Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00940000160919	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841	ENSGT00390000005532.l #12	ENSGT00940000159714 #13	ENSGT00390000013558.a.b #14	ENSGT00730000111059.b #15	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #26	ENSGT00930000151037 #27	ENSGT00940000158337 #30	ENSGT00940000153876.A #31	ENSGT00940000163259.b	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182839.B.a.b	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000168345	ENSGT01010000222287.A
Perciformes	ANCESTRAL SPECIES	4	ENSGT00940000160919	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841	ENSGT00390000005532.l #12	ENSGT00940000159714 #13	ENSGT00390000013558.a.b #14	ENSGT00730000111059.b #15	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #26	ENSGT00930000151037 #27	ENSGT00940000158337 #30	ENSGT00940000153876.A #31	ENSGT00940000163259.b	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182839.B.a.b	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000168345	ENSGT01010000222287.A
Cottioidei	ANCESTRAL SPECIES	2	ENSGT00940000160919	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841	ENSGT00390000005532.l #12	ENSGT00940000159714 #13	ENSGT00390000013558.a.b #14	ENSGT00730000111059.b #15	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #26	ENSGT00930000151037 #27	ENSGT00940000158337 #30	ENSGT00940000153876.A #31	ENSGT00940000163259.b	ENSGT00940000161154.b #32	ENSGT01050000244850.A.b.a.b #33	ENSGT00390000000903.b.b	ENSGT00940000167073 #35	ENSGT00940000163428.a.a.b #36	ENSGT00940000159065.a	ENSGT00940000155473.c.a #37
Stickleback	MODERN SPECIES	11	ENSGACG00000005216 #7	mib2 (ENSGACG00000005209) #8	ubiad1 (ENSGACG00000005205) #9	MMP23B (ENSGACG00000005198) #10	cdk11b (ENSGACG00000005177) #11	szrd1 (ENSGACG00000005166) #12	atp13a2 (ENSGACG00000005124) #13	SDHB (ENSGACG00000005072) #14	ATAD3A (ENSGACG00000005036) #15	ENSGACG00000005033 #16	TMEM240 (ENSGACG00000005027) #17	otud3 (ENSGACG00000005021) #18	bcas2 (ENSGACG00000004981) #19	trim33 (ENSGACG00000004973) #20	slc66a1 (ENSGACG00000004944) #21	nr1h5 (ENSGACG00000004938) #22	BRPF3 (ENSGACG00000004924) #23	MAPK13 (ENSGACG00000004911) #24	ENSGACG00000004910 #25	angptl7 (ENSGACG00000004901) #26	mtor (ENSGACG00000004869) #27	ENSGACG00000004864 #28	ENSGACG00000004861 #29	agrn (ENSGACG00000004839) #30	ptpn11b (ENSGACG00000004807) #31	CHST13 (ENSGACG00000004801) #32	PLXNA1 (ENSGACG00000004780) #33	ENSGACG00000004778 #34	ENSGACG00000004776 #35	twist3 (ENSGACG00000004773) #36	VDR (ENSGACG00000004763) #37
Lumpfish	MODERN SPECIES	22	ENSCLMG00005016266	mib2 (ENSCLMG00005014140) #8	ubiad1 (ENSCLMG00005014130) #9	MMP23B (ENSCLMG00005014128) #10	cdk11b (ENSCLMG00005010941) #11	ENSCLMG00005010912	szrd1 (ENSCLMG00005010908) #12	atp13a2 (ENSCLMG00005010814) #13	SDHB (ENSCLMG00005010609) #14	ATAD3A (ENSCLMG00005010599) #15	ENSCLMG00005010592 #17	otud3 (ENSCLMG00005010589) #18	bcas2 (ENSCLMG00005010587) #19	trim33 (ENSCLMG00005010526) #20	slc66a1 (ENSCLMG00005010524) #21	nr1h5 (ENSCLMG00005010508) #22	BRPF3 (ENSCLMG00005010506) #23	ENSCLMG00005010485 #24	ENSCLMG00005010483 #25	angptl7 (ENSCLMG00005010480) #26	mtor (ENSCLMG00005007384) #27	agrn (ENSCLMG00005000370) #30	ptpn11b (ENSCLMG00005000196) #31	RNF223 (ENSCLMG00005000189)	CHST13 (ENSCLMG00005000184) #32	ENSCLMG00005000178	PLXNA1 (ENSCLMG00005000154) #33	chchd6a (ENSCLMG00005000119)	ENSCLMG00005000106 #35	ENSCLMG00005000091	ENSCLMG00005000067 #36
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00940000160919	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841	ENSGT00390000005532.l #12	ENSGT00940000159714 #13	ENSGT00390000013558.a.b #14	ENSGT00730000111059.b #15	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #26	ENSGT00930000151037 #27	ENSGT00940000158337 #30	ENSGT00940000153876.A #31	ENSGT00940000163259.b	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182839.B.a.b	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000168345	ENSGT01010000222287.A
Channel bull blenny	MODERN SPECIES	21	TTLL10 (ENSCGOG00000007798)	mib2 (ENSCGOG00000007809) #8	ubiad1 (ENSCGOG00000007922) #9	MMP23B (ENSCGOG00000007923) #10	cdk11b (ENSCGOG00000007934) #11	ENSCGOG00000008057	szrd1 (ENSCGOG00000008063) #12	atp13a2 (ENSCGOG00000008065) #13	SDHB (ENSCGOG00000008150) #14	ATAD3A (ENSCGOG00000008682) #15	TMEM240 (ENSCGOG00000009486) #17	otud3 (ENSCGOG00000009496) #18	bcas2 (ENSCGOG00000009515) #19	trim33 (ENSCGOG00000009637) #20	slc66a1 (ENSCGOG00000010822) #21	nr1h5 (ENSCGOG00000010825) #22	BRPF3 (ENSCGOG00000010830) #23	MAPK13 (ENSCGOG00000010850) #24	ENSCGOG00000011077 #25	mtor (ENSCGOG00000011183) #27	angptl7 (ENSCGOG00000014940) #26	agrn (ENSCGOG00000014988) #30	ptpn11b (ENSCGOG00000016909) #31	RNF223 (ENSCGOG00000017557)	DENND2C (ENSCGOG00000017560)	ampd1 (ENSCGOG00000017617)	ENSCGOG00000018979	csde1 (ENSCGOG00000019005)	SIKE1 (ENSCGOG00000020182)	ENSCGOG00000020185	HTR6 (ENSCGOG00000020186)
Pike perch	MODERN SPECIES	7	TTLL10 (ENSSLUG00000001258)	mib2 (ENSSLUG00000000981) #8	ubiad1 (ENSSLUG00000000885) #9	MMP23B (ENSSLUG00000000879) #10	cdk11b (ENSSLUG00000000718) #11	ENSSLUG00000000660	szrd1 (ENSSLUG00000000656) #12	atp13a2 (ENSSLUG00000000385) #13	SDHB (ENSSLUG00000000241) #14	ENSSLUG00000000201 #15	TMEM240 (ENSSLUG00000000166) #17	otud3 (ENSSLUG00000000162) #18	bcas2 (ENSSLUG00000025821) #19	trim33 (ENSSLUG00000025816) #20	slc66a1 (ENSSLUG00000025813) #21	nr1h5 (ENSSLUG00000025811) #22	BRPF3 (ENSSLUG00000025809) #23	MAPK13 (ENSSLUG00000025806) #24	ENSSLUG00000025800 #25	angptl7 (ENSSLUG00000025795) #26	mtor (ENSSLUG00000025759) #27	agrn (ENSSLUG00000025665) #30	ptpn11b (ENSSLUG00000025566) #31	RNF223 (ENSSLUG00000025560)	DENND2C (ENSSLUG00000025554)	ampd1 (ENSSLUG00000025520)	ENSSLUG00000025478	csde1 (ENSSLUG00000025415)	SIKE1 (ENSSLUG00000025370)	ENSSLUG00000025369	ENSSLUG00000025368
Eupecaria_C	ANCESTRAL SPECIES	5	ENSGT00940000160919	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841	ENSGT00390000005532.l #12	ENSGT00940000159714 #13	ENSGT00390000013558.a.b #14	ENSGT00730000111059.b #15	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #26	ENSGT00930000151037 #27	ENSGT00940000158337 #30	ENSGT00940000153876.A #31	ENSGT00940000163259.b	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182839.B.a.b	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000168345	ENSGT01010000222287.A
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	20	ENSGT00940000160919	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841	ENSGT00390000005532.l #12	ENSGT00940000159714 #13	ENSGT00390000013558.a.b #14	ENSGT00730000111059.b #15	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #26	ENSGT00930000151037 #27	ENSGT00940000158337 #30	ENSGT00940000153876.A #31	ENSGT00940000163259.b	ENSGT00950000182931.B.a.b	ENSGT00950000183011.c.a.a	ENSGT00950000182839.B.a.b	ENSGT00390000016950	ENSGT00390000018003.a	ENSGT00940000168345	ENSGT01010000222287.A
European seabass	MODERN SPECIES	14	ENSDLAG00005010663	mib2 (ENSDLAG00005010729) #8	ubiad1 (ENSDLAG00005029746) #9	ENSDLAG00005012175 #10	cdk11b (ENSDLAG00005012222) #11	ENSDLAG00005033030	szrd1 (ENSDLAG00005030755) #12	atp13a2 (ENSDLAG00005014127) #13	ENSDLAG00005016007 #14	ENSDLAG00005016300 #15	ENSDLAG00005026527 #17	ENSDLAG00005016579 #18	ENSDLAG00005030653 #19	trim33 (ENSDLAG00005016596) #20	slc66a1 (ENSDLAG00005016846) #21	nr1h5 (ENSDLAG00005016862) #22	ENSDLAG00005016886 #23	ENSDLAG00005016904 #24	ENSDLAG00005017053 #25	ENSDLAG00005034287 #27	ENSDLAG00005019287 #26	ENSDLAG00005019363 #30	ENSDLAG00005022089 #31	ENSDLAG00005034563	DENND2C (ENSDLAG00005032504)	ENSDLAG00005022825	ENSDLAG00005023188	CSDE1 (ENSDLAG00005023227)	ENSDLAG00005031029	ENSDLAG00005023929	ENSDLAG00005033304
Large yellow croaker	MODERN SPECIES	487	TTLL10 (ENSLCRG00005022029)	mib2 (ENSLCRG00005000895) #8	ubiad1 (ENSLCRG00005004012) #9	MMP23B (ENSLCRG00005004013) #10	cdk11b (ENSLCRG00005004029) #11	ENSLCRG00005006490	szrd1 (ENSLCRG00005006491) #12	atp13a2 (ENSLCRG00005006502) #13	SDHB (ENSLCRG00005006667) #14	ATAD3A (ENSLCRG00005006903) #15	TMEM240 (ENSLCRG00005006946) #17	otud3 (ENSLCRG00005006947) #18	bcas2 (ENSLCRG00005006950) #19	trim33 (ENSLCRG00005006953) #20	slc66a1 (ENSLCRG00005006958) #21	nr1h5 (ENSLCRG00005006959) #22	BRPF3 (ENSLCRG00005006963) #23	MAPK13 (ENSLCRG00005006968) #24	ENSLCRG00005006978 #25	mtor (ENSLCRG00005006997) #27	angptl7 (ENSLCRG00005007070) #26	agrn (ENSLCRG00005007112) #30	ENSLCRG00005010078 #31	RNF223 (ENSLCRG00005011444)	DENND2C (ENSLCRG00005011454)	ampd1 (ENSLCRG00005011483)	ENSLCRG00005012205	csde1 (ENSLCRG00005012246)	SIKE1 (ENSLCRG00005014547)	ENSLCRG00005014549	HTR6 (ENSLCRG00005014550)
Gilthead seabream	MODERN SPECIES	21	TTLL10 (ENSSAUG00010007248)	mib2 (ENSSAUG00010007270) #8	ubiad1 (ENSSAUG00010008360) #9	MMP23B (ENSSAUG00010008361) #10	cdk11b (ENSSAUG00010008413) #11	ENSSAUG00010011667	szrd1 (ENSSAUG00010011668) #12	atp13a2 (ENSSAUG00010011672) #13	SDHB (ENSSAUG00010011676) #14	ATAD3A (ENSSAUG00010011858) #15	TMEM240 (ENSSAUG00010012333) #17	otud3 (ENSSAUG00010012334) #18	bcas2 (ENSSAUG00010012335) #19	trim33 (ENSSAUG00010012391) #20	slc66a1 (ENSSAUG00010014109) #21	nr1h5 (ENSSAUG00010014116) #22	BRPF3 (ENSSAUG00010014119) #23	ENSSAUG00010014128 #24	ENSSAUG00010014134	ENSSAUG00010014137 #25	mtor (ENSSAUG00010014229) #27	angptl7 (ENSSAUG00010017945) #26	agrn (ENSSAUG00010018051) #30	ptpn11b (ENSSAUG00010021325) #31	RNF223 (ENSSAUG00010022415)	DENND2C (ENSSAUG00010022420)	ampd1 (ENSSAUG00010022440)	ENSSAUG00010023348	csde1 (ENSSAUG00010023384)	SIKE1 (ENSSAUG00010023472)	ENSSAUG00010023475