSCG00000023611) #8	CYP21A2 (ENSSSCG00000001428) #9	C4A (ENSSSCG00000001427) #10	STK19 (ENSSSCG00000001426) #11	DXO (ENSSSCG00000001425) #12	SKIC2 (ENSSSCG00000001424) #13	NELFE (ENSSSCG00000001423) #14	CFB (ENSSSCG00000024914) #15	C2 (ENSSSCG00000001422) #16	ZBTB12 (ENSSSCG00000001421) #17	EHMT2 (ENSSSCG00000001420) #18	SLC44A4 (ENSSSCG00000001419) #19	NEU1 (ENSSSCG00000001418) #20	ENSSSCG00000029160 #21	HSPA1L (ENSSSCG00000030368) #22	LSM2 (ENSSSCG00000039021) #23	VARS1 (ENSSSCG00000038950) #24	VWA7 (ENSSSCG00000036796) #25	SAPCD1 (ENSSSCG00000061053) #26	MSH5 (ENSSSCG00000035596) #27	ENSSSCG00000039071 #28	DDAH2 (ENSSSCG00000038514) #29	MPIG6B (ENSSSCG00000034664) #30	LY6G6C (ENSSSCG00000036566) #31	LY6G6D (ENSSSCG00000060949) #32	ENSSSCG00000040885 #33	LY6G6F (ENSSSCG00000033590) ##32	ABHD16A (ENSSSCG00000034923) #35	LY6G5C (ENSSSCG00000001416) #36	LY6G5B (ENSSSCG00000062414) #37
Chacoan peccary	MODERN SPECIES	782	ATF6B (ENSCWAG00000018282) #7	TNXB (ENSCWAG00000018517) #8	CYP21A2 (ENSCWAG00000019083) #9	ENSCWAG00000019207 #10	STK19 (ENSCWAG00000019629) #11	DXO (ENSCWAG00000019694) #12	SKIC2 (ENSCWAG00000019717) #13	NELFE (ENSCWAG00000019802) #14	CFB (ENSCWAG00000019872) #15	C2 (ENSCWAG00000019961) #16	ZBTB12 (ENSCWAG00000020206) #17	EHMT2 (ENSCWAG00000020250) #18	SLC44A4 (ENSCWAG00000020510) #19	NEU1 (ENSCWAG00000020642) #20	ENSCWAG00000020668 #21	HSPA1L (ENSCWAG00000003666) #22	LSM2 (ENSCWAG00000003683) #23	VARS1 (ENSCWAG00000003706) #24	VWA7 (ENSCWAG00000003764) #25	ENSCWAG00000003822	SAPCD1 (ENSCWAG00000003859) #26	MSH5 (ENSCWAG00000003925) #27	CLIC1 (ENSCWAG00000004210) #28	DDAH2 (ENSCWAG00000004235) #29	MPIG6B (ENSCWAG00000004278) #30	LY6G6C (ENSCWAG00000004498) #31	ENSCWAG00000004529	ENSCWAG00000004566 #33	LY6G6F (ENSCWAG00000004637) ##32	ABHD16A (ENSCWAG00000004679) #35	LY6G5C (ENSCWAG00000004790) #36
Artiodactyla_a	ANCESTRAL SPECIES	19	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Camelidae	ANCESTRAL SPECIES	13	ENSGT00920000149187	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Alpaca	MODERN SPECIES	4324																ENSVPAG00000010721 #22
Arabian camel	MODERN SPECIES	12	ATF6B (ENSCDRG00005021251) #7	ENSCDRG00005021242 #8	ENSCDRG00005021235 #8	CYP21A2 (ENSCDRG00005021227) #9	ENSCDRG00005013954 #10	STK19 (ENSCDRG00005013204) #11	DXO (ENSCDRG00005013148) #12	SKIC2 (ENSCDRG00005012836) #13	NELFE (ENSCDRG00005012632) #14	CFB (ENSCDRG00005012567) #15	C2 (ENSCDRG00005011879) #16	EHMT2 (ENSCDRG00005010474) #18	SLC44A4 (ENSCDRG00005009940) #19	NEU1 (ENSCDRG00005009842) #20	ENSCDRG00005009752 #21	HSPA1L (ENSCDRG00005009726) #22	LSM2 (ENSCDRG00005009650) #23	VARS1 (ENSCDRG00005009449) #24	VWA7 (ENSCDRG00005009323) #25	SAPCD1 (ENSCDRG00005009171) #26	MSH5 (ENSCDRG00005008921) #27	CLIC1 (ENSCDRG00005008844) #28	DDAH2 (ENSCDRG00005020427) #29	MPIG6B (ENSCDRG00005020398) #30	LY6G6C (ENSCDRG00005020392) #31	LY6G6D (ENSCDRG00005020378) #32	ENSCDRG00005020367 #33	LY6G6F (ENSCDRG00005020359) ##32	ABHD16A (ENSCDRG00005020342) #35	LY6G5C (ENSCDRG00005020334) #36	LY6G5B (ENSCDRG00005020329) #37
Artiodactyla_b	ANCESTRAL SPECIES	15	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Pecora	ANCESTRAL SPECIES	21	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT01010000225285	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Yarkand deer	MODERN SPECIES	30	PRRT1 (ENSCHYG00000002421)	FKBPL (ENSCHYG00000002435)	ATF6B (ENSCHYG00000002484) #7	ENSCHYG00000002680 #8	ENSCHYG00000002703 #8	STK19 (ENSCHYG00000002722) #11	DXO (ENSCHYG00000002741) #12	SKIC2 (ENSCHYG00000002793) #13	NELFE (ENSCHYG00000002920) #14	CFB (ENSCHYG00000002990) #15	C2 (ENSCHYG00000003048) #16	ZBTB12 (ENSCHYG00000003144) #17	EHMT2 (ENSCHYG00000003209) #18	SLC44A4 (ENSCHYG00000003430) #19	NEU1 (ENSCHYG00000003513) #20	HSPA1L (ENSCHYG00000003544) #22	LSM2 (ENSCHYG00000003554) #23	VARS1 (ENSCHYG00000003595) #24	VWA7 (ENSCHYG00000003797) #25	SAPCD1 (ENSCHYG00000003856) #26	ENSCHYG00000003888	MSH5 (ENSCHYG00000003905) #27	CLIC1 (ENSCHYG00000003940) #28	DDAH2 (ENSCHYG00000003968) #29	ENSCHYG00000004019 #30	ENSCHYG00000004094 #32	ENSCHYG00000004101 #33	LY6G6F (ENSCHYG00000004155) ##32	ABHD16A (ENSCHYG00000004122) #35	LY6G5C (ENSCHYG00000004169) #36	LY6G5B (ENSCHYG00000004177) #37
Percora_a	ANCESTRAL SPECIES	12	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00950000185097.b	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT01010000225285	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Siberian musk deer	MODERN SPECIES	355	CYP21A2 (ENSMMSG00000009963) #9	ENSMMSG00000010458 #10	STK19 (ENSMMSG00000014515) #11	DXO (ENSMMSG00000014558) #12	SKIC2 (ENSMMSG00000014624) #13	NELFE (ENSMMSG00000014969) #14	CFB (ENSMMSG00000015076) #15	C2 (ENSMMSG00000015140) #16	ZBTB12 (ENSMMSG00000015434) #17	EHMT2 (ENSMMSG00000015492) #18	SLC44A4 (ENSMMSG00000015784) #19	NEU1 (ENSMMSG00000015841) #20	ENSMMSG00000015888	ENSMMSG00000015911 #21	ENSMMSG00000015929 #21	HSPA1L (ENSMMSG00000015950) #22	ENSMMSG00000015966 #23	VARS1 (ENSMMSG00000016074) #24	VWA7 (ENSMMSG00000016221) #25	SAPCD1 (ENSMMSG00000016304) #26	MSH5 (ENSMMSG00000016363) #27	CLIC1 (ENSMMSG00000016415) #28	DDAH2 (ENSMMSG00000016445) #29	ENSMMSG00000016480 #30	LY6G6C (ENSMMSG00000016576) #31	ENSMMSG00000016617 #32	ENSMMSG00000016665 #33	LY6G6F (ENSMMSG00000016691) ##32	ABHD16A (ENSMMSG00000016753) #35	LY6G5C (ENSMMSG00000016897) #36	LY6G5B (ENSMMSG00000016938) #37
Bovidae	ANCESTRAL SPECIES	13	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739.m #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00950000185097.b	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT01010000225285	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Caprinae	ANCESTRAL SPECIES	16	ENSGT00940000155739.n #10	ENSGT00940000158338.g #9	ENSGT00940000155739.m #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00950000185097.b	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Rambouillet Sheep	MODERN SPECIES	12	ENSOARG00020009342 #9	ENSOARG00020009383 #10	STK19 (ENSOARG00020009501) #11	DXO (ENSOARG00020009576) #12	ENSOARG00020009635	NELFE (ENSOARG00020009711) #14	CFB (ENSOARG00020009870) #15	C2 (ENSOARG00020009981) #16	ZBTB12 (ENSOARG00020011099) #17	EHMT2 (ENSOARG00020011157) #18	SLC44A4 (ENSOARG00020011938) #19	NEU1 (ENSOARG00020012464) #20	ENSOARG00020012575	HSPA1A (ENSOARG00020012603) #21	ENSOARG00020012622 #21	HSPA1L (ENSOARG00020012683) #22	LSM2 (ENSOARG00020012709) #23	VARS1 (ENSOARG00020012761) #24	VWA7 (ENSOARG00020012877) #25	SAPCD1 (ENSOARG00020013063) #26	MSH5 (ENSOARG00020013176) #27	CLIC1 (ENSOARG00020013786) #28	DDAH2 (ENSOARG00020013844) #29	MPIG6B (ENSOARG00020013921) #30	LY6G6C (ENSOARG00020014588) #31	LY6G6D (ENSOARG00020014636) #32	ENSOARG00020014696 #33	LY6G6F (ENSOARG00020014747) ##32	ABHD16A (ENSOARG00020014859) #35	LY6G5C (ENSOARG00020014941) #36	LY6G5B (ENSOARG00020014969) #37
Goat	MODERN SPECIES	15	CYP21A1 (ENSCHIG00000010531) #9	ENSCHIG00000022212 #9	ENSCHIG00000023354 #10	ENSCHIG00000021630 #10	STK19 (ENSCHIG00000006985) #11	DXO (ENSCHIG00000024555) #12	SKIC2 (ENSCHIG00000012897) #13	NELFE (ENSCHIG00000013713) #14	CFB (ENSCHIG00000022942) #15	C2 (ENSCHIG00000014396) #16	ZBTB12 (ENSCHIG00000007636) #17	EHMT2 (ENSCHIG00000013309) #18	SLC44A4 (ENSCHIG00000022933) #19	NEU1 (ENSCHIG00000011024) #20	ENSCHIG00000022355	HSPA1L (ENSCHIG00000022996) #22	LSM2 (ENSCHIG00000016153) #23	VARS1 (ENSCHIG00000011008) #24	VWA7 (ENSCHIG00000017352) #25	SAPCD1 (ENSCHIG00000018682) #26	MSH5 (ENSCHIG00000019852) #27	CLIC1 (ENSCHIG00000024330) #28	DDAH2 (ENSCHIG00000026752) #29	MPIG6B (ENSCHIG00000014942) #30	LY6G6C (ENSCHIG00000007675) #31	LY6G6D (ENSCHIG00000011869) #32	ENSCHIG00000015667 #33	LY6G6F (ENSCHIG00000020017) ##32	ABHD16A (ENSCHIG00000014665) #35	LY6G5C (ENSCHIG00000021696) #36	LY6G5B (ENSCHIG00000017460) #37
Bovinae	ANCESTRAL SPECIES	9	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739.m #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT01010000225285	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Bos	ANCESTRAL SPECIES	17	ENSGT00940000158338.e #9	ENSGT00940000155739.m.b #10	ENSGT00940000158338.f #9	ENSGT00940000155739.m.a #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Bos_a	ANCESTRAL SPECIES	11	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338.e #9	ENSGT00940000155739.m.a #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Domestic yak	MODERN SPECIES	16	FKBPL (ENSBGRG00000015529)	ATF6B (ENSBGRG00000026072) #7	CYP21A2 (ENSBGRG00000025952) #9	ENSBGRG00000021276 #10	STK19 (ENSBGRG00000021014) #11	DXO (ENSBGRG00000020987) #12	SKIC2 (ENSBGRG00000020707) #13	NELFE (ENSBGRG00000020576) #14	CFB (ENSBGRG00000020465) #15	C2 (ENSBGRG00000019750) #16	ZBTB12 (ENSBGRG00000019708) #17	EHMT2 (ENSBGRG00000018575) #18	SLC44A4 (ENSBGRG00000017713) #19	NEU1 (ENSBGRG00000017601) #20	ENSBGRG00000017349 #21	HSPA1L (ENSBGRG00000017307) #22	ENSBGRG00000017265 #23	VARS1 (ENSBGRG00000017116) #24	VWA7 (ENSBGRG00000016565) #25	ENSBGRG00000016515	SAPCD1 (ENSBGRG00000016355) #26	MSH5 (ENSBGRG00000016250) #27	CLIC1 (ENSBGRG00000016105) #28	DDAH2 (ENSBGRG00000016025) #29	MPIG6B (ENSBGRG00000015302) #30	LY6G6C (ENSBGRG00000015197) #31	LY6G6D (ENSBGRG00000015149) #32	ENSBGRG00000015047 #33	LY6G6F (ENSBGRG00000014933) ##32	ABHD16A (ENSBGRG00000014683) #35	LY6G5C (ENSBGRG00000014635) #36
Wild yak	MODERN SPECIES	1620																HSPA1L (ENSBMUG00000014712) #22	LSM2 (ENSBMUG00000014702) #23	VARS1 (ENSBMUG00000014682) #24	VWA7 (ENSBMUG00000014638) #25	SAPCD1 (ENSBMUG00000014622) #26	MSH5 (ENSBMUG00000014578) #27	CLIC1 (ENSBMUG00000014520) #28	DDAH2 (ENSBMUG00000014500) #29	MPIG6B (ENSBMUG00000014463) #30	LY6G6C (ENSBMUG00000014340) #31	ENSBMUG00000014328 #32	ENSBMUG00000014295 #33	LY6G6F (ENSBMUG00000014276) ##32	ABHD16A (ENSBMUG00000014247) #35	LY6G5C (ENSBMUG00000014189) #36	LY6G5B (ENSBMUG00000014177) #37
Bos_b	ANCESTRAL SPECIES	8	ENSGT00940000158338.e #9	ENSGT00940000155739.m.b #10	ENSGT00940000158338.f #9	ENSGT00940000155739.m.a #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Cow	MODERN SPECIES	15	CYP21A2 (ENSBTAG00000047039) #9	ENSBTAG00000006864 #10	CYP21A1P (ENSBTAG00000001443) #9	C4A (ENSBTAG00000037533) #10	STK19 (ENSBTAG00000005589) #11	DXO (ENSBTAG00000005588) #12	SKIC2 (ENSBTAG00000005587) #13	NELFE (ENSBTAG00000007453) #14	CFB (ENSBTAG00000046158) #15	C2 (ENSBTAG00000007450) #16	ZBTB12 (ENSBTAG00000032031) #17	EHMT2 (ENSBTAG00000005676) #18	SLC44A4 (ENSBTAG00000005675) #19	NEU1 (ENSBTAG00000005674) #20	HSPA1A (ENSBTAG00000025441) #21	HSPA1L (ENSBTAG00000025442) #22	LSM2 (ENSBTAG00000005634) #23	VARS1 (ENSBTAG00000005631) #24	VWA7 (ENSBTAG00000005630) #25	SAPCD1 (ENSBTAG00000039620) #26	MSH5 (ENSBTAG00000019790) #27	CLIC1 (ENSBTAG00000013533) #28	DDAH2 (ENSBTAG00000013530) #29	MPIG6B (ENSBTAG00000013525) #30	LY6G6C (ENSBTAG00000000585) #31	LY6G6D (ENSBTAG00000053561) #32	LY6G6E (ENSBTAG00000000582) #33	LY6G6F (ENSBTAG00000000580) ##32	ABHD16A (ENSBTAG00000000578) #35	LY6G5C (ENSBTAG00000025449) #36	LY6G5B (ENSBTAG00000039740) #37
Hybrid Bos Indicus	MODERN SPECIES	15	ENSBIXG00005021205 #10	ENSBIXG00005003217	ENSBIXG00005019660 #10	STK19 (ENSBIXG00005019611) #11	DXO (ENSBIXG00005019570) #12	SKIC2 (ENSBIXG00005019516) #13	NELFE (ENSBIXG00005019408) #14	CFB (ENSBIXG00005003136) #15	C2 (ENSBIXG00005019243) #16	ZBTB12 (ENSBIXG00005019019) #17	EHMT2 (ENSBIXG00005018977) #18	SLC44A4 (ENSBIXG00005018846) #19	NEU1 (ENSBIXG00005018604) #20	ENSBIXG00005018581	ENSBIXG00005006512 #21	HSPA1L (ENSBIXG00005005515) #22	LSM2 (ENSBIXG00005018478) #23	VARS1 (ENSBIXG00005018440) #24	VWA7 (ENSBIXG00005018337) #25	SAPCD1 (ENSBIXG00005018319) #26	MSH5 (ENSBIXG00005018264) #27	CLIC1 (ENSBIXG00005018075) #28	DDAH2 (ENSBIXG00005018047) #29	MPIG6B (ENSBIXG00005018006) #30	LY6G6C (ENSBIXG00005017788) #31	LY6G6F (ENSBIXG00005017752) ##32	ENSBIXG00005017698 #33	ABHD16A (ENSBIXG00005017656) #35	LY6G5C (ENSBIXG00005017571) #36	LY6G5B (ENSBIXG00005017415) #37	CSNK2B (ENSBIXG00005017519)
American bison	MODERN SPECIES	2855						ENSBBBG00000016686	STK19 (ENSBBBG00000000723) #11	DXO (ENSBBBG00000008507) #12	SKIC2 (ENSBBBG00000016993) #13	CFB (ENSBBBG00000017044) #15	C2 (ENSBBBG00000017192) #16	ZBTB12 (ENSBBBG00000017222) #17	EHMT2 (ENSBBBG00000017444) #18	SLC44A4 (ENSBBBG00000004359) #19	NEU1 (ENSBBBG00000017602) #20	HSPA1L (ENSBBBG00000017626) #22	LSM2 (ENSBBBG00000017635) #23	VARS1 (ENSBBBG00000017661) #24	VWA7 (ENSBBBG00000017695) #25	SAPCD1 (ENSBBBG00000017720) #26	ENSBBBG00000017722	MSH5 (ENSBBBG00000004388) #27	CLIC1 (ENSBBBG00000017854) #28	DDAH2 (ENSBBBG00000017876) #29	MPIG6B (ENSBBBG00000017879) #30	LY6G6C (ENSBBBG00000007580) #31	ENSBBBG00000017895 #32	ENSBBBG00000017900 #33	LY6G6F (ENSBBBG00000017908) ##32	ABHD16A (ENSBBBG00000017936) #35	LY6G5C (ENSBBBG00000017944) #36
Cetacea	ANCESTRAL SPECIES	7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Blue whale	MODERN SPECIES	2	CYP21A2 (ENSBMSG00010022029) #9	ENSBMSG00010019596 #10	STK19 (ENSBMSG00010018908) #11	DXO (ENSBMSG00010018892) #12	SKIC2 (ENSBMSG00010018842) #13	NELFE (ENSBMSG00010018730) #14	CFB (ENSBMSG00010018659) #15	C2 (ENSBMSG00010018380) #16	ZBTB12 (ENSBMSG00010018319) #17	EHMT2 (ENSBMSG00010018022) #18	SLC44A4 (ENSBMSG00010017609) #19	NEU1 (ENSBMSG00010017545) #20	ENSBMSG00010017521 #21	ENSBMSG00010017486 #21	ENSBMSG00010017443 #21	HSPA1L (ENSBMSG00010017435) #22	LSM2 (ENSBMSG00010017420) #23	VARS1 (ENSBMSG00010017361) #24	VWA7 (ENSBMSG00010017271) #25	SAPCD1 (ENSBMSG00010017235) #26	MSH5 (ENSBMSG00010016985) #27	CLIC1 (ENSBMSG00010016956) #28	DDAH2 (ENSBMSG00010016929) #29	MPIG6B (ENSBMSG00010016519) #30	LY6G6C (ENSBMSG00010016444) #31	LY6G6D (ENSBMSG00010016411) #32	ENSBMSG00010016395	LY6G6F (ENSBMSG00010016361) ##32	ABHD16A (ENSBMSG00010016259) #35	LY6G5C (ENSBMSG00010016217) #36	LY6G5B (ENSBMSG00010016187) #37
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Sperm whale	MODERN SPECIES	9	ENSPCTG00005006895 #8	CYP21A2 (ENSPCTG00005006933) #9	ENSPCTG00005007209 #10	STK19 (ENSPCTG00005007999) #11	DXO (ENSPCTG00005008018) #12	SKIV2L (ENSPCTG00005008068) #13	NELFE (ENSPCTG00005008264) #14	CFB (ENSPCTG00005008443) #15	C2 (ENSPCTG00005008601) #16	ZBTB12 (ENSPCTG00005008961) #17	EHMT2 (ENSPCTG00005009060) #18	SLC44A4 (ENSPCTG00005010010) #19	NEU1 (ENSPCTG00005010808) #20	ENSPCTG00005010895 #21	ENSPCTG00005010915 #21	HSPA1L (ENSPCTG00005010962) #22	ENSPCTG00005010979 #23	VARS (ENSPCTG00005011043) #24	VWA7 (ENSPCTG00005011234) #25	SAPCD1 (ENSPCTG00005011374) #26	MSH5 (ENSPCTG00005011491) #27	CLIC1 (ENSPCTG00005011586) #28	DDAH2 (ENSPCTG00005011628) #29	MPIG6B (ENSPCTG00005011700) #30	LY6G6C (ENSPCTG00005012139) #31	ENSPCTG00005012184 #32	ENSPCTG00005012276 #33	LY6G6F (ENSPCTG00005012296) ##32	ABHD16A (ENSPCTG00005012381) #35	LY6G5C (ENSPCTG00005012457) #36	LY6G5B (ENSPCTG00005012495) #37
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Dolphin	MODERN SPECIES	2748											EHMT2 (ENSTTRG00000014148) #18	SLC44A4 (ENSTTRG00000014144) #19	NEU1 (ENSTTRG00000014142) #20	ENSTTRG00000014139	ENSTTRG00000014138 #21	HSPA1L (ENSTTRG00000014132) #22	LSM2 (ENSTTRG00000014131) #23	VARS1 (ENSTTRG00000014128) #24	VWA7 (ENSTTRG00000014125) #25	SAPCD1 (ENSTTRG00000014124) #26	MSH5 (ENSTTRG00000014113) #27	CLIC1 (ENSTTRG00000014110) #28	DDAH2 (ENSTTRG00000014108) #29	MPIG6B (ENSTTRG00000014107) #30	LY6G6C (ENSTTRG00000014106) #31	ABHD16A (ENSTTRG00000014105) #35	ENSTTRG00000014104 #36	CSNK2B (ENSTTRG00000014103)	GPANK1 (ENSTTRG00000014102)	CUNH6orf47 (ENSTTRG00000014101)	APOM (ENSTTRG00000014100)
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00900000143760	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36
Vaquita	MODERN SPECIES	2	ATF6B (ENSPSNG00000016300) #7	TNXB (ENSPSNG00000016562) #8	CYP21A2 (ENSPSNG00000016707) #9	ENSPSNG00000017716 #10	STK19 (ENSPSNG00000022076) #11	DXO (ENSPSNG00000022097) #12	SKIC2 (ENSPSNG00000022137) #13	NELFE (ENSPSNG00000022223) #14	CFB (ENSPSNG00000022253) #15	C2 (ENSPSNG00000022293) #16	ZBTB12 (ENSPSNG00000022317) #17	EHMT2 (ENSPSNG00000022340) #18	SLC44A4 (ENSPSNG00000022406) #19	NEU1 (ENSPSNG00000022443) #20	ENSPSNG00000022462 #21	HSPA1L (ENSPSNG00000022467) #22	ENSPSNG00000022469 #23	VARS1 (ENSPSNG00000022482) #24	VWA7 (ENSPSNG00000022500) #25	ENSPSNG00000022510	SAPCD1 (ENSPSNG00000022514) #26	MSH5 (ENSPSNG00000022523) #27	DDAH2 (ENSPSNG00000022530) #29	MPIG6B (ENSPSNG00000022539) #30	LY6G6C (ENSPSNG00000022555) #31	ENSPSNG00000022557 #32	ENSPSNG00000022559 #33	LY6G6F (ENSPSNG00000022561) ##32	ABHD16A (ENSPSNG00000022566) #35	LY6G5C (ENSPSNG00000022574) #36	LY6G5B (ENSPSNG00000022576) #37
Monodontidae	ANCESTRAL SPECIES	4	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT01030000235045	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Narwhal	MODERN SPECIES	310	ENSMMNG00015014694 #8	ENSMMNG00015014671 #8	CYP21A2 (ENSMMNG00015014640) #9	ENSMMNG00015014625	ENSMMNG00015014582 #10	STK19 (ENSMMNG00015014556) #11	DXO (ENSMMNG00015014547) #12	SKIC2 (ENSMMNG00015014510) #13	NELFE (ENSMMNG00015014463) #14	CFB (ENSMMNG00015014427) #15	C2 (ENSMMNG00015014376) #16	ZBTB12 (ENSMMNG00015014331) #17	EHMT2 (ENSMMNG00015014231) #18	SLC44A4 (ENSMMNG00015014161) #19	NEU1 (ENSMMNG00015014127) #20	HSPA1L (ENSMMNG00015014107) #22	ENSMMNG00015014100 #23	VARS1 (ENSMMNG00015014071) #24	VWA7 (ENSMMNG00015013234) #25	SAPCD1 (ENSMMNG00015013215) #26	MSH5 (ENSMMNG00015013174) #27	CLIC1 (ENSMMNG00015013149) #28	DDAH2 (ENSMMNG00015013128) #29	MPIG6B (ENSMMNG00015013061) #30	LY6G6C (ENSMMNG00015013009) #31	ENSMMNG00015012996 #32	ENSMMNG00015012988 #33	LY6G6F (ENSMMNG00015012977) ##32	ABHD16A (ENSMMNG00015012962) #35	LY6G5C (ENSMMNG00015012943) #36	LY6G5B (ENSMMNG00015012926) #37
Beluga whale	MODERN SPECIES	79	FKBPL (ENSDLEG00000018254)	ATF6B (ENSDLEG00000018231) #7	ENSDLEG00000018118 #8	CYP21A2 (ENSDLEG00000018038) #9	ENSDLEG00000017976 #10	STK19 (ENSDLEG00000017929) #11	DXO (ENSDLEG00000017864) #12	SKIV2L (ENSDLEG00000017811) #13	NELFE (ENSDLEG00000017728) #14	CFB (ENSDLEG00000016539) #15	ZBTB12 (ENSDLEG00000016456) #17	EHMT2 (ENSDLEG00000016419) #18	SLC44A4 (ENSDLEG00000016245) #19	NEU1 (ENSDLEG00000016223) #20	ENSDLEG00000016206 #21	HSPA1L (ENSDLEG00000016199) #22	ENSDLEG00000016191 #23	VARS (ENSDLEG00000016141) #24	VWA7 (ENSDLEG00000016096) #25	SAPCD1 (ENSDLEG00000016079) #26	MSH5 (ENSDLEG00000015373) #27	CLIC1 (ENSDLEG00000015325) #28	DDAH2 (ENSDLEG00000015311) #29	MPIG6B (ENSDLEG00000015272) #30	LY6G6C (ENSDLEG00000015263) #31	ENSDLEG00000015256 #33	LY6G6F (ENSDLEG00000015136) ##32	ABHD16A (ENSDLEG00000015115) #35	LY6G5B (ENSDLEG00000015077) #37	CSNK2B (ENSDLEG00000015070)	GPANK1 (ENSDLEG00000015063)
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00390000006516	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Carnivora	ANCESTRAL SPECIES	4	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00390000006516	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Caniformia	ANCESTRAL SPECIES	3	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00390000006516	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Ursidae	ANCESTRAL SPECIES	37	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769.b #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Ursus	ANCESTRAL SPECIES	97	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769.b #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Polar bear	MODERN SPECIES	469	ATF6B (ENSUMAG00000010185) #7	TNXB (ENSUMAG00000010555) #8	CYP21A2 (ENSUMAG00000010639) #9	ENSUMAG00000010912 #10	STK19 (ENSUMAG00000012636) #11	DXO (ENSUMAG00000012641) #12	SKIC2 (ENSUMAG00000012666) #13	NELFE (ENSUMAG00000012674) #14	CFB (ENSUMAG00000012679) #15	C2 (ENSUMAG00000012708) #16	EHMT2 (ENSUMAG00000012898) #18	SLC44A4 (ENSUMAG00000013388) #19	NEU1 (ENSUMAG00000013402) #20	ENSUMAG00000013416 #21	ENSUMAG00000013422 #21	HSPA1L (ENSUMAG00000013424) #22	LSM2 (ENSUMAG00000013425) #23	VARS1 (ENSUMAG00000013486) #24	ENSUMAG00000014071	MSH5 (ENSUMAG00000014085) #27	CLIC1 (ENSUMAG00000014118) #28	DDAH2 (ENSUMAG00000014121) #29	MPIG6B (ENSUMAG00000014122) #30	LY6G6C (ENSUMAG00000014123) #31	LY6G6D (ENSUMAG00000014128) #32	LY6G6F (ENSUMAG00000014129) ##32	ENSUMAG00000014132 #33	ENSUMAG00000014133	ENSUMAG00000014137 #35	ENSUMAG00000014142 #36	LY6G5B (ENSUMAG00000014144) #37
Giant Panda	MODERN SPECIES	15	ENSAMEG00000025736 #8	ENSAMEG00000002331 #8	CYP21A2 (ENSAMEG00000002318) #9	ENSAMEG00000002178 #10	STK19 (ENSAMEG00000002170) #11	DXO (ENSAMEG00000002151) #12	SKIC2 (ENSAMEG00000002078) #13	NELFE (ENSAMEG00000002062) #14	CFB (ENSAMEG00000001937) #15	C2 (ENSAMEG00000025602) #16	ZBTB12 (ENSAMEG00000012921) #17	EHMT2 (ENSAMEG00000012927) #18	SLC44A4 (ENSAMEG00000012956) #19	NEU1 (ENSAMEG00000013036) #20	ENSAMEG00000018827 #21	HSPA1L (ENSAMEG00000018815) #22	LSM2 (ENSAMEG00000006483) #23	VARS1 (ENSAMEG00000006417) #24	VWA7 (ENSAMEG00000006372) #25	SAPCD1 (ENSAMEG00000006366) #26	MSH5 (ENSAMEG00000009116) #27	CLIC1 (ENSAMEG00000009132) #28	DDAH2 (ENSAMEG00000009165) #29	MPIG6B (ENSAMEG00000009186) #30	LY6G6C (ENSAMEG00000009191) #31	LY6G6D (ENSAMEG00000026669) #32	ENSAMEG00000027940 #33	LY6G6F (ENSAMEG00000023986) ##32	ABHD16A (ENSAMEG00000009210) #35	LY6G5C (ENSAMEG00000009267) #36	ENSAMEG00000029887 #37
Mustelinae	ANCESTRAL SPECIES	96	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Ferret	MODERN SPECIES	536	PPT2 (ENSMPUG00000010278)	PRRT1 (ENSMPUG00000010287)	FKBPL (ENSMPUG00000018356)	ATF6B (ENSMPUG00000010305) #7	TNXB (ENSMPUG00000010312) #8	ENSMPUG00000010539 #10	DXO (ENSMPUG00000010562) #12	SKIC2 (ENSMPUG00000010567) #13	NELFE (ENSMPUG00000010581) #14	CFB (ENSMPUG00000010632) #15	ZBTB12 (ENSMPUG00000018357) #17	EHMT2 (ENSMPUG00000010764) #18	SLC44A4 (ENSMPUG00000010774) #19	NEU1 (ENSMPUG00000010780) #20	ENSMPUG00000010814 #21	HSPA1L (ENSMPUG00000018358) #22	ENSMPUG00000010816 #23	VARS1 (ENSMPUG00000010821) #24	VWA7 (ENSMPUG00000010944) #25	SAPCD1 (ENSMPUG00000010984) #26	MSH5 (ENSMPUG00000010999) #27	CLIC1 (ENSMPUG00000011018) #28	DDAH2 (ENSMPUG00000011029) #29	MPIG6B (ENSMPUG00000011087) #30	LY6G6C (ENSMPUG00000011101) #31	ENSMPUG00000011107 #33	LY6G6F (ENSMPUG00000011112) ##32	ABHD16A (ENSMPUG00000011116) #35	LY6G5C (ENSMPUG00000011124) #36	ENSMPUG00000011129	GPANK1 (ENSMPUG00000011149)
American mink	MODERN SPECIES	437	FKBPL (ENSNVIG00000010056)	ATF6B (ENSNVIG00000010066) #7	ENSNVIG00000010183 #8	ENSNVIG00000010239 #8	CYP21A2 (ENSNVIG00000010270) #9	ENSNVIG00000010426 #10	STK19 (ENSNVIG00000013399) #11	DXO (ENSNVIG00000013450) #12	SKIC2 (ENSNVIG00000013478) #13	NELFE (ENSNVIG00000013531) #14	CFB (ENSNVIG00000013549) #15	C2 (ENSNVIG00000013576) #16	EHMT2 (ENSNVIG00000013727) #18	SLC44A4 (ENSNVIG00000015028) #19	NEU1 (ENSNVIG00000015220) #20	HSPA1L (ENSNVIG00000015272) #22	VARS1 (ENSNVIG00000015283) #24	VWA7 (ENSNVIG00000015362) #25	SAPCD1 (ENSNVIG00000015392) #26	MSH5 (ENSNVIG00000015410) #27	CLIC1 (ENSNVIG00000015586) #28	DDAH2 (ENSNVIG00000015606) #29	MPIG6B (ENSNVIG00000015644) #30	LY6G6C (ENSNVIG00000015725) #31	LY6G6D (ENSNVIG00000015745) #32	ENSNVIG00000015755 #33	LY6G6F (ENSNVIG00000015765) ##32	ABHD16A (ENSNVIG00000015779) #35	LY6G5C (ENSNVIG00000015806) #36	LY6G5B (ENSNVIG00000015818) #37	ENSNVIG00000015823
Canidae	ANCESTRAL SPECIES	6	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576.b #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00390000006516	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708.nb.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Canis_lupus	ANCESTRAL SPECIES	11	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576.b #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00390000006516	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708.nb.a.a #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Dingo	MODERN SPECIES	276	ENSCAFG00020001086 #8	ENSCAFG00020001047 #8	CYP21A2 (ENSCAFG00020000996) #9	ENSCAFG00020000974 #10	STK19 (ENSCAFG00020000957) #11	DXO (ENSCAFG00020000953) #12	SKIC2 (ENSCAFG00020000948) #13	NELFE (ENSCAFG00020000938) #14	CFB (ENSCAFG00020000930) #15	C2 (ENSCAFG00020000917) #16	ZBTB12 (ENSCAFG00020000911) #17	EHMT2 (ENSCAFG00020000444) #18	SLC44A4 (ENSCAFG00020000124) #19	NEU1 (ENSCAFG00020000108) #20	ENSCAFG00020020814 #21	HSPA1L (ENSCAFG00020020809) #22	VARS1 (ENSCAFG00020020790) #24	VWA7 (ENSCAFG00020020763) #25	SAPCD1 (ENSCAFG00020020757) #26	MSH5 (ENSCAFG00020020751) #27	ENSCAFG00020020747 #28	DDAH2 (ENSCAFG00020020742) #29	MPIG6B (ENSCAFG00020020738) #30	LY6G6C (ENSCAFG00020020734) #31	LY6G6D (ENSCAFG00020020731) #32	ENSCAFG00020020728 #33	LY6G6F (ENSCAFG00020020724) ##32	ABHD16A (ENSCAFG00020020720) #35	LY6G5C (ENSCAFG00020020715) #36	LY6G5B (ENSCAFG00020020712) #37	CSNK2B (ENSCAFG00020020708)
Dog	MODERN SPECIES	3	FKBPL (ENSCAFG00845014657)	ATF6B (ENSCAFG00845014557) #7	ENSCAFG00845014483 #8	CYP21A2 (ENSCAFG00845014419) #9	DXO (ENSCAFG00845014369) #12	ENSCAFG00845014055 #10	NELFE (ENSCAFG00845013870) #14	CFB (ENSCAFG00845013817) #15	C2 (ENSCAFG00845013566) #16	ZBTB12 (ENSCAFG00845013446) #17	EHMT2 (ENSCAFG00845013373) #18	SLC44A4 (ENSCAFG00845013098) #19	NEU1 (ENSCAFG00845013021) #20	ENSCAFG00845012990	HSP70 (ENSCAFG00845012950) #21	HSPA1L (ENSCAFG00845012910) #22	LSM2 (ENSCAFG00845012870) #23	VARS1 (ENSCAFG00845012704) #24	ENSCAFG00845012611	VWA7 (ENSCAFG00845012577) #25	SAPCD1 (ENSCAFG00845012501) #26	MSH5 (ENSCAFG00845012274) #27	CLIC1 (ENSCAFG00845012196) #28	DDAH2 (ENSCAFG00845012152) #29	MPIG6B (ENSCAFG00845011979) #30	LY6G6C (ENSCAFG00845011914) #31	LY6G6D (ENSCAFG00845011897) #32	ENSCAFG00845011862 #33	LY6G6F (ENSCAFG00845011828) ##32	ABHD16A (ENSCAFG00845011638) #35	LY6G5C (ENSCAFG00845011560) #36
Felidae	ANCESTRAL SPECIES	5	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Panthera	ANCESTRAL SPECIES	7	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Panthera_a	ANCESTRAL SPECIES	49	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
leopard	MODERN SPECIES	243	ENSPPRG00000010194 #8	CYP21A1 (ENSPPRG00000009928) #9	ENSPPRG00000009491 #10	STK19 (ENSPPRG00000006513) #11	DXO (ENSPPRG00000005199) #12	SKIC2 (ENSPPRG00000005017) #13	NELFE (ENSPPRG00000004421) #14	CFB (ENSPPRG00000003761) #15	C2 (ENSPPRG00000002766) #16	ZBTB12 (ENSPPRG00000000449) #17	EHMT2 (ENSPPRG00000022615) #18	SLC44A4 (ENSPPRG00000024415) #19	NEU1 (ENSPPRG00000016768) #20	ENSPPRG00000021548 #21	ENSPPRG00000016028 #21	HSPA1L (ENSPPRG00000021499) #22	LSM2 (ENSPPRG00000015353) #23	VARS1 (ENSPPRG00000014855) #24	VWA7 (ENSPPRG00000013957) #25	SAPCD1 (ENSPPRG00000012516) #26	MSH5 (ENSPPRG00000010980) #27	ENSPPRG00000008716 #28	DDAH2 (ENSPPRG00000008197) #29	MPIG6B (ENSPPRG00000007507) #30	LY6G6C (ENSPPRG00000006955) #31	LY6G6D (ENSPPRG00000006927) #32	ENSPPRG00000006828 #33	LY6G6F (ENSPPRG00000006686) ##32	ABHD16A (ENSPPRG00000006264) #35	LY6G5C (ENSPPRG00000004751) #36	LY6G5B (ENSPPRG00000004348) #37
lion	MODERN SPECIES	86			CYP21A2 (ENSPLOG00000021913) #9	ENSPLOG00000021976 #10	STK19 (ENSPLOG00000005871) #11	DXO (ENSPLOG00000005918) #12	SKIC2 (ENSPLOG00000005988) #13	NELFE (ENSPLOG00000006142) #14	CFB (ENSPLOG00000006217) #15	C2 (ENSPLOG00000006345) #16	ZBTB12 (ENSPLOG00000006567) #17	EHMT2 (ENSPLOG00000006669) #18	SLC44A4 (ENSPLOG00000007011) #19	NEU1 (ENSPLOG00000007193) #20	ENSPLOG00000007223 #21	HSPA1L (ENSPLOG00000007243) #22	ENSPLOG00000007252 #23	VARS1 (ENSPLOG00000007286) #24	VWA7 (ENSPLOG00000007320) #25	SAPCD1 (ENSPLOG00000007372) #26	MSH5 (ENSPLOG00000007434) #27	CLIC1 (ENSPLOG00000007652) #28	DDAH2 (ENSPLOG00000007667) #29	MPIG6B (ENSPLOG00000007706) #30	LY6G6C (ENSPLOG00000007760) #31	LY6G6D (ENSPLOG00000007782) #32	ENSPLOG00000007823 #33	LY6G6F (ENSPLOG00000007854) ##32	ABHD16A (ENSPLOG00000007886) #35	LY6G5C (ENSPLOG00000007918) #36	LY6G5B (ENSPLOG00000007942) #37
Tiger	MODERN SPECIES	592		ENSPTIG00000014932 #8	CYP21A1 (ENSPTIG00000015168) #9	ENSPTIG00000015384	STK19 (ENSPTIG00000021459) #11	DXO (ENSPTIG00000021529) #12	SKIC2 (ENSPTIG00000021656) #13	NELFE (ENSPTIG00000003753) #14	CFB (ENSPTIG00000005658) #15	C2 (ENSPTIG00000006203) #16	ZBTB12 (ENSPTIG00000009624) #17	EHMT2 (ENSPTIG00000007133) #18	SLC44A4 (ENSPTIG00000008418) #19	NEU1 (ENSPTIG00000009705) #20	ENSPTIG00000009681 #21	HSPA1L (ENSPTIG00000009701) #22	LSM2 (ENSPTIG00000010303) #23	VARS1 (ENSPTIG00000010462) #24	VWA7 (ENSPTIG00000011365) #25	SAPCD1 (ENSPTIG00000011539) #26	MSH5 (ENSPTIG00000011792) #27	CLIC1 (ENSPTIG00000012802) #28	DDAH2 (ENSPTIG00000013344) #29	MPIG6B (ENSPTIG00000013479) #30	LY6G6C (ENSPTIG00000013535) #31	LY6G6D (ENSPTIG00000013643) #32	ENSPTIG00000013669 #33	LY6G6F (ENSPTIG00000013713) ##32	ABHD16A (ENSPTIG00000013746) #35	LY6G5C (ENSPTIG00000014347) #36	LY6G5B (ENSPTIG00000014380) #37
Cat	MODERN SPECIES	236	PRRT1 (ENSFCAG00000042315)	FKBPL (ENSFCAG00000004524)	ATF6B (ENSFCAG00000018408) #7	ENSFCAG00000033978 #8	CYP21A2 (ENSFCAG00000004522) #9	ENSFCAG00000018602 #10	DXO (ENSFCAG00000004520) #12	SKIC2 (ENSFCAG00000004519) #13	NELFE (ENSFCAG00000004518) #14	CFB (ENSFCAG00000004517) #15	C2 (ENSFCAG00000038245) #16	ZBTB12 (ENSFCAG00000031296) #17	EHMT2 (ENSFCAG00000004515) #18	NEU1 (ENSFCAG00000024446) #20	ENSFCAG00000043383 #21	HSPA1L (ENSFCAG00000004376) #22	LSM2 (ENSFCAG00000045887) #23	VARS1 (ENSFCAG00000004510) #24	VWA7 (ENSFCAG00000004509) #25	SAPCD1 (ENSFCAG00000025141) #26	MSH5 (ENSFCAG00000004508) #27	CLIC1 (ENSFCAG00000019049) #28	DDAH2 (ENSFCAG00000023516) #29	MPIG6B (ENSFCAG00000004507) #30	LY6G6C (ENSFCAG00000022395) #31	LY6G6D (ENSFCAG00000039838) #32	ENSFCAG00000031846 #33	LY6G6F (ENSFCAG00000007643) ##32	ABHD16A (ENSFCAG00000004504) #35	LY6G5C (ENSFCAG00000027029) #36	LY6G5B (ENSFCAG00000023609) #37
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT01090000263312	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Equus	ANCESTRAL SPECIES	10	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT01090000263312	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Donkey	MODERN SPECIES	28	TNXB (ENSEASG00005014360) #8	CYP21A2 (ENSEASG00005031351) #9	ENSEASG00005014465 #10	STK19 (ENSEASG00005015524) #11	DXO (ENSEASG00005015528) #12	SKIC2 (ENSEASG00005015534) #13	NELFE (ENSEASG00005015538) #14	CFB (ENSEASG00005015549) #15	C2 (ENSEASG00005015602) #16	ZBTB12 (ENSEASG00005015654) #17	EHMT2 (ENSEASG00005015655) #18	SLC44A4 (ENSEASG00005015659) #19	NEU1 (ENSEASG00005015661) #20	ENSEASG00005033759	ENSEASG00005031687 #21	HSPA1L (ENSEASG00005015667) #22	ENSEASG00005029150 #23	VARS1 (ENSEASG00005015673) #24	SAPCD1 (ENSEASG00005035061) #26	VWA7 (ENSEASG00005015684) #25	MSH5 (ENSEASG00005015720) #27	CLIC1 (ENSEASG00005015748) #28	DDAH2 (ENSEASG00005015752) #29	MPIG6B (ENSEASG00005015758) #30	ENSEASG00005032389 #31	ENSEASG00005037844 #33	ENSEASG00005015762 #32	LY6G6F (ENSEASG00005015764) ##32	ENSEASG00005029085	ENSEASG00005015798 #35	LY6G5C (ENSEASG00005016257) #36
Horse	MODERN SPECIES	12	FKBPL (ENSECAG00000001463)	ATF6B (ENSECAG00000021507) #7	TNXB (ENSECAG00000038712) #8	CYP21A1 (ENSECAG00000016208) #9	ENSECAG00000008615 #10	STK19 (ENSECAG00000024491) #11	DXO (ENSECAG00000019694) #12	SKIC2 (ENSECAG00000021823) #13	NELFE (ENSECAG00000012274) #14	CFB (ENSECAG00000011854) #15	ZBTB12 (ENSECAG00000034980) #17	C2 (ENSECAG00000004709) #16	EHMT2 (ENSECAG00000001546) #18	SLC44A4 (ENSECAG00000009701) #19	HSPA1A (ENSECAG00000001037) #21	ENSECAG00000000841 #22	LSM2 (ENSECAG00000018791) #23	VARS1 (ENSECAG00000014620) #24	SAPCD1 (ENSECAG00000003550) #26	VWA7 (ENSECAG00000006633) #25	CLIC1 (ENSECAG00000009680) #28	DDAH2 (ENSECAG00000023189) #29	MSH5 (ENSECAG00000020118) #27	ENSECAG00000032026 #31	ENSECAG00000019689 #33	ABHD16A (ENSECAG00000013375) #35	ENSECAG00000058483 ##32	LY6G5C (ENSECAG00000011814) #36	GPANK1 (ENSECAG00000019093)	ENSECAG00000042553 #37	C20H6orf47 (ENSECAG00000038641)
Chiroptera	ANCESTRAL SPECIES	20	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Megabat	MODERN SPECIES	3244																ENSPVAG00000012406 #22	LSM2 (ENSPVAG00000012405) #23	VARS1 (ENSPVAG00000012403) #24	VWA7 (ENSPVAG00000012396) #25	SAPCD1 (ENSPVAG00000012393) #26	MSH5 (ENSPVAG00000012392) #27	CLIC1 (ENSPVAG00000012391) #28	DDAH2 (ENSPVAG00000012390) #29	MPIG6B (ENSPVAG00000012389) #30	LY6G6C (ENSPVAG00000012388) #31	ENSPVAG00000012387	LY6G6F (ENSPVAG00000012385) ##32	ABHD16A (ENSPVAG00000012384) #35	ENSPVAG00000012383 #36	CSNK2B (ENSPVAG00000012382)	ENSPVAG00000012380
Microchiroptera	ANCESTRAL SPECIES	21	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000007175 #33	ENSGT00390000015960.a.a.b ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37
Microbat	MODERN SPECIES	1516											ENSMLUG00000004908 #18	SLC44A4 (ENSMLUG00000004887) #19	NEU1 (ENSMLUG00000004882) #20	ENSMLUG00000013589 #21	ENSMLUG00000004876 #21	HSPA1L (ENSMLUG00000013157) #22	VARS1 (ENSMLUG00000013126) #24	VWA7 (ENSMLUG00000013115) #25	MSH5 (ENSMLUG00000013103) #27	CLIC1 (ENSMLUG00000029014) #28	DDAH2 (ENSMLUG00000009494) #29	MPIG6B (ENSMLUG00000009481) #30	LY6G6C (ENSMLUG00000009471) #31	LY6G6F (ENSMLUG00000009461) ##32	ENSMLUG00000022636 #33	ABHD16A (ENSMLUG00000009427) #35	LY6G5C (ENSMLUG00000026524) #36	LY6G5B (ENSMLUG00000026027) #37	CSNK2B (ENSMLUG00000009414)	GPANK1 (ENSMLUG00000009408)	C6orf47 (ENSMLUG00000009403)
Greater horseshoe bat	MODERN SPECIES	21	FKBPL (ENSRFEG00010004642)	ATF6B (ENSRFEG00010004612) #7	TNXB (ENSRFEG00010004576) #8	CYP21A2 (ENSRFEG00010004504) #9	ENSRFEG00010003936 #10	STK19 (ENSRFEG00010003603) #11	DXO (ENSRFEG00010003576) #12	SKIC2 (ENSRFEG00010003408) #13	NELFE (ENSRFEG00010003277) #14	C2 (ENSRFEG00010003161) #16	ZBTB12 (ENSRFEG00010003090) #17	EHMT2 (ENSRFEG00010002923) #18	SLC44A4 (ENSRFEG00010002777) #19	NEU1 (ENSRFEG00010002744) #20	ENSRFEG00010002706 #21	HSPA1L (ENSRFEG00010002696) #22	LSM2 (ENSRFEG00010002680) #23	VARS1 (ENSRFEG00010002616) #24	VWA7 (ENSRFEG00010002527) #25	ENSRFEG00010002482 #26	MSH5 (ENSRFEG00010002383) #27	ENSRFEG00010002328 #28	DDAH2 (ENSRFEG00010002300) #29	MPIG6B (ENSRFEG00010002226) #30	LY6G6C (ENSRFEG00010002168) #31	LY6G6D (ENSRFEG00010002149) #32	ENSRFEG00010002132	LY6G6F (ENSRFEG00010002110) ##32	ABHD16A (ENSRFEG00010002067) #35	LY6G5C (ENSRFEG00010002040) #36	LY6G5B (ENSRFEG00010002025) #37
Atlantogenata	ANCESTRAL SPECIES	71	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00390000006516	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000007175 #33	ENSGT00390000015960.a.a ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37	ENSGT00390000003781.e.b
Xenarthra	ANCESTRAL SPECIES	153	ENSGT00390000008726.h.b	ENSGT00940000155779.a.b	ENSGT00940000160798 #7	ENSGT00940000162382	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000162096 #22	ENSGT00390000016597 #23
Armadillo	MODERN SPECIES	910	AGPAT1 (ENSDNOG00000031697)	ENSDNOG00000024209	ATF6B (ENSDNOG00000042135) #7	PRRT1 (ENSDNOG00000039982)	TNXB (ENSDNOG00000044250) #8	CYP21A2 (ENSDNOG00000043254) #9	ENSDNOG00000048858 #10	STK19 (ENSDNOG00000036273) #11	DXO (ENSDNOG00000038155) #12	SKIC2 (ENSDNOG00000037590) #13	ENSDNOG00000041886 #14	ENSDNOG00000042923 #15	EHMT2 (ENSDNOG00000045233) #18	SLC44A4 (ENSDNOG00000037836) #19	NEU1 (ENSDNOG00000043068) #20	HSPA1L (ENSDNOG00000002634) #22	LSM2 (ENSDNOG00000002633) #23
Afrotheria	ANCESTRAL SPECIES	127																ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000007175 #33	ENSGT00390000015960.a.a ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37	ENSGT00390000003781.e.b
Afrotheria_a	ANCESTRAL SPECIES	78	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215 #21	ENSGT00390000006516	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00500000045192 #26	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000007175 #33	ENSGT00390000015960.a.a ##32	ENSGT00940000160908 #35	ENSGT00390000011513 #36	ENSGT00520000060793 #37	ENSGT00390000003781.e.b
Elephant	MODERN SPECIES	89	CYP21A2 (ENSLAFG00000029194) #9	ENSLAFG00000014252 #10	STK19 (ENSLAFG00000014246) #11	DXO (ENSLAFG00000014243) #12	SKIC2 (ENSLAFG00000014231) #13	NELFE (ENSLAFG00000028155) #14	CFB (ENSLAFG00000014225) #15	C2 (ENSLAFG00000014221) #16	ZBTB12 (ENSLAFG00000008173) #17	EHMT2 (ENSLAFG00000008169) #18	SLC44A4 (ENSLAFG00000008164) #19	NEU1 (ENSLAFG00000022690) #20	ENSLAFG00000025973 #21	ENSLAFG00000031724	ENSLAFG00000029077	HSPA1L (ENSLAFG00000032136) #22	ENSLAFG00000028019	LSM2 (ENSLAFG00000016139) #23	VARS1 (ENSLAFG00000023090) #24	VWA7 (ENSLAFG00000016131) #25	SAPCD1 (ENSLAFG00000020972) #26	MSH5 (ENSLAFG00000016118) #27	CLIC1 (ENSLAFG00000021620) #28	DDAH2 (ENSLAFG00000026302) #29	MPIG6B (ENSLAFG00000027847) #30	LY6G6F (ENSLAFG00000005926) ##32	ENSLAFG00000005927 #33	ABHD16A (ENSLAFG00000009495) #35	LY6G5C (ENSLAFG00000031499) #36	LY6G5B (ENSLAFG00000030266) #37	CSNK2B (ENSLAFG00000002703)
Hyrax	MODERN SPECIES	7126																HSPA1L (ENSPCAG00000013768) #22	LSM2 (ENSPCAG00000013737) #23	VARS1 (ENSPCAG00000013565) #24	ENSPCAG00000013461 #25	SAPCD1 (ENSPCAG00000013434) #26	MSH5 (ENSPCAG00000013299) #27	CLIC1 (ENSPCAG00000013268) #28	DDAH2 (ENSPCAG00000013218) #29	ENSPCAG00000013176 #30	LY6G6C (ENSPCAG00000013148) #31	ENSPCAG00000013115 #33	ENSPCAG00000013074 ##32	ABHD16A (ENSPCAG00000012939) #35	CSNK2B (ENSPCAG00000012873)	GPANK1 (ENSPCAG00000012850)	C6orf47 (ENSPCAG00000012839)
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215.l #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000015960.b ##32	ENSGT00940000160908 #35	ENSGT00390000003781.e.b.w.a	ENSGT00390000003292	ENSGT00390000009270	ENSGT00390000001026
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215.l #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000015960.b ##32	ENSGT00940000160908 #35	ENSGT00390000003781.e.b.x	ENSGT00390000003781.e.b.w.b.b	ENSGT00390000003292	ENSGT00390000009270
Tasmanian devil	DUPLICATION
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000024676	FKBPL (ENSSHAG00000021705)	ATF6B (ENSSHAG00000010010) #7	TNXB (ENSSHAG00000009524) #8	CYP21A2 (ENSSHAG00000009476) #9	SKIC2 (ENSSHAG00000008963) #13	ENSSHAG00000009118 #10	DXO (ENSSHAG00000009052) #12	NELFE (ENSSHAG00000030731) #14	CFB (ENSSHAG00000008733) #15	C2 (ENSSHAG00000020551) #16	EHMT2 (ENSSHAG00000008173) #18	SLC44A4 (ENSSHAG00000008048) #19	ENSSHAG00000031809 #20	ENSSHAG00000022826 #22	ENSSHAG00000027136 #22	LSM2 (ENSSHAG00000023089) #23	VARS1 (ENSSHAG00000006937) #24	VWA7 (ENSSHAG00000024459) #25	MSH5 (ENSSHAG00000006612) #27	DDAH2 (ENSSHAG00000006438) #29	ENSSHAG00000006406 #30	ABHD16A (ENSSHAG00000002668) #35	CSNK2B (ENSSHAG00000001478)	BAG6 (ENSSHAG00000005423)	ENSSHAG00000027915	PRRC2A (ENSSHAG00000005204)	ENSSHAG00000020492	LTB (ENSSHAG00000004144)	TNF (ENSSHAG00000030041)	LTA (ENSSHAG00000027124)
Tasmanian devil	MODERN SPECIES	3	TNF (ENSSHAG00000030041)	LTB (ENSSHAG00000004144)	ENSSHAG00000020492	PRRC2A (ENSSHAG00000005204)	ENSSHAG00000027915	BAG6 (ENSSHAG00000005423)	CSNK2B (ENSSHAG00000001478)	ABHD16A (ENSSHAG00000002668) #35	ENSSHAG00000006406 #30	DDAH2 (ENSSHAG00000006438) #29	MSH5 (ENSSHAG00000006612) #27	VWA7 (ENSSHAG00000024459) #25	VARS1 (ENSSHAG00000006937) #24	LSM2 (ENSSHAG00000023089) #23	ENSSHAG00000027136 #22	ENSSHAG00000022826 #22	ENSSHAG00000031809 #20	SLC44A4 (ENSSHAG00000008048) #19	EHMT2 (ENSSHAG00000008173) #18	C2 (ENSSHAG00000020551) #16	CFB (ENSSHAG00000008733) #15	NELFE (ENSSHAG00000030731) #14	DXO (ENSSHAG00000009052) #12	ENSSHAG00000009118 #10	SKIC2 (ENSSHAG00000008963) #13	CYP21A2 (ENSSHAG00000009476) #9	TNXB (ENSSHAG00000009524) #8	ATF6B (ENSSHAG00000010010) #7	FKBPL (ENSSHAG00000021705)	ENSSHAG00000024676	PPT2 (ENSSHAG00000010290)
Diprotodontia	ANCESTRAL SPECIES	42	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215.l #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00550000074977 #27	ENSGT00940000154708 #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000015960.b ##32	ENSGT00940000160908 #35	ENSGT00390000003781.e.b.w.b.b	ENSGT00390000003292	ENSGT00390000009270	ENSGT00390000001026
Diprotodontia_a	ANCESTRAL SPECIES	41	ENSGT00940000160798 #7	ENSGT00940000155565 #8	ENSGT00940000158338 #9	ENSGT00940000155739 #10	ENSGT00390000018295 #11	ENSGT00390000006425 #12	ENSGT00940000158255 #13	ENSGT00630000089917 #14	ENSGT00940000158605.fb #15	ENSGT00940000162934 #16	ENSGT00940000162418 #17	ENSGT00940000159459 #18	ENSGT00940000160576 #19	ENSGT00950000182944.D #20	ENSGT00940000161215.l #21	ENSGT00940000162096 #22	ENSGT00390000016597 #23	ENSGT00940000157775 #24	ENSGT00390000011517.a.b #25	ENSGT00550000074977 #27	ENSGT00940000154708.rb #28	ENSGT00940000154708.sb #28	ENSGT00940000160769 #29	ENSGT00390000017793 #30	ENSGT00390000000752 #31	ENSGT00390000015960.a.b.b #32	ENSGT00390000015960.b ##32	ENSGT00940000160908 #35	ENSGT00520000060793 #37	ENSGT00390000003781.e.b.w.b.b	ENSGT00390000003292
koala	MODERN SPECIES	254	ATF6B (ENSPCIG00000023354) #7	ENSPCIG00000033698 #8	ENSPCIG00000034697 #8	CYP21A2 (ENSPCIG00000018796) #9	ENSPCIG00000018795 #10	STK19 (ENSPCIG00000018794) #11	DXO (ENSPCIG00000018793) #12	SKIC2 (ENSPCIG00000018792) #13	NELFE (ENSPCIG00000018791) #14	CFB (ENSPCIG00000018602) #15	C2 (ENSPCIG00000018577) #16	EHMT2 (ENSPCIG00000018573) #18	SLC44A4 (ENSPCIG00000018569) #19	NEU1 (ENSPCIG00000018566) #20	ENSPCIG00000036093 #21	HSPA1L (ENSPCIG00000034441) #22	LSM2 (ENSPCIG00000018560) #23	VARS1 (ENSPCIG00000018553) #24	ENSPCIG00000031031 #25	MSH5 (ENSPCIG00000018524) #27	ENSPCIG00000018521 #28	DDAH2 (ENSPCIG00000018519) #29	ENSPCIG00000018517 #30	ENSPCIG00000018515 #31	ENSPCIG00000018513 ##32	ABHD16A (ENSPCIG00000018508) #35	ENSPCIG00000018510 #37	ENSPCIG00000018506	GPANK1 (ENSPCIG00000018505)	C6orf47 (ENSPCIG00000018504)	APOM (ENSPCIG00000018503)
Platypus	DUPLICATION
Platypus	MODERN SPECIES	88	ENSOANG00000049834	BAG6 (ENSOANG00000030898)	ENSOANG00000046320	GPANK1 (ENSOANG00000043588)	ENSOANG00000047546	ABHD16A (ENSOANG00000012820) #35	ENSOANG00000002164 #32	ENSOANG00000048506 #31	DDAH2 (ENSOANG00000048277) #29	CLIC1 (ENSOANG00000051271) #28	MSH5 (ENSOANG00000004089) #27	VWA7 (ENSOANG00000004090) #25	VARS1 (ENSOANG00000005400) #24	ENSOANG00000005398 #23	ENSOANG00000039824 #22	ENSOANG00000005396 #22	NEU1 (ENSOANG00000050558) #20	SLC44A4 (ENSOANG00000043990) #19	EHMT2 (ENSOANG00000045934) #18	C2 (ENSOANG00000015604) #16	NELFE (ENSOANG00000043127) #14	SKIC2 (ENSOANG00000043811) #13	DXO (ENSOANG00000045425) #12	STK19 (ENSOANG00000041085) #11	ENSOANG00000043996 #10	CYP21A2 (ENSOANG00000000301) #9	ENSOANG00000000594 #8	ENSOANG00000014402 #8	ATF6B (ENSOANG00000043339) #7	FKBPL (ENSOANG00000036168)	PRRT1 (ENSOANG00000042428)
Platypus	MODERN SPECIES	88	FKBPL (ENSOANG00000036168)	ATF6B (ENSOANG00000043339) #7	ENSOANG00000014402 #8	ENSOANG00000000594 #8	CYP21A2 (ENSOANG00000000301) #9	ENSOANG00000043996 #10	STK19 (ENSOANG00000041085) #11	DXO (ENSOANG00000045425) #12	SKIC2 (ENSOANG00000043811) #13	NELFE (ENSOANG00000043127) #14	C2 (ENSOANG00000015604) #16	EHMT2 (ENSOANG00000045934) #18	SLC44A4 (ENSOANG00000043990) #19	NEU1 (ENSOANG00000050558) #20	ENSOANG00000005396 #22	ENSOANG00000039824 #22	ENSOANG00000005398 #23	VARS1 (ENSOANG00000005400) #24	VWA7 (ENSOANG00000004090) #25	MSH5 (ENSOANG00000004089) #27	CLIC1 (ENSOANG00000051271) #28	DDAH2 (ENSOANG00000048277) #29	ENSOANG00000048506 #31	ENSOANG00000002164 #32	ABHD16A (ENSOANG00000012820) #35	ENSOANG00000047546	GPANK1 (ENSOANG00000043588)	ENSOANG00000046320	BAG6 (ENSOANG00000030898)	ENSOANG00000049834	Ltb (ENSOANG00000000232)
Actinopterygii	ANCESTRAL SPECIES	799														ENSGT00940000154813	ENSGT00940000161215 #21	ENSGT00940000162096 #22
Neopterygii	ANCESTRAL SPECIES	625														ENSGT00940000154813.e.a	ENSGT00940000161215 #21	ENSGT00940000162096 #22
Osteoglossocephalai	ANCESTRAL SPECIES	705														ENSGT00940000154813.e.a.b	ENSGT00940000161215 #21	ENSGT00940000162096 #22
Clupeocephala	ANCESTRAL SPECIES	183	ENSGT00940000165613	ENSGT01000000214789	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000154308.A.a.a.a	ENSGT00940000159141.j.a	ENSGT00530000064242.a	ENSGT00390000015229	ENSGT00390000007119	ENSGT00390000005976.b	ENSGT00940000157795.g.b	ENSGT00950000183191.a.a.f	ENSGT00940000154813.e.a.b	ENSGT00940000161215 #21	ENSGT00940000162096 #22	ENSGT00500000045140.a.a	ENSGT00530000063743.a	ENSGT00940000164922.g.a
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Huchen	MODERN SPECIES	7364														ENSHHUG00000020291	ahcyl1 (ENSHHUG00000020029)	ENSHHUG00000020025 #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Salmo	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Atlantic salmon	MODERN SPECIES	25	CAVIN1 (ENSSSAG00000010025)	stat3 (ENSSSAG00000010060)	stat5a (ENSSSAG00000010616)	ENSSSAG00000010992	hcrt (ENSSSAG00000011089)	kcnh4a (ENSSSAG00000011806)	RAB5C (ENSSSAG00000022042)	kat2a (ENSSSAG00000043811)	dhx58 (ENSSSAG00000037858)	ZNF385C (ENSSSAG00000086421)	nkiras2 (ENSSSAG00000088835)	dnajc7 (ENSSSAG00000039459)	odad4 (ENSSSAG00000041019)	ENSSSAG00000111367	ENSSSAG00000107977	ENSSSAG00000010535 #22	ENSSSAG00000018619	ENSSSAG00000085912	ENSSSAG00000083226	ENSSSAG00000099984	cn37 (ENSSSAG00000041127)	ACLY (ENSSSAG00000041201)	KLHL11 (ENSSSAG00000002537)	KLHL10 (ENSSSAG00000043913)	NT5C3B (ENSSSAG00000090249)	FKBP10 (ENSSSAG00000043973)	P3H4 (ENSSSAG00000044172)	ENSSSAG00000002294	42sp43 (ENSSSAG00000045518)	STAC2 (ENSSSAG00000112015)	ENSSSAG00000045563
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Ovalentaria	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Atherinomorphae	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Cyprinodontiformes	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Aplocheiloidei	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Turquoise killifish	MODERN SPECIES	1127																ENSNFUG00015009755 #22	SH2B1 (ENSNFUG00015009742)
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Eupercaria	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Eupecaria_B	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Perciformes	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Cottioidei	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Lumpfish	MODERN SPECIES	22	ENSCLMG00005009204	atp5pb (ENSCLMG00005009206)	ENSCLMG00005009211	GSTM4 (ENSCLMG00005009212)	AMPD2 (ENSCLMG00005009223)	gnat2 (ENSCLMG00005009237)	gnai3 (ENSCLMG00005009239)	GPR61 (ENSCLMG00005009240)	AMIGO1 (ENSCLMG00005009241)	ENSCLMG00005009242	SYPL2 (ENSCLMG00005009243)	sort1b (ENSCLMG00005009318)	ngrn (ENSCLMG00005010979)	nfyal (ENSCLMG00005010980)	ahcyl1 (ENSCLMG00005010984)	ENSCLMG00005011399 #22	KCNC4 (ENSCLMG00005011400)	slc6a17 (ENSCLMG00005011401)	ALX3 (ENSCLMG00005011412)	RBM15 (ENSCLMG00005011415)	slc16a4 (ENSCLMG00005011418)	lamtor5 (ENSCLMG00005011420)	prok1 (ENSCLMG00005011421)	ENSCLMG00005011422	ZNF335 (ENSCLMG00005011427)	mmp9 (ENSCLMG00005011431)	adora1b (ENSCLMG00005011509)	dclre1b (ENSCLMG00005011515)	ENSCLMG00005011517	lhfpl5b (ENSCLMG00005011519)	srpk1a (ENSCLMG00005011520)
Percomorphaceae_D	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Anabantaria	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Zig-zag eel	DUPLICATION
Zig-zag eel	MODERN SPECIES	22	ENSMAMG00000018965	ENSMAMG00000024641	ENSMAMG00000018931	ENSMAMG00000026778	ENSMAMG00000018914	ENSMAMG00000027395	ENSMAMG00000026369 #22	ENSMAMG00000025416	ENSMAMG00000018075	ENSMAMG00000018784	cdipt (ENSMAMG00000026556)	ENSMAMG00000018743	nlk1 (ENSMAMG00000025830)	ENSMAMG00000018693	ENSMAMG00000025850	ENSMAMG00000026943 #22	ENSMAMG00000025467	ENSMAMG00000018036	ENSMAMG00000026956	sh2b1 (ENSMAMG00000017997)	atxn2l (ENSMAMG00000017977)	spns1 (ENSMAMG00000017952)	ENSMAMG00000017936	ENSMAMG00000017924	sgf29 (ENSMAMG00000027243)	nupr1b (ENSMAMG00000017896)	ENSMAMG00000017875	ENSMAMG00000017850	ENSMAMG00000017838	ENSMAMG00000017792	ENSMAMG00000017736
Zig-zag eel	MODERN SPECIES	22	spns1 (ENSMAMG00000017952)	atxn2l (ENSMAMG00000017977)	sh2b1 (ENSMAMG00000017997)	ENSMAMG00000026956	ENSMAMG00000018036	ENSMAMG00000025467	ENSMAMG00000026943 #22	ENSMAMG00000025850	ENSMAMG00000018693	nlk1 (ENSMAMG00000025830)	ENSMAMG00000018743	cdipt (ENSMAMG00000026556)	ENSMAMG00000018784	ENSMAMG00000018075	ENSMAMG00000025416	ENSMAMG00000026369 #22	ENSMAMG00000027395	ENSMAMG00000018914	ENSMAMG00000026778	ENSMAMG00000018931	ENSMAMG00000024641	ENSMAMG00000018965	ENSMAMG00000018999	ENSMAMG00000026700	ENSMAMG00000027723	ENSMAMG00000019061	ENSMAMG00000019083	ENSMAMG00000019122	ENSMAMG00000019135	ENSMAMG00000019142	ENSMAMG00000019171
Carangaria	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Carangaria_A	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Seriola	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Yellowtail amberjack	MODERN SPECIES	2623																ENSSLDG00000006686 #22	ENSSLDG00000006058	cdipt (ENSSLDG00000005906)	MAZ (ENSSLDG00000005870)	nlk1 (ENSSLDG00000005829)
Otomorpha	ANCESTRAL SPECIES	979															ENSGT00940000161215 #21	ENSGT00940000162096 #22
Otophysi	ANCESTRAL SPECIES	788															ENSGT00940000161215 #21	ENSGT00940000162096 #22
Characiphysae	ANCESTRAL SPECIES	495															ENSGT00940000161215.b #21	ENSGT00940000162096 #22
Characiphysae_b	ANCESTRAL SPECIES	504															ENSGT00940000161215.b #21	ENSGT00940000162096 #22
Characoidei	ANCESTRAL SPECIES	652															ENSGT00940000161215.b #21	ENSGT00940000162096 #22
Red-bellied piranha	MODERN SPECIES	415	kcnh4a (ENSPNAG00000028111)	rab5c (ENSPNAG00000028138)	kat2a (ENSPNAG00000004382)	dhx58 (ENSPNAG00000028648)	ZNF385C (ENSPNAG00000028718)	nkiras2 (ENSPNAG00000005533)	dnajc7 (ENSPNAG00000006977)	odad4 (ENSPNAG00000028917)	ENSPNAG00000005391	aclya (ENSPNAG00000029072)	si:ch73-141c7.1 (ENSPNAG00000029095)	hsd17b1 (ENSPNAG00000029104)	ENSPNAG00000004514 #21	ENSPNAG00000029133 #21	ENSPNAG00000029143 #21	ENSPNAG00000004525 #22
Mexicana tetra	MODERN SPECIES	878									odad4 (ENSAMXG00000030297)	ENSAMXG00000032037	aclya (ENSAMXG00000000394)	ENSAMXG00000030468	si:ch73-141c7.1 (ENSAMXG00000035530)	hsd17b1 (ENSAMXG00000017757)	ENSAMXG00000043809	ENSAMXG00000042801 #22
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00940000162096 #22
Golden-line barbel	MODERN SPECIES	398	dnase1l1l (ENSSGRG00000011836)	ENSSGRG00000011829	eps8l3b (ENSSGRG00000011828)	gstm.3 (ENSSGRG00000009828)	AMPD2 (ENSSGRG00000007068)	gnat2 (ENSSGRG00000006893)	gnai3 (ENSSGRG00000006486)	GPR61 (ENSSGRG00000006473)	AMIGO1 (ENSSGRG00000006471)	atxn7l2b (ENSSGRG00000006469)	sypl2b (ENSSGRG00000006468)	sort1b (ENSSGRG00000006305)	ngrn (ENSSGRG00000006297)	ENSSGRG00000006296	ahcyl1 (ENSSGRG00000002112)	HSPA1L (ENSSGRG00000002024) #22	KCNC4 (ENSSGRG00000002019)	slc6a17 (ENSSGRG00000001290)	ENSSGRG00000001150	RBM15 (ENSSGRG00000001144)	slc16a4 (ENSSGRG00000050361)	lamtor5 (ENSSGRG00000050360)	prok1 (ENSSGRG00000050359)	ENSSGRG00000050358	mmp9 (ENSSGRG00000050287)	zgc:110353 (ENSSGRG00000050278)	adora1b (ENSSGRG00000050277)	dclre1b (ENSSGRG00000050276)	cpne5a (ENSSGRG00000050268)
Common carp reference	MODERN SPECIES	1	natd1 (ENSCCRG00000077389)	phospho1 (ENSCCRG00000068879)	ENSCCRG00000059749	phb (ENSCCRG00000075098)	mvp (ENSCCRG00000035425)	ENSCCRG00000035170	ENSCCRG00000035149	zgc:66474 (ENSCCRG00000071865)	ENSCCRG00000064469	ENSCCRG00000063618	nupr1b (ENSCCRG00000024365)	sgf29 (ENSCCRG00000061681)	spns1 (ENSCCRG00000002599)	atxn2l (ENSCCRG00000051027)	sh2b1 (ENSCCRG00000051059)	ENSCCRG00000038922 #22	pitpnbl (ENSCCRG00000051080)	cabp5b (ENSCCRG00000064584)	ENSCCRG00000071209	ENSCCRG00000051786	hirip3 (ENSCCRG00000051794)	rprml (ENSCCRG00000061133)	itgb3a (ENSCCRG00000006571)	mettl2a (ENSCCRG00000010206)	ENSCCRG00000032612	rnd2 (ENSCCRG00000077623)	ENSCCRG00000065467	vat1 (ENSCCRG00000058207)	ENSCCRG00000017238	asb16 (ENSCCRG00000017234)	tmub2 (ENSCCRG00000008660)