Sarcopterygii	ANCESTRAL SPECIES	38							ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00530000063829.B	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00390000009505 #35
Tetrapoda	ANCESTRAL SPECIES	16	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Amniota	ANCESTRAL SPECIES	25	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Mammalia	ANCESTRAL SPECIES	62	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Theria	ANCESTRAL SPECIES	17	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36
Eutheria	ANCESTRAL SPECIES	19	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00940000169413	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00940000169413	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00990000204193
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00940000169413	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00990000204193
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00990000204193
Camelidae	ANCESTRAL SPECIES	9	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37	ENSGT00940000156041
Arabian camel	MODERN SPECIES	35	LRP3 (ENSCDRG00005018325) #7	ENSCDRG00005018548 #8	GPATCH1 (ENSCDRG00005018715) #9	RHPN2 (ENSCDRG00005019052) #10	FAAP24 (ENSCDRG00005019258) #11	CEP89 (ENSCDRG00005019493) #12	SLC7A9 (ENSCDRG00005019910) #13	TDRD12 (ENSCDRG00005020226) #14	NUDT19 (ENSCDRG00005020362) #15	RGS9BP (ENSCDRG00005020448) #16	ANKRD27 (ENSCDRG00005020575) #17	ENSCDRG00005020847 #18	DPY19L3 (ENSCDRG00005021111) #19	ZNF507 (ENSCDRG00005021348) #20	ENSCDRG00005021461 #21	TSHZ3 (ENSCDRG00005021492) #22	ZNF536 (ENSCDRG00005021564) #23	URI1 (ENSCDRG00005021639) #24	CCNE1 (ENSCDRG00005021725) #25	C19orf12 (ENSCDRG00005021821) #26	PLEKHF1 (ENSCDRG00005021848) #27	POP4 (ENSCDRG00005021850) #28	UQCRFS1 (ENSCDRG00005021891) #29	ENSCDRG00005021909 #30	SHCBP1 (ENSCDRG00005021912) #31	VPS35 (ENSCDRG00005021932) #32	ORC6 (ENSCDRG00005021936) #33	MYLK3 (ENSCDRG00005021954) #34	ENSCDRG00005022000 #35	GPT2 (ENSCDRG00005022050) #36	DNAJA2 (ENSCDRG00005022140) #37
Alpaca	MODERN SPECIES	118																ENSVPAG00000007970 #22
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00990000204193
Pecora	ANCESTRAL SPECIES	4	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00940000154509.y.b.a.a.b	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Bovidae	ANCESTRAL SPECIES	4	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00940000154509.y.b.a.a.b	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00940000157868.c	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00940000157868.c	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Goat	MODERN SPECIES	9	CEBPA (ENSCHIG00000011587)	SLC7A10 (ENSCHIG00000023717)	LRP3 (ENSCHIG00000012481) #7	GPATCH1 (ENSCHIG00000019626) #9	ENSCHIG00000023853	RHPN2 (ENSCHIG00000010158) #10	FAAP24 (ENSCHIG00000021119) #11	CEP89 (ENSCHIG00000014142) #12	NUDT19 (ENSCHIG00000021537) #15	RGS9BP (ENSCHIG00000007331) #16	ANKRD27 (ENSCHIG00000017376) #17	PDCD5 (ENSCHIG00000006484) #18	DPY19L3 (ENSCHIG00000021524) #19	ZNF507 (ENSCHIG00000026183) #20	ENSCHIG00000020296	TSHZ3 (ENSCHIG00000015004) #22	ZNF536 (ENSCHIG00000015719) #23	URI1 (ENSCHIG00000011466) #24	CCNE1 (ENSCHIG00000024742) #25	C19orf12 (ENSCHIG00000023412) #26	PLEKHF1 (ENSCHIG00000005768) #27	POP4 (ENSCHIG00000016743) #28	HYDIN (ENSCHIG00000026411)	ENSCHIG00000013255	CMTR2 (ENSCHIG00000008526)	CALB2 (ENSCHIG00000019148)	TLE7 (ENSCHIG00000016108)	ENSCHIG00000016867	ZNF19 (ENSCHIG00000015453)	CHST4 (ENSCHIG00000007788)	TAT (ENSCHIG00000018390)
Rambouillet Sheep	MODERN SPECIES	5	GPATCH1 (ENSOARG00020011298) #9	RHPN2 (ENSOARG00020011137) #10	FAAP24 (ENSOARG00020011075) #11	CEP89 (ENSOARG00020010986) #12	SLC7A9 (ENSOARG00020010886) #13	TDRD12 (ENSOARG00020010036) #14	NUDT19 (ENSOARG00020018292) #15	ENSOARG00020018245	RGS9BP (ENSOARG00020018201) #16	TLCD3A (ENSOARG00020018181)	ANKRD27 (ENSOARG00020017656) #17	PDCD5 (ENSOARG00020017391) #18	DPY19L3 (ENSOARG00020017008) #19	ZNF507 (ENSOARG00020016947) #20	ENSOARG00020016916	TSHZ3 (ENSOARG00020016853) #22	ZNF536 (ENSOARG00020016711) #23	URI1 (ENSOARG00020016490) #24	CCNE1 (ENSOARG00020016006) #25	C19orf12 (ENSOARG00020015895) #26	PLEKHF1 (ENSOARG00020015872) #27	POP4 (ENSOARG00020015812) #28	ENSOARG00020015294	CMTR2 (ENSOARG00020015255)	CALB2 (ENSOARG00020015182)	TLE7 (ENSOARG00020015063)	ZNF23 (ENSOARG00020015007)	ZNF19 (ENSOARG00020014924)	CHST4 (ENSOARG00020014903)	TAT (ENSOARG00020014764)	ENSOARG00020014620
Bovinae	ANCESTRAL SPECIES	3	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00940000154509.y.b.a.a.b	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00940000157868.c	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Bos	ANCESTRAL SPECIES	4	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00940000154509.y.b.a.a.b	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00940000157868.c	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Bos_b	ANCESTRAL SPECIES		ENSGT00390000007074 #9	ENSGT00940000154509.y.b.a.a.b	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00950000186085	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00940000157868.c	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Cow	MODERN SPECIES	9	WDR88 (ENSBTAG00000031810) #8	GPATCH1 (ENSBTAG00000000721) #9	ENSBTAG00000049582	RHPN2 (ENSBTAG00000003089) #10	FAAP24 (ENSBTAG00000010403) #11	CEP89 (ENSBTAG00000004864) #12	SLC7A9 (ENSBTAG00000013338) #13	TDRD12 (ENSBTAG00000019266) #14	ENSBTAG00000049809	NUDT19 (ENSBTAG00000023614) #15	RGS9BP (ENSBTAG00000039441) #16	ANKRD27 (ENSBTAG00000009305) #17	PDCD5 (ENSBTAG00000009304) #18	DPY19L3 (ENSBTAG00000015165) #19	ZNF507 (ENSBTAG00000014123) #20	TSHZ3 (ENSBTAG00000002687) #22	ZNF536 (ENSBTAG00000007262) #23	URI1 (ENSBTAG00000007559) #24	CCNE1 (ENSBTAG00000004735) #25	C18H19orf12 (ENSBTAG00000020434) #26	PLEKHF1 (ENSBTAG00000008625) #27	POP4 (ENSBTAG00000002223) #28	ENSBTAG00000051512	CMTR2 (ENSBTAG00000047367)	CALB2 (ENSBTAG00000001075)	ZNF23 (ENSBTAG00000050281)	ZNF19 (ENSBTAG00000032018)	CHST4 (ENSBTAG00000016968)	TAT (ENSBTAG00000002214)	MARVELD3 (ENSBTAG00000007544)	PHLPP2 (ENSBTAG00000007545)
Hybrid Bos Indicus	MODERN SPECIES	9	WDR88 (ENSBIXG00005028616) #8	GPATCH1 (ENSBIXG00005028563) #9	RHPN2 (ENSBIXG00005004919) #10	ENSBIXG00005028497	FAAP24 (ENSBIXG00005002469) #11	CEP89 (ENSBIXG00005028440) #12	SLC7A9 (ENSBIXG00005004880) #13	TDRD12 (ENSBIXG00005028317) #14	ENSBIXG00005028232	RGS9BP (ENSBIXG00005028222) #16	ANKRD27 (ENSBIXG00005028194) #17	ENSBIXG00005004831	DPY19L3 (ENSBIXG00005028026) #19	ZNF507 (ENSBIXG00005027929) #20	ENSBIXG00005027900	TSHZ3 (ENSBIXG00005027810) #22	ZNF536 (ENSBIXG00005004770) #23	URI1 (ENSBIXG00005027711) #24	CCNE1 (ENSBIXG00005027655) #25	C19orf12 (ENSBIXG00005027595) #26	PLEKHF1 (ENSBIXG00005027531) #27	POP4 (ENSBIXG00005027514) #28	ENSBIXG00005027467	ENSBIXG00005004688	CMTR2 (ENSBIXG00005027123)	CALB2 (ENSBIXG00005027092)	TLE7 (ENSBIXG00005027053)	ZNF23 (ENSBIXG00005004631)	ZNF19 (ENSBIXG00005026993)	CHST4 (ENSBIXG00005026947)	TAT (ENSBIXG00005026937)
Bos_a	ANCESTRAL SPECIES	1	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00940000154509.y.b.a.a.b	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00610000086095	ENSGT00940000161773	ENSGT00950000183108.b.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00940000162377	ENSGT00940000163278	ENSGT00940000162746	ENSGT00940000156704	ENSGT00950000183102.A.b.b
Domestic yak	MODERN SPECIES	12	WDR88 (ENSBGRG00000012742) #8	GPATCH1 (ENSBGRG00000012937) #9	RHPN2 (ENSBGRG00000013257) #10	ENSBGRG00000013384	FAAP24 (ENSBGRG00000013456) #11	CEP89 (ENSBGRG00000013711) #12	SLC7A9 (ENSBGRG00000014100) #13	TDRD12 (ENSBGRG00000014365) #14	NUDT19 (ENSBGRG00000015404) #15	ENSBGRG00000015627	RGS9BP (ENSBGRG00000015694) #16	ANKRD27 (ENSBGRG00000015781) #17	PDCD5 (ENSBGRG00000016600) #18	DPY19L3 (ENSBGRG00000016779) #19	ZNF507 (ENSBGRG00000017072) #20	ENSBGRG00000017301 #22	ENSBGRG00000017388	ZNF536 (ENSBGRG00000017429) #23	URI1 (ENSBGRG00000017617) #24	CCNE1 (ENSBGRG00000017848) #25	C19orf12 (ENSBGRG00000018064) #26	PLEKHF1 (ENSBGRG00000018110) #27	POP4 (ENSBGRG00000018144) #28	ENSBGRG00000018230	CMTR2 (ENSBGRG00000018577)	CALB2 (ENSBGRG00000018597)	TLE7 (ENSBGRG00000018847)	ZNF23 (ENSBGRG00000018887)	ZNF19 (ENSBGRG00000018945)	ENSBGRG00000019020	CHST4 (ENSBGRG00000019045)
Wild yak	MODERN SPECIES	1955																TSHZ3 (ENSBMUG00000008971) #22	ZNF536 (ENSBMUG00000008978) #23
American bison	MODERN SPECIES	3211																TSHZ3 (ENSBBBG00000004412) #22	ZNF536 (ENSBBBG00000017947) #23	URI1 (ENSBBBG00000017939) #24	CCNE1 (ENSBBBG00000017896) #25	C19orf12 (ENSBBBG00000017853) #26	PLEKHF1 (ENSBBBG00000008008) #27	POP4 (ENSBBBG00000017837) #28	ENSBBBG00000017818	CMTR2 (ENSBBBG00000004380)	CALB2 (ENSBBBG00000017758)	TLE7 (ENSBBBG00000017714)	ZNF23 (ENSBBBG00000017702)	ZNF19 (ENSBBBG00000017689)	CHST4 (ENSBBBG00000017670)	TAT (ENSBBBG00000017662)	ENSBBBG00000017644
Siberian musk deer	MODERN SPECIES	125	GPATCH1 (ENSMMSG00000000877) #9	RHPN2 (ENSMMSG00000000908) #10	ENSMMSG00000000960	FAAP24 (ENSMMSG00000000974) #11	CEP89 (ENSMMSG00000001009) #12	SLC7A9 (ENSMMSG00000001076) #13	TDRD12 (ENSMMSG00000001219) #14	NUDT19 (ENSMMSG00000001655) #15	RGS9BP (ENSMMSG00000001664) #16	ANKRD27 (ENSMMSG00000001694) #17	PDCD5 (ENSMMSG00000001787) #18	DPY19L3 (ENSMMSG00000001821) #19	ZNF507 (ENSMMSG00000001851) #20	ENSMMSG00000001861	ENSMMSG00000001891	TSHZ3 (ENSMMSG00000001900) #22	ZNF536 (ENSMMSG00000001908) #23	URI1 (ENSMMSG00000001916) #24	CCNE1 (ENSMMSG00000001931) #25	C19orf12 (ENSMMSG00000001952) #26	POP4 (ENSMMSG00000001970) #28	HYDIN (ENSMMSG00000002047)	ENSMMSG00000002328	CMTR2 (ENSMMSG00000002352)	CALB2 (ENSMMSG00000002376)	TLE7 (ENSMMSG00000002450)	ZNF23 (ENSMMSG00000002487)	ZNF19 (ENSMMSG00000002502)	CHST4 (ENSMMSG00000002516)	TAT (ENSMMSG00000002530)	ENSMMSG00000002572
Yarkand deer	MODERN SPECIES	27	SLC7A10 (ENSCHYG00000007871)	LRP3 (ENSCHYG00000007799) #7	ENSCHYG00000007774 #8	GPATCH1 (ENSCHYG00000007727) #9	RHPN2 (ENSCHYG00000007660) #10	FAAP24 (ENSCHYG00000007619) #11	CEP89 (ENSCHYG00000007507) #12	SLC7A9 (ENSCHYG00000007447) #13	TDRD12 (ENSCHYG00000007254) #14	NUDT19 (ENSCHYG00000007216) #15	RGS9BP (ENSCHYG00000007182) #16	ANKRD27 (ENSCHYG00000006798) #17	PDCD5 (ENSCHYG00000006657) #18	DPY19L3 (ENSCHYG00000006514) #19	ZNF507 (ENSCHYG00000006472) #20	TSHZ3 (ENSCHYG00000006419) #22	ZNF536 (ENSCHYG00000006308) #23	ENSCHYG00000006259	URI1 (ENSCHYG00000006211) #24	CCNE1 (ENSCHYG00000006119) #25	C19orf12 (ENSCHYG00000006082) #26	PLEKHF1 (ENSCHYG00000006065) #27	ENSCHYG00000006027 #28	ENSCHYG00000006005	ENSCHYG00000005945	CMTR2 (ENSCHYG00000005918)	CALB2 (ENSCHYG00000005859)	TLE7 (ENSCHYG00000005818)	ZNF23 (ENSCHYG00000024101)	ZNF19 (ENSCHYG00000024051)	TAT (ENSCHYG00000024008)
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085.sb.b #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085.sb.b #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085.sb.b #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370.i #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085.sb.b #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370.i #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085.tb #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370.i #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Beluga whale	MODERN SPECIES	14	ENSDLEG00000000950 #8	GPATCH1 (ENSDLEG00000000964) #9	RHPN2 (ENSDLEG00000000997) #10	FAAP24 (ENSDLEG00000001028) #11	CEP89 (ENSDLEG00000001045) #12	ENSDLEG00000001076	SLC7A9 (ENSDLEG00000001083) #13	ENSDLEG00000001110	TDRD12 (ENSDLEG00000001176) #14	NUDT19 (ENSDLEG00000001447) #15	RGS9BP (ENSDLEG00000001457) #16	ANKRD27 (ENSDLEG00000001495) #17	ENSDLEG00000001621 #18	DPY19L3 (ENSDLEG00000001647) #19	ZNF507 (ENSDLEG00000001695) #20	TSHZ3 (ENSDLEG00000001711) #22	ZNF536 (ENSDLEG00000001724) #23	URI1 (ENSDLEG00000001739) #24	CCNE1 (ENSDLEG00000001752) #25	CUNH19orf12 (ENSDLEG00000001761) #26	POP4 (ENSDLEG00000001765) #28	VSTM2B (ENSDLEG00000001777)	UQCRFS1 (ENSDLEG00000001783) #29
Narwhal	MODERN SPECIES	296	WDR88 (ENSMMNG00015002263) #8	GPATCH1 (ENSMMNG00015002182) #9	RHPN2 (ENSMMNG00015002110) #10	FAAP24 (ENSMMNG00015002077) #11	ENSMMNG00015002056	CEP89 (ENSMMNG00015001947) #12	ENSMMNG00015001894	SLC7A9 (ENSMMNG00015001863) #13	TDRD12 (ENSMMNG00015001768) #14	NUDT19 (ENSMMNG00015001712) #15	RGS9BP (ENSMMNG00015001697) #16	ANKRD27 (ENSMMNG00015001650) #17	PDCD5 (ENSMMNG00015001602) #18	DPY19L3 (ENSMMNG00015001544) #19	ZNF507 (ENSMMNG00015001504) #20	TSHZ3 (ENSMMNG00015001458) #22	ZNF536 (ENSMMNG00015001436) #23	URI1 (ENSMMNG00015001385) #24	CCNE1 (ENSMMNG00015001304) #25	C19orf12 (ENSMMNG00015001260) #26	PLEKHF1 (ENSMMNG00015001239) #27	POP4 (ENSMMNG00015001208) #28	VSTM2B (ENSMMNG00015001182)	UQCRFS1 (ENSMMNG00015001165) #29	SHCBP1 (ENSMMNG00015001117) #31	VPS35 (ENSMMNG00015001063) #32	ENSMMNG00015001005 #33	MYLK3 (ENSMMNG00015000932) #34	C16orf87 (ENSMMNG00015000869) #35	GPT2 (ENSMMNG00015000815) #36	DNAJA2 (ENSMMNG00015000782) #37
Vaquita	MODERN SPECIES	10	LRP3 (ENSPSNG00000019712) #7	WDR88 (ENSPSNG00000019754) #8	GPATCH1 (ENSPSNG00000019894) #9	RHPN2 (ENSPSNG00000019928) #10	FAAP24 (ENSPSNG00000019954) #11	CEP89 (ENSPSNG00000019994) #12	ENSPSNG00000020046	SLC7A9 (ENSPSNG00000020070) #13	TDRD12 (ENSPSNG00000020182) #14	NUDT19 (ENSPSNG00000020373) #15	RGS9BP (ENSPSNG00000020384) #16	ANKRD27 (ENSPSNG00000020465) #17	ENSPSNG00000020582 #18	DPY19L3 (ENSPSNG00000020640) #19	ZNF507 (ENSPSNG00000020685) #20	TSHZ3 (ENSPSNG00000020733) #22	ZNF536 (ENSPSNG00000020763) #23	URI1 (ENSPSNG00000020804) #24	CCNE1 (ENSPSNG00000020886) #25	C19orf12 (ENSPSNG00000020941) #26	PLEKHF1 (ENSPSNG00000020975) #27	POP4 (ENSPSNG00000020993) #28	VSTM2B (ENSPSNG00000021024)	UQCRFS1 (ENSPSNG00000021044) #29	SHCBP1 (ENSPSNG00000021057) #31	VPS35 (ENSPSNG00000021085) #32	ENSPSNG00000021135 #33	MYLK3 (ENSPSNG00000021168) #34	C16orf87 (ENSPSNG00000021234) #35	GPT2 (ENSPSNG00000021261) #36	DNAJA2 (ENSPSNG00000021284) #37
Dolphin	MODERN SPECIES	4510																TSHZ3 (ENSTTRG00000007910) #22
Sperm whale	MODERN SPECIES	8	WDR88 (ENSPCTG00005014581) #8	GPATCH1 (ENSPCTG00005014911) #9	RHPN2 (ENSPCTG00005014981) #10	ENSPCTG00005015197	FAAP24 (ENSPCTG00005015251) #11	CEP89 (ENSPCTG00005015339) #12	SLC7A9 (ENSPCTG00005015420) #13	TDRD12 (ENSPCTG00005015644) #14	NUDT19 (ENSPCTG00005016540) #15	RGS9BP (ENSPCTG00005016564) #16	ANKRD27 (ENSPCTG00005016618) #17	PDCD5 (ENSPCTG00005016856) #18	DPY19L3 (ENSPCTG00005017005) #19	ZNF507 (ENSPCTG00005017138) #20	ENSPCTG00005017174	TSHZ3 (ENSPCTG00005017204) #22	ZNF536 (ENSPCTG00005017245) #23	URI1 (ENSPCTG00005017313) #24	ENSPCTG00005017597	CCNE1 (ENSPCTG00005017668) #25	C17H19orf12 (ENSPCTG00005017766) #26	PLEKHF1 (ENSPCTG00005017836) #27	POP4 (ENSPCTG00005017854) #28	VSTM2B (ENSPCTG00005017910)	ENSPCTG00005017977 #29	ENSPCTG00005018104	ENSPCTG00005018116	SHCBP1 (ENSPCTG00005018139) #31	MYLK3 (ENSPCTG00005018229) #32	ORC6 (ENSPCTG00005018581) #33	C16orf87 (ENSPCTG00005018678) #35
Blue whale	MODERN SPECIES	10	LRP3 (ENSBMSG00010017500) #7	WDR88 (ENSBMSG00010017527) #8	GPATCH1 (ENSBMSG00010017658) #9	RHPN2 (ENSBMSG00010017698) #10	FAAP24 (ENSBMSG00010017784) #11	CEP89 (ENSBMSG00010017830) #12	SLC7A9 (ENSBMSG00010017871) #13	ENSBMSG00010017925	NUDT19 (ENSBMSG00010017985) #15	RGS9BP (ENSBMSG00010017993) #16	ANKRD27 (ENSBMSG00010018041) #17	ENSBMSG00010018205 #18	DPY19L3 (ENSBMSG00010018255) #19	ZNF507 (ENSBMSG00010018417) #20	ENSBMSG00010018457	TSHZ3 (ENSBMSG00010018482) #22	ZNF536 (ENSBMSG00010018499) #23	URI1 (ENSBMSG00010018529) #24	CCNE1 (ENSBMSG00010018593) #25	ENSBMSG00010018694 #26	PLEKHF1 (ENSBMSG00010018715) #27	POP4 (ENSBMSG00010018728) #28	VSTM2B (ENSBMSG00010018756)	UQCRFS1 (ENSBMSG00010018781) #29	SHCBP1 (ENSBMSG00010018800) #31	ENSBMSG00010018825	VPS35 (ENSBMSG00010018847) #32	ORC6 (ENSBMSG00010018899) #33	MYLK3 (ENSBMSG00010018990) #34	C16orf87 (ENSBMSG00010019068) #35	GPT2 (ENSBMSG00010019103) #36
Suina	ANCESTRAL SPECIES	2	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Chacoan peccary	MODERN SPECIES	104	RHPN2 (ENSCWAG00000001061) #10	FAAP24 (ENSCWAG00000001092) #11	CEP89 (ENSCWAG00000001114) #12	SLC7A9 (ENSCWAG00000001135) #13	TDRD12 (ENSCWAG00000001230) #14	ENSCWAG00000001479	ENSCWAG00000001495	ENSCWAG00000001506	NUDT19 (ENSCWAG00000001513) #15	RGS9BP (ENSCWAG00000001525) #16	ANKRD27 (ENSCWAG00000001538) #17	ENSCWAG00000001578 #18	DPY19L3 (ENSCWAG00000001605) #19	ENSCWAG00000001629	ZNF507 (ENSCWAG00000001636) #20	TSHZ3 (ENSCWAG00000001647) #22	ENSCWAG00000001653	ZNF536 (ENSCWAG00000001663) #23	URI1 (ENSCWAG00000001670) #24	CCNE1 (ENSCWAG00000001690) #25	C19orf12 (ENSCWAG00000001799) #26	PLEKHF1 (ENSCWAG00000001825) #27	POP4 (ENSCWAG00000001837) #28	VSTM2B (ENSCWAG00000001853)	UQCRFS1 (ENSCWAG00000001869) #29	SHCBP1 (ENSCWAG00000001888) #31	VPS35 (ENSCWAG00000001902) #32	ORC6 (ENSCWAG00000001931) #33	MYLK3 (ENSCWAG00000001954) #34	ENSCWAG00000001992	ENSCWAG00000002014
Pig	MODERN SPECIES	14	SLC7A10 (ENSSSCG00000002864)	LRP3 (ENSSSCG00000002863) #7	WDR88 (ENSSSCG00000002862) #8	GPATCH1 (ENSSSCG00000002865) #9	RHPN2 (ENSSSCG00000022312) #10	FAAP24 (ENSSSCG00000040905) #11	CEP89 (ENSSSCG00000025152) #12	SLC7A9 (ENSSSCG00000022948) #13	TDRD12 (ENSSSCG00000002857) #14	NUDT19 (ENSSSCG00000036294) #15	RGS9BP (ENSSSCG00000051830) #16	ANKRD27 (ENSSSCG00000002859) #17	PDCD5 (ENSSSCG00000002860) #18	DPY19L3 (ENSSSCG00000022521) #19	ZNF507 (ENSSSCG00000025139) #20	TSHZ3 (ENSSSCG00000025214) #22	ZNF536 (ENSSSCG00000029234) #23	URI1 (ENSSSCG00000025912) #24	ENSSSCG00000002855 #25	C19orf12 (ENSSSCG00000032153) #26	PLEKHF1 (ENSSSCG00000002852) #27	POP4 (ENSSSCG00000002854) #28	VSTM2B (ENSSSCG00000023921)	UQCRFS1 (ENSSSCG00000027085) #29	ENSSSCG00000038906	ENSSSCG00000002850	SHCBP1 (ENSSSCG00000002849) #31	VPS35 (ENSSSCG00000026239) #32	ORC6 (ENSSSCG00000024443) #33	MYLK3 (ENSSSCG00000036874) #34	C16orf87 (ENSSSCG00000022333) #35
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00940000169413	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Carnivora	ANCESTRAL SPECIES	2	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00940000169413	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Caniformia	ANCESTRAL SPECIES	1	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00940000169413	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077.i #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014.d #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Ursidae	ANCESTRAL SPECIES	8	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000156256 #25	ENSGT00390000009077.i #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014.d #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36
Ursus	ANCESTRAL SPECIES	198			ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00390000008610.a.b.a.a.a	ENSGT00940000156256 #25	ENSGT00390000010067.h #28	ENSGT00390000009077.j.a.b #26
American black bear	MODERN SPECIES	340																TSHZ3 (ENSUAMG00000019097) #22
Polar bear	MODERN SPECIES	155				SLC7A10 (ENSUMAG00000014779)	WDR88 (ENSUMAG00000014767) #8	GPATCH1 (ENSUMAG00000014645) #9	RHPN2 (ENSUMAG00000014602) #10	FAAP24 (ENSUMAG00000014600) #11	CEP89 (ENSUMAG00000014588) #12	SLC7A9 (ENSUMAG00000014340) #13	TDRD12 (ENSUMAG00000014314) #14	ANKRD27 (ENSUMAG00000013702) #17	PDCD5 (ENSUMAG00000013611) #18	DPY19L3 (ENSUMAG00000013572) #19	ZNF507 (ENSUMAG00000013564) #20	TSHZ3 (ENSUMAG00000013540) #22	ZNF536 (ENSUMAG00000013502) #23	URI1 (ENSUMAG00000013495) #24	ENSUMAG00000013491	CCNE1 (ENSUMAG00000013484) #25	ENSUMAG00000013482 #28	ENSUMAG00000013478 #26	ENSUMAG00000013469 #26
Giant Panda	MODERN SPECIES	3	SLC7A10 (ENSAMEG00000008261)	LRP3 (ENSAMEG00000024584) #7	WDR88 (ENSAMEG00000008257) #8	GPATCH1 (ENSAMEG00000015575) #9	RHPN2 (ENSAMEG00000015528) #10	FAAP24 (ENSAMEG00000015524) #11	CEP89 (ENSAMEG00000015514) #12	SLC7A9 (ENSAMEG00000015459) #13	ENSAMEG00000009847	NUDT19 (ENSAMEG00000009842) #15	RGS9BP (ENSAMEG00000028432) #16	ANKRD27 (ENSAMEG00000009784) #17	PDCD5 (ENSAMEG00000009766) #18	DPY19L3 (ENSAMEG00000009748) #19	ZNF507 (ENSAMEG00000009742) #20	TSHZ3 (ENSAMEG00000009733) #22	ZNF536 (ENSAMEG00000009725) #23	URI1 (ENSAMEG00000009637) #24	ENSAMEG00000007309	CCNE1 (ENSAMEG00000009668) #25	ENSAMEG00000030806 #26	PLEKHF1 (ENSAMEG00000019032) #27	ENSAMEG00000003172 #28	ENSAMEG00000027559	VSTM2B (ENSAMEG00000027962)	ENSAMEG00000018330 #29	ENSAMEG00000018332 #31	ENSAMEG00000018344 #32	ORC6 (ENSAMEG00000018347) #33	MYLK3 (ENSAMEG00000000866) #34	C16orf87 (ENSAMEG00000000887) #35
Mustelinae	ANCESTRAL SPECIES	49	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077.i #26	ENSGT00940000160728 #27
Ferret	MODERN SPECIES	272	SLC7A10 (ENSMPUG00000007598)	LRP3 (ENSMPUG00000007608) #7	WDR88 (ENSMPUG00000007632) #8	GPATCH1 (ENSMPUG00000007658) #9	RHPN2 (ENSMPUG00000007671) #10	FAAP24 (ENSMPUG00000007678) #11	CEP89 (ENSMPUG00000007682) #12	SLC7A9 (ENSMPUG00000007696) #13	TDRD12 (ENSMPUG00000007791) #14	NUDT19 (ENSMPUG00000007814) #15	RGS9BP (ENSMPUG00000018943) #16	ANKRD27 (ENSMPUG00000007821) #17	PDCD5 (ENSMPUG00000007931) #18	DPY19L3 (ENSMPUG00000007958) #19	ZNF507 (ENSMPUG00000007979) #20	TSHZ3 (ENSMPUG00000007986) #22	ZNF536 (ENSMPUG00000007989) #23	ENSMPUG00000007994	URI1 (ENSMPUG00000008002) #24	ENSMPUG00000008009	CCNE1 (ENSMPUG00000008012) #25	ENSMPUG00000008025 #26	PLEKHF1 (ENSMPUG00000018950) #27	ENSMPUG00000008033	ENSMPUG00000008041 #28	ENSMPUG00000008050	ENSMPUG00000008056 #26	ENSMPUG00000008063 #28	ENSMPUG00000008129 #26	ENSMPUG00000008141 #28	VSTM2B (ENSMPUG00000008146)
American mink	MODERN SPECIES	95	SLC7A10 (ENSNVIG00000019536)	LRP3 (ENSNVIG00000019559) #7	WDR88 (ENSNVIG00000019568) #8	GPATCH1 (ENSNVIG00000019604) #9	RHPN2 (ENSNVIG00000019645) #10	FAAP24 (ENSNVIG00000019668) #11	CEP89 (ENSNVIG00000019683) #12	SLC7A9 (ENSNVIG00000019724) #13	ENSNVIG00000019776	NUDT19 (ENSNVIG00000019811) #15	RGS9BP (ENSNVIG00000019820) #16	ANKRD27 (ENSNVIG00000019825) #17	PDCD5 (ENSNVIG00000019867) #18	D19L3 (ENSNVIG00000019918) #19	ZNF507 (ENSNVIG00000019975) #20	TSHZ3 (ENSNVIG00000019995) #22	ZNF536 (ENSNVIG00000020006) #23	URI1 (ENSNVIG00000020030) #24	CCNE1 (ENSNVIG00000020059) #25	ENSNVIG00000020090 #26	PLEKHF1 (ENSNVIG00000020098) #27	ENSNVIG00000020103 #28	ENSNVIG00000020109 #26
Canidae	ANCESTRAL SPECIES	5	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00940000169413	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29
Canis_lupus	ANCESTRAL SPECIES		ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00940000169413	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29
Dingo	MODERN SPECIES	125	LRP3 (ENSCAFG00020019720) #7	GPATCH1 (ENSCAFG00020019731) #9	RHPN2 (ENSCAFG00020019742) #10	ENSCAFG00020019744 #11	ENSCAFG00020019747	CEP89 (ENSCAFG00020019752) #12	SLC7A9 (ENSCAFG00020019778) #13	TDRD12 (ENSCAFG00020019790) #14	NUDT19 (ENSCAFG00020019828) #15	RGS9BP (ENSCAFG00020019830) #16	ANKRD27 (ENSCAFG00020019831) #17	ENSCAFG00020019841 #18	DPY19L3 (ENSCAFG00020019865) #19	ZNF507 (ENSCAFG00020019878) #20	ENSCAFG00020019907	TSHZ3 (ENSCAFG00020019912) #22	ENSCAFG00020019927 #23	URI1 (ENSCAFG00020019949) #24	ENSCAFG00020019950	CCNE1 (ENSCAFG00020019952) #25	C19orf12 (ENSCAFG00020019957) #26	PLEKHF1 (ENSCAFG00020019960) #27	ENSCAFG00020019964 #28	VSTM2B (ENSCAFG00020019965)	UQCRFS1 (ENSCAFG00020019969) #29	ENSCAFG00020019987
Dog	MODERN SPECIES		LRP3 (ENSCAFG00845000195) #7	WDR88 (ENSCAFG00845000209) #8	GPATCH1 (ENSCAFG00845000257) #9	RHPN2 (ENSCAFG00845000287) #10	FAAP24 (ENSCAFG00845000331) #11	CEP89 (ENSCAFG00845000371) #12	SLC7A9 (ENSCAFG00845000428) #13	TDRD12 (ENSCAFG00845000471) #14	NUDT19 (ENSCAFG00845000516) #15	ENSCAFG00845000530	RGS9BP (ENSCAFG00845000547) #16	ANKRD27 (ENSCAFG00845000589) #17	ENSCAFG00845000680 #18	DPY19L3 (ENSCAFG00845000789) #19	ZNF507 (ENSCAFG00845000880) #20	TSHZ3 (ENSCAFG00845000908) #22	ZNF536 (ENSCAFG00845000976) #23	URI1 (ENSCAFG00845001063) #24	CCNE1 (ENSCAFG00845001129) #25	C19orf12 (ENSCAFG00845001166) #26	PLEKHF1 (ENSCAFG00845001176) #27	POP4 (ENSCAFG00845001208) #28	ENSCAFG00845001253	UQCRFS1 (ENSCAFG00845001274) #29
Red fox	MODERN SPECIES	80	CEBPA (ENSVVUG00000016555)	SLC7A10 (ENSVVUG00000016564)	ENSVVUG00000016565 #7	WDR88 (ENSVVUG00000016568) #8	GPATCH1 (ENSVVUG00000016572) #9	RHPN2 (ENSVVUG00000016587) #10	FAAP24 (ENSVVUG00000016604) #11	CEP89 (ENSVVUG00000016607) #12	SLC7A9 (ENSVVUG00000016626) #13	TDRD12 (ENSVVUG00000016637) #14	ENSVVUG00000016685 #16	ANKRD27 (ENSVVUG00000016689) #17	ENSVVUG00000016712 #18	DPY19L3 (ENSVVUG00000016714) #19	ZNF507 (ENSVVUG00000016742) #20	TSHZ3 (ENSVVUG00000016783) #22	ZNF536 (ENSVVUG00000016804) #23	URI1 (ENSVVUG00000016834) #24	CCNE1 (ENSVVUG00000016850) #25	CUNH19orf12 (ENSVVUG00000016868) #26	PLEKHF1 (ENSVVUG00000016871) #27	ENSVVUG00000016876 #28	ENSVVUG00000016882
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00940000153609.b.y.b	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Panthera	ANCESTRAL SPECIES	10	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00940000153609.b.y.b	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014.b #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Tiger	MODERN SPECIES	547	ENSPTIG00000021511	SLC7A10 (ENSPTIG00000021296)	ENSPTIG00000021208	WDR88 (ENSPTIG00000020346) #8	GPATCH1 (ENSPTIG00000019649) #9	RHPN2 (ENSPTIG00000018334) #10	FAAP24 (ENSPTIG00000017907) #11	ENSPTIG00000016120	CEP89 (ENSPTIG00000015712) #12	SLC7A9 (ENSPTIG00000011909) #13	ENSPTIG00000011285	ANKRD27 (ENSPTIG00000008026) #17	PDCD5 (ENSPTIG00000007586) #18	DPY19L3 (ENSPTIG00000005956) #19	ZNF507 (ENSPTIG00000000684) #20	TSHZ3 (ENSPTIG00000000029) #22	ZNF536 (ENSPTIG00000020883) #23	URI1 (ENSPTIG00000020114) #24	CCNE1 (ENSPTIG00000018249) #25	C19orf12 (ENSPTIG00000017039) #26	POP4 (ENSPTIG00000016598) #28	UQCRFS1 (ENSPTIG00000016425) #29	SHCBP1 (ENSPTIG00000015014) #31	VPS35 (ENSPTIG00000014402) #32	ORC6 (ENSPTIG00000013837) #33	ENSPTIG00000013190 #34	C16orf87 (ENSPTIG00000012961) #35	GPT2 (ENSPTIG00000011669) #36	DNAJA2 (ENSPTIG00000011350) #37	NETO2 (ENSPTIG00000009224)	ITFG1 (ENSPTIG00000007464)
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00940000153609.b.y.b	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014.b #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
lion	MODERN SPECIES	15	ENSPLOG00000010083	GPATCH1 (ENSPLOG00000010167) #9	RHPN2 (ENSPLOG00000010204) #10	ENSPLOG00000010286	FAAP24 (ENSPLOG00000010325) #11	CEP89 (ENSPLOG00000010392) #12	ENSPLOG00000010558	SLC7A9 (ENSPLOG00000010593) #13	TDRD12 (ENSPLOG00000010712) #14	NUDT19 (ENSPLOG00000011007) #15	RGS9BP (ENSPLOG00000011038) #16	ANKRD27 (ENSPLOG00000011124) #17	PDCD5 (ENSPLOG00000011297) #18	DPY19L3 (ENSPLOG00000011402) #19	ZNF507 (ENSPLOG00000011521) #20	TSHZ3 (ENSPLOG00000011553) #22	ZNF536 (ENSPLOG00000011645) #23	URI1 (ENSPLOG00000011692) #24	CCNE1 (ENSPLOG00000011784) #25	C19orf12 (ENSPLOG00000011863) #26	PLEKHF1 (ENSPLOG00000011934) #27	POP4 (ENSPLOG00000011961) #28	VSTM2B (ENSPLOG00000012006)	UQCRFS1 (ENSPLOG00000012069) #29	SHCBP1 (ENSPLOG00000012099) #31	VPS35 (ENSPLOG00000012152) #32	ORC6 (ENSPLOG00000012223) #33	MYLK3 (ENSPLOG00000012295) #34	C16orf87 (ENSPLOG00000012519) #35	ENSPLOG00000012572	GPT2 (ENSPLOG00000012599) #36
leopard	MODERN SPECIES	93	WDR88 (ENSPPRG00000015927) #8	GPATCH1 (ENSPPRG00000017245) #9	RHPN2 (ENSPPRG00000024049) #10	FAAP24 (ENSPPRG00000023535) #11	ENSPPRG00000023275	CEP89 (ENSPPRG00000022947) #12	SLC7A9 (ENSPPRG00000000104) #13	TDRD12 (ENSPPRG00000002389) #14	NUDT19 (ENSPPRG00000002593) #15	RGS9BP (ENSPPRG00000014110) #16	ANKRD27 (ENSPPRG00000003812) #17	PDCD5 (ENSPPRG00000004706) #18	DPY19L3 (ENSPPRG00000005613) #19	ENSPPRG00000006120	ZNF507 (ENSPPRG00000006540) #20	TSHZ3 (ENSPPRG00000006783) #22	ZNF536 (ENSPPRG00000007049) #23	URI1 (ENSPPRG00000007736) #24	CCNE1 (ENSPPRG00000008532) #25	C19orf12 (ENSPPRG00000009538) #26	PLEKHF1 (ENSPPRG00000014328) #27	POP4 (ENSPPRG00000010502) #28	VSTM2B (ENSPPRG00000010886)	ENSPPRG00000011021 #29
Cat	MODERN SPECIES	246	WDR88 (ENSFCAG00000030222) #8	GPATCH1 (ENSFCAG00000014917) #9	RHPN2 (ENSFCAG00000014916) #10	ENSFCAG00000033650	FAAP24 (ENSFCAG00000022497) #11	CEP89 (ENSFCAG00000014915) #12	ENSFCAG00000027289	SLC7A9 (ENSFCAG00000014914) #13	TDRD12 (ENSFCAG00000014913) #14	NUDT19 (ENSFCAG00000045759) #15	RGS9BP (ENSFCAG00000046519) #16	ANKRD27 (ENSFCAG00000002328) #17	PDCD5 (ENSFCAG00000002326) #18	DPY19L3 (ENSFCAG00000025600) #19	ZNF507 (ENSFCAG00000010663) #20	TSHZ3 (ENSFCAG00000004896) #22	ZNF536 (ENSFCAG00000014303) #23	ENSFCAG00000051573	URI1 (ENSFCAG00000022885) #24	CCNE1 (ENSFCAG00000001624) #25	C19orf12 (ENSFCAG00000034096) #26	PLEKHF1 (ENSFCAG00000024981) #27	POP4 (ENSFCAG00000001619) #28	VSTM2B (ENSFCAG00000011103)	UQCRFS1 (ENSFCAG00000027292) #29	SHCBP1 (ENSFCAG00000011798) #31	VPS35 (ENSFCAG00000001383) #32	ORC6 (ENSFCAG00000024275) #33	MYLK3 (ENSFCAG00000001388) #34	ENSFCAG00000042208 #35	ENSFCAG00000038831
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00990000204193
Equus	ANCESTRAL SPECIES	1	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000158965.a.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT01100000266640	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29
Donkey	MODERN SPECIES	18	GPATCH1 (ENSEASG00005021162) #9	RHPN2 (ENSEASG00005021118) #10	FAAP24 (ENSEASG00005025311) #11	CEP89 (ENSEASG00005021099) #12	ENSEASG00005021086	SLC7A9 (ENSEASG00005021090) #13	TDRD12 (ENSEASG00005021053) #14	NUDT19 (ENSEASG00005033299) #15	RGS9BP (ENSEASG00005021029) #16	ANKRD27 (ENSEASG00005021017) #17	PDCD5 (ENSEASG00005026088) #18	ENSEASG00005033053	DPY19L3 (ENSEASG00005021008) #19	ENSEASG00005034115 #19	ZNF507 (ENSEASG00005020999) #20	TSHZ3 (ENSEASG00005020984) #22	ZNF536 (ENSEASG00005020978) #23	URI1 (ENSEASG00005020967) #24	CCNE1 (ENSEASG00005020958) #25	C19orf12 (ENSEASG00005033066) #26	PLEKHF1 (ENSEASG00005026468) #27	POP4 (ENSEASG00005024499) #28	VSTM2B (ENSEASG00005020939)	ENSEASG00005020935 #29	ENSEASG00005029138	ENSEASG00005024864	ENSEASG00005029556	ENSEASG00005025675
Horse	MODERN SPECIES	1	LRP3 (ENSECAG00000010409) #7	WDR88 (ENSECAG00000008371) #8	GPATCH1 (ENSECAG00000022743) #9	RHPN2 (ENSECAG00000010312) #10	FAAP24 (ENSECAG00000008757) #11	CEP89 (ENSECAG00000020513) #12	ENSECAG00000049232	SLC7A9 (ENSECAG00000009914) #13	TDRD12 (ENSECAG00000037516) #14	NUDT19 (ENSECAG00000045404) #15	ANKRD27 (ENSECAG00000019736) #17	PDCD5 (ENSECAG00000019406) #18	ENSECAG00000037924	DPY19L3 (ENSECAG00000000212) #19	ZNF507 (ENSECAG00000017052) #20	TSHZ3 (ENSECAG00000016274) #22	ENSECAG00000015459	ZNF536 (ENSECAG00000013732) #23	URI1 (ENSECAG00000007717) #24	CCNE1 (ENSECAG00000021289) #25	C10H19orf12 (ENSECAG00000021258) #26	PLEKHF1 (ENSECAG00000039032) #27	POP4 (ENSECAG00000020206) #28	VSTM2B (ENSECAG00000026831)	UQCRFS1 (ENSECAG00000004824) #29
Chiroptera	ANCESTRAL SPECIES	21														ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Megabat	MODERN SPECIES	243																TSHZ3 (ENSPVAG00000003220) #22
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00940000159115	ENSGT01030000234510.b	ENSGT00390000005563	ENSGT00390000003058.b.a.b	ENSGT00390000007852	ENSGT00940000158841	ENSGT00390000015057	ENSGT00530000063956.b.a	ENSGT00940000158102	ENSGT00390000014546	ENSGT00950000182832.D.a	ENSGT00940000159615	ENSGT00940000160442	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Microbat	MODERN SPECIES	1522																TSHZ3 (ENSMLUG00000029075) #22
Greater horseshoe bat	MODERN SPECIES	6	TUBB3 (ENSRFEG00010011101)	MC1R (ENSRFEG00010011233)	TCF25 (ENSRFEG00010011256)	SPIRE2 (ENSRFEG00010011334)	FANCA (ENSRFEG00010011772)	ZNF276 (ENSRFEG00010011958)	VPS9D1 (ENSRFEG00010011985)	SPATA2L (ENSRFEG00010012009)	CDK10 (ENSRFEG00010012042)	ENSRFEG00010012104	CHMP1A (ENSRFEG00010012202)	DPEP1 (ENSRFEG00010012303)	ENSRFEG00010012352	DPY19L3 (ENSRFEG00010012453) #19	ZNF507 (ENSRFEG00010012577) #20	TSHZ3 (ENSRFEG00010012616) #22	ZNF536 (ENSRFEG00010012717) #23	URI1 (ENSRFEG00010012794) #24	CCNE1 (ENSRFEG00010012966) #25	C19orf12 (ENSRFEG00010013119) #26	PLEKHF1 (ENSRFEG00010013255) #27	POP4 (ENSRFEG00010013270) #28	VSTM2B (ENSRFEG00010013347)	UQCRFS1 (ENSRFEG00010013392) #29	SHCBP1 (ENSRFEG00010013445) #31	VPS35 (ENSRFEG00010013687) #32	ORC6 (ENSRFEG00010013754) #33	MYLK3 (ENSRFEG00010013868) #34	C16orf87 (ENSRFEG00010013924) #35	GPT2 (ENSRFEG00010014039) #36	DNAJA2 (ENSRFEG00010014129) #37
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00950000183051.b.a #22
Hedgehog	MODERN SPECIES	11417																TSHZ3 (ENSEEUG00000004335) #22
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00940000169413	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36
Primates	ANCESTRAL SPECIES	28	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00940000169413	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29
Strepsirrhini	ANCESTRAL SPECIES	36	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29
Bushbaby	MODERN SPECIES	250	LRP3 (ENSOGAG00000034429) #7	WDR88 (ENSOGAG00000004017) #8	GPATCH1 (ENSOGAG00000004016) #9	RHPN2 (ENSOGAG00000001578) #10	FAAP24 (ENSOGAG00000001576) #11	CEP89 (ENSOGAG00000001573) #12	SLC7A9 (ENSOGAG00000012118) #13	TDRD12 (ENSOGAG00000001571) #14	NUDT19 (ENSOGAG00000026276) #15	RGS9BP (ENSOGAG00000032941) #16	ANKRD27 (ENSOGAG00000015112) #17	PDCD5 (ENSOGAG00000025274) #18	ENSOGAG00000033236	DPY19L3 (ENSOGAG00000002677) #19	ZNF507 (ENSOGAG00000002674) #20	TSHZ3 (ENSOGAG00000032636) #22	ZNF536 (ENSOGAG00000003997) #23	URI1 (ENSOGAG00000015310) #24	ENSOGAG00000025344	CCNE1 (ENSOGAG00000006217) #25	C19orf12 (ENSOGAG00000012719) #26	PLEKHF1 (ENSOGAG00000033399) #27	POP4 (ENSOGAG00000011168) #28	VSTM2B (ENSOGAG00000029203)	UQCRFS1 (ENSOGAG00000026492) #29
Lemuriformes	ANCESTRAL SPECIES	29	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29
Lemuriformes_a	ANCESTRAL SPECIES	158	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00950000186085	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29
Coquerels sifaka	MODERN SPECIES	363	CEBPG (ENSPCOG00000025828)	SLC7A10 (ENSPCOG00000008563)	LRP3 (ENSPCOG00000021536) #7	WDR88 (ENSPCOG00000025378) #8	GPATCH1 (ENSPCOG00000009674) #9	RHPN2 (ENSPCOG00000016163) #10	FAAP24 (ENSPCOG00000020206) #11	CEP89 (ENSPCOG00000009646) #12	ENSPCOG00000011220	SLC7A9 (ENSPCOG00000026968) #13	TDRD12 (ENSPCOG00000023600) #14	ANKRD27 (ENSPCOG00000013416) #17	ENSPCOG00000017218 #18	DPY19L3 (ENSPCOG00000016162) #19	ZNF507 (ENSPCOG00000017580) #20	TSHZ3 (ENSPCOG00000023437) #22	ZNF536 (ENSPCOG00000017326) #23	URI1 (ENSPCOG00000019426) #24	CCNE1 (ENSPCOG00000000361) #25	C19orf12 (ENSPCOG00000002733) #26	POP4 (ENSPCOG00000018055) #28	VSTM2B (ENSPCOG00000015905)	UQCRFS1 (ENSPCOG00000015205) #29
Greater bamboo lemur	MODERN SPECIES	775	WDR88 (ENSPSMG00000014901) #8	GPATCH1 (ENSPSMG00000014950) #9	RHPN2 (ENSPSMG00000014984) #10	FAAP24 (ENSPSMG00000014997) #11	CEP89 (ENSPSMG00000015002) #12	SLC7A9 (ENSPSMG00000015023) #13	TDRD12 (ENSPSMG00000015114) #14	NUDT19 (ENSPSMG00000015148) #15	ENSPSMG00000015151	RGS9BP (ENSPSMG00000015153) #16	ANKRD27 (ENSPSMG00000015253) #17	ENSPSMG00000015281	PDCD5 (ENSPSMG00000015313) #18	DPY19L3 (ENSPSMG00000015366) #19	ZNF507 (ENSPSMG00000015392) #20	TSHZ3 (ENSPSMG00000015407) #22	ENSPSMG00000015427	ZNF536 (ENSPSMG00000015452) #23	URI1 (ENSPSMG00000015493) #24	CCNE1 (ENSPSMG00000015575) #25
Mouse lemur	MODERN SPECIES	14	LRP3 (ENSMICG00000032993) #7	WDR88 (ENSMICG00000017262) #8	GPATCH1 (ENSMICG00000004829) #9	ENSMICG00000028269	RHPN2 (ENSMICG00000003663) #10	FAAP24 (ENSMICG00000044088) #11	CEP89 (ENSMICG00000003646) #12	SLC7A9 (ENSMICG00000046921) #13	TDRD12 (ENSMICG00000003623) #14	NUDT19 (ENSMICG00000037570) #15	ENSMICG00000000420 #17	ENSMICG00000041547 #17	PDCD5 (ENSMICG00000000417) #18	DPY19L3 (ENSMICG00000012369) #19	ZNF507 (ENSMICG00000012333) #20	TSHZ3 (ENSMICG00000027677) #22	ZNF536 (ENSMICG00000035640) #23	URI1 (ENSMICG00000006756) #24	ENSMICG00000036638	CCNE1 (ENSMICG00000006777) #25	C19orf12 (ENSMICG00000046460) #26	PLEKHF1 (ENSMICG00000015447) #27	POP4 (ENSMICG00000035730) #28	VSTM2B (ENSMICG00000044409)	UQCRFS1 (ENSMICG00000027906) #29
Haplorrhini	ANCESTRAL SPECIES	35	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00940000169413	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00940000169413	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643	ENSGT00390000008152.B.a
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00940000169413	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000154453.b.a.a.a.b	ENSGT00940000154940.qb	ENSGT00940000153236.b.b.b.a.a.a.a.a.a.a	ENSGT00940000161942.a.a.a.a.b	ENSGT00940000153236.b.a.a.b.b.a.b	ENSGT00940000154251.A.b.b.a.b.b	ENSGT00940000153236.b.b.b.a.a.b.a.a
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00940000169413	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000154453.b.a.a.a.b	ENSGT00940000159345.o	ENSGT00940000153236.b.a.a.b.b.b	ENSGT00940000153236.b.a.a.b.b.a.b	ENSGT00940000154251.A.b.b.a.b.b	ENSGT00940000153236.b.b.b.a.a.b.a.a	ENSGT01100000263507.E.b.b.c.a
Hominidae	ANCESTRAL SPECIES		ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000154453.b.a.a.a.b	ENSGT00940000159345.o	ENSGT00940000153236.b.a.a.b.b.b	ENSGT00940000153236.b.a.a.b.b.a.b	ENSGT00940000154251.A.b.b.a.b.b	ENSGT01100000263507.E.b.b.c.a	ENSGT00940000153236.b.b.b.b.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b.u.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00940000155097.w.a	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000159345.o	ENSGT00940000153236.b.a.a.b.b.b	ENSGT00940000153236.b.a.a.b.b.a.b	ENSGT00940000154251.A.b.b.a.b.b	ENSGT00940000153236.b.b.b.b.b	ENSGT00940000163381.a.e.b
Gorilla	MODERN SPECIES	10	WDR88 (ENSGGOG00000009952) #8	GPATCH1 (ENSGGOG00000010862) #9	ENSGGOG00000013137 #10	ENSGGOG00000042319 #11	CEP89 (ENSGGOG00000014134) #12	SLC7A9 (ENSGGOG00000011960) #13	TDRD12 (ENSGGOG00000011938) #14	NUDT19 (ENSGGOG00000007785) #15	RGS9BP (ENSGGOG00000043355) #16	ANKRD27 (ENSGGOG00000008596) #17	ENSGGOG00000006169 #18	DPY19L3 (ENSGGOG00000009160) #19	ZNF507 (ENSGGOG00000010501) #20	ENSGGOG00000043441	ENSGGOG00000041898	TSHZ3 (ENSGGOG00000003676) #22	ZNF536 (ENSGGOG00000013640) #23	ENSGGOG00000025255	URI1 (ENSGGOG00000005886) #24	ENSGGOG00000037265	CCNE1 (ENSGGOG00000008452) #25	C19orf12 (ENSGGOG00000014142) #26	PLEKHF1 (ENSGGOG00000001698) #27	VSTM2B (ENSGGOG00000009691)	UQCRFS1 (ENSGGOG00000012978) #29	ENSGGOG00000025826	ZNF254 (ENSGGOG00000041266)	ZNF726 (ENSGGOG00000038878)	ZNF681 (ENSGGOG00000036199)	ENSGGOG00000036879	ENSGGOG00000040519
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b.u.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00940000155097.w.a	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000159345.o	ENSGT00940000153236.b.a.a.b.b.b	ENSGT00940000153236.b.a.a.b.b.a.b	ENSGT00940000154251.A.b.b.a.b.b	ENSGT00940000153236.b.b.b.b.b	ENSGT00940000163381.a.e.b
Pan	ANCESTRAL SPECIES	32	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b.u.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00940000155097.w.a	ENSGT00390000002362.m #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000159345.o	ENSGT00940000153236.b.a.a.b.b.b	ENSGT00940000153236.b.a.a.b.b.a.b	ENSGT00940000154251.A.b.b.a.b.b	ENSGT00940000153236.b.b.b.b.b	ENSGT00940000163381.a.e.b
Chimpanzee	MODERN SPECIES	10	LRP3 (ENSPTRG00000010806) #7	WDR88 (ENSPTRG00000010804) #8	GPATCH1 (ENSPTRG00000010803) #9	RHPN2 (ENSPTRG00000010801) #10	FAAP24 (ENSPTRG00000010798) #11	CEP89 (ENSPTRG00000010797) #12	SLC7A9 (ENSPTRG00000010796) #13	TDRD12 (ENSPTRG00000010795) #14	NUDT19 (ENSPTRG00000034496) #15	RGS9BP (ENSPTRG00000047454) #16	ANKRD27 (ENSPTRG00000010792) #17	PDCD5 (ENSPTRG00000010791) #18	DPY19L3 (ENSPTRG00000010790) #19	ZNF507 (ENSPTRG00000010789) #20	ENSPTRG00000048388	TSHZ3 (ENSPTRG00000010788) #22	ZNF536 (ENSPTRG00000010786) #23	ENSPTRG00000052821	ENSPTRG00000050716	URI1 (ENSPTRG00000010784) #24	CCNE1 (ENSPTRG00000010782) #25	C19H19orf12 (ENSPTRG00000010781) #26	PLEKHF1 (ENSPTRG00000010780) #27	POP4 (ENSPTRG00000010779) #28	VSTM2B (ENSPTRG00000010778)	UQCRFS1 (ENSPTRG00000010777) #29	ENSPTRG00000049554	ZNF254 (ENSPTRG00000019222)	ENSPTRG00000046645	ZNF681 (ENSPTRG00000043365)	ENSPTRG00000048149
Bonobo	MODERN SPECIES	10	SLC7A10 (ENSPPAG00000029338)	LRP3 (ENSPPAG00000036881) #7	WDR88 (ENSPPAG00000033383) #8	GPATCH1 (ENSPPAG00000020990) #9	RHPN2 (ENSPPAG00000039976) #10	FAAP24 (ENSPPAG00000031426) #11	CEP89 (ENSPPAG00000030028) #12	SLC7A9 (ENSPPAG00000040321) #13	TDRD12 (ENSPPAG00000042284) #14	ENSPPAG00000034507 #15	RGS9BP (ENSPPAG00000013767) #16	ANKRD27 (ENSPPAG00000035637) #17	ENSPPAG00000042320 #18	DPY19L3 (ENSPPAG00000028384) #19	ZNF507 (ENSPPAG00000042851) #20	TSHZ3 (ENSPPAG00000036336) #22	ZNF536 (ENSPPAG00000034794) #23	ENSPPAG00000037943	ENSPPAG00000032180 #24	CCNE1 (ENSPPAG00000039579) #25	C19orf12 (ENSPPAG00000029958) #26	ENSPPAG00000030231 #27	POP4 (ENSPPAG00000040372) #28	VSTM2B (ENSPPAG00000031848)	UQCRFS1 (ENSPPAG00000029945) #29	ENSPPAG00000042511	ENSPPAG00000030126	ZNF726 (ENSPPAG00000038380)	ZNF681 (ENSPPAG00000029602)	ENSPPAG00000025873	ENSPPAG00000043194
Human	MODERN SPECIES	10	SLC7A10 (ENSG00000130876)	LRP3 (ENSG00000130881) #7	WDR88 (ENSG00000166359) #8	GPATCH1 (ENSG00000076650) #9	RHPN2 (ENSG00000131941) #10	FAAP24 (ENSG00000131944) #11	CEP89 (ENSG00000121289) #12	SLC7A9 (ENSG00000021488) #13	TDRD12 (ENSG00000173809) #14	NUDT19 (ENSG00000213965) #15	RGS9BP (ENSG00000186326) #16	ANKRD27 (ENSG00000105186) #17	PDCD5 (ENSG00000105185) #18	DPY19L3 (ENSG00000178904) #19	ZNF507 (ENSG00000168813) #20	TSHZ3 (ENSG00000121297) #22	ZNF536 (ENSG00000198597) #23	URI1 (ENSG00000105176) #24	CCNE1 (ENSG00000105173) #25	C19orf12 (ENSG00000131943) #26	PLEKHF1 (ENSG00000166289) #27	POP4 (ENSG00000105171) #28	VSTM2B (ENSG00000187135)	UQCRFS1 (ENSG00000169021) #29	ZNF254 (ENSG00000213096)	ZNF726 (ENSG00000213967)	RPSA2 (ENSG00000288920)	ZNF681 (ENSG00000196172)	ZNF675 (ENSG00000197372)	ZNF91 (ENSG00000167232)	ENSG00000283201
Gibbon	MODERN SPECIES		LRP3 (ENSNLEG00000007676) #7	ENSNLEG00000035651 #8	GPATCH1 (ENSNLEG00000007659) #9	ENSNLEG00000030362 #10	ENSNLEG00000007654 #11	ENSNLEG00000033704	CEP89 (ENSNLEG00000007643) #12	SLC7A9 (ENSNLEG00000007638) #13	ENSNLEG00000007635 #14	NUDT19 (ENSNLEG00000007633) #15	RGS9BP (ENSNLEG00000033989) #16	ANKRD27 (ENSNLEG00000007615) #17	ENSNLEG00000033870 #18	DPY19L3 (ENSNLEG00000007610) #19	ENSNLEG00000007609	TSHZ3 (ENSNLEG00000007608) #22	ZNF536 (ENSNLEG00000007605) #23	ENSNLEG00000007600 #24	ENSNLEG00000032007	CCNE1 (ENSNLEG00000007599) #25	ENSNLEG00000033714 #26	PLEKHF1 (ENSNLEG00000034434) #27	ENSNLEG00000028526	VSTM2B (ENSNLEG00000007593)	UQCRFS1 (ENSNLEG00000007588) #29	ENSNLEG00000030634	ZNF254 (ENSNLEG00000034962)	ZNF726 (ENSNLEG00000028061)	ZNF681 (ENSNLEG00000026595)	ENSNLEG00000030674	ENSNLEG00000034498
Cercopithecidae	ANCESTRAL SPECIES	12	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000154453.b.a.a.a.b	ENSGT00940000154940.qb	ENSGT00940000153236.b.b.b.a.a.a.a.a.a.a	ENSGT00940000161942.a.a.a.a.b	ENSGT00940000153236.b.a.a.b.b.a.b	ENSGT00940000154251.A.b.b.a.b.b	ENSGT00940000153236.b.b.b.a.a.b.a.a
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000154453.b.a.a.a.b	ENSGT00940000161942.a.a.a.a.b.e.b	ENSGT00940000153236.b.a.a.b.b.a.b	ENSGT00940000154251.A.b.b.a.b.b	ENSGT00940000153236.b.b.b.a.a.b.a.a	ENSGT00940000163381.a	ENSGT00940000165698.B.a.a
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000156469.h	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000154453.b.a.a.a.b	ENSGT00940000153236.b.a.a.b.b.b	ENSGT00940000153236.b.b.b.a.a.b.a.a	ENSGT00940000154251.A.b.b.a.b.b	ENSGT00940000153236.b.a.a.b.b.a.b	ENSGT00940000161942.a.a.a.a.b.e.a	ENSGT00940000163381.a
Macaca	ANCESTRAL SPECIES	12	ENSGT00940000156469.h	ENSGT00940000160021 #7	ENSGT00940000162291.d #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362.i.a #24	ENSGT00390000002362.j #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014.h #29	ENSGT00940000154453.b.a.a.a.b	ENSGT00940000154915.j	ENSGT00940000153236.b.a.a.b.b.b	ENSGT00910000146855.h	ENSGT00940000153236.b.b.b.a.a.b.a.a	ENSGT00940000154251.A.b.b.a.b.b
Pig-tailed macaque	MODERN SPECIES	218	CEBPG (ENSMNEG00000026159)	SLC7A10 (ENSMNEG00000037424)	LRP3 (ENSMNEG00000024475) #7	WDR88 (ENSMNEG00000029027) #8	GPATCH1 (ENSMNEG00000045084) #9	RHPN2 (ENSMNEG00000032814) #10	FAAP24 (ENSMNEG00000016780) #11	CEP89 (ENSMNEG00000034589) #12	TDRD12 (ENSMNEG00000043067) #14	NUDT19 (ENSMNEG00000044868) #15	RGS9BP (ENSMNEG00000014719) #16	ANKRD27 (ENSMNEG00000042970) #17	PDCD5 (ENSMNEG00000033071) #18	DPY19L3 (ENSMNEG00000006138) #19	ZNF507 (ENSMNEG00000028743) #20	TSHZ3 (ENSMNEG00000033088) #22	ZNF536 (ENSMNEG00000036995) #23	ENSMNEG00000008907	ENSMNEG00000039852 #24
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000156469.g.b	ENSGT00940000162291.d #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT01100000263493.a.a.a.b.b.b.b.a.b.b.b.b	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362.i.a #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014.h #29	ENSGT00940000154453.b.a.a.a.b	ENSGT00940000154915.j	ENSGT00940000153236.b.a.a.b.b.b	ENSGT00910000146855.h	ENSGT00940000154251.A.b.b.a.b.b	ENSGT00940000153236.b.a.a.b.b.a.b	ENSGT00940000153236.b.b.b.a.a.a.a.a.a.a
Crab-eating macaque	MODERN SPECIES	10	ENSMFAG00000063532 #8	GPATCH1 (ENSMFAG00000034418) #9	RHPN2 (ENSMFAG00000043323) #10	FAAP24 (ENSMFAG00000054473) #11	CEP89 (ENSMFAG00000001684) #12	SLC7A9 (ENSMFAG00000002286) #13	TDRD12 (ENSMFAG00000044756) #14	ENSMFAG00000059021	NUDT19 (ENSMFAG00000042477) #15	ANKRD27 (ENSMFAG00000030329) #17	ENSMFAG00000051717	PDCD5 (ENSMFAG00000044379) #18	DPY19L3 (ENSMFAG00000043628) #19	ZNF507 (ENSMFAG00000031054) #20	ENSMFAG00000064547	TSHZ3 (ENSMFAG00000033604) #22	ENSMFAG00000058928	ZNF536 (ENSMFAG00000042864) #23	URI1 (ENSMFAG00000044813) #24	CCNE1 (ENSMFAG00000041278) #25	C19orf12 (ENSMFAG00000037046) #26	ENSMFAG00000056289	POP4 (ENSMFAG00000029606) #28	VSTM2B (ENSMFAG00000048636)	ENSMFAG00000060436 #29	ENSMFAG00000056393	ENSMFAG00000053270	ENSMFAG00000039986	ENSMFAG00000039830	ZNF254 (ENSMFAG00000003947)	ENSMFAG00000065576
Rhesus	MODERN SPECIES	10	LRP3 (ENSMMUG00000022872) #7	ENSMMUG00000064983	GPATCH1 (ENSMMUG00000011790) #9	RHPN2 (ENSMMUG00000028798) #10	FAAP24 (ENSMMUG00000017939) #11	CEP89 (ENSMMUG00000018351) #12	SLC7A9 (ENSMMUG00000028800) #13	TDRD12 (ENSMMUG00000015608)	RGS9BP (ENSMMUG00000046695) #16	ENSMMUG00000062732	ANKRD27 (ENSMMUG00000008041) #17	PDCD5 (ENSMMUG00000052666) #18	DPY19L3 (ENSMMUG00000010842) #19	ZNF507 (ENSMMUG00000010840) #20	ENSMMUG00000060263	TSHZ3 (ENSMMUG00000014028) #22	ZNF536 (ENSMMUG00000063586) #23	ENSMMUG00000058273	URI1 (ENSMMUG00000018441) #24	CCNE1 (ENSMMUG00000020668) #25	C19H19orf12 (ENSMMUG00000021690) #26	PLEKHF1 (ENSMMUG00000011373) #27	POP4 (ENSMMUG00000017424) #28	VSTM2B (ENSMMUG00000007392)	ENSMMUG00000008417 #29	ENSMMUG00000012013	ENSMMUG00000040891	ENSMMUG00000053639	ZNF254 (ENSMMUG00000052284)	ENSMMUG00000065175	ENSMMUG00000061458
Cercopithecinae_b	ANCESTRAL SPECIES	24	ENSGT00940000156469.h	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29
Olive baboon	MODERN SPECIES	12	SLC7A10 (ENSPANG00000005447)	LRP3 (ENSPANG00000018901) #7	WDR88 (ENSPANG00000010853) #8	GPATCH1 (ENSPANG00000012374) #9	RHPN2 (ENSPANG00000017034) #10	FAAP24 (ENSPANG00000024282) #11	CEP89 (ENSPANG00000003158) #12	SLC7A9 (ENSPANG00000001204) #13	TDRD12 (ENSPANG00000001203) #14	NUDT19 (ENSPANG00000011363) #15	RGS9BP (ENSPANG00000004020) #16	ANKRD27 (ENSPANG00000030136) #17	PDCD5 (ENSPANG00000013640) #18	DPY19L3 (ENSPANG00000010375) #19	ZNF507 (ENSPANG00000010840) #20	TSHZ3 (ENSPANG00000001076) #22	ZNF536 (ENSPANG00000016643) #23	URI1 (ENSPANG00000010974) #24	CCNE1 (ENSPANG00000017035) #25	ENSPANG00000007899 #26	PLEKHF1 (ENSPANG00000013107) #27	POP4 (ENSPANG00000008546) #28	VSTM2B (ENSPANG00000013391)	UQCRFS1 (ENSPANG00000024986) #29	ENSPANG00000048435	ENSPANG00000017544	ENSPANG00000026433	ENSPANG00000044512	ENSPANG00000034815	ZNF681 (ENSPANG00000037775)	ENSPANG00000018392
Cercopithecinae_d	ANCESTRAL SPECIES	26	ENSGT00940000156469.h	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29
Sooty mangabey	MODERN SPECIES	535	SLC7A10 (ENSCATG00000030571)	LRP3 (ENSCATG00000033824) #7	WDR88 (ENSCATG00000037627) #8	GPATCH1 (ENSCATG00000043637) #9	RHPN2 (ENSCATG00000028263) #10	FAAP24 (ENSCATG00000037414) #11	CEP89 (ENSCATG00000032749) #12	SLC7A9 (ENSCATG00000032830) #13	TDRD12 (ENSCATG00000038627) #14	NUDT19 (ENSCATG00000034824) #15	RGS9BP (ENSCATG00000000718) #16	ANKRD27 (ENSCATG00000039085) #17	PDCD5 (ENSCATG00000032551) #18	DPY19L3 (ENSCATG00000040765) #19	ZNF507 (ENSCATG00000032058) #20	TSHZ3 (ENSCATG00000027617) #22	ZNF536 (ENSCATG00000038060) #23	ENSCATG00000044280	URI1 (ENSCATG00000041548) #24	CCNE1 (ENSCATG00000036730) #25	C19orf12 (ENSCATG00000043372) #26	PLEKHF1 (ENSCATG00000017587) #27	POP4 (ENSCATG00000036022) #28	VSTM2B (ENSCATG00000041422)	UQCRFS1 (ENSCATG00000037427) #29
Drill	MODERN SPECIES	1167	ENSMLEG00000035146	SLC7A10 (ENSMLEG00000037857)	LRP3 (ENSMLEG00000042731) #7	WDR88 (ENSMLEG00000040613) #8	GPATCH1 (ENSMLEG00000043840) #9	RHPN2 (ENSMLEG00000031393) #10	FAAP24 (ENSMLEG00000034497) #11	CEP89 (ENSMLEG00000042877) #12	SLC7A9 (ENSMLEG00000034139) #13	TDRD12 (ENSMLEG00000042036) #14	ANKRD27 (ENSMLEG00000035681) #17	PDCD5 (ENSMLEG00000034452) #18	DPY19L3 (ENSMLEG00000041227) #19	ZNF507 (ENSMLEG00000043374) #20	ENSMLEG00000034458	TSHZ3 (ENSMLEG00000001629) #22	ZNF536 (ENSMLEG00000040359) #23	ENSMLEG00000042025	URI1 (ENSMLEG00000042881) #24	CCNE1 (ENSMLEG00000039590) #25	C19orf12 (ENSMLEG00000037130) #26	PLEKHF1 (ENSMLEG00000019239) #27	POP4 (ENSMLEG00000043454) #28	VSTM2B (ENSMLEG00000037367)	UQCRFS1 (ENSMLEG00000037838) #29
Vervet Monkey	MODERN SPECIES	25	LRP3 (ENSCSAG00000004689) #7	WDR88 (ENSCSAG00000004701) #8	GPATCH1 (ENSCSAG00000004743) #9	RHPN2 (ENSCSAG00000004761) #10	FAAP24 (ENSCSAG00000004765) #11	CEP89 (ENSCSAG00000004771) #12	SLC7A9 (ENSCSAG00000004775) #13	TDRD12 (ENSCSAG00000004794) #14	NUDT19 (ENSCSAG00000004800) #15	RGS9BP (ENSCSAG00000018513) #16	ANKRD27 (ENSCSAG00000004811) #17	PDCD5 (ENSCSAG00000004815) #18	DPY19L3 (ENSCSAG00000004818) #19	ZNF507 (ENSCSAG00000004822) #20	ENSCSAG00000004823	TSHZ3 (ENSCSAG00000018510) #22	ZNF536 (ENSCSAG00000004832) #23	URI1 (ENSCSAG00000004838) #24	CCNE1 (ENSCSAG00000004850) #25	C19orf12 (ENSCSAG00000004862) #26	PLEKHF1 (ENSCSAG00000018508) #27	POP4 (ENSCSAG00000004868) #28	VSTM2B (ENSCSAG00000004872)	UQCRFS1 (ENSCSAG00000004876) #29	ENSCSAG00000004890	ENSCSAG00000004895	ENSCSAG00000004898	ZNF726 (ENSCSAG00000004902)	ZNF681 (ENSCSAG00000004903)	ENSCSAG00000004906	ENSCSAG00000018506
Rhinopithecus	ANCESTRAL SPECIES	461														ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362.g #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014.i #29
Black snub-nosed monkey	MODERN SPECIES	455														DPY19L3 (ENSRBIG00000030615) #19	ZNF507 (ENSRBIG00000034646) #20	TSHZ3 (ENSRBIG00000026412) #22	ZNF536 (ENSRBIG00000039506) #23	ENSRBIG00000039664	ENSRBIG00000024225 #24	CCNE1 (ENSRBIG00000032298) #25	C19orf12 (ENSRBIG00000039475) #26	PLEKHF1 (ENSRBIG00000015740) #27	POP4 (ENSRBIG00000044769) #28	VSTM2B (ENSRBIG00000043416)	ENSRBIG00000036646 #29	ENSRBIG00000011549 #29	ENSRBIG00000034078	ENSRBIG00000001068
Golden snub-nosed monkey	MODERN SPECIES	3020														DPY19L3 (ENSRROG00000030373) #19	ZNF507 (ENSRROG00000033058) #20	TSHZ3 (ENSRROG00000030098) #22	ZNF536 (ENSRROG00000029672) #23	ENSRROG00000033869 #24	ENSRROG00000004401	CCNE1 (ENSRROG00000032241) #25	C19orf12 (ENSRROG00000036081) #26	PLEKHF1 (ENSRROG00000024857) #27	POP4 (ENSRROG00000028903) #28	VSTM2B (ENSRROG00000039045)	ENSRROG00000045520 #29
Platyrrhini	ANCESTRAL SPECIES	25	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00940000155097.kb	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077.hb #26	ENSGT00940000160728 #27	ENSGT00390000010067.c #28	ENSGT00940000161356	ENSGT00390000001014.n #29	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00950000182755.b.a.a.b.a.b.a.a.g.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643
Cebidae	ANCESTRAL SPECIES	8	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077.hb #26	ENSGT00940000160728 #27	ENSGT00390000010067.c #28	ENSGT00940000161356	ENSGT00390000001014.n #29	ENSGT00940000154251.A.a.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00950000182755.b.a.a.b.a.b.a.a.g.a	ENSGT00550000075064	ENSGT00950000183110.a	ENSGT01050000244941.B.c	ENSGT00940000162643
Cebidae_a	ANCESTRAL SPECIES	35	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00760000120431	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077.hb #26	ENSGT00940000160728 #27	ENSGT00390000010067.c #28	ENSGT00940000161356	ENSGT00390000001014.n #29
Bolivian squirrel monkey	MODERN SPECIES	134	CEBPG (ENSSBOG00000019291)	SLC7A10 (ENSSBOG00000027542)	LRP3 (ENSSBOG00000035415) #7	WDR88 (ENSSBOG00000025893) #8	GPATCH1 (ENSSBOG00000034650) #9	ENSSBOG00000015947	RHPN2 (ENSSBOG00000019588) #10	ENSSBOG00000032597 #11	CEP89 (ENSSBOG00000020185) #12	SLC7A9 (ENSSBOG00000026844) #13	TDRD12 (ENSSBOG00000034916) #14	ANKRD27 (ENSSBOG00000003371) #17	ENSSBOG00000031965 #18	DPY19L3 (ENSSBOG00000016884) #19	ZNF507 (ENSSBOG00000029395) #20	TSHZ3 (ENSSBOG00000026781) #22	ZNF536 (ENSSBOG00000030032) #23	URI1 (ENSSBOG00000026899) #24	CCNE1 (ENSSBOG00000028300) #25	ENSSBOG00000025647 #26	PLEKHF1 (ENSSBOG00000020039) #27	POP4 (ENSSBOG00000032445) #28	VSTM2B (ENSSBOG00000000764)	UQCRFS1 (ENSSBOG00000031980) #29
Capuchin	MODERN SPECIES	261	ZNHIT6 (ENSCCAG00000035034)	COL24A1 (ENSCCAG00000026567)	ODF2L (ENSCCAG00000036639)	CLCA2 (ENSCCAG00000022983)	CLCA1 (ENSCCAG00000032498)	CLCA4 (ENSCCAG00000027130)	ENSCCAG00000035676	SH3GLB1 (ENSCCAG00000029842)	ENSCCAG00000000976	ENSCCAG00000031456	SELENOF (ENSCCAG00000033446)	HS2ST1 (ENSCCAG00000026104)	ENSCCAG00000035343	ZNF507 (ENSCCAG00000032775) #20	ENSCCAG00000029568	TSHZ3 (ENSCCAG00000028090) #22	ZNF536 (ENSCCAG00000030471) #23	URI1 (ENSCCAG00000019670) #24	CCNE1 (ENSCCAG00000020086) #25	ENSCCAG00000024988 #26	PLEKHF1 (ENSCCAG00000019193) #27	ENSCCAG00000020285 #28	VSTM2B (ENSCCAG00000028420)	UQCRFS1 (ENSCCAG00000026746) #29
Marmoset	MODERN SPECIES	14	SLC7A10 (ENSCJAG00000000642)	LRP3 (ENSCJAG00000000662) #7	WDR88 (ENSCJAG00000000669) #8	GPATCH1 (ENSCJAG00000000684) #9	RHPN2 (ENSCJAG00000000708) #10	FAAP24 (ENSCJAG00000048468) #11	CEP89 (ENSCJAG00000000731) #12	SLC7A9 (ENSCJAG00000000755) #13	TDRD12 (ENSCJAG00000000763) #14	NUDT19 (ENSCJAG00000018441) #15	RGS9BP (ENSCJAG00000075946) #16	ANKRD27 (ENSCJAG00000018416) #17	ENSCJAG00000018410 #18	DPY19L3 (ENSCJAG00000018385) #19	ZNF507 (ENSCJAG00000018378) #20	TSHZ3 (ENSCJAG00000018374) #22	ZNF536 (ENSCJAG00000018365) #23	URI1 (ENSCJAG00000001823) #24	CCNE1 (ENSCJAG00000001857) #25	C19orf12 (ENSCJAG00000086068) #26	PLEKHF1 (ENSCJAG00000001871) #27	POP4 (ENSCJAG00000046750) #28	VSTM2B (ENSCJAG00000001884)	ENSCJAG00000001887 #29	ENSCJAG00000085320	ENSCJAG00000011613	ENSCJAG00000072387	ENSCJAG00000072073	ZNF254 (ENSCJAG00000015228)	ENSCJAG00000082182	ZNF681 (ENSCJAG00000011995)
Mas night monkey	MODERN SPECIES	1081	SLC7A10 (ENSANAG00000021682)	LRP3 (ENSANAG00000027962) #7	WDR88 (ENSANAG00000032336) #8	GPATCH1 (ENSANAG00000027002) #9	RHPN2 (ENSANAG00000035594) #10	ENSANAG00000025099 #11	CEP89 (ENSANAG00000020648) #12	SLC7A9 (ENSANAG00000023617) #13	TDRD12 (ENSANAG00000023166) #14	NUDT19 (ENSANAG00000035514) #15	RGS9BP (ENSANAG00000034601) #16	ANKRD27 (ENSANAG00000035787) #17	ENSANAG00000030236 #18	DPY19L3 (ENSANAG00000019965) #19	ZNF507 (ENSANAG00000022070) #20	TSHZ3 (ENSANAG00000003355) #22	ZNF536 (ENSANAG00000022858) #23	ENSANAG00000022926	URI1 (ENSANAG00000030437) #24	ENSANAG00000020114 #25	ENSANAG00000020400 #26	PLEKHF1 (ENSANAG00000031611) #27	POP4 (ENSANAG00000020295) #28	VSTM2B (ENSANAG00000011934)	ENSANAG00000026070 #29	ENSANAG00000024673	ENSANAG00000021197	ENSANAG00000019793	ENSANAG00000029579
Tarsier	MODERN SPECIES	1025																TSHZ3 (ENSTSYG00000005762) #22
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36
Glires	ANCESTRAL SPECIES	6	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36
Lagomorpha	ANCESTRAL SPECIES	121	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29
Pika	MODERN SPECIES	663																TSHZ3 (ENSOPRG00000010680) #22
Rabbit	MODERN SPECIES	455									ENSOCUG00000013666	NUDT19 (ENSOCUG00000032610) #15	RGS9BP (ENSOCUG00000001135) #16	ANKRD27 (ENSOCUG00000013225) #17	PDCD5 (ENSOCUG00000013220) #18	DPY19L3 (ENSOCUG00000013196) #19	ZNF507 (ENSOCUG00000014069) #20	TSHZ3 (ENSOCUG00000015902) #22	ENSOCUG00000024019	ZNF536 (ENSOCUG00000022631) #23	URI1 (ENSOCUG00000015063) #24	ENSOCUG00000009143 #25	C19orf12 (ENSOCUG00000002865) #26	POP4 (ENSOCUG00000015974) #28	VSTM2B (ENSOCUG00000023884)	ENSOCUG00000029273 #29
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT00940000160297	ENSGT00390000012508	ENSGT00930000151055	ENSGT00940000162407	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085.nb #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT01050000244808.D.fb.b.a.a.a.b	ENSGT01050000244808.D.fb.b.a.a.a.a	ENSGT01050000244808.D.fb.b.b.b	ENSGT01050000244808.D.fb.b.a.b	ENSGT00940000161974	ENSGT01050000244808.D.fb.b.b.a	ENSGT00940000155795
Hystricomorpha_a	ANCESTRAL SPECIES	11	ENSGT00940000160297	ENSGT00390000012508	ENSGT00930000151055	ENSGT00940000162407	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085.nb #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT01050000244808.D.fb.b.a.a.a.b	ENSGT01050000244808.D.fb.b.b.b	ENSGT01050000244808.D.fb.b.a.b	ENSGT00940000161974	ENSGT01050000244808.D.fb.b.b.a	ENSGT00940000155795	ENSGT01100000263475.d.a.h
Hystricomorpha_b	ANCESTRAL SPECIES	8	ENSGT00940000160297	ENSGT00390000012508	ENSGT00930000151055	ENSGT00940000162407	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085.nb #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT01050000244808.D.fb.b.a.a.a.b	ENSGT01050000244808.D.fb.b.b.b	ENSGT01050000244808.D.fb.b.a.b	ENSGT00940000161974	ENSGT01050000244808.D.fb.b.b.a	ENSGT00940000155795	ENSGT01100000263475.d.a.h
Long-tailed chinchilla	MODERN SPECIES	175	ATP4A (ENSCLAG00000013870)	HAUS5 (ENSCLAG00000011624)	RBM42 (ENSCLAG00000012865)	ETV2 (ENSCLAG00000011446)	RHPN2 (ENSCLAG00000011890) #10	FAAP24 (ENSCLAG00000013484) #11	ENSCLAG00000012488 #12	SLC7A9 (ENSCLAG00000012671) #13	TDRD12 (ENSCLAG00000012138) #14	NUDT19 (ENSCLAG00000015394) #15	RGS9BP (ENSCLAG00000017932) #16	ENSCLAG00000013353 #17	ENSCLAG00000014452 #18	DPY19L3 (ENSCLAG00000013128) #19	ZNF507 (ENSCLAG00000012690) #20	TSHZ3 (ENSCLAG00000012902) #22	ZNF536 (ENSCLAG00000014818) #23	URI1 (ENSCLAG00000014617) #24	CCNE1 (ENSCLAG00000016202) #25	C19orf12 (ENSCLAG00000015360) #26	PLEKHF1 (ENSCLAG00000012584) #27	POP4 (ENSCLAG00000013162) #28	VSTM2B (ENSCLAG00000016538)	UQCRFS1 (ENSCLAG00000011437) #29	FCRL5 (ENSCLAG00000011767)	FCRL3 (ENSCLAG00000012604)	FCRL1 (ENSCLAG00000014567)	CD5L (ENSCLAG00000015227)	ENSCLAG00000015395	KIRREL1 (ENSCLAG00000013814)	CD1D (ENSCLAG00000013027)
Degu	MODERN SPECIES	124	ENSODEG00000014537	ENSODEG00000020158	RHPN2 (ENSODEG00000014557) #10	FAAP24 (ENSODEG00000013890) #11	CEP89 (ENSODEG00000014225) #12	ENSODEG00000015062 #13	ENSODEG00000014355 #13	TDRD12 (ENSODEG00000014443) #14	NUDT19 (ENSODEG00000014770) #15	RGS9BP (ENSODEG00000020326) #16	ANKRD27 (ENSODEG00000013621) #17	ENSODEG00000013248 #18	DPY19L3 (ENSODEG00000013833) #19	ENSODEG00000013993 #20	ENSODEG00000014205	TSHZ3 (ENSODEG00000013840) #22	ZNF536 (ENSODEG00000013676) #23	URI1 (ENSODEG00000013616) #24	CCNE1 (ENSODEG00000014690) #25	ENSODEG00000020140	C19orf12 (ENSODEG00000013188) #26	ENSODEG00000020216	ENSODEG00000020166 #27	POP4 (ENSODEG00000013025) #28	VSTM2B (ENSODEG00000014510)	ENSODEG00000013453	UQCRFS1 (ENSODEG00000014654) #29	ENSODEG00000014952	ENSODEG00000020181	ENSODEG00000014146	CD5L (ENSODEG00000012955)
Guinea pig	MODERN SPECIES	56	RBM42 (ENSCPOG00000012365)	ENSCPOG00000013209	RHPN2 (ENSCPOG00000011968) #10	FAAP24 (ENSCPOG00000011965) #11	CEP89 (ENSCPOG00000001470) #12	ENSCPOG00000011225 #13	ENSCPOG00000030866 #13	ENSCPOG00000034999 #13	TDRD12 (ENSCPOG00000002876) #14	NUDT19 (ENSCPOG00000038218) #15	RGS9BP (ENSCPOG00000000730) #16	ANKRD27 (ENSCPOG00000000160) #17	PDCD5 (ENSCPOG00000040356) #18	DPY19L3 (ENSCPOG00000012483) #19	ENSCPOG00000012473 #20	TSHZ3 (ENSCPOG00000003591) #22	ZNF536 (ENSCPOG00000008744) #23	URI1 (ENSCPOG00000004105) #24	CCNE1 (ENSCPOG00000004836) #25	C19orf12 (ENSCPOG00000021635) #26	PLEKHF1 (ENSCPOG00000036685) #27	POP4 (ENSCPOG00000002992) #28	VSTM2B (ENSCPOG00000022127)	UQCRFS1 (ENSCPOG00000038582) #29	ENSCPOG00000020010	ENSCPOG00000005105	FCRL1 (ENSCPOG00000031919)	CD5L (ENSCPOG00000002911)	ENSCPOG00000001646	KIRREL1 (ENSCPOG00000004317)	ENSCPOG00000036278
Naked mole-rat female	MODERN SPECIES	20	RBM42 (ENSHGLG00000008418)	ENSHGLG00000006342	ENSHGLG00000005491 #10	FAAP24 (ENSHGLG00000047787) #11	CEP89 (ENSHGLG00000015749) #12	TDRD12 (ENSHGLG00000015608) #14	ENSHGLG00000049663	ENSHGLG00000032764	ENSHGLG00000033957	RGS9BP (ENSHGLG00000043502) #16	ENSHGLG00000000739 #17	PDCD5 (ENSHGLG00000015879) #18	DPY19L3 (ENSHGLG00000008160) #19	ZNF507 (ENSHGLG00000014642) #20	ENSHGLG00000048014	TSHZ3 (ENSHGLG00000015820) #22	ZNF536 (ENSHGLG00000013749) #23	URI1 (ENSHGLG00000009294) #24	CCNE1 (ENSHGLG00000005512) #25	C19orf12 (ENSHGLG00000013665) #26	PLEKHF1 (ENSHGLG00000015663) #27	POP4 (ENSHGLG00000043121) #28	VSTM2B (ENSHGLG00000010328)	ENSHGLG00000034008	UQCRFS1 (ENSHGLG00000046640) #29	ENSHGLG00000049204	ENSHGLG00000005888	FCRL1 (ENSHGLG00000005552)	CD5L (ENSHGLG00000006555)	ENSHGLG00000008016	ENSHGLG00000016598
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014.s #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36
Marmotini	ANCESTRAL SPECIES	7	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014.s #29
Marmotini_b	ANCESTRAL SPECIES	50	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014.s #29
Arctic ground squirrel	MODERN SPECIES	86	ENSUPAG00010010556	SLC7A10 (ENSUPAG00010010545)	LRP3 (ENSUPAG00010010534) #7	ENSUPAG00010010532	ENSUPAG00010010526 #8	GPATCH1 (ENSUPAG00010010496) #9	RHPN2 (ENSUPAG00010010489) #10	ENSUPAG00010010487 #11	CEP89 (ENSUPAG00010010410) #12	SLC7A9 (ENSUPAG00010010354) #13	TDRD12 (ENSUPAG00010010237) #14	RGS9BP (ENSUPAG00010010233) #16	ANKRD27 (ENSUPAG00010010181) #17	PDCD5 (ENSUPAG00010010174) #18	ZNF507 (ENSUPAG00010010113) #20	TSHZ3 (ENSUPAG00010010104) #22	ZNF536 (ENSUPAG00010010061) #23	URI1 (ENSUPAG00010010020) #24	CCNE1 (ENSUPAG00010010001) #25	C19orf12 (ENSUPAG00010009992) #26	PLEKHF1 (ENSUPAG00010009986) #27	POP4 (ENSUPAG00010009976) #28	VSTM2B (ENSUPAG00010009950)	UQCRFS1 (ENSUPAG00010009946) #29
Squirrel	MODERN SPECIES	170	CEBPG (ENSSTOG00000007596)	ENSSTOG00000027963	SLC7A10 (ENSSTOG00000009450)	LRP3 (ENSSTOG00000009443) #7	GPATCH1 (ENSSTOG00000003720) #9	RHPN2 (ENSSTOG00000002103) #10	CEP89 (ENSSTOG00000019373) #12	SLC7A9 (ENSSTOG00000013674) #13	TDRD12 (ENSSTOG00000013638) #14	ENSSTOG00000031724 #15	RGS9BP (ENSSTOG00000027616) #16	ANKRD27 (ENSSTOG00000013613) #17	PDCD5 (ENSSTOG00000025794) #18	DPY19L3 (ENSSTOG00000025908) #19	ZNF507 (ENSSTOG00000022278) #20	TSHZ3 (ENSSTOG00000024242) #22	ZNF536 (ENSSTOG00000013259) #23	URI1 (ENSSTOG00000009658) #24	CCNE1 (ENSSTOG00000009648) #25	C19orf12 (ENSSTOG00000020602) #26	PLEKHF1 (ENSSTOG00000023108) #27	POP4 (ENSSTOG00000011016) #28	VSTM2B (ENSSTOG00000020445)	ENSSTOG00000011909 #29
Alpin marmot	MODERN SPECIES	45	SLC7A10 (ENSMMMG00000006705)	LRP3 (ENSMMMG00000006727) #7	ENSMMMG00000006739 #8	GPATCH1 (ENSMMMG00000006748) #9	RHPN2 (ENSMMMG00000006785) #10	FAAP24 (ENSMMMG00000006814) #11	CEP89 (ENSMMMG00000006832) #12	SLC7A9 (ENSMMMG00000007036) #13	TDRD12 (ENSMMMG00000007074) #14	NUDT19 (ENSMMMG00000007175) #15	RGS9BP (ENSMMMG00000007176) #16	ANKRD27 (ENSMMMG00000007203) #17	PDCD5 (ENSMMMG00000007305) #18	DPY19L3 (ENSMMMG00000007308) #19	ZNF507 (ENSMMMG00000007322) #20	TSHZ3 (ENSMMMG00000007335) #22	ZNF536 (ENSMMMG00000007356) #23	URI1 (ENSMMMG00000007374) #24	CCNE1 (ENSMMMG00000007385) #25	C19orf12 (ENSMMMG00000007391) #26	PLEKHF1 (ENSMMMG00000007421) #27	POP4 (ENSMMMG00000007446) #28	VSTM2B (ENSMMMG00000007454)
Eurasian red squirrel	MODERN SPECIES	8	SLC7A10 (ENSSVLG00005022473)	LRP3 (ENSSVLG00005022405) #7	WDR88 (ENSSVLG00005022304) #8	GPATCH1 (ENSSVLG00005022166) #9	RHPN2 (ENSSVLG00005022031) #10	ENSSVLG00005021973 #11	CEP89 (ENSSVLG00005021928) #12	SLC7A9 (ENSSVLG00005021851) #13	TDRD12 (ENSSVLG00005021333) #14	NUDT19 (ENSSVLG00005021230) #15	RGS9BP (ENSSVLG00005021208) #16	ANKRD27 (ENSSVLG00005021121) #17	ENSSVLG00005020933 #18	DPY19L3 (ENSSVLG00005020851) #19	ZNF507 (ENSSVLG00005020811) #20	TSHZ3 (ENSSVLG00005020787) #22	ZNF536 (ENSSVLG00005020746) #23	URI1 (ENSSVLG00005020418) #24	CCNE1 (ENSSVLG00005020303) #25	ENSSVLG00005020245 #26	PLEKHF1 (ENSSVLG00005020227) #27	POP4 (ENSSVLG00005020169) #28	VSTM2B (ENSSVLG00005020091)	ENSSVLG00005020050 #29	ENSSVLG00005020000	ENSSVLG00005019946	ENSSVLG00005019913	ENSSVLG00005019872	SHCBP1 (ENSSVLG00005019832) #31	ENSSVLG00005019566	VPS35 (ENSSVLG00005019175) #32
Rodentia_B	ANCESTRAL SPECIES	20	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356
Kangaroo rat	MODERN SPECIES	411	Cebpg (ENSDORG00000027852)	Cebpa (ENSDORG00000027904)	Slc7a10 (ENSDORG00000002321)	Lrp3 (ENSDORG00000002320) #7	Gpatch1 (ENSDORG00000012546) #9	Rhpn2 (ENSDORG00000010758) #10	Cep89 (ENSDORG00000013896) #12	Slc7a9 (ENSDORG00000026148) #13	Tdrd12 (ENSDORG00000012134) #14	ENSDORG00000026153 #15	Rgs9bp (ENSDORG00000015832) #16	Ankrd27 (ENSDORG00000001832) #17	Pdcd5 (ENSDORG00000023317) #18	Dpy19l3 (ENSDORG00000009853) #19	ENSDORG00000013877 #20	ENSDORG00000026232 #22	Zfp536 (ENSDORG00000015237) #23	Uri1 (ENSDORG00000012581) #24	Ccne1 (ENSDORG00000007955) #25	Uqcrfs1 (ENSDORG00000004134) #29
Myomorpha	ANCESTRAL SPECIES	20	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356
Muroidea	ANCESTRAL SPECIES	18	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356
Muroidea_A	ANCESTRAL SPECIES	20	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00390000014208	ENSGT00940000161356	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000163087
Cricetidae	ANCESTRAL SPECIES	26	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00960000190924	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00390000014208	ENSGT00940000161356	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000163087
Cricetidae_B	ANCESTRAL SPECIES	25	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00960000190924	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00390000014208	ENSGT00940000161356	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000163087
Northern American deer mouse	MODERN SPECIES		Lrp3 (ENSPEMG00000000320) #7	ENSPEMG00000024856	Gpatch1 (ENSPEMG00000000636) #9	Rhpn2 (ENSPEMG00000020482) #10	Faap24 (ENSPEMG00000021083) #11	Cep89 (ENSPEMG00000020557) #12	Slc7a9 (ENSPEMG00000020346) #13	Tdrd12 (ENSPEMG00000009233) #14	ENSPEMG00000022578	Nudt19 (ENSPEMG00000020519) #15	Rgs9bp (ENSPEMG00000001852) #16	Ankrd27 (ENSPEMG00000020526) #17	Pdcd5 (ENSPEMG00000005766) #18	Dpy19l3 (ENSPEMG00000020636) #19	Zfp507 (ENSPEMG00000023579) #20	Tshz3 (ENSPEMG00000024219) #22	Zfp536 (ENSPEMG00000014198) #23	Uri1 (ENSPEMG00000021114) #24	Ccne1 (ENSPEMG00000020299) #25	1600014C10Rik (ENSPEMG00000030733) #26	ENSPEMG00000014034 #28	ENSPEMG00000026755	ENSPEMG00000019774	ENSPEMG00000026788	Vstm2b (ENSPEMG00000021557)	ENSPEMG00000024496	Zfp619 (ENSPEMG00000021007)	ENSPEMG00000024631	ENSPEMG00000027743	Plekhg2 (ENSPEMG00000017217)	Zfp36 (ENSPEMG00000007506)
Prairie vole	MODERN SPECIES	115	Slc7a10 (ENSMOCG00000020699)	Lrp3 (ENSMOCG00000007412) #7	Gpatch1 (ENSMOCG00000000174) #9	Rhpn2 (ENSMOCG00000015268) #10	Faap24 (ENSMOCG00000017357) #11	Cep89 (ENSMOCG00000000261) #12	Slc7a9 (ENSMOCG00000001789) #13	Tdrd12 (ENSMOCG00000002366) #14	Nudt19 (ENSMOCG00000017828) #15	Rgs9bp (ENSMOCG00000002309) #16	Ankrd27 (ENSMOCG00000013668) #17	ENSMOCG00000016930 #18	Dpy19l3 (ENSMOCG00000009571) #19	Zfp507 (ENSMOCG00000017422) #20	ENSMOCG00000015706	Tshz3 (ENSMOCG00000012794) #22	Zfp536 (ENSMOCG00000011684) #23	Uri1 (ENSMOCG00000018448) #24	Ccne1 (ENSMOCG00000008837) #25	1600014C10Rik (ENSMOCG00000007337) #26	Plekhf1 (ENSMOCG00000017276) #27
Cricetinae	ANCESTRAL SPECIES	39	ENSGT00940000162646	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28
Chinese hamster chok1gshd	MODERN SPECIES	282	Slc7a10 (ENSCGRG00001006085)	Lrp3 (ENSCGRG00001000089) #7	Gpatch1 (ENSCGRG00001016736) #9	Rhpn2 (ENSCGRG00001013772) #10	Faap24 (ENSCGRG00001012863) #11	ENSCGRG00001000081	Slc7a9 (ENSCGRG00001005745) #13	Tdrd12 (ENSCGRG00001021407) #14	Nudt19 (ENSCGRG00001017272) #15	Rgs9bp (ENSCGRG00001006642) #16	Ankrd27 (ENSCGRG00001018594) #17	ENSCGRG00001016049 #18	ENSCGRG00001014250	Dpy19l3 (ENSCGRG00001022217) #19	Zfp507 (ENSCGRG00001020787) #20	Tshz3 (ENSCGRG00001015566) #22	Zfp536 (ENSCGRG00001014547) #23	Uri1 (ENSCGRG00001019892) #24	Ccne1 (ENSCGRG00001015867) #25	1600014C10Rik (ENSCGRG00001014004) #26	Plekhf1 (ENSCGRG00001014179) #27	ENSCGRG00001012663	ENSCGRG00001013673
Murinae	ANCESTRAL SPECIES	19	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00390000014208.y.b
Mus	ANCESTRAL SPECIES		ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00390000014208.y.b	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000161356	ENSGT00390000014208.z	ENSGT00390000014208.y.a	ENSGT00940000153165.a.a.c.b.a.b.a	ENSGT00940000155965.t	ENSGT00940000163075	ENSGT01080000257333.A.a.b.a.b.b.a.a.d.a
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728.e #27	ENSGT00390000010067 #28	ENSGT00390000014208.y.b	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000161356	ENSGT00390000014208.z	ENSGT00390000014208.y.a	ENSGT00940000154469.a.a.b.b.b	ENSGT00950000183069.b.b.a.a.e.a.a.b.a.b.b	ENSGT00940000153165.a.a.c.b.a.b.a	ENSGT00940000155965.t
Mus_B	ANCESTRAL SPECIES		ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728.e #27	ENSGT00390000010067 #28	ENSGT00390000014208.y.b.a	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000161356	ENSGT00390000014208.z	ENSGT00390000014208.y.a.a.a	ENSGT00940000154469.a.a.b.b.b	ENSGT00950000183069.b.b.a.a.e.a.a.b.a.b.b	ENSGT00940000153165.a.a.c.b.a.b.a	ENSGT00940000155965.t
Mus_C	ANCESTRAL SPECIES	32	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728.e #27	ENSGT00390000010067 #28	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000161356	ENSGT00940000154469.a.a.b.b.b
spretus	MODERN SPECIES	16	Cebpg (MGP_SPRETEiJ_G0030677)	Cebpa (MGP_SPRETEiJ_G0030678)	Slc7a10 (MGP_SPRETEiJ_G0030679)	Lrp3 (MGP_SPRETEiJ_G0030680) #7	Gpatch1 (MGP_SPRETEiJ_G0030681) #9	Rhpn2 (MGP_SPRETEiJ_G0030682) #10	Faap24 (MGP_SPRETEiJ_G0030683) #11	Cep89 (MGP_SPRETEiJ_G0030684) #12	Slc7a9 (MGP_SPRETEiJ_G0030685) #13	Tdrd12 (MGP_SPRETEiJ_G0030686) #14	Rgs9bp (MGP_SPRETEiJ_G0030688) #16	Ankrd27 (MGP_SPRETEiJ_G0030689) #17	Pdcd5 (MGP_SPRETEiJ_G0030690) #18	Dpy19l3 (MGP_SPRETEiJ_G0030691) #19	Zfp507 (MGP_SPRETEiJ_G0030692) #20	Tshz3 (MGP_SPRETEiJ_G0030693) #22	Zfp536 (MGP_SPRETEiJ_G0030694) #23	Uri1 (MGP_SPRETEiJ_G0030695) #24	Ccne1 (MGP_SPRETEiJ_G0030696) #25	1600014C10Rik (MGP_SPRETEiJ_G0030697) #26	Plekhf1 (MGP_SPRETEiJ_G0030698) #27	Pop4 (MGP_SPRETEiJ_G0030699) #28	MGP_SPRETEiJ_G0030700	Zfp619 (MGP_SPRETEiJ_G0030701)	Vstm2b (MGP_SPRETEiJ_G0030702)	AI987944 (MGP_SPRETEiJ_G0030703)	AW146154 (MGP_SPRETEiJ_G0030704)	MGP_SPRETEiJ_G0030705	MGP_SPRETEiJ_G0030706	Zfp788 (MGP_SPRETEiJ_G0030707)	MGP_SPRETEiJ_G0030708
Steppe mouse	MODERN SPECIES	3056										ENSMSIG00000018080 #15	Rgs9bp (ENSMSIG00000018095) #16	Ankrd27 (ENSMSIG00000018102) #17	Pdcd5 (ENSMSIG00000018284) #18	Dpy19l3 (ENSMSIG00000018318) #19	Zfp507 (ENSMSIG00000018409) #20	Tshz3 (ENSMSIG00000018467) #22
Mouse	MODERN SPECIES	16	Slc7a10 (ENSMUSG00000030495)	Lrp3 (ENSMUSG00000001802) #7	Wdr88 (ENSMUSG00000118454) #8	Gpatch1 (ENSMUSG00000063808) #9	Rhpn2 (ENSMUSG00000030494) #10	Faap24 (ENSMUSG00000030493) #11	Cep89 (ENSMUSG00000023072) #12	Slc7a9 (ENSMUSG00000030492) #13	Tdrd12 (ENSMUSG00000030491) #14	Nudt19 (ENSMUSG00000034875) #15	Rgs9bp (ENSMUSG00000056043) #16	Ankrd27 (ENSMUSG00000034867) #17	Pdcd5 (ENSMUSG00000030417) #18	Dpy19l3 (ENSMUSG00000043671) #19	Zfp507 (ENSMUSG00000044452) #20	Tshz3 (ENSMUSG00000021217) #22	Zfp536 (ENSMUSG00000043456) #23	Uri1 (ENSMUSG00000030421) #24	Ccne1 (ENSMUSG00000002068) #25	1600014C10Rik (ENSMUSG00000054676) #26	Plekhf1 (ENSMUSG00000074170) #27	Pop4 (ENSMUSG00000030423) #28	Gm5591 (ENSMUSG00000060565)	Gm5114 (ENSMUSG00000053742)	Zfp619 (ENSMUSG00000068959)	Vstm2b (ENSMUSG00000039257)	4930433I11Rik (ENSMUSG00000091692)	Gm4884 (ENSMUSG00000048312)	Gm5592 (ENSMUSG00000072259)	AI987944 (ENSMUSG00000056383)	Vmn2r57 (ENSMUSG00000066537)
Ryukyu mouse	MODERN SPECIES	16	Cebpa (MGP_CAROLIEiJ_G0029579)	Slc7a10 (MGP_CAROLIEiJ_G0029580)	Lrp3 (MGP_CAROLIEiJ_G0029581) #7	Gpatch1 (MGP_CAROLIEiJ_G0029582) #9	Rhpn2 (MGP_CAROLIEiJ_G0029583) #10	Faap24 (MGP_CAROLIEiJ_G0029584) #11	Cep89 (MGP_CAROLIEiJ_G0029585) #12	Slc7a9 (MGP_CAROLIEiJ_G0029586) #13	Tdrd12 (MGP_CAROLIEiJ_G0029587) #14	Nudt19 (MGP_CAROLIEiJ_G0029588) #15	Rgs9bp (MGP_CAROLIEiJ_G0029589) #16	Ankrd27 (MGP_CAROLIEiJ_G0029590) #17	MGP_CAROLIEiJ_G0029591 #18	Dpy19l3 (MGP_CAROLIEiJ_G0029592) #19	Zfp507 (MGP_CAROLIEiJ_G0029593) #20	Tshz3 (MGP_CAROLIEiJ_G0029594) #22	Zfp536 (MGP_CAROLIEiJ_G0029595) #23	Uri1 (MGP_CAROLIEiJ_G0029596) #24	Ccne1 (MGP_CAROLIEiJ_G0029597) #25	MGP_CAROLIEiJ_G0029598 #26	Plekhf1 (MGP_CAROLIEiJ_G0029599) #27	Pop4 (MGP_CAROLIEiJ_G0029600) #28	Zfp619 (MGP_CAROLIEiJ_G0029602)	Vstm2b (MGP_CAROLIEiJ_G0029603)	AI987944 (MGP_CAROLIEiJ_G0029604)	MGP_CAROLIEiJ_G0029605	MGP_CAROLIEiJ_G0029606	Zfp788 (MGP_CAROLIEiJ_G0029608)	MGP_CAROLIEiJ_G0029610	MGP_CAROLIEiJ_G0029609	MGP_CAROLIEiJ_G0029611
Shrew mouse	MODERN SPECIES		Cebpa (MGP_PahariEiJ_G0012813)	Slc7a10 (MGP_PahariEiJ_G0012814)	Lrp3 (MGP_PahariEiJ_G0012815) #7	Gpatch1 (MGP_PahariEiJ_G0012816) #9	Rhpn2 (MGP_PahariEiJ_G0012817) #10	Faap24 (MGP_PahariEiJ_G0012818) #11	Cep89 (MGP_PahariEiJ_G0012819) #12	Slc7a9 (MGP_PahariEiJ_G0012820) #13	Tdrd12 (MGP_PahariEiJ_G0012821) #14	Nudt19 (MGP_PahariEiJ_G0012822) #15	Rgs9bp (MGP_PahariEiJ_G0012823) #16	Ankrd27 (MGP_PahariEiJ_G0012824) #17	MGP_PahariEiJ_G0012825 #18	Dpy19l3 (MGP_PahariEiJ_G0012826) #19	Zfp507 (MGP_PahariEiJ_G0012827) #20	Tshz3 (MGP_PahariEiJ_G0012828) #22	Zfp536 (MGP_PahariEiJ_G0012829) #23	Uri1 (MGP_PahariEiJ_G0012830) #24	Ccne1 (MGP_PahariEiJ_G0012831) #25	1600014C10Rik (MGP_PahariEiJ_G0012832) #26	Plekhf1 (MGP_PahariEiJ_G0012833) #27	MGP_PahariEiJ_G0012834	Vstm2b (MGP_PahariEiJ_G0012835)	MGP_PahariEiJ_G0012836	AI987944 (MGP_PahariEiJ_G0012838)	2610021A01Rik (MGP_PahariEiJ_G0012839)	MGP_PahariEiJ_G0012840	Zfp788 (MGP_PahariEiJ_G0012841)	MGP_PahariEiJ_G0012842	Siglecf (MGP_PahariEiJ_G0012843)	Siglecg (MGP_PahariEiJ_G0012844)
Rat	MODERN SPECIES		Wdr88 (ENSRNOG00000037393) #8	Gpatch1 (ENSRNOG00000011584) #9	Snrpg (ENSRNOG00000032232)	Rhpn2 (ENSRNOG00000011885) #10	Faap24 (ENSRNOG00000022393) #11	Cep89 (ENSRNOG00000012140) #12	Slc7a9 (ENSRNOG00000012344) #13	Tdrd12 (ENSRNOG00000012719) #14	AC136661.1 (ENSRNOG00000037380)	Nudt19 (ENSRNOG00000059386) #15	Rgs9bp (ENSRNOG00000012877) #16	Ankrd27 (ENSRNOG00000052814) #17	Pdcd5 (ENSRNOG00000068327) #18	Dpy19l3 (ENSRNOG00000021573) #19	Zfp507 (ENSRNOG00000013565) #20	Tshz3 (ENSRNOG00000013938) #22	RGD1562402 (ENSRNOG00000031859)	Zfp536 (ENSRNOG00000014163) #23	Uri1 (ENSRNOG00000014463) #24	Ccne1 (ENSRNOG00000014786) #25	LOC690000 (ENSRNOG00000014966) #26	Plekhf1 (ENSRNOG00000027724) #27	Pop4 (ENSRNOG00000027646) #28	Marf1-ps1 (ENSRNOG00000051237)	LOC690114 (ENSRNOG00000027370)	LOC365238 (ENSRNOG00000015168)	LOC108348090 (ENSRNOG00000067296)	Zfp939 (ENSRNOG00000064970)	Zfp619 (ENSRNOG00000066986)	LOC102548320 (ENSRNOG00000069276)	Cdc42se2 (ENSRNOG00000037364)
Upper Galilee mountains blind mole rat	MODERN SPECIES	458														Dpy19l3 (ENSNGAG00000010668) #19	Zfp507 (ENSNGAG00000010990) #20	Tshz3 (ENSNGAG00000011318) #22
Lesser Egyptian jerboa	MODERN SPECIES	73	Cebpg (ENSJJAG00000009499)	ENSJJAG00000014105	Slc7a10 (ENSJJAG00000006090)	Lrp3 (ENSJJAG00000017356) #7	Gpatch1 (ENSJJAG00000023765) #9	Rhpn2 (ENSJJAG00000001747) #10	ENSJJAG00000012680 #11	Cep89 (ENSJJAG00000024207) #12	Slc7a9 (ENSJJAG00000014613) #13	ENSJJAG00000018149 #14	Rgs9bp (ENSJJAG00000012886) #16	Ankrd27 (ENSJJAG00000016506) #17	ENSJJAG00000016867 #18	Dpy19l3 (ENSJJAG00000011397) #19	ENSJJAG00000014559 #20	ENSJJAG00000018135 #22	Zfp536 (ENSJJAG00000005397) #23	Uri1 (ENSJJAG00000017190) #24	Ccne1 (ENSJJAG00000013552) #25	1600014C10Rik (ENSJJAG00000015651) #26	Plekhf1 (ENSJJAG00000011982) #27	Pop4 (ENSJJAG00000013376) #28	Vstm2b (ENSJJAG00000022517)	Rnf6 (ENSJJAG00000023994)	Cdk8 (ENSJJAG00000009532)	Wasf3 (ENSJJAG00000018294)	Gpr12 (ENSJJAG00000012507)	Usp12 (ENSJJAG00000019341)	Rasl11a (ENSJJAG00000020910)	Gtf3a (ENSJJAG00000011501)	Mtif3 (ENSJJAG00000013006)
Atlantogenata	ANCESTRAL SPECIES	24			ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Afrotheria	ANCESTRAL SPECIES	44	ENSGT00940000160676	ENSGT00940000162646	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Afrotheria_a	ANCESTRAL SPECIES	43	ENSGT00940000160676	ENSGT00940000162646	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36	ENSGT00940000154688.b #37
Elephant	MODERN SPECIES	393	CEBPA (ENSLAFG00000030435)	LRP3 (ENSLAFG00000027575) #7	WDR88 (ENSLAFG00000013599) #8	GPATCH1 (ENSLAFG00000013589) #9	RHPN2 (ENSLAFG00000013586) #10	FAAP24 (ENSLAFG00000006401) #11	CEP89 (ENSLAFG00000006394) #12	SLC7A9 (ENSLAFG00000008707) #13	TDRD12 (ENSLAFG00000008698) #14	NUDT19 (ENSLAFG00000032048) #15	RGS9BP (ENSLAFG00000008696) #16	ANKRD27 (ENSLAFG00000013926) #17	PDCD5 (ENSLAFG00000013922) #18	DPY19L3 (ENSLAFG00000011171) #19	ZNF507 (ENSLAFG00000018078) #20	TSHZ3 (ENSLAFG00000000905) #22	ZNF536 (ENSLAFG00000017731) #23	URI1 (ENSLAFG00000014350) #24	CCNE1 (ENSLAFG00000011876) #25	C19orf12 (ENSLAFG00000021383) #26	PLEKHF1 (ENSLAFG00000030466) #27	POP4 (ENSLAFG00000000084) #28	VSTM2B (ENSLAFG00000011112)	UQCRFS1 (ENSLAFG00000002797) #29	ENSLAFG00000029634	SHCBP1 (ENSLAFG00000030123) #31	VPS35 (ENSLAFG00000001705) #32	ORC6 (ENSLAFG00000001707) #33	MYLK3 (ENSLAFG00000001709) #34	C16orf87 (ENSLAFG00000009006) #35	GPT2 (ENSLAFG00000016529) #36
Hyrax	MODERN SPECIES	1692																ENSPCAG00000011413 #22
Xenarthra	ANCESTRAL SPECIES	275			ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22
Armadillo	MODERN SPECIES	3335	WDR88 (ENSDNOG00000019863) #8	ENSDNOG00000042043	GPATCH1 (ENSDNOG00000005291) #9	RHPN2 (ENSDNOG00000014140) #10	ENSDNOG00000014134 #11	CEP89 (ENSDNOG00000045063) #12	SLC7A9 (ENSDNOG00000044029) #13	TDRD12 (ENSDNOG00000017244) #14	NUDT19 (ENSDNOG00000044256) #15	RGS9BP (ENSDNOG00000004034) #16	ANKRD27 (ENSDNOG00000004014) #17	PDCD5 (ENSDNOG00000004010) #18	ENSDNOG00000033818	DPY19L3 (ENSDNOG00000009405) #19	ZNF507 (ENSDNOG00000009394) #20	TSHZ3 (ENSDNOG00000013222) #22
Sloth	MODERN SPECIES	1892																ENSCHOG00000002113 #22
Marsupialia	ANCESTRAL SPECIES	18	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085.n #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36
Opossum	MODERN SPECIES		ENSMODG00000039982	RHPN2 (ENSMODG00000012240) #10	FAAP24 (ENSMODG00000012243) #11	CEP89 (ENSMODG00000012246) #12	ENSMODG00000050814	SLC7A9 (ENSMODG00000012256) #13	TDRD12 (ENSMODG00000012286) #14	ENSMODG00000012288 #15	ENSMODG00000038175	RGS9BP (ENSMODG00000023490) #16	ANKRD27 (ENSMODG00000012322) #17	ENSMODG00000012326 #18	DPY19L3 (ENSMODG00000012361) #19	ENSMODG00000028628	ZNF507 (ENSMODG00000012367) #20	TSHZ3 (ENSMODG00000012390) #22	ZNF536 (ENSMODG00000012653) #23	URI1 (ENSMODG00000012675) #24	ENSMODG00000012680 #25	C19orf12 (ENSMODG00000012696) #26	PLEKHF1 (ENSMODG00000023488) #27	POP4 (ENSMODG00000029406) #28	ENSMODG00000037821	ENSMODG00000012703	ENSMODG00000038837	UQCRFS1 (ENSMODG00000012709) #29	ENSMODG00000023487	SHCBP1 (ENSMODG00000012749) #31	ENSMODG00000042100	VPS35 (ENSMODG00000012784) #32	ORC6 (ENSMODG00000012795) #33
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085.n #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085.n #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00940000160021 #7	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021.e #17	ENSGT00390000011085.n #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36
Common wonbat	MODERN SPECIES	1024	ENSVURG00010011001 #9	ENSVURG00010011018 #10	ENSVURG00010011034 #11	ENSVURG00010011054 #12	ENSVURG00010011149	ENSVURG00010011153 #13	ENSVURG00010011177 #14	ENSVURG00010011228 #15	ENSVURG00010011234 #16	ENSVURG00010011246 #17	ENSVURG00010011291 #18	ENSVURG00010011334 #19	ENSVURG00010011340 #20	ENSVURG00010011374	ENSVURG00010011385	TSHZ3 (ENSVURG00010011394) #22	ZNF536 (ENSVURG00010011415) #23	URI1 (ENSVURG00010011452) #24	CCNE1 (ENSVURG00010011492) #25	C19orf12 (ENSVURG00010012490) #26	PLEKHF1 (ENSVURG00010012501) #27	POP4 (ENSVURG00010012509) #28	VSTM2B (ENSVURG00010012523)	UQCRFS1 (ENSVURG00010012533) #29	SHCBP1 (ENSVURG00010012550) #31	ENSVURG00010012592	VPS35 (ENSVURG00010012859) #32	ORC6 (ENSVURG00010012881) #33	C16orf87 (ENSVURG00010012890) #35	ENSVURG00010012900	GPT2 (ENSVURG00010012907) #36
koala	MODERN SPECIES	19	LRP3 (ENSPCIG00000009598) #7	ENSPCIG00000021005 #8	GPATCH1 (ENSPCIG00000021003) #9	RHPN2 (ENSPCIG00000020997) #10	FAAP24 (ENSPCIG00000021002) #11	ENSPCIG00000021000	SLC7A9 (ENSPCIG00000020995) #13	TDRD12 (ENSPCIG00000020993) #14	ENSPCIG00000020992 #15	RGS9BP (ENSPCIG00000020990) #16	ANKRD27 (ENSPCIG00000020984) #17	ENSPCIG00000020982 #18	DPY19L3 (ENSPCIG00000000890) #19	ZNF507 (ENSPCIG00000001104) #20	ENSPCIG00000011864	TSHZ3 (ENSPCIG00000014075) #22	ENSPCIG00000035300	ZNF536 (ENSPCIG00000017559) #23	URI1 (ENSPCIG00000017561) #24	ENSPCIG00000017562	ENSPCIG00000017564 #25	C19orf12 (ENSPCIG00000034142) #26	PLEKHF1 (ENSPCIG00000024734) #27	POP4 (ENSPCIG00000024738) #28	VSTM2B (ENSPCIG00000024740)	UQCRFS1 (ENSPCIG00000024743) #29	SHCBP1 (ENSPCIG00000015536) #31	ENSPCIG00000018612	VPS35 (ENSPCIG00000018597) #32	ORC6 (ENSPCIG00000018588) #33	MYLK3 (ENSPCIG00000018586) #34
Wallaby	MODERN SPECIES	2961																TSHZ3 (ENSMEUG00000008737) #22
Tasmanian devil	MODERN SPECIES	1	LRP3 (ENSSHAG00000015576) #7	ENSSHAG00000023131 #8	GPATCH1 (ENSSHAG00000016016) #9	ENSSHAG00000021461	RHPN2 (ENSSHAG00000016222) #10	FAAP24 (ENSSHAG00000016372) #11	CEP89 (ENSSHAG00000026537) #12	ENSSHAG00000026384	SLC7A9 (ENSSHAG00000000814) #13	TDRD12 (ENSSHAG00000022785) #14	ANKRD27 (ENSSHAG00000005784) #17	RGS9BP (ENSSHAG00000005364) #16	PDCD5 (ENSSHAG00000029718) #18	DPY19L3 (ENSSHAG00000009113) #19	ZNF507 (ENSSHAG00000010139) #20	TSHZ3 (ENSSHAG00000006124) #22	ZNF536 (ENSSHAG00000013353) #23	URI1 (ENSSHAG00000015726) #24	C19orf12 (ENSSHAG00000028773) #26	ENSSHAG00000016239 #25	ENSSHAG00000022898 #27	POP4 (ENSSHAG00000028432) #28	ENSSHAG00000024076	ENSSHAG00000017804 #29	ENSSHAG00000024152	ENSSHAG00000018876 #31	ENSSHAG00000002563	ENSSHAG00000003156 #32	ORC6 (ENSSHAG00000004207) #33	MYLK3 (ENSSHAG00000004502) #34	C16orf87 (ENSSHAG00000029891) #35
Platypus	MODERN SPECIES	2	LRP3 (ENSOANG00000012736) #7	ENSOANG00000050528 #8	GPATCH1 (ENSOANG00000012732) #9	RHPN2 (ENSOANG00000012731) #10	FAAP24 (ENSOANG00000038390) #11	ENSOANG00000012729	CEP89 (ENSOANG00000012728) #12	SLC7A9 (ENSOANG00000012726) #13	TDRD12 (ENSOANG00000029442) #14	ENSOANG00000012725 #15	ENSOANG00000049435	ANKRD27 (ENSOANG00000012724) #17	PDCD5 (ENSOANG00000040196) #18	ENSOANG00000037295	ZNF507 (ENSOANG00000002786) #20	TSHZ3 (ENSOANG00000002785) #22	ZNF536 (ENSOANG00000002991) #23	ENSOANG00000002990 #24	CCNE1 (ENSOANG00000014148) #25	ENSOANG00000000737	C19orf12 (ENSOANG00000044469) #26	PLEKHF1 (ENSOANG00000002290) #27	POP4 (ENSOANG00000020512) #28	ENSOANG00000051058	UQCRFS1 (ENSOANG00000002291) #29	SHCBP1 (ENSOANG00000005202) #31	VPS35 (ENSOANG00000002249) #32	ENSOANG00000003660 #33	C16orf87 (ENSOANG00000002163) #35	GPT2 (ENSOANG00000038755) #36	ENSOANG00000040349
Sauria	ANCESTRAL SPECIES	14	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Lepidosauria	ANCESTRAL SPECIES	49	ENSGT00940000160021 #7	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077.jb #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Episquamata	ANCESTRAL SPECIES	11	ENSGT00940000160021 #7	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077.jb.a #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Toxicofera	ANCESTRAL SPECIES	16	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077.jb.a #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Elapidae	ANCESTRAL SPECIES	17	ENSGT00940000160021 #7	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847.b #14	ENSGT00420000029847.a #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077.jb.a #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Elapidae_a	ANCESTRAL SPECIES	28	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847.a #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077.jb.a #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36
Acanthophiinae	ANCESTRAL SPECIES	26	ENSGT00940000156469	ENSGT00940000160021 #7	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847.a #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000009077.jb.a #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35	ENSGT00940000159061 #36
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	120	ENSPTXG00000008214	ENSPTXG00000008216 #7	ENSPTXG00000008220 #9	ENSPTXG00000008223 #10	ENSPTXG00000008224 #11	ENSPTXG00000008225 #12	ENSPTXG00000008226	ENSPTXG00000008227 #13	ENSPTXG00000008230 #14	ENSPTXG00000008238 #15	ENSPTXG00000008239 #16	ENSPTXG00000008241 #17	ENSPTXG00000008242 #18	ENSPTXG00000008243 #19	ENSPTXG00000008279 #20	ENSPTXG00000008280 #22
Eastern brown snake	MODERN SPECIES	119	ENSPTXG00000018218 #7	ENSPTXG00000018220 #9	ENSPTXG00000018221 #10	ENSPTXG00000018225 #11	ENSPTXG00000018226	ENSPTXG00000018227 #12	ENSPTXG00000018228	ENSPTXG00000018229 #13	ENSPTXG00000018230 #14	ENSPTXG00000018231 #15	ENSPTXG00000018232 #16	ENSPTXG00000018233 #17	ENSPTXG00000007825 #18	ENSPTXG00000007826 #19	ENSPTXG00000007827 #20	ENSPTXG00000007828 #22
Mainland tiger snake	MODERN SPECIES	79	EXOSC6 (ENSNSUG00000012895)	SLC7A10 (ENSNSUG00000012892)	LRP3 (ENSNSUG00000012762) #7	GPATCH1 (ENSNSUG00000012761) #9	RHPN2 (ENSNSUG00000012760) #10	FAAP24 (ENSNSUG00000012759) #11	ENSNSUG00000012758	SLC7A9 (ENSNSUG00000012757) #13	TDRD12 (ENSNSUG00000012756) #14	NUDT19 (ENSNSUG00000012755) #15	RGS9BP (ENSNSUG00000012754) #16	ANKRD27 (ENSNSUG00000012753) #17	PDCD5 (ENSNSUG00000012752) #18	DPY19L3 (ENSNSUG00000012720) #19	ZNF507 (ENSNSUG00000012719) #20	TSHZ3 (ENSNSUG00000012718) #22	ZNF536 (ENSNSUG00000012717) #23	URI1 (ENSNSUG00000012716) #24	CCNE1 (ENSNSUG00000012715) #25	ENSNSUG00000012714 #26	PLEKHF1 (ENSNSUG00000012713) #27	POP4 (ENSNSUG00000012712) #28	VSTM2B (ENSNSUG00000012711)	UQCRFS1 (ENSNSUG00000012710) #29	SHCBP1 (ENSNSUG00000012709) #31	ENSNSUG00000012694	VPS35 (ENSNSUG00000012693) #32	ORC6 (ENSNSUG00000012692) #33	MYLK3 (ENSNSUG00000012691) #34	C16orf87 (ENSNSUG00000012690) #35	GPT2 (ENSNSUG00000012561) #36
Blue-lipped sea krait	MODERN SPECIES	6914																TSHZ3 (ENSLLTG00000016658) #22
Indian cobra	MODERN SPECIES	12	SLC7A10 (ENSNNAG00000016186)	LRP3 (ENSNNAG00000016228) #7	GPATCH1 (ENSNNAG00000016248) #9	FAAP24 (ENSNNAG00000016259) #11	RHPN2 (ENSNNAG00000016305) #10	CEP89 (ENSNNAG00000016646) #12	ENSNNAG00000016664	SLC7A9 (ENSNNAG00000016683) #13	TDRD12 (ENSNNAG00000016697) #14	NUDT19 (ENSNNAG00000016812) #15	RGS9BP (ENSNNAG00000016817) #16	ANKRD27 (ENSNNAG00000016829) #17	PDCD5 (ENSNNAG00000010137) #18	DPY19L3 (ENSNNAG00000010209) #19	ZNF507 (ENSNNAG00000011046) #20	TSHZ3 (ENSNNAG00000011079) #22	ZNF536 (ENSNNAG00000011087) #23	URI1 (ENSNNAG00000011117) #24	CCNE1 (ENSNNAG00000011156) #25	ENSNNAG00000011184	C19orf12 (ENSNNAG00000011209) #26	PLEKHF1 (ENSNNAG00000011243) #27	POP4 (ENSNNAG00000011255) #28	VSTM2B (ENSNNAG00000011284)	UQCRFS1 (ENSNNAG00000011334) #29	SHCBP1 (ENSNNAG00000011347) #31	ENSNNAG00000011400	VPS35 (ENSNNAG00000011604) #32	ORC6 (ENSNNAG00000011683) #33	MYLK3 (ENSNNAG00000011712) #34	GPT2 (ENSNNAG00000011858) #36
Lizard	MODERN SPECIES	913																TSHZ3 (ENSACAG00000037758) #22	ENSACAG00000043032	ZNF536 (ENSACAG00000012257) #23	ENSACAG00000038297	ENSACAG00000042574	URI1 (ENSACAG00000012186) #24	CCNE1 (ENSACAG00000014781) #25	ENSACAG00000029452	ENSACAG00000039719 #26
Laterata	ANCESTRAL SPECIES	28	ENSGT00940000160021 #7	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077.jb.a #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Common wall lizard	MODERN SPECIES	16	RHPN2 (ENSPMRG00000020259) #10	FAAP24 (ENSPMRG00000020254) #11	ENSPMRG00000020249	CEP89 (ENSPMRG00000020236) #12	ENSPMRG00000020207 #13	ENSPMRG00000020010 #13	TDRD12 (ENSPMRG00000019898) #14	NUDT19 (ENSPMRG00000019876) #15	RGS9BP (ENSPMRG00000019872) #16	ANKRD27 (ENSPMRG00000019851) #17	PDCD5 (ENSPMRG00000019845) #18	ENSPMRG00000019807	DPY19L3 (ENSPMRG00000019792) #19	ZNF507 (ENSPMRG00000019776) #20	ENSPMRG00000019771	TSHZ3 (ENSPMRG00000019765) #22	ZNF536 (ENSPMRG00000019756) #23	URI1 (ENSPMRG00000019743) #24	CCNE1 (ENSPMRG00000019724) #25	ENSPMRG00000019707	ENSPMRG00000019704 #26	ENSPMRG00000019700 #26	ENSPMRG00000019691 #26	PLEKHF1 (ENSPMRG00000019684) #27	POP4 (ENSPMRG00000019675) #28	VSTM2B (ENSPMRG00000019668)	ENSPMRG00000019664	UQCRFS1 (ENSPMRG00000019661) #29	SHCBP1 (ENSPMRG00000019652) #31	ENSPMRG00000019644	VPS35 (ENSPMRG00000019631) #32
Argentine black and white tegu	MODERN SPECIES	86	ENSSMRG00000017112	ENSSMRG00000017115	ENSSMRG00000017118	FAAP24 (ENSSMRG00000017123) #11	CEP89 (ENSSMRG00000017126) #12	ENSSMRG00000017132	SLC7A9 (ENSSMRG00000017135) #13	TDRD12 (ENSSMRG00000017139) #14	NUDT19 (ENSSMRG00000017151) #15	RGS9BP (ENSSMRG00000017152) #16	ANKRD27 (ENSSMRG00000017154) #17	PDCD5 (ENSSMRG00000017156) #18	ENSSMRG00000017159	DPY19L3 (ENSSMRG00000017164) #19	ZNF507 (ENSSMRG00000017166) #20	TSHZ3 (ENSSMRG00000017169) #22	ZNF536 (ENSSMRG00000017174) #23	URI1 (ENSSMRG00000017182) #24	CCNE1 (ENSSMRG00000017186) #25	ENSSMRG00000017191	C19orf12 (ENSSMRG00000017192) #26	PLEKHF1 (ENSSMRG00000017205) #27	POP4 (ENSSMRG00000017206) #28	VSTM2B (ENSSMRG00000017209)	UQCRFS1 (ENSSMRG00000017211) #29	SHCBP1 (ENSSMRG00000017212) #31
tuatara	MODERN SPECIES	1861																TSHZ3 (ENSSPUG00000018669) #22
Archelosauria	ANCESTRAL SPECIES	16	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Archosauria	ANCESTRAL SPECIES	14	ENSGT00940000162291.f #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Aves	ANCESTRAL SPECIES	22	ENSGT00940000162291.f #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Neognathae	ANCESTRAL SPECIES	13	ENSGT00940000162291.f #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Neognathae_b	ANCESTRAL SPECIES	15	ENSGT00940000160021 #7	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Passeriformes	ANCESTRAL SPECIES	13	ENSGT00940000156370 #13	ENSGT00940000153691.a.b	ENSGT00940000157553	ENSGT00940000165319	ENSGT00940000159631	ENSGT00940000159184	ENSGT00950000183186.B.a	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Passeriformes_d	ANCESTRAL SPECIES	13	ENSGT00940000153691.a.b	ENSGT00940000157553	ENSGT00940000165319	ENSGT00940000163228.d	ENSGT00940000159631	ENSGT00940000159184	ENSGT00950000183186.B.a	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Flycatcher	MODERN SPECIES	2	ENSFALG00000000289	ADAMTS18 (ENSFALG00000000306)	ENSFALG00000000308	ENSFALG00000024155	ENSFALG00000027861	VAT1L (ENSFALG00000000264)	CLEC3A (ENSFALG00000000261)	TDRD12 (ENSFALG00000000259) #14	ENSFALG00000023906 #15	RGS9BP (ENSFALG00000014197) #16	ANKRD27 (ENSFALG00000000253) #17	PDCD5 (ENSFALG00000000250) #18	ENSFALG00000000241	DPY19L3 (ENSFALG00000000238) #19	ZNF507 (ENSFALG00000000237) #20	TSHZ3 (ENSFALG00000014186) #22	ZNF536 (ENSFALG00000000233) #23	URI1 (ENSFALG00000000228) #24	CCNE1 (ENSFALG00000000223) #25	ENSFALG00000000218	C19orf12 (ENSFALG00000000215) #26	PLEKHF1 (ENSFALG00000014180) #27	POP4 (ENSFALG00000000206) #28	UQCRFS1 (ENSFALG00000014175) #29	ENSFALG00000028734	ENSFALG00000000193	VPS35 (ENSFALG00000000176) #32	ORC6 (ENSFALG00000028855) #33	MYLK3 (ENSFALG00000000153) #34	ENSFALG00000000152 #35	GPT2 (ENSFALG00000028158) #36
Passeriformes_g	ANCESTRAL SPECIES	17		ENSGT00940000159631	ENSGT00940000163228.d	ENSGT00940000165319	ENSGT00940000157553	ENSGT00940000159184	ENSGT00950000183186.B.a	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728.c #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Passeroidea	ANCESTRAL SPECIES	17		ENSGT00940000159631	ENSGT00940000163228.d	ENSGT00940000165319	ENSGT00940000157553	ENSGT00940000159184	ENSGT00950000183186.B.a	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728.c #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Zebra finch	MODERN SPECIES	2	ENSTGUG00000009156	ADAMTS18 (ENSTGUG00000009163)	ENSTGUG00000009150	VAT1L (ENSTGUG00000009137)	CLEC3A (ENSTGUG00000009128)	TDRD12 (ENSTGUG00000009121) #14	NUDT19 (ENSTGUG00000029501) #15	RGS9BP (ENSTGUG00000009112) #16	ENSTGUG00000027708	ANKRD27 (ENSTGUG00000009084) #17	PDCD5 (ENSTGUG00000021896) #18	ENSTGUG00000009048	DPY19L3 (ENSTGUG00000009029) #19	ZNF507 (ENSTGUG00000009020) #20	ENSTGUG00000021324	TSHZ3 (ENSTGUG00000009016) #22	ZNF536 (ENSTGUG00000009013) #23	URI1 (ENSTGUG00000008994) #24	CCNE1 (ENSTGUG00000008979) #25	ENSTGUG00000008970 #27	ENSTGUG00000026281 #27	C19orf12 (ENSTGUG00000029524) #26	ENSTGUG00000029697 #27	POP4 (ENSTGUG00000008953) #28	VSTM2B (ENSTGUG00000008950)	ENSTGUG00000027015	UQCRFS1 (ENSTGUG00000008947) #29	SHCBP1 (ENSTGUG00000008933) #31	ENSTGUG00000008928	VPS35 (ENSTGUG00000008891) #32	ENSTGUG00000008874 #33
Common canary	MODERN SPECIES	14	CDH8 (ENSSCAG00000003827)	ENSSCAG00000003841	ENSSCAG00000003845	ADAMTS18 (ENSSCAG00000003850)	ENSSCAG00000003863	VAT1L (ENSSCAG00000003922)	CLEC3A (ENSSCAG00000003931)	TDRD12 (ENSSCAG00000003944) #14	NUDT19 (ENSSCAG00000003973) #15	ANKRD27 (ENSSCAG00000003985) #17	RGS9BP (ENSSCAG00000004022) #16	PDCD5 (ENSSCAG00000004028) #18	ENSSCAG00000004044	DPY19L3 (ENSSCAG00000004072) #19	ZNF507 (ENSSCAG00000004080) #20	TSHZ3 (ENSSCAG00000004094) #22	ZNF536 (ENSSCAG00000004100) #23	URI1 (ENSSCAG00000004113) #24	CCNE1 (ENSSCAG00000004126) #25	ENSSCAG00000004133	C19orf12 (ENSSCAG00000004139) #26	PLEKHF1 (ENSSCAG00000004145) #27	POP4 (ENSSCAG00000004148) #28	UQCRFS1 (ENSSCAG00000004159) #29	SHCBP1 (ENSSCAG00000004167) #31	ENSSCAG00000004175	VPS35 (ENSSCAG00000004178) #32	ORC6 (ENSSCAG00000004180) #33	MYLK3 (ENSSCAG00000004186) #34	C16orf87 (ENSSCAG00000004191) #35	GPT2 (ENSSCAG00000004200) #36
Medium ground finch	MODERN SPECIES	111							VAT1L (ENSGFOG00000007207)	CLEC3A (ENSGFOG00000007213)	TDRD12 (ENSGFOG00000007226) #14	ANKRD27 (ENSGFOG00000007265) #17	RGS9BP (ENSGFOG00000007285) #16	PDCD5 (ENSGFOG00000007289) #18	ENSGFOG00000007300	DPY19L3 (ENSGFOG00000007325) #19	ZNF507 (ENSGFOG00000007342) #20	TSHZ3 (ENSGFOG00000007350) #22	ZNF536 (ENSGFOG00000007358) #23	URI1 (ENSGFOG00000007369) #24	CCNE1 (ENSGFOG00000007388) #25	ENSGFOG00000007409	C19orf12 (ENSGFOG00000007418) #26	PLEKHF1 (ENSGFOG00000007424) #27	POP4 (ENSGFOG00000007429) #28	UQCRFS1 (ENSGFOG00000007435) #29	SHCBP1 (ENSGFOG00000007436) #31	ENSGFOG00000007449	VPS35 (ENSGFOG00000007460) #32	ORC6 (ENSGFOG00000007472) #33	MYLK3 (ENSGFOG00000007482) #34	ENSGFOG00000007505	C16orf87 (ENSGFOG00000007510) #35
Great tit	MODERN SPECIES	2	FAAP24 (ENSPMJG00000003563) #11	CEP89 (ENSPMJG00000003559) #12	SLC7A9 (ENSPMJG00000003558) #13	CDH8 (ENSPMJG00000003533)	ADAMTS18 (ENSPMJG00000003468)	VAT1L (ENSPMJG00000003459)	CLEC3A (ENSPMJG00000003458)	TDRD12 (ENSPMJG00000003450) #14	NUDT19 (ENSPMJG00000003448) #15	RGS9BP (ENSPMJG00000003445) #16	ANKRD27 (ENSPMJG00000003422) #17	PDCD5 (ENSPMJG00000003396) #18	ENSPMJG00000003375	DPY19L3 (ENSPMJG00000003354) #19	ZNF507 (ENSPMJG00000003342) #20	TSHZ3 (ENSPMJG00000003314) #22	ZNF536 (ENSPMJG00000003297) #23	URI1 (ENSPMJG00000003203) #24	CCNE1 (ENSPMJG00000003196) #25	ENSPMJG00000003193	ENSPMJG00000003083 #26	PLEKHF1 (ENSPMJG00000003081) #27	POP4 (ENSPMJG00000003079) #28	VSTM2B (ENSPMJG00000003075)	UQCRFS1 (ENSPMJG00000003016) #29	SHCBP1 (ENSPMJG00000003015) #31	ENSPMJG00000002999	VPS35 (ENSPMJG00000002974) #32	ORC6 (ENSPMJG00000002970) #33	ENSPMJG00000002942	C16orf87 (ENSPMJG00000002939) #35
Neognathae_c	ANCESTRAL SPECIES	18	ENSGT00940000160021 #7	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Golden eagle	MODERN SPECIES	25	GPATCH1 (ENSACCG00020001248) #9	RHPN2 (ENSACCG00020001302) #10	FAAP24 (ENSACCG00020001327) #11	ENSACCG00020001338	CEP89 (ENSACCG00020001367) #12	ENSACCG00020001387	SLC7A9 (ENSACCG00020001411) #13	TDRD12 (ENSACCG00020001464) #14	NUDT19 (ENSACCG00020001499) #15	RGS9BP (ENSACCG00020001512) #16	ANKRD27 (ENSACCG00020001560) #17	PDCD5 (ENSACCG00020001650) #18	ENSACCG00020001678	DPY19L3 (ENSACCG00020001720) #19	ZNF507 (ENSACCG00020001759) #20	TSHZ3 (ENSACCG00020001775) #22	ZNF536 (ENSACCG00020001787) #23	URI1 (ENSACCG00020001806) #24	CCNE1 (ENSACCG00020001833) #25	ENSACCG00020001902	C19orf12 (ENSACCG00020001945) #26	PLEKHF1 (ENSACCG00020001956) #27	POP4 (ENSACCG00020001971) #28	VSTM2B (ENSACCG00020001990)	UQCRFS1 (ENSACCG00020002004) #29	ENSACCG00020002013	SHCBP1 (ENSACCG00020002035) #31	ENSACCG00020002051	VPS35 (ENSACCG00020002071) #32	ORC6 (ENSACCG00020002091) #33	C16orf87 (ENSACCG00020002109) #35
Kakapo	DUPLICATION
Kakapo	MODERN SPECIES	19	ENSSHBG00005011571 #7	GPATCH1 (ENSSHBG00005011591) #9	ENSSHBG00005011625 #10	ENSSHBG00005011638 #10	ENSSHBG00005011660 #11	CEP89 (ENSSHBG00005011674) #12	SLC7A9 (ENSSHBG00005011804) #13	TDRD12 (ENSSHBG00005014145) #14	NUDT19 (ENSSHBG00005014202) #15	ANKRD27 (ENSSHBG00005014210) #17	RGS9BP (ENSSHBG00005014236) #16	PDCD5 (ENSSHBG00005014245) #18	ENSSHBG00005014261	DPY19L3 (ENSSHBG00005014311) #19	ENSSHBG00005014347 #20	ENSSHBG00005000156 #22	ENSSHBG00005001350	ENSSHBG00005001409 #23	ENSSHBG00005001466 #24	ENSSHBG00005001492 #25	ENSSHBG00005001524	ENSSHBG00005001540 #26	ENSSHBG00005001553 #26	ENSSHBG00005001570 #27	LONP2 (ENSSHBG00005001588)	ENSSHBG00005001629	ENSSHBG00005001653	ENSSHBG00005001669	ENSSHBG00005001748	CNEP1R1 (ENSSHBG00005001851)	ENSSHBG00005001903
Kakapo	MODERN SPECIES	4	ENSSHBG00005000289	ENSSHBG00005000285	ENSSHBG00005000283	ENSSHBG00005000280	ENSSHBG00005000277	ENSSHBG00005000275	ENSSHBG00005000273	ENSSHBG00005000272	ENSSHBG00005000267	ENSSHBG00005000261 #7	ENSSHBG00005000249	ENSSHBG00005000247 #11	ENSSHBG00005000240	ENSSHBG00005000237	ENSSHBG00005000234 #20	ENSSHBG00005000231 #22	ENSSHBG00005000228	ENSSHBG00005000223 #23	ENSSHBG00005000217 #24	ENSSHBG00005000196 #25	ENSSHBG00005000184 #26	ENSSHBG00005000175 #27	ENSSHBG00005000164	ENSSHBG00005000141	ENSSHBG00005000122	ENSSHBG00005000095	ENSSHBG00005000089	ENSSHBG00005000087	ENSSHBG00005000083 #36	ENSSHBG00005000080	ENSSHBG00005000077
Galloanserae	ANCESTRAL SPECIES	12	ENSGT00940000160021 #7	ENSGT00940000162291.f #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Anatidae	ANCESTRAL SPECIES	17	ENSGT00940000160021 #7	ENSGT00940000162291.f #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Pink-footed goose	MODERN SPECIES	80														DPY19L3 (ENSABRG00000000675) #19	ZNF507 (ENSABRG00000000934) #20	TSHZ3 (ENSABRG00000001051) #22	ZNF536 (ENSABRG00000001124) #23	URI1 (ENSABRG00000001220) #24	CCNE1 (ENSABRG00000001263) #25	ENSABRG00000001301	PLEKHF1 (ENSABRG00000001339) #27	POP4 (ENSABRG00000001351) #28	VSTM2B (ENSABRG00000001368)	UQCRFS1 (ENSABRG00000001387) #29	SHCBP1 (ENSABRG00000001406) #31	ENSABRG00000001429	VPS35 (ENSABRG00000001695) #32	ORC6 (ENSABRG00000001721) #33	MYLK3 (ENSABRG00000001750) #34	C16orf87 (ENSABRG00000001820) #35	GPT2 (ENSABRG00000001845) #36
Duck	MODERN SPECIES	3										TDRD12 (ENSAPLG00000011417) #14	NUDT19 (ENSAPLG00000011800) #15	ANKRD27 (ENSAPLG00000011807) #17	PDCD5 (ENSAPLG00000026487) #18	DPY19L3 (ENSAPLG00000012920) #19	ZNF507 (ENSAPLG00000013158) #20	TSHZ3 (ENSAPLG00000011634) #22	ZNF536 (ENSAPLG00000013219) #23	URI1 (ENSAPLG00000017568) #24	CCNE1 (ENSAPLG00000013739) #25	ENSAPLG00000013924	C19orf12 (ENSAPLG00000019442) #26	PLEKHF1 (ENSAPLG00000011645) #27	POP4 (ENSAPLG00000014051) #28	UQCRFS1 (ENSAPLG00000002275) #29	SHCBP1 (ENSAPLG00000008932) #31	ENSAPLG00000020084	VPS35 (ENSAPLG00000009261) #32	ENSAPLG00000020114 #33	MYLK3 (ENSAPLG00000009568) #34	C16orf87 (ENSAPLG00000009799) #35	GPT2 (ENSAPLG00000009804) #36
Phasianidae	ANCESTRAL SPECIES	12	ENSGT00940000160021 #7	ENSGT00940000162291.f #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a.e #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077.lb #26	ENSGT00390000009077.mb.a #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34
Phasianidae_b	ANCESTRAL SPECIES	14	ENSGT00940000162291.f #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00940000166448	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a.e #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077.lb #26	ENSGT00390000009077.mb.a #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34
Turkey	MODERN SPECIES	4	ENSMGAG00000005213	ENSMGAG00000005229 #36	C16orf87 (ENSMGAG00000005255) #35	ORC6 (ENSMGAG00000005268) #33	MYLK3 (ENSMGAG00000005260) #34	ENSMGAG00000018317	ENSMGAG00000005307 #31	ENSMGAG00000005283 #32	ENSMGAG00000015592 #29	ENSMGAG00000005337 #28	ENSMGAG00000015596 #27	ENSMGAG00000018069 #26	ENSMGAG00000005421 #24	ENSMGAG00000022714 #23	ENSMGAG00000005440 #23	ENSMGAG00000015601 #22	ENSMGAG00000005461 #20	DPY19L3 (ENSMGAG00000005481) #19	ENSMGAG00000005527	ENSMGAG00000005555 #17	ENSMGAG00000005543 #18	ENSMGAG00000017074	ENSMGAG00000005608 #15	ENSMGAG00000005650 #13	ENSMGAG00000005691 #12	ENSMGAG00000005724 #11	ENSMGAG00000005729 #10	ENSMGAG00000019428 #9	ENSMGAG00000005775 #9	ENSMGAG00000005857 #7	SLC7A10 (ENSMGAG00000005866)
Chicken	MODERN SPECIES	2	WDR88 (ENSGALG00010024895) #8	GPATCH1 (ENSGALG00010025949) #9	RHPN2 (ENSGALG00010024878) #10	FAAP24 (ENSGALG00010024868) #11	CEP89 (ENSGALG00010024852) #12	SLC7A9 (ENSGALG00010024831) #13	ENSGALG00010024827 #14	ENSGALG00010025926	NUDT19 (ENSGALG00010024820) #15	RGS9BP (ENSGALG00010025919) #16	ANKRD27 (ENSGALG00010024806) #17	PDCD5 (ENSGALG00010024786) #18	ENSGALG00010024684	DPY19L3 (ENSGALG00010024657) #19	ZNF507 (ENSGALG00010024638) #20	TSHZ3 (ENSGALG00010024626) #22	ZNF536 (ENSGALG00010024544) #23	URI1 (ENSGALG00010024536) #24	CCNE1 (ENSGALG00010024008) #25	ENSGALG00010025899	C19orf12 (ENSGALG00010023993) #26	ENSGALG00010023981 #26	ENSGALG00010023972 #26	PLEKHF1 (ENSGALG00010023954) #27	POP4 (ENSGALG00010023896) #28	VSTM2B (ENSGALG00010023881)	UQCRFS1 (ENSGALG00010023871) #29	SHCBP1 (ENSGALG00010023854) #31	ENSGALG00010023832	VPS35 (ENSGALG00010023783) #32	ORC6 (ENSGALG00010023733) #33
Japanese quail	MODERN SPECIES	2	SLC7A10 (ENSCJPG00005014449)	LRP3 (ENSCJPG00005014448) #7	GPATCH1 (ENSCJPG00005014447) #9	RHPN2 (ENSCJPG00005014446) #10	FAAP24 (ENSCJPG00005014445) #11	CEP89 (ENSCJPG00005014444) #12	SLC7A9 (ENSCJPG00005014443) #13	TDRD12 (ENSCJPG00005014440) #14	NUDT19 (ENSCJPG00005014439) #15	RGS9BP (ENSCJPG00005014438) #16	ANKRD27 (ENSCJPG00005014437) #17	PDCD5 (ENSCJPG00005014436) #18	ENSCJPG00005014435	DPY19L3 (ENSCJPG00005014415) #19	ZNF507 (ENSCJPG00005014414) #20	TSHZ3 (ENSCJPG00005014409) #22	ZNF536 (ENSCJPG00005014399) #23	URI1 (ENSCJPG00005014395) #24	CCNE1 (ENSCJPG00005014393) #25	ENSCJPG00005014392	ENSCJPG00005014391 #26	ENSCJPG00005014390	ENSCJPG00005014389 #26	PLEKHF1 (ENSCJPG00005014388) #27	POP4 (ENSCJPG00005014386) #28	VSTM2B (ENSCJPG00005014385)	UQCRFS1 (ENSCJPG00005014384) #29	SHCBP1 (ENSCJPG00005014383) #31	VPS35 (ENSCJPG00005014382) #32	ORC6 (ENSCJPG00005014381) #33	MYLK3 (ENSCJPG00005014380) #34
African ostrich	MODERN SPECIES	737	SLC7A10 (ENSSCUG00000012058)	LRP3 (ENSSCUG00000012050) #7	GPATCH1 (ENSSCUG00000012047) #9	RHPN2 (ENSSCUG00000012043) #10	FAAP24 (ENSSCUG00000012036) #11	ENSSCUG00000012035	CEP89 (ENSSCUG00000012031) #12	SLC7A9 (ENSSCUG00000011997) #13	TDRD12 (ENSSCUG00000011970) #14	ENSSCUG00000011968 #15	RGS9BP (ENSSCUG00000011966) #16	ANKRD27 (ENSSCUG00000011958) #17	PDCD5 (ENSSCUG00000011956) #18	DPY19L3 (ENSSCUG00000011954) #19	ZNF507 (ENSSCUG00000011953) #20	TSHZ3 (ENSSCUG00000011945) #22	ZNF536 (ENSSCUG00000011942) #23	URI1 (ENSSCUG00000011931) #24	CCNE1 (ENSSCUG00000011925) #25	ENSSCUG00000011921	PLEKHF1 (ENSSCUG00000011920) #27	POP4 (ENSSCUG00000011917) #28	UQCRFS1 (ENSSCUG00000011911) #29	SHCBP1 (ENSSCUG00000011909) #31	ENSSCUG00000011904	VPS35 (ENSSCUG00000011901) #32	ORC6 (ENSSCUG00000011895) #33	MYLK3 (ENSSCUG00000011892) #34	GPT2 (ENSSCUG00000011886) #36	C16orf87 (ENSSCUG00000011880) #35	ENSSCUG00000011876
Australian saltwater crocodile	MODERN SPECIES	35	FAAP24 (ENSCPRG00005004323) #11	ENSCPRG00005004318	ENSCPRG00005004315	ENSCPRG00005004311	CEP89 (ENSCPRG00005004305) #12	SLC7A9 (ENSCPRG00005004298) #13	ENSCPRG00005004295	TDRD12 (ENSCPRG00005004257) #14	NUDT19 (ENSCPRG00005004246) #15	RGS9BP (ENSCPRG00005004245) #16	ANKRD27 (ENSCPRG00005004220) #17	PDCD5 (ENSCPRG00005004211) #18	ENSCPRG00005004190	DPY19L3 (ENSCPRG00005004159) #19	ZNF507 (ENSCPRG00005004153) #20	TSHZ3 (ENSCPRG00005004136) #22	ZNF536 (ENSCPRG00005004130) #23	URI1 (ENSCPRG00005004124) #24	CCNE1 (ENSCPRG00005004111) #25	ENSCPRG00005004104	C19orf12 (ENSCPRG00005004100) #26	PLEKHF1 (ENSCPRG00005004098) #27	POP4 (ENSCPRG00005004092) #28	UQCRFS1 (ENSCPRG00005004086) #29	ENSCPRG00005004073	SHCBP1 (ENSCPRG00005004067) #31	ENSCPRG00005004055	VPS35 (ENSCPRG00005004039) #32	ORC6 (ENSCPRG00005004032) #33	MYLK3 (ENSCPRG00005004027) #34	C16orf87 (ENSCPRG00005004023) #35
Cryptodira	ANCESTRAL SPECIES	14	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Testudinoidea	ANCESTRAL SPECIES	13	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021.a #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Emydidae	ANCESTRAL SPECIES	33	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021.a #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Three-toed box turtle	MODERN SPECIES	60	WDR88 (ENSTMTG00000022808) #8	GPATCH1 (ENSTMTG00000022805) #9	RHPN2 (ENSTMTG00000022802) #10	FAAP24 (ENSTMTG00000022798) #11	ENSTMTG00000022797	CEP89 (ENSTMTG00000022794) #12	SLC7A9 (ENSTMTG00000022791) #13	TDRD12 (ENSTMTG00000022781) #14	NUDT19 (ENSTMTG00000022778) #15	RGS9BP (ENSTMTG00000022775) #16	ANKRD27 (ENSTMTG00000022771) #17	ENSTMTG00000022770	ENSTMTG00000022765	DPY19L3 (ENSTMTG00000022759) #19	ZNF507 (ENSTMTG00000022756) #20	TSHZ3 (ENSTMTG00000022753) #22	ZNF536 (ENSTMTG00000022747) #23	URI1 (ENSTMTG00000022743) #24	CCNE1 (ENSTMTG00000022737) #25	ENSTMTG00000022732	PLEKHF1 (ENSTMTG00000022727) #27	POP4 (ENSTMTG00000022723) #28	VSTM2B (ENSTMTG00000022720)	UQCRFS1 (ENSTMTG00000022718) #29	SHCBP1 (ENSTMTG00000022715) #31	ENSTMTG00000022710	VPS35 (ENSTMTG00000022702) #32	ORC6 (ENSTMTG00000022700) #33	MYLK3 (ENSTMTG00000022699) #34	C16orf87 (ENSTMTG00000022698) #35	GPT2 (ENSTMTG00000022695) #36
painted turtle	MODERN SPECIES	4	WDR88 (ENSCPBG00000001046) #8	GPATCH1 (ENSCPBG00000000666) #9	RHPN2 (ENSCPBG00000000592) #10	FAAP24 (ENSCPBG00000000575) #11	ENSCPBG00000000531	CEP89 (ENSCPBG00000000457) #12	SLC7A9 (ENSCPBG00000000262) #13	TDRD12 (ENSCPBG00000000147) #14	NUDT19 (ENSCPBG00000000119) #15	RGS9BP (ENSCPBG00000016211) #16	ANKRD27 (ENSCPBG00000016194) #17	PDCD5 (ENSCPBG00000016192) #18	ENSCPBG00000016189	DPY19L3 (ENSCPBG00000016180) #19	ZNF507 (ENSCPBG00000016177) #20	TSHZ3 (ENSCPBG00000016175) #22	ZNF536 (ENSCPBG00000016167) #23	URI1 (ENSCPBG00000016148) #24	CCNE1 (ENSCPBG00000016144) #25	ENSCPBG00000016139	C19orf12 (ENSCPBG00000016137) #26	PLEKHF1 (ENSCPBG00000016135) #27	POP4 (ENSCPBG00000016132) #28	VSTM2B (ENSCPBG00000016128)	ENSCPBG00000016125	UQCRFS1 (ENSCPBG00000016122) #29	ENSCPBG00000016119	ENSCPBG00000016118	SHCBP1 (ENSCPBG00000016103) #31	ENSCPBG00000016095	VPS35 (ENSCPBG00000016092) #32
Testudinidae	ANCESTRAL SPECIES	17	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00420000029847 #14	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021.a #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00940000161356	ENSGT00390000001014 #29	ENSGT00940000161310 #31	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Abingdon island giant tortoise	MODERN SPECIES	2465																TSHZ3 (ENSCABG00000003309) #22	ZNF536 (ENSCABG00000003304) #23	URI1 (ENSCABG00000003239) #24	CCNE1 (ENSCABG00000003232) #25	C19orf12 (ENSCABG00000003227) #26	PLEKHF1 (ENSCABG00000003224) #27	POP4 (ENSCABG00000003221) #28
Goode s thornscrub tortoise	MODERN SPECIES	3	WDR88 (ENSGEVG00005009737) #8	GPATCH1 (ENSGEVG00005009654) #9	RHPN2 (ENSGEVG00005009604) #10	FAAP24 (ENSGEVG00005009583) #11	ENSGEVG00005009542	CEP89 (ENSGEVG00005009487) #12	SLC7A9 (ENSGEVG00005017897) #13	TDRD12 (ENSGEVG00005017875) #14	NUDT19 (ENSGEVG00005017853) #15	RGS9BP (ENSGEVG00005017844) #16	ANKRD27 (ENSGEVG00005017798) #17	PDCD5 (ENSGEVG00005017773) #18	ENSGEVG00005017634	DPY19L3 (ENSGEVG00005017231) #19	ZNF507 (ENSGEVG00005017111) #20	TSHZ3 (ENSGEVG00005017085) #22	ZNF536 (ENSGEVG00005017060) #23	URI1 (ENSGEVG00005017029) #24	CCNE1 (ENSGEVG00005016999) #25	ENSGEVG00005016978	C19orf12 (ENSGEVG00005016962) #26	PLEKHF1 (ENSGEVG00005016945) #27	POP4 (ENSGEVG00005016919) #28	VSTM2B (ENSGEVG00005016775)	UQCRFS1 (ENSGEVG00005016745) #29	SHCBP1 (ENSGEVG00005016588) #31	ENSGEVG00005016209	VPS35 (ENSGEVG00005016109) #32	ORC6 (ENSGEVG00005016083) #33	MYLK3 (ENSGEVG00005016013) #34	C16orf87 (ENSGEVG00005015988) #35
Chinese turtle	MODERN SPECIES	940				ENSPSIG00000013465	TDRD12 (ENSPSIG00000012970) #14	ENSPSIG00000001895	NUDT19 (ENSPSIG00000012955) #15	RGS9BP (ENSPSIG00000001892) #16	ANKRD27 (ENSPSIG00000012421) #17	PDCD5 (ENSPSIG00000012235) #18	ENSPSIG00000008489	DPY19L3 (ENSPSIG00000007940) #19	ZNF507 (ENSPSIG00000007531) #20	ENSPSIG00000001889	ENSPSIG00000001887	TSHZ3 (ENSPSIG00000007188) #22	ZNF536 (ENSPSIG00000007065) #23	URI1 (ENSPSIG00000016948) #24	CCNE1 (ENSPSIG00000016456) #25	ENSPSIG00000016381	C19orf12 (ENSPSIG00000016276) #26	PLEKHF1 (ENSPSIG00000016268) #27	POP4 (ENSPSIG00000015690) #28	ENSPSIG00000015651	UQCRFS1 (ENSPSIG00000015453) #29	ENSPSIG00000001884	SHCBP1 (ENSPSIG00000014494) #31	ENSPSIG00000014407	VPS35 (ENSPSIG00000014218) #32	ORC6 (ENSPSIG00000014037) #33	MYLK3 (ENSPSIG00000013680) #34
Anura	ANCESTRAL SPECIES	10	ENSGT00940000162291 #8	ENSGT00390000007074 #9	ENSGT00940000153837.a.b #10	ENSGT00390000009456 #11	ENSGT00390000018876 #12	ENSGT00730000111020.a	ENSGT00940000156370 #13	ENSGT00940000166448	ENSGT00420000029858 #15	ENSGT00940000153725.a.b.a #16	ENSGT00940000157021 #17	ENSGT00390000011085 #18	ENSGT00940000164020	ENSGT00530000063023.A.a #19	ENSGT00490000043434 #20	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a #23	ENSGT00390000002362 #24	ENSGT00940000156256 #25	ENSGT00390000006020	ENSGT00390000009077 #26	ENSGT00940000160728 #27	ENSGT00390000010067 #28	ENSGT00390000001014 #29	ENSGT00940000161356	ENSGT00940000158892.a.a	ENSGT00940000163206.a	ENSGT00390000007315 #32	ENSGT00390000007370 #33	ENSGT00940000160007 #34	ENSGT00390000009505 #35
Frog	MODERN SPECIES	4	gpatch1 (ENSXETG00000018276) #9	rhpn2 (ENSXETG00000018271) #10	faap24 (ENSXETG00000027542) #11	cep89 (ENSXETG00000018269) #12	ENSXETG00000041178	slc7a9 (ENSXETG00000018268) #13	tdrd12 (ENSXETG00000031945)	nudt19 (ENSXETG00000025567) #15	rgs9bp (ENSXETG00000013561) #16	ankrd27 (ENSXETG00000034953) #17	ENSXETG00000047664	pdcd5 (ENSXETG00000013573) #18	ENSXETG00000013574	dpy19l3 (ENSXETG00000031719) #19	znf507 (ENSXETG00000013603) #20	tshz3 (ENSXETG00000016288) #22	ENSXETG00000039283	znf536 (ENSXETG00000033671) #23	uri1 (ENSXETG00000012924) #24	plekhf1 (ENSXETG00000010768) #27	ccne1 (ENSXETG00000012929) #25	XB5931222 [provisional] (ENSXETG00000025560)	c19orf12 (ENSXETG00000046864) #26	pop4 (ENSXETG00000017598) #28	ENSXETG00000043047	vstm2b (ENSXETG00000008809)	ENSXETG00000039392	ENSXETG00000045938	uqcrfs1 (ENSXETG00000019495) #29	ENSXETG00000044205	shcbp1 (ENSXETG00000017069)
Leishan spiny toad	MODERN SPECIES	1	FAAP24 (ENSLLEG00000009186) #11	ENSLLEG00000009141	ENSLLEG00000009100	CEP89 (ENSLLEG00000008749) #12	SLC7A9 (ENSLLEG00000008648) #13	ENSLLEG00000008530	NUDT19 (ENSLLEG00000008431) #15	RGS9BP (ENSLLEG00000019401) #16	ANKRD27 (ENSLLEG00000018378) #17	PDCD5 (ENSLLEG00000018189) #18	ENSLLEG00000017733	ENSLLEG00000017692	DPY19L3 (ENSLLEG00000017486) #19	ZNF507 (ENSLLEG00000017432) #20	ENSLLEG00000017405	TSHZ3 (ENSLLEG00000017323) #22	ENSLLEG00000017296	ZNF536 (ENSLLEG00000017215) #23	ENSLLEG00000017177	ENSLLEG00000017164	URI1 (ENSLLEG00000016966) #24	ENSLLEG00000016895	CCNE1 (ENSLLEG00000016789) #25	ENSLLEG00000016721	C19orf12 (ENSLLEG00000016695) #26	PLEKHF1 (ENSLLEG00000016658) #27	ENSLLEG00000016638	ENSLLEG00000016383 #28	ENSLLEG00000016320	ENSLLEG00000016293	UQCRFS1 (ENSLLEG00000016247) #29
Coelacanth	MODERN SPECIES	575															ENSLACG00000015632	TSHZ3 (ENSLACG00000015505) #22	ZNF536 (ENSLACG00000010335) #23	URI1 (ENSLACG00000003319) #24	CCNE1 (ENSLACG00000002147) #25	zgc:162297 (ENSLACG00000001513)	si:ch211-260e23.9 (ENSLACG00000000036)