Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00940000160919 #7	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841 #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00730000111059.b #16	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #27	ENSGT00930000151037 #26	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30	ENSGT00950000182931.B.a.b #31	ENSGT00950000183011.c.a.a #32	ENSGT00950000182839.B.a.b #33	ENSGT00390000016950 #34	ENSGT00390000018003.a #35	ENSGT00940000168345 #36	ENSGT01010000222287.A #37
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00940000160919 #7	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841 #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00730000111059.b #16	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #27	ENSGT00930000151037 #26	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30	ENSGT00950000182931.B.a.b #31	ENSGT00950000183011.c.a.a #32	ENSGT00950000182839.B.a.b #33	ENSGT00390000016950 #34	ENSGT00390000018003.a #35	ENSGT00940000168345 #36	ENSGT01010000222287.A #37
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00940000160919 #7	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841 #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00730000111059.b #16	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #27	ENSGT00930000151037 #26	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30	ENSGT00950000182931.B.a.b #31	ENSGT00950000183011.c.a.a #32	ENSGT00950000182839.B.a.b #33	ENSGT00390000016950 #34	ENSGT00390000018003.a #35	ENSGT00940000168345 #36	ENSGT01010000222287.A #37
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00940000160919 #7	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841 #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00730000111059.b #16	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #27	ENSGT00930000151037 #26	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30	ENSGT00950000182931.B.a.b #31	ENSGT00950000183011.c.a.a #32	ENSGT00950000182839.B.a.b #33	ENSGT00390000016950 #34	ENSGT00390000018003.a #35	ENSGT00940000168345 #36	ENSGT01010000222287.A #37
Eupecaria_C	ANCESTRAL SPECIES	5	ENSGT00940000160919 #7	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841 #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00730000111059.b #16	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #27	ENSGT00930000151037 #26	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30	ENSGT00950000182931.B.a.b #31	ENSGT00950000183011.c.a.a #32	ENSGT00950000182839.B.a.b #33	ENSGT00390000016950 #34	ENSGT00390000018003.a #35	ENSGT00940000168345 #36	ENSGT01010000222287.A #37
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	20	ENSGT00940000160919 #7	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841 #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00730000111059.b #16	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #27	ENSGT00930000151037 #26	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30	ENSGT00950000182931.B.a.b #31	ENSGT00950000183011.c.a.a #32	ENSGT00950000182839.B.a.b #33	ENSGT00390000016950 #34	ENSGT00390000018003.a #35	ENSGT00940000168345 #36	ENSGT01010000222287.A #37
Large yellow croaker	MODERN SPECIES	487	TTLL10 (ENSLCRG00005022029) #7	mib2 (ENSLCRG00005000895) #8	ubiad1 (ENSLCRG00005004012) #9	MMP23B (ENSLCRG00005004013) #10	cdk11b (ENSLCRG00005004029) #11	ENSLCRG00005006490 #12	szrd1 (ENSLCRG00005006491) #13	atp13a2 (ENSLCRG00005006502) #14	SDHB (ENSLCRG00005006667) #15	ATAD3A (ENSLCRG00005006903) #16	TMEM240 (ENSLCRG00005006946) #17	otud3 (ENSLCRG00005006947) #18	bcas2 (ENSLCRG00005006950) #19	trim33 (ENSLCRG00005006953) #20	slc66a1 (ENSLCRG00005006958) #21	nr1h5 (ENSLCRG00005006959) #22	BRPF3 (ENSLCRG00005006963) #23	MAPK13 (ENSLCRG00005006968) #24	ENSLCRG00005006978 #25	mtor (ENSLCRG00005006997) #26	angptl7 (ENSLCRG00005007070) #27	agrn (ENSLCRG00005007112) #28	ENSLCRG00005010078 #29	RNF223 (ENSLCRG00005011444) #30	DENND2C (ENSLCRG00005011454) #31	ampd1 (ENSLCRG00005011483) #32	ENSLCRG00005012205 #33	csde1 (ENSLCRG00005012246) #34	SIKE1 (ENSLCRG00005014547) #35	ENSLCRG00005014549 #36	HTR6 (ENSLCRG00005014550) #37
European seabass	MODERN SPECIES	14	ENSDLAG00005010663	mib2 (ENSDLAG00005010729) #8	ubiad1 (ENSDLAG00005029746) #9	ENSDLAG00005012175 #10	cdk11b (ENSDLAG00005012222) #11	ENSDLAG00005033030 #12	szrd1 (ENSDLAG00005030755) #13	atp13a2 (ENSDLAG00005014127) #14	ENSDLAG00005016007 #15	ENSDLAG00005016300 #16	ENSDLAG00005026527 #17	ENSDLAG00005016579 #18	ENSDLAG00005030653 #19	trim33 (ENSDLAG00005016596) #20	slc66a1 (ENSDLAG00005016846) #21	nr1h5 (ENSDLAG00005016862) #22	ENSDLAG00005016886 #23	ENSDLAG00005016904 #24	ENSDLAG00005017053 #25	ENSDLAG00005034287 #26	ENSDLAG00005019287 #27	ENSDLAG00005019363 #28	ENSDLAG00005022089 #29	ENSDLAG00005034563 #30	DENND2C (ENSDLAG00005032504) #31	ENSDLAG00005022825 #32	ENSDLAG00005023188 #33	CSDE1 (ENSDLAG00005023227) #34	ENSDLAG00005031029 #35	ENSDLAG00005023929 #36	ENSDLAG00005033304 #37
Gilthead seabream	MODERN SPECIES	21	TTLL10 (ENSSAUG00010007248) #7	mib2 (ENSSAUG00010007270) #8	ubiad1 (ENSSAUG00010008360) #9	MMP23B (ENSSAUG00010008361) #10	cdk11b (ENSSAUG00010008413) #11	ENSSAUG00010011667 #12	szrd1 (ENSSAUG00010011668) #13	atp13a2 (ENSSAUG00010011672) #14	SDHB (ENSSAUG00010011676) #15	ATAD3A (ENSSAUG00010011858) #16	TMEM240 (ENSSAUG00010012333) #17	otud3 (ENSSAUG00010012334) #18	bcas2 (ENSSAUG00010012335) #19	trim33 (ENSSAUG00010012391) #20	slc66a1 (ENSSAUG00010014109) #21	nr1h5 (ENSSAUG00010014116) #22	BRPF3 (ENSSAUG00010014119) #23	ENSSAUG00010014128 #24	ENSSAUG00010014134	ENSSAUG00010014137 #25	mtor (ENSSAUG00010014229) #26	angptl7 (ENSSAUG00010017945) #27	agrn (ENSSAUG00010018051) #28	ptpn11b (ENSSAUG00010021325) #29	RNF223 (ENSSAUG00010022415) #30	DENND2C (ENSSAUG00010022420) #31	ampd1 (ENSSAUG00010022440) #32	ENSSAUG00010023348 #33	csde1 (ENSSAUG00010023384) #34	SIKE1 (ENSSAUG00010023472) #35	ENSSAUG00010023475 #36
Perciformes	ANCESTRAL SPECIES	4	ENSGT00940000160919 #7	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841 #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00730000111059.b #16	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #27	ENSGT00930000151037 #26	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30	ENSGT00950000182931.B.a.b #31	ENSGT00950000183011.c.a.a #32	ENSGT00950000182839.B.a.b #33	ENSGT00390000016950 #34	ENSGT00390000018003.a #35	ENSGT00940000168345 #36	ENSGT01010000222287.A #37
Cottioidei	ANCESTRAL SPECIES	2	ENSGT00940000160919 #7	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841 #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00730000111059.b #16	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #27	ENSGT00930000151037 #26	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30	ENSGT00940000161154.b	ENSGT01050000244850.A.b.a.b	ENSGT00390000000903.b.b	ENSGT00940000167073	ENSGT00940000163428.a.a.b	ENSGT00940000159065.a	ENSGT00940000155473.c.a
Stickleback	MODERN SPECIES	11	ENSGACG00000005216	mib2 (ENSGACG00000005209) #8	ubiad1 (ENSGACG00000005205) #9	MMP23B (ENSGACG00000005198) #10	cdk11b (ENSGACG00000005177) #11	szrd1 (ENSGACG00000005166) #13	atp13a2 (ENSGACG00000005124) #14	SDHB (ENSGACG00000005072) #15	ATAD3A (ENSGACG00000005036) #16	ENSGACG00000005033	TMEM240 (ENSGACG00000005027) #17	otud3 (ENSGACG00000005021) #18	bcas2 (ENSGACG00000004981) #19	trim33 (ENSGACG00000004973) #20	slc66a1 (ENSGACG00000004944) #21	nr1h5 (ENSGACG00000004938) #22	BRPF3 (ENSGACG00000004924) #23	MAPK13 (ENSGACG00000004911) #24	ENSGACG00000004910 #25	angptl7 (ENSGACG00000004901) #27	mtor (ENSGACG00000004869) #26	ENSGACG00000004864	ENSGACG00000004861	agrn (ENSGACG00000004839) #28	ptpn11b (ENSGACG00000004807) #29	CHST13 (ENSGACG00000004801)	PLXNA1 (ENSGACG00000004780)	ENSGACG00000004778	ENSGACG00000004776	twist3 (ENSGACG00000004773)	VDR (ENSGACG00000004763)
Lumpfish	MODERN SPECIES	22	ENSCLMG00005016266	mib2 (ENSCLMG00005014140) #8	ubiad1 (ENSCLMG00005014130) #9	MMP23B (ENSCLMG00005014128) #10	cdk11b (ENSCLMG00005010941) #11	ENSCLMG00005010912 #12	szrd1 (ENSCLMG00005010908) #13	atp13a2 (ENSCLMG00005010814) #14	SDHB (ENSCLMG00005010609) #15	ATAD3A (ENSCLMG00005010599) #16	ENSCLMG00005010592 #17	otud3 (ENSCLMG00005010589) #18	bcas2 (ENSCLMG00005010587) #19	trim33 (ENSCLMG00005010526) #20	slc66a1 (ENSCLMG00005010524) #21	nr1h5 (ENSCLMG00005010508) #22	BRPF3 (ENSCLMG00005010506) #23	ENSCLMG00005010485 #24	ENSCLMG00005010483 #25	angptl7 (ENSCLMG00005010480) #27	mtor (ENSCLMG00005007384) #26	agrn (ENSCLMG00005000370) #28	ptpn11b (ENSCLMG00005000196) #29	RNF223 (ENSCLMG00005000189) #30	CHST13 (ENSCLMG00005000184)	ENSCLMG00005000178	PLXNA1 (ENSCLMG00005000154)	chchd6a (ENSCLMG00005000119)	ENSCLMG00005000106	ENSCLMG00005000091	ENSCLMG00005000067
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00940000160919 #7	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841 #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00730000111059.b #16	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #27	ENSGT00930000151037 #26	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30	ENSGT00950000182931.B.a.b #31	ENSGT00950000183011.c.a.a #32	ENSGT00950000182839.B.a.b #33	ENSGT00390000016950 #34	ENSGT00390000018003.a #35	ENSGT00940000168345 #36	ENSGT01010000222287.A #37
Channel bull blenny	MODERN SPECIES	21	TTLL10 (ENSCGOG00000007798) #7	mib2 (ENSCGOG00000007809) #8	ubiad1 (ENSCGOG00000007922) #9	MMP23B (ENSCGOG00000007923) #10	cdk11b (ENSCGOG00000007934) #11	ENSCGOG00000008057 #12	szrd1 (ENSCGOG00000008063) #13	atp13a2 (ENSCGOG00000008065) #14	SDHB (ENSCGOG00000008150) #15	ATAD3A (ENSCGOG00000008682) #16	TMEM240 (ENSCGOG00000009486) #17	otud3 (ENSCGOG00000009496) #18	bcas2 (ENSCGOG00000009515) #19	trim33 (ENSCGOG00000009637) #20	slc66a1 (ENSCGOG00000010822) #21	nr1h5 (ENSCGOG00000010825) #22	BRPF3 (ENSCGOG00000010830) #23	MAPK13 (ENSCGOG00000010850) #24	ENSCGOG00000011077 #25	mtor (ENSCGOG00000011183) #26	angptl7 (ENSCGOG00000014940) #27	agrn (ENSCGOG00000014988) #28	ptpn11b (ENSCGOG00000016909) #29	RNF223 (ENSCGOG00000017557) #30	DENND2C (ENSCGOG00000017560) #31	ampd1 (ENSCGOG00000017617) #32	ENSCGOG00000018979 #33	csde1 (ENSCGOG00000019005) #34	SIKE1 (ENSCGOG00000020182) #35	ENSCGOG00000020185 #36	HTR6 (ENSCGOG00000020186) #37
Pike perch	MODERN SPECIES	7	TTLL10 (ENSSLUG00000001258) #7	mib2 (ENSSLUG00000000981) #8	ubiad1 (ENSSLUG00000000885) #9	MMP23B (ENSSLUG00000000879) #10	cdk11b (ENSSLUG00000000718) #11	ENSSLUG00000000660 #12	szrd1 (ENSSLUG00000000656) #13	atp13a2 (ENSSLUG00000000385) #14	SDHB (ENSSLUG00000000241) #15	ENSSLUG00000000201 #16	TMEM240 (ENSSLUG00000000166) #17	otud3 (ENSSLUG00000000162) #18	bcas2 (ENSSLUG00000025821) #19	trim33 (ENSSLUG00000025816) #20	slc66a1 (ENSSLUG00000025813) #21	nr1h5 (ENSSLUG00000025811) #22	BRPF3 (ENSSLUG00000025809) #23	MAPK13 (ENSSLUG00000025806) #24	ENSSLUG00000025800 #25	angptl7 (ENSSLUG00000025795) #27	mtor (ENSSLUG00000025759) #26	agrn (ENSSLUG00000025665) #28	ptpn11b (ENSSLUG00000025566) #29	RNF223 (ENSSLUG00000025560) #30	DENND2C (ENSSLUG00000025554) #31	ampd1 (ENSSLUG00000025520) #32	ENSSLUG00000025478 #33	csde1 (ENSSLUG00000025415) #34	SIKE1 (ENSSLUG00000025370) #35	ENSSLUG00000025369 #36	ENSSLUG00000025368
Ballan wrasse	MODERN SPECIES	83														trim33 (ENSLBEG00000013662) #20	slc66a1 (ENSLBEG00000013762) #21	nr1h5 (ENSLBEG00000013800) #22	BRPF3 (ENSLBEG00000013860) #23	ENSLBEG00000013938 #24	ENSLBEG00000014017 #25	mtor (ENSLBEG00000014115) #26	angptl7 (ENSLBEG00000014222) #27	agrn (ENSLBEG00000014305) #28	ptpn11b (ENSLBEG00000014479) #29	RNF223 (ENSLBEG00000014526) #30	DENND2C (ENSLBEG00000014549) #31	ampd1 (ENSLBEG00000014590) #32	ENSLBEG00000014652 #33	csde1 (ENSLBEG00000014770) #34	SIKE1 (ENSLBEG00000014938) #35	ENSLBEG00000014975 #36	HTR6 (ENSLBEG00000015013) #37
Tetraodontidae	ANCESTRAL SPECIES	38	ENSGT00940000169158	ENSGT00940000160919 #7	ENSGT00940000158097.d #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841 #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00930000151037.j.b #26	ENSGT00940000157064.a.a #27	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30	ENSGT00950000182931.B.a.b #31	ENSGT00950000183011.c.a.a #32	ENSGT00950000182839.B.a.b #33	ENSGT00390000016950 #34	ENSGT00390000018003.a #35	ENSGT00940000168345 #36	ENSGT01010000222287.A #37
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	26	ENSTNIG00000003471	rab2a (ENSTNIG00000003472)	ppp2r1bb (ENSTNIG00000003473)	med29 (ENSTNIG00000003474)	mlf1 (ENSTNIG00000003475)	pex10 (ENSTNIG00000003476)	plch2a (ENSTNIG00000003477)	tpi1b (ENSTNIG00000003478)	ENSTNIG00000003479	ENSTNIG00000003480	RAB26 (ENSTNIG00000003481)	laptm4b (ENSTNIG00000003482)	rpl30 (ENSTNIG00000000674)	ENSTNIG00000003483	ENSTNIG00000005199	nr1h5 (ENSTNIG00000003487) #22	ENSTNIG00000003488 #23	gdap1 (ENSTNIG00000003490)	ENSTNIG00000004489	ARHGEF37 (ENSTNIG00000000375)	ENSTNIG00000003493	ENSTNIG00000003494	RIMBP2 (ENSTNIG00000003495)	ENSTNIG00000003496	ENSTNIG00000003497	ube2g1b (ENSTNIG00000003498)	arpc3 (ENSTNIG00000003499)	gpn3 (ENSTNIG00000003500)	rnf170 (ENSTNIG00000003501)	HOOK3 (ENSTNIG00000003502)	tmed4 (ENSTNIG00000003504)
Tetraodon	MODERN SPECIES	26	ENSTNIG00000004229	slc4a1a (ENSTNIG00000004273)	MIEN1 (ENSTNIG00000004221)	ENSTNIG00000004220	nhp2 (ENSTNIG00000004219)	ENSTNIG00000000669	ENSTNIG00000001509	ttl (ENSTNIG00000004207)	ezh2 (ENSTNIG00000002191)	ssr1 (ENSTNIG00000003328)	ENSTNIG00000000820	ENSTNIG00000004199	ENSTNIG00000004198	trim33 (ENSTNIG00000004197) #20	slc66a1 (ENSTNIG00000004196) #21	nr1h5 (ENSTNIG00000004195) #22	ENSTNIG00000004194 #23	TAAR1 (ENSTNIG00000000404)	stard10 (ENSTNIG00000004193)	ENSTNIG00000002324	LONRF1 (ENSTNIG00000004186)	hdlbpa (ENSTNIG00000004185)	ccm2 (ENSTNIG00000004176)	fam167ab (ENSTNIG00000000402)	sh3bgrl2 (ENSTNIG00000001189)	ENSTNIG00000004175	setd7 (ENSTNIG00000004161)	fignl1 (ENSTNIG00000004160)	ikzf1 (ENSTNIG00000004159)	nr2f1a (ENSTNIG00000004157)	loxl5b (ENSTNIG00000000510)
Fugu	MODERN SPECIES	15	ENSTRUG00000030658	TTLL10 (ENSTRUG00000019857) #7	mib2 (ENSTRUG00000005595) #8	ubiad1 (ENSTRUG00000021990) #9	MMP23B (ENSTRUG00000005977) #10	cdk11b (ENSTRUG00000006073) #11	ENSTRUG00000019835 #12	szrd1 (ENSTRUG00000006423) #13	atp13a2 (ENSTRUG00000006519) #14	SDHB (ENSTRUG00000007176) #15	TMEM240 (ENSTRUG00000025742) #17	otud3 (ENSTRUG00000007307) #18	bcas2 (ENSTRUG00000024633) #19	trim33 (ENSTRUG00000007557) #20	slc66a1 (ENSTRUG00000008043) #21	nr1h5 (ENSTRUG00000008191) #22	BRPF3 (ENSTRUG00000008374) #23	MAPK13 (ENSTRUG00000008627) #24	ENSTRUG00000026485	ENSTRUG00000023464 #25	mtor (ENSTRUG00000009031) #26	angptl7 (ENSTRUG00000009793) #27	agrn (ENSTRUG00000006249) #28	ptpn11b (ENSTRUG00000006764) #29	RNF223 (ENSTRUG00000020331) #30	DENND2C (ENSTRUG00000007448) #31	ampd1 (ENSTRUG00000007552) #32	ENSTRUG00000031631 #33	csde1 (ENSTRUG00000007996) #34	sike1 (ENSTRUG00000030693) #35	ENSTRUG00000008412 #36
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00940000160919 #7	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841 #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00730000111059.b #16	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00930000151037 #26	ENSGT00940000157064.a.a #27	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30	ENSGT00950000182931.B.a.b #31	ENSGT00950000183011.c.a.a #32	ENSGT00950000182839.B.a.b #33	ENSGT00390000016950 #34	ENSGT00390000018003.a #35	ENSGT00940000168345 #36	ENSGT01010000222287.A #37
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00940000169158	ENSGT00940000160919 #7	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841 #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #27	ENSGT00930000151037 #26	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30	ENSGT00950000182931.B.a.b #31	ENSGT00950000183011.c.a.a #32	ENSGT00950000182839.B.a.b #33	ENSGT00390000016950 #34	ENSGT00390000018003.a #35	ENSGT00940000168345 #36	ENSGT00940000164988
Anabantoidei	ANCESTRAL SPECIES	2	ENSGT00940000169158	ENSGT00940000160919 #7	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841 #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #27	ENSGT00930000151037 #26	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30	ENSGT00950000182931.B.a.b #31	ENSGT00950000183011.c.a.a #32	ENSGT00950000182839.B.a.b #33	ENSGT00390000016950 #34	ENSGT00390000018003.a #35	ENSGT00940000168345 #36	ENSGT00940000154484.A
Climbing perch	MODERN SPECIES	20	ENSATEG00000005169	ENSATEG00000005159 #7	mib2 (ENSATEG00000005118) #8	ubiad1 (ENSATEG00000026486) #9	ENSATEG00000005073 #10	cdk11b (ENSATEG00000005002) #11	ENSATEG00000004960 #12	szrd1 (ENSATEG00000027903) #13	atp13a2 (ENSATEG00000004898) #14	ENSATEG00000004854 #15	ENSATEG00000029392 #17	ENSATEG00000004825 #18	ENSATEG00000026999 #19	trim33 (ENSATEG00000004717) #20	slc66a1 (ENSATEG00000004697) #21	nr1h5 (ENSATEG00000004649) #22	ENSATEG00000004586 #23	ENSATEG00000004520 #24	ENSATEG00000004494 #25	ENSATEG00000004456 #27	ENSATEG00000004175 #26	ENSATEG00000004139 #28	ENSATEG00000004060 #29	ENSATEG00000004040 #30	DENND2C (ENSATEG00000004030) #31	ENSATEG00000003961 #32	ENSATEG00000029204 #33	CSDE1 (ENSATEG00000003864) #34	ENSATEG00000003841 #35	ENSATEG00000003796 #36	ENSATEG00000026807
Siamese fighting fish	MODERN SPECIES	18	ARHGEF19 (ENSBSLG00000003099)	ENSBSLG00000003585	TTLL10 (ENSBSLG00000003608) #7	mib2 (ENSBSLG00000004064) #8	ubiad1 (ENSBSLG00000004732) #9	MMP23B (ENSBSLG00000004757) #10	cdk11b (ENSBSLG00000005431) #11	ENSBSLG00000006563	szrd1 (ENSBSLG00000006588) #13	atp13a2 (ENSBSLG00000006876) #14	TMEM240 (ENSBSLG00000007724) #17	otud3 (ENSBSLG00000007756) #18	bcas2 (ENSBSLG00000007797) #19	trim33 (ENSBSLG00000007990) #20	slc66a1 (ENSBSLG00000009440) #21	nr1h5 (ENSBSLG00000009457) #22	BRPF3 (ENSBSLG00000009470) #23	MAPK13 (ENSBSLG00000009510) #24	ENSBSLG00000010242 #25	mtor (ENSBSLG00000010259) #26	angptl7 (ENSBSLG00000010382) #27	agrn (ENSBSLG00000010997) #28	ENSBSLG00000013935	ptpn11b (ENSBSLG00000014153) #29	RNF223 (ENSBSLG00000014746) #30	DENND2C (ENSBSLG00000014757) #31	ampd1 (ENSBSLG00000014875) #32	ENSBSLG00000016455 #33	csde1 (ENSBSLG00000016489) #34	SIKE1 (ENSBSLG00000019070) #35	ENSBSLG00000019084 #36
Zig-zag eel	MODERN SPECIES	21	ENSMAMG00000014220	ENSMAMG00000014186	ENSMAMG00000014134 #7	mib2 (ENSMAMG00000014100) #8	ubiad1 (ENSMAMG00000014083) #9	ENSMAMG00000014069 #10	cdk11b (ENSMAMG00000013969) #11	ENSMAMG00000013947 #12	szrd1 (ENSMAMG00000013944) #13	ENSMAMG00000013910 #14	ENSMAMG00000013884 #17	ENSMAMG00000013878 #18	ENSMAMG00000025896 #19	trim33 (ENSMAMG00000013717) #20	slc66a1 (ENSMAMG00000013644) #21	nr1h5 (ENSMAMG00000013617) #22	ENSMAMG00000013600 #23	ENSMAMG00000013549 #24	ENSMAMG00000026120 #25	ENSMAMG00000013521 #27	ENSMAMG00000013377 #26	ENSMAMG00000013283 #28	ENSMAMG00000013236 #29	ENSMAMG00000013221 #30	DENND2C (ENSMAMG00000013134) #31	ENSMAMG00000008994 #32	ENSMAMG00000028707 #33	CSDE1 (ENSMAMG00000008821) #34	ENSMAMG00000008805 #35	ENSMAMG00000026350 #36	ENSMAMG00000008762
Carangaria	ANCESTRAL SPECIES	2	ENSGT00940000160919 #7	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841 #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00730000111059.b #16	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00930000151037 #26	ENSGT00940000157064.a.a #27	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30	ENSGT00950000182931.B.a.b #31	ENSGT00950000183011.c.a.a #32	ENSGT00950000182839.B.a.b #33	ENSGT00390000016950 #34	ENSGT00390000018003.a #35	ENSGT00940000168345 #36	ENSGT01010000222287.A #37
Pleuronectoidei	ANCESTRAL SPECIES	14	ENSGT00940000169158	ENSGT00940000160919 #7	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841 #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00930000151037 #26	ENSGT00940000157064.a.a #27	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30	ENSGT00950000182931.B.a.b #31	ENSGT00950000183011.c.a.a #32	ENSGT00950000182839.B.a.b #33	ENSGT00390000016950 #34	ENSGT00390000018003.a #35	ENSGT00940000168345 #36	ENSGT01010000222287.A #37
Turbot	MODERN SPECIES	2	ENSSMAG00000006970	vwa1 (ENSSMAG00000007138)	ENSSMAG00000007146	ENSSMAG00000007162	ENSSMAG00000033188 #36	ENSSMAG00000007182 #35	ENSSMAG00000007203 #34	szrd1 (ENSSMAG00000007430) #13	atp13a2 (ENSSMAG00000007454) #14	ENSSMAG00000007477 #15	ENSSMAG00000007493 #17	ENSSMAG00000007504 #18	ENSSMAG00000036720 #19	trim33 (ENSSMAG00000007543) #20	slc66a1 (ENSSMAG00000007573) #21	nr1h5 (ENSSMAG00000007598) #22	ENSSMAG00000007646 #23	ENSSMAG00000007696 #24	ENSSMAG00000037374 #25	ENSSMAG00000007774 #26	ENSSMAG00000007890 #27	ENSSMAG00000007923 #28	ENSSMAG00000008107 #29	ENSSMAG00000008165 #30	ENSSMAG00000008172 #31	ENSSMAG00000008196 #32	ENSSMAG00000036974 #33	ENSSMAG00000025199 #12	cdk11b (ENSSMAG00000008291) #11	ENSSMAG00000008352 #10	ubiad1 (ENSSMAG00000008362) #9
Tongue sole	MODERN SPECIES	1	ENSCSEG00000005104	SLC7A5 (ENSCSEG00000005095)	RNF223 (ENSCSEG00000005091) #30	ptpn11b (ENSCSEG00000005082) #29	agrn (ENSCSEG00000005060) #28	angptl7 (ENSCSEG00000005058) #27	mtor (ENSCSEG00000005040) #26	ENSCSEG00000005036 #25	ENSCSEG00000005028 #24	BRPF3 (ENSCSEG00000005002) #23	TMEM240 (ENSCSEG00000004992) #17	otud3 (ENSCSEG00000004985) #18	bcas2 (ENSCSEG00000004980) #19	trim33 (ENSCSEG00000004968) #20	slc66a1 (ENSCSEG00000004961) #21	nr1h5 (ENSCSEG00000004953) #22	atp13a2 (ENSCSEG00000004931) #14	szrd1 (ENSCSEG00000004927) #13	ENSCSEG00000004922 #12	cdk11b (ENSCSEG00000004901) #11	MMP23B (ENSCSEG00000004897) #10	ubiad1 (ENSCSEG00000004896) #9	mib2 (ENSCSEG00000004890) #8	ENSCSEG00000004879 #7	ENSCSEG00000004878	ENSCSEG00000004866	klf15 (ENSCSEG00000004864)	CPNE9 (ENSCSEG00000004858)	slc2a1a (ENSCSEG00000004852)	slc38a5b (ENSCSEG00000004849)	ccdc22 (ENSCSEG00000004843)
Carangaria_A	ANCESTRAL SPECIES	1	ENSGT00940000160919 #7	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841 #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00730000111059.b #16	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00930000151037 #26	ENSGT00940000157064.a.a #27	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30	ENSGT00950000182931.B.a.b #31	ENSGT00950000183011.c.a.a #32	ENSGT00950000182839.B.a.b #33	ENSGT00390000016950 #34	ENSGT00390000018003.a #35	ENSGT00940000168345 #36	ENSGT01010000222287.A #37
Barramundi perch	MODERN SPECIES	62	TTLL10 (ENSLCAG00010001296) #7	mib2 (ENSLCAG00010001310) #8	ubiad1 (ENSLCAG00010001331) #9	MMP23B (ENSLCAG00010001335) #10	cdk11b (ENSLCAG00010001351) #11	ENSLCAG00010001412 #12	szrd1 (ENSLCAG00010001418) #13	atp13a2 (ENSLCAG00010001462) #14	SDHB (ENSLCAG00010001559) #15	ATAD3A (ENSLCAG00010001605) #16	TMEM240 (ENSLCAG00010001614) #17	otud3 (ENSLCAG00010001619) #18	bcas2 (ENSLCAG00010001629) #19	trim33 (ENSLCAG00010001694) #20	slc66a1 (ENSLCAG00010002014) #21	nr1h5 (ENSLCAG00010002039) #22	BRPF3 (ENSLCAG00010002050) #23	MAPK13 (ENSLCAG00010002062) #24	ENSLCAG00010002068 #25	mtor (ENSLCAG00010002119) #26	angptl7 (ENSLCAG00010002213) #27	agrn (ENSLCAG00010002519) #28	ENSLCAG00010003921 #29	RNF223 (ENSLCAG00010004007) #30	ENSLCAG00010004010 #31	ENSLCAG00010004013 #31	ampd1 (ENSLCAG00010004138) #32	ENSLCAG00010004648 #33	csde1 (ENSLCAG00010004839) #34	SIKE1 (ENSLCAG00010005854) #35	ENSLCAG00010005858 #36
Seriola	ANCESTRAL SPECIES	103	ENSGT01030000234571.b.b.b.a.b	ENSGT00940000160919 #7	ENSGT00940000158097 #8	ENSGT00390000012439 #9	ENSGT00940000161187 #10	ENSGT00940000158459 #11	ENSGT01030000234841.c #12	ENSGT00390000005532.l #13	ENSGT00940000159714 #14	ENSGT00390000013558.a.b #15	ENSGT00400000023987.d #17	ENSGT00390000016392 #18	ENSGT00390000014494 #19	ENSGT00940000156361.B #20	ENSGT00390000003344 #21	ENSGT00940000166498 #22	ENSGT00940000155056.a #23	ENSGT00940000159584 #24	ENSGT00940000160682.a #25	ENSGT00940000157064.a.a #27	ENSGT00930000151037 #26	ENSGT00940000158337 #28	ENSGT00940000153876.A #29	ENSGT00940000163259.b #30
Greater amberjack	MODERN SPECIES	74	ARHGEF19 (ENSSDUG00000003111)	TTLL10 (ENSSDUG00000003074) #7	mib2 (ENSSDUG00000003005) #8	ubiad1 (ENSSDUG00000002981) #9	MMP23B (ENSSDUG00000002961) #10	cdk11b (ENSSDUG00000002908) #11	ENSSDUG00000002895 #12	szrd1 (ENSSDUG00000002888) #13	atp13a2 (ENSSDUG00000002851) #14	SDHB (ENSSDUG00000002824) #15	TMEM240 (ENSSDUG00000002804) #17	otud3 (ENSSDUG00000002795) #18	bcas2 (ENSSDUG00000002743) #19	trim33 (ENSSDUG00000002633) #20	slc66a1 (ENSSDUG00000002582) #21	nr1h5 (ENSSDUG00000002490) #22	BRPF3 (ENSSDUG00000002454) #23	MAPK13 (ENSSDUG00000002391) #24	ENSSDUG00000002373 #25	angptl7 (ENSSDUG00000002355) #27	mtor (ENSSDUG00000002035) #26	ENSSDUG00000001964	ENSSDUG00000001946	ENSSDUG00000001928	agrn (ENSSDUG00000001803) #28	ptpn11b (ENSSDUG00000001746) #29	RNF223 (ENSSDUG00000001721) #30
Yellowtail amberjack	MODERN SPECIES	2238		TTLL10 (ENSSLDG00000011010) #7	mib2 (ENSSLDG00000010879) #8	ubiad1 (ENSSLDG00000010827) #9	MMP23B (ENSSLDG00000010797) #10	cdk11b (ENSSLDG00000010713) #11	ENSSLDG00000010663 #12	szrd1 (ENSSLDG00000010648) #13	atp13a2 (ENSSLDG00000010408) #14	SDHB (ENSSLDG00000010313) #15	TMEM240 (ENSSLDG00000010282) #17	otud3 (ENSSLDG00000010258) #18	bcas2 (ENSSLDG00000010229) #19	trim33 (ENSSLDG00000010180) #20	slc66a1 (ENSSLDG00000010140) #21	nr1h5 (ENSSLDG00000010118) #22	BRPF3 (ENSSLDG00000010069) #23	MAPK13 (ENSSLDG00000010007) #24