Myomorpha	ANCESTRAL SPECIES	20	ENSGT00940000156469	ENSGT00940000160021	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000153837.a.b	ENSGT00390000009456	ENSGT00390000018876	ENSGT00940000156370	ENSGT00420000029847	ENSGT00420000029858	ENSGT00940000153725.a.b.a	ENSGT00940000157021	ENSGT00390000011085	ENSGT00530000063023.A.a #20	ENSGT00490000043434 #21	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a	ENSGT00390000002362	ENSGT00940000156256	ENSGT00390000009077	ENSGT00940000160728	ENSGT00390000010067	ENSGT00940000161356
Muroidea	ANCESTRAL SPECIES	18	ENSGT00940000156469	ENSGT00940000160021	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000153837.a.b	ENSGT00390000009456	ENSGT00390000018876	ENSGT00940000156370	ENSGT00420000029847	ENSGT00420000029858	ENSGT00940000153725.a.b.a	ENSGT00940000157021	ENSGT00390000011085	ENSGT00530000063023.A.a #20	ENSGT00490000043434 #21	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a	ENSGT00390000002362	ENSGT00940000156256	ENSGT00390000009077	ENSGT00940000160728	ENSGT00390000010067	ENSGT00940000161356
Upper Galilee mountains blind mole rat	MODERN SPECIES	458														Dpy19l3 (ENSNGAG00000010668) #20	Zfp507 (ENSNGAG00000010990) #21	Tshz3 (ENSNGAG00000011318) #22
Muroidea_A	ANCESTRAL SPECIES	20	ENSGT00940000156469	ENSGT00940000160021	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000153837.a.b	ENSGT00390000009456	ENSGT00390000018876	ENSGT00940000156370	ENSGT00420000029847	ENSGT00420000029858	ENSGT00940000153725.a.b.a	ENSGT00940000157021	ENSGT00390000011085	ENSGT00530000063023.A.a #20	ENSGT00490000043434 #21	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a	ENSGT00390000002362	ENSGT00940000156256	ENSGT00390000009077	ENSGT00940000160728	ENSGT00390000010067	ENSGT00390000014208	ENSGT00940000161356	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000163087
Cricetidae	ANCESTRAL SPECIES	26	ENSGT00940000156469	ENSGT00940000160021	ENSGT00960000190924	ENSGT00390000007074	ENSGT00940000153837.a.b	ENSGT00390000009456	ENSGT00390000018876	ENSGT00940000156370	ENSGT00420000029847	ENSGT00420000029858	ENSGT00940000153725.a.b.a	ENSGT00940000157021	ENSGT00390000011085	ENSGT00530000063023.A.a #20	ENSGT00490000043434 #21	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a	ENSGT00390000002362	ENSGT00940000156256	ENSGT00390000009077	ENSGT00940000160728	ENSGT00390000010067	ENSGT00390000014208	ENSGT00940000161356	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000163087
Cricetidae_B	ANCESTRAL SPECIES	25	ENSGT00940000156469	ENSGT00940000160021	ENSGT00960000190924	ENSGT00390000007074	ENSGT00940000153837.a.b	ENSGT00390000009456	ENSGT00390000018876	ENSGT00940000156370	ENSGT00420000029847	ENSGT00420000029858	ENSGT00940000153725.a.b.a	ENSGT00940000157021	ENSGT00390000011085	ENSGT00530000063023.A.a #20	ENSGT00490000043434 #21	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a	ENSGT00390000002362	ENSGT00940000156256	ENSGT00390000009077	ENSGT00940000160728	ENSGT00390000010067	ENSGT00390000014208	ENSGT00940000161356	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000163087
Northern American deer mouse	MODERN SPECIES		Lrp3 (ENSPEMG00000000320)	ENSPEMG00000024856	Gpatch1 (ENSPEMG00000000636)	Rhpn2 (ENSPEMG00000020482)	Faap24 (ENSPEMG00000021083)	Cep89 (ENSPEMG00000020557)	Slc7a9 (ENSPEMG00000020346)	Tdrd12 (ENSPEMG00000009233)	ENSPEMG00000022578	Nudt19 (ENSPEMG00000020519)	Rgs9bp (ENSPEMG00000001852)	Ankrd27 (ENSPEMG00000020526)	Pdcd5 (ENSPEMG00000005766)	Dpy19l3 (ENSPEMG00000020636) #20	Zfp507 (ENSPEMG00000023579) #21	Tshz3 (ENSPEMG00000024219) #22	Zfp536 (ENSPEMG00000014198)	Uri1 (ENSPEMG00000021114)	Ccne1 (ENSPEMG00000020299)	1600014C10Rik (ENSPEMG00000030733)	ENSPEMG00000014034	ENSPEMG00000026755	ENSPEMG00000019774	ENSPEMG00000026788	Vstm2b (ENSPEMG00000021557)	ENSPEMG00000024496	Zfp619 (ENSPEMG00000021007)	ENSPEMG00000024631	ENSPEMG00000027743	Plekhg2 (ENSPEMG00000017217)	Zfp36 (ENSPEMG00000007506)
Prairie vole	MODERN SPECIES	115	Slc7a10 (ENSMOCG00000020699)	Lrp3 (ENSMOCG00000007412)	Gpatch1 (ENSMOCG00000000174)	Rhpn2 (ENSMOCG00000015268)	Faap24 (ENSMOCG00000017357)	Cep89 (ENSMOCG00000000261)	Slc7a9 (ENSMOCG00000001789)	Tdrd12 (ENSMOCG00000002366)	Nudt19 (ENSMOCG00000017828)	Rgs9bp (ENSMOCG00000002309)	Ankrd27 (ENSMOCG00000013668)	ENSMOCG00000016930	Dpy19l3 (ENSMOCG00000009571) #20	Zfp507 (ENSMOCG00000017422) #21	ENSMOCG00000015706	Tshz3 (ENSMOCG00000012794) #22	Zfp536 (ENSMOCG00000011684)	Uri1 (ENSMOCG00000018448)	Ccne1 (ENSMOCG00000008837)	1600014C10Rik (ENSMOCG00000007337)	Plekhf1 (ENSMOCG00000017276)
Cricetinae	ANCESTRAL SPECIES	39	ENSGT00940000162646	ENSGT00940000156469	ENSGT00940000160021	ENSGT00390000007074	ENSGT00940000153837.a.b	ENSGT00390000009456	ENSGT00390000018876	ENSGT00940000156370	ENSGT00420000029847	ENSGT00420000029858	ENSGT00940000153725.a.b.a	ENSGT00940000157021	ENSGT00390000011085	ENSGT00530000063023.A.a #20	ENSGT00490000043434 #21	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a	ENSGT00390000002362	ENSGT00940000156256	ENSGT00390000009077	ENSGT00940000160728	ENSGT00390000010067
Chinese hamster chok1gshd	MODERN SPECIES	282	Slc7a10 (ENSCGRG00001006085)	Lrp3 (ENSCGRG00001000089)	Gpatch1 (ENSCGRG00001016736)	Rhpn2 (ENSCGRG00001013772)	Faap24 (ENSCGRG00001012863)	ENSCGRG00001000081	Slc7a9 (ENSCGRG00001005745)	Tdrd12 (ENSCGRG00001021407)	Nudt19 (ENSCGRG00001017272)	Rgs9bp (ENSCGRG00001006642)	Ankrd27 (ENSCGRG00001018594)	ENSCGRG00001016049	ENSCGRG00001014250	Dpy19l3 (ENSCGRG00001022217) #20	Zfp507 (ENSCGRG00001020787) #21	Tshz3 (ENSCGRG00001015566) #22	Zfp536 (ENSCGRG00001014547)	Uri1 (ENSCGRG00001019892)	Ccne1 (ENSCGRG00001015867)	1600014C10Rik (ENSCGRG00001014004)	Plekhf1 (ENSCGRG00001014179)	ENSCGRG00001012663	ENSCGRG00001013673
Murinae	ANCESTRAL SPECIES	19	ENSGT00940000156469	ENSGT00940000160021	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000153837.a.b	ENSGT00390000009456	ENSGT00390000018876	ENSGT00940000156370	ENSGT00420000029847	ENSGT00420000029858	ENSGT00940000153725.a.b.a	ENSGT00940000157021	ENSGT00390000011085	ENSGT00530000063023.A.a #20	ENSGT00490000043434 #21	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a	ENSGT00390000002362	ENSGT00940000156256	ENSGT00390000009077	ENSGT00940000160728	ENSGT00390000010067	ENSGT00390000014208.y.b
Mus	ANCESTRAL SPECIES		ENSGT00940000156469	ENSGT00940000160021	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000153837.a.b	ENSGT00390000009456	ENSGT00390000018876	ENSGT00940000156370	ENSGT00420000029847	ENSGT00420000029858	ENSGT00940000153725.a.b.a	ENSGT00940000157021	ENSGT00390000011085	ENSGT00530000063023.A.a #20	ENSGT00490000043434 #21	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a	ENSGT00390000002362	ENSGT00940000156256	ENSGT00390000009077	ENSGT00940000160728	ENSGT00390000010067	ENSGT00390000014208.y.b	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000161356	ENSGT00390000014208.z	ENSGT00390000014208.y.a	ENSGT00940000153165.a.a.c.b.a.b.a	ENSGT00940000155965.t	ENSGT00940000163075	ENSGT01080000257333.A.a.b.a.b.b.a.a.d.a
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000156469	ENSGT00940000160021	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000153837.a.b	ENSGT00390000009456	ENSGT00390000018876	ENSGT00940000156370	ENSGT00420000029847	ENSGT00420000029858	ENSGT00940000153725.a.b.a	ENSGT00940000157021	ENSGT00390000011085	ENSGT00530000063023.A.a #20	ENSGT00490000043434 #21	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a	ENSGT00390000002362	ENSGT00940000156256	ENSGT00390000009077	ENSGT00940000160728.e	ENSGT00390000010067	ENSGT00390000014208.y.b	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000161356	ENSGT00390000014208.z	ENSGT00390000014208.y.a	ENSGT00940000154469.a.a.b.b.b	ENSGT00950000183069.b.b.a.a.e.a.a.b.a.b.b	ENSGT00940000153165.a.a.c.b.a.b.a	ENSGT00940000155965.t
Mus_B	ANCESTRAL SPECIES		ENSGT00940000156469	ENSGT00940000160021	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000153837.a.b	ENSGT00390000009456	ENSGT00390000018876	ENSGT00940000156370	ENSGT00420000029847	ENSGT00420000029858	ENSGT00940000153725.a.b.a	ENSGT00940000157021	ENSGT00390000011085	ENSGT00530000063023.A.a #20	ENSGT00490000043434 #21	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a	ENSGT00390000002362	ENSGT00940000156256	ENSGT00390000009077	ENSGT00940000160728.e	ENSGT00390000010067	ENSGT00390000014208.y.b.a	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000161356	ENSGT00390000014208.z	ENSGT00390000014208.y.a.a.a	ENSGT00940000154469.a.a.b.b.b	ENSGT00950000183069.b.b.a.a.e.a.a.b.a.b.b	ENSGT00940000153165.a.a.c.b.a.b.a	ENSGT00940000155965.t
Mus_C	ANCESTRAL SPECIES	32	ENSGT00940000156469	ENSGT00940000160021	ENSGT00940000162291	ENSGT00390000007074	ENSGT00940000153837.a.b	ENSGT00390000009456	ENSGT00390000018876	ENSGT00940000156370	ENSGT00420000029847	ENSGT00420000029858	ENSGT00940000153725.a.b.a	ENSGT00940000157021	ENSGT00390000011085	ENSGT00530000063023.A.a #20	ENSGT00490000043434 #21	ENSGT00950000183051.b.a #22	ENSGT00940000156397.a.a	ENSGT00390000002362	ENSGT00940000156256	ENSGT00390000009077	ENSGT00940000160728.e	ENSGT00390000010067	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000161356	ENSGT00940000154469.a.a.b.b.b
spretus	MODERN SPECIES	16	Cebpg (MGP_SPRETEiJ_G0030677)	Cebpa (MGP_SPRETEiJ_G0030678)	Slc7a10 (MGP_SPRETEiJ_G0030679)	Lrp3 (MGP_SPRETEiJ_G0030680)	Gpatch1 (MGP_SPRETEiJ_G0030681)	Rhpn2 (MGP_SPRETEiJ_G0030682)	Faap24 (MGP_SPRETEiJ_G0030683)	Cep89 (MGP_SPRETEiJ_G0030684)	Slc7a9 (MGP_SPRETEiJ_G0030685)	Tdrd12 (MGP_SPRETEiJ_G0030686)	Rgs9bp (MGP_SPRETEiJ_G0030688)	Ankrd27 (MGP_SPRETEiJ_G0030689)	Pdcd5 (MGP_SPRETEiJ_G0030690)	Dpy19l3 (MGP_SPRETEiJ_G0030691) #20	Zfp507 (MGP_SPRETEiJ_G0030692) #21	Tshz3 (MGP_SPRETEiJ_G0030693) #22	Zfp536 (MGP_SPRETEiJ_G0030694)	Uri1 (MGP_SPRETEiJ_G0030695)	Ccne1 (MGP_SPRETEiJ_G0030696)	1600014C10Rik (MGP_SPRETEiJ_G0030697)	Plekhf1 (MGP_SPRETEiJ_G0030698)	Pop4 (MGP_SPRETEiJ_G0030699)	MGP_SPRETEiJ_G0030700	Zfp619 (MGP_SPRETEiJ_G0030701)	Vstm2b (MGP_SPRETEiJ_G0030702)	AI987944 (MGP_SPRETEiJ_G0030703)	AW146154 (MGP_SPRETEiJ_G0030704)	MGP_SPRETEiJ_G0030705	MGP_SPRETEiJ_G0030706	Zfp788 (MGP_SPRETEiJ_G0030707)	MGP_SPRETEiJ_G0030708
Steppe mouse	MODERN SPECIES	3056										ENSMSIG00000018080	Rgs9bp (ENSMSIG00000018095)	Ankrd27 (ENSMSIG00000018102)	Pdcd5 (ENSMSIG00000018284)	Dpy19l3 (ENSMSIG00000018318) #20	Zfp507 (ENSMSIG00000018409) #21	Tshz3 (ENSMSIG00000018467) #22
Mouse	MODERN SPECIES	16	Slc7a10 (ENSMUSG00000030495)	Lrp3 (ENSMUSG00000001802)	Wdr88 (ENSMUSG00000118454)	Gpatch1 (ENSMUSG00000063808)	Rhpn2 (ENSMUSG00000030494)	Faap24 (ENSMUSG00000030493)	Cep89 (ENSMUSG00000023072)	Slc7a9 (ENSMUSG00000030492)	Tdrd12 (ENSMUSG00000030491)	Nudt19 (ENSMUSG00000034875)	Rgs9bp (ENSMUSG00000056043)	Ankrd27 (ENSMUSG00000034867)	Pdcd5 (ENSMUSG00000030417)	Dpy19l3 (ENSMUSG00000043671) #20	Zfp507 (ENSMUSG00000044452) #21	Tshz3 (ENSMUSG00000021217) #22	Zfp536 (ENSMUSG00000043456)	Uri1 (ENSMUSG00000030421)	Ccne1 (ENSMUSG00000002068)	1600014C10Rik (ENSMUSG00000054676)	Plekhf1 (ENSMUSG00000074170)	Pop4 (ENSMUSG00000030423)	Gm5591 (ENSMUSG00000060565)	Gm5114 (ENSMUSG00000053742)	Zfp619 (ENSMUSG00000068959)	Vstm2b (ENSMUSG00000039257)	4930433I11Rik (ENSMUSG00000091692)	Gm4884 (ENSMUSG00000048312)	Gm5592 (ENSMUSG00000072259)	AI987944 (ENSMUSG00000056383)	Vmn2r57 (ENSMUSG00000066537)
Ryukyu mouse	MODERN SPECIES	16	Cebpa (MGP_CAROLIEiJ_G0029579)	Slc7a10 (MGP_CAROLIEiJ_G0029580)	Lrp3 (MGP_CAROLIEiJ_G0029581)	Gpatch1 (MGP_CAROLIEiJ_G0029582)	Rhpn2 (MGP_CAROLIEiJ_G0029583)	Faap24 (MGP_CAROLIEiJ_G0029584)	Cep89 (MGP_CAROLIEiJ_G0029585)	Slc7a9 (MGP_CAROLIEiJ_G0029586)	Tdrd12 (MGP_CAROLIEiJ_G0029587)	Nudt19 (MGP_CAROLIEiJ_G0029588)	Rgs9bp (MGP_CAROLIEiJ_G0029589)	Ankrd27 (MGP_CAROLIEiJ_G0029590)	MGP_CAROLIEiJ_G0029591	Dpy19l3 (MGP_CAROLIEiJ_G0029592) #20	Zfp507 (MGP_CAROLIEiJ_G0029593) #21	Tshz3 (MGP_CAROLIEiJ_G0029594) #22	Zfp536 (MGP_CAROLIEiJ_G0029595)	Uri1 (MGP_CAROLIEiJ_G0029596)	Ccne1 (MGP_CAROLIEiJ_G0029597)	MGP_CAROLIEiJ_G0029598	Plekhf1 (MGP_CAROLIEiJ_G0029599)	Pop4 (MGP_CAROLIEiJ_G0029600)	Zfp619 (MGP_CAROLIEiJ_G0029602)	Vstm2b (MGP_CAROLIEiJ_G0029603)	AI987944 (MGP_CAROLIEiJ_G0029604)	MGP_CAROLIEiJ_G0029605	MGP_CAROLIEiJ_G0029606	Zfp788 (MGP_CAROLIEiJ_G0029608)	MGP_CAROLIEiJ_G0029610	MGP_CAROLIEiJ_G0029609	MGP_CAROLIEiJ_G0029611
Shrew mouse	MODERN SPECIES		Cebpa (MGP_PahariEiJ_G0012813)	Slc7a10 (MGP_PahariEiJ_G0012814)	Lrp3 (MGP_PahariEiJ_G0012815)	Gpatch1 (MGP_PahariEiJ_G0012816)	Rhpn2 (MGP_PahariEiJ_G0012817)	Faap24 (MGP_PahariEiJ_G0012818)	Cep89 (MGP_PahariEiJ_G0012819)	Slc7a9 (MGP_PahariEiJ_G0012820)	Tdrd12 (MGP_PahariEiJ_G0012821)	Nudt19 (MGP_PahariEiJ_G0012822)	Rgs9bp (MGP_PahariEiJ_G0012823)	Ankrd27 (MGP_PahariEiJ_G0012824)	MGP_PahariEiJ_G0012825	Dpy19l3 (MGP_PahariEiJ_G0012826) #20	Zfp507 (MGP_PahariEiJ_G0012827) #21	Tshz3 (MGP_PahariEiJ_G0012828) #22	Zfp536 (MGP_PahariEiJ_G0012829)	Uri1 (MGP_PahariEiJ_G0012830)	Ccne1 (MGP_PahariEiJ_G0012831)	1600014C10Rik (MGP_PahariEiJ_G0012832)	Plekhf1 (MGP_PahariEiJ_G0012833)	MGP_PahariEiJ_G0012834	Vstm2b (MGP_PahariEiJ_G0012835)	MGP_PahariEiJ_G0012836	AI987944 (MGP_PahariEiJ_G0012838)	2610021A01Rik (MGP_PahariEiJ_G0012839)	MGP_PahariEiJ_G0012840	Zfp788 (MGP_PahariEiJ_G0012841)	MGP_PahariEiJ_G0012842	Siglecf (MGP_PahariEiJ_G0012843)	Siglecg (MGP_PahariEiJ_G0012844)
Rat	MODERN SPECIES		Wdr88 (ENSRNOG00000037393)	Gpatch1 (ENSRNOG00000011584)	Snrpg (ENSRNOG00000032232)	Rhpn2 (ENSRNOG00000011885)	Faap24 (ENSRNOG00000022393)	Cep89 (ENSRNOG00000012140)	Slc7a9 (ENSRNOG00000012344)	Tdrd12 (ENSRNOG00000012719)	AC136661.1 (ENSRNOG00000037380)	Nudt19 (ENSRNOG00000059386)	Rgs9bp (ENSRNOG00000012877)	Ankrd27 (ENSRNOG00000052814)	Pdcd5 (ENSRNOG00000068327)	Dpy19l3 (ENSRNOG00000021573) #20	Zfp507 (ENSRNOG00000013565) #21	Tshz3 (ENSRNOG00000013938) #22	RGD1562402 (ENSRNOG00000031859)	Zfp536 (ENSRNOG00000014163)	Uri1 (ENSRNOG00000014463)	Ccne1 (ENSRNOG00000014786)	LOC690000 (ENSRNOG00000014966)	Plekhf1 (ENSRNOG00000027724)	Pop4 (ENSRNOG00000027646)	Marf1-ps1 (ENSRNOG00000051237)	LOC690114 (ENSRNOG00000027370)	LOC365238 (ENSRNOG00000015168)	LOC108348090 (ENSRNOG00000067296)	Zfp939 (ENSRNOG00000064970)	Zfp619 (ENSRNOG00000066986)	LOC102548320 (ENSRNOG00000069276)	Cdc42se2 (ENSRNOG00000037364)
Lesser Egyptian jerboa	MODERN SPECIES	73	Cebpg (ENSJJAG00000009499)	ENSJJAG00000014105	Slc7a10 (ENSJJAG00000006090)	Lrp3 (ENSJJAG00000017356)	Gpatch1 (ENSJJAG00000023765)	Rhpn2 (ENSJJAG00000001747)	ENSJJAG00000012680	Cep89 (ENSJJAG00000024207)	Slc7a9 (ENSJJAG00000014613)	ENSJJAG00000018149	Rgs9bp (ENSJJAG00000012886)	Ankrd27 (ENSJJAG00000016506)	ENSJJAG00000016867	Dpy19l3 (ENSJJAG00000011397) #20	ENSJJAG00000014559 #21	ENSJJAG00000018135 #22	Zfp536 (ENSJJAG00000005397)	Uri1 (ENSJJAG00000017190)	Ccne1 (ENSJJAG00000013552)	1600014C10Rik (ENSJJAG00000015651)	Plekhf1 (ENSJJAG00000011982)	Pop4 (ENSJJAG00000013376)	Vstm2b (ENSJJAG00000022517)	Rnf6 (ENSJJAG00000023994)	Cdk8 (ENSJJAG00000009532)	Wasf3 (ENSJJAG00000018294)	Gpr12 (ENSJJAG00000012507)	Usp12 (ENSJJAG00000019341)	Rasl11a (ENSJJAG00000020910)	Gtf3a (ENSJJAG00000011501)	Mtif3 (ENSJJAG00000013006)